Citrus Sinensis ID: 024145

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270--
Protein Sequence
MNGPSSAAPFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVVNPTVMRAYGLIK
Secondary Structure (PSIPRED)
ccccccccccccccccEEEEcccccHHHHHHHHHHHHcccEEEEEEcccHHHHHHHHHHcccEEEEEcccccHHHHHHHHHHHHHHcccccEEEEccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEcccHHHHcccccccHHHHHHHHHHHHHHHHHHHHcccccEEEccccccccccccccccccHHHHHHHHHHccccccccccHHHHHHHHHHHHccccccccccEEEEcccccccccHHHHHHcccc
Secondary Structure Prediction (SSPRO)
cccccccccHHcccccEEEEEccccHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHHcccEEEEEcccccHHHHHHHHHHHHHHHccccEEEEcccccccccEccccccHHHHHHHHHHHcHHHHHHHHHHHHHHHHHccEEEEEEccHHHccEcccEHHHHHHHHHHHHHHHHHHHHHHHHcEEEEEEEEccEcccccHcccHHHHHHHHHHHHccccHcccccHHHHHHHHHHHHcHHHccccccEEEEcccccEEccHHHEEEEccc
Coil and Loop (DISEMBL)
mngpssaapfkrleGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKlgqdvcyihcdisnedeVINLVDTAVSkfgkldimynnagildrsfgsildtpksdlERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTeiaglgspaytiskYGILGLVKCLAAELGQygirvncvspyglatgmsmkggvdpalIESSMSQMGNLKGEFLKTDGIANAALYLasdessyvsgqnlvvdggfsvvnptVMRAYGLIK
Flexible Loop (DISEMBL)
mngpssaapfkrLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVvdggfsvvnptvmrayglik
Low Complexity Region (SEG)
MNGPSSAAPFKRLEGKVaiitggasgigamaVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVVNPTVMRAYGLIK
Disordered region (IsUnstruct)
************LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALI********NLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVVNPTVMRAYGL**
Disordered Region (DISOPRED)
************LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGG***********QMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVVNPTVMRAYGLIK
Disordered Region (DISEMBL)
********PFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVVNPTVMRAYGLIK
Disordered Region (DISPRO)
**********KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVVNPTVMRAYGLIK
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MNGPSSAAPFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVVNPTVMRAYGLIK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	272	2.2.26 [Sep-21-2011]
Q94K41	257	Short-chain dehydrogenase	yes	no	0.922	0.976	0.529	3e-66
F1SWA0	267	Zerumbone synthase OS=Zin	N/A	no	0.911	0.928	0.486	1e-63
Q7FAE1	274	Momilactone A synthase OS	yes	no	0.944	0.937	0.523	1e-62
O80713	257	Short-chain dehydrogenase	no	no	0.919	0.972	0.501	3e-61
F4J2Z7	298	Short-chain dehydrogenase	no	no	0.911	0.832	0.515	1e-60
Q9SCU0	303	Short-chain dehydrogenase	no	no	0.933	0.838	0.485	5e-59
F4J300	259	Short-chain dehydrogenase	no	no	0.926	0.972	0.490	3e-57
O80714	258	Short-chain dehydrogenase	no	no	0.919	0.968	0.480	4e-57
Q9C826	285	Xanthoxin dehydrogenase O	no	no	0.930	0.887	0.452	4e-55
P50160	336	Sex determination protein	N/A	no	0.911	0.738	0.442	5e-52

>sp|Q94K41|SDR3B_ARATH Short-chain dehydrogenase reductase 3b OS=Arabidopsis thaliana GN=SDR3b PE=2 SV=1

 Score =  252 bits (643), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 135/255 (52%), Positives = 181/255 (70%), Gaps = 4/255 (1%)

Query: 11  KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQD-VCYIHCD 69
           KRL+GK+ IITGGASGIGA +V LF E+GA+VVI DVQD+LG+++A  +G+D   Y HCD
Sbjct: 4   KRLDGKIVIITGGASGIGAESVRLFTEHGARVVIVDVQDELGQNVAVSIGEDKASYYHCD 63

Query: 70  ISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLG 129
           ++NE EV N V   V K+GKLD++++NAG+++  F SILD   ++L+R I +N  G    
Sbjct: 64  VTNETEVENAVKFTVEKYGKLDVLFSNAGVIE-PFVSILDLNLNELDRTIAINLRGTAAF 122

Query: 130 AKHAARVMVPQQ-KGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRV 188
            KHAAR MV +  +G I+ T S   EIAG     YT SK+G+LGL+K  +  LG+YGIRV
Sbjct: 123 IKHAARAMVEKGIRGSIVCTTSVAAEIAGTAPHGYTTSKHGLLGLIKSASGGLGKYGIRV 182

Query: 189 NCVSPYGLATGMSMKG-GVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVS 247
           N V+P+G+AT +   G  ++P ++E + S   NLKG  LK   +A AAL+LASDES+YVS
Sbjct: 183 NGVAPFGVATPLVCNGFKMEPNVVEQNTSASANLKGIVLKARHVAEAALFLASDESAYVS 242

Query: 248 GQNLVVDGGFSVVNP 262
           GQNL VDGG+SVV P
Sbjct: 243 GQNLAVDGGYSVVKP 257

Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: -

>sp|F1SWA0|ZERSY_ZINZE Zerumbone synthase OS=Zingiber zerumbet GN=ZSD1 PE=1 SV=1

 Score =  243 bits (619), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 130/267 (48%), Positives = 173/267 (64%), Gaps = 19/267 (7%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQD--VCYIHCD 69
           RLEGKVA++TGGASGIG     LF E+GAK+ I DVQD+LG+ ++ +LG D   CY HCD
Sbjct: 2   RLEGKVALVTGGASGIGESIARLFIEHGAKICIVDVQDELGQQVSQRLGGDPHACYFHCD 61

Query: 70  ISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLG 129
           ++ ED+V   VD    K+G +DIM NNAGI       I D   ++ +++ ++N  G FLG
Sbjct: 62  VTVEDDVRRAVDFTAEKYGTIDIMVNNAGITGDKVIDIRDADFNEFKKVFDINVNGVFLG 121

Query: 130 AKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVN 189
            KHAAR+M+P+ KG I+  AS  + IAG G   YT +K+ ++GL K +AAELG++GIRVN
Sbjct: 122 MKHAARIMIPKMKGSIVSLASVSSVIAGAGPHGYTGAKHAVVGLTKSVAAELGRHGIRVN 181

Query: 190 CVSPYGLATGMSMKGGVDPALIESSMSQ------------MGNLKGEFLKTDGIANAALY 237
           CVSPY + T +SM     P L ES M +              NLKG  L  + +A A LY
Sbjct: 182 CVSPYAVPTRLSM-----PYLPESEMQEDALRGFLTFVRSNANLKGVDLMPNDVAEAVLY 236

Query: 238 LASDESSYVSGQNLVVDGGFSVVNPTV 264
           LA++ES YVSG NLV+DGGFS+ N T+
Sbjct: 237 LATEESKYVSGLNLVIDGGFSIANHTL 263

Catalyzes 8-hydroxy-alpha-humulene into zerumbone in presence of NAD. Also converts borneol to camphor in vitro. Zerumbone is a highly promising multi-anticancer agent.

Zingiber zerumbet (taxid: 311405)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 2

EC: 6

>sp|Q7FAE1|MOMAS_ORYSJ Momilactone A synthase OS=Oryza sativa subsp. japonica GN=Os04g0179200 PE=2 SV=1

 Score =  240 bits (612), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 136/260 (52%), Positives = 182/260 (70%), Gaps = 3/260 (1%)

Query: 7   AAPFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVC-Y 65
           +A  ++L GKVA+ITGGASGIGA    LF ++GA+VV+AD+QD+LG  L  +LG D   Y
Sbjct: 9   SADARKLVGKVAVITGGASGIGACTARLFVKHGARVVVADIQDELGASLVAELGPDASSY 68

Query: 66  IHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIG 125
           +HCD++NE +V   VD AV++FGKLD+M+NNAG+       + +  K D ER++ VN +G
Sbjct: 69  VHCDVTNEGDVAAAVDHAVARFGKLDVMFNNAGVSGPPCFRMSECTKEDFERVLAVNLVG 128

Query: 126 GFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYG 185
            FLG KHAARVM P ++G I+ TAS  + ++G  S AYT SK+ ++G  +  A ELG++G
Sbjct: 129 PFLGTKHAARVMAPARRGSIISTASLSSSVSGAASHAYTTSKHALVGFTENAAGELGRHG 188

Query: 186 IRVNCVSPYGLATGMSMKG-GVDPALIESSMSQMGNLKGE-FLKTDGIANAALYLASDES 243
           IRVNCVSP G+AT ++    G+D   IE+ M+   NLKG   LK D IA AAL+LASD+ 
Sbjct: 189 IRVNCVSPAGVATPLARAAMGMDDEAIEAIMANSANLKGAGALKADDIAAAALFLASDDG 248

Query: 244 SYVSGQNLVVDGGFSVVNPT 263
            YVSGQNL VDGG SVVN +
Sbjct: 249 RYVSGQNLRVDGGLSVVNSS 268

Involved in momilactone phytoalexins biosynthesis. Catalyzes the last step of momilactone A biosynthesis.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 9

EC: 5

>sp|O80713|SDR3A_ARATH Short-chain dehydrogenase reductase 3a OS=Arabidopsis thaliana GN=SDR3a PE=2 SV=1

 Score =  234 bits (598), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 127/253 (50%), Positives = 172/253 (67%), Gaps = 3/253 (1%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQD-VCYIHCDI 70
           RL+GK+AIITGGASGIGA AV LF ++GAKVVI D Q++LG+++A  +G+D   +  CD+
Sbjct: 5   RLDGKIAIITGGASGIGAEAVRLFTDHGAKVVIVDFQEELGQNVAVSVGKDKASFYRCDV 64

Query: 71  SNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGA 130
           +NE EV N V   V K+GKLD++++NAG++++  GS LD      +R + VN  G     
Sbjct: 65  TNEKEVENAVKFTVEKYGKLDVLFSNAGVMEQP-GSFLDLNLEQFDRTMAVNVRGAAAFI 123

Query: 131 KHAARVMVPQ-QKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVN 189
           KHAAR MV +  +G I+ T S  +EI G G  AYT SK+ +LGLVK     LG+YGIRVN
Sbjct: 124 KHAARAMVEKGTRGSIVCTTSVASEIGGPGPHAYTASKHALLGLVKSACGGLGKYGIRVN 183

Query: 190 CVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQ 249
            V+PY +AT ++ +      ++E   +  G LKG  LK   +A AAL+LASD+S+YVSGQ
Sbjct: 184 GVAPYAVATAINSRDEETVRMVEEYSAATGILKGVVLKARHVAEAALFLASDDSAYVSGQ 243

Query: 250 NLVVDGGFSVVNP 262
           NL VDGG+SVV P
Sbjct: 244 NLAVDGGYSVVKP 256

Confers resistance to the incompatible pathogenic bacteria P.syringae pv. tomato DC3000 in a PR1-dependent manner. Seems not involved in abscisic acid (ABA) biosynthesis.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|F4J2Z7|SDR4_ARATH Short-chain dehydrogenase reductase 4 OS=Arabidopsis thaliana GN=SDR4 PE=2 SV=1

 Score =  233 bits (594), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 130/252 (51%), Positives = 173/252 (68%), Gaps = 4/252 (1%)

Query: 13  LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQD-VCYIHCDIS 71
           L+GK+AIITGGASGIGA AV LF ++GAKVVI D+Q++LG++LA  +G D   +  C+++
Sbjct: 44  LDGKIAIITGGASGIGAEAVRLFTDHGAKVVIVDIQEELGQNLAVSIGLDKASFYRCNVT 103

Query: 72  NEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAK 131
           +E +V N V   V K GKLD++++NAG+L+ +FGS+LD      +R + VN  G     K
Sbjct: 104 DETDVENAVKFTVEKHGKLDVLFSNAGVLE-AFGSVLDLDLEAFDRTMAVNVRGAAAFIK 162

Query: 132 HAARVMVPQ-QKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNC 190
           HAAR MV    +G I+ T S   EI G G  +YT SK+ +LGL++   A LGQYGIRVN 
Sbjct: 163 HAARSMVASGTRGSIVCTTSIAAEIGGPGPHSYTASKHALLGLIRSACAGLGQYGIRVNG 222

Query: 191 VSPYGLATGMSMKGGVDPA-LIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQ 249
           V+PYG+ATGM+     +   ++E     +GNLKG  LK   IA AAL+LASD+S Y+SGQ
Sbjct: 223 VAPYGVATGMTSAYNEEAVKMLEEYGEALGNLKGVVLKARHIAEAALFLASDDSVYISGQ 282

Query: 250 NLVVDGGFSVVN 261
           NLVVDGGFSVV 
Sbjct: 283 NLVVDGGFSVVK 294

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q9SCU0|SDR2A_ARATH Short-chain dehydrogenase reductase 2a OS=Arabidopsis thaliana GN=SDR2a PE=3 SV=1

 Score =  227 bits (579), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 132/272 (48%), Positives = 167/272 (61%), Gaps = 18/272 (6%)

Query: 11  KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQD-----VCY 65
           KRLEGKVAIITGGA GIG   V LF  +GA VVIADV +  G  LA  L        V +
Sbjct: 30  KRLEGKVAIITGGAHGIGKATVMLFARHGATVVIADVDNVAGSSLAKSLSSHKTSPMVAF 89

Query: 66  IHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGIL--DRSFGSILDTPKSDLERLINVNT 123
           I CD+S E +V NLV+  V+++G+LDI++NNAG+L   +   SILD    + + ++ VN 
Sbjct: 90  ISCDVSVEADVENLVNVTVARYGRLDILFNNAGVLGDQKKHKSILDFDADEFDHVMRVNV 149

Query: 124 IGGFLGAKHAARVMVPQQ-KGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELG 182
            G  LG KH AR M+ +  KGCI+ TAS    + G+G  AYT SK+ I+GL K  A ELG
Sbjct: 150 RGVGLGMKHGARAMIKRGFKGCIISTASVAGVMGGMGPHAYTASKHAIVGLTKNAACELG 209

Query: 183 QYGIRVNCVSPYGLATGM------SMKGGVDPALIESS----MSQMGNLKGEFLKTDGIA 232
           +YGIRVNC+SP+G+AT M         GG             +  + NLKGE L+ + IA
Sbjct: 210 KYGIRVNCISPFGVATSMLVNAWRKTSGGDVEDDDVEEMEEFVRSLANLKGETLRANDIA 269

Query: 233 NAALYLASDESSYVSGQNLVVDGGFSVVNPTV 264
            AALYLASDES YV+G NLVVDGG +     V
Sbjct: 270 EAALYLASDESKYVNGHNLVVDGGVTTARNCV 301

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|F4J300|SDR5_ARATH Short-chain dehydrogenase reductase 5 OS=Arabidopsis thaliana GN=SDR5 PE=2 SV=1

 Score =  221 bits (564), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 125/255 (49%), Positives = 168/255 (65%), Gaps = 3/255 (1%)

Query: 11  KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQD-VCYIHCD 69
           +RL+GK+ IITGGASGIGA A  LF ++GAKVVI D+Q++LG+++A  +G D   +  CD
Sbjct: 4   QRLDGKIVIITGGASGIGAEAARLFTDHGAKVVIVDLQEELGQNVAVSIGLDKASFYRCD 63

Query: 70  ISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLG 129
           I++E EV N V   V K GKLD++++NAG+++   GSILD      +R + VN  G    
Sbjct: 64  ITDETEVENAVKFTVEKHGKLDVLFSNAGVME-PHGSILDLDLEAFDRTMAVNVRGAAAF 122

Query: 130 AKHAARVMVPQ-QKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRV 188
            KHAAR MV    +G I+ T S   EI G G  +YT SK+ +LGLV+     LG+YGIRV
Sbjct: 123 IKHAARSMVASGTRGSIVCTTSVTAEIGGPGPHSYTASKHALLGLVRSACGGLGKYGIRV 182

Query: 189 NCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSG 248
           N V+PYG+ATG++        ++E   S    LKG  LK   +A+AAL+LASD+S Y+SG
Sbjct: 183 NGVAPYGVATGLTSYNEETVKMVEDYCSATAILKGVVLKARHVADAALFLASDDSVYISG 242

Query: 249 QNLVVDGGFSVVNPT 263
           QNL VDGG+SVV  T
Sbjct: 243 QNLGVDGGYSVVKLT 257

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|O80714|SDR3C_ARATH Short-chain dehydrogenase reductase 3c OS=Arabidopsis thaliana GN=SDR3c PE=3 SV=1

 Score =  221 bits (563), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 122/254 (48%), Positives = 167/254 (65%), Gaps = 4/254 (1%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQD-VCYIHCDI 70
           RLEGK+ IITGGASGIGA A  LF ++GAKVVI DVQ++LG+++A  +G+D   +  CD+
Sbjct: 5   RLEGKIVIITGGASGIGADAARLFTDHGAKVVIVDVQEELGQNVAVLIGKDKASFYRCDV 64

Query: 71  SNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGA 130
           +NE EV + V   V K GKLD++++NAG+L+    S LD      +R++ VN  G     
Sbjct: 65  TNETEVEDAVKFTVEKHGKLDVLFSNAGVLE-PLESFLDFDLERFDRIMAVNVRGAAAFI 123

Query: 131 KHAARVMVPQ-QKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVN 189
           KHAAR MV +  +G I+ T S   EI G G   YT SK+G++GL++    +LG+YGIRVN
Sbjct: 124 KHAARAMVEKGTRGSIVCTTSVSAEIGG-GHHGYTASKHGLVGLIRSACGDLGKYGIRVN 182

Query: 190 CVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQ 249
            V+PY +AT M+    V    +E      G LKG  LK   +A  AL+LASD+S+Y+SGQ
Sbjct: 183 GVAPYAVATPMTSHDEVTGKQLEDYFDAKGILKGMVLKASHVAQVALFLASDDSAYISGQ 242

Query: 250 NLVVDGGFSVVNPT 263
           NL VDGG++VV P+
Sbjct: 243 NLAVDGGYTVVKPS 256

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q9C826|ABA2_ARATH Xanthoxin dehydrogenase OS=Arabidopsis thaliana GN=ABA2 PE=1 SV=1

 Score =  214 bits (546), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 120/265 (45%), Positives = 165/265 (62%), Gaps = 12/265 (4%)

Query: 11  KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL-----GQDVCY 65
           +RL GKVA+ITGGA+GIG   V LFH++GAKV I D+QD LG ++   L      +   +
Sbjct: 16  QRLLGKVALITGGATGIGESIVRLFHKHGAKVCIVDLQDDLGGEVCKSLLRGESKETAFF 75

Query: 66  IHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIG 125
           IH D+  ED++ N VD AV  FG LDI+ NNAG+       I +   S+ E   +VN  G
Sbjct: 76  IHGDVRVEDDISNAVDFAVKNFGTLDILINNAGLCGAPCPDIRNYSLSEFEMTFDVNVKG 135

Query: 126 GFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYG 185
            FL  KHAARVM+P++KG I+   S    + G+G  +Y  SK+ +LGL + +AAELGQ+G
Sbjct: 136 AFLSMKHAARVMIPEKKGSIVSLCSVGGVVGGVGPHSYVGSKHAVLGLTRSVAAELGQHG 195

Query: 186 IRVNCVSPYGLATGMSMKGGVDPALIESSM-------SQMGNLKGEFLKTDGIANAALYL 238
           IRVNCVSPY +AT +++    +    E +        +   NLKG  L  D +ANA L+L
Sbjct: 196 IRVNCVSPYAVATKLALAHLPEEERTEDAFVGFRNFAAANANLKGVELTVDDVANAVLFL 255

Query: 239 ASDESSYVSGQNLVVDGGFSVVNPT 263
           ASD+S Y+SG NL++DGGF+  N +
Sbjct: 256 ASDDSRYISGDNLMIDGGFTCTNHS 280

Involved in the biosynthesis of abscisic acid.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 8

EC: 8

>sp|P50160|TS2_MAIZE Sex determination protein tasselseed-2 OS=Zea mays GN=TS2 PE=2 SV=1

 Score =  204 bits (519), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 123/278 (44%), Positives = 166/278 (59%), Gaps = 30/278 (10%)

Query: 11  KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDI 70
           KRL+GKVAI+TGGA GIG   V LF ++GA+VVIAD+ D  GE LA  LG  V ++ CD+
Sbjct: 51  KRLDGKVAIVTGGARGIGEAIVRLFAKHGARVVIADIDDAAGEALASALGPQVSFVRCDV 110

Query: 71  SNEDEVINLVDTAVSKFG-KLDIMYNNAGIL---DRSFGSILDTPKSDLERLINVNTIGG 126
           S ED+V   VD A+S+ G +LD+  NNAG+L    R+  SIL    ++ +R++ VN +G 
Sbjct: 111 SVEDDVRRAVDWALSRHGGRLDVYCNNAGVLGRQTRAARSILSFDAAEFDRVLRVNALGA 170

Query: 127 FLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGI 186
            LG KHAAR M P++ G I+  AS    + GLG  AYT SK+ I+GL K  A EL  +G+
Sbjct: 171 ALGMKHAARAMAPRRAGSIVSVASVAAVLGGLGPHAYTASKHAIVGLTKNAACELRAHGV 230

Query: 187 RVNCVSPYGLATGM--------------------------SMKGGVDPALIESSMSQMGN 220
           RVNCVSP+G+AT M                          ++    +   +E  +  +  
Sbjct: 231 RVNCVSPFGVATPMLINAWRQGHDDATADADRDLDLDLDVTVPSDQEVEKMEEVVRGLAT 290

Query: 221 LKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFS 258
           LKG  L+   IA A L+LASDE+ Y+SG NLVVDGG +
Sbjct: 291 LKGPTLRPRDIAEAVLFLASDEARYISGHNLVVDGGVT 328

Required for stage-specific floral organ abortion.

Zea mays (taxid: 4577)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	272
225440773	275	PREDICTED: momilactone A synthase-like [	0.977	0.967	0.716	1e-109
224088424	274	predicted protein [Populus trichocarpa]	0.981	0.974	0.727	1e-106
297740170	245	unnamed protein product [Vitis vinifera]	0.878	0.975	0.679	3e-97
6683479	273	wts2L [Citrullus lanatus]	0.970	0.967	0.628	1e-93
255579335	288	short chain alcohol dehydrogenase, putat	0.948	0.895	0.656	1e-91
380039550	272	tropinone reductase-like 1 [Erythroxylum	0.966	0.966	0.645	2e-91
380039552	275	tropinone reductase-like 2 [Erythroxylum	0.959	0.949	0.642	4e-91
449437438	273	PREDICTED: zerumbone synthase-like [Cucu	0.952	0.948	0.606	4e-89
284192458	276	secoisolariciresinol dehydrogenase [Sino	0.941	0.927	0.614	2e-80
255578631	242	short chain alcohol dehydrogenase, putat	0.849	0.954	0.577	4e-79

>gi|225440773|ref|XP_002275768.1| PREDICTED: momilactone A synthase-like [Vitis vinifera]

 Score =  400 bits (1027), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 192/268 (71%), Positives = 227/268 (84%), Gaps = 2/268 (0%)

Query: 5   SSAAPFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVC 64
           S A+P KRLEGKVAI+TGGASGIGA  V LF ENGAKV+IAD+QD LG+D+ +KLGQDV 
Sbjct: 7   SFASPSKRLEGKVAIVTGGASGIGASTVRLFWENGAKVIIADIQDDLGQDITNKLGQDVS 66

Query: 65  YIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTI 124
           YIHCD+SNED+V NLVDT +SK G+LDIMYNNAGILDR  GSILDT KSDL+RLI VN +
Sbjct: 67  YIHCDVSNEDDVQNLVDTTISKHGRLDIMYNNAGILDRHLGSILDTQKSDLDRLIGVNLV 126

Query: 125 GGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQY 184
           G FLGAKHAARVM+PQ+KGCILFTAS CT IAG+ + +Y ++KYGI GL + LAAELGQY
Sbjct: 127 GSFLGAKHAARVMIPQKKGCILFTASCCTSIAGISTHSYAVTKYGIWGLARNLAAELGQY 186

Query: 185 GIRVNCVSPYGLATGMSMKGGVDPAL--IESSMSQMGNLKGEFLKTDGIANAALYLASDE 242
           GIRVNCVSPYGL TGM  +G     +   E+S+S+MGNLKGE LK++G+A AALYLASDE
Sbjct: 187 GIRVNCVSPYGLITGMGQQGLTSEEVEAAEASLSEMGNLKGEVLKSEGVARAALYLASDE 246

Query: 243 SSYVSGQNLVVDGGFSVVNPTVMRAYGL 270
           +SYVSG NLVVDGGFSVVNPT+++A+ +
Sbjct: 247 ASYVSGLNLVVDGGFSVVNPTMIKAFNM 274

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224088424|ref|XP_002308449.1| predicted protein [Populus trichocarpa] gi|222854425|gb|EEE91972.1| predicted protein [Populus trichocarpa]

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 195/268 (72%), Positives = 223/268 (83%), Gaps = 1/268 (0%)

Query: 1   MNGPSSAAPFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLG 60
           M G SS A  KRL GKV+IITGGASGIGA AV+LFHENGAKVV+AD+QD LG+ LA KLG
Sbjct: 1   MTGTSSVASQKRLAGKVSIITGGASGIGASAVQLFHENGAKVVLADIQDTLGQALAQKLG 60

Query: 61  QDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLIN 120
           +DVCYIHCD+SNEDEV NLVD  V K+GKLDIMYNNAGIL R  GSILD PKSDL+RLI+
Sbjct: 61  EDVCYIHCDVSNEDEVSNLVDATVKKYGKLDIMYNNAGILGRPLGSILDAPKSDLDRLIS 120

Query: 121 VNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAE 180
           VN +G FLGAKHAAR+MV Q +GCILFTASACT I GL +PAY ++K+GI+GL K LAAE
Sbjct: 121 VNLVGCFLGAKHAARIMVTQGQGCILFTASACTAIGGLATPAYAVTKHGIVGLAKNLAAE 180

Query: 181 LGQYGIRVNCVSPYGLATGMSMKGGVDPA-LIESSMSQMGNLKGEFLKTDGIANAALYLA 239
           LGQYGIRVNCVSPYG+AT M      D A +IE S+ QMGNLKG+  K + +A AALYLA
Sbjct: 181 LGQYGIRVNCVSPYGVATPMYEGFSADTAPMIEESLGQMGNLKGKIPKVEDMAKAALYLA 240

Query: 240 SDESSYVSGQNLVVDGGFSVVNPTVMRA 267
           SDE++YVSG NLVVDGGFSVVNPT+M+A
Sbjct: 241 SDEANYVSGMNLVVDGGFSVVNPTMMKA 268

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297740170|emb|CBI30352.3| unnamed protein product [Vitis vinifera]

 Score =  360 bits (925), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 176/259 (67%), Positives = 205/259 (79%), Gaps = 20/259 (7%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDIS 71
           RLEGKVAI+TGGASGIGA  V LF ENGAKV+IAD+QD LG+D+ +KLGQDV YIHCD+S
Sbjct: 6   RLEGKVAIVTGGASGIGASTVRLFWENGAKVIIADIQDDLGQDITNKLGQDVSYIHCDVS 65

Query: 72  NEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAK 131
           NED+V NLVDT +SK G+LDIMYNNAGILDR  GSILDT KSDL+RLI VN +G FLGAK
Sbjct: 66  NEDDVQNLVDTTISKHGRLDIMYNNAGILDRHLGSILDTQKSDLDRLIGVNLVGSFLGAK 125

Query: 132 HAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCV 191
           HAARVM+PQ+KGCILFTAS CT IAG+ + +Y ++KYGI GL + LAAELGQYGIRVNCV
Sbjct: 126 HAARVMIPQKKGCILFTASCCTSIAGISTHSYAVTKYGIWGLARNLAAELGQYGIRVNCV 185

Query: 192 SPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNL 251
           SPYGL TGM  +G                        +G+A AALYLASDE+SYVSG NL
Sbjct: 186 SPYGLITGMGQQG--------------------LTSEEGVARAALYLASDEASYVSGLNL 225

Query: 252 VVDGGFSVVNPTVMRAYGL 270
           VVDGGFSVVNPT+++A+ +
Sbjct: 226 VVDGGFSVVNPTMIKAFNM 244

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|6683479|dbj|BAA89230.1| wts2L [Citrullus lanatus]

 Score =  348 bits (894), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 169/269 (62%), Positives = 213/269 (79%), Gaps = 5/269 (1%)

Query: 6   SAAPFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCY 65
           S  P +RL+GKVAIITGGASGIG  AV +FHENGAKV+IAD+QD++G+ +AD+LG DV Y
Sbjct: 6   SPTPLRRLDGKVAIITGGASGIGTSAVRIFHENGAKVIIADIQDEIGQKIADELGDDVSY 65

Query: 66  IHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIG 125
           IHCD+S ED+V NLVD AV + GKLDIMY+NAG+LDRSF  ILD  KSDL++++ VN +G
Sbjct: 66  IHCDVSKEDDVSNLVDAAVHRHGKLDIMYSNAGVLDRSFSGILDVTKSDLDKVLGVNVMG 125

Query: 126 GFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYG 185
            F GAKHAARVM+P++ GCILFT+SA T IAGL S  Y  SK  +LGLV+ LAAELGQ+G
Sbjct: 126 AFWGAKHAARVMIPEKNGCILFTSSATTNIAGLSSHPYAASKCAVLGLVRNLAAELGQHG 185

Query: 186 IRVNCVSPYGLATGMSMKGGVDP---ALIESSMSQMGNLKGEFLKTDGIANAALYLASDE 242
           IRVNCV+P+ +ATG++  G  DP     +E+ ++   NLKG  LK D IA AALYLASD+
Sbjct: 186 IRVNCVAPFVVATGIA--GSRDPMQAEALETMVTTWANLKGRVLKADDIAKAALYLASDD 243

Query: 243 SSYVSGQNLVVDGGFSVVNPTVMRAYGLI 271
           ++YVSG NLVVDGG+SVVNPT+++   L+
Sbjct: 244 ANYVSGLNLVVDGGYSVVNPTMLKTLKLM 272

Source: Citrullus lanatus

Species: Citrullus lanatus

Genus: Citrullus

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255579335|ref|XP_002530512.1| short chain alcohol dehydrogenase, putative [Ricinus communis] gi|223529916|gb|EEF31844.1| short chain alcohol dehydrogenase, putative [Ricinus communis]

 Score =  342 bits (876), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 172/262 (65%), Positives = 216/262 (82%), Gaps = 4/262 (1%)

Query: 10  FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCD 69
           + RL GKVAIITGGASGIGA  V+LFH NGAKVVIAD+QD+LG+ +A+ LG+DV Y+HCD
Sbjct: 20  YFRLAGKVAIITGGASGIGASTVKLFHGNGAKVVIADIQDELGQAIAENLGEDVFYMHCD 79

Query: 70  ISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLG 129
           + NEDE+ N+VDT VSK+GKLDIMYNNAG++DR  GSILD+ KS+L+RL++VN +G FLG
Sbjct: 80  VRNEDEISNVVDTTVSKYGKLDIMYNNAGVIDRYLGSILDSTKSELDRLLSVNVVGAFLG 139

Query: 130 AKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVN 189
           AKHAARVMV Q KGCILFT+SACT I G+ +  Y ++KYGI+GL K LAAELGQ+GIRVN
Sbjct: 140 AKHAARVMVKQGKGCILFTSSACTAIGGISTHPYAVTKYGIVGLSKNLAAELGQHGIRVN 199

Query: 190 CVSPYGLAT---GMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYV 246
           CVSP G+ T   G+++      A  E+++S +GNLKG+ L+ + +A AALYLASDE++YV
Sbjct: 200 CVSPSGVVTPIAGVTLSEAEI-ASAEAAISAVGNLKGQVLRPEDVAKAALYLASDEANYV 258

Query: 247 SGQNLVVDGGFSVVNPTVMRAY 268
           SG NLVVDGG+SVVNPTVMR +
Sbjct: 259 SGLNLVVDGGYSVVNPTVMRNF 280

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|380039550|gb|AFD32319.1| tropinone reductase-like 1 [Erythroxylum coca]

 Score =  341 bits (874), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 171/265 (64%), Positives = 207/265 (78%), Gaps = 2/265 (0%)

Query: 5   SSAAPFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVC 64
           S A P KRLEGKVAIITGGASGIGA   ELFHENGAKVVIAD+QD LG+ LA KLG   C
Sbjct: 3   SIAGPHKRLEGKVAIITGGASGIGACTAELFHENGAKVVIADIQDDLGQALATKLGGKAC 62

Query: 65  YIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSF--GSILDTPKSDLERLINVN 122
           YIHCD+S ED+VINLVDT V+K+G+LDIM+NNAGI++      S++++ KSDL+RL++VN
Sbjct: 63  YIHCDVSKEDDVINLVDTTVAKYGRLDIMFNNAGIIEGQGLPVSVVESEKSDLDRLLSVN 122

Query: 123 TIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELG 182
             G FLGAKHA RVMV Q+KGCILFT+S CT IAGL   AY  SK G+ GL K L  ELG
Sbjct: 123 LGGAFLGAKHATRVMVQQRKGCILFTSSLCTSIAGLSGHAYAASKSGVCGLAKNLTPELG 182

Query: 183 QYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDE 242
           +YGIRVNC+SPYGL TG+S     +  L+E+ +S++G L G+ L+ DGIA AAL+LASDE
Sbjct: 183 KYGIRVNCISPYGLVTGISNISEANRELVEAMLSELGTLSGQTLRADGIAKAALFLASDE 242

Query: 243 SSYVSGQNLVVDGGFSVVNPTVMRA 267
           + YVSG N+VVDGG+SVVNP +  A
Sbjct: 243 AYYVSGINMVVDGGYSVVNPRLADA 267

Source: Erythroxylum coca

Species: Erythroxylum coca

Genus: Erythroxylum

Family: Erythroxylaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|380039552|gb|AFD32320.1| tropinone reductase-like 2 [Erythroxylum coca]

 Score =  340 bits (871), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 171/266 (64%), Positives = 208/266 (78%), Gaps = 5/266 (1%)

Query: 5   SSAAPFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVC 64
           S A P KRLEGKVAIITGGASGIGA   ELFHENGAKVVIAD+QD LG+ LA KLG   C
Sbjct: 3   SVAGPHKRLEGKVAIITGGASGIGACTAELFHENGAKVVIADIQDDLGQALATKLGGKAC 62

Query: 65  YIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSF--GSILDTPKSDLERLINVN 122
           YIHCD+S EDEVINLVDT V+K+G+LDIM+NNAGI++      S++++ KSDL+RL++VN
Sbjct: 63  YIHCDVSKEDEVINLVDTTVAKYGRLDIMFNNAGIIEGQGLPVSVVESEKSDLDRLLSVN 122

Query: 123 TIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELG 182
             G FLGAKHA RVMV Q+KGCILFT+S CT IAGL   AY  SK G+ GL K L  ELG
Sbjct: 123 LGGAFLGAKHATRVMVQQRKGCILFTSSVCTSIAGLSGHAYAASKSGVCGLAKNLTPELG 182

Query: 183 QYGIRVNCVSPYGLATGMSM---KGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLA 239
           +YGIRVNC+SPYGL TG+S    +G  +   +E+ +S++G L G+ L+ DGIA AAL+LA
Sbjct: 183 KYGIRVNCISPYGLVTGVSNVSGEGEANREFVEAMLSELGTLSGQTLRADGIAKAALFLA 242

Query: 240 SDESSYVSGQNLVVDGGFSVVNPTVM 265
           SDE+ YVSG N+VVDGG+SVVNP ++
Sbjct: 243 SDEAYYVSGINMVVDGGYSVVNPRLV 268

Source: Erythroxylum coca

Species: Erythroxylum coca

Genus: Erythroxylum

Family: Erythroxylaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449437438|ref|XP_004136499.1| PREDICTED: zerumbone synthase-like [Cucumis sativus] gi|449515867|ref|XP_004164969.1| PREDICTED: zerumbone synthase-like [Cucumis sativus]

 Score =  333 bits (854), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 160/264 (60%), Positives = 209/264 (79%), Gaps = 5/264 (1%)

Query: 6   SAAPFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCY 65
           S  P +RLEGKVAIITGGASGIGA AV +FHENGAK++IAD+QD++G+ +AD+LG+DV Y
Sbjct: 6   SPTPLRRLEGKVAIITGGASGIGASAVRIFHENGAKIIIADIQDEVGQKIADELGEDVSY 65

Query: 66  IHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIG 125
           +HCD+S E++V N+VD AV + GKLDIMY+NAG++DRSF  ILD  KSDL+++++VN +G
Sbjct: 66  LHCDVSKEEDVSNVVDAAVYRHGKLDIMYSNAGVIDRSFSGILDVTKSDLDKVLSVNVMG 125

Query: 126 GFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYG 185
            F GAKHAARVM+PQ+ GCILFT+S+ T IAGL S  Y  SK  +LGLV+ L  ELGQ+G
Sbjct: 126 AFWGAKHAARVMIPQKNGCILFTSSSTTNIAGLSSHPYASSKCAVLGLVRNLCVELGQHG 185

Query: 186 IRVNCVSPYGLATGMSMKGGVDPALI---ESSMSQMGNLKGEFLKTDGIANAALYLASDE 242
           IRVNCV+P+ +AT ++  G  +P  +   E+ ++   NLKG  LK D IA AALYL SDE
Sbjct: 186 IRVNCVAPFVVATAIA--GPRNPMQVEALETMVTSWANLKGCVLKADDIAKAALYLVSDE 243

Query: 243 SSYVSGQNLVVDGGFSVVNPTVMR 266
           + YVSG NLVVDGG+SVVNP++++
Sbjct: 244 AKYVSGLNLVVDGGYSVVNPSMLK 267

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|284192458|gb|ADB82907.1| secoisolariciresinol dehydrogenase [Sinopodophyllum hexandrum]

 Score =  304 bits (779), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 161/262 (61%), Positives = 192/262 (73%), Gaps = 6/262 (2%)

Query: 5   SSAAPF-KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDV 63
           S+AAP  +RLEGKVAIITGGASGIG   V LF  +GAKVVIADVQD LG+ L ++L  + 
Sbjct: 4   STAAPNPRRLEGKVAIITGGASGIGEAVVRLFWIHGAKVVIADVQDDLGQTLCNELDNNS 63

Query: 64  CYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNT 123
            Y+HCD++NED++  +VD AV KFGKLDIM NN GILD    SIL   K D+ER++NVN 
Sbjct: 64  IYVHCDVTNEDDLSKVVDLAVEKFGKLDIMSNNPGILDTKTTSILSINKEDIERVLNVNL 123

Query: 124 IGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQ 183
           IGGF+GAKHAARVMVP +KGCILFT SA   IA      Y  SK G++GLV  +AAELGQ
Sbjct: 124 IGGFMGAKHAARVMVPARKGCILFTGSATASIACPMRHGYVASKQGLVGLVHNIAAELGQ 183

Query: 184 YGIRVNCVSPYGLATGMSMKGGV---DPALIESSMSQMGNLKGEFLKTDGIANAALYLAS 240
           YGIRVNC+SPY +AT M MK  +    P  + S +S  GNLKG  L+ D  A AALYLAS
Sbjct: 184 YGIRVNCISPYAVATTM-MKNVIPHESPEQLSSFLSGTGNLKGAVLRVDN-ARAALYLAS 241

Query: 241 DESSYVSGQNLVVDGGFSVVNP 262
           DE+ YVSGQNL +DGG+S+ NP
Sbjct: 242 DEAQYVSGQNLALDGGYSITNP 263

Source: Sinopodophyllum hexandrum

Species: Sinopodophyllum hexandrum

Genus: Sinopodophyllum

Family: Berberidaceae

Order: Ranunculales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255578631|ref|XP_002530177.1| short chain alcohol dehydrogenase, putative [Ricinus communis] gi|223530338|gb|EEF32232.1| short chain alcohol dehydrogenase, putative [Ricinus communis]

 Score =  300 bits (768), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 156/270 (57%), Positives = 192/270 (71%), Gaps = 39/270 (14%)

Query: 1   MNGPSSAAPFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLG 60
           M   S     KRLEGKVAIITGGASGIGA  V LFHENGAK+V+AD++D LG+++A++LG
Sbjct: 1   MGEASGVVSHKRLEGKVAIITGGASGIGAATVHLFHENGAKIVLADIKDSLGQEIANRLG 60

Query: 61  QDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLIN 120
           ++V YIHCD+SNED++INLVDT ++K GKLDIMYNNAG++DRS GSILDT KS+L+ ++ 
Sbjct: 61  ENVTYIHCDVSNEDDMINLVDTTMAKHGKLDIMYNNAGVMDRSLGSILDTKKSELDLMLK 120

Query: 121 VNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAE 180
           VN  G FLGAKHAARVM+PQ+K  +               P                   
Sbjct: 121 VNLGGAFLGAKHAARVMIPQRKVLV--------------HPX------------------ 148

Query: 181 LGQYGIRVNCVSPYGLATGMSMKGGVDPALI---ESSMSQMGNLKGEFLKTDGIANAALY 237
              YGIRVNCVSPYGL +GM+     DPAL+   E  +S+ GNL+G+ L+ DGIA AALY
Sbjct: 149 --XYGIRVNCVSPYGLISGMTPV--TDPALLQMAEGILSKAGNLRGQTLRADGIAKAALY 204

Query: 238 LASDESSYVSGQNLVVDGGFSVVNPTVMRA 267
           LASDE+ YVSG NLVVDGGFSVVNPT+M+A
Sbjct: 205 LASDEAYYVSGLNLVVDGGFSVVNPTIMKA 234

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	272
TAIR|locus:2041394	257	SDR5 "short-chain dehydrogenas	0.922	0.976	0.486	2.2e-57
TAIR|locus:2094807	298	SDR4 "short-chain dehydrogenas	0.908	0.828	0.466	2.1e-52
TAIR|locus:2041439	257	SDR3 "short-chain dehydrogenas	0.919	0.972	0.450	5.6e-52
TAIR|locus:2098287	303	SDR2 "short-chain dehydrogenas	0.933	0.838	0.455	3.1e-51
TAIR|locus:2018149	285	ABA2 "ABA DEFICIENT 2" [Arabid	0.941	0.898	0.425	1.5e-49
TAIR|locus:2094822	259	AT3G29260 [Arabidopsis thalian	0.926	0.972	0.443	3.2e-49
TAIR|locus:2041449	258	AT2G47120 [Arabidopsis thalian	0.919	0.968	0.433	4.1e-49
TAIR|locus:2125452	343	AT4G03140 [Arabidopsis thalian	0.941	0.746	0.408	1.8e-48
TAIR|locus:2088399	306	AT3G26770 [Arabidopsis thalian	0.911	0.810	0.392	1.2e-44
TAIR|locus:2088419	300	AT3G26760 [Arabidopsis thalian	0.911	0.826	0.385	1.3e-43

TAIR|locus:2041394 SDR5 "short-chain dehydrogenase reductase 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 590 (212.7 bits), Expect = 2.2e-57, P = 2.2e-57
 Identities = 124/255 (48%), Positives = 169/255 (66%)

Query:    11 KRLEGKVXXXXXXXXXXXXXXVELFHENGAKVVIADVQDKLGEDLADKLGQD-VCYIHCD 69
             KRL+GK+              V LF E+GA+VVI DVQD+LG+++A  +G+D   Y HCD
Sbjct:     4 KRLDGKIVIITGGASGIGAESVRLFTEHGARVVIVDVQDELGQNVAVSIGEDKASYYHCD 63

Query:    70 ISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLG 129
             ++NE EV N V   V K+GKLD++++NAG+++  F SILD   ++L+R I +N  G    
Sbjct:    64 VTNETEVENAVKFTVEKYGKLDVLFSNAGVIE-PFVSILDLNLNELDRTIAINLRGTAAF 122

Query:   130 AKHAARVMVPQQ-KGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRV 188
              KHAAR MV +  +G I+ T S   EIAG     YT SK+G+LGL+K  +  LG+YGIRV
Sbjct:   123 IKHAARAMVEKGIRGSIVCTTSVAAEIAGTAPHGYTTSKHGLLGLIKSASGGLGKYGIRV 182

Query:   189 NCVSPYGLATGMSMKG-GVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVS 247
             N V+P+G+AT +   G  ++P ++E + S   NLKG  LK   +A AAL+LASDES+YVS
Sbjct:   183 NGVAPFGVATPLVCNGFKMEPNVVEQNTSASANLKGIVLKARHVAEAALFLASDESAYVS 242

Query:   248 GQNLVVDGGFSVVNP 262
             GQNL VDGG+SVV P
Sbjct:   243 GQNLAVDGGYSVVKP 257

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2094807 SDR4 "short-chain dehydrogenase reductase 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 543 (196.2 bits), Expect = 2.1e-52, P = 2.1e-52
 Identities = 117/251 (46%), Positives = 160/251 (63%)

Query:    13 LEGKVXXXXXXXXXXXXXXVELFHENGAKVVIADVQDKLGEDLADKLGQD-VCYIHCDIS 71
             L+GK+              V LF ++GAKVVI D+Q++LG++LA  +G D   +  C+++
Sbjct:    44 LDGKIAIITGGASGIGAEAVRLFTDHGAKVVIVDIQEELGQNLAVSIGLDKASFYRCNVT 103

Query:    72 NEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAK 131
             +E +V N V   V K GKLD++++NAG+L+ +FGS+LD      +R + VN  G     K
Sbjct:   104 DETDVENAVKFTVEKHGKLDVLFSNAGVLE-AFGSVLDLDLEAFDRTMAVNVRGAAAFIK 162

Query:   132 HAARVMVPQ-QKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNC 190
             HAAR MV    +G I+ T S   EI G G  +YT SK+ +LGL++   A LGQYGIRVN 
Sbjct:   163 HAARSMVASGTRGSIVCTTSIAAEIGGPGPHSYTASKHALLGLIRSACAGLGQYGIRVNG 222

Query:   191 VSPYGLATGMSMKGGVDPA-LIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQ 249
             V+PYG+ATGM+     +   ++E     +GNLKG  LK   IA AAL+LASD+S Y+SGQ
Sbjct:   223 VAPYGVATGMTSAYNEEAVKMLEEYGEALGNLKGVVLKARHIAEAALFLASDDSVYISGQ 282

Query:   250 NLVVDGGFSVV 260
             NLVVDGGFSVV
Sbjct:   283 NLVVDGGFSVV 293

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0005507 "copper ion binding" evidence=IDA

TAIR|locus:2041439 SDR3 "short-chain dehydrogenase/reductase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 539 (194.8 bits), Expect = 5.6e-52, P = 5.6e-52
 Identities = 114/253 (45%), Positives = 159/253 (62%)

Query:    12 RLEGKVXXXXXXXXXXXXXXVELFHENGAKVVIADVQDKLGEDLADKLGQD-VCYIHCDI 70
             RL+GK+              V LF ++GAKVVI D Q++LG+++A  +G+D   +  CD+
Sbjct:     5 RLDGKIAIITGGASGIGAEAVRLFTDHGAKVVIVDFQEELGQNVAVSVGKDKASFYRCDV 64

Query:    71 SNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGA 130
             +NE EV N V   V K+GKLD++++NAG++++  GS LD      +R + VN  G     
Sbjct:    65 TNEKEVENAVKFTVEKYGKLDVLFSNAGVMEQP-GSFLDLNLEQFDRTMAVNVRGAAAFI 123

Query:   131 KHAARVMVPQ-QKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVN 189
             KHAAR MV +  +G I+ T S  +EI G G  AYT SK+ +LGLVK     LG+YGIRVN
Sbjct:   124 KHAARAMVEKGTRGSIVCTTSVASEIGGPGPHAYTASKHALLGLVKSACGGLGKYGIRVN 183

Query:   190 CVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQ 249
              V+PY +AT ++ +      ++E   +  G LKG  LK   +A AAL+LASD+S+YVSGQ
Sbjct:   184 GVAPYAVATAINSRDEETVRMVEEYSAATGILKGVVLKARHVAEAALFLASDDSAYVSGQ 243

Query:   250 NLVVDGGFSVVNP 262
             NL VDGG+SVV P
Sbjct:   244 NLAVDGGYSVVKP 256

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0009688 "abscisic acid biosynthetic process" evidence=IMP

GO:0042742 "defense response to bacterium" evidence=IMP

TAIR|locus:2098287 SDR2 "short-chain dehydrogenase/reductase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 532 (192.3 bits), Expect = 3.1e-51, P = 3.1e-51
 Identities = 124/272 (45%), Positives = 161/272 (59%)

Query:    11 KRLEGKVXXXXXXXXXXXXXXVELFHENGAKVVIADVQDKLGEDLADKLGQD-----VCY 65
             KRLEGKV              V LF  +GA VVIADV +  G  LA  L        V +
Sbjct:    30 KRLEGKVAIITGGAHGIGKATVMLFARHGATVVIADVDNVAGSSLAKSLSSHKTSPMVAF 89

Query:    66 IHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGIL--DRSFGSILDTPKSDLERLINVNT 123
             I CD+S E +V NLV+  V+++G+LDI++NNAG+L   +   SILD    + + ++ VN 
Sbjct:    90 ISCDVSVEADVENLVNVTVARYGRLDILFNNAGVLGDQKKHKSILDFDADEFDHVMRVNV 149

Query:   124 IGGFLGAKHAARVMVPQQ-KGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELG 182
              G  LG KH AR M+ +  KGCI+ TAS    + G+G  AYT SK+ I+GL K  A ELG
Sbjct:   150 RGVGLGMKHGARAMIKRGFKGCIISTASVAGVMGGMGPHAYTASKHAIVGLTKNAACELG 209

Query:   183 QYGIRVNCVSPYGLATGMSMK-------GGV---DPALIESSMSQMGNLKGEFLKTDGIA 232
             +YGIRVNC+SP+G+AT M +        G V   D   +E  +  + NLKGE L+ + IA
Sbjct:   210 KYGIRVNCISPFGVATSMLVNAWRKTSGGDVEDDDVEEMEEFVRSLANLKGETLRANDIA 269

Query:   233 NAALYLASDESSYVSGQNLVVDGGFSVVNPTV 264
              AALYLASDES YV+G NLVVDGG +     V
Sbjct:   270 EAALYLASDESKYVNGHNLVVDGGVTTARNCV 301

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2018149 ABA2 "ABA DEFICIENT 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
 Identities = 114/268 (42%), Positives = 159/268 (59%)

Query:     6 SAAPFKRLEGKVXXXXXXXXXXXXXXVELFHENGAKVVIADVQDKLGEDLADKL--GQD- 62
             S+ P +RL GKV              V LFH++GAKV I D+QD LG ++   L  G+  
Sbjct:    11 SSLPSQRLLGKVALITGGATGIGESIVRLFHKHGAKVCIVDLQDDLGGEVCKSLLRGESK 70

Query:    63 --VCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLIN 120
                 +IH D+  ED++ N VD AV  FG LDI+ NNAG+       I +   S+ E   +
Sbjct:    71 ETAFFIHGDVRVEDDISNAVDFAVKNFGTLDILINNAGLCGAPCPDIRNYSLSEFEMTFD 130

Query:   121 VNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAE 180
             VN  G FL  KHAARVM+P++KG I+   S    + G+G  +Y  SK+ +LGL + +AAE
Sbjct:   131 VNVKGAFLSMKHAARVMIPEKKGSIVSLCSVGGVVGGVGPHSYVGSKHAVLGLTRSVAAE 190

Query:   181 LGQYGIRVNCVSPYGLATGMSM-----KGGVDPALI--ESSMSQMGNLKGEFLKTDGIAN 233
             LGQ+GIRVNCVSPY +AT +++     +   + A +   +  +   NLKG  L  D +AN
Sbjct:   191 LGQHGIRVNCVSPYAVATKLALAHLPEEERTEDAFVGFRNFAAANANLKGVELTVDDVAN 250

Query:   234 AALYLASDESSYVSGQNLVVDGGFSVVN 261
             A L+LASD+S Y+SG NL++DGGF+  N
Sbjct:   251 AVLFLASDDSRYISGDNLMIDGGFTCTN 278

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0010301 "xanthoxin dehydrogenase activity" evidence=IDA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0010182 "sugar mediated signaling pathway" evidence=TAS

GO:0009408 "response to heat" evidence=IMP

GO:0009414 "response to water deprivation" evidence=IMP

GO:0010115 "regulation of abscisic acid biosynthetic process" evidence=IMP

GO:0009750 "response to fructose stimulus" evidence=IMP

GO:0009688 "abscisic acid biosynthetic process" evidence=IMP

GO:0006561 "proline biosynthetic process" evidence=IMP

TAIR|locus:2094822 AT3G29260 [Arabidopsis thaliana (taxid:3702)]

 Score = 513 (185.6 bits), Expect = 3.2e-49, P = 3.2e-49
 Identities = 113/255 (44%), Positives = 156/255 (61%)

Query:    11 KRLEGKVXXXXXXXXXXXXXXVELFHENGAKVVIADVQDKLGEDLADKLGQD-VCYIHCD 69
             +RL+GK+                LF ++GAKVVI D+Q++LG+++A  +G D   +  CD
Sbjct:     4 QRLDGKIVIITGGASGIGAEAARLFTDHGAKVVIVDLQEELGQNVAVSIGLDKASFYRCD 63

Query:    70 ISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLG 129
             I++E EV N V   V K GKLD++++NAG+++   GSILD      +R + VN  G    
Sbjct:    64 ITDETEVENAVKFTVEKHGKLDVLFSNAGVME-PHGSILDLDLEAFDRTMAVNVRGAAAF 122

Query:   130 AKHAARVMVPQ-QKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRV 188
              KHAAR MV    +G I+ T S   EI G G  +YT SK+ +LGLV+     LG+YGIRV
Sbjct:   123 IKHAARSMVASGTRGSIVCTTSVTAEIGGPGPHSYTASKHALLGLVRSACGGLGKYGIRV 182

Query:   189 NCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSG 248
             N V+PYG+ATG++        ++E   S    LKG  LK   +A+AAL+LASD+S Y+SG
Sbjct:   183 NGVAPYGVATGLTSYNEETVKMVEDYCSATAILKGVVLKARHVADAALFLASDDSVYISG 242

Query:   249 QNLVVDGGFSVVNPT 263
             QNL VDGG+SVV  T
Sbjct:   243 QNLGVDGGYSVVKLT 257

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2041449 AT2G47120 [Arabidopsis thaliana (taxid:3702)]

 Score = 512 (185.3 bits), Expect = 4.1e-49, P = 4.1e-49
 Identities = 110/254 (43%), Positives = 155/254 (61%)

Query:    12 RLEGKVXXXXXXXXXXXXXXVELFHENGAKVVIADVQDKLGEDLADKLGQD-VCYIHCDI 70
             RLEGK+                LF ++GAKVVI DVQ++LG+++A  +G+D   +  CD+
Sbjct:     5 RLEGKIVIITGGASGIGADAARLFTDHGAKVVIVDVQEELGQNVAVLIGKDKASFYRCDV 64

Query:    71 SNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGA 130
             +NE EV + V   V K GKLD++++NAG+L+    S LD      +R++ VN  G     
Sbjct:    65 TNETEVEDAVKFTVEKHGKLDVLFSNAGVLE-PLESFLDFDLERFDRIMAVNVRGAAAFI 123

Query:   131 KHAARVMVPQ-QKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVN 189
             KHAAR MV +  +G I+ T S   EI G G   YT SK+G++GL++    +LG+YGIRVN
Sbjct:   124 KHAARAMVEKGTRGSIVCTTSVSAEIGG-GHHGYTASKHGLVGLIRSACGDLGKYGIRVN 182

Query:   190 CVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQ 249
              V+PY +AT M+    V    +E      G LKG  LK   +A  AL+LASD+S+Y+SGQ
Sbjct:   183 GVAPYAVATPMTSHDEVTGKQLEDYFDAKGILKGMVLKASHVAQVALFLASDDSAYISGQ 242

Query:   250 NLVVDGGFSVVNPT 263
             NL VDGG++VV P+
Sbjct:   243 NLAVDGGYTVVKPS 256

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2125452 AT4G03140 [Arabidopsis thaliana (taxid:3702)]

 Score = 506 (183.2 bits), Expect = 1.8e-48, P = 1.8e-48
 Identities = 107/262 (40%), Positives = 153/262 (58%)

Query:     5 SSAAPFKRLEGKVXXXXXXXXXXXXXXVELFHENGAKVVIADVQDKLGEDLADKLGQDVC 64
             SS +  ++LEGKV                 F  +GAKV+IAD+Q ++G +   +LG    
Sbjct:    70 SSHSTSRKLEGKVALITGGASGIGKATAGKFISHGAKVIIADIQPQIGRETEQELGPSCA 129

Query:    65 YIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTI 124
             Y  CD++ E ++ N VD AVS   KLDIMYNNAGI  ++  SI+D   +  +++IN N  
Sbjct:   130 YFPCDVTKESDIANAVDFAVSLHTKLDIMYNNAGIPCKTPPSIVDLDLNVFDKVINTNVR 189

Query:   125 GGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQY 184
             G   G KHAARVM+P+  G I+   S    + GL    Y++SK  ++G+V+  A+EL ++
Sbjct:   190 GVMAGIKHAARVMIPRNSGSIICAGSVTGMMGGLAQHTYSVSKSAVIGIVRSTASELCKH 249

Query:   185 GIRVNCVSPYGLATGMSMKG------GVDPALIESSMSQMGNLKGEFLKTDGIANAALYL 238
              IRVNC+SP+ + T   M        GVD + +   +   G L GE  +   +ANAA+YL
Sbjct:   250 RIRVNCISPFAITTSFVMDEMRQIYPGVDDSRLIQIVQSTGVLNGEVCEPTDVANAAVYL 309

Query:   239 ASDESSYVSGQNLVVDGGFSVV 260
             ASD+S YV+G NLVVDGGF+ V
Sbjct:   310 ASDDSKYVNGHNLVVDGGFTTV 331

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2088399 AT3G26770 [Arabidopsis thaliana (taxid:3702)]

 Score = 470 (170.5 bits), Expect = 1.2e-44, P = 1.2e-44
 Identities = 100/255 (39%), Positives = 150/255 (58%)

Query:    11 KRLEGKVXXXXXXXXXXXXXXVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDI 70
             K+LEGKV                 F  +GA+VVIAD+  + G   A +LG +  ++ CD+
Sbjct:    39 KKLEGKVALITGGASGLGKATASEFLRHGARVVIADLDAETGTKTAKELGSEAEFVRCDV 98

Query:    71 SNEDEVINLVDTAVSKFGKLDIMYNNAGILD-RSFGSILDTPKSDLERLINVNTIGGFLG 129
             + E ++   V+  V ++GKLD+MYNNAGI+   +  SI     ++ ER++ +N  G   G
Sbjct:    99 TVEADIAGAVEMTVERYGKLDVMYNNAGIVGPMTPASISQLDMTEFERVMRINVFGVVSG 158

Query:   130 AKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVN 189
              KHAA+ M+P + GCIL T+S      GL   +YTISK+   G+VK  A+EL ++G+R+N
Sbjct:   159 IKHAAKFMIPARSGCILCTSSVAGVTGGLAPHSYTISKFTTPGIVKSAASELCEHGVRIN 218

Query:   190 CVSPYGLATGMSMK--GGVDPALIESSMSQ----MGNLKGEFLKTDGIANAALYLASDES 243
             C+SP  +AT +++     V P + E  + +    MG LKG   +   +A AALYLAS++ 
Sbjct:   219 CISPGTVATPLTLSYLQKVFPKVSEEKLRETVKGMGELKGAECEEADVAKAALYLASNDG 278

Query:   244 SYVSGQNLVVDGGFS 258
              YV+G NLVVDGG +
Sbjct:   279 KYVTGHNLVVDGGMT 293

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0010089 "xylem development" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

TAIR|locus:2088419 AT3G26760 [Arabidopsis thaliana (taxid:3702)]

 Score = 460 (167.0 bits), Expect = 1.3e-43, P = 1.3e-43
 Identities = 99/257 (38%), Positives = 155/257 (60%)

Query:    11 KRLEGKVXXXXXXXXXXXXXXVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDI 70
             ++LEGKV               E F   GA+V+I D+ ++ G  +A +LG    ++ CD+
Sbjct:    34 RKLEGKVAVITGGASGIGKATAEEFVSQGAQVIIVDIDEEAGHMVATELGSAAHFLRCDV 93

Query:    71 SNEDEVINLVDTAVSKFGKLDIMYNNAGI-LDRSFGSILDTPKSDLERLINVNTIGGFLG 129
             + E+++   V+TAV++ GKLD+M N+AGI    S  SI D      ++++ +N  G  LG
Sbjct:    94 TEEEQIAKAVETAVTRHGKLDVMLNSAGISCSISPPSIADLDMDTYDKVMRLNVRGTVLG 153

Query:   130 AKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVN 189
              KHAAR M+P   G IL  +S    + GLG  AY+ISK+ I G+VK +A+EL ++G+R+N
Sbjct:   154 IKHAARAMIPAGSGSILCLSSISGLMGGLGPHAYSISKFTIPGVVKTVASELCKHGLRIN 213

Query:   190 CVSPYGLATGMSMK------GG--VDPALIESSMSQMGNLKGEFLKTDGIANAALYLASD 241
             C+SP G+ T ++++       G  +    + + ++  G LKGE  +   +A AALYLASD
Sbjct:   214 CISPAGIPTPLTLRMFREAFAGHSIREEQLLAIVNATGELKGEKCEEIDVAKAALYLASD 273

Query:   242 ESSYVSGQNLVVDGGFS 258
             ++ +V+G NLVVDGGF+
Sbjct:   274 DAKFVTGHNLVVDGGFT 290

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0008270 "zinc ion binding" evidence=IDA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009741 "response to brassinosteroid stimulus" evidence=RCA

GO:0005739 "mitochondrion" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9X248	FABG_THEMA	1, ., 1, ., 1, ., 1, 0, 0	0.3466	0.8897	0.9837	yes	no
Q8KWS9	BACC_BACAM	1, ., -, ., -, ., -	0.3643	0.8823	0.9448	yes	no
Q9Z8P2	FABG_CHLPN	1, ., 1, ., 1, ., 1, 0, 0	0.3307	0.8419	0.9233	yes	no
Q8JZV9	BDH2_MOUSE	1, ., 1, ., 1, ., 3, 0	0.3026	0.8455	0.9387	yes	no
Q94K41	SDR3B_ARATH	1, ., 1, ., 1, ., -	0.5294	0.9227	0.9766	yes	no
Q7FAE1	MOMAS_ORYSJ	1, ., 1, ., 1, ., 2, 9, 5	0.5230	0.9448	0.9379	yes	no
P69166	HSD_MYCBO	1, ., 1, ., 1, ., 5, 3	0.3673	0.8602	0.9	yes	no
P69167	HSD_MYCTU	1, ., 1, ., 1, ., 5, 3	0.3673	0.8602	0.9	yes	no
D4A1J4	BDH2_RAT	1, ., 1, ., 1, ., 3, 0	0.3228	0.8713	0.9673	yes	no
Q9PKF7	FABG_CHLMU	1, ., 1, ., 1, ., 1, 0, 0	0.3574	0.8345	0.9153	yes	no
P39640	BACC_BACSU	1, ., -, ., -, ., -	0.3657	0.8823	0.9486	yes	no
Q937L4	CPNA_COMTE	1, ., 1, ., 1, ., 1, 6, 3	0.3266	0.8897	0.968	yes	no
Q3T046	BDH2_BOVIN	1, ., 1, ., 1, ., 3, 0	0.3149	0.8713	0.9673	yes	no
P38004	FABG_CHLTR	1, ., 1, ., 1, ., 1, 0, 0	0.3384	0.8345	0.9153	yes	no
Q8KWT4	BACC2_BACIU	1, ., -, ., -, ., -	0.3710	0.8786	0.9446	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	0.963
4th Layer	1.1.1.101	LOW CONFIDENCE prediction!
4th Layer	1.1.1.250	LOW CONFIDENCE prediction!
4th Layer	1.1.1.269	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	eugene3.00061408	hypothetical protein (274 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	eugene3.00081696	hypothetical protein (214 aa)			•						0.463
	fgenesh4_pg.C_LG_X000525	hypothetical protein (322 aa)			•						0.460

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	272
cd05326	249	cd05326, secoisolariciresinol-DH_like_SDR_c, secoi	1e-104
PLN02253	280	PLN02253, PLN02253, xanthoxin dehydrogenase	5e-96
cd05233	234	cd05233, SDR_c, classical (c) SDRs	2e-67
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	8e-65
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-64
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	6e-59
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	8e-58
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	1e-56
cd05345	248	cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl	3e-56
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	1e-55
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	7e-54
PRK07478	254	PRK07478, PRK07478, short chain dehydrogenase; Pro	5e-53
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	9e-53
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	1e-52
PRK06057	255	PRK06057, PRK06057, short chain dehydrogenase; Pro	1e-52
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	6e-52
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	1e-51
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	6e-51
PRK06398	258	PRK06398, PRK06398, aldose dehydrogenase; Validate	1e-49
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	2e-49
PRK06172	253	PRK06172, PRK06172, short chain dehydrogenase; Pro	2e-49
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-49
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	6e-49
PRK06138	252	PRK06138, PRK06138, short chain dehydrogenase; Pro	7e-49
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	4e-48
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	4e-48
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	6e-48
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	7e-44
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	7e-44
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	1e-43
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	1e-43
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	2e-43
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	2e-43
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	4e-43
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	5e-43
PRK12743	256	PRK12743, PRK12743, oxidoreductase; Provisional	1e-42
TIGR03971	265	TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil	4e-41
PRK08265	261	PRK08265, PRK08265, short chain dehydrogenase; Pro	5e-41
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	5e-41
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	9e-41
PRK06200	263	PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny	9e-41
cd05364	253	cd05364, SDR_c11, classical (c) SDR, subgroup 11	9e-41
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	1e-40
PRK06935	258	PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog	1e-40
PRK12384	259	PRK12384, PRK12384, sorbitol-6-phosphate dehydroge	2e-40
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	6e-40
cd09761	242	cd09761, A3DFK9-like_SDR_c, Clostridium thermocell	8e-40
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	2e-39
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-39
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	5e-39
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	6e-39
PRK06550	235	PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein)	6e-39
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	7e-39
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	8e-39
cd05371	252	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr	1e-38
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	2e-38
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	5e-38
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	1e-37
TIGR02632	676	TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate	2e-37
cd05330	257	cd05330, cyclohexanol_reductase_SDR_c, cyclohexano	5e-37
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	6e-37
PRK07825	273	PRK07825, PRK07825, short chain dehydrogenase; Pro	8e-37
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	9e-37
PRK06500	249	PRK06500, PRK06500, short chain dehydrogenase; Pro	9e-37
PRK06124	256	PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro	1e-36
PRK07060	245	PRK07060, PRK07060, short chain dehydrogenase; Pro	1e-36
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	4e-36
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	5e-36
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	9e-36
cd05348	257	cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro	1e-35
cd05353	250	cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-	1e-35
TIGR01832	248	TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena	2e-35
PRK05867	253	PRK05867, PRK05867, short chain dehydrogenase; Pro	2e-35
PRK06114	254	PRK06114, PRK06114, short chain dehydrogenase; Pro	3e-35
PRK07856	252	PRK07856, PRK07856, short chain dehydrogenase; Pro	6e-35
cd05349	246	cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl	8e-35
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	1e-34
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	2e-34
cd05368	241	cd05368, DHRS6_like_SDR_c, human DHRS6-like, class	2e-34
PRK07774	250	PRK07774, PRK07774, short chain dehydrogenase; Pro	3e-34
PRK08628	258	PRK08628, PRK08628, short chain dehydrogenase; Pro	5e-34
PRK07035	252	PRK07035, PRK07035, short chain dehydrogenase; Pro	6e-34
cd05355	270	cd05355, SDR_c1, classical (c) SDR, subgroup 1	1e-33
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	2e-33
PRK08217	253	PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-33
PRK07890	258	PRK07890, PRK07890, short chain dehydrogenase; Pro	4e-33
cd08933	261	cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl	5e-33
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	6e-33
PRK07069	251	PRK07069, PRK07069, short chain dehydrogenase; Val	6e-33
PRK12937	245	PRK12937, PRK12937, short chain dehydrogenase; Pro	1e-32
PRK06113	255	PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro	1e-32
PRK12935	247	PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro	2e-32
PRK12481	251	PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrog	3e-32
cd05363	254	cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH),	5e-32
cd05359	242	cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c	5e-32
PRK07097	265	PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro	6e-32
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	2e-31
cd08937	256	cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa	2e-31
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	3e-31
cd05322	257	cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehy	3e-31
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	5e-31
PRK13394	262	PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas	5e-31
TIGR03206	250	TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy	5e-31
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	9e-31
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	1e-30
cd08935	271	cd08935, mannonate_red_SDR_c, putative D-mannonate	2e-30
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	2e-30
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	2e-30
cd05331	244	cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz	3e-30
cd05337	255	cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl	5e-30
cd08936	256	cd08936, CR_SDR_c, Porcine peroxisomal carbonyl re	1e-29
PRK07831	262	PRK07831, PRK07831, short chain dehydrogenase; Pro	1e-29
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	2e-29
PRK07074	257	PRK07074, PRK07074, short chain dehydrogenase; Pro	7e-29
PRK08277	278	PRK08277, PRK08277, D-mannonate oxidoreductase; Pr	1e-28
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	2e-28
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	2e-28
PRK06123	248	PRK06123, PRK06123, short chain dehydrogenase; Pro	2e-28
PRK06701	290	PRK06701, PRK06701, short chain dehydrogenase; Pro	2e-28
PRK05872	296	PRK05872, PRK05872, short chain dehydrogenase; Pro	2e-28
PRK12936	245	PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote	3e-28
PRK08993	253	PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrog	7e-28
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-27
PRK08642	253	PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-27
PRK08643	256	PRK08643, PRK08643, acetoin reductase; Validated	9e-27
PRK06947	248	PRK06947, PRK06947, glucose-1-dehydrogenase; Provi	1e-26
PRK12823	260	PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1	1e-26
PRK05717	255	PRK05717, PRK05717, oxidoreductase; Validated	1e-26
cd05373	238	cd05373, SDR_c10, classical (c) SDR, subgroup 10	2e-26
PRK08267	260	PRK08267, PRK08267, short chain dehydrogenase; Pro	2e-26
TIGR03325	262	TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-	3e-26
pfam13561	239	pfam13561, adh_short_C2, Enoyl-(Acyl carrier prote	4e-26
PRK07814	263	PRK07814, PRK07814, short chain dehydrogenase; Pro	4e-26
PRK06523	260	PRK06523, PRK06523, short chain dehydrogenase; Pro	5e-26
PRK05855	582	PRK05855, PRK05855, short chain dehydrogenase; Val	5e-26
PRK08063	250	PRK08063, PRK08063, enoyl-(acyl carrier protein) r	7e-26
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	9e-26
cd05357	234	cd05357, PR_SDR_c, pteridine reductase (PR), class	9e-26
PRK07791	286	PRK07791, PRK07791, short chain dehydrogenase; Pro	1e-25
PRK07523	255	PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro	1e-25
PRK12745	256	PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote	3e-25
PRK12742	237	PRK12742, PRK12742, oxidoreductase; Provisional	4e-25
PRK05650	270	PRK05650, PRK05650, short chain dehydrogenase; Pro	5e-25
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	5e-25
PRK08085	254	PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro	8e-25
PRK07454	241	PRK07454, PRK07454, short chain dehydrogenase; Pro	1e-24
PRK09135	249	PRK09135, PRK09135, pteridine reductase; Provision	2e-24
PRK07677	252	PRK07677, PRK07677, short chain dehydrogenase; Pro	4e-24
cd05360	233	cd05360, SDR_c3, classical (c) SDR, subgroup 3	5e-24
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	9e-24
cd08931	227	cd08931, SDR_c9, classical (c) SDR, subgroup 9	1e-23
TIGR01829	242	TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta	3e-23
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	5e-23
PRK06194	287	PRK06194, PRK06194, hypothetical protein; Provisio	6e-23
PRK05876	275	PRK05876, PRK05876, short chain dehydrogenase; Pro	6e-23
COG0623	259	COG0623, FabI, Enoyl-[acyl-carrier-protein]	7e-23
cd05372	250	cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP)	1e-22
PRK08263	275	PRK08263, PRK08263, short chain dehydrogenase; Pro	7e-22
PRK07792	306	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein)	7e-22
PRK07062	265	PRK07062, PRK07062, short chain dehydrogenase; Pro	2e-21
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	3e-21
cd05343	250	cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c	4e-21
PRK05875	276	PRK05875, PRK05875, short chain dehydrogenase; Pro	4e-21
PRK06139	330	PRK06139, PRK06139, short chain dehydrogenase; Pro	5e-21
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	7e-21
PRK08261	450	PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-20
cd08942	250	cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy	4e-20
PRK06077	252	PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein)	9e-20
PRK06128	300	PRK06128, PRK06128, oxidoreductase; Provisional	1e-19
cd09762	243	cd09762, HSDL2_SDR_c, human hydroxysteroid dehydro	1e-19
PRK06949	258	PRK06949, PRK06949, short chain dehydrogenase; Pro	2e-19
cd05356	239	cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst	4e-19
PRK07109	334	PRK07109, PRK07109, short chain dehydrogenase; Pro	7e-19
PRK09730	247	PRK09730, PRK09730, putative NAD(P)-binding oxidor	9e-19
PRK12746	254	PRK12746, PRK12746, short chain dehydrogenase; Pro	2e-18
PRK08278	273	PRK08278, PRK08278, short chain dehydrogenase; Pro	2e-18
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	3e-18
PRK07832	272	PRK07832, PRK07832, short chain dehydrogenase; Pro	7e-18
PRK12859	256	PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-prote	8e-17
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	8e-17
PRK06182	273	PRK06182, PRK06182, short chain dehydrogenase; Val	2e-16
cd05328	250	cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid de	2e-16
PRK08416	260	PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydro	2e-16
PRK07775	274	PRK07775, PRK07775, short chain dehydrogenase; Pro	4e-16
cd05350	239	cd05350, SDR_c6, classical (c) SDR, subgroup 6	4e-16
PRK07985	294	PRK07985, PRK07985, oxidoreductase; Provisional	4e-16
PRK08945	247	PRK08945, PRK08945, putative oxoacyl-(acyl carrier	7e-16
cd09763	265	cd09763, DHRS1-like_SDR_c, human dehydrogenase/red	8e-16
PRK05866	293	PRK05866, PRK05866, short chain dehydrogenase; Pro	1e-15
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	1e-15
PRK08594	257	PRK08594, PRK08594, enoyl-(acyl carrier protein) r	2e-15
PRK12747	252	PRK12747, PRK12747, short chain dehydrogenase; Pro	2e-15
PRK07576	264	PRK07576, PRK07576, short chain dehydrogenase; Pro	2e-15
cd08945	258	cd08945, PKR_SDR_c, Polyketide ketoreductase, clas	3e-15
PRK07533	258	PRK07533, PRK07533, enoyl-(acyl carrier protein) r	5e-15
TIGR02685	267	TIGR02685, pter_reduc_Leis, pteridine reductase	5e-15
cd05340	236	cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li	6e-15
PRK09291	257	PRK09291, PRK09291, short chain dehydrogenase; Pro	1e-14
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	2e-14
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	2e-14
PRK06179	270	PRK06179, PRK06179, short chain dehydrogenase; Pro	3e-14
PRK12938	246	PRK12938, PRK12938, acetyacetyl-CoA reductase; Pro	3e-14
PRK08264	238	PRK08264, PRK08264, short chain dehydrogenase; Val	3e-14
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	7e-14
PRK09072	263	PRK09072, PRK09072, short chain dehydrogenase; Pro	3e-13
PRK12744	257	PRK12744, PRK12744, short chain dehydrogenase; Pro	4e-13
TIGR01831	239	TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-prote	1e-12
PRK06482	276	PRK06482, PRK06482, short chain dehydrogenase; Pro	1e-12
PRK12748	256	PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-prote	2e-12
PRK05786	238	PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-12
PRK07370	258	PRK07370, PRK07370, enoyl-(acyl carrier protein) r	5e-12
cd09805	281	cd09805, type2_17beta_HSD-like_SDR_c, human 17beta	6e-12
cd05367	241	cd05367, SPR-like_SDR_c, sepiapterin reductase (SP	6e-12
cd05354	235	cd05354, SDR_c7, classical (c) SDR, subgroup 7	6e-12
PRK08690	261	PRK08690, PRK08690, enoyl-(acyl carrier protein) r	7e-12
PRK08159	272	PRK08159, PRK08159, enoyl-(acyl carrier protein) r	8e-12
PRK06505	271	PRK06505, PRK06505, enoyl-(acyl carrier protein) r	9e-12
cd11731	198	cd11731, Lin1944_like_SDR_c, Lin1944 and related p	9e-12
PRK08415	274	PRK08415, PRK08415, enoyl-(acyl carrier protein) r	2e-11
PRK07577	234	PRK07577, PRK07577, short chain dehydrogenase; Pro	5e-11
PRK06914	280	PRK06914, PRK06914, short chain dehydrogenase; Pro	8e-11
COG3967	245	COG3967, DltE, Short-chain dehydrogenase involved	9e-11
PRK06720	169	PRK06720, PRK06720, hypothetical protein; Provisio	9e-11
PRK06079	252	PRK06079, PRK06079, enoyl-(acyl carrier protein) r	1e-10
PRK09134	258	PRK09134, PRK09134, short chain dehydrogenase; Pro	4e-10
PRK05993	277	PRK05993, PRK05993, short chain dehydrogenase; Pro	4e-10
PRK06125	259	PRK06125, PRK06125, short chain dehydrogenase; Pro	5e-10
PRK07806	248	PRK07806, PRK07806, short chain dehydrogenase; Pro	8e-10
PRK05693	274	PRK05693, PRK05693, short chain dehydrogenase; Pro	1e-09
PRK07041	230	PRK07041, PRK07041, short chain dehydrogenase; Pro	2e-09
cd05361	242	cd05361, haloalcohol_DH_SDR_c-like, haloalcohol de	4e-09
cd05334	221	cd05334, DHPR_SDR_c_like, dihydropteridine reducta	2e-08
cd08953	436	cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup	3e-08
PRK08219	227	PRK08219, PRK08219, short chain dehydrogenase; Pro	4e-08
PRK06197	306	PRK06197, PRK06197, short chain dehydrogenase; Pro	4e-08
PRK06940	275	PRK06940, PRK06940, short chain dehydrogenase; Pro	5e-08
PRK12428	241	PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydro	6e-08
PRK07984	262	PRK07984, PRK07984, enoyl-(acyl carrier protein) r	8e-08
PRK08339	263	PRK08339, PRK08339, short chain dehydrogenase; Pro	8e-08
PRK07889	256	PRK07889, PRK07889, enoyl-(acyl carrier protein) r	9e-08
cd08951	260	cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13	1e-07
cd09810	311	cd09810, LPOR_like_SDR_c_like, light-dependent pro	5e-07
cd02266	186	cd02266, SDR, Short-chain dehydrogenases/reductase	5e-07
PRK06603	260	PRK06603, PRK06603, enoyl-(acyl carrier protein) r	7e-07
cd09806	258	cd09806, type1_17beta-HSD-like_SDR_c, human estrog	1e-06
PRK08017	256	PRK08017, PRK08017, oxidoreductase; Provisional	2e-06
PRK06196	315	PRK06196, PRK06196, oxidoreductase; Provisional	6e-06
PRK08251	248	PRK08251, PRK08251, short chain dehydrogenase; Pro	2e-05
PRK07024	257	PRK07024, PRK07024, short chain dehydrogenase; Pro	2e-05
cd11730	206	cd11730, Tthb094_like_SDR_c, Tthb094 and related p	2e-05
smart00822	180	smart00822, PKS_KR, This enzymatic domain is part	2e-05
pfam08659	181	pfam08659, KR, KR domain	3e-05
cd09807	274	cd09807, retinol-DH_like_SDR_c, retinol dehydrogen	3e-05
PRK10538	248	PRK10538, PRK10538, malonic semialdehyde reductase	4e-05
cd08941	290	cd08941, 3KS_SDR_c, 3-keto steroid reductase, clas	2e-04
PRK06997	260	PRK06997, PRK06997, enoyl-(acyl carrier protein) r	4e-04
PRK08340	259	PRK08340, PRK08340, glucose-1-dehydrogenase; Provi	4e-04
cd09809	284	cd09809, human_WWOX_like_SDR_c-like, human WWOX (W	5e-04
cd05258	337	cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, e	0.002
PRK07453	322	PRK07453, PRK07453, protochlorophyllide oxidoreduc	0.002
PRK07424	406	PRK07424, PRK07424, bifunctional sterol desaturase	0.002
PRK06924	251	PRK06924, PRK06924, short chain dehydrogenase; Pro	0.002
PLN02780	320	PLN02780, PLN02780, ketoreductase/ oxidoreductase	0.002
PRK08303	305	PRK08303, PRK08303, short chain dehydrogenase; Pro	0.002
TIGR02824	325	TIGR02824, quinone_pig3, putative NAD(P)H quinone	0.003
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	0.003

>gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs

 Score =  303 bits (778), Expect = e-104
 Identities = 137/249 (55%), Positives = 179/249 (71%), Gaps = 2/249 (0%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLG-QDVCYIHCDI 70
           RL+GKVAIITGGASGIG     LF ++GA+VVIAD+ D  G+ +A +LG  D+ ++HCD+
Sbjct: 1   RLDGKVAIITGGASGIGEATARLFAKHGARVVIADIDDDAGQAVAAELGDPDISFVHCDV 60

Query: 71  SNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGA 130
           + E +V   VDTAV++FG+LDIM+NNAG+L     SIL+T   + ER+++VN  G FLG 
Sbjct: 61  TVEADVRAAVDTAVARFGRLDIMFNNAGVLGAPCYSILETSLEEFERVLDVNVYGAFLGT 120

Query: 131 KHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNC 190
           KHAARVM+P +KG I+  AS    + GLG  AYT SK+ +LGL +  A ELG++GIRVNC
Sbjct: 121 KHAARVMIPAKKGSIVSVASVAGVVGGLGPHAYTASKHAVLGLTRSAATELGEHGIRVNC 180

Query: 191 VSPYGLATGMSMKG-GVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQ 249
           VSPYG+AT +   G GV+   IE ++    NLKG  L+ + IA A LYLASD+S YVSGQ
Sbjct: 181 VSPYGVATPLLTAGFGVEDEAIEEAVRGAANLKGTALRPEDIAAAVLYLASDDSRYVSGQ 240

Query: 250 NLVVDGGFS 258
           NLVVDGG +
Sbjct: 241 NLVVDGGLT 249

Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase

 Score =  283 bits (725), Expect = 5e-96
 Identities = 131/273 (47%), Positives = 179/273 (65%), Gaps = 12/273 (4%)

Query: 1   MNGPSSAA---PFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLAD 57
           M   SS+A   P +RL GKVA++TGGA+GIG   V LFH++GAKV I D+QD LG+++ D
Sbjct: 1   MATASSSASSLPSQRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCD 60

Query: 58  KLG--QDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDL 115
            LG   +VC+ HCD++ ED+V   VD  V KFG LDIM NNAG+       I +   S+ 
Sbjct: 61  SLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEF 120

Query: 116 ERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVK 175
           E++ +VN  G FLG KHAAR+M+P +KG I+   S  + I GLG  AYT SK+ +LGL +
Sbjct: 121 EKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLGPHAYTGSKHAVLGLTR 180

Query: 176 CLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQM-------GNLKGEFLKT 228
            +AAELG++GIRVNCVSPY + T +++    +    E +++          NLKG  L  
Sbjct: 181 SVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANLKGVELTV 240

Query: 229 DGIANAALYLASDESSYVSGQNLVVDGGFSVVN 261
           D +ANA L+LASDE+ Y+SG NL++DGGF+  N
Sbjct: 241 DDVANAVLFLASDEARYISGLNLMIDGGFTCTN 273

Length = 280

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score =  209 bits (533), Expect = 2e-67
 Identities = 88/239 (36%), Positives = 130/239 (54%), Gaps = 7/239 (2%)

Query: 18  AIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLAD--KLGQDVCYIHCDISNEDE 75
           A++TG +SGIG          GAKVV+AD  ++   +LA    LG +   +  D+S+E++
Sbjct: 1   ALVTGASSGIGRAIARRLAREGAKVVLADRNEEALAELAAIEALGGNAVAVQADVSDEED 60

Query: 76  VINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAAR 135
           V  LV+ A+ +FG+LDI+ NNAGI     G + +    D +R+++VN  G FL  + A  
Sbjct: 61  VEALVEEALEEFGRLDILVNNAGIA--RPGPLEELTDEDWDRVLDVNLTGVFLLTRAALP 118

Query: 136 VMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYG 195
            M  Q  G I+  +S        G  AY  SK  + GL + LA EL  YGIRVN V+P  
Sbjct: 119 HMKKQGGGRIVNISSVAGLRPLPGQAAYAASKAALEGLTRSLALELAPYGIRVNAVAPGL 178

Query: 196 LATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVD 254
           + T M  K G + A  E + +      G     + +A A ++LASDE+SY++GQ + VD
Sbjct: 179 VDTPMLAKLGPEEAEKELAAA---IPLGRLGTPEEVAEAVVFLASDEASYITGQVIPVD 234

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  202 bits (516), Expect = 8e-65
 Identities = 92/253 (36%), Positives = 142/253 (56%), Gaps = 10/253 (3%)

Query: 11  KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIA-DVQDKLGEDLADKL---GQDVCYI 66
            +L GKVAI+TG + GIG    EL  + GAKVVIA D+ ++  ++L +++   G D   +
Sbjct: 1   MKLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAV 60

Query: 67  HCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGG 126
             D+S+E++V NLV+  V KFGK+DI+ NNAGI   +FG + D    + +R+I+VN  G 
Sbjct: 61  KADVSSEEDVENLVEQIVEKFGKIDILVNNAGIS--NFGLVTDMTDEEWDRVIDVNLTGV 118

Query: 127 FLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGI 186
            L  ++A   M+ ++ G I+  +S    I       Y+ SK  +    K LA EL   GI
Sbjct: 119 MLLTRYALPYMIKRKSGVIVNISSIWGLIGASCEVLYSASKGAVNAFTKALAKELAPSGI 178

Query: 187 RVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYV 246
           RVN V+P  + T M           +  +++     G   K + IA   L+LASD++SY+
Sbjct: 179 RVNAVAPGAIDTEM---WSSFSEEDKEGLAEEI-PLGRLGKPEEIAKVVLFLASDDASYI 234

Query: 247 SGQNLVVDGGFSV 259
           +GQ + VDGG++ 
Sbjct: 235 TGQIITVDGGWTC 247

Length = 247

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  201 bits (513), Expect = 3e-64
 Identities = 96/257 (37%), Positives = 135/257 (52%), Gaps = 13/257 (5%)

Query: 11  KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQD--VCYIHC 68
            RLEGKVAI+TG +SGIG      F   GA+VV+ D  ++  E +A ++        +  
Sbjct: 1   MRLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAA 60

Query: 69  DISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFL 128
           D+S+E +V   V  A+ +FG +DI+ NNAG   R  G +LD  +++ +R+  VN    +L
Sbjct: 61  DVSDEADVEAAVAAALERFGSVDILVNNAGTTHR-NGPLLDVDEAEFDRIFAVNVKSPYL 119

Query: 129 GAKHAARVMVPQQKGCILFTASACTEIAGL-GSP---AYTISKYGILGLVKCLAAELGQY 184
             + A   M  +  G I+  AS     AGL   P    Y  SK  ++ L K LAAELG  
Sbjct: 120 WTQAAVPAMRGEGGGAIVNVAS----TAGLRPRPGLGWYNASKGAVITLTKALAAELGPD 175

Query: 185 GIRVNCVSPYGLATGMSMKG-GVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDES 243
            IRVN V+P  + TG+     G       +       L G     + IANAAL+LASDE+
Sbjct: 176 KIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLATIPL-GRLGTPEDIANAALFLASDEA 234

Query: 244 SYVSGQNLVVDGGFSVV 260
           S+++G  LVVDGG  V 
Sbjct: 235 SWITGVTLVVDGGRCVG 251

Length = 251

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  187 bits (477), Expect = 6e-59
 Identities = 85/252 (33%), Positives = 130/252 (51%), Gaps = 15/252 (5%)

Query: 11  KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIH 67
             L+GK A++TG + GIG         +GAKVVI D  ++  E LA +L   G +   + 
Sbjct: 1   MSLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLV 60

Query: 68  CDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGF 127
            D+S+E  V  L++ AV  FG LDI+ NNAGI       +    + D +R+I+VN  G F
Sbjct: 61  FDVSDEAAVRALIEAAVEAFGALDILVNNAGIT--RDALLPRMSEEDWDRVIDVNLTGTF 118

Query: 128 LGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIR 187
              + A   M+  + G I+  +S        G   Y+ +K G++G  K LA EL   GI 
Sbjct: 119 NVVRAALPPMIKARYGRIVNISSVSGVTGNPGQTNYSAAKAGVIGFTKALALELASRGIT 178

Query: 188 VNCVSPYGLATGMSMKGGVDP---ALIESSMSQMGNLKGEFLKTDGIANAALYLASDESS 244
           VN V+P  + T M+     +     L E  + ++G       + + +ANA  +LASD +S
Sbjct: 179 VNAVAPGFIDTDMTEGLPEEVKAEILKEIPLGRLG-------QPEEVANAVAFLASDAAS 231

Query: 245 YVSGQNLVVDGG 256
           Y++GQ + V+GG
Sbjct: 232 YITGQVIPVNGG 243

Length = 246

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score =  184 bits (470), Expect = 8e-58
 Identities = 98/253 (38%), Positives = 137/253 (54%), Gaps = 9/253 (3%)

Query: 11  KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDI 70
            RL+GKVAI+TGGA G+G     L    GAKVV++D+ D+ G+  A +LG    + H D+
Sbjct: 1   NRLKGKVAIVTGGARGLGLAHARLLVAEGAKVVLSDILDEEGQAAAAELGDAARFFHLDV 60

Query: 71  SNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGA 130
           ++ED    +VDTA   FG+LD++ NNAGIL  + G++  T   +  RL+++N  G FLG 
Sbjct: 61  TDEDGWTAVVDTAREAFGRLDVLVNNAGIL--TGGTVETTTLEEWRRLLDINLTGVFLGT 118

Query: 131 KHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQ--YGIRV 188
           +     M     G I+  +S    +      AY  SK  + GL K  A E     YGIRV
Sbjct: 119 RAVIPPMKEAGGGSIINMSSIEGLVGDPALAAYNASKGAVRGLTKSAALECATQGYGIRV 178

Query: 189 NCVSPYGLATGMSMKGGVDPALIESSMSQMGNLK-GEFLKTDGIANAALYLASDESSYVS 247
           N V P  + T M+ +  +        M    N   G   + D IA A +YLASDESS+V+
Sbjct: 179 NSVHPGYIYTPMTDELLIAQG----EMGNYPNTPMGRAGEPDEIAYAVVYLASDESSFVT 234

Query: 248 GQNLVVDGGFSVV 260
           G  LVVDGG++  
Sbjct: 235 GSELVVDGGYTAG 247

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score =  181 bits (462), Expect = 1e-56
 Identities = 85/255 (33%), Positives = 124/255 (48%), Gaps = 13/255 (5%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIA------DVQDKLGEDLADKLGQDVCY 65
            L GKVA++TG +SGIG          GA+VV+A      +  + L   + +  G     
Sbjct: 2   DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAA 61

Query: 66  IHCDISN-EDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTI 124
           +  D+S+ E+ V  LV  A  +FG++DI+ NNAGI       + +  + D +R+I+VN +
Sbjct: 62  VAADVSDDEESVEALVAAAEEEFGRIDILVNNAGIA-GPDAPLEELTEEDWDRVIDVNLL 120

Query: 125 GGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQY 184
           G FL  + A  +M   +K  I+  +S        G  AY  SK  ++GL K LA EL   
Sbjct: 121 GAFLLTRAALPLM---KKQRIVNISSVAGLGGPPGQAAYAASKAALIGLTKALALELAPR 177

Query: 185 GIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASD-ES 243
           GIRVN V+P  + T M         L            G     + +A A  +LASD  +
Sbjct: 178 GIRVNAVAPGYIDTPM-TAALESAELEALKRLAARIPLGRLGTPEEVAAAVAFLASDEAA 236

Query: 244 SYVSGQNLVVDGGFS 258
           SY++GQ L VDGG  
Sbjct: 237 SYITGQTLPVDGGLL 251

Length = 251

>gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR

 Score =  180 bits (459), Expect = 3e-56
 Identities = 98/253 (38%), Positives = 134/253 (52%), Gaps = 11/253 (4%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDIS 71
           RLEGKVAI+TG  SG G      F + GA+VVIAD+     E +A  +G+    I  D++
Sbjct: 2   RLEGKVAIVTGAGSGFGEGIARRFAQEGARVVIADINADGAERVAADIGEAAIAIQADVT 61

Query: 72  NEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAK 131
              +V  +V+ A+SKFG+LDI+ NNAGI  R+   +L+  + + +R+  VN    +L A+
Sbjct: 62  KRADVEAMVEAALSKFGRLDILVNNAGITHRN-KPMLEVDEEEFDRVFAVNVKSIYLSAQ 120

Query: 132 HAARVMVPQQKGCILFTASACTEIAGL----GSPAYTISKYGILGLVKCLAAELGQYGIR 187
                M  Q  G I+  AS     AGL    G   Y  SK  ++   K +A EL    IR
Sbjct: 121 ALVPHMEEQGGGVIINIAST----AGLRPRPGLTWYNASKGWVVTATKAMAVELAPRNIR 176

Query: 188 VNCVSPYGLATGM-SMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYV 246
           VNC+ P    T + SM  G D     +       L G     D IANAALYLASDE+S++
Sbjct: 177 VNCLCPVAGETPLLSMFMGEDTPENRAKFRATIPL-GRLSTPDDIANAALYLASDEASFI 235

Query: 247 SGQNLVVDGGFSV 259
           +G  L VDGG  +
Sbjct: 236 TGVALEVDGGRCI 248

This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score =  179 bits (456), Expect = 1e-55
 Identities = 80/258 (31%), Positives = 116/258 (44%), Gaps = 23/258 (8%)

Query: 11  KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIH--- 67
           + LEG+VA++TG A GIG         +GA+V++ D+        A+ +           
Sbjct: 2   RDLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQ 61

Query: 68  CDISNEDEVINLVDTAVSKFGKLDIMYNNAGIL-DRSFGSILDTPKSDLERLINVNTIGG 126
            D+ +   +   V   V  FG+LDI+  NAGI     F  + D      ER+I+VN  G 
Sbjct: 62  VDVRDRAALKAAVAAGVEDFGRLDILVANAGIFPLTPFAEMDDE---QWERVIDVNLTGT 118

Query: 127 FLGAKHAARVMVPQQKGCILFTASACTEIAGLGSP-----AYTISKYGILGLVKCLAAEL 181
           FL  + A   ++    G I+ T+S    +AG          Y  SK G++G  + LA EL
Sbjct: 119 FLLTQAALPALIRAGGGRIVLTSS----VAGPRVGYPGLAHYAASKAGLVGFTRALALEL 174

Query: 182 GQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLK--GEFLKTDGIANAALYLA 239
               I VN V P G+ T M                 +      G   + + IA A L+LA
Sbjct: 175 AARNITVNSVHPGGVDTPM-----AGNLGDAQWAEAIAAAIPLGRLGEPEDIAAAVLFLA 229

Query: 240 SDESSYVSGQNLVVDGGF 257
           SDE+ Y++GQ L VDGG 
Sbjct: 230 SDEARYITGQTLPVDGGA 247

Length = 251

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score =  174 bits (444), Expect = 7e-54
 Identities = 90/254 (35%), Positives = 136/254 (53%), Gaps = 15/254 (5%)

Query: 13  LEGKVAIITGGASGIGAMAVELFHENGAKVVI-----ADVQDKLGEDLADKLGQDVCYIH 67
           L+GKVA++TG +SGIG          GA VV+      D  +++ E++    G+ +    
Sbjct: 1   LKGKVALVTGASSGIGKAIAIRLATAGANVVVNYRSKEDAAEEVVEEIKAVGGKAIAV-Q 59

Query: 68  CDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGF 127
            D+S E++V+ L  +A+ +FG LDI+ NNAG+      S   T + D  ++I+VN  G F
Sbjct: 60  ADVSKEEDVVALFQSAIKEFGTLDILVNNAGL-QGDASSHEMTLE-DWNKVIDVNLTGQF 117

Query: 128 LGAKHAARVMV-PQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGI 186
           L A+ A +     + KG I+  +S   +I   G   Y  SK G+  + K LA E    GI
Sbjct: 118 LCAREAIKRFRKSKIKGKIINMSSVHEKIPWPGHVNYAASKGGVKMMTKTLAQEYAPKGI 177

Query: 187 RVNCVSPYGLATGMSMKGGVDPALIES--SMSQMGNLKGEFLKTDGIANAALYLASDESS 244
           RVN ++P  + T ++ +   DP       S+  MG + GE    + IA AA +LASDE+S
Sbjct: 178 RVNAIAPGAINTPINAEAWDDPEQRADLLSLIPMGRI-GE---PEEIAAAAAWLASDEAS 233

Query: 245 YVSGQNLVVDGGFS 258
           YV+G  L VDGG +
Sbjct: 234 YVTGTTLFVDGGMT 247

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional

 Score =  172 bits (438), Expect = 5e-53
 Identities = 101/258 (39%), Positives = 138/258 (53%), Gaps = 17/258 (6%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVI----ADVQDKLGEDLADKLGQDVCYIH 67
           RL GKVAIITG +SGIG  A +LF   GAKVV+        D+L  ++  + G+ V  + 
Sbjct: 3   RLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVA-LA 61

Query: 68  CDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGF 127
            D+ +E     LV  AV +FG LDI +NNAG L    G + +         +  N    F
Sbjct: 62  GDVRDEAYAKALVALAVERFGGLDIAFNNAGTLGEM-GPVAEMSLEGWRETLATNLTSAF 120

Query: 128 LGAKHAARVMVPQQKGCILFTASACTEIAGL-GSPAYTISKYGILGLVKCLAAELGQYGI 186
           LGAKH    M+ +  G ++FT++     AG  G  AY  SK G++GL + LAAE G  GI
Sbjct: 121 LGAKHQIPAMLARGGGSLIFTSTFVGHTAGFPGMAAYAASKAGLIGLTQVLAAEYGAQGI 180

Query: 187 RVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLK----TDGIANAALYLASDE 242
           RVN + P G  T M    G  P     +++ +  L    LK     + IA AAL+LASD 
Sbjct: 181 RVNALLPGGTDTPMGRAMGDTPE----ALAFVAGLHA--LKRMAQPEEIAQAALFLASDA 234

Query: 243 SSYVSGQNLVVDGGFSVV 260
           +S+V+G  L+VDGG S+ 
Sbjct: 235 ASFVTGTALLVDGGVSIT 252

Length = 254

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  171 bits (436), Expect = 9e-53
 Identities = 87/252 (34%), Positives = 130/252 (51%), Gaps = 10/252 (3%)

Query: 11  KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADV-QDKLGEDLAD---KLGQDVCYI 66
             LEGKVA++TG + GIG    E     GA VVI     +   E L      LG     +
Sbjct: 1   MSLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAV 60

Query: 67  HCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGG 126
             D+S+ + V   VD A ++FG +DI+ NNAGI       ++   + D +R+I+ N  G 
Sbjct: 61  QGDVSDAESVERAVDEAKAEFGGVDILVNNAGITRD--NLLMRMKEEDWDRVIDTNLTGV 118

Query: 127 FLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGI 186
           F   K  AR M+ Q+ G I+  +S    +   G   Y  SK G++G  K LA EL   GI
Sbjct: 119 FNLTKAVARPMMKQRSGRIINISSVVGLMGNPGQANYAASKAGVIGFTKSLARELASRGI 178

Query: 187 RVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYV 246
            VN V+P  + T M+    +   + E+ ++Q+    G   + + IA+A  +LASDE++Y+
Sbjct: 179 TVNAVAPGFIETDMTDA--LPEDVKEAILAQIP--LGRLGQPEEIASAVAFLASDEAAYI 234

Query: 247 SGQNLVVDGGFS 258
           +GQ L V+GG  
Sbjct: 235 TGQTLHVNGGMV 246

Length = 248

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score =  171 bits (436), Expect = 1e-52
 Identities = 87/254 (34%), Positives = 125/254 (49%), Gaps = 12/254 (4%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQD----VCYIH 67
            L+GKVAI+TGG+ GIG        E GA V I        E+ A++L +          
Sbjct: 5   SLKGKVAIVTGGSRGIGLAIARALAEAGADVAIIYNSAPRAEEKAEELAKKYGVKTKAYK 64

Query: 68  CDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGF 127
           CD+S+++ V          FGK+DI+  NAGI        LD       ++I+VN  G F
Sbjct: 65  CDVSSQESVEKTFKQIQKDFGKIDILIANAGITVHK--PALDYTYEQWNKVIDVNLNGVF 122

Query: 128 LGAKHAARVMVPQQKGCILFTASACTEIAGLGSP--AYTISKYGILGLVKCLAAELGQYG 185
             A+ AA++   Q KG ++ TAS    I     P  AY  SK  ++ L K LA E  +Y 
Sbjct: 123 NCAQAAAKIFKKQGKGSLIITASMSGTIVNRPQPQAAYNASKAAVIHLAKSLAVEWAKYF 182

Query: 186 IRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSY 245
           IRVN +SP  + T ++    VD  L +   S +          + +  A LYLASD SSY
Sbjct: 183 IRVNSISPGYIDTDLT--DFVDKELRKKWESYIPL--KRIALPEELVGAYLYLASDASSY 238

Query: 246 VSGQNLVVDGGFSV 259
            +G +L++DGG++ 
Sbjct: 239 TTGSDLIIDGGYTC 252

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional

 Score =  171 bits (435), Expect = 1e-52
 Identities = 92/261 (35%), Positives = 140/261 (53%), Gaps = 28/261 (10%)

Query: 11  KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDI 70
           +RL G+VA+ITGG SGIG          GA VV+ D+  + G+  AD++G    ++  D+
Sbjct: 3   QRLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVG--GLFVPTDV 60

Query: 71  SNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGA 130
           ++ED V  L DTA   +G +DI +NNAGI      SIL+T     +R+ +VN    +L  
Sbjct: 61  TDEDAVNALFDTAAETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCC 120

Query: 131 KHAARVMVPQQKGCILFTASACTEIAGLGSP----AYTISKYGILGLVKCLAAELGQYGI 186
           K A   MV Q KG I+ TAS    +A +GS     +YT SK G+L + + L  +  + GI
Sbjct: 121 KAALPHMVRQGKGSIINTASF---VAVMGSATSQISYTASKGGVLAMSRELGVQFARQGI 177

Query: 187 RVNCVSPYGLATGMSMKGGVDPALI--------ESSMSQMGNLK-GEFLKTDGIANAALY 237
           RVN + P          G V+  L+        E +  ++ ++  G F + + IA A  +
Sbjct: 178 RVNALCP----------GPVNTPLLQELFAKDPERAARRLVHVPMGRFAEPEEIAAAVAF 227

Query: 238 LASDESSYVSGQNLVVDGGFS 258
           LASD++S+++    +VDGG S
Sbjct: 228 LASDDASFITASTFLVDGGIS 248

Length = 255

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score =  169 bits (430), Expect = 6e-52
 Identities = 92/259 (35%), Positives = 137/259 (52%), Gaps = 25/259 (9%)

Query: 13  LEGKVAIITGGASGIG-AMAVELFHENGAKVVIAD-VQDKL--GEDLADKLGQDVCYIHC 68
           L+GKVA++TG + GIG  +A  L  E GA +VI    ++K    + L +K G +     C
Sbjct: 3   LKGKVALVTGASRGIGFGIASGL-AEAGANIVINSRNEEKAEEAQQLIEKEGVEATAFTC 61

Query: 69  DISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFL 128
           D+S+E+ +   V+     FGK+DI+ NNAGI+ R      + P+++   +I+VN  G F 
Sbjct: 62  DVSDEEAIKAAVEAIEEDFGKIDILVNNAGIIRRH--PAEEFPEAEWRDVIDVNLNGVFF 119

Query: 129 GAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRV 188
            ++  AR M+ Q  G I+   S  +E+ G   PAY  SK G+ GL K LA E  ++GI+V
Sbjct: 120 VSQAVARHMIKQGHGKIINICSLLSELGGPPVPAYAASKGGVAGLTKALATEWARHGIQV 179

Query: 189 NCVSPYGLATGMSMKGGVDPALIE--------SSMSQMGNLKGEFLKTDGIANAALYLAS 240
           N ++P   AT M+     DP   +            Q  +L G          AA++LAS
Sbjct: 180 NAIAPGYFATEMTEAVVADPEFNDDILKRIPAGRWGQPEDLVG----------AAVFLAS 229

Query: 241 DESSYVSGQNLVVDGGFSV 259
           D S YV+GQ + VDGG+  
Sbjct: 230 DASDYVNGQIIFVDGGWLA 248

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score =  169 bits (430), Expect = 1e-51
 Identities = 93/256 (36%), Positives = 137/256 (53%), Gaps = 21/256 (8%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDIS 71
            L GKVA++TGGASGIG    ELF   GA+V + D  + + E  A  LG +   + CD+S
Sbjct: 12  DLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVS 71

Query: 72  NEDEVINLVDTAVSKFGKLDIMYNNAGI--LDRSFGSILDTPKSDLERLINVNTIGGFLG 129
           +   V   V   +S FG++DI+ N+AG+  L  +     D  + D ++ I++N  G FL 
Sbjct: 72  DSQSVEAAVAAVISAFGRIDILVNSAGVALLAPA----EDVSEEDWDKTIDINLKGSFLM 127

Query: 130 AKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVN 189
           A+   R M+    G I+  AS    +A     AY  SK G++G+ K LA E G YGI VN
Sbjct: 128 AQAVGRHMIAAGGGKIVNLASQAGVVALERHVAYCASKAGVVGMTKVLALEWGPYGITVN 187

Query: 190 CVSPYGLATGMSMKGGVDP------ALIESSMSQMGNLKGEFLKTDGIANAALYLASDES 243
            +SP  + T +  K            LI +         G F   + IA AAL+LASD +
Sbjct: 188 AISPTVVLTELGKKAWAGEKGERAKKLIPA---------GRFAYPEEIAAAALFLASDAA 238

Query: 244 SYVSGQNLVVDGGFSV 259
           + ++G+NLV+DGG+++
Sbjct: 239 AMITGENLVIDGGYTI 254

Length = 255

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score =  167 bits (425), Expect = 6e-51
 Identities = 88/267 (32%), Positives = 130/267 (48%), Gaps = 33/267 (12%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHC 68
            L+GKVA++TG ASGIG        + GAKVVIAD+ D+     A+ L   G     +  
Sbjct: 1   MLKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAM 60

Query: 69  DISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFL 128
           D+++E+ +   +D AV  FG +DI+ NNAGI  +    I D P    +++I +   G FL
Sbjct: 61  DVTDEEAINAGIDYAVETFGGVDILVNNAGI--QHVAPIEDFPTEKWKKMIAIMLDGAFL 118

Query: 129 GAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRV 188
             K A  +M  Q  G I+  AS    +   G  AY  +K+G++GL K +A E   +G+ V
Sbjct: 119 TTKAALPIMKAQGGGRIINMASVHGLVGSAGKAAYVSAKHGLIGLTKVVALEGATHGVTV 178

Query: 189 NCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKG------------------EFLKTDG 230
           N + P          G VD  L+   +  +   +G                   F   + 
Sbjct: 179 NAICP----------GYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKRFTTVEE 228

Query: 231 IANAALYLASDESSYVSGQNLVVDGGF 257
           IA+ AL+LAS  +  V+GQ  VVDGG+
Sbjct: 229 IADYALFLASFAAKGVTGQAWVVDGGW 255

Length = 258

>gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated

 Score =  164 bits (416), Expect = 1e-49
 Identities = 85/260 (32%), Positives = 138/260 (53%), Gaps = 18/260 (6%)

Query: 10  FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCD 69
              L+ KVAI+TGG+ GIG   V    E G+ V+  D+++            DV Y   D
Sbjct: 1   DLGLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEP--SYN------DVDYFKVD 52

Query: 70  ISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLG 129
           +SN+++VI  +D  +SK+G++DI+ NNAGI   S+G+I    + + +R+INVN  G FL 
Sbjct: 53  VSNKEQVIKGIDYVISKYGRIDILVNNAGI--ESYGAIHAVEEDEWDRIINVNVNGIFLM 110

Query: 130 AKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVN 189
           +K+    M+ Q KG I+  AS  +      + AY  SK+ +LGL + +A +     IR  
Sbjct: 111 SKYTIPYMLKQDKGVIINIASVQSFAVTRNAAAYVTSKHAVLGLTRSIAVDYAPT-IRCV 169

Query: 190 CVSPYGLATGM-----SMKGGVDPALIESSMSQMGNLK--GEFLKTDGIANAALYLASDE 242
            V P  + T +      ++ G DP  +E  + + G +       K + +A    +LASD 
Sbjct: 170 AVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMHPMKRVGKPEEVAYVVAFLASDL 229

Query: 243 SSYVSGQNLVVDGGFSVVNP 262
           +S+++G+ + VDGG   + P
Sbjct: 230 ASFITGECVTVDGGLRALIP 249

Length = 258

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score =  172 bits (439), Expect = 2e-49
 Identities = 95/263 (36%), Positives = 128/263 (48%), Gaps = 23/263 (8%)

Query: 11  KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQ--DVCYIHC 68
           K L GKVA++TG A GIG    +     GA VV+AD+ ++  E  A +LG       + C
Sbjct: 418 KPLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVAC 477

Query: 69  DISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFL 128
           D+++E  V    + A   FG +DI+ +NAGI     G I +T   D  R  +VN  G FL
Sbjct: 478 DVTDEAAVQAAFEEAALAFGGVDIVVSNAGIA--ISGPIEETSDEDWRRSFDVNATGHFL 535

Query: 129 GAKHAARVMVPQQKG-CILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIR 187
            A+ A R+M  Q  G  I+F AS      G    AY  +K   L LV+ LA ELG  GIR
Sbjct: 536 VAREAVRIMKAQGLGGSIVFIASKNAVNPGPNFGAYGAAKAAELHLVRQLALELGPDGIR 595

Query: 188 VNCVSPYGLATGMSMKGGVDPALIESSMSQMG-------------N-LKGEFLKTDGIAN 233
           VN V+P  +  G  +  G     IE+  +  G             N LK E    D +A 
Sbjct: 596 VNGVNPDAVVRGSGIWTG---EWIEARAAAYGLSEEELEEFYRARNLLKREVTPED-VAE 651

Query: 234 AALYLASDESSYVSGQNLVVDGG 256
           A ++LAS   S  +G  + VDGG
Sbjct: 652 AVVFLASGLLSKTTGAIITVDGG 674

Length = 681

>gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional

 Score =  162 bits (413), Expect = 2e-49
 Identities = 88/253 (34%), Positives = 137/253 (54%), Gaps = 11/253 (4%)

Query: 11  KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGED---LADKLGQDVCYIH 67
               GKVA++TGGA+GIG      F   GAKVV+AD     GE+   L  + G +  ++ 
Sbjct: 3   MTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVA 62

Query: 68  CDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGF 127
           CD++ + EV  LV+  ++ +G+LD  +NNAGI +   G + +  +++ + ++ VN  G +
Sbjct: 63  CDVTRDAEVKALVEQTIAAYGRLDYAFNNAGI-EIEQGRLAEGSEAEFDAIMGVNVKGVW 121

Query: 128 LGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIR 187
           L  K+   +M+ Q  G I+ TAS     A      Y  SK+ ++GL K  A E  + GIR
Sbjct: 122 LCMKYQIPLMLAQGGGAIVNTASVAGLGAAPKMSIYAASKHAVIGLTKSAAIEYAKKGIR 181

Query: 188 VNCVSPYGLATGMSMKG-GVDPALIE--SSMSQMGNLKGEFLKTDGIANAALYLASDESS 244
           VN V P  + T M  +    DP   E  ++M  +G +     K + +A+A LYL SD +S
Sbjct: 182 VNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHPVGRIG----KVEEVASAVLYLCSDGAS 237

Query: 245 YVSGQNLVVDGGF 257
           + +G  L+VDGG 
Sbjct: 238 FTTGHALMVDGGA 250

Length = 253

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  162 bits (412), Expect = 3e-49
 Identities = 75/253 (29%), Positives = 121/253 (47%), Gaps = 10/253 (3%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADK----LGQDVCYIH 67
            L G+VA++TG A G+G          GA VV+    D+   +   +    LG+    + 
Sbjct: 3   SLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQ 62

Query: 68  CDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGF 127
            D++++  +   V  AV +FG++DI+ NNAGI +     + D    + + +I+VN  G F
Sbjct: 63  ADVTDKAALEAAVAAAVERFGRIDILVNNAGIFED--KPLADMSDDEWDEVIDVNLSGVF 120

Query: 128 LGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIR 187
              +     M  Q+ G I+  +S        G   Y  +K G++GL K LA EL +YGI 
Sbjct: 121 HLLRAVVPPMRKQRGGRIVNISSVAGLPGWPGRSNYAAAKAGLVGLTKALARELAEYGIT 180

Query: 188 VNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVS 247
           VN V+P  + T M      +    + + + +    G     + IA A  +L SD S Y++
Sbjct: 181 VNMVAPGDIDTDMKEATIEEAREAKDAETPL----GRSGTPEDIARAVAFLCSDASDYIT 236

Query: 248 GQNLVVDGGFSVV 260
           GQ + V GG  V+
Sbjct: 237 GQVIEVTGGVDVI 249

Length = 249

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score =  162 bits (412), Expect = 6e-49
 Identities = 89/260 (34%), Positives = 132/260 (50%), Gaps = 16/260 (6%)

Query: 10  FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADV-QDKLGEDLADKLGQDVCYIHC 68
            K L+G   ++TGGASGIG    E F E GA+V + DV +  L    A   G  V     
Sbjct: 6   LKPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVA 65

Query: 69  DISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFL 128
           D+++  +V  + DTAV +FG LD++ NNAGI   + G I +      E+ + VN  G F 
Sbjct: 66  DVADPAQVERVFDTAVERFGGLDVLVNNAGIAGPTGG-IDEITPEQWEQTLAVNLNGQFY 124

Query: 129 GAKHAARVMVPQQKG-CILFTASACTEI-AGLGSPAYTISKYGILGLVKCLAAELGQYGI 186
            A+ A  ++     G  I+  +S    +     +P Y  SK+ ++GLVK LA ELG  GI
Sbjct: 125 FARAAVPLLKASGHGGVIIALSSVAGRLGYPGRTP-YAASKWAVVGLVKSLAIELGPLGI 183

Query: 187 RVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKT---------DGIANAALY 237
           RVN + P G+  G  M+  V  A  +     +  ++ E+L+          + IA  AL+
Sbjct: 184 RVNAILP-GIVRGPRMR-RVIEARAQQLGIGLDEMEQEYLEKISLGRMVEPEDIAATALF 241

Query: 238 LASDESSYVSGQNLVVDGGF 257
           LAS  + Y++GQ + VDG  
Sbjct: 242 LASPAARYITGQAISVDGNV 261

Length = 264

>gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional

 Score =  161 bits (410), Expect = 7e-49
 Identities = 91/252 (36%), Positives = 135/252 (53%), Gaps = 8/252 (3%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL--GQDVCYIHCD 69
           RL G+VAI+TG  SGIG    +LF   GA+VV+AD   +  E +A  +  G        D
Sbjct: 2   RLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGD 61

Query: 70  ISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLG 129
           + + + V  LVD   +++G+LD++ NNAG      G+++ T ++D + ++ VN  G FL 
Sbjct: 62  VGSAEAVEALVDFVAARWGRLDVLVNNAGFG--CGGTVVTTDEADWDAVMRVNVGGVFLW 119

Query: 130 AKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVN 189
           AK+A  +M  Q  G I+ TAS      G G  AY  SK  I  L + +A +    GIRVN
Sbjct: 120 AKYAIPIMQRQGGGSIVNTASQLALAGGRGRAAYVASKGAIASLTRAMALDHATDGIRVN 179

Query: 190 CVSPYGLATGMSMKG---GVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYV 246
            V+P  + T    +      DP  +  ++     +   F   + +A AAL+LASDESS+ 
Sbjct: 180 AVAPGTIDTPYFRRIFARHADPEALREALRARHPM-NRFGTAEEVAQAALFLASDESSFA 238

Query: 247 SGQNLVVDGGFS 258
           +G  LVVDGG+ 
Sbjct: 239 TGTTLVVDGGWL 250

Length = 252

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score =  160 bits (406), Expect = 4e-48
 Identities = 93/264 (35%), Positives = 145/264 (54%), Gaps = 28/264 (10%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVI-ADVQDKLGEDLA--DKLGQDVCYIHC 68
            L GK A++TGG+ G+G    E   E GA+VV+ A   ++L E  A  + LG D  +I  
Sbjct: 9   DLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAA 68

Query: 69  DISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGS-ILDTPKSDLERLINVNTIGGF 127
           D+++E ++  L +  + +FG +DI+ NNAG    ++G+   D P    ++++N+N  G F
Sbjct: 69  DVADEADIERLAEETLERFGHVDILVNNAGA---TWGAPAEDHPVEAWDKVMNLNVRGLF 125

Query: 128 LGAKHAARV-MVPQQKGCILFTASACTEIAGL-GSP-------AYTISKYGILGLVKCLA 178
           L ++  A+  M+P+  G I+  AS    +AGL G+P       AY  SK  ++   + LA
Sbjct: 126 LLSQAVAKRSMIPRGYGRIINVAS----VAGLGGNPPEVMDTIAYNTSKGAVINFTRALA 181

Query: 179 AELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQ--MGNLKGEFLKTDGIANAAL 236
           AE G +GIRVN ++P    T M+   G    L E  ++   +G L  +    + +  AAL
Sbjct: 182 AEWGPHGIRVNAIAPGFFPTKMTR--GTLERLGEDLLAHTPLGRLGDD----EDLKGAAL 235

Query: 237 YLASDESSYVSGQNLVVDGGFSVV 260
            LASD S +++GQ L VDGG S V
Sbjct: 236 LLASDASKHITGQILAVDGGVSAV 259

Length = 259

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score =  166 bits (422), Expect = 4e-48
 Identities = 88/253 (34%), Positives = 139/253 (54%), Gaps = 10/253 (3%)

Query: 14  EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNE 73
           + +V ++TG A GIG  A + F   G +VV+AD   +   + AD LG D   +  D+S+E
Sbjct: 4   QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDE 63

Query: 74  DEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHA 133
            ++    +    +FG++D++ NNAG+ D +  + LDT   +  RL  +N  G +L A+ A
Sbjct: 64  AQIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREA 123

Query: 134 ARVMVPQQKGC-ILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVS 192
            R+M+ Q  G  I+  AS    +A     AY+ SK  ++ L + LA E    GIRVN V 
Sbjct: 124 LRLMIEQGHGAAIVNVASGAGLVALPKRTAYSASKAAVISLTRSLACEWAAKGIRVNAVL 183

Query: 193 PYGLATGMSMK----GGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSG 248
           P  + T M  +    G +DP+ + S +  +G L     + + IA A  +LASD++SY++G
Sbjct: 184 PGYVRTQMVAELERAGKLDPSAVRSRIP-LGRLG----RPEEIAEAVFFLASDQASYITG 238

Query: 249 QNLVVDGGFSVVN 261
             LVVDGG++V  
Sbjct: 239 STLVVDGGWTVYG 251

Length = 520

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score =  158 bits (403), Expect = 6e-48
 Identities = 84/250 (33%), Positives = 132/250 (52%), Gaps = 21/250 (8%)

Query: 16  KVAIITGGASGIGAMAVELFHENGAKVVIADV-QDKLGE--DLADKLGQDVCYIHCDISN 72
           KVA++TG + GIG          GAKV + D  ++   E  +    LG +   +  D+S+
Sbjct: 1   KVALVTGASRGIGRAIALRLAAEGAKVAVTDRSEEAAAETVEEIKALGGNAAALEADVSD 60

Query: 73  EDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKH 132
            + V  LV+   ++FG +DI+ NNAGI   +   ++   + D + +INVN  G F   + 
Sbjct: 61  REAVEALVEKVEAEFGPVDILVNNAGITRDNL--LMRMSEEDWDAVINVNLTGVFNVTQA 118

Query: 133 AARVMVPQQKGCILFTASACTEIAGL-GSPA---YTISKYGILGLVKCLAAELGQYGIRV 188
             R M+ ++ G I+  +S    + GL G+P    Y  SK G++G  K LA EL   GI V
Sbjct: 119 VIRAMIKRRSGRIINISS----VVGLIGNPGQANYAASKAGVIGFTKSLAKELASRGITV 174

Query: 189 NCVSPYGLATGMSMKGGVDPALIESSMSQ--MGNLKGEFLKTDGIANAALYLASDESSYV 246
           N V+P  + T M+    +   + E  + Q  +G L G     + +ANA  +LASD++SY+
Sbjct: 175 NAVAPGFIDTDMTDA--LPEKVKEKILKQIPLGRL-GT---PEEVANAVAFLASDDASYI 228

Query: 247 SGQNLVVDGG 256
           +GQ L V+GG
Sbjct: 229 TGQVLHVNGG 238

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score =  148 bits (376), Expect = 7e-44
 Identities = 88/252 (34%), Positives = 133/252 (52%), Gaps = 13/252 (5%)

Query: 15  GKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADK--LGQDVCYIHCDISN 72
           GKVA++TGGASGIG    +     GA VV+AD+  ++ E +A+    G     + CD+++
Sbjct: 1   GKVALVTGGASGIGLAIAKRLAAEGAAVVVADIDPEIAEKVAEAAQGGPRALGVQCDVTS 60

Query: 73  EDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKH 132
           E +V +  + AV +FG LDI+ +NAGI   +   I +T   D  R +++N  G FL ++ 
Sbjct: 61  EAQVQSAFEQAVLEFGGLDIVVSNAGIA--TSSPIAETSLEDWNRSMDINLTGHFLVSRE 118

Query: 133 AARVMVPQQKG-CILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCV 191
           A R+M  Q  G  I+F AS      G  + AY+ +K     L +CLA E G+ GIRVN V
Sbjct: 119 AFRIMKSQGIGGNIVFNASKNAVAPGPNAAAYSAAKAAEAHLARCLALEGGEDGIRVNTV 178

Query: 192 SPYGLATGMSMKGGVDPAL--IESSMSQ---MGN--LKGEFLKTDGIANAALYLASDESS 244
           +P  +  G  +  GV  A       + +        LK E L  D +A A + +AS++  
Sbjct: 179 NPDAVFRGSKIWEGVWRAARAKAYGLLEEEYRTRNLLKREVLPED-VAEAVVAMASEDFG 237

Query: 245 YVSGQNLVVDGG 256
             +G  + VDGG
Sbjct: 238 KTTGAIVTVDGG 249

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score =  148 bits (377), Expect = 7e-44
 Identities = 82/251 (32%), Positives = 119/251 (47%), Gaps = 14/251 (5%)

Query: 13  LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCD 69
           L GK A++TG A G+GA   E   E GA V   D       +LA  L   G     I  D
Sbjct: 5   LAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAAD 64

Query: 70  ISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLG 129
           +++   V    D A +  G LD + NNAGI +    S  +      + ++NVN  G FL 
Sbjct: 65  LADPASVQRFFDAAAAALGGLDGLVNNAGITNSK--SATELDIDTWDAVMNVNVRGTFLM 122

Query: 130 AKHAARVMVPQQKGCILFTASACTEIAGLGSP---AYTISKYGILGLVKCLAAELGQYGI 186
            + A   +    +G I+  AS   + A  G+P   AY  SK  ++G+ + LA ELG  GI
Sbjct: 123 LRAALPHLRDSGRGRIVNLAS---DTALWGAPKLGAYVASKGAVIGMTRSLARELGGRGI 179

Query: 187 RVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYV 246
            VN ++P   AT  +     D     +   +   L+   +  D +A A L+L SD + +V
Sbjct: 180 TVNAIAPGLTATEATAYVPADERH--AYYLKGRALERLQVPDD-VAGAVLFLLSDAARFV 236

Query: 247 SGQNLVVDGGF 257
           +GQ L V+GGF
Sbjct: 237 TGQLLPVNGGF 247

Length = 250

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score =  148 bits (376), Expect = 1e-43
 Identities = 91/254 (35%), Positives = 132/254 (51%), Gaps = 13/254 (5%)

Query: 10  FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLG-EDLAD---KLGQDVCY 65
           +  LEGKV +ITGG++G+G      F +  AKVVI    D+    D+A+   K G +   
Sbjct: 2   YSDLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIA 61

Query: 66  IHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIG 125
           +  D++ E +V+NL+ TAV +FG LD+M NNAGI +       +    D  ++IN N  G
Sbjct: 62  VKGDVTVESDVVNLIQTAVKEFGTLDVMINNAGIENAV--PSHEMSLEDWNKVINTNLTG 119

Query: 126 GFLGAKHAARVMVPQ-QKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQY 184
            FLG++ A +  V    KG I+  +S   +I       Y  SK G+  + + LA E    
Sbjct: 120 AFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWPLFVHYAASKGGVKLMTETLAMEYAPK 179

Query: 185 GIRVNCVSPYGLATGMSMKGGVDPALIES--SMSQMGNLKGEFLKTDGIANAALYLASDE 242
           GIRVN + P  + T ++ +   DP       SM  MG +     K + IA  A +LAS E
Sbjct: 180 GIRVNNIGPGAINTPINAEKFADPKQRADVESMIPMGYIG----KPEEIAAVAAWLASSE 235

Query: 243 SSYVSGQNLVVDGG 256
           +SYV+G  L  DGG
Sbjct: 236 ASYVTGITLFADGG 249

Length = 261

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score =  148 bits (375), Expect = 1e-43
 Identities = 81/247 (32%), Positives = 132/247 (53%), Gaps = 4/247 (1%)

Query: 13  LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISN 72
           LEGKVAI+TG  +GIGA         GA+VV+AD+     + +  ++      +  D+++
Sbjct: 1   LEGKVAIVTGAGAGIGAACAARLAREGARVVVADIDGGAAQAVVAQIAGGALALRVDVTD 60

Query: 73  EDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKH 132
           E +V  L + AV +FG LD++ NNAG +  +  +I+DT  +  ++ + +N  G FL  +H
Sbjct: 61  EQQVAALFERAVEEFGGLDLLVNNAGAMHLT-PAIIDTDLAVWDQTMAINLRGTFLCCRH 119

Query: 133 AARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVS 192
           AA  M+ +  G I+  +S   +    G  AY  SK  I  L + LAAEL   GIR N ++
Sbjct: 120 AAPRMIARGGGSIVNLSSIAGQSGDPGYGAYGASKAAIRNLTRTLAAELRHAGIRCNALA 179

Query: 193 PYGLATGM---SMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQ 249
           P  + T +    + G             +  L+G   + + +A A ++L SD++S+++GQ
Sbjct: 180 PGLIDTPLLLAKLAGFEGALGPGGFHLLIHQLQGRLGRPEDVAAAVVFLLSDDASFITGQ 239

Query: 250 NLVVDGG 256
            L VDGG
Sbjct: 240 VLCVDGG 246

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score =  147 bits (374), Expect = 2e-43
 Identities = 81/256 (31%), Positives = 124/256 (48%), Gaps = 18/256 (7%)

Query: 15  GKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLG----EDLADKLGQDVCYIHCDI 70
            KVAIITG A GIG    E    +G  +V+AD+  +           + G +   +  D+
Sbjct: 2   SKVAIITGAAQGIGRAIAERLAADGFNIVLADLNLEEAAKSTIQEISEAGYNAVAVGADV 61

Query: 71  SNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGA 130
           +++D+V  L+D AV KFG  D+M NNAGI       +L   + DL+++  VN  G   G 
Sbjct: 62  TDKDDVEALIDQAVEKFGSFDVMVNNAGIA--PITPLLTITEEDLKKVYAVNVFGVLFGI 119

Query: 131 KHAARVMVPQQKGCILFTASACTEIAGL-GSPAYTISKYGILGLVKCLAAELGQYGIRVN 189
           + AAR       G  +  AS+   + G     AY+ SK+ + GL +  A EL   GI VN
Sbjct: 120 QAAARQFKKLGHGGKIINASSIAGVQGFPNLGAYSASKFAVRGLTQTAAQELAPKGITVN 179

Query: 190 CVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKT---------DGIANAALYLAS 240
             +P  + T   M   +D  + E +    G    EF  +         + +A    +LAS
Sbjct: 180 AYAPGIVKTE--MWDYIDEEVGEIAGKPEGEGFAEFSSSIPLGRLSEPEDVAGLVSFLAS 237

Query: 241 DESSYVSGQNLVVDGG 256
           ++S Y++GQ ++VDGG
Sbjct: 238 EDSDYITGQTILVDGG 253

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score =  147 bits (373), Expect = 2e-43
 Identities = 91/263 (34%), Positives = 127/263 (48%), Gaps = 36/263 (13%)

Query: 13  LEGKVAIITGGASGIG-AMAVELFHENGAKVVIA----DVQDKLGEDLADKLGQDVCYIH 67
           L+GKVA ITGG +GIG A+A       GA V IA    +V +   E+++   G     I 
Sbjct: 1   LKGKVAFITGGGTGIGKAIAKAFAEL-GASVAIAGRKPEVLEAAAEEISSATGGRAHPIQ 59

Query: 68  CDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERL--------I 119
           CD+ + + V   VD  + +FGK+DI+ NNA       G+ L    +  E L        I
Sbjct: 60  CDVRDPEAVEAAVDETLKEFGKIDILINNAA------GNFL----APAESLSPNGFKTVI 109

Query: 120 NVNTIGGFLGAKHAA-RVMVPQQKGCILFTASACTEIAGLGSPAYTIS---KYGILGLVK 175
           +++  G F   K    R++  +  G IL  ++     A  GSP    S   K G+  L +
Sbjct: 110 DIDLNGTFNTTKAVGKRLIEAKHGGSILNISAT---YAYTGSPFQVHSAAAKAGVDALTR 166

Query: 176 CLAAELGQYGIRVNCVSPYGLAT--GMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIAN 233
            LA E G YGIRVN ++P  + T  GM           E  M +   L G     + IAN
Sbjct: 167 SLAVEWGPYGIRVNAIAPGPIPTTEGMERLAP--SGKSEKKMIERVPL-GRLGTPEEIAN 223

Query: 234 AALYLASDESSYVSGQNLVVDGG 256
            AL+L SD +SY++G  LVVDGG
Sbjct: 224 LALFLLSDAASYINGTTLVVDGG 246

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score =  146 bits (371), Expect = 4e-43
 Identities = 80/251 (31%), Positives = 129/251 (51%), Gaps = 26/251 (10%)

Query: 18  AIITGGASGIGAMAVELFHENGAKVVIADV-QDKLGEDLADKL---GQDVCYIHCDISNE 73
           A++TG + GIG        + GAKV+I     ++  E++ ++L   G     + CD+S+ 
Sbjct: 1   ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDR 60

Query: 74  DEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHA 133
           ++V  +V+    + G +DI+ NNAGI   +   ++   + D + +I+ N  G F   +  
Sbjct: 61  EDVKAVVEEIEEELGPIDILVNNAGITRDNL--LMRMKEEDWDAVIDTNLTGVFNLTQAV 118

Query: 134 ARVMVPQQKGCILFTASACTEIAGL-GSPA---YTISKYGILGLVKCLAAELGQYGIRVN 189
            R+M+ Q+ G I+  +S    + GL G+     Y  SK G++G  K LA EL    I VN
Sbjct: 119 LRIMIKQRSGRIINISS----VVGLMGNAGQANYAASKAGVIGFTKSLAKELASRNITVN 174

Query: 190 CVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDG----IANAALYLASDESSY 245
            V+P  + T M+ K      L E    ++  L    L   G    +ANA  +LASDE+SY
Sbjct: 175 AVAPGFIDTDMTDK------LSEKVKKKI--LSQIPLGRFGTPEEVANAVAFLASDEASY 226

Query: 246 VSGQNLVVDGG 256
           ++GQ + VDGG
Sbjct: 227 ITGQVIHVDGG 237

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score =  146 bits (370), Expect = 5e-43
 Identities = 77/252 (30%), Positives = 121/252 (48%), Gaps = 17/252 (6%)

Query: 13  LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL-------GQDVCY 65
           L GKVA++TG + GIG    +    +GA VV+     K     A+++       G     
Sbjct: 1   LAGKVALVTGASRGIGRAIAKRLARDGASVVVNYASSK---AAAEEVVAEIEAAGGKAIA 57

Query: 66  IHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIG 125
           +  D+S+  +V  L D A   FG +DI+ NNAG++      I +T + + +R+  VNT G
Sbjct: 58  VQADVSDPSQVARLFDAAEKAFGGVDILVNNAGVML--KKPIAETSEEEFDRMFTVNTKG 115

Query: 126 GFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYG 185
            F   + AA+ +     G I+  +S+ T        AY  SK  +    + LA ELG  G
Sbjct: 116 AFFVLQEAAKRLRD--GGRIINISSSLTAAYTPNYGAYAGSKAAVEAFTRVLAKELGGRG 173

Query: 186 IRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSY 245
           I VN V+P  + T M   G  + A      ++M  L G   + + IA    +LAS +  +
Sbjct: 174 ITVNAVAPGPVDTDMFYAGKTEEA--VEGYAKMSPL-GRLGEPEDIAPVVAFLASPDGRW 230

Query: 246 VSGQNLVVDGGF 257
           V+GQ +  +GG+
Sbjct: 231 VNGQVIRANGGY 242

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional

 Score =  145 bits (369), Expect = 1e-42
 Identities = 83/253 (32%), Positives = 128/253 (50%), Gaps = 13/253 (5%)

Query: 16  KVAIITGGASGIG-AMAVELFHENGAKVVIADVQDKLG----EDLADKLGQDVCYIHCDI 70
           +VAI+T   SGIG A A+ L  + G  + I    D+ G     +     G        D+
Sbjct: 3   QVAIVTASDSGIGKACALLL-AQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDL 61

Query: 71  SNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGA 130
           S+  E    +D  + + G++D++ NNAG + ++    LD    +  ++  V+  G FL +
Sbjct: 62  SDLPEGAQALDKLIQRLGRIDVLVNNAGAMTKA--PFLDMDFDEWRKIFTVDVDGAFLCS 119

Query: 131 KHAARVMVPQ-QKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVN 189
           + AAR MV Q Q G I+   S        G+ AYT +K+ + GL K +A EL ++GI VN
Sbjct: 120 QIAARHMVKQGQGGRIINITSVHEHTPLPGASAYTAAKHALGGLTKAMALELVEHGILVN 179

Query: 190 CVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQ 249
            V+P  +AT M+     D        S+ G   G    T  IA+   +L S+ +SY +GQ
Sbjct: 180 AVAPGAIATPMNGMDDSDVK----PDSRPGIPLGRPGDTHEIASLVAWLCSEGASYTTGQ 235

Query: 250 NLVVDGGFSVVNP 262
           +L+VDGGF + NP
Sbjct: 236 SLIVDGGFMLANP 248

Length = 256

>gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family

 Score =  142 bits (359), Expect = 4e-41
 Identities = 89/266 (33%), Positives = 134/266 (50%), Gaps = 25/266 (9%)

Query: 13  LEGKVAIITGGASGIG-AMAVELFHENGAKVVIADVQDKLG----------EDLA----- 56
           LEGKVA ITG A G G A AV L  E GA ++  D+   L           EDL      
Sbjct: 1   LEGKVAFITGAARGQGRAHAVRLAAE-GADIIAIDLCAPLSDYPTYPLATREDLDETARL 59

Query: 57  -DKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDL 115
            + LG+ V     D+ +  EV  +V+  V +FG+LD++  NAG+L  S+G   +  +   
Sbjct: 60  VEALGRKVLARKADVRDLAEVRAVVEDGVEQFGRLDVVVANAGVL--SYGRSWELSEEQW 117

Query: 116 ERLINVNTIGGFLGAKHAARVMVPQ-QKGCILFTASACTEIAGLGSPAYTISKYGILGLV 174
           + ++++N  G +   K     M+ +   G I+ T+S     A  G   Y  +K+G++GL 
Sbjct: 118 DTVLDINLTGVWRTCKAVVPHMIERGNGGSIIITSSVAGLKALPGLAHYAAAKHGLVGLT 177

Query: 175 KCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMS----QMGNLKGEFLKTDG 230
           K LA EL +YGIRVN + PY + T M     +  A ++   +            F+  + 
Sbjct: 178 KTLANELAEYGIRVNSIHPYSVDTPMIAPEAMREAFLKYPEAARAFMPALPVSGFVPPED 237

Query: 231 IANAALYLASDESSYVSGQNLVVDGG 256
           +A+A L+LASDES Y++G  L VD G
Sbjct: 238 VADAVLWLASDESRYITGHQLPVDAG 263

Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265

>gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional

 Score =  141 bits (358), Expect = 5e-41
 Identities = 81/255 (31%), Positives = 124/255 (48%), Gaps = 8/255 (3%)

Query: 10  FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCD 69
              L GKVAI+TGGA+ IGA         GA+V I D+    G  +A  LG+   +I  D
Sbjct: 1   MIGLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATD 60

Query: 70  ISNEDEVINLVDTAVSKFGKLDIMYNNAGI-LDRSFGSILDTPKSDLERLINVNTIGGFL 128
           I+++  +   V T V++FG++DI+ N A   LD    S     ++D    ++VN +   +
Sbjct: 61  ITDDAAIERAVATVVARFGRVDILVNLACTYLDDGLAS----SRADWLAALDVNLVSAAM 116

Query: 129 GAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRV 188
            A+ A   +     G I+   S   + A  G   Y  SK  I  L + +A +L   GIRV
Sbjct: 117 LAQAAHPHLARGG-GAIVNFTSISAKFAQTGRWLYPASKAAIRQLTRSMAMDLAPDGIRV 175

Query: 189 NCVSP-YGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVS 247
           N VSP +  +  M    G D A  +   +   +L G     + +A    +L SD +S+V+
Sbjct: 176 NSVSPGWTWSRVMDELSGGDRAKADRVAAPF-HLLGRVGDPEEVAQVVAFLCSDAASFVT 234

Query: 248 GQNLVVDGGFSVVNP 262
           G +  VDGG+S + P
Sbjct: 235 GADYAVDGGYSALGP 249

Length = 261

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score =  141 bits (358), Expect = 5e-41
 Identities = 84/253 (33%), Positives = 129/253 (50%), Gaps = 11/253 (4%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHC 68
           +L GK A+ITG   GIG     +F  +GA +++ D+  ++ E LAD+L   G     +  
Sbjct: 3   KLTGKTALITGALQGIGEGIARVFARHGANLILLDISPEI-EKLADELCGRGHRCTAVVA 61

Query: 69  DISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFL 128
           D+ +   V   +  A  K G++DI+ NNAG+     GS LD    D +  I++N  G + 
Sbjct: 62  DVRDPASVAAAIKRAKEKEGRIDILVNNAGVC--RLGSFLDMSDEDRDFHIDINIKGVWN 119

Query: 129 GAKHAARVMVPQQKGCILFTASACTEI-AGLGSPAYTISKYGILGLVKCLAAELGQYGIR 187
             K     M+ ++ G I+  +S   ++ A  G  AY ++K  I+GL K LA E  Q GIR
Sbjct: 120 VTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSLAVEYAQSGIR 179

Query: 188 VNCVSPYGLATGM--SMKGGVDPALIESSMSQM--GNLKGEFLKTDGIANAALYLASDES 243
           VN + P  + T M  S+    +P   ES +++M              +   A +LASDES
Sbjct: 180 VNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPLRRLADPLEVGELAAFLASDES 239

Query: 244 SYVSGQNLVVDGG 256
           SY++G   V+DGG
Sbjct: 240 SYLTGTQNVIDGG 252

Length = 263

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score =  141 bits (357), Expect = 9e-41
 Identities = 82/258 (31%), Positives = 136/258 (52%), Gaps = 20/258 (7%)

Query: 11  KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGE--DLADKLGQDVCYIHC 68
           KRLE KVA+ITG ++GIG  +     + GA V+  D+ + + E  D     G      H 
Sbjct: 2   KRLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIAEAVSETVDKIKSNGGKAKAYHV 61

Query: 69  DISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFL 128
           DIS+E +V +       +FG++D+++NNAG+ D + G I + P    ++++ V+  G FL
Sbjct: 62  DISDEQQVKDFASEIKEQFGRVDVLFNNAGV-DNAAGRIHEYPVDVFDKIMAVDMRGTFL 120

Query: 129 GAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRV 188
             K    +M+ +Q G I+ T+S   + A L    Y  +K  ++   K +A E G+ GIR 
Sbjct: 121 MTKMLLPLMM-EQGGSIINTSSFSGQAADLYRSGYNAAKGAVINFTKSIAIEYGRDGIRA 179

Query: 189 NCVSPYGLATGMSMKGGVDPALIESSMSQMG-----NLK-----GEFLKTDGIANAALYL 238
           N ++P  + T +     VD  L  +S  + G     N K     G   K + +A   ++L
Sbjct: 180 NAIAPGTIETPL-----VD-KLTGTSEDEAGKTFRENQKWMTPLGRLGKPEEVAKLVVFL 233

Query: 239 ASDESSYVSGQNLVVDGG 256
           ASD+SS+++G+ + +DGG
Sbjct: 234 ASDDSSFITGETIRIDGG 251

Length = 272

>gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

 Score =  141 bits (357), Expect = 9e-41
 Identities = 87/262 (33%), Positives = 123/262 (46%), Gaps = 19/262 (7%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDIS 71
            L G+VA+ITGG SGIG   VE F   GA+V + +   +    L  + G  V  +  D++
Sbjct: 3   WLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVT 62

Query: 72  NEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLE----RLINVNTIGGF 127
           +  +    VD  V  FGKLD    NAGI D    S++D P   L+     + NVN  G  
Sbjct: 63  SYADNQRAVDQTVDAFGKLDCFVGNAGIWDY-NTSLVDIPAETLDTAFDEIFNVNVKGYL 121

Query: 128 LGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIR 187
           LGAK A   +     G ++FT S  +   G G P YT SK+ ++GLV+ LA EL    IR
Sbjct: 122 LGAKAALPALK-ASGGSMIFTLSNSSFYPGGGGPLYTASKHAVVGLVRQLAYELAPK-IR 179

Query: 188 VNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLK---------GEFLKTDGIANAALYL 238
           VN V+P G  T   ++G       E+S+S    L              + +      + L
Sbjct: 180 VNGVAPGGTVT--DLRGPASLGQGETSISDSPGLADMIAAITPLQFAPQPEDHTGPYVLL 237

Query: 239 ASDE-SSYVSGQNLVVDGGFSV 259
           AS   S  ++G  +  DGG  +
Sbjct: 238 ASRRNSRALTGVVINADGGLGI 259

Length = 263

>gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11

 Score =  141 bits (356), Expect = 9e-41
 Identities = 81/259 (31%), Positives = 128/259 (49%), Gaps = 17/259 (6%)

Query: 13  LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL------GQDVCYI 66
           L GKVAIITG +SGIGA    LF   GA++ +     +  E+            + +  +
Sbjct: 1   LSGKVAIITGSSSGIGAGTAILFARLGARLALTGRDAERLEETRQSCLQAGVSEKKILLV 60

Query: 67  HCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGG 126
             D++ E+    ++ T ++KFG+LDI+ NNAGIL +  G   D    + ++++N+N    
Sbjct: 61  VADLTEEEGQDRIISTTLAKFGRLDILVNNAGILAK--GGGEDQDIEEYDKVMNLN---- 114

Query: 127 FLGAKHAARVMVP---QQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQ 183
                +  ++ VP   + KG I+  +S     +  G   Y ISK  +    +C A EL  
Sbjct: 115 LRAVIYLTKLAVPHLIKTKGEIVNVSSVAGGRSFPGVLYYCISKAALDQFTRCTALELAP 174

Query: 184 YGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLK--GEFLKTDGIANAALYLASD 241
            G+RVN VSP  + TG   + G+        +S+       G     D +A A  +LASD
Sbjct: 175 KGVRVNSVSPGVIVTGFHRRMGMPEEQYIKFLSRAKETHPLGRPGTVDEVAEAIAFLASD 234

Query: 242 ESSYVSGQNLVVDGGFSVV 260
            SS+++GQ L VDGG  ++
Sbjct: 235 ASSFITGQLLPVDGGRHLM 253

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score =  140 bits (356), Expect = 1e-40
 Identities = 88/268 (32%), Positives = 132/268 (49%), Gaps = 37/268 (13%)

Query: 15  GKVAIITGGASGIG-AMAVELFHENGAKVVIADVQD----KLGEDLADKLGQDVCYIHCD 69
           GK A++TG ASGIG A+A       GA VV+ D  +       +   D  G  V Y+  D
Sbjct: 1   GKTALVTGAASGIGLAIARA-LAAAGANVVVNDFGEEGAEAAAKVAGD-AGGSVIYLPAD 58

Query: 70  ISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLG 129
           ++ EDE+ +++  A ++FG LDI+ NNAGI  +    I + P  D +R+I V     F  
Sbjct: 59  VTKEDEIADMIAAAAAEFGGLDILVNNAGI--QHVAPIEEFPPEDWDRIIAVMLTSAFHT 116

Query: 130 AKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVN 189
            + A   M  Q  G I+  ASA   +A     AY  +K+G++GL K LA E+ ++GI VN
Sbjct: 117 IRAALPHMKKQGWGRIINIASAHGLVASPFKSAYVAAKHGLIGLTKVLALEVAEHGITVN 176

Query: 190 CVSPYGLATGMSMKGGVDPALIESSMSQM------------------GNLKGEFLKTDGI 231
            + P          G V   L+E  ++                    G     F+  D +
Sbjct: 177 AICP----------GYVRTPLVEKQIADQAKTRGIPEEQVIREVMLKGQPTKRFVTVDEV 226

Query: 232 ANAALYLASDESSYVSGQNLVVDGGFSV 259
           A  ALYLASD ++ ++GQ +V+DGG++ 
Sbjct: 227 AETALYLASDAAAQITGQAIVLDGGWTA 254

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score =  141 bits (356), Expect = 1e-40
 Identities = 82/252 (32%), Positives = 133/252 (52%), Gaps = 6/252 (2%)

Query: 10  FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGE--DLADKLGQDVCYIH 67
           F  L+GKVAI+TGG +G+G        + GA ++I        E   L +K G+ V ++ 
Sbjct: 10  FFSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGTNWDETRRLIEKEGRKVTFVQ 69

Query: 68  CDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGF 127
            D++  +    +V  A+ +FGK+DI+ NNAG + R+   +L+    D   ++++N    +
Sbjct: 70  VDLTKPESAEKVVKEALEEFGKIDILVNNAGTIRRA--PLLEYKDEDWNAVMDINLNSVY 127

Query: 128 LGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIR 187
             ++  A+VM  Q  G I+  AS  +   G   PAYT SK+G+ GL K  A EL  Y I+
Sbjct: 128 HLSQAVAKVMAKQGSGKIINIASMLSFQGGKFVPAYTASKHGVAGLTKAFANELAAYNIQ 187

Query: 188 VNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVS 247
           VN ++P  + T  +     D    +  + ++    G + + D +  AA++LAS  S YV+
Sbjct: 188 VNAIAPGYIKTANTAPIRADKNRNDEILKRIP--AGRWGEPDDLMGAAVFLASRASDYVN 245

Query: 248 GQNLVVDGGFSV 259
           G  L VDGG+ V
Sbjct: 246 GHILAVDGGWLV 257

Length = 258

>gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional

 Score =  140 bits (355), Expect = 2e-40
 Identities = 70/262 (26%), Positives = 126/262 (48%), Gaps = 26/262 (9%)

Query: 14  EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQ----DKLGEDLADKLGQDVCY-IHC 68
             +VA++ GG   +GA       E G +V +AD+       + +++  + G+ + Y    
Sbjct: 1   MNQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGA 60

Query: 69  DISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFL 128
           D ++E  V+ L       FG++D++  NAGI   +F  I D    D +R + VN +G FL
Sbjct: 61  DATSEQSVLALSRGVDEIFGRVDLLVYNAGIAKAAF--ITDFQLGDFDRSLQVNLVGYFL 118

Query: 129 GAKHAARVMVPQQ-KGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIR 187
            A+  +R+M+    +G I+   S   ++    +  Y+ +K+G +GL + LA +L +YGI 
Sbjct: 119 CAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDLAEYGIT 178

Query: 188 VNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEF---------LKT----DGIANA 234
           V+ +       G  +K  +  +L+     ++G    E          LK       + N 
Sbjct: 179 VHSLML-----GNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQDVLNM 233

Query: 235 ALYLASDESSYVSGQNLVVDGG 256
            L+ AS ++SY +GQ++ V GG
Sbjct: 234 LLFYASPKASYCTGQSINVTGG 255

Length = 259

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score =  139 bits (351), Expect = 6e-40
 Identities = 83/257 (32%), Positives = 123/257 (47%), Gaps = 16/257 (6%)

Query: 11  KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDI 70
            RL+GKVA++TG ASGIG    E +   GA+VVIAD++       A ++G     +  D+
Sbjct: 2   MRLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDV 61

Query: 71  SNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGA 130
           + +D +  +V  AV +FG +DI++NNA + D +   ILD  +   +RL  VN  G F   
Sbjct: 62  TRQDSIDRIVAAAVERFGGIDILFNNAALFDMA--PILDISRDSYDRLFAVNVKGLFFLM 119

Query: 131 KHAARVMVPQQKG--CILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRV 188
           +  AR MV Q +G   I   + A      L S  Y  +K  ++   +  A  L ++GI V
Sbjct: 120 QAVARHMVEQGRGGKIINMASQAGRRGEALVS-HYCATKAAVISYTQSAALALIRHGINV 178

Query: 189 NCVSPYGLATGMSMKGGVDPALIESSMSQMGNLK---------GEFLKTDGIANAALYLA 239
           N ++P G+     M   VD           G  K         G     D +   AL+LA
Sbjct: 179 NAIAP-GVVDT-PMWDQVDALFARYENRPPGEKKRLVGEAVPLGRMGVPDDLTGMALFLA 236

Query: 240 SDESSYVSGQNLVVDGG 256
           S ++ Y+  Q   VDGG
Sbjct: 237 SADADYIVAQTYNVDGG 253

Length = 257

>gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs

 Score =  138 bits (348), Expect = 8e-40
 Identities = 78/245 (31%), Positives = 128/245 (52%), Gaps = 7/245 (2%)

Query: 15  GKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNED 74
           GKVAI+TGG  GIG      F E G KVV AD+ ++ G D A+  G ++ ++H D+++E 
Sbjct: 1   GKVAIVTGGGHGIGKQICLDFLEAGDKVVFADIDEERGADFAEAEGPNLFFVHGDVADET 60

Query: 75  EVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAA 134
            V  +V   + K G++D++ NNA     S G +      + +R+++VN  G +  +++  
Sbjct: 61  LVKFVVYAMLEKLGRIDVLVNNAARG--SKGILSSLLLEEWDRILSVNLTGPYELSRYCR 118

Query: 135 RVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPY 194
             ++ + KG I+  AS     +   S AY  SK G++ L   LA  LG   IRVNC+SP 
Sbjct: 119 DELI-KNKGRIINIASTRAFQSEPDSEAYAASKGGLVALTHALAMSLGPD-IRVNCISPG 176

Query: 195 GLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVD 254
            + T    +    P L +   +Q  +  G       IAN  L+L   ++ +++G+  +VD
Sbjct: 177 WINTTEQQEFTAAP-LTQEDHAQ--HPAGRVGTPKDIANLVLFLCQQDAGFITGETFIVD 233

Query: 255 GGFSV 259
           GG + 
Sbjct: 234 GGMTK 238

This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score =  138 bits (349), Expect = 2e-39
 Identities = 83/273 (30%), Positives = 132/273 (48%), Gaps = 42/273 (15%)

Query: 13  LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISN 72
           L+GK+ I+TGG+SGIG   V+    NGA VV AD+         D   ++  ++  D+S+
Sbjct: 7   LQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHG------GDGQHENYQFVPTDVSS 60

Query: 73  EDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPK----------SDLERLINVN 122
            +EV + V   + KFG++D + NNAGI   +   +L   K          +  +++ N+N
Sbjct: 61  AEEVNHTVAEIIEKFGRIDGLVNNAGI---NIPRLLVDEKDPAGKYELNEAAFDKMFNIN 117

Query: 123 TIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGL----GSPAYTISKYGILGLVKCLA 178
             G FL ++  AR MV Q  G I+  +S     AGL    G   Y  +K  +    +  A
Sbjct: 118 QKGVFLMSQAVARQMVKQHDGVIVNMSSE----AGLEGSEGQSCYAATKAALNSFTRSWA 173

Query: 179 AELGQYGIRVNCVSPYGL--ATGMSMKGGVDPALIESSMSQMGNLKGEFLKT-------- 228
            ELG++ IRV  V+P G+  ATG+      + AL  +    +  L+  + KT        
Sbjct: 174 KELGKHNIRVVGVAP-GILEATGLRTPEYEE-ALAYTRGITVEQLRAGYTKTSTIPLGRS 231

Query: 229 ---DGIANAALYLASDESSYVSGQNLVVDGGFS 258
                +A+   YL SD +SY++G    + GG +
Sbjct: 232 GKLSEVADLVCYLLSDRASYITGVTTNIAGGKT 264

Length = 266

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  136 bits (345), Expect = 4e-39
 Identities = 93/260 (35%), Positives = 132/260 (50%), Gaps = 32/260 (12%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQD-VCYIHCDI 70
           R +GKVA+ITGG  GIG    E F   GAKV +        E+ A +L +  V  I CD+
Sbjct: 4   RFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSA---ENEAKELREKGVFTIKCDV 60

Query: 71  SNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGA 130
            N D+V    +    +FG++D++ NNAGI+        D  K    ++I +N  G     
Sbjct: 61  GNRDQVKKSKEVVEKEFGRVDVLVNNAGIMYLMPFEEFDEEK--YNKMIKINLNGAIYTT 118

Query: 131 KHAARVMVPQQKGCILFTASACTEIAGLGSPA-----YTISKYGILGLVKCLAAELGQYG 185
                ++   + G I+  AS     AG+G+ A     Y I+K GI+ L + LA ELG+YG
Sbjct: 119 YEFLPLLKLSKNGAIVNIASN----AGIGTAAEGTTFYAITKAGIIILTRRLAFELGKYG 174

Query: 186 IRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEF-----LKTDG----IANAAL 236
           IRVN V+P  + T M++  G      E        L+  F     LKT G    IAN  L
Sbjct: 175 IRVNAVAPGWVETDMTL-SGKSQEEAE-------KLRELFRNKTVLKTTGKPEDIANIVL 226

Query: 237 YLASDESSYVSGQNLVVDGG 256
           +LASD++ Y++GQ +V DGG
Sbjct: 227 FLASDDARYITGQVIVADGG 246

Length = 255

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score =  136 bits (344), Expect = 5e-39
 Identities = 78/248 (31%), Positives = 115/248 (46%), Gaps = 11/248 (4%)

Query: 18  AIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHC---DISNED 74
            ++TG A GIG        E GA+V   D   +   +L   L +          D+++  
Sbjct: 1   VLVTGAAQGIGYAVARALAEAGARVAAVDRNFEQLLELVADLRRYGYPFATYKLDVADSA 60

Query: 75  EVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAA 134
            V  +V     ++G +D++ N AGIL    G+I      D +    VNT G F  ++  +
Sbjct: 61  AVDEVVQRLEREYGPIDVLVNVAGIL--RLGAIDSLSDEDWQATFAVNTFGVFNVSQAVS 118

Query: 135 RVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPY 194
             M  ++ G I+   S    +  +G  AY  SK  +  L KCL  EL  YGIR N VSP 
Sbjct: 119 PRMKRRRSGAIVTVGSNAANVPRMGMAAYAASKAALTMLTKCLGLELAPYGIRCNVVSPG 178

Query: 195 GLATGMSMKGGVDPA----LIESSMSQ--MGNLKGEFLKTDGIANAALYLASDESSYVSG 248
              T M  +   D      +I  S  Q  +G   G+  +   IANA L+LASD +S+++ 
Sbjct: 179 STDTEMQRQLWNDEYGEQQVIAGSPEQFRLGIPLGKIAEPSDIANAVLFLASDLASHITM 238

Query: 249 QNLVVDGG 256
            +LVVDGG
Sbjct: 239 HDLVVDGG 246

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score =  135 bits (343), Expect = 6e-39
 Identities = 79/262 (30%), Positives = 127/262 (48%), Gaps = 31/262 (11%)

Query: 14  EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQD----VCYIHCD 69
           E K+ +ITG A  IG    +     GA++++AD+     E L ++L       V  +  D
Sbjct: 1   EDKIILITGAAGLIGKAFCKALLSAGARLILADINAPALEQLKEELTNLYKNRVIALELD 60

Query: 70  ISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSIL-DTPKSDLERLINVNTIGGFL 128
           I++++ +  L+++ + KFG++DI+ NNA    + +GS   + P      ++NVN  G FL
Sbjct: 61  ITSKESIKELIESYLEKFGRIDILINNAYPSPKVWGSRFEEFPYEQWNEVLNVNLGGAFL 120

Query: 129 GAKHAARVMVPQQKGCILFTASACTEIAGLGSP--------------AYTISKYGILGLV 174
            ++   ++   Q KG I+  AS    I G+ +P               Y++ K GI+ L 
Sbjct: 121 CSQAFIKLFKKQGKGSIINIAS----IYGVIAPDFRIYENTQMYSPVEYSVIKAGIIHLT 176

Query: 175 KCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANA 234
           K LA      GIRVN +SP G+              +E    +        L  + +  A
Sbjct: 177 KYLAKYYADTGIRVNAISPGGILNNQ------PSEFLEKYTKKCPL--KRMLNPEDLRGA 228

Query: 235 ALYLASDESSYVSGQNLVVDGG 256
            ++L SD SSYV+GQNLV+DGG
Sbjct: 229 IIFLLSDASSYVTGQNLVIDGG 250

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  135 bits (342), Expect = 6e-39
 Identities = 67/247 (27%), Positives = 116/247 (46%), Gaps = 15/247 (6%)

Query: 13  LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISN 72
              K  +ITG ASGIG      F   GA+V   D QDK        L  +  ++  D+S+
Sbjct: 3   FMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDK------PDLSGNFHFLQLDLSD 56

Query: 73  EDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKH 132
           +      ++        +DI+ N AGILD  +  +LDT   + + + + N    FL  + 
Sbjct: 57  D------LEPLFDWVPSVDILCNTAGILD-DYKPLLDTSLEEWQHIFDTNLTSTFLLTRA 109

Query: 133 AARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVS 192
               M+ ++ G I+   S  + +AG G  AYT SK+ + G  K LA +  + GI+V  ++
Sbjct: 110 YLPQMLERKSGIIINMCSIASFVAGGGGAAYTASKHALAGFTKQLALDYAKDGIQVFGIA 169

Query: 193 PYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLV 252
           P  + T M+        L +    +       + + + +A   L+LAS ++ Y+ G  + 
Sbjct: 170 PGAVKTPMTAADFEPGGLADWVARETP--IKRWAEPEEVAELTLFLASGKADYMQGTIVP 227

Query: 253 VDGGFSV 259
           +DGG+++
Sbjct: 228 IDGGWTL 234

Length = 235

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score =  135 bits (343), Expect = 7e-39
 Identities = 77/254 (30%), Positives = 117/254 (46%), Gaps = 29/254 (11%)

Query: 16  KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLG-----QDVCYIHCDI 70
           KVAIITGGASGIG    +L  + GAKV I D  +  G   A +L          ++ CD+
Sbjct: 1   KVAIITGGASGIGLATAKLLLKKGAKVAILDRNENPGA--AAELQAINPKVKATFVQCDV 58

Query: 71  SNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIG---GF 127
           ++ +++      A+ KFG++DI+ NNAGILD              E+ I+VN  G     
Sbjct: 59  TSWEQLAAAFKKAIEKFGRVDILINNAGILDEKSYLFAGKLPPPWEKTIDVNLTGVINTT 118

Query: 128 LGAKHAARVMVPQQKGCILFTASACTEIAGLGS----PAYTISKYGILGLVKCLAAEL-G 182
             A H        + G I+   S    +AGL      P Y+ SK+G++G  + LA  L  
Sbjct: 119 YLALHYMDKNKGGKGGVIVNIGS----VAGLYPAPQFPVYSASKHGVVGFTRSLADLLEY 174

Query: 183 QYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDE 242
           + G+RVN + P    T +          + +  ++M          + +A A +YL  D+
Sbjct: 175 KTGVRVNAICPGFTNTPLLPD-------LVAKEAEMLPSAP-TQSPEVVAKAIVYLIEDD 226

Query: 243 SSYVSGQNLVVDGG 256
               +G   +VDGG
Sbjct: 227 EK--NGAIWIVDGG 238

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score =  135 bits (343), Expect = 8e-39
 Identities = 82/260 (31%), Positives = 125/260 (48%), Gaps = 15/260 (5%)

Query: 11  KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL-----GQDVCY 65
            RL GKVA++TG A GIGA     F   GA V +AD+   L E  A  +     G  V  
Sbjct: 3   NRLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLA 62

Query: 66  IHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIG 125
           +  D+++   V   V  A   FG LD++ NNAGI    F   L     D  R   V+  G
Sbjct: 63  VPADVTDAASVAAAVAAAEEAFGPLDVLVNNAGI--NVFADPLAMTDEDWRRCFAVDLDG 120

Query: 126 GFLGAKHAARVMVPQQKGCILFTAS--ACTEIAGLGSPAYTISKYGILGLVKCLAAELGQ 183
            + G +     MV + +G I+  AS  A   I   G   Y ++K+G+LGL + L  E   
Sbjct: 121 AWNGCRAVLPGMVERGRGSIVNIASTHAFKIIP--GCFPYPVAKHGLLGLTRALGIEYAA 178

Query: 184 YGIRVNCVSPYGLATGMSM---KGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLAS 240
             +RVN ++P  + T ++        DPA   +    +  +K    + + +A  A++LAS
Sbjct: 179 RNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPMK-RIGRPEEVAMTAVFLAS 237

Query: 241 DESSYVSGQNLVVDGGFSVV 260
           DE+ +++   + +DGG SV+
Sbjct: 238 DEAPFINATCITIDGGRSVL 257

Length = 260

>gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs

 Score =  135 bits (341), Expect = 1e-38
 Identities = 78/253 (30%), Positives = 125/253 (49%), Gaps = 16/253 (6%)

Query: 14  EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNE 73
           +G VA++TGGASG+G   VE     GAKVVI D+ +  GE +A KLG +  ++  D+++E
Sbjct: 1   KGLVAVVTGGASGLGLATVERLLAQGAKVVILDLPNSPGETVA-KLGDNCRFVPVDVTSE 59

Query: 74  DEVINLVDTAVSKFGKLDIMYNNAGI----LDRSFGSILDTPKSDLERLINVNTIGGFLG 129
            +V   +  A +KFG+LDI+ N AGI       +            +R+INVN IG F  
Sbjct: 60  KDVKAALALAKAKFGRLDIVVNCAGIAVAAKTYNKKGQQPHSLELFQRVINVNLIGTFNV 119

Query: 130 AKHAARVMVPQ------QKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQ 183
            + AA  M         ++G I+ TAS       +G  AY+ SK GI+G+   +A +L  
Sbjct: 120 IRLAAGAMGKNEPDQGGERGVIINTASVAAFEGQIGQAAYSASKGGIVGMTLPIARDLAP 179

Query: 184 YGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDES 243
            GIRV  ++P    T +       P  +   +++              A+   ++   E+
Sbjct: 180 QGIRVVTIAPGLFDTPLLAG---LPEKVRDFLAKQVPFPSRLGDPAEYAHLVQHII--EN 234

Query: 244 SYVSGQNLVVDGG 256
            Y++G+ + +DG 
Sbjct: 235 PYLNGEVIRLDGA 247

HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score =  134 bits (340), Expect = 2e-38
 Identities = 79/250 (31%), Positives = 111/250 (44%), Gaps = 14/250 (5%)

Query: 13  LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISN 72
             GK   +TG A GIG      F E GAKV+  D      ED              D+S+
Sbjct: 6   FSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFLTQEDYPFAT------FVLDVSD 59

Query: 73  EDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKH 132
              V  +    +++ G LD++ N AGIL    G+       D ++   VN  G F   + 
Sbjct: 60  AAAVAQVCQRLLAETGPLDVLVNAAGIL--RMGATDSLSDEDWQQTFAVNAGGAFNLFRA 117

Query: 133 AARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVS 192
                  Q+ G I+   S    +  +G  AY  SK  +  L KC+  EL  YG+R N VS
Sbjct: 118 VMPQFRRQRSGAIVTVGSNAAHVPRIGMAAYGASKAALTSLAKCVGLELAPYGVRCNVVS 177

Query: 193 PYGLATGMSMKGGVDPA----LIESSMSQ--MGNLKGEFLKTDGIANAALYLASDESSYV 246
           P    T M     VD      +I     Q  +G   G+  +   IANA L+LASD +S++
Sbjct: 178 PGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPLGKIARPQEIANAVLFLASDLASHI 237

Query: 247 SGQNLVVDGG 256
           + Q++VVDGG
Sbjct: 238 TLQDIVVDGG 247

Length = 252

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score =  139 bits (352), Expect = 5e-38
 Identities = 82/248 (33%), Positives = 123/248 (49%), Gaps = 14/248 (5%)

Query: 15  GKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNED 74
            +V  ITGGA GIG    + F   G +++I D   +  + LA+ LG +   +  DI++E 
Sbjct: 269 PRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEA 328

Query: 75  EVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAA 134
            V +      +++G+LD++ NNAGI +  F   L+    D  R+ +VN  G F  A+ AA
Sbjct: 329 AVESAFAQIQARWGRLDVLVNNAGIAE-VFKPSLEQSAEDFTRVYDVNLSGAFACARAAA 387

Query: 135 RVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPY 194
           R+M   Q G I+   S  + +A     AY  SK  +  L + LA E    GIRVN V+P 
Sbjct: 388 RLM--SQGGVIVNLGSIASLLALPPRNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAP- 444

Query: 195 GLATGMSMKGGVDPALIESSMSQMGNLK-----GEFLKTDGIANAALYLASDESSYVSGQ 249
               G      V  AL  S  +   +++     G     + +A A  +LAS  +SYV+G 
Sbjct: 445 ----GYIETPAVL-ALKASGRADFDSIRRRIPLGRLGDPEEVAEAIAFLASPAASYVNGA 499

Query: 250 NLVVDGGF 257
            L VDGG+
Sbjct: 500 TLTVDGGW 507

Length = 520

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score =  132 bits (335), Expect = 1e-37
 Identities = 81/257 (31%), Positives = 131/257 (50%), Gaps = 23/257 (8%)

Query: 16  KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISN 72
           KVA++TGGA GIG    E   ++G  V +AD+ ++  ++ A ++   G        D+S+
Sbjct: 1   KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSD 60

Query: 73  EDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKH 132
           +D+V + +D A  KFG  D+M NNAG+       IL+  + +L+++ NVN  G   G + 
Sbjct: 61  KDQVFSAIDQAAEKFGGFDVMVNNAGV--APITPILEITEEELKKVYNVNVKGVLFGIQA 118

Query: 133 AARVMVPQQ-KGCILFTASACTEIAGLGSP---AYTISKYGILGLVKCLAAELGQYGIRV 188
           AAR    Q   G I+   +A +     G+P   AY+ +K+ + GL +  A EL   GI V
Sbjct: 119 AARQFKKQGHGGKII---NAASIAGHEGNPILSAYSSTKFAVRGLTQTAAQELAPKGITV 175

Query: 189 NCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKT---------DGIANAALYLA 239
           N   P  + T   M   +D    E +   +G    EF            + +A    +LA
Sbjct: 176 NAYCPGIVKTP--MWEEIDEETSEIAGKPIGEGFEEFSSEIALGRPSEPEDVAGLVSFLA 233

Query: 240 SDESSYVSGQNLVVDGG 256
           S++S Y++GQ+++VDGG
Sbjct: 234 SEDSDYITGQSILVDGG 250

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

 Score =  139 bits (352), Expect = 2e-37
 Identities = 85/270 (31%), Positives = 124/270 (45%), Gaps = 22/270 (8%)

Query: 5   SSAAPFKRLEGKVAIITGGASGIG-AMAVELFHENGAKVVIADVQ----DKLGEDLADKL 59
                 K L  +VA +TGGA GIG   A  L  E GA VV+AD+     + +  ++  + 
Sbjct: 404 RRMPKEKTLARRVAFVTGGAGGIGRETARRLAAE-GAHVVLADLNLEAAEAVAAEINGQF 462

Query: 60  GQD-VCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERL 118
           G      +  D+++E  V          +G +DI+ NNAGI   S     +T   + +  
Sbjct: 463 GAGRAVALKMDVTDEQAVKAAFADVALAYGGVDIVVNNAGIATSS--PFEETTLQEWQLN 520

Query: 119 INVNTIGGFLGAKHAARVMVPQQ-KGCILFTASACTEIAGLGSPAYTISKYGILGLVKCL 177
           +++   G FL A+ A R M  Q   G I+F AS     AG  + AY+ +K     L +CL
Sbjct: 521 LDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKNASAYSAAKAAEAHLARCL 580

Query: 178 AAELGQYGIRVNCVSPYGLATGMSM-----------KGGVDPALIESSMSQMGNLKGEFL 226
           AAE G YGIRVN V+P  +  G  +             G+    +E   ++   LK    
Sbjct: 581 AAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTLLKRHIF 640

Query: 227 KTDGIANAALYLASDESSYVSGQNLVVDGG 256
             D IA A  +LAS +S   +G  + VDGG
Sbjct: 641 PAD-IAEAVFFLASSKSEKTTGCIITVDGG 669

Length = 676

>gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs

 Score =  131 bits (331), Expect = 5e-37
 Identities = 81/254 (31%), Positives = 134/254 (52%), Gaps = 14/254 (5%)

Query: 16  KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQ-----DVCYIHCDI 70
           KV +ITGG SG+G        + GAK+ + D+ ++  E     L +     +V  I  D+
Sbjct: 4   KVVLITGGGSGLGLATAVRLAKEGAKLSLVDLNEEGLEAAKAALLEIAPDAEVLLIKADV 63

Query: 71  SNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGA 130
           S+E +V   VD  V +FG++D  +NNAGI  +      D    + ++++++N  G F G 
Sbjct: 64  SDEAQVEAYVDATVEQFGRIDGFFNNAGIEGKQ-NLTEDFGADEFDKVVSINLRGVFYGL 122

Query: 131 KHAARVMVPQQKGCILFTASACTEIAGLGSPA-YTISKYGILGLVKCLAAELGQYGIRVN 189
           +   +VM  Q  G I+ TAS    I G+G+ + Y  +K+G++GL +  A E GQYGIR+N
Sbjct: 123 EKVLKVMREQGSGMIVNTASV-GGIRGVGNQSGYAAAKHGVVGLTRNSAVEYGQYGIRIN 181

Query: 190 CVSPYGLATGM---SMK--GGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESS 244
            ++P  + T M   S+K  G  +P         +  +K  F + + +A    +L SD++ 
Sbjct: 182 AIAPGAILTPMVEGSLKQLGPENPEEAGEEFVSVNPMK-RFGEPEEVAAVVAFLLSDDAG 240

Query: 245 YVSGQNLVVDGGFS 258
           YV+   + +DGG S
Sbjct: 241 YVNAAVVPIDGGQS 254

Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score =  130 bits (330), Expect = 6e-37
 Identities = 72/243 (29%), Positives = 108/243 (44%), Gaps = 30/243 (12%)

Query: 11  KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIAD-VQDKLGEDLADKLGQDVCYIHC- 68
             L+GKVA+ITG +SGIG        E GAKVV+A   +++L E LAD++G         
Sbjct: 2   TTLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERL-EALADEIGAGAALALAL 60

Query: 69  DISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFL 128
           D+++   V   ++    +FG++DI+ NNAG L      + +    D +R+I+ N  G   
Sbjct: 61  DVTDRAAVEAAIEALPEEFGRIDILVNNAG-LALG-DPLDEADLDDWDRMIDTNVKGLLN 118

Query: 129 GAKHAARVMVPQQKGCILFTASACTEIAGL----GSPAYTISKYGILGLVKCLAAELGQY 184
           G +     MV ++ G I+   S    IAG     G   Y  +K  +      L  EL   
Sbjct: 119 GTRAVLPGMVERKSGHIINLGS----IAGRYPYPGGAVYGATKAAVRAFSLGLRQELAGT 174

Query: 185 GIRVNCVSPYGLATGMSMKGGVDPALI-----ESSMSQMGNLK--GEFLKTDGIANAALY 237
           GIRV  +SP          G V+         E    +   +   G  L  + IA A L+
Sbjct: 175 GIRVTVISP----------GLVETTEFSTVRFEGDDERADKVYKGGTALTPEDIAEAVLF 224

Query: 238 LAS 240
            A+
Sbjct: 225 AAT 227

Length = 246

>gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional

 Score =  131 bits (331), Expect = 8e-37
 Identities = 64/202 (31%), Positives = 95/202 (47%), Gaps = 7/202 (3%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDIS 71
            L GKV  ITGGA GIG          GA+V I D+ + L ++ A +LG  V     D++
Sbjct: 2   DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVV-GGPLDVT 60

Query: 72  NEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAK 131
           +       +D   +  G +D++ NNAG++    G  LD P +   R+++VN  G  LG+K
Sbjct: 61  DPASFAAFLDAVEADLGPIDVLVNNAGVM--PVGPFLDEPDAVTRRILDVNVYGVILGSK 118

Query: 132 HAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCV 191
            AA  MVP+ +G ++  AS   +I   G   Y  SK+ ++G       EL   G+ V+ V
Sbjct: 119 LAAPRMVPRGRGHVVNVASLAGKIPVPGMATYCASKHAVVGFTDAARLELRGTGVHVSVV 178

Query: 192 SP----YGLATGMSMKGGVDPA 209
            P      L  G     G    
Sbjct: 179 LPSFVNTELIAGTGGAKGFKNV 200

Length = 273

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score =  130 bits (328), Expect = 9e-37
 Identities = 67/248 (27%), Positives = 101/248 (40%), Gaps = 15/248 (6%)

Query: 10  FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADV-QDKLGEDLADKLGQDVCYIHC 68
              L+GKV  ITGG  G+G          GA+V +       L + L       +     
Sbjct: 2   EHSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGI 61

Query: 69  DISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFL 128
           D+ +       VD    +FG+LD + N AG     +G+I D      +R+  VN      
Sbjct: 62  DLVDPQAARRAVDEVNRQFGRLDALVNIAGAF--VWGTIADGDADTWDRMYGVNVKTTLN 119

Query: 129 GAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRV 188
            +K A   +     G I+   +     AG G  AY  +K G+  L + LAAEL   GI V
Sbjct: 120 ASKAALPALTASGGGRIVNIGAGAALKAGPGMGAYAAAKAGVARLTEALAAELLDRGITV 179

Query: 189 NCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSG 248
           N V P  + T              + M    +    ++  + IA    +L SDE+  ++G
Sbjct: 180 NAVLPSIIDTPP----------NRADMP-DADF-SRWVTPEQIAAVIAFLLSDEAQAITG 227

Query: 249 QNLVVDGG 256
            ++ VDGG
Sbjct: 228 ASIPVDGG 235

Length = 239

>gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional

 Score =  130 bits (329), Expect = 9e-37
 Identities = 86/258 (33%), Positives = 119/258 (46%), Gaps = 22/258 (8%)

Query: 11  KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDI 70
            RL+GK A+ITGG SGIG      F   GA+V I        E    +LG+    I  D 
Sbjct: 2   SRLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADA 61

Query: 71  SNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGF--- 127
            +      L       FG+LD ++ NAG+    F  + D  ++  +R  N N  G +   
Sbjct: 62  GDVAAQKALAQALAEAFGRLDAVFINAGVAK--FAPLEDWDEAMFDRSFNTNVKGPYFLI 119

Query: 128 -----LGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELG 182
                L A  A+          I+   S    I    S  Y  SK  +L L K L+ EL 
Sbjct: 120 QALLPLLANPAS----------IVLNGSINAHIGMPNSSVYAASKAALLSLAKTLSGELL 169

Query: 183 QYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNL--KGEFLKTDGIANAALYLAS 240
             GIRVN VSP  + T +  K G+  A +++  +Q+  L   G F   + IA A LYLAS
Sbjct: 170 PRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPLGRFGTPEEIAKAVLYLAS 229

Query: 241 DESSYVSGQNLVVDGGFS 258
           DES+++ G  ++VDGG S
Sbjct: 230 DESAFIVGSEIIVDGGMS 247

Length = 249

>gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional

 Score =  130 bits (328), Expect = 1e-36
 Identities = 80/261 (30%), Positives = 130/261 (49%), Gaps = 12/261 (4%)

Query: 4   PSSAAPFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVI-----ADVQDKLGEDLADK 58
            S    F  L G+VA++TG A G+G          GA V++     A ++  +    A  
Sbjct: 1   MSILQRFS-LAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAG 59

Query: 59  LGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERL 118
              +   +  DI++E+ V        ++ G+LDI+ NN G  DR    + +   + +  L
Sbjct: 60  GAAE--ALAFDIADEEAVAAAFARIDAEHGRLDILVNNVGARDRR--PLAELDDAAIRAL 115

Query: 119 INVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLA 178
           +  + +   L ++ AA+ M  Q  G I+   S   ++A  G   Y  +K G+ GL++ LA
Sbjct: 116 LETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARAGDAVYPAAKQGLTGLMRALA 175

Query: 179 AELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYL 238
           AE G +GI  N ++P   AT  +     DPA+    ++Q   L G + + + IA AA++L
Sbjct: 176 AEFGPHGITSNAIAPGYFATETNAAMAADPAVGP-WLAQRTPL-GRWGRPEEIAGAAVFL 233

Query: 239 ASDESSYVSGQNLVVDGGFSV 259
           AS  +SYV+G  L VDGG+SV
Sbjct: 234 ASPAASYVNGHVLAVDGGYSV 254

Length = 256

>gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional

 Score =  129 bits (327), Expect = 1e-36
 Identities = 80/253 (31%), Positives = 121/253 (47%), Gaps = 17/253 (6%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDIS 71
              GK  ++TG +SGIG        + GA+VV A       + LA + G +   +  D+ 
Sbjct: 6   DFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEP--LRLDVG 63

Query: 72  NEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAK 131
           ++      +  A++  G  D + N AGI   S  S LD      +R++ VN  G  L A+
Sbjct: 64  DDAA----IRAALAAAGAFDGLVNCAGI--ASLESALDMTAEGFDRVMAVNARGAALVAR 117

Query: 132 HAARVMVPQQKGCILFTASACTEIAGL-GSP---AYTISKYGILGLVKCLAAELGQYGIR 187
           H AR M+   +G  +   S+    A L G P   AY  SK  +  + + L  ELG +GIR
Sbjct: 118 HVARAMIAAGRGGSIVNVSS---QAALVGLPDHLAYCASKAALDAITRVLCVELGPHGIR 174

Query: 188 VNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVS 247
           VN V+P    T M+ +   DP      ++ +    G F + D +A   L+L SD +S VS
Sbjct: 175 VNSVNPTVTLTPMAAEAWSDPQKSGPMLAAIP--LGRFAEVDDVAAPILFLLSDAASMVS 232

Query: 248 GQNLVVDGGFSVV 260
           G +L VDGG++  
Sbjct: 233 GVSLPVDGGYTAR 245

Length = 245

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score =  128 bits (324), Expect = 4e-36
 Identities = 63/190 (33%), Positives = 94/190 (49%), Gaps = 8/190 (4%)

Query: 17  VAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIH---CDISNE 73
           + +ITGG SGIG +    F + GAKVVI D+ +K  E+ A+ + +    +H   CD+S  
Sbjct: 1   IVLITGGGSGIGRLLALEFAKRGAKVVILDINEKGAEETANNVRKAGGKVHYYKCDVSKR 60

Query: 74  DEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHA 133
           +EV         + G + I+ NNAG+   S   +L+ P  ++E+   VNT+  F   K  
Sbjct: 61  EEVYEAAKKIKKEVGDVTILINNAGV--VSGKKLLELPDEEIEKTFEVNTLAHFWTTKAF 118

Query: 134 ARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQY---GIRVNC 190
              M+ +  G I+  AS    I+  G   Y  SK   +G  + L  EL  Y   GI+   
Sbjct: 119 LPDMLERNHGHIVTIASVAGLISPAGLADYCASKAAAVGFHESLRLELKAYGKPGIKTTL 178

Query: 191 VSPYGLATGM 200
           V PY + TGM
Sbjct: 179 VCPYFINTGM 188

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score =  128 bits (323), Expect = 5e-36
 Identities = 68/191 (35%), Positives = 92/191 (48%), Gaps = 9/191 (4%)

Query: 15  GKVAIITGGASGIGAMAVELFHENGAKVVI-ADVQDKLGE------DLADKLGQDVCYIH 67
           GK  +ITGG+SGIG    +   + GA V+I A  + KL E        A+  GQ V YI 
Sbjct: 1   GKHVLITGGSSGIGKALAKELVKEGANVIIVARSESKLEEAVEEIEAEANASGQKVSYIS 60

Query: 68  CDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGF 127
            D+S+ +EV      AV K G  D++ N AGI     G   D    + ER ++VN  G  
Sbjct: 61  ADLSDYEEVEQAFAQAVEKGGPPDLVVNCAGIS--IPGLFEDLTAEEFERGMDVNYFGSL 118

Query: 128 LGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIR 187
             A     +M  Q+ G I+F +S    +   G  AY  SK+ + GL + L  EL  Y IR
Sbjct: 119 NVAHAVLPLMKEQRPGHIVFVSSQAALVGIYGYSAYCPSKFALRGLAESLRQELKPYNIR 178

Query: 188 VNCVSPYGLAT 198
           V+ V P    T
Sbjct: 179 VSVVYPPDTDT 189

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score =  127 bits (322), Expect = 9e-36
 Identities = 80/267 (29%), Positives = 123/267 (46%), Gaps = 37/267 (13%)

Query: 15  GKVAIITGGASGIG-AMAVELFHENGAKVVIADVQD-----KLGEDLADKLGQDVCYIHC 68
           GKVA++TG  SGIG  +A  L    GA +V+    D      +   LA K G  V Y   
Sbjct: 2   GKVALVTGSTSGIGLGIARALAAA-GANIVLNGFGDAAEIEAVRAGLAAKHGVKVLYHGA 60

Query: 69  DISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFL 128
           D+S    + ++V  A  +FG +DI+ NNAGI  +    I D P    + +I +N    F 
Sbjct: 61  DLSKPAAIEDMVAYAQRQFGGVDILVNNAGI--QHVAPIEDFPTEKWDAIIALNLSAVFH 118

Query: 129 GAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRV 188
             + A   M  Q  G I+  AS    +A     AY  +K+G++GL K +A E    G+  
Sbjct: 119 TTRLALPHMKKQGWGRIINIASVHGLVASANKSAYVAAKHGVVGLTKVVALETAGTGVTC 178

Query: 189 NCVSPYGLATGMSMKGGVDPALIE---SSMSQMGNLKGE---------------FLKTDG 230
           N + P          G V   L+E   S+++Q   +  E               F+  + 
Sbjct: 179 NAICP----------GWVLTPLVEKQISALAQKNGVPQEQAARELLLEKQPSKQFVTPEQ 228

Query: 231 IANAALYLASDESSYVSGQNLVVDGGF 257
           + + A++LASD +S ++G  + VDGG+
Sbjct: 229 LGDTAVFLASDAASQITGTAVSVDGGW 255

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs

 Score =  127 bits (321), Expect = 1e-35
 Identities = 89/263 (33%), Positives = 130/263 (49%), Gaps = 22/263 (8%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDIS 71
            L+G+VA+ITGG SG+G   VE F   GAKV + D   +   +L    G  V  +  D+ 
Sbjct: 1   WLKGEVALITGGGSGLGRALVERFVAEGAKVAVLDRSAEKVAELRADFGDAVVGVEGDVR 60

Query: 72  NEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDL----ERLINVNTIGGF 127
           +  +    V   V +FGKLD    NAGI D S  S++D P+  L    + L ++N  G  
Sbjct: 61  SLADNERAVARCVERFGKLDCFIGNAGIWDYST-SLVDIPEEKLDEAFDELFHINVKGYI 119

Query: 128 LGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIR 187
           LGAK A   +    +G ++FT S      G G P YT SK+ ++GLVK LA EL  + IR
Sbjct: 120 LGAKAALPALY-ATEGSVIFTVSNAGFYPGGGGPLYTASKHAVVGLVKQLAYELAPH-IR 177

Query: 188 VNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKT----------DGIANAALY 237
           VN V+P G+ T   ++G    +L +   S       + LK+          +    A ++
Sbjct: 178 VNGVAPGGMVT--DLRGP--ASLGQGETSISTPPLDDMLKSILPLGFAPEPEDYTGAYVF 233

Query: 238 LAS-DESSYVSGQNLVVDGGFSV 259
           LAS  ++   +G  +  DGG  V
Sbjct: 234 LASRGDNRPATGTVINYDGGMGV 256

cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187611 cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs

 Score =  127 bits (321), Expect = 1e-35
 Identities = 77/256 (30%), Positives = 118/256 (46%), Gaps = 28/256 (10%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQD--VCYIHCD 69
           R +G+V ++TG   G+G      F E GAKVV+ D+              D  V  I   
Sbjct: 2   RFDGRVVLVTGAGGGLGRAYALAFAERGAKVVVNDLGGDRKGSGKSSSAADKVVDEIKAA 61

Query: 70  ----ISNEDEVIN---LVDTAVSKFGKLDIMYNNAGIL-DRSFGSILDTPKSDLERLINV 121
               ++N D V +   +V TA+  FG++DI+ NNAGIL DRSF  + +    D + ++ V
Sbjct: 62  GGKAVANYDSVEDGEKIVKTAIDAFGRVDILVNNAGILRDRSFAKMSE---EDWDLVMRV 118

Query: 122 NTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAEL 181
           +  G F   + A   M  Q+ G I+ T+SA       G   Y+ +K G+LGL   LA E 
Sbjct: 119 HLKGSFKVTRAAWPYMRKQKFGRIINTSSAAGLYGNFGQANYSAAKLGLLGLSNTLAIEG 178

Query: 182 GQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASD 241
            +Y I  N ++P    + M+          E+ M +      + LK + +A   LYL  +
Sbjct: 179 AKYNITCNTIAP-AAGSRMT----------ETVMPEDLF---DALKPEYVAPLVLYLCHE 224

Query: 242 ESSYVSGQNLVVDGGF 257
               V+G    V  G+
Sbjct: 225 SCE-VTGGLFEVGAGW 239

Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 250

>gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase

 Score =  127 bits (320), Expect = 2e-35
 Identities = 85/248 (34%), Positives = 134/248 (54%), Gaps = 8/248 (3%)

Query: 13  LEGKVAIITGGASGIG-AMAVELFHENGAKVVIADVQD-KLGEDLADKLGQDVCYIHCDI 70
           LEGKVA++TG  +G+G  +AV L  E GA +V A   +    +   + LG+    +  D+
Sbjct: 3   LEGKVALVTGANTGLGQGIAVGL-AEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADL 61

Query: 71  SNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGA 130
           S+ + +  LVD+AV +FG +DI+ NNAGI+ R+     +  + D + ++NVN    F   
Sbjct: 62  SDIEAIKALVDSAVEEFGHIDILVNNAGIIRRA--DAEEFSEKDWDDVMNVNLKSVFFLT 119

Query: 131 KHAARVMVPQ-QKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVN 189
           + AA+  + Q + G I+  AS  +   G+  P+YT SK+ + GL K LA E    GI VN
Sbjct: 120 QAAAKHFLKQGRGGKIINIASMLSFQGGIRVPSYTASKHAVAGLTKLLANEWAAKGINVN 179

Query: 190 CVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQ 249
            ++P  +AT  +     D     + + ++    G +   D I   A++LAS  S YV+G 
Sbjct: 180 AIAPGYMATNNTQALRADEDRNAAILERIP--AGRWGTPDDIGGPAVFLASSASDYVNGY 237

Query: 250 NLVVDGGF 257
            L VDGG+
Sbjct: 238 TLAVDGGW 245

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248

>gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional

 Score =  127 bits (319), Expect = 2e-35
 Identities = 89/252 (35%), Positives = 135/252 (53%), Gaps = 13/252 (5%)

Query: 13  LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCD 69
           L GK A+ITG ++GIG      + E GA+V IA       E LAD++   G  V  + CD
Sbjct: 7   LHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCD 66

Query: 70  ISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLG 129
           +S   +V +++D   ++ G +DI   NAGI+  +   +LD P  + +RL N N  G FL 
Sbjct: 67  VSQHQQVTSMLDQVTAELGGIDIAVCNAGII--TVTPMLDMPLEEFQRLQNTNVTGVFLT 124

Query: 130 AKHAARVMVPQQK-GCILFTASACTEIAGLGSPA--YTISKYGILGLVKCLAAELGQYGI 186
           A+ AA+ MV Q + G I+ TAS    I  +      Y  SK  ++ L K +A EL  + I
Sbjct: 125 AQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHYCASKAAVIHLTKAMAVELAPHKI 184

Query: 187 RVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYV 246
           RVN VSP  + T +     V+P      + +     G   + + +A   LYLAS+ SSY+
Sbjct: 185 RVNSVSPGYILTEL-----VEPYTEYQPLWEPKIPLGRLGRPEELAGLYLYLASEASSYM 239

Query: 247 SGQNLVVDGGFS 258
           +G ++V+DGG++
Sbjct: 240 TGSDIVIDGGYT 251

Length = 253

>gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional

 Score =  126 bits (319), Expect = 3e-35
 Identities = 74/253 (29%), Positives = 121/253 (47%), Gaps = 13/253 (5%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLG----EDLADKLGQDVCYIH 67
            L+G+VA +TG  SGIG        + GA V + D++   G     +  +  G+    I 
Sbjct: 5   DLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIA 64

Query: 68  CDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGF 127
            D++++ ++   V    ++ G L +  N AGI + +     +  +   + ++++N  G F
Sbjct: 65  ADVTSKADLRAAVARTEAELGALTLAVNAAGIANAN--PAEEMEEEQWQTVMDINLTGVF 122

Query: 128 LGAKHAARVMVPQQKGCILFTASACTEIA--GLGSPAYTISKYGILGLVKCLAAELGQYG 185
           L  +  AR M+    G I+  AS    I   GL    Y  SK G++ L K LA E    G
Sbjct: 123 LSCQAEARAMLENGGGSIVNIASMSGIIVNRGLLQAHYNASKAGVIHLSKSLAMEWVGRG 182

Query: 186 IRVNCVSPYGLATGMSMKGG-VDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESS 244
           IRVN +SP   AT M+ +   V    +    + M  +     K D +   A++L SD +S
Sbjct: 183 IRVNSISPGYTATPMNTRPEMVHQTKLFEEQTPMQRMA----KVDEMVGPAVFLLSDAAS 238

Query: 245 YVSGQNLVVDGGF 257
           + +G +L+VDGGF
Sbjct: 239 FCTGVDLLVDGGF 251

Length = 254

>gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional

 Score =  125 bits (317), Expect = 6e-35
 Identities = 80/253 (31%), Positives = 119/253 (47%), Gaps = 27/253 (10%)

Query: 13  LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISN 72
           L G+V ++TGG  GIGA     F   GA VV+   +     D     G+   +   D+ +
Sbjct: 4   LTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPETVD-----GRPAEFHAADVRD 58

Query: 73  EDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKH 132
            D+V  LVD  V + G+LD++ NNAG     +    +      E+++ +N +   L A+ 
Sbjct: 59  PDQVAALVDAIVERHGRLDVLVNNAG--GSPYALAAEASPRFHEKIVELNLLAPLLVAQA 116

Query: 133 AARVMVPQ-QKGCILFTASACTEIAGL----GSPAYTISKYGILGLVKCLAAELGQYGIR 187
           A  VM  Q   G I+   S    ++G     G+ AY  +K G+L L + LA E     +R
Sbjct: 117 ANAVMQQQPGGGSIVNIGS----VSGRRPSPGTAAYGAAKAGLLNLTRSLAVEWAP-KVR 171

Query: 188 VNCVSPYGL----ATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDES 243
           VN V   GL     + +        A + +++  +G L         IA A L+LASD +
Sbjct: 172 VNAVVV-GLVRTEQSELHYGDAEGIAAVAATVP-LGRLA----TPADIAWACLFLASDLA 225

Query: 244 SYVSGQNLVVDGG 256
           SYVSG NL V GG
Sbjct: 226 SYVSGANLEVHGG 238

Length = 252

>gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR

 Score =  125 bits (315), Expect = 8e-35
 Identities = 69/250 (27%), Positives = 115/250 (46%), Gaps = 16/250 (6%)

Query: 16  KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLG-EDLADKLGQDVCYIHCDISNED 74
           +V ++TG + G+GA     F   GA+VV+   +     E +A + G+    I  D+ + D
Sbjct: 1   QVVLVTGASRGLGAAIARSFAREGARVVVNYYRSTESAEAVAAEAGERAIAIQADVRDRD 60

Query: 75  EVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFL-GAKHA 133
           +V  +++ A + FG +D + NNA ++D  F          ++       + G + GA + 
Sbjct: 61  QVQAMIEEAKNHFGPVDTIVNNA-LIDFPFDPDQRKTFDTIDWEDYQQQLEGAVKGALNL 119

Query: 134 ARVMVPQQK----GCILFTASACTEIAGLGSPA---YTISKYGILGLVKCLAAELGQYGI 186
            + ++P  K    G ++   +  T +          YT +K  +LG  + +A ELG YGI
Sbjct: 120 LQAVLPDFKERGSGRVI---NIGTNLFQNPVVPYHDYTTAKAALLGFTRNMAKELGPYGI 176

Query: 187 RVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYV 246
            VN VS  GL             + ++         G+      IA+A L+ AS  +  V
Sbjct: 177 TVNMVSG-GLLKVTDASAATPKEVFDAIAQ--TTPLGKVTTPQDIADAVLFFASPWARAV 233

Query: 247 SGQNLVVDGG 256
           +GQNLVVDGG
Sbjct: 234 TGQNLVVDGG 243

This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score =  124 bits (313), Expect = 1e-34
 Identities = 78/255 (30%), Positives = 120/255 (47%), Gaps = 20/255 (7%)

Query: 13  LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL-------GQDVCY 65
           L+ +  +ITGG+ G+G         +GA V++ D+    G   AD +       G     
Sbjct: 4   LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALG 63

Query: 66  IHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGIL-DRSFGSILDTPKSDLERLINVNTI 124
           +  D+ +       +D  V +FG+LDI+ NNAGI  D +F  +      + + +I+VN  
Sbjct: 64  LAFDVRDFAATRAALDAGVEEFGRLDILVNNAGIATDAAFAELSI---EEWDDVIDVNLD 120

Query: 125 GGFLGAKHAARVMV-PQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQ 183
           G F   + A   M+  ++ G I+  AS        G   Y  SK G++GL K LA EL  
Sbjct: 121 GFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRGQVNYAASKAGLIGLTKTLANELAP 180

Query: 184 YGIRVNCVSPYGLATGMSMKGGVDPALIES-SMSQMGNLKGEFLKTDGIANAALYLASDE 242
            GI VN V+P  + T M+        L+    + ++G         D +A    +L SD 
Sbjct: 181 RGITVNAVAPGAINTPMADNAAPTEHLLNPVPVQRLGEP-------DEVAALVAFLVSDA 233

Query: 243 SSYVSGQNLVVDGGF 257
           +SYV+GQ + VDGGF
Sbjct: 234 ASYVTGQVIPVDGGF 248

Length = 249

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score =  124 bits (314), Expect = 2e-34
 Identities = 51/187 (27%), Positives = 87/187 (46%), Gaps = 4/187 (2%)

Query: 16  KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLG-EDLADKLGQDVCYIHCDISNED 74
           KV +ITG +SGIG          G +V IA  ++    E L + L  ++  +  D+++E+
Sbjct: 1   KVVLITGCSSGIGLALALALAAQGYRV-IATARNPDKLESLGELLNDNLEVLELDVTDEE 59

Query: 75  EVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAA 134
            +   V   + +FG++D++ NNAG     FG + +T   ++  L  VN  G     +   
Sbjct: 60  SIKAAVKEVIERFGRIDVLVNNAGYG--LFGPLEETSIEEVRELFEVNVFGPLRVTRAFL 117

Query: 135 RVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPY 194
            +M  Q  G I+  +S    +       Y  SK  +  L + L  EL  +GI+V  + P 
Sbjct: 118 PLMRKQGSGRIVNVSSVAGLVPTPFLGPYCASKAALEALSESLRLELAPFGIKVTIIEPG 177

Query: 195 GLATGMS 201
            + TG +
Sbjct: 178 PVRTGFA 184

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs

 Score =  123 bits (311), Expect = 2e-34
 Identities = 73/259 (28%), Positives = 125/259 (48%), Gaps = 31/259 (11%)

Query: 14  EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNE 73
           +GKVA+IT  A GIG      F   GA V+  D+ ++      ++    +     D++++
Sbjct: 1   DGKVALITAAAQGIGRAIALAFAREGANVIATDINEEK-LKELERGPG-ITTRVLDVTDK 58

Query: 74  DEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHA 133
           ++V         + G++D+++N AG +    GSILD    D +  +N+N    +L  K  
Sbjct: 59  EQV----AALAKEEGRIDVLFNCAGFV--HHGSILDCEDDDWDFAMNLNVRSMYLMIKAV 112

Query: 134 ARVMVPQQKGCILFTASACTEIAGL-GSPAYTISKYGILGLVKCLAAELGQYGIRVNCVS 192
              M+ ++ G I+  +S  + I G+     Y+ +K  ++GL K +AA+  Q GIR N + 
Sbjct: 113 LPKMLARKDGSIINMSSVASSIKGVPNRFVYSTTKAAVIGLTKSVAADFAQQGIRCNAIC 172

Query: 193 PYGLATGMSMKGGVDPALIESSMSQMGN------------LKGEFLKTDGIANAALYLAS 240
           P          G VD   +E  +    +              G     + +A  A+YLAS
Sbjct: 173 P----------GTVDTPSLEERIQAQPDPEEALKAFAARQPLGRLATPEEVAALAVYLAS 222

Query: 241 DESSYVSGQNLVVDGGFSV 259
           DES+YV+G  +V+DGG+S+
Sbjct: 223 DESAYVTGTAVVIDGGWSL 241

Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241

>gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional

 Score =  124 bits (312), Expect = 3e-34
 Identities = 81/255 (31%), Positives = 126/255 (49%), Gaps = 20/255 (7%)

Query: 12  RLEGKVAIITGGASGIG-AMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIH 67
           R + KVAI+TG A GIG A A  L  E GA VV+AD+  +  E +A ++   G     + 
Sbjct: 3   RFDDKVAIVTGAAGGIGQAYAEALARE-GASVVVADINAEGAERVAKQIVADGGTAIAVQ 61

Query: 68  CDISNEDEVINLVDTAVSKFGKLDIMYNNAGIL-DRSFGSILDTPKSDLERLINVNTIGG 126
            D+S+ D    + D  VS FG +D + NNA I        ++  P    ++ ++VN  G 
Sbjct: 62  VDVSDPDSAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGA 121

Query: 127 FLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGI 186
            +  +   + M  +  G I+  +S     A L S  Y ++K G+ GL + LA ELG   I
Sbjct: 122 LVCTRAVYKHMAKRGGGAIVNQSSTA---AWLYSNFYGLAKVGLNGLTQQLARELGGMNI 178

Query: 187 RVNCVSPYGLAT----GMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDE 242
           RVN ++P  + T     ++ K  V   +    +S+MG         + +    L+L SDE
Sbjct: 179 RVNAIAPGPIDTEATRTVTPKEFVADMVKGIPLSRMG-------TPEDLVGMCLFLLSDE 231

Query: 243 SSYVSGQNLVVDGGF 257
           +S+++GQ   VDGG 
Sbjct: 232 ASWITGQIFNVDGGQ 246

Length = 250

>gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional

 Score =  123 bits (311), Expect = 5e-34
 Identities = 76/256 (29%), Positives = 126/256 (49%), Gaps = 19/256 (7%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVI---ADVQDKLGEDLADKLGQDVCYIHC 68
            L+ KV I+TGGASGIGA       E GA  VI   +   D+  E+L   L     ++  
Sbjct: 4   NLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELR-ALQPRAEFVQV 62

Query: 69  DISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFL 128
           D++++ +  + V+  V+KFG++D + NNAG+ D   G  L+  +      +  N I  ++
Sbjct: 63  DLTDDAQCRDAVEQTVAKFGRIDGLVNNAGVND---GVGLEAGREAFVASLERNLIHYYV 119

Query: 129 GAKHAARVMVP---QQKGCILFTASACTEIAGLG-SPAYTISKYGILGLVKCLAAELGQY 184
            A +     +P     +G I+  +S  T + G G +  Y  +K   L L +  A  L + 
Sbjct: 120 MAHYC----LPHLKASRGAIVNISSK-TALTGQGGTSGYAAAKGAQLALTREWAVALAKD 174

Query: 185 GIRVNCVSPYGLATGMS---MKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASD 241
           G+RVN V P  + T +    +    DP    ++++    L       + IA+ A++L S+
Sbjct: 175 GVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIPLGHRMTTAEEIADTAVFLLSE 234

Query: 242 ESSYVSGQNLVVDGGF 257
            SS+ +GQ L VDGG+
Sbjct: 235 RSSHTTGQWLFVDGGY 250

Length = 258

>gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional

 Score =  123 bits (310), Expect = 6e-34
 Identities = 75/248 (30%), Positives = 125/248 (50%), Gaps = 6/248 (2%)

Query: 13  LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCD 69
           L GK+A++TG + GIG    +L  + GA V+++  +    + +AD +   G     + C 
Sbjct: 6   LTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACH 65

Query: 70  ISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLG 129
           I   +++  L      + G+LDI+ NNA   +  FG ILDT     ++ ++VN  G F  
Sbjct: 66  IGEMEQIDALFAHIRERHGRLDILVNNAAA-NPYFGHILDTDLGAFQKTVDVNIRGYFFM 124

Query: 130 AKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVN 189
           +  A ++M  Q  G I+  AS      G     Y+I+K  ++ + K  A E   +GIRVN
Sbjct: 125 SVEAGKLMKEQGGGSIVNVASVNGVSPGDFQGIYSITKAAVISMTKAFAKECAPFGIRVN 184

Query: 190 CVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQ 249
            + P    T  +     + A+++ +++ +        +   +A A LYLASD SSY +G+
Sbjct: 185 ALLPGLTDTKFASALFKNDAILKQALAHIP--LRRHAEPSEMAGAVLYLASDASSYTTGE 242

Query: 250 NLVVDGGF 257
            L VDGG+
Sbjct: 243 CLNVDGGY 250

Length = 252

>gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1

 Score =  122 bits (309), Expect = 1e-33
 Identities = 85/261 (32%), Positives = 119/261 (45%), Gaps = 31/261 (11%)

Query: 11  KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIA---DVQDKLGE--DLADKLGQDVCY 65
            +L+GK A+ITGG SGIG      F   GA V I    + +D   E   L ++ G+    
Sbjct: 22  GKLKGKKALITGGDSGIGRAVAIAFAREGADVAINYLPEEEDDAEETKKLIEEEGRKCLL 81

Query: 66  IHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIG 125
           I  D+ +E    +LV   V +FGKLDI+ NNA        SI D     LE+    N   
Sbjct: 82  IPGDLGDESFCRDLVKEVVKEFGKLDILVNNAAYQHPQE-SIEDITTEQLEKTFRTNIFS 140

Query: 126 GFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPA---YTISKYGILGLVKCLAAELG 182
            F   K A   +  ++   I+ T S     A  GSP    Y  +K  I+   + L+ +L 
Sbjct: 141 MFYLTKAALPHL--KKGSSIINTTSV---TAYKGSPHLLDYAATKGAIVAFTRGLSLQLA 195

Query: 183 QYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQ-------MGNLKGEFLKTDGIANAA 235
           + GIRVN V+P          G +   LI SS  +            G   +   +A A 
Sbjct: 196 EKGIRVNAVAP----------GPIWTPLIPSSFPEEKVSEFGSQVPMGRAGQPAEVAPAY 245

Query: 236 LYLASDESSYVSGQNLVVDGG 256
           ++LAS +SSYV+GQ L V+GG
Sbjct: 246 VFLASQDSSYVTGQVLHVNGG 266

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score =  122 bits (308), Expect = 2e-33
 Identities = 64/229 (27%), Positives = 100/229 (43%), Gaps = 14/229 (6%)

Query: 13  LEGKVAIITGGASGIGAMAVELFHENGAKVVI----ADVQDKLGEDLADKLGQDVCYIHC 68
           ++GK A+ITG +SGIGA   +     G  +++     D  + L ++L DK G +V  I  
Sbjct: 4   MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPA 63

Query: 69  DISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFL 128
           D+S+ + +  L D    + G +D++ NNAG     FG  L+    + E +I +N +    
Sbjct: 64  DLSDPEALERLEDELKERGGPIDVLVNNAGFGT--FGPFLELSLDEEEEMIQLNILALTR 121

Query: 129 GAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRV 188
             K     MV +  G I+   SA   I       Y+ +K  +L   + L  EL   G++V
Sbjct: 122 LTKAVLPGMVERGAGHIINIGSAAGLIPTPYMAVYSATKAFVLSFSEALREELKGTGVKV 181

Query: 189 NCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALY 237
             V P    T      G D       +   G L    L  + +A AAL 
Sbjct: 182 TAVCPGPTRTEFFDAKGSD-----VYLLSPGEL---VLSPEDVAEAALK 222

Length = 265

>gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  121 bits (305), Expect = 3e-33
 Identities = 88/260 (33%), Positives = 135/260 (51%), Gaps = 26/260 (10%)

Query: 12  RLEGKVAIITGGASGIG-AMAVELFHENGAKVVIADV-QDKLGEDLAD--KLGQDVCYIH 67
            L+ KV +ITGGA G+G AMA  L  + GAK+ + D+ Q+KL E +A+   LG +V    
Sbjct: 2   DLKDKVIVITGGAQGLGRAMAEYL-AQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYA 60

Query: 68  CDISNEDEVINLVDTAVSKFGKLDIMYNNAGIL-DRSFGSILD---TPKSDLER---LIN 120
            ++++E++V          FG+L+ + NNAGIL D       D   T K  LE+   +I+
Sbjct: 61  ANVTDEEDVEATFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVID 120

Query: 121 VNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAE 180
           VN  G FL  + AA  M+      ++   S+      +G   Y+ SK G+  +    A E
Sbjct: 121 VNLTGVFLCGREAAAKMIESGSKGVIINISSIARAGNMGQTNYSASKAGVAAMTVTWAKE 180

Query: 181 LGQYGIRVNCVSPYGLATGM--SMKGGVDPALIE--SSMSQMGNLKGEFLKTDGIANAAL 236
           L +YGIRV  ++P  + T M  +MK    P  +E    M  +G L GE    + IA+   
Sbjct: 181 LARYGIRVAAIAPGVIETEMTAAMK----PEALERLEKMIPVGRL-GE---PEEIAHTVR 232

Query: 237 YLASDESSYVSGQNLVVDGG 256
           ++   E+ YV+G+ L +DGG
Sbjct: 233 FII--ENDYVTGRVLEIDGG 250

Length = 253

>gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional

 Score =  121 bits (305), Expect = 4e-33
 Identities = 81/261 (31%), Positives = 127/261 (48%), Gaps = 26/261 (9%)

Query: 13  LEGKVAIITGGASGIG-AMAVELFHENGAKVVI-ADVQDKLGEDLA---DKLGQDVCYIH 67
           L+GKV +++G   G+G  +AV      GA VV+ A   ++L +++A   D LG+    + 
Sbjct: 3   LKGKVVVVSGVGPGLGRTLAVR-AARAGADVVLAARTAERL-DEVAAEIDDLGRRALAVP 60

Query: 68  CDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGF 127
            DI++ED+  NLV  A+ +FG++D + NNA     S   + D   +    +I +N     
Sbjct: 61  TDITDEDQCANLVALALERFGRVDALVNNA-FRVPSMKPLADADFAHWRAVIELNV---- 115

Query: 128 LGAKHAARVMVP---QQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQY 184
           LG     +   P   +  G I+   S     +     AY ++K  +L   + LA ELG  
Sbjct: 116 LGTLRLTQAFTPALAESGGSIVMINSMVLRHSQPKYGAYKMAKGALLAASQSLATELGPQ 175

Query: 185 GIRVNCVSPYGLATGMSMKG---------GVDPALIESSMSQMGNLKGEFLKTDGIANAA 235
           GIRVN V+P G   G  +KG         GV    I +  +   +LK      D +A+A 
Sbjct: 176 GIRVNSVAP-GYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDLK-RLPTDDEVASAV 233

Query: 236 LYLASDESSYVSGQNLVVDGG 256
           L+LASD +  ++GQ L V+ G
Sbjct: 234 LFLASDLARAITGQTLDVNCG 254

Length = 258

>gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR

 Score =  121 bits (304), Expect = 5e-33
 Identities = 77/262 (29%), Positives = 129/262 (49%), Gaps = 31/262 (11%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQD----VCYIH 67
           R   KV I+TGG+ GIG   V  F ENGAKVV     +  G+ L  +L +       ++ 
Sbjct: 6   RYADKVVIVTGGSRGIGRGIVRAFVENGAKVVFCARGEAAGQALESELNRAGPGSCKFVP 65

Query: 68  CDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGF 127
           CD++ E+++  L+   V +FG++D + NNAG       +  +T   +   L+N+N I  F
Sbjct: 66  CDVTKEEDIKTLISVTVERFGRIDCLVNNAG-WHPPHQTTDETSAQEFRDLLNLNLISYF 124

Query: 128 LGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIR 187
           L +K+A   +  + +G I+  +S    I    +  Y  +K  I  + K LA +  +YG+R
Sbjct: 125 LASKYALPHL-RKSQGNIINLSSLVGSIGQKQAAPYVATKGAITAMTKALAVDESRYGVR 183

Query: 188 VNCVSPYGLATGM-------------SMKGGVDPALIESSMSQMGNLKGEFLKTDGIANA 234
           VNC+SP  + T +             ++K G    L+     +MG              A
Sbjct: 184 VNCISPGNIWTPLWEELAAQTPDTLATIKEGELAQLL----GRMG-------TEAESGLA 232

Query: 235 ALYLASDESSYVSGQNLVVDGG 256
           AL+LA+ E+++ +G +L++ GG
Sbjct: 233 ALFLAA-EATFCTGIDLLLSGG 253

These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score =  120 bits (302), Expect = 6e-33
 Identities = 80/243 (32%), Positives = 120/243 (49%), Gaps = 7/243 (2%)

Query: 17  VAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLAD---KLGQDVCYIHCDISNE 73
           VAI+TGGA+GIG        + GA VVIAD++ +  E +A    + G     + C++++E
Sbjct: 1   VAIVTGGAAGIGKAIAGTLAKAGASVVIADLKSEGAEAVAAAIQQAGGQAIGLECNVTSE 60

Query: 74  DEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHA 133
            ++  +V   VS+FG + I+ NNAG         +   + D E    +N    F  ++  
Sbjct: 61  QDLEAVVKATVSQFGGITILVNNAGGGGPKPFD-MPMTEEDFEWAFKLNLFSAFRLSQLC 119

Query: 134 ARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSP 193
           A  M     G IL  +S  +E   +   AY  SK  +  + + LA +LG  GIRVN V+P
Sbjct: 120 APHMQKAGGGAILNISSMSSENKNVRIAAYGSSKAAVNHMTRNLAFDLGPKGIRVNAVAP 179

Query: 194 YGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVV 253
             + T            IE +M +     G   + + IANAAL+L S  S++VSGQ L V
Sbjct: 180 GAVKTDALASVLTP--EIERAMLK-HTPLGRLGEPEDIANAALFLCSPASAWVSGQVLTV 236

Query: 254 DGG 256
            GG
Sbjct: 237 SGG 239

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated

 Score =  120 bits (303), Expect = 6e-33
 Identities = 83/263 (31%), Positives = 122/263 (46%), Gaps = 33/263 (12%)

Query: 18  AIITGGASGIGAMAVELFHENGAKVVIADVQDKLGED-LADKL----GQDVCY-IHCDIS 71
           A ITG A G+G        E GAKV + D+ D  G D  A ++    G+ V +    D++
Sbjct: 2   AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVT 61

Query: 72  NEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAK 131
           +E +   L+  A    G L ++ NNAG+   SFG+I      +  R++ +N    FLG K
Sbjct: 62  DEAQWQALLAQAADAMGGLSVLVNNAGV--GSFGAIEQIELDEWRRVMAINVESIFLGCK 119

Query: 132 HAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELG--QYGIRVN 189
           HA   +   Q   I+  +S     A     AY  SK  +  L K +A +       +R N
Sbjct: 120 HALPYLRASQPASIVNISSVAAFKAEPDYTAYNASKAAVASLTKSIALDCARRGLDVRCN 179

Query: 190 CVSPYGLATGMSMKGGVDPALIESSMSQ------------MGNLKGEFLKTDGIANAALY 237
            + P  + TG+     VDP  I   + +            +G L GE    D +A+A LY
Sbjct: 180 SIHPTFIRTGI-----VDP--IFQRLGEEEATRKLARGVPLGRL-GE---PDDVAHAVLY 228

Query: 238 LASDESSYVSGQNLVVDGGFSVV 260
           LASDES +V+G  LV+DGG   +
Sbjct: 229 LASDESRFVTGAELVIDGGICAM 251

Length = 251

>gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional

 Score =  119 bits (301), Expect = 1e-32
 Identities = 82/251 (32%), Positives = 126/251 (50%), Gaps = 15/251 (5%)

Query: 13  LEGKVAIITGGASGIGAMAVELFHENGAKVVI-----ADVQDKLGEDLADKLGQDVCYIH 67
           L  KVAI+TG + GIGA        +G  V +     A   D+L  ++    G+ +    
Sbjct: 3   LSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAV-Q 61

Query: 68  CDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGF 127
            D+++   V  L D A + FG++D++ NNAG++    G+I D    D +R I  N  G F
Sbjct: 62  ADVADAAAVTRLFDAAETAFGRIDVLVNNAGVM--PLGTIADFDLEDFDRTIATNLRGAF 119

Query: 128 LGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIR 187
           +  + AAR +   Q G I+  +++   +   G   Y  SK  + GLV  LA EL   GI 
Sbjct: 120 VVLREAARHL--GQGGRIINLSTSVIALPLPGYGPYAASKAAVEGLVHVLANELRGRGIT 177

Query: 188 VNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKT-DGIANAALYLASDESSYV 246
           VN V+P  +AT +    G     I+  ++ +  L  E L T + IA A  +LA  + ++V
Sbjct: 178 VNAVAPGPVATELFFN-GKSAEQID-QLAGLAPL--ERLGTPEEIAAAVAFLAGPDGAWV 233

Query: 247 SGQNLVVDGGF 257
           +GQ L V+GGF
Sbjct: 234 NGQVLRVNGGF 244

Length = 245

>gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated

 Score =  119 bits (301), Expect = 1e-32
 Identities = 90/248 (36%), Positives = 124/248 (50%), Gaps = 9/248 (3%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADK---LGQDVCYIHC 68
           RL+GK AIITG  +GIG      F   GA VV++D+       + D+   LG       C
Sbjct: 8   RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRC 67

Query: 69  DISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFL 128
           DI++E E+  L D A+SK GK+DI+ NNAG          D P +D  R   +N    F 
Sbjct: 68  DITSEQELSALADFALSKLGKVDILVNNAG---GGGPKPFDMPMADFRRAYELNVFSFFH 124

Query: 129 GAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRV 188
            ++  A  M     G IL   S   E   +   +Y  SK     LV+ +A +LG+  IRV
Sbjct: 125 LSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRV 184

Query: 189 NCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSG 248
           N ++P  + T  ++K  + P  IE  M Q   ++      D IANAAL+L S  +S+VSG
Sbjct: 185 NGIAPGAILTD-ALKSVITPE-IEQKMLQHTPIRRLGQPQD-IANAALFLCSPAASWVSG 241

Query: 249 QNLVVDGG 256
           Q L V GG
Sbjct: 242 QILTVSGG 249

Length = 255

>gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional

 Score =  118 bits (298), Expect = 2e-32
 Identities = 86/251 (34%), Positives = 134/251 (53%), Gaps = 13/251 (5%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIA-DVQDKLGEDLADKL---GQDVCYIH 67
           +L GKVAI+TGGA GIG        + GAKVVI  +   +  E+L ++L   G DV  + 
Sbjct: 3   QLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQ 62

Query: 68  CDISNEDEVINLVDTAVSKFGKLDIMYNNAGIL-DRSFGSILDTPKSDLERLINVNTIGG 126
            D+S  ++   LV+ AV+ FGK+DI+ NNAGI  DR+F  +    + D ER+I+VN    
Sbjct: 63  ADVSKVEDANRLVEEAVNHFGKVDILVNNAGITRDRTFKKL---NREDWERVIDVNLSSV 119

Query: 127 FLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGI 186
           F         +   ++G I+  +S   +  G G   Y+ +K G+LG  K LA EL +  +
Sbjct: 120 FNTTSAVLPYITEAEEGRIISISSIIGQAGGFGQTNYSAAKAGMLGFTKSLALELAKTNV 179

Query: 187 RVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYV 246
            VN + P  + T M  +  V   + +  ++++   K  F + D IA   +YL  D  +Y+
Sbjct: 180 TVNAICPGFIDTEMVAE--VPEEVRQKIVAKIP--KKRFGQADEIAKGVVYLCRD-GAYI 234

Query: 247 SGQNLVVDGGF 257
           +GQ L ++GG 
Sbjct: 235 TGQQLNINGGL 245

Length = 247

>gnl|CDD|171531 PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score =  118 bits (298), Expect = 3e-32
 Identities = 84/248 (33%), Positives = 133/248 (53%), Gaps = 8/248 (3%)

Query: 13  LEGKVAIITGGASGIG-AMAVELFHENGAKVVIADVQDK-LGEDLADKLGQDVCYIHCDI 70
           L GKVAIITG  +G+G  MA+ L  + GA +V   V +    +   + LG+   +I  D+
Sbjct: 6   LNGKVAIITGCNTGLGQGMAIGL-AKAGADIVGVGVAEAPETQAQVEALGRKFHFITADL 64

Query: 71  SNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGA 130
             + ++ ++V  AV   G +DI+ NNAGI+ R    +L+    D + +IN+N    F  +
Sbjct: 65  IQQKDIDSIVSQAVEVMGHIDILINNAGIIRRQ--DLLEFGNKDWDDVININQKTVFFLS 122

Query: 131 KHAARVMVPQQKGC-ILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVN 189
           +  A+  V Q  G  I+  AS  +   G+  P+YT SK  ++GL + LA EL QY I VN
Sbjct: 123 QAVAKQFVKQGNGGKIINIASMLSFQGGIRVPSYTASKSAVMGLTRALATELSQYNINVN 182

Query: 190 CVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQ 249
            ++P  +AT  +     D A  E+ + ++      +   D +A  A++L+S  S YV+G 
Sbjct: 183 AIAPGYMATDNTAALRADTARNEAILERIP--ASRWGTPDDLAGPAIFLSSSASDYVTGY 240

Query: 250 NLVVDGGF 257
            L VDGG+
Sbjct: 241 TLAVDGGW 248

Length = 251

>gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR

 Score =  118 bits (296), Expect = 5e-32
 Identities = 72/254 (28%), Positives = 116/254 (45%), Gaps = 14/254 (5%)

Query: 13  LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISN 72
           L+GK A+ITG A GIG    + +   GA+V IAD+  +     A ++G   C I  D+++
Sbjct: 1   LDGKTALITGSARGIGRAFAQAYVREGARVAIADINLEAARATAAEIGPAACAISLDVTD 60

Query: 73  EDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKH 132
           +  +   V   V ++G +DI+ NNA + D     I+D  +   +RL  +N  G     + 
Sbjct: 61  QASIDRCVAALVDRWGSIDILVNNAALFD--LAPIVDITRESYDRLFAINVSGTLFMMQA 118

Query: 133 AARVMVPQQKGC-ILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCV 191
            AR M+ Q +G  I+  AS            Y  +K  ++ L +     L ++GI VN +
Sbjct: 119 VARAMIAQGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGINVNAI 178

Query: 192 SPYGLATGMSMKGGVDPALIESSMSQMGNLK---------GEFLKTDGIANAALYLASDE 242
           +P G+  G     GVD           G  K         G   + + +   A++LAS +
Sbjct: 179 AP-GVVDG-EHWDGVDAKFARYENRPRGEKKRLVGEAVPFGRMGRAEDLTGMAIFLASTD 236

Query: 243 SSYVSGQNLVVDGG 256
           + Y+  Q   VDGG
Sbjct: 237 ADYIVAQTYNVDGG 250

This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254

>gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs

 Score =  117 bits (296), Expect = 5e-32
 Identities = 71/247 (28%), Positives = 116/247 (46%), Gaps = 10/247 (4%)

Query: 18  AIITGGASGIGAMAVELFHENGAKVVI-----ADVQDKLGEDLADKLGQDVCYIHCDISN 72
           A++TGG+ GIG        E GA VVI      D   ++  ++  +LG     +  D+S 
Sbjct: 1   ALVTGGSRGIGKAIALRLAERGADVVINYRKSKDAAAEVAAEIE-ELGGKAVVVRADVSQ 59

Query: 73  EDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKH 132
             +V  +      +FG+LD++ +NA     +F  + +   +  +  +N N       A+ 
Sbjct: 60  PQDVEEMFAAVKERFGRLDVLVSNAAA--GAFRPLSELTPAHWDAKMNTNLKALVHCAQQ 117

Query: 133 AARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVS 192
           AA++M  +  G I+  +S  +  A     A   +K  +  LV+ LA ELG  GIRVN VS
Sbjct: 118 AAKLMRERGGGRIVAISSLGSIRALPNYLAVGTAKAALEALVRYLAVELGPRGIRVNAVS 177

Query: 193 PYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLV 252
           P  + T           L+E++ +      G       +A+A  +L SD +  ++GQ LV
Sbjct: 178 PGVIDTDALAHFPNREDLLEAAAANTP--AGRVGTPQDVADAVGFLCSDAARMITGQTLV 235

Query: 253 VDGGFSV 259
           VDGG S+
Sbjct: 236 VDGGLSI 242

This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional

 Score =  118 bits (297), Expect = 6e-32
 Identities = 76/257 (29%), Positives = 131/257 (50%), Gaps = 21/257 (8%)

Query: 13  LEGKVAIITGGASGIGAMAVELFHENGAKVVIADV-QDKLGEDLAD--KLGQDVCYIHCD 69
           L+GK+A+ITG + GIG    + + + GA +V  D+ Q+ + + LA   +LG +     CD
Sbjct: 8   LKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCD 67

Query: 70  ISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLG 129
           +++ED V  +V     + G +DI+ NNAGI+ R    +L+    D  ++I+++    F+ 
Sbjct: 68  VTDEDGVQAMVSQIEKEVGVIDILVNNAGIIKRI--PMLEMSAEDFRQVIDIDLNAPFIV 125

Query: 130 AKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVN 189
           +K     M+ +  G I+   S  +E+      AY  +K G+  L K +A+E G+  I+ N
Sbjct: 126 SKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKGGLKMLTKNIASEYGEANIQCN 185

Query: 190 CVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFL----------KTDGIANAALYLA 239
            + P  +AT  +      P L E       +   +F+            + +A  A++LA
Sbjct: 186 GIGPGYIATPQT-----AP-LRELQADGSRHPFDQFIIAKTPAARWGDPEDLAGPAVFLA 239

Query: 240 SDESSYVSGQNLVVDGG 256
           SD S++V+G  L VDGG
Sbjct: 240 SDASNFVNGHILYVDGG 256

Length = 265

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score =  116 bits (293), Expect = 2e-31
 Identities = 82/265 (30%), Positives = 122/265 (46%), Gaps = 34/265 (12%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHC 68
            LEGK A++TGG  GIG   VE     GA+V       K  ++   +    G  V    C
Sbjct: 3   NLEGKTALVTGGTKGIGYAIVEELAGLGAEVYTCARNQKELDECLTEWREKGFKVEGSVC 62

Query: 69  DISNEDEVINLVDTAVSKF-GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGF 127
           D+S+  E   L+DT  S F GKL+I+ NNAG  +    +   T + D   +++ N    F
Sbjct: 63  DVSSRSERQELMDTVASHFGGKLNILVNNAGT-NIRKEAKDYTEE-DYSLIMSTN----F 116

Query: 128 LGAKHAARVMVP----QQKGCILFTASACTEIA-GLGSPAYTISKYGILGLVKCLAAELG 182
             A H +R+  P       G I+F +S    IA   G+P Y  +K  +  L + LA E  
Sbjct: 117 EAAYHLSRLAHPLLKASGNGNIVFISSVAGVIAVPSGAP-YGATKGALNQLTRSLACEWA 175

Query: 183 QYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLK--------GEFLKTDGIANA 234
           +  IRVN V+P+ +AT           L+E  + Q  NL           F + + +A  
Sbjct: 176 KDNIRVNAVAPWVIAT----------PLVEPVIQQKENLDKVIERTPLKRFGEPEEVAAL 225

Query: 235 ALYLASDESSYVSGQNLVVDGGFSV 259
             +L    +SY++GQ + VDGG + 
Sbjct: 226 VAFLCMPAASYITGQIIAVDGGLTA 250

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR

 Score =  116 bits (293), Expect = 2e-31
 Identities = 78/269 (28%), Positives = 119/269 (44%), Gaps = 40/269 (14%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHC 68
           R EGKV ++TG A GIG    E     GA+V++ D + +L  ++  ++   G        
Sbjct: 1   RFEGKVVVVTGAAQGIGRGVAERLAGEGARVLLVD-RSELVHEVLAEILAAGDAAHVHTA 59

Query: 69  DISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSIL-----DTPKSDLERLINVNT 123
           D+        +V  AV +FG++D++ NN G      G+I         +  +E  I  + 
Sbjct: 60  DLETYAGAQGVVRAAVERFGRVDVLINNVG------GTIWAKPYEHYEEEQIEAEIRRSL 113

Query: 124 IGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQ 183
                  +     M+ +Q+G I+  +S  T   G+    Y+ +K G+  L   LA E  +
Sbjct: 114 FPTLWCCRAVLPHMLERQQGVIVNVSSIATR--GIYRIPYSAAKGGVNALTASLAFEHAR 171

Query: 184 YGIRVNCVSPYGL----------ATGMS------MKGGVDPALIESSMSQMGNLKGEFLK 227
            GIRVN V+P G           A  MS       +  VD  L  S M + G +      
Sbjct: 172 DGIRVNAVAPGGTEAPPRKIPRNAAPMSEQEKVWYQRIVDQTLDSSLMGRYGTI------ 225

Query: 228 TDGIANAALYLASDESSYVSGQNLVVDGG 256
            D    A L+LASDE+SY++G  L V GG
Sbjct: 226 -DEQVRAILFLASDEASYITGTVLPVGGG 253

DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score =  116 bits (292), Expect = 3e-31
 Identities = 74/267 (27%), Positives = 124/267 (46%), Gaps = 32/267 (11%)

Query: 13  LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQD-----VCYIH 67
           L+GK  +ITG    IG+  V+   E G  V+ AD+  +   +L + LG++     +  + 
Sbjct: 2   LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVE 61

Query: 68  CDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFG-SILDTPKSDLERLINVNTIGG 126
            DI++++ +   +  +  K+GK+D   N A   ++ +G    D    D    ++++    
Sbjct: 62  LDITDQESLEEFLSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSS 121

Query: 127 FLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPA--------------YTISKYGILG 172
           FL ++  A+    Q  G ++  +S    I G+ +P               Y   K GI+ 
Sbjct: 122 FLFSQQFAKYFKKQGGGNLVNISS----IYGVVAPKFEIYEGTSMTSPVEYAAIKAGIIH 177

Query: 173 LVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIA 232
           L K LA       IRVNCVSP G+           P    ++  +  N KG  L  D I 
Sbjct: 178 LTKYLAKYFKDSNIRVNCVSPGGILDN-------QPEAFLNAYKKCCNGKG-MLDPDDIC 229

Query: 233 NAALYLASDESSYVSGQNLVVDGGFSV 259
              ++L SD+S Y++GQN++VD GFS+
Sbjct: 230 GTLVFLLSDQSKYITGQNIIVDDGFSL 256

Length = 256

>gnl|CDD|187583 cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehydrogenase (SDH), classical (c) SDRs

 Score =  116 bits (292), Expect = 3e-31
 Identities = 69/257 (26%), Positives = 120/257 (46%), Gaps = 17/257 (6%)

Query: 14  EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLAD----KLGQDVCYIHCD 69
             +VA++ GG   +G        E G  V +AD+  +  E +AD    + G+       D
Sbjct: 1   MNQVAVVIGGGQTLGEFLCHGLAEAGYDVAVADINSENAEKVADEINAEYGEKAYGFGAD 60

Query: 70  ISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLG 129
            +NE  VI L       F ++D++  +AGI   +   I D    D +R + VN +G FL 
Sbjct: 61  ATNEQSVIALSKGVDEIFKRVDLLVYSAGIAKSAK--ITDFELGDFDRSLQVNLVGYFLC 118

Query: 130 AKHAARVMVPQ-QKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRV 188
           A+  +++M+    +G I+   S   ++    +  Y+ +K+G +GL + LA +L ++GI V
Sbjct: 119 AREFSKLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDLAEHGITV 178

Query: 189 NCV-------SPY--GLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLA 239
           N +       SP    L    + K G+  + +E        LK        + N  L+ A
Sbjct: 179 NSLMLGNLLKSPMFQSLLPQYAKKLGIKESEVEQYYIDKVPLK-RGCDYQDVLNMLLFYA 237

Query: 240 SDESSYVSGQNLVVDGG 256
           S ++SY +GQ++ + GG
Sbjct: 238 SPKASYCTGQSINITGG 254

Sorbitol 6-phosphate dehydrogenase (SDH, aka glucitol 6-phosphate dehydrogenase) catalyzes the NAD-dependent interconversion of D-fructose 6-phosphate to D-sorbitol 6-phosphate. SDH is a member of the classical SDRs, with the characteristic catalytic tetrad, but without a complete match to the typical NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score =  115 bits (291), Expect = 5e-31
 Identities = 82/255 (32%), Positives = 119/255 (46%), Gaps = 30/255 (11%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAK-VVIADVQDKLGEDLAD---KLGQDVCYIH 67
           RL+GKVA++TGG  G+GA     F E GA  +VI     + GE  A     LG    ++ 
Sbjct: 3   RLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQ 62

Query: 68  CDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGF 127
            D+S+ ++   +V  A   FG+LD + N AG+ DR  G+ILDT     +R   VN    F
Sbjct: 63  ADLSDVEDCRRVVAAADEAFGRLDALVNAAGLTDR--GTILDTSPELFDRHFAVNVRAPF 120

Query: 128 LGAKHAARVMVPQQ-KGCILFTASACTEIAGLGSP---AYTISKYGILGLVKCLAAELGQ 183
              + A ++M  ++ +G I+   S     A  G P   AY  SK  +  L +  A  L +
Sbjct: 121 FLMQEAIKLMRRRKAEGTIVNIGSMS---AHGGQPFLAAYCASKGALATLTRNAAYALLR 177

Query: 184 YGIRVNCVSPYGLATG-MSMKG---------GVDPALIESSMSQMGNLKGEFLKTDGIAN 233
             IRVN     GL  G M+ +G         G     +E + +      G  L  D +A 
Sbjct: 178 NRIRVN-----GLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQP--FGRLLDPDEVAR 230

Query: 234 AALYLASDESSYVSG 248
           A  +L SDES  ++G
Sbjct: 231 AVAFLLSDESGLMTG 245

Length = 260

>gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional

 Score =  115 bits (290), Expect = 5e-31
 Identities = 74/263 (28%), Positives = 126/263 (47%), Gaps = 26/263 (9%)

Query: 13  LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCD 69
           L GK A++TG ASGIG          GA V IAD+       +AD++   G     +  D
Sbjct: 5   LNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMD 64

Query: 70  ISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLG 129
           ++NED V   +D    +FG +DI+ +NAGI  +    I +   +D +++  ++  G FL 
Sbjct: 65  VTNEDAVNAGIDKVAERFGSVDILVSNAGI--QIVNPIENYSFADWKKMQAIHVDGAFLT 122

Query: 130 AKHAARVMVPQQK-GCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRV 188
            K A + M    + G +++  S  +  A     AY  +K+G+LGL + LA E  ++ +R 
Sbjct: 123 TKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEGAKHNVRS 182

Query: 189 NCVSPYGLAT--------------GMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANA 234
           + V P  + T              G+S +  V   ++  ++       G F   + +A  
Sbjct: 183 HVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVD------GVFTTVEDVAQT 236

Query: 235 ALYLASDESSYVSGQNLVVDGGF 257
            L+L+S  S+ ++GQ+ VV  G+
Sbjct: 237 VLFLSSFPSAALTGQSFVVSHGW 259

Length = 262

>gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

 Score =  115 bits (289), Expect = 5e-31
 Identities = 79/262 (30%), Positives = 115/262 (43%), Gaps = 27/262 (10%)

Query: 13  LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCD 69
           L+ K AI+TGG  GIG      F E GAKV + D+  +  E +A  +   G +     CD
Sbjct: 1   LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACD 60

Query: 70  ISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLG 129
           I++ D V   V  A    G +D++ NNAG     FG    T     ERLI +N  G    
Sbjct: 61  ITDRDSVDTAVAAAEQALGPVDVLVNNAGW--DKFGPFTKTEPPLWERLIAINLTGALHM 118

Query: 130 AKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVN 189
                  MV +  G I+  AS    +   G   Y   K G++   K +A E  ++GI VN
Sbjct: 119 HHAVLPGMVERGAGRIVNIASDAARVGSSGEAVYAACKGGLVAFSKTMAREHARHGITVN 178

Query: 190 CVSPYGLATGMSMKGGVDPALIESSMSQMGNLK------------GEFLKTDGIANAALY 237
            V P          G  D AL++       N +            G   + D +  A L+
Sbjct: 179 VVCP----------GPTDTALLDDICGGAENPEKLREAFTRAIPLGRLGQPDDLPGAILF 228

Query: 238 LASDESSYVSGQNLVVDGGFSV 259
            +SD++S+++GQ L V GG ++
Sbjct: 229 FSSDDASFITGQVLSVSGGLTM 250

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score =  114 bits (288), Expect = 9e-31
 Identities = 65/256 (25%), Positives = 116/256 (45%), Gaps = 16/256 (6%)

Query: 15  GKVAIITGGASGIGAMAVELFHENGAKVVIA----DVQDKLGEDLADKLGQDVCYIHCDI 70
           GKVA++T  +SGIG          GA+V I     +  ++   +L       V  +  D+
Sbjct: 1   GKVALVTAASSGIGLAIARALAREGARVAICARNRENLERAASELRAGGAG-VLAVVADL 59

Query: 71  SNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGA 130
           ++ +++  LV+ A   FG++DI+ NNAG      G   +    D     ++  +      
Sbjct: 60  TDPEDIDRLVEKAGDAFGRVDILVNNAG--GPPPGPFAELTDEDWLEAFDLKLLSVIRIV 117

Query: 131 KHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNC 190
           +     M  +  G I+  +S   +          +++ G++GLVK L+ EL   G+ VN 
Sbjct: 118 RAVLPGMKERGWGRIVNISSLTVKEPEPNLVLSNVARAGLIGLVKTLSRELAPDGVTVNS 177

Query: 191 VSPYGLATG--------MSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDE 242
           V P  + T          + K G+     E  ++    L G   K + +A    +LAS++
Sbjct: 178 VLPGYIDTERVRRLLEARAEKEGISVEEAEKEVASQIPL-GRVGKPEELAALIAFLASEK 236

Query: 243 SSYVSGQNLVVDGGFS 258
           +SY++GQ ++VDGG +
Sbjct: 237 ASYITGQAILVDGGLT 252

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score =  114 bits (287), Expect = 1e-30
 Identities = 60/200 (30%), Positives = 97/200 (48%), Gaps = 16/200 (8%)

Query: 13  LEGKVAIITGGASGIGAMAVELFHENGAKVVI-ADVQDKLGEDLADKL----GQDVCYIH 67
           L+GKV IITG +SGIG          GA++V+ A  +++L E++  +           + 
Sbjct: 1   LQGKVVIITGASSGIGEELAYHLARLGARLVLSARREERL-EEVKSECLELGAPSPHVVP 59

Query: 68  CDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGF 127
            D+S+ ++   +V+ A+  FG LDI+ NNAGI  RS     DT      +++ VN    +
Sbjct: 60  LDMSDLEDAEQVVEEALKLFGGLDILINNAGISMRSL--FHDTSIDVDRKIMEVN----Y 113

Query: 128 LG----AKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQ 183
            G     K A   ++ + +G I+  +S   +I      AY  SK+ + G    L AEL +
Sbjct: 114 FGPVALTKAALPHLIERSQGSIVVVSSIAGKIGVPFRTAYAASKHALQGFFDSLRAELSE 173

Query: 184 YGIRVNCVSPYGLATGMSMK 203
             I V  V P  + T ++M 
Sbjct: 174 PNISVTVVCPGLIDTNIAMN 193

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR

 Score =  114 bits (287), Expect = 2e-30
 Identities = 73/268 (27%), Positives = 121/268 (45%), Gaps = 25/268 (9%)

Query: 13  LEGKVAIITGGASGIGAMAVELFHENGAKVVIADV-QDKLGEDLAD--KLGQDVCYIHCD 69
           L+ KVA+ITGG   +G        + GAKV      Q+K  +   +   LG     +  D
Sbjct: 3   LKNKVAVITGGTGVLGGAMARALAQAGAKVAALGRNQEKGDKVAKEITALGGRAIALAAD 62

Query: 70  ISNEDEVINLVDTAVSKFGKLDIMYNNAG------ILDRSF------GSILDTPKSDLER 117
           + +   +    +  V++FG +DI+ N AG        D          +  D  +   E 
Sbjct: 63  VLDRASLERAREEIVAQFGTVDILINGAGGNHPDATTDPEHYEPETEQNFFDLDEEGWEF 122

Query: 118 LINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCL 177
           + ++N  G FL ++   + M+ Q+ G I+  +S          PAY+ +K  +    + L
Sbjct: 123 VFDLNLNGSFLPSQVFGKDMLEQKGGSIINISSMNAFSPLTKVPAYSAAKAAVSNFTQWL 182

Query: 178 AAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNL------KGEFLKTDGI 231
           A E    G+RVN ++P    T  + K  ++P   + S +   N        G F K + +
Sbjct: 183 AVEFATTGVRVNAIAPGFFVTPQNRKLLINP---DGSYTDRSNKILGRTPMGRFGKPEEL 239

Query: 232 ANAALYLASDE-SSYVSGQNLVVDGGFS 258
             A L+LAS++ SS+V+G  + VDGGFS
Sbjct: 240 LGALLFLASEKASSFVTGVVIPVDGGFS 267

D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score =  113 bits (285), Expect = 2e-30
 Identities = 69/231 (29%), Positives = 111/231 (48%), Gaps = 14/231 (6%)

Query: 13  LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCD 69
           L+GKVA++TG +SGIG          GA V IA  +    E LAD+L   G     +  D
Sbjct: 1   LQGKVALVTGASSGIGEATARALAAEGAAVAIAARRVDRLEALADELEAEGGKALVLELD 60

Query: 70  ISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLG 129
           +++E +V   V+  V   G+LDI+ NNAGI+    G + D   +D  R+I+ N +G  + 
Sbjct: 61  VTDEQQVDAAVERTVEALGRLDILVNNAGIM--LLGPVEDADTTDWTRMIDTNLLG-LMY 117

Query: 130 AKHAA-RVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRV 188
             HAA    + + KG I+  +S    +A   S  Y  +K+G+    + L  E+ + G+RV
Sbjct: 118 TTHAALPHHLLRNKGTIVNISSVAGRVAVRNSAVYNATKFGVNAFSEGLRQEVTERGVRV 177

Query: 189 NCVSPYGLATGMS--MKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALY 237
             + P  + T +   +   +     E  +S +       L+ + IA A  Y
Sbjct: 178 VVIEPGTVDTELRDHITHTITKEAYEERISTI-----RKLQAEDIAAAVRY 223

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score =  113 bits (285), Expect = 2e-30
 Identities = 74/261 (28%), Positives = 112/261 (42%), Gaps = 35/261 (13%)

Query: 13  LEGKVAIITGGASGIGAMAVELFHENGAKVVIA---------DVQDKL------GEDLAD 57
           L GKVA +TG + GIG        + GA VV+A              L        +  +
Sbjct: 1   LSGKVAFVTGASRGIGRAIALRLAKAGATVVVAAKTASEGDNGSAKSLPGTIEETAEEIE 60

Query: 58  KLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLER 117
             G     I  D+ +ED+V  LV+  V +FG+LDI+ NNAG +      + DTP    + 
Sbjct: 61  AAGGQALPIVVDVRDEDQVRALVEATVDQFGRLDILVNNAGAIW--LSLVEDTPAKRFDL 118

Query: 118 LINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCL 177
           +  VN  G +L ++ A   MV   +G IL  +   +     G  AY   K G+  L   L
Sbjct: 119 MQRVNLRGTYLLSQAALPHMVKAGQGHILNISPPLSLRPARGDVAYAAGKAGMSRLTLGL 178

Query: 178 AAELGQYGIRVNCVSPYGLAT---GMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANA 234
           AAEL ++GI VN + P           + GG DPA                   + +++A
Sbjct: 179 AAELRRHGIAVNSLWPSTAIETPAATELSGGSDPARAR--------------SPEILSDA 224

Query: 235 ALYLASDESSYVSGQNLVVDG 255
            L + S  ++  +G  +V+D 
Sbjct: 225 VLAILSRPAAERTG-LVVIDE 244

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs

 Score =  113 bits (284), Expect = 3e-30
 Identities = 73/245 (29%), Positives = 110/245 (44%), Gaps = 12/245 (4%)

Query: 18  AIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVI 77
            I+TG A GIG        + GA V+  D+       L  + G  +     D+++   V 
Sbjct: 1   VIVTGAAQGIGRAVARHLLQAGATVIALDLP----FVLLLEYGDPLRLTPLDVADAAAVR 56

Query: 78  NLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVM 137
            +    +++ G +D + N AG+L    G+       D E+   VN  G F   +  A  M
Sbjct: 57  EVCSRLLAEHGPIDALVNCAGVL--RPGATDPLSTEDWEQTFAVNVTGVFNLLQAVAPHM 114

Query: 138 VPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLA 197
             ++ G I+  AS    +  +   AY  SK  +  L KCL  EL  YG+R N VSP    
Sbjct: 115 KDRRTGAIVTVASNAAHVPRISMAAYGASKAALASLSKCLGLELAPYGVRCNVVSPGSTD 174

Query: 198 TGMSMKGGVDP----ALIESSMSQ--MGNLKGEFLKTDGIANAALYLASDESSYVSGQNL 251
           T M      D      +I     Q  +G   G+  +   IANA L+LASD++ +++  +L
Sbjct: 175 TAMQRTLWHDEDGAAQVIAGVPEQFRLGIPLGKIAQPADIANAVLFLASDQAGHITMHDL 234

Query: 252 VVDGG 256
           VVDGG
Sbjct: 235 VVDGG 239

2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR

 Score =  112 bits (283), Expect = 5e-30
 Identities = 79/258 (30%), Positives = 112/258 (43%), Gaps = 21/258 (8%)

Query: 17  VAIITGGASGIG-AMAVELFHENGAKVVIADVQ-DKLGEDLAD--KLGQDVCYIHCDISN 72
           VAI+TG + GIG A+A EL        +      D+  E +A+    G+   Y   DI  
Sbjct: 3   VAIVTGASRGIGRAIATELAARGFDIAINDLPDDDQATEVVAEVLAAGRRAIYFQADIGE 62

Query: 73  EDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKH 132
             +   L+D A   FG+LD + NNAGI  R  G +LD  +   +RLI +N  G F   + 
Sbjct: 63  LSDHEALLDQAWEDFGRLDCLVNNAGIAVRPRGDLLDLTEDSFDRLIAINLRGPFFLTQA 122

Query: 133 AARVMVPQQK------GCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGI 186
            AR MV Q          I+F  S    +       Y ISK G+    + LA  L   GI
Sbjct: 123 VARRMVEQPDRFDGPHRSIIFVTSINAYLVSPNRGEYCISKAGLSMATRLLAYRLADEGI 182

Query: 187 RVNCVSPYGLATGMSMKGG-VDPALIESSM---SQMGNLKGEFLKTDGIANAALYLASDE 242
            V+ + P  + T M+         LI + +    + G         + IA A   LAS  
Sbjct: 183 AVHEIRPGLIHTDMTAPVKEKYDELIAAGLVPIRRWGQ-------PEDIAKAVRTLASGL 235

Query: 243 SSYVSGQNLVVDGGFSVV 260
             Y +GQ + +DGG S+ 
Sbjct: 236 LPYSTGQPINIDGGLSMR 253

This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255

>gnl|CDD|187641 cd08936, CR_SDR_c, Porcine peroxisomal carbonyl reductase like, classical (c) SDR

 Score =  111 bits (280), Expect = 1e-29
 Identities = 76/252 (30%), Positives = 125/252 (49%), Gaps = 12/252 (4%)

Query: 11  KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQ----DKLGEDLADKLGQDVCYI 66
             L  KVA++T    GIG        ++GA VV++  +    D+    L  + G  V   
Sbjct: 6   DPLANKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQQNVDRAVATLQGE-GLSVTGT 64

Query: 67  HCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGG 126
            C +   ++   LV TAV+  G +DI+ +NA + +  FG+ILD+ +   +++++VN    
Sbjct: 65  VCHVGKAEDRERLVATAVNLHGGVDILVSNAAV-NPFFGNILDSTEEVWDKILDVNVKAT 123

Query: 127 FLGAKHAARVMVPQQKGCILFTAS--ACTEIAGLGSPAYTISKYGILGLVKCLAAELGQY 184
            L  K     M  +  G ++  +S  A     GLG   Y +SK  +LGL K LA EL   
Sbjct: 124 ALMTKAVVPEMEKRGGGSVVIVSSVAAFHPFPGLGP--YNVSKTALLGLTKNLAPELAPR 181

Query: 185 GIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESS 244
            IRVNC++P  + T  S    +D A+ ES    +   +    + +  A    +L S+++S
Sbjct: 182 NIRVNCLAPGLIKTSFSSALWMDKAVEESMKETLRIRR--LGQPEDCAGIVSFLCSEDAS 239

Query: 245 YVSGQNLVVDGG 256
           Y++G+ +VV GG
Sbjct: 240 YITGETVVVGGG 251

This subgroup contains porcine peroxisomal carbonyl reductase and similar proteins. The porcine enzyme efficiently reduces retinals. This subgroup also includes human dehydrogenase/reductase (SDR family) member 4 (DHRS4), and human DHRS4L1. DHRS4 is a peroxisomal enzyme with 3beta-hydroxysteroid dehydrogenase activity; it catalyzes the reduction of 3-keto-C19/C21-steroids into 3beta-hydroxysteroids more efficiently than it does the retinal reduction. The human DHRS4 gene cluster contains DHRS4, DHRS4L2 and DHRS4L1. DHRS4L2 and DHRS4L1 are paralogs of DHRS4, DHRS4L2 being the most recent member. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional

 Score =  112 bits (281), Expect = 1e-29
 Identities = 81/257 (31%), Positives = 134/257 (52%), Gaps = 12/257 (4%)

Query: 4   PSSAAPFKRLEGKVAIITGGA-SGIGAMAVELFHENGAKVVIADVQDK-LGE---DLADK 58
           P        L GKV ++T  A +GIG+       E GA+VVI+D+ ++ LGE   +LA +
Sbjct: 6   PKYVPGHGLLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAE 65

Query: 59  LGQD-VCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLER 117
           LG   V  + CD+++E +V  L+D AV + G+LD++ NNAG+  ++   ++D    +  R
Sbjct: 66  LGLGRVEAVVCDVTSEAQVDALIDAAVERLGRLDVLVNNAGLGGQT--PVVDMTDDEWSR 123

Query: 118 LINVNTIGGFLGAKHAARVMVPQ-QKGCILFTASACTEIAGLGSPAYTISKYGILGLVKC 176
           +++V   G F   + A R M  +   G I+  AS     A  G   Y  +K G++ L +C
Sbjct: 124 VLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQHGQAHYAAAKAGVMALTRC 183

Query: 177 LAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAAL 236
            A E  +YG+R+N V+P  +A    +       L++   +      G   +   +AN   
Sbjct: 184 SALEAAEYGVRINAVAP-SIAMHPFLAKVTSAELLDELAA--REAFGRAAEPWEVANVIA 240

Query: 237 YLASDESSYVSGQNLVV 253
           +LASD SSY++G+ + V
Sbjct: 241 FLASDYSSYLTGEVVSV 257

Length = 262

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score =  111 bits (279), Expect = 2e-29
 Identities = 61/189 (32%), Positives = 92/189 (48%), Gaps = 5/189 (2%)

Query: 13  LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQD--VCYIHCDI 70
           L+GKVA+ITGG+ GIG    E     G KV I     K  E+ A +L     V  +  D+
Sbjct: 4   LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADV 63

Query: 71  SNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGA 130
            +E +V   VD  V+ FG LD++  NAG+    F  + +    +   +I+ N  G F   
Sbjct: 64  RDEADVQRAVDAIVAAFGGLDVLIANAGV--GHFAPVEELTPEEWRLVIDTNLTGAFYTI 121

Query: 131 KHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNC 190
           K A   +  +  G I+  +S        G  AY  SK+G++G  +    +L QYGI+V+ 
Sbjct: 122 KAAVPAL-KRGGGYIINISSLAGTNFFAGGAAYNASKFGLVGFSEAAMLDLRQYGIKVST 180

Query: 191 VSPYGLATG 199
           + P  +AT 
Sbjct: 181 IMPGSVATH 189

Length = 237

>gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional

 Score =  109 bits (275), Expect = 7e-29
 Identities = 71/248 (28%), Positives = 117/248 (47%), Gaps = 17/248 (6%)

Query: 16  KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQD-VCYIHCDISNED 74
           + A++TG A GIG      F   G +V+  D+        AD LG      + CD+++  
Sbjct: 3   RTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAA 62

Query: 75  EVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAA 134
            +   +  A ++ G +D++  NAG   R+  S+ DT  +       +N    +L  +   
Sbjct: 63  SLAAALANAAAERGPVDVLVANAGAA-RAA-SLHDTTPASWRADNALNLEAAYLCVEAVL 120

Query: 135 RVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPY 194
             M+ + +G ++   S    +A LG PAY+ +K G++   K LA E G++GIR N V+P 
Sbjct: 121 EGMLKRSRGAVVNIGSV-NGMAALGHPAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPG 179

Query: 195 GLAT-GMSMKGGVDPALIESSMSQMGNLK-----GEFLKTDGIANAALYLASDESSYVSG 248
            + T     +   +P + E        LK      +F   D +ANA L+LAS  +  ++G
Sbjct: 180 TVKTQAWEARVAANPQVFE-------ELKKWYPLQDFATPDDVANAVLFLASPAARAITG 232

Query: 249 QNLVVDGG 256
             L VDGG
Sbjct: 233 VCLPVDGG 240

Length = 257

>gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional

 Score =  109 bits (276), Expect = 1e-28
 Identities = 78/272 (28%), Positives = 125/272 (45%), Gaps = 32/272 (11%)

Query: 13  LEGKVAIITGGASGI--GAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIH 67
           L+GKVA+ITGG  G+  GAMA EL    GAKV I D   +  E +  ++   G +   + 
Sbjct: 8   LKGKVAVITGG-GGVLGGAMAKELARA-GAKVAILDRNQEKAEAVVAEIKAAGGEALAVK 65

Query: 68  CDISNEDEVINLVDTAVSKFGKLDIMYNNAG-------------ILDRSFGSILDTPKSD 114
            D+ +++ +       +  FG  DI+ N AG              L     +  D  +  
Sbjct: 66  ADVLDKESLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEG 125

Query: 115 LERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLV 174
            E + ++N +G  L  +  A+ MV ++ G I+  +S          PAY+ +K  I    
Sbjct: 126 FEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFTPLTKVPAYSAAKAAISNFT 185

Query: 175 KCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLK-------GEFLK 227
           + LA    + GIRVN ++P    T  +     +    + S+++  N K       G F K
Sbjct: 186 QWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNE---DGSLTERAN-KILAHTPMGRFGK 241

Query: 228 TDGIANAALYLASDE-SSYVSGQNLVVDGGFS 258
            + +    L+LA ++ SS+V+G  L VDGGFS
Sbjct: 242 PEELLGTLLWLADEKASSFVTGVVLPVDGGFS 273

Length = 278

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score =  108 bits (271), Expect = 2e-28
 Identities = 53/186 (28%), Positives = 84/186 (45%), Gaps = 2/186 (1%)

Query: 16  KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDE 75
           K A++TG + GIG     L H  G +V I    +      A +  + V  +  D+ +E +
Sbjct: 1   KAALVTGASRGIGEATARLLHAEGYRVGICARDEARLAAAAAQELEGVLGLAGDVRDEAD 60

Query: 76  VINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAAR 135
           V   VD     FG LD + NNAG+       + +    +   +++ N  G F     AA 
Sbjct: 61  VRRAVDAMEEAFGGLDALVNNAGV--GVMKPVEELTPEEWRLVLDTNLTGAFYCIHKAAP 118

Query: 136 VMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYG 195
            ++ +  G I+   S   + A  G  AY  SK+G+LGL +    +L +  IRV  V P  
Sbjct: 119 ALLRRGGGTIVNVGSLAGKNAFKGGAAYNASKFGLLGLSEAAMLDLREANIRVVNVMPGS 178

Query: 196 LATGMS 201
           + TG +
Sbjct: 179 VDTGFA 184

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score =  108 bits (272), Expect = 2e-28
 Identities = 74/250 (29%), Positives = 121/250 (48%), Gaps = 14/250 (5%)

Query: 13  LEGKVAIITGGASGIGAMAVELFHENGAKVV-IADVQDKLGEDLADKLG-QDVCYIHCDI 70
             GK A++TG   GIG   V+   + GA+VV ++  Q  L   + +  G + VC    D+
Sbjct: 5   FAGKRALVTGAGKGIGRATVKALAKAGARVVAVSRTQADLDSLVRECPGIEPVC---VDL 61

Query: 71  SNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGA 130
           S+ D      + A+   G +D++ NNA +        L+  K   +R  +VN       +
Sbjct: 62  SDWDAT----EEALGSVGPVDLLVNNAAVA--ILQPFLEVTKEAFDRSFDVNVRAVIHVS 115

Query: 131 KHAARVMVPQQ-KGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVN 189
           +  AR M+ +   G I+  +S  ++ A      Y  +K  +  L K +A ELG + IRVN
Sbjct: 116 QIVARGMIARGVPGSIVNVSSQASQRALTNHTVYCSTKAALDMLTKVMALELGPHKIRVN 175

Query: 190 CVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQ 249
            V+P  + T M      DP   +  ++++    G+F + + + NA L+L SD+SS  +G 
Sbjct: 176 SVNPTVVMTDMGRDNWSDPEKAKKMLNRIP--LGKFAEVEDVVNAILFLLSDKSSMTTGS 233

Query: 250 NLVVDGGFSV 259
            L VDGGF  
Sbjct: 234 TLPVDGGFLA 243

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional

 Score =  108 bits (272), Expect = 2e-28
 Identities = 77/252 (30%), Positives = 122/252 (48%), Gaps = 18/252 (7%)

Query: 16  KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL-------GQDVCYIHC 68
           KV IITG + GIGA    L  E G  V +  ++++   D A+ +       G +   +  
Sbjct: 3   KVMIITGASRGIGAATALLAAERGYAVCLNYLRNR---DAAEAVVQAIRRQGGEALAVAA 59

Query: 69  DISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFL 128
           D+++E +V+ L +    + G+LD + NNAGIL+     +     + L R+   N +G FL
Sbjct: 60  DVADEADVLRLFEAVDRELGRLDALVNNAGILEAQM-RLEQMDAARLTRIFATNVVGSFL 118

Query: 129 GAKHAARVMVPQQKGCILFTASACTEIAGLGSPA----YTISKYGILGLVKCLAAELGQY 184
            A+ A + M  +  G      +  +  A LGSP     Y  SK  I  +   LA E+   
Sbjct: 119 CAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGEYIDYAASKGAIDTMTIGLAKEVAAE 178

Query: 185 GIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESS 244
           GIRVN V P  + T +   GG +P  ++   + +   +G     + +A A L+L SDE+S
Sbjct: 179 GIRVNAVRPGVIYTEIHASGG-EPGRVDRVKAGIPMGRGG--TAEEVARAILWLLSDEAS 235

Query: 245 YVSGQNLVVDGG 256
           Y +G  + V GG
Sbjct: 236 YTTGTFIDVSGG 247

Length = 248

>gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional

 Score =  109 bits (275), Expect = 2e-28
 Identities = 90/282 (31%), Positives = 128/282 (45%), Gaps = 50/282 (17%)

Query: 4   PSSAAPF----KRLEGKVAIITGGASGIG-AMAVELFHENGAKVVIADVQDKLGEDLAD- 57
           P   AP      +L+GKVA+ITGG SGIG A+AV LF + GA + I  + +   ED  + 
Sbjct: 31  PQFEAPNYKGSGKLKGKVALITGGDSGIGRAVAV-LFAKEGADIAIVYLDEH--EDANET 87

Query: 58  -----KLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPK 112
                K G     I  D+S+E    + V+  V + G+LDI+ NNA        S+ D   
Sbjct: 88  KQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELGRLDILVNNAAFQYPQ-QSLEDITA 146

Query: 113 SDLERLINVNTIGGFLGAKHAARVMVPQQK--GCILFTASACTEIAGL-GSPA---YTIS 166
             L++    N    F    H  +  +P  K    I+ T S    I G  G+     Y+ +
Sbjct: 147 EQLDKTFKTNIYSYF----HMTKAALPHLKQGSAIINTGS----ITGYEGNETLIDYSAT 198

Query: 167 KYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEF- 225
           K  I    + LA  L Q GIRVN V+P          G +   LI S          +F 
Sbjct: 199 KGAIHAFTRSLAQSLVQKGIRVNAVAP----------GPIWTPLIPSDFD--EEKVSQFG 246

Query: 226 ----LKTDG----IANAALYLASDESSYVSGQNLVVDGGFSV 259
               ++  G    +A A ++LAS +SSY++GQ L V+GG  V
Sbjct: 247 SNTPMQRPGQPEELAPAYVFLASPDSSYITGQMLHVNGGVIV 288

Length = 290

>gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional

 Score =  109 bits (275), Expect = 2e-28
 Identities = 58/182 (31%), Positives = 89/182 (48%), Gaps = 11/182 (6%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQD--VCYIHCD 69
            L GKV ++TG A GIGA      H  GAK+ + D+++     LA +LG D  V  +  D
Sbjct: 6   SLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVAD 65

Query: 70  ISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLG 129
           +++   +    + AV +FG +D++  NAGI   S GS+         R+I+VN +G F  
Sbjct: 66  VTDLAAMQAAAEEAVERFGGIDVVVANAGIA--SGGSVAQVDPDAFRRVIDVNLLGVF-- 121

Query: 130 AKHAARVMVPQ---QKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGI 186
             H  R  +P    ++G +L  +S     A  G  AY  SK G+      L  E+  +G+
Sbjct: 122 --HTVRATLPALIERRGYVLQVSSLAAFAAAPGMAAYCASKAGVEAFANALRLEVAHHGV 179

Query: 187 RV 188
            V
Sbjct: 180 TV 181

Length = 296

>gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

 Score =  108 bits (270), Expect = 3e-28
 Identities = 75/251 (29%), Positives = 120/251 (47%), Gaps = 12/251 (4%)

Query: 13  LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISN 72
           L G+ A++TG + GIG     L H  GA V +   + +  E LA +LG+ V     ++S+
Sbjct: 4   LSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSD 63

Query: 73  EDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKH 132
            DEV  L   A +    +DI+ NNAGI     G  +     D + ++ VN    F   + 
Sbjct: 64  RDEVKALGQKAEADLEGVDILVNNAGITKD--GLFVRMSDEDWDSVLEVNLTATFRLTRE 121

Query: 133 AARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVS 192
               M+ ++ G I+   S        G   Y  SK G++G  K LA E+    + VNCV+
Sbjct: 122 LTHPMMRRRYGRIINITSVVGVTGNPGQANYCASKAGMIGFSKSLAQEIATRNVTVNCVA 181

Query: 193 PYGLATGMSMK---GGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQ 249
           P  + + M+ K      +  +    M +MG           +A+A  YLAS E++YV+GQ
Sbjct: 182 PGFIESAMTGKLNDKQKEAIMGAIPMKRMGT-------GAEVASAVAYLASSEAAYVTGQ 234

Query: 250 NLVVDGGFSVV 260
            + V+GG +++
Sbjct: 235 TIHVNGGMAMI 245

Length = 245

>gnl|CDD|181605 PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrogenase; Validated

 Score =  107 bits (268), Expect = 7e-28
 Identities = 71/247 (28%), Positives = 128/247 (51%), Gaps = 6/247 (2%)

Query: 13  LEGKVAIITGGASGIG-AMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDIS 71
           LEGKVA++TG  +G+G  MA+ L       V I  V+     +    LG+    +  D+ 
Sbjct: 8   LEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLR 67

Query: 72  NEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAK 131
             D +  L++ AV++FG +DI+ NNAG++ R     ++  + D + ++N+N    F  ++
Sbjct: 68  KIDGIPALLERAVAEFGHIDILVNNAGLIRRE--DAIEFSEKDWDDVMNLNIKSVFFMSQ 125

Query: 132 HAARVMVPQQKGC-ILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNC 190
            AA+  + Q  G  I+  AS  +   G+  P+YT SK G++G+ + +A E  ++ I VN 
Sbjct: 126 AAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTASKSGVMGVTRLMANEWAKHNINVNA 185

Query: 191 VSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQN 250
           ++P  +AT  + +   D       + ++    G +     +    ++LAS  S Y++G  
Sbjct: 186 IAPGYMATNNTQQLRADEQRSAEILDRIP--AGRWGLPSDLMGPVVFLASSASDYINGYT 243

Query: 251 LVVDGGF 257
           + VDGG+
Sbjct: 244 IAVDGGW 250

Length = 253

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  106 bits (266), Expect = 1e-27
 Identities = 60/193 (31%), Positives = 107/193 (55%), Gaps = 7/193 (3%)

Query: 13  LEGKVAIITGGASGIG-AMAVELFHENGAKVVIADVQDKLGEDLADKLGQ---DVCYIHC 68
           L+GK A+ITG   GIG A+A+ L  E     ++A  ++ L + +A+++      V     
Sbjct: 5   LQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENL-KAVAEEVEAYGVKVVIATA 63

Query: 69  DISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFL 128
           D+S+ +EV   ++   ++ G +DI+ NNAGI    FG  L+   ++ E++I VN +G + 
Sbjct: 64  DVSDYEEVTAAIEQLKNELGSIDILINNAGI--SKFGKFLELDPAEWEKIIQVNLMGVYY 121

Query: 129 GAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRV 188
             +     M+ +Q G I+  +S   +     + AY+ SK+G+LGL + L  E+ ++ IRV
Sbjct: 122 ATRAVLPSMIERQSGDIINISSTAGQKGAAVTSAYSASKFGVLGLTESLMQEVRKHNIRV 181

Query: 189 NCVSPYGLATGMS 201
             ++P  +AT M+
Sbjct: 182 TALTPSTVATDMA 194

Length = 239

>gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  106 bits (266), Expect = 1e-27
 Identities = 79/254 (31%), Positives = 121/254 (47%), Gaps = 15/254 (5%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDK-LGEDLADKLGQDVCYIHCDI 70
           ++  +  ++TGG+ G+GA     F   GA+VV+   Q +   E LAD+LG     +  D+
Sbjct: 2   QISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADV 61

Query: 71  SNEDEVINLVDTAVSKFGK-LDIMYNNAGILDRSF-GSILDTPKS----DLERLINVNTI 124
           ++ ++V  +  TA   FGK +  + NNA + D SF G            D ++ +  +  
Sbjct: 62  TDREQVQAMFATATEHFGKPITTVVNNA-LADFSFDGDARKKADDITWEDFQQQLEGSVK 120

Query: 125 GGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQY 184
           G     + A   M  Q  G I+   +   +   +    YT +K  +LGL + LAAELG Y
Sbjct: 121 GALNTIQAALPGMREQGFGRIINIGTNLFQNPVVPYHDYTTAKAALLGLTRNLAAELGPY 180

Query: 185 GIRVNCVSPYGL--ATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDE 242
           GI VN VS  GL   T  S      P  +   ++    L+      +  A+A L+ AS  
Sbjct: 181 GITVNMVSG-GLLRTTDAS---AATPDEVFDLIAATTPLRKVTTPQE-FADAVLFFASPW 235

Query: 243 SSYVSGQNLVVDGG 256
           +  V+GQNLVVDGG
Sbjct: 236 ARAVTGQNLVVDGG 249

Length = 253

>gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated

 Score =  104 bits (261), Expect = 9e-27
 Identities = 70/258 (27%), Positives = 119/258 (46%), Gaps = 21/258 (8%)

Query: 14  EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDI 70
             KVA++TG   GIG    +   E+G KV I D  ++  +  ADKL   G     +  D+
Sbjct: 1   MSKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADV 60

Query: 71  SNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGA 130
           S+ D+V   V   V  FG L+++ NNAG+   +   I    +   +++ N+N  G   G 
Sbjct: 61  SDRDQVFAAVRQVVDTFGDLNVVVNNAGVAPTT--PIETITEEQFDKVYNINVGGVIWGI 118

Query: 131 KHAARVMVPQQKGCILFTASACTEIAGLGSPA---YTISKYGILGLVKCLAAELGQYGIR 187
           + A         G  +   +A ++   +G+P    Y+ +K+ + GL +  A +L   GI 
Sbjct: 119 QAAQEAFKKLGHGGKII--NATSQAGVVGNPELAVYSSTKFAVRGLTQTAARDLASEGIT 176

Query: 188 VNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKT---------DGIANAALYL 238
           VN  +P  + T M     +   + E++         +F K          + +AN   +L
Sbjct: 177 VNAYAPGIVKTPMMF--DIAHQVGENAGKPDEWGMEQFAKDITLGRLSEPEDVANCVSFL 234

Query: 239 ASDESSYVSGQNLVVDGG 256
           A  +S Y++GQ ++VDGG
Sbjct: 235 AGPDSDYITGQTIIVDGG 252

Length = 256

>gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional

 Score =  103 bits (259), Expect = 1e-26
 Identities = 85/253 (33%), Positives = 122/253 (48%), Gaps = 20/253 (7%)

Query: 16  KVAIITGGASGIGAMAVELFHENGAKVVIADVQD----KLGEDLADKLGQDVCYIHCDIS 71
           KV +ITG + GIG     L    G  V I   +D    +   D     G   C +  D++
Sbjct: 3   KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVA 62

Query: 72  NEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAK 131
           NE +VI + D   S FG+LD + NNAGI+  S   + D   + L R+ + N +G +L A+
Sbjct: 63  NEADVIAMFDAVQSAFGRLDALVNNAGIVAPSM-PLADMDAARLRRMFDTNVLGAYLCAR 121

Query: 132 HAARVMVPQQ---KGCILFTASACTEIAGLGSPA----YTISKYGILGLVKCLAAELGQY 184
            AAR +   +    G I+  +S     + LGSP     Y  SK  +  L   LA ELG +
Sbjct: 122 EAARRLSTDRGGRGGAIVNVSSIA---SRLGSPNEYVDYAGSKGAVDTLTLGLAKELGPH 178

Query: 185 GIRVNCVSPYGLATGMSMKGGV-DPALIESSMSQMGNLKGEFLKTDGIANAALYLASDES 243
           G+RVN V P  + T +   GG    A    + + +G   GE    D +A   ++L SD +
Sbjct: 179 GVRVNAVRPGLIETEIHASGGQPGRAARLGAQTPLGR-AGE---ADEVAETIVWLLSDAA 234

Query: 244 SYVSGQNLVVDGG 256
           SYV+G  L V GG
Sbjct: 235 SYVTGALLDVGGG 247

Length = 248

>gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

 Score =  103 bits (260), Expect = 1e-26
 Identities = 80/271 (29%), Positives = 119/271 (43%), Gaps = 42/271 (15%)

Query: 11  KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIH 67
           +R  GKV ++TG A GIG          GA+VV+ D  + L  ++A +L   G +   + 
Sbjct: 4   QRFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSE-LVHEVAAELRAAGGEALALT 62

Query: 68  CDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTP-----KSDLERLINVN 122
            D+         +  AV  FG++D++ NN G      G+I   P     +  +E  I   
Sbjct: 63  ADLETYAGAQAAMAAAVEAFGRIDVLINNVG------GTIWAKPFEEYEEEQIEAEIR-R 115

Query: 123 TIGGFLGAKHAA-RVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAEL 181
           ++   L    A    M+ Q  G I+  +S  T   G+    Y+ +K G+  L   LA E 
Sbjct: 116 SLFPTLWCCRAVLPHMLAQGGGAIVNVSSIAT--RGINRVPYSAAKGGVNALTASLAFEY 173

Query: 182 GQYGIRVNCVSPYGL----------ATGMS------MKGGVDPALIESSMSQMGNLKGEF 225
            ++GIRVN V+P G           A   S       +  VD  L  S M + G +    
Sbjct: 174 AEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMKRYGTI---- 229

Query: 226 LKTDGIANAALYLASDESSYVSGQNLVVDGG 256
              D    A L+LASDE+SY++G  L V GG
Sbjct: 230 ---DEQVAAILFLASDEASYITGTVLPVGGG 257

Length = 260

>gnl|CDD|168204 PRK05717, PRK05717, oxidoreductase; Validated

 Score =  103 bits (259), Expect = 1e-26
 Identities = 81/245 (33%), Positives = 125/245 (51%), Gaps = 7/245 (2%)

Query: 15  GKVAIITGGASGIG-AMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNE 73
           G+VA++TG A GIG  +A  L  E G +VV+AD+  + G  +A  LG++  +I  D+++E
Sbjct: 10  GRVALVTGAARGIGLGIAAWLIAE-GWQVVLADLDRERGSKVAKALGENAWFIAMDVADE 68

Query: 74  DEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHA 133
            +V   V   + +FG+LD +  NA I D    ++     +   R++ VN  G  L AKH 
Sbjct: 69  AQVAAGVAEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHC 128

Query: 134 ARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSP 193
           A  +     G I+  AS     +   + AY  SK G+L L   LA  LG   IRVN VSP
Sbjct: 129 APYL-RAHNGAIVNLASTRARQSEPDTEAYAASKGGLLALTHALAISLGP-EIRVNAVSP 186

Query: 194 YGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVV 253
             +      +   +P L E+  +Q  +  G     + +A    +L S ++ +V+GQ  VV
Sbjct: 187 GWIDARDPSQRRAEP-LSEADHAQ--HPAGRVGTVEDVAAMVAWLLSRQAGFVTGQEFVV 243

Query: 254 DGGFS 258
           DGG +
Sbjct: 244 DGGMT 248

Length = 255

>gnl|CDD|187631 cd05373, SDR_c10, classical (c) SDR, subgroup 10

 Score =  103 bits (258), Expect = 2e-26
 Identities = 66/228 (28%), Positives = 99/228 (43%), Gaps = 17/228 (7%)

Query: 17  VAIITGGASGIGAMAVELFHENGAKVVIA----DVQDKLGEDLADKLGQDVCYIHCDISN 72
           VA + G   G+GA     F   G  V +A       + L  D+    G     +  D  +
Sbjct: 1   VAAVVGAGDGLGAAIARRFAAEGFSVALAARREAKLEALLVDIIRDAGGSAKAVPTDARD 60

Query: 73  EDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKH 132
           EDEVI L D    + G L+++  NAG     +  IL+T     E++  +   GGFL A+ 
Sbjct: 61  EDEVIALFDLIEEEIGPLEVLVYNAG--ANVWFPILETTPRVFEKVWEMAAFGGFLAARE 118

Query: 133 AARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVS 192
           AA+ M+ + +G I+FT +  +     G  A+  +K+ +  L + +A ELG  GI V  V 
Sbjct: 119 AAKRMLARGRGTIIFTGATASLRGRAGFAAFAGAKFALRALAQSMARELGPKGIHVAHV- 177

Query: 193 PYGLATGMSMKGGVDPALIESSMSQMGNLKGE--FLKTDGIANAALYL 238
                    + GG+D   I     +    K E   L  D IA A   L
Sbjct: 178 --------IIDGGIDTDFIRERFPKRDERKEEDGILDPDAIAEAYWQL 217

This subgroup resembles the classical SDRs, but has an incomplete match to the canonical glycine rich NAD-binding motif and lacks the typical active site tetrad (instead of the critical active site Tyr, it has Phe, but contains the nearby Lys). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 238

>gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional

 Score =  103 bits (259), Expect = 2e-26
 Identities = 61/188 (32%), Positives = 91/188 (48%), Gaps = 14/188 (7%)

Query: 20  ITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIH-CDISNEDEVIN 78
           ITG ASGIG     LF   G +V   D+ +     LA +LG    +    D+++      
Sbjct: 6   ITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAA--- 62

Query: 79  LVDTAVSKF-----GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHA 133
             D A++ F     G+LD+++NNAGIL    G   D P    +R+I++N  G   GA HA
Sbjct: 63  -WDAALADFAAATGGRLDVLFNNAGIL--RGGPFEDIPLEAHDRVIDINVKGVLNGA-HA 118

Query: 134 ARVMVPQQKGCILFTASACTEIAGLGSPA-YTISKYGILGLVKCLAAELGQYGIRVNCVS 192
           A   +    G  +   S+ + I G    A Y+ +K+ + GL + L  E  ++GIRV  V 
Sbjct: 119 ALPYLKATPGARVINTSSASAIYGQPGLAVYSATKFAVRGLTEALDLEWRRHGIRVADVM 178

Query: 193 PYGLATGM 200
           P  + T M
Sbjct: 179 PLFVDTAM 186

Length = 260

>gnl|CDD|132368 TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

 Score =  103 bits (258), Expect = 3e-26
 Identities = 78/259 (30%), Positives = 127/259 (49%), Gaps = 14/259 (5%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDIS 71
           RL+G+V ++TGGASG+G   V+ F   GA+V + D      ++L    G  V  +  D+ 
Sbjct: 2   RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVR 61

Query: 72  NEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDL----ERLINVNTIGGF 127
           + D+    V   V+ FGK+D +  NAGI D S  +++D P   +    + + ++N  G  
Sbjct: 62  SLDDHKEAVARCVAAFGKIDCLIPNAGIWDYST-ALVDIPDDRIDEAFDEVFHINVKGYL 120

Query: 128 LGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIR 187
           L  K A   +V   +G ++FT S        G P YT +K+ ++GLVK LA EL  Y +R
Sbjct: 121 LAVKAALPALV-ASRGSVIFTISNAGFYPNGGGPLYTAAKHAVVGLVKELAFELAPY-VR 178

Query: 188 VNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLAS------- 240
           VN V+P G+++ +     +  A    S   +G++    L    + +A  Y  +       
Sbjct: 179 VNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLPIGRMPDAEEYTGAYVFFATR 238

Query: 241 DESSYVSGQNLVVDGGFSV 259
            ++   +G  L  DGG  V
Sbjct: 239 GDTVPATGAVLNYDGGMGV 257

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. Length = 262

>gnl|CDD|222222 pfam13561, adh_short_C2, Enoyl-(Acyl carrier protein) reductase

 Score =  102 bits (256), Expect = 4e-26
 Identities = 63/253 (24%), Positives = 111/253 (43%), Gaps = 32/253 (12%)

Query: 22  GGASGIGAMAVELFHENGAKVVIADVQDKLG----EDLADKLGQDVCYIHCDISNEDEVI 77
              + I     +   E GA+VV+      L     ++LA +L  DV  I  D+++++++ 
Sbjct: 3   ADDNSIAWAIAKAAAEEGAEVVLTTWPPALRMGAVDELAKELPADV--IPLDVTSDEDID 60

Query: 78  NLVDTAVSKFGKLDIMYNNAGILDRSFGSI--LDTPKSDLERLINVNTIGGFLGAKHAAR 135
            L +      GK+D + ++  +          LDT +    + ++++       AK A  
Sbjct: 61  ELFEKVKEDGGKIDFLVHSIAMSPEIRKGKPYLDTSREGFLKALDISAYSFISLAKAAKP 120

Query: 136 VMVPQQKGCILFTASACTEIAGLGS----PAYT---ISKYGILGLVKCLAAELGQYGIRV 188
           +M            S    ++ + +    P Y    ++K  +  L + LA ELG+ GIRV
Sbjct: 121 LMNE--------GGSIVA-LSYIAAERVFPGYGGMGVAKAALESLARYLAYELGRKGIRV 171

Query: 189 NCVSPYGLATGMSMKG--GVDPALIES-SMSQMGNLKGEFLKTDGIANAALYLASDESSY 245
           N +S     T  +  G  G D  +  +  M+ +G         + +ANAA +L SD +  
Sbjct: 172 NTISAGPTKT-TAGSGIGGFDKMVEYAEEMAPLGRN----ASAEEVANAAAFLLSDLARG 226

Query: 246 VSGQNLVVDGGFS 258
           ++GQ L VDGGFS
Sbjct: 227 ITGQILYVDGGFS 239

Length = 239

>gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional

 Score =  102 bits (257), Expect = 4e-26
 Identities = 74/260 (28%), Positives = 124/260 (47%), Gaps = 21/260 (8%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHC 68
           RL+ +VA++TG   G+GA     F E GA V+IA   +   +++A+++   G+    +  
Sbjct: 7   RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAA 66

Query: 69  DISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGS----ILDTPKSDLERLINVNTI 124
           D+++ +    L   AV  FG+LDI+ NN G      G+    +L T   DL      N  
Sbjct: 67  DLAHPEATAGLAGQAVEAFGRLDIVVNNVG------GTMPNPLLSTSTKDLADAFTFNVA 120

Query: 125 GGFLGAKHAARVMVPQQ-KGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQ 183
                   A  +M+     G ++  +S    +AG G  AY  +K  +    +  A +L  
Sbjct: 121 TAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGRGFAAYGTAKAALAHYTRLAALDLCP 180

Query: 184 YGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLK--GEFLKTDGIANAALYLASD 241
             IRVN ++P  + T  +++       + + M +   L+  G+    + IA AA+YLAS 
Sbjct: 181 R-IRVNAIAPGSILTS-ALEVVAANDELRAPMEKATPLRRLGD---PEDIAAAAVYLASP 235

Query: 242 ESSYVSGQNLVVDGGFSVVN 261
             SY++G+ L VDGG +  N
Sbjct: 236 AGSYLTGKTLEVDGGLTFPN 255

Length = 263

>gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional

 Score =  102 bits (256), Expect = 5e-26
 Identities = 67/264 (25%), Positives = 111/264 (42%), Gaps = 25/264 (9%)

Query: 8   APFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIH 67
           + F  L GK A++TGG  GIGA  V    E GA+VV             D L + V ++ 
Sbjct: 2   SFFLELAGKRALVTGGTKGIGAATVARLLEAGARVVTT------ARSRPDDLPEGVEFVA 55

Query: 68  CDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGF 127
            D++  +    +    + + G +DI+ +  G      G        + +  +N+N     
Sbjct: 56  ADLTTAEGCAAVARAVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLN----L 111

Query: 128 LGAKHAARVMVP----QQKGCILFTASACTEIAGLGSP-AYTISKYGILGLVKCLAAELG 182
           L A    R ++P    +  G I+   S    +    S  AY  +K  +    K L+ E+ 
Sbjct: 112 LAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLPESTTAYAAAKAALSTYSKSLSKEVA 171

Query: 183 QYGIRVNCVSP--------YGLATGMSMKGGVD-PALIESSMSQMGNLK-GEFLKTDGIA 232
             G+RVN VSP          LA  ++   G D     +  M  +G +  G   + + +A
Sbjct: 172 PKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIPLGRPAEPEEVA 231

Query: 233 NAALYLASDESSYVSGQNLVVDGG 256
               +LASD ++ ++G   V+DGG
Sbjct: 232 ELIAFLASDRAASITGTEYVIDGG 255

Length = 260

>gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated

 Score =  106 bits (266), Expect = 5e-26
 Identities = 64/192 (33%), Positives = 93/192 (48%), Gaps = 8/192 (4%)

Query: 7   AAPFKRLEGKVAIITGGASGIG-AMAVELFHENGAKVVIADVQDKLGEDLADKLGQD--V 63
             P     GK+ ++TG  SGIG   A+  F   GA+VV +D+ +   E  A+ +     V
Sbjct: 307 GRPRGPFSGKLVVVTGAGSGIGRETALA-FAREGAEVVASDIDEAAAERTAELIRAAGAV 365

Query: 64  CYIH-CDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVN 122
            + +  D+S+ D +    +   ++ G  DI+ NNAGI     G  LDT   D +R+++VN
Sbjct: 366 AHAYRVDVSDADAMEAFAEWVRAEHGVPDIVVNNAGI--GMAGGFLDTSAEDWDRVLDVN 423

Query: 123 TIGGFLGAKHAARVMVPQ-QKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAEL 181
             G   G +   R MV +   G I+  ASA         PAY  SK  +L L +CL AEL
Sbjct: 424 LWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPAYATSKAAVLMLSECLRAEL 483

Query: 182 GQYGIRVNCVSP 193
              GI V  + P
Sbjct: 484 AAAGIGVTAICP 495

Length = 582

>gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional

 Score =  101 bits (254), Expect = 7e-26
 Identities = 71/272 (26%), Positives = 123/272 (45%), Gaps = 46/272 (16%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDK-LGEDLA---DKLGQDVCYIH 67
              GKVA++TG + GIG        E G  + +   + +   E+ A   + LG+    + 
Sbjct: 1   VFSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVK 60

Query: 68  CDISNEDEVINLVDTAVSKFGKLDIMYNNA--GILDRSFGSILDTPKSDLERLINVNTIG 125
            ++ + +++  +      +FG+LD+  NNA  G+L       ++  +S  +  +N+N   
Sbjct: 61  ANVGDVEKIKEMFAQIDEEFGRLDVFVNNAASGVLR----PAMELEESHWDWTMNINAKA 116

Query: 126 GFLGAKHAARVMVPQQKGCILFTASACTEIAGLGS----PAYT---ISKYGILGLVKCLA 178
               A+ AA++M     G I+        ++ LGS      YT   +SK  +  L + LA
Sbjct: 117 LLFCAQEAAKLMEKVGGGKII-------SLSSLGSIRYLENYTTVGVSKAALEALTRYLA 169

Query: 179 AELGQYGIRVNCVSPYGLATGMSMKGGVDP----------ALIESSMSQMGNLKGEFLKT 228
            EL   GI VN VS           G VD            L+E + ++     G  ++ 
Sbjct: 170 VELAPKGIAVNAVS----------GGAVDTDALKHFPNREELLEDARAKT--PAGRMVEP 217

Query: 229 DGIANAALYLASDESSYVSGQNLVVDGGFSVV 260
           + +ANA L+L S E+  + GQ ++VDGG S++
Sbjct: 218 EDVANAVLFLCSPEADMIRGQTIIVDGGRSLL 249

Length = 250

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score =  101 bits (254), Expect = 9e-26
 Identities = 69/259 (26%), Positives = 123/259 (47%), Gaps = 23/259 (8%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVI-----ADVQDKLGEDLADKLGQDVCYI 66
           RL+G+ A+ITG + GIG      F   GA V+I       +     E   +   ++V  +
Sbjct: 6   RLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGL 65

Query: 67  HCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGG 126
             D+S++++   ++D     +  L I+ NNAG   R   + +D  + +   +   N    
Sbjct: 66  AADVSDDEDRRAILDWVEDHWDGLHILVNNAGGNIRK--AAIDYTEDEWRGIFETNLFSA 123

Query: 127 FLGAKHAARVMVPQQKGCILFTASACTEIAGL-----GSPAYTISKYGILGLVKCLAAEL 181
           F  +++A  ++       I+   S    ++GL     G+P Y ++K  +L + + LA E 
Sbjct: 124 FELSRYAHPLLKQHASSAIVNIGS----VSGLTHVRSGAP-YGMTKAALLQMTRNLAVEW 178

Query: 182 GQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQ--MGNLKGEFLKTDGIANAALYLA 239
            + GIRVN V+P+ + T ++     DP   E  + +  M  + GE    + +A A  +L 
Sbjct: 179 AEDGIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPMRRV-GE---PEEVAAAVAFLC 234

Query: 240 SDESSYVSGQNLVVDGGFS 258
              +SY++GQ + VDGGF 
Sbjct: 235 MPAASYITGQCIAVDGGFL 253

Length = 257

>gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs

 Score =  101 bits (253), Expect = 9e-26
 Identities = 66/255 (25%), Positives = 108/255 (42%), Gaps = 35/255 (13%)

Query: 16  KVAIITGGASGIGAMAVELFHENGAKVVI------ADVQDKLGEDLADKLGQDVCYIHCD 69
            VA++TG A  IG    E     G +VV+      A+ Q    E   + L      +  D
Sbjct: 1   AVALVTGAAKRIGRAIAEALAAEGYRVVVHYNRSEAEAQRLKDEL--NALRNSAVLVQAD 58

Query: 70  ISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSF--GSILDTPKSDLERLINVNTIGGF 127
           +S+     +LV  A   FG+ D++ NNA     +F    +    +     L  +N    +
Sbjct: 59  LSDFAACADLVAAAFRAFGRCDVLVNNAS----AFYPTPLGQGSEDAWAELFGINLKAPY 114

Query: 128 LGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIR 187
           L  +  AR +   + G I+    A T+    G  AY +SK  + GL +  A EL    IR
Sbjct: 115 LLIQAFARRLAGSRNGSIINIIDAMTDRPLTGYFAYCMSKAALEGLTRSAALELAPN-IR 173

Query: 188 VNCVSPYGLATGMSMKGGVDP------ALIESSMSQMGNLKGEFLKTDGIANAALYLASD 241
           VN ++P     G+ +            AL +  + +  + +        IA+A ++L   
Sbjct: 174 VNGIAP-----GLILLPEDMDAEYRENALRKVPLKRRPSAE-------EIADAVIFLLD- 220

Query: 242 ESSYVSGQNLVVDGG 256
            S+Y++GQ + VDGG
Sbjct: 221 -SNYITGQIIKVDGG 234

Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234

>gnl|CDD|236099 PRK07791, PRK07791, short chain dehydrogenase; Provisional

 Score =  102 bits (255), Expect = 1e-25
 Identities = 83/265 (31%), Positives = 122/265 (46%), Gaps = 33/265 (12%)

Query: 13  LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKL-GEDLADKLGQDVC-YIHC-- 68
           L+G+V I+TG   GIG      F   GA+VV+ D+   L G        Q V   I    
Sbjct: 4   LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAG 63

Query: 69  --------DISNEDEVINLVDTAVSKFGKLDIMYNNAGIL-DRSFGSILDTPKSDLERLI 119
                   DI++ D   NLVD AV  FG LD++ NNAGIL DR   +     + + + +I
Sbjct: 64  GEAVANGDDIADWDGAANLVDAAVETFGGLDVLVNNAGILRDRMIAN---MSEEEWDAVI 120

Query: 120 NVNTIGGFLGAKHAARVMVPQQK------GCILFTASACTEIAGLGSPAYTISKYGILGL 173
            V+  G F   +HAA     + K        I+ T+S       +G   Y+ +K GI  L
Sbjct: 121 AVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQGSVGQGNYSAAKAGIAAL 180

Query: 174 VKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEF--LKTDGI 231
               AAELG+YG+ VN ++P   A    M   V   ++          +GEF  +  + +
Sbjct: 181 TLVAAAELGRYGVTVNAIAP---AARTRMTETVFAEMMAKPE------EGEFDAMAPENV 231

Query: 232 ANAALYLASDESSYVSGQNLVVDGG 256
           +   ++L S ES  V+G+   V+GG
Sbjct: 232 SPLVVWLGSAESRDVTGKVFEVEGG 256

Length = 286

>gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional

 Score =  101 bits (253), Expect = 1e-25
 Identities = 74/251 (29%), Positives = 123/251 (49%), Gaps = 9/251 (3%)

Query: 13  LEGKVAIITGGASGIGAMAVELFHENGAKVVI-ADVQDKLGEDLADKLGQDVCYIHC--- 68
           L G+ A++TG + GIG    E   + GA+V++      KL    A+ L       H    
Sbjct: 8   LTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKL-AAAAESLKGQGLSAHALAF 66

Query: 69  DISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFL 128
           D+++ D V   +D   ++ G +DI+ NNAG+  R+   + D P    ERL+  N    F 
Sbjct: 67  DVTDHDAVRAAIDAFEAEIGPIDILVNNAGMQFRT--PLEDFPADAFERLLRTNISSVFY 124

Query: 129 GAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRV 188
             +  AR M+ +  G I+  AS  + +A  G   YT +K  +  L K +A +  ++G++ 
Sbjct: 125 VGQAVARHMIARGAGKIINIASVQSALARPGIAPYTATKGAVGNLTKGMATDWAKHGLQC 184

Query: 189 NCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSG 248
           N ++P    T ++     DP    S+  +     G + K + +  A ++LASD SS+V+G
Sbjct: 185 NAIAPGYFDTPLNAALVADPEF--SAWLEKRTPAGRWGKVEELVGACVFLASDASSFVNG 242

Query: 249 QNLVVDGGFSV 259
             L VDGG + 
Sbjct: 243 HVLYVDGGITA 253

Length = 255

>gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  100 bits (251), Expect = 3e-25
 Identities = 77/259 (29%), Positives = 121/259 (46%), Gaps = 23/259 (8%)

Query: 16  KVAIITGGASGIG-AMAVELFHENGAKVVIADVQDKLGEDLAD------KLGQDVCYIHC 68
            VA++TGG  GIG  +A  L    G  + I D  D   E+LA        LG +V +   
Sbjct: 3   PVALVTGGRRGIGLGIARAL-AAAGFDLAINDRPDD--EELAATQQELRALGVEVIFFPA 59

Query: 69  DISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFL 128
           D+++      ++D A + +G++D + NNAG+  +  G +LD      +R++ +N  G F 
Sbjct: 60  DVADLSAHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFF 119

Query: 129 GAKHAARVMVPQQK------GCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELG 182
             +  A+ M+ Q +        I+F +S    +       Y ISK G+    +  AA L 
Sbjct: 120 LTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRGEYCISKAGLSMAAQLFAARLA 179

Query: 183 QYGIRVNCVSPYGLATGMS--MKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLAS 240
           + GI V  V P  + T M+  +    D ALI   +  M    GE    + +A A   LAS
Sbjct: 180 EEGIGVYEVRPGLIKTDMTAPVTAKYD-ALIAKGLVPMPRW-GE---PEDVARAVAALAS 234

Query: 241 DESSYVSGQNLVVDGGFSV 259
            +  Y +GQ + VDGG S+
Sbjct: 235 GDLPYSTGQAIHVDGGLSI 253

Length = 256

>gnl|CDD|183714 PRK12742, PRK12742, oxidoreductase; Provisional

 Score = 99.4 bits (248), Expect = 4e-25
 Identities = 76/249 (30%), Positives = 118/249 (47%), Gaps = 23/249 (9%)

Query: 15  GKVAIITGGASGIGAMAVELFHENGAKVVI--ADVQDKLGEDLADKLGQDVCYIHCDISN 72
           GK  ++ GG+ GIGA  V  F  +GA V    A  +D   E LA + G     +  D ++
Sbjct: 6   GKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDA-AERLAQETGATA--VQTDSAD 62

Query: 73  EDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKH 132
            D VI++V  +    G LDI+  NAGI    FG  L+    D++RL  +N    +  +  
Sbjct: 63  RDAVIDVVRKS----GALDILVVNAGIA--VFGDALELDADDIDRLFKINIHAPYHASVE 116

Query: 133 AARVMVPQQKGCILFTASAC---TEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVN 189
           AAR M   + G I+   S       +AG+   AY  SK  + G+ + LA + G  GI +N
Sbjct: 117 AARQM--PEGGRIIIIGSVNGDRMPVAGMA--AYAASKSALQGMARGLARDFGPRGITIN 172

Query: 190 CVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQ 249
            V P  + T  +   G    ++ S M+    +K    + + +A    +LA  E+S+V+G 
Sbjct: 173 VVQPGPIDTDANPANGPMKDMMHSFMA----IK-RHGRPEEVAGMVAWLAGPEASFVTGA 227

Query: 250 NLVVDGGFS 258
              +DG F 
Sbjct: 228 MHTIDGAFG 236

Length = 237

>gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional

 Score =  100 bits (250), Expect = 5e-25
 Identities = 61/210 (29%), Positives = 101/210 (48%), Gaps = 18/210 (8%)

Query: 20  ITGGASGIG-AMAVELFHENGAKVVIADVQDKLGEDLADKLGQ---DVCYIHCDISNEDE 75
           ITG ASG+G A+A+  +   G ++ +ADV ++ GE+    L +   D  Y  CD+ +  +
Sbjct: 5   ITGAASGLGRAIALR-WAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQ 63

Query: 76  VINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAAR 135
           +  L      K+G +D++ NNAG+   S G   +    D +  I +N +G   G K    
Sbjct: 64  LTALAQACEEKWGGIDVIVNNAGV--ASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLP 121

Query: 136 VMVPQQKGCILFTAS--ACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSP 193
           +   Q+ G I+  AS     +   + S  Y ++K G++ L + L  EL    I V+ V P
Sbjct: 122 LFKRQKSGRIVNIASMAGLMQGPAMSS--YNVAKAGVVALSETLLVELADDEIGVHVVCP 179

Query: 194 YGLATGM--SMKGGVDPALIESSMSQMGNL 221
               T +  S +G  +PA+      Q+G L
Sbjct: 180 SFFQTNLLDSFRGP-NPAMKA----QVGKL 204

Length = 270

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score =  100 bits (250), Expect = 5e-25
 Identities = 63/188 (33%), Positives = 93/188 (49%), Gaps = 17/188 (9%)

Query: 15  GKVAIITGGASGIG-AMAVELFHENGAKVVIADVQ----DKLGEDLADKLGQDVCYIHCD 69
           GKV IITG + GIG A+AV L    GA++V+A         L ++LAD  G +   +  D
Sbjct: 1   GKVVIITGASEGIGRALAVRL-ARAGAQLVLAARNETRLASLAQELAD-HGGEALVVPTD 58

Query: 70  ISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRS-FGSILDTPKSDLERLINVNTIGGFL 128
           +S+ +    L++ AV++FG +DI+ NNAGI   S F  + D   S  ER++ VN    +L
Sbjct: 59  VSDAEACERLIEAAVARFGGIDILVNNAGITMWSRFDELTDL--SVFERVMRVN----YL 112

Query: 129 GAKHAARVMVPQ---QKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYG 185
           GA +     +P     +G I+  +S            Y  SK+ + G    L  EL   G
Sbjct: 113 GAVYCTHAALPHLKASRGQIVVVSSLAGLTGVPTRSGYAASKHALHGFFDSLRIELADDG 172

Query: 186 IRVNCVSP 193
           + V  V P
Sbjct: 173 VAVTVVCP 180

Length = 263

>gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional

 Score = 99.1 bits (247), Expect = 8e-25
 Identities = 73/255 (28%), Positives = 121/255 (47%), Gaps = 17/255 (6%)

Query: 13  LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHC---D 69
           L GK  +ITG A GIG +      E GA+++I D+  +  E    KL Q+    H    +
Sbjct: 7   LAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFN 66

Query: 70  ISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLG 129
           ++++ EV   ++      G +D++ NNAGI  R      + P+ +   +I VN    FL 
Sbjct: 67  VTHKQEVEAAIEHIEKDIGPIDVLINNAGIQRRH--PFTEFPEQEWNDVIAVNQTAVFLV 124

Query: 130 AKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVN 189
           ++  AR MV +Q G I+   S  +E+       Y  SK  +  L + +  EL ++ I+VN
Sbjct: 125 SQAVARYMVKRQAGKIINICSMQSELGRDTITPYAASKGAVKMLTRGMCVELARHNIQVN 184

Query: 190 CVSPYGLATGMSMKGGVDPALIE-----SSMSQMGNLKGEFLKTDGIANAALYLASDESS 244
            ++P    T M+     D A        +  ++ G+ +        +  AA++L+S  S 
Sbjct: 185 GIAPGYFKTEMTKALVEDEAFTAWLCKRTPAARWGDPQ-------ELIGAAVFLSSKASD 237

Query: 245 YVSGQNLVVDGGFSV 259
           +V+G  L VDGG  V
Sbjct: 238 FVNGHLLFVDGGMLV 252

Length = 254

>gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional

 Score = 98.1 bits (245), Expect = 1e-24
 Identities = 64/229 (27%), Positives = 101/229 (44%), Gaps = 19/229 (8%)

Query: 16  KVAIITGGASGIGAMAVELFHENGAKVV-IADVQDKLGEDLADKL---GQDVCYIHCDIS 71
             A+ITG +SGIG      F + G  +  +A  QD L E LA +L   G        D+S
Sbjct: 7   PRALITGASSGIGKATALAFAKAGWDLALVARSQDAL-EALAAELRSTGVKAAAYSIDLS 65

Query: 72  NEDEVINLVDTAVSKFGKLDIMYNNAGILDRSF-GSILDTPKSDLERLINVNTIGGFLGA 130
           N + +   +   + +FG  D++ NNAG+   ++ G +L+ P SD + +I +N    F   
Sbjct: 66  NPEAIAPGIAELLEQFGCPDVLINNAGM---AYTGPLLEMPLSDWQWVIQLNLTSVFQCC 122

Query: 131 KHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNC 190
                 M  +  G I+  +S     A     AY +SK  +    KCLA E   +GIRV  
Sbjct: 123 SAVLPGMRARGGGLIINVSSIAARNAFPQWGAYCVSKAALAAFTKCLAEEERSHGIRVCT 182

Query: 191 VSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLA 239
           ++           G V+  L ++   Q    +   L  + +A   L+LA
Sbjct: 183 ITL----------GAVNTPLWDTETVQADFDRSAMLSPEQVAQTILHLA 221

Length = 241

>gnl|CDD|181668 PRK09135, PRK09135, pteridine reductase; Provisional

 Score = 98.1 bits (245), Expect = 2e-24
 Identities = 79/261 (30%), Positives = 111/261 (42%), Gaps = 31/261 (11%)

Query: 14  EGKVAIITGGASGIGAMAVELFHENGAKVVI-----ADVQDKLGEDLADKLGQDVCYIHC 68
             KVA+ITGGA  IGA      H  G +V I     A   D L  +L          +  
Sbjct: 5   SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQA 64

Query: 69  DISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSF-----GSILDTPKSDLERLINVNT 123
           D+ + D +  LV   V+ FG+LD + NNA     SF     GSI +    D   L   N 
Sbjct: 65  DLLDPDALPELVAACVAAFGRLDALVNNAS----SFYPTPLGSITEAQWDD---LFASNL 117

Query: 124 IGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQ 183
              F  +  AA   + +Q+G I+       E    G P Y  +K  +  L + LA EL  
Sbjct: 118 KAPFFLS-QAAAPQLRKQRGAIVNITDIHAERPLKGYPVYCAAKAALEMLTRSLALELAP 176

Query: 184 YGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDG----IANAALYLA 239
             +RVN V+P     G  +      +  E +   +  L    LK  G    IA A  +L 
Sbjct: 177 -EVRVNAVAP-----GAILWPEDGNSFDEEARQAI--LARTPLKRIGTPEDIAEAVRFLL 228

Query: 240 SDESSYVSGQNLVVDGGFSVV 260
             ++S+++GQ L VDGG S+ 
Sbjct: 229 -ADASFITGQILAVDGGRSLT 248

Length = 249

>gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional

 Score = 97.1 bits (242), Expect = 4e-24
 Identities = 83/258 (32%), Positives = 129/258 (50%), Gaps = 30/258 (11%)

Query: 15  GKVAIITGGASGIG-AMAVELFHENGAKVVI-ADVQDKLGE---DLADKLGQDVCYIHCD 69
            KV IITGG+SG+G AMA   F E GA VVI    ++KL E   ++    GQ V  +  D
Sbjct: 1   EKVVIITGGSSGMGKAMAKR-FAEEGANVVITGRTKEKLEEAKLEIEQFPGQ-VLTVQMD 58

Query: 70  ISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDL-----ERLINVNTI 124
           + N ++V  +V+    KFG++D + NNA       G+ +  P  DL       +I++   
Sbjct: 59  VRNPEDVQKMVEQIDEKFGRIDALINNAA------GNFI-CPAEDLSVNGWNSVIDIVLN 111

Query: 125 GGFLGAKHAARVMVPQ-QKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELG- 182
           G F  ++   +  + +  KG I+   +     AG G      +K G+L + + LA E G 
Sbjct: 112 GTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLAMTRTLAVEWGR 171

Query: 183 QYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLK----GEFLKTDGIANAALYL 238
           +YGIRVN ++P      +   GG D  L ES  +    ++    G     + IA  A +L
Sbjct: 172 KYGIRVNAIAP----GPIERTGGAD-KLWESEEAAKRTIQSVPLGRLGTPEEIAGLAYFL 226

Query: 239 ASDESSYVSGQNLVVDGG 256
            SDE++Y++G  + +DGG
Sbjct: 227 LSDEAAYINGTCITMDGG 244

Length = 252

>gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3

 Score = 96.3 bits (240), Expect = 5e-24
 Identities = 52/168 (30%), Positives = 82/168 (48%), Gaps = 5/168 (2%)

Query: 17  VAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNE 73
           V +ITG +SGIG      F E GAKVV+A    +   +LA ++   G +   +  D+++ 
Sbjct: 2   VVVITGASSGIGRATALAFAERGAKVVLAARSAEALHELAREVRELGGEAIAVVADVADA 61

Query: 74  DEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHA 133
            +V    DTAV +FG++D   NNAG+    FG   D    +  R+ +VN +G   G   A
Sbjct: 62  AQVERAADTAVERFGRIDTWVNNAGV--AVFGRFEDVTPEEFRRVFDVNYLGHVYGTLAA 119

Query: 134 ARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAEL 181
              +  +  G ++   S     +     AY+ SK+ + G  + L AEL
Sbjct: 120 LPHLRRRGGGALINVGSLLGYRSAPLQAAYSASKHAVRGFTESLRAEL 167

These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 93.8 bits (234), Expect = 9e-24
 Identities = 41/176 (23%), Positives = 69/176 (39%), Gaps = 20/176 (11%)

Query: 16  KVAIITGGASGIGAMAVELFHENGAKVVI-------ADVQDKLGEDLADKLGQDVCYIHC 68
              +ITGG  G+G          GA+ ++       A    +L  +L   LG +V    C
Sbjct: 1   GTVLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAELVAELEA-LGAEVTVAAC 59

Query: 69  DISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFL 128
           D+++ D +  L+    +  G LD + +NAG+LD   G + +      ER++         
Sbjct: 60  DVADRDALAALLAALPAALGPLDGVVHNAGVLD--DGPLEELTPERFERVLAPK----VT 113

Query: 129 GAKHAARVMVPQQKGCILFTASACTEIAGLGSP---AYTISKYGILGLVKCLAAEL 181
           GA +   +      G  +  +S       LGSP    Y  +   +  L +   AE 
Sbjct: 114 GAWNLHELTRDLDLGAFVLFSSV---AGVLGSPGQANYAAANAALDALAEHRRAEG 166

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9

 Score = 95.2 bits (237), Expect = 1e-23
 Identities = 59/203 (29%), Positives = 97/203 (47%), Gaps = 7/203 (3%)

Query: 16  KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIH-CDISNED 74
           K   ITG ASGIG     LF  NG  V + D+ +     LA +LG +       D+++  
Sbjct: 1   KAIFITGAASGIGRETALLFARNGWFVGLYDIDEDGLAALAAELGAENVVAGALDVTDRA 60

Query: 75  EVIN-LVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHA 133
                L D A +  G+LD ++NNAG+     G   D P +  +R++++N  G   GA +A
Sbjct: 61  AWAAALADFAAATGGRLDALFNNAGVG--RGGPFEDVPLAAHDRMVDINVKGVLNGA-YA 117

Query: 134 ARVMVPQQKGCILFTASACTEIAGLGSPA-YTISKYGILGLVKCLAAELGQYGIRVNCVS 192
           A   +    G  +   ++ + I G    A Y+ +K+ + GL + L  E  ++GIRV  V 
Sbjct: 118 ALPYLKATPGARVINTASSSAIYGQPDLAVYSATKFAVRGLTEALDVEWARHGIRVADVW 177

Query: 193 PYGLATGMSMKGGVDPALIESSM 215
           P+ + T + +  G   A  +  +
Sbjct: 178 PWFVDTPI-LTKGETGAAPKKGL 199

This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227

>gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase

 Score = 94.8 bits (236), Expect = 3e-23
 Identities = 68/250 (27%), Positives = 117/250 (46%), Gaps = 20/250 (8%)

Query: 16  KVAIITGGASGIGAMAVELFHENGAKVVI------ADVQDKLGEDLADKLGQDVCYIHCD 69
           ++A++TGG  GIG    +   ++G +V           +  L E  A  LG D   +  D
Sbjct: 1   RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGA--LGFDFRVVEGD 58

Query: 70  ISNEDEVINLVDTAVSKFGKLDIMYNNAGIL-DRSFGSILDTPKSDLERLINVNTIGGFL 128
           +S+ +     V    ++ G +D++ NNAGI  D +F  +          +I+ N    F 
Sbjct: 59  VSSFESCKAAVAKVEAELGPIDVLVNNAGITRDATFKKM---TYEQWSAVIDTNLNSVFN 115

Query: 129 GAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRV 188
             +     M  +  G I+  +S   +    G   Y+ +K G++G  K LA E    G+ V
Sbjct: 116 VTQPVIDGMRERGWGRIINISSVNGQKGQFGQTNYSAAKAGMIGFTKALAQEGATKGVTV 175

Query: 189 NCVSPYGLATGMSMKGGVDPALIESSMSQ--MGNLKGEFLKTDGIANAALYLASDESSYV 246
           N +SP  +AT M M   +   ++ S ++Q  +G L     + + IA A  +LAS+E+ Y+
Sbjct: 176 NTISPGYIATDMVM--AMREDVLNSIVAQIPVGRLG----RPEEIAAAVAFLASEEAGYI 229

Query: 247 SGQNLVVDGG 256
           +G  L ++GG
Sbjct: 230 TGATLSINGG 239

This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score = 94.1 bits (234), Expect = 5e-23
 Identities = 65/247 (26%), Positives = 116/247 (46%), Gaps = 12/247 (4%)

Query: 16  KVAIITGGASGIG-AMAVELFHENGAKVVIADVQDK-LGEDLADKLGQDVCYIHC---DI 70
           K+A++TG   GIG A+A EL   +G +V+          +D  ++ G     +     D+
Sbjct: 3   KIALVTGAKRGIGSAIARELL-NDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDV 61

Query: 71  SNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGA 130
           ++ +E    +     + G +DI+ NNAGI  R           +   +IN N    F   
Sbjct: 62  TDTEECAEALAEIEEEEGPVDILVNNAGI-TRD-SVFKRMSHQEWNDVINTNLNSVFNVT 119

Query: 131 KHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNC 190
           +     M  Q  G I+  +S        G   Y+ +K G++G  K LA+E  +YGI VNC
Sbjct: 120 QPLFAAMCEQGYGRIINISSVNGLKGQFGQTNYSAAKAGMIGFTKALASEGARYGITVNC 179

Query: 191 VSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQN 250
           ++P  +AT   M   + P +++S ++Q+          + IA A  +L S+ + +++G+ 
Sbjct: 180 IAPGYIAT--PMVEQMGPEVLQSIVNQIP--MKRLGTPEEIAAAVAFLVSEAAGFITGET 235

Query: 251 LVVDGGF 257
           + ++GG 
Sbjct: 236 ISINGGL 242

Length = 245

>gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional

 Score = 94.7 bits (236), Expect = 6e-23
 Identities = 65/211 (30%), Positives = 103/211 (48%), Gaps = 29/211 (13%)

Query: 11  KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQ-DKLGEDLAD--KLGQDVCYIH 67
           K   GKVA+ITG ASG G     +    G K+V+ADVQ D L   +A+    G +V  + 
Sbjct: 2   KDFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVR 61

Query: 68  CDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGF 127
            D+S+  +V  L D A+ +FG + +++NNAG+   + G + +   +D E ++ VN  G  
Sbjct: 62  TDVSDAAQVEALADAALERFGAVHLLFNNAGV--GAGGLVWENSLADWEWVLGVNLWGVI 119

Query: 128 LGAKHAARVMVP----------QQKGCILFTASACTEIAGLGSP----AYTISKYGILGL 173
               H  R   P            +G I+ TAS    +AGL +P     Y +SK+ ++ L
Sbjct: 120 ----HGVRAFTPLMLAAAEKDPAYEGHIVNTAS----MAGLLAPPAMGIYNVSKHAVVSL 171

Query: 174 VKCLAAELGQYGIRVNC--VSPYGLATGMSM 202
            + L  +L     +V    + PY + TG+  
Sbjct: 172 TETLYQDLSLVTDQVGASVLCPYFVPTGIWQ 202

Length = 287

>gnl|CDD|135637 PRK05876, PRK05876, short chain dehydrogenase; Provisional

 Score = 94.6 bits (235), Expect = 6e-23
 Identities = 64/196 (32%), Positives = 101/196 (51%), Gaps = 14/196 (7%)

Query: 13  LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCD 69
             G+ A+ITGGASGIG      F   GA+VV+ DV         + L   G DV  + CD
Sbjct: 4   FPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCD 63

Query: 70  ISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLG 129
           + + +EV +L D A    G +D++++NAGI+    G I++    D   +I+V+      G
Sbjct: 64  VRHREEVTHLADEAFRLLGHVDVVFSNAGIV--VGGPIVEMTHDDWRWVIDVD----LWG 117

Query: 130 AKHAARVMVPQ-----QKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQY 184
           + H     +P+       G ++FTAS    +   G  AY ++KYG++GL + LA E+   
Sbjct: 118 SIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVTAD 177

Query: 185 GIRVNCVSPYGLATGM 200
           GI V+ + P  + T +
Sbjct: 178 GIGVSVLCPMVVETNL 193

Length = 275

>gnl|CDD|223696 COG0623, FabI, Enoyl-[acyl-carrier-protein]

 Score = 94.2 bits (235), Expect = 7e-23
 Identities = 71/262 (27%), Positives = 124/262 (47%), Gaps = 26/262 (9%)

Query: 13  LEGKVAIITGGAS--GIGAMAVELFHENGAKVVIADVQDKLG---EDLADKLGQDVCYIH 67
           LEGK  +I G A+   I     +   E GA++      ++L    E+LA++LG D+    
Sbjct: 4   LEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERLEKRVEELAEELGSDLVL-P 62

Query: 68  CDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSF--GSILDTPKSDLERLINVNTIG 125
           CD++N++ +  L  T   K+GKLD + ++     +    G  LDT +      ++++   
Sbjct: 63  CDVTNDESIDALFATIKKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYS 122

Query: 126 GFLGAKHAARVMVPQQKGCILFTASACTEIAGLGS----PAY---TISKYGILGLVKCLA 178
            F     AAR ++    G  + T +       LGS    P Y    ++K  +   V+ LA
Sbjct: 123 -FTALAKAARPLMN--NGGSILTLTY------LGSERVVPNYNVMGVAKAALEASVRYLA 173

Query: 179 AELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYL 238
           A+LG+ GIRVN +S   + T ++  G  D   +         L+   +  + + N A +L
Sbjct: 174 ADLGKEGIRVNAISAGPIRT-LAASGIGDFRKMLKENEANAPLR-RNVTIEEVGNTAAFL 231

Query: 239 ASDESSYVSGQNLVVDGGFSVV 260
            SD SS ++G+ + VD G+ ++
Sbjct: 232 LSDLSSGITGEIIYVDSGYHIM 253

Length = 259

>gnl|CDD|187630 cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP) reductase (ENR), divergent SDR

 Score = 93.4 bits (233), Expect = 1e-22
 Identities = 76/266 (28%), Positives = 125/266 (46%), Gaps = 37/266 (13%)

Query: 15  GKVAIITGGAS--GIGAMAVELFHENGAKVVI---ADVQDKLGEDLADKLGQDVCYIHCD 69
           GK  +ITG A+   I     +  HE GA++      +   K  E LA++LG+    + CD
Sbjct: 1   GKRILITGIANDRSIAWGIAKALHEAGAELAFTYQPEALRKRVEKLAERLGESALVLPCD 60

Query: 70  ISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRS--FGSILDTPKSDLERLINVNTIGGF 127
           +SN++E+  L       +GKLD + ++     +    G  LDT +    + ++++     
Sbjct: 61  VSNDEEIKELFAEVKKDWGKLDGLVHSIAFAPKVQLKGPFLDTSRKGFLKALDISAYS-L 119

Query: 128 LG-AKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGL--------VKCLA 178
           +  AK A  +M P          S  T ++ LGS    +  Y ++G+        V+ LA
Sbjct: 120 VSLAKAALPIMNPG--------GSIVT-LSYLGS-ERVVPGYNVMGVAKAALESSVRYLA 169

Query: 179 AELGQYGIRVNCVS--PY-GLATGMSMKGGVDPALIES-SMSQMGNLKGEFLKTDGIANA 234
            ELG+ GIRVN +S  P   LA   S   G D  L  S   + +G      +  + + N 
Sbjct: 170 YELGRKGIRVNAISAGPIKTLA--ASGITGFDKMLEYSEQRAPLGRN----VTAEEVGNT 223

Query: 235 ALYLASDESSYVSGQNLVVDGGFSVV 260
           A +L SD SS ++G+ + VDGG+ ++
Sbjct: 224 AAFLLSDLSSGITGEIIYVDGGYHIM 249

This bacterial subgroup of ENRs includes Escherichia coli ENR. ENR catalyzes the NAD(P)H-dependent reduction of enoyl-ACP in the last step of fatty acid biosynthesis. De novo fatty acid biosynthesis is catalyzed by the fatty acid synthetase complex, through the serial addition of 2-carbon subunits. In bacteria and plants,ENR catalyzes one of six synthetic steps in this process. Oilseed rape ENR, and also apparently the NADH-specific form of Escherichia coli ENR, is tetrameric. Although similar to the classical SDRs, this group does not have the canonical catalytic tetrad, nor does it have the typical Gly-rich NAD-binding pattern. Such so-called divergent SDRs have a GXXXXXSXA NAD-binding motif and a YXXMXXXK (or YXXXMXXXK) active site motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional

 Score = 91.6 bits (228), Expect = 7e-22
 Identities = 67/197 (34%), Positives = 97/197 (49%), Gaps = 15/197 (7%)

Query: 15  GKVAIITGGASGIGAMAVELFHENGAKVV-IADVQDKLGEDLADKLGQDVCYIHCDISNE 73
            KV  ITG + G G    E   E G +VV  A     L  DLA+K G  +  +  D+++ 
Sbjct: 3   EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATL-ADLAEKYGDRLLPLALDVTDR 61

Query: 74  DEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHA 133
             V   V+TAV  FG+LDI+ NNAG     FG I +  +S+    I+ N    F GA   
Sbjct: 62  AAVFAAVETAVEHFGRLDIVVNNAGYG--LFGMIEEVTESEARAQIDTN----FFGALWV 115

Query: 134 ARVMVP----QQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVN 189
            + ++P    Q+ G I+  +S     A   S  Y  SK+ + G+ + LA E+ ++GI+V 
Sbjct: 116 TQAVLPYLREQRSGHIIQISSIGGISAFPMSGIYHASKWALEGMSEALAQEVAEFGIKVT 175

Query: 190 CVSPYGLAT---GMSMK 203
            V P G +T   G S K
Sbjct: 176 LVEPGGYSTDWAGTSAK 192

Length = 275

>gnl|CDD|181120 PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 92.2 bits (229), Expect = 7e-22
 Identities = 84/267 (31%), Positives = 120/267 (44%), Gaps = 46/267 (17%)

Query: 13  LEGKVAIITGGASGIG-AMAVELFHENGAKVVIADVQDKL-GEDLADK---LGQDVCYIH 67
           L GKVA++TG A+G+G A A+ L    GA VV+ DV   L   D+ D+    G     + 
Sbjct: 10  LSGKVAVVTGAAAGLGRAEALGL-ARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVA 68

Query: 68  CDISNEDEVINLVDTAVSKFGKLDIMYNNAGIL-DRSFGSILDTPKSDLERLINVNTIGG 126
            DIS       LV TAV   G LDI+ NNAGI  DR   ++ D    + + +I V+  G 
Sbjct: 69  GDISQRATADELVATAVG-LGGLDIVVNNAGITRDRMLFNMSD---EEWDAVIAVHLRGH 124

Query: 127 FLGAKHAARVMVPQQK-------GCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAA 179
           FL  ++AA     + K       G I+ T+S    +  +G   Y  +K GI  L    A 
Sbjct: 125 FLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVGQANYGAAKAGITALTLSAAR 184

Query: 180 ELGQYGIRVNCVSPYGLATGMS----------MKGGVDPALIESSMSQMGNLKGEFLKTD 229
            LG+YG+R N + P    T M+            GG+DP                 L  +
Sbjct: 185 ALGRYGVRANAICPRA-RTAMTADVFGDAPDVEAGGIDP-----------------LSPE 226

Query: 230 GIANAALYLASDESSYVSGQNLVVDGG 256
            +     +LAS  ++ V+GQ  +V G 
Sbjct: 227 HVVPLVQFLASPAAAEVNGQVFIVYGP 253

Length = 306

>gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional

 Score = 90.1 bits (224), Expect = 2e-21
 Identities = 77/278 (27%), Positives = 119/278 (42%), Gaps = 53/278 (19%)

Query: 13  LEGKVAIITGGASGIGAMAVELFHENGAKVVI--------ADVQDKLGEDLADKLGQDVC 64
           LEG+VA++TGG+SGIG   VEL  E GA V I        A  + +L E         + 
Sbjct: 6   LEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPG---ARLL 62

Query: 65  YIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSIL-DTPKSDLERLINVNT 123
              CD+ +E +V        ++FG +D++ NNAG   +   S   DT        + +  
Sbjct: 63  AARCDVLDEADVAAFAAAVEARFGGVDMLVNNAG---QGRVSTFADTTDDAWRDELELK- 118

Query: 124 IGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGS-----P-----AYTISKYGILGL 173
              +    +  R  +P  +      ASA   I  + S     P     A + ++ G+L L
Sbjct: 119 ---YFSVINPTRAFLPLLR------ASAAASIVCVNSLLALQPEPHMVATSAARAGLLNL 169

Query: 174 VKCLAAELGQYGIRVNCVSPYGLATGMSMKG------------GVDPALIESSMSQMGNL 221
           VK LA EL   G+RVN      +  G+   G            G       +++++   +
Sbjct: 170 VKSLATELAPKGVRVN-----SILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGI 224

Query: 222 K-GEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFS 258
             G   + D  A A  +LAS  SSY +G ++ V GGF+
Sbjct: 225 PLGRLGRPDEAARALFFLASPLSSYTTGSHIDVSGGFA 262

Length = 265

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score = 88.6 bits (220), Expect = 3e-21
 Identities = 53/229 (23%), Positives = 93/229 (40%), Gaps = 17/229 (7%)

Query: 16  KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLG--QDVCYIHCDISNE 73
           KVA++TG + GIG         +G +V +        EDLA       DV  +  D  + 
Sbjct: 1   KVALVTGASRGIGIEIARALARDGYRVSLGLRN---PEDLAALSASGGDVEAVPYDARDP 57

Query: 74  DEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHA 133
           ++   LVD    +FG++D++ +NAGI      ++ +   ++LE   ++N I      +  
Sbjct: 58  EDARALVDALRDRFGRIDVLVHNAGIGRP--TTLREGSDAELEAHFSINVIAPAELTRAL 115

Query: 134 ARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSP 193
              +     G ++F  S   +    G+  Y+ SK+ +  L   L  E   +G+RV+ V P
Sbjct: 116 LPALREAGSGRVVFLNSLSGKRVLAGNAGYSASKFALRALAHALRQEGWDHGVRVSAVCP 175

Query: 194 YGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDE 242
                     G VD  + +           E ++   IAN    +    
Sbjct: 176 ----------GFVDTPMAQGLTLVGAFPPEEMIQPKDIANLVRMVIELP 214

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs

 Score = 89.1 bits (221), Expect = 4e-21
 Identities = 62/241 (25%), Positives = 105/241 (43%), Gaps = 20/241 (8%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVI-ADVQDKLGEDLADKL----GQDVCYI 66
           R  G+VA++TG + GIGA       ++G KVV  A   DK+ E LA +        +   
Sbjct: 3   RWRGRVALVTGASVGIGAAVARALVQHGMKVVGCARRVDKI-EALAAECQSAGYPTLFPY 61

Query: 67  HCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGG 126
            CD+SNE++++++     ++   +D+  NNAG+       +L       + + +VN +  
Sbjct: 62  QCDLSNEEQILSMFSAIRTQHQGVDVCINNAGLARPEP--LLSGKTEGWKEMFDVNVLAL 119

Query: 127 FLGAKHAARVM--VPQQKGCILFTASACTEIAGLGSPA--YTISKYGILGLVKCLAAEL- 181
            +  + A + M       G I+   S         S    Y  +K+ +  L + L  EL 
Sbjct: 120 SICTREAYQSMKERNVDDGHIININSMSGHRVPPVSVFHFYAATKHAVTALTEGLRQELR 179

Query: 182 -GQYGIRVNCVSPYGLATGMSMK-GGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLA 239
             +  IR   +SP  + T  + K    DP    ++   +  LK E      +ANA LY+ 
Sbjct: 180 EAKTHIRATSISPGLVETEFAFKLHDNDPEKAAATYESIPCLKPE-----DVANAVLYVL 234

Query: 240 S 240
           S
Sbjct: 235 S 235

Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|180300 PRK05875, PRK05875, short chain dehydrogenase; Provisional

 Score = 89.5 bits (222), Expect = 4e-21
 Identities = 71/250 (28%), Positives = 114/250 (45%), Gaps = 10/250 (4%)

Query: 13  LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQ-DKLGEDLADKLGQ-----DVCYI 66
            + +  ++TGG SGIG          GA V+I     DKL    A+++        V Y 
Sbjct: 5   FQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLA-AAAEEIEALKGAGAVRYE 63

Query: 67  HCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGG 126
             D+++ED+V   VD A +  G+L  + + AG    + G I         R +++N  G 
Sbjct: 64  PADVTDEDQVARAVDAATAWHGRLHGVVHCAG-GSETIGPITQIDSDAWRRTVDLNVNGT 122

Query: 127 FLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGI 186
               KHAAR +V    G  +  +S           AY ++K  +  L+K  A ELG   +
Sbjct: 123 MYVLKHAARELVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMKLAADELGPSWV 182

Query: 187 RVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYV 246
           RVN + P  + T +       P L  S+  +         + + +AN A++L SD +S++
Sbjct: 183 RVNSIRPGLIRTDLVAPITESPEL--SADYRACTPLPRVGEVEDVANLAMFLLSDAASWI 240

Query: 247 SGQNLVVDGG 256
           +GQ + VDGG
Sbjct: 241 TGQVINVDGG 250

Length = 276

>gnl|CDD|235713 PRK06139, PRK06139, short chain dehydrogenase; Provisional

 Score = 90.2 bits (224), Expect = 5e-21
 Identities = 59/192 (30%), Positives = 92/192 (47%), Gaps = 6/192 (3%)

Query: 11  KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLAD---KLGQDVCYIH 67
             L G V +ITG +SGIG    E F   GA++V+A   ++  + +A+    LG +V  + 
Sbjct: 3   GPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVP 62

Query: 68  CDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGF 127
            D+++ D+V  L   A S  G++D+  NN G+   + G   +TP    E++I  N IG  
Sbjct: 63  TDVTDADQVKALATQAASFGGRIDVWVNNVGV--GAVGRFEETPIEAHEQVIQTNLIGYM 120

Query: 128 LGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQY-GI 186
             A  A  +   Q  G  +   S     A   + AY+ SK+G+ G  + L  EL  +  I
Sbjct: 121 RDAHAALPIFKKQGHGIFINMISLGGFAAQPYAAAYSASKFGLRGFSEALRGELADHPDI 180

Query: 187 RVNCVSPYGLAT 198
            V  V P  + T
Sbjct: 181 HVCDVYPAFMDT 192

Length = 330

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score = 88.1 bits (219), Expect = 7e-21
 Identities = 62/230 (26%), Positives = 95/230 (41%), Gaps = 19/230 (8%)

Query: 18  AIITGGASGIGAMAVELFHENGAKVVIADVQDKLG-EDLADKLGQD--VCYIHCDISNE- 73
            +ITG + GIG   V      G   VIA  +D     +LA        +  +  D+++E 
Sbjct: 1   VLITGASRGIGLELVRQLLARGNNTVIATCRDPSAATELAALGASHSRLHILELDVTDEI 60

Query: 74  DEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHA 133
            E    V         LD++ NNAGIL  S+G   +    DL  +  VN +G  L  +  
Sbjct: 61  AESAEAV-AERLGDAGLDVLINNAGILH-SYGPASEVDSEDLLEVFQVNVLGPLLLTQAF 118

Query: 134 ARVMVPQQKGCILFTASAC---TEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNC 190
             +++   +  I+  +S      +    G  +Y  SK  +  L K LA EL + GI V  
Sbjct: 119 LPLLLKGARAKIINISSRVGSIGDNTSGGWYSYRASKAALNMLTKSLAVELKRDGITVVS 178

Query: 191 VSPYGLATGMSMKGGVDPALI--ESSMSQM----GNLK----GEFLKTDG 230
           + P  + T M      +   I  E S++ +     NL     G+FL  DG
Sbjct: 179 LHPGWVRTDMGGPFAKNKGPITPEESVAGLLKVIDNLNEEDSGKFLDYDG 228

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|236207 PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 89.5 bits (223), Expect = 3e-20
 Identities = 78/262 (29%), Positives = 121/262 (46%), Gaps = 44/262 (16%)

Query: 13  LEGKVAIITGGASGIGAMAVELFHENGAKVVIADV---QDKLGEDLADKLGQDVCYIHCD 69
           L GKVA++TG A GIGA   E+   +GA VV  DV    + L   +A+++G     +  D
Sbjct: 208 LAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAA-VANRVGGTA--LALD 264

Query: 70  ISNEDEVINLVDTAVSKFGKLDIMYNNAGIL-DRSFGSILDTPKSDLERLINVNTIG--- 125
           I+  D    + +    + G LDI+ +NAGI  D++  + +D  + D   ++ VN +    
Sbjct: 265 ITAPDAPARIAEHLAERHGGLDIVVHNAGITRDKTLAN-MDEARWDS--VLAVNLLAPLR 321

Query: 126 ---GFLGAKH---AARVMVPQQKGCILFTASACTEIAG-LGSPAYTISKYGILGLVKCLA 178
                L A       R++       +   +     IAG  G   Y  SK G++GLV+ LA
Sbjct: 322 ITEALLAAGALGDGGRIV------GVSSISG----IAGNRGQTNYAASKAGVIGLVQALA 371

Query: 179 AELGQYGIRVNCVSPYGLATGMSMKGGVDPALIE-----SSMSQMGNLKGEFLKTDGIAN 233
             L + GI +N V+P  + T M+    +  A  E     +S+ Q G      L  D +A 
Sbjct: 372 PLLAERGITINAVAPGFIETQMTAA--IPFATREAGRRMNSLQQGG------LPVD-VAE 422

Query: 234 AALYLASDESSYVSGQNLVVDG 255
              +LAS  S  V+G  + V G
Sbjct: 423 TIAWLASPASGGVTGNVVRVCG 444

Length = 450

>gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs

 Score = 86.4 bits (214), Expect = 4e-20
 Identities = 73/260 (28%), Positives = 131/260 (50%), Gaps = 29/260 (11%)

Query: 13  LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQ--DVCYIHCDI 70
           + GK+ ++TGG+ GIG M  + F E GA+V+I+  + +   D A++L    +   I  D+
Sbjct: 4   VAGKIVLVTGGSRGIGRMIAQGFLEAGARVIISARKAEACADAAEELSAYGECIAIPADL 63

Query: 71  SNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDT-PKSDLERLINVNTIGGFL- 128
           S+E+ +  LV     +  +LD++ NNAG    ++G+ L+  P+S  ++++++N    F  
Sbjct: 64  SSEEGIEALVARVAERSDRLDVLVNNAGA---TWGAPLEAFPESGWDKVMDINVKSVFFL 120

Query: 129 ------------GAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKC 176
                        A++ ARV        I   + A   ++GL + +Y  SK  +  L + 
Sbjct: 121 TQALLPLLRAAATAENPARV--------INIGSIAGIVVSGLENYSYGASKAAVHQLTRK 172

Query: 177 LAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAAL 236
           LA EL    I VN ++P    + M+     DPA +E+    +    G + + + +A  A+
Sbjct: 173 LAKELAGEHITVNAIAPGRFPSKMTAFLLNDPAALEAEEKSIP--LGRWGRPEDMAGLAI 230

Query: 237 YLASDESSYVSGQNLVVDGG 256
            LAS   +Y++G  + VDGG
Sbjct: 231 MLASRAGAYLTGAVIPVDGG 250

Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 85.5 bits (212), Expect = 9e-20
 Identities = 70/258 (27%), Positives = 122/258 (47%), Gaps = 25/258 (9%)

Query: 13  LEGKVAIITGGASGIG-AMAVELFHENGAKVVIADVQDKLGE-----DLADKLGQDVCYI 66
           L+ KV ++TG   GIG A+AV L  E G+ VV+ + + +  E      +  + G +   +
Sbjct: 4   LKDKVVVVTGSGRGIGRAIAVRLAKE-GSLVVV-NAKKRAEEMNETLKMVKENGGEGIGV 61

Query: 67  HCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGG 126
             D+S  +    L    + ++G  DI+ NNAG+    F   L+     +++ I+ +    
Sbjct: 62  LADVSTREGCETLAKATIDRYGVADILVNNAGL--GLFSPFLNVDDKLIDKHISTDFKSV 119

Query: 127 FLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYG-----ILGLVKCLAAEL 181
              ++  A+ M  ++ G I+  AS    +AG+  PAY +S YG     ++ L K LA EL
Sbjct: 120 IYCSQELAKEM--REGGAIVNIAS----VAGI-RPAYGLSIYGAMKAAVINLTKYLALEL 172

Query: 182 GQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASD 241
               IRVN ++P  + T +         + E   ++   L G+ L  + +A     +   
Sbjct: 173 APK-IRVNAIAPGFVKTKLGESLFKVLGMSEKEFAEKFTLMGKILDPEEVAEFVAAILKI 231

Query: 242 ESSYVSGQNLVVDGGFSV 259
           ES  ++GQ  V+D G S+
Sbjct: 232 ES--ITGQVFVLDSGESL 247

Length = 252

>gnl|CDD|180413 PRK06128, PRK06128, oxidoreductase; Provisional

 Score = 85.7 bits (212), Expect = 1e-19
 Identities = 79/266 (29%), Positives = 112/266 (42%), Gaps = 22/266 (8%)

Query: 2   NGPSSAAPFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVI-------ADVQDKLGED 54
           +G  S   F RL+G+ A+ITG  SGIG      F   GA + +        D  + +   
Sbjct: 42  HGEQSYKGFGRLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVV--Q 99

Query: 55  LADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSD 114
           L    G+    +  D+ +E     LV+ AV + G LDI+ N AG    +   I D     
Sbjct: 100 LIQAEGRKAVALPGDLKDEAFCRQLVERAVKELGGLDILVNIAG-KQTAVKDIADITTEQ 158

Query: 115 LERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLV 174
            +     N    F   K A   + P     I+ T S  +         Y  +K  I+   
Sbjct: 159 FDATFKTNVYAMFWLCKAAIPHLPP--GASIINTGSIQSYQPSPTLLDYASTKAAIVAFT 216

Query: 175 KCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDG--IA 232
           K LA ++ + GIRVN V+P  + T +   GG  P  I    S+        +K  G  + 
Sbjct: 217 KALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQPPEKIPDFGSETP------MKRPGQPVE 270

Query: 233 NAALY--LASDESSYVSGQNLVVDGG 256
            A LY  LAS ESSYV+G+   V GG
Sbjct: 271 MAPLYVLLASQESSYVTGEVFGVTGG 296

Length = 300

>gnl|CDD|187663 cd09762, HSDL2_SDR_c, human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 84.8 bits (210), Expect = 1e-19
 Identities = 84/268 (31%), Positives = 125/268 (46%), Gaps = 53/268 (19%)

Query: 13  LEGKVAIITGGASGIG-AMAVELFHENGAKVVI----ADVQDKL-------GEDLADKLG 60
           L GK   ITG + GIG A+A++   + GA VVI    A+   KL        E++    G
Sbjct: 1   LAGKTLFITGASRGIGKAIALKAARD-GANVVIAAKTAEPHPKLPGTIYTAAEEIEAAGG 59

Query: 61  QDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLIN 120
           + +  I  DI +ED+V   V+ AV KFG +DI+ NNA  +  S    LDTP    + ++ 
Sbjct: 60  KALPCI-VDIRDEDQVRAAVEKAVEKFGGIDILVNNASAI--SLTGTLDTPMKRYDLMMG 116

Query: 121 VNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSP------------AYTISKY 168
           VNT G +L     ++  +P  K       S    I  L  P            AYT++KY
Sbjct: 117 VNTRGTYL----CSKACLPYLKK------SKNPHILNLSPPLNLNPKWFKNHTAYTMAKY 166

Query: 169 GILGLVKCLAAELGQYGIRVNCVSP-YGLATG-MSMKGGVDPALIESSMSQMGNLKGEFL 226
           G+   V  +A E    GI VN + P   +AT  M+M GGVD     ++  +         
Sbjct: 167 GMSMCVLGMAEEFKPGGIAVNALWPRTAIATAAMNMLGGVD----VAACCR--------- 213

Query: 227 KTDGIANAALYLASDESSYVSGQNLVVD 254
           K + +A+AA  + +  SS  +G  L+ +
Sbjct: 214 KPEIMADAAYAILTKPSSEFTGNFLIDE 241

This subgroup includes human HSDL2 and related protens. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional

 Score = 84.4 bits (209), Expect = 2e-19
 Identities = 76/268 (28%), Positives = 132/268 (49%), Gaps = 38/268 (14%)

Query: 13  LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQ-DKLGEDLAD--KLGQDVCYIHCD 69
           LEGKVA++TG +SG+GA   ++  + GAKVV+A  + ++L E  A+    G     +  D
Sbjct: 7   LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLD 66

Query: 70  ISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLG 129
           +++   +   V  A ++ G +DI+ NN+G+   +   ++D   +D + + + NT G F  
Sbjct: 67  VTDYQSIKAAVAHAETEAGTIDILVNNSGV--STTQKLVDVTPADFDFVFDTNTRGAFFV 124

Query: 130 AKHAARVMVPQQKGC--------ILFTASACTEIAGLGS----PAYTISKYGILGLVKCL 177
           A+  A+ M+ + KG         I+  AS    +AGL        Y +SK  ++ + + +
Sbjct: 125 AQEVAKRMIARAKGAGNTKPGGRIINIAS----VAGLRVLPQIGLYCMSKAAVVHMTRAM 180

Query: 178 AAELGQYGIRVNCVSPYGLATGM-----SMKGGVDPALIESSMSQMGNLK--GEFLKTDG 230
           A E G++GI VN + P  + T +       + G         +  M   K  G+    DG
Sbjct: 181 ALEWGRHGINVNAICPGYIDTEINHHHWETEQG-------QKLVSMLPRKRVGKPEDLDG 233

Query: 231 IANAALYLASDESSYVSGQNLVVDGGFS 258
           +    L LA+DES +++G  +  D GF 
Sbjct: 234 L---LLLLAADESQFINGAIISADDGFG 258

Length = 258

>gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs

 Score = 83.4 bits (207), Expect = 4e-19
 Identities = 57/196 (29%), Positives = 91/196 (46%), Gaps = 15/196 (7%)

Query: 15  GKVAIITGGASGIG-AMAVELFHENGAKVVIADVQDKLGE---DLADKLGQDVCYIHCDI 70
           G  A++TG   GIG A A EL       ++I+  Q+KL     ++ +K G +   I  D 
Sbjct: 1   GTWAVVTGATDGIGKAYAEELAKRGFNVILISRTQEKLDAVAKEIEEKYGVETKTIAADF 60

Query: 71  SNEDEVINLVDTAVSKFGKLDI--MYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFL 128
           S  D++   ++  +     LDI  + NN GI        L+TP+ +L+ +INVN +    
Sbjct: 61  SAGDDIYERIEKELEG---LDIGILVNNVGISHSIPEYFLETPEDELQDIINVNVMATLK 117

Query: 129 GAKHAARVMVPQQKGCILFTASACTEIAGLGSP---AYTISKYGILGLVKCLAAELGQYG 185
             +     MV ++KG I+  +S       + +P    Y+ SK  +    + L  E    G
Sbjct: 118 MTRLILPGMVKRKKGAIVNISSF---AGLIPTPLLATYSASKAFLDFFSRALYEEYKSQG 174

Query: 186 IRVNCVSPYGLATGMS 201
           I V  + PY +AT MS
Sbjct: 175 IDVQSLLPYLVATKMS 190

This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional

 Score = 84.2 bits (209), Expect = 7e-19
 Identities = 57/195 (29%), Positives = 88/195 (45%), Gaps = 11/195 (5%)

Query: 11  KRLEGKVAIITGGASGIGAMAVELFHENGAKVV-IADVQDKLGEDLADKL---GQDVCYI 66
           K +  +V +ITG ++G+G      F   GAKVV +A  ++ L E LA ++   G +   +
Sbjct: 4   KPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGL-EALAAEIRAAGGEALAV 62

Query: 67  HCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGG 126
             D+++ + V    D A  + G +D   NNA +    FG   D    +  R+  V  +G 
Sbjct: 63  VADVADAEAVQAAADRAEEELGPIDTWVNNAMV--TVFGPFEDVTPEEFRRVTEVTYLGV 120

Query: 127 FLGAKHAARVMVPQQKGCILFTASACTEIA-GLGSPAYTISKYGILGLVKCLAAEL--GQ 183
             G   A R M P+ +G I+   SA    +  L S AY  +K+ I G    L  EL    
Sbjct: 121 VHGTLAALRHMRPRDRGAIIQVGSALAYRSIPLQS-AYCAAKHAIRGFTDSLRCELLHDG 179

Query: 184 YGIRVNCVSPYGLAT 198
             + V  V P  + T
Sbjct: 180 SPVSVTMVQPPAVNT 194

Length = 334

>gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional

 Score = 82.6 bits (204), Expect = 9e-19
 Identities = 71/252 (28%), Positives = 122/252 (48%), Gaps = 18/252 (7%)

Query: 16  KVAIITGGASGIGAMAVELFHENGAKVVIADVQD-KLGEDLADKL---GQDVCYIHCDIS 71
            +A++TGG+ GIG     L  + G  V +   Q+    +++ + +   G     +  DIS
Sbjct: 2   AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADIS 61

Query: 72  NEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAK 131
           +E++V+ +          L  + NNAGIL     ++ +     + R+++ N  G FL  +
Sbjct: 62  DENQVVAMFTAIDQHDEPLAALVNNAGILFTQ-CTVENLTAERINRVLSTNVTGYFLCCR 120

Query: 132 HAARVMVPQ---QKGCILFTASACTEIAGLGSPA----YTISKYGILGLVKCLAAELGQY 184
            A + M  +     G I+  +SA +    LG+P     Y  SK  I  L   L+ E+   
Sbjct: 121 EAVKRMALKHGGSGGAIVNVSSAASR---LGAPGEYVDYAASKGAIDTLTTGLSLEVAAQ 177

Query: 185 GIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESS 244
           GIRVNCV P  + T M   GG +P  ++   S +   +G   + + +A A ++L SD++S
Sbjct: 178 GIRVNCVRPGFIYTEMHASGG-EPGRVDRVKSNIPMQRGG--QPEEVAQAIVWLLSDKAS 234

Query: 245 YVSGQNLVVDGG 256
           YV+G  + + GG
Sbjct: 235 YVTGSFIDLAGG 246

Length = 247

>gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional

 Score = 82.0 bits (202), Expect = 2e-18
 Identities = 74/257 (28%), Positives = 127/257 (49%), Gaps = 16/257 (6%)

Query: 11  KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLA----DKLGQDVCYI 66
           K L+GKVA++TG + GIG         +GA V I   ++K   D      +  G     I
Sbjct: 2   KNLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLI 61

Query: 67  HCDISNEDEVINLVDTAVSKF------GKLDIMYNNAGILDRSFGSILDTPKSDLERLIN 120
             D+++ D V  LV+   ++        ++DI+ NNAGI  +  G+I +T +   + ++ 
Sbjct: 62  EADLNSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQ--GTIENTTEEIFDEIMA 119

Query: 121 VNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAE 180
           VN    F   +    ++  + +G ++  +SA   +   GS AY +SK  +  +   LA  
Sbjct: 120 VNIKAPFFLIQQTLPLL--RAEGRVINISSAEVRLGFTGSIAYGLSKGALNTMTLPLAKH 177

Query: 181 LGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLAS 240
           LG+ GI VN + P    T ++ K   DP +   + +   ++ G   + + IA+A  +LAS
Sbjct: 178 LGERGITVNTIMPGYTKTDINAKLLDDPEI--RNFATNSSVFGRIGQVEDIADAVAFLAS 235

Query: 241 DESSYVSGQNLVVDGGF 257
            +S +V+GQ + V GGF
Sbjct: 236 SDSRWVTGQIIDVSGGF 252

Length = 254

>gnl|CDD|181349 PRK08278, PRK08278, short chain dehydrogenase; Provisional

 Score = 82.3 bits (204), Expect = 2e-18
 Identities = 60/198 (30%), Positives = 91/198 (45%), Gaps = 24/198 (12%)

Query: 13  LEGKVAIITGGASGIG-AMAVELFHENGAKVVI----ADVQDKL-------GEDLADKLG 60
           L GK   ITG + GIG A+A+     +GA +VI    A+   KL        E++    G
Sbjct: 4   LSGKTLFITGASRGIGLAIALRA-ARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGG 62

Query: 61  QDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTP--KSDLERL 118
           Q +  +  D+ +ED+V   V  AV +FG +DI  NNA  +  +     DTP  + DL  +
Sbjct: 63  QALP-LVGDVRDEDQVAAAVAKAVERFGGIDICVNNASAI--NLTGTEDTPMKRFDL--M 117

Query: 119 INVNTIGGFLGAKHAARVMVPQQKGCILFTA---SACTEIAGLGSPAYTISKYGILGLVK 175
             +N  G FL ++     +   +   IL  +   +   +       AYT++KYG+     
Sbjct: 118 QQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPKWFA-PHTAYTMAKYGMSLCTL 176

Query: 176 CLAAELGQYGIRVNCVSP 193
            LA E    GI VN + P
Sbjct: 177 GLAEEFRDDGIAVNALWP 194

Length = 273

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score = 81.5 bits (202), Expect = 3e-18
 Identities = 72/257 (28%), Positives = 103/257 (40%), Gaps = 34/257 (13%)

Query: 15  GKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL-----GQDVCYIHCD 69
           GKV +ITG  SGIG        + GA V+IA   ++ GE+ A ++        V  I  D
Sbjct: 1   GKVVVITGANSGIGKETARELAKRGAHVIIACRNEEKGEEAAAEIKKETGNAKVEVIQLD 60

Query: 70  ISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGF-- 127
           +S+   V    +  +++F +LDI+ NNAGI+           K   E    VN +G F  
Sbjct: 61  LSSLASVRQFAEEFLARFPRLDILINNAGIMAPPRR----LTKDGFELQFAVNYLGHFLL 116

Query: 128 -------LGAKHAARVMV----PQQKGCILFTASACTEIAGL-GSPAYTISKYGILGLVK 175
                  L A   +R++       + G I F               AY  SK   +   +
Sbjct: 117 TNLLLPVLKASAPSRIVNVSSIAHRAGPIDFNDLDLENNKEYSPYKAYGQSKLANILFTR 176

Query: 176 CLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGI--AN 233
            LA  L   G+ VN + P  + T +  + G        S   +  L   FLK      A 
Sbjct: 177 ELARRLEGTGVTVNALHPGVVRTELLRRNG--------SFFLLYKLLRPFLKKSPEQGAQ 228

Query: 234 AALYLA-SDESSYVSGQ 249
            ALY A S E   VSG+
Sbjct: 229 TALYAATSPELEGVSGK 245

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional

 Score = 80.5 bits (199), Expect = 7e-18
 Identities = 59/198 (29%), Positives = 93/198 (46%), Gaps = 23/198 (11%)

Query: 16  KVAIITGGASGIGAMAVELFHENGAKVVIADVQ-DKLGEDLAD--KLGQDVC-YIHCDIS 71
           K   +TG ASGIG          GA++ + D   D L + +AD   LG  V  +   DIS
Sbjct: 1   KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDIS 60

Query: 72  NEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAK 131
           + D V        +  G +D++ N AGI   ++G++         R+++VN     +G  
Sbjct: 61  DYDAVAAFAADIHAAHGSMDVVMNIAGI--SAWGTVDRLTHEQWRRMVDVN----LMGPI 114

Query: 132 HAARVMVPQ-----QKGCILFTASACTEIAGL-GSP---AYTISKYGILGLVKCLAAELG 182
           H     VP      + G ++  +SA    AGL   P   AY+ SK+G+ GL + L  +L 
Sbjct: 115 HVIETFVPPMVAAGRGGHLVNVSSA----AGLVALPWHAAYSASKFGLRGLSEVLRFDLA 170

Query: 183 QYGIRVNCVSPYGLATGM 200
           ++GI V+ V P  + T +
Sbjct: 171 RHGIGVSVVVPGAVKTPL 188

Length = 272

>gnl|CDD|183797 PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 77.5 bits (191), Expect = 8e-17
 Identities = 74/267 (27%), Positives = 115/267 (43%), Gaps = 33/267 (12%)

Query: 11  KRLEGKVAIITGG--ASGIGAMAVELFHENGAKV---------------VIADVQDKLGE 53
            +L+ KVA++TG     GIGA   +   E GA +               V  D Q +L E
Sbjct: 2   NQLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQE 61

Query: 54  DLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKS 113
           +L  K G  V  +  D++  D    L++    + G   I+ NNA     +  S L     
Sbjct: 62  EL-LKNGVKVSSMELDLTQNDAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTA--E 118

Query: 114 DLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGL 173
           +L++   VN     L +   AR    +  G I+   S   +   +G  AY  +K  I  L
Sbjct: 119 ELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQGPMVGELAYAATKGAIDAL 178

Query: 174 VKCLAAELGQYGIRVNCVSPYGLATG-MS--MKGGVDPALIESSMSQMGNLKGEFLKTDG 230
              LAAE+   GI VN ++P    TG M+  +K G+ P      M   G +     +   
Sbjct: 179 TSSLAAEVAHLGITVNAINPGPTDTGWMTEEIKQGLLP------MFPFGRIG----EPKD 228

Query: 231 IANAALYLASDESSYVSGQNLVVDGGF 257
            A    +LAS+E+ +++GQ +  +GGF
Sbjct: 229 AARLIKFLASEEAEWITGQIIHSEGGF 255

Length = 256

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score = 76.9 bits (190), Expect = 8e-17
 Identities = 53/201 (26%), Positives = 83/201 (41%), Gaps = 23/201 (11%)

Query: 16  KVAIITGGASGIG-AMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDIS 71
           KVA++TG   GIG  +  +L       V++     + G+   +KL   G  V +   D++
Sbjct: 1   KVALVTGANRGIGFEIVRQLAKSGPGTVILTARDVERGQAAVEKLRAEGLSVRFHQLDVT 60

Query: 72  NEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLE---RLINVNTIGGFL 128
           ++  +    D    K+G LDI+ NNAGI         D      E     +  N    F 
Sbjct: 61  DDASIEAAADFVEEKYGGLDILVNNAGI----AFKGFDDSTPTREQARETMKTN----FF 112

Query: 129 GAKHAARVMVP----QQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQY 184
           G     + ++P       G I+  +S      G  + AY +SK  +  L + LA EL + 
Sbjct: 113 GTVDVTQALLPLLKKSPAGRIVNVSS----GLGSLTSAYGVSKAALNALTRILAKELKET 168

Query: 185 GIRVNCVSPYGLATGMSMKGG 205
           GI+VN   P  + T M     
Sbjct: 169 GIKVNACCPGWVKTDMGGGKA 189

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated

 Score = 76.9 bits (190), Expect = 2e-16
 Identities = 61/195 (31%), Positives = 93/195 (47%), Gaps = 27/195 (13%)

Query: 16  KVAIITGGASGIGAMAVELFHENGAKVVIADVQ-DKLGEDLADKLGQDVCYIHC---DIS 71
           KVA++TG +SGIG          G  V  A  + DK+ EDLA  LG     +H    D++
Sbjct: 4   KVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKM-EDLAS-LG-----VHPLSLDVT 56

Query: 72  NEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAK 131
           +E  +   VDT +++ G++D++ NNAG    S+G+I D P  +  R   VN  G      
Sbjct: 57  DEASIKAAVDTIIAEEGRIDVLVNNAGY--GSYGAIEDVPIDEARRQFEVNLFG------ 108

Query: 132 HAARV-------MVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQY 184
            AAR+       M  Q+ G I+  +S   +I       Y  +K+ + G    L  E+  +
Sbjct: 109 -AARLTQLVLPHMRAQRSGRIINISSMGGKIYTPLGAWYHATKFALEGFSDALRLEVAPF 167

Query: 185 GIRVNCVSPYGLATG 199
           GI V  + P G+ T 
Sbjct: 168 GIDVVVIEPGGIKTE 182

Length = 273

>gnl|CDD|187589 cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid dehydrogenase (3alpha_HSD), classical (c) SDRs

 Score = 76.4 bits (188), Expect = 2e-16
 Identities = 64/277 (23%), Positives = 105/277 (37%), Gaps = 72/277 (25%)

Query: 19  IITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVIN 78
           +ITG ASGIGA   EL  + G  V+  D+++                +  D+S  +    
Sbjct: 3   VITGAASGIGAATAELLEDAGHTVIGIDLRE--------------ADVIADLSTPEGRAA 48

Query: 79  LVDTAVSKFGK-LDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVM 137
            +   +++    LD + N AG+             +    ++ VN    + G +     +
Sbjct: 49  AIADVLARCSGVLDGLVNCAGV----------GGTTVAGLVLKVN----YFGLRALMEAL 94

Query: 138 VP----QQKGCILFTAS--------------------------ACTEIAG-LGSPAYTIS 166
           +P          +  +S                          A  E AG  G  AY  S
Sbjct: 95  LPRLRKGHGPAAVVVSSIAGAGWAQDKLELAKALAAGTEARAVALAEHAGQPGYLAYAGS 154

Query: 167 KYGILGLVKCLAAE-LGQYGIRVNCVSPYGLATGM-----SMKGGVDPALIESSMSQMGN 220
           K  +    +  AA  L   G+RVN V+P  + T +         G     +++ ++ MG 
Sbjct: 155 KEALTVWTRRRAATWLYGAGVRVNTVAPGPVETPILQAFLQDPRG--GESVDAFVTPMGR 212

Query: 221 LKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGF 257
            + E    D IA    +LASD +S+++G NL VDGG 
Sbjct: 213 -RAE---PDEIAPVIAFLASDAASWINGANLFVDGGL 245

Bacterial 3-alpha_HSD, which catalyzes the NAD-dependent oxidoreduction of hydroxysteroids, is a dimeric member of the classical SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|181417 PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 76.3 bits (188), Expect = 2e-16
 Identities = 72/265 (27%), Positives = 119/265 (44%), Gaps = 35/265 (13%)

Query: 13  LEGKVAIITGGASGIGAMAVELFHENGAKVVI-----ADVQDKLGEDLADKLGQDVCYIH 67
           ++GK  +I+GG  GIG   V  F ++G  +        +  +K+ EDL  K G       
Sbjct: 6   MKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYP 65

Query: 68  CDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRS----FGSILDTPKSDLERLINVNT 123
            +I   +    L       F ++D   +NA I  R+    +   +      L   I   T
Sbjct: 66  LNILEPETYKELFKKIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNN-IYTAT 124

Query: 124 IGGFL-GAKHAARVMVPQQKGCILFTASACTEI-----AGLGSPAYTISKYGILGLVKCL 177
           +  F+ GA+ AA+ M     G I+  +S    +     AG G+     SK  +  +VK  
Sbjct: 125 VNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYIENYAGHGT-----SKAAVETMVKYA 179

Query: 178 AAELGQYGIRVNCVSPYGLATGMSMKGGVDPALI------ESSMSQMGNLKGEFLKTDGI 231
           A ELG+  IRVN VS   + T  ++K   +   +       S +++MG         + +
Sbjct: 180 ATELGEKNIRVNAVSGGPIDTD-ALKAFTNYEEVKAKTEELSPLNRMGQ-------PEDL 231

Query: 232 ANAALYLASDESSYVSGQNLVVDGG 256
           A A L+L S+++S+++GQ +VVDGG
Sbjct: 232 AGACLFLCSEKASWLTGQTIVVDGG 256

Length = 260

>gnl|CDD|181113 PRK07775, PRK07775, short chain dehydrogenase; Provisional

 Score = 75.9 bits (187), Expect = 4e-16
 Identities = 57/231 (24%), Positives = 104/231 (45%), Gaps = 13/231 (5%)

Query: 18  AIITGGASGIG-AMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNE 73
           A++ G +SGIG A A+EL    G  V +   + +  E+L DK+   G +      D+++ 
Sbjct: 13  ALVAGASSGIGAATAIEL-AAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDP 71

Query: 74  DEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHA 133
           D V + V  A    G+++++ + AG  D  FG + +      E  + ++ +G    A   
Sbjct: 72  DSVKSFVAQAEEALGEIEVLVSGAG--DTYFGKLHEISTEQFESQVQIHLVGANRLATAV 129

Query: 134 ARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSP 193
              M+ +++G ++F  S           AY  +K G+  +V  L  EL   G+R + V P
Sbjct: 130 LPGMIERRRGDLIFVGSDVALRQRPHMGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHP 189

Query: 194 YGLATGMSMKGGVDPALIESSM---SQMGNLK-GEFLKTDGIANAALYLAS 240
               TGM     +   +I   +   ++ G  +   FL+   +A A  ++A 
Sbjct: 190 GPTLTGMGWS--LPAEVIGPMLEDWAKWGQARHDYFLRASDLARAITFVAE 238

Length = 274

>gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6

 Score = 75.1 bits (185), Expect = 4e-16
 Identities = 48/203 (23%), Positives = 90/203 (44%), Gaps = 15/203 (7%)

Query: 18  AIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQD---VCYIHCDISNED 74
            +ITG +SGIG      F + G  V +A  +    ++L  +L      V     D+++E+
Sbjct: 1   VLITGASSGIGRALAREFAKAGYNVALAARRTDRLDELKAELLNPNPSVEVEILDVTDEE 60

Query: 75  EVINLVDTAVSKFGKLDIMYNNAGILDRSFG-SILDTPKSDLERLINVNTIGGFLGAKHA 133
               ++    ++ G LD++  NAG+     G S+ D         I+ N +G     + A
Sbjct: 61  RNQLVIAELEAELGGLDLVIINAGV---GKGTSLGDLSFKAFRETIDTNLLGAAAILEAA 117

Query: 134 ARVMVPQQKGCILFTASACTEIAGL----GSPAYTISKYGILGLVKCLAAELGQYGIRVN 189
                 + +G ++  +S    +A L    G+ AY+ SK  +  L + L  ++ + GIRV 
Sbjct: 118 LPQFRAKGRGHLVLISS----VAALRGLPGAAAYSASKAALSSLAESLRYDVKKRGIRVT 173

Query: 190 CVSPYGLATGMSMKGGVDPALIE 212
            ++P  + T ++      P L+ 
Sbjct: 174 VINPGFIDTPLTANMFTMPFLMS 196

These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|181188 PRK07985, PRK07985, oxidoreductase; Provisional

 Score = 76.2 bits (187), Expect = 4e-16
 Identities = 77/259 (29%), Positives = 118/259 (45%), Gaps = 28/259 (10%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIA-------DVQDKLGEDLADKLGQDVC 64
           RL+ + A++TGG SGIG  A   +   GA V I+       D QD   + + ++ G+   
Sbjct: 46  RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDV--KKIIEECGRKAV 103

Query: 65  YIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTI 124
            +  D+S+E    +LV  A    G LDIM   AG    +   I D      ++   +N  
Sbjct: 104 LLPGDLSDEKFARSLVHEAHKALGGLDIMALVAG-KQVAIPDIADLTSEQFQKTFAINVF 162

Query: 125 GGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPA---YTISKYGILGLVKCLAAEL 181
             F   + A  ++    KG  + T S+    A   SP    Y  +K  IL   + LA ++
Sbjct: 163 ALFWLTQEAIPLL---PKGASIITTSSIQ--AYQPSPHLLDYAATKAAILNYSRGLAKQV 217

Query: 182 GQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDG----IANAALY 237
            + GIRVN V+P  + T + + GG      +  + Q G  +   +K  G    +A   +Y
Sbjct: 218 AEKGIRVNIVAPGPIWTALQISGGQT----QDKIPQFG--QQTPMKRAGQPAELAPVYVY 271

Query: 238 LASDESSYVSGQNLVVDGG 256
           LAS ESSYV+ +   V GG
Sbjct: 272 LASQESSYVTAEVHGVCGG 290

Length = 294

>gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional

 Score = 74.5 bits (184), Expect = 7e-16
 Identities = 65/250 (26%), Positives = 111/250 (44%), Gaps = 29/250 (11%)

Query: 13  LEGKVAIITGGASGIGAMAVELFHENGAKVV-IADVQDKLGEDLADKL----GQDVCYIH 67
           L+ ++ ++TG   GIG  A   +  +GA V+ +   ++KL E + D++    G     I 
Sbjct: 10  LKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKL-EAVYDEIEAAGGPQPAIIP 68

Query: 68  CDISN--EDEVINLVDTAVSKFGKLDIMYNNAGIL-DRSFGSILDTPKSDLERLINVNTI 124
            D+          L DT   +FG+LD + +NAG+L +   G +        + ++ VN  
Sbjct: 69  LDLLTATPQNYQQLADTIEEQFGRLDGVLHNAGLLGEL--GPMEQQDPEVWQDVMQVNVN 126

Query: 125 GGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQY 184
             F+  +    +++      ++FT+S+          AY +SK+   G+++ LA E    
Sbjct: 127 ATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRANWGAYAVSKFATEGMMQVLADEYQGT 186

Query: 185 GIRVNCVSPYGLATGMSMKG--GVDPALIESSMSQMGNLKGEFLKT-DGIANAALYLASD 241
            +RVNC++P G  T M      G DP                 LKT + I    LYL  D
Sbjct: 187 NLRVNCINPGGTRTAMRASAFPGEDPQK---------------LKTPEDIMPLYLYLMGD 231

Query: 242 ESSYVSGQNL 251
           +S   +GQ+ 
Sbjct: 232 DSRRKNGQSF 241

Length = 247

>gnl|CDD|187664 cd09763, DHRS1-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs

 Score = 74.8 bits (184), Expect = 8e-16
 Identities = 58/193 (30%), Positives = 97/193 (50%), Gaps = 15/193 (7%)

Query: 13  LEGKVAIITGGASGIG-AMAVELFHENGAKVVIA--DVQDKL---GEDLADKLGQDVCYI 66
           L GK+A++TG + GIG  +A++L  E GA V I    +  +L    E++  + G+ +  +
Sbjct: 1   LSGKIALVTGASRGIGRGIALQL-GEAGATVYITGRTILPQLPGTAEEIEARGGKCIP-V 58

Query: 67  HCDISNEDEVINLVD-TAVSKFGKLDIMYNNA-----GILDRSFGSILDTPKSDLERLIN 120
            CD S++DEV  L +  A  + G+LDI+ NNA      IL        + P +  + + N
Sbjct: 59  RCDHSDDDEVEALFERVAREQQGRLDILVNNAYAAVQLILVGVAKPFWEEPPTIWDDINN 118

Query: 121 VNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAE 180
           V     +  + +AA +MV   KG I+   S+   +  L + AY + K  I  +   +A E
Sbjct: 119 VGLRAHYACSVYAAPLMVKAGKGLIV-IISSTGGLEYLFNVAYGVGKAAIDRMAADMAHE 177

Query: 181 LGQYGIRVNCVSP 193
           L  +G+ V  + P
Sbjct: 178 LKPHGVAVVSLWP 190

This subgroup includes human DHRS1 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 265

>gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional

 Score = 74.8 bits (184), Expect = 1e-15
 Identities = 56/183 (30%), Positives = 87/183 (47%), Gaps = 8/183 (4%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHC 68
            L GK  ++TG +SGIG  A E F   GA VV    ++ L + +AD++   G D   + C
Sbjct: 37  DLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPC 96

Query: 69  DISNEDEVINLVDTAVSKFGKLDIMYNNAG-ILDRSFGSILDTPKSDLERLINVNTIGGF 127
           D+S+ D V  LV     + G +DI+ NNAG  + R     LD    D+ER + +N     
Sbjct: 97  DLSDLDAVDALVADVEKRIGGVDILINNAGRSIRRPLAESLDR-WHDVERTMVLNYYAPL 155

Query: 128 LGAKHAARVMVPQQKGCILFTAS--ACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYG 185
              +  A  M+ +  G I+  A+    +E + L S  Y  SK  +  + + +  E G  G
Sbjct: 156 RLIRGLAPGMLERGDGHIINVATWGVLSEASPLFS-VYNASKAALSAVSRVIETEWGDRG 214

Query: 186 IRV 188
           +  
Sbjct: 215 VHS 217

Length = 293

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score = 73.5 bits (181), Expect = 1e-15
 Identities = 49/210 (23%), Positives = 82/210 (39%), Gaps = 13/210 (6%)

Query: 13  LEGKVAIITGGASGIGAMAVELFHENGAKVVIAD-VQDKLGEDLADKLGQDVCYIHCDIS 71
           L G   +ITGG SGIG      F E G  V+I    +++L E  A K   ++  I  D+ 
Sbjct: 3   LTGNTVLITGGTSGIGLALARKFLEAGNTVIITGRREERLAE--AKKELPNIHTIVLDVG 60

Query: 72  NEDEVINLVDTAVSKFGKLDIMYNNAGI-LDRSFGSILDTPKSDLERLINVNTIGGFLGA 130
           + + V  L +  +S++  LDI+ NNAGI                 +  I+ N     +G 
Sbjct: 61  DAESVEALAEALLSEYPNLDILINNAGIQRPIDLRDPASDLD-KADTEIDTN----LIGP 115

Query: 131 KHAARVMVP----QQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGI 186
               +  +P    Q +  I+  +S    +    +P Y  +K  +      L  +L   G+
Sbjct: 116 IRLIKAFLPHLKKQPEATIVNVSSGLAFVPMAANPVYCATKAALHSYTLALRHQLKDTGV 175

Query: 187 RVNCVSPYGLATGMSMKGGVDPALIESSMS 216
            V  + P  + T +  +           M 
Sbjct: 176 EVVEIVPPAVDTELHEERRNPDGGTPRKMP 205

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|236308 PRK08594, PRK08594, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 73.6 bits (181), Expect = 2e-15
 Identities = 68/274 (24%), Positives = 119/274 (43%), Gaps = 48/274 (17%)

Query: 13  LEGKVAIITGGAS--GIGAMAVELFHENGAKVVIADVQDKLG---EDLADKL-GQDVCYI 66
           LEGK  ++ G A+   I        H  GAK+V     ++L     +LAD L GQ+   +
Sbjct: 5   LEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLL 64

Query: 67  HCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLE-RLINVNTIG 125
            CD+++++E+    +T   + G +  + +           I    K DL    +  +   
Sbjct: 65  PCDVTSDEEITACFETIKEEVGVIHGVAH----------CIAFANKEDLRGEFLETSR-D 113

Query: 126 GFLGAK-----------HAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGL- 173
           GFL A+             A+ ++ +  G I+      T + G       +  Y ++G+ 
Sbjct: 114 GFLLAQNISAYSLTAVAREAKKLMTE-GGSIVTL----TYLGG----ERVVQNYNVMGVA 164

Query: 174 -------VKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFL 226
                  VK LA +LG+ GIRVN +S   + T +S KG      I   + +   L+    
Sbjct: 165 KASLEASVKYLANDLGKDGIRVNAISAGPIRT-LSAKGVGGFNSILKEIEERAPLR-RTT 222

Query: 227 KTDGIANAALYLASDESSYVSGQNLVVDGGFSVV 260
             + + + A +L SD S  V+G+N+ VD G+ ++
Sbjct: 223 TQEEVGDTAAFLFSDLSRGVTGENIHVDSGYHII 256

Length = 257

>gnl|CDD|183719 PRK12747, PRK12747, short chain dehydrogenase; Provisional

 Score = 73.6 bits (180), Expect = 2e-15
 Identities = 73/260 (28%), Positives = 129/260 (49%), Gaps = 28/260 (10%)

Query: 13  LEGKVAIITGGASGIGAMAVELFHENGAKVVI------ADVQDKLGEDLAD-----KLGQ 61
           L+GKVA++TG + GIG    +    +GA V I       + ++ + E  ++      +G 
Sbjct: 2   LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGA 61

Query: 62  DVCYIHCDISNEDEVINLVDTAVSK---FGKLDIMYNNAGILDRSFGSILDTPKSDLERL 118
           ++  +H      + + + +D  +       K DI+ NNAGI   +F  I +T +   +R+
Sbjct: 62  NLESLH----GVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAF--IEETTEQFFDRM 115

Query: 119 INVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLA 178
           ++VN    F   + A   +    +  I+  +SA T I+     AY+++K  I  +   LA
Sbjct: 116 VSVNAKAPFFIIQQALSRLRDNSR--IINISSAATRISLPDFIAYSMTKGAINTMTFTLA 173

Query: 179 AELGQYGIRVNCVSPYGLATGMSMKGGVDPALIE--SSMSQMGNLKGEFLKTDGIANAAL 236
            +LG  GI VN + P  + T M+ +   DP + +  +++S    L GE    + IA+ A 
Sbjct: 174 KQLGARGITVNAILPGFIKTDMNAELLSDPMMKQYATTISAFNRL-GE---VEDIADTAA 229

Query: 237 YLASDESSYVSGQNLVVDGG 256
           +LAS +S +V+GQ + V GG
Sbjct: 230 FLASPDSRWVTGQLIDVSGG 249

Length = 252

>gnl|CDD|236056 PRK07576, PRK07576, short chain dehydrogenase; Provisional

 Score = 73.5 bits (181), Expect = 2e-15
 Identities = 70/264 (26%), Positives = 114/264 (43%), Gaps = 33/264 (12%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKV-VIADVQDKLGEDLADKLGQD------VC 64
              GK  ++ GG SGI     + F   GA V V +  Q+K+ +    +L Q       V 
Sbjct: 6   DFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKV-DAAVAQLQQAGPEGLGVS 64

Query: 65  YIHCDISNEDEVINLVDTAVSKFGKLDIMYNNA---------GILDRSFGSILDTPKSDL 115
               D+ +   V         +FG +D++ + A         G+    F +++D    DL
Sbjct: 65  A---DVRDYAAVEAAFAQIADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDI---DL 118

Query: 116 ERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVK 175
                   +G F   K A  ++  +    I+  ++    +          +K G+  L +
Sbjct: 119 --------LGTFNVLKAAYPLLR-RPGASIIQISAPQAFVPMPMQAHVCAAKAGVDMLTR 169

Query: 176 CLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAA 235
            LA E G  GIRVN + P  +A    M        ++++++Q   LK        IANAA
Sbjct: 170 TLALEWGPEGIRVNSIVPGPIAGTEGMARLAPSPELQAAVAQSVPLK-RNGTKQDIANAA 228

Query: 236 LYLASDESSYVSGQNLVVDGGFSV 259
           L+LASD +SY++G  L VDGG+S+
Sbjct: 229 LFLASDMASYITGVVLPVDGGWSL 252

Length = 264

>gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR

 Score = 73.0 bits (179), Expect = 3e-15
 Identities = 70/258 (27%), Positives = 116/258 (44%), Gaps = 24/258 (9%)

Query: 16  KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL------GQDVCYIHCD 69
           +VA++TG  SGIG        + G +V +     +  E LA  +      G +     CD
Sbjct: 4   EVALVTGATSGIGLAIARRLGKEGLRVFVCA---RGEEGLATTVKELREAGVEADGRTCD 60

Query: 70  ISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDL-ERLINVNTIGGFL 128
           + +  E+  LV  AV+++G +D++ NNAG   RS G        +L   ++  N  G F 
Sbjct: 61  VRSVPEIEALVAAAVARYGPIDVLVNNAG---RSGGGATAELADELWLDVVETNLTGVFR 117

Query: 129 GAKH--AARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGI 186
             K    A  M+ +  G I+  AS   +   + +  Y+ SK+G++G  K L  EL + GI
Sbjct: 118 VTKEVLKAGGMLERGTGRIINIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGI 177

Query: 187 RVNCVSPYGLATGMSMK-----GGVDPALIESSMSQMGNLK---GEFLKTDGIANAALYL 238
            VN V P  + T M+         +     E +  ++   +   G ++  + +A    YL
Sbjct: 178 TVNAVCPGFVETPMAASVREHYADIWEVSTEEAFDRI-TARVPLGRYVTPEEVAGMVAYL 236

Query: 239 ASDESSYVSGQNLVVDGG 256
             D ++ V+ Q L V GG
Sbjct: 237 IGDGAAAVTAQALNVCGG 254

Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258

>gnl|CDD|181020 PRK07533, PRK07533, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 72.7 bits (179), Expect = 5e-15
 Identities = 73/273 (26%), Positives = 118/273 (43%), Gaps = 46/273 (16%)

Query: 13  LEGKVAIITGGASG--IGAMAVELFHENGAKVVIADVQDKLG---EDLADKLGQDVCYIH 67
           L GK  ++ G A+   I       F   GA++ +  + DK     E LA++L   + ++ 
Sbjct: 8   LAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPI-FLP 66

Query: 68  CDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLE-RLINVNTIGG 126
            D+    ++  +      ++G+LD + +          SI   PK DL  R+++  +  G
Sbjct: 67  LDVREPGQLEAVFARIAEEWGRLDFLLH----------SIAFAPKEDLHGRVVDC-SREG 115

Query: 127 FLGAK----HA----ARVMVP-QQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKC- 176
           F  A     H+    AR+  P    G  L T S        G+    +  Y ++G VK  
Sbjct: 116 FALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSY------YGA-EKVVENYNLMGPVKAA 168

Query: 177 -------LAAELGQYGIRVNCVSPYGLAT-GMSMKGGVDPALIESSMSQMGNLKGEFLKT 228
                  LAAELG  GIRV+ +SP  L T   S     D AL+E +  +        +  
Sbjct: 169 LESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDFD-ALLEDAAERAP--LRRLVDI 225

Query: 229 DGIANAALYLASDESSYVSGQNLVVDGGFSVVN 261
           D +   A +LASD +  ++G  L +DGG+ +V 
Sbjct: 226 DDVGAVAAFLASDAARRLTGNTLYIDGGYHIVG 258

Length = 258

>gnl|CDD|131732 TIGR02685, pter_reduc_Leis, pteridine reductase

 Score = 72.7 bits (178), Expect = 5e-15
 Identities = 64/271 (23%), Positives = 110/271 (40%), Gaps = 35/271 (12%)

Query: 17  VAIITGGASGIGAMAVELFHENGAKVVI-----ADVQDKLGEDLADKLGQDVCYIHCDIS 71
            A++TG A  IG+      H+ G +VV+     A     L  +L  +          D+S
Sbjct: 3   AAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLS 62

Query: 72  NEDEVIN----LVDTAVSKFGKLDIMYNNAGIL------------DRSFGSILDTPKSDL 115
           N   + +    ++D     FG+ D++ NNA                      L+   ++L
Sbjct: 63  NSATLFSRCEAIIDACFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAEL 122

Query: 116 ERLINVNTIGGFLGAKHAARVMV---PQQKGCILFTASAC---TEIAGLGSPAYTISKYG 169
                 N I  +   K  A+       +Q+   L   + C   T+   LG   YT++K+ 
Sbjct: 123 ---FGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDAMTDQPLLGFTMYTMAKHA 179

Query: 170 ILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTD 229
           + GL +  A EL    IRVN V+P     G+S+     P  ++    +   L       +
Sbjct: 180 LEGLTRSAALELAPLQIRVNGVAP-----GLSLLPDAMPFEVQEDYRRKVPLGQREASAE 234

Query: 230 GIANAALYLASDESSYVSGQNLVVDGGFSVV 260
            IA+  ++L S ++ Y++G  + VDGG S+ 
Sbjct: 235 QIADVVIFLVSPKAKYITGTCIKVDGGLSLT 265

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. Length = 267

>gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs

 Score = 71.8 bits (176), Expect = 6e-15
 Identities = 56/247 (22%), Positives = 99/247 (40%), Gaps = 23/247 (9%)

Query: 13  LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL----GQDVCYIHC 68
           L  ++ ++TG + GIG  A   +   GA V++    ++    +AD +    G+   +   
Sbjct: 2   LNDRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRQVADHINEEGGRQPQWFIL 61

Query: 69  DISN--EDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGG 126
           D+     +    L       + +LD + +NAG+L      + +      + +  VN    
Sbjct: 62  DLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLG-DVCPLSEQNPQVWQDVXQVNVNAT 120

Query: 127 FLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGI 186
           F+  +    +++    G ++FT+S+          AY +SK+   GL + LA E  Q  +
Sbjct: 121 FMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAVSKFATEGLXQVLADEYQQRNL 180

Query: 187 RVNCVSPYGLATGMSMKG--GVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESS 244
           RVNC++P G  T M        DP            LK        I    L+L  D+S 
Sbjct: 181 RVNCINPGGTRTAMRASAFPTEDPQ----------KLK----TPADIMPLYLWLMGDDSR 226

Query: 245 YVSGQNL 251
             +G   
Sbjct: 227 RKTGMTF 233

Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236

>gnl|CDD|181762 PRK09291, PRK09291, short chain dehydrogenase; Provisional

 Score = 71.2 bits (175), Expect = 1e-14
 Identities = 58/195 (29%), Positives = 92/195 (47%), Gaps = 25/195 (12%)

Query: 15  GKVAIITGGASGIG-AMAVELFHENGAKVVIADVQ-----DKLGEDLADKLGQDVCYIHC 68
            K  +ITG  SG G  +A+ L    G  V IA VQ       L  + A + G  +     
Sbjct: 2   SKTILITGAGSGFGREVALRL-ARKGHNV-IAGVQIAPQVTALRAE-AARRGLALRVEKL 58

Query: 69  DISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFL 128
           D+++       +D A +    +D++ NNAGI +   G+++D P   +  L   N  G   
Sbjct: 59  DLTDA------IDRAQAAEWDVDVLLNNAGIGEA--GAVVDIPVELVRELFETNVFGPLE 110

Query: 129 GAKHAARVMVPQQKGCILFTASACTEIAGLGSP----AYTISKYGILGLVKCLAAELGQY 184
             +   R MV + KG ++FT+S    +AGL +     AY  SK+ +  + + + AEL  +
Sbjct: 111 LTQGFVRKMVARGKGKVVFTSS----MAGLITGPFTGAYCASKHALEAIAEAMHAELKPF 166

Query: 185 GIRVNCVSPYGLATG 199
           GI+V  V+P    TG
Sbjct: 167 GIQVATVNPGPYLTG 181

Length = 257

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score = 70.8 bits (174), Expect = 2e-14
 Identities = 62/245 (25%), Positives = 105/245 (42%), Gaps = 41/245 (16%)

Query: 16  KVAIITGGASGIGAMAVELFHENGAKVVI-ADVQDKLGEDLADKLGQDV-CYIHC---DI 70
           K  +ITG +SGIG      F + GAK+++     ++L ++LAD+LG      +     D+
Sbjct: 1   KTVLITGASSGIGEATARRFAKAGAKLILTGRRAERL-QELADELGAKFPVKVLPLQLDV 59

Query: 71  SNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGA 130
           S+ + +   ++    +F  +DI+ NNAG L        +    D E +I+ N  G     
Sbjct: 60  SDRESIEAALENLPEEFRDIDILVNNAG-LALGLDPAQEADLEDWETMIDTNVKGLLNVT 118

Query: 131 KHAARVMVPQQKGCILFTASACTEIAG----LGSPAYTISKYGILGLVKCLAAELGQYGI 186
           +    +M+ + +G I+   S    IAG     G   Y  +K  +      L  +L   GI
Sbjct: 119 RLILPIMIARNQGHIINLGS----IAGRYPYAGGNVYCATKAAVRQFSLNLRKDLIGTGI 174

Query: 187 RVNCVSPYGLATGMSMKGGVDPALIESSMSQM---GN-------LKG-EFLKTDGIANAA 235
           RV                 ++P L+E+  S +   G+        +G E L  + IA   
Sbjct: 175 RVT---------------NIEPGLVETEFSLVRFHGDKEKADKVYEGVEPLTPEDIAETI 219

Query: 236 LYLAS 240
           L++AS
Sbjct: 220 LWVAS 224

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 72.7 bits (179), Expect = 2e-14
 Identities = 53/189 (28%), Positives = 81/189 (42%), Gaps = 25/189 (13%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVI-ADVQDKLGE---DLADKLGQDVCYIH 67
            L GKV +ITG +SGIG        E GA V + A   + L E   ++  K G    Y  
Sbjct: 368 PLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAY-T 426

Query: 68  CDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSF-GSILDTPKS--DLERLINVNTI 124
           CD+++   V + V   +++ G +D + NNAG   RS   S+ ++     D ER + VN  
Sbjct: 427 CDLTDSAAVDHTVKDILAEHGHVDYLVNNAG---RSIRRSVENSTDRFHDYERTMAVNYF 483

Query: 125 GGFLGAKHAARV-------MVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCL 177
           G       A R+       M  ++ G ++  +S   +       AY  SK  +       
Sbjct: 484 G-------AVRLILGLLPHMRERRFGHVVNVSSIGVQTNAPRFSAYVASKAALDAFSDVA 536

Query: 178 AAELGQYGI 186
           A+E    GI
Sbjct: 537 ASETLSDGI 545

Length = 657

>gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional

 Score = 70.7 bits (174), Expect = 3e-14
 Identities = 51/194 (26%), Positives = 85/194 (43%), Gaps = 35/194 (18%)

Query: 14  EGKVAIITGGASGIGAMAVELFHENGAKVV-----IADVQDKLGEDLADKLGQDVCYIHC 68
             KVA++TG +SGIG    E     G +V       A      G          V  +  
Sbjct: 3   NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPIPG----------VELLEL 52

Query: 69  DISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFL 128
           D++++  V   VD  +++ G++D++ NNAG+     G+  ++  +  + L + N      
Sbjct: 53  DVTDDASVQAAVDEVIARAGRIDVLVNNAGV--GLAGAAEESSIAQAQALFDTN----VF 106

Query: 129 GAKHAARVMVP----QQKGCILFTASACTEIAGLGSPA-----YTISKYGILGLVKCLAA 179
           G     R ++P    Q  G I+  +S    + G   PA     Y  SK+ + G  + L  
Sbjct: 107 GILRMTRAVLPHMRAQGSGRIINISS----VLGF-LPAPYMALYAASKHAVEGYSESLDH 161

Query: 180 ELGQYGIRVNCVSP 193
           E+ Q+GIRV+ V P
Sbjct: 162 EVRQFGIRVSLVEP 175

Length = 270

>gnl|CDD|171822 PRK12938, PRK12938, acetyacetyl-CoA reductase; Provisional

 Score = 70.0 bits (171), Expect = 3e-14
 Identities = 68/251 (27%), Positives = 115/251 (45%), Gaps = 20/251 (7%)

Query: 16  KVAIITGGASGIGAMAVELFHENGAKVVI-----ADVQDKLGEDLADKLGQDVCYIHCDI 70
           ++A +TGG  GIG    +  H++G KVV      +  + K  ED    LG D      ++
Sbjct: 4   RIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLED-QKALGFDFIASEGNV 62

Query: 71  SNEDEVINLVDTAVSKFGKLDIMYNNAGIL-DRSFGSILDTPKSDLERLINVNTIGGFLG 129
            + D      D   ++ G++D++ NNAGI  D  F  +    + D   +I+ N    F  
Sbjct: 63  GDWDSTKAAFDKVKAEVGEIDVLVNNAGITRDVVFRKM---TREDWTAVIDTNLTSLFNV 119

Query: 130 AKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVN 189
            K     MV +  G I+  +S   +    G   Y+ +K GI G    LA E+   G+ VN
Sbjct: 120 TKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVN 179

Query: 190 CVSPYGLATGM--SMKGGVDPALIES-SMSQMGNLKGEFLKTDGIANAALYLASDESSYV 246
            VSP  + T M  +++  V   ++ +  + ++G         D I +   +LAS+ES + 
Sbjct: 180 TVSPGYIGTDMVKAIRPDVLEKIVATIPVRRLG-------SPDEIGSIVAWLASEESGFS 232

Query: 247 SGQNLVVDGGF 257
           +G +  ++GG 
Sbjct: 233 TGADFSLNGGL 243

Length = 246

>gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated

 Score = 69.9 bits (172), Expect = 3e-14
 Identities = 54/197 (27%), Positives = 81/197 (41%), Gaps = 8/197 (4%)

Query: 13  LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISN 72
           ++GKV ++TG   GIG   VE     GA  V A  +D    +    LG  V  +  D+++
Sbjct: 4   IKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDP---ESVTDLGPRVVPLQLDVTD 60

Query: 73  EDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKH 132
              V    + A      + I+ NNAGI  R+   +L+  +  L   +  N  G    A+ 
Sbjct: 61  PASVAAAAEAA----SDVTILVNNAGIF-RTGSLLLEGDEDALRAEMETNYFGPLAMARA 115

Query: 133 AARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVS 192
            A V+     G I+   S  + +       Y+ SK     L + L AEL   G RV  V 
Sbjct: 116 FAPVLAANGGGAIVNVLSVLSWVNFPNLGTYSASKAAAWSLTQALRAELAPQGTRVLGVH 175

Query: 193 PYGLATGMSMKGGVDPA 209
           P  + T M+       A
Sbjct: 176 PGPIDTDMAAGLDAPKA 192

Length = 238

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score = 69.6 bits (171), Expect = 7e-14
 Identities = 53/198 (26%), Positives = 83/198 (41%), Gaps = 15/198 (7%)

Query: 14  EGKVAIITGGASGIG-AMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISN 72
             K  +ITG +SG G A+A          V     +     D              D+++
Sbjct: 3   SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAAR-ADFEALHPDRALARLLDVTD 61

Query: 73  EDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKH 132
            D +  +V  A + FG +D++ NNAG      G+I ++P +++ R   VN  G     K 
Sbjct: 62  FDAIDAVVADAEATFGPIDVLVNNAGY--GHEGAIEESPLAEMRRQFEVNVFGAVAMTKA 119

Query: 133 AARVMVPQQKGCILFTASACTEIAGL----GSPAYTISKYGILGLVKCLAAELGQYGIRV 188
               M  +++G I+      T + GL    G   Y  SK+ + G+ + LA E+  +GI V
Sbjct: 120 VLPGMRARRRGHIV----NITSMGGLITMPGIGYYCGSKFALEGISESLAKEVAPFGIHV 175

Query: 189 NCVSPYGLAT---GMSMK 203
             V P    T   G SM 
Sbjct: 176 TAVEPGSFRTDWAGRSMV 193

Length = 277

>gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional

 Score = 67.3 bits (165), Expect = 3e-13
 Identities = 49/212 (23%), Positives = 91/212 (42%), Gaps = 13/212 (6%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVI-ADVQDKLGEDLADKL--GQDVCYIHC 68
            L+ K  ++TG + GIG    E     GA++++     +KL E LA +L       ++  
Sbjct: 2   DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKL-EALAARLPYPGRHRWVVA 60

Query: 69  DISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFL 128
           D+++E      V     + G ++++ NNAG+    F  + D     +ERL+ +N      
Sbjct: 61  DLTSEAG-REAVLARAREMGGINVLINNAGV--NHFALLEDQDPEAIERLLALNLTAPMQ 117

Query: 129 GAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRV 188
             +    ++  Q    ++   S    I   G  +Y  SK+ + G  + L  EL   G+RV
Sbjct: 118 LTRALLPLLRAQPSAMVVNVGSTFGSIGYPGYASYCASKFALRGFSEALRRELADTGVRV 177

Query: 189 NCVSPYGLATGMSMKGGVDPALIESSMSQMGN 220
             ++P    T M      +   +++    +GN
Sbjct: 178 LYLAPRATRTAM------NSEAVQALNRALGN 203

Length = 263

>gnl|CDD|183716 PRK12744, PRK12744, short chain dehydrogenase; Provisional

 Score = 67.1 bits (164), Expect = 4e-13
 Identities = 49/190 (25%), Positives = 75/190 (39%), Gaps = 15/190 (7%)

Query: 13  LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADK-------LGQDVCY 65
           L+GKV +I GGA  +G +        GAK V         +  A++        G     
Sbjct: 6   LKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVA 65

Query: 66  IHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIG 125
              D++    V  L D A + FG+ DI  N  G + +    I++  +++ + +  VN+  
Sbjct: 66  FQADLTTAAAVEKLFDDAKAAFGRPDIAINTVGKVLKK--PIVEISEAEYDEMFAVNSKS 123

Query: 126 GFLGAKHAARVMVPQQKGCILFTA--SACTEIAGLGSPAYTISKYGILGLVKCLAAELGQ 183
            F   K A R +    K   L T+   A T        AY  SK  +    +  + E G 
Sbjct: 124 AFFFIKEAGRHLNDNGKIVTLVTSLLGAFTP----FYSAYAGSKAPVEHFTRAASKEFGA 179

Query: 184 YGIRVNCVSP 193
            GI V  V P
Sbjct: 180 RGISVTAVGP 189

Length = 257

>gnl|CDD|130890 TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-protein) reductase, putative

 Score = 65.7 bits (160), Expect = 1e-12
 Identities = 66/250 (26%), Positives = 126/250 (50%), Gaps = 26/250 (10%)

Query: 19  IITGGASGIG-AMAVELFHENGAKVVI------ADVQDKLGEDLADKLGQDVCYIHCDIS 71
           ++TG + GIG A+A  L   +G ++ +      +D +  +    A   G +   +  D++
Sbjct: 2   LVTGASRGIGRAIANRL-AADGFEICVHYHSGRSDAESVVSAIQA--QGGNARLLQFDVA 58

Query: 72  NEDEVINLVDTAVSKFGKLDIMYNNAGIL-DRSFGSILDTPKSDLERLINVNTIGGFLGA 130
           +      L++  +++ G    +  NAGI  D +F ++ +    D + +I+ N + GF   
Sbjct: 59  DRVACRTLLEADIAEHGAYYGVVLNAGITRDAAFPALSE---EDWDIVIHTN-LDGFYNV 114

Query: 131 KHAARV-MVPQQKGCILFTASACTEIAG-LGSPAYTISKYGILGLVKCLAAELGQYGIRV 188
            H   + M+  ++G  + T ++ + + G  G   Y+ +K G++G  K LA EL +  I V
Sbjct: 115 IHPCTMPMIRARQGGRIITLASVSGVMGNRGQVNYSAAKAGLIGATKALAVELAKRKITV 174

Query: 189 NCVSPYGLATGM--SMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYV 246
           NC++P  + T M   ++  +D AL    M++MG       +   +A+ A +L SD +SYV
Sbjct: 175 NCIAPGLIDTEMLAEVEHDLDEALKTVPMNRMG-------QPAEVASLAGFLMSDGASYV 227

Query: 247 SGQNLVVDGG 256
           + Q + V+GG
Sbjct: 228 TRQVISVNGG 237

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|235813 PRK06482, PRK06482, short chain dehydrogenase; Provisional

 Score = 66.3 bits (162), Expect = 1e-12
 Identities = 55/185 (29%), Positives = 87/185 (47%), Gaps = 14/185 (7%)

Query: 15  GKVAIITGGASGIGAMAVELFHENGAKVVIADVQ--DKLGEDLADKLGQDVCYIHCDISN 72
            K   ITG +SG G    E     G +V  A V+  D L +DL  + G  +  +  D+++
Sbjct: 2   SKTWFITGASSGFGRGMTERLLARGDRVA-ATVRRPDAL-DDLKARYGDRLWVLQLDVTD 59

Query: 73  EDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKH 132
              V  +VD A +  G++D++ +NAG     FG+  +   + + R I+ N IG       
Sbjct: 60  SAAVRAVVDRAFAALGRIDVVVSNAGY--GLFGAAEELSDAQIRRQIDTNLIGSI----Q 113

Query: 133 AARVMVP----QQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRV 188
             R  +P    Q  G I+  +S   +IA  G   Y  +K+GI G V+ +A E+  +GI  
Sbjct: 114 VIRAALPHLRRQGGGRIVQVSSEGGQIAYPGFSLYHATKWGIEGFVEAVAQEVAPFGIEF 173

Query: 189 NCVSP 193
             V P
Sbjct: 174 TIVEP 178

Length = 276

>gnl|CDD|237189 PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 65.1 bits (159), Expect = 2e-12
 Identities = 60/266 (22%), Positives = 102/266 (38%), Gaps = 33/266 (12%)

Query: 13  LEGKVAIITGGA--SGIGAMAVELFHENGAKVVI-----------ADVQDK----LGEDL 55
           L  K+A++TG +  +GIGA         G  +               + DK    L E++
Sbjct: 3   LMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEI 62

Query: 56  ADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDL 115
               G    ++  D+S       +      + G   I+ NNA     ++ +     +   
Sbjct: 63  ESY-GVRCEHMEIDLSQPYAPNRVFYAVSERLGDPSILINNA-----AYSTHTRLEELTA 116

Query: 116 ERL---INVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILG 172
           E+L     VN     L +   A+    +  G I+   S  +        AY  +K  I  
Sbjct: 117 EQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGPMPDELAYAATKGAIEA 176

Query: 173 LVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIA 232
             K LA EL + GI VN V+P     G +  G +   L    + +    +G   +    A
Sbjct: 177 FTKSLAPELAEKGITVNAVNP-----GPTDTGWITEELKHHLVPKF--PQGRVGEPVDAA 229

Query: 233 NAALYLASDESSYVSGQNLVVDGGFS 258
               +L S+E+ +++GQ +  +GGFS
Sbjct: 230 RLIAFLVSEEAKWITGQVIHSEGGFS 255

Length = 256

>gnl|CDD|235608 PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 64.4 bits (157), Expect = 3e-12
 Identities = 61/249 (24%), Positives = 114/249 (45%), Gaps = 20/249 (8%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQ--DVCYIHCD 69
           RL+GK   I G + G+G        + GA+V I    +   + +   L +  ++ Y+  D
Sbjct: 2   RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGD 61

Query: 70  ISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPK--SDLERLINVNTIGGF 127
           +S+ +   N+++ A      +D +    G      G + DT +  S LE ++  N I   
Sbjct: 62  VSSTESARNVIEKAAKVLNAIDGLVVTVG------GYVEDTVEEFSGLEEMLT-NHIKIP 114

Query: 128 LGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIR 187
           L A +A+   + +    +L ++ +    A     +Y ++K G+   V+ LA+EL   GIR
Sbjct: 115 LYAVNASLRFLKEGSSIVLVSSMSGIYKASPDQLSYAVAKAGLAKAVEILASELLGRGIR 174

Query: 188 VNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVS 247
           VN ++P        + G  +P   E +  ++  L  +    +  A   ++L +DE+ +V 
Sbjct: 175 VNGIAPTT------ISGDFEP---ERNWKKLRKLGDDMAPPEDFAKVIIWLLTDEADWVD 225

Query: 248 GQNLVVDGG 256
           G  + VDGG
Sbjct: 226 GVVIPVDGG 234

Length = 238

>gnl|CDD|180949 PRK07370, PRK07370, enoyl-(acyl carrier protein) reductase; Validated

 Score = 64.0 bits (156), Expect = 5e-12
 Identities = 67/266 (25%), Positives = 118/266 (44%), Gaps = 33/266 (12%)

Query: 13  LEGKVAIITGGAS--GIGAMAVELFHENGAKVVIADVQDKLG------EDLADKLGQDVC 64
           L GK A++TG A+   I     +  H  GA++ I  + D+ G       +L + L   + 
Sbjct: 4   LTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSL- 62

Query: 65  YIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRS--FGSILDTPKSDLERLINVN 122
           ++ CD+ ++ ++    +T   K+GKLDI+ +      +    G    T +    R + ++
Sbjct: 63  FLPCDVQDDAQIEETFETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEIS 122

Query: 123 TIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKC------ 176
                   K A  +M   + G I+        +  LG     I  Y ++G+ K       
Sbjct: 123 AYSLAPLCKAAKPLM--SEGGSIV-------TLTYLGG-VRAIPNYNVMGVAKAALEASV 172

Query: 177 --LAAELGQYGIRVNCVSPYGLAT-GMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIAN 233
             LAAELG   IRVN +S   + T   S  GG+   +    + +   L+    +T+ + N
Sbjct: 173 RYLAAELGPKNIRVNAISAGPIRTLASSAVGGILDMI--HHVEEKAPLRRTVTQTE-VGN 229

Query: 234 AALYLASDESSYVSGQNLVVDGGFSV 259
            A +L SD +S ++GQ + VD G+ +
Sbjct: 230 TAAFLLSDLASGITGQTIYVDAGYCI 255

Length = 258

>gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

 Score = 63.8 bits (156), Expect = 6e-12
 Identities = 47/197 (23%), Positives = 80/197 (40%), Gaps = 20/197 (10%)

Query: 16  KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVC-----YIHCDI 70
           K  +ITG  SG G +  +     G  V +A    K G   A +L + VC      +  D+
Sbjct: 1   KAVLITGCDSGFGNLLAKKLDSLGFTV-LAGCLTKNGPG-AKEL-RRVCSDRLRTLQLDV 57

Query: 71  SNEDEVINLVDTAVSKFGKLDI--MYNNAGILDRSFGSILD-TPKSDLERLINVNTIGGF 127
           +  +++           G+  +  + NNAGIL   FG   +  P  D  + + VN     
Sbjct: 58  TKPEQIKRAAQWVKEHVGEKGLWGLVNNAGIL--GFGGDEELLPMDDYRKCMEVN----L 111

Query: 128 LGAKHAARVMVP---QQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQY 184
            G     +  +P   + KG ++  +S    +      AY  SK  +      L  EL  +
Sbjct: 112 FGTVEVTKAFLPLLRRAKGRVVNVSSMGGRVPFPAGGAYCASKAAVEAFSDSLRRELQPW 171

Query: 185 GIRVNCVSPYGLATGMS 201
           G++V+ + P    TG++
Sbjct: 172 GVKVSIIEPGNFKTGIT 188

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281

>gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs

 Score = 63.5 bits (155), Expect = 6e-12
 Identities = 58/248 (23%), Positives = 92/248 (37%), Gaps = 28/248 (11%)

Query: 17  VAIITGGASGIG-AMAVELFHENGAKVV--IADVQDKLGEDLADKLGQDVCYIH-CDISN 72
           V I+TG + GIG A+A EL       VV  +A  ++ L E   +            D+S+
Sbjct: 1   VIILTGASRGIGRALAEELLKRGSPSVVVLLARSEEPLQELKEELRPGLRVTTVKADLSD 60

Query: 73  EDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVN------TIGG 126
              V  L++      G+ D++ NNAG L      I      +L++  ++N          
Sbjct: 61  AAGVEQLLEAIRKLDGERDLLINNAGSLG-PVSKIEFIDLDELQKYFDLNLTSPVCLTST 119

Query: 127 FLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGI 186
            L A     +     K  ++  +S        G   Y  SK       + LAAE     +
Sbjct: 120 LLRAFKKRGL-----KKTVVNVSSGAAVNPFKGWGLYCSSKAARDMFFRVLAAEE--PDV 172

Query: 187 RVNCVSPYGLATGMS---MKGGVDPALIE--SSMSQMGNLKGEFLKTDGIANAALYLASD 241
           RV   +P  + T M     +   DP       S+ +    KGE L  +  A     L  +
Sbjct: 173 RVLSYAPGVVDTDMQREIRETSADPETRSRFRSLKE----KGELLDPEQSAEKLANLL-E 227

Query: 242 ESSYVSGQ 249
           +  + SG 
Sbjct: 228 KDKFESGA 235

Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241

>gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7

 Score = 63.2 bits (154), Expect = 6e-12
 Identities = 52/198 (26%), Positives = 83/198 (41%), Gaps = 6/198 (3%)

Query: 13  LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLG-EDLADKLGQDVCYIHCDIS 71
           ++ K  ++TG   GIG   VE    +GAK V A V+D      L  K G  V  +  D++
Sbjct: 1   IKDKTVLVTGANRGIGKAFVESLLAHGAKKVYAAVRDPGSAAHLVAKYGDKVVPLRLDVT 60

Query: 72  NEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAK 131
           + + +      A      +D++ NNAG+L +    + +     L++ ++VN  G    A+
Sbjct: 61  DPESIKAAAAQA----KDVDVVINNAGVL-KPATLLEEGALEALKQEMDVNVFGLLRLAQ 115

Query: 132 HAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCV 191
             A V+     G I+   S  +         Y+ SK     L + L AEL   G  V  V
Sbjct: 116 AFAPVLKANGGGAIVNLNSVASLKNFPAMGTYSASKSAAYSLTQGLRAELAAQGTLVLSV 175

Query: 192 SPYGLATGMSMKGGVDPA 209
            P  + T M+   G    
Sbjct: 176 HPGPIDTRMAAGAGGPKE 193

These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235

>gnl|CDD|169553 PRK08690, PRK08690, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 63.8 bits (155), Expect = 7e-12
 Identities = 65/262 (24%), Positives = 117/262 (44%), Gaps = 26/262 (9%)

Query: 13  LEGKVAIITGGAS--GIGAMAVELFHENGAKVVIADVQDKLGE---DLADKLGQDVCYIH 67
           L+GK  +ITG  S   I     +   E GA++    V DKL E    +A +L  ++ +  
Sbjct: 4   LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVF-R 62

Query: 68  CDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSF--GSILDTPKSDLERLINVNTIG 125
           CD++++DE+  +       +  LD + ++ G   +    G  LD+   +     +  +  
Sbjct: 63  CDVASDDEINQVFADLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAY 122

Query: 126 GFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKC--------L 177
                  AAR M+  +   I+        ++ LG+    I  Y ++G+ K          
Sbjct: 123 SLPALAKAARPMMRGRNSAIV-------ALSYLGA-VRAIPNYNVMGMAKASLEAGIRFT 174

Query: 178 AAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALY 237
           AA LG+ GIR N +S   + T ++  G  D   +   ++    L+   +  + + N A +
Sbjct: 175 AACLGKEGIRCNGISAGPIKT-LAASGIADFGKLLGHVAAHNPLRRN-VTIEEVGNTAAF 232

Query: 238 LASDESSYVSGQNLVVDGGFSV 259
           L SD SS ++G+   VDGG+S+
Sbjct: 233 LLSDLSSGITGEITYVDGGYSI 254

Length = 261

>gnl|CDD|181260 PRK08159, PRK08159, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 63.6 bits (155), Expect = 8e-12
 Identities = 69/262 (26%), Positives = 115/262 (43%), Gaps = 26/262 (9%)

Query: 13  LEGKVAIITGGAS------GIGAMAVELFHENGAKVVIA---DVQDKLGEDLADKLGQDV 63
           + GK  +I G A+      GI           GA++      D   K  E LA +LG  V
Sbjct: 8   MAGKRGLILGVANNRSIAWGIAKAC----RAAGAELAFTYQGDALKKRVEPLAAELGAFV 63

Query: 64  CYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRS--FGSILDTPKSDLERLINV 121
              HCD+++E  +  + +T   K+GKLD + +  G  D+    G  +DT + +    +++
Sbjct: 64  A-GHCDVTDEASIDAVFETLEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDI 122

Query: 122 NTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYT---ISKYGILGLVKCLA 178
           +       A+ A ++M       +  T     ++     P Y    ++K  +   VK LA
Sbjct: 123 SVYSFTAVAQRAEKLM-TDGGSILTLTYYGAEKVM----PHYNVMGVAKAALEASVKYLA 177

Query: 179 AELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYL 238
            +LG   IRVN +S   + T ++  G  D   I         L+   +  + + ++ALYL
Sbjct: 178 VDLGPKNIRVNAISAGPIKT-LAASGIGDFRYILKWNEYNAPLR-RTVTIEEVGDSALYL 235

Query: 239 ASDESSYVSGQNLVVDGGFSVV 260
            SD S  V+G+   VD G+ VV
Sbjct: 236 LSDLSRGVTGEVHHVDSGYHVV 257

Length = 272

>gnl|CDD|180596 PRK06505, PRK06505, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 63.6 bits (155), Expect = 9e-12
 Identities = 74/259 (28%), Positives = 122/259 (47%), Gaps = 20/259 (7%)

Query: 13  LEGKVAIITGGA---SGIGAMAVELFHENGAKVVIADVQDKLG---EDLADKLGQDVCYI 66
           ++GK  +I G A   S    +A +L    GA++      + LG   + LA+ LG D   +
Sbjct: 5   MQGKRGLIMGVANDHSIAWGIAKQL-AAQGAELAFTYQGEALGKRVKPLAESLGSDFV-L 62

Query: 67  HCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRS--FGSILDTPKSDLERLINVNTI 124
            CD+ +   V  + +    K+GKLD + +  G  D++   G   DT + +  R + ++  
Sbjct: 63  PCDVEDIASVDAVFEALEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCF 122

Query: 125 GGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTI---SKYGILGLVKCLAAEL 181
                AK AA++M P     +  T    T +     P Y +   +K  +   V+ LAA+ 
Sbjct: 123 SFTEIAKRAAKLM-PDGGSMLTLTYGGSTRVM----PNYNVMGVAKAALEASVRYLAADY 177

Query: 182 GQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASD 241
           G  GIRVN +S   + T ++  G  D   I S   +   L+   +  D +  +ALYL SD
Sbjct: 178 GPQGIRVNAISAGPVRT-LAGAGIGDARAIFSYQQRNSPLR-RTVTIDEVGGSALYLLSD 235

Query: 242 ESSYVSGQNLVVDGGFSVV 260
            SS V+G+   VD G+++V
Sbjct: 236 LSSGVTGEIHFVDSGYNIV 254

Length = 271

>gnl|CDD|212497 cd11731, Lin1944_like_SDR_c, Lin1944 and related proteins, classical (c) SDRs

 Score = 62.2 bits (152), Expect = 9e-12
 Identities = 56/238 (23%), Positives = 90/238 (37%), Gaps = 41/238 (17%)

Query: 18  AIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVI 77
            I+ G    IG    +L   +G +V+ A      G    D           DI++E  + 
Sbjct: 1   IIVIGATGTIGLAVAQLLSAHGHEVITA------GRSSGD--------YQVDITDEASIK 46

Query: 78  NLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVM 137
            L +      G  D + + AG  D  F  + +   +D +R +N   +G     +H    +
Sbjct: 47  ALFEKV----GHFDAIVSTAG--DAEFAPLAELTDADFQRGLNSKLLGQINLVRHGLPYL 100

Query: 138 VPQQKGCI-LFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGL 196
                G I L +          G+ A T++   + G V+  A EL + GIR+N VS    
Sbjct: 101 ND--GGSITLTSGILAQRPIPGGAAAATVNG-ALEGFVRAAAIELPR-GIRINAVS---- 152

Query: 197 ATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVD 254
                      P ++E S+   G+    F        A  Y+ S E ++  GQ L VD
Sbjct: 153 -----------PGVVEESLEAYGDFFPGFEPVPAEDVAKAYVRSVEGAFT-GQVLHVD 198

Lin1944 protein from Listeria Innocua is a classical SDR, it contains a glycine-rich motif similar to the canonical motif of the SDR NAD(P)-binding site. However, the typical SDR active site residues are absent in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 198

>gnl|CDD|181416 PRK08415, PRK08415, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 62.5 bits (152), Expect = 2e-11
 Identities = 67/268 (25%), Positives = 123/268 (45%), Gaps = 40/268 (14%)

Query: 13  LEGKVAIITGGAS------GIGAMAVELFHENGAKVVIADVQDKLG---EDLADKLGQDV 63
           ++GK  +I G A+      GI         E GA++    + + L    E +A +LG D 
Sbjct: 3   MKGKKGLIVGVANNKSIAYGIAKAC----FEQGAELAFTYLNEALKKRVEPIAQELGSDY 58

Query: 64  CYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSF--GSILDTPKS--DLERLI 119
            Y   D+S  +   +L ++     GK+D + ++     +    GS L+T K   ++   I
Sbjct: 59  VY-ELDVSKPEHFKSLAESLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEI 117

Query: 120 NVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGL------ 173
           +V ++          R ++P     +L   ++   ++ LG   Y +  Y ++G+      
Sbjct: 118 SVYSL------IELTRALLP-----LLNDGASVLTLSYLGGVKY-VPHYNVMGVAKAALE 165

Query: 174 --VKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGI 231
             V+ LA +LG+ GIRVN +S   + T ++  G  D  +I         LK + +  + +
Sbjct: 166 SSVRYLAVDLGKKGIRVNAISAGPIKT-LAASGIGDFRMILKWNEINAPLK-KNVSIEEV 223

Query: 232 ANAALYLASDESSYVSGQNLVVDGGFSV 259
            N+ +YL SD SS V+G+   VD G+++
Sbjct: 224 GNSGMYLLSDLSSGVTGEIHYVDAGYNI 251

Length = 274

>gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional

 Score = 60.9 bits (148), Expect = 5e-11
 Identities = 57/261 (21%), Positives = 107/261 (40%), Gaps = 41/261 (15%)

Query: 13  LEGKVAIITGGASGIGAMAVELFHENGAKVV-IADVQDKLGEDLADKLGQDVCYIHCDIS 71
           +  +  ++TG   GIG          G +V+ IA       +D   +L        CD++
Sbjct: 1   MSSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAI---DDFPGEL------FACDLA 51

Query: 72  NEDEVINLVDTAVSKFGKLDIMYNNAGI-LDRSFGSILDTPKSDLERLINVNTIGGFLGA 130
           + ++    +         +D + NN GI L +  G I     + L+ + ++N        
Sbjct: 52  DIEQTAATLAQINEIHP-VDAIVNNVGIALPQPLGKI---DLAALQDVYDLNVRAAVQVT 107

Query: 131 KHAARVMVPQQKGCILFTASACTEIAGLGSP---AYTISKYGILGLVKCLAAELGQYGIR 187
           +     M  +++G I+   S        G+    +Y+ +K  ++G  +  A EL +YGI 
Sbjct: 108 QAFLEGMKLREQGRIVNICSRAI----FGALDRTSYSAAKSALVGCTRTWALELAEYGIT 163

Query: 188 VNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKT---------DGIANAALYL 238
           VN V+P          G ++  L   +       +   L +         + +A A  +L
Sbjct: 164 VNAVAP----------GPIETELFRQTRPVGSEEEKRVLASIPMRRLGTPEEVAAAIAFL 213

Query: 239 ASDESSYVSGQNLVVDGGFSV 259
            SD++ +++GQ L VDGG S+
Sbjct: 214 LSDDAGFITGQVLGVDGGGSL 234

Length = 234

>gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional

 Score = 60.8 bits (148), Expect = 8e-11
 Identities = 52/194 (26%), Positives = 87/194 (44%), Gaps = 26/194 (13%)

Query: 14  EGKVAIITGGASGIGAM-AVELFHENGAKV---VIA-----DVQDKLGEDLAD-KLGQDV 63
             K+AI+TG +SG G +  +EL     AK    VIA     + Q+ L        L Q++
Sbjct: 2   NKKIAIVTGASSGFGLLTTLEL-----AKKGYLVIATMRNPEKQENLLSQATQLNLQQNI 56

Query: 64  CYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNT 123
                D+++++ + N     + + G++D++ NNAG  +  F  + + P  +  +    N 
Sbjct: 57  KVQQLDVTDQNSIHN-FQLVLKEIGRIDLLVNNAGYANGGF--VEEIPVEEYRKQFETNV 113

Query: 124 IGGFLGAKHAARVMVPQQKGCILFTASACTEIAGL-GSPA---YTISKYGILGLVKCLAA 179
            G     +     M  Q+ G I+  +S    I+G  G P    Y  SKY + G  + L  
Sbjct: 114 FGAISVTQAVLPYMRKQKSGKIINISS----ISGRVGFPGLSPYVSSKYALEGFSESLRL 169

Query: 180 ELGQYGIRVNCVSP 193
           EL  +GI V  + P
Sbjct: 170 ELKPFGIDVALIEP 183

Length = 280

>gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

 Score = 60.1 bits (146), Expect = 9e-11
 Identities = 48/200 (24%), Positives = 82/200 (41%), Gaps = 13/200 (6%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADV-QDKLGEDLADKLGQDVCYIHCDI 70
           +  G   +ITGGASGIG    + F E G  V+I    +++L E  A     ++    CD+
Sbjct: 2   KTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAE--AKAENPEIHTEVCDV 59

Query: 71  SNEDEVINLVDTAVSKFGKLDIMYNNAGIL-DRSFGSILDTPKSDLERLINVNTIGGFLG 129
           ++ D    LV+    ++  L+++ NNAGI  +       D    D E+ I  N     L 
Sbjct: 60  ADRDSRRELVEWLKKEYPNLNVLINNAGIQRNEDLTGAEDLLD-DAEQEIATN----LLA 114

Query: 130 AKHAARVMVP----QQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYG 185
                 +++P    Q +  I+  +S    +    +P Y  +K  I      L  +L    
Sbjct: 115 PIRLTALLLPHLLRQPEATIINVSSGLAFVPMASTPVYCATKAAIHSYTLALREQLKDTS 174

Query: 186 IRVNCVSPYGLATGMSMKGG 205
           + V  ++P  + T       
Sbjct: 175 VEVIELAPPLVDTTEGNTQA 194

Length = 245

>gnl|CDD|180669 PRK06720, PRK06720, hypothetical protein; Provisional

 Score = 58.8 bits (142), Expect = 9e-11
 Identities = 27/91 (29%), Positives = 53/91 (58%), Gaps = 3/91 (3%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADK---LGQDVCYIHC 68
           +L GKVAI+TGG  GIG     L  + GAKV++ D+  + G+   ++   LG +  ++  
Sbjct: 13  KLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSY 72

Query: 69  DISNEDEVINLVDTAVSKFGKLDIMYNNAGI 99
           D+  + +   ++   ++ F ++D+++ NAG+
Sbjct: 73  DMEKQGDWQRVISITLNAFSRIDMLFQNAGL 103

Length = 169

>gnl|CDD|235694 PRK06079, PRK06079, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 59.7 bits (145), Expect = 1e-10
 Identities = 65/260 (25%), Positives = 113/260 (43%), Gaps = 32/260 (12%)

Query: 13  LEGKVAIITGGA--SGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDI 70
           L GK  ++ G A    I     +   + GA V+     D++ + L   + ++   + CD+
Sbjct: 5   LSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQKLVDEEDLLVECDV 64

Query: 71  SNEDEVINLVDTAVSKFGKLD-----IMYNNAGILDRSFGSILDTPKSDLERLINVNTIG 125
           ++++ +     T   + GK+D     I Y     L    G++ DT +       +++   
Sbjct: 65  ASDESIERAFATIKERVGKIDGIVHAIAYAKKEELG---GNVTDTSRDGYALAQDISAYS 121

Query: 126 GFLGAKHAARVMVPQQKGCILFTASACTEIAGLGS----PAYT---ISKYGILGLVKCLA 178
               AK+A  ++ P         AS  T +   GS    P Y    I+K  +   V+ LA
Sbjct: 122 LIAVAKYARPLLNPG--------ASIVT-LTYFGSERAIPNYNVMGIAKAALESSVRYLA 172

Query: 179 AELGQYGIRVNCVSPYGLAT--GMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAAL 236
            +LG+ GIRVN +S   + T     +KG  D  L++   S    + G  +  + + N A 
Sbjct: 173 RDLGKKGIRVNAISAGAVKTLAVTGIKGHKD--LLK--ESDSRTVDGVGVTIEEVGNTAA 228

Query: 237 YLASDESSYVSGQNLVVDGG 256
           +L SD S+ V+G  + VD G
Sbjct: 229 FLLSDLSTGVTGDIIYVDKG 248

Length = 252

>gnl|CDD|236389 PRK09134, PRK09134, short chain dehydrogenase; Provisional

 Score = 58.4 bits (142), Expect = 4e-10
 Identities = 66/265 (24%), Positives = 108/265 (40%), Gaps = 55/265 (20%)

Query: 16  KVAIITGGASGIG-AMAVELFHENGAKVVI--ADVQDKLGEDLADK---LGQDVCYIHCD 69
           + A++TG A  IG A+A++L   +G  V +     +D+  E LA +   LG+    +  D
Sbjct: 10  RAALVTGAARRIGRAIALDL-AAHGFDVAVHYNRSRDE-AEALAAEIRALGRRAVALQAD 67

Query: 70  ISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLG 129
           +++E EV  LV  A +  G + ++ NNA + +    S     ++  +R +  N    F+ 
Sbjct: 68  LADEAEVRALVARASAALGPITLLVNNASLFEYD--SAASFTRASWDRHMATNLRAPFVL 125

Query: 130 AKHAARVMVPQQKGCIL-------------FTASACTEIAGLGSPAYTISKYGILGLVKC 176
           A+  AR +    +G ++             F              +YT+SK  +    + 
Sbjct: 126 AQAFARALPADARGLVVNMIDQRVWNLNPDFL-------------SYTLSKAALWTATRT 172

Query: 177 LAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGN-LKGEFLK----TDGI 231
           LA  L    IRVN + P     G ++  G        S            L      + I
Sbjct: 173 LAQALAPR-IRVNAIGP-----GPTLPSG------RQSPEDFARQHAATPLGRGSTPEEI 220

Query: 232 ANAALYLASDESSYVSGQNLVVDGG 256
           A A  YL    S  V+GQ + VDGG
Sbjct: 221 AAAVRYLLDAPS--VTGQMIAVDGG 243

Length = 258

>gnl|CDD|180343 PRK05993, PRK05993, short chain dehydrogenase; Provisional

 Score = 58.5 bits (142), Expect = 4e-10
 Identities = 54/192 (28%), Positives = 83/192 (43%), Gaps = 22/192 (11%)

Query: 16  KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDE 75
           +  +ITG +SGIGA        +G +V  A  + +  ED+A    + +     D +  + 
Sbjct: 5   RSILITGCSSGIGAYCARALQSDGWRV-FATCRKE--EDVAALEAEGLEAFQLDYAEPES 61

Query: 76  VINLVDTAVSKF-GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAA 134
           +  LV   +    G+LD ++NN G   +  G++ D P   L      N    F G     
Sbjct: 62  IAALVAQVLELSGGRLDALFNN-GAYGQP-GAVEDLPTEALRAQFEAN----FFGWHDLT 115

Query: 135 RVMVP----QQKGCILFTASACTEIAGLGS----PAYTISKYGILGLVKCLAAELGQYGI 186
           R ++P    Q +G I+     C+ I GL       AY  SK+ I GL   L  EL   GI
Sbjct: 116 RRVIPVMRKQGQGRIV----QCSSILGLVPMKYRGAYNASKFAIEGLSLTLRMELQGSGI 171

Query: 187 RVNCVSPYGLAT 198
            V+ + P  + T
Sbjct: 172 HVSLIEPGPIET 183

Length = 277

>gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional

 Score = 58.1 bits (141), Expect = 5e-10
 Identities = 70/261 (26%), Positives = 103/261 (39%), Gaps = 24/261 (9%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIA----DVQDKLGEDLADKLGQDVCYIH 67
            L GK  +ITG + GIGA A E F   G  + +     D  + L  DL    G DV    
Sbjct: 4   HLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHA 63

Query: 68  CDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGF 127
            D+S+ +    L   A    G +DI+ NNAG +    G + D   +       +   G  
Sbjct: 64  LDLSSPEAREQLAAEA----GDIDILVNNAGAIPG--GGLDDVDDAAWRAGWELKVFGYI 117

Query: 128 LGAKHAARVMVPQQK----GCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQ 183
                  R+  P+ K    G I+    A  E         +     ++   + L  +   
Sbjct: 118 ----DLTRLAYPRMKARGSGVIVNVIGAAGENPDADYICGSAGNAALMAFTRALGGKSLD 173

Query: 184 YGIRVNCVSPYGLATG---MSMKGGVDPALIESSMSQ--MGNLKGEFLKT-DGIANAALY 237
            G+RV  V+P  +AT      +KG     L + S  Q  +  L      T + +A+   +
Sbjct: 174 DGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAGLPLGRPATPEEVADLVAF 233

Query: 238 LASDESSYVSGQNLVVDGGFS 258
           LAS  S Y SG  + VDGG S
Sbjct: 234 LASPRSGYTSGTVVTVDGGIS 254

Length = 259

>gnl|CDD|181126 PRK07806, PRK07806, short chain dehydrogenase; Provisional

 Score = 57.4 bits (139), Expect = 8e-10
 Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 6/90 (6%)

Query: 13 LEGKVAIITGGASGIGAMAVELFHENGAKVVI-----ADVQDKLGEDLADKLGQDVCYIH 67
          L GK A++TG + GIGA   ++    GA VV+     A   +K+  ++    G+    + 
Sbjct: 4  LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGR-ASAVG 62

Query: 68 CDISNEDEVINLVDTAVSKFGKLDIMYNNA 97
           D+++E+ V  L+DTA  +FG LD +  NA
Sbjct: 63 ADLTDEESVAALMDTAREEFGGLDALVLNA 92

Length = 248

>gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional

 Score = 57.5 bits (139), Expect = 1e-09
 Identities = 47/187 (25%), Positives = 79/187 (42%), Gaps = 14/187 (7%)

Query: 16  KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDE 75
            V +ITG +SGIG    + F   G +V     +    ED+          +  D+++   
Sbjct: 2   PVVLITGCSSGIGRALADAFKAAGYEVWATARKA---EDVEALAAAGFTAVQLDVNDGAA 58

Query: 76  VINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAAR 135
           +  L +   ++ G LD++ NNAG    + G +LD     + R    N     +G   A  
Sbjct: 59  LARLAEELEAEHGGLDVLINNAGY--GAMGPLLDGGVEAMRRQFETNVF-AVVGVTRALF 115

Query: 136 VMVPQQKGCILFTASA----CTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCV 191
            ++ + +G ++   S      T  AG    AY  SK  +  L   L  EL  +G++V  V
Sbjct: 116 PLLRRSRGLVVNIGSVSGVLVTPFAG----AYCASKAAVHALSDALRLELAPFGVQVMEV 171

Query: 192 SPYGLAT 198
            P  +A+
Sbjct: 172 QPGAIAS 178

Length = 274

>gnl|CDD|235914 PRK07041, PRK07041, short chain dehydrogenase; Provisional

 Score = 55.8 bits (135), Expect = 2e-09
 Identities = 59/246 (23%), Positives = 96/246 (39%), Gaps = 20/246 (8%)

Query: 19  IITGGASGIGAMAVELFHENGAKVVIAD-VQDKLGEDLAD-KLGQDVCYIHCDISNEDEV 76
           ++ GG+SGIG      F   GA+V IA   +D+L         G  V     DI++E   
Sbjct: 1   LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAA- 59

Query: 77  INLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARV 136
              VD   ++ G  D +   A   D   G +   P +  +  ++      F GA   AR 
Sbjct: 60  ---VDAFFAEAGPFDHVVITAA--DTPGGPVRALPLAAAQAAMDSK----FWGAYRVARA 110

Query: 137 MVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGL 196
                 G + F +                    +  L + LA EL    +RVN VSP  +
Sbjct: 111 ARIAPGGSLTFVSGFAAVRPSASGVLQGAINAALEALARGLALELAP--VRVNTVSPGLV 168

Query: 197 ATGMSMKGGVDPALIESSMSQMGNL--KGEFLKTDGIANAALYLASDESSYVSGQNLVVD 254
            T   +   +     E+  +            + + +ANA L+LA   + + +G  ++VD
Sbjct: 169 DT--PLWSKLAGDAREAMFAAAAERLPARRVGQPEDVANAILFLA--ANGFTTGSTVLVD 224

Query: 255 GGFSVV 260
           GG ++V
Sbjct: 225 GGHAIV 230

Length = 230

>gnl|CDD|187619 cd05361, haloalcohol_DH_SDR_c-like, haloalcohol dehalogenase, classical (c) SDRs

 Score = 55.7 bits (134), Expect = 4e-09
 Identities = 54/251 (21%), Positives = 92/251 (36%), Gaps = 23/251 (9%)

Query: 17  VAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEV 76
           +A++T      G  + E   E+G  VV  D       D A++   +         +E + 
Sbjct: 3   IALVTHARHFAGPASAEALTEDGYTVVCHDASFA---DAAERQAFESENPGTKALSEQKP 59

Query: 77  INLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARV 136
             LVD  +   G +D++ +N   + R    I  T ++D+ +     +I  F   + A   
Sbjct: 60  EELVDAVLQAGGAIDVLVSN-DYIPRPMNPIDGTSEADIRQAFEALSIFPFALLQAAIAQ 118

Query: 137 MVPQQKGCILFTASACTEIAGLGS----PAYTISKYGILGLVKCLAAELGQYGIRVNCV- 191
           M     G I+F  SA               Y  ++   + L + LA EL +  I V  + 
Sbjct: 119 MKKAGGGSIIFITSA----VPKKPLAYNSLYGPARAAAVALAESLAKELSRDNILVYAIG 174

Query: 192 -----SPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYV 246
                SP    T        +P L E     +    G   + D +     +LAS  +  +
Sbjct: 175 PNFFNSPTYFPTSDWEN---NPELRERVKRDVP--LGRLGRPDEMGALVAFLASRRADPI 229

Query: 247 SGQNLVVDGGF 257
           +GQ     GG+
Sbjct: 230 TGQFFAFAGGY 240

Dehalogenases cleave carbon-halogen bonds. Haloalcohol dehalogenase show low sequence similarity to short-chain dehydrogenases/reductases (SDRs). Like the SDRs, haloalcohol dehalogenases have a conserved catalytic triad (Ser-Tyr-Lys/Arg), and form a Rossmann fold. However, the normal classical SDR NAD(P)-binding motif (TGXXGXG) and NAD-binding function is replaced with a halide binding site, allowing the enzyme to catalyze a dehalogenation reaction. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|187595 cd05334, DHPR_SDR_c_like, dihydropteridine reductase (DHPR), classical (c) SDRs

 Score = 53.1 bits (128), Expect = 2e-08
 Identities = 42/193 (21%), Positives = 71/193 (36%), Gaps = 16/193 (8%)

Query: 15  GKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNED 74
            +V ++ GG   +G+  V+ F   G  V           DLA+    D   I  D  +  
Sbjct: 1   ARVVLVYGGRGALGSAVVQAFKSRGWWVA--------SIDLAENEEADASIIVLDSDSFT 52

Query: 75  EVIN-LVDTAVSKFGKLDIMYNNAGILDRSFGSILD-TPKSDLERLINVNTIGGFLGAKH 132
           E    +V +     GK+D +   AG    + GS    +   + + +   N    F+ +  
Sbjct: 53  EQAKQVVASVARLSGKVDALICVAGGW--AGGSAKSKSFVKNWDLMWKQNLWTSFIASHL 110

Query: 133 AARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELG--QYGIRVNC 190
           A + +     G ++ T +        G   Y  +K  +  L + LAAE      G   N 
Sbjct: 111 ATKHL--LSGGLLVLTGAKAALEPTPGMIGYGAAKAAVHQLTQSLAAENSGLPAGSTANA 168

Query: 191 VSPYGLATGMSMK 203
           + P  L T  + K
Sbjct: 169 ILPVTLDTPANRK 181

Dihydropteridine reductase is an NAD-binding protein related to the SDRs. It converts dihydrobiopterin into tetrahydrobiopterin, a cofactor necessary in catecholamines synthesis. Dihydropteridine reductase has the YXXXK of these tyrosine-dependent oxidoreductases, but lacks the typical upstream Asn and Ser catalytic residues. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 221

>gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs

 Score = 53.9 bits (130), Expect = 3e-08
 Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 11/111 (9%)

Query: 3   GPSSAAPFKRLEGKVAIITGGASGIGAM-AVELFHENGAKVV------IADVQDKLGEDL 55
           G +++AP K   G V ++TGGA GIG   A  L    GA++V      +   ++   + L
Sbjct: 195 GAAASAPLKP--GGVYLVTGGAGGIGRALARALARRYGARLVLLGRSPLPPEEEWKAQTL 252

Query: 56  A--DKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSF 104
           A  + LG  V YI  D+++   V  L++    ++G +D + + AG+L  + 
Sbjct: 253 AALEALGARVLYISADVTDAAAVRRLLEKVRERYGAIDGVIHAAGVLRDAL 303

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436

>gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional

 Score = 52.2 bits (126), Expect = 4e-08
 Identities = 48/196 (24%), Positives = 80/196 (40%), Gaps = 32/196 (16%)

Query: 16  KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDE 75
             A+ITG + GIGA            ++     ++L ++LA +L         D+++ + 
Sbjct: 4   PTALITGASRGIGAAIARELAPTHTLLLGGRPAERL-DELAAEL-PGATPFPVDLTDPEA 61

Query: 76  VINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGG------FLG 129
           +      AV + G+LD++ +NAG+ D   G + ++   +    + VN +         L 
Sbjct: 62  IA----AAVEQLGRLDVLVHNAGVAD--LGPVAESTVDEWRATLEVNVVAPAELTRLLLP 115

Query: 130 AKHAARVMVPQQKGCILFTASACTEIAGLGSPA----YTISKYGILGLVKCL-AAELGQY 184
           A  AA        G ++F  S     AGL +      Y  SK+ +  L   L   E G  
Sbjct: 116 ALRAAH-------GHVVFINSG----AGLRANPGWGSYAASKFALRALADALREEEPGN- 163

Query: 185 GIRVNCVSPYGLATGM 200
            +RV  V P    T M
Sbjct: 164 -VRVTSVHPGRTDTDM 178

Length = 227

>gnl|CDD|235737 PRK06197, PRK06197, short chain dehydrogenase; Provisional

 Score = 52.7 bits (127), Expect = 4e-08
 Identities = 29/107 (27%), Positives = 52/107 (48%), Gaps = 9/107 (8%)

Query: 1   MNGPSSAAPFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIA--DVQDKLGEDLADK 58
                +AA      G+VA++TG  +G+G          GA VV+A  ++ DK G+  A +
Sbjct: 2   KMTKWTAADIPDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNL-DK-GKAAAAR 59

Query: 59  L-----GQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGIL 100
           +     G DV     D+++   V    D   + + ++D++ NNAG++
Sbjct: 60  ITAATPGADVTLQELDLTSLASVRAAADALRAAYPRIDLLINNAGVM 106

Length = 306

>gnl|CDD|180766 PRK06940, PRK06940, short chain dehydrogenase; Provisional

 Score = 52.3 bits (126), Expect = 5e-08
 Identities = 66/278 (23%), Positives = 110/278 (39%), Gaps = 55/278 (19%)

Query: 16  KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISN 72
           +V ++ G A GIG  A+      G KV++AD  ++  E  A  L   G DV     D+S+
Sbjct: 3   EVVVVIG-AGGIG-QAIARRVGAGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSS 60

Query: 73  EDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKH 132
            + V  L  TA +  G +  + + AG         +   ++  E ++ V+  G  L  + 
Sbjct: 61  RESVKALAATAQT-LGPVTGLVHTAG---------VSPSQASPEAILKVDLYGTALVLEE 110

Query: 133 AARVMVPQQKGCILFTAS---------------ACTEIAGLGS-------------PAYT 164
             +V+ P   G ++ + S               A T    L S              AY 
Sbjct: 111 FGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEELLSLPFLQPDAIEDSLHAYQ 170

Query: 165 ISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGM------SMKGGVDPALIESSMSQM 218
           I+K      V   A + G+ G R+N +SP  ++T +        +G     +   S +  
Sbjct: 171 IAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFAKSPA-- 228

Query: 219 GNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGG 256
               G     D IA  A +L     S+++G + +VDGG
Sbjct: 229 ----GRPGTPDEIAALAEFLMGPRGSFITGSDFLVDGG 262

Length = 275

>gnl|CDD|237099 PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 51.9 bits (125), Expect = 6e-08
 Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 12/81 (14%)

Query: 181 LGQYGIRVNCVSPYGLATGM-----SMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAA 235
            G  GIRVNCV+P  + T +     SM G      ++S   +MG         D  A   
Sbjct: 156 FGARGIRVNCVAPGPVFTPILGDFRSMLG---QERVDSDAKRMGRPA----TADEQAAVL 208

Query: 236 LYLASDESSYVSGQNLVVDGG 256
           ++L SD + +++G NL VDGG
Sbjct: 209 VFLCSDAARWINGVNLPVDGG 229

Length = 241

>gnl|CDD|181187 PRK07984, PRK07984, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 51.8 bits (124), Expect = 8e-08
 Identities = 72/269 (26%), Positives = 120/269 (44%), Gaps = 41/269 (15%)

Query: 13  LEGKVAIITGGAS--GIGAMAVELFHENGAKVVIADVQDKLG---EDLADKLGQDVCYIH 67
           L GK  ++TG AS   I     +  H  GA++      DKL    E+ A +LG D+  + 
Sbjct: 4   LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIV-LP 62

Query: 68  CDISNEDEVINLVDTAVSK-FGKLD-----IMYNNAGILDRSFGSILDTPKSDLERLINV 121
           CD++ ED  I+ +   + K + K D     I +     LD  +              +N 
Sbjct: 63  CDVA-EDASIDAMFAELGKVWPKFDGFVHSIGFAPGDQLDGDY--------------VNA 107

Query: 122 NTIGGFLGAKH-AARVMVPQQKGC--ILFTASACTEIAGLGSPAYTISKYGILGLVKC-- 176
            T  GF  A   ++   V   K C  +L   SA   ++ LG+    I  Y ++GL K   
Sbjct: 108 VTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAER-AIPNYNVMGLAKASL 166

Query: 177 ------LAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDG 230
                 +A  +G  G+RVN +S   + T ++  G  D   + +    +  ++   +  + 
Sbjct: 167 EANVRYMANAMGPEGVRVNAISAGPIRT-LAASGIKDFRKMLAHCEAVTPIR-RTVTIED 224

Query: 231 IANAALYLASDESSYVSGQNLVVDGGFSV 259
           + N+A +L SD S+ +SG+ + VDGGFS+
Sbjct: 225 VGNSAAFLCSDLSAGISGEVVHVDGGFSI 253

Length = 262

>gnl|CDD|169389 PRK08339, PRK08339, short chain dehydrogenase; Provisional

 Score = 51.8 bits (124), Expect = 8e-08
 Identities = 60/255 (23%), Positives = 105/255 (41%), Gaps = 14/255 (5%)

Query: 13  LEGKVAIITGGASGIGAMAVELFHENGAKVVI----ADVQDKLGEDLADKLGQDVCYIHC 68
           L GK+A  T  + GIG     +    GA V++     +   K  E +  +   DV YI  
Sbjct: 6   LSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVA 65

Query: 69  DISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFL 128
           D++  +++   V   +   G+ DI + + G      G  ++    D E  + +       
Sbjct: 66  DLTKREDLERTV-KELKNIGEPDIFFFSTG--GPKPGYFMEMSMEDWEGAVKLLLYPAVY 122

Query: 129 GAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRV 188
             +     M  +  G I+++ S   +          + +  + GLV+ LA ELG  GI V
Sbjct: 123 LTRALVPAMERKGFGRIIYSTSVAIKEPIPNIALSNVVRISMAGLVRTLAKELGPKGITV 182

Query: 189 NCVSPYGLATGMSMKGGVDPA-----LIESSMSQMGN--LKGEFLKTDGIANAALYLASD 241
           N + P  + T   ++   D A      +E ++ +       G   + + I     +LASD
Sbjct: 183 NGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIPLGRLGEPEEIGYLVAFLASD 242

Query: 242 ESSYVSGQNLVVDGG 256
             SY++G  + VDGG
Sbjct: 243 LGSYINGAMIPVDGG 257

Length = 263

>gnl|CDD|236124 PRK07889, PRK07889, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 51.5 bits (124), Expect = 9e-08
 Identities = 68/263 (25%), Positives = 112/263 (42%), Gaps = 28/263 (10%)

Query: 13  LEGKVAIITG--GASGIGAMAVELFHENGAKVVIA--DVQDKLGEDLADKLGQDVCYIHC 68
           LEGK  ++TG    S I      +  E GA+VV+       +L E +A +L +    +  
Sbjct: 5   LEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLEL 64

Query: 69  DISNEDEVINLVDTAVSKFGKLD-----IMYNNAGILDRSFGSILDTPKSDLERLINVNT 123
           D++NE+ + +L D        LD     I +     L  +F   LD P  D+   ++V+ 
Sbjct: 65  DVTNEEHLASLADRVREHVDGLDGVVHSIGFAPQSALGGNF---LDAPWEDVATALHVSA 121

Query: 124 IGGFLGAKHAARVMVPQQKGCIL---FTASACTEIAGLGSPAY---TISKYGILGLVKCL 177
                 AK    +M   + G I+   F A+       +  PAY    ++K  +    + L
Sbjct: 122 YSLKSLAKALLPLM--NEGGSIVGLDFDAT-------VAWPAYDWMGVAKAALESTNRYL 172

Query: 178 AAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALY 237
           A +LG  GIRVN V+   + T ++ K      L+E    +   L  +      +A A + 
Sbjct: 173 ARDLGPRGIRVNLVAAGPIRT-LAAKAIPGFELLEEGWDERAPLGWDVKDPTPVARAVVA 231

Query: 238 LASDESSYVSGQNLVVDGGFSVV 260
           L SD     +G+ + VDGG   +
Sbjct: 232 LLSDWFPATTGEIVHVDGGAHAM 254

Length = 256

>gnl|CDD|187654 cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13 ketoreductase (KR), classical (c)-like SDRs

 Score = 51.0 bits (122), Expect = 1e-07
 Identities = 51/218 (23%), Positives = 81/218 (37%), Gaps = 30/218 (13%)

Query: 4   PSSAAPFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDV 63
             S  P KR+      ITG + G+G  A       G +VV+     K   D         
Sbjct: 1   TRSPPPMKRI-----FITGSSDGLGLAAARTLLHQGHEVVLHARSQKRAADAKAACPGAA 55

Query: 64  CYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNT 123
             +  D+S+  E   L D  V+  G+ D + +NAGIL        DT    +  ++ VN 
Sbjct: 56  GVLIGDLSSLAETRKLADQ-VNAIGRFDAVIHNAGILSGPNRKTPDT---GIPAMVAVNV 111

Query: 124 IGGFLGAKHAARVMVPQQKGCILFTASAC-------------TEIAGLGSPAYTISKYGI 170
           +  ++     A +  P++   +++ +S                      SPAY+ SK  +
Sbjct: 112 LAPYV---LTALIRRPKR---LIYLSSGMHRGGNASLDDIDWFNRGENDSPAYSDSKLHV 165

Query: 171 LGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDP 208
           L L   +A       +  N V P  + T M   G  D 
Sbjct: 166 LTLAAAVARRWKD--VSSNAVHPGWVPTKMGGAGAPDD 201

Daunorubicin is a clinically important therapeutic compound used in some cancer treatments. Daunorubicin C-13 ketoreductase is member of the classical SDR family with a canonical glycine-rich NAD(P)-binding motif, but lacking a complete match to the active site tetrad characteristic of this group. The critical Tyr, plus the Lys and upstream Asn are present, but the catalytic Ser is replaced, generally by Gln. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 260

>gnl|CDD|187670 cd09810, LPOR_like_SDR_c_like, light-dependent protochlorophyllide reductase (LPOR)-like, classical (c)-like SDRs

 Score = 49.8 bits (119), Expect = 5e-07
 Identities = 32/117 (27%), Positives = 49/117 (41%), Gaps = 5/117 (4%)

Query: 16  KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKL-GEDLADKLG---QDVCYIHCDIS 71
              +ITG +SG+G  A +     G   V+   +D L  E  A ++G        +HCD++
Sbjct: 2   GTVVITGASSGLGLAAAKALARRGEWHVVMACRDFLKAEQAAQEVGMPKDSYSVLHCDLA 61

Query: 72  NEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFL 128
           + D V   VD        LD +  NA +   +      T     E  + VN +G FL
Sbjct: 62  SLDSVRQFVDNFRRTGRPLDALVCNAAVYLPTAKEPRFTADG-FELTVGVNHLGHFL 117

Classical SDR-like subgroup containing LPOR and related proteins. Protochlorophyllide (Pchlide) reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 311

>gnl|CDD|187535 cd02266, SDR, Short-chain dehydrogenases/reductases (SDR)

 Score = 48.7 bits (116), Expect = 5e-07
 Identities = 45/197 (22%), Positives = 70/197 (35%), Gaps = 45/197 (22%)

Query: 18  AIITGGASGIG-AMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEV 76
            ++TGG+ GIG A+A  L      KV++                                
Sbjct: 1   VLVTGGSGGIGGAIARWLASRGSPKVLVVS------------------------------ 30

Query: 77  INLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARV 136
                       + D++ +NA ILD   G ++D   S +ER I  N +G     + A  +
Sbjct: 31  ------------RRDVVVHNAAILDD--GRLIDLTGSRIERAIRANVVGTRRLLEAAREL 76

Query: 137 MVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGL 196
           M  ++ G  +  +S        G   Y  SK  + GL +  A+E    G+    V+    
Sbjct: 77  MKAKRLGRFILISSVAGLFGAPGLGGYAASKAALDGLAQQWASEGWGNGLPATAVACGTW 136

Query: 197 ATGMSMKGGVDPALIES 213
           A     KG V P  I  
Sbjct: 137 AGSGMAKGPVAPEEILG 153

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase (KR) domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 186

>gnl|CDD|168626 PRK06603, PRK06603, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 48.9 bits (116), Expect = 7e-07
 Identities = 63/255 (24%), Positives = 118/255 (46%), Gaps = 12/255 (4%)

Query: 13  LEGKVAIITGGAS--GIGAMAVELFHENGAKVVI---ADVQDKLGEDLADKLGQDVCYIH 67
           L+GK  +ITG A+   I     +L  ++GA++     ++V +K  + LA+++G +     
Sbjct: 6   LQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVS-E 64

Query: 68  CDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSF--GSILDTPKSDLERLINVNTIG 125
            D++N   + NL D    K+G  D + +     D++   G  +DT   +    ++++   
Sbjct: 65  LDVTNPKSISNLFDDIKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYS 124

Query: 126 GFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYG 185
               ++ A  +M     G I+       E          ++K  +   VK LA ++G+  
Sbjct: 125 LLELSRSAEALM--HDGGSIVTLTYYGAEKVIPNYNVMGVAKAALEASVKYLANDMGENN 182

Query: 186 IRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSY 245
           IRVN +S   + T  S   G D + +  S +    LK    + D +  AA+YL S+ S  
Sbjct: 183 IRVNAISAGPIKTLASSAIG-DFSTMLKSHAATAPLKRNTTQED-VGGAAVYLFSELSKG 240

Query: 246 VSGQNLVVDGGFSVV 260
           V+G+   VD G++++
Sbjct: 241 VTGEIHYVDCGYNIM 255

Length = 260

>gnl|CDD|187666 cd09806, type1_17beta-HSD-like_SDR_c, human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs

 Score = 48.2 bits (115), Expect = 1e-06
 Identities = 45/189 (23%), Positives = 80/189 (42%), Gaps = 19/189 (10%)

Query: 16  KVAIITGGASGIG-AMAVELFHENGAKV-VIADV-----QDKLGEDLADKLGQDVCYIHC 68
            V +ITG +SGIG  +AV L  +   +  V A +     + +L E      G  +  +  
Sbjct: 1   TVVLITGCSSGIGLHLAVRLASDPSKRFKVYATMRDLKKKGRLWEAAGALAGGTLETLQL 60

Query: 69  DISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFL 128
           D+ +   V   V+        +D++  NAG+     G +    +  +  + +VN  G   
Sbjct: 61  DVCDSKSVAAAVERV--TERHVDVLVCNAGV--GLLGPLEALSEDAMASVFDVNVFGTVR 116

Query: 129 GAKHAARVMVPQQKGCILFTASACTEIAGL-GSP---AYTISKYGILGLVKCLAAELGQY 184
             +     M  +  G IL T+S    + GL G P    Y  SK+ + GL + LA +L  +
Sbjct: 117 MLQAFLPDMKRRGSGRILVTSS----VGGLQGLPFNDVYCASKFALEGLCESLAVQLLPF 172

Query: 185 GIRVNCVSP 193
            + ++ +  
Sbjct: 173 NVHLSLIEC 181

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical SDR subgroup includes human type 1 17beta-HSD, human retinol dehydrogenase 8, zebrafish photoreceptor associated retinol dehydrogenase type 2, and a chicken ovary-specific 17beta-hydroxysteroid dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|181198 PRK08017, PRK08017, oxidoreductase; Provisional

 Score = 47.4 bits (113), Expect = 2e-06
 Identities = 52/185 (28%), Positives = 79/185 (42%), Gaps = 18/185 (9%)

Query: 16  KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLA--DKLGQDVCYIHCDISNE 73
           K  +ITG +SGIG  A       G +V+ A    +  +D+A  + LG     +  D    
Sbjct: 3   KSVLITGCSSGIGLEAALELKRRGYRVLAAC---RKPDDVARMNSLGFTGILLDLDDPES 59

Query: 74  -----DEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFL 128
                DEVI L D       +L  ++NNAG     +G +    +  +E+  + N  G   
Sbjct: 60  VERAADEVIALTD------NRLYGLFNNAGF--GVYGPLSTISRQQMEQQFSTNFFGTHQ 111

Query: 129 GAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRV 188
                   M+P  +G I+ T+S    I+  G  AY  SKY +      L  EL   GI+V
Sbjct: 112 LTMLLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYAASKYALEAWSDALRMELRHSGIKV 171

Query: 189 NCVSP 193
           + + P
Sbjct: 172 SLIEP 176

Length = 256

>gnl|CDD|235736 PRK06196, PRK06196, oxidoreductase; Provisional

 Score = 46.2 bits (110), Expect = 6e-06
 Identities = 23/88 (26%), Positives = 44/88 (50%), Gaps = 1/88 (1%)

Query: 13  LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISN 72
           L GK AI+TGG SG+G        + GA V++   +  +  +    +   V  +  D+++
Sbjct: 24  LSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDG-VEVVMLDLAD 82

Query: 73  EDEVINLVDTAVSKFGKLDIMYNNAGIL 100
            + V    +  +    ++DI+ NNAG++
Sbjct: 83  LESVRAFAERFLDSGRRIDILINNAGVM 110

Length = 315

>gnl|CDD|181324 PRK08251, PRK08251, short chain dehydrogenase; Provisional

 Score = 44.5 bits (106), Expect = 2e-05
 Identities = 58/203 (28%), Positives = 91/203 (44%), Gaps = 16/203 (7%)

Query: 16  KVAIITGGASGIGA-MAVELFHENGAKVVI-ADVQDKLGEDLADKLGQD-----VCYIHC 68
           +  +ITG +SG+GA MA E F   G  + + A   D+L E+L  +L        V     
Sbjct: 3   QKILITGASSGLGAGMARE-FAAKGRDLALCARRTDRL-EELKAELLARYPGIKVAVAAL 60

Query: 69  DISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLER-LINVNTIGGF 127
           D+++ D+V  +      + G LD +  NAGI     G+ L T K    +     N +   
Sbjct: 61  DVNDHDQVFEVFAEFRDELGGLDRVIVNAGI---GKGARLGTGKFWANKATAETNFVAA- 116

Query: 128 LGAKHAARVMVPQQKGCILFTASACTEIAGLGSP--AYTISKYGILGLVKCLAAELGQYG 185
           L    AA  +  +Q    L   S+ + + GL     AY  SK G+  L + L AEL +  
Sbjct: 117 LAQCEAAMEIFREQGSGHLVLISSVSAVRGLPGVKAAYAASKAGVASLGEGLRAELAKTP 176

Query: 186 IRVNCVSPYGLATGMSMKGGVDP 208
           I+V+ + P  + + M+ K    P
Sbjct: 177 IKVSTIEPGYIRSEMNAKAKSTP 199

Length = 248

>gnl|CDD|235910 PRK07024, PRK07024, short chain dehydrogenase; Provisional

 Score = 44.5 bits (106), Expect = 2e-05
 Identities = 52/198 (26%), Positives = 92/198 (46%), Gaps = 33/198 (16%)

Query: 20  ITGGASGIG-AMAVELFHENGAKV-VIADVQDKLGEDLADKLGQDV-CYIHC-DISNEDE 75
           ITG +SGIG A+A E +   GA + ++A   D L +  A +L +     ++  D+ + D 
Sbjct: 7   ITGASSGIGQALARE-YARQGATLGLVARRTDAL-QAFAARLPKAARVSVYAADVRDADA 64

Query: 76  VINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLE---RLINVNTIG------G 126
           +       ++  G  D++  NAGI   S G++ +    DL     +++ N  G       
Sbjct: 65  LAAAAADFIAAHGLPDVVIANAGI---SVGTLTEER-EDLAVFREVMDTNYFGMVATFQP 120

Query: 127 FLGAKHAARVMVPQQKGCILFTASACTEIAGL----GSPAYTISKYGILGLVKCLAAELG 182
           F+        M   ++G ++  AS    +AG+    G+ AY+ SK   +  ++ L  EL 
Sbjct: 121 FIAP------MRAARRGTLVGIAS----VAGVRGLPGAGAYSASKAAAIKYLESLRVELR 170

Query: 183 QYGIRVNCVSPYGLATGM 200
             G+RV  ++P  + T M
Sbjct: 171 PAGVRVVTIAPGYIRTPM 188

Length = 257

>gnl|CDD|212496 cd11730, Tthb094_like_SDR_c, Tthb094 and related proteins, classical (c) SDRs

 Score = 44.0 bits (104), Expect = 2e-05
 Identities = 42/183 (22%), Positives = 71/183 (38%), Gaps = 12/183 (6%)

Query: 18  AIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVI 77
           A+I G   GIG          G +++++         LA ++G        D++ E EV 
Sbjct: 1   ALILGATGGIGRALARALAGRGWRLLLSGRDAGALAGLAAEVGALA--RPADVAAELEVW 58

Query: 78  NLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVM 137
            L        G LD++   AG +      +  T  +   R+++ N  G  L  KHA  ++
Sbjct: 59  ALAQEL----GPLDLLVYAAGAILGK--PLARTKPAAWRRILDANLTGAALVLKHALALL 112

Query: 138 VPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLA 197
               +   L        + GL   AY  +K  +   V+    E    G+R+  V P  + 
Sbjct: 113 AAGARLVFLGAYPELVMLPGLS--AYAAAKAALEAYVEVARKE--VRGLRLTLVRPPAVD 168

Query: 198 TGM 200
           TG+
Sbjct: 169 TGL 171

Tthb094 from Thermus Thermophilus is a classical SDR which binds NADP. Members of this subgroup contain the YXXXK active site characteristic of SDRs. Also, an upstream Asn residue of the canonical catalytic tetrad is partially conserved in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 206

>gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases

 Score = 43.6 bits (104), Expect = 2e-05
 Identities = 24/110 (21%), Positives = 42/110 (38%), Gaps = 11/110 (10%)

Query: 16  KVAIITGGASGIGAMAVELFHENGAKVVI--------ADVQDKLGEDLADKLGQDVCYIH 67
              +ITGG  G+G        E GA+ ++        A     L  +L    G  V  + 
Sbjct: 1   GTYLITGGLGGLGRALARWLAERGARRLVLLSRSGPDAPGAAALLAELEA-AGARVTVVA 59

Query: 68  CDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLER 117
           CD+++ D +  ++    +  G L  + + AG+LD   G +          
Sbjct: 60  CDVADRDALAAVLAAIPAVEGPLTGVIHAAGVLD--DGVLASLTPERFAA 107

It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180

>gnl|CDD|219957 pfam08659, KR, KR domain

 Score = 43.3 bits (103), Expect = 3e-05
 Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 15/109 (13%)

Query: 19  IITGGASGIG-AMAVELFHENGAKVVI---------ADVQDKLGEDLADKLGQDVCYIHC 68
           ++TGG  G+G  +A  L  E GA+ ++          + +  L  +L    G +V  + C
Sbjct: 4   LVTGGLGGLGLELARWLA-ERGARHLVLLSRSGAPDPEAEALL-AELEA-RGAEVTVVAC 60

Query: 69  DISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLER 117
           D+S+ D V  L+    +    L  + + AG+L      + +    D  R
Sbjct: 61  DVSDRDAVRALLAEIRADGPPLRGVIHAAGVLR--DALLANMTAEDFAR 107

This enzymatic domain is part of bacterial polyketide synthases and catalyzes the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 181

>gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs

 Score = 44.0 bits (104), Expect = 3e-05
 Identities = 37/124 (29%), Positives = 58/124 (46%), Gaps = 19/124 (15%)

Query: 15  GKVAIITGGASGIG-AMAVELFHENGAKVVIA--DV---QDKLGEDLADKLGQDVCYIHC 68
           GK  IITG  +GIG   A EL    GA+V++A  D+   ++   E   D L  +V   H 
Sbjct: 1   GKTVIITGANTGIGKETARELA-RRGARVIMACRDMAKCEEAAAEIRRDTLNHEVIVRHL 59

Query: 69  DISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKS----DLERLINVNTI 124
           D+++   +       +++  +LD++ NNAG        ++  P S      E    VN +
Sbjct: 60  DLASLKSIRAFAAEFLAEEDRLDVLINNAG--------VMRCPYSKTEDGFEMQFGVNHL 111

Query: 125 GGFL 128
           G FL
Sbjct: 112 GHFL 115

Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274

>gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional

 Score = 43.6 bits (103), Expect = 4e-05
 Identities = 41/186 (22%), Positives = 81/186 (43%), Gaps = 8/186 (4%)

Query: 17  VAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEV 76
           + ++TG  +G G      F + G KV+    + +  ++L D+LG ++     D+ N   +
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAI 61

Query: 77  INLVDTAVSKFGKLDIMYNNAGI---LDRSFGSILDTPKSDLERLINVNTIGGFLGAKHA 133
             ++ +  +++  +D++ NNAG+   L+ +  + ++    D E +I+ N  G     +  
Sbjct: 62  EEMLASLPAEWRNIDVLVNNAGLALGLEPAHKASVE----DWETMIDTNNKGLVYMTRAV 117

Query: 134 ARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSP 193
              MV +  G I+   S        G   Y  +K  +      L  +L    +RV  + P
Sbjct: 118 LPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEP 177

Query: 194 YGLATG 199
            GL  G
Sbjct: 178 -GLVGG 182

Length = 248

>gnl|CDD|187645 cd08941, 3KS_SDR_c, 3-keto steroid reductase, classical (c) SDRs

 Score = 41.2 bits (97), Expect = 2e-04
 Identities = 29/117 (24%), Positives = 44/117 (37%), Gaps = 15/117 (12%)

Query: 16  KVAIITGGASGIG-AMAVELFHENGAKVVI---------ADVQDKLGEDLA--DKLGQDV 63
           KV ++TG  SG+G A+   L  E+     +            +      LA         
Sbjct: 2   KVVLVTGANSGLGLAICERLLAEDDENPELTLILACRNLQRAEAACRALLASHPDARVVF 61

Query: 64  CYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLIN 120
            Y+  D+SN   V         ++ +LD +Y NAGI+      I D   +  E L N
Sbjct: 62  DYVLVDLSNMVSVFAAAKELKKRYPRLDYLYLNAGIMP--NPGI-DWIGAIKEVLTN 115

3-keto steroid reductase (in concert with other enzymes) catalyzes NADP-dependent sterol C-4 demethylation, as part of steroid biosynthesis. 3-keto reductase is a classical SDR, with a well conserved canonical active site tetrad and fairly well conserved characteristic NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 290

>gnl|CDD|180789 PRK06997, PRK06997, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 40.6 bits (95), Expect = 4e-04
 Identities = 67/271 (24%), Positives = 113/271 (41%), Gaps = 35/271 (12%)

Query: 13  LEGKVAIITGGAS------GIGAMAVELFHENGAKVVIADVQDKLGE---DLADKLGQDV 63
           L GK  +ITG  S      GI           GA++    V D+  +   + A + G D+
Sbjct: 4   LAGKRILITGLLSNRSIAYGIAKAC----KREGAELAFTYVGDRFKDRITEFAAEFGSDL 59

Query: 64  CYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSF--GSILDTPKSDLERLINV 121
            +  CD+++++++  L  +    +  LD + ++ G   R    G  LD    +  R+ + 
Sbjct: 60  VF-PCDVASDEQIDALFASLGQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHD 118

Query: 122 NTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKC----- 176
            +   F     AA  M+          AS  T ++ LG+    +  Y  +GL K      
Sbjct: 119 ISAYSFPALAKAALPMLSDD-------ASLLT-LSYLGA-ERVVPNYNTMGLAKASLEAS 169

Query: 177 ---LAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIAN 233
              LA  LG  GIR N +S   + T ++  G  D   I   +     L+   +  + + N
Sbjct: 170 VRYLAVSLGPKGIRANGISAGPIKT-LAASGIKDFGKILDFVESNAPLRRN-VTIEEVGN 227

Query: 234 AALYLASDESSYVSGQNLVVDGGFSVVNPTV 264
            A +L SD +S V+G+   VD GF+ V   +
Sbjct: 228 VAAFLLSDLASGVTGEITHVDSGFNAVVGGM 258

Length = 260

>gnl|CDD|169390 PRK08340, PRK08340, glucose-1-dehydrogenase; Provisional

 Score = 40.6 bits (95), Expect = 4e-04
 Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 2/82 (2%)

Query: 19 IITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQ--DVCYIHCDISNEDEV 76
          ++T  + GIG        + GA+VVI+   ++  E    +L +  +V  +  D+S++D++
Sbjct: 4  LVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDL 63

Query: 77 INLVDTAVSKFGKLDIMYNNAG 98
           NLV  A    G +D +  NAG
Sbjct: 64 KNLVKEAWELLGGIDALVWNAG 85

Length = 259

>gnl|CDD|187669 cd09809, human_WWOX_like_SDR_c-like, human WWOX (WW domain-containing oxidoreductase)-like, classical (c)-like SDRs

 Score = 40.7 bits (95), Expect = 5e-04
 Identities = 29/119 (24%), Positives = 46/119 (38%), Gaps = 9/119 (7%)

Query: 15  GKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHC-----D 69
           GKV IITG  SGIG      F  +GA V++A            ++ ++           D
Sbjct: 1   GKVIIITGANSGIGFETARSFALHGAHVILACRNMSRASAAVSRILEEWHKARVEAMTLD 60

Query: 70  ISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFL 128
           +++   V    +   +K   L ++  NA +    F       +  LE    VN +G F 
Sbjct: 61  LASLRSVQRFAEAFKAKNSPLHVLVCNAAV----FALPWTLTEDGLETTFQVNHLGHFY 115

Classical-like SDR domain of human WWOX and related proteins. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 284

>gnl|CDD|187568 cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, extended (e) SDRs

 Score = 38.8 bits (91), Expect = 0.002
 Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 6/71 (8%)

Query: 16 KVAIITGGASGIGAMAVELFHENGAKVVIAD------VQDKLGEDLADKLGQDVCYIHCD 69
             +ITGGA  IG+     F + G +V+  D          L    A++    V ++H D
Sbjct: 1  MRVLITGGAGFIGSNLARFFLKQGWEVIGFDNLMRRGSFGNLAWLKANREDGGVRFVHGD 60

Query: 70 ISNEDEVINLV 80
          I N +++ +L 
Sbjct: 61 IRNRNDLEDLF 71

CDP-tyvelose 2-epimerase is a tetrameric SDR that catalyzes the conversion of CDP-D-paratose to CDP-D-tyvelose, the last step in tyvelose biosynthesis. This subgroup is a member of the extended SDR subfamily, with a characteristic active site tetrad and NAD-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 337

>gnl|CDD|180983 PRK07453, PRK07453, protochlorophyllide oxidoreductase; Validated

 Score = 38.8 bits (91), Expect = 0.002
 Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 5/86 (5%)

Query: 18 AIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLG---QDVCYIHCDISNED 74
           IITG +SG+G  A +   + G  V++A    K  E  A +LG        IH D+ + D
Sbjct: 9  VIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLD 68

Query: 75 EVINLVDTAVSKFGK-LDIMYNNAGI 99
           V   VD      GK LD +  NA +
Sbjct: 69 SVRRFVDD-FRALGKPLDALVCNAAV 93

Length = 322

>gnl|CDD|236016 PRK07424, PRK07424, bifunctional sterol desaturase/short chain dehydrogenase; Validated

 Score = 38.9 bits (91), Expect = 0.002
 Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 9/88 (10%)

Query: 13  LEGKVAIITGGASGIGAMAVELFHENGAKVV-IADVQDKLGEDLADKLGQDVCYIHCDIS 71
           L+GK   +TG +  +G   ++  H+ GAKVV +    DK+  ++  +    V  +H  + 
Sbjct: 176 LKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGE-DLPVKTLHWQVG 234

Query: 72  NEDEVINLVDTAVSKFGKLDIMYNNAGI 99
            E  +  L         K+DI+  N GI
Sbjct: 235 QEAALAEL-------LEKVDILIINHGI 255

Length = 406

>gnl|CDD|180753 PRK06924, PRK06924, short chain dehydrogenase; Provisional

 Score = 38.5 bits (90), Expect = 0.002
 Identities = 43/199 (21%), Positives = 84/199 (42%), Gaps = 21/199 (10%)

Query: 16  KVAIITGGASGIGAMAVELFHENGAKVV-IADVQDKLGEDLADKLGQDVCYIHCDISNED 74
           +  IITG + G+G        E G  V+ I+  ++K    LA++   ++ +   D+ +  
Sbjct: 2   RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQYNSNLTFHSLDLQDVH 61

Query: 75  EVINLVDTAVSKFGKLDI----MYNNAGILDRSFGSILDTPKSDLERLI---NVNTIGGF 127
           E+    +  +S   + ++    + NNAG++      I    K++ E LI   ++N +   
Sbjct: 62  ELETNFNEILSSIQEDNVSSIHLINNAGMVA----PIKPIEKAESEELITNVHLNLLAPM 117

Query: 128 LGA----KHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAE--L 181
           +      KH     V      ++  +S   +    G  AY  SK G+    + +A E   
Sbjct: 118 ILTSTFMKHTKDWKV---DKRVINISSGAAKNPYFGWSAYCSSKAGLDMFTQTVATEQEE 174

Query: 182 GQYGIRVNCVSPYGLATGM 200
            +Y +++   SP  + T M
Sbjct: 175 EEYPVKIVAFSPGVMDTNM 193

Length = 251

>gnl|CDD|166421 PLN02780, PLN02780, ketoreductase/ oxidoreductase

 Score = 38.7 bits (90), Expect = 0.002
 Identities = 56/208 (26%), Positives = 91/208 (43%), Gaps = 21/208 (10%)

Query: 9   PFKRLE--GKVAIITGGASGIG-AMAVELFHENGAKVVIADVQDKLGEDLAD----KLGQ 61
           P K L+  G  A++TG   GIG   A +L  +    V++A   DKL +D++D    K  +
Sbjct: 45  PAKNLKKYGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKL-KDVSDSIQSKYSK 103

Query: 62  -DVCYIHCDISNE-DEVINLVDTAVSKFGKLDIMYNNAGI---LDRSFGSILDTPKSDLE 116
             +  +  D S + DE +  +   +     + ++ NN G+     R F  + +     L+
Sbjct: 104 TQIKTVVVDFSGDIDEGVKRIKETIEGL-DVGVLINNVGVSYPYARFFHEVDE---ELLK 159

Query: 117 RLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTI---SKYGILGL 173
            LI VN  G     +     M+ ++KG I+   S    I     P Y +   +K  I   
Sbjct: 160 NLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAA-IVIPSDPLYAVYAATKAYIDQF 218

Query: 174 VKCLAAELGQYGIRVNCVSPYGLATGMS 201
            +CL  E  + GI V C  P  +AT M+
Sbjct: 219 SRCLYVEYKKSGIDVQCQVPLYVATKMA 246

Length = 320

>gnl|CDD|236229 PRK08303, PRK08303, short chain dehydrogenase; Provisional

 Score = 38.4 bits (90), Expect = 0.002
 Identities = 48/207 (23%), Positives = 79/207 (38%), Gaps = 29/207 (14%)

Query: 11  KRLEGKVAIITGGASGIG-AMAVELFHENGAKVVIA--DVQDKLGE-----------DLA 56
           K L GKVA++ G   G G  +AVEL    GA V +     + +  E           +L 
Sbjct: 4   KPLRGKVALVAGATRGAGRGIAVEL-GAAGATVYVTGRSTRARRSEYDRPETIEETAELV 62

Query: 57  DKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNN--AGILDRSFGSI-----LD 109
              G     +  D    ++V  LV+    + G+LDI+ N+   G     +G       LD
Sbjct: 63  TAAGGRGIAVQVDHLVPEQVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLD 122

Query: 110 TPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLG---SPAYTIS 166
                L   I+ + I     +  A  +++ +  G ++       E        S  Y ++
Sbjct: 123 KGLRMLRLAIDTHLI----TSHFALPLLIRRPGGLVVEITDGTAEYNATHYRLSVFYDLA 178

Query: 167 KYGILGLVKCLAAELGQYGIRVNCVSP 193
           K  +  L   LA EL  +G     ++P
Sbjct: 179 KTSVNRLAFSLAHELAPHGATAVALTP 205

Length = 305

>gnl|CDD|234027 TIGR02824, quinone_pig3, putative NAD(P)H quinone oxidoreductase, PIG3 family

 Score = 38.4 bits (90), Expect = 0.003
 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 7/50 (14%)

Query: 14  EGKVAIITGGASGIGAMAVELFHENGAKVVI-------ADVQDKLGEDLA 56
            G+  +I GGASGIG  A++L    GA+V             + LG D+A
Sbjct: 139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAACEALGADIA 188

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized [Unknown function, Enzymes of unknown specificity]. Length = 325

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 38.4 bits (89), Expect = 0.003
 Identities = 55/252 (21%), Positives = 86/252 (34%), Gaps = 46/252 (18%)

Query: 19  IITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVIN 78
           ++TGGA  IG+  VE     G  V   D       D  D L   V ++  D+++ D V  
Sbjct: 4   LVTGGAGFIGSHLVERLLAAGHDVRGLD----RLRDGLDPLLSGVEFVVLDLTDRDLVDE 59

Query: 79  LVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMV 138
           L           D + + A     S     +         +NV+     L A  AA V  
Sbjct: 60  LAKGVP------DAVIHLAAQ---SSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGV-- 108

Query: 139 PQQKGCILFTASACT--------EIAGLGSPAYTISKYGILGLVKCLAAEL-----GQYG 185
             ++   +F +S            I     P   ++ YG+    K  A +L       YG
Sbjct: 109 --KR--FVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVS---KLAAEQLLRAYARLYG 161

Query: 186 IRVNCVSP---YGLATGMSMKGGVDPALIES--------SMSQMGNLKGEFLKTDGIANA 234
           + V  + P   YG      +  GV  A I           +   G+   +F+  D +A+A
Sbjct: 162 LPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADA 221

Query: 235 ALYLASDESSYV 246
            L    +    V
Sbjct: 222 LLLALENPDGGV 233

Length = 314

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	272
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	100.0
PRK08339	263	short chain dehydrogenase; Provisional	100.0
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07063	260	short chain dehydrogenase; Provisional	100.0
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	100.0
PRK08265	261	short chain dehydrogenase; Provisional	100.0
PRK07478	254	short chain dehydrogenase; Provisional	100.0
PRK05867	253	short chain dehydrogenase; Provisional	100.0
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	100.0
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
KOG0725	270	consensus Reductases with broad range of substrate	100.0
PRK06114	254	short chain dehydrogenase; Provisional	100.0
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	100.0
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08589	272	short chain dehydrogenase; Validated	100.0
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08085	254	gluconate 5-dehydrogenase; Provisional	100.0
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	100.0
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07062	265	short chain dehydrogenase; Provisional	100.0
PRK06398	258	aldose dehydrogenase; Validated	100.0
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	100.0
PRK07791	286	short chain dehydrogenase; Provisional	100.0
PRK08340	259	glucose-1-dehydrogenase; Provisional	100.0
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	100.0
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PLN02253	280	xanthoxin dehydrogenase	100.0
PRK06172	253	short chain dehydrogenase; Provisional	100.0
PRK08277	278	D-mannonate oxidoreductase; Provisional	100.0
PRK07523	255	gluconate 5-dehydrogenase; Provisional	100.0
PRK06841	255	short chain dehydrogenase; Provisional	100.0
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	100.0
PRK07985	294	oxidoreductase; Provisional	100.0
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	100.0
PRK07035	252	short chain dehydrogenase; Provisional	100.0
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	100.0
PRK12747	252	short chain dehydrogenase; Provisional	100.0
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK07067	257	sorbitol dehydrogenase; Provisional	100.0
PRK06128	300	oxidoreductase; Provisional	100.0
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK08643	256	acetoin reductase; Validated	100.0
PRK07831	262	short chain dehydrogenase; Provisional	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK07097	265	gluconate 5-dehydrogenase; Provisional	100.0
COG0300	265	DltE Short-chain dehydrogenases of various substra	100.0
PRK08303	305	short chain dehydrogenase; Provisional	100.0
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07677	252	short chain dehydrogenase; Provisional	100.0
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	100.0
PRK07856	252	short chain dehydrogenase; Provisional	100.0
PRK12743	256	oxidoreductase; Provisional	100.0
PRK05717	255	oxidoreductase; Validated	100.0
PRK09242	257	tropinone reductase; Provisional	100.0
PRK08226	263	short chain dehydrogenase; Provisional	100.0
PRK06125	259	short chain dehydrogenase; Provisional	100.0
PRK06124	256	gluconate 5-dehydrogenase; Provisional	100.0
PRK08936	261	glucose-1-dehydrogenase; Provisional	100.0
PRK06523	260	short chain dehydrogenase; Provisional	100.0
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	100.0
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	100.0
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	100.0
PRK06483	236	dihydromonapterin reductase; Provisional	100.0
PRK06500	249	short chain dehydrogenase; Provisional	100.0
PRK06940	275	short chain dehydrogenase; Provisional	100.0
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	100.0
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	100.0
PRK12938	246	acetyacetyl-CoA reductase; Provisional	100.0
PRK06949	258	short chain dehydrogenase; Provisional	100.0
PRK06057	255	short chain dehydrogenase; Provisional	100.0
PRK12939	250	short chain dehydrogenase; Provisional	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK05872	296	short chain dehydrogenase; Provisional	100.0
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	100.0
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	100.0
PRK06701	290	short chain dehydrogenase; Provisional	100.0
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07576	264	short chain dehydrogenase; Provisional	100.0
PRK07890	258	short chain dehydrogenase; Provisional	100.0
PRK12742	237	oxidoreductase; Provisional	100.0
PRK08213	259	gluconate 5-dehydrogenase; Provisional	100.0
PRK08628	258	short chain dehydrogenase; Provisional	100.0
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06138	252	short chain dehydrogenase; Provisional	100.0
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	100.0
PRK07814	263	short chain dehydrogenase; Provisional	100.0
PRK09186	256	flagellin modification protein A; Provisional	100.0
PRK12937	245	short chain dehydrogenase; Provisional	100.0
PRK08278	273	short chain dehydrogenase; Provisional	100.0
TIGR02415	254	23BDH acetoin reductases. One member of this famil	100.0
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	100.0
PRK07069	251	short chain dehydrogenase; Validated	100.0
PRK12935	247	acetoacetyl-CoA reductase; Provisional	100.0
PRK12744	257	short chain dehydrogenase; Provisional	100.0
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	100.0
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	100.0
PRK07774	250	short chain dehydrogenase; Provisional	100.0
PRK12824	245	acetoacetyl-CoA reductase; Provisional	100.0
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	100.0
PRK07074	257	short chain dehydrogenase; Provisional	100.0
PRK05875	276	short chain dehydrogenase; Provisional	100.0
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	100.0
PRK06139	330	short chain dehydrogenase; Provisional	100.0
PRK08862	227	short chain dehydrogenase; Provisional	100.0
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	100.0
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	100.0
PRK06947	248	glucose-1-dehydrogenase; Provisional	100.0
PRK05884	223	short chain dehydrogenase; Provisional	100.0
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK06123	248	short chain dehydrogenase; Provisional	100.0
PRK06198	260	short chain dehydrogenase; Provisional	100.0
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12746	254	short chain dehydrogenase; Provisional	100.0
PRK08703	239	short chain dehydrogenase; Provisional	100.0
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK05876	275	short chain dehydrogenase; Provisional	100.0
PRK09134	258	short chain dehydrogenase; Provisional	100.0
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK05599	246	hypothetical protein; Provisional	100.0
PRK07577	234	short chain dehydrogenase; Provisional	100.0
PRK07060	245	short chain dehydrogenase; Provisional	100.0
PRK07109	334	short chain dehydrogenase; Provisional	100.0
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	100.0
PRK12827	249	short chain dehydrogenase; Provisional	100.0
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	100.0
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK08263	275	short chain dehydrogenase; Provisional	100.0
PRK07825	273	short chain dehydrogenase; Provisional	100.0
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06182	273	short chain dehydrogenase; Validated	100.0
PLN00015	308	protochlorophyllide reductase	100.0
PRK06196	315	oxidoreductase; Provisional	100.0
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	100.0
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	100.0
PRK07832	272	short chain dehydrogenase; Provisional	100.0
PRK12828	239	short chain dehydrogenase; Provisional	100.0
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06180	277	short chain dehydrogenase; Provisional	100.0
PRK06924	251	short chain dehydrogenase; Provisional	100.0
PRK05854	313	short chain dehydrogenase; Provisional	100.0
PRK12829	264	short chain dehydrogenase; Provisional	100.0
PRK06197	306	short chain dehydrogenase; Provisional	100.0
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	100.0
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	100.0
PRK05866	293	short chain dehydrogenase; Provisional	100.0
PRK08324	681	short chain dehydrogenase; Validated	100.0
PRK07454	241	short chain dehydrogenase; Provisional	100.0
PRK10538	248	malonic semialdehyde reductase; Provisional	100.0
PRK05993	277	short chain dehydrogenase; Provisional	100.0
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	100.0
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	100.0
PRK07041	230	short chain dehydrogenase; Provisional	100.0
PRK07024	257	short chain dehydrogenase; Provisional	100.0
PRK06914	280	short chain dehydrogenase; Provisional	100.0
PLN02780	320	ketoreductase/ oxidoreductase	100.0
PRK05650	270	short chain dehydrogenase; Provisional	100.0
PRK05855	582	short chain dehydrogenase; Validated	100.0
PRK09009	235	C factor cell-cell signaling protein; Provisional	100.0
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	100.0
PRK09135	249	pteridine reductase; Provisional	100.0
COG1028	251	FabG Dehydrogenases with different specificities (	100.0
PRK07775	274	short chain dehydrogenase; Provisional	100.0
PRK06194	287	hypothetical protein; Provisional	100.0
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK09072	263	short chain dehydrogenase; Provisional	100.0
PRK06179	270	short chain dehydrogenase; Provisional	100.0
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	100.0
PRK07806	248	short chain dehydrogenase; Provisional	100.0
PRK08267	260	short chain dehydrogenase; Provisional	100.0
PRK06482	276	short chain dehydrogenase; Provisional	100.0
PRK07904	253	short chain dehydrogenase; Provisional	100.0
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	100.0
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07453	322	protochlorophyllide oxidoreductase; Validated	100.0
PRK08251	248	short chain dehydrogenase; Provisional	100.0
KOG1611	249	consensus Predicted short chain-type dehydrogenase	100.0
PRK05693	274	short chain dehydrogenase; Provisional	100.0
PRK06181	263	short chain dehydrogenase; Provisional	100.0
PRK07578	199	short chain dehydrogenase; Provisional	100.0
KOG1208	314	consensus Dehydrogenases with different specificit	100.0
PRK07102	243	short chain dehydrogenase; Provisional	100.0
PRK07023	243	short chain dehydrogenase; Provisional	100.0
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	100.0
PRK07326	237	short chain dehydrogenase; Provisional	100.0
PRK07201	657	short chain dehydrogenase; Provisional	100.0
PRK06101	240	short chain dehydrogenase; Provisional	100.0
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	100.0
PRK08177	225	short chain dehydrogenase; Provisional	100.0
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	100.0
PRK08264	238	short chain dehydrogenase; Validated	99.98
PRK08017	256	oxidoreductase; Provisional	99.97
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.97
PRK12367	245	short chain dehydrogenase; Provisional	99.97
PRK09291	257	short chain dehydrogenase; Provisional	99.97
PRK06953	222	short chain dehydrogenase; Provisional	99.97
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.97
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.97
PRK08219	227	short chain dehydrogenase; Provisional	99.97
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.96
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.96
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.94
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.93
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.93
PLN03209	576	translocon at the inner envelope of chloroplast su	99.92
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.92
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.92
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.9
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.9
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.9
PLN02583	297	cinnamoyl-CoA reductase	99.89
PLN02653	340	GDP-mannose 4,6-dehydratase	99.89
PLN02572	442	UDP-sulfoquinovose synthase	99.89
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.89
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.88
PLN02214	342	cinnamoyl-CoA reductase	99.88
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.88
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.88
PLN02650	351	dihydroflavonol-4-reductase	99.88
PLN00198	338	anthocyanidin reductase; Provisional	99.88
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.87
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.87
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.86
PLN02686	367	cinnamoyl-CoA reductase	99.85
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.85
PLN02240	352	UDP-glucose 4-epimerase	99.85
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.84
PRK06720	169	hypothetical protein; Provisional	99.84
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.83
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.83
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.83
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.82
PLN02427	386	UDP-apiose/xylose synthase	99.82
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.81
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.81
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.81
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.79
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.79
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.78
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.78
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.77
PLN02260	668	probable rhamnose biosynthetic enzyme	99.77
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.77
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.76
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.75
PLN02206	442	UDP-glucuronate decarboxylase	99.74
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.73
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.73
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.72
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.72
CHL00194	317	ycf39 Ycf39; Provisional	99.72
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.7
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.7
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.67
PRK07201	657	short chain dehydrogenase; Provisional	99.64
PLN02996	491	fatty acyl-CoA reductase	99.64
PRK05865	854	hypothetical protein; Provisional	99.63
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.6
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.6
PLN02778	298	3,5-epimerase/4-reductase	99.59
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.56
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.56
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	99.53
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.52
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	99.52
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.5
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.5
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.5
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.46
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.44
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	99.41
PLN00016	378	RNA-binding protein; Provisional	99.4
PRK12320	699	hypothetical protein; Provisional	99.37
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	99.35
PLN02260	668	probable rhamnose biosynthetic enzyme	99.35
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.33
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.33
PRK08309	177	short chain dehydrogenase; Provisional	99.31
PLN02503	605	fatty acyl-CoA reductase 2	99.3
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	99.26
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.18
COG4982	866	3-oxoacyl-[acyl-carrier protein]	99.04
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	99.04
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	98.9
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.87
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	98.86
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	98.85
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	98.84
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	98.73
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.72
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.69
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.63
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.63
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	98.61
COG2910	211	Putative NADH-flavin reductase [General function p	98.61
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.5
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	98.48
PLN00106	323	malate dehydrogenase	98.35
PRK09620	229	hypothetical protein; Provisional	98.35
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.32
KOG2774	366	consensus NAD dependent epimerase [General functio	98.28
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.22
PRK14982	340	acyl-ACP reductase; Provisional	98.16
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	98.09
PTZ00325	321	malate dehydrogenase; Provisional	98.09
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	98.04
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	98.01
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	97.98
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.87
KOG2733	423	consensus Uncharacterized membrane protein [Functi	97.86
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	97.79
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.77
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.73
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	97.72
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.63
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	97.55
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.54
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	97.53
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.51
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	97.49
PRK13940	414	glutamyl-tRNA reductase; Provisional	97.48
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	97.47
PRK05086	312	malate dehydrogenase; Provisional	97.41
COG3268	382	Uncharacterized conserved protein [Function unknow	97.39
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	97.38
COG3007	398	Uncharacterized paraquat-inducible protein B [Func	97.38
KOG4288	283	consensus Predicted oxidoreductase [General functi	97.36
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	97.35
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.34
PRK06849	389	hypothetical protein; Provisional	97.33
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	97.32
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	97.29
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	97.26
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	97.26
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.25
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	97.24
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	97.21
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	97.18
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	97.18
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	97.16
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	97.16
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	97.15
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	97.14
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	97.14
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	97.12
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	97.07
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.05
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.05
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	97.04
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	97.01
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	96.99
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.98
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.97
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	96.95
COG2130	340	Putative NADP-dependent oxidoreductases [General f	96.92
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	96.9
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	96.9
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	96.88
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	96.87
PLN00203	519	glutamyl-tRNA reductase	96.86
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	96.86
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.86
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.76
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	96.74
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	96.73
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	96.72
PRK04148	134	hypothetical protein; Provisional	96.71
COG0569	225	TrkA K+ transport systems, NAD-binding component [	96.7
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	96.69
PRK08306	296	dipicolinate synthase subunit A; Reviewed	96.69
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	96.67
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	96.65
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	96.61
PRK05442	326	malate dehydrogenase; Provisional	96.59
PRK09496	453	trkA potassium transporter peripheral membrane com	96.56
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	96.54
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	96.5
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	96.48
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	96.47
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	96.47
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	96.43
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.43
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	96.41
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	96.34
PRK15116	268	sulfur acceptor protein CsdL; Provisional	96.33
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	96.28
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	96.28
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	96.26
PRK14968	188	putative methyltransferase; Provisional	96.23
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	96.23
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	96.23
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	96.21
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	96.21
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	96.21
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	96.2
PLN02586	360	probable cinnamyl alcohol dehydrogenase	96.19
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	96.19
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	96.18
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	96.14
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	96.13
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	96.12
PLN02740	381	Alcohol dehydrogenase-like	96.1
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	96.09
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	96.06
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	96.05
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	96.05
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	96.05
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	95.99
PRK00141	473	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.98
PTZ00354	334	alcohol dehydrogenase; Provisional	95.96
PLN00112	444	malate dehydrogenase (NADP); Provisional	95.95
PTZ00082	321	L-lactate dehydrogenase; Provisional	95.95
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	95.95
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	95.93
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	95.89
PLN02178	375	cinnamyl-alcohol dehydrogenase	95.88
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	95.88
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	95.85
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	95.82
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	95.8
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	95.79
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	95.79
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.79
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	95.79
PRK09496	453	trkA potassium transporter peripheral membrane com	95.78
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	95.77
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	95.77
PTZ00117	319	malate dehydrogenase; Provisional	95.77
cd05191	86	NAD_bind_amino_acid_DH NAD(P) binding domain of am	95.76
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	95.75
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	95.74
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	95.73
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	95.68
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	95.66
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	95.65
PTZ00075	476	Adenosylhomocysteinase; Provisional	95.63
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	95.59
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	95.55
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	95.53
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	95.53
PRK06932	314	glycerate dehydrogenase; Provisional	95.53
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	95.52
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	95.52
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	95.52
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	95.52
PRK07574	385	formate dehydrogenase; Provisional	95.51
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	95.49
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	95.45
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	95.44
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	95.42
PRK08655	437	prephenate dehydrogenase; Provisional	95.41
PRK08410	311	2-hydroxyacid dehydrogenase; Provisional	95.4
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.39
PRK06223	307	malate dehydrogenase; Reviewed	95.38
PRK02006	498	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.37
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	95.36
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	95.36
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.36
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	95.33
COG1052	324	LdhA Lactate dehydrogenase and related dehydrogena	95.32
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	95.3
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	95.29
PRK08328	231	hypothetical protein; Provisional	95.28
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	95.27
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	95.27
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	95.26
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	95.26
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	95.26
PRK13243	333	glyoxylate reductase; Reviewed	95.25
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	95.23
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	95.21
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	95.2
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	95.2
PRK12480	330	D-lactate dehydrogenase; Provisional	95.17
TIGR02817	336	adh_fam_1 zinc-binding alcohol dehydrogenase famil	95.14
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	95.14
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	95.12
PLN02602	350	lactate dehydrogenase	95.11
PLN02827	378	Alcohol dehydrogenase-like	95.09
PRK06487	317	glycerate dehydrogenase; Provisional	95.08
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	95.07
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	95.06
PRK05479	330	ketol-acid reductoisomerase; Provisional	95.02
TIGR03840	213	TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d	95.02
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.93
PLN02514	357	cinnamyl-alcohol dehydrogenase	94.88
PRK06436	303	glycerate dehydrogenase; Provisional	94.86
cd08260	345	Zn_ADH6 Alcohol dehydrogenases of the MDR family.	94.84
cd05195	293	enoyl_red enoyl reductase of polyketide synthase.	94.82

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=100.00  E-value=4.6e-50  Score=310.81  Aligned_cols=242  Identities=36%  Similarity=0.539  Sum_probs=224.0

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCC--ceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQ--DVCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      .++..|.++||||++|||+++++.|+++|++|+..+++....++....+++  ....+.||+++.++++..+++..+.+|
T Consensus        10 ~r~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g   89 (256)
T KOG1200|consen   10 QRLMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLG   89 (256)
T ss_pred             HHHhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcC
Confidence            456789999999999999999999999999999999998888888888865  788999999999999999999999999


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhc--CCCCceEEEEecccccccCCCCchhhhh
Q 024145           89 KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMV--PQQKGCILFTASACTEIAGLGSPAYTIS  166 (272)
Q Consensus        89 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~~g~iv~iss~~~~~~~~~~~~Y~~s  166 (272)
                      .+++||||||+..+  ..+..++.++|++++.+|+.+.|+++|++.+.|.  ++..++||++||+.+..+..++..|++|
T Consensus        90 ~psvlVncAGItrD--~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~GQtnYAAs  167 (256)
T KOG1200|consen   90 TPSVLVNCAGITRD--GLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFGQTNYAAS  167 (256)
T ss_pred             CCcEEEEcCccccc--cceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccccchhhhhh
Confidence            99999999999877  7788999999999999999999999999999853  3345599999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCc
Q 024145          167 KYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYV  246 (272)
Q Consensus       167 K~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  246 (272)
                      |+++.+|++++|+|++++||+||.++||++.|||..   ..++.+.+..-...|+ +|+..+||+|+.++||+|+.++|+
T Consensus       168 K~GvIgftktaArEla~knIrvN~VlPGFI~tpMT~---~mp~~v~~ki~~~iPm-gr~G~~EevA~~V~fLAS~~ssYi  243 (256)
T KOG1200|consen  168 KGGVIGFTKTAARELARKNIRVNVVLPGFIATPMTE---AMPPKVLDKILGMIPM-GRLGEAEEVANLVLFLASDASSYI  243 (256)
T ss_pred             cCceeeeeHHHHHHHhhcCceEeEeccccccChhhh---hcCHHHHHHHHccCCc-cccCCHHHHHHHHHHHhccccccc
Confidence            999999999999999999999999999999999998   5566666666677777 999999999999999999999999


Q ss_pred             cccEEEecCcee
Q 024145          247 SGQNLVVDGGFS  258 (272)
Q Consensus       247 ~G~~i~~dgG~~  258 (272)
                      +|+.+.++||+.
T Consensus       244 TG~t~evtGGl~  255 (256)
T KOG1200|consen  244 TGTTLEVTGGLA  255 (256)
T ss_pred             cceeEEEecccc
Confidence            999999999975

>PRK08339 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-47  Score=324.93  Aligned_cols=245  Identities=23%  Similarity=0.322  Sum_probs=214.0

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh----CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL----GQDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      +++||++|||||++|||++++++|+++|++|++++|+.+..++..+++    +.++.++.+|++|+++++++++++. ++
T Consensus         5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~-~~   83 (263)
T PRK08339          5 DLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELK-NI   83 (263)
T ss_pred             CCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHH-hh
Confidence            478999999999999999999999999999999999988777666554    4578899999999999999999986 58


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhH
Q 024145           88 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISK  167 (272)
Q Consensus        88 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK  167 (272)
                      |++|++|||+|....  .++.+.+.++|++.+++|+.+++.++++++|+|.+++.|+||++||..+..+.+....|+++|
T Consensus        84 g~iD~lv~nag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~~~~~~y~asK  161 (263)
T PRK08339         84 GEPDIFFFSTGGPKP--GYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIPNIALSNVVR  161 (263)
T ss_pred             CCCcEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCCCcchhhHHHH
Confidence            999999999997654  678889999999999999999999999999999887889999999999988889999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCC--------CChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHh
Q 024145          168 YGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGG--------VDPALIESSMSQMGNLKGEFLKTDGIANAALYLA  239 (272)
Q Consensus       168 ~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  239 (272)
                      +|+++|+++++.|++++||+||+|+||+++|++.....        ...++..+.+....++ +++.+|+|++++++||+
T Consensus       162 aal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~p~dva~~v~fL~  240 (263)
T PRK08339        162 ISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIPL-GRLGEPEEIGYLVAFLA  240 (263)
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhccCCc-ccCcCHHHHHHHHHHHh
Confidence            99999999999999999999999999999999854210        0111222222333444 89999999999999999


Q ss_pred             cCCCCCccccEEEecCceeec
Q 024145          240 SDESSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       240 s~~~~~~~G~~i~~dgG~~~~  260 (272)
                      ++++.+++|+++.+|||...+
T Consensus       241 s~~~~~itG~~~~vdgG~~~~  261 (263)
T PRK08339        241 SDLGSYINGAMIPVDGGRLNS  261 (263)
T ss_pred             cchhcCccCceEEECCCcccc
Confidence            999999999999999998765

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1e-46  Score=319.15  Aligned_cols=243  Identities=22%  Similarity=0.254  Sum_probs=208.5

Q ss_pred             CCCCcEEEEeCCC--ChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh-CCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145           12 RLEGKVAIITGGA--SGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL-GQDVCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus        12 ~l~~k~vlItGas--~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      .++||++|||||+  +|||++++++|+++|++|++++|+. ..++..+++ +.++.++++|++|+++++++++++.+++|
T Consensus         4 ~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   82 (252)
T PRK06079          4 ILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVG   82 (252)
T ss_pred             ccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhC
Confidence            3689999999999  8999999999999999999999974 333333433 34688999999999999999999999999


Q ss_pred             CccEEEeCCCCCCCC--CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhh
Q 024145           89 KLDIMYNNAGILDRS--FGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTIS  166 (272)
Q Consensus        89 ~id~lv~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~s  166 (272)
                      ++|+||||||...+.  .+++.+.+.++|++.+++|+.+++.+++.++|+|.+  .|+||++||..+..+.+.+..|++|
T Consensus        83 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~--~g~Iv~iss~~~~~~~~~~~~Y~as  160 (252)
T PRK06079         83 KIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNP--GASIVTLTYFGSERAIPNYNVMGIA  160 (252)
T ss_pred             CCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhccc--CceEEEEeccCccccCCcchhhHHH
Confidence            999999999986431  256788999999999999999999999999999964  5899999999998888899999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCc
Q 024145          167 KYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYV  246 (272)
Q Consensus       167 K~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  246 (272)
                      |+|+++|+++++.|++++||+||+|+||+++|++..... ..++..+......+. +++.+|||++++++||+++++.++
T Consensus       161 Kaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~-~~~~~~~~~~~~~p~-~r~~~pedva~~~~~l~s~~~~~i  238 (252)
T PRK06079        161 KAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIK-GHKDLLKESDSRTVD-GVGVTIEEVGNTAAFLLSDLSTGV  238 (252)
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCC-ChHHHHHHHHhcCcc-cCCCCHHHHHHHHHHHhCcccccc
Confidence            999999999999999999999999999999999864321 122222333333444 889999999999999999999999


Q ss_pred             cccEEEecCceee
Q 024145          247 SGQNLVVDGGFSV  259 (272)
Q Consensus       247 ~G~~i~~dgG~~~  259 (272)
                      +|+++.+|||.++
T Consensus       239 tG~~i~vdgg~~~  251 (252)
T PRK06079        239 TGDIIYVDKGVHL  251 (252)
T ss_pred             cccEEEeCCceec
Confidence            9999999999764

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-46  Score=318.11  Aligned_cols=245  Identities=33%  Similarity=0.493  Sum_probs=210.9

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcc-hHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDK-LGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGK   89 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (272)
                      .+++||++|||||++|||++++++|+++|++|++++|+.. ...+..+..+.++.++.+|++++++++++++++.+.+|+
T Consensus         4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   83 (251)
T PRK12481          4 FDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGH   83 (251)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCC
Confidence            4688999999999999999999999999999999988643 222333445667899999999999999999999999999


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCC-CceEEEEecccccccCCCCchhhhhHH
Q 024145           90 LDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ-KGCILFTASACTEIAGLGSPAYTISKY  168 (272)
Q Consensus        90 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~Y~~sK~  168 (272)
                      +|++|||||....  .++.+.+.++|++++++|+.+++.+++++.++|.+++ .|+||++||..+..+.+....|++||+
T Consensus        84 iD~lv~~ag~~~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asK~  161 (251)
T PRK12481         84 IDILINNAGIIRR--QDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVPSYTASKS  161 (251)
T ss_pred             CCEEEECCCcCCC--CCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCCCcchHHHHH
Confidence            9999999998755  6778899999999999999999999999999997654 689999999999888888999999999


Q ss_pred             HHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccc
Q 024145          169 GILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSG  248 (272)
Q Consensus       169 a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  248 (272)
                      |+++|+++++.|++++||+||+|+||+++|++.......... .+......|. +++.+|||+++.+.||+++.+.+++|
T Consensus       162 a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~~~~-~~~~~~~~p~-~~~~~peeva~~~~~L~s~~~~~~~G  239 (251)
T PRK12481        162 AVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRADTAR-NEAILERIPA-SRWGTPDDLAGPAIFLSSSASDYVTG  239 (251)
T ss_pred             HHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccChHH-HHHHHhcCCC-CCCcCHHHHHHHHHHHhCccccCcCC
Confidence            999999999999999999999999999999987642111111 1222223344 78899999999999999999999999


Q ss_pred             cEEEecCceee
Q 024145          249 QNLVVDGGFSV  259 (272)
Q Consensus       249 ~~i~~dgG~~~  259 (272)
                      +++.+|||+..
T Consensus       240 ~~i~vdgg~~~  250 (251)
T PRK12481        240 YTLAVDGGWLA  250 (251)
T ss_pred             ceEEECCCEec
Confidence            99999999753

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.9e-46  Score=321.00  Aligned_cols=244  Identities=23%  Similarity=0.284  Sum_probs=206.5

Q ss_pred             CCCCcEEEEeCCC--ChHHHHHHHHHHHcCCeEEEeecCcc---hHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHH
Q 024145           12 RLEGKVAIITGGA--SGIGAMAVELFHENGAKVVIADVQDK---LGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus        12 ~l~~k~vlItGas--~giG~aia~~la~~G~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (272)
                      .++||++|||||+  +|||++++++|+++|++|++++|+.+   ..+++.++.+.. .++++|++|.++++++++++.++
T Consensus         2 ~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~~~   80 (274)
T PRK08415          2 IMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSD-YVYELDVSKPEHFKSLAESLKKD   80 (274)
T ss_pred             ccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHHHHH
Confidence            3679999999997  89999999999999999999998753   333344444544 67899999999999999999999


Q ss_pred             hCCccEEEeCCCCCCC--CCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhh
Q 024145           87 FGKLDIMYNNAGILDR--SFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYT  164 (272)
Q Consensus        87 ~g~id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~  164 (272)
                      +|++|+||||||+..+  ...++.+.+.++|++++++|+.+++.+++.++|+|.+  .|+||++||..+..+.+.+..|+
T Consensus        81 ~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~--~g~Iv~isS~~~~~~~~~~~~Y~  158 (274)
T PRK08415         81 LGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLND--GASVLTLSYLGGVKYVPHYNVMG  158 (274)
T ss_pred             cCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhcc--CCcEEEEecCCCccCCCcchhhh
Confidence            9999999999997542  1256788999999999999999999999999999965  48999999999888888899999


Q ss_pred             hhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCC
Q 024145          165 ISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESS  244 (272)
Q Consensus       165 ~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  244 (272)
                      +||+|+.+|+++++.|++++||+||+|+||+++|++..... ......+......|+ +++.+|||++++++||+++++.
T Consensus       159 asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~pl-~r~~~pedva~~v~fL~s~~~~  236 (274)
T PRK08415        159 VAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIG-DFRMILKWNEINAPL-KKNVSIEEVGNSGMYLLSDLSS  236 (274)
T ss_pred             hHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccc-hhhHHhhhhhhhCch-hccCCHHHHHHHHHHHhhhhhh
Confidence            99999999999999999999999999999999998754211 111111222222344 7889999999999999999999


Q ss_pred             CccccEEEecCceeec
Q 024145          245 YVSGQNLVVDGGFSVV  260 (272)
Q Consensus       245 ~~~G~~i~~dgG~~~~  260 (272)
                      +++|+++.+|||..+.
T Consensus       237 ~itG~~i~vdGG~~~~  252 (274)
T PRK08415        237 GVTGEIHYVDAGYNIM  252 (274)
T ss_pred             cccccEEEEcCccccc
Confidence            9999999999998764

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.5e-46  Score=318.96  Aligned_cols=243  Identities=28%  Similarity=0.352  Sum_probs=205.2

Q ss_pred             CCCcEEEEeCCCC--hHHHHHHHHHHHcCCeEEEeecCcchHH---HHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           13 LEGKVAIITGGAS--GIGAMAVELFHENGAKVVIADVQDKLGE---DLADKLGQDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        13 l~~k~vlItGas~--giG~aia~~la~~G~~V~~~~r~~~~~~---~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      ++||++|||||++  |||++++++|+++|++|++++|+....+   ++.++.+. ..++++|++|+++++++++++.+++
T Consensus         5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~-~~~~~~Dv~d~~~v~~~~~~~~~~~   83 (271)
T PRK06505          5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGS-DFVLPCDVEDIASVDAVFEALEKKW   83 (271)
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCC-ceEEeCCCCCHHHHHHHHHHHHHHh
Confidence            6899999999997  9999999999999999999998754322   22233332 3578999999999999999999999


Q ss_pred             CCccEEEeCCCCCCCC--CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhh
Q 024145           88 GKLDIMYNNAGILDRS--FGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTI  165 (272)
Q Consensus        88 g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~  165 (272)
                      |++|+||||||.....  ..++.+.+.++|++++++|+.+++.++++++|+|.+  .|+||++||..+..+.+.+..|++
T Consensus        84 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~--~G~Iv~isS~~~~~~~~~~~~Y~a  161 (271)
T PRK06505         84 GKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD--GGSMLTLTYGGSTRVMPNYNVMGV  161 (271)
T ss_pred             CCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc--CceEEEEcCCCccccCCccchhhh
Confidence            9999999999976431  145778999999999999999999999999999973  489999999998888899999999


Q ss_pred             hHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCC
Q 024145          166 SKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSY  245 (272)
Q Consensus       166 sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  245 (272)
                      ||+|+.+|+++++.|++++||+||+|+||+++|++.... ..............++ +++.+|||++++++||+++.+.+
T Consensus       162 sKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~-~~~~~~~~~~~~~~p~-~r~~~peeva~~~~fL~s~~~~~  239 (271)
T PRK06505        162 AKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGI-GDARAIFSYQQRNSPL-RRTVTIDEVGGSALYLLSDLSSG  239 (271)
T ss_pred             hHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccC-cchHHHHHHHhhcCCc-cccCCHHHHHHHHHHHhCccccc
Confidence            999999999999999999999999999999999986421 1111122222233344 78899999999999999999999


Q ss_pred             ccccEEEecCceeec
Q 024145          246 VSGQNLVVDGGFSVV  260 (272)
Q Consensus       246 ~~G~~i~~dgG~~~~  260 (272)
                      ++|+++.+|||..+.
T Consensus       240 itG~~i~vdgG~~~~  254 (271)
T PRK06505        240 VTGEIHFVDSGYNIV  254 (271)
T ss_pred             cCceEEeecCCcccC
Confidence            999999999998754

>PRK07063 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.2e-46  Score=315.08  Aligned_cols=247  Identities=32%  Similarity=0.471  Sum_probs=215.4

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh-----CCceEEEEecCCCHHHHHHHHHHHHH
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL-----GQDVCYIHCDISNEDEVINLVDTAVS   85 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (272)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+..++..+++     +.++.++.+|++++++++++++++.+
T Consensus         3 ~~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   82 (260)
T PRK07063          3 NRLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEE   82 (260)
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999888777666554     34688999999999999999999999


Q ss_pred             HhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhh
Q 024145           86 KFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTI  165 (272)
Q Consensus        86 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~  165 (272)
                      +++++|++|||||....  .+..+.+.++|++++++|+.+++.++++++|+|.+++.|+||++||..+..+.++...|++
T Consensus        83 ~~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  160 (260)
T PRK07063         83 AFGPLDVLVNNAGINVF--ADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPGCFPYPV  160 (260)
T ss_pred             HhCCCcEEEECCCcCCC--CChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCCCCchHHHH
Confidence            99999999999997654  5567788999999999999999999999999998877899999999999888899999999


Q ss_pred             hHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCC---CChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCC
Q 024145          166 SKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGG---VDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDE  242 (272)
Q Consensus       166 sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  242 (272)
                      ||+|+++|+++++.|++++||+||+|+||+++|++.....   ..++..........++ +++.+|+|+++.++||+++.
T Consensus       161 sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~r~~~~~~va~~~~fl~s~~  239 (260)
T PRK07063        161 AKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPM-KRIGRPEEVAMTAVFLASDE  239 (260)
T ss_pred             HHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcCCC-CCCCCHHHHHHHHHHHcCcc
Confidence            9999999999999999999999999999999999865311   1111122222233444 78999999999999999999


Q ss_pred             CCCccccEEEecCceeec
Q 024145          243 SSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       243 ~~~~~G~~i~~dgG~~~~  260 (272)
                      +.+++|+.+.+|||.++.
T Consensus       240 ~~~itG~~i~vdgg~~~~  257 (260)
T PRK07063        240 APFINATCITIDGGRSVL  257 (260)
T ss_pred             ccccCCcEEEECCCeeee
Confidence            999999999999998764

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=8.4e-46  Score=314.90  Aligned_cols=245  Identities=24%  Similarity=0.301  Sum_probs=205.1

Q ss_pred             CCCCcEEEEeCCCC--hHHHHHHHHHHHcCCeEEEeecCcch---HHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHH
Q 024145           12 RLEGKVAIITGGAS--GIGAMAVELFHENGAKVVIADVQDKL---GEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus        12 ~l~~k~vlItGas~--giG~aia~~la~~G~~V~~~~r~~~~---~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (272)
                      .++||++|||||++  |||++++++|+++|++|++++|+...   .+++.++.+. ..++++|++|+++++++++++.++
T Consensus         5 ~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~-~~~~~~Dv~~~~~v~~~~~~~~~~   83 (260)
T PRK06603          5 LLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGC-NFVSELDVTNPKSISNLFDDIKEK   83 (260)
T ss_pred             ccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCC-ceEEEccCCCHHHHHHHHHHHHHH
Confidence            46899999999997  99999999999999999999887421   2222233333 346789999999999999999999


Q ss_pred             hCCccEEEeCCCCCCCC--CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhh
Q 024145           87 FGKLDIMYNNAGILDRS--FGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYT  164 (272)
Q Consensus        87 ~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~  164 (272)
                      +|++|+||||+|.....  ..++.+.+.++|++.+++|+.+++.+++++.|+|.+  +|+||++||..+..+.+.+..|+
T Consensus        84 ~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~--~G~Iv~isS~~~~~~~~~~~~Y~  161 (260)
T PRK06603         84 WGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHD--GGSIVTLTYYGAEKVIPNYNVMG  161 (260)
T ss_pred             cCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc--CceEEEEecCccccCCCcccchh
Confidence            99999999999975421  246778899999999999999999999999999953  58999999999888888999999


Q ss_pred             hhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCC
Q 024145          165 ISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESS  244 (272)
Q Consensus       165 ~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  244 (272)
                      +||+|+++|+++++.|++++||+||+|+||+++|++........+. .+......|+ +++.+|||++++++||+++++.
T Consensus       162 asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~-~~~~~~~~p~-~r~~~pedva~~~~~L~s~~~~  239 (260)
T PRK06603        162 VAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGDFSTM-LKSHAATAPL-KRNTTQEDVGGAAVYLFSELSK  239 (260)
T ss_pred             hHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCCcHHH-HHHHHhcCCc-CCCCCHHHHHHHHHHHhCcccc
Confidence            9999999999999999999999999999999999986421111122 2222233344 7889999999999999999999


Q ss_pred             CccccEEEecCceeecc
Q 024145          245 YVSGQNLVVDGGFSVVN  261 (272)
Q Consensus       245 ~~~G~~i~~dgG~~~~~  261 (272)
                      +++|+++.+|||+.+..
T Consensus       240 ~itG~~i~vdgG~~~~~  256 (260)
T PRK06603        240 GVTGEIHYVDCGYNIMG  256 (260)
T ss_pred             cCcceEEEeCCcccccC
Confidence            99999999999988753

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=100.00  E-value=8.8e-46  Score=314.43  Aligned_cols=247  Identities=25%  Similarity=0.304  Sum_probs=207.4

Q ss_pred             CCCCCcEEEEeCCC--ChHHHHHHHHHHHcCCeEEEeecCcc--hHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHH
Q 024145           11 KRLEGKVAIITGGA--SGIGAMAVELFHENGAKVVIADVQDK--LGEDLADKL---GQDVCYIHCDISNEDEVINLVDTA   83 (272)
Q Consensus        11 ~~l~~k~vlItGas--~giG~aia~~la~~G~~V~~~~r~~~--~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~   83 (272)
                      .+++||+++||||+  +|||++++++|+++|++|++++|+.+  +.++..+++   ...+.++++|++|+++++++++++
T Consensus         2 ~~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~   81 (258)
T PRK07370          2 LDLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETI   81 (258)
T ss_pred             cccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHH
Confidence            45789999999986  89999999999999999998876433  223333333   235678999999999999999999


Q ss_pred             HHHhCCccEEEeCCCCCCC--CCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCc
Q 024145           84 VSKFGKLDIMYNNAGILDR--SFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSP  161 (272)
Q Consensus        84 ~~~~g~id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  161 (272)
                      .+++|++|+||||||....  ...++.+.+.++|++.+++|+.+++.++++++|+|.+  .|+||++||..+..+.+.+.
T Consensus        82 ~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~~  159 (258)
T PRK07370         82 KQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE--GGSIVTLTYLGGVRAIPNYN  159 (258)
T ss_pred             HHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh--CCeEEEEeccccccCCcccc
Confidence            9999999999999997542  1256788899999999999999999999999999964  48999999999988889999


Q ss_pred             hhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcC
Q 024145          162 AYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASD  241 (272)
Q Consensus       162 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  241 (272)
                      .|++||+|+++|+++++.|++++||+||+|+||+++|++.......++. .+......++ +++.+|+|+++++.||+++
T Consensus       160 ~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~~~~-~~~~~~~~p~-~r~~~~~dva~~~~fl~s~  237 (258)
T PRK07370        160 VMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGILDM-IHHVEEKAPL-RRTVTQTEVGNTAAFLLSD  237 (258)
T ss_pred             hhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccccchhh-hhhhhhcCCc-CcCCCHHHHHHHHHHHhCh
Confidence            9999999999999999999999999999999999999986421111122 2222333344 7899999999999999999


Q ss_pred             CCCCccccEEEecCceeecc
Q 024145          242 ESSYVSGQNLVVDGGFSVVN  261 (272)
Q Consensus       242 ~~~~~~G~~i~~dgG~~~~~  261 (272)
                      ++.+++|+++.+|||.++..
T Consensus       238 ~~~~~tG~~i~vdgg~~~~~  257 (258)
T PRK07370        238 LASGITGQTIYVDAGYCIMG  257 (258)
T ss_pred             hhccccCcEEEECCcccccC
Confidence            99999999999999987753

>PRK08265 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3e-45  Score=311.65  Aligned_cols=248  Identities=30%  Similarity=0.433  Sum_probs=215.1

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGK   89 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (272)
                      |.++++|++|||||++|||++++++|+++|++|++++|+.+..+++.++++.++.++++|+++.++++++++++.+++++
T Consensus         1 m~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   80 (261)
T PRK08265          1 MIGLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGR   80 (261)
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            34578999999999999999999999999999999999988777777777778999999999999999999999999999


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHH
Q 024145           90 LDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYG  169 (272)
Q Consensus        90 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a  169 (272)
                      +|++|||+|....  .. .+.+.++|++.+++|+.+++.+++++.++|. ++.|+||++||..+..+.+++..|+++|++
T Consensus        81 id~lv~~ag~~~~--~~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~g~ii~isS~~~~~~~~~~~~Y~asKaa  156 (261)
T PRK08265         81 VDILVNLACTYLD--DG-LASSRADWLAALDVNLVSAAMLAQAAHPHLA-RGGGAIVNFTSISAKFAQTGRWLYPASKAA  156 (261)
T ss_pred             CCEEEECCCCCCC--Cc-CcCCHHHHHHHHhHhhHHHHHHHHHHHHHHh-cCCcEEEEECchhhccCCCCCchhHHHHHH
Confidence            9999999997643  22 3578899999999999999999999999997 567999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHH-HHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccc
Q 024145          170 ILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALI-ESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSG  248 (272)
Q Consensus       170 ~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  248 (272)
                      +++++++++.|+.++||++|+|+||+++|++........... ........+. +++.+|+|+|++++||+++...+++|
T Consensus       157 ~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~p~dva~~~~~l~s~~~~~~tG  235 (261)
T PRK08265        157 IRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVAAPFHLL-GRVGDPEEVAQVVAFLCSDAASFVTG  235 (261)
T ss_pred             HHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccchhHHHHhhcccCCC-CCccCHHHHHHHHHHHcCccccCccC
Confidence            999999999999999999999999999999865321111111 1111122333 78899999999999999999999999


Q ss_pred             cEEEecCceeeccC
Q 024145          249 QNLVVDGGFSVVNP  262 (272)
Q Consensus       249 ~~i~~dgG~~~~~~  262 (272)
                      +.|.+|||.++..|
T Consensus       236 ~~i~vdgg~~~~~~  249 (261)
T PRK08265        236 ADYAVDGGYSALGP  249 (261)
T ss_pred             cEEEECCCeeccCC
Confidence            99999999987544

>PRK07478 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.1e-45  Score=310.19  Aligned_cols=247  Identities=38%  Similarity=0.577  Sum_probs=215.7

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      +++++|++|||||++|||++++++|+++|++|++++|+++..+++.+++   +.++.++.+|++++++++++++++.+++
T Consensus         2 ~~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (254)
T PRK07478          2 MRLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERF   81 (254)
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            4678999999999999999999999999999999999988777666554   4578899999999999999999999999


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccccc-ccCCCCchhhhh
Q 024145           88 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTE-IAGLGSPAYTIS  166 (272)
Q Consensus        88 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~-~~~~~~~~Y~~s  166 (272)
                      +++|++|||||.... ..++.+.+.+++++.+++|+.+++.+++.++|.|.+++.++||++||..+. .+.+.+..|++|
T Consensus        82 ~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~s  160 (254)
T PRK07478         82 GGLDIAFNNAGTLGE-MGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGFPGMAAYAAS  160 (254)
T ss_pred             CCCCEEEECCCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccCCCCcchhHHH
Confidence            999999999998643 156778899999999999999999999999999988888999999998876 577888999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCc
Q 024145          167 KYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYV  246 (272)
Q Consensus       167 K~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  246 (272)
                      |+|++.++++++.|++++||++++|+||+++|++.+..... +..........+. +++.+|+|+++.++||+++...++
T Consensus       161 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~va~~~~~l~s~~~~~~  238 (254)
T PRK07478        161 KAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDT-PEALAFVAGLHAL-KRMAQPEEIAQAALFLASDAASFV  238 (254)
T ss_pred             HHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCC-HHHHHHHHhcCCC-CCCcCHHHHHHHHHHHcCchhcCC
Confidence            99999999999999999999999999999999987642222 2223333343444 788999999999999999999999


Q ss_pred             cccEEEecCceeec
Q 024145          247 SGQNLVVDGGFSVV  260 (272)
Q Consensus       247 ~G~~i~~dgG~~~~  260 (272)
                      +|+.|.+|||.+++
T Consensus       239 ~G~~~~~dgg~~~~  252 (254)
T PRK07478        239 TGTALLVDGGVSIT  252 (254)
T ss_pred             CCCeEEeCCchhcc
Confidence            99999999998764

>PRK05867 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-45  Score=311.11  Aligned_cols=242  Identities=36%  Similarity=0.527  Sum_probs=210.1

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (272)
                      +++++||++|||||++|||++++++|+++|++|++++|+.+..+++.+++   +.++.++.+|++++++++++++++.++
T Consensus         4 ~~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (253)
T PRK05867          4 LFDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAE   83 (253)
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            45689999999999999999999999999999999999988777766654   457889999999999999999999999


Q ss_pred             hCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCC-CceEEEEecccccccC-C-CCchh
Q 024145           87 FGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ-KGCILFTASACTEIAG-L-GSPAY  163 (272)
Q Consensus        87 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~-~-~~~~Y  163 (272)
                      ++++|+||||+|....  .++.+.+.++|++++++|+.+++.+++++.++|.+++ .|+||++||..+..+. + ....|
T Consensus        84 ~g~id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~Y  161 (253)
T PRK05867         84 LGGIDIAVCNAGIITV--TPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHY  161 (253)
T ss_pred             hCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCCCCccch
Confidence            9999999999998654  6678889999999999999999999999999997654 5789999998776433 3 45789


Q ss_pred             hhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCC
Q 024145          164 TISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDES  243 (272)
Q Consensus       164 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  243 (272)
                      ++||+|+++|+++++.|++++||+||+|+||+++|++...   ..+.. +.+....+. +++.+|+|+|++++||+++++
T Consensus       162 ~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~---~~~~~-~~~~~~~~~-~r~~~p~~va~~~~~L~s~~~  236 (253)
T PRK05867        162 CASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEP---YTEYQ-PLWEPKIPL-GRLGRPEELAGLYLYLASEAS  236 (253)
T ss_pred             HHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCccccc---chHHH-HHHHhcCCC-CCCcCHHHHHHHHHHHcCccc
Confidence            9999999999999999999999999999999999998753   12222 222233344 889999999999999999999


Q ss_pred             CCccccEEEecCcee
Q 024145          244 SYVSGQNLVVDGGFS  258 (272)
Q Consensus       244 ~~~~G~~i~~dgG~~  258 (272)
                      .+++|+.+.+|||++
T Consensus       237 ~~~tG~~i~vdgG~~  251 (253)
T PRK05867        237 SYMTGSDIVIDGGYT  251 (253)
T ss_pred             CCcCCCeEEECCCcc
Confidence            999999999999975

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=100.00  E-value=2.8e-45  Score=296.86  Aligned_cols=227  Identities=29%  Similarity=0.390  Sum_probs=202.5

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhC-CceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLG-QDVCYIHCDISNEDEVINLVDTAVSKFGK   89 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (272)
                      ..+++|+++|||||+|||.+++++|++.|++|+++.|+.++++++.++++ ..+..+.+|++|.++++++++.+.+++++
T Consensus         2 ~~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~   81 (246)
T COG4221           2 TTLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGR   81 (246)
T ss_pred             CCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCc
Confidence            45688999999999999999999999999999999999999999999998 58999999999999999999999999999


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHH
Q 024145           90 LDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYG  169 (272)
Q Consensus        90 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a  169 (272)
                      +|+||||||....  .++.+.+.++|++++++|+.|.++.+++++|.|.+++.|.||++||++|..++++...|+++|++
T Consensus        82 iDiLvNNAGl~~g--~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~~~vY~ATK~a  159 (246)
T COG4221          82 IDILVNNAGLALG--DPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGGAVYGATKAA  159 (246)
T ss_pred             ccEEEecCCCCcC--ChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCCCccchhhHHH
Confidence            9999999998766  78999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccC-CCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCC
Q 024145          170 ILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMK-GGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDES  243 (272)
Q Consensus       170 ~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  243 (272)
                      +.+|++.+..|+..++|||..|+||.+.|..... ......+..+....    .....+|+|+|+.+.|..+.+.
T Consensus       160 V~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~~~~~~~~y~----~~~~l~p~dIA~~V~~~~~~P~  230 (246)
T COG4221         160 VRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEGDDERADKVYK----GGTALTPEDIAEAVLFAATQPQ  230 (246)
T ss_pred             HHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCchhhhHHHHhc----cCCCCCHHHHHHHHHHHHhCCC
Confidence            9999999999999999999999999996654332 11212222222111    1567899999999999987654

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.7e-45  Score=311.93  Aligned_cols=245  Identities=23%  Similarity=0.260  Sum_probs=203.6

Q ss_pred             CCCCCcEEEEeCC--CChHHHHHHHHHHHcCCeEEEeecCcch---HHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHH
Q 024145           11 KRLEGKVAIITGG--ASGIGAMAVELFHENGAKVVIADVQDKL---GEDLADKLGQDVCYIHCDISNEDEVINLVDTAVS   85 (272)
Q Consensus        11 ~~l~~k~vlItGa--s~giG~aia~~la~~G~~V~~~~r~~~~---~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (272)
                      ..++||++|||||  ++|||++++++|+++|++|++++|+...   .+++.++.+ ....+++|++|+++++++++++.+
T Consensus         2 ~~~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~   80 (261)
T PRK08690          2 GFLQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELD-SELVFRCDVASDDEINQVFADLGK   80 (261)
T ss_pred             CccCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccC-CceEEECCCCCHHHHHHHHHHHHH
Confidence            4478999999997  6799999999999999999998876322   222222223 356789999999999999999999


Q ss_pred             HhCCccEEEeCCCCCCCCC--CC-CCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCch
Q 024145           86 KFGKLDIMYNNAGILDRSF--GS-ILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPA  162 (272)
Q Consensus        86 ~~g~id~lv~~ag~~~~~~--~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  162 (272)
                      +++++|++|||||+.....  .+ +.+.+.++|++++++|+.+++.+++++.|+|.++ .|+||++||..+..+.+++..
T Consensus        81 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~-~g~Iv~iss~~~~~~~~~~~~  159 (261)
T PRK08690         81 HWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGR-NSAIVALSYLGAVRAIPNYNV  159 (261)
T ss_pred             HhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhc-CcEEEEEcccccccCCCCccc
Confidence            9999999999999864310  12 3567889999999999999999999999998654 589999999999888899999


Q ss_pred             hhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCC
Q 024145          163 YTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDE  242 (272)
Q Consensus       163 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  242 (272)
                      |++||+|+++|+++++.|++++||+||+|+||+++|++..... ......+......++ +++.+|||+|++++||++++
T Consensus       160 Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~-~~~~~~~~~~~~~p~-~r~~~peevA~~v~~l~s~~  237 (261)
T PRK08690        160 MGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIA-DFGKLLGHVAAHNPL-RRNVTIEEVGNTAAFLLSDL  237 (261)
T ss_pred             chhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCC-chHHHHHHHhhcCCC-CCCCCHHHHHHHHHHHhCcc
Confidence            9999999999999999999999999999999999999865321 112222222333344 88999999999999999999


Q ss_pred             CCCccccEEEecCceee
Q 024145          243 SSYVSGQNLVVDGGFSV  259 (272)
Q Consensus       243 ~~~~~G~~i~~dgG~~~  259 (272)
                      +.+++|++|.+|||..+
T Consensus       238 ~~~~tG~~i~vdgG~~~  254 (261)
T PRK08690        238 SSGITGEITYVDGGYSI  254 (261)
T ss_pred             cCCcceeEEEEcCCccc
Confidence            99999999999999875

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=100.00  E-value=3.9e-45  Score=310.02  Aligned_cols=251  Identities=40%  Similarity=0.588  Sum_probs=215.3

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh------CCceEEEEecCCCHHHHHHHHHHH
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL------GQDVCYIHCDISNEDEVINLVDTA   83 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~   83 (272)
                      +.++.||+++|||+++|||++++++|++.|++|++++|+++..++..+.+      +.++..+.||+++.++++++++..
T Consensus         3 ~~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~   82 (270)
T KOG0725|consen    3 GGRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFA   82 (270)
T ss_pred             CccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHH
Confidence            45689999999999999999999999999999999999999877766554      246899999999999999999999


Q ss_pred             HHH-hCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhH-HHHHHHHHHHHhhcCCCCceEEEEecccccccCCCC-
Q 024145           84 VSK-FGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTI-GGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGS-  160 (272)
Q Consensus        84 ~~~-~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~-~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~-  160 (272)
                      .++ +|++|+||||||..... .+..+.++++|+.++++|+. +.+.+.+.+.+++.+++.|.|+++||..+..+.... 
T Consensus        83 ~~~~~GkidiLvnnag~~~~~-~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~~~~  161 (270)
T KOG0725|consen   83 VEKFFGKIDILVNNAGALGLT-GSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPGSG  161 (270)
T ss_pred             HHHhCCCCCEEEEcCCcCCCC-CChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCCc
Confidence            998 79999999999988763 37899999999999999999 577777778888887789999999999888776555 


Q ss_pred             chhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChh---HHHHH--HhhcCCCCCCCCChHhHHHHH
Q 024145          161 PAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPA---LIESS--MSQMGNLKGEFLKTDGIANAA  235 (272)
Q Consensus       161 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~---~~~~~--~~~~~~~~~~~~~~~dva~~~  235 (272)
                      ..|+++|+|+++|+|++|.|++++|||||+|.||.+.|++ ........   +..+.  .....| .+++..|+|++..+
T Consensus       162 ~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~-~~~~~~~~~~~~~~~~~~~~~~~p-~gr~g~~~eva~~~  239 (270)
T KOG0725|consen  162 VAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSL-RAAGLDDGEMEEFKEATDSKGAVP-LGRVGTPEEVAEAA  239 (270)
T ss_pred             ccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCc-cccccccchhhHHhhhhccccccc-cCCccCHHHHHHhH
Confidence            7999999999999999999999999999999999999998 32222221   22221  122333 49999999999999


Q ss_pred             HHHhcCCCCCccccEEEecCceeeccCc
Q 024145          236 LYLASDESSYVSGQNLVVDGGFSVVNPT  263 (272)
Q Consensus       236 ~~l~s~~~~~~~G~~i~~dgG~~~~~~~  263 (272)
                      .||+++++++++|+.|.+|||.++..+.
T Consensus       240 ~fla~~~asyitG~~i~vdgG~~~~~~~  267 (270)
T KOG0725|consen  240 AFLASDDASYITGQTIIVDGGFTVVGPS  267 (270)
T ss_pred             HhhcCcccccccCCEEEEeCCEEeeccc
Confidence            9999998889999999999999997654

>PRK06114 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.8e-45  Score=309.15  Aligned_cols=246  Identities=29%  Similarity=0.434  Sum_probs=212.2

Q ss_pred             cCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcc-hHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHH
Q 024145            9 PFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDK-LGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAV   84 (272)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~-~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~   84 (272)
                      .+.++++|++|||||++|||++++++|+++|++|++++|+.+ ..++..+++   +.++.++.+|++|+++++++++++.
T Consensus         2 ~~~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~   81 (254)
T PRK06114          2 QLFDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTE   81 (254)
T ss_pred             CccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence            467789999999999999999999999999999999998754 334444433   4578899999999999999999999


Q ss_pred             HHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCC--Cch
Q 024145           85 SKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLG--SPA  162 (272)
Q Consensus        85 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~--~~~  162 (272)
                      ++++++|++|||+|....  .++.+.+.++|++.+++|+.+++.+++++++.|.+++.|+||++||..+..+.+.  +..
T Consensus        82 ~~~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~  159 (254)
T PRK06114         82 AELGALTLAVNAAGIANA--NPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGLLQAH  159 (254)
T ss_pred             HHcCCCCEEEECCCCCCC--CChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCCcch
Confidence            999999999999998754  5678889999999999999999999999999998878899999999988776553  689


Q ss_pred             hhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCC
Q 024145          163 YTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDE  242 (272)
Q Consensus       163 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  242 (272)
                      |+++|+|+++++++++.|+.++||+||+|+||+++|++..... ..+ ..+.+....++ +++.+|||+++.++||+++.
T Consensus       160 Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~~-~~~-~~~~~~~~~p~-~r~~~~~dva~~~~~l~s~~  236 (254)
T PRK06114        160 YNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRPE-MVH-QTKLFEEQTPM-QRMAKVDEMVGPAVFLLSDA  236 (254)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCccccccc-chH-HHHHHHhcCCC-CCCcCHHHHHHHHHHHcCcc
Confidence            9999999999999999999999999999999999999875311 111 12223334454 88999999999999999999


Q ss_pred             CCCccccEEEecCceee
Q 024145          243 SSYVSGQNLVVDGGFSV  259 (272)
Q Consensus       243 ~~~~~G~~i~~dgG~~~  259 (272)
                      +++++|+++.+|||+.+
T Consensus       237 ~~~~tG~~i~~dgg~~~  253 (254)
T PRK06114        237 ASFCTGVDLLVDGGFVC  253 (254)
T ss_pred             ccCcCCceEEECcCEec
Confidence            99999999999999864

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=4.6e-45  Score=310.03  Aligned_cols=245  Identities=24%  Similarity=0.341  Sum_probs=207.0

Q ss_pred             CCCCCCcEEEEeCCC--ChHHHHHHHHHHHcCCeEEEeecCcch---HHHHHHHhCCceEEEEecCCCHHHHHHHHHHHH
Q 024145           10 FKRLEGKVAIITGGA--SGIGAMAVELFHENGAKVVIADVQDKL---GEDLADKLGQDVCYIHCDISNEDEVINLVDTAV   84 (272)
Q Consensus        10 ~~~l~~k~vlItGas--~giG~aia~~la~~G~~V~~~~r~~~~---~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   84 (272)
                      ..+++||++|||||+  +|||++++++|+++|++|++++|+.+.   .+++.++++ ...++++|++|.++++++++++.
T Consensus         5 ~~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~   83 (258)
T PRK07533          5 LLPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELD-APIFLPLDVREPGQLEAVFARIA   83 (258)
T ss_pred             ccccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhc-cceEEecCcCCHHHHHHHHHHHH
Confidence            456799999999998  599999999999999999999987543   233334443 35688999999999999999999


Q ss_pred             HHhCCccEEEeCCCCCCCC--CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCch
Q 024145           85 SKFGKLDIMYNNAGILDRS--FGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPA  162 (272)
Q Consensus        85 ~~~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  162 (272)
                      +++|++|++|||||.....  ..++.+.+.++|++++++|+.+++.+++.++|+|.+  .|+||++||..+..+.+.+..
T Consensus        84 ~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~--~g~Ii~iss~~~~~~~~~~~~  161 (258)
T PRK07533         84 EEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTN--GGSLLTMSYYGAEKVVENYNL  161 (258)
T ss_pred             HHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhcc--CCEEEEEeccccccCCccchh
Confidence            9999999999999975421  246778899999999999999999999999999953  589999999988888888999


Q ss_pred             hhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCC
Q 024145          163 YTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDE  242 (272)
Q Consensus       163 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  242 (272)
                      |++||+|+++|+++++.|++++||+||+|+||+++|++........+.. +......+. +++.+|+|+++.++||++++
T Consensus       162 Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~~~~~~-~~~~~~~p~-~r~~~p~dva~~~~~L~s~~  239 (258)
T PRK07533        162 MGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDFDALL-EDAAERAPL-RRLVDIDDVGAVAAFLASDA  239 (258)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCCcHHHH-HHHHhcCCc-CCCCCHHHHHHHHHHHhChh
Confidence            9999999999999999999999999999999999999865321112222 222233344 78899999999999999999


Q ss_pred             CCCccccEEEecCceee
Q 024145          243 SSYVSGQNLVVDGGFSV  259 (272)
Q Consensus       243 ~~~~~G~~i~~dgG~~~  259 (272)
                      +.+++|+.+.+|||..+
T Consensus       240 ~~~itG~~i~vdgg~~~  256 (258)
T PRK07533        240 ARRLTGNTLYIDGGYHI  256 (258)
T ss_pred             hccccCcEEeeCCcccc
Confidence            99999999999999764

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.4e-45  Score=310.62  Aligned_cols=246  Identities=25%  Similarity=0.328  Sum_probs=208.6

Q ss_pred             CCCCCcEEEEeCCC--ChHHHHHHHHHHHcCCeEEEeecCc---chHHHHHHHh-CCceEEEEecCCCHHHHHHHHHHHH
Q 024145           11 KRLEGKVAIITGGA--SGIGAMAVELFHENGAKVVIADVQD---KLGEDLADKL-GQDVCYIHCDISNEDEVINLVDTAV   84 (272)
Q Consensus        11 ~~l~~k~vlItGas--~giG~aia~~la~~G~~V~~~~r~~---~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~   84 (272)
                      ++++||++|||||+  +|||++++++|+++|++|++++|+.   +..+++.+++ +.++.++++|++|+++++++++++.
T Consensus         3 ~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   82 (257)
T PRK08594          3 LSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIK   82 (257)
T ss_pred             cccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHH
Confidence            56789999999997  8999999999999999999987753   3345555555 3578899999999999999999999


Q ss_pred             HHhCCccEEEeCCCCCCC--CCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCch
Q 024145           85 SKFGKLDIMYNNAGILDR--SFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPA  162 (272)
Q Consensus        85 ~~~g~id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  162 (272)
                      +++|++|++|||||+...  ...++.+.+.++|.+.+++|+.+++.++++++|+|.+  .|+||++||..+..+.+.+..
T Consensus        83 ~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~g~Iv~isS~~~~~~~~~~~~  160 (257)
T PRK08594         83 EEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTE--GGSIVTLTYLGGERVVQNYNV  160 (257)
T ss_pred             HhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhccc--CceEEEEcccCCccCCCCCch
Confidence            999999999999997542  1246678899999999999999999999999999954  589999999999888889999


Q ss_pred             hhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCC
Q 024145          163 YTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDE  242 (272)
Q Consensus       163 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  242 (272)
                      |++||+|+++|+++++.|++++||+||+|+||+++|++.+.... .+...+......++ +++.+|+|+++.++||++++
T Consensus       161 Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~p~-~r~~~p~~va~~~~~l~s~~  238 (257)
T PRK08594        161 MGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGG-FNSILKEIEERAPL-RRTTTQEEVGDTAAFLFSDL  238 (257)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhcc-ccHHHHHHhhcCCc-cccCCHHHHHHHHHHHcCcc
Confidence            99999999999999999999999999999999999997542111 11111222233344 78899999999999999999


Q ss_pred             CCCccccEEEecCceeec
Q 024145          243 SSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       243 ~~~~~G~~i~~dgG~~~~  260 (272)
                      +.+++|+++.+|||+.+.
T Consensus       239 ~~~~tG~~~~~dgg~~~~  256 (257)
T PRK08594        239 SRGVTGENIHVDSGYHII  256 (257)
T ss_pred             cccccceEEEECCchhcc
Confidence            999999999999998653

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.7e-45  Score=310.91  Aligned_cols=248  Identities=21%  Similarity=0.229  Sum_probs=204.8

Q ss_pred             CCCCCcEEEEeCC--CChHHHHHHHHHHHcCCeEEEeecC---cchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHH
Q 024145           11 KRLEGKVAIITGG--ASGIGAMAVELFHENGAKVVIADVQ---DKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVS   85 (272)
Q Consensus        11 ~~l~~k~vlItGa--s~giG~aia~~la~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (272)
                      ..+++|++|||||  ++|||++++++|+++|++|++++|.   .+..+++.++.+. ...+++|++|+++++++++++.+
T Consensus         2 ~~l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~Dv~d~~~v~~~~~~~~~   80 (260)
T PRK06997          2 GFLAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGS-DLVFPCDVASDEQIDALFASLGQ   80 (260)
T ss_pred             CccCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCC-cceeeccCCCHHHHHHHHHHHHH
Confidence            3478999999996  6899999999999999999998654   3333444444443 35789999999999999999999


Q ss_pred             HhCCccEEEeCCCCCCCCC--CC-CCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCch
Q 024145           86 KFGKLDIMYNNAGILDRSF--GS-ILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPA  162 (272)
Q Consensus        86 ~~g~id~lv~~ag~~~~~~--~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  162 (272)
                      ++|++|++|||||......  .+ +.+.+.++|++.+++|+.+++.++++++|+|.  +.|+||++||..+..+.+.+..
T Consensus        81 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~--~~g~Ii~iss~~~~~~~~~~~~  158 (260)
T PRK06997         81 HWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLS--DDASLLTLSYLGAERVVPNYNT  158 (260)
T ss_pred             HhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcC--CCceEEEEeccccccCCCCcch
Confidence            9999999999999764310  12 34678899999999999999999999999994  3589999999998888889999


Q ss_pred             hhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCC
Q 024145          163 YTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDE  242 (272)
Q Consensus       163 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  242 (272)
                      |++||+|+++|+++++.|++++||+||+|+||+++|++..... ..+...+......++ +++.+|||+++++.||++++
T Consensus       159 Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~-~~~~~~~~~~~~~p~-~r~~~pedva~~~~~l~s~~  236 (260)
T PRK06997        159 MGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIK-DFGKILDFVESNAPL-RRNVTIEEVGNVAAFLLSDL  236 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhcccc-chhhHHHHHHhcCcc-cccCCHHHHHHHHHHHhCcc
Confidence            9999999999999999999999999999999999998754211 111222222233344 78899999999999999999


Q ss_pred             CCCccccEEEecCceeeccCc
Q 024145          243 SSYVSGQNLVVDGGFSVVNPT  263 (272)
Q Consensus       243 ~~~~~G~~i~~dgG~~~~~~~  263 (272)
                      +.+++|++|.+|||.++....
T Consensus       237 ~~~itG~~i~vdgg~~~~~~~  257 (260)
T PRK06997        237 ASGVTGEITHVDSGFNAVVGG  257 (260)
T ss_pred             ccCcceeEEEEcCChhhcccc
Confidence            999999999999998876543

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=100.00  E-value=4.9e-45  Score=314.51  Aligned_cols=246  Identities=21%  Similarity=0.211  Sum_probs=203.6

Q ss_pred             CCCCCcEEEEeCC--CChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhC------------C----ceEEEEecC--
Q 024145           11 KRLEGKVAIITGG--ASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLG------------Q----DVCYIHCDI--   70 (272)
Q Consensus        11 ~~l~~k~vlItGa--s~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~------------~----~~~~~~~D~--   70 (272)
                      ++|+||++|||||  |+|||+++|+.|+++|++|++ +|+.+.++++.+.+.            .    ....+.+|+  
T Consensus         5 ~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   83 (303)
T PLN02730          5 IDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVF   83 (303)
T ss_pred             cCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceec
Confidence            3489999999999  899999999999999999998 677666655543331            1    146788898  


Q ss_pred             CC------------------HHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHH
Q 024145           71 SN------------------EDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKH  132 (272)
Q Consensus        71 ~~------------------~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~  132 (272)
                      ++                  .++++++++++.+++|++|+||||||......+++.+.+.++|++++++|+.+++.++++
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~  163 (303)
T PLN02730         84 DTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQH  163 (303)
T ss_pred             CccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHH
Confidence            43                  448999999999999999999999986432226788999999999999999999999999


Q ss_pred             HHHhhcCCCCceEEEEecccccccCCCC-chhhhhHHHHHHHHHHHHHHhcC-CCcEEEEEeCCcccCCcccCCCCChhH
Q 024145          133 AARVMVPQQKGCILFTASACTEIAGLGS-PAYTISKYGILGLVKCLAAELGQ-YGIRVNCVSPYGLATGMSMKGGVDPAL  210 (272)
Q Consensus       133 ~~~~~~~~~~g~iv~iss~~~~~~~~~~-~~Y~~sK~a~~~~~~~la~e~~~-~gi~v~~i~Pg~v~t~~~~~~~~~~~~  210 (272)
                      ++|+|.++  |+||++||..+..+.+.+ ..|++||+|+++|+++++.|+++ +||+||+|+||+++|++.+.. ...++
T Consensus       164 ~~p~m~~~--G~II~isS~a~~~~~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~~-~~~~~  240 (303)
T PLN02730        164 FGPIMNPG--GASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKAI-GFIDD  240 (303)
T ss_pred             HHHHHhcC--CEEEEEechhhcCCCCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhcc-cccHH
Confidence            99999653  999999999988888765 48999999999999999999986 799999999999999997631 11122


Q ss_pred             HHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccccEEEecCceeecc
Q 024145          211 IESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVVN  261 (272)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~  261 (272)
                      ..+......++ +++.+|+|++++++||+++++.+++|+++.+|||+++..
T Consensus       241 ~~~~~~~~~pl-~r~~~peevA~~~~fLaS~~a~~itG~~l~vdGG~~~~g  290 (303)
T PLN02730        241 MIEYSYANAPL-QKELTADEVGNAAAFLASPLASAITGATIYVDNGLNAMG  290 (303)
T ss_pred             HHHHHHhcCCC-CCCcCHHHHHHHHHHHhCccccCccCCEEEECCCccccc
Confidence            22222222343 688999999999999999999999999999999988753

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=7.8e-45  Score=310.82  Aligned_cols=245  Identities=27%  Similarity=0.317  Sum_probs=206.1

Q ss_pred             CCCCCcEEEEeCCC--ChHHHHHHHHHHHcCCeEEEeecCc---chHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHH
Q 024145           11 KRLEGKVAIITGGA--SGIGAMAVELFHENGAKVVIADVQD---KLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVS   85 (272)
Q Consensus        11 ~~l~~k~vlItGas--~giG~aia~~la~~G~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (272)
                      ..++||++|||||+  +|||++++++|+++|++|++++|+.   +..+++.++++ ...++++|++|+++++++++++.+
T Consensus         6 ~~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~   84 (272)
T PRK08159          6 GLMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELG-AFVAGHCDVTDEASIDAVFETLEK   84 (272)
T ss_pred             ccccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcC-CceEEecCCCCHHHHHHHHHHHHH
Confidence            34688999999997  8999999999999999999998864   23334444444 356789999999999999999999


Q ss_pred             HhCCccEEEeCCCCCCCC--CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchh
Q 024145           86 KFGKLDIMYNNAGILDRS--FGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAY  163 (272)
Q Consensus        86 ~~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y  163 (272)
                      ++|++|++|||||+....  ..++.+.+.++|++.+++|+.+++.+++.++|+|.+  .|+||++||..+..+.+.+..|
T Consensus        85 ~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~Iv~iss~~~~~~~p~~~~Y  162 (272)
T PRK08159         85 KWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTD--GGSILTLTYYGAEKVMPHYNVM  162 (272)
T ss_pred             hcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCC--CceEEEEeccccccCCCcchhh
Confidence            999999999999986431  246778899999999999999999999999999954  5899999999888888999999


Q ss_pred             hhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCC
Q 024145          164 TISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDES  243 (272)
Q Consensus       164 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  243 (272)
                      ++||+|+++|+++++.|++++||+||+|+||+++|++.... ........+.....++ +++.+|||+|++++||+++++
T Consensus       163 ~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~p~-~r~~~peevA~~~~~L~s~~~  240 (272)
T PRK08159        163 GVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGI-GDFRYILKWNEYNAPL-RRTVTIEEVGDSALYLLSDLS  240 (272)
T ss_pred             hhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcC-CcchHHHHHHHhCCcc-cccCCHHHHHHHHHHHhCccc
Confidence            99999999999999999999999999999999999876421 1111122222223344 788999999999999999999


Q ss_pred             CCccccEEEecCceeec
Q 024145          244 SYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       244 ~~~~G~~i~~dgG~~~~  260 (272)
                      .+++|++|.+|||+...
T Consensus       241 ~~itG~~i~vdgG~~~~  257 (272)
T PRK08159        241 RGVTGEVHHVDSGYHVV  257 (272)
T ss_pred             cCccceEEEECCCceee
Confidence            99999999999998754

>PRK08589 short chain dehydrogenase; Validated

Probab=100.00  E-value=2.5e-44  Score=307.81  Aligned_cols=245  Identities=31%  Similarity=0.513  Sum_probs=210.0

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      .+++||++|||||++|||++++++|+++|++|++++|+ +..++..+++   +.++.++.+|++++++++++++++.+++
T Consensus         2 ~~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   80 (272)
T PRK08589          2 KRLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQF   80 (272)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            35789999999999999999999999999999999998 6555555544   4568999999999999999999999999


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhH
Q 024145           88 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISK  167 (272)
Q Consensus        88 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK  167 (272)
                      +++|+||||||.... ..++.+.+.+.|++++++|+.+++.++++++|+|.+++ |+||++||..+..+.+....|++||
T Consensus        81 g~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asK  158 (272)
T PRK08589         81 GRVDVLFNNAGVDNA-AGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQAADLYRSGYNAAK  158 (272)
T ss_pred             CCcCEEEECCCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhcCCCCCCchHHHHH
Confidence            999999999998643 24677889999999999999999999999999998654 8999999999988888899999999


Q ss_pred             HHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChh-HHHHHH----hhcCCCCCCCCChHhHHHHHHHHhcCC
Q 024145          168 YGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPA-LIESSM----SQMGNLKGEFLKTDGIANAALYLASDE  242 (272)
Q Consensus       168 ~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~-~~~~~~----~~~~~~~~~~~~~~dva~~~~~l~s~~  242 (272)
                      +|+++|+++++.|++++||+||+|+||+++|++........+ ...+.+    ....++ +++.+|+|+++.++||+++.
T Consensus       159 aal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~va~~~~~l~s~~  237 (272)
T PRK08589        159 GAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTPL-GRLGKPEEVAKLVVFLASDD  237 (272)
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhccCCC-CCCcCHHHHHHHHHHHcCch
Confidence            999999999999999999999999999999998753211111 111111    112333 78899999999999999999


Q ss_pred             CCCccccEEEecCceee
Q 024145          243 SSYVSGQNLVVDGGFSV  259 (272)
Q Consensus       243 ~~~~~G~~i~~dgG~~~  259 (272)
                      ..+++|+++.+|||...
T Consensus       238 ~~~~~G~~i~vdgg~~~  254 (272)
T PRK08589        238 SSFITGETIRIDGGVMA  254 (272)
T ss_pred             hcCcCCCEEEECCCccc
Confidence            99999999999999764

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.2e-44  Score=305.53  Aligned_cols=245  Identities=26%  Similarity=0.296  Sum_probs=205.4

Q ss_pred             CCCCCcEEEEeCC--CChHHHHHHHHHHHcCCeEEEeecCc--chHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHH
Q 024145           11 KRLEGKVAIITGG--ASGIGAMAVELFHENGAKVVIADVQD--KLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus        11 ~~l~~k~vlItGa--s~giG~aia~~la~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (272)
                      .++++|+++||||  ++|||++++++|+++|++|++++|+.  +..+++.++++.++.++++|++|+++++++++++.++
T Consensus         3 ~~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~   82 (256)
T PRK07889          3 GLLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREH   82 (256)
T ss_pred             ccccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHH
Confidence            4578999999999  89999999999999999999998764  3345565666667889999999999999999999999


Q ss_pred             hCCccEEEeCCCCCCCC--CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhh
Q 024145           87 FGKLDIMYNNAGILDRS--FGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYT  164 (272)
Q Consensus        87 ~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~  164 (272)
                      ++++|++|||||+....  ..++.+.++++|++++++|+.+++.+++.++|+|.+  .|+||++++.. ..+.+.+..|+
T Consensus        83 ~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~--~g~Iv~is~~~-~~~~~~~~~Y~  159 (256)
T PRK07889         83 VDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNE--GGSIVGLDFDA-TVAWPAYDWMG  159 (256)
T ss_pred             cCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhccc--CceEEEEeecc-cccCCccchhH
Confidence            99999999999986421  135677889999999999999999999999999963  48999998753 45567788899


Q ss_pred             hhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCC-CCCChHhHHHHHHHHhcCCC
Q 024145          165 ISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKG-EFLKTDGIANAALYLASDES  243 (272)
Q Consensus       165 ~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~dva~~~~~l~s~~~  243 (272)
                      +||+|+++|+++++.|++++||+||+|+||+++|++.+... ..+...+.+....++ + ++.+|+|+|+.++||+++.+
T Consensus       160 asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~p~-~~~~~~p~evA~~v~~l~s~~~  237 (256)
T PRK07889        160 VAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIP-GFELLEEGWDERAPL-GWDVKDPTPVARAVVALLSDWF  237 (256)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhccc-CcHHHHHHHHhcCcc-ccccCCHHHHHHHHHHHhCccc
Confidence            99999999999999999999999999999999999865321 112222222333344 4 68999999999999999999


Q ss_pred             CCccccEEEecCceeec
Q 024145          244 SYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       244 ~~~~G~~i~~dgG~~~~  260 (272)
                      .+++|+++.+|||....
T Consensus       238 ~~~tG~~i~vdgg~~~~  254 (256)
T PRK07889        238 PATTGEIVHVDGGAHAM  254 (256)
T ss_pred             ccccceEEEEcCceecc
Confidence            99999999999998754

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=3.5e-44  Score=303.72  Aligned_cols=247  Identities=28%  Similarity=0.397  Sum_probs=217.7

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (272)
                      ++++++|++|||||++|||++++++|+++|++|++++|+++..++..+++   +.++.++.+|++|+++++++++++.++
T Consensus         4 ~~~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   83 (254)
T PRK08085          4 LFSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKD   83 (254)
T ss_pred             cccCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHh
Confidence            45689999999999999999999999999999999999987776666555   346788999999999999999999999


Q ss_pred             hCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhh
Q 024145           87 FGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTIS  166 (272)
Q Consensus        87 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~s  166 (272)
                      ++++|++|||+|....  .++.+.+.++|++.+++|+.+++.+++++.+++.+++.++||++||..+..+.+....|+++
T Consensus        84 ~~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  161 (254)
T PRK08085         84 IGPIDVLINNAGIQRR--HPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGRDTITPYAAS  161 (254)
T ss_pred             cCCCCEEEECCCcCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCCCCCcchHHH
Confidence            9999999999997654  67788899999999999999999999999999987778999999999988888899999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCc
Q 024145          167 KYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYV  246 (272)
Q Consensus       167 K~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  246 (272)
                      |+|++.++++++.|++++||++|+|+||+++|++....... +...+......++ +++.+|||++++++||+++.+.++
T Consensus       162 K~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~-~~~~~~~~~~~p~-~~~~~~~~va~~~~~l~~~~~~~i  239 (254)
T PRK08085        162 KGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVED-EAFTAWLCKRTPA-ARWGDPQELIGAAVFLSSKASDFV  239 (254)
T ss_pred             HHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccC-HHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCccccCC
Confidence            99999999999999999999999999999999987642221 2233334444454 889999999999999999999999


Q ss_pred             cccEEEecCceeec
Q 024145          247 SGQNLVVDGGFSVV  260 (272)
Q Consensus       247 ~G~~i~~dgG~~~~  260 (272)
                      +|+.+.+|||+...
T Consensus       240 ~G~~i~~dgg~~~~  253 (254)
T PRK08085        240 NGHLLFVDGGMLVA  253 (254)
T ss_pred             cCCEEEECCCeeec
Confidence            99999999998653

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-44  Score=305.84  Aligned_cols=248  Identities=24%  Similarity=0.336  Sum_probs=211.1

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeec-CcchHHHHHHHh----CCceEEEEecCCCHHHHHHHHHHHH
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADV-QDKLGEDLADKL----GQDVCYIHCDISNEDEVINLVDTAV   84 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r-~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~   84 (272)
                      +.+++||++|||||++|||++++++|+++|++|++++| +++..+...+++    +.++.++.+|++|+++++++++++.
T Consensus         3 ~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   82 (260)
T PRK08416          3 SNEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKID   82 (260)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence            45689999999999999999999999999999988865 444444444333    4578999999999999999999999


Q ss_pred             HHhCCccEEEeCCCCCCC----CCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCC
Q 024145           85 SKFGKLDIMYNNAGILDR----SFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGS  160 (272)
Q Consensus        85 ~~~g~id~lv~~ag~~~~----~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~  160 (272)
                      ++++++|++|||||....    ...++.+.+.+++++.+++|+.+++.+++.++|.|.+++.|+||++||..+..+.+.+
T Consensus        83 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  162 (260)
T PRK08416         83 EDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYIENY  162 (260)
T ss_pred             HhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccCCCCc
Confidence            999999999999987532    1245677888999999999999999999999999988778999999999988888899


Q ss_pred             chhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhc
Q 024145          161 PAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLAS  240 (272)
Q Consensus       161 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  240 (272)
                      ..|++||+|+++|+++++.|+.++||+||+|+||+++|++..... ..+...+......+. +++.+|+|++++++||++
T Consensus       163 ~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~-~~~~~~~~~~~~~~~-~r~~~p~~va~~~~~l~~  240 (260)
T PRK08416        163 AGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFT-NYEEVKAKTEELSPL-NRMGQPEDLAGACLFLCS  240 (260)
T ss_pred             ccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhcc-CCHHHHHHHHhcCCC-CCCCCHHHHHHHHHHHcC
Confidence            999999999999999999999999999999999999999865321 112223333333444 788999999999999999


Q ss_pred             CCCCCccccEEEecCceee
Q 024145          241 DESSYVSGQNLVVDGGFSV  259 (272)
Q Consensus       241 ~~~~~~~G~~i~~dgG~~~  259 (272)
                      +.+.+++|+.+.+|||..+
T Consensus       241 ~~~~~~~G~~i~vdgg~~~  259 (260)
T PRK08416        241 EKASWLTGQTIVVDGGTTF  259 (260)
T ss_pred             hhhhcccCcEEEEcCCeec
Confidence            9999999999999999764

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3e-44  Score=305.49  Aligned_cols=242  Identities=19%  Similarity=0.236  Sum_probs=200.9

Q ss_pred             CCCcEEEEeCCCC--hHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           13 LEGKVAIITGGAS--GIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        13 l~~k~vlItGas~--giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      ++||++|||||++  |||++++++|+++|++|++++|+. ..++..+++   ...+.++.+|++|+++++++++++.+++
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVW   82 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecch-hHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhc
Confidence            6899999999986  999999999999999999998873 222333333   2346789999999999999999999999


Q ss_pred             CCccEEEeCCCCCCCCC---CCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhh
Q 024145           88 GKLDIMYNNAGILDRSF---GSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYT  164 (272)
Q Consensus        88 g~id~lv~~ag~~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~  164 (272)
                      |++|++|||||+.....   ..+.+.+.++|++.+++|+.+++.+++.+.|.+.  ++|+||++||..+..+.+.+..|+
T Consensus        83 g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~g~Iv~iss~~~~~~~~~~~~Y~  160 (262)
T PRK07984         83 PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLN--PGSALLTLSYLGAERAIPNYNVMG  160 (262)
T ss_pred             CCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhc--CCcEEEEEecCCCCCCCCCcchhH
Confidence            99999999999754310   1255678999999999999999999999988664  358999999998888888999999


Q ss_pred             hhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCC
Q 024145          165 ISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESS  244 (272)
Q Consensus       165 ~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  244 (272)
                      +||+|+++|+++++.|++++||+||+|+||+++|++.... .......+......+. +++.+|+|++++++||+++.+.
T Consensus       161 asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~-~~~~~~~~~~~~~~p~-~r~~~pedva~~~~~L~s~~~~  238 (262)
T PRK07984        161 LAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGI-KDFRKMLAHCEAVTPI-RRTVTIEDVGNSAAFLCSDLSA  238 (262)
T ss_pred             HHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcC-CchHHHHHHHHHcCCC-cCCCCHHHHHHHHHHHcCcccc
Confidence            9999999999999999999999999999999999875421 1111222222233344 7899999999999999999999


Q ss_pred             CccccEEEecCceee
Q 024145          245 YVSGQNLVVDGGFSV  259 (272)
Q Consensus       245 ~~~G~~i~~dgG~~~  259 (272)
                      +++|+++.+|||..+
T Consensus       239 ~itG~~i~vdgg~~~  253 (262)
T PRK07984        239 GISGEVVHVDGGFSI  253 (262)
T ss_pred             cccCcEEEECCCccc
Confidence            999999999999765

>PRK07062 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.5e-44  Score=304.88  Aligned_cols=247  Identities=28%  Similarity=0.377  Sum_probs=213.5

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh-----CCceEEEEecCCCHHHHHHHHHHHHH
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL-----GQDVCYIHCDISNEDEVINLVDTAVS   85 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (272)
                      .+++||++|||||++|||++++++|+++|++|++++|+++..++..+++     +.++.++.+|++|.++++++++++.+
T Consensus         4 ~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   83 (265)
T PRK07062          4 IQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEA   83 (265)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999987766655544     23688899999999999999999999


Q ss_pred             HhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhh
Q 024145           86 KFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTI  165 (272)
Q Consensus        86 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~  165 (272)
                      +++++|+||||||....  .++.+.+.++|.+.+++|+.+++.+++.++|+|.+++.|+||++||..+..+.+....|++
T Consensus        84 ~~g~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~a  161 (265)
T PRK07062         84 RFGGVDMLVNNAGQGRV--STFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEPHMVATSA  161 (265)
T ss_pred             hcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCCCCchHhHH
Confidence            99999999999998654  6788889999999999999999999999999998877899999999999888889999999


Q ss_pred             hHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCC-------ChhHHHHHH--hhcCCCCCCCCChHhHHHHHH
Q 024145          166 SKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGV-------DPALIESSM--SQMGNLKGEFLKTDGIANAAL  236 (272)
Q Consensus       166 sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~-------~~~~~~~~~--~~~~~~~~~~~~~~dva~~~~  236 (272)
                      +|+|+++|+++++.|+.++||+||+|+||+++|++......       ..+...+..  ....++ +++.+|+|++++++
T Consensus       162 sKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~p~~va~~~~  240 (265)
T PRK07062        162 ARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIPL-GRLGRPDEAARALF  240 (265)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCCc-CCCCCHHHHHHHHH
Confidence            99999999999999999999999999999999998652110       001111111  122344 78999999999999


Q ss_pred             HHhcCCCCCccccEEEecCceeec
Q 024145          237 YLASDESSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       237 ~l~s~~~~~~~G~~i~~dgG~~~~  260 (272)
                      ||+++.+.+++|+++.+|||+...
T Consensus       241 ~L~s~~~~~~tG~~i~vdgg~~~~  264 (265)
T PRK07062        241 FLASPLSSYTTGSHIDVSGGFARH  264 (265)
T ss_pred             HHhCchhcccccceEEEcCceEee
Confidence            999998999999999999998764

>PRK06398 aldose dehydrogenase; Validated

Probab=100.00  E-value=3.3e-44  Score=304.74  Aligned_cols=246  Identities=34%  Similarity=0.512  Sum_probs=213.0

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      .+++||++|||||++|||++++++|+++|++|++++|+....        .++.++++|++++++++++++++.++++++
T Consensus         2 ~~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~--------~~~~~~~~D~~~~~~i~~~~~~~~~~~~~i   73 (258)
T PRK06398          2 LGLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY--------NDVDYFKVDVSNKEQVIKGIDYVISKYGRI   73 (258)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc--------CceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            467899999999999999999999999999999999876532        257899999999999999999999999999


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHH
Q 024145           91 DIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGI  170 (272)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~  170 (272)
                      |++|||||....  .++.+.+.++|++++++|+.+++.++++++|+|.+++.|+||++||..+..+.+++..|++||+|+
T Consensus        74 d~li~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaal  151 (258)
T PRK06398         74 DILVNNAGIESY--GAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTRNAAAYVTSKHAV  151 (258)
T ss_pred             CEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCCCCchhhhhHHHH
Confidence            999999998654  678889999999999999999999999999999887789999999999998899999999999999


Q ss_pred             HHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCC-----CChhHHHH---HHhhcCCCCCCCCChHhHHHHHHHHhcCC
Q 024145          171 LGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGG-----VDPALIES---SMSQMGNLKGEFLKTDGIANAALYLASDE  242 (272)
Q Consensus       171 ~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~-----~~~~~~~~---~~~~~~~~~~~~~~~~dva~~~~~l~s~~  242 (272)
                      ++++++++.|+.++ |+||+|+||+++|++.....     ..++...+   .+....++ +++.+|+|++++++||+++.
T Consensus       152 ~~~~~~la~e~~~~-i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~eva~~~~~l~s~~  229 (258)
T PRK06398        152 LGLTRSIAVDYAPT-IRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMHPM-KRVGKPEEVAYVVAFLASDL  229 (258)
T ss_pred             HHHHHHHHHHhCCC-CEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhhhcCCc-CCCcCHHHHHHHHHHHcCcc
Confidence            99999999999875 99999999999999865321     11111111   11222334 78899999999999999999


Q ss_pred             CCCccccEEEecCceeeccCcccccc
Q 024145          243 SSYVSGQNLVVDGGFSVVNPTVMRAY  268 (272)
Q Consensus       243 ~~~~~G~~i~~dgG~~~~~~~~~~~~  268 (272)
                      +.+++|+++.+|||.....|-..+++
T Consensus       230 ~~~~~G~~i~~dgg~~~~~~~~~~~~  255 (258)
T PRK06398        230 ASFITGECVTVDGGLRALIPLSTPKI  255 (258)
T ss_pred             cCCCCCcEEEECCccccCCCCCCCCc
Confidence            99999999999999988777665554

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=100.00  E-value=3.9e-44  Score=305.04  Aligned_cols=248  Identities=33%  Similarity=0.491  Sum_probs=212.2

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      ..+++|++|||||++|||++++++|+++|++|++++|+++..+++.++++.++.++++|++++++++++++++.++++++
T Consensus         2 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   81 (263)
T PRK06200          2 GWLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKL   81 (263)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            34789999999999999999999999999999999999888877777777778999999999999999999999999999


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHH----HHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhh
Q 024145           91 DIMYNNAGILDRSFGSILDTPKSD----LERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTIS  166 (272)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~----~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~s  166 (272)
                      |++|||+|+.... .++.+.+.++    |++++++|+.+++.+++.++|.|.++ .|+||+++|..+..+.++...|++|
T Consensus        82 d~li~~ag~~~~~-~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~Y~~s  159 (263)
T PRK06200         82 DCFVGNAGIWDYN-TSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKAS-GGSMIFTLSNSSFYPGGGGPLYTAS  159 (263)
T ss_pred             CEEEECCCCcccC-CCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhc-CCEEEEECChhhcCCCCCCchhHHH
Confidence            9999999975421 3455666655    88999999999999999999998754 5899999999998888888999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCC--------ChhHHHHHHhhcCCCCCCCCChHhHHHHHHHH
Q 024145          167 KYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGV--------DPALIESSMSQMGNLKGEFLKTDGIANAALYL  238 (272)
Q Consensus       167 K~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  238 (272)
                      |+|++.|+++++.|++++ |+||+|+||+++|++......        ..+...+......|+ +++.+|+|++++++||
T Consensus       160 K~a~~~~~~~la~el~~~-Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~~~eva~~~~fl  237 (263)
T PRK06200        160 KHAVVGLVRQLAYELAPK-IRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITPL-QFAPQPEDHTGPYVLL  237 (263)
T ss_pred             HHHHHHHHHHHHHHHhcC-cEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhcCCCC-CCCCCHHHHhhhhhhe
Confidence            999999999999999884 999999999999998642110        111122333344454 8999999999999999


Q ss_pred             hcCC-CCCccccEEEecCceeeccC
Q 024145          239 ASDE-SSYVSGQNLVVDGGFSVVNP  262 (272)
Q Consensus       239 ~s~~-~~~~~G~~i~~dgG~~~~~~  262 (272)
                      +++. +.+++|+.|.+|||+.+..|
T Consensus       238 ~s~~~~~~itG~~i~vdgG~~~~~~  262 (263)
T PRK06200        238 ASRRNSRALTGVVINADGGLGIRGI  262 (263)
T ss_pred             ecccccCcccceEEEEcCceeeccc
Confidence            9998 99999999999999887654

>PRK07791 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.8e-44  Score=307.57  Aligned_cols=246  Identities=31%  Similarity=0.471  Sum_probs=210.4

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCc---------chHHHHHHHh---CCceEEEEecCCCHHHHHHH
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQD---------KLGEDLADKL---GQDVCYIHCDISNEDEVINL   79 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~---------~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~   79 (272)
                      .++||++|||||++|||++++++|+++|++|++++|+.         +..++..+++   +.++.++.+|++|.++++++
T Consensus         3 ~l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~   82 (286)
T PRK07791          3 LLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANL   82 (286)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHH
Confidence            47899999999999999999999999999999998765         4455555544   45788999999999999999


Q ss_pred             HHHHHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCC------CceEEEEecccc
Q 024145           80 VDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ------KGCILFTASACT  153 (272)
Q Consensus        80 ~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~------~g~iv~iss~~~  153 (272)
                      ++++.+++|++|++|||||+...  .++.+.+.++|++++++|+.+++.++++++|+|.++.      .|+||++||..+
T Consensus        83 ~~~~~~~~g~id~lv~nAG~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~  160 (286)
T PRK07791         83 VDAAVETFGGLDVLVNNAGILRD--RMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAG  160 (286)
T ss_pred             HHHHHHhcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhh
Confidence            99999999999999999998654  5788899999999999999999999999999996532      379999999999


Q ss_pred             cccCCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCC--CCCChHhH
Q 024145          154 EIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKG--EFLKTDGI  231 (272)
Q Consensus       154 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~dv  231 (272)
                      ..+.+++..|++||+|+++|+++++.|++++||+||+|+|| ++|++....      ....... .+. +  ++.+|||+
T Consensus       161 ~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~~~------~~~~~~~-~~~-~~~~~~~pedv  231 (286)
T PRK07791        161 LQGSVGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTETV------FAEMMAK-PEE-GEFDAMAPENV  231 (286)
T ss_pred             CcCCCCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcchhh------HHHHHhc-Ccc-cccCCCCHHHH
Confidence            99999999999999999999999999999999999999999 788875421      1111111 121 2  45799999


Q ss_pred             HHHHHHHhcCCCCCccccEEEecCceeeccCcccccc
Q 024145          232 ANAALYLASDESSYVSGQNLVVDGGFSVVNPTVMRAY  268 (272)
Q Consensus       232 a~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~~~~~~  268 (272)
                      +++++||+++.+.+++|++|.+|||.....+.....+
T Consensus       232 a~~~~~L~s~~~~~itG~~i~vdgG~~~~~~~~~~~~  268 (286)
T PRK07791        232 SPLVVWLGSAESRDVTGKVFEVEGGKISVAEGWRHGP  268 (286)
T ss_pred             HHHHHHHhCchhcCCCCcEEEEcCCceEEechhhccc
Confidence            9999999999999999999999999998766655444

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-43  Score=301.67  Aligned_cols=244  Identities=20%  Similarity=0.227  Sum_probs=208.9

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhC--CceEEEEecCCCHHHHHHHHHHHHHHhCCccEEE
Q 024145           17 VAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLG--QDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMY   94 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv   94 (272)
                      ++|||||++|||++++++|+++|++|++++|+++..++..+++.  .++.++++|++|+++++++++++.++++++|+||
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li   81 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDALV   81 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            69999999999999999999999999999999887776666552  3688899999999999999999999999999999


Q ss_pred             eCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhc-CCCCceEEEEecccccccCCCCchhhhhHHHHHHH
Q 024145           95 NNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMV-PQQKGCILFTASACTEIAGLGSPAYTISKYGILGL  173 (272)
Q Consensus        95 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~  173 (272)
                      ||+|.....+.++.+.+.++|.+.+++|+.+++.+++.+++.|. +++.|+||++||..+..+.+....|++||+|+++|
T Consensus        82 ~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sKaa~~~~  161 (259)
T PRK08340         82 WNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPMPPLVLADVTRAGLVQL  161 (259)
T ss_pred             ECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCCCCchHHHHHHHHHHHH
Confidence            99997543225677888999999999999999999999999886 45679999999999988888899999999999999


Q ss_pred             HHHHHHHhcCCCcEEEEEeCCcccCCcccCCC--------CChhH-HHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCC
Q 024145          174 VKCLAAELGQYGIRVNCVSPYGLATGMSMKGG--------VDPAL-IESSMSQMGNLKGEFLKTDGIANAALYLASDESS  244 (272)
Q Consensus       174 ~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~--------~~~~~-~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  244 (272)
                      +++++.|++++||+||+|+||+++|++.+...        ...++ ..+......|+ +++.+|+|+|++++||++++++
T Consensus       162 ~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~p~dva~~~~fL~s~~~~  240 (259)
T PRK08340        162 AKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERTPL-KRTGRWEELGSLIAFLLSENAE  240 (259)
T ss_pred             HHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhccCCc-cCCCCHHHHHHHHHHHcCcccc
Confidence            99999999999999999999999999864210        01111 11122223344 8899999999999999999999


Q ss_pred             CccccEEEecCceeecc
Q 024145          245 YVSGQNLVVDGGFSVVN  261 (272)
Q Consensus       245 ~~~G~~i~~dgG~~~~~  261 (272)
                      +++|+++.+|||...+.
T Consensus       241 ~itG~~i~vdgg~~~~~  257 (259)
T PRK08340        241 YMLGSTIVFDGAMTRGV  257 (259)
T ss_pred             cccCceEeecCCcCCCC
Confidence            99999999999987653

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=100.00  E-value=1.9e-43  Score=299.24  Aligned_cols=246  Identities=27%  Similarity=0.437  Sum_probs=209.7

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcch-HHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKL-GEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      ..+++||++||||+++|||++++++|+++|++|++++++... ..+..+..+.++..+++|++|.++++++++++.++++
T Consensus         5 ~~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   84 (253)
T PRK08993          5 AFSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFG   84 (253)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            456899999999999999999999999999999988775431 1122233456788999999999999999999999999


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCC-CceEEEEecccccccCCCCchhhhhH
Q 024145           89 KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ-KGCILFTASACTEIAGLGSPAYTISK  167 (272)
Q Consensus        89 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~Y~~sK  167 (272)
                      ++|++|||||....  .++.+.+.++|++.+++|+.+++.+++++.++|.+++ .|+||++||..+..+.+....|++||
T Consensus        85 ~~D~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  162 (253)
T PRK08993         85 HIDILVNNAGLIRR--EDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTASK  162 (253)
T ss_pred             CCCEEEECCCCCCC--CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCCCcchHHHH
Confidence            99999999998654  5678889999999999999999999999999997654 68999999999888888889999999


Q ss_pred             HHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCcc
Q 024145          168 YGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVS  247 (272)
Q Consensus       168 ~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  247 (272)
                      +|+++++++++.|+.++||+||.|+||+++|++...... .+...+......+. +++.+|+|+++.++||+++.+.+++
T Consensus       163 aa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~-~~~~~~~~~~~~p~-~r~~~p~eva~~~~~l~s~~~~~~~  240 (253)
T PRK08993        163 SGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRA-DEQRSAEILDRIPA-GRWGLPSDLMGPVVFLASSASDYIN  240 (253)
T ss_pred             HHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhcc-chHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCccccCcc
Confidence            999999999999999999999999999999998753211 11222222233444 7899999999999999999999999


Q ss_pred             ccEEEecCceee
Q 024145          248 GQNLVVDGGFSV  259 (272)
Q Consensus       248 G~~i~~dgG~~~  259 (272)
                      |+++.+|||..+
T Consensus       241 G~~~~~dgg~~~  252 (253)
T PRK08993        241 GYTIAVDGGWLA  252 (253)
T ss_pred             CcEEEECCCEec
Confidence            999999999764

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-43  Score=299.75  Aligned_cols=247  Identities=32%  Similarity=0.495  Sum_probs=213.4

Q ss_pred             ccCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHH---HhCCceEEEEecCCCHHHHHHHHHHHH
Q 024145            8 APFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLAD---KLGQDVCYIHCDISNEDEVINLVDTAV   84 (272)
Q Consensus         8 ~~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~   84 (272)
                      +++.+++||++|||||++|||++++++|+++|++|++++|+ ...+++.+   +.+.++.++.+|+++.++++++++++.
T Consensus         8 ~~~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~   86 (258)
T PRK06935          8 MDFFSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEAL   86 (258)
T ss_pred             cccccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence            34567899999999999999999999999999999999987 33333333   335678999999999999999999999


Q ss_pred             HHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhh
Q 024145           85 SKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYT  164 (272)
Q Consensus        85 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~  164 (272)
                      +.++++|++|||+|....  .++.+.+.++|++.+++|+.+++.++++++++|.+++.|+||++||..+..+.+.++.|+
T Consensus        87 ~~~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  164 (258)
T PRK06935         87 EEFGKIDILVNNAGTIRR--APLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKFVPAYT  164 (258)
T ss_pred             HHcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCCCchhhH
Confidence            999999999999998654  677888899999999999999999999999999887889999999999988888899999


Q ss_pred             hhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCC
Q 024145          165 ISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESS  244 (272)
Q Consensus       165 ~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  244 (272)
                      ++|+|++++++++++|+.++||+||+|+||+++|++............. .....+. +++.+|+|+++.++||+++.+.
T Consensus       165 asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~dva~~~~~l~s~~~~  242 (258)
T PRK06935        165 ASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRADKNRNDE-ILKRIPA-GRWGEPDDLMGAAVFLASRASD  242 (258)
T ss_pred             HHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccChHHHHH-HHhcCCC-CCCCCHHHHHHHHHHHcChhhc
Confidence            9999999999999999999999999999999999986532111122122 2223344 7899999999999999999999


Q ss_pred             CccccEEEecCceee
Q 024145          245 YVSGQNLVVDGGFSV  259 (272)
Q Consensus       245 ~~~G~~i~~dgG~~~  259 (272)
                      +++|+++.+|||..+
T Consensus       243 ~~~G~~i~~dgg~~~  257 (258)
T PRK06935        243 YVNGHILAVDGGWLV  257 (258)
T ss_pred             CCCCCEEEECCCeec
Confidence            999999999999764

>PLN02253 xanthoxin dehydrogenase

Probab=100.00  E-value=1.8e-43  Score=303.60  Aligned_cols=256  Identities=49%  Similarity=0.817  Sum_probs=216.8

Q ss_pred             cCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhC--CceEEEEecCCCHHHHHHHHHHHHHH
Q 024145            9 PFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLG--QDVCYIHCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (272)
                      +..+++||++|||||++|||++++++|+++|++|++++|+.+..++..++++  .++.++++|++|+++++++++++.++
T Consensus        12 ~~~~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~   91 (280)
T PLN02253         12 PSQRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDK   91 (280)
T ss_pred             cccccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHH
Confidence            4567889999999999999999999999999999999998776666666553  36889999999999999999999999


Q ss_pred             hCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhh
Q 024145           87 FGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTIS  166 (272)
Q Consensus        87 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~s  166 (272)
                      ++++|+||||||.......++.+.+.+++++++++|+.+++.+++++.++|.+++.|+||+++|..+..+.++...|++|
T Consensus        92 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~s  171 (280)
T PLN02253         92 FGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLGPHAYTGS  171 (280)
T ss_pred             hCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCCCCcccHHH
Confidence            99999999999986542245778899999999999999999999999999987778999999999998888888899999


Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChh---H-HH---HHHhhcCCCCCCCCChHhHHHHHHHHh
Q 024145          167 KYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPA---L-IE---SSMSQMGNLKGEFLKTDGIANAALYLA  239 (272)
Q Consensus       167 K~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~---~-~~---~~~~~~~~~~~~~~~~~dva~~~~~l~  239 (272)
                      |+|++.++++++.|++++||+|++++||+++|++.........   . ..   .......++.++..+|+|++++++||+
T Consensus       172 K~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~dva~~~~~l~  251 (280)
T PLN02253        172 KHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANLKGVELTVDDVANAVLFLA  251 (280)
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcCCCCcCCCCCHHHHHHHHHhhc
Confidence            9999999999999999999999999999999997543111111   1 10   111112223356689999999999999


Q ss_pred             cCCCCCccccEEEecCceeeccCcc
Q 024145          240 SDESSYVSGQNLVVDGGFSVVNPTV  264 (272)
Q Consensus       240 s~~~~~~~G~~i~~dgG~~~~~~~~  264 (272)
                      ++.+.+++|+.|.+|||..+..+++
T Consensus       252 s~~~~~i~G~~i~vdgG~~~~~~~~  276 (280)
T PLN02253        252 SDEARYISGLNLMIDGGFTCTNHSL  276 (280)
T ss_pred             CcccccccCcEEEECCchhhccchh
Confidence            9999999999999999998776655

>PRK06172 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-43  Score=298.14  Aligned_cols=247  Identities=34%  Similarity=0.532  Sum_probs=215.8

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      .++++|++|||||++|||++++++|+++|++|++++|+++..++..+++   +.++.++.+|+++.++++.+++++.+.+
T Consensus         3 ~~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   82 (253)
T PRK06172          3 MTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAY   82 (253)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            4578999999999999999999999999999999999987765555443   5578999999999999999999999999


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhH
Q 024145           88 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISK  167 (272)
Q Consensus        88 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK  167 (272)
                      +++|++|||+|..... .++.+.+.+++++.+++|+.+++.++++++|+|.+++.+++|++||..+..+.+++..|++||
T Consensus        83 g~id~li~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK  161 (253)
T PRK06172         83 GRLDYAFNNAGIEIEQ-GRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPKMSIYAASK  161 (253)
T ss_pred             CCCCEEEECCCCCCCC-CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCCchhHHHH
Confidence            9999999999976442 457788999999999999999999999999999877789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCcc
Q 024145          168 YGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVS  247 (272)
Q Consensus       168 ~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  247 (272)
                      +|+++|+++++.|+.++||++++|+||+++|++........+...+.+....+. +++.+|+|+++.++||+++...+++
T Consensus       162 aa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~ia~~~~~l~~~~~~~~~  240 (253)
T PRK06172        162 HAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHPV-GRIGKVEEVASAVLYLCSDGASFTT  240 (253)
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccChHHHHHHhccCCC-CCccCHHHHHHHHHHHhCccccCcC
Confidence            999999999999999999999999999999999764322223333333334444 7889999999999999999999999


Q ss_pred             ccEEEecCceee
Q 024145          248 GQNLVVDGGFSV  259 (272)
Q Consensus       248 G~~i~~dgG~~~  259 (272)
                      |+.|.+|||.+.
T Consensus       241 G~~i~~dgg~~~  252 (253)
T PRK06172        241 GHALMVDGGATA  252 (253)
T ss_pred             CcEEEECCCccC
Confidence            999999999854

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=100.00  E-value=3.4e-43  Score=301.56  Aligned_cols=249  Identities=27%  Similarity=0.392  Sum_probs=213.8

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      .++++|+++||||++|||++++++|+++|++|++++|+.+..+++.+++   +.++.++++|+++.++++++++++.+++
T Consensus         6 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   85 (278)
T PRK08277          6 FSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDF   85 (278)
T ss_pred             eccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4678999999999999999999999999999999999887766665554   4578899999999999999999999999


Q ss_pred             CCccEEEeCCCCCCCC-------------CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccccc
Q 024145           88 GKLDIMYNNAGILDRS-------------FGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTE  154 (272)
Q Consensus        88 g~id~lv~~ag~~~~~-------------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~  154 (272)
                      +++|++|||+|...+.             ..++.+.+.++|++.+++|+.+++.+++.+++.|.+++.|+||++||..+.
T Consensus        86 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~  165 (278)
T PRK08277         86 GPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAF  165 (278)
T ss_pred             CCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhc
Confidence            9999999999965431             134677889999999999999999999999999988778999999999999


Q ss_pred             ccCCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCC----hhHHHHHHhhcCCCCCCCCChHh
Q 024145          155 IAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVD----PALIESSMSQMGNLKGEFLKTDG  230 (272)
Q Consensus       155 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~d  230 (272)
                      .+.+....|++||+|++.++++++.|+.++||++|+|+||+++|++.+.....    .....+......++ +++.+|+|
T Consensus       166 ~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~~~d  244 (278)
T PRK08277        166 TPLTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKILAHTPM-GRFGKPEE  244 (278)
T ss_pred             CCCCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccccchhHHHHHhccCCc-cCCCCHHH
Confidence            99999999999999999999999999999999999999999999976532111    11111222223344 89999999


Q ss_pred             HHHHHHHHhcC-CCCCccccEEEecCceeec
Q 024145          231 IANAALYLASD-ESSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       231 va~~~~~l~s~-~~~~~~G~~i~~dgG~~~~  260 (272)
                      +|++++||+++ ++.+++|++|.+|||++.-
T Consensus       245 va~~~~~l~s~~~~~~~tG~~i~vdgG~~~~  275 (278)
T PRK08277        245 LLGTLLWLADEKASSFVTGVVLPVDGGFSAY  275 (278)
T ss_pred             HHHHHHHHcCccccCCcCCCEEEECCCeecc
Confidence            99999999999 8999999999999997653

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-43  Score=298.25  Aligned_cols=248  Identities=28%  Similarity=0.416  Sum_probs=218.6

Q ss_pred             cCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHH
Q 024145            9 PFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVS   85 (272)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (272)
                      .+.+++||++|||||+++||++++++|+++|++|++++|+++..++..+.+   +.++.++++|++|.++++++++++.+
T Consensus         4 ~~~~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   83 (255)
T PRK07523          4 NLFDLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEA   83 (255)
T ss_pred             cccCCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            445689999999999999999999999999999999999987766665555   34688999999999999999999999


Q ss_pred             HhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhh
Q 024145           86 KFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTI  165 (272)
Q Consensus        86 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~  165 (272)
                      +++++|++|||+|....  .++.+.+.++|++++++|+.+++.+++.+.+.|.+++.|+||++||..+..+.+++..|++
T Consensus        84 ~~~~~d~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~  161 (255)
T PRK07523         84 EIGPIDILVNNAGMQFR--TPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALARPGIAPYTA  161 (255)
T ss_pred             hcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCCCCCccHHH
Confidence            99999999999998755  6788889999999999999999999999999998877899999999998888899999999


Q ss_pred             hHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCC
Q 024145          166 SKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSY  245 (272)
Q Consensus       166 sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  245 (272)
                      +|++++.++++++.|++++||+|++|+||+++|++....... +...+.+....++ +++.+|+|+|++++||+++++.+
T Consensus       162 sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~~~~~~~  239 (255)
T PRK07523        162 TKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVAD-PEFSAWLEKRTPA-GRWGKVEELVGACVFLASDASSF  239 (255)
T ss_pred             HHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccC-HHHHHHHHhcCCC-CCCcCHHHHHHHHHHHcCchhcC
Confidence            999999999999999999999999999999999986532222 2233344444444 78999999999999999999999


Q ss_pred             ccccEEEecCceeec
Q 024145          246 VSGQNLVVDGGFSVV  260 (272)
Q Consensus       246 ~~G~~i~~dgG~~~~  260 (272)
                      ++|+.|.+|||..++
T Consensus       240 ~~G~~i~~~gg~~~~  254 (255)
T PRK07523        240 VNGHVLYVDGGITAS  254 (255)
T ss_pred             ccCcEEEECCCeecc
Confidence            999999999998764

>PRK06841 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.4e-43  Score=297.02  Aligned_cols=247  Identities=37%  Similarity=0.545  Sum_probs=213.2

Q ss_pred             cCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145            9 PFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      .++++++|++|||||+++||++++++|+++|++|++++|+....+...+..+..+.++.+|++++++++++++++.++++
T Consensus         9 ~~~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   88 (255)
T PRK06841          9 LAFDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFG   88 (255)
T ss_pred             hhcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            34678999999999999999999999999999999999987643322222245677999999999999999999999999


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHH
Q 024145           89 KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKY  168 (272)
Q Consensus        89 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~  168 (272)
                      ++|++|||+|....  .++.+.+.+++++.+++|+.+++.+++.+.++|.+++.++||++||..+..+.+.+..|+++|+
T Consensus        89 ~~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  166 (255)
T PRK06841         89 RIDILVNSAGVALL--APAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALERHVAYCASKA  166 (255)
T ss_pred             CCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCCCCchHHHHHH
Confidence            99999999998754  5677888999999999999999999999999998877899999999999889999999999999


Q ss_pred             HHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccc
Q 024145          169 GILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSG  248 (272)
Q Consensus       169 a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  248 (272)
                      ++++++++++.|++++||++++|+||+++|++..... ..+... ......+. +++.+|+|+++.+++|+++++.+++|
T Consensus       167 a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~-~~~~~~-~~~~~~~~-~~~~~~~~va~~~~~l~~~~~~~~~G  243 (255)
T PRK06841        167 GVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAW-AGEKGE-RAKKLIPA-GRFAYPEEIAAAALFLASDAAAMITG  243 (255)
T ss_pred             HHHHHHHHHHHHHHhhCeEEEEEEeCcCcCccccccc-chhHHH-HHHhcCCC-CCCcCHHHHHHHHHHHcCccccCccC
Confidence            9999999999999999999999999999999865322 111212 22223344 78999999999999999999999999


Q ss_pred             cEEEecCceeec
Q 024145          249 QNLVVDGGFSVV  260 (272)
Q Consensus       249 ~~i~~dgG~~~~  260 (272)
                      +.+.+|||+.++
T Consensus       244 ~~i~~dgg~~~~  255 (255)
T PRK06841        244 ENLVIDGGYTIQ  255 (255)
T ss_pred             CEEEECCCccCC
Confidence            999999998753

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=100.00  E-value=5.8e-43  Score=295.10  Aligned_cols=244  Identities=34%  Similarity=0.480  Sum_probs=209.3

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcc-hHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDK-LGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      +++||++|||||++|||++++++|+++|++|++++|+.. ...+..++.+.++.++.+|++++++++++++++.+.++++
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   81 (248)
T TIGR01832         2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHI   81 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            578999999999999999999999999999999998653 2223333445678999999999999999999999999999


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCC-CceEEEEecccccccCCCCchhhhhHHH
Q 024145           91 DIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ-KGCILFTASACTEIAGLGSPAYTISKYG  169 (272)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~Y~~sK~a  169 (272)
                      |++|||+|....  .++.+.+.++|++++++|+.+++.++++++++|.+++ .|+||++||..+..+.+....|++||++
T Consensus        82 d~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa  159 (248)
T TIGR01832        82 DILVNNAGIIRR--ADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRVPSYTASKHG  159 (248)
T ss_pred             CEEEECCCCCCC--CChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCCCchhHHHHHH
Confidence            999999998765  5677888999999999999999999999999997655 7899999999888888888999999999


Q ss_pred             HHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCcccc
Q 024145          170 ILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQ  249 (272)
Q Consensus       170 ~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  249 (272)
                      +++++++++.|+.++||++|+|+||+++|++...... ............+. +++.+|+|+|++++||+++.+.+++|+
T Consensus       160 ~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~s~~~~~~~G~  237 (248)
T TIGR01832       160 VAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRA-DEDRNAAILERIPA-GRWGTPDDIGGPAVFLASSASDYVNGY  237 (248)
T ss_pred             HHHHHHHHHHHhCccCcEEEEEEECcCcCcchhcccc-ChHHHHHHHhcCCC-CCCcCHHHHHHHHHHHcCccccCcCCc
Confidence            9999999999999999999999999999998653211 11222222223344 789999999999999999989999999


Q ss_pred             EEEecCceee
Q 024145          250 NLVVDGGFSV  259 (272)
Q Consensus       250 ~i~~dgG~~~  259 (272)
                      ++.+|||+.+
T Consensus       238 ~i~~dgg~~~  247 (248)
T TIGR01832       238 TLAVDGGWLA  247 (248)
T ss_pred             EEEeCCCEec
Confidence            9999999764

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK07985 oxidoreductase; Provisional

Probab=100.00  E-value=6.1e-43  Score=302.34  Aligned_cols=244  Identities=28%  Similarity=0.348  Sum_probs=206.9

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcc--hHHHHHH---HhCCceEEEEecCCCHHHHHHHHHHHHH
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDK--LGEDLAD---KLGQDVCYIHCDISNEDEVINLVDTAVS   85 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~--~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (272)
                      .++++|++|||||++|||++++++|+++|++|++++|+..  ..+++.+   +.+.++.++.+|+++.++++++++++.+
T Consensus        45 ~~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~  124 (294)
T PRK07985         45 GRLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHK  124 (294)
T ss_pred             CccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            3588999999999999999999999999999999876532  3333332   3355788999999999999999999999


Q ss_pred             HhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhh
Q 024145           86 KFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTI  165 (272)
Q Consensus        86 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~  165 (272)
                      .++++|++|||||.... ..++.+.+.++|++++++|+.+++.+++++.|+|.+  .|+||++||..+..+.+....|++
T Consensus       125 ~~g~id~lv~~Ag~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~g~iv~iSS~~~~~~~~~~~~Y~a  201 (294)
T PRK07985        125 ALGGLDIMALVAGKQVA-IPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPK--GASIITTSSIQAYQPSPHLLDYAA  201 (294)
T ss_pred             HhCCCCEEEECCCCCcC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhc--CCEEEEECCchhccCCCCcchhHH
Confidence            99999999999997532 256788899999999999999999999999999854  489999999999888889999999


Q ss_pred             hHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCC
Q 024145          166 SKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSY  245 (272)
Q Consensus       166 sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  245 (272)
                      ||+|+++++++++.|++++||++|+|+||+++|++...... .++....+....++ +++.+|+|+|++++||+++++.+
T Consensus       202 sKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~-~r~~~pedva~~~~fL~s~~~~~  279 (294)
T PRK07985        202 TKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQ-TQDKIPQFGQQTPM-KRAGQPAELAPVYVYLASQESSY  279 (294)
T ss_pred             HHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCC-CHHHHHHHhccCCC-CCCCCHHHHHHHHHhhhChhcCC
Confidence            99999999999999999999999999999999998542111 22222222333344 78899999999999999999999


Q ss_pred             ccccEEEecCceee
Q 024145          246 VSGQNLVVDGGFSV  259 (272)
Q Consensus       246 ~~G~~i~~dgG~~~  259 (272)
                      ++|++|.+|||.++
T Consensus       280 itG~~i~vdgG~~~  293 (294)
T PRK07985        280 VTAEVHGVCGGEHL  293 (294)
T ss_pred             ccccEEeeCCCeeC
Confidence            99999999999864

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=100.00  E-value=2.5e-44  Score=302.47  Aligned_cols=231  Identities=37%  Similarity=0.560  Sum_probs=203.3

Q ss_pred             CCC--ChHHHHHHHHHHHcCCeEEEeecCcchH----HHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHh-CCccEEE
Q 024145           22 GGA--SGIGAMAVELFHENGAKVVIADVQDKLG----EDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKF-GKLDIMY   94 (272)
Q Consensus        22 Gas--~giG~aia~~la~~G~~V~~~~r~~~~~----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~id~lv   94 (272)
                      |++  +|||++++++|+++|++|++++|+.+..    +++.++.+.+  ++.+|++++++++++++++.+.+ |++|+||
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~--~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV   78 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAE--VIQCDLSDEESVEALFDEAVERFGGRIDILV   78 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSE--EEESCTTSHHHHHHHHHHHHHHHCSSESEEE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCc--eEeecCcchHHHHHHHHHHHhhcCCCeEEEE
Confidence            566  9999999999999999999999999874    3444444544  69999999999999999999999 9999999


Q ss_pred             eCCCCCCC--CCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHHHH
Q 024145           95 NNAGILDR--SFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILG  172 (272)
Q Consensus        95 ~~ag~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~  172 (272)
                      ||+|...+  ...++.+.+.++|++.+++|+.+++.+++++.|+|.+  .|+||++||..+..+.+++..|+++|+|+++
T Consensus        79 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~gsii~iss~~~~~~~~~~~~y~~sKaal~~  156 (241)
T PF13561_consen   79 NNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKK--GGSIINISSIAAQRPMPGYSAYSASKAALEG  156 (241)
T ss_dssp             EEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHH--EEEEEEEEEGGGTSBSTTTHHHHHHHHHHHH
T ss_pred             ecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh--CCCcccccchhhcccCccchhhHHHHHHHHH
Confidence            99998764  2367788899999999999999999999999998865  4999999999999999999999999999999


Q ss_pred             HHHHHHHHhcC-CCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccccEE
Q 024145          173 LVKCLAAELGQ-YGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNL  251 (272)
Q Consensus       173 ~~~~la~e~~~-~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i  251 (272)
                      |+|++|.|+++ +|||||+|+||+++|++.... ...++..+......|+ +++.+|+|+|++++||+|+.+++||||+|
T Consensus       157 l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~-~~~~~~~~~~~~~~pl-~r~~~~~evA~~v~fL~s~~a~~itG~~i  234 (241)
T PF13561_consen  157 LTRSLAKELAPKKGIRVNAVSPGPIETPMTERI-PGNEEFLEELKKRIPL-GRLGTPEEVANAVLFLASDAASYITGQVI  234 (241)
T ss_dssp             HHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHH-HTHHHHHHHHHHHSTT-SSHBEHHHHHHHHHHHHSGGGTTGTSEEE
T ss_pred             HHHHHHHHhccccCeeeeeecccceeccchhcc-ccccchhhhhhhhhcc-CCCcCHHHHHHHHHHHhCccccCccCCeE
Confidence            99999999999 999999999999999986521 1234455555566666 88899999999999999999999999999


Q ss_pred             EecCcee
Q 024145          252 VVDGGFS  258 (272)
Q Consensus       252 ~~dgG~~  258 (272)
                      .+|||++
T Consensus       235 ~vDGG~s  241 (241)
T PF13561_consen  235 PVDGGFS  241 (241)
T ss_dssp             EESTTGG
T ss_pred             EECCCcC
Confidence            9999974

...

>PRK07035 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-42  Score=293.97  Aligned_cols=246  Identities=31%  Similarity=0.441  Sum_probs=214.2

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (272)
                      .+++++|++|||||++|||++++++|+++|++|++++|+.+..+.+.+++   +.++.++++|+++.++++++++++.+.
T Consensus         3 ~~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (252)
T PRK07035          3 LFDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRER   82 (252)
T ss_pred             ccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999887776666554   456888999999999999999999999


Q ss_pred             hCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhh
Q 024145           87 FGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTIS  166 (272)
Q Consensus        87 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~s  166 (272)
                      ++++|++|||+|.... ..++.+.+.+++++.+++|+.+++.+++++++++.+++.++|+++||..+..+.+++..|++|
T Consensus        83 ~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  161 (252)
T PRK07035         83 HGRLDILVNNAAANPY-FGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGDFQGIYSIT  161 (252)
T ss_pred             cCCCCEEEECCCcCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCCCCCCcchHHH
Confidence            9999999999996532 256678889999999999999999999999999988778999999999998888999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCc
Q 024145          167 KYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYV  246 (272)
Q Consensus       167 K~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  246 (272)
                      |+++++++++++.|+.++||++++|+||+++|++.......... .+......+. +++.+|+|+++.++||+++...++
T Consensus       162 K~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~va~~~~~l~~~~~~~~  239 (252)
T PRK07035        162 KAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKNDAI-LKQALAHIPL-RRHAEPSEMAGAVLYLASDASSYT  239 (252)
T ss_pred             HHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCCHHH-HHHHHccCCC-CCcCCHHHHHHHHHHHhCccccCc
Confidence            99999999999999999999999999999999987643222222 2222233333 788999999999999999999999


Q ss_pred             cccEEEecCcee
Q 024145          247 SGQNLVVDGGFS  258 (272)
Q Consensus       247 ~G~~i~~dgG~~  258 (272)
                      +|+++.+|||++
T Consensus       240 ~g~~~~~dgg~~  251 (252)
T PRK07035        240 TGECLNVDGGYL  251 (252)
T ss_pred             cCCEEEeCCCcC
Confidence            999999999964

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=100.00  E-value=3.1e-43  Score=299.36  Aligned_cols=245  Identities=31%  Similarity=0.506  Sum_probs=206.0

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   91 (272)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+..+++.+..+.++.++.+|+++.++++++++++.++++++|
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   81 (262)
T TIGR03325         2 RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKID   81 (262)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCC
Confidence            46899999999999999999999999999999999988877776665566788999999999999999999999999999


Q ss_pred             EEEeCCCCCCCCCCCCCCCCH----HHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhH
Q 024145           92 IMYNNAGILDRSFGSILDTPK----SDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISK  167 (272)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK  167 (272)
                      ++|||||..... .++.+.+.    ++|++.+++|+.+++.++++++|+|.++ .|++|+++|..+..+.++...|++||
T Consensus        82 ~li~~Ag~~~~~-~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~Y~~sK  159 (262)
T TIGR03325        82 CLIPNAGIWDYS-TALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVAS-RGSVIFTISNAGFYPNGGGPLYTAAK  159 (262)
T ss_pred             EEEECCCCCccC-CccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhc-CCCEEEEeccceecCCCCCchhHHHH
Confidence            999999975321 23333333    5799999999999999999999999764 48899999999888888889999999


Q ss_pred             HHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCC--Ch-----hHHHHHHhhcCCCCCCCCChHhHHHHHHHHhc
Q 024145          168 YGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGV--DP-----ALIESSMSQMGNLKGEFLKTDGIANAALYLAS  240 (272)
Q Consensus       168 ~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~--~~-----~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  240 (272)
                      +|+++|+++++.|++++ |+||+|+||+++|++......  ..     ....+......++ +++.+|+|++++++||++
T Consensus       160 aa~~~l~~~la~e~~~~-irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~p~eva~~~~~l~s  237 (262)
T TIGR03325       160 HAVVGLVKELAFELAPY-VRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLPI-GRMPDAEEYTGAYVFFAT  237 (262)
T ss_pred             HHHHHHHHHHHHhhccC-eEEEEEecCCCcCCCccccccccccccccccchhhhhhhcCCC-CCCCChHHhhhheeeeec
Confidence            99999999999999987 999999999999998653110  00     0122333333444 899999999999999998


Q ss_pred             C-CCCCccccEEEecCceeec
Q 024145          241 D-ESSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       241 ~-~~~~~~G~~i~~dgG~~~~  260 (272)
                      + .+.+++|++|.+|||..+.
T Consensus       238 ~~~~~~~tG~~i~vdgg~~~~  258 (262)
T TIGR03325       238 RGDTVPATGAVLNYDGGMGVR  258 (262)
T ss_pred             CCCcccccceEEEecCCeeec
Confidence            7 4678999999999998765

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK12747 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-42  Score=293.81  Aligned_cols=240  Identities=28%  Similarity=0.376  Sum_probs=202.3

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEee-cCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHH--
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGAKVVIAD-VQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSK--   86 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~~V~~~~-r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~--   86 (272)
                      +++|++|||||++|||++++++|+++|++|+++. |+.+..++..+++   +..+..+.+|+++.++++.+++++.+.  
T Consensus         2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (252)
T PRK12747          2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ   81 (252)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhh
Confidence            4689999999999999999999999999998875 5555555444443   456788999999999999999888763  


Q ss_pred             --hC--CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCch
Q 024145           87 --FG--KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPA  162 (272)
Q Consensus        87 --~g--~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  162 (272)
                        ++  ++|+||||||+...  .++.+.+.++|++++++|+.+++.++++++|.|.+  .|+||++||..+..+.++...
T Consensus        82 ~~~g~~~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~  157 (252)
T PRK12747         82 NRTGSTKFDILINNAGIGPG--AFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD--NSRIINISSAATRISLPDFIA  157 (252)
T ss_pred             hhcCCCCCCEEEECCCcCCC--CCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhc--CCeEEEECCcccccCCCCchh
Confidence              34  79999999997643  56788899999999999999999999999999965  489999999999999899999


Q ss_pred             hhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCC
Q 024145          163 YTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDE  242 (272)
Q Consensus       163 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  242 (272)
                      |++||+|+++++++++.|++++||++|+|+||+++|++...... .+..........+. +++.+|+|+++++.||+++.
T Consensus       158 Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~s~~  235 (252)
T PRK12747        158 YSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLS-DPMMKQYATTISAF-NRLGEVEDIADTAAFLASPD  235 (252)
T ss_pred             HHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhccc-CHHHHHHHHhcCcc-cCCCCHHHHHHHHHHHcCcc
Confidence            99999999999999999999999999999999999998753211 12222222222233 78899999999999999998


Q ss_pred             CCCccccEEEecCcee
Q 024145          243 SSYVSGQNLVVDGGFS  258 (272)
Q Consensus       243 ~~~~~G~~i~~dgG~~  258 (272)
                      ..+++|+.+.+|||..
T Consensus       236 ~~~~~G~~i~vdgg~~  251 (252)
T PRK12747        236 SRWVTGQLIDVSGGSC  251 (252)
T ss_pred             ccCcCCcEEEecCCcc
Confidence            9999999999999975

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.1e-42  Score=293.33  Aligned_cols=239  Identities=26%  Similarity=0.359  Sum_probs=205.7

Q ss_pred             CCCCCCcEEEEeCCC--ChHHHHHHHHHHHcCCeEEEeecC-----------cchHHHHHHH---hCCceEEEEecCCCH
Q 024145           10 FKRLEGKVAIITGGA--SGIGAMAVELFHENGAKVVIADVQ-----------DKLGEDLADK---LGQDVCYIHCDISNE   73 (272)
Q Consensus        10 ~~~l~~k~vlItGas--~giG~aia~~la~~G~~V~~~~r~-----------~~~~~~~~~~---~~~~~~~~~~D~~~~   73 (272)
                      |.+++||++|||||+  +|||++++++|+++|++|++++|.           .+...+..++   .+.++.++++|+++.
T Consensus         1 ~~~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~   80 (256)
T PRK12859          1 MNQLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQN   80 (256)
T ss_pred             CCCcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCH
Confidence            346899999999999  499999999999999999987542           1112222222   356788999999999


Q ss_pred             HHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccc
Q 024145           74 DEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACT  153 (272)
Q Consensus        74 ~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~  153 (272)
                      ++++++++++.+.++++|++|||+|....  .++.+.+.++|++.+++|+.+++.+.+++++.|.+++.|+||++||..+
T Consensus        81 ~~i~~~~~~~~~~~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~  158 (256)
T PRK12859         81 DAPKELLNKVTEQLGYPHILVNNAAYSTN--NDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQF  158 (256)
T ss_pred             HHHHHHHHHHHHHcCCCcEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEccccc
Confidence            99999999999999999999999998654  6788999999999999999999999999999998777899999999999


Q ss_pred             cccCCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHH
Q 024145          154 EIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIAN  233 (272)
Q Consensus       154 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  233 (272)
                      ..+.+++..|++||++++.|+++++.|+.++||++++|+||+++|++..      +...+.+....+. +++.+|+|+++
T Consensus       159 ~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~------~~~~~~~~~~~~~-~~~~~~~d~a~  231 (256)
T PRK12859        159 QGPMVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMT------EEIKQGLLPMFPF-GRIGEPKDAAR  231 (256)
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCC------HHHHHHHHhcCCC-CCCcCHHHHHH
Confidence            9888999999999999999999999999999999999999999998743      1222222233333 77889999999


Q ss_pred             HHHHHhcCCCCCccccEEEecCce
Q 024145          234 AALYLASDESSYVSGQNLVVDGGF  257 (272)
Q Consensus       234 ~~~~l~s~~~~~~~G~~i~~dgG~  257 (272)
                      .++||+++.+.+++|++|.+|||+
T Consensus       232 ~~~~l~s~~~~~~~G~~i~~dgg~  255 (256)
T PRK12859        232 LIKFLASEEAEWITGQIIHSEGGF  255 (256)
T ss_pred             HHHHHhCccccCccCcEEEeCCCc
Confidence            999999999999999999999995

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=100.00  E-value=2.8e-42  Score=292.52  Aligned_cols=246  Identities=33%  Similarity=0.461  Sum_probs=214.3

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      +.+.+|++|||||++|||++++++|+++|++|++++|+.+..++..++++.++.++.+|++|+++++++++++.++++++
T Consensus         2 ~~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (257)
T PRK07067          2 MRLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGI   81 (257)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            45789999999999999999999999999999999999888877777777778999999999999999999999999999


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCC-CceEEEEecccccccCCCCchhhhhHHH
Q 024145           91 DIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ-KGCILFTASACTEIAGLGSPAYTISKYG  169 (272)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~Y~~sK~a  169 (272)
                      |++|||+|....  .++.+.+.+++++.+++|+.+++.+++++.++|.++. .++||++||..+..+.+++..|++||++
T Consensus        82 d~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  159 (257)
T PRK07067         82 DILFNNAALFDM--APILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEALVSHYCATKAA  159 (257)
T ss_pred             CEEEECCCcCCC--CCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCCCCchhhhhHHH
Confidence            999999998654  6778889999999999999999999999999987653 5899999999888888999999999999


Q ss_pred             HHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCC--------CChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcC
Q 024145          170 ILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGG--------VDPALIESSMSQMGNLKGEFLKTDGIANAALYLASD  241 (272)
Q Consensus       170 ~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  241 (272)
                      ++.++++++.|+.++||++++|+||+++|++.....        ..+.+.........++ +++.+|+|+|+++.||+++
T Consensus       160 ~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~s~  238 (257)
T PRK07067        160 VISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAVPL-GRMGVPDDLTGMALFLASA  238 (257)
T ss_pred             HHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHhhcCCC-CCccCHHHHHHHHHHHhCc
Confidence            999999999999999999999999999999864311        0011111222222333 7899999999999999999


Q ss_pred             CCCCccccEEEecCceee
Q 024145          242 ESSYVSGQNLVVDGGFSV  259 (272)
Q Consensus       242 ~~~~~~G~~i~~dgG~~~  259 (272)
                      ...+++|++|++|||..+
T Consensus       239 ~~~~~~g~~~~v~gg~~~  256 (257)
T PRK07067        239 DADYIVAQTYNVDGGNWM  256 (257)
T ss_pred             ccccccCcEEeecCCEeC
Confidence            999999999999999754

>PRK06128 oxidoreductase; Provisional

Probab=100.00  E-value=3.9e-42  Score=298.18  Aligned_cols=245  Identities=28%  Similarity=0.365  Sum_probs=208.0

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcc--hHHHHHHH---hCCceEEEEecCCCHHHHHHHHHHHH
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDK--LGEDLADK---LGQDVCYIHCDISNEDEVINLVDTAV   84 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~--~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~   84 (272)
                      +..++||++|||||++|||++++++|+++|++|++++++.+  ..++..+.   .+.++.++.+|+++.++++++++++.
T Consensus        50 ~~~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  129 (300)
T PRK06128         50 FGRLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAV  129 (300)
T ss_pred             ccccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999887543  22333333   35678899999999999999999999


Q ss_pred             HHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhh
Q 024145           85 SKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYT  164 (272)
Q Consensus        85 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~  164 (272)
                      +.++++|+||||||..... .++.+.+.++|++.+++|+.+++.++++++++|.+  .++||++||..+..+.+++..|+
T Consensus       130 ~~~g~iD~lV~nAg~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~Y~  206 (300)
T PRK06128        130 KELGGLDILVNIAGKQTAV-KDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPP--GASIINTGSIQSYQPSPTLLDYA  206 (300)
T ss_pred             HHhCCCCEEEECCcccCCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCc--CCEEEEECCccccCCCCCchhHH
Confidence            9999999999999976432 56788899999999999999999999999999864  47999999999998888999999


Q ss_pred             hhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCC
Q 024145          165 ISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESS  244 (272)
Q Consensus       165 ~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  244 (272)
                      +||+|+++|+++++.|+.++||+||+|+||+++|++....... ++....+....+. +++.+|+|++.+++||+++.+.
T Consensus       207 asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~~-~~~~~~~~~~~p~-~r~~~p~dva~~~~~l~s~~~~  284 (300)
T PRK06128        207 STKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQP-PEKIPDFGSETPM-KRPGQPVEMAPLYVLLASQESS  284 (300)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCCC-HHHHHHHhcCCCC-CCCcCHHHHHHHHHHHhCcccc
Confidence            9999999999999999999999999999999999986432112 2222222223343 7899999999999999999999


Q ss_pred             CccccEEEecCceee
Q 024145          245 YVSGQNLVVDGGFSV  259 (272)
Q Consensus       245 ~~~G~~i~~dgG~~~  259 (272)
                      +++|+.|.+|||..+
T Consensus       285 ~~~G~~~~v~gg~~~  299 (300)
T PRK06128        285 YVTGEVFGVTGGLLL  299 (300)
T ss_pred             CccCcEEeeCCCEeC
Confidence            999999999999865

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.2e-42  Score=291.97  Aligned_cols=246  Identities=33%  Similarity=0.481  Sum_probs=206.5

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   91 (272)
                      ++++|+++||||++|||++++++|+++|++|+++.++.+...+..+.  .++.++.+|++|+++++++++++.++++++|
T Consensus         4 ~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   81 (255)
T PRK06463          4 RFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELRE--KGVFTIKCDVGNRDQVKKSKEVVEKEFGRVD   81 (255)
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHh--CCCeEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            46899999999999999999999999999998887654432222222  2578899999999999999999999999999


Q ss_pred             EEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccc-cCCCCchhhhhHHHH
Q 024145           92 IMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEI-AGLGSPAYTISKYGI  170 (272)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~-~~~~~~~Y~~sK~a~  170 (272)
                      ++|||+|....  .++.+.+.++|++++++|+.+++.+++.++|.|.+++.|+||++||..+.. +.++...|++||+|+
T Consensus        82 ~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~  159 (255)
T PRK06463         82 VLVNNAGIMYL--MPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAAEGTTFYAITKAGI  159 (255)
T ss_pred             EEEECCCcCCC--CChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCCCCccHhHHHHHHH
Confidence            99999998654  567788999999999999999999999999999877789999999988764 456778899999999


Q ss_pred             HHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCCh--hHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccc
Q 024145          171 LGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDP--ALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSG  248 (272)
Q Consensus       171 ~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  248 (272)
                      ++|+++++.|+.++||+||+|+||+++|++........  ......+....+. +++.+|+|+++.+++|+++.+.+++|
T Consensus       160 ~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~va~~~~~l~s~~~~~~~G  238 (255)
T PRK06463        160 IILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTVL-KTTGKPEDIANIVLFLASDDARYITG  238 (255)
T ss_pred             HHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCCCc-CCCcCHHHHHHHHHHHcChhhcCCCC
Confidence            99999999999999999999999999999875321111  1222223333333 78899999999999999999999999


Q ss_pred             cEEEecCceeeccC
Q 024145          249 QNLVVDGGFSVVNP  262 (272)
Q Consensus       249 ~~i~~dgG~~~~~~  262 (272)
                      +.+.+|||..-...
T Consensus       239 ~~~~~dgg~~~~~~  252 (255)
T PRK06463        239 QVIVADGGRIDNLT  252 (255)
T ss_pred             CEEEECCCeeeccc
Confidence            99999999876543

>PRK08643 acetoin reductase; Validated

Probab=100.00  E-value=3.9e-42  Score=291.45  Aligned_cols=243  Identities=28%  Similarity=0.452  Sum_probs=209.7

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   91 (272)
                      +|++|||||++|||++++++|+++|++|++++|+.+..++..+++   +.++.++++|++++++++++++++.++++++|
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   81 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN   81 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            689999999999999999999999999999999887766665544   45788999999999999999999999999999


Q ss_pred             EEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCC-CceEEEEecccccccCCCCchhhhhHHHH
Q 024145           92 IMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ-KGCILFTASACTEIAGLGSPAYTISKYGI  170 (272)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~Y~~sK~a~  170 (272)
                      ++|||+|....  .++.+.+.+++++++++|+.+++.+++.+++.|.+.+ .++||++||..+..+.++...|+++|+++
T Consensus        82 ~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  159 (256)
T PRK08643         82 VVVNNAGVAPT--TPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPELAVYSSTKFAV  159 (256)
T ss_pred             EEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCCCCchhHHHHHHH
Confidence            99999998654  5678889999999999999999999999999997654 58999999999988888999999999999


Q ss_pred             HHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCC-------ChhH-HHHHHhhcCCCCCCCCChHhHHHHHHHHhcCC
Q 024145          171 LGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGV-------DPAL-IESSMSQMGNLKGEFLKTDGIANAALYLASDE  242 (272)
Q Consensus       171 ~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~-------~~~~-~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  242 (272)
                      +.+++.++.|+.++||++++|+||+++|++......       .++. ....+....+. +++.+|||+++.++||+++.
T Consensus       160 ~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~va~~~~~L~~~~  238 (256)
T PRK08643        160 RGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDITL-GRLSEPEDVANCVSFLAGPD  238 (256)
T ss_pred             HHHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhccCCC-CCCcCHHHHHHHHHHHhCcc
Confidence            999999999999999999999999999998653110       0111 11122222333 78899999999999999999


Q ss_pred             CCCccccEEEecCceeec
Q 024145          243 SSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       243 ~~~~~G~~i~~dgG~~~~  260 (272)
                      +.++||++|.+|||..++
T Consensus       239 ~~~~~G~~i~vdgg~~~~  256 (256)
T PRK08643        239 SDYITGQTIIVDGGMVFH  256 (256)
T ss_pred             ccCccCcEEEeCCCeecC
Confidence            999999999999998763

>PRK07831 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.9e-42  Score=291.90  Aligned_cols=242  Identities=32%  Similarity=0.500  Sum_probs=210.5

Q ss_pred             CCCCCcEEEEeCCCC-hHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh----C-CceEEEEecCCCHHHHHHHHHHHH
Q 024145           11 KRLEGKVAIITGGAS-GIGAMAVELFHENGAKVVIADVQDKLGEDLADKL----G-QDVCYIHCDISNEDEVINLVDTAV   84 (272)
Q Consensus        11 ~~l~~k~vlItGas~-giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----~-~~~~~~~~D~~~~~~~~~~~~~~~   84 (272)
                      ..+++|++|||||+| |||++++++|+++|++|++++|+.+..++..+++    + .++.++++|++++++++++++++.
T Consensus        13 ~~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   92 (262)
T PRK07831         13 GLLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAV   92 (262)
T ss_pred             cccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence            346789999999985 9999999999999999999999887666555443    3 368899999999999999999999


Q ss_pred             HHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCC-CceEEEEecccccccCCCCchh
Q 024145           85 SKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ-KGCILFTASACTEIAGLGSPAY  163 (272)
Q Consensus        85 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~Y  163 (272)
                      +.++++|++|||+|....  ..+.+.+.++|++.+++|+.+++.+++.++|+|.++. .|+||+++|..+..+.+++..|
T Consensus        93 ~~~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y  170 (262)
T PRK07831         93 ERLGRLDVLVNNAGLGGQ--TPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQHGQAHY  170 (262)
T ss_pred             HHcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCCcch
Confidence            999999999999997654  6788889999999999999999999999999998765 7999999999988888899999


Q ss_pred             hhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCC
Q 024145          164 TISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDES  243 (272)
Q Consensus       164 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  243 (272)
                      +++|+|+++++++++.|++++||+||+|+||+++|++....  ..++..+.+....++ +++.+|+|+++.++||+++.+
T Consensus       171 ~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~--~~~~~~~~~~~~~~~-~r~~~p~~va~~~~~l~s~~~  247 (262)
T PRK07831        171 AAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKV--TSAELLDELAAREAF-GRAAEPWEVANVIAFLASDYS  247 (262)
T ss_pred             HHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccc--cCHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHcCchh
Confidence            99999999999999999999999999999999999986532  122222223333344 789999999999999999999


Q ss_pred             CCccccEEEecCce
Q 024145          244 SYVSGQNLVVDGGF  257 (272)
Q Consensus       244 ~~~~G~~i~~dgG~  257 (272)
                      .+++|+++.+|+++
T Consensus       248 ~~itG~~i~v~~~~  261 (262)
T PRK07831        248 SYLTGEVVSVSSQH  261 (262)
T ss_pred             cCcCCceEEeCCCC
Confidence            99999999999975

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=2.7e-42  Score=320.43  Aligned_cols=245  Identities=33%  Similarity=0.462  Sum_probs=214.9

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   91 (272)
                      .+.||++|||||++|||++++++|+++|++|++++|+++..+++.++++.++..+.+|++|+++++++++++.+++|++|
T Consensus       266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  345 (520)
T PRK06484        266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLD  345 (520)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            35889999999999999999999999999999999998888888777777888899999999999999999999999999


Q ss_pred             EEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHHH
Q 024145           92 IMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGIL  171 (272)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~  171 (272)
                      +||||||.... ..++.+.+.++|++++++|+.+++.++++++|+|  ++.|+||++||..+..+.+++..|++||++++
T Consensus       346 ~li~nAg~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~--~~~g~iv~isS~~~~~~~~~~~~Y~asKaal~  422 (520)
T PRK06484        346 VLVNNAGIAEV-FKPSLEQSAEDFTRVYDVNLSGAFACARAAARLM--SQGGVIVNLGSIASLLALPPRNAYCASKAAVT  422 (520)
T ss_pred             EEEECCCCcCC-CCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHh--ccCCEEEEECchhhcCCCCCCchhHHHHHHHH
Confidence            99999997643 2567788999999999999999999999999999  35689999999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccccEE
Q 024145          172 GLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNL  251 (272)
Q Consensus       172 ~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i  251 (272)
                      +|+++++.|+.++||+||+|+||+++|++............+.+....++ +++.+|+|+|++++||+++.+.+++|++|
T Consensus       423 ~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dia~~~~~l~s~~~~~~~G~~i  501 (520)
T PRK06484        423 MLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIPL-GRLGDPEEVAEAIAFLASPAASYVNGATL  501 (520)
T ss_pred             HHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccccHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCccccCccCcEE
Confidence            99999999999999999999999999998753221111112222333344 78899999999999999998999999999


Q ss_pred             EecCceeec
Q 024145          252 VVDGGFSVV  260 (272)
Q Consensus       252 ~~dgG~~~~  260 (272)
                      .+|||+...
T Consensus       502 ~vdgg~~~~  510 (520)
T PRK06484        502 TVDGGWTAF  510 (520)
T ss_pred             EECCCccCC
Confidence            999997553

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=8e-42  Score=291.15  Aligned_cols=248  Identities=28%  Similarity=0.429  Sum_probs=216.3

Q ss_pred             cCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHH
Q 024145            9 PFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVS   85 (272)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (272)
                      ..+++.+|++|||||++|||++++++|+++|++|++++|+++..++..+.+   +.++.++++|+++.++++++++++.+
T Consensus         4 ~~~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   83 (265)
T PRK07097          4 NLFSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEK   83 (265)
T ss_pred             cccCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            456789999999999999999999999999999999999887766665554   45789999999999999999999999


Q ss_pred             HhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhh
Q 024145           86 KFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTI  165 (272)
Q Consensus        86 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~  165 (272)
                      +++++|++|||+|....  .++.+.+.+++++++++|+.+++.+++.++++|.+++.++||++||..+..+.+.+..|++
T Consensus        84 ~~~~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  161 (265)
T PRK07097         84 EVGVIDILVNNAGIIKR--IPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAA  161 (265)
T ss_pred             hCCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCCCCCccHHH
Confidence            99999999999998765  6778899999999999999999999999999998878899999999988888889999999


Q ss_pred             hHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCC-----ChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhc
Q 024145          166 SKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGV-----DPALIESSMSQMGNLKGEFLKTDGIANAALYLAS  240 (272)
Q Consensus       166 sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  240 (272)
                      +|++++.++++++.|+.++||+|++|+||+++|++......     ......+......+. +++.+|+|+++.++++++
T Consensus       162 sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~~  240 (265)
T PRK07097        162 AKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTPA-ARWGDPEDLAGPAVFLAS  240 (265)
T ss_pred             HHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcCCc-cCCcCHHHHHHHHHHHhC
Confidence            99999999999999999999999999999999998653211     111122222333333 788999999999999999


Q ss_pred             CCCCCccccEEEecCceee
Q 024145          241 DESSYVSGQNLVVDGGFSV  259 (272)
Q Consensus       241 ~~~~~~~G~~i~~dgG~~~  259 (272)
                      +...+++|+++.+|||...
T Consensus       241 ~~~~~~~g~~~~~~gg~~~  259 (265)
T PRK07097        241 DASNFVNGHILYVDGGILA  259 (265)
T ss_pred             cccCCCCCCEEEECCCcee
Confidence            9889999999999999765

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=100.00  E-value=2.8e-42  Score=287.02  Aligned_cols=220  Identities=26%  Similarity=0.302  Sum_probs=198.9

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhC----CceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLG----QDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      .+++|++||||||+|||.++|++|+++|++|+++.|++++++++.+++.    .++.++.+|++++++++++.+++.++.
T Consensus         3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~   82 (265)
T COG0300           3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERG   82 (265)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcC
Confidence            4578999999999999999999999999999999999999998888773    467999999999999999999999998


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhH
Q 024145           88 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISK  167 (272)
Q Consensus        88 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK  167 (272)
                      +.+|+||||||+...  +++.+.++++.++++++|+.+...++++++|.|.+++.|.||+|+|..+..+.|....|++||
T Consensus        83 ~~IdvLVNNAG~g~~--g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p~~avY~ATK  160 (265)
T COG0300          83 GPIDVLVNNAGFGTF--GPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPYMAVYSATK  160 (265)
T ss_pred             CcccEEEECCCcCCc--cchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCcchHHHHHHH
Confidence            899999999999877  899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcC
Q 024145          168 YGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASD  241 (272)
Q Consensus       168 ~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  241 (272)
                      +++.+|+++|..|+.++||+|.+++||++.|+++.. .....       ........+++||++|+..+..+..
T Consensus       161 a~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~~-~~~~~-------~~~~~~~~~~~~~~va~~~~~~l~~  226 (265)
T COG0300         161 AFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFDA-KGSDV-------YLLSPGELVLSPEDVAEAALKALEK  226 (265)
T ss_pred             HHHHHHHHHHHHHhcCCCeEEEEEecCccccccccc-ccccc-------ccccchhhccCHHHHHHHHHHHHhc
Confidence            999999999999999999999999999999999861 11111       0111124678999999999988754

>PRK08303 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.1e-42  Score=298.27  Aligned_cols=242  Identities=20%  Similarity=0.197  Sum_probs=195.7

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCc----------chHHHHHHHh---CCceEEEEecCCCHHHH
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQD----------KLGEDLADKL---GQDVCYIHCDISNEDEV   76 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~----------~~~~~~~~~~---~~~~~~~~~D~~~~~~~   76 (272)
                      +.+++||++|||||++|||++++++|+++|++|++++|+.          +..++..+.+   +.++.++++|+++++++
T Consensus         3 ~~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v   82 (305)
T PRK08303          3 MKPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQV   82 (305)
T ss_pred             CcCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHH
Confidence            4568999999999999999999999999999999999874          2333333333   45688899999999999


Q ss_pred             HHHHHHHHHHhCCccEEEeCC-CCCC--CCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccc
Q 024145           77 INLVDTAVSKFGKLDIMYNNA-GILD--RSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACT  153 (272)
Q Consensus        77 ~~~~~~~~~~~g~id~lv~~a-g~~~--~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~  153 (272)
                      +++++++.+++|++|++|||+ |...  ....++.+.+.++|.+++++|+.+++.++++++|+|.+++.|+||++||..+
T Consensus        83 ~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~  162 (305)
T PRK08303         83 RALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTA  162 (305)
T ss_pred             HHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCccc
Confidence            999999999999999999999 7531  1114577888999999999999999999999999998777899999999765


Q ss_pred             cc---cCCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCC-ChhHHHHHHhhcCCCCCCCCChH
Q 024145          154 EI---AGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGV-DPALIESSMSQMGNLKGEFLKTD  229 (272)
Q Consensus       154 ~~---~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  229 (272)
                      ..   +.+....|++||+|+.+|+++++.|++++||+||+|+||+++|++...... ..+...+... ..++.+++.+||
T Consensus       163 ~~~~~~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~pe  241 (305)
T PRK08303        163 EYNATHYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMMLDAFGVTEENWRDALA-KEPHFAISETPR  241 (305)
T ss_pred             cccCcCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHHHhhccCccchhhhhc-cccccccCCCHH
Confidence            43   334567899999999999999999999999999999999999998542111 1111111111 223236777899


Q ss_pred             hHHHHHHHHhcCCC-CCccccEEE
Q 024145          230 GIANAALYLASDES-SYVSGQNLV  252 (272)
Q Consensus       230 dva~~~~~l~s~~~-~~~~G~~i~  252 (272)
                      |++++++||+++.. .+++|++|.
T Consensus       242 evA~~v~fL~s~~~~~~itG~~l~  265 (305)
T PRK08303        242 YVGRAVAALAADPDVARWNGQSLS  265 (305)
T ss_pred             HHHHHHHHHHcCcchhhcCCcEEE
Confidence            99999999999874 589999875

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.1e-42  Score=297.00  Aligned_cols=246  Identities=21%  Similarity=0.251  Sum_probs=193.9

Q ss_pred             CCCCCcEEEEeCCC--ChHHHHHHHHHHHcCCeEEEeecCcc--------hHHHHH---H-HhCC-----ceEEEEecCC
Q 024145           11 KRLEGKVAIITGGA--SGIGAMAVELFHENGAKVVIADVQDK--------LGEDLA---D-KLGQ-----DVCYIHCDIS   71 (272)
Q Consensus        11 ~~l~~k~vlItGas--~giG~aia~~la~~G~~V~~~~r~~~--------~~~~~~---~-~~~~-----~~~~~~~D~~   71 (272)
                      .+++||++||||++  +|||+++|+.|+++|++|++.++.+.        ..++..   . ..+.     ++..+.+|++
T Consensus         4 ~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~   83 (299)
T PRK06300          4 IDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFD   83 (299)
T ss_pred             cCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhhhcC
Confidence            46799999999995  99999999999999999999765310        000000   0 0000     0111223333


Q ss_pred             C------------------HHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHH
Q 024145           72 N------------------EDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHA  133 (272)
Q Consensus        72 ~------------------~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~  133 (272)
                      +                  .++++++++++.+++|++|+||||||.......++.+.+.++|++++++|+.+++.+++++
T Consensus        84 ~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~  163 (299)
T PRK06300         84 TPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHF  163 (299)
T ss_pred             CCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHH
Confidence            3                  3468999999999999999999999975422367889999999999999999999999999


Q ss_pred             HHhhcCCCCceEEEEecccccccCCCCc-hhhhhHHHHHHHHHHHHHHhcC-CCcEEEEEeCCcccCCcccCCCCChhHH
Q 024145          134 ARVMVPQQKGCILFTASACTEIAGLGSP-AYTISKYGILGLVKCLAAELGQ-YGIRVNCVSPYGLATGMSMKGGVDPALI  211 (272)
Q Consensus       134 ~~~~~~~~~g~iv~iss~~~~~~~~~~~-~Y~~sK~a~~~~~~~la~e~~~-~gi~v~~i~Pg~v~t~~~~~~~~~~~~~  211 (272)
                      +|+|.+  .|+||+++|..+..+.+++. .|++||+|+++|+++++.|+++ +||+||+|+||+++|++..... ..+..
T Consensus       164 ~p~m~~--~G~ii~iss~~~~~~~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~~~-~~~~~  240 (299)
T PRK06300        164 GPIMNP--GGSTISLTYLASMRAVPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKAIG-FIERM  240 (299)
T ss_pred             HHHhhc--CCeEEEEeehhhcCcCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhccc-ccHHH
Confidence            999964  48999999999888888765 8999999999999999999987 5999999999999999865311 11222


Q ss_pred             HHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccccEEEecCceeec
Q 024145          212 ESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~  260 (272)
                      .+......++ ++..+|+|+++.++||+++++.+++|+++.+|||..++
T Consensus       241 ~~~~~~~~p~-~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~~~  288 (299)
T PRK06300        241 VDYYQDWAPL-PEPMEAEQVGAAAAFLVSPLASAITGETLYVDHGANVM  288 (299)
T ss_pred             HHHHHhcCCC-CCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCccee
Confidence            2233333444 78899999999999999999999999999999998875

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.6e-41  Score=286.84  Aligned_cols=245  Identities=30%  Similarity=0.395  Sum_probs=207.8

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeec-CcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCC-
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADV-QDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGK-   89 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~-   89 (272)
                      .+++|++|||||++|||++++++|+++|++|+++.+ +.+..+.+.++++.++.++.+|++++++++++++++.+.+++ 
T Consensus         2 ~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   81 (253)
T PRK08642          2 QISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKP   81 (253)
T ss_pred             CCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            467899999999999999999999999999988655 445555555556667889999999999999999999998887 


Q ss_pred             ccEEEeCCCCCCC----CCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhh
Q 024145           90 LDIMYNNAGILDR----SFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTI  165 (272)
Q Consensus        90 id~lv~~ag~~~~----~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~  165 (272)
                      +|++|||+|....    ...++.+.+.+++++.+++|+.+++.+++.++++|.+++.|+||++||..+..+..++..|++
T Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~  161 (253)
T PRK08642         82 ITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQNPVVPYHDYTT  161 (253)
T ss_pred             CeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCccchHH
Confidence            9999999986421    114577889999999999999999999999999998777899999999877777777889999


Q ss_pred             hHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCC
Q 024145          166 SKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSY  245 (272)
Q Consensus       166 sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  245 (272)
                      ||+|+++++++++++++++||++|+|+||+++|+.....  .++...+.+....++ +++.+|+|+++++.||+++++.+
T Consensus       162 sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~va~~~~~l~~~~~~~  238 (253)
T PRK08642        162 AKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAA--TPDEVFDLIAATTPL-RKVTTPQEFADAVLFFASPWARA  238 (253)
T ss_pred             HHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhcc--CCHHHHHHHHhcCCc-CCCCCHHHHHHHHHHHcCchhcC
Confidence            999999999999999999999999999999999865421  223333333333444 78999999999999999998999


Q ss_pred             ccccEEEecCceee
Q 024145          246 VSGQNLVVDGGFSV  259 (272)
Q Consensus       246 ~~G~~i~~dgG~~~  259 (272)
                      ++|+.|.+|||+..
T Consensus       239 ~~G~~~~vdgg~~~  252 (253)
T PRK08642        239 VTGQNLVVDGGLVM  252 (253)
T ss_pred             ccCCEEEeCCCeec
Confidence            99999999999753

>PRK07677 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-41  Score=286.89  Aligned_cols=243  Identities=28%  Similarity=0.396  Sum_probs=206.9

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   91 (272)
                      ||++|||||++|||++++++|+++|++|++++|+....++..+.+   +.++.++++|++++++++++++++.++++++|
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID   80 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence            689999999999999999999999999999999887766665544   45788999999999999999999999999999


Q ss_pred             EEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCC-CCceEEEEecccccccCCCCchhhhhHHHH
Q 024145           92 IMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQ-QKGCILFTASACTEIAGLGSPAYTISKYGI  170 (272)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~  170 (272)
                      ++|||+|....  .++.+.+.++|++++++|+.+++.++++++++|.++ ..|+||++||..+..+.+....|++||+|+
T Consensus        81 ~lI~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sKaa~  158 (252)
T PRK07677         81 ALINNAAGNFI--CPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGV  158 (252)
T ss_pred             EEEECCCCCCC--CCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCCCCcchHHHHHHH
Confidence            99999997543  567788999999999999999999999999998654 469999999999988888889999999999


Q ss_pred             HHHHHHHHHHhcC-CCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCcccc
Q 024145          171 LGLVKCLAAELGQ-YGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQ  249 (272)
Q Consensus       171 ~~~~~~la~e~~~-~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  249 (272)
                      ++|+++++.|+.+ +||+++.|+||+++|+.........+...+......++ +++.+|+|+++++.||+++...+++|+
T Consensus       159 ~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~va~~~~~l~~~~~~~~~g~  237 (252)
T PRK07677        159 LAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVPL-GRLGTPEEIAGLAYFLLSDEAAYINGT  237 (252)
T ss_pred             HHHHHHHHHHhCcccCeEEEEEeecccccccccccccCCHHHHHHHhccCCC-CCCCCHHHHHHHHHHHcCccccccCCC
Confidence            9999999999975 69999999999999643221111122222223333344 789999999999999999988999999


Q ss_pred             EEEecCceeec
Q 024145          250 NLVVDGGFSVV  260 (272)
Q Consensus       250 ~i~~dgG~~~~  260 (272)
                      .+.+|||.++.
T Consensus       238 ~~~~~gg~~~~  248 (252)
T PRK07677        238 CITMDGGQWLN  248 (252)
T ss_pred             EEEECCCeecC
Confidence            99999998875

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=100.00  E-value=2.2e-41  Score=286.82  Aligned_cols=241  Identities=36%  Similarity=0.496  Sum_probs=209.7

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+..+.+.+++   +.++.++.+|+++.++++++++.+.+.++
T Consensus         8 ~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   87 (255)
T PRK06113          8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLG   87 (255)
T ss_pred             CcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            578999999999999999999999999999999999877666555443   45788999999999999999999999999


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHH
Q 024145           89 KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKY  168 (272)
Q Consensus        89 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~  168 (272)
                      ++|++|||+|...+  .++ +.+.+++++.+++|+.+++.+++++.++|.+.+.++||++||..+..+.+++..|++||+
T Consensus        88 ~~d~li~~ag~~~~--~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  164 (255)
T PRK06113         88 KVDILVNNAGGGGP--KPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKA  164 (255)
T ss_pred             CCCEEEECCCCCCC--CCC-CCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCcchhHHHHH
Confidence            99999999997654  333 678899999999999999999999999998777789999999999998889999999999


Q ss_pred             HHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccc
Q 024145          169 GILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSG  248 (272)
Q Consensus       169 a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  248 (272)
                      |+++++++++.++.++||++|+++||+++|++.... ..+ +.........++ +++.+|+|++++++||+++.+.+++|
T Consensus       165 a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~-~~~-~~~~~~~~~~~~-~~~~~~~d~a~~~~~l~~~~~~~~~G  241 (255)
T PRK06113        165 AASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSV-ITP-EIEQKMLQHTPI-RRLGQPQDIANAALFLCSPAASWVSG  241 (255)
T ss_pred             HHHHHHHHHHHHhhhhCeEEEEEecccccccccccc-cCH-HHHHHHHhcCCC-CCCcCHHHHHHHHHHHcCccccCccC
Confidence            999999999999999999999999999999987632 122 222222333444 77899999999999999999999999


Q ss_pred             cEEEecCcee
Q 024145          249 QNLVVDGGFS  258 (272)
Q Consensus       249 ~~i~~dgG~~  258 (272)
                      ++|.+|||..
T Consensus       242 ~~i~~~gg~~  251 (255)
T PRK06113        242 QILTVSGGGV  251 (255)
T ss_pred             CEEEECCCcc
Confidence            9999999954

>PRK07856 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-41  Score=288.01  Aligned_cols=240  Identities=33%  Similarity=0.413  Sum_probs=207.9

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+.     +..+.++.++++|++++++++++++.+.+.++++
T Consensus         2 ~~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~-----~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   76 (252)
T PRK07856          2 LDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE-----TVDGRPAEFHAADVRDPDQVAALVDAIVERHGRL   76 (252)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh-----hhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            45789999999999999999999999999999999998654     2234578899999999999999999999999999


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCC-CCceEEEEecccccccCCCCchhhhhHHH
Q 024145           91 DIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQ-QKGCILFTASACTEIAGLGSPAYTISKYG  169 (272)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~iss~~~~~~~~~~~~Y~~sK~a  169 (272)
                      |++|||+|....  .++.+.+.++|++.+++|+.+++.+++.+.++|.++ ..|+||++||..+..+.+++..|++||++
T Consensus        77 d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a  154 (252)
T PRK07856         77 DVLVNNAGGSPY--ALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPGTAAYGAAKAG  154 (252)
T ss_pred             CEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCCCCchhHHHHHH
Confidence            999999997654  567788899999999999999999999999999764 46899999999999999999999999999


Q ss_pred             HHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCcccc
Q 024145          170 ILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQ  249 (272)
Q Consensus       170 ~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  249 (272)
                      +++|++.++.|++++ |++++|+||+++|++........+.. +......+. +++.+|+|+++.++||+++.+.+++|+
T Consensus       155 ~~~l~~~la~e~~~~-i~v~~i~Pg~v~t~~~~~~~~~~~~~-~~~~~~~~~-~~~~~p~~va~~~~~L~~~~~~~i~G~  231 (252)
T PRK07856        155 LLNLTRSLAVEWAPK-VRVNAVVVGLVRTEQSELHYGDAEGI-AAVAATVPL-GRLATPADIAWACLFLASDLASYVSGA  231 (252)
T ss_pred             HHHHHHHHHHHhcCC-eEEEEEEeccccChHHhhhccCHHHH-HHHhhcCCC-CCCcCHHHHHHHHHHHcCcccCCccCC
Confidence            999999999999987 99999999999999865322222222 222333344 788999999999999999999999999


Q ss_pred             EEEecCceeec
Q 024145          250 NLVVDGGFSVV  260 (272)
Q Consensus       250 ~i~~dgG~~~~  260 (272)
                      .|.+|||....
T Consensus       232 ~i~vdgg~~~~  242 (252)
T PRK07856        232 NLEVHGGGERP  242 (252)
T ss_pred             EEEECCCcchH
Confidence            99999997653

>PRK12743 oxidoreductase; Provisional

Probab=100.00  E-value=2e-41  Score=287.25  Aligned_cols=247  Identities=32%  Similarity=0.450  Sum_probs=211.6

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecC-cchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGAKVVIADVQ-DKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      +|++|||||++|||++++++|+++|++|+++.++ .+..+.+.+++   +.++.++.+|++++++++++++++.++++++
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI   81 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            6899999999999999999999999999888654 44444444433   5679999999999999999999999999999


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCC-CCceEEEEecccccccCCCCchhhhhHHH
Q 024145           91 DIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQ-QKGCILFTASACTEIAGLGSPAYTISKYG  169 (272)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~iss~~~~~~~~~~~~Y~~sK~a  169 (272)
                      |++|||+|....  ..+.+.+.+++++++++|+.+++.+++++.++|.++ +.|+||++||..+..+.++...|+++|++
T Consensus        82 d~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a  159 (256)
T PRK12743         82 DVLVNNAGAMTK--APFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPLPGASAYTAAKHA  159 (256)
T ss_pred             CEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCCCCcchhHHHHHH
Confidence            999999998654  567788999999999999999999999999999764 36899999999999999999999999999


Q ss_pred             HHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCcccc
Q 024145          170 ILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQ  249 (272)
Q Consensus       170 ~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  249 (272)
                      +++++++++.++.++||+++.|+||+++|++...   ...+.........+. ++..+|+|+++++.|++++...+++|+
T Consensus       160 ~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~---~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~~~~~~~~~G~  235 (256)
T PRK12743        160 LGGLTKAMALELVEHGILVNAVAPGAIATPMNGM---DDSDVKPDSRPGIPL-GRPGDTHEIASLVAWLCSEGASYTTGQ  235 (256)
T ss_pred             HHHHHHHHHHHhhhhCeEEEEEEeCCccCccccc---cChHHHHHHHhcCCC-CCCCCHHHHHHHHHHHhCccccCcCCc
Confidence            9999999999999999999999999999998753   122222222223333 678899999999999999999999999


Q ss_pred             EEEecCceeeccCccccc
Q 024145          250 NLVVDGGFSVVNPTVMRA  267 (272)
Q Consensus       250 ~i~~dgG~~~~~~~~~~~  267 (272)
                      .+.+|||..++.|.+-.+
T Consensus       236 ~~~~dgg~~~~~~~~~~~  253 (256)
T PRK12743        236 SLIVDGGFMLANPQFNSE  253 (256)
T ss_pred             EEEECCCccccCCccccc
Confidence            999999998887776443

>PRK05717 oxidoreductase; Validated

Probab=100.00  E-value=3e-41  Score=285.95  Aligned_cols=244  Identities=30%  Similarity=0.447  Sum_probs=210.0

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      .+++||+++||||++|||++++++|+++|++|++++|++...++..++++.++.++++|+++.++++++++++.++++++
T Consensus         6 ~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   85 (255)
T PRK05717          6 PGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRL   85 (255)
T ss_pred             cccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            45789999999999999999999999999999999998777776666666778999999999999999999999999999


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHH
Q 024145           91 DIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGI  170 (272)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~  170 (272)
                      |++|||||.......++.+.+.++|++.+++|+.+++.+++++.|+|.+. .|+||++||..+..+.+.+..|++||+|+
T Consensus        86 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~ii~~sS~~~~~~~~~~~~Y~~sKaa~  164 (255)
T PRK05717         86 DALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAH-NGAIVNLASTRARQSEPDTEAYAASKGGL  164 (255)
T ss_pred             CEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CcEEEEEcchhhcCCCCCCcchHHHHHHH
Confidence            99999999865433567788999999999999999999999999998653 58999999999988888999999999999


Q ss_pred             HHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccccE
Q 024145          171 LGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQN  250 (272)
Q Consensus       171 ~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~  250 (272)
                      +.++++++.++.+ +|++++|+||+++|++.....  ............+ .+++.+|+|++..+.+++++...+++|+.
T Consensus       165 ~~~~~~la~~~~~-~i~v~~i~Pg~i~t~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~va~~~~~l~~~~~~~~~g~~  240 (255)
T PRK05717        165 LALTHALAISLGP-EIRVNAVSPGWIDARDPSQRR--AEPLSEADHAQHP-AGRVGTVEDVAAMVAWLLSRQAGFVTGQE  240 (255)
T ss_pred             HHHHHHHHHHhcC-CCEEEEEecccCcCCcccccc--chHHHHHHhhcCC-CCCCcCHHHHHHHHHHHcCchhcCccCcE
Confidence            9999999999986 499999999999999754311  1111111122223 37889999999999999998888999999


Q ss_pred             EEecCceee
Q 024145          251 LVVDGGFSV  259 (272)
Q Consensus       251 i~~dgG~~~  259 (272)
                      +.+|||...
T Consensus       241 ~~~~gg~~~  249 (255)
T PRK05717        241 FVVDGGMTR  249 (255)
T ss_pred             EEECCCceE
Confidence            999999764

>PRK09242 tropinone reductase; Provisional

Probab=100.00  E-value=2.4e-41  Score=286.81  Aligned_cols=246  Identities=26%  Similarity=0.375  Sum_probs=215.3

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh-----CCceEEEEecCCCHHHHHHHHHHHH
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL-----GQDVCYIHCDISNEDEVINLVDTAV   84 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~   84 (272)
                      .++++||+++||||++|||++++++|+++|++|++++|+.+..++..+++     +.++.++.+|++++++++.+++++.
T Consensus         4 ~~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   83 (257)
T PRK09242          4 RWRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVE   83 (257)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            45689999999999999999999999999999999999987777666554     3578899999999999999999999


Q ss_pred             HHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhh
Q 024145           85 SKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYT  164 (272)
Q Consensus        85 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~  164 (272)
                      ++++++|++|||+|....  .+..+.+.+++++.+++|+.+++.++++++|+|.+++.++||++||..+..+.+....|+
T Consensus        84 ~~~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~  161 (257)
T PRK09242         84 DHWDGLHILVNNAGGNIR--KAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRSGAPYG  161 (257)
T ss_pred             HHcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCCCCCcchH
Confidence            999999999999998644  567788999999999999999999999999999887789999999999988889999999


Q ss_pred             hhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCC
Q 024145          165 ISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESS  244 (272)
Q Consensus       165 ~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  244 (272)
                      ++|++++.++++++.|+.++||++++|+||+++|++........+.... .....+. +++.+|+|+++++.||+++...
T Consensus       162 ~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~va~~~~~l~~~~~~  239 (257)
T PRK09242        162 MTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSDPDYYEQ-VIERTPM-RRVGEPEEVAAAVAFLCMPAAS  239 (257)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCChHHHHH-HHhcCCC-CCCcCHHHHHHHHHHHhCcccc
Confidence            9999999999999999999999999999999999987643222222222 2233333 7889999999999999998888


Q ss_pred             CccccEEEecCceee
Q 024145          245 YVSGQNLVVDGGFSV  259 (272)
Q Consensus       245 ~~~G~~i~~dgG~~~  259 (272)
                      +++|+.+.+|||...
T Consensus       240 ~~~g~~i~~~gg~~~  254 (257)
T PRK09242        240 YITGQCIAVDGGFLR  254 (257)
T ss_pred             cccCCEEEECCCeEe
Confidence            999999999999654

>PRK08226 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-41  Score=288.26  Aligned_cols=245  Identities=34%  Similarity=0.526  Sum_probs=208.2

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+. .+..+++   +.++.++.+|++++++++++++++.+++
T Consensus         2 ~~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   80 (263)
T PRK08226          2 GKLTGKTALITGALQGIGEGIARVFARHGANLILLDISPEI-EKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKE   80 (263)
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHH-HHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            45789999999999999999999999999999999998642 2222222   4578899999999999999999999999


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccccc-ccCCCCchhhhh
Q 024145           88 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTE-IAGLGSPAYTIS  166 (272)
Q Consensus        88 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~-~~~~~~~~Y~~s  166 (272)
                      +++|++|||+|....  .++.+.+.+++++.+++|+.+++.+++.+++++.+++.++||++||..+. .+.+.+..|+++
T Consensus        81 ~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~Y~~s  158 (263)
T PRK08226         81 GRIDILVNNAGVCRL--GSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALT  158 (263)
T ss_pred             CCCCEEEECCCcCCC--CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcccCCCCcchHHHH
Confidence            999999999998654  67788899999999999999999999999999977777899999998774 566788899999


Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCC-----CChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcC
Q 024145          167 KYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGG-----VDPALIESSMSQMGNLKGEFLKTDGIANAALYLASD  241 (272)
Q Consensus       167 K~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  241 (272)
                      |+++++++++++.|+.++||++++|+||+++|++.....     ...+..........++ +++.+|+|+++.++||+++
T Consensus       159 K~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~va~~~~~l~~~  237 (263)
T PRK08226        159 KAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPL-RRLADPLEVGELAAFLASD  237 (263)
T ss_pred             HHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCCC-CCCCCHHHHHHHHHHHcCc
Confidence            999999999999999999999999999999999865321     0112222222233344 7889999999999999999


Q ss_pred             CCCCccccEEEecCceee
Q 024145          242 ESSYVSGQNLVVDGGFSV  259 (272)
Q Consensus       242 ~~~~~~G~~i~~dgG~~~  259 (272)
                      .+.+++|++|.+|||.++
T Consensus       238 ~~~~~~g~~i~~dgg~~~  255 (263)
T PRK08226        238 ESSYLTGTQNVIDGGSTL  255 (263)
T ss_pred             hhcCCcCceEeECCCccc
Confidence            999999999999999765

>PRK06125 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-41  Score=288.62  Aligned_cols=242  Identities=26%  Similarity=0.308  Sum_probs=206.5

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh----CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL----GQDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      ++++|++||||+++|||+++++.|+++|++|++++|+++..++..+++    +.++.++.+|+++++++++++++    +
T Consensus         4 ~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~----~   79 (259)
T PRK06125          4 HLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAE----A   79 (259)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHH----h
Confidence            578999999999999999999999999999999999987776655544    45688999999999999887653    5


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhH
Q 024145           88 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISK  167 (272)
Q Consensus        88 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK  167 (272)
                      +++|++|||+|....  .++.+.+.++|++.+++|+.+++.++++++|.|.+++.|+||++||..+..+.+.+..|+++|
T Consensus        80 g~id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~ask  157 (259)
T PRK06125         80 GDIDILVNNAGAIPG--GGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGENPDADYICGSAGN  157 (259)
T ss_pred             CCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccCCCCCchHhHHHH
Confidence            789999999998654  678899999999999999999999999999999887789999999999888888888999999


Q ss_pred             HHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCC-------CChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhc
Q 024145          168 YGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGG-------VDPALIESSMSQMGNLKGEFLKTDGIANAALYLAS  240 (272)
Q Consensus       168 ~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  240 (272)
                      +|+++++++++.|+.++||+||+|+||+++|++.....       ...++..+......+. +++.+|+|++++++||++
T Consensus       158 ~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~va~~~~~l~~  236 (259)
T PRK06125        158 AALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAGLPL-GRPATPEEVADLVAFLAS  236 (259)
T ss_pred             HHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHhccCCc-CCCcCHHHHHHHHHHHcC
Confidence            99999999999999999999999999999999643210       0111111122222333 788999999999999999


Q ss_pred             CCCCCccccEEEecCceeec
Q 024145          241 DESSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       241 ~~~~~~~G~~i~~dgG~~~~  260 (272)
                      +.+.++||+.|.+|||....
T Consensus       237 ~~~~~~~G~~i~vdgg~~~~  256 (259)
T PRK06125        237 PRSGYTSGTVVTVDGGISAR  256 (259)
T ss_pred             chhccccCceEEecCCeeec
Confidence            99999999999999998764

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-41  Score=286.37  Aligned_cols=247  Identities=31%  Similarity=0.453  Sum_probs=217.6

Q ss_pred             cCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHH
Q 024145            9 PFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVS   85 (272)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (272)
                      +..+++||+++||||+++||++++++|+++|++|++++|+++..+++.+++   +.++.++.+|+++++++.++++++.+
T Consensus         5 ~~~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   84 (256)
T PRK06124          5 QRFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDA   84 (256)
T ss_pred             cccCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            456689999999999999999999999999999999999987666655544   45689999999999999999999999


Q ss_pred             HhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhh
Q 024145           86 KFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTI  165 (272)
Q Consensus        86 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~  165 (272)
                      .++++|++|||+|....  .++.+.+.++|++.+++|+.+++.+++.+++.|.+++.+++|++||..+..+.+++..|++
T Consensus        85 ~~~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~  162 (256)
T PRK06124         85 EHGRLDILVNNVGARDR--RPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARAGDAVYPA  162 (256)
T ss_pred             hcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCCCCccHhHH
Confidence            99999999999998654  6788889999999999999999999999999998778899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCC
Q 024145          166 SKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSY  245 (272)
Q Consensus       166 sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  245 (272)
                      +|++++.+++.++.|+.++||++++|+||+++|++...... .+...+.+....+. +++.+|+|++.++++|+++++.+
T Consensus       163 sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~a~~~~~l~~~~~~~  240 (256)
T PRK06124        163 AKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAA-DPAVGPWLAQRTPL-GRWGRPEEIAGAAVFLASPAASY  240 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhcc-ChHHHHHHHhcCCC-CCCCCHHHHHHHHHHHcCcccCC
Confidence            99999999999999999999999999999999998653221 22333334444444 78899999999999999999999


Q ss_pred             ccccEEEecCceee
Q 024145          246 VSGQNLVVDGGFSV  259 (272)
Q Consensus       246 ~~G~~i~~dgG~~~  259 (272)
                      ++|+.+.+|||..+
T Consensus       241 ~~G~~i~~dgg~~~  254 (256)
T PRK06124        241 VNGHVLAVDGGYSV  254 (256)
T ss_pred             cCCCEEEECCCccc
Confidence            99999999999764

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=4.3e-41  Score=285.96  Aligned_cols=250  Identities=36%  Similarity=0.530  Sum_probs=212.5

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcc-hHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDK-LGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~-~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (272)
                      .++++|++|||||++|||++++++|+++|++|+++.|+.. ..+...+++   +.++.++.+|++|.++++++++.+.++
T Consensus         3 ~~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~   82 (261)
T PRK08936          3 SDLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKE   82 (261)
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999998888543 333333333   457889999999999999999999999


Q ss_pred             hCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCC-CceEEEEecccccccCCCCchhhh
Q 024145           87 FGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ-KGCILFTASACTEIAGLGSPAYTI  165 (272)
Q Consensus        87 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~Y~~  165 (272)
                      ++++|++|||+|....  .++.+.+.++|++.+++|+.+++.+++.++++|.+++ .|+||++||..+..+.+.+..|++
T Consensus        83 ~g~id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~  160 (261)
T PRK08936         83 FGTLDVMINNAGIENA--VPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWPLFVHYAA  160 (261)
T ss_pred             cCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCCCCCcccHH
Confidence            9999999999998655  5677889999999999999999999999999997754 689999999998888899999999


Q ss_pred             hHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCC
Q 024145          166 SKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSY  245 (272)
Q Consensus       166 sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  245 (272)
                      +|+|+++++++++.|+.++||++++|+||+++|++.......++.. .......+. +++.+|+|+++.++||+++.+.+
T Consensus       161 sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~va~~~~~l~s~~~~~  238 (261)
T PRK08936        161 SKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFADPKQR-ADVESMIPM-GYIGKPEEIAAVAAWLASSEASY  238 (261)
T ss_pred             HHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCCHHHH-HHHHhcCCC-CCCcCHHHHHHHHHHHcCcccCC
Confidence            9999999999999999999999999999999999865322222222 222233344 78999999999999999999999


Q ss_pred             ccccEEEecCceeeccCccc
Q 024145          246 VSGQNLVVDGGFSVVNPTVM  265 (272)
Q Consensus       246 ~~G~~i~~dgG~~~~~~~~~  265 (272)
                      ++|+++.+|||..+ .|..+
T Consensus       239 ~~G~~i~~d~g~~~-~~~~~  257 (261)
T PRK08936        239 VTGITLFADGGMTL-YPSFQ  257 (261)
T ss_pred             ccCcEEEECCCccc-Ccccc
Confidence            99999999999774 35443

>PRK06523 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4e-41  Score=285.89  Aligned_cols=242  Identities=24%  Similarity=0.347  Sum_probs=205.5

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      .+++||++|||||++|||++++++|+++|++|++++|++..      ..+.++.++++|++|+++++++++++.++++++
T Consensus         5 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~------~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   78 (260)
T PRK06523          5 LELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPD------DLPEGVEFVAADLTTAEGCAAVARAVLERLGGV   78 (260)
T ss_pred             cCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhh------hcCCceeEEecCCCCHHHHHHHHHHHHHHcCCC
Confidence            46889999999999999999999999999999999997643      234568899999999999999999999999999


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCC-CCchhhhhHHH
Q 024145           91 DIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGL-GSPAYTISKYG  169 (272)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~-~~~~Y~~sK~a  169 (272)
                      |++|||||.......++.+.+.++|++.+++|+.+++.+++.++++|.+++.|+||++||..+..+.+ .+..|++||++
T Consensus        79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~~Y~~sK~a  158 (260)
T PRK06523         79 DILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLPESTTAYAAAKAA  158 (260)
T ss_pred             CEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCCcchhHHHHHH
Confidence            99999999754333567788999999999999999999999999999887789999999998887755 78899999999


Q ss_pred             HHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCC--------CChhHHHHH-Hh--hcCCCCCCCCChHhHHHHHHHH
Q 024145          170 ILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGG--------VDPALIESS-MS--QMGNLKGEFLKTDGIANAALYL  238 (272)
Q Consensus       170 ~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~--------~~~~~~~~~-~~--~~~~~~~~~~~~~dva~~~~~l  238 (272)
                      ++.++++++.|+.++||++++|+||+++|++.....        ...+...+. ..  ...++ +++.+|+|++++++||
T Consensus       159 ~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~va~~~~~l  237 (260)
T PRK06523        159 LSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIPL-GRPAEPEEVAELIAFL  237 (260)
T ss_pred             HHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccCcc-CCCCCHHHHHHHHHHH
Confidence            999999999999999999999999999999864210        001111111 11  11233 7889999999999999


Q ss_pred             hcCCCCCccccEEEecCceee
Q 024145          239 ASDESSYVSGQNLVVDGGFSV  259 (272)
Q Consensus       239 ~s~~~~~~~G~~i~~dgG~~~  259 (272)
                      ++++..+++|+.+.+|||...
T Consensus       238 ~s~~~~~~~G~~~~vdgg~~~  258 (260)
T PRK06523        238 ASDRAASITGTEYVIDGGTVP  258 (260)
T ss_pred             hCcccccccCceEEecCCccC
Confidence            999999999999999999654

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=100.00  E-value=1e-41  Score=290.48  Aligned_cols=242  Identities=31%  Similarity=0.459  Sum_probs=204.7

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGK   89 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (272)
                      +.++++|++|||||++|||++++++|+++|++|++++|++...+      ..++.++.+|++++++++++++++.+++++
T Consensus         4 ~~~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   77 (266)
T PRK06171          4 WLNLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ------HENYQFVPTDVSSAEEVNHTVAEIIEKFGR   77 (266)
T ss_pred             cccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc------cCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            35689999999999999999999999999999999998765432      236788999999999999999999999999


Q ss_pred             ccEEEeCCCCCCCC-------CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCch
Q 024145           90 LDIMYNNAGILDRS-------FGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPA  162 (272)
Q Consensus        90 id~lv~~ag~~~~~-------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  162 (272)
                      +|++|||||...+.       ..++.+.+.++|++++++|+.+++.+++++.++|.+++.|+||++||..+..+.+++..
T Consensus        78 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  157 (266)
T PRK06171         78 IDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEGQSC  157 (266)
T ss_pred             CCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCCch
Confidence            99999999975431       01234678999999999999999999999999998877899999999999888899999


Q ss_pred             hhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCccc-CCcccCCC---------CChhHHHHHHhh--cCCCCCCCCChHh
Q 024145          163 YTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLA-TGMSMKGG---------VDPALIESSMSQ--MGNLKGEFLKTDG  230 (272)
Q Consensus       163 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~-t~~~~~~~---------~~~~~~~~~~~~--~~~~~~~~~~~~d  230 (272)
                      |++||+++++|+++++.|++++||++|+|+||+++ |++.....         ...+...+.+..  ..++ +++.+|+|
T Consensus       158 Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~~~e  236 (266)
T PRK06171        158 YAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTIPL-GRSGKLSE  236 (266)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhcccccccC-CCCCCHHH
Confidence            99999999999999999999999999999999997 56533110         011111222222  2344 89999999


Q ss_pred             HHHHHHHHhcCCCCCccccEEEecCcee
Q 024145          231 IANAALYLASDESSYVSGQNLVVDGGFS  258 (272)
Q Consensus       231 va~~~~~l~s~~~~~~~G~~i~~dgG~~  258 (272)
                      +|+++.||+++.+++++|++|.+|||+.
T Consensus       237 va~~~~fl~s~~~~~itG~~i~vdgg~~  264 (266)
T PRK06171        237 VADLVCYLLSDRASYITGVTTNIAGGKT  264 (266)
T ss_pred             hhhheeeeeccccccceeeEEEecCccc
Confidence            9999999999999999999999999965

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=100.00  E-value=7.5e-41  Score=284.19  Aligned_cols=242  Identities=27%  Similarity=0.356  Sum_probs=200.7

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      ++++|++|||||++|||++++++|+++|++|++++|++. .++..+++   +.++.++.+|+++.++++++++++.++++
T Consensus         5 ~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (260)
T PRK12823          5 RFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFG   83 (260)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence            478999999999999999999999999999999999753 33343333   45788999999999999999999999999


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHH
Q 024145           89 KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKY  168 (272)
Q Consensus        89 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~  168 (272)
                      ++|++|||||.... ..++.+.+.+++++.+++|+.+++.+++.++|+|.+++.|+||++||..+..  +...+|++||+
T Consensus        84 ~id~lv~nAg~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~--~~~~~Y~~sK~  160 (260)
T PRK12823         84 RIDVLINNVGGTIW-AKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRG--INRVPYSAAKG  160 (260)
T ss_pred             CCeEEEECCccccC-CCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccC--CCCCccHHHHH
Confidence            99999999996532 2567888999999999999999999999999999887789999999987642  34568999999


Q ss_pred             HHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCC------CC-C---hhHHHHHHhhcCCCCCCCCChHhHHHHHHHH
Q 024145          169 GILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKG------GV-D---PALIESSMSQMGNLKGEFLKTDGIANAALYL  238 (272)
Q Consensus       169 a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~------~~-~---~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  238 (272)
                      |++.|+++++.|++++||++++|+||+++||+....      .. .   .....+......++ +++.+|+|++++++||
T Consensus       161 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l  239 (260)
T PRK12823        161 GVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLM-KRYGTIDEQVAAILFL  239 (260)
T ss_pred             HHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCc-ccCCCHHHHHHHHHHH
Confidence            999999999999999999999999999999863210      00 0   00111111222333 7889999999999999


Q ss_pred             hcCCCCCccccEEEecCcee
Q 024145          239 ASDESSYVSGQNLVVDGGFS  258 (272)
Q Consensus       239 ~s~~~~~~~G~~i~~dgG~~  258 (272)
                      +++++.+++|+.+.+|||..
T Consensus       240 ~s~~~~~~~g~~~~v~gg~~  259 (260)
T PRK12823        240 ASDEASYITGTVLPVGGGDL  259 (260)
T ss_pred             cCcccccccCcEEeecCCCC
Confidence            99988999999999999963

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.5e-41  Score=284.68  Aligned_cols=192  Identities=31%  Similarity=0.438  Sum_probs=176.4

Q ss_pred             cCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh----CCc-eEEEEecCCCHHHHHHHHHHH
Q 024145            9 PFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL----GQD-VCYIHCDISNEDEVINLVDTA   83 (272)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----~~~-~~~~~~D~~~~~~~~~~~~~~   83 (272)
                      .+.++.||+|+|||||+|||.++|+.|+++|++++++.|+..+++.+.+++    ... +..++||++|.++++++++++
T Consensus         6 ~~e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~   85 (282)
T KOG1205|consen    6 FMERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWA   85 (282)
T ss_pred             cHHHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHH
Confidence            456789999999999999999999999999999999988887777665444    344 999999999999999999999


Q ss_pred             HHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchh
Q 024145           84 VSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAY  163 (272)
Q Consensus        84 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y  163 (272)
                      ..++|++|+||||||+...  ....+.+.++++.+|++|++|+..++++++|+|++++.|+||++||+.|..+.|....|
T Consensus        86 ~~~fg~vDvLVNNAG~~~~--~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~~~~Y  163 (282)
T KOG1205|consen   86 IRHFGRVDVLVNNAGISLV--GFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPFRSIY  163 (282)
T ss_pred             HHhcCCCCEEEecCccccc--cccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCccccc
Confidence            9999999999999999874  77888899999999999999999999999999999888999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHhcCCC--cEEEEEeCCcccCCcccC
Q 024145          164 TISKYGILGLVKCLAAELGQYG--IRVNCVSPYGLATGMSMK  203 (272)
Q Consensus       164 ~~sK~a~~~~~~~la~e~~~~g--i~v~~i~Pg~v~t~~~~~  203 (272)
                      ++||+|+++|..+|..|+.+.+  |++ .|+||+|+|++...
T Consensus       164 ~ASK~Al~~f~etLR~El~~~~~~i~i-~V~PG~V~Te~~~~  204 (282)
T KOG1205|consen  164 SASKHALEGFFETLRQELIPLGTIIII-LVSPGPIETEFTGK  204 (282)
T ss_pred             chHHHHHHHHHHHHHHHhhccCceEEE-EEecCceeecccch
Confidence            9999999999999999999987  555 99999999998764

>PRK06483 dihydromonapterin reductase; Provisional

Probab=100.00  E-value=1e-40  Score=279.47  Aligned_cols=232  Identities=19%  Similarity=0.193  Sum_probs=196.6

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEE
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMY   94 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv   94 (272)
                      +|++|||||++|||++++++|+++|++|++++|+++...+..+..  .+.++.+|++++++++++++++.+.++++|++|
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv   79 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQA--GAQCIQADFSTNAGIMAFIDELKQHTDGLRAII   79 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc--CCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEE
Confidence            579999999999999999999999999999999876543333333  367899999999999999999999999999999


Q ss_pred             eCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCC--CceEEEEecccccccCCCCchhhhhHHHHHH
Q 024145           95 NNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ--KGCILFTASACTEIAGLGSPAYTISKYGILG  172 (272)
Q Consensus        95 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~  172 (272)
                      ||||....  ....+.+.++|++++++|+.+++.+++.+++.|.+++  .|+||++||..+..+.+.+..|++||+|+++
T Consensus        80 ~~ag~~~~--~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~asKaal~~  157 (236)
T PRK06483         80 HNASDWLA--EKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSDKHIAYAASKAALDN  157 (236)
T ss_pred             ECCccccC--CCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCCCCCccHHHHHHHHHH
Confidence            99997644  3456778999999999999999999999999998765  6899999999988888889999999999999


Q ss_pred             HHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccccEEE
Q 024145          173 LVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLV  252 (272)
Q Consensus       173 ~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~  252 (272)
                      |+++++.|+++ +|++|+|+||++.|+...    . +..........++ +++..|+|+++++.||++  +.+++|++|.
T Consensus       158 l~~~~a~e~~~-~irvn~v~Pg~~~~~~~~----~-~~~~~~~~~~~~~-~~~~~~~~va~~~~~l~~--~~~~~G~~i~  228 (236)
T PRK06483        158 MTLSFAAKLAP-EVKVNSIAPALILFNEGD----D-AAYRQKALAKSLL-KIEPGEEEIIDLVDYLLT--SCYVTGRSLP  228 (236)
T ss_pred             HHHHHHHHHCC-CcEEEEEccCceecCCCC----C-HHHHHHHhccCcc-ccCCCHHHHHHHHHHHhc--CCCcCCcEEE
Confidence            99999999987 599999999999875421    1 1222222222334 678899999999999997  5799999999


Q ss_pred             ecCceee
Q 024145          253 VDGGFSV  259 (272)
Q Consensus       253 ~dgG~~~  259 (272)
                      +|||.++
T Consensus       229 vdgg~~~  235 (236)
T PRK06483        229 VDGGRHL  235 (236)
T ss_pred             eCccccc
Confidence            9999764

>PRK06500 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-40  Score=280.60  Aligned_cols=243  Identities=33%  Similarity=0.482  Sum_probs=210.4

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      .++++|+++||||+++||++++++|+++|++|++++|+.+..++..++++.++.++++|+++.++++.+++.+.+.++++
T Consensus         2 ~~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (249)
T PRK06500          2 SRLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRL   81 (249)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            35688999999999999999999999999999999998877777777777788999999999999999999999999999


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHH
Q 024145           91 DIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGI  170 (272)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~  170 (272)
                      |++|||+|....  .++.+.+.+++++.+++|+.+++.+++++.|+|.+  .+++|+++|..+..+.+....|+.+|+++
T Consensus        82 d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~i~~~S~~~~~~~~~~~~Y~~sK~a~  157 (249)
T PRK06500         82 DAVFINAGVAKF--APLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLAN--PASIVLNGSINAHIGMPNSSVYAASKAAL  157 (249)
T ss_pred             CEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCEEEEEechHhccCCCCccHHHHHHHHH
Confidence            999999998654  56778899999999999999999999999999853  47899999988888888999999999999


Q ss_pred             HHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCCh---hHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCcc
Q 024145          171 LGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDP---ALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVS  247 (272)
Q Consensus       171 ~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  247 (272)
                      ++++++++.|+.++||++++++||+++||+........   ....+......++ .++.+|+|+++++++++++...+++
T Consensus       158 ~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~va~~~~~l~~~~~~~~~  236 (249)
T PRK06500        158 LSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPL-GRFGTPEEIAKAVLYLASDESAFIV  236 (249)
T ss_pred             HHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHcCccccCcc
Confidence            99999999999999999999999999999865321111   1122222223333 6788999999999999998889999


Q ss_pred             ccEEEecCcee
Q 024145          248 GQNLVVDGGFS  258 (272)
Q Consensus       248 G~~i~~dgG~~  258 (272)
                      |+.+.+|||.+
T Consensus       237 g~~i~~~gg~~  247 (249)
T PRK06500        237 GSEIIVDGGMS  247 (249)
T ss_pred             CCeEEECCCcc
Confidence            99999999964

>PRK06940 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-40  Score=284.26  Aligned_cols=231  Identities=26%  Similarity=0.323  Sum_probs=191.2

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   91 (272)
                      +|+++|||+ +|||++++++|+ +|++|++++|+.+..++..+++   +.++.++++|++|.++++++++++ ++++++|
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~-~~~g~id   78 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATA-QTLGPVT   78 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHH-HhcCCCC
Confidence            589999998 699999999996 8999999999877666665544   446889999999999999999988 5678999


Q ss_pred             EEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccC--------------
Q 024145           92 IMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAG--------------  157 (272)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~--------------  157 (272)
                      +||||||...         ..+++++++++|+.+++.+++.+.|+|.+  .|++|++||..+..+.              
T Consensus        79 ~li~nAG~~~---------~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~g~iv~isS~~~~~~~~~~~~~~~~~~~~~  147 (275)
T PRK06940         79 GLVHTAGVSP---------SQASPEAILKVDLYGTALVLEEFGKVIAP--GGAGVVIASQSGHRLPALTAEQERALATTP  147 (275)
T ss_pred             EEEECCCcCC---------chhhHHHHHHHhhHHHHHHHHHHHHHHhh--CCCEEEEEecccccCcccchhhhccccccc
Confidence            9999999742         13678999999999999999999999964  3778999998776542              


Q ss_pred             ----------------CCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCC-ChhHHHHHHhhcCC
Q 024145          158 ----------------LGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGV-DPALIESSMSQMGN  220 (272)
Q Consensus       158 ----------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~-~~~~~~~~~~~~~~  220 (272)
                                      +.+..|++||+|++.++++++.|++++||+||+|+||+++|++...... ..+...+......+
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p  227 (275)
T PRK06940        148 TEELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFAKSP  227 (275)
T ss_pred             cccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHHHhhhCC
Confidence                            2467899999999999999999999999999999999999998643111 11111122222334


Q ss_pred             CCCCCCChHhHHHHHHHHhcCCCCCccccEEEecCceeec
Q 024145          221 LKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       221 ~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~  260 (272)
                      + +++.+|||+|++++||+++.+++++|+.+.+|||....
T Consensus       228 ~-~r~~~peeia~~~~fL~s~~~~~itG~~i~vdgg~~~~  266 (275)
T PRK06940        228 A-GRPGTPDEIAALAEFLMGPRGSFITGSDFLVDGGATAS  266 (275)
T ss_pred             c-ccCCCHHHHHHHHHHHcCcccCcccCceEEEcCCeEEE
Confidence            4 88999999999999999999999999999999998754

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=7e-43  Score=266.39  Aligned_cols=241  Identities=29%  Similarity=0.372  Sum_probs=216.1

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      .++.|+++++||+..|||+++++.|++.|++|+++.|+++.+..+.++.+..+..+..|+++-+.+.+++..    .+.+
T Consensus         3 t~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~~----v~pi   78 (245)
T KOG1207|consen    3 TSLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETPSLIIPIVGDLSAWEALFKLLVP----VFPI   78 (245)
T ss_pred             ccccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCCcceeeeEecccHHHHHHHhhcc----cCch
Confidence            467999999999999999999999999999999999999999999999888899999999997766655543    3589


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCC-CCceEEEEecccccccCCCCchhhhhHHH
Q 024145           91 DIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQ-QKGCILFTASACTEIAGLGSPAYTISKYG  169 (272)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~iss~~~~~~~~~~~~Y~~sK~a  169 (272)
                      |.+|||||+.-.  .++.+.+.+++++.|++|+.+.+++.|...+-+..+ .+|.||++||.++..+...+..||++|+|
T Consensus        79 dgLVNNAgvA~~--~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~~nHtvYcatKaA  156 (245)
T KOG1207|consen   79 DGLVNNAGVATN--HPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPLDNHTVYCATKAA  156 (245)
T ss_pred             hhhhccchhhhc--chHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccccCCceEEeecHHH
Confidence            999999998765  789999999999999999999999999866655443 57889999999999999999999999999


Q ss_pred             HHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCcccc
Q 024145          170 ILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQ  249 (272)
Q Consensus       170 ~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  249 (272)
                      +++++|++|.|+++++||||++.|-.+-|+|.++....+......+.. .|+ ++|...++++++++||+|+.+++.+|.
T Consensus       157 LDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP~K~k~mL~r-iPl-~rFaEV~eVVnA~lfLLSd~ssmttGs  234 (245)
T KOG1207|consen  157 LDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDPDKKKKMLDR-IPL-KRFAEVDEVVNAVLFLLSDNSSMTTGS  234 (245)
T ss_pred             HHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCCchhccchhhh-Cch-hhhhHHHHHHhhheeeeecCcCcccCc
Confidence            999999999999999999999999999999998877666655555544 455 899999999999999999999999999


Q ss_pred             EEEecCceee
Q 024145          250 NLVVDGGFSV  259 (272)
Q Consensus       250 ~i~~dgG~~~  259 (272)
                      ++.++||++.
T Consensus       235 tlpveGGfs~  244 (245)
T KOG1207|consen  235 TLPVEGGFSN  244 (245)
T ss_pred             eeeecCCccC
Confidence            9999999985

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=100.00  E-value=2.8e-40  Score=277.90  Aligned_cols=244  Identities=30%  Similarity=0.440  Sum_probs=213.3

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGK   89 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (272)
                      |.++++|+++||||+++||++++++|+++|+.|++.+|+.+..+++.+..+.++.++.+|+++.++++++++++.+++++
T Consensus         1 ~~~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (245)
T PRK12936          1 MFDLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEG   80 (245)
T ss_pred             CcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            34678999999999999999999999999999999999887777776666677889999999999999999999999999


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHH
Q 024145           90 LDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYG  169 (272)
Q Consensus        90 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a  169 (272)
                      +|++|||+|....  .++.+.+.+++++.+++|+.+++.+++++.+.+.+++.++||++||..+..+.+.+..|+.+|++
T Consensus        81 id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sk~a  158 (245)
T PRK12936         81 VDILVNNAGITKD--GLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNPGQANYCASKAG  158 (245)
T ss_pred             CCEEEECCCCCCC--CccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCCCCcchHHHHHH
Confidence            9999999998654  56778888999999999999999999999998877678899999999998888999999999999


Q ss_pred             HHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCcccc
Q 024145          170 ILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQ  249 (272)
Q Consensus       170 ~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  249 (272)
                      +..+++.++.++.+.|+++++++||+++|++....   .+...+......+. +++.+|+|+++++.|++++...+++|+
T Consensus       159 ~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~ia~~~~~l~~~~~~~~~G~  234 (245)
T PRK12936        159 MIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKL---NDKQKEAIMGAIPM-KRMGTGAEVASAVAYLASSEAAYVTGQ  234 (245)
T ss_pred             HHHHHHHHHHHhhHhCeEEEEEEECcCcCchhccc---ChHHHHHHhcCCCC-CCCcCHHHHHHHHHHHcCccccCcCCC
Confidence            99999999999999999999999999999986531   12222222223333 678899999999999999888899999


Q ss_pred             EEEecCceee
Q 024145          250 NLVVDGGFSV  259 (272)
Q Consensus       250 ~i~~dgG~~~  259 (272)
                      ++.+|||...
T Consensus       235 ~~~~~~g~~~  244 (245)
T PRK12936        235 TIHVNGGMAM  244 (245)
T ss_pred             EEEECCCccc
Confidence            9999999764

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=100.00  E-value=5.6e-40  Score=276.53  Aligned_cols=240  Identities=25%  Similarity=0.375  Sum_probs=205.9

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEee-cCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGAKVVIAD-VQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~~V~~~~-r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      |++|+++||||++|||++++++|+++|++|++.. ++....++..+++   +.++..+.+|++|.++++++++++.+.++
T Consensus         1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (246)
T PRK12938          1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVG   80 (246)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            4689999999999999999999999999988754 4444444444333   45788889999999999999999999999


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHH
Q 024145           89 KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKY  168 (272)
Q Consensus        89 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~  168 (272)
                      ++|++|||+|....  .++.+.+.+++++++++|+.+++.+++++.++|.+++.++||++||..+..+.+++..|+++|+
T Consensus        81 ~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sK~  158 (246)
T PRK12938         81 EIDVLVNNAGITRD--VVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKA  158 (246)
T ss_pred             CCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCCCCChhHHHHHH
Confidence            99999999998654  5678889999999999999999999999999998777799999999998888889999999999


Q ss_pred             HHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccc
Q 024145          169 GILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSG  248 (272)
Q Consensus       169 a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  248 (272)
                      +++.++++++.|+.++||++++|+||+++||+.+..  .++.. +......++ .++.+|+|+++.+.||+++...+++|
T Consensus       159 a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~--~~~~~-~~~~~~~~~-~~~~~~~~v~~~~~~l~~~~~~~~~g  234 (246)
T PRK12938        159 GIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAI--RPDVL-EKIVATIPV-RRLGSPDEIGSIVAWLASEESGFSTG  234 (246)
T ss_pred             HHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhc--ChHHH-HHHHhcCCc-cCCcCHHHHHHHHHHHcCcccCCccC
Confidence            999999999999999999999999999999987632  22222 222222333 67899999999999999998899999


Q ss_pred             cEEEecCcee
Q 024145          249 QNLVVDGGFS  258 (272)
Q Consensus       249 ~~i~~dgG~~  258 (272)
                      +.+.+|||..
T Consensus       235 ~~~~~~~g~~  244 (246)
T PRK12938        235 ADFSLNGGLH  244 (246)
T ss_pred             cEEEECCccc
Confidence            9999999964

>PRK06949 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.4e-40  Score=278.00  Aligned_cols=243  Identities=27%  Similarity=0.403  Sum_probs=211.3

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (272)
                      ..++++|+++||||++|||++++++|+++|++|++++|+++..+++.+++   +.++.++.+|+++.++++++++++.+.
T Consensus         4 ~~~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (258)
T PRK06949          4 SINLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETE   83 (258)
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHh
Confidence            34578999999999999999999999999999999999988776665543   457889999999999999999999999


Q ss_pred             hCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCC--------CceEEEEecccccccCC
Q 024145           87 FGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ--------KGCILFTASACTEIAGL  158 (272)
Q Consensus        87 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--------~g~iv~iss~~~~~~~~  158 (272)
                      ++++|++|||+|....  .++.+.+.++++.++++|+.+++.+++++.+.|.++.        .+++|++||..+..+.+
T Consensus        84 ~~~~d~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~  161 (258)
T PRK06949         84 AGTIDILVNNSGVSTT--QKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLP  161 (258)
T ss_pred             cCCCCEEEECCCCCCC--CCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCCC
Confidence            9999999999998654  5677788999999999999999999999999986543        47999999998888888


Q ss_pred             CCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHH
Q 024145          159 GSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYL  238 (272)
Q Consensus       159 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  238 (272)
                      ....|+++|++++.+++.++.++.++||++++|+||+++|++......  ......+....+. +++.+|+|+++.+.||
T Consensus       162 ~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~--~~~~~~~~~~~~~-~~~~~p~~~~~~~~~l  238 (258)
T PRK06949        162 QIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWE--TEQGQKLVSMLPR-KRVGKPEDLDGLLLLL  238 (258)
T ss_pred             CccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccC--hHHHHHHHhcCCC-CCCcCHHHHHHHHHHH
Confidence            889999999999999999999999999999999999999998763211  1222233344444 7899999999999999


Q ss_pred             hcCCCCCccccEEEecCce
Q 024145          239 ASDESSYVSGQNLVVDGGF  257 (272)
Q Consensus       239 ~s~~~~~~~G~~i~~dgG~  257 (272)
                      +++.+.+++|+.|.+|||+
T Consensus       239 ~~~~~~~~~G~~i~~dgg~  257 (258)
T PRK06949        239 AADESQFINGAIISADDGF  257 (258)
T ss_pred             hChhhcCCCCcEEEeCCCC
Confidence            9999999999999999996

>PRK06057 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.7e-40  Score=277.03  Aligned_cols=244  Identities=36%  Similarity=0.551  Sum_probs=207.7

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      .+++||+++||||++|||++++++|+++|++|++++|+....++..++++.  .++++|++++++++++++++.+.++++
T Consensus         3 ~~~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~--~~~~~D~~~~~~~~~~~~~~~~~~~~i   80 (255)
T PRK06057          3 QRLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGG--LFVPTDVTDEDAVNALFDTAAETYGSV   80 (255)
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC--cEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence            347899999999999999999999999999999999987776666555543  578999999999999999999988999


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccC-CCCchhhhhHHH
Q 024145           91 DIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAG-LGSPAYTISKYG  169 (272)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~-~~~~~Y~~sK~a  169 (272)
                      |++|||+|...+...++.+.+.+.+++.+++|+.+++.+++.++++|.+++.|+||++||..+..+. +++..|+.+|++
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~~~~~~Y~~sKaa  160 (255)
T PRK06057         81 DIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSATSQISYTASKGG  160 (255)
T ss_pred             CEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCCCCCcchHHHHHH
Confidence            9999999976532245677889999999999999999999999999987778999999998776665 467889999999


Q ss_pred             HHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCC-ChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccc
Q 024145          170 ILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGV-DPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSG  248 (272)
Q Consensus       170 ~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  248 (272)
                      ++.+++.++.++.++||++++|+||+++|++...... ..+...+... ..+. +++.+|+|+++++.+|+++...+++|
T Consensus       161 l~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~a~~~~~l~~~~~~~~~g  238 (255)
T PRK06057        161 VLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKDPERAARRLV-HVPM-GRFAEPEEIAAAVAFLASDDASFITA  238 (255)
T ss_pred             HHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCCHHHHHHHHh-cCCC-CCCcCHHHHHHHHHHHhCccccCccC
Confidence            9999999999999999999999999999998653221 1222222222 2233 68899999999999999999999999


Q ss_pred             cEEEecCcee
Q 024145          249 QNLVVDGGFS  258 (272)
Q Consensus       249 ~~i~~dgG~~  258 (272)
                      +.+.+|||..
T Consensus       239 ~~~~~~~g~~  248 (255)
T PRK06057        239 STFLVDGGIS  248 (255)
T ss_pred             cEEEECCCee
Confidence            9999999976

>PRK12939 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-39  Score=274.92  Aligned_cols=244  Identities=32%  Similarity=0.410  Sum_probs=213.5

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      ..+++|+++||||+++||++++++|+++|++|++++|+++..++..+++   +.++.++.+|++++++++++++++.+.+
T Consensus         3 ~~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   82 (250)
T PRK12939          3 SNLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAAL   82 (250)
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            4578999999999999999999999999999999999887766665544   4578999999999999999999999999


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhH
Q 024145           88 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISK  167 (272)
Q Consensus        88 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK  167 (272)
                      +++|++|||+|....  .++.+.+.+++++.+++|+.+++.+++.+.+.|.+++.|++|++||..+..+.+....|+.+|
T Consensus        83 ~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK  160 (250)
T PRK12939         83 GGLDGLVNNAGITNS--KSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAPKLGAYVASK  160 (250)
T ss_pred             CCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCCCcchHHHHH
Confidence            999999999998765  667788999999999999999999999999999887789999999999888888889999999


Q ss_pred             HHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCcc
Q 024145          168 YGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVS  247 (272)
Q Consensus       168 ~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  247 (272)
                      ++++.+++.++.++.+++|+++.|+||+++|++.+....  ...........+. +++.+|+|+++++++++++...+++
T Consensus       161 ~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~~~~~~~~~  237 (250)
T PRK12939        161 GAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPA--DERHAYYLKGRAL-ERLQVPDDVAGAVLFLLSDAARFVT  237 (250)
T ss_pred             HHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCC--hHHHHHHHhcCCC-CCCCCHHHHHHHHHHHhCccccCcc
Confidence            999999999999999999999999999999998764221  1222223333344 7889999999999999998888999


Q ss_pred             ccEEEecCceee
Q 024145          248 GQNLVVDGGFSV  259 (272)
Q Consensus       248 G~~i~~dgG~~~  259 (272)
                      |+.|.+|||..+
T Consensus       238 G~~i~~~gg~~~  249 (250)
T PRK12939        238 GQLLPVNGGFVM  249 (250)
T ss_pred             CcEEEECCCccc
Confidence            999999999765

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=4.6e-40  Score=305.43  Aligned_cols=248  Identities=35%  Similarity=0.522  Sum_probs=215.3

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   91 (272)
                      .++||++|||||++|||++++++|+++|++|++++|+.+..++..++++.++.++++|++++++++++++++.++++++|
T Consensus         2 ~~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD   81 (520)
T PRK06484          2 KAQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRID   81 (520)
T ss_pred             CCCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCC
Confidence            35789999999999999999999999999999999998888888888877888999999999999999999999999999


Q ss_pred             EEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCc-eEEEEecccccccCCCCchhhhhHHHH
Q 024145           92 IMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKG-CILFTASACTEIAGLGSPAYTISKYGI  170 (272)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g-~iv~iss~~~~~~~~~~~~Y~~sK~a~  170 (272)
                      +||||||...+...++.+.+.++|++++++|+.+++.++++++|+|.+++.| +||++||..+..+.+++..|+++|+|+
T Consensus        82 ~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~~~~~Y~asKaal  161 (520)
T PRK06484         82 VLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPKRTAYSASKAAV  161 (520)
T ss_pred             EEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCCCCchHHHHHHHH
Confidence            9999999754322567788999999999999999999999999999776655 999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccccE
Q 024145          171 LGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQN  250 (272)
Q Consensus       171 ~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~  250 (272)
                      ++|+++++.|+.++||+|++|+||+++|++...................+. +++.+|+|+++.+.|++++...+++|++
T Consensus       162 ~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~va~~v~~l~~~~~~~~~G~~  240 (520)
T PRK06484        162 ISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRSRIPL-GRLGRPEEIAEAVFFLASDQASYITGST  240 (520)
T ss_pred             HHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccchhhhHHHHhcCCC-CCCcCHHHHHHHHHHHhCccccCccCce
Confidence            999999999999999999999999999998753211111111112222333 6788999999999999999999999999


Q ss_pred             EEecCceeec
Q 024145          251 LVVDGGFSVV  260 (272)
Q Consensus       251 i~~dgG~~~~  260 (272)
                      +.+|||....
T Consensus       241 ~~~~gg~~~~  250 (520)
T PRK06484        241 LVVDGGWTVY  250 (520)
T ss_pred             EEecCCeecc
Confidence            9999998754

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1e-39  Score=275.52  Aligned_cols=244  Identities=25%  Similarity=0.351  Sum_probs=209.4

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCeEEE-eecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGAKVVI-ADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~~V~~-~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      +.+|++|||||++|||++++++|+++|++|++ ..|+.+..+++.+++   +.++.++.+|++|+++++++++++.+.++
T Consensus         2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (250)
T PRK08063          2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFG   81 (250)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            56899999999999999999999999999876 477766665555443   56789999999999999999999999999


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHH
Q 024145           89 KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKY  168 (272)
Q Consensus        89 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~  168 (272)
                      ++|+||||+|....  .++.+.+.++++..+++|+.+++.++++++++|.+++.|+||++||..+..+.+....|++||+
T Consensus        82 ~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~  159 (250)
T PRK08063         82 RLDVFVNNAASGVL--RPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYLENYTTVGVSKA  159 (250)
T ss_pred             CCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCccHHHHHHH
Confidence            99999999997654  6778889999999999999999999999999998888899999999988888888899999999


Q ss_pred             HHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccc
Q 024145          169 GILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSG  248 (272)
Q Consensus       169 a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  248 (272)
                      ++++|+++++.++.+.||++++|+||+++|++...... ............+. +++.+++|+++.+.+++++...+++|
T Consensus       160 a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~dva~~~~~~~~~~~~~~~g  237 (250)
T PRK08063        160 ALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPN-REELLEDARAKTPA-GRMVEPEDVANAVLFLCSPEADMIRG  237 (250)
T ss_pred             HHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccC-chHHHHHHhcCCCC-CCCcCHHHHHHHHHHHcCchhcCccC
Confidence            99999999999999999999999999999998653211 12222222222333 67899999999999999888888999


Q ss_pred             cEEEecCceeec
Q 024145          249 QNLVVDGGFSVV  260 (272)
Q Consensus       249 ~~i~~dgG~~~~  260 (272)
                      +++.+|||..+.
T Consensus       238 ~~~~~~gg~~~~  249 (250)
T PRK08063        238 QTIIVDGGRSLL  249 (250)
T ss_pred             CEEEECCCeeee
Confidence            999999998753

>PRK05872 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.2e-40  Score=284.35  Aligned_cols=240  Identities=25%  Similarity=0.363  Sum_probs=206.7

Q ss_pred             ccCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhC--CceEEEEecCCCHHHHHHHHHHHHH
Q 024145            8 APFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLG--QDVCYIHCDISNEDEVINLVDTAVS   85 (272)
Q Consensus         8 ~~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~   85 (272)
                      +++.+++||++|||||++|||++++++|+++|++|++++|+.+..+++.++++  ..+..+.+|++|.++++++++++.+
T Consensus         2 ~~~~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   81 (296)
T PRK05872          2 PPMTSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVE   81 (296)
T ss_pred             CCCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            34567899999999999999999999999999999999999888887777774  3566777999999999999999999


Q ss_pred             HhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhh
Q 024145           86 KFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTI  165 (272)
Q Consensus        86 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~  165 (272)
                      +++++|++|||+|+...  .++.+.+.++|++++++|+.+++.+++.++|+|.++ .|+||++||..+..+.+++..|++
T Consensus        82 ~~g~id~vI~nAG~~~~--~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~a  158 (296)
T PRK05872         82 RFGGIDVVVANAGIASG--GSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIER-RGYVLQVSSLAAFAAAPGMAAYCA  158 (296)
T ss_pred             HcCCCCEEEECCCcCCC--cCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCEEEEEeCHhhcCCCCCchHHHH
Confidence            99999999999998764  778899999999999999999999999999999764 589999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCC
Q 024145          166 SKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSY  245 (272)
Q Consensus       166 sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  245 (272)
                      ||+++++|+++++.|+.++||++++++||+++|++.+......+...........+.++..+|+|+++.+++++++...+
T Consensus       159 sKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~i~~~~~~~~~~  238 (296)
T PRK05872        159 SKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADADLPAFRELRARLPWPLRRTTSVEKCAAAFVDGIERRARR  238 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhccccchhHHHHHhhCCCcccCCCCHHHHHHHHHHHHhcCCCE
Confidence            99999999999999999999999999999999998764322212222222222223368889999999999999988877


Q ss_pred             ccccE
Q 024145          246 VSGQN  250 (272)
Q Consensus       246 ~~G~~  250 (272)
                      +++..
T Consensus       239 i~~~~  243 (296)
T PRK05872        239 VYAPR  243 (296)
T ss_pred             EEchH
Confidence            77664

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=7.7e-40  Score=277.84  Aligned_cols=242  Identities=28%  Similarity=0.437  Sum_probs=206.9

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh----C-CceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL----G-QDVCYIHCDISNEDEVINLVDTAVSKFGK   89 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (272)
                      +|++|||||+++||++++++|+++|++|++++|+....+...+++    + .++.++.+|+++.++++++++++.+.+++
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   81 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR   81 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            689999999999999999999999999999999877666555443    2 46899999999999999999999999999


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCC-CceEEEEecccccccCCCCchhhhhHH
Q 024145           90 LDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ-KGCILFTASACTEIAGLGSPAYTISKY  168 (272)
Q Consensus        90 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~Y~~sK~  168 (272)
                      +|++|||+|....  .++.+.+.++|++.+++|+.+++.+++++.+.|.+++ .++||++||..+..+.+....|++||+
T Consensus        82 id~vv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sKa  159 (259)
T PRK12384         82 VDLLVYNAGIAKA--AFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKF  159 (259)
T ss_pred             CCEEEECCCcCCC--CCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCCCCchhHHHHH
Confidence            9999999998765  6778899999999999999999999999999998765 689999999988888888899999999


Q ss_pred             HHHHHHHHHHHHhcCCCcEEEEEeCCcc-cCCcccCCC--------CChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHh
Q 024145          169 GILGLVKCLAAELGQYGIRVNCVSPYGL-ATGMSMKGG--------VDPALIESSMSQMGNLKGEFLKTDGIANAALYLA  239 (272)
Q Consensus       169 a~~~~~~~la~e~~~~gi~v~~i~Pg~v-~t~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  239 (272)
                      |+++++++++.|++++||++++|+||++ .|++.....        ...++..+......++ +++.+|+|+++++++|+
T Consensus       160 a~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dv~~~~~~l~  238 (259)
T PRK12384        160 GGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPL-KRGCDYQDVLNMLLFYA  238 (259)
T ss_pred             HHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhCcc-cCCCCHHHHHHHHHHHc
Confidence            9999999999999999999999999975 666543210        0112222222233344 78999999999999999


Q ss_pred             cCCCCCccccEEEecCceee
Q 024145          240 SDESSYVSGQNLVVDGGFSV  259 (272)
Q Consensus       240 s~~~~~~~G~~i~~dgG~~~  259 (272)
                      ++...+++|++|.+|||...
T Consensus       239 ~~~~~~~~G~~~~v~~g~~~  258 (259)
T PRK12384        239 SPKASYCTGQSINVTGGQVM  258 (259)
T ss_pred             CcccccccCceEEEcCCEEe
Confidence            98888999999999999864

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=100.00  E-value=8.2e-40  Score=276.41  Aligned_cols=240  Identities=32%  Similarity=0.424  Sum_probs=207.9

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      .++++|++|||||+++||++++++|+++|++|++++|+.      ....+.++.++++|++++++++++++++.++++++
T Consensus         4 ~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   77 (252)
T PRK08220          4 MDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF------LTQEDYPFATFVLDVSDAAAVAQVCQRLLAETGPL   77 (252)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch------hhhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            457899999999999999999999999999999999876      22335678899999999999999999999999999


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHH
Q 024145           91 DIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGI  170 (272)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~  170 (272)
                      |++|||+|....  .++.+.+.+++++.+++|+.+++.+++++.++|.+++.|+||++||..+..+.++...|+.||+++
T Consensus        78 d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~  155 (252)
T PRK08220         78 DVLVNAAGILRM--GATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPRIGMAAYGASKAAL  155 (252)
T ss_pred             CEEEECCCcCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCCCchhHHHHHHH
Confidence            999999998655  677888999999999999999999999999999887789999999999888888899999999999


Q ss_pred             HHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChh----HH---HHHHhhcCCCCCCCCChHhHHHHHHHHhcCCC
Q 024145          171 LGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPA----LI---ESSMSQMGNLKGEFLKTDGIANAALYLASDES  243 (272)
Q Consensus       171 ~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~----~~---~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  243 (272)
                      +.++++++.|+.++||++++++||+++|++.........    ..   .+......+. +++.+|+|+|+++++|+++..
T Consensus       156 ~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~~~~~  234 (252)
T PRK08220        156 TSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPL-GKIARPQEIANAVLFLASDLA  234 (252)
T ss_pred             HHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhhcCCC-cccCCHHHHHHHHHHHhcchh
Confidence            999999999999999999999999999998643211110    00   1112222333 788999999999999999989


Q ss_pred             CCccccEEEecCceee
Q 024145          244 SYVSGQNLVVDGGFSV  259 (272)
Q Consensus       244 ~~~~G~~i~~dgG~~~  259 (272)
                      .+++|+++.+|||..+
T Consensus       235 ~~~~g~~i~~~gg~~~  250 (252)
T PRK08220        235 SHITLQDIVVDGGATL  250 (252)
T ss_pred             cCccCcEEEECCCeec
Confidence            9999999999999765

>PRK06701 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-39  Score=279.33  Aligned_cols=244  Identities=30%  Similarity=0.388  Sum_probs=208.0

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcch-HHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHH
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKL-GEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVS   85 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~-~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (272)
                      +.++++|++|||||++|||++++++|+++|++|++++|+... .+...+.+   +.++.++.+|+++.++++++++++.+
T Consensus        41 ~~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~  120 (290)
T PRK06701         41 SGKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVR  120 (290)
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            457889999999999999999999999999999999987542 33333333   45788999999999999999999999


Q ss_pred             HhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhh
Q 024145           86 KFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTI  165 (272)
Q Consensus        86 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~  165 (272)
                      .++++|++|||||..... ..+.+.+.++|.+.+++|+.+++.+++++++.|.+  .++||++||..+..+.+.+..|++
T Consensus       121 ~~~~iD~lI~~Ag~~~~~-~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~--~g~iV~isS~~~~~~~~~~~~Y~~  197 (290)
T PRK06701        121 ELGRLDILVNNAAFQYPQ-QSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQ--GSAIINTGSITGYEGNETLIDYSA  197 (290)
T ss_pred             HcCCCCEEEECCcccCCC-CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhh--CCeEEEEecccccCCCCCcchhHH
Confidence            999999999999976432 46778899999999999999999999999999853  489999999999888888999999


Q ss_pred             hHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCC
Q 024145          166 SKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSY  245 (272)
Q Consensus       166 sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  245 (272)
                      ||+|++.++++++.++.++||++++|+||+++|++..... ..+.... +....+. +++.+|+|+++++++++++.+.+
T Consensus       198 sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~-~~~~~~~-~~~~~~~-~~~~~~~dva~~~~~ll~~~~~~  274 (290)
T PRK06701        198 TKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDF-DEEKVSQ-FGSNTPM-QRPGQPEELAPAYVFLASPDSSY  274 (290)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCccccccc-CHHHHHH-HHhcCCc-CCCcCHHHHHHHHHHHcCcccCC
Confidence            9999999999999999999999999999999999875321 1222222 2233333 78899999999999999999999


Q ss_pred             ccccEEEecCceee
Q 024145          246 VSGQNLVVDGGFSV  259 (272)
Q Consensus       246 ~~G~~i~~dgG~~~  259 (272)
                      ++|++|.+|||...
T Consensus       275 ~~G~~i~idgg~~~  288 (290)
T PRK06701        275 ITGQMLHVNGGVIV  288 (290)
T ss_pred             ccCcEEEeCCCccc
Confidence            99999999999754

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.5e-39  Score=274.50  Aligned_cols=246  Identities=37%  Similarity=0.519  Sum_probs=212.8

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhC--CceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLG--QDVCYIHCDISNEDEVINLVDTAVSKFGK   89 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (272)
                      ++++|++|||||+|+||++++++|+++|++|++++|++...++..+.+.  .++.++.+|++++++++++++++.+++++
T Consensus         2 ~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (251)
T PRK07231          2 RLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGS   81 (251)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            4788999999999999999999999999999999999887776665553  56889999999999999999999999999


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHH
Q 024145           90 LDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYG  169 (272)
Q Consensus        90 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a  169 (272)
                      +|++|||+|..... .++.+.+.+++++.+++|+.+++.+++.+++.|.+++.++||++||..+..+.++...|+.+|++
T Consensus        82 ~d~vi~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sk~~  160 (251)
T PRK07231         82 VDILVNNAGTTHRN-GPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRPGLGWYNASKGA  160 (251)
T ss_pred             CCEEEECCCCCCCC-CChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCCCchHHHHHHHH
Confidence            99999999975432 45778889999999999999999999999999988778999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCC-hhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccc
Q 024145          170 ILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVD-PALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSG  248 (272)
Q Consensus       170 ~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  248 (272)
                      ++.+++.++.+++++||++++++||+++|++....... .+.....+....+. +++.+|+|+++++++++++...+++|
T Consensus       161 ~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~~~~~~~~~g  239 (251)
T PRK07231        161 VITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLATIPL-GRLGTPEDIANAALFLASDEASWITG  239 (251)
T ss_pred             HHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhcCCCC-CCCcCHHHHHHHHHHHhCccccCCCC
Confidence            99999999999998899999999999999986642211 11222222233333 78899999999999999988889999


Q ss_pred             cEEEecCceee
Q 024145          249 QNLVVDGGFSV  259 (272)
Q Consensus       249 ~~i~~dgG~~~  259 (272)
                      +.+.+|||..+
T Consensus       240 ~~~~~~gg~~~  250 (251)
T PRK07231        240 VTLVVDGGRCV  250 (251)
T ss_pred             CeEEECCCccC
Confidence            99999999754

>PRK07576 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-39  Score=277.32  Aligned_cols=245  Identities=25%  Similarity=0.329  Sum_probs=208.5

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (272)
                      ++++++|++|||||++|||++++++|+++|++|++++|+.+..++..+++   +.++.++.+|++++++++++++++.+.
T Consensus         4 ~~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~   83 (264)
T PRK07576          4 MFDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADE   83 (264)
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999877665554433   456788999999999999999999999


Q ss_pred             hCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhh
Q 024145           87 FGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTIS  166 (272)
Q Consensus        87 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~s  166 (272)
                      ++++|++|||+|....  .++.+.+.+++++.+++|+.+++.++++++++|.++ .|+||++||..+..+.+++..|+++
T Consensus        84 ~~~iD~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~-~g~iv~iss~~~~~~~~~~~~Y~as  160 (264)
T PRK07576         84 FGPIDVLVSGAAGNFP--APAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRP-GASIIQISAPQAFVPMPMQAHVCAA  160 (264)
T ss_pred             cCCCCEEEECCCCCCC--CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCEEEEECChhhccCCCCccHHHHH
Confidence            9999999999997644  567788999999999999999999999999998654 5899999999888888899999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEEeCCccc-CCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCC
Q 024145          167 KYGILGLVKCLAAELGQYGIRVNCVSPYGLA-TGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSY  245 (272)
Q Consensus       167 K~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  245 (272)
                      |++++.|+++++.|+.++||+++.|+||+++ |+...... ..+..........++ ++..+|+|+++.+++++++...+
T Consensus       161 K~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~~~~~~~  238 (264)
T PRK07576        161 KAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLA-PSPELQAAVAQSVPL-KRNGTKQDIANAALFLASDMASY  238 (264)
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhcc-cCHHHHHHHHhcCCC-CCCCCHHHHHHHHHHHcChhhcC
Confidence            9999999999999999999999999999997 55332211 112222223333344 77889999999999999988889


Q ss_pred             ccccEEEecCceee
Q 024145          246 VSGQNLVVDGGFSV  259 (272)
Q Consensus       246 ~~G~~i~~dgG~~~  259 (272)
                      ++|+.+.+|||..+
T Consensus       239 ~~G~~~~~~gg~~~  252 (264)
T PRK07576        239 ITGVVLPVDGGWSL  252 (264)
T ss_pred             ccCCEEEECCCccc
Confidence            99999999999865

>PRK07890 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-39  Score=276.33  Aligned_cols=244  Identities=27%  Similarity=0.358  Sum_probs=208.5

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      .+++|++|||||++|||++++++|+++|++|++++|+++..+++.+++   +.++.++.+|++++++++.+++++.++++
T Consensus         2 ~l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (258)
T PRK07890          2 LLKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFG   81 (258)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence            367899999999999999999999999999999999887776666554   45789999999999999999999999999


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHH
Q 024145           89 KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKY  168 (272)
Q Consensus        89 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~  168 (272)
                      ++|++|||+|..... .++.+.+.+++++.+++|+.+++.+++++.+.|.+. .++||++||..+..+.+++..|+++|+
T Consensus        82 ~~d~vi~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~ii~~sS~~~~~~~~~~~~Y~~sK~  159 (258)
T PRK07890         82 RVDALVNNAFRVPSM-KPLADADFAHWRAVIELNVLGTLRLTQAFTPALAES-GGSIVMINSMVLRHSQPKYGAYKMAKG  159 (258)
T ss_pred             CccEEEECCccCCCC-CCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC-CCEEEEEechhhccCCCCcchhHHHHH
Confidence            999999999975432 567788899999999999999999999999998764 479999999999888899999999999


Q ss_pred             HHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCC--------CChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhc
Q 024145          169 GILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGG--------VDPALIESSMSQMGNLKGEFLKTDGIANAALYLAS  240 (272)
Q Consensus       169 a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  240 (272)
                      +++.++++++.|++++||++++++||++.|++.....        ...+..........+. +++.+|+|++++++++++
T Consensus       160 a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~a~~~l~~  238 (258)
T PRK07890        160 ALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDL-KRLPTDDEVASAVLFLAS  238 (258)
T ss_pred             HHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhcCCc-cccCCHHHHHHHHHHHcC
Confidence            9999999999999999999999999999999754210        0111222222222333 678899999999999999


Q ss_pred             CCCCCccccEEEecCcee
Q 024145          241 DESSYVSGQNLVVDGGFS  258 (272)
Q Consensus       241 ~~~~~~~G~~i~~dgG~~  258 (272)
                      +...+++|+++.+|||..
T Consensus       239 ~~~~~~~G~~i~~~gg~~  256 (258)
T PRK07890        239 DLARAITGQTLDVNCGEY  256 (258)
T ss_pred             HhhhCccCcEEEeCCccc
Confidence            888899999999999964

>PRK12742 oxidoreductase; Provisional

Probab=100.00  E-value=2.3e-39  Score=271.20  Aligned_cols=233  Identities=30%  Similarity=0.476  Sum_probs=195.1

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeec-CcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADV-QDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGK   89 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (272)
                      .++++|++|||||++|||++++++|+++|++|+++.+ +.+..+++.++.+  +.++.+|++|.+++.++++    ++++
T Consensus         2 ~~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~--~~~~~~D~~~~~~~~~~~~----~~~~   75 (237)
T PRK12742          2 GAFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETG--ATAVQTDSADRDAVIDVVR----KSGA   75 (237)
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhC--CeEEecCCCCHHHHHHHHH----HhCC
Confidence            3578999999999999999999999999999988765 4444555544443  5678899999998877664    3578


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccccc-ccCCCCchhhhhHH
Q 024145           90 LDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTE-IAGLGSPAYTISKY  168 (272)
Q Consensus        90 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~-~~~~~~~~Y~~sK~  168 (272)
                      +|++|||+|....  .+..+.+.++|++.+++|+.+++.+++.+.++|.  +.|++|++||..+. .+.++...|+.+|+
T Consensus        76 id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~g~iv~isS~~~~~~~~~~~~~Y~~sKa  151 (237)
T PRK12742         76 LDILVVNAGIAVF--GDALELDADDIDRLFKINIHAPYHASVEAARQMP--EGGRIIIIGSVNGDRMPVAGMAAYAASKS  151 (237)
T ss_pred             CcEEEECCCCCCC--CCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHh--cCCeEEEEeccccccCCCCCCcchHHhHH
Confidence            9999999998654  5667788999999999999999999999999985  35899999998874 56788899999999


Q ss_pred             HHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccc
Q 024145          169 GILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSG  248 (272)
Q Consensus       169 a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  248 (272)
                      +++.+++.++.++.++||+||+|+||+++|++....   .+ ..+......++ +++.+|+|+++.+.||+++.+.+++|
T Consensus       152 a~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~---~~-~~~~~~~~~~~-~~~~~p~~~a~~~~~l~s~~~~~~~G  226 (237)
T PRK12742        152 ALQGMARGLARDFGPRGITINVVQPGPIDTDANPAN---GP-MKDMMHSFMAI-KRHGRPEEVAGMVAWLAGPEASFVTG  226 (237)
T ss_pred             HHHHHHHHHHHHHhhhCeEEEEEecCcccCCccccc---cH-HHHHHHhcCCC-CCCCCHHHHHHHHHHHcCcccCcccC
Confidence            999999999999999999999999999999986531   11 12222333344 78899999999999999999999999


Q ss_pred             cEEEecCcee
Q 024145          249 QNLVVDGGFS  258 (272)
Q Consensus       249 ~~i~~dgG~~  258 (272)
                      +++.+|||+.
T Consensus       227 ~~~~~dgg~~  236 (237)
T PRK12742        227 AMHTIDGAFG  236 (237)
T ss_pred             CEEEeCCCcC
Confidence            9999999974

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=3.6e-39  Score=273.77  Aligned_cols=244  Identities=34%  Similarity=0.490  Sum_probs=208.8

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (272)
                      ..++++|++|||||+++||.+++++|+++|++|++++|+.+..+...+.+   +.++.++.+|++|+++++++++++.+.
T Consensus         7 ~~~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~   86 (259)
T PRK08213          7 LFDLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLER   86 (259)
T ss_pred             hhCcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            56688999999999999999999999999999999999887666555444   457889999999999999999999999


Q ss_pred             hCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHh-hcCCCCceEEEEecccccccCCC----Cc
Q 024145           87 FGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARV-MVPQQKGCILFTASACTEIAGLG----SP  161 (272)
Q Consensus        87 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~g~iv~iss~~~~~~~~~----~~  161 (272)
                      ++++|++|||+|....  .+..+.+.+.|++.+++|+.+++.+++++.++ |.+++.+++|++||..+..+.+.    +.
T Consensus        87 ~~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~~~~~~  164 (259)
T PRK08213         87 FGHVDILVNNAGATWG--APAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDTI  164 (259)
T ss_pred             hCCCCEEEECCCCCCC--CChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCccccCcc
Confidence            9999999999997654  56777889999999999999999999999998 76666789999999877665543    48


Q ss_pred             hhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcC
Q 024145          162 AYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASD  241 (272)
Q Consensus       162 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  241 (272)
                      .|+.+|++++.++++++.++.++||+++.++||+++|++....  .+.. .+.+....+. .++.+|+|+++.+.+++++
T Consensus       165 ~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~--~~~~-~~~~~~~~~~-~~~~~~~~va~~~~~l~~~  240 (259)
T PRK08213        165 AYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGT--LERL-GEDLLAHTPL-GRLGDDEDLKGAALLLASD  240 (259)
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhh--hHHH-HHHHHhcCCC-CCCcCHHHHHHHHHHHhCc
Confidence            9999999999999999999999999999999999999986531  1222 2223333344 6788999999999999999


Q ss_pred             CCCCccccEEEecCceee
Q 024145          242 ESSYVSGQNLVVDGGFSV  259 (272)
Q Consensus       242 ~~~~~~G~~i~~dgG~~~  259 (272)
                      .+.+++|+.+.+|||..+
T Consensus       241 ~~~~~~G~~~~~~~~~~~  258 (259)
T PRK08213        241 ASKHITGQILAVDGGVSA  258 (259)
T ss_pred             cccCccCCEEEECCCeec
Confidence            999999999999999754

>PRK08628 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-39  Score=275.10  Aligned_cols=245  Identities=28%  Similarity=0.375  Sum_probs=205.2

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      .+++||++|||||++|||++++++|+++|++|++++|+++.. +..+++   +.++.++.+|++++++++++++++.+.+
T Consensus         3 ~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (258)
T PRK08628          3 LNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKF   81 (258)
T ss_pred             CCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence            458999999999999999999999999999999999987655 343333   5578999999999999999999999999


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhH
Q 024145           88 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISK  167 (272)
Q Consensus        88 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK  167 (272)
                      +++|++|||+|....  ..+.... ++|++.+++|+.+++.+++.+.+.+.++ .++|+++||..+..+.+.+..|++||
T Consensus        82 ~~id~vi~~ag~~~~--~~~~~~~-~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~~~~~~~Y~~sK  157 (258)
T PRK08628         82 GRIDGLVNNAGVNDG--VGLEAGR-EAFVASLERNLIHYYVMAHYCLPHLKAS-RGAIVNISSKTALTGQGGTSGYAAAK  157 (258)
T ss_pred             CCCCEEEECCcccCC--CcccCCH-HHHHHHHhhhhHHHHHHHHHHHHHhhcc-CcEEEEECCHHhccCCCCCchhHHHH
Confidence            999999999997543  3344444 9999999999999999999999988754 58999999999998888999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCC---CCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCC
Q 024145          168 YGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKG---GVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESS  244 (272)
Q Consensus       168 ~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  244 (272)
                      ++++.++++++.|+.++||+++.|+||+++|++....   ...............+...++.+|+|+++.+++++++.+.
T Consensus       158 ~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~  237 (258)
T PRK08628        158 GAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIPLGHRMTTAEEIADTAVFLLSERSS  237 (258)
T ss_pred             HHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhcCCccccCCCHHHHHHHHHHHhChhhc
Confidence            9999999999999999999999999999999975421   0111111111222223324788999999999999999889


Q ss_pred             CccccEEEecCceeec
Q 024145          245 YVSGQNLVVDGGFSVV  260 (272)
Q Consensus       245 ~~~G~~i~~dgG~~~~  260 (272)
                      +++|+.+.+|||.+..
T Consensus       238 ~~~g~~~~~~gg~~~~  253 (258)
T PRK08628        238 HTTGQWLFVDGGYVHL  253 (258)
T ss_pred             cccCceEEecCCcccc
Confidence            9999999999998765

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.5e-39  Score=273.48  Aligned_cols=238  Identities=24%  Similarity=0.276  Sum_probs=203.7

Q ss_pred             CCCCcEEEEeCCCC--hHHHHHHHHHHHcCCeEEEeecCc-----------chHHHHHH---HhCCceEEEEecCCCHHH
Q 024145           12 RLEGKVAIITGGAS--GIGAMAVELFHENGAKVVIADVQD-----------KLGEDLAD---KLGQDVCYIHCDISNEDE   75 (272)
Q Consensus        12 ~l~~k~vlItGas~--giG~aia~~la~~G~~V~~~~r~~-----------~~~~~~~~---~~~~~~~~~~~D~~~~~~   75 (272)
                      ++++|++|||||++  |||++++++|+++|++|++++|++           .....+.+   ..+.++.++.+|+++.++
T Consensus         2 ~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   81 (256)
T PRK12748          2 PLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYA   81 (256)
T ss_pred             CCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence            56889999999995  999999999999999999999872           11111222   234579999999999999


Q ss_pred             HHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccc
Q 024145           76 VINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEI  155 (272)
Q Consensus        76 ~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~  155 (272)
                      ++.+++++.+.++++|++|||+|+...  .++.+.+.+++++.+++|+.+++.+++++.+.|.++..++||++||..+..
T Consensus        82 ~~~~~~~~~~~~g~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~  159 (256)
T PRK12748         82 PNRVFYAVSERLGDPSILINNAAYSTH--TRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLG  159 (256)
T ss_pred             HHHHHHHHHHhCCCCCEEEECCCcCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccC
Confidence            999999999999999999999998654  667888999999999999999999999999999777789999999998888


Q ss_pred             cCCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHH
Q 024145          156 AGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAA  235 (272)
Q Consensus       156 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  235 (272)
                      +.+++..|++||+++++++++++.|+..+||+++.++||+++|++...      ..........+. +++.+|+|+++.+
T Consensus       160 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~------~~~~~~~~~~~~-~~~~~~~~~a~~~  232 (256)
T PRK12748        160 PMPDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITE------ELKHHLVPKFPQ-GRVGEPVDAARLI  232 (256)
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCCh------hHHHhhhccCCC-CCCcCHHHHHHHH
Confidence            888889999999999999999999999999999999999999987541      111112222222 6778999999999


Q ss_pred             HHHhcCCCCCccccEEEecCcee
Q 024145          236 LYLASDESSYVSGQNLVVDGGFS  258 (272)
Q Consensus       236 ~~l~s~~~~~~~G~~i~~dgG~~  258 (272)
                      .|++++...+++|+++.+|||+.
T Consensus       233 ~~l~~~~~~~~~g~~~~~d~g~~  255 (256)
T PRK12748        233 AFLVSEEAKWITGQVIHSEGGFS  255 (256)
T ss_pred             HHHhCcccccccCCEEEecCCcc
Confidence            99999988999999999999974

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.7e-39  Score=281.10  Aligned_cols=242  Identities=30%  Similarity=0.410  Sum_probs=203.0

Q ss_pred             ccCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCc-chHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHH
Q 024145            8 APFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQD-KLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTA   83 (272)
Q Consensus         8 ~~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~-~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~   83 (272)
                      ....+++||++|||||++|||++++++|+++|++|++++++. ...++..+++   +.++.++.+|++|.++++++++++
T Consensus         5 ~~~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~   84 (306)
T PRK07792          5 TNTTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATA   84 (306)
T ss_pred             cCCcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHH
Confidence            345778999999999999999999999999999999988753 3344444443   567899999999999999999999


Q ss_pred             HHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCC-------CCceEEEEeccccccc
Q 024145           84 VSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQ-------QKGCILFTASACTEIA  156 (272)
Q Consensus        84 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-------~~g~iv~iss~~~~~~  156 (272)
                      .+ +|++|+||||||+...  ..+.+.+.++|++++++|+.+++.+++++.++|.++       ..|+||++||..+..+
T Consensus        85 ~~-~g~iD~li~nAG~~~~--~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  161 (306)
T PRK07792         85 VG-LGGLDIVVNNAGITRD--RMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVG  161 (306)
T ss_pred             HH-hCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccC
Confidence            88 9999999999998765  567888999999999999999999999999998643       2479999999999888


Q ss_pred             CCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHH
Q 024145          157 GLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAAL  236 (272)
Q Consensus       157 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  236 (272)
                      .++...|++||+|++.|++.++.|+.++||+||+|+||. .|++...........   ...   . ....+|++++..+.
T Consensus       162 ~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~-~t~~~~~~~~~~~~~---~~~---~-~~~~~pe~va~~v~  233 (306)
T PRK07792        162 PVGQANYGAAKAGITALTLSAARALGRYGVRANAICPRA-RTAMTADVFGDAPDV---EAG---G-IDPLSPEHVVPLVQ  233 (306)
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC-CCchhhhhccccchh---hhh---c-cCCCCHHHHHHHHH
Confidence            888999999999999999999999999999999999994 888754211110110   000   1 23358999999999


Q ss_pred             HHhcCCCCCccccEEEecCceeec
Q 024145          237 YLASDESSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       237 ~l~s~~~~~~~G~~i~~dgG~~~~  260 (272)
                      ||+++.+.+++|++|.+|||....
T Consensus       234 ~L~s~~~~~~tG~~~~v~gg~~~~  257 (306)
T PRK07792        234 FLASPAAAEVNGQVFIVYGPMVTL  257 (306)
T ss_pred             HHcCccccCCCCCEEEEcCCeEEE
Confidence            999998899999999999998663

>PRK06138 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.3e-39  Score=271.91  Aligned_cols=245  Identities=37%  Similarity=0.543  Sum_probs=212.7

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh--CCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL--GQDVCYIHCDISNEDEVINLVDTAVSKFGK   89 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (272)
                      ++++|++|||||+|+||++++++|+++|++|++++|+.+..++..+++  +.++.++++|++|+++++++++++.+++++
T Consensus         2 ~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   81 (252)
T PRK06138          2 RLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGR   81 (252)
T ss_pred             CCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            578999999999999999999999999999999999987766665554  456899999999999999999999999999


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHH
Q 024145           90 LDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYG  169 (272)
Q Consensus        90 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a  169 (272)
                      +|++|||+|....  ..+.+.+.+++++.+++|+.+++.+++.+++.|.+++.++|+++||..+..+.++...|+.+|++
T Consensus        82 id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK~a  159 (252)
T PRK06138         82 LDVLVNNAGFGCG--GTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGRGRAAYVASKGA  159 (252)
T ss_pred             CCEEEECCCCCCC--CCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCCccHHHHHHHH
Confidence            9999999998654  66778889999999999999999999999999988788999999999998888899999999999


Q ss_pred             HHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCC---CChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCc
Q 024145          170 ILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGG---VDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYV  246 (272)
Q Consensus       170 ~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  246 (272)
                      ++.++++++.|+.++||++++++||+++|++.....   ..++..........+. .++.+++|+++.++++++....++
T Consensus       160 ~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~a~~~~~l~~~~~~~~  238 (252)
T PRK06138        160 IASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRARHPM-NRFGTAEEVAQAALFLASDESSFA  238 (252)
T ss_pred             HHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHcCchhcCc
Confidence            999999999999999999999999999999865321   1122222222222233 568899999999999999888899


Q ss_pred             cccEEEecCceee
Q 024145          247 SGQNLVVDGGFSV  259 (272)
Q Consensus       247 ~G~~i~~dgG~~~  259 (272)
                      +|+.+.+|||.++
T Consensus       239 ~g~~~~~~~g~~~  251 (252)
T PRK06138        239 TGTTLVVDGGWLA  251 (252)
T ss_pred             cCCEEEECCCeec
Confidence            9999999999764

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.4e-39  Score=270.89  Aligned_cols=233  Identities=29%  Similarity=0.464  Sum_probs=197.8

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   91 (272)
                      ++++|+++||||++|||++++++|+++|++|++++|+....      ...++.++.+|++++      ++++.+.++++|
T Consensus         2 ~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~------~~~~~~~~~~D~~~~------~~~~~~~~~~id   69 (235)
T PRK06550          2 EFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD------LSGNFHFLQLDLSDD------LEPLFDWVPSVD   69 (235)
T ss_pred             CCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc------cCCcEEEEECChHHH------HHHHHHhhCCCC
Confidence            47899999999999999999999999999999999875431      234688999999887      445555668999


Q ss_pred             EEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHHH
Q 024145           92 IMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGIL  171 (272)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~  171 (272)
                      ++|||+|.... ..++.+.+.+++++.+++|+.+++.+++++++.+.+++.|+||++||..+..+.++...|+.+|++++
T Consensus        70 ~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  148 (235)
T PRK06550         70 ILCNTAGILDD-YKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGGGGAAYTASKHALA  148 (235)
T ss_pred             EEEECCCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcccHHHHHHHH
Confidence            99999997532 14567888999999999999999999999999998877899999999999888888999999999999


Q ss_pred             HHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccccEE
Q 024145          172 GLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNL  251 (272)
Q Consensus       172 ~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i  251 (272)
                      .++++++.|+.++||++++|+||+++|++...... ............++ +++.+|||+|++++|++++...+++|+++
T Consensus       149 ~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~a~~~~~l~s~~~~~~~g~~~  226 (235)
T PRK06550        149 GFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFE-PGGLADWVARETPI-KRWAEPEEVAELTLFLASGKADYMQGTIV  226 (235)
T ss_pred             HHHHHHHHHhhhcCeEEEEEeeCCccCcccccccC-chHHHHHHhccCCc-CCCCCHHHHHHHHHHHcChhhccCCCcEE
Confidence            99999999999999999999999999998653222 12222223333444 78899999999999999998899999999


Q ss_pred             EecCceee
Q 024145          252 VVDGGFSV  259 (272)
Q Consensus       252 ~~dgG~~~  259 (272)
                      .+|||..+
T Consensus       227 ~~~gg~~~  234 (235)
T PRK06550        227 PIDGGWTL  234 (235)
T ss_pred             EECCceec
Confidence            99999765

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=100.00  E-value=5.2e-39  Score=271.08  Aligned_cols=243  Identities=31%  Similarity=0.481  Sum_probs=210.6

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKFGK   89 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (272)
                      +++|++|||||+++||++++++|+++|++|++++|+.+..+++.+.+   +.++.++.+|+++.++++++++++.+.+++
T Consensus         1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~   80 (250)
T TIGR03206         1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGP   80 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            47899999999999999999999999999999999887766555443   457899999999999999999999999999


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHH
Q 024145           90 LDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYG  169 (272)
Q Consensus        90 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a  169 (272)
                      +|++|||+|....  .++.+.+.+++++.+++|+.+++.+++.+.+.|.+.+.+++|++||..+..+.+....|+.+|+|
T Consensus        81 ~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~~~~~Y~~sK~a  158 (250)
T TIGR03206        81 VDVLVNNAGWDKF--GPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSSGEAVYAACKGG  158 (250)
T ss_pred             CCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCCCCchHHHHHHH
Confidence            9999999998654  56777889999999999999999999999999987778999999999998888999999999999


Q ss_pred             HHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCC---CChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCc
Q 024145          170 ILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGG---VDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYV  246 (272)
Q Consensus       170 ~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  246 (272)
                      ++.++++++.++.+.||+++.++||+++|++.....   ..+......+....+. +++.+|+|+|+++.+|++++..++
T Consensus       159 ~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~~~~~~~~  237 (250)
T TIGR03206       159 LVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIPL-GRLGQPDDLPGAILFFSSDDASFI  237 (250)
T ss_pred             HHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCCc-cCCcCHHHHHHHHHHHcCcccCCC
Confidence            999999999999888999999999999999765321   1122222222333333 788999999999999999999999


Q ss_pred             cccEEEecCcee
Q 024145          247 SGQNLVVDGGFS  258 (272)
Q Consensus       247 ~G~~i~~dgG~~  258 (272)
                      +|++|.+|||..
T Consensus       238 ~g~~~~~~~g~~  249 (250)
T TIGR03206       238 TGQVLSVSGGLT  249 (250)
T ss_pred             cCcEEEeCCCcc
Confidence            999999999964

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK07814 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.3e-39  Score=272.65  Aligned_cols=243  Identities=29%  Similarity=0.442  Sum_probs=211.3

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+..+++.+.+   +.++.++.+|++++++++++++++.+.++
T Consensus         7 ~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   86 (263)
T PRK07814          7 RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFG   86 (263)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            578999999999999999999999999999999999887766665554   45788999999999999999999999999


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcC-CCCceEEEEecccccccCCCCchhhhhH
Q 024145           89 KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVP-QQKGCILFTASACTEIAGLGSPAYTISK  167 (272)
Q Consensus        89 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~g~iv~iss~~~~~~~~~~~~Y~~sK  167 (272)
                      ++|++|||||....  ..+.+.+.+++++.+++|+.+++.+++++.++|.+ ++.|+||++||..+..+.++...|++||
T Consensus        87 ~id~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK  164 (263)
T PRK07814         87 RLDIVVNNVGGTMP--NPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGRGFAAYGTAK  164 (263)
T ss_pred             CCCEEEECCCCCCC--CChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCCCCCchhHHHH
Confidence            99999999997654  56778899999999999999999999999999976 4679999999999998999999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCcc
Q 024145          168 YGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVS  247 (272)
Q Consensus       168 ~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  247 (272)
                      ++++.++++++.|+.+ +|++++|+||++.|++..... ........+....+. .+..+|+|++++++|++++...+++
T Consensus       165 ~a~~~~~~~~~~e~~~-~i~v~~i~Pg~v~t~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~va~~~~~l~~~~~~~~~  241 (263)
T PRK07814        165 AALAHYTRLAALDLCP-RIRVNAIAPGSILTSALEVVA-ANDELRAPMEKATPL-RRLGDPEDIAAAAVYLASPAGSYLT  241 (263)
T ss_pred             HHHHHHHHHHHHHHCC-CceEEEEEeCCCcCchhhhcc-CCHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHcCccccCcC
Confidence            9999999999999987 699999999999999765321 122223333333333 6778999999999999998888999


Q ss_pred             ccEEEecCceee
Q 024145          248 GQNLVVDGGFSV  259 (272)
Q Consensus       248 G~~i~~dgG~~~  259 (272)
                      |+.+.+|||...
T Consensus       242 g~~~~~~~~~~~  253 (263)
T PRK07814        242 GKTLEVDGGLTF  253 (263)
T ss_pred             CCEEEECCCccC
Confidence            999999999876

>PRK09186 flagellin modification protein A; Provisional

Probab=100.00  E-value=6.4e-39  Score=271.55  Aligned_cols=238  Identities=29%  Similarity=0.435  Sum_probs=200.0

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhC-----CceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLG-----QDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      +++|++|||||++|||+++++.|+++|++|++++|+++..++..+++.     ..+.++.+|++|+++++++++++.+.+
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   81 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY   81 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            578999999999999999999999999999999999887776665542     246677999999999999999999999


Q ss_pred             CCccEEEeCCCCCCC-CCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccC---------
Q 024145           88 GKLDIMYNNAGILDR-SFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAG---------  157 (272)
Q Consensus        88 g~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~---------  157 (272)
                      +++|++||||+.... ....+.+.+.+++++.+++|+.+++.++++++++|.+++.++||++||..+..+.         
T Consensus        82 ~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~  161 (256)
T PRK09186         82 GKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGTS  161 (256)
T ss_pred             CCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccchhccccc
Confidence            999999999986432 1246778899999999999999999999999999988778899999998765421         


Q ss_pred             -CCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHH
Q 024145          158 -LGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAAL  236 (272)
Q Consensus       158 -~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  236 (272)
                       .....|++||+++++++++++.|+.++||+++.++||++.++...       ...+......+. .++.+|+|+|++++
T Consensus       162 ~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~~-------~~~~~~~~~~~~-~~~~~~~dva~~~~  233 (256)
T PRK09186        162 MTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPE-------AFLNAYKKCCNG-KGMLDPDDICGTLV  233 (256)
T ss_pred             cCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCCH-------HHHHHHHhcCCc-cCCCCHHHhhhhHh
Confidence             122369999999999999999999999999999999998876421       112222222233 67889999999999


Q ss_pred             HHhcCCCCCccccEEEecCcee
Q 024145          237 YLASDESSYVSGQNLVVDGGFS  258 (272)
Q Consensus       237 ~l~s~~~~~~~G~~i~~dgG~~  258 (272)
                      +++++...+++|+++.+|||++
T Consensus       234 ~l~~~~~~~~~g~~~~~~~g~~  255 (256)
T PRK09186        234 FLLSDQSKYITGQNIIVDDGFS  255 (256)
T ss_pred             heeccccccccCceEEecCCcc
Confidence            9999988999999999999975

>PRK12937 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-38  Score=268.14  Aligned_cols=239  Identities=31%  Similarity=0.488  Sum_probs=205.0

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcc-hHHHHHHH---hCCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDK-LGEDLADK---LGQDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~-~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      ++++|+++||||++|||++++++|+++|++|+++.|+.. ..++..++   .+.++.++.+|++++++++++++++.+++
T Consensus         2 ~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (245)
T PRK12937          2 TLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAF   81 (245)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            468899999999999999999999999999988877543 23333333   35678999999999999999999999999


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhH
Q 024145           88 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISK  167 (272)
Q Consensus        88 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK  167 (272)
                      +++|++|||+|....  .++.+.+.+++++++++|+.+++.+++++.+.|.+  .++||++||..+..+.+.+..|+.+|
T Consensus        82 ~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~ss~~~~~~~~~~~~Y~~sK  157 (245)
T PRK12937         82 GRIDVLVNNAGVMPL--GTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQ--GGRIINLSTSVIALPLPGYGPYAASK  157 (245)
T ss_pred             CCCCEEEECCCCCCC--CChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhcc--CcEEEEEeeccccCCCCCCchhHHHH
Confidence            999999999998654  66778899999999999999999999999999854  58999999999888889999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCcc
Q 024145          168 YGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVS  247 (272)
Q Consensus       168 ~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  247 (272)
                      ++++.++++++.|+.+.||++++++||+++|++.... ..++. ...+....++ +++.+|+|+++.++|++++.+.+++
T Consensus       158 ~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~-~~~~~-~~~~~~~~~~-~~~~~~~d~a~~~~~l~~~~~~~~~  234 (245)
T PRK12937        158 AAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNG-KSAEQ-IDQLAGLAPL-ERLGTPEEIAAAVAFLAGPDGAWVN  234 (245)
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhccc-CCHHH-HHHHHhcCCC-CCCCCHHHHHHHHHHHcCccccCcc
Confidence            9999999999999999999999999999999986432 12222 2223333344 6888999999999999999889999


Q ss_pred             ccEEEecCce
Q 024145          248 GQNLVVDGGF  257 (272)
Q Consensus       248 G~~i~~dgG~  257 (272)
                      |+.+.+|||.
T Consensus       235 g~~~~~~~g~  244 (245)
T PRK12937        235 GQVLRVNGGF  244 (245)
T ss_pred             ccEEEeCCCC
Confidence            9999999986

>PRK08278 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.6e-39  Score=275.40  Aligned_cols=235  Identities=26%  Similarity=0.291  Sum_probs=200.5

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcch-------HHHHHHH---hCCceEEEEecCCCHHHHHHHH
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKL-------GEDLADK---LGQDVCYIHCDISNEDEVINLV   80 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~-------~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~   80 (272)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+.       .++..++   .+.++.++.+|+++++++++++
T Consensus         2 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~   81 (273)
T PRK08278          2 MSLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAV   81 (273)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHH
Confidence            45789999999999999999999999999999999987643       2222222   2457889999999999999999


Q ss_pred             HHHHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccC--C
Q 024145           81 DTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAG--L  158 (272)
Q Consensus        81 ~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~--~  158 (272)
                      +++.+.++++|++|||+|....  .+..+.+.+++++++++|+.+++.+++++.++|.+++.|+|+++||..+..+.  +
T Consensus        82 ~~~~~~~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~  159 (273)
T PRK08278         82 AKAVERFGGIDICVNNASAINL--TGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPKWFA  159 (273)
T ss_pred             HHHHHHhCCCCEEEECCCCcCC--CCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhccccccC
Confidence            9999999999999999998655  66788899999999999999999999999999988778999999998877766  7


Q ss_pred             CCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCC-cccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHH
Q 024145          159 GSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPY-GLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALY  237 (272)
Q Consensus       159 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  237 (272)
                      ++..|++||+|++.++++++.|+.++||++|+|+|| +++|++.+....          ...+ .+++.+|+++++.+++
T Consensus       160 ~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~~~~~~~----------~~~~-~~~~~~p~~va~~~~~  228 (273)
T PRK08278        160 PHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAVRNLLG----------GDEA-MRRSRTPEIMADAAYE  228 (273)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHHHHhccc----------cccc-ccccCCHHHHHHHHHH
Confidence            889999999999999999999999999999999999 688876542110          0111 2567899999999999


Q ss_pred             HhcCCCCCccccEEEecCceee
Q 024145          238 LASDESSYVSGQNLVVDGGFSV  259 (272)
Q Consensus       238 l~s~~~~~~~G~~i~~dgG~~~  259 (272)
                      ++++...+++|+++ +|++...
T Consensus       229 l~~~~~~~~~G~~~-~~~~~~~  249 (273)
T PRK08278        229 ILSRPAREFTGNFL-IDEEVLR  249 (273)
T ss_pred             HhcCccccceeEEE-eccchhh
Confidence            99998889999987 5666543

>TIGR02415 23BDH acetoin reductases

Probab=100.00  E-value=7.2e-39  Score=270.93  Aligned_cols=241  Identities=32%  Similarity=0.476  Sum_probs=207.4

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Q 024145           16 KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKFGKLDI   92 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   92 (272)
                      |+++|||++++||++++++|+++|++|++++|+.+..++..+++   +.++.++.+|++|+++++++++++.++++++|+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~   80 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV   80 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            68999999999999999999999999999999877666555444   457889999999999999999999999999999


Q ss_pred             EEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCC-CceEEEEecccccccCCCCchhhhhHHHHH
Q 024145           93 MYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ-KGCILFTASACTEIAGLGSPAYTISKYGIL  171 (272)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~  171 (272)
                      +|||+|....  .++.+.+.+++++.+++|+.+++.+++.+++.|.+.+ .++||++||..+..+.+.+..|+.||++++
T Consensus        81 vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  158 (254)
T TIGR02415        81 MVNNAGVAPI--TPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNPILSAYSSTKFAVR  158 (254)
T ss_pred             EEECCCcCCC--CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCCCCcchHHHHHHHH
Confidence            9999998654  6778899999999999999999999999999997754 489999999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCCh--------hHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCC
Q 024145          172 GLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDP--------ALIESSMSQMGNLKGEFLKTDGIANAALYLASDES  243 (272)
Q Consensus       172 ~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  243 (272)
                      .+++.++.|+.++||+++.++||+++|++.+......        ...........+. +++.+|+|+++++.||+++..
T Consensus       159 ~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~~~l~~~~~  237 (254)
T TIGR02415       159 GLTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIAL-GRPSEPEDVAGLVSFLASEDS  237 (254)
T ss_pred             HHHHHHHHHhcccCeEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHHHhhCCC-CCCCCHHHHHHHHHhhccccc
Confidence            9999999999999999999999999999865321100        0111112222333 778999999999999999999


Q ss_pred             CCccccEEEecCceee
Q 024145          244 SYVSGQNLVVDGGFSV  259 (272)
Q Consensus       244 ~~~~G~~i~~dgG~~~  259 (272)
                      .+++|+++.+|||..+
T Consensus       238 ~~~~g~~~~~d~g~~~  253 (254)
T TIGR02415       238 DYITGQSILVDGGMVY  253 (254)
T ss_pred             CCccCcEEEecCCccC
Confidence            9999999999999765

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-38  Score=270.19  Aligned_cols=246  Identities=30%  Similarity=0.433  Sum_probs=209.5

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      .++++|++|||||+++||++++++|+++|++|++++|+++..++..+.+   +.++.++++|+++.++++++++++.+.+
T Consensus         3 ~~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   82 (262)
T PRK13394          3 SNLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERF   82 (262)
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4578999999999999999999999999999999999987666655544   4568889999999999999999999999


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhh-cCCCCceEEEEecccccccCCCCchhhhh
Q 024145           88 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVM-VPQQKGCILFTASACTEIAGLGSPAYTIS  166 (272)
Q Consensus        88 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~g~iv~iss~~~~~~~~~~~~Y~~s  166 (272)
                      +++|++|||+|....  ....+.+.+++++.+++|+.+++.+++.+++.+ .+.+.++||++||..+..+.+....|+++
T Consensus        83 ~~~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~~~~~~y~~s  160 (262)
T PRK13394         83 GSVDILVSNAGIQIV--NPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTA  160 (262)
T ss_pred             CCCCEEEECCccCCC--CchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCCCCCcccHHH
Confidence            999999999998654  566778899999999999999999999999999 66678999999999888888888999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCC--------h-hHHHHHHhhcCCCCCCCCChHhHHHHHHH
Q 024145          167 KYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVD--------P-ALIESSMSQMGNLKGEFLKTDGIANAALY  237 (272)
Q Consensus       167 K~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~--------~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~  237 (272)
                      |++++++++.++.++.+.||++++++||+++|++.......        . +.....+....+ .+++.+++|+++++++
T Consensus       161 k~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dva~a~~~  239 (262)
T PRK13394        161 KHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTV-DGVFTTVEDVAQTVLF  239 (262)
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHhcCCC-CCCCCCHHHHHHHHHH
Confidence            99999999999999998999999999999999975421100        0 111122222222 3689999999999999


Q ss_pred             HhcCCCCCccccEEEecCceee
Q 024145          238 LASDESSYVSGQNLVVDGGFSV  259 (272)
Q Consensus       238 l~s~~~~~~~G~~i~~dgG~~~  259 (272)
                      +++.....++|+.|.+|+|+.+
T Consensus       240 l~~~~~~~~~g~~~~~~~g~~~  261 (262)
T PRK13394        240 LSSFPSAALTGQSFVVSHGWFM  261 (262)
T ss_pred             HcCccccCCcCCEEeeCCceec
Confidence            9988778899999999999754

>PRK07069 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.3e-38  Score=268.74  Aligned_cols=240  Identities=30%  Similarity=0.411  Sum_probs=203.9

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCCeEEEeecC-cchHHHHHHHhC-----CceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Q 024145           18 AIITGGASGIGAMAVELFHENGAKVVIADVQ-DKLGEDLADKLG-----QDVCYIHCDISNEDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        18 vlItGas~giG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   91 (272)
                      ++||||++|||++++++|+++|++|++++|+ .+..+++.+.+.     ..+.++.+|++++++++++++++.++++++|
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   81 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLS   81 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCcc
Confidence            7999999999999999999999999999998 555555554442     2355688999999999999999999999999


Q ss_pred             EEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHHH
Q 024145           92 IMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGIL  171 (272)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~  171 (272)
                      ++|||+|....  ..+.+.+.+++++++++|+.+++.+++.+++.|.+.+.++||++||..+..+.+++..|+++|++++
T Consensus        82 ~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~Y~~sK~a~~  159 (251)
T PRK07069         82 VLVNNAGVGSF--GAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEPDYTAYNASKAAVA  159 (251)
T ss_pred             EEEECCCcCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCCCCchhHHHHHHHH
Confidence            99999998765  6678889999999999999999999999999998877899999999999988899999999999999


Q ss_pred             HHHHHHHHHhcCCC--cEEEEEeCCcccCCcccCCCC--ChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCcc
Q 024145          172 GLVKCLAAELGQYG--IRVNCVSPYGLATGMSMKGGV--DPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVS  247 (272)
Q Consensus       172 ~~~~~la~e~~~~g--i~v~~i~Pg~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  247 (272)
                      .++++++.|+.+++  |+++.|+||+++|++......  ..+..........+. +++.+|+|+++.+++|+++...+++
T Consensus       160 ~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~va~~~~~l~~~~~~~~~  238 (251)
T PRK07069        160 SLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVPL-GRLGEPDDVAHAVLYLASDESRFVT  238 (251)
T ss_pred             HHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccCCC-CCCcCHHHHHHHHHHHcCccccCcc
Confidence            99999999998765  999999999999998753111  111111222222333 6788999999999999999999999


Q ss_pred             ccEEEecCceeec
Q 024145          248 GQNLVVDGGFSVV  260 (272)
Q Consensus       248 G~~i~~dgG~~~~  260 (272)
                      |+.+.+|||..++
T Consensus       239 g~~i~~~~g~~~~  251 (251)
T PRK07069        239 GAELVIDGGICAM  251 (251)
T ss_pred             CCEEEECCCeecC
Confidence            9999999998753

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=2.3e-38  Score=266.90  Aligned_cols=239  Identities=35%  Similarity=0.557  Sum_probs=203.6

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeec-CcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADV-QDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r-~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      .+++|+++||||++|||++++++|+++|++|+++.+ +++..++..+.+   +.++.++++|++++++++++++++.+.+
T Consensus         3 ~~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (247)
T PRK12935          3 QLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHF   82 (247)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            467899999999999999999999999999987654 344444444433   4578999999999999999999999999


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhH
Q 024145           88 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISK  167 (272)
Q Consensus        88 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK  167 (272)
                      +++|++|||+|....  ..+.+.+.+.+++.+++|+.+++.+++++++.|.+++.+++|++||..+..+.+++..|++||
T Consensus        83 ~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  160 (247)
T PRK12935         83 GKVDILVNNAGITRD--RTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGFGQTNYSAAK  160 (247)
T ss_pred             CCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCCCCCcchHHHH
Confidence            999999999998654  567788899999999999999999999999999877788999999998888888999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCcc
Q 024145          168 YGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVS  247 (272)
Q Consensus       168 ~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  247 (272)
                      +++++++++++.|+.+.||+++.++||+++|++...   .++..........+ .+++.+|||+++++++++++ ..+++
T Consensus       161 ~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~---~~~~~~~~~~~~~~-~~~~~~~edva~~~~~~~~~-~~~~~  235 (247)
T PRK12935        161 AGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAE---VPEEVRQKIVAKIP-KKRFGQADEIAKGVVYLCRD-GAYIT  235 (247)
T ss_pred             HHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhh---ccHHHHHHHHHhCC-CCCCcCHHHHHHHHHHHcCc-ccCcc
Confidence            999999999999999899999999999999998652   22222222222223 36789999999999999975 46899


Q ss_pred             ccEEEecCce
Q 024145          248 GQNLVVDGGF  257 (272)
Q Consensus       248 G~~i~~dgG~  257 (272)
                      |+.+++|||.
T Consensus       236 g~~~~i~~g~  245 (247)
T PRK12935        236 GQQLNINGGL  245 (247)
T ss_pred             CCEEEeCCCc
Confidence            9999999996

>PRK12744 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-38  Score=269.88  Aligned_cols=243  Identities=23%  Similarity=0.377  Sum_probs=193.4

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCc----chHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHH
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQD----KLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTA   83 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~----~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~   83 (272)
                      .++++|++|||||++|||++++++|+++|++|+++.++.    +..++..+++   +.++.++++|++++++++++++++
T Consensus         4 ~~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~   83 (257)
T PRK12744          4 HSLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDA   83 (257)
T ss_pred             CCCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHH
Confidence            346889999999999999999999999999976665432    2233333332   457889999999999999999999


Q ss_pred             HHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchh
Q 024145           84 VSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAY  163 (272)
Q Consensus        84 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y  163 (272)
                      .++++++|++|||||....  .++.+.+.+++++.+++|+.+++.+++++.++|.+  .|++++++|.....+.+.+..|
T Consensus        84 ~~~~~~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~~~iv~~~ss~~~~~~~~~~~Y  159 (257)
T PRK12744         84 KAAFGRPDIAINTVGKVLK--KPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLND--NGKIVTLVTSLLGAFTPFYSAY  159 (257)
T ss_pred             HHhhCCCCEEEECCcccCC--CCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhcc--CCCEEEEecchhcccCCCcccc
Confidence            9999999999999998654  56778899999999999999999999999999864  3677776443332346778899


Q ss_pred             hhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHH--HHHhhcCCC-CCCCCChHhHHHHHHHHhc
Q 024145          164 TISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIE--SSMSQMGNL-KGEFLKTDGIANAALYLAS  240 (272)
Q Consensus       164 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~dva~~~~~l~s  240 (272)
                      ++||+|++.|+++++.|+.++||+|++++||++.|++..... .++...  .......++ ..++.+|+|+++.++||++
T Consensus       160 ~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~  238 (257)
T PRK12744        160 AGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQE-GAEAVAYHKTAAALSPFSKTGLTDIEDIVPFIRFLVT  238 (257)
T ss_pred             hhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhcccc-ccchhhcccccccccccccCCCCCHHHHHHHHHHhhc
Confidence            999999999999999999999999999999999999764311 111100  001111112 1378899999999999999


Q ss_pred             CCCCCccccEEEecCceee
Q 024145          241 DESSYVSGQNLVVDGGFSV  259 (272)
Q Consensus       241 ~~~~~~~G~~i~~dgG~~~  259 (272)
                      + ..+++|+++.+|||...
T Consensus       239 ~-~~~~~g~~~~~~gg~~~  256 (257)
T PRK12744        239 D-GWWITGQTILINGGYTT  256 (257)
T ss_pred             c-cceeecceEeecCCccC
Confidence            5 67899999999999764

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=100.00  E-value=1.2e-38  Score=271.88  Aligned_cols=238  Identities=26%  Similarity=0.351  Sum_probs=191.2

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCeEEEeecC-cchHHHHHHHh----CCceEEEEecCCCHHHH----HHHHHHHHHH
Q 024145           16 KVAIITGGASGIGAMAVELFHENGAKVVIADVQ-DKLGEDLADKL----GQDVCYIHCDISNEDEV----INLVDTAVSK   86 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~----~~~~~~~~~D~~~~~~~----~~~~~~~~~~   86 (272)
                      ++++||||++|||++++++|+++|++|++++|+ ++..+.+.+++    +.++.++.+|++|.+++    +++++.+.+.
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~   81 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA   81 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence            689999999999999999999999999987654 45555555544    24577899999999865    5556666677


Q ss_pred             hCCccEEEeCCCCCCCCCCCCCCCCH-----------HHHHHHHHHHhHHHHHHHHHHHHhhcCC------CCceEEEEe
Q 024145           87 FGKLDIMYNNAGILDRSFGSILDTPK-----------SDLERLINVNTIGGFLGAKHAARVMVPQ------QKGCILFTA  149 (272)
Q Consensus        87 ~g~id~lv~~ag~~~~~~~~~~~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~------~~g~iv~is  149 (272)
                      ++++|+||||||...+  .++.+.+.           +++.+++++|+.+++.+++++.++|.++      ..++|++++
T Consensus        82 ~g~iD~lv~nAG~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~  159 (267)
T TIGR02685        82 FGRCDVLVNNASAFYP--TPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLC  159 (267)
T ss_pred             cCCceEEEECCccCCC--CcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEeh
Confidence            8999999999997654  33333332           3589999999999999999999998543      247899999


Q ss_pred             cccccccCCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChH
Q 024145          150 SACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTD  229 (272)
Q Consensus       150 s~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (272)
                      |..+..+.+.+..|++||+|+++|+++++.|+.++||++++|+||+++|+...    ..... +.+....+...++.+|+
T Consensus       160 s~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~  234 (267)
T TIGR02685       160 DAMTDQPLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAM----PFEVQ-EDYRRKVPLGQREASAE  234 (267)
T ss_pred             hhhccCCCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCcccc----chhHH-HHHHHhCCCCcCCCCHH
Confidence            99888888899999999999999999999999999999999999999876322    11111 22222233434678999


Q ss_pred             hHHHHHHHHhcCCCCCccccEEEecCceeec
Q 024145          230 GIANAALYLASDESSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       230 dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~  260 (272)
                      |++++++|++++...+++|+.+.+|||+.+.
T Consensus       235 ~va~~~~~l~~~~~~~~~G~~~~v~gg~~~~  265 (267)
T TIGR02685       235 QIADVVIFLVSPKAKYITGTCIKVDGGLSLT  265 (267)
T ss_pred             HHHHHHHHHhCcccCCcccceEEECCceecc
Confidence            9999999999999999999999999998763

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=100.00  E-value=1.8e-38  Score=266.30  Aligned_cols=233  Identities=23%  Similarity=0.359  Sum_probs=199.6

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCCeEEEeecCc-chHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           18 AIITGGASGIGAMAVELFHENGAKVVIADVQD-KLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        18 vlItGas~giG~aia~~la~~G~~V~~~~r~~-~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      +|||||++|||++++++|+++|++|++++|+. +..+...+++   +.++.++.+|+++.++++++++++.+.++++|++
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l   80 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV   80 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            58999999999999999999999999888653 3344444333   4578999999999999999999999999999999


Q ss_pred             EeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHH-HhhcCCCCceEEEEecccccccCCCCchhhhhHHHHHH
Q 024145           94 YNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAA-RVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILG  172 (272)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~  172 (272)
                      |||+|....  .++.+.+.++|++++++|+.+++.+++.++ |.+.+++.++||++||..+..+.+.+..|+++|++++.
T Consensus        81 i~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~  158 (239)
T TIGR01831        81 VLNAGITRD--AAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNRGQVNYSAAKAGLIG  158 (239)
T ss_pred             EECCCCCCC--CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCCCCcchHHHHHHHHH
Confidence            999998755  567788899999999999999999999875 44455567899999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccccEEE
Q 024145          173 LVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLV  252 (272)
Q Consensus       173 ~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~  252 (272)
                      ++++++.|+.++||+++.++||+++|++...   ..+...+.. ...++ +++.+|+|+++.++||+++.+.+++|+.+.
T Consensus       159 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---~~~~~~~~~-~~~~~-~~~~~~~~va~~~~~l~~~~~~~~~g~~~~  233 (239)
T TIGR01831       159 ATKALAVELAKRKITVNCIAPGLIDTEMLAE---VEHDLDEAL-KTVPM-NRMGQPAEVASLAGFLMSDGASYVTRQVIS  233 (239)
T ss_pred             HHHHHHHHHhHhCeEEEEEEEccCccccchh---hhHHHHHHH-hcCCC-CCCCCHHHHHHHHHHHcCchhcCccCCEEE
Confidence            9999999999999999999999999999763   122222222 23344 788999999999999999999999999999


Q ss_pred             ecCce
Q 024145          253 VDGGF  257 (272)
Q Consensus       253 ~dgG~  257 (272)
                      +|||.
T Consensus       234 ~~gg~  238 (239)
T TIGR01831       234 VNGGM  238 (239)
T ss_pred             ecCCc
Confidence            99995

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK07774 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.2e-38  Score=265.10  Aligned_cols=245  Identities=30%  Similarity=0.471  Sum_probs=206.6

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (272)
                      |+++++|++|||||++|||++++++|+++|++|++++|+++..+.+.+++   +.++.++.+|+++.++++++++++.++
T Consensus         1 ~~~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   80 (250)
T PRK07774          1 MGRFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSA   80 (250)
T ss_pred             CcccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            45678999999999999999999999999999999999877665555544   346788999999999999999999999


Q ss_pred             hCCccEEEeCCCCCCC-CCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhh
Q 024145           87 FGKLDIMYNNAGILDR-SFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTI  165 (272)
Q Consensus        87 ~g~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~  165 (272)
                      ++++|+||||+|+... ...++.+.+.+++++.+++|+.+++.+++++++.|.+.+.|+||++||..+..   +...|++
T Consensus        81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~---~~~~Y~~  157 (250)
T PRK07774         81 FGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWL---YSNFYGL  157 (250)
T ss_pred             hCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccC---CccccHH
Confidence            9999999999998642 12456778899999999999999999999999999877789999999987654   4568999


Q ss_pred             hHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCC
Q 024145          166 SKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSY  245 (272)
Q Consensus       166 sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  245 (272)
                      ||++++.+++++++++.+.||++++++||+++|++....  .+....+......+. .++.+|+|+++++++++++...+
T Consensus       158 sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~d~a~~~~~~~~~~~~~  234 (250)
T PRK07774        158 AKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTV--TPKEFVADMVKGIPL-SRMGTPEDLVGMCLFLLSDEASW  234 (250)
T ss_pred             HHHHHHHHHHHHHHHhCccCeEEEEEecCcccCcccccc--CCHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhChhhhC
Confidence            999999999999999999999999999999999987632  222222222222233 56789999999999999887778


Q ss_pred             ccccEEEecCceeec
Q 024145          246 VSGQNLVVDGGFSVV  260 (272)
Q Consensus       246 ~~G~~i~~dgG~~~~  260 (272)
                      ++|+++.+|+|.++.
T Consensus       235 ~~g~~~~v~~g~~~~  249 (250)
T PRK07774        235 ITGQIFNVDGGQIIR  249 (250)
T ss_pred             cCCCEEEECCCeecc
Confidence            899999999998764

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=3.1e-38  Score=265.49  Aligned_cols=238  Identities=24%  Similarity=0.387  Sum_probs=205.6

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcc-hHHHHHHH---hCCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Q 024145           16 KVAIITGGASGIGAMAVELFHENGAKVVIADVQDK-LGEDLADK---LGQDVCYIHCDISNEDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~-~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   91 (272)
                      |+++|||++++||++++++|+++|++|++++|++. ...+....   .+.++.++.+|+++.++++++++.+.++++++|
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id   82 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPVD   82 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            68999999999999999999999999999998854 12222222   234689999999999999999999999999999


Q ss_pred             EEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHHH
Q 024145           92 IMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGIL  171 (272)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~  171 (272)
                      ++|||+|....  .++.+.+.+++++.+++|+.+++.+++.+++.+.+++.++||++||..+..+.++++.|++||++++
T Consensus        83 ~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~Y~~sK~a~~  160 (245)
T PRK12824         83 ILVNNAGITRD--SVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQFGQTNYSAAKAGMI  160 (245)
T ss_pred             EEEECCCCCCC--CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCCCCChHHHHHHHHHH
Confidence            99999998754  6677889999999999999999999999999998777899999999999888899999999999999


Q ss_pred             HHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccccEE
Q 024145          172 GLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNL  251 (272)
Q Consensus       172 ~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i  251 (272)
                      ++++.++.++.++||++++++||+++|++.+..   .......+....+. +.+.+++|+++.+.+|+++...+++|+.+
T Consensus       161 ~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~va~~~~~l~~~~~~~~~G~~~  236 (245)
T PRK12824        161 GFTKALASEGARYGITVNCIAPGYIATPMVEQM---GPEVLQSIVNQIPM-KRLGTPEEIAAAVAFLVSEAAGFITGETI  236 (245)
T ss_pred             HHHHHHHHHHHHhCeEEEEEEEcccCCcchhhc---CHHHHHHHHhcCCC-CCCCCHHHHHHHHHHHcCccccCccCcEE
Confidence            999999999999999999999999999987632   12222223333333 77889999999999999888889999999


Q ss_pred             EecCceee
Q 024145          252 VVDGGFSV  259 (272)
Q Consensus       252 ~~dgG~~~  259 (272)
                      .+|||+.+
T Consensus       237 ~~~~g~~~  244 (245)
T PRK12824        237 SINGGLYM  244 (245)
T ss_pred             EECCCeec
Confidence            99999865

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.1e-38  Score=265.11  Aligned_cols=217  Identities=29%  Similarity=0.470  Sum_probs=196.2

Q ss_pred             cCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhC--CceEEEEecCCCHHHHHHHHHHHHHH
Q 024145            9 PFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLG--QDVCYIHCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (272)
                      +..+.+|++||||||++|||++++.+|+++|+.+++.+.+.+..++..+++.  ++++.+.||+++.+++.+.+++++++
T Consensus        32 ~~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e  111 (300)
T KOG1201|consen   32 PLKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKE  111 (300)
T ss_pred             chhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHh
Confidence            5678999999999999999999999999999999999999988887777664  47999999999999999999999999


Q ss_pred             hCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhh
Q 024145           87 FGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTIS  166 (272)
Q Consensus        87 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~s  166 (272)
                      .|.+|+||||||+...  .++.+.+.+++++++++|+.++|..+|+++|.|.+++.|+||.++|.+|..+.++...|++|
T Consensus       112 ~G~V~ILVNNAGI~~~--~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~gl~~YcaS  189 (300)
T KOG1201|consen  112 VGDVDILVNNAGIVTG--KKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPAGLADYCAS  189 (300)
T ss_pred             cCCceEEEeccccccC--CCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCccchhhhhh
Confidence            9999999999999877  78899999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhc---CCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHh
Q 024145          167 KYGILGLVKCLAAELG---QYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLA  239 (272)
Q Consensus       167 K~a~~~~~~~la~e~~---~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  239 (272)
                      |+|+.+|.+++..|+.   .+||+...++|++++|+|... .  .        . .+......+|+.+|+.++.-+
T Consensus       190 K~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~-~--~--------~-~~~l~P~L~p~~va~~Iv~ai  253 (300)
T KOG1201|consen  190 KFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMFDG-A--T--------P-FPTLAPLLEPEYVAKRIVEAI  253 (300)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccCC-C--C--------C-CccccCCCCHHHHHHHHHHHH
Confidence            9999999999999985   457999999999999999873 1  0        1 111245578999999887655

>PRK07074 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4e-38  Score=267.03  Aligned_cols=251  Identities=27%  Similarity=0.421  Sum_probs=213.8

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhC-CceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLG-QDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      +|++|||||+++||++++++|+++|++|++++|+....+.+.+.+. .++.++.+|+++.+++.++++++.++++++|++
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v   81 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVL   81 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5799999999999999999999999999999999887777666553 468899999999999999999999999999999


Q ss_pred             EeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHHHHH
Q 024145           94 YNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGL  173 (272)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~  173 (272)
                      ||++|...+  .++.+.+.+++.+.+++|+.+++.+++++.+.+.+++.++||++||..+.. ..+.+.|+.+|++++.+
T Consensus        82 i~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-~~~~~~y~~sK~a~~~~  158 (257)
T PRK07074         82 VANAGAARA--ASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMA-ALGHPAYSAAKAGLIHY  158 (257)
T ss_pred             EECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcC-CCCCcccHHHHHHHHHH
Confidence            999998655  567778899999999999999999999999999877789999999976654 34677999999999999


Q ss_pred             HHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccccEEEe
Q 024145          174 VKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVV  253 (272)
Q Consensus       174 ~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~  253 (272)
                      +++++.++.++||++++++||+++|++...................+. +++..++|+++++++|+++...+++|+.+.+
T Consensus       159 ~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~  237 (257)
T PRK07074        159 TKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEELKKWYPL-QDFATPDDVANAVLFLASPAARAITGVCLPV  237 (257)
T ss_pred             HHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHHHHHhcCCC-CCCCCHHHHHHHHHHHcCchhcCcCCcEEEe
Confidence            999999999999999999999999998653222222222222222333 7889999999999999998888999999999


Q ss_pred             cCceeeccCccccccc
Q 024145          254 DGGFSVVNPTVMRAYG  269 (272)
Q Consensus       254 dgG~~~~~~~~~~~~~  269 (272)
                      |||....+..+++..+
T Consensus       238 ~~g~~~~~~~~~~~~~  253 (257)
T PRK07074        238 DGGLTAGNREMARTLT  253 (257)
T ss_pred             CCCcCcCChhhhhhhc
Confidence            9999998777776654

>PRK05875 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.5e-38  Score=268.46  Aligned_cols=245  Identities=27%  Similarity=0.352  Sum_probs=210.5

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh-----CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL-----GQDVCYIHCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (272)
                      ++++|++|||||+|+||++++++|+++|++|++++|+++..+...+++     +.++.++.+|++++++++++++++.++
T Consensus         4 ~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   83 (276)
T PRK05875          4 SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAW   83 (276)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            478899999999999999999999999999999999877666555544     246889999999999999999999999


Q ss_pred             hCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhh
Q 024145           87 FGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTIS  166 (272)
Q Consensus        87 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~s  166 (272)
                      ++++|++|||+|.... ..++.+.+.+++.+++++|+.+++.+++++.+.|.+++.++|+++||..+..+.+....|+++
T Consensus        84 ~~~~d~li~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~s  162 (276)
T PRK05875         84 HGRLHGVVHCAGGSET-IGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTHRWFGAYGVT  162 (276)
T ss_pred             cCCCCEEEECCCcccC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCCCCCcchHHH
Confidence            9999999999997543 256677889999999999999999999999999987778899999999988888888999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCc
Q 024145          167 KYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYV  246 (272)
Q Consensus       167 K~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  246 (272)
                      |++++.+++.++.++...+|++++|+||+++|++....... ...........+. +++.+|+|++++++++++....++
T Consensus       163 K~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~~~~~~~~  240 (276)
T PRK05875        163 KSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITES-PELSADYRACTPL-PRVGEVEDVANLAMFLLSDAASWI  240 (276)
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccC-HHHHHHHHcCCCC-CCCcCHHHHHHHHHHHcCchhcCc
Confidence            99999999999999999999999999999999987532221 1111222222233 678899999999999999888899


Q ss_pred             cccEEEecCceee
Q 024145          247 SGQNLVVDGGFSV  259 (272)
Q Consensus       247 ~G~~i~~dgG~~~  259 (272)
                      +|+++.+|+|..+
T Consensus       241 ~g~~~~~~~g~~~  253 (276)
T PRK05875        241 TGQVINVDGGHML  253 (276)
T ss_pred             CCCEEEECCCeec
Confidence            9999999999886

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=5.6e-38  Score=265.87  Aligned_cols=244  Identities=35%  Similarity=0.498  Sum_probs=211.3

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKFGK   89 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (272)
                      +++|++|||||+++||++++++|+++|++|++++|+++..++..+++   +.++.++.+|++++++++++++++.+++++
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   81 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGG   81 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999999999988777666554   467889999999999999999999999999


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHH
Q 024145           90 LDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYG  169 (272)
Q Consensus        90 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a  169 (272)
                      +|++|||+|....  ....+.+.+++++.+++|+.+++.+++.+++.|.+++.++||++||..+..+.++...|+++|++
T Consensus        82 ~d~vi~~a~~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~~k~a  159 (258)
T PRK12429         82 VDILVNNAGIQHV--APIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGSAGKAAYVSAKHG  159 (258)
T ss_pred             CCEEEECCCCCCC--CChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCcchhHHHHHH
Confidence            9999999998655  66778889999999999999999999999999988888999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCC--------Chh-HHHHHHhhcCCCCCCCCChHhHHHHHHHHhc
Q 024145          170 ILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGV--------DPA-LIESSMSQMGNLKGEFLKTDGIANAALYLAS  240 (272)
Q Consensus       170 ~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~--------~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  240 (272)
                      ++.+++.++.|+.+.||+++.++||+++||+......        ... ..........+ .+++.+++|+++++.++++
T Consensus       160 ~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~a~~~~~l~~  238 (258)
T PRK12429        160 LIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVP-QKRFTTVEEIADYALFLAS  238 (258)
T ss_pred             HHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHHhccCC-ccccCCHHHHHHHHHHHcC
Confidence            9999999999999999999999999999988642110        011 11112222222 3688999999999999998


Q ss_pred             CCCCCccccEEEecCceee
Q 024145          241 DESSYVSGQNLVVDGGFSV  259 (272)
Q Consensus       241 ~~~~~~~G~~i~~dgG~~~  259 (272)
                      +....++|++|.+|||++.
T Consensus       239 ~~~~~~~g~~~~~~~g~~~  257 (258)
T PRK12429        239 FAAKGVTGQAWVVDGGWTA  257 (258)
T ss_pred             ccccCccCCeEEeCCCEec
Confidence            8778889999999999864

>PRK06139 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-38  Score=276.71  Aligned_cols=224  Identities=28%  Similarity=0.365  Sum_probs=194.9

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (272)
                      +.++++|++|||||++|||++++++|+++|++|++++|+++.++++.+++   +.++.++.+|++|+++++++++++.+.
T Consensus         2 ~~~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~   81 (330)
T PRK06139          2 MGPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASF   81 (330)
T ss_pred             CcCCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHh
Confidence            34578999999999999999999999999999999999988877766554   567889999999999999999999998


Q ss_pred             hCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhh
Q 024145           87 FGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTIS  166 (272)
Q Consensus        87 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~s  166 (272)
                      ++++|++|||||....  +++.+.+.+++++++++|+.+++.+++.++|+|.+++.|+||++||..+..+.+.+..|++|
T Consensus        82 ~g~iD~lVnnAG~~~~--~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~p~~~~Y~as  159 (330)
T PRK06139         82 GGRIDVWVNNVGVGAV--GRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQPYAAAYSAS  159 (330)
T ss_pred             cCCCCEEEECCCcCCC--CCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCCCCchhHHHH
Confidence            8999999999998765  67889999999999999999999999999999998888999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCC-CcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCC
Q 024145          167 KYGILGLVKCLAAELGQY-GIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDE  242 (272)
Q Consensus       167 K~a~~~~~~~la~e~~~~-gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  242 (272)
                      |+|+.+|+++++.|+.++ ||+|+.|+||+++||+........   .   ....+. ..+.+||++|+++++++...
T Consensus       160 Kaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~~~---~---~~~~~~-~~~~~pe~vA~~il~~~~~~  229 (330)
T PRK06139        160 KFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGANYT---G---RRLTPP-PPVYDPRRVAKAVVRLADRP  229 (330)
T ss_pred             HHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCcccccccccc---c---ccccCC-CCCCCHHHHHHHHHHHHhCC
Confidence            999999999999999875 999999999999999875321100   0   011112 45679999999999988643

>PRK08862 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.3e-38  Score=262.85  Aligned_cols=219  Identities=19%  Similarity=0.224  Sum_probs=187.9

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      +++||+++||||++|||++++++|+++|++|++++|+++..++..+++   +.++..+.+|++++++++++++++.++++
T Consensus         2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (227)
T PRK08862          2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFN   81 (227)
T ss_pred             CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            578999999999999999999999999999999999988877766554   55688899999999999999999999998


Q ss_pred             -CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCC-CceEEEEecccccccCCCCchhhhh
Q 024145           89 -KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ-KGCILFTASACTEIAGLGSPAYTIS  166 (272)
Q Consensus        89 -~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~Y~~s  166 (272)
                       ++|++|||+|.... ..++.+.+.++|.+.+++|+.+++.+++.++++|.+++ +|+||++||..+   .+++..|++|
T Consensus        82 ~~iD~li~nag~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~---~~~~~~Y~as  157 (227)
T PRK08862         82 RAPDVLVNNWTSSPL-PSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDD---HQDLTGVESS  157 (227)
T ss_pred             CCCCEEEECCccCCC-CCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCC---CCCcchhHHH
Confidence             99999999986443 25688889999999999999999999999999998654 799999999654   3567889999


Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCc
Q 024145          167 KYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYV  246 (272)
Q Consensus       167 K~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  246 (272)
                      |+|+++|+++++.|++++||+||+|+||+++|+...    .++. .+..            .||++.+..||++  +.++
T Consensus       158 Kaal~~~~~~la~el~~~~Irvn~v~PG~i~t~~~~----~~~~-~~~~------------~~~~~~~~~~l~~--~~~~  218 (227)
T PRK08862        158 NALVSGFTHSWAKELTPFNIRVGGVVPSIFSANGEL----DAVH-WAEI------------QDELIRNTEYIVA--NEYF  218 (227)
T ss_pred             HHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCCCcc----CHHH-HHHH------------HHHHHhheeEEEe--cccc
Confidence            999999999999999999999999999999998321    1111 1111            1899999999997  6799


Q ss_pred             cccEEEe
Q 024145          247 SGQNLVV  253 (272)
Q Consensus       247 ~G~~i~~  253 (272)
                      +|+.+..
T Consensus       219 tg~~~~~  225 (227)
T PRK08862        219 SGRVVEA  225 (227)
T ss_pred             cceEEee
Confidence            9998764

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=100.00  E-value=1.3e-38  Score=270.11  Aligned_cols=235  Identities=18%  Similarity=0.208  Sum_probs=193.2

Q ss_pred             EEEEeCCCChHHHHHHHHHHH----cCCeEEEeecCcchHHHHHHHh-----CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           17 VAIITGGASGIGAMAVELFHE----NGAKVVIADVQDKLGEDLADKL-----GQDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~----~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      ++|||||++|||++++++|++    .|++|++++|+++..+++.+++     +.++.++.+|++++++++++++++.+.+
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   81 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP   81 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence            689999999999999999997    7999999999988777776655     2368899999999999999999998877


Q ss_pred             CCc----cEEEeCCCCCCCCCCCCCC-CCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCC--CceEEEEecccccccCCCC
Q 024145           88 GKL----DIMYNNAGILDRSFGSILD-TPKSDLERLINVNTIGGFLGAKHAARVMVPQQ--KGCILFTASACTEIAGLGS  160 (272)
Q Consensus        88 g~i----d~lv~~ag~~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~g~iv~iss~~~~~~~~~~  160 (272)
                      +..    |+||||||..........+ .+.+++++.+++|+.+++.+++.++|.|.++.  .++||++||..+..+.+++
T Consensus        82 g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~~~~  161 (256)
T TIGR01500        82 RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFKGW  161 (256)
T ss_pred             ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCCCCc
Confidence            643    6999999975431122333 35789999999999999999999999997642  5799999999998899999


Q ss_pred             chhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCC--ChhHHHHHHhhcCCCCCCCCChHhHHHHHHHH
Q 024145          161 PAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGV--DPALIESSMSQMGNLKGEFLKTDGIANAALYL  238 (272)
Q Consensus       161 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  238 (272)
                      ..|++||+|+++|+++++.|++++||+||+|+||+++|++.+....  ..++..+.+....+. +++.+|+|+|+.++++
T Consensus       162 ~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~eva~~~~~l  240 (256)
T TIGR01500       162 ALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVREESVDPDMRKGLQELKAK-GKLVDPKVSAQKLLSL  240 (256)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHHHHhcCChhHHHHHHHHHhc-CCCCCHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999998652100  011122223333344 7889999999999999


Q ss_pred             hcCCCCCccccEEEe
Q 024145          239 ASDESSYVSGQNLVV  253 (272)
Q Consensus       239 ~s~~~~~~~G~~i~~  253 (272)
                      ++ .+++++|+++.+
T Consensus       241 ~~-~~~~~~G~~~~~  254 (256)
T TIGR01500       241 LE-KDKFKSGAHVDY  254 (256)
T ss_pred             Hh-cCCcCCcceeec
Confidence            96 468999999865

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=100.00  E-value=9.4e-38  Score=262.05  Aligned_cols=237  Identities=26%  Similarity=0.406  Sum_probs=204.7

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCeEEEeec-CcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Q 024145           16 KVAIITGGASGIGAMAVELFHENGAKVVIADV-QDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~~V~~~~r-~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   91 (272)
                      |++|||||++|||++++++|+++|++|+++.| +++..++..++.   +.++.++.+|++++++++++++++.+.++++|
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID   80 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence            68999999999999999999999999998887 444444443332   45788999999999999999999999999999


Q ss_pred             EEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHHH
Q 024145           92 IMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGIL  171 (272)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~  171 (272)
                      ++|||+|....  ..+.+.+.+++++.+++|+.+++.+++.+++.|.+.+.++||++||..+..+.+++..|+++|++++
T Consensus        81 ~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sk~a~~  158 (242)
T TIGR01829        81 VLVNNAGITRD--ATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQFGQTNYSAAKAGMI  158 (242)
T ss_pred             EEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCcchhHHHHHHHH
Confidence            99999998654  5677889999999999999999999999999998877889999999998888889999999999999


Q ss_pred             HHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccccEE
Q 024145          172 GLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNL  251 (272)
Q Consensus       172 ~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i  251 (272)
                      .+++.++.++.++||+++.++||+++|++...  ..+..... .....+. .++.+|+|+++.+.|+++++..+++|+.+
T Consensus       159 ~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~--~~~~~~~~-~~~~~~~-~~~~~~~~~a~~~~~l~~~~~~~~~G~~~  234 (242)
T TIGR01829       159 GFTKALAQEGATKGVTVNTISPGYIATDMVMA--MREDVLNS-IVAQIPV-GRLGRPEEIAAAVAFLASEEAGYITGATL  234 (242)
T ss_pred             HHHHHHHHHhhhhCeEEEEEeeCCCcCccccc--cchHHHHH-HHhcCCC-CCCcCHHHHHHHHHHHcCchhcCccCCEE
Confidence            99999999999999999999999999998753  12222222 2233343 68899999999999999988889999999


Q ss_pred             EecCcee
Q 024145          252 VVDGGFS  258 (272)
Q Consensus       252 ~~dgG~~  258 (272)
                      .+|||.+
T Consensus       235 ~~~gg~~  241 (242)
T TIGR01829       235 SINGGLY  241 (242)
T ss_pred             EecCCcc
Confidence            9999974

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=8.3e-38  Score=263.62  Aligned_cols=239  Identities=33%  Similarity=0.488  Sum_probs=198.7

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCeEEEee-cCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGAKVVIAD-VQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~~V~~~~-r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      .|++|||||++|||.++++.|+++|++|+++. |+++..++..+++   +.++.++.+|++++++++.+++++.+.++++
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRL   81 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence            36899999999999999999999999988765 5545554444433   4578999999999999999999999989999


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCC---CceEEEEecccccccCCC-Cchhhhh
Q 024145           91 DIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ---KGCILFTASACTEIAGLG-SPAYTIS  166 (272)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~g~iv~iss~~~~~~~~~-~~~Y~~s  166 (272)
                      |++|||+|..... .++.+.+.+++++.+++|+.+++.+++++++.+..++   .++||++||..+..+.+. +..|++|
T Consensus        82 d~li~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~~Y~~s  160 (248)
T PRK06947         82 DALVNNAGIVAPS-MPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPNEYVDYAGS  160 (248)
T ss_pred             CEEEECCccCCCC-CChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCCCCcccHhh
Confidence            9999999986442 4567888999999999999999999999999886543   578999999988777664 5689999


Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCc
Q 024145          167 KYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYV  246 (272)
Q Consensus       167 K~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  246 (272)
                      |+++++++++++.++.++||+++.++||+++|++.... ..++.. .......+. ++..+|||+++.+++++++...++
T Consensus       161 K~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~-~~~~~~-~~~~~~~~~-~~~~~~e~va~~~~~l~~~~~~~~  237 (248)
T PRK06947        161 KGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASG-GQPGRA-ARLGAQTPL-GRAGEADEVAETIVWLLSDAASYV  237 (248)
T ss_pred             HHHHHHHHHHHHHHhhhhCcEEEEEeccCccccccccc-CCHHHH-HHHhhcCCC-CCCcCHHHHHHHHHHHcCccccCc
Confidence            99999999999999999999999999999999986531 122221 222223333 677899999999999999998999


Q ss_pred             cccEEEecCce
Q 024145          247 SGQNLVVDGGF  257 (272)
Q Consensus       247 ~G~~i~~dgG~  257 (272)
                      +|++|.+|||.
T Consensus       238 ~G~~~~~~gg~  248 (248)
T PRK06947        238 TGALLDVGGGR  248 (248)
T ss_pred             CCceEeeCCCC
Confidence            99999999983

>PRK05884 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4e-38  Score=261.85  Aligned_cols=216  Identities=21%  Similarity=0.209  Sum_probs=181.9

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEeC
Q 024145           17 VAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNN   96 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~   96 (272)
                      +++||||++|||++++++|+++|++|++++|+.+..++..+++  .+.++.+|++++++++++++++.+   ++|++|||
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~--~~~~~~~D~~~~~~v~~~~~~~~~---~id~lv~~   76 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL--DVDAIVCDNTDPASLEEARGLFPH---HLDTIVNV   76 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc--cCcEEecCCCCHHHHHHHHHHHhh---cCcEEEEC
Confidence            5899999999999999999999999999999887776666554  356889999999999998877643   69999999


Q ss_pred             CCCCCC----CCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHHHH
Q 024145           97 AGILDR----SFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILG  172 (272)
Q Consensus        97 ag~~~~----~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~  172 (272)
                      +|....    ...++.+ +.++|++++++|+.+++.++++++|+|.+  .|+||++||..    .+.+..|++||+|+++
T Consensus        77 ag~~~~~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~g~Iv~isS~~----~~~~~~Y~asKaal~~  149 (223)
T PRK05884         77 PAPSWDAGDPRTYSLAD-TANAWRNALDATVLSAVLTVQSVGDHLRS--GGSIISVVPEN----PPAGSAEAAIKAALSN  149 (223)
T ss_pred             CCccccCCCCcccchhc-CHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCeEEEEecCC----CCCccccHHHHHHHHH
Confidence            985321    0012333 57899999999999999999999999964  58999999976    3456889999999999


Q ss_pred             HHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccccEEE
Q 024145          173 LVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLV  252 (272)
Q Consensus       173 ~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~  252 (272)
                      |+++++.|++++||+||+|+||+++|++...           ... .+.    .+|+|+++.+.||+++++.+++|+++.
T Consensus       150 ~~~~la~e~~~~gI~v~~v~PG~v~t~~~~~-----------~~~-~p~----~~~~~ia~~~~~l~s~~~~~v~G~~i~  213 (223)
T PRK05884        150 WTAGQAAVFGTRGITINAVACGRSVQPGYDG-----------LSR-TPP----PVAAEIARLALFLTTPAARHITGQTLH  213 (223)
T ss_pred             HHHHHHHHhhhcCeEEEEEecCccCchhhhh-----------ccC-CCC----CCHHHHHHHHHHHcCchhhccCCcEEE
Confidence            9999999999999999999999999986431           001 111    389999999999999999999999999


Q ss_pred             ecCceeec
Q 024145          253 VDGGFSVV  260 (272)
Q Consensus       253 ~dgG~~~~  260 (272)
                      +|||..++
T Consensus       214 vdgg~~~~  221 (223)
T PRK05884        214 VSHGALAH  221 (223)
T ss_pred             eCCCeecc
Confidence            99999875

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.9e-37  Score=262.51  Aligned_cols=241  Identities=27%  Similarity=0.416  Sum_probs=203.5

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcc-hHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGAKVVIADVQDK-LGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~-~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      .|++|||||++|||++++++|+++|++|++++|+.. ..++..+.+   +.++.++++|+++++++.++++++.+.++++
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRI   81 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            479999999999999999999999999999988643 333333332   4578999999999999999999999999999


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCC------CceEEEEecccccccCCCCchhh
Q 024145           91 DIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ------KGCILFTASACTEIAGLGSPAYT  164 (272)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~------~g~iv~iss~~~~~~~~~~~~Y~  164 (272)
                      |++|||+|.......++.+.+.+++++.+++|+.+++.+++++.+.|.++.      .++||++||..+..+.++...|+
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~  161 (256)
T PRK12745         82 DCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRGEYC  161 (256)
T ss_pred             CEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCCCCcccH
Confidence            999999998654335677888999999999999999999999999997654      36799999999988888899999


Q ss_pred             hhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhh-cCCCCCCCCChHhHHHHHHHHhcCCC
Q 024145          165 ISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQ-MGNLKGEFLKTDGIANAALYLASDES  243 (272)
Q Consensus       165 ~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~dva~~~~~l~s~~~  243 (272)
                      .||++++.+++.++.|+.++||++++++||+++|++....   .+........ ..+. +++.+|+|+++++.+++++..
T Consensus       162 ~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~d~a~~i~~l~~~~~  237 (256)
T PRK12745        162 ISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPV---TAKYDALIAKGLVPM-PRWGEPEDVARAVAALASGDL  237 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCcccccc---chhHHhhhhhcCCCc-CCCcCHHHHHHHHHHHhCCcc
Confidence            9999999999999999999999999999999999886531   1111222222 2233 678899999999999998888


Q ss_pred             CCccccEEEecCceee
Q 024145          244 SYVSGQNLVVDGGFSV  259 (272)
Q Consensus       244 ~~~~G~~i~~dgG~~~  259 (272)
                      .+++|++|.+|||..+
T Consensus       238 ~~~~G~~~~i~gg~~~  253 (256)
T PRK12745        238 PYSTGQAIHVDGGLSI  253 (256)
T ss_pred             cccCCCEEEECCCeec
Confidence            8899999999999875

>PRK06123 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-37  Score=260.96  Aligned_cols=239  Identities=31%  Similarity=0.459  Sum_probs=198.5

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecC-cchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGAKVVIADVQ-DKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      +|++|||||+++||++++++|+++|++|+++.++ ++..++..+.+   +.++.++++|++|.++++++++++.++++++
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL   81 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            5799999999999999999999999998887643 34444443333   4568899999999999999999999999999


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCC---CCceEEEEecccccccCCC-Cchhhhh
Q 024145           91 DIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQ---QKGCILFTASACTEIAGLG-SPAYTIS  166 (272)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~~g~iv~iss~~~~~~~~~-~~~Y~~s  166 (272)
                      |++|||+|..... .++.+.+.++|++.+++|+.+++.+++++++.|.++   ..|+||++||..+..+.+. +..|++|
T Consensus        82 d~li~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~Y~~s  160 (248)
T PRK06123         82 DALVNNAGILEAQ-MRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGEYIDYAAS  160 (248)
T ss_pred             CEEEECCCCCCCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCCCccchHHH
Confidence            9999999986542 456788899999999999999999999999998654   2578999999988887776 3679999


Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCc
Q 024145          167 KYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYV  246 (272)
Q Consensus       167 K~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  246 (272)
                      |++++++++.++.++.++||++++|+||++.|++.... ..+.... ......++ +++.+|+|+++++++++++...++
T Consensus       161 Kaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~-~~~~~~~-~~~~~~p~-~~~~~~~d~a~~~~~l~~~~~~~~  237 (248)
T PRK06123        161 KGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASG-GEPGRVD-RVKAGIPM-GRGGTAEEVARAILWLLSDEASYT  237 (248)
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhcc-CCHHHHH-HHHhcCCC-CCCcCHHHHHHHHHHHhCccccCc
Confidence            99999999999999999999999999999999975421 1222221 22223344 677899999999999999888899


Q ss_pred             cccEEEecCce
Q 024145          247 SGQNLVVDGGF  257 (272)
Q Consensus       247 ~G~~i~~dgG~  257 (272)
                      +|+.+.+|||.
T Consensus       238 ~g~~~~~~gg~  248 (248)
T PRK06123        238 TGTFIDVSGGR  248 (248)
T ss_pred             cCCEEeecCCC
Confidence            99999999974

>PRK06198 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-37  Score=262.33  Aligned_cols=245  Identities=31%  Similarity=0.408  Sum_probs=207.0

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCe-EEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAK-VVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~-V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (272)
                      ..+++|+++||||+++||++++++|+++|++ |++++|+++..+...+++   +.++.++.+|++++++++++++.+.++
T Consensus         2 ~~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (260)
T PRK06198          2 GRLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEA   81 (260)
T ss_pred             CCCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999 999999876655444433   557888999999999999999999999


Q ss_pred             hCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCC-CceEEEEecccccccCCCCchhhh
Q 024145           87 FGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ-KGCILFTASACTEIAGLGSPAYTI  165 (272)
Q Consensus        87 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~Y~~  165 (272)
                      ++++|++|||+|....  ..+.+.+.+++++++++|+.+++.+++.+++.|.++. .|++|++||..+..+.+....|+.
T Consensus        82 ~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~  159 (260)
T PRK06198         82 FGRLDALVNAAGLTDR--GTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPFLAAYCA  159 (260)
T ss_pred             hCCCCEEEECCCcCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCCCcchhHH
Confidence            9999999999998654  5677889999999999999999999999999997653 589999999998888888899999


Q ss_pred             hHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCC----ChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcC
Q 024145          166 SKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGV----DPALIESSMSQMGNLKGEFLKTDGIANAALYLASD  241 (272)
Q Consensus       166 sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  241 (272)
                      +|+++++++++++.|+.+.||+++.++||+++|++......    .............+ .+++.+++|+++++++++++
T Consensus       160 sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~~l~~~  238 (260)
T PRK06198        160 SKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQP-FGRLLDPDEVARAVAFLLSD  238 (260)
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhccCC-ccCCcCHHHHHHHHHHHcCh
Confidence            99999999999999999999999999999999997431100    01111111112222 36788999999999999998


Q ss_pred             CCCCccccEEEecCcee
Q 024145          242 ESSYVSGQNLVVDGGFS  258 (272)
Q Consensus       242 ~~~~~~G~~i~~dgG~~  258 (272)
                      ...+++|++|.+|||..
T Consensus       239 ~~~~~~G~~~~~~~~~~  255 (260)
T PRK06198        239 ESGLMTGSVIDFDQSVW  255 (260)
T ss_pred             hhCCccCceEeECCccc
Confidence            88899999999999974

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=5.3e-37  Score=258.16  Aligned_cols=241  Identities=39%  Similarity=0.576  Sum_probs=208.9

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEe-ecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIA-DVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~-~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      ++.+|++|||||+++||++++++|+++|++|+++ .|+++..++..+.+   +.++.++.+|++++++++++++++.+.+
T Consensus         2 ~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (247)
T PRK05565          2 KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKF   81 (247)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            4678999999999999999999999999999988 88877665555443   3468899999999999999999999999


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhH
Q 024145           88 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISK  167 (272)
Q Consensus        88 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK  167 (272)
                      +++|++||++|....  .+..+.+.+++++.+++|+.+++.+++.+.+.+.+++.+++|++||..+..+.+....|+.+|
T Consensus        82 ~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~sK  159 (247)
T PRK05565         82 GKIDILVNNAGISNF--GLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGASCEVLYSASK  159 (247)
T ss_pred             CCCCEEEECCCcCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCCCccHHHHHH
Confidence            999999999998743  567788899999999999999999999999999887789999999999888888899999999


Q ss_pred             HHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCcc
Q 024145          168 YGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVS  247 (272)
Q Consensus       168 ~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  247 (272)
                      ++++.+++.++.++.+.|+++++++||+++|++.+...  +...... ....+. +++.+++|+++.++++++.....++
T Consensus       160 ~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~--~~~~~~~-~~~~~~-~~~~~~~~va~~~~~l~~~~~~~~~  235 (247)
T PRK05565        160 GAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFS--EEDKEGL-AEEIPL-GRLGKPEEIAKVVLFLASDDASYIT  235 (247)
T ss_pred             HHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccC--hHHHHHH-HhcCCC-CCCCCHHHHHHHHHHHcCCccCCcc
Confidence            99999999999999989999999999999999876321  1211111 112222 6778999999999999999889999


Q ss_pred             ccEEEecCcee
Q 024145          248 GQNLVVDGGFS  258 (272)
Q Consensus       248 G~~i~~dgG~~  258 (272)
                      |+++.+|+|+.
T Consensus       236 g~~~~~~~~~~  246 (247)
T PRK05565        236 GQIITVDGGWT  246 (247)
T ss_pred             CcEEEecCCcc
Confidence            99999999975

>PRK12746 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.5e-37  Score=259.50  Aligned_cols=242  Identities=30%  Similarity=0.426  Sum_probs=204.0

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEe-ecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIA-DVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~-~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (272)
                      .++++|+++||||+||||++++++|+++|++|++. .|+.+..++..+.+   +.++.++.+|++|++++.++++++.++
T Consensus         2 ~~~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~   81 (254)
T PRK12746          2 KNLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNE   81 (254)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHH
Confidence            45788999999999999999999999999998774 67766655555444   356889999999999999999999887


Q ss_pred             h------CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCC
Q 024145           87 F------GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGS  160 (272)
Q Consensus        87 ~------g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~  160 (272)
                      +      +++|++|||+|....  +.+.+.+.+.++..+++|+.+++.+++.+.+.+.+  .+++|++||..+..+.+++
T Consensus        82 ~~~~~~~~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~v~~sS~~~~~~~~~~  157 (254)
T PRK12746         82 LQIRVGTSEIDILVNNAGIGTQ--GTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRA--EGRVINISSAEVRLGFTGS  157 (254)
T ss_pred             hccccCCCCccEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc--CCEEEEECCHHhcCCCCCC
Confidence            6      479999999998655  66778899999999999999999999999998854  4799999999888888999


Q ss_pred             chhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhc
Q 024145          161 PAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLAS  240 (272)
Q Consensus       161 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  240 (272)
                      ..|+.||++++.++++++.++.++|++++.++||+++|++....... +........... .+++.+++|+++.+.++++
T Consensus       158 ~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~dva~~~~~l~~  235 (254)
T PRK12746        158 IAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDD-PEIRNFATNSSV-FGRIGQVEDIADAVAFLAS  235 (254)
T ss_pred             cchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccC-hhHHHHHHhcCC-cCCCCCHHHHHHHHHHHcC
Confidence            99999999999999999999999999999999999999987532221 222222222222 3778899999999999998


Q ss_pred             CCCCCccccEEEecCcee
Q 024145          241 DESSYVSGQNLVVDGGFS  258 (272)
Q Consensus       241 ~~~~~~~G~~i~~dgG~~  258 (272)
                      +...+++|+.++++||.+
T Consensus       236 ~~~~~~~g~~~~i~~~~~  253 (254)
T PRK12746        236 SDSRWVTGQIIDVSGGFC  253 (254)
T ss_pred             cccCCcCCCEEEeCCCcc
Confidence            877889999999999965

>PRK08703 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.8e-37  Score=259.13  Aligned_cols=231  Identities=20%  Similarity=0.256  Sum_probs=199.2

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh----CCceEEEEecCCC--HHHHHHHHHHH
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL----GQDVCYIHCDISN--EDEVINLVDTA   83 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~--~~~~~~~~~~~   83 (272)
                      |.+|++|+++||||++|||++++++|+++|++|++++|+++..++..+++    +..+.++.+|+++  .++++++++++
T Consensus         1 ~~~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i   80 (239)
T PRK08703          1 MATLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATI   80 (239)
T ss_pred             CCCCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHH
Confidence            34578999999999999999999999999999999999988777666554    2357788999975  67889999999


Q ss_pred             HHHh-CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCch
Q 024145           84 VSKF-GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPA  162 (272)
Q Consensus        84 ~~~~-g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  162 (272)
                      .+.+ +++|++|||||.... ..++.+.+.+++++.+++|+.+++.+++++++.|.+.+.+++++++|..+..+.+++..
T Consensus        81 ~~~~~~~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~  159 (239)
T PRK08703         81 AEATQGKLDGIVHCAGYFYA-LSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKAYWGG  159 (239)
T ss_pred             HHHhCCCCCEEEEecccccc-CCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccccCCCCccc
Confidence            9888 789999999997543 25678889999999999999999999999999998777899999999999888888899


Q ss_pred             hhhhHHHHHHHHHHHHHHhcCC-CcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcC
Q 024145          163 YTISKYGILGLVKCLAAELGQY-GIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASD  241 (272)
Q Consensus       163 Y~~sK~a~~~~~~~la~e~~~~-gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  241 (272)
                      |++||++++.++++++.|+.++ +|+|++|+||+++|++.....  +.+          ...+..+++|++..+.|++++
T Consensus       160 Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~~--~~~----------~~~~~~~~~~~~~~~~~~~~~  227 (239)
T PRK08703        160 FGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSH--PGE----------AKSERKSYGDVLPAFVWWASA  227 (239)
T ss_pred             hHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccccC--CCC----------CccccCCHHHHHHHHHHHhCc
Confidence            9999999999999999999887 699999999999999865211  110          012346899999999999999


Q ss_pred             CCCCccccEEEe
Q 024145          242 ESSYVSGQNLVV  253 (272)
Q Consensus       242 ~~~~~~G~~i~~  253 (272)
                      ++.+++|++|.+
T Consensus       228 ~~~~~~g~~~~~  239 (239)
T PRK08703        228 ESKGRSGEIVYL  239 (239)
T ss_pred             cccCcCCeEeeC
Confidence            999999999864

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=7.9e-37  Score=257.98  Aligned_cols=241  Identities=29%  Similarity=0.522  Sum_probs=201.2

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      ++++|++||||+++|||+++++.|+++|++|++++|++...++..+++   +.++.++++|+++.++++++++.+.+.++
T Consensus         2 ~~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (253)
T PRK08217          2 DLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFG   81 (253)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            478999999999999999999999999999999999887666555544   55788999999999999999999988888


Q ss_pred             CccEEEeCCCCCCCCC------CCC-CCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCC-CCceEEEEecccccccCCCC
Q 024145           89 KLDIMYNNAGILDRSF------GSI-LDTPKSDLERLINVNTIGGFLGAKHAARVMVPQ-QKGCILFTASACTEIAGLGS  160 (272)
Q Consensus        89 ~id~lv~~ag~~~~~~------~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~iss~~~~~~~~~~  160 (272)
                      ++|++|||+|......      ..+ .+.+.+++..++++|+.+++.+.+.+.+.|.++ ..++|+++||.. ..+.+++
T Consensus        82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~-~~~~~~~  160 (253)
T PRK08217         82 QLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIA-RAGNMGQ  160 (253)
T ss_pred             CCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEcccc-ccCCCCC
Confidence            9999999999754310      112 567889999999999999999999999999765 467888888864 4677788


Q ss_pred             chhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhc
Q 024145          161 PAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLAS  240 (272)
Q Consensus       161 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  240 (272)
                      ..|++||+|+++++++++.++.++||++++++||+++|++...  ..+.. .+.+....+. +++.+|+|+++++.++++
T Consensus       161 ~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~--~~~~~-~~~~~~~~~~-~~~~~~~~~a~~~~~l~~  236 (253)
T PRK08217        161 TNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAA--MKPEA-LERLEKMIPV-GRLGEPEEIAHTVRFIIE  236 (253)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccc--cCHHH-HHHHHhcCCc-CCCcCHHHHHHHHHHHHc
Confidence            9999999999999999999999999999999999999998753  22222 2222233333 678899999999999995


Q ss_pred             CCCCCccccEEEecCceee
Q 024145          241 DESSYVSGQNLVVDGGFSV  259 (272)
Q Consensus       241 ~~~~~~~G~~i~~dgG~~~  259 (272)
                      .  .+++|++|.+|||..+
T Consensus       237 ~--~~~~g~~~~~~gg~~~  253 (253)
T PRK08217        237 N--DYVTGRVLEIDGGLRL  253 (253)
T ss_pred             C--CCcCCcEEEeCCCccC
Confidence            3  5789999999999853

>PRK05876 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-37  Score=265.50  Aligned_cols=229  Identities=30%  Similarity=0.449  Sum_probs=192.0

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (272)
                      |..++||++|||||++|||++++++|+++|++|++++|+.+..++..+++   +.++.++.+|++|+++++++++++.++
T Consensus         1 ~~~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   80 (275)
T PRK05876          1 MDGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRL   80 (275)
T ss_pred             CCCcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999999987777666554   346888999999999999999999999


Q ss_pred             hCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCC-CceEEEEecccccccCCCCchhhh
Q 024145           87 FGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ-KGCILFTASACTEIAGLGSPAYTI  165 (272)
Q Consensus        87 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~Y~~  165 (272)
                      ++++|+||||||+...  +++.+.+.++|++.+++|+.+++.+++.++|.|.+++ .|+||++||..+..+.++...|++
T Consensus        81 ~g~id~li~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  158 (275)
T PRK05876         81 LGHVDVVFSNAGIVVG--GPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGV  158 (275)
T ss_pred             cCCCCEEEECCCcCCC--CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCCCCchHHH
Confidence            9999999999998655  6788999999999999999999999999999997655 689999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChh---HHHHH--HhhcCCCCCCCCChHhHHHHHHHHhc
Q 024145          166 SKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPA---LIESS--MSQMGNLKGEFLKTDGIANAALYLAS  240 (272)
Q Consensus       166 sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~---~~~~~--~~~~~~~~~~~~~~~dva~~~~~l~s  240 (272)
                      ||+|+++|+++++.|+.++||++++|+||+++|++.........   .....  .....+....+.+|+|+|+.++..+.
T Consensus       159 sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ai~  238 (275)
T PRK05876        159 AKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAIL  238 (275)
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhcCccccccccccccccccccccCCCHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999998653110000   00000  00001112457899999999987764

>PRK09134 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-36  Score=257.35  Aligned_cols=239  Identities=24%  Similarity=0.318  Sum_probs=198.6

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecC-cchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHH
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQ-DKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVS   85 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (272)
                      +....+|++|||||++|||++++++|+++|++|+++.++ .+..+.+.+++   +.++.++.+|++|.++++++++++.+
T Consensus         4 ~~~~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   83 (258)
T PRK09134          4 MSMAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASA   83 (258)
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            334578999999999999999999999999999887664 34444444433   56788999999999999999999999


Q ss_pred             HhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhh
Q 024145           86 KFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTI  165 (272)
Q Consensus        86 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~  165 (272)
                      .++++|++|||||....  .++.+.+.+++++.+++|+.+++.+++++.+++.+...+++|+++|..+..+.+.+..|++
T Consensus        84 ~~~~iD~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~p~~~~Y~~  161 (258)
T PRK09134         84 ALGPITLLVNNASLFEY--DSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLNPDFLSYTL  161 (258)
T ss_pred             HcCCCCEEEECCcCCCC--CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCCCCchHHHH
Confidence            99999999999998655  5677889999999999999999999999999998777899999999877777777889999


Q ss_pred             hHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCC
Q 024145          166 SKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSY  245 (272)
Q Consensus       166 sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  245 (272)
                      ||++++++++.++.++.+. |++++++||++.|+...    ......... ...+. ++..+|+|+|++++++++.  ..
T Consensus       162 sK~a~~~~~~~la~~~~~~-i~v~~i~PG~v~t~~~~----~~~~~~~~~-~~~~~-~~~~~~~d~a~~~~~~~~~--~~  232 (258)
T PRK09134        162 SKAALWTATRTLAQALAPR-IRVNAIGPGPTLPSGRQ----SPEDFARQH-AATPL-GRGSTPEEIAAAVRYLLDA--PS  232 (258)
T ss_pred             HHHHHHHHHHHHHHHhcCC-cEEEEeecccccCCccc----ChHHHHHHH-hcCCC-CCCcCHHHHHHHHHHHhcC--CC
Confidence            9999999999999999875 99999999999886532    112122221 12223 6778999999999999974  56


Q ss_pred             ccccEEEecCceee
Q 024145          246 VSGQNLVVDGGFSV  259 (272)
Q Consensus       246 ~~G~~i~~dgG~~~  259 (272)
                      ++|+.+.+|||..+
T Consensus       233 ~~g~~~~i~gg~~~  246 (258)
T PRK09134        233 VTGQMIAVDGGQHL  246 (258)
T ss_pred             cCCCEEEECCCeec
Confidence            89999999999864

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=5.8e-37  Score=279.86  Aligned_cols=241  Identities=28%  Similarity=0.364  Sum_probs=205.3

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCc--chHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQD--KLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      ..++||++|||||++|||++++++|+++|++|++++|..  +..++..++++  ..++.+|+++.++++++++.+.++++
T Consensus       206 ~~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~--~~~~~~Dv~~~~~~~~~~~~~~~~~g  283 (450)
T PRK08261        206 RPLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVG--GTALALDITAPDAPARIAEHLAERHG  283 (450)
T ss_pred             cCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcC--CeEEEEeCCCHHHHHHHHHHHHHhCC
Confidence            456899999999999999999999999999999998843  23334444443  35789999999999999999999999


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHH
Q 024145           89 KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKY  168 (272)
Q Consensus        89 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~  168 (272)
                      ++|++|||+|+...  ..+.+.+.++|+.++++|+.+++.+++.+.+.+..++.++||++||..+..+.+++..|+++|+
T Consensus       284 ~id~vi~~AG~~~~--~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~~~~~Y~asKa  361 (450)
T PRK08261        284 GLDIVVHNAGITRD--KTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNRGQTNYAASKA  361 (450)
T ss_pred             CCCEEEECCCcCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCChHHHHHHH
Confidence            99999999998765  6778889999999999999999999999999765566799999999999888899999999999


Q ss_pred             HHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccc
Q 024145          169 GILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSG  248 (272)
Q Consensus       169 a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  248 (272)
                      +++.|+++++.|+.++||++|+|+||+++|++....   +....+......++ .+...|+|+++++.||+++.+.++||
T Consensus       362 al~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~~---~~~~~~~~~~~~~l-~~~~~p~dva~~~~~l~s~~~~~itG  437 (450)
T PRK08261        362 GVIGLVQALAPLLAERGITINAVAPGFIETQMTAAI---PFATREAGRRMNSL-QQGGLPVDVAETIAWLASPASGGVTG  437 (450)
T ss_pred             HHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhcc---chhHHHHHhhcCCc-CCCCCHHHHHHHHHHHhChhhcCCCC
Confidence            999999999999999999999999999999987532   11112222222333 56688999999999999999999999


Q ss_pred             cEEEecCceee
Q 024145          249 QNLVVDGGFSV  259 (272)
Q Consensus       249 ~~i~~dgG~~~  259 (272)
                      ++|.+|||..+
T Consensus       438 ~~i~v~g~~~~  448 (450)
T PRK08261        438 NVVRVCGQSLL  448 (450)
T ss_pred             CEEEECCCccc
Confidence            99999998654

>PRK05599 hypothetical protein; Provisional

Probab=100.00  E-value=4e-37  Score=259.55  Aligned_cols=223  Identities=20%  Similarity=0.194  Sum_probs=190.6

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---C-CceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Q 024145           16 KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---G-QDVCYIHCDISNEDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   91 (272)
                      |+++||||++|||++++++|+ +|++|++++|+.+..+++.+++   + ..+.++++|++|+++++++++++.+.+|++|
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id   79 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS   79 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence            579999999999999999999 5999999999988887776655   2 2478999999999999999999999999999


Q ss_pred             EEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCC-CceEEEEecccccccCCCCchhhhhHHHH
Q 024145           92 IMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ-KGCILFTASACTEIAGLGSPAYTISKYGI  170 (272)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~Y~~sK~a~  170 (272)
                      ++|||+|....  .+..+.+.+++.+++++|+.+++.+++.++|.|.++. +|+||++||..+..+.+++..|++||+|+
T Consensus        80 ~lv~nag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~  157 (246)
T PRK05599         80 LAVVAFGILGD--QERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARRANYVYGSTKAGL  157 (246)
T ss_pred             EEEEecCcCCC--chhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCcCCcchhhHHHHH
Confidence            99999998654  3455677788899999999999999999999997654 69999999999999889999999999999


Q ss_pred             HHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccccE
Q 024145          171 LGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQN  250 (272)
Q Consensus       171 ~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~  250 (272)
                      ++|+++++.|+.++||+||+++||+++|++.....              +. ....+|||+|+.++++++....   ++.
T Consensus       158 ~~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~~--------------~~-~~~~~pe~~a~~~~~~~~~~~~---~~~  219 (246)
T PRK05599        158 DAFCQGLADSLHGSHVRLIIARPGFVIGSMTTGMK--------------PA-PMSVYPRDVAAAVVSAITSSKR---STT  219 (246)
T ss_pred             HHHHHHHHHHhcCCCceEEEecCCcccchhhcCCC--------------CC-CCCCCHHHHHHHHHHHHhcCCC---Cce
Confidence            99999999999999999999999999999864210              00 1125899999999999976432   566


Q ss_pred             EEecCceee
Q 024145          251 LVVDGGFSV  259 (272)
Q Consensus       251 i~~dgG~~~  259 (272)
                      +.++++..+
T Consensus       220 ~~~~~~~~~  228 (246)
T PRK05599        220 LWIPGRLRV  228 (246)
T ss_pred             EEeCccHHH
Confidence            788877543

>PRK07577 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.4e-37  Score=255.56  Aligned_cols=233  Identities=21%  Similarity=0.281  Sum_probs=196.8

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDI   92 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   92 (272)
                      +++|++|||||+++||++++++|+++|++|++++|+.+.      ..  ...++.+|+++.++++++++++.+.+ ++|+
T Consensus         1 ~~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~------~~--~~~~~~~D~~~~~~~~~~~~~~~~~~-~~d~   71 (234)
T PRK07577          1 MSSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID------DF--PGELFACDLADIEQTAATLAQINEIH-PVDA   71 (234)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc------cc--CceEEEeeCCCHHHHHHHHHHHHHhC-CCcE
Confidence            357899999999999999999999999999999998654      11  12578999999999999999988876 6899


Q ss_pred             EEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHHHH
Q 024145           93 MYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILG  172 (272)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~  172 (272)
                      +|||+|....  .++.+.+.+++++.+++|+.+++.+.+.+++.|.+++.++||++||.. ..+.+....|++||+++++
T Consensus        72 vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~-~~~~~~~~~Y~~sK~a~~~  148 (234)
T PRK07577         72 IVNNVGIALP--QPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRA-IFGALDRTSYSAAKSALVG  148 (234)
T ss_pred             EEECCCCCCC--CChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcccc-ccCCCCchHHHHHHHHHHH
Confidence            9999998665  567778899999999999999999999999999887789999999985 4567788899999999999


Q ss_pred             HHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccccEEE
Q 024145          173 LVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLV  252 (272)
Q Consensus       173 ~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~  252 (272)
                      ++++++.|+.++||++++|+||+++|++.+.................+. +++.+|+|++..+++++++...+++|+.|.
T Consensus       149 ~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~  227 (234)
T PRK07577        149 CTRTWALELAEYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASIPM-RRLGTPEEVAAAIAFLLSDDAGFITGQVLG  227 (234)
T ss_pred             HHHHHHHHHHhhCcEEEEEecCcccCcccccccccchhHHHHHhhcCCC-CCCcCHHHHHHHHHHHhCcccCCccceEEE
Confidence            9999999999999999999999999998753211111222222222333 667899999999999998888899999999


Q ss_pred             ecCcee
Q 024145          253 VDGGFS  258 (272)
Q Consensus       253 ~dgG~~  258 (272)
                      +|||.+
T Consensus       228 ~~g~~~  233 (234)
T PRK07577        228 VDGGGS  233 (234)
T ss_pred             ecCCcc
Confidence            999965

>PRK07060 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1e-36  Score=256.35  Aligned_cols=239  Identities=32%  Similarity=0.449  Sum_probs=202.6

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      +++++|+++||||+++||+++++.|+++|++|++++|+.+..+++.+..+  ..++.+|+++.++++++++.    .+++
T Consensus         5 ~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~D~~~~~~v~~~~~~----~~~~   78 (245)
T PRK07060          5 FDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETG--CEPLRLDVGDDAAIRAALAA----AGAF   78 (245)
T ss_pred             cccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC--CeEEEecCCCHHHHHHHHHH----hCCC
Confidence            45789999999999999999999999999999999998877766655543  56788999999988877664    4689


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCC-CceEEEEecccccccCCCCchhhhhHHH
Q 024145           91 DIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ-KGCILFTASACTEIAGLGSPAYTISKYG  169 (272)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~Y~~sK~a  169 (272)
                      |++|||+|....  .+..+.+.+++++.+++|+.+++.+++++.+.+.+++ .++||++||..+..+.+.+..|+.||++
T Consensus        79 d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sK~a  156 (245)
T PRK07060         79 DGLVNCAGIASL--ESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLPDHLAYCASKAA  156 (245)
T ss_pred             CEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCCCCcHhHHHHHH
Confidence            999999998654  5666788999999999999999999999999987544 4899999999998888899999999999


Q ss_pred             HHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCcccc
Q 024145          170 ILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQ  249 (272)
Q Consensus       170 ~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  249 (272)
                      ++.+++.++.++.+.||++++++||+++|++.......+... ..+....+. +++.+++|+++++.+++++....++|+
T Consensus       157 ~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~d~a~~~~~l~~~~~~~~~G~  234 (245)
T PRK07060        157 LDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQKS-GPMLAAIPL-GRFAEVDDVAAPILFLLSDAASMVSGV  234 (245)
T ss_pred             HHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCHHHH-HHHHhcCCC-CCCCCHHHHHHHHHHHcCcccCCccCc
Confidence            999999999999989999999999999999865322222222 222222333 788999999999999999888899999


Q ss_pred             EEEecCceee
Q 024145          250 NLVVDGGFSV  259 (272)
Q Consensus       250 ~i~~dgG~~~  259 (272)
                      .|.+|||..+
T Consensus       235 ~~~~~~g~~~  244 (245)
T PRK07060        235 SLPVDGGYTA  244 (245)
T ss_pred             EEeECCCccC
Confidence            9999999764

>PRK07109 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.9e-37  Score=268.47  Aligned_cols=240  Identities=25%  Similarity=0.310  Sum_probs=201.2

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (272)
                      +..+++|++|||||++|||++++++|+++|++|++++|+++..++..+++   +.++.++.+|++|+++++++++++.++
T Consensus         3 ~~~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~   82 (334)
T PRK07109          3 LKPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEE   82 (334)
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999999988777666544   567889999999999999999999999


Q ss_pred             hCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhh
Q 024145           87 FGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTIS  166 (272)
Q Consensus        87 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~s  166 (272)
                      ++++|++|||+|....  .++.+.+.+++++++++|+.+++.+++.++++|.+++.|+||++||..+..+.+.+..|++|
T Consensus        83 ~g~iD~lInnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~as  160 (334)
T PRK07109         83 LGPIDTWVNNAMVTVF--GPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIPLQSAYCAA  160 (334)
T ss_pred             CCCCCEEEECCCcCCC--CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCCCcchHHHHH
Confidence            9999999999997654  67888999999999999999999999999999988778999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcC--CCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCC-
Q 024145          167 KYGILGLVKCLAAELGQ--YGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDES-  243 (272)
Q Consensus       167 K~a~~~~~~~la~e~~~--~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~-  243 (272)
                      |+++++|+++++.|+..  .+|+++.|+||+++||+.....   .   .......+ ..++.+|||+|+++++++++.. 
T Consensus       161 K~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~~~---~---~~~~~~~~-~~~~~~pe~vA~~i~~~~~~~~~  233 (334)
T PRK07109        161 KHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDWAR---S---RLPVEPQP-VPPIYQPEVVADAILYAAEHPRR  233 (334)
T ss_pred             HHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhhhh---h---hccccccC-CCCCCCHHHHHHHHHHHHhCCCc
Confidence            99999999999999975  4799999999999999765210   0   00011112 2567899999999999997642 


Q ss_pred             -CCccccEEEecCcee
Q 024145          244 -SYVSGQNLVVDGGFS  258 (272)
Q Consensus       244 -~~~~G~~i~~dgG~~  258 (272)
                       .++.+..+.++.+..
T Consensus       234 ~~~vg~~~~~~~~~~~  249 (334)
T PRK07109        234 ELWVGGPAKAAILGNR  249 (334)
T ss_pred             EEEeCcHHHHHHHHHH
Confidence             234455444444433

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=100.00  E-value=1.8e-36  Score=255.44  Aligned_cols=243  Identities=33%  Similarity=0.509  Sum_probs=208.9

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      .+++|++|||||+++||++++++|+++|++|++++|+.+..++..+.+   +.++.++.+|++|+++++++++++.++++
T Consensus         3 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (251)
T PRK12826          3 DLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFG   82 (251)
T ss_pred             CCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            467899999999999999999999999999999999976665555444   34688999999999999999999999999


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccccc-ccCCCCchhhhhH
Q 024145           89 KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTE-IAGLGSPAYTISK  167 (272)
Q Consensus        89 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~-~~~~~~~~Y~~sK  167 (272)
                      ++|++||++|....  .++.+.+.+++++.++.|+.+++.+++.+++.|.+++.+++|++||..+. .+.+.+..|+.+|
T Consensus        83 ~~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~~y~~sK  160 (251)
T PRK12826         83 RLDILVANAGIFPL--TPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVGYPGLAHYAASK  160 (251)
T ss_pred             CCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccCCCCccHHHHHH
Confidence            99999999998765  56778889999999999999999999999999987778899999999888 7788889999999


Q ss_pred             HHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCcc
Q 024145          168 YGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVS  247 (272)
Q Consensus       168 ~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  247 (272)
                      ++++++++.++.++.+.|++++.++||+++|++.....  ............+. +++.+++|+++++.++++....+++
T Consensus       161 ~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~~~~~~~~~  237 (251)
T PRK12826        161 AGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLG--DAQWAEAIAAAIPL-GRLGEPEDIAAAVLFLASDEARYIT  237 (251)
T ss_pred             HHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcC--chHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCccccCcC
Confidence            99999999999999989999999999999999865321  11111222222333 5789999999999999988878899


Q ss_pred             ccEEEecCceee
Q 024145          248 GQNLVVDGGFSV  259 (272)
Q Consensus       248 G~~i~~dgG~~~  259 (272)
                      |+.|.+|||...
T Consensus       238 g~~~~~~~g~~~  249 (251)
T PRK12826        238 GQTLPVDGGATL  249 (251)
T ss_pred             CcEEEECCCccC
Confidence            999999999864

>PRK12827 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-36  Score=254.59  Aligned_cols=239  Identities=30%  Similarity=0.470  Sum_probs=202.6

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecC----cchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHH
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQ----DKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTA   83 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~----~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~   83 (272)
                      .++++|+++||||++|||+++++.|+++|++|++++|.    .+..+++.+++   +.++.++.+|++++++++++++++
T Consensus         2 ~~~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   81 (249)
T PRK12827          2 ASLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAG   81 (249)
T ss_pred             CCcCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH
Confidence            45788999999999999999999999999999887653    33333333333   457899999999999999999999


Q ss_pred             HHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHH-HhhcCCCCceEEEEecccccccCCCCch
Q 024145           84 VSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAA-RVMVPQQKGCILFTASACTEIAGLGSPA  162 (272)
Q Consensus        84 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-~~~~~~~~g~iv~iss~~~~~~~~~~~~  162 (272)
                      .+.++++|++|||+|....  .++.+.+.+++++.+++|+.+++.+++.+. +.+.++..+++|++||..+..+.+++..
T Consensus        82 ~~~~~~~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~  159 (249)
T PRK12827         82 VEEFGRLDILVNNAGIATD--AAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRGQVN  159 (249)
T ss_pred             HHHhCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCCCCCch
Confidence            9988999999999998765  667888999999999999999999999999 6666666789999999999888889999


Q ss_pred             hhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCC
Q 024145          163 YTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDE  242 (272)
Q Consensus       163 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  242 (272)
                      |+.+|++++.+++.++.++.+.|+++++++||+++|++.....  +   ........+. ..+.+++|+++.+++++++.
T Consensus       160 y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~--~---~~~~~~~~~~-~~~~~~~~va~~~~~l~~~~  233 (249)
T PRK12827        160 YAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAA--P---TEHLLNPVPV-QRLGEPDEVAALVAFLVSDA  233 (249)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccc--h---HHHHHhhCCC-cCCcCHHHHHHHHHHHcCcc
Confidence            9999999999999999999989999999999999999866321  1   1222222233 56679999999999999888


Q ss_pred             CCCccccEEEecCce
Q 024145          243 SSYVSGQNLVVDGGF  257 (272)
Q Consensus       243 ~~~~~G~~i~~dgG~  257 (272)
                      ..+++|+.+.+|||.
T Consensus       234 ~~~~~g~~~~~~~g~  248 (249)
T PRK12827        234 ASYVTGQVIPVDGGF  248 (249)
T ss_pred             cCCccCcEEEeCCCC
Confidence            889999999999985

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=100.00  E-value=1.2e-36  Score=288.55  Aligned_cols=247  Identities=32%  Similarity=0.456  Sum_probs=208.8

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh----C-CceEEEEecCCCHHHHHHHHHHHH
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL----G-QDVCYIHCDISNEDEVINLVDTAV   84 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----~-~~~~~~~~D~~~~~~~~~~~~~~~   84 (272)
                      ...+++|++|||||++|||++++++|+++|++|++++|+.+..+...+.+    + ..+.++++|++|+++++++++++.
T Consensus       409 ~~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~  488 (676)
T TIGR02632       409 EKTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVA  488 (676)
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHH
Confidence            35578999999999999999999999999999999999887766555443    2 357889999999999999999999


Q ss_pred             HHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCC-CceEEEEecccccccCCCCchh
Q 024145           85 SKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ-KGCILFTASACTEIAGLGSPAY  163 (272)
Q Consensus        85 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~Y  163 (272)
                      +++|++|++|||||....  .++.+.+.++|+..+++|+.+++.+++.+++.|.+++ .++||++||..+..+.++...|
T Consensus       489 ~~~g~iDilV~nAG~~~~--~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~~~~aY  566 (676)
T TIGR02632       489 LAYGGVDIVVNNAGIATS--SPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKNASAY  566 (676)
T ss_pred             HhcCCCcEEEECCCCCCC--CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCCCCHHH
Confidence            999999999999997654  5677888999999999999999999999999997764 5799999999998999999999


Q ss_pred             hhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCC--cccCCC---------CChhHHHHHHhhcCCCCCCCCChHhHH
Q 024145          164 TISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATG--MSMKGG---------VDPALIESSMSQMGNLKGEFLKTDGIA  232 (272)
Q Consensus       164 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~--~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~dva  232 (272)
                      ++||+++++++++++.|++++||+||+|+||++.++  ++....         .......+......++ ++..+|+|+|
T Consensus       567 ~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l-~r~v~peDVA  645 (676)
T TIGR02632       567 SAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTLL-KRHIFPADIA  645 (676)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHHHHHhcCCc-CCCcCHHHHH
Confidence            999999999999999999999999999999998653  322110         0112222223333333 7889999999


Q ss_pred             HHHHHHhcCCCCCccccEEEecCceee
Q 024145          233 NAALYLASDESSYVSGQNLVVDGGFSV  259 (272)
Q Consensus       233 ~~~~~l~s~~~~~~~G~~i~~dgG~~~  259 (272)
                      +++.+|+++...+++|+++.+|||...
T Consensus       646 ~av~~L~s~~~~~~TG~~i~vDGG~~~  672 (676)
T TIGR02632       646 EAVFFLASSKSEKTTGCIITVDGGVPA  672 (676)
T ss_pred             HHHHHHhCCcccCCcCcEEEECCCchh
Confidence            999999998888999999999999754

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=100.00  E-value=3.8e-36  Score=252.82  Aligned_cols=242  Identities=35%  Similarity=0.526  Sum_probs=206.2

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcch-HHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKL-GEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~-~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      .+++|++||||++|+||++++++|+++|++|+++.|+... .+...+++   +.++.++.+|+++.+++.++++++.+.+
T Consensus         2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (248)
T PRK05557          2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEF   81 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4678999999999999999999999999999777776542 33333332   4578899999999999999999999999


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhH
Q 024145           88 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISK  167 (272)
Q Consensus        88 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK  167 (272)
                      +++|++||++|....  ....+.+.+.+++.+++|+.+++.+.+.+.+.+.+.+.+++|++||..+..+.++...|+.+|
T Consensus        82 ~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~~~~~y~~sk  159 (248)
T PRK05557         82 GGVDILVNNAGITRD--NLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNPGQANYAASK  159 (248)
T ss_pred             CCCCEEEECCCcCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCCCCchhHHHH
Confidence            999999999998765  566778899999999999999999999999999877778999999998888888899999999


Q ss_pred             HHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCcc
Q 024145          168 YGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVS  247 (272)
Q Consensus       168 ~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  247 (272)
                      ++++.+++.++.++.+.|+++++++||+++|++....  .... ........+. +++.+++|+++++.+|+.+...+++
T Consensus       160 ~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~--~~~~-~~~~~~~~~~-~~~~~~~~va~~~~~l~~~~~~~~~  235 (248)
T PRK05557        160 AGVIGFTKSLARELASRGITVNAVAPGFIETDMTDAL--PEDV-KEAILAQIPL-GRLGQPEEIASAVAFLASDEAAYIT  235 (248)
T ss_pred             HHHHHHHHHHHHHhhhhCeEEEEEecCccCCcccccc--ChHH-HHHHHhcCCC-CCCcCHHHHHHHHHHHcCcccCCcc
Confidence            9999999999999998999999999999999886532  2222 2222223333 6788999999999999988788899


Q ss_pred             ccEEEecCceee
Q 024145          248 GQNLVVDGGFSV  259 (272)
Q Consensus       248 G~~i~~dgG~~~  259 (272)
                      |+.|++|||+++
T Consensus       236 g~~~~i~~~~~~  247 (248)
T PRK05557        236 GQTLHVNGGMVM  247 (248)
T ss_pred             ccEEEecCCccC
Confidence            999999999875

>PRK08263 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-36  Score=259.15  Aligned_cols=241  Identities=27%  Similarity=0.324  Sum_probs=202.5

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      .+|++|||||++|||++++++|+++|++|++++|+.+..+++.+..+..+.++++|++|+++++++++.+.+.++++|++
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v   81 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIV   81 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            57899999999999999999999999999999999887777766666778899999999999999999999999999999


Q ss_pred             EeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHHHHH
Q 024145           94 YNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGL  173 (272)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~  173 (272)
                      |||+|....  +++.+.+.+++++.+++|+.+++.+++.+++.|.+++.++||++||..+..+.+....|+.+|++++.+
T Consensus        82 i~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~~  159 (275)
T PRK08263         82 VNNAGYGLF--GMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFPMSGIYHASKWALEGM  159 (275)
T ss_pred             EECCCCccc--cccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCCCccHHHHHHHHHHHH
Confidence            999998755  678889999999999999999999999999999887788999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCC------hhHHHHHHhhcCCCCCCC-CChHhHHHHHHHHhcCCCCCc
Q 024145          174 VKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVD------PALIESSMSQMGNLKGEF-LKTDGIANAALYLASDESSYV  246 (272)
Q Consensus       174 ~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~-~~~~dva~~~~~l~s~~~~~~  246 (272)
                      ++.++.|+.++||+++.++||+++|++.......      .+.....+....+. +++ .+|+|++++++++++....  
T Consensus       160 ~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~dva~~~~~l~~~~~~--  236 (275)
T PRK08263        160 SEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQWSE-RSVDGDPEAAAEALLKLVDAENP--  236 (275)
T ss_pred             HHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHHHHh-ccCCCCHHHHHHHHHHHHcCCCC--
Confidence            9999999999999999999999999987422111      11111112222222 566 8999999999999976532  


Q ss_pred             cccEEEecCceee
Q 024145          247 SGQNLVVDGGFSV  259 (272)
Q Consensus       247 ~G~~i~~dgG~~~  259 (272)
                      +++++...++..+
T Consensus       237 ~~~~~~~~~~~~~  249 (275)
T PRK08263        237 PLRLFLGSGVLDL  249 (275)
T ss_pred             CeEEEeCchHHHH
Confidence            4566655444333

>PRK07825 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.8e-36  Score=258.04  Aligned_cols=216  Identities=30%  Similarity=0.456  Sum_probs=193.1

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   91 (272)
                      ++++|++|||||++|||++++++|+++|++|++++|+++..++..++++ ++.++.+|++|+++++++++++.+.++++|
T Consensus         2 ~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (273)
T PRK07825          2 DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG-LVVGGPLDVTDPASFAAFLDAVEADLGPID   80 (273)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc-cceEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            4678999999999999999999999999999999999888777666654 578899999999999999999999999999


Q ss_pred             EEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHHH
Q 024145           92 IMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGIL  171 (272)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~  171 (272)
                      ++|||+|....  .++.+.+.+++++++++|+.+++.+++.++|.|.+++.|+||++||..+..+.++...|++||++++
T Consensus        81 ~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~  158 (273)
T PRK07825         81 VLVNNAGVMPV--GPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPVPGMATYCASKHAVV  158 (273)
T ss_pred             EEEECCCcCCC--CccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCCCCCcchHHHHHHHH
Confidence            99999998765  6788889999999999999999999999999999888899999999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCC
Q 024145          172 GLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDES  243 (272)
Q Consensus       172 ~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  243 (272)
                      +|+++++.|+.+.||++++|+||+++|++.....   .         . ......+|+|+|+.++.++.+..
T Consensus       159 ~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~~---~---------~-~~~~~~~~~~va~~~~~~l~~~~  217 (273)
T PRK07825        159 GFTDAARLELRGTGVHVSVVLPSFVNTELIAGTG---G---------A-KGFKNVEPEDVAAAIVGTVAKPR  217 (273)
T ss_pred             HHHHHHHHHhhccCcEEEEEeCCcCcchhhcccc---c---------c-cCCCCCCHHHHHHHHHHHHhCCC
Confidence            9999999999999999999999999999865210   0         0 11346799999999999887543

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=5.4e-36  Score=252.94  Aligned_cols=244  Identities=23%  Similarity=0.278  Sum_probs=200.2

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCc-chHHHHHH---HhCCceEEEEecCCCHHHHHHHHHHHHH
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQD-KLGEDLAD---KLGQDVCYIHCDISNEDEVINLVDTAVS   85 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~-~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (272)
                      |+++++|++|||||+++||++++++|+++|++|++..|+. +......+   ..+.++.++.+|++++++++++++++.+
T Consensus         1 ~~~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (252)
T PRK06077          1 MYSLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATID   80 (252)
T ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHH
Confidence            3567899999999999999999999999999988776543 33332222   2245678899999999999999999999


Q ss_pred             HhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhh
Q 024145           86 KFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTI  165 (272)
Q Consensus        86 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~  165 (272)
                      .++++|++|||+|....  .++.+.+.+++++.+++|+.+.+.+++++.+++.+  .++||++||..+..+.+++..|++
T Consensus        81 ~~~~~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~Y~~  156 (252)
T PRK06077         81 RYGVADILVNNAGLGLF--SPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMRE--GGAIVNIASVAGIRPAYGLSIYGA  156 (252)
T ss_pred             HcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhc--CcEEEEEcchhccCCCCCchHHHH
Confidence            99999999999998655  56777888999999999999999999999999865  489999999999989999999999


Q ss_pred             hHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChh-HHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCC
Q 024145          166 SKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPA-LIESSMSQMGNLKGEFLKTDGIANAALYLASDESS  244 (272)
Q Consensus       166 sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  244 (272)
                      ||++++++++.++.|+.+ +|+++.+.||+++|++......... ........ ....+++.+|||++++++++++.  .
T Consensus       157 sK~~~~~~~~~l~~~~~~-~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~dva~~~~~~~~~--~  232 (252)
T PRK06077        157 MKAAVINLTKYLALELAP-KIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAEK-FTLMGKILDPEEVAEFVAAILKI--E  232 (252)
T ss_pred             HHHHHHHHHHHHHHHHhc-CCEEEEEeeCCccChHHHhhhhcccccHHHHHHh-cCcCCCCCCHHHHHHHHHHHhCc--c
Confidence            999999999999999988 9999999999999997542111000 01111112 22336889999999999999964  3


Q ss_pred             CccccEEEecCceeecc
Q 024145          245 YVSGQNLVVDGGFSVVN  261 (272)
Q Consensus       245 ~~~G~~i~~dgG~~~~~  261 (272)
                      .++|+.|.+|+|..+++
T Consensus       233 ~~~g~~~~i~~g~~~~~  249 (252)
T PRK06077        233 SITGQVFVLDSGESLKG  249 (252)
T ss_pred             ccCCCeEEecCCeeccC
Confidence            56899999999998874

>PRK06182 short chain dehydrogenase; Validated

Probab=100.00  E-value=2.6e-36  Score=258.25  Aligned_cols=223  Identities=27%  Similarity=0.332  Sum_probs=189.4

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      ++|+++||||+||||++++++|+++|++|++++|+.+..+++.+   ..+.++.+|++|.++++++++++.+.++++|++
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~---~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~l   78 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLAS---LGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVL   78 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh---CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            57999999999999999999999999999999998776654432   357889999999999999999999999999999


Q ss_pred             EeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHHHHH
Q 024145           94 YNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGL  173 (272)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~  173 (272)
                      |||+|....  +++.+.+.++++..+++|+.+++.+++.++|.|.+++.|+||++||..+..+.+....|++||+++++|
T Consensus        79 i~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~  156 (273)
T PRK06182         79 VNNAGYGSY--GAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYTPLGAWYHATKFALEGF  156 (273)
T ss_pred             EECCCcCCC--CchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCCCCccHhHHHHHHHHHH
Confidence            999998755  678889999999999999999999999999999887789999999998888888888999999999999


Q ss_pred             HHHHHHHhcCCCcEEEEEeCCcccCCcccCCCC--------C-hhH----HHHHHhhcCCCCCCCCChHhHHHHHHHHhc
Q 024145          174 VKCLAAELGQYGIRVNCVSPYGLATGMSMKGGV--------D-PAL----IESSMSQMGNLKGEFLKTDGIANAALYLAS  240 (272)
Q Consensus       174 ~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~--------~-~~~----~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  240 (272)
                      +++++.|+.++||++++|+||+++|++......        . ...    ..+.+....+ .+++.+|+|+|++++++++
T Consensus       157 ~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~vA~~i~~~~~  235 (273)
T PRK06182        157 SDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAASMRSTYG-SGRLSDPSVIADAISKAVT  235 (273)
T ss_pred             HHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHHHHHHhhc-cccCCCHHHHHHHHHHHHh
Confidence            999999999999999999999999997532100        0 000    1111222222 2678899999999999997


Q ss_pred             CC
Q 024145          241 DE  242 (272)
Q Consensus       241 ~~  242 (272)
                      ..
T Consensus       236 ~~  237 (273)
T PRK06182        236 AR  237 (273)
T ss_pred             CC
Confidence            53

>PLN00015 protochlorophyllide reductase

Probab=100.00  E-value=1.7e-36  Score=263.73  Aligned_cols=236  Identities=21%  Similarity=0.193  Sum_probs=192.0

Q ss_pred             EEeCCCChHHHHHHHHHHHcC-CeEEEeecCcchHHHHHHHhC---CceEEEEecCCCHHHHHHHHHHHHHHhCCccEEE
Q 024145           19 IITGGASGIGAMAVELFHENG-AKVVIADVQDKLGEDLADKLG---QDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMY   94 (272)
Q Consensus        19 lItGas~giG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv   94 (272)
                      |||||++|||++++++|+++| ++|++++|+.+..++..+++.   .++.++.+|+++.++++++++++.+.++++|+||
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI   80 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV   80 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence            699999999999999999999 999999998887776666653   4688899999999999999999998888999999


Q ss_pred             eCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCC--CceEEEEeccccccc----------------
Q 024145           95 NNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ--KGCILFTASACTEIA----------------  156 (272)
Q Consensus        95 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~g~iv~iss~~~~~~----------------  156 (272)
                      ||||+..+ ..+..+.+.++|++++++|+.+++.+++.++|.|.+++  .|+||++||..+..+                
T Consensus        81 nnAG~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~  159 (308)
T PLN00015         81 CNAAVYLP-TAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLR  159 (308)
T ss_pred             ECCCcCCC-CCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhhhh
Confidence            99997543 13456788999999999999999999999999998765  689999999876421                


Q ss_pred             -------------------CCCCchhhhhHHHHHHHHHHHHHHhcC-CCcEEEEEeCCcc-cCCcccCCCCChhHHHHHH
Q 024145          157 -------------------GLGSPAYTISKYGILGLVKCLAAELGQ-YGIRVNCVSPYGL-ATGMSMKGGVDPALIESSM  215 (272)
Q Consensus       157 -------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~-~gi~v~~i~Pg~v-~t~~~~~~~~~~~~~~~~~  215 (272)
                                         +.++..|++||+|+..+++.+++++.+ +||++++++||++ +|++.+.............
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~~~~~~~~  239 (308)
T PLN00015        160 GLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFRLLFPPF  239 (308)
T ss_pred             hhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccccHHHHHHHHHH
Confidence                               123457999999999999999999975 6999999999999 7888763111100000001


Q ss_pred             hhcCCCCCCCCChHhHHHHHHHHhcCCCCCccccEEEecCce
Q 024145          216 SQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGF  257 (272)
Q Consensus       216 ~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~  257 (272)
                      .. .+ .+++.+||+.|..+++++++...+.+|+++..+|+.
T Consensus       240 ~~-~~-~~~~~~pe~~a~~~~~l~~~~~~~~~G~~~~~~g~~  279 (308)
T PLN00015        240 QK-YI-TKGYVSEEEAGKRLAQVVSDPSLTKSGVYWSWNGGS  279 (308)
T ss_pred             HH-HH-hcccccHHHhhhhhhhhccccccCCCccccccCCcc
Confidence            11 11 256789999999999999887778999999998874

>PRK06196 oxidoreductase; Provisional

Probab=100.00  E-value=2.7e-36  Score=263.40  Aligned_cols=240  Identities=19%  Similarity=0.185  Sum_probs=190.9

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      .++++|++|||||++|||++++++|+++|++|++++|+++..++..+++. .+.++.+|++|.++++++++++.++++++
T Consensus        22 ~~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~-~v~~~~~Dl~d~~~v~~~~~~~~~~~~~i  100 (315)
T PRK06196         22 HDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID-GVEVVMLDLADLESVRAFAERFLDSGRRI  100 (315)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh-hCeEEEccCCCHHHHHHHHHHHHhcCCCC
Confidence            45789999999999999999999999999999999999887776666553 47889999999999999999999988999


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccc------------cCC
Q 024145           91 DIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEI------------AGL  158 (272)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~------------~~~  158 (272)
                      |+||||||....    ..+.+.++++..+++|+.+++.+++.++|.|.+++.++||++||..+..            +.+
T Consensus       101 D~li~nAg~~~~----~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~  176 (315)
T PRK06196        101 DILINNAGVMAC----PETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHFTRGYD  176 (315)
T ss_pred             CEEEECCCCCCC----CCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccccCccCCCC
Confidence            999999997543    2345678899999999999999999999999887778999999976532            234


Q ss_pred             CCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhh-cCCCCCCCCChHhHHHHHHH
Q 024145          159 GSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQ-MGNLKGEFLKTDGIANAALY  237 (272)
Q Consensus       159 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~dva~~~~~  237 (272)
                      .+..|+.||++++.+++.++.++.++||++++|+||+++|++.+...........+... ..++..++.+|+++|..++|
T Consensus       177 ~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~  256 (315)
T PRK06196        177 KWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREEQVALGWVDEHGNPIDPGFKTPAQGAATQVW  256 (315)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhhhhhhhhhhhhhhhhhhhcCCHhHHHHHHHH
Confidence            45689999999999999999999999999999999999999875321110000011111 11121256899999999999


Q ss_pred             HhcCCCCCccccEEEecC
Q 024145          238 LASDESSYVSGQNLVVDG  255 (272)
Q Consensus       238 l~s~~~~~~~G~~i~~dg  255 (272)
                      +++.......|..+..|.
T Consensus       257 l~~~~~~~~~~g~~~~~~  274 (315)
T PRK06196        257 AATSPQLAGMGGLYCEDC  274 (315)
T ss_pred             HhcCCccCCCCCeEeCCC
Confidence            997654434455555454

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=100.00  E-value=1.5e-35  Score=248.85  Aligned_cols=242  Identities=35%  Similarity=0.531  Sum_probs=209.2

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      ++.+|++|||||+++||++++++|+++|++|++++|++...+...+.+   +.++.++.+|+++++++.++++++.+.++
T Consensus         2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (246)
T PRK05653          2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFG   81 (246)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            567899999999999999999999999999999999987765555433   56789999999999999999999998889


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHH
Q 024145           89 KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKY  168 (272)
Q Consensus        89 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~  168 (272)
                      ++|++||++|....  .+..+.+.+++++.++.|+.+++.+++++.+++.+.+.++||++||..+..+...+..|+.+|+
T Consensus        82 ~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~~~~~~y~~sk~  159 (246)
T PRK05653         82 ALDILVNNAGITRD--ALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGNPGQTNYSAAKA  159 (246)
T ss_pred             CCCEEEECCCcCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccCCCCCcHhHhHHH
Confidence            99999999998655  5667788999999999999999999999999998777789999999988888888899999999


Q ss_pred             HHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccc
Q 024145          169 GILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSG  248 (272)
Q Consensus       169 a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  248 (272)
                      +++.+++++++++.+.|+++++++||.+.+++...   ......+......+. +++.+++|+++.+.++++.....++|
T Consensus       160 ~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~~~~~~~~~~~g  235 (246)
T PRK05653        160 GVIGFTKALALELASRGITVNAVAPGFIDTDMTEG---LPEEVKAEILKEIPL-GRLGQPEEVANAVAFLASDAASYITG  235 (246)
T ss_pred             HHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhh---hhHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHcCchhcCccC
Confidence            99999999999998889999999999999988652   122222222233333 67889999999999999887788999


Q ss_pred             cEEEecCceee
Q 024145          249 QNLVVDGGFSV  259 (272)
Q Consensus       249 ~~i~~dgG~~~  259 (272)
                      ++|.++||+.+
T Consensus       236 ~~~~~~gg~~~  246 (246)
T PRK05653        236 QVIPVNGGMYM  246 (246)
T ss_pred             CEEEeCCCeeC
Confidence            99999999864

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=9.5e-38  Score=238.15  Aligned_cols=246  Identities=30%  Similarity=0.444  Sum_probs=222.1

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGK   89 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (272)
                      .+..+|-+.||||+.+|+|++.+++|++.|+.|++.+-.+...++..++++.++.|...|++++++++.+++..+.+||+
T Consensus         4 ~rs~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgr   83 (260)
T KOG1199|consen    4 LRSTKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGR   83 (260)
T ss_pred             hhhhcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccc
Confidence            34568889999999999999999999999999999999888889999999999999999999999999999999999999


Q ss_pred             ccEEEeCCCCCCCC----CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCC------CCceEEEEecccccccCCC
Q 024145           90 LDIMYNNAGILDRS----FGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQ------QKGCILFTASACTEIAGLG  159 (272)
Q Consensus        90 id~lv~~ag~~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~------~~g~iv~iss~~~~~~~~~  159 (272)
                      +|.+|||||+....    ...-...+.|++++++++|+.++|++++...-.|.++      .+|.||+..|..+..+..+
T Consensus        84 ld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq~g  163 (260)
T KOG1199|consen   84 LDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQTG  163 (260)
T ss_pred             eeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCccc
Confidence            99999999975431    1223456789999999999999999999988888653      4689999999999999999


Q ss_pred             CchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHh
Q 024145          160 SPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLA  239 (272)
Q Consensus       160 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  239 (272)
                      +.+|++||.++-+++.-++++++..|||++.|.||.++||+..   ..++.+..++....|.+.|+..|.|-+..+-...
T Consensus       164 qaaysaskgaivgmtlpiardla~~gir~~tiapglf~tplls---slpekv~~fla~~ipfpsrlg~p~eyahlvqaii  240 (260)
T KOG1199|consen  164 QAAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLS---SLPEKVKSFLAQLIPFPSRLGHPHEYAHLVQAII  240 (260)
T ss_pred             hhhhhcccCceEeeechhhhhcccCceEEEeecccccCChhhh---hhhHHHHHHHHHhCCCchhcCChHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999988   6788888889888888899999999999887766


Q ss_pred             cCCCCCccccEEEecCceeec
Q 024145          240 SDESSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       240 s~~~~~~~G~~i~~dgG~~~~  260 (272)
                        ++.+.||++|++||-....
T Consensus       241 --enp~lngevir~dgalrm~  259 (260)
T KOG1199|consen  241 --ENPYLNGEVIRFDGALRMP  259 (260)
T ss_pred             --hCcccCCeEEEecceecCC
Confidence              5678999999999976543

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=100.00  E-value=2.8e-35  Score=247.75  Aligned_cols=238  Identities=28%  Similarity=0.438  Sum_probs=197.5

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCeEEEe-ecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Q 024145           16 KVAIITGGASGIGAMAVELFHENGAKVVIA-DVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~~V~~~-~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   91 (272)
                      |++|||||+|+||++++++|+++|++|+++ .|+.+..++..+++   +.++.++++|++|+++++++++++.++++++|
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id   81 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA   81 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence            689999999999999999999999998774 56655555444433   45688999999999999999999999999999


Q ss_pred             EEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCC---CCceEEEEecccccccCCC-CchhhhhH
Q 024145           92 IMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQ---QKGCILFTASACTEIAGLG-SPAYTISK  167 (272)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~~g~iv~iss~~~~~~~~~-~~~Y~~sK  167 (272)
                      ++|||+|..... .++.+.+.++++..+++|+.+++.+++.+++.+.++   ..|+||++||..+..+.++ +..|+++|
T Consensus        82 ~vi~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~~~~~Y~~sK  160 (247)
T PRK09730         82 ALVNNAGILFTQ-CTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYAASK  160 (247)
T ss_pred             EEEECCCCCCCC-CccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCCcccchHhHH
Confidence            999999975432 567788999999999999999999999999998764   3578999999988877775 46899999


Q ss_pred             HHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCcc
Q 024145          168 YGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVS  247 (272)
Q Consensus       168 ~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  247 (272)
                      ++++.+++.++.|+.++||++++++||+++||+..... .+... .......++ .+..+|+|+++.+++++++...+++
T Consensus       161 ~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~-~~~~~-~~~~~~~~~-~~~~~~~dva~~~~~~~~~~~~~~~  237 (247)
T PRK09730        161 GAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGG-EPGRV-DRVKSNIPM-QRGGQPEEVAQAIVWLLSDKASYVT  237 (247)
T ss_pred             HHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCC-CHHHH-HHHHhcCCC-CCCcCHHHHHHHHHhhcChhhcCcc
Confidence            99999999999999999999999999999999865321 22221 222222333 5667999999999999998888899


Q ss_pred             ccEEEecCce
Q 024145          248 GQNLVVDGGF  257 (272)
Q Consensus       248 G~~i~~dgG~  257 (272)
                      |+++.+|||.
T Consensus       238 g~~~~~~g~~  247 (247)
T PRK09730        238 GSFIDLAGGK  247 (247)
T ss_pred             CcEEecCCCC
Confidence            9999999973

>PRK07832 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-35  Score=253.85  Aligned_cols=239  Identities=22%  Similarity=0.285  Sum_probs=201.4

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CC-ceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Q 024145           16 KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQ-DVCYIHCDISNEDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   91 (272)
                      |+++||||++|||++++++|+++|++|++++|+.+..++..+++   +. .+.++.+|++++++++++++++.+.++++|
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD   80 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            57999999999999999999999999999999887666655443   22 355688999999999999999999999999


Q ss_pred             EEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCC-CCceEEEEecccccccCCCCchhhhhHHHH
Q 024145           92 IMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQ-QKGCILFTASACTEIAGLGSPAYTISKYGI  170 (272)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~  170 (272)
                      ++|||+|....  ..+.+.+.+++++.+++|+.+++.++++++|+|.++ ..|+||++||..+..+.+.+..|++||+++
T Consensus        81 ~lv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~  158 (272)
T PRK07832         81 VVMNIAGISAW--GTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALPWHAAYSASKFGL  158 (272)
T ss_pred             EEEECCCCCCC--CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCCCCcchHHHHHHH
Confidence            99999998654  677889999999999999999999999999999764 468999999998888888999999999999


Q ss_pred             HHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCC-----ChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCC
Q 024145          171 LGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGV-----DPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSY  245 (272)
Q Consensus       171 ~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  245 (272)
                      ++|+++++.|+.++||++++|+||+++|++......     ..+........   ..++..+|+|+|+.+++++. ...+
T Consensus       159 ~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~vA~~~~~~~~-~~~~  234 (272)
T PRK07832        159 RGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVDR---FRGHAVTPEKAAEKILAGVE-KNRY  234 (272)
T ss_pred             HHHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHHh---cccCCCCHHHHHHHHHHHHh-cCCe
Confidence            999999999999999999999999999998654210     11111222111   12567899999999999995 5578


Q ss_pred             ccccEEEecCceeec
Q 024145          246 VSGQNLVVDGGFSVV  260 (272)
Q Consensus       246 ~~G~~i~~dgG~~~~  260 (272)
                      ++++.+.+++|+.+.
T Consensus       235 ~~~~~~~~~~~~~~~  249 (272)
T PRK07832        235 LVYTSPDIRALYWFK  249 (272)
T ss_pred             EEecCcchHHHHHHH
Confidence            899999999997765

>PRK12828 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-35  Score=246.87  Aligned_cols=235  Identities=27%  Similarity=0.370  Sum_probs=203.7

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh-CCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL-GQDVCYIHCDISNEDEVINLVDTAVSKFGK   89 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (272)
                      .++++|++|||||+|+||++++++|+++|++|++++|++....+..+++ ......+.+|++|.++++++++++.+.+++
T Consensus         3 ~~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (239)
T PRK12828          3 HSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGR   82 (239)
T ss_pred             CCCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            4578999999999999999999999999999999999877655554443 235678889999999999999999999999


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHH
Q 024145           90 LDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYG  169 (272)
Q Consensus        90 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a  169 (272)
                      +|++||++|....  ..+.+.+.+++++.+++|+.+++.+++++.+.+.+++.+++|++||..+..+.+....|+.+|++
T Consensus        83 ~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sk~a  160 (239)
T PRK12828         83 LDALVNIAGAFVW--GTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGPGMGAYAAAKAG  160 (239)
T ss_pred             cCEEEECCcccCc--CChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCCCCcchhHHHHHH
Confidence            9999999997654  55667789999999999999999999999999987778999999999988888888999999999


Q ss_pred             HHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCcccc
Q 024145          170 ILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQ  249 (272)
Q Consensus       170 ~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  249 (272)
                      ++.+++.++.++.+.||+++.++||++.|++......  .         .. ...+.+++|+++++++++++...+++|+
T Consensus       161 ~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~~~--~---------~~-~~~~~~~~dva~~~~~~l~~~~~~~~g~  228 (239)
T PRK12828        161 VARLTEALAAELLDRGITVNAVLPSIIDTPPNRADMP--D---------AD-FSRWVTPEQIAAVIAFLLSDEAQAITGA  228 (239)
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhcCC--c---------hh-hhcCCCHHHHHHHHHHHhCcccccccce
Confidence            9999999999998889999999999999986442110  0         01 1456889999999999998877789999


Q ss_pred             EEEecCceee
Q 024145          250 NLVVDGGFSV  259 (272)
Q Consensus       250 ~i~~dgG~~~  259 (272)
                      .+.+|||+.+
T Consensus       229 ~~~~~g~~~~  238 (239)
T PRK12828        229 SIPVDGGVAL  238 (239)
T ss_pred             EEEecCCEeC
Confidence            9999999864

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=5.6e-35  Score=245.70  Aligned_cols=242  Identities=32%  Similarity=0.477  Sum_probs=204.1

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcch-HHHHHH---HhCCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKL-GEDLAD---KLGQDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~-~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      .++.|++|||||+|+||++++++|+++|++|+++.|+... .+.+.+   ..+.++.++.+|++++++++++++++.+.+
T Consensus         3 ~~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   82 (249)
T PRK12825          3 SLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERF   82 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHc
Confidence            4567899999999999999999999999998776665443 333333   234578999999999999999999999888


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhH
Q 024145           88 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISK  167 (272)
Q Consensus        88 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK  167 (272)
                      +.+|++||++|....  ..+.+.+.+++++.+++|+.+++.+++.+.+++.+.+.+++|++||..+..+.+.+..|+.+|
T Consensus        83 ~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~~~~~~y~~sK  160 (249)
T PRK12825         83 GRIDILVNNAGIFED--KPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWPGRSNYAAAK  160 (249)
T ss_pred             CCCCEEEECCccCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCCCCchHHHHHH
Confidence            999999999997654  567778899999999999999999999999999887788999999999888888899999999


Q ss_pred             HHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCcc
Q 024145          168 YGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVS  247 (272)
Q Consensus       168 ~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  247 (272)
                      ++++++++.++.++.++|++++.++||++.|++...... .... .. ....+ .+++.+++|+++.+.+++++...+++
T Consensus       161 ~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~-~~~~-~~-~~~~~-~~~~~~~~dva~~~~~~~~~~~~~~~  236 (249)
T PRK12825        161 AGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIE-EARE-AK-DAETP-LGRSGTPEDIARAVAFLCSDASDYIT  236 (249)
T ss_pred             HHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccc-hhHH-hh-hccCC-CCCCcCHHHHHHHHHHHhCccccCcC
Confidence            999999999999998889999999999999998763211 1111 11 11223 36789999999999999988888899


Q ss_pred             ccEEEecCceee
Q 024145          248 GQNLVVDGGFSV  259 (272)
Q Consensus       248 G~~i~~dgG~~~  259 (272)
                      |++|.++||..+
T Consensus       237 g~~~~i~~g~~~  248 (249)
T PRK12825        237 GQVIEVTGGVDV  248 (249)
T ss_pred             CCEEEeCCCEee
Confidence            999999999865

>PRK06180 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.9e-35  Score=251.57  Aligned_cols=227  Identities=24%  Similarity=0.283  Sum_probs=192.6

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      .+|++|||||+||||++++++|+++|++|++++|+++..+.+.+..+.++.++.+|++|.+++.++++.+.+.++++|++
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~v   82 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVL   82 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            46899999999999999999999999999999999887776666555678899999999999999999999999999999


Q ss_pred             EeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHHHHH
Q 024145           94 YNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGL  173 (272)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~  173 (272)
                      |||||....  ++..+.+.+++++++++|+.+++.++++++|+|.+++.++||++||..+..+.+++..|+++|++++.+
T Consensus        83 v~~ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~~~~~~Y~~sK~a~~~~  160 (277)
T PRK06180         83 VNNAGYGHE--GAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITMPGIGYYCGSKFALEGI  160 (277)
T ss_pred             EECCCccCC--cccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCCCCcchhHHHHHHHHHH
Confidence            999998654  677888999999999999999999999999999887789999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCcEEEEEeCCcccCCcccCCCC----ChhHHHH---HHh--hcCCCCCCCCChHhHHHHHHHHhcCC
Q 024145          174 VKCLAAELGQYGIRVNCVSPYGLATGMSMKGGV----DPALIES---SMS--QMGNLKGEFLKTDGIANAALYLASDE  242 (272)
Q Consensus       174 ~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~----~~~~~~~---~~~--~~~~~~~~~~~~~dva~~~~~l~s~~  242 (272)
                      +++++.|+.+.|+++++|+||+++|++......    ..+....   ...  .......++.+|+|++++++++++..
T Consensus       161 ~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~l~~~  238 (277)
T PRK06180        161 SESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAREAKSGKQPGDPAKAAQAILAAVESD  238 (277)
T ss_pred             HHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHHhhccCCCCCHHHHHHHHHHHHcCC
Confidence            999999999999999999999999987542111    0011111   110  00112256789999999999998754

>PRK06924 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-35  Score=251.14  Aligned_cols=236  Identities=19%  Similarity=0.273  Sum_probs=194.8

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCc-chHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCC--cc-
Q 024145           16 KVAIITGGASGIGAMAVELFHENGAKVVIADVQD-KLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGK--LD-   91 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~--id-   91 (272)
                      |++|||||++|||++++++|+++|++|++++|++ +..+++.+..+.++.++.+|++++++++++++++.+.++.  ++ 
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~   81 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQYNSNLTFHSLDLQDVHELETNFNEILSSIQEDNVSS   81 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhccCCceEEEEecCCCHHHHHHHHHHHHHhcCcccCCc
Confidence            6899999999999999999999999999999986 4445554445567889999999999999999998876653  22 


Q ss_pred             -EEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCC-CCceEEEEecccccccCCCCchhhhhHHH
Q 024145           92 -IMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQ-QKGCILFTASACTEIAGLGSPAYTISKYG  169 (272)
Q Consensus        92 -~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~iss~~~~~~~~~~~~Y~~sK~a  169 (272)
                       ++|+|+|...+ ..++.+.+.+++.+.+++|+.+++.+++.++++|.+. ..++||++||..+..+.+++..|+++|+|
T Consensus        82 ~~~v~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa  160 (251)
T PRK06924         82 IHLINNAGMVAP-IKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPYFGWSAYCSSKAG  160 (251)
T ss_pred             eEEEEcceeccc-CcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCCCCcHHHhHHHHH
Confidence             89999997544 2567889999999999999999999999999999774 45799999999988899999999999999


Q ss_pred             HHHHHHHHHHHhc--CCCcEEEEEeCCcccCCcccCCC----CChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCC
Q 024145          170 ILGLVKCLAAELG--QYGIRVNCVSPYGLATGMSMKGG----VDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDES  243 (272)
Q Consensus       170 ~~~~~~~la~e~~--~~gi~v~~i~Pg~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  243 (272)
                      ++++++.++.|++  +.||++++|.||+++|++.....    ......... ....+. +++.+|+|+|+.+++++++. 
T Consensus       161 ~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~dva~~~~~l~~~~-  237 (251)
T PRK06924        161 LDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRF-ITLKEE-GKLLSPEYVAKALRNLLETE-  237 (251)
T ss_pred             HHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHH-HHHhhc-CCcCCHHHHHHHHHHHHhcc-
Confidence            9999999999975  46899999999999999854211    111111111 122223 67899999999999999874 


Q ss_pred             CCccccEEEecC
Q 024145          244 SYVSGQNLVVDG  255 (272)
Q Consensus       244 ~~~~G~~i~~dg  255 (272)
                      .+++|+.+.+|+
T Consensus       238 ~~~~G~~~~v~~  249 (251)
T PRK06924        238 DFPNGEVIDIDE  249 (251)
T ss_pred             cCCCCCEeehhh
Confidence            789999999886

>PRK05854 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-35  Score=257.49  Aligned_cols=241  Identities=19%  Similarity=0.208  Sum_probs=189.0

Q ss_pred             ccCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh-----CCceEEEEecCCCHHHHHHHHHH
Q 024145            8 APFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL-----GQDVCYIHCDISNEDEVINLVDT   82 (272)
Q Consensus         8 ~~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~   82 (272)
                      .++.+++||+++||||++|||++++++|+++|++|++++|+.+..++..+++     +.++.++.+|++|.+++++++++
T Consensus         7 ~~~~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~   86 (313)
T PRK05854          7 ITVPDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQ   86 (313)
T ss_pred             ccCcccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHH
Confidence            4567899999999999999999999999999999999999988777666554     24688999999999999999999


Q ss_pred             HHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccccccc------
Q 024145           83 AVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIA------  156 (272)
Q Consensus        83 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~------  156 (272)
                      +.++++++|+||||||+...   +..+.+.++++..+++|+.+++.+++.++|.|.+. .++||++||..+..+      
T Consensus        87 ~~~~~~~iD~li~nAG~~~~---~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~-~~riv~vsS~~~~~~~~~~~~  162 (313)
T PRK05854         87 LRAEGRPIHLLINNAGVMTP---PERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG-RARVTSQSSIAARRGAINWDD  162 (313)
T ss_pred             HHHhCCCccEEEECCccccC---CccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC-CCCeEEEechhhcCCCcCccc
Confidence            99999999999999998653   23456788999999999999999999999999764 689999999876543      


Q ss_pred             ------CCCCchhhhhHHHHHHHHHHHHHHh--cCCCcEEEEEeCCcccCCcccCCCC---C-hhHHHHHHhhcCCCCCC
Q 024145          157 ------GLGSPAYTISKYGILGLVKCLAAEL--GQYGIRVNCVSPYGLATGMSMKGGV---D-PALIESSMSQMGNLKGE  224 (272)
Q Consensus       157 ------~~~~~~Y~~sK~a~~~~~~~la~e~--~~~gi~v~~i~Pg~v~t~~~~~~~~---~-~~~~~~~~~~~~~~~~~  224 (272)
                            ++++..|+.||+|+++|++.++.++  ..+||+||+++||+++|++......   . .................
T Consensus       163 ~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (313)
T PRK05854        163 LNWERSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLLAARPEVGRDKDTLMVRLIRSLSARGFL  242 (313)
T ss_pred             ccccccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCccccccccccchhHHHHHHHHHHhhcccc
Confidence                  2456689999999999999999864  4578999999999999998753111   0 11111221111111012


Q ss_pred             CCChHhHHHHHHHHhcCCCCCccccEEEe
Q 024145          225 FLKTDGIANAALYLASDESSYVSGQNLVV  253 (272)
Q Consensus       225 ~~~~~dva~~~~~l~s~~~~~~~G~~i~~  253 (272)
                      +.++++.+...++++.+... .+|.++.-
T Consensus       243 ~~~~~~ga~~~l~~a~~~~~-~~g~~~~~  270 (313)
T PRK05854        243 VGTVESAILPALYAATSPDA-EGGAFYGP  270 (313)
T ss_pred             cCCHHHHHHHhhheeeCCCC-CCCcEECC
Confidence            45789999999988764432 25666543

>PRK12829 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.6e-35  Score=247.96  Aligned_cols=247  Identities=34%  Similarity=0.483  Sum_probs=206.1

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhC-CceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLG-QDVCYIHCDISNEDEVINLVDTAVSKFGK   89 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (272)
                      .++++|++|||||+|+||++++++|+++|++|++++|+++..+++.+... .++.++.+|++++++++++++++.+.+++
T Consensus         7 ~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   86 (264)
T PRK12829          7 KPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGG   86 (264)
T ss_pred             hccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            45789999999999999999999999999999999998877666655543 25788999999999999999999999999


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCC-ceEEEEecccccccCCCCchhhhhHH
Q 024145           90 LDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQK-GCILFTASACTEIAGLGSPAYTISKY  168 (272)
Q Consensus        90 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-g~iv~iss~~~~~~~~~~~~Y~~sK~  168 (272)
                      +|+|||++|.... .......+.+++++++++|+.+++.+++.+++.+.+.+. ++|+++||..+..+.+.+..|+.+|+
T Consensus        87 ~d~vi~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~~~~~~y~~~K~  165 (264)
T PRK12829         87 LDVLVNNAGIAGP-TGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYPGRTPYAASKW  165 (264)
T ss_pred             CCEEEECCCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCCCCCchhHHHHH
Confidence            9999999998633 256677889999999999999999999999998876655 78999999888888888899999999


Q ss_pred             HHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCC--------ChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhc
Q 024145          169 GILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGV--------DPALIESSMSQMGNLKGEFLKTDGIANAALYLAS  240 (272)
Q Consensus       169 a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  240 (272)
                      +++.+++.++.++...++++++++||+++|++......        .............+ .+++.+++|+++++.++++
T Consensus       166 a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~a~~~~~l~~  244 (264)
T PRK12829        166 AVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKIS-LGRMVEPEDIAATALFLAS  244 (264)
T ss_pred             HHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHHHHhcCC-CCCCCCHHHHHHHHHHHcC
Confidence            99999999999998889999999999999987642110        00011111111122 2578999999999999998


Q ss_pred             CCCCCccccEEEecCceee
Q 024145          241 DESSYVSGQNLVVDGGFSV  259 (272)
Q Consensus       241 ~~~~~~~G~~i~~dgG~~~  259 (272)
                      +....++|+.|.+|||...
T Consensus       245 ~~~~~~~g~~~~i~~g~~~  263 (264)
T PRK12829        245 PAARYITGQAISVDGNVEY  263 (264)
T ss_pred             ccccCccCcEEEeCCCccc
Confidence            7777889999999999753

>PRK06197 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-35  Score=257.11  Aligned_cols=245  Identities=23%  Similarity=0.240  Sum_probs=193.6

Q ss_pred             CCCCCccCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh-----CCceEEEEecCCCHHHHH
Q 024145            3 GPSSAAPFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL-----GQDVCYIHCDISNEDEVI   77 (272)
Q Consensus         3 ~~~~~~~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~   77 (272)
                      ..+....+.+++||++|||||++|||++++++|+++|++|++++|+.+..++..+++     +.++.++.+|++|.++++
T Consensus         4 ~~~~~~~~~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~   83 (306)
T PRK06197          4 TKWTAADIPDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVR   83 (306)
T ss_pred             CCCCccccccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHH
Confidence            444445678899999999999999999999999999999999999877766554443     246889999999999999


Q ss_pred             HHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccc--
Q 024145           78 NLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEI--  155 (272)
Q Consensus        78 ~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~--  155 (272)
                      ++++++.++++++|+||||||...+    ....+.++++..+++|+.+++.+++.+++.|.+.+.++||++||..+..  
T Consensus        84 ~~~~~~~~~~~~iD~li~nAg~~~~----~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~  159 (306)
T PRK06197         84 AAADALRAAYPRIDLLINNAGVMYT----PKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRA  159 (306)
T ss_pred             HHHHHHHhhCCCCCEEEECCccccC----CCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccC
Confidence            9999999999999999999997643    2346678899999999999999999999999887778999999986543  


Q ss_pred             -----------cCCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEE--eCCcccCCcccCCCCChhHHHHHHhhcCCCC
Q 024145          156 -----------AGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCV--SPYGLATGMSMKGGVDPALIESSMSQMGNLK  222 (272)
Q Consensus       156 -----------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i--~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  222 (272)
                                 +.++...|+.||+++++|++.++.+++++|++++++  +||+++|++.+.   .+...........+. 
T Consensus       160 ~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~~~---~~~~~~~~~~~~~~~-  235 (306)
T PRK06197        160 AIHFDDLQWERRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELARN---LPRALRPVATVLAPL-  235 (306)
T ss_pred             CCCccccCcccCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCccccc---CcHHHHHHHHHHHhh-
Confidence                       233456899999999999999999998888777655  799999998763   222222222222221 


Q ss_pred             CCCCChHhHHHHHHHHhcCCCCCccccEEEecCce
Q 024145          223 GEFLKTDGIANAALYLASDESSYVSGQNLVVDGGF  257 (272)
Q Consensus       223 ~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~  257 (272)
                       ...++++.+...++++.+. ...+|+++..||+.
T Consensus       236 -~~~~~~~g~~~~~~~~~~~-~~~~g~~~~~~~~~  268 (306)
T PRK06197        236 -LAQSPEMGALPTLRAATDP-AVRGGQYYGPDGFG  268 (306)
T ss_pred             -hcCCHHHHHHHHHHHhcCC-CcCCCeEEccCccc
Confidence             2356777777777766543 45688888877655

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=100.00  E-value=4.5e-35  Score=233.27  Aligned_cols=248  Identities=26%  Similarity=0.310  Sum_probs=215.1

Q ss_pred             CCCCCcEEEEeCCC--ChHHHHHHHHHHHcCCeEEEeecCcc---hHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHH
Q 024145           11 KRLEGKVAIITGGA--SGIGAMAVELFHENGAKVVIADVQDK---LGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVS   85 (272)
Q Consensus        11 ~~l~~k~vlItGas--~giG~aia~~la~~G~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (272)
                      ..|+||++||+|-.  +.|+..||+.|.++|+++.+++..+.   +.+++.++++ ...+++||+++.++++++++++++
T Consensus         2 g~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e~l~krv~~la~~~~-s~~v~~cDV~~d~~i~~~f~~i~~   80 (259)
T COG0623           2 GLLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERLEKRVEELAEELG-SDLVLPCDVTNDESIDALFATIKK   80 (259)
T ss_pred             CccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHHHhhcc-CCeEEecCCCCHHHHHHHHHHHHH
Confidence            46899999999975  69999999999999999999987763   2233333443 357899999999999999999999


Q ss_pred             HhCCccEEEeCCCCCCC--CCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchh
Q 024145           86 KFGKLDIMYNNAGILDR--SFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAY  163 (272)
Q Consensus        86 ~~g~id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y  163 (272)
                      ++|++|+|||+-+..+.  ..+.+.+++.|.|...+++..++...+.+++.|.|.  +.|.+|.++-..+....|.+..-
T Consensus        81 ~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~--~ggSiltLtYlgs~r~vPnYNvM  158 (259)
T COG0623          81 KWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMN--NGGSILTLTYLGSERVVPNYNVM  158 (259)
T ss_pred             hhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcC--CCCcEEEEEeccceeecCCCchh
Confidence            99999999999998763  236788899999999999999999999999999995  57999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCC
Q 024145          164 TISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDES  243 (272)
Q Consensus       164 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  243 (272)
                      +++|+++|+-+|.+|.+++++|||||.|+-|+++|=..... .....+.+..+..-|+ ++-+++|||++...||+|+.+
T Consensus       159 GvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI-~~f~~~l~~~e~~aPl-~r~vt~eeVG~tA~fLlSdLs  236 (259)
T COG0623         159 GVAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGI-GDFRKMLKENEANAPL-RRNVTIEEVGNTAAFLLSDLS  236 (259)
T ss_pred             HHHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhcc-ccHHHHHHHHHhhCCc-cCCCCHHHhhhhHHHHhcchh
Confidence            99999999999999999999999999999999998554422 3344555555565666 888999999999999999999


Q ss_pred             CCccccEEEecCceeeccCc
Q 024145          244 SYVSGQNLVVDGGFSVVNPT  263 (272)
Q Consensus       244 ~~~~G~~i~~dgG~~~~~~~  263 (272)
                      +.++|++++||+|++++...
T Consensus       237 sgiTGei~yVD~G~~i~~m~  256 (259)
T COG0623         237 SGITGEIIYVDSGYHIMGMG  256 (259)
T ss_pred             cccccceEEEcCCceeeccC
Confidence            99999999999999997654

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=6e-35  Score=246.20  Aligned_cols=232  Identities=25%  Similarity=0.397  Sum_probs=200.4

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh----CCceEEEEecCC--CHHHHHHHHHHHH
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL----GQDVCYIHCDIS--NEDEVINLVDTAV   84 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~--~~~~~~~~~~~~~   84 (272)
                      ..+++|+++|||++++||.+++++|+++|++|++++|+.+..+++.+++    ..++.++.+|++  +.++++++++.+.
T Consensus         8 ~~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   87 (247)
T PRK08945          8 DLLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIE   87 (247)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHH
Confidence            4568999999999999999999999999999999999987766665544    235677788885  8999999999999


Q ss_pred             HHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhh
Q 024145           85 SKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYT  164 (272)
Q Consensus        85 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~  164 (272)
                      +.++++|+||||||..... .++.+.+.+.+++.+++|+.+++.+++++.++|.+++.++||++||..+..+.+.+..|+
T Consensus        88 ~~~~~id~vi~~Ag~~~~~-~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~  166 (247)
T PRK08945         88 EQFGRLDGVLHNAGLLGEL-GPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRANWGAYA  166 (247)
T ss_pred             HHhCCCCEEEECCcccCCC-CCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCCCCCcccH
Confidence            9999999999999976442 456778889999999999999999999999999888889999999999988889999999


Q ss_pred             hhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCC
Q 024145          165 ISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESS  244 (272)
Q Consensus       165 ~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  244 (272)
                      +||++++.+++.++.++...||++++++||+++|++......  .        . . ...+.+|+|+++.++|++++...
T Consensus       167 ~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~~~~--~--------~-~-~~~~~~~~~~~~~~~~~~~~~~~  234 (247)
T PRK08945        167 VSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASAFP--G--------E-D-PQKLKTPEDIMPLYLYLMGDDSR  234 (247)
T ss_pred             HHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhhhcC--c--------c-c-ccCCCCHHHHHHHHHHHhCcccc
Confidence            999999999999999999999999999999999987542110  0        0 1 14678999999999999999889


Q ss_pred             CccccEEEecC
Q 024145          245 YVSGQNLVVDG  255 (272)
Q Consensus       245 ~~~G~~i~~dg  255 (272)
                      +++|+++...-
T Consensus       235 ~~~g~~~~~~~  245 (247)
T PRK08945        235 RKNGQSFDAQP  245 (247)
T ss_pred             ccCCeEEeCCC
Confidence            99999976543

>PRK05866 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.7e-35  Score=252.44  Aligned_cols=218  Identities=27%  Similarity=0.312  Sum_probs=185.7

Q ss_pred             cCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHH
Q 024145            9 PFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVS   85 (272)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (272)
                      +...+++|+++||||++|||++++++|+++|++|++++|+.+..+++.+++   +.++.++.+|++|.++++++++++.+
T Consensus        34 ~~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~  113 (293)
T PRK05866         34 QPVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEK  113 (293)
T ss_pred             CCcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            456688999999999999999999999999999999999988777666554   45688999999999999999999999


Q ss_pred             HhCCccEEEeCCCCCCCCCCCCCCC--CHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccc-cCCCCch
Q 024145           86 KFGKLDIMYNNAGILDRSFGSILDT--PKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEI-AGLGSPA  162 (272)
Q Consensus        86 ~~g~id~lv~~ag~~~~~~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~-~~~~~~~  162 (272)
                      .++++|++|||||....  .++.+.  ++++++..+++|+.+++.++++++|+|.+++.|+||++||..+.. +.++...
T Consensus       114 ~~g~id~li~~AG~~~~--~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~p~~~~  191 (293)
T PRK05866        114 RIGGVDILINNAGRSIR--RPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEASPLFSV  191 (293)
T ss_pred             HcCCCCEEEECCCCCCC--cchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCCcch
Confidence            99999999999998654  344332  468899999999999999999999999888889999999976554 3677889


Q ss_pred             hhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcC
Q 024145          163 YTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASD  241 (272)
Q Consensus       163 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  241 (272)
                      |++||+|+++|+++++.|+.++||++++++||+++|++......           ...  ....+||++|+.++..+..
T Consensus       192 Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~~~~-----------~~~--~~~~~pe~vA~~~~~~~~~  257 (293)
T PRK05866        192 YNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPTKA-----------YDG--LPALTADEAAEWMVTAART  257 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCcccccccc-----------ccC--CCCCCHHHHHHHHHHHHhc
Confidence            99999999999999999999999999999999999998752110           001  1246899999999888754

>PRK08324 short chain dehydrogenase; Validated

Probab=100.00  E-value=6.7e-35  Score=277.80  Aligned_cols=247  Identities=36%  Similarity=0.491  Sum_probs=213.0

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCC--ceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQ--DVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      ...+.||++|||||+||||++++++|+++|++|++++|+.+..+...+.++.  ++.++.+|++++++++++++++.+.+
T Consensus       417 ~~~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~  496 (681)
T PRK08324        417 PKPLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAF  496 (681)
T ss_pred             CcCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            3456899999999999999999999999999999999998877777666654  78899999999999999999999999


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCC-CceEEEEecccccccCCCCchhhhh
Q 024145           88 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ-KGCILFTASACTEIAGLGSPAYTIS  166 (272)
Q Consensus        88 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~Y~~s  166 (272)
                      |++|++|||+|....  .++.+.+.++|+..+++|+.+++.+++.+.+.|.+++ .|+||++||..+..+.++...|++|
T Consensus       497 g~iDvvI~~AG~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~~~~~Y~as  574 (681)
T PRK08324        497 GGVDIVVSNAGIAIS--GPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPNFGAYGAA  574 (681)
T ss_pred             CCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCCCcHHHHHH
Confidence            999999999998765  6788889999999999999999999999999998766 4899999999998888899999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEEeCCcc--cCCcccCCC---------CChhHHHHHHhhcCCCCCCCCChHhHHHHH
Q 024145          167 KYGILGLVKCLAAELGQYGIRVNCVSPYGL--ATGMSMKGG---------VDPALIESSMSQMGNLKGEFLKTDGIANAA  235 (272)
Q Consensus       167 K~a~~~~~~~la~e~~~~gi~v~~i~Pg~v--~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  235 (272)
                      |+++++++++++.+++++||++|.|+||.+  .|++.....         ...++..+..... .+.+++.+++|+++++
T Consensus       575 Kaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~l~~~v~~~DvA~a~  653 (681)
T PRK08324        575 KAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRAR-NLLKREVTPEDVAEAV  653 (681)
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccchhhhhhhhhccCChHHHHHHHHhc-CCcCCccCHHHHHHHH
Confidence            999999999999999999999999999999  787654211         0111111222222 2337889999999999


Q ss_pred             HHHhcCCCCCccccEEEecCceee
Q 024145          236 LYLASDESSYVSGQNLVVDGGFSV  259 (272)
Q Consensus       236 ~~l~s~~~~~~~G~~i~~dgG~~~  259 (272)
                      ++++++....++|+.+++|||...
T Consensus       654 ~~l~s~~~~~~tG~~i~vdgG~~~  677 (681)
T PRK08324        654 VFLASGLLSKTTGAIITVDGGNAA  677 (681)
T ss_pred             HHHhCccccCCcCCEEEECCCchh
Confidence            999987778899999999999764

>PRK07454 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.1e-35  Score=245.20  Aligned_cols=225  Identities=26%  Similarity=0.312  Sum_probs=193.7

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      ++|+++||||+++||++++++|+++|++|++++|+++..+++.+.+   +.++.++.+|+++.+++.++++.+.++++++
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCP   84 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4689999999999999999999999999999999887666555443   4578899999999999999999999999999


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHH
Q 024145           91 DIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGI  170 (272)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~  170 (272)
                      |++|||+|....  .++.+.+.+++++.+++|+.+++.+++.++++|.+++.++||++||..+..+.+++..|+.+|+++
T Consensus        85 d~lv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~  162 (241)
T PRK07454         85 DVLINNAGMAYT--GPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFPQWGAYCVSKAAL  162 (241)
T ss_pred             CEEEECCCccCC--CchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCCCccHHHHHHHHH
Confidence            999999998654  567788899999999999999999999999999887789999999999888888999999999999


Q ss_pred             HHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccccE
Q 024145          171 LGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQN  250 (272)
Q Consensus       171 ~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~  250 (272)
                      +.++++++.|+.++||++++|+||+++|++.....  .   ..   . .. ..+..+|+|+|++++++++++..++.++.
T Consensus       163 ~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~~--~---~~---~-~~-~~~~~~~~~va~~~~~l~~~~~~~~~~~~  232 (241)
T PRK07454        163 AAFTKCLAEEERSHGIRVCTITLGAVNTPLWDTET--V---QA---D-FD-RSAMLSPEQVAQTILHLAQLPPSAVIEDL  232 (241)
T ss_pred             HHHHHHHHHHhhhhCCEEEEEecCcccCCcccccc--c---cc---c-cc-cccCCCHHHHHHHHHHHHcCCccceeeeE
Confidence            99999999999999999999999999999854210  0   00   0 01 13567999999999999987765555444

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=100.00  E-value=1e-34  Score=244.98  Aligned_cols=230  Identities=18%  Similarity=0.241  Sum_probs=192.6

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEe
Q 024145           16 KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYN   95 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~   95 (272)
                      ++++||||+||||++++++|+++|++|++++|+++..+.+.+.++.++.++.+|+++.++++++++++.+.++++|++||
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~   80 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVN   80 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            47899999999999999999999999999999988777777766778899999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHHHHHHH
Q 024145           96 NAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVK  175 (272)
Q Consensus        96 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~~~  175 (272)
                      |+|.... ..+..+.+.+++++++++|+.+++.+++.+.++|.+++.++||++||..+..+.++...|+.+|++++++++
T Consensus        81 ~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~~~~~  159 (248)
T PRK10538         81 NAGLALG-LEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSL  159 (248)
T ss_pred             CCCccCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCCCCCCchhHHHHHHHHHHHH
Confidence            9997532 145677889999999999999999999999999988778999999999988888889999999999999999


Q ss_pred             HHHHHhcCCCcEEEEEeCCcccCCcccCC-CCChh-HHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccccEE
Q 024145          176 CLAAELGQYGIRVNCVSPYGLATGMSMKG-GVDPA-LIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNL  251 (272)
Q Consensus       176 ~la~e~~~~gi~v~~i~Pg~v~t~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i  251 (272)
                      .++.++.++||++++|+||++.|+..... ..... ......    . .....+|+|+|++++++++....+..++..
T Consensus       160 ~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~dvA~~~~~l~~~~~~~~~~~~~  232 (248)
T PRK10538        160 NLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTY----Q-NTVALTPEDVSEAVWWVATLPAHVNINTLE  232 (248)
T ss_pred             HHHHHhcCCCcEEEEEeCCeecccccchhhccCcHHHHHhhc----c-ccCCCCHHHHHHHHHHHhcCCCcccchhhc
Confidence            99999999999999999999985543211 11111 111111    1 134579999999999999876655555443

>PRK05993 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.6e-35  Score=251.13  Aligned_cols=224  Identities=22%  Similarity=0.260  Sum_probs=186.6

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHh-CCccE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKF-GKLDI   92 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~id~   92 (272)
                      .+|++|||||+||||++++++|+++|++|++++|+.+..+++.+   ..+.++.+|++|.++++++++++.+.+ +++|+
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~---~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~   79 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEA---EGLEAFQLDYAEPESIAALVAQVLELSGGRLDA   79 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH---CCceEEEccCCCHHHHHHHHHHHHHHcCCCccE
Confidence            36899999999999999999999999999999998877665543   357889999999999999999987766 68999


Q ss_pred             EEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHHHH
Q 024145           93 MYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILG  172 (272)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~  172 (272)
                      +|||||....  +.+.+.+.++++..+++|+.+++.+++.++|.|.+++.|+||++||..+..+.+....|++||+++++
T Consensus        80 li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~  157 (277)
T PRK05993         80 LFNNGAYGQP--GAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVPMKYRGAYNASKFAIEG  157 (277)
T ss_pred             EEECCCcCCC--CCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCCCCccchHHHHHHHHHH
Confidence            9999998765  67888999999999999999999999999999988888999999999999888999999999999999


Q ss_pred             HHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCC------------hhHHHH---HHhhcCCCCCCCCChHhHHHHHHH
Q 024145          173 LVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVD------------PALIES---SMSQMGNLKGEFLKTDGIANAALY  237 (272)
Q Consensus       173 ~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~------------~~~~~~---~~~~~~~~~~~~~~~~dva~~~~~  237 (272)
                      |+++++.|+.++||++++|+||+++|++.......            .+....   .............+||++++.++.
T Consensus       158 ~~~~l~~el~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~i~~  237 (277)
T PRK05993        158 LSLTLRMELQGSGIHVSLIEPGPIETRFRANALAAFKRWIDIENSVHRAAYQQQMARLEGGGSKSRFKLGPEAVYAVLLH  237 (277)
T ss_pred             HHHHHHHHhhhhCCEEEEEecCCccCchhhHHHHHHhhhhccccchhHHHHHHHHHHHHhhhhccccCCCHHHHHHHHHH
Confidence            99999999999999999999999999986532100            000000   001111111234689999999999


Q ss_pred             HhcCC
Q 024145          238 LASDE  242 (272)
Q Consensus       238 l~s~~  242 (272)
                      .+...
T Consensus       238 a~~~~  242 (277)
T PRK05993        238 ALTAP  242 (277)
T ss_pred             HHcCC
Confidence            87643

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=100.00  E-value=2e-34  Score=243.65  Aligned_cols=242  Identities=35%  Similarity=0.498  Sum_probs=203.8

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   91 (272)
                      +|++|||||+|+||++++++|+++|++|++++|+.+..+.+.+.+   +.++.++.+|+++.++++.+++++.+.++++|
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   80 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLD   80 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            478999999999999999999999999999999887766665543   45788999999999999999999999888999


Q ss_pred             EEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHHH
Q 024145           92 IMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGIL  171 (272)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~  171 (272)
                      ++||++|....  ....+.+.++++++++.|+.+++.+++.+++.|.+.+.+++|++||..+..+.+.+..|+.+|++++
T Consensus        81 ~vi~~a~~~~~--~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~~~~y~~sk~a~~  158 (255)
T TIGR01963        81 ILVNNAGIQHV--APIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASPFKSAYVAAKHGLI  158 (255)
T ss_pred             EEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCCCCchhHHHHHHHH
Confidence            99999998654  4566778899999999999999999999999998777889999999988888889999999999999


Q ss_pred             HHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCC--------C-hhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCC
Q 024145          172 GLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGV--------D-PALIESSMSQMGNLKGEFLKTDGIANAALYLASDE  242 (272)
Q Consensus       172 ~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~--------~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  242 (272)
                      .+++.++.++.+.||+++.++||++.|++......        . .......+.... ..+.+.+++|+++++++++++.
T Consensus       159 ~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~a~~~~~~~~~~  237 (255)
T TIGR01963       159 GLTKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLPGQ-PTKRFVTVDEVAETALFLASDA  237 (255)
T ss_pred             HHHHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHHHHHHHccC-ccccCcCHHHHHHHHHHHcCcc
Confidence            99999999998889999999999999987532100        0 001111121111 2256899999999999999876


Q ss_pred             CCCccccEEEecCceee
Q 024145          243 SSYVSGQNLVVDGGFSV  259 (272)
Q Consensus       243 ~~~~~G~~i~~dgG~~~  259 (272)
                      ...++|++|.+|||+..
T Consensus       238 ~~~~~g~~~~~~~g~~~  254 (255)
T TIGR01963       238 AAGITGQAIVLDGGWTA  254 (255)
T ss_pred             ccCccceEEEEcCcccc
Confidence            66789999999999763

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=100.00  E-value=3.3e-36  Score=239.49  Aligned_cols=229  Identities=30%  Similarity=0.395  Sum_probs=194.8

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHH--h--CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADK--L--GQDVCYIHCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~--~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (272)
                      ++++||.+++||+.||||++++++|+++|..+.++..+.+..+...+.  +  ...+.|++||+++..+++++++++..+
T Consensus         1 m~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~   80 (261)
T KOG4169|consen    1 MDLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILAT   80 (261)
T ss_pred             CcccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHH
Confidence            467899999999999999999999999999887777666665555432  2  357999999999999999999999999


Q ss_pred             hCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCC---CceEEEEecccccccCCCCchh
Q 024145           87 FGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ---KGCILFTASACTEIAGLGSPAY  163 (272)
Q Consensus        87 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~g~iv~iss~~~~~~~~~~~~Y  163 (272)
                      +|.+|++||+||+..          ..+|++.+++|+.|.++-+..++|+|.++.   +|-||++||..|..|.|-.+.|
T Consensus        81 fg~iDIlINgAGi~~----------dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~pVY  150 (261)
T KOG4169|consen   81 FGTIDILINGAGILD----------DKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVFPVY  150 (261)
T ss_pred             hCceEEEEccccccc----------chhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccchhh
Confidence            999999999999864          367999999999999999999999998763   6789999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHH--hcCCCcEEEEEeCCcccCCcccCCC------CChhHHHHHHhhcCCCCCCCCChHhHHHHH
Q 024145          164 TISKYGILGLVKCLAAE--LGQYGIRVNCVSPYGLATGMSMKGG------VDPALIESSMSQMGNLKGEFLKTDGIANAA  235 (272)
Q Consensus       164 ~~sK~a~~~~~~~la~e--~~~~gi~v~~i~Pg~v~t~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  235 (272)
                      ++||+++..|+|++|..  |.+.||+++++|||++.|++.+...      ...+...+.++..     ...+|.+++..+
T Consensus       151 ~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~~~~~~~~~~~e~~~~~~~~l~~~-----~~q~~~~~a~~~  225 (261)
T KOG4169|consen  151 AASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLAENIDASGGYLEYSDSIKEALERA-----PKQSPACCAINI  225 (261)
T ss_pred             hhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHHHHHHHhcCCcccccHHHHHHHHHc-----ccCCHHHHHHHH
Confidence            99999999999999876  5678999999999999999876431      1122334444433     246899999999


Q ss_pred             HHHhcCCCCCccccEEEecCce
Q 024145          236 LYLASDESSYVSGQNLVVDGGF  257 (272)
Q Consensus       236 ~~l~s~~~~~~~G~~i~~dgG~  257 (272)
                      +-.++.   ..||+.+.+|.|.
T Consensus       226 v~aiE~---~~NGaiw~v~~g~  244 (261)
T KOG4169|consen  226 VNAIEY---PKNGAIWKVDSGS  244 (261)
T ss_pred             HHHHhh---ccCCcEEEEecCc
Confidence            988865   4599999999987

>PRK07041 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9e-35  Score=242.42  Aligned_cols=226  Identities=24%  Similarity=0.308  Sum_probs=187.2

Q ss_pred             EEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh--CCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEeC
Q 024145           19 IITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL--GQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNN   96 (272)
Q Consensus        19 lItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~   96 (272)
                      |||||++|||++++++|+++|++|++++|+++..+...+.+  +.++.++.+|+++++++++++++    .+++|++|||
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----~~~id~li~~   76 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAE----AGPFDHVVIT   76 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHh----cCCCCEEEEC
Confidence            69999999999999999999999999999877766665555  45788999999999999888775    4789999999


Q ss_pred             CCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHHHHHHHH
Q 024145           97 AGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKC  176 (272)
Q Consensus        97 ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~~~~  176 (272)
                      +|....  .++.+.+.+++++++++|+.+++.+++  .+.+  ++.|+||++||..+..+.+....|+.||+++++++++
T Consensus        77 ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~--~~~~--~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~  150 (230)
T PRK07041         77 AADTPG--GPVRALPLAAAQAAMDSKFWGAYRVAR--AARI--APGGSLTFVSGFAAVRPSASGVLQGAINAALEALARG  150 (230)
T ss_pred             CCCCCC--CChhhCCHHHHHHHHHHHHHHHHHHHh--hhhh--cCCeEEEEECchhhcCCCCcchHHHHHHHHHHHHHHH
Confidence            998655  567788999999999999999999999  3444  3568999999999988889999999999999999999


Q ss_pred             HHHHhcCCCcEEEEEeCCcccCCcccCCCC-ChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccccEEEecC
Q 024145          177 LAAELGQYGIRVNCVSPYGLATGMSMKGGV-DPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDG  255 (272)
Q Consensus       177 la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dg  255 (272)
                      ++.|+.+  |++++++||+++|++...... ......+......+. +++.+|+|+++++++++++  .+++|+.+.+||
T Consensus       151 la~e~~~--irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~~~--~~~~G~~~~v~g  225 (230)
T PRK07041        151 LALELAP--VRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLPA-RRVGQPEDVANAILFLAAN--GFTTGSTVLVDG  225 (230)
T ss_pred             HHHHhhC--ceEEEEeecccccHHHHhhhccchHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhcC--CCcCCcEEEeCC
Confidence            9999975  999999999999998653111 111112222222333 6778999999999999974  578999999999


Q ss_pred             ceee
Q 024145          256 GFSV  259 (272)
Q Consensus       256 G~~~  259 (272)
                      |..+
T Consensus       226 g~~~  229 (230)
T PRK07041        226 GHAI  229 (230)
T ss_pred             Ceec
Confidence            9764

>PRK07024 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-34  Score=245.45  Aligned_cols=213  Identities=20%  Similarity=0.229  Sum_probs=185.2

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCC--ceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQ--DVCYIHCDISNEDEVINLVDTAVSKFGKLDI   92 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   92 (272)
                      +|++|||||++|||++++++|+++|++|++++|+.+..++..+++..  ++.++.+|++++++++++++++.++++.+|+
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~   81 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV   81 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            47899999999999999999999999999999998877766665532  6889999999999999999999999999999


Q ss_pred             EEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHHHH
Q 024145           93 MYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILG  172 (272)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~  172 (272)
                      +|||+|..... ....+.+.+++++.+++|+.+++.+++.++|.|.+++.++||++||..+..+.+....|++||++++.
T Consensus        82 lv~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~  160 (257)
T PRK07024         82 VIANAGISVGT-LTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGLPGAGAYSASKAAAIK  160 (257)
T ss_pred             EEECCCcCCCc-cccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCCcchHHHHHHHHH
Confidence            99999986531 22333788999999999999999999999999988888999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCC
Q 024145          173 LVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDE  242 (272)
Q Consensus       173 ~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  242 (272)
                      ++++++.|+.++||++++++||+++|++.....             .+. ..+.+|++++..++..+.+.
T Consensus       161 ~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~-------------~~~-~~~~~~~~~a~~~~~~l~~~  216 (257)
T PRK07024        161 YLESLRVELRPAGVRVVTIAPGYIRTPMTAHNP-------------YPM-PFLMDADRFAARAARAIARG  216 (257)
T ss_pred             HHHHHHHHhhccCcEEEEEecCCCcCchhhcCC-------------CCC-CCccCHHHHHHHHHHHHhCC
Confidence            999999999999999999999999999764210             011 23468999999999988653

>PRK06914 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-34  Score=248.73  Aligned_cols=241  Identities=21%  Similarity=0.333  Sum_probs=198.9

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh-----CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL-----GQDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      +++|++|||||+|+||+++++.|+++|++|++++|+++..++..+.+     +.++.++.+|++|++++++ ++++.+.+
T Consensus         1 ~~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~   79 (280)
T PRK06914          1 MNKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEI   79 (280)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhc
Confidence            36789999999999999999999999999999999887766655433     2468899999999999999 99998889


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhH
Q 024145           88 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISK  167 (272)
Q Consensus        88 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK  167 (272)
                      +++|++|||+|....  +...+.+.+++++.+++|+.+++.+++.++++|.+.+.++||++||..+..+.+++..|+.||
T Consensus        80 ~~id~vv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK  157 (280)
T PRK06914         80 GRIDLLVNNAGYANG--GFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGFPGLSPYVSSK  157 (280)
T ss_pred             CCeeEEEECCccccc--CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCCCCCchhHHhH
Confidence            999999999998765  667788999999999999999999999999999887789999999998888889999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCC-----------hhHHHHHHhhcCCCCCCCCChHhHHHHHH
Q 024145          168 YGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVD-----------PALIESSMSQMGNLKGEFLKTDGIANAAL  236 (272)
Q Consensus       168 ~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~dva~~~~  236 (272)
                      ++++.++++++.|+.++||++++++||+++|++.......           ................++.+|+|+|++++
T Consensus       158 ~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  237 (280)
T PRK06914        158 YALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHINSGSDTFGNPIDVANLIV  237 (280)
T ss_pred             HHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHHHhhhhhccCCHHHHHHHHH
Confidence            9999999999999999999999999999999976531100           00111111111112257789999999999


Q ss_pred             HHhcCCCCCccccEEEecCceee
Q 024145          237 YLASDESSYVSGQNLVVDGGFSV  259 (272)
Q Consensus       237 ~l~s~~~~~~~G~~i~~dgG~~~  259 (272)
                      +++++...   +..++++.|..+
T Consensus       238 ~~~~~~~~---~~~~~~~~~~~~  257 (280)
T PRK06914        238 EIAESKRP---KLRYPIGKGVKL  257 (280)
T ss_pred             HHHcCCCC---CcccccCCchHH
Confidence            99976543   356777766544

>PLN02780 ketoreductase/ oxidoreductase

Probab=100.00  E-value=6.9e-35  Score=254.56  Aligned_cols=211  Identities=23%  Similarity=0.263  Sum_probs=174.6

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh-----CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL-----GQDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      ..||+++|||||+|||++++++|+++|++|++++|+++..+++.+++     +.++..+.+|+++  ++.+.++++.+.+
T Consensus        51 ~~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~l~~~~  128 (320)
T PLN02780         51 KYGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG--DIDEGVKRIKETI  128 (320)
T ss_pred             ccCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC--CcHHHHHHHHHHh
Confidence            36899999999999999999999999999999999998887776654     2367888999985  2333344444444


Q ss_pred             C--CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccc-c-CCCCchh
Q 024145           88 G--KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEI-A-GLGSPAY  163 (272)
Q Consensus        88 g--~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~-~-~~~~~~Y  163 (272)
                      +  ++|++|||||+..+....+.+.+.+++++++++|+.+++.+++.++|.|.+++.|+||++||..+.. + .|....|
T Consensus       129 ~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~p~~~~Y  208 (320)
T PLN02780        129 EGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPSDPLYAVY  208 (320)
T ss_pred             cCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCccchHH
Confidence            4  4669999999865322457788999999999999999999999999999888889999999998864 3 5788999


Q ss_pred             hhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhc
Q 024145          164 TISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLAS  240 (272)
Q Consensus       164 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  240 (272)
                      ++||+++++|+++++.|+.++||+|++|+||+++|++.....             ..  ....+||++|+.++..+.
T Consensus       209 ~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~~~-------------~~--~~~~~p~~~A~~~~~~~~  270 (320)
T PLN02780        209 AATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASIRR-------------SS--FLVPSSDGYARAALRWVG  270 (320)
T ss_pred             HHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCcccccC-------------CC--CCCCCHHHHHHHHHHHhC
Confidence            999999999999999999999999999999999999865100             00  113689999999998774

>PRK05650 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-34  Score=246.96  Aligned_cols=222  Identities=24%  Similarity=0.363  Sum_probs=190.9

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Q 024145           16 KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKFGKLDI   92 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   92 (272)
                      |+++||||+||||++++++|+++|++|++++|+.+..+++.+++   +.++.++.+|++++++++++++++.++++++|+
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~   80 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV   80 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            57999999999999999999999999999999988777665544   457889999999999999999999999999999


Q ss_pred             EEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHHHH
Q 024145           93 MYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILG  172 (272)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~  172 (272)
                      ||||+|....  +.+.+.+.+++++.+++|+.+++.+++.++|+|.+.+.++||++||..+..+.++...|+++|+++++
T Consensus        81 lI~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~  158 (270)
T PRK05650         81 IVNNAGVASG--GFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQGPAMSSYNVAKAGVVA  158 (270)
T ss_pred             EEECCCCCCC--CCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCCCCchHHHHHHHHHHH
Confidence            9999998765  67788899999999999999999999999999988778999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcC
Q 024145          173 LVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASD  241 (272)
Q Consensus       173 ~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  241 (272)
                      ++++++.|+.+.||++++|+||+++|++...................  .....+++|+|+.++..+.+
T Consensus       159 ~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~vA~~i~~~l~~  225 (270)
T PRK05650        159 LSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQVGKLL--EKSPITAADIADYIYQQVAK  225 (270)
T ss_pred             HHHHHHHHhcccCcEEEEEecCccccCcccccccCchhHHHHHHHHh--hcCCCCHHHHHHHHHHHHhC
Confidence            99999999999999999999999999987643222222122111111  13457999999999998865

>PRK05855 short chain dehydrogenase; Validated

Probab=100.00  E-value=1e-34  Score=272.62  Aligned_cols=229  Identities=29%  Similarity=0.393  Sum_probs=194.9

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (272)
                      ...++++++|||||++|||++++++|+++|++|++++|+.+..+++.+.+   +.++.++.+|++|+++++++++++.++
T Consensus       310 ~~~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  389 (582)
T PRK05855        310 RGPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAE  389 (582)
T ss_pred             cccCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHh
Confidence            34567899999999999999999999999999999999987777665544   457899999999999999999999999


Q ss_pred             hCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCC-CceEEEEecccccccCCCCchhhh
Q 024145           87 FGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ-KGCILFTASACTEIAGLGSPAYTI  165 (272)
Q Consensus        87 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~Y~~  165 (272)
                      +|++|+||||||....  +++.+.+.+++++++++|+.+++.++++++|+|.+++ .|+||++||..+..+.++...|++
T Consensus       390 ~g~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~  467 (582)
T PRK05855        390 HGVPDIVVNNAGIGMA--GGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPAYAT  467 (582)
T ss_pred             cCCCcEEEECCccCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCCCcHHHH
Confidence            9999999999998765  6788899999999999999999999999999998765 589999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCC---ChhHH---HHHHhhcCCCCCCCCChHhHHHHHHHHh
Q 024145          166 SKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGV---DPALI---ESSMSQMGNLKGEFLKTDGIANAALYLA  239 (272)
Q Consensus       166 sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~---~~~~~---~~~~~~~~~~~~~~~~~~dva~~~~~l~  239 (272)
                      ||+|+++++++++.|+.++||+|++|+||+++|++......   ..+..   .......  ...+..+||++|+.+++.+
T Consensus       468 sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~p~~va~~~~~~~  545 (582)
T PRK05855        468 SKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATTRFAGADAEDEARRRGRADKL--YQRRGYGPEKVAKAIVDAV  545 (582)
T ss_pred             HHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhccccCCcccchhhhHHhhhhhh--ccccCCCHHHHHHHHHHHH
Confidence            99999999999999999999999999999999998764321   11110   1111111  1134468999999999998


Q ss_pred             cCC
Q 024145          240 SDE  242 (272)
Q Consensus       240 s~~  242 (272)
                      +..
T Consensus       546 ~~~  548 (582)
T PRK05855        546 KRN  548 (582)
T ss_pred             HcC
Confidence            754

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=100.00  E-value=1.4e-34  Score=242.04  Aligned_cols=222  Identities=23%  Similarity=0.217  Sum_probs=183.0

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcC--CeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           16 KVAIITGGASGIGAMAVELFHENG--AKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      +++|||||++|||++++++|+++|  +.|++..|+....     ....++.++++|+++.++++++    .++++++|++
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~-----~~~~~~~~~~~Dls~~~~~~~~----~~~~~~id~l   71 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD-----FQHDNVQWHALDVTDEAEIKQL----SEQFTQLDWL   71 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc-----cccCceEEEEecCCCHHHHHHH----HHhcCCCCEE
Confidence            479999999999999999999985  5666666654321     1135788999999999998774    4456789999


Q ss_pred             EeCCCCCCCC----CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccc---cCCCCchhhhh
Q 024145           94 YNNAGILDRS----FGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEI---AGLGSPAYTIS  166 (272)
Q Consensus        94 v~~ag~~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~---~~~~~~~Y~~s  166 (272)
                      |||+|.....    ...+.+.+.+.+++.+++|+.+++.+++.++|.|.+++.++++++||..+..   +.+++..|+++
T Consensus        72 i~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~~~~~~~~~~~Y~as  151 (235)
T PRK09009         72 INCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSISDNRLGGWYSYRAS  151 (235)
T ss_pred             EECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecccccccCCCCCcchhhhh
Confidence            9999986431    2456778889999999999999999999999999887778999999865533   34567799999


Q ss_pred             HHHHHHHHHHHHHHhcC--CCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCC
Q 024145          167 KYGILGLVKCLAAELGQ--YGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESS  244 (272)
Q Consensus       167 K~a~~~~~~~la~e~~~--~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  244 (272)
                      |+++++|+++++.|+.+  +||+|++|+||+++|++.....           ...+. +++.+|||+++.+++++++...
T Consensus       152 K~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~~-----------~~~~~-~~~~~~~~~a~~~~~l~~~~~~  219 (235)
T PRK09009        152 KAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPFQ-----------QNVPK-GKLFTPEYVAQCLLGIIANATP  219 (235)
T ss_pred             HHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcchh-----------hcccc-CCCCCHHHHHHHHHHHHHcCCh
Confidence            99999999999999987  6999999999999999975210           11122 5678999999999999999888


Q ss_pred             CccccEEEecCcee
Q 024145          245 YVSGQNLVVDGGFS  258 (272)
Q Consensus       245 ~~~G~~i~~dgG~~  258 (272)
                      +++|+++.+|||..
T Consensus       220 ~~~g~~~~~~g~~~  233 (235)
T PRK09009        220 AQSGSFLAYDGETL  233 (235)
T ss_pred             hhCCcEEeeCCcCC
Confidence            99999999999864

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=100.00  E-value=1.8e-34  Score=251.67  Aligned_cols=239  Identities=19%  Similarity=0.174  Sum_probs=188.2

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcC-CeEEEeecCcchHHHHHHHhC---CceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENG-AKVVIADVQDKLGEDLADKLG---QDVCYIHCDISNEDEVINLVDTAVSKFGK   89 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (272)
                      .+|++|||||++|||++++++|+++| ++|++++|+.+..+++.+++.   ..+.++.+|+++.++++++++++.+.+++
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   81 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRP   81 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            57899999999999999999999999 999999999887777666653   46788999999999999999999888899


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCC--CceEEEEeccccccc-----------
Q 024145           90 LDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ--KGCILFTASACTEIA-----------  156 (272)
Q Consensus        90 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~g~iv~iss~~~~~~-----------  156 (272)
                      +|++|||||+..+. .+..+.+.++|++++++|+.+++.+++.++|+|.+++  .|+||++||..+..+           
T Consensus        82 iD~lI~nAG~~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~  160 (314)
T TIGR01289        82 LDALVCNAAVYFPT-AKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKAN  160 (314)
T ss_pred             CCEEEECCCccccC-ccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCccc
Confidence            99999999975431 2345678899999999999999999999999998753  589999999876421           


Q ss_pred             ----------------------CCCCchhhhhHHHHHHHHHHHHHHhc-CCCcEEEEEeCCcc-cCCcccCCCCChhHHH
Q 024145          157 ----------------------GLGSPAYTISKYGILGLVKCLAAELG-QYGIRVNCVSPYGL-ATGMSMKGGVDPALIE  212 (272)
Q Consensus       157 ----------------------~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~i~Pg~v-~t~~~~~~~~~~~~~~  212 (272)
                                            ..++..|++||+|+..+++.+++++. ++||++++|+||++ +|++.+..........
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~~~~~~~~~  240 (314)
T TIGR01289       161 LGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREHVPLFRTLF  240 (314)
T ss_pred             ccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccccHHHHHHH
Confidence                                  12346799999999999999999985 46999999999999 6998763111111111


Q ss_pred             HHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccccEEEecC
Q 024145          213 SSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDG  255 (272)
Q Consensus       213 ~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dg  255 (272)
                      .......  ...+.+|++.+..+++++.+.....+|.++..++
T Consensus       241 ~~~~~~~--~~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~~~~  281 (314)
T TIGR01289       241 PPFQKYI--TKGYVSEEEAGERLAQVVSDPKLKKSGVYWSWGN  281 (314)
T ss_pred             HHHHHHH--hccccchhhhhhhhHHhhcCcccCCCceeeecCC
Confidence            1111111  1346789999999999887654445787775433

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK09135 pteridine reductase; Provisional

Probab=100.00  E-value=1.2e-33  Score=238.08  Aligned_cols=240  Identities=28%  Similarity=0.368  Sum_probs=196.8

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcc-hHHHHHHHh----CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDK-LGEDLADKL----GQDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~-~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      +++|++|||||+|+||++++++|+++|++|++++|+.. ..+...+.+    +..+.++.+|+++.++++++++++.+++
T Consensus         4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   83 (249)
T PRK09135          4 DSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAF   83 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            46799999999999999999999999999999998643 333333222    3468899999999999999999999999


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhH
Q 024145           88 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISK  167 (272)
Q Consensus        88 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK  167 (272)
                      +++|++|||+|....  .++.+.+.++++..+++|+.+++.+++++.+.+.++ .+.++++++..+..+.++...|+.||
T Consensus        84 ~~~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Y~~sK  160 (249)
T PRK09135         84 GRLDALVNNASSFYP--TPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQ-RGAIVNITDIHAERPLKGYPVYCAAK  160 (249)
T ss_pred             CCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhC-CeEEEEEeChhhcCCCCCchhHHHHH
Confidence            999999999998655  556677889999999999999999999999988653 57888888887777888889999999


Q ss_pred             HHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCcc
Q 024145          168 YGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVS  247 (272)
Q Consensus       168 ~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  247 (272)
                      ++++.+++.++.++.+ ++++++++||++.||+.....  +...........+. ..+.+++|+++++.+++.+ ....+
T Consensus       161 ~~~~~~~~~l~~~~~~-~i~~~~v~pg~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~d~a~~~~~~~~~-~~~~~  235 (249)
T PRK09135        161 AALEMLTRSLALELAP-EVRVNAVAPGAILWPEDGNSF--DEEARQAILARTPL-KRIGTPEDIAEAVRFLLAD-ASFIT  235 (249)
T ss_pred             HHHHHHHHHHHHHHCC-CCeEEEEEeccccCccccccC--CHHHHHHHHhcCCc-CCCcCHHHHHHHHHHHcCc-ccccc
Confidence            9999999999999975 799999999999999864321  22222222222232 5667899999999888865 45679


Q ss_pred             ccEEEecCceeec
Q 024145          248 GQNLVVDGGFSVV  260 (272)
Q Consensus       248 G~~i~~dgG~~~~  260 (272)
                      |+.|.+++|...+
T Consensus       236 g~~~~i~~g~~~~  248 (249)
T PRK09135        236 GQILAVDGGRSLT  248 (249)
T ss_pred             CcEEEECCCeecc
Confidence            9999999998653

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=100.00  E-value=8.1e-34  Score=239.70  Aligned_cols=239  Identities=36%  Similarity=0.545  Sum_probs=198.1

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcch--HHHHHHHhC----CceEEEEecCCC-HHHHHHHHHHHH
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKL--GEDLADKLG----QDVCYIHCDISN-EDEVINLVDTAV   84 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~--~~~~~~~~~----~~~~~~~~D~~~-~~~~~~~~~~~~   84 (272)
                      .+++|++|||||++|||+++++.|+++|++|+++.|+...  .+...+...    ..+.+..+|+++ .++++.+++.+.
T Consensus         2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~   81 (251)
T COG1028           2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAE   81 (251)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHH
Confidence            4688999999999999999999999999998888877654  344444444    478888999998 999999999999


Q ss_pred             HHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCC-Cchh
Q 024145           85 SKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLG-SPAY  163 (272)
Q Consensus        85 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~-~~~Y  163 (272)
                      +.+|++|++|||||..... .++.+.+.+++++++++|+.+++.+++.+.|++.++   +||++||..+. +.++ +..|
T Consensus        82 ~~~g~id~lvnnAg~~~~~-~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~---~Iv~isS~~~~-~~~~~~~~Y  156 (251)
T COG1028          82 EEFGRIDILVNNAGIAGPD-APLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQ---RIVNISSVAGL-GGPPGQAAY  156 (251)
T ss_pred             HHcCCCCEEEECCCCCCCC-CChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhC---eEEEECCchhc-CCCCCcchH
Confidence            9999999999999987541 268888999999999999999999999888888733   99999999998 7777 4999


Q ss_pred             hhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChh-HHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCC
Q 024145          164 TISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPA-LIESSMSQMGNLKGEFLKTDGIANAALYLASDE  242 (272)
Q Consensus       164 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  242 (272)
                      ++||+|+++|+++++.|+.++||++++|+||+++|++......... ......... +. .++..|++++..+.++.+..
T Consensus       157 ~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~  234 (251)
T COG1028         157 AASKAALIGLTKALALELAPRGIRVNAVAPGYIDTPMTAALESAELEALKRLAARI-PL-GRLGTPEEVAAAVAFLASDE  234 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCcchhhhhhhhhhHHHHHHhcC-CC-CCCcCHHHHHHHHHHHcCcc
Confidence            9999999999999999999999999999999999999874322110 011111111 22 47888999999999887663


Q ss_pred             -CCCccccEEEecCce
Q 024145          243 -SSYVSGQNLVVDGGF  257 (272)
Q Consensus       243 -~~~~~G~~i~~dgG~  257 (272)
                       ..+++|+.+.+|||.
T Consensus       235 ~~~~~~g~~~~~~~~~  250 (251)
T COG1028         235 AASYITGQTLPVDGGL  250 (251)
T ss_pred             hhccccCCEEEeCCCC
Confidence             678999999999885

>PRK07775 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-33  Score=242.10  Aligned_cols=229  Identities=22%  Similarity=0.326  Sum_probs=190.3

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      ++..|+++||||+++||++++++|+++|++|++++|+.+..++..+.+   +.++.++.+|+++.++++++++++.+.++
T Consensus         7 ~~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   86 (274)
T PRK07775          7 HPDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALG   86 (274)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            456789999999999999999999999999999999876665554433   45788999999999999999999999889


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHH
Q 024145           89 KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKY  168 (272)
Q Consensus        89 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~  168 (272)
                      ++|++|||+|....  ....+.+.+++++.+++|+.+++.+++++++.|.++..++||++||..+..+.+....|+.+|+
T Consensus        87 ~id~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  164 (274)
T PRK07775         87 EIEVLVSGAGDTYF--GKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRPHMGAYGAAKA  164 (274)
T ss_pred             CCCEEEECCCcCCC--cccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCcchHHHHHH
Confidence            99999999998654  5677788999999999999999999999999998777899999999988888888889999999


Q ss_pred             HHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCC--hhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCC
Q 024145          169 GILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVD--PALIESSMSQMGNLKGEFLKTDGIANAALYLASDE  242 (272)
Q Consensus       169 a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  242 (272)
                      +++.++++++.++.+.||++++++||+++|++.......  ...............+++.+++|++++++++++..
T Consensus       165 a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~~~~~~  240 (274)
T PRK07775        165 GLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAKWGQARHDYFLRASDLARAITFVAETP  240 (274)
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHHhcccccccccCHHHHHHHHHHHhcCC
Confidence            999999999999998999999999999999865421110  01111111111112256899999999999999754

>PRK06194 hypothetical protein; Provisional

Probab=100.00  E-value=2.6e-34  Score=247.46  Aligned_cols=228  Identities=27%  Similarity=0.387  Sum_probs=189.2

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+..++..+++   +.++.++.+|++|.++++++++.+.+++
T Consensus         2 ~~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~   81 (287)
T PRK06194          2 KDFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERF   81 (287)
T ss_pred             cCCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4578899999999999999999999999999999999877666665554   4468889999999999999999999999


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCC------ceEEEEecccccccCCCCc
Q 024145           88 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQK------GCILFTASACTEIAGLGSP  161 (272)
Q Consensus        88 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~------g~iv~iss~~~~~~~~~~~  161 (272)
                      +++|+||||||....  .++.+.+.+++++.+++|+.+++.++++++|.|.++..      |+||++||..+..+.+...
T Consensus        82 g~id~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~  159 (287)
T PRK06194         82 GAVHLLFNNAGVGAG--GLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPAMG  159 (287)
T ss_pred             CCCCEEEECCCCCCC--CCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCc
Confidence            999999999998765  66778899999999999999999999999999987644      7999999999998888999


Q ss_pred             hhhhhHHHHHHHHHHHHHHhcC--CCcEEEEEeCCcccCCcccCCCCChhH-------------HHHHHhhcCCCCCCCC
Q 024145          162 AYTISKYGILGLVKCLAAELGQ--YGIRVNCVSPYGLATGMSMKGGVDPAL-------------IESSMSQMGNLKGEFL  226 (272)
Q Consensus       162 ~Y~~sK~a~~~~~~~la~e~~~--~gi~v~~i~Pg~v~t~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~  226 (272)
                      .|++||++++.++++++.|+..  .+|+++.++||+++|++.......+..             ..+.......  ....
T Consensus       160 ~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~  237 (287)
T PRK06194        160 IYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQSERNRPADLANTAPPTRSQLIAQAMSQKAVG--SGKV  237 (287)
T ss_pred             chHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccccccccCchhcccCccccchhhHHHHHHHhhhh--ccCC
Confidence            9999999999999999999874  579999999999999987532111100             0111111111  1236


Q ss_pred             ChHhHHHHHHHHhcCC
Q 024145          227 KTDGIANAALYLASDE  242 (272)
Q Consensus       227 ~~~dva~~~~~l~s~~  242 (272)
                      +++|+|+.++.++...
T Consensus       238 s~~dva~~i~~~~~~~  253 (287)
T PRK06194        238 TAEEVAQLVFDAIRAG  253 (287)
T ss_pred             CHHHHHHHHHHHHHcC
Confidence            9999999999977543

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=8.1e-34  Score=238.10  Aligned_cols=219  Identities=27%  Similarity=0.470  Sum_probs=191.1

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      .++++|+++|||++++||++++++|+++|++|++++|+++..++..+++   +.++.++.+|++++++++++++++.+++
T Consensus         3 ~~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (239)
T PRK07666          3 QSLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNEL   82 (239)
T ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4467899999999999999999999999999999999887766555443   4578899999999999999999999999


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhH
Q 024145           88 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISK  167 (272)
Q Consensus        88 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK  167 (272)
                      +++|++|||+|....  ..+.+.+++++++.+++|+.+++.+++.+.+++.++..+++|++||..+..+.++...|+.+|
T Consensus        83 ~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK  160 (239)
T PRK07666         83 GSIDILINNAGISKF--GKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAAVTSAYSASK  160 (239)
T ss_pred             CCccEEEEcCccccC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCCCCCcchHHHH
Confidence            999999999998654  567788999999999999999999999999999887889999999999999888899999999


Q ss_pred             HHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCC
Q 024145          168 YGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDE  242 (272)
Q Consensus       168 ~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  242 (272)
                      ++++.+++.++.|+.++||+++.|+||++.|++.....         ... .. ...+.+++|+++.++.+++..
T Consensus       161 ~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~---------~~~-~~-~~~~~~~~~~a~~~~~~l~~~  224 (239)
T PRK07666        161 FGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDLG---------LTD-GN-PDKVMQPEDLAEFIVAQLKLN  224 (239)
T ss_pred             HHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhcc---------ccc-cC-CCCCCCHHHHHHHHHHHHhCC
Confidence            99999999999999999999999999999999865211         000 11 145688999999999998754

>PRK09072 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.5e-34  Score=243.11  Aligned_cols=219  Identities=22%  Similarity=0.329  Sum_probs=189.8

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh--CCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL--GQDVCYIHCDISNEDEVINLVDTAVSKFGK   89 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (272)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+..+++.+++  +.++.++.+|++|+++++++++.+.+ +++
T Consensus         2 ~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~-~~~   80 (263)
T PRK09072          2 DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARARE-MGG   80 (263)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHh-cCC
Confidence            468899999999999999999999999999999999987776666554  45788999999999999999998876 789


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHH
Q 024145           90 LDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYG  169 (272)
Q Consensus        90 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a  169 (272)
                      +|++|||+|....  .++.+.+.+++++.+++|+.+++.+++.++++|.+++.++||++||..+..+.++...|+.+|++
T Consensus        81 id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  158 (263)
T PRK09072         81 INVLINNAGVNHF--ALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYPGYASYCASKFA  158 (263)
T ss_pred             CCEEEECCCCCCc--cccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCCCccHHHHHHHH
Confidence            9999999998654  66788899999999999999999999999999988778999999999998888999999999999


Q ss_pred             HHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCC
Q 024145          170 ILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDE  242 (272)
Q Consensus       170 ~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  242 (272)
                      +.+++++++.|+.++||+++.++||+++|++.....   .   ...   ..+..+..+|+|+|+.+++++...
T Consensus       159 ~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~~---~---~~~---~~~~~~~~~~~~va~~i~~~~~~~  222 (263)
T PRK09072        159 LRGFSEALRRELADTGVRVLYLAPRATRTAMNSEAV---Q---ALN---RALGNAMDDPEDVAAAVLQAIEKE  222 (263)
T ss_pred             HHHHHHHHHHHhcccCcEEEEEecCcccccchhhhc---c---ccc---ccccCCCCCHHHHHHHHHHHHhCC
Confidence            999999999999999999999999999998754210   0   000   011135678999999999999754

>PRK06179 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.1e-34  Score=244.18  Aligned_cols=222  Identities=22%  Similarity=0.271  Sum_probs=187.8

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      ++|+++||||+||||++++++|+++|++|++++|+.+..+.     ..++.++++|++|+++++++++.+.++++++|+|
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~-----~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~l   77 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP-----IPGVELLELDVTDDASVQAAVDEVIARAGRIDVL   77 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc-----cCCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEE
Confidence            46899999999999999999999999999999998654321     2467899999999999999999999999999999


Q ss_pred             EeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHHHHH
Q 024145           94 YNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGL  173 (272)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~  173 (272)
                      |||+|....  +.+.+.+.+++++.+++|+.+++.+++.++++|.+++.++||++||..+..+.+....|++||++++.+
T Consensus        78 i~~ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~  155 (270)
T PRK06179         78 VNNAGVGLA--GAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPAPYMALYAASKHAVEGY  155 (270)
T ss_pred             EECCCCCCC--cCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCCCCccHHHHHHHHHHHH
Confidence            999998765  677888999999999999999999999999999988889999999999988889999999999999999


Q ss_pred             HHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChh------HHHH-HHhhcCCCCCCCCChHhHHHHHHHHhcCC
Q 024145          174 VKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPA------LIES-SMSQMGNLKGEFLKTDGIANAALYLASDE  242 (272)
Q Consensus       174 ~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~------~~~~-~~~~~~~~~~~~~~~~dva~~~~~l~s~~  242 (272)
                      ++.++.|++++||++++|+||+++|++.........      .... ..........+..+|+++++.++++++..
T Consensus       156 ~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~~~~~  231 (270)
T PRK06179        156 SESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERAVVSKAVAKAVKKADAPEVVADTVVKAALGP  231 (270)
T ss_pred             HHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhhHHHHHHHHHHHHhccccCCCHHHHHHHHHHHHcCC
Confidence            999999999999999999999999998764321110      0000 01111111245678999999999998764

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=100.00  E-value=1.5e-33  Score=236.04  Aligned_cols=234  Identities=32%  Similarity=0.525  Sum_probs=198.3

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCCeEEEeecCc-chHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           18 AIITGGASGIGAMAVELFHENGAKVVIADVQD-KLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        18 vlItGas~giG~aia~~la~~G~~V~~~~r~~-~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      +||||++++||++++++|+++|++|++++|+. +..+...+.+   +.++.++.+|++|+++++++++.+.+.++++|++
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL   80 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            58999999999999999999999999998875 3333333332   4568899999999999999999999999999999


Q ss_pred             EeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHHHHH
Q 024145           94 YNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGL  173 (272)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~  173 (272)
                      ||++|....  ..+.+.+.+++++.+++|+.+++.+++.+.+++.+++.++++++||..+..+.+.+..|+.+|++++.+
T Consensus        81 i~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~~~~~y~~~k~a~~~~  158 (239)
T TIGR01830        81 VNNAGITRD--NLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNAGQANYAASKAGVIGF  158 (239)
T ss_pred             EECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCCchhHHHHHHHHHH
Confidence            999998654  456777889999999999999999999999998776778999999998888889999999999999999


Q ss_pred             HHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccccEEEe
Q 024145          174 VKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVV  253 (272)
Q Consensus       174 ~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~  253 (272)
                      ++.++.++.+.|++++.++||+++|++...  .. ...........+. +++.+++|+++.+++++.+...+.+|+++++
T Consensus       159 ~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~--~~-~~~~~~~~~~~~~-~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~  234 (239)
T TIGR01830       159 TKSLAKELASRNITVNAVAPGFIDTDMTDK--LS-EKVKKKILSQIPL-GRFGTPEEVANAVAFLASDEASYITGQVIHV  234 (239)
T ss_pred             HHHHHHHHhhcCeEEEEEEECCCCChhhhh--cC-hHHHHHHHhcCCc-CCCcCHHHHHHHHHHHhCcccCCcCCCEEEe
Confidence            999999999899999999999999987652  11 2222222223333 6788999999999999987777899999999


Q ss_pred             cCce
Q 024145          254 DGGF  257 (272)
Q Consensus       254 dgG~  257 (272)
                      |+|+
T Consensus       235 ~~g~  238 (239)
T TIGR01830       235 DGGM  238 (239)
T ss_pred             CCCc
Confidence            9986

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK07806 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-34  Score=243.98  Aligned_cols=234  Identities=23%  Similarity=0.252  Sum_probs=186.4

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcc-hHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDK-LGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~-~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (272)
                      .++++|+++||||+||||++++++|+++|++|++++|+.. ..+.+.+++   +.++.++.+|++++++++++++++.++
T Consensus         2 ~~~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (248)
T PRK07806          2 GDLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREE   81 (248)
T ss_pred             CCCCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence            3478899999999999999999999999999999888753 334343333   456889999999999999999999998


Q ss_pred             hCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccccc-----ccCCCCc
Q 024145           87 FGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTE-----IAGLGSP  161 (272)
Q Consensus        87 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~-----~~~~~~~  161 (272)
                      ++.+|++|||+|....  .   .   .++...+++|+.+++.+++.+.++|.+  .+++|++||..+.     .+.+.+.
T Consensus        82 ~~~~d~vi~~ag~~~~--~---~---~~~~~~~~vn~~~~~~l~~~~~~~~~~--~~~iv~isS~~~~~~~~~~~~~~~~  151 (248)
T PRK07806         82 FGGLDALVLNASGGME--S---G---MDEDYAMRLNRDAQRNLARAALPLMPA--GSRVVFVTSHQAHFIPTVKTMPEYE  151 (248)
T ss_pred             CCCCcEEEECCCCCCC--C---C---CCcceeeEeeeHHHHHHHHHHHhhccC--CceEEEEeCchhhcCccccCCcccc
Confidence            8999999999986422  1   1   124567899999999999999999853  4799999996543     2334567


Q ss_pred             hhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCC--CChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHh
Q 024145          162 AYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGG--VDPALIESSMSQMGNLKGEFLKTDGIANAALYLA  239 (272)
Q Consensus       162 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  239 (272)
                      .|+.||++++.+++.++.|++++||++++++||++.|++.....  ..+.....   ...+. +++.+|+|+++++++++
T Consensus       152 ~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~dva~~~~~l~  227 (248)
T PRK07806        152 PVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTATLLNRLNPGAIEA---RREAA-GKLYTVSEFAAEVARAV  227 (248)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhhhhccCCHHHHHH---HHhhh-cccCCHHHHHHHHHHHh
Confidence            89999999999999999999999999999999999998654211  11111111   11233 78999999999999999


Q ss_pred             cCCCCCccccEEEecCceeec
Q 024145          240 SDESSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       240 s~~~~~~~G~~i~~dgG~~~~  260 (272)
                      +  +.+++|+.|.++||....
T Consensus       228 ~--~~~~~g~~~~i~~~~~~~  246 (248)
T PRK07806        228 T--APVPSGHIEYVGGADYFL  246 (248)
T ss_pred             h--ccccCccEEEecCcccee
Confidence            7  457799999999998764

>PRK08267 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-33  Score=240.03  Aligned_cols=218  Identities=28%  Similarity=0.366  Sum_probs=188.7

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhC-CceEEEEecCCCHHHHHHHHHHHHHH-hCCccEE
Q 024145           16 KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLG-QDVCYIHCDISNEDEVINLVDTAVSK-FGKLDIM   93 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~-~g~id~l   93 (272)
                      |++|||||++|||++++++|+++|++|++++|+.+..+++.+.++ .++.++++|+++.++++++++.+.++ ++++|+|
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~v   81 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDVL   81 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEE
Confidence            789999999999999999999999999999999888777766653 57899999999999999999988776 7899999


Q ss_pred             EeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHHHHH
Q 024145           94 YNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGL  173 (272)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~  173 (272)
                      |||||....  ..+.+.+.+++++++++|+.+++.+++++.++|.+++.++||++||..+..+.+....|+.||++++++
T Consensus        82 i~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~  159 (260)
T PRK08267         82 FNNAGILRG--GPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQPGLAVYSATKFAVRGL  159 (260)
T ss_pred             EECCCCCCC--CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCCchhhHHHHHHHHHH
Confidence            999998765  667888999999999999999999999999999887889999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcC
Q 024145          174 VKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASD  241 (272)
Q Consensus       174 ~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  241 (272)
                      +++++.++.++||++++|+||+++|++....  ...........   . +...+|+|++.+++.++..
T Consensus       160 ~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~--~~~~~~~~~~~---~-~~~~~~~~va~~~~~~~~~  221 (260)
T PRK08267        160 TEALDLEWRRHGIRVADVMPLFVDTAMLDGT--SNEVDAGSTKR---L-GVRLTPEDVAEAVWAAVQH  221 (260)
T ss_pred             HHHHHHHhcccCcEEEEEecCCcCCcccccc--cchhhhhhHhh---c-cCCCCHHHHHHHHHHHHhC
Confidence            9999999999999999999999999987631  11111111111   1 3346899999999998854

>PRK06482 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-33  Score=240.17  Aligned_cols=238  Identities=23%  Similarity=0.316  Sum_probs=198.2

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEE
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMY   94 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv   94 (272)
                      .|++|||||+||||++++++|+++|++|++++|+++..+.+.+..+.++.++.+|++|.++++++++++.+.++++|+||
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi   81 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVV   81 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            37899999999999999999999999999999998777777666666889999999999999999999999889999999


Q ss_pred             eCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHHHHHH
Q 024145           95 NNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLV  174 (272)
Q Consensus        95 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~~  174 (272)
                      ||+|....  ++..+.+.+++++.+++|+.+++.++++++|+|.+++.++||++||..+..+.++...|+.||++++.++
T Consensus        82 ~~ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~  159 (276)
T PRK06482         82 SNAGYGLF--GAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIAYPGFSLYHATKWGIEGFV  159 (276)
T ss_pred             ECCCCCCC--cccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccCCCCCchhHHHHHHHHHHH
Confidence            99998765  5677788999999999999999999999999998777899999999988888889999999999999999


Q ss_pred             HHHHHHhcCCCcEEEEEeCCcccCCcccCCCCC------hh----HHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCC
Q 024145          175 KCLAAELGQYGIRVNCVSPYGLATGMSMKGGVD------PA----LIESSMSQMGNLKGEFLKTDGIANAALYLASDESS  244 (272)
Q Consensus       175 ~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~------~~----~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  244 (272)
                      ++++.++.++||+++.++||.+.|++.......      ..    ...+.+.. .+. .-..+++|++++++.++.... 
T Consensus       160 ~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~d~~~~~~a~~~~~~~~~-  236 (276)
T PRK06482        160 EAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALAD-GSF-AIPGDPQKMVQAMIASADQTP-  236 (276)
T ss_pred             HHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhh-ccC-CCCCCHHHHHHHHHHHHcCCC-
Confidence            999999999999999999999999875421110      00    11111111 111 234689999999998886432 


Q ss_pred             CccccEEEecCceee
Q 024145          245 YVSGQNLVVDGGFSV  259 (272)
Q Consensus       245 ~~~G~~i~~dgG~~~  259 (272)
                        .+..+++..|...
T Consensus       237 --~~~~~~~g~~~~~  249 (276)
T PRK06482        237 --APRRLTLGSDAYA  249 (276)
T ss_pred             --CCeEEecChHHHH
Confidence              3566888777554

>PRK07904 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.9e-34  Score=240.38  Aligned_cols=211  Identities=23%  Similarity=0.287  Sum_probs=177.7

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcC-CeEEEeecCcch-HHHHHHHh---C-CceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENG-AKVVIADVQDKL-GEDLADKL---G-QDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G-~~V~~~~r~~~~-~~~~~~~~---~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      ++|+++||||++|||++++++|+++| ++|++++|+.+. .+++.+++   + .+++++++|++|.++++++++++.+ +
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~-~   85 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA-G   85 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh-c
Confidence            56899999999999999999999995 899999998875 66555544   2 3689999999999999999998876 4


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhH
Q 024145           88 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISK  167 (272)
Q Consensus        88 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK  167 (272)
                      +++|++|||+|.....  .....+.++..+.+++|+.+++.+++.++|.|.+++.++||++||..+..+.++...|++||
T Consensus        86 g~id~li~~ag~~~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~~~~~~~Y~~sK  163 (253)
T PRK07904         86 GDVDVAIVAFGLLGDA--EELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERVRRSNFVYGSTK  163 (253)
T ss_pred             CCCCEEEEeeecCCch--hhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCCCCCCcchHHHH
Confidence            8999999999986431  11122455667889999999999999999999988889999999998877778888999999


Q ss_pred             HHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCC
Q 024145          168 YGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDE  242 (272)
Q Consensus       168 ~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  242 (272)
                      +|+.+|+++++.|+.++||++++++||+++|++.....              .. ....+|+|+|+.++..+.+.
T Consensus       164 aa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~~--------------~~-~~~~~~~~~A~~i~~~~~~~  223 (253)
T PRK07904        164 AGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAHAK--------------EA-PLTVDKEDVAKLAVTAVAKG  223 (253)
T ss_pred             HHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhccCC--------------CC-CCCCCHHHHHHHHHHHHHcC
Confidence            99999999999999999999999999999999875211              00 12368999999999988653

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=3.9e-34  Score=224.16  Aligned_cols=187  Identities=22%  Similarity=0.284  Sum_probs=172.2

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   91 (272)
                      .++|.++|||||++|||++++++|.+.|.+|++++|+++.+++..++. ..+....||+.|.++.++++++++++++.++
T Consensus         2 k~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~-p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lN   80 (245)
T COG3967           2 KTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAEN-PEIHTEVCDVADRDSRRELVEWLKKEYPNLN   80 (245)
T ss_pred             cccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcC-cchheeeecccchhhHHHHHHHHHhhCCchh
Confidence            468999999999999999999999999999999999999998887765 4688999999999999999999999999999


Q ss_pred             EEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHHH
Q 024145           92 IMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGIL  171 (272)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~  171 (272)
                      +||||||+.....-.-.+.+.++.++.+.+|+.+++.+++.++|++.+++.+.||++||..+..|....+.||++|+|+.
T Consensus        81 vliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~~~PvYcaTKAaiH  160 (245)
T COG3967          81 VLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMASTPVYCATKAAIH  160 (245)
T ss_pred             eeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCcccccccchhhHHHHH
Confidence            99999999865221223556777889999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCCcEEEEEeCCcccCC
Q 024145          172 GLVKCLAAELGQYGIRVNCVSPYGLATG  199 (272)
Q Consensus       172 ~~~~~la~e~~~~gi~v~~i~Pg~v~t~  199 (272)
                      +|+.+|...+...+|.|..+.|-.|+|+
T Consensus       161 syt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         161 SYTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             HHHHHHHHHhhhcceEEEEecCCceecC
Confidence            9999999999888999999999999996

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.7e-33  Score=233.79  Aligned_cols=233  Identities=22%  Similarity=0.349  Sum_probs=194.4

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhC--CceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLG--QDVCYIHCDISNEDEVINLVDTAVSKFGK   89 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (272)
                      ++++|+++||||+++||.++++.|+++|++|++++|+++..+.+.+.+.  .++.++.+|++++++++++++++...+++
T Consensus         2 ~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   81 (238)
T PRK05786          2 RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNA   81 (238)
T ss_pred             CcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            4689999999999999999999999999999999998877766544442  36889999999999999999999888889


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccc-cCCCCchhhhhHH
Q 024145           90 LDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEI-AGLGSPAYTISKY  168 (272)
Q Consensus        90 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~-~~~~~~~Y~~sK~  168 (272)
                      +|.+|+++|....  .+..  ..+++++.+++|+.+++.+++.++|.+.+  .+++|++||..+.. +.+....|+.||+
T Consensus        82 id~ii~~ag~~~~--~~~~--~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~ss~~~~~~~~~~~~~Y~~sK~  155 (238)
T PRK05786         82 IDGLVVTVGGYVE--DTVE--EFSGLEEMLTNHIKIPLYAVNASLRFLKE--GSSIVLVSSMSGIYKASPDQLSYAVAKA  155 (238)
T ss_pred             CCEEEEcCCCcCC--CchH--HHHHHHHHHHHhchHHHHHHHHHHHHHhc--CCEEEEEecchhcccCCCCchHHHHHHH
Confidence            9999999986533  2222  23889999999999999999999999854  58899999987643 5667788999999


Q ss_pred             HHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccc
Q 024145          169 GILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSG  248 (272)
Q Consensus       169 a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  248 (272)
                      +++.+++.++.++.++||+++.|+||+++|++...     ..    +...........+++|+++.+++++++....++|
T Consensus       156 ~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~-----~~----~~~~~~~~~~~~~~~~va~~~~~~~~~~~~~~~g  226 (238)
T PRK05786        156 GLAKAVEILASELLGRGIRVNGIAPTTISGDFEPE-----RN----WKKLRKLGDDMAPPEDFAKVIIWLLTDEADWVDG  226 (238)
T ss_pred             HHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCch-----hh----hhhhccccCCCCCHHHHHHHHHHHhcccccCccC
Confidence            99999999999999899999999999999987431     11    1111122234678999999999999988888999


Q ss_pred             cEEEecCceee
Q 024145          249 QNLVVDGGFSV  259 (272)
Q Consensus       249 ~~i~~dgG~~~  259 (272)
                      +.+.+|||..+
T Consensus       227 ~~~~~~~~~~~  237 (238)
T PRK05786        227 VVIPVDGGARL  237 (238)
T ss_pred             CEEEECCcccc
Confidence            99999999764

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=100.00  E-value=6.6e-33  Score=242.72  Aligned_cols=239  Identities=18%  Similarity=0.129  Sum_probs=185.9

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      ..+++|++|||||++|||++++++|+++|++|++++|+.+..+++.+++   +.++.++.+|+++.++++++++++.+.+
T Consensus         2 ~~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   81 (322)
T PRK07453          2 SQDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALG   81 (322)
T ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhC
Confidence            4467899999999999999999999999999999999988777766665   3468899999999999999999988777


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCC--ceEEEEecccccc----------
Q 024145           88 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQK--GCILFTASACTEI----------  155 (272)
Q Consensus        88 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--g~iv~iss~~~~~----------  155 (272)
                      +++|+||||||+.... ....+.+.++++..+++|+.+++.+++.++++|.+++.  +|||++||.....          
T Consensus        82 ~~iD~li~nAg~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~  160 (322)
T PRK07453         82 KPLDALVCNAAVYMPL-LKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIP  160 (322)
T ss_pred             CCccEEEECCcccCCC-CCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCC
Confidence            8899999999976431 22346788999999999999999999999999987653  6999999975421          


Q ss_pred             -------------------------cCCCCchhhhhHHHHHHHHHHHHHHhc-CCCcEEEEEeCCcc-cCCcccCCCCCh
Q 024145          156 -------------------------AGLGSPAYTISKYGILGLVKCLAAELG-QYGIRVNCVSPYGL-ATGMSMKGGVDP  208 (272)
Q Consensus       156 -------------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~i~Pg~v-~t~~~~~~~~~~  208 (272)
                                               ++.....|+.||.+.+.+++.+++++. .+||++++++||++ .|++.+......
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~  240 (322)
T PRK07453        161 APADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTPLFRNTPPLF  240 (322)
T ss_pred             CccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCcccccCCHHH
Confidence                                     012345799999999999999999995 46999999999999 588765321101


Q ss_pred             hHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccccEEE
Q 024145          209 ALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLV  252 (272)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~  252 (272)
                      ......+....  ...+.+++..+..+++++.+.....+|.+|.
T Consensus       241 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~  282 (322)
T PRK07453        241 QKLFPWFQKNI--TGGYVSQELAGERVAQVVADPEFAQSGVHWS  282 (322)
T ss_pred             HHHHHHHHHHH--hhceecHHHHhhHHHHhhcCcccCCCCceee
Confidence            11111111111  1234678888888888876554446888776

>PRK08251 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.8e-33  Score=233.27  Aligned_cols=211  Identities=23%  Similarity=0.282  Sum_probs=185.0

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh-----CCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL-----GQDVCYIHCDISNEDEVINLVDTAVSKFGK   89 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (272)
                      +|+++||||++|||++++++|+++|++|++++|+++..+++.+.+     +.++.++++|++++++++++++++.+++++
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG   81 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            689999999999999999999999999999999987766655443     347899999999999999999999999999


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCC-CchhhhhHH
Q 024145           90 LDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLG-SPAYTISKY  168 (272)
Q Consensus        90 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~-~~~Y~~sK~  168 (272)
                      +|++|||+|+...  ..+.+.+.+.+++.+++|+.+++.+++.+.+.+.+.+.++||++||..+..+.+. ...|+.||+
T Consensus        82 id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK~  159 (248)
T PRK08251         82 LDRVIVNAGIGKG--ARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLPGVKAAYAASKA  159 (248)
T ss_pred             CCEEEECCCcCCC--CCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCCCCcccHHHHHH
Confidence            9999999998765  5667778899999999999999999999999998877889999999988887775 688999999


Q ss_pred             HHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCC
Q 024145          169 GILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDE  242 (272)
Q Consensus       169 a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  242 (272)
                      +++.+++.++.++...||++++|+||+++|++.+...              .. ....++++.++.++..+...
T Consensus       160 a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~--------------~~-~~~~~~~~~a~~i~~~~~~~  218 (248)
T PRK08251        160 GVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKAK--------------ST-PFMVDTETGVKALVKAIEKE  218 (248)
T ss_pred             HHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhccc--------------cC-CccCCHHHHHHHHHHHHhcC
Confidence            9999999999999988999999999999999865211              01 24578999999999888654

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=100.00  E-value=2.2e-33  Score=223.41  Aligned_cols=222  Identities=23%  Similarity=0.288  Sum_probs=185.3

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHc-CCeE-EEeecCcchH-HHHHHH--hCCceEEEEecCCCHHHHHHHHHHHHHH--h
Q 024145           15 GKVAIITGGASGIGAMAVELFHEN-GAKV-VIADVQDKLG-EDLADK--LGQDVCYIHCDISNEDEVINLVDTAVSK--F   87 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~-G~~V-~~~~r~~~~~-~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~--~   87 (272)
                      -|.++||||++|||..++++|.+. |-++ +.++|+++.+ +++...  ...+++.+++|+++.++++++++++.+-  .
T Consensus         3 pksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~   82 (249)
T KOG1611|consen    3 PKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGS   82 (249)
T ss_pred             CccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhccc
Confidence            356999999999999999999976 6665 4566767763 333332  2578999999999999999999999987  4


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCC-----------CceEEEEeccccccc
Q 024145           88 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ-----------KGCILFTASACTEIA  156 (272)
Q Consensus        88 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----------~g~iv~iss~~~~~~  156 (272)
                      .++|+||+|||+..+ +....+.+.+.|.+.+++|..+++.+.|+++|++++..           ++.||++||.++..+
T Consensus        83 ~GlnlLinNaGi~~~-y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~~  161 (249)
T KOG1611|consen   83 DGLNLLINNAGIALS-YNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSIG  161 (249)
T ss_pred             CCceEEEeccceeee-cccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccccC
Confidence            579999999998765 35566777888999999999999999999999998643           247999999877653


Q ss_pred             C---CCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHH
Q 024145          157 G---LGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIAN  233 (272)
Q Consensus       157 ~---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  233 (272)
                      .   ..+.+|.+||+|+++|+|+++.|+.+.+|.|..+|||||.|+|...                   ....++|+.+.
T Consensus       162 ~~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg~-------------------~a~ltveeSts  222 (249)
T KOG1611|consen  162 GFRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGGK-------------------KAALTVEESTS  222 (249)
T ss_pred             CCCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCCC-------------------CcccchhhhHH
Confidence            2   3557999999999999999999999999999999999999999762                   34468888888


Q ss_pred             HHHHHhcCCCCCccccEEEecCc
Q 024145          234 AALYLASDESSYVSGQNLVVDGG  256 (272)
Q Consensus       234 ~~~~l~s~~~~~~~G~~i~~dgG  256 (272)
                      .++..........||.+++-|+-
T Consensus       223 ~l~~~i~kL~~~hnG~ffn~dlt  245 (249)
T KOG1611|consen  223 KLLASINKLKNEHNGGFFNRDGT  245 (249)
T ss_pred             HHHHHHHhcCcccCcceEccCCC
Confidence            88888877777779999988874

>PRK05693 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.6e-33  Score=236.33  Aligned_cols=220  Identities=20%  Similarity=0.271  Sum_probs=182.3

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEe
Q 024145           16 KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYN   95 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~   95 (272)
                      |++|||||++|||++++++|+++|++|++++|+.+..+++.+   ..+.++.+|+++.++++++++++.+.++++|++||
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~   78 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAA---AGFTAVQLDVNDGAALARLAEELEAEHGGLDVLIN   78 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence            689999999999999999999999999999998776554432   34678999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHHHHHHH
Q 024145           96 NAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVK  175 (272)
Q Consensus        96 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~~~  175 (272)
                      |+|....  +++.+.+.+++++.+++|+.+++.++++++|.|.+ ..|+||++||..+..+.+....|++||++++.+++
T Consensus        79 ~ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-~~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~~~~  155 (274)
T PRK05693         79 NAGYGAM--GPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRR-SRGLVVNIGSVSGVLVTPFAGAYCASKAAVHALSD  155 (274)
T ss_pred             CCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh-cCCEEEEECCccccCCCCCccHHHHHHHHHHHHHH
Confidence            9998654  67788899999999999999999999999999865 45899999999998888889999999999999999


Q ss_pred             HHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhH----------HHHHHhh-cCCCCCCCCChHhHHHHHHHHhcC
Q 024145          176 CLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPAL----------IESSMSQ-MGNLKGEFLKTDGIANAALYLASD  241 (272)
Q Consensus       176 ~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~----------~~~~~~~-~~~~~~~~~~~~dva~~~~~l~s~  241 (272)
                      +++.|+.++||+|++++||+++|++..........          ..+.... .........+|+++++.++..+..
T Consensus       156 ~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~~~  232 (274)
T PRK05693        156 ALRLELAPFGVQVMEVQPGAIASQFASNASREAEQLLAEQSPWWPLREHIQARARASQDNPTPAAEFARQLLAAVQQ  232 (274)
T ss_pred             HHHHHhhhhCeEEEEEecCccccccccccccchhhcCCCCCccHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHhC
Confidence            99999999999999999999999987642211110          0000000 000012346899999999987754

>PRK06181 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.8e-33  Score=235.02  Aligned_cols=222  Identities=26%  Similarity=0.365  Sum_probs=186.8

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   91 (272)
                      +|++|||||+||||+++++.|+++|++|++++|++...+++.+.+   +.++.++.+|++|+++++.+++++.++++++|
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   80 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID   80 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            478999999999999999999999999999999877666555443   45788999999999999999999999999999


Q ss_pred             EEEeCCCCCCCCCCCCCCC-CHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHH
Q 024145           92 IMYNNAGILDRSFGSILDT-PKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGI  170 (272)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~  170 (272)
                      ++|||+|....  ..+.+. +.+++++.+++|+.+++.+++.+.++|.++ .+++|++||..+..+.+++..|+.+|+++
T Consensus        81 ~vi~~ag~~~~--~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~  157 (263)
T PRK06181         81 ILVNNAGITMW--SRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKAS-RGQIVVVSSLAGLTGVPTRSGYAASKHAL  157 (263)
T ss_pred             EEEECCCcccc--cchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCEEEEEecccccCCCCCccHHHHHHHHH
Confidence            99999997655  556677 899999999999999999999999998653 58999999999888888899999999999


Q ss_pred             HHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCC
Q 024145          171 LGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDE  242 (272)
Q Consensus       171 ~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  242 (272)
                      +++++.++.++.+++++++++.||++.|++.........   ...........++++|+|++++++++++..
T Consensus       158 ~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~---~~~~~~~~~~~~~~~~~dva~~i~~~~~~~  226 (263)
T PRK06181        158 HGFFDSLRIELADDGVAVTVVCPGFVATDIRKRALDGDG---KPLGKSPMQESKIMSAEECAEAILPAIARR  226 (263)
T ss_pred             HHHHHHHHHHhhhcCceEEEEecCccccCcchhhccccc---cccccccccccCCCCHHHHHHHHHHHhhCC
Confidence            999999999999999999999999999998753211111   001111111146799999999999999753

>PRK07578 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.1e-33  Score=227.06  Aligned_cols=197  Identities=19%  Similarity=0.219  Sum_probs=170.1

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEeC
Q 024145           17 VAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNN   96 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~   96 (272)
                      ++|||||++|||++++++|+++ ++|++++|+..              .+++|+++++++++++++    .+++|++|||
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~--------------~~~~D~~~~~~~~~~~~~----~~~id~lv~~   62 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG--------------DVQVDITDPASIRALFEK----VGKVDAVVSA   62 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC--------------ceEecCCChHHHHHHHHh----cCCCCEEEEC
Confidence            6999999999999999999999 99999998753              378999999999888764    4789999999


Q ss_pred             CCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHHHHHHHH
Q 024145           97 AGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKC  176 (272)
Q Consensus        97 ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~~~~  176 (272)
                      +|....  .++.+.+.++|++.+++|+.+++.+++.+.|+|.+  .|+|+++||..+..+.+++..|+++|+++++|+++
T Consensus        63 ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~~~~  138 (199)
T PRK07578         63 AGKVHF--APLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLND--GGSFTLTSGILSDEPIPGGASAATVNGALEGFVKA  138 (199)
T ss_pred             CCCCCC--CchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCeEEEEcccccCCCCCCchHHHHHHHHHHHHHHH
Confidence            997654  66778899999999999999999999999999964  48999999999988889999999999999999999


Q ss_pred             HHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccccEEEe
Q 024145          177 LAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVV  253 (272)
Q Consensus       177 la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~  253 (272)
                      ++.|+ ++||++++|+||+++|++...        .+.    .+. ....+|+|+|+.++++++.   .++|+.|.+
T Consensus       139 la~e~-~~gi~v~~i~Pg~v~t~~~~~--------~~~----~~~-~~~~~~~~~a~~~~~~~~~---~~~g~~~~~  198 (199)
T PRK07578        139 AALEL-PRGIRINVVSPTVLTESLEKY--------GPF----FPG-FEPVPAARVALAYVRSVEG---AQTGEVYKV  198 (199)
T ss_pred             HHHHc-cCCeEEEEEcCCcccCchhhh--------hhc----CCC-CCCCCHHHHHHHHHHHhcc---ceeeEEecc
Confidence            99999 889999999999999987431        010    111 3457899999999988863   579998875

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=4.2e-33  Score=239.87  Aligned_cols=231  Identities=26%  Similarity=0.285  Sum_probs=189.5

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh-----CCceEEEEecCCCHHHHHHHHHHHH
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL-----GQDVCYIHCDISNEDEVINLVDTAV   84 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~   84 (272)
                      ..++.+++++|||+++|||+++|+.|+++|++|++++|+.+..++..+++     ...+.++++|+++.++|++++++++
T Consensus        30 ~~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~  109 (314)
T KOG1208|consen   30 GIDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFK  109 (314)
T ss_pred             cccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHH
Confidence            46688999999999999999999999999999999999998888777766     3478899999999999999999999


Q ss_pred             HHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccc---------
Q 024145           85 SKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEI---------  155 (272)
Q Consensus        85 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~---------  155 (272)
                      ++++++|++|||||+..++    ...+.|.++..|.+|+.|+|.+++.++|.|+++..+|||++||..+..         
T Consensus       110 ~~~~~ldvLInNAGV~~~~----~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~~~~~~~~~l~~  185 (314)
T KOG1208|consen  110 KKEGPLDVLINNAGVMAPP----FSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILGGGKIDLKDLSG  185 (314)
T ss_pred             hcCCCccEEEeCcccccCC----cccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccccCccchhhccc
Confidence            9999999999999998653    267788999999999999999999999999987779999999987611         


Q ss_pred             --c--CCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhH
Q 024145          156 --A--GLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGI  231 (272)
Q Consensus       156 --~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  231 (272)
                        .  +.....|+.||.++..+++.|++++.. ||++++++||.+.|+....   ..............  ..+.++++-
T Consensus       186 ~~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~-~V~~~~~hPG~v~t~~l~r---~~~~~~~l~~~l~~--~~~ks~~~g  259 (314)
T KOG1208|consen  186 EKAKLYSSDAAYALSKLANVLLANELAKRLKK-GVTTYSVHPGVVKTTGLSR---VNLLLRLLAKKLSW--PLTKSPEQG  259 (314)
T ss_pred             hhccCccchhHHHHhHHHHHHHHHHHHHHhhc-CceEEEECCCcccccceec---chHHHHHHHHHHHH--HhccCHHHH
Confidence              0  222235999999999999999999987 9999999999999994432   11111112222111  122479999


Q ss_pred             HHHHHHHhc-CCCCCccccE
Q 024145          232 ANAALYLAS-DESSYVSGQN  250 (272)
Q Consensus       232 a~~~~~l~s-~~~~~~~G~~  250 (272)
                      |+..++++. ++-..++|..
T Consensus       260 a~t~~~~a~~p~~~~~sg~y  279 (314)
T KOG1208|consen  260 AATTCYAALSPELEGVSGKY  279 (314)
T ss_pred             hhheehhccCccccCccccc
Confidence            999999874 4556677776

>PRK07102 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.2e-32  Score=228.99  Aligned_cols=208  Identities=19%  Similarity=0.141  Sum_probs=181.3

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh----CCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Q 024145           16 KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL----GQDVCYIHCDISNEDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   91 (272)
                      |+++||||++|||++++++|+++|++|++++|+++..+...+++    +.++.++++|++++++++++++++.+   .+|
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~---~~d   78 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPA---LPD   78 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhh---cCC
Confidence            68999999999999999999999999999999987766555443    45789999999999999999888754   469


Q ss_pred             EEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHHH
Q 024145           92 IMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGIL  171 (272)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~  171 (272)
                      ++|||+|....  ....+.+.+++.+.+++|+.+++.+++++.++|.+++.+++|++||..+..+.++...|+.+|++++
T Consensus        79 ~vv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  156 (243)
T PRK07102         79 IVLIAVGTLGD--QAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGRASNYVYGSAKAALT  156 (243)
T ss_pred             EEEECCcCCCC--cccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCCCCCcccHHHHHHHH
Confidence            99999997655  5677888999999999999999999999999998878899999999998888888899999999999


Q ss_pred             HHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCC
Q 024145          172 GLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDE  242 (272)
Q Consensus       172 ~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  242 (272)
                      +++++++.|+.++||++++|+||+++|++.....             .+. ....+|+++++.++..++..
T Consensus       157 ~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~~~-------------~~~-~~~~~~~~~a~~i~~~~~~~  213 (243)
T PRK07102        157 AFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAGLK-------------LPG-PLTAQPEEVAKDIFRAIEKG  213 (243)
T ss_pred             HHHHHHHHHhhccCcEEEEEecCcccChhhhccC-------------CCc-cccCCHHHHHHHHHHHHhCC
Confidence            9999999999999999999999999998754210             111 34578999999999988754

>PRK07023 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-32  Score=231.01  Aligned_cols=221  Identities=19%  Similarity=0.271  Sum_probs=179.2

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHH-HHHHh---CCcc
Q 024145           16 KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDT-AVSKF---GKLD   91 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-~~~~~---g~id   91 (272)
                      +++|||||+||||++++++|+++|++|++++|+....  ..+..+.++.++.+|+++.+++++++++ +.+.+   +++|
T Consensus         2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~--~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (243)
T PRK07023          2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS--LAAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRV   79 (243)
T ss_pred             ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh--hhhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCce
Confidence            3799999999999999999999999999999876532  2333455788999999999999998776 55544   4799


Q ss_pred             EEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHHH
Q 024145           92 IMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGIL  171 (272)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~  171 (272)
                      ++|||+|..... .++.+.+.+++++.+++|+.+++.+++.+.+.|.+++.++||++||..+..+.+++..|+++|++++
T Consensus        80 ~~v~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~  158 (243)
T PRK07023         80 LLINNAGTVEPI-GPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAYAGWSVYCATKAALD  158 (243)
T ss_pred             EEEEcCcccCCC-CccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCCCCchHHHHHHHHHH
Confidence            999999976542 4567788999999999999999999999999998877899999999999889999999999999999


Q ss_pred             HHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCC----hhHHHHHHhhcCCCCCCCCChHhHHH-HHHHHhcCC
Q 024145          172 GLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVD----PALIESSMSQMGNLKGEFLKTDGIAN-AALYLASDE  242 (272)
Q Consensus       172 ~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~dva~-~~~~l~s~~  242 (272)
                      ++++.++.+ .+.||+++.|+||+++|++.......    .... ..+....+. +++.+|+|+|. .+.+++++.
T Consensus       159 ~~~~~~~~~-~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~va~~~~~~l~~~~  231 (243)
T PRK07023        159 HHARAVALD-ANRALRIVSLAPGVVDTGMQATIRATDEERFPMR-ERFRELKAS-GALSTPEDAARRLIAYLLSDD  231 (243)
T ss_pred             HHHHHHHhc-CCCCcEEEEecCCccccHHHHHHHhcccccchHH-HHHHHhhhc-CCCCCHHHHHHHHHHHHhccc
Confidence            999999999 77899999999999999975421000    1111 112222333 78899999999 556666654

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=100.00  E-value=1.5e-32  Score=229.29  Aligned_cols=191  Identities=21%  Similarity=0.305  Sum_probs=176.8

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh-CCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL-GQDVCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      ..++.+|.|+|||+.+|+|+.+|++|.++|++|++.+-.++..+.+..+. ..+..++++|++++++++++...+++..+
T Consensus        24 ~~~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~  103 (322)
T KOG1610|consen   24 LDSLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLG  103 (322)
T ss_pred             ccccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhcc
Confidence            45678899999999999999999999999999999998888888888777 78899999999999999999999888653


Q ss_pred             --CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhh
Q 024145           89 --KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTIS  166 (272)
Q Consensus        89 --~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~s  166 (272)
                        ++-.||||||+.... ++.+-.+.++++.++++|+.|++.+++.++|++++ .+||||++||.+|..+.|...+|++|
T Consensus       104 ~~gLwglVNNAGi~~~~-g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~-arGRvVnvsS~~GR~~~p~~g~Y~~S  181 (322)
T KOG1610|consen  104 EDGLWGLVNNAGISGFL-GPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRR-ARGRVVNVSSVLGRVALPALGPYCVS  181 (322)
T ss_pred             cccceeEEecccccccc-CccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHh-ccCeEEEecccccCccCcccccchhh
Confidence              589999999987653 78889999999999999999999999999999976 68999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCccc
Q 024145          167 KYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSM  202 (272)
Q Consensus       167 K~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~  202 (272)
                      |+|++.|+.++.+|+.+.||+|.+|.||.++|++..
T Consensus       182 K~aVeaf~D~lR~EL~~fGV~VsiiePG~f~T~l~~  217 (322)
T KOG1610|consen  182 KFAVEAFSDSLRRELRPFGVKVSIIEPGFFKTNLAN  217 (322)
T ss_pred             HHHHHHHHHHHHHHHHhcCcEEEEeccCccccccCC
Confidence            999999999999999999999999999999999875

>PRK07326 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-31  Score=224.55  Aligned_cols=225  Identities=29%  Similarity=0.403  Sum_probs=192.2

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhC--CceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLG--QDVCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      +.+.+|+++||||+|+||++++++|+++|++|++++|+++..+++.+++.  .++.++.+|+++.++++++++++.+.++
T Consensus         2 ~~~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (237)
T PRK07326          2 MSLKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFG   81 (237)
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            34678999999999999999999999999999999998877776666654  5688999999999999999999999999


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHH
Q 024145           89 KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKY  168 (272)
Q Consensus        89 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~  168 (272)
                      ++|++||++|....  +++.+.+.+++++.+++|+.+++.+++++++.+ +++.++||++||..+..+......|+.+|+
T Consensus        82 ~~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~~~~iv~~ss~~~~~~~~~~~~y~~sk~  158 (237)
T PRK07326         82 GLDVLIANAGVGHF--APVEELTPEEWRLVIDTNLTGAFYTIKAAVPAL-KRGGGYIINISSLAGTNFFAGGAAYNASKF  158 (237)
T ss_pred             CCCEEEECCCCCCC--CchhhCCHHHHHHHHhhccHHHHHHHHHHHHHH-HHCCeEEEEECChhhccCCCCCchHHHHHH
Confidence            99999999997654  567788999999999999999999999999998 445689999999988888888889999999


Q ss_pred             HHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccc
Q 024145          169 GILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSG  248 (272)
Q Consensus       169 a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  248 (272)
                      +++++++.++.|+.+.|+++++++||++.|++....   +..  +       . ....+++|+++.++++++.....+.+
T Consensus       159 a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~---~~~--~-------~-~~~~~~~d~a~~~~~~l~~~~~~~~~  225 (237)
T PRK07326        159 GLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHT---PSE--K-------D-AWKIQPEDIAQLVLDLLKMPPRTLPS  225 (237)
T ss_pred             HHHHHHHHHHHHhcccCcEEEEEeeccccCcccccc---cch--h-------h-hccCCHHHHHHHHHHHHhCCcccccc
Confidence            999999999999998999999999999999876421   110  0       0 12368999999999999877665554


Q ss_pred             cEE
Q 024145          249 QNL  251 (272)
Q Consensus       249 ~~i  251 (272)
                      +..
T Consensus       226 ~~~  228 (237)
T PRK07326        226 KIE  228 (237)
T ss_pred             ceE
Confidence            443

>PRK07201 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.5e-32  Score=258.53  Aligned_cols=217  Identities=23%  Similarity=0.250  Sum_probs=187.9

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (272)
                      ..+++||++|||||++|||++++++|+++|++|++++|+++..+++.+++   +.++.++.+|++|.++++++++++.++
T Consensus       366 ~~~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  445 (657)
T PRK07201        366 RGPLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAE  445 (657)
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHh
Confidence            34678999999999999999999999999999999999988777666554   457899999999999999999999999


Q ss_pred             hCCccEEEeCCCCCCCCCCCCCCC--CHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhh
Q 024145           87 FGKLDIMYNNAGILDRSFGSILDT--PKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYT  164 (272)
Q Consensus        87 ~g~id~lv~~ag~~~~~~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~  164 (272)
                      ++++|++|||||....  ..+.+.  ..+++++++++|+.+++.+++.++|+|.+++.|+||++||..+..+.+....|+
T Consensus       446 ~g~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  523 (657)
T PRK07201        446 HGHVDYLVNNAGRSIR--RSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAPRFSAYV  523 (657)
T ss_pred             cCCCCEEEECCCCCCC--CChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCcchHH
Confidence            9999999999997543  223222  358899999999999999999999999888889999999999988888999999


Q ss_pred             hhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcC
Q 024145          165 ISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASD  241 (272)
Q Consensus       165 ~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  241 (272)
                      +||+++++|+++++.|+.++||++++|+||+++|++.....           .. .. ....+||++|+.++..+..
T Consensus       524 ~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~~-----------~~-~~-~~~~~~~~~a~~i~~~~~~  587 (657)
T PRK07201        524 ASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPTK-----------RY-NN-VPTISPEEAADMVVRAIVE  587 (657)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCccc-----------cc-cC-CCCCCHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999875211           00 11 3457899999999987654

>PRK06101 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-31  Score=223.26  Aligned_cols=204  Identities=18%  Similarity=0.170  Sum_probs=173.4

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEe
Q 024145           16 KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYN   95 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~   95 (272)
                      |+++||||++|||++++++|+++|++|++++|+++..+++.+. ..++.++.+|+++.++++++++++..   .+|.+||
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~---~~d~~i~   77 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQ-SANIFTLAFDVTDHPGTKAALSQLPF---IPELWIF   77 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh-cCCCeEEEeeCCCHHHHHHHHHhccc---CCCEEEE
Confidence            7899999999999999999999999999999988776665543 34688999999999999998887642   4799999


Q ss_pred             CCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHHHHHHH
Q 024145           96 NAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVK  175 (272)
Q Consensus        96 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~~~  175 (272)
                      |+|....  .+..+.+.+++++++++|+.+++.+++.+.|+|.+  .+++|++||..+..+.++...|++||++++++++
T Consensus        78 ~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~  153 (240)
T PRK06101         78 NAGDCEY--MDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSC--GHRVVIVGSIASELALPRAEAYGASKAAVAYFAR  153 (240)
T ss_pred             cCccccc--CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhc--CCeEEEEechhhccCCCCCchhhHHHHHHHHHHH
Confidence            9986533  33456788999999999999999999999999853  4789999999999999999999999999999999


Q ss_pred             HHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcC
Q 024145          176 CLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASD  241 (272)
Q Consensus       176 ~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  241 (272)
                      .++.|+.++||++++++||+++|++.....             ... ....+|++++..++..+..
T Consensus       154 ~l~~e~~~~gi~v~~v~pg~i~t~~~~~~~-------------~~~-~~~~~~~~~a~~i~~~i~~  205 (240)
T PRK06101        154 TLQLDLRPKGIEVVTVFPGFVATPLTDKNT-------------FAM-PMIITVEQASQEIRAQLAR  205 (240)
T ss_pred             HHHHHHHhcCceEEEEeCCcCCCCCcCCCC-------------CCC-CcccCHHHHHHHHHHHHhc
Confidence            999999999999999999999999865210             011 2346899999999887754

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=100.00  E-value=7e-32  Score=226.88  Aligned_cols=204  Identities=25%  Similarity=0.302  Sum_probs=165.8

Q ss_pred             HHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCC
Q 024145           31 AVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDT  110 (272)
Q Consensus        31 ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~  110 (272)
                      ++++|+++|++|++++|+++..+        ...++++|++|.++++++++++.   +++|+||||||....        
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~--------~~~~~~~Dl~~~~~v~~~~~~~~---~~iD~li~nAG~~~~--------   61 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMT--------LDGFIQADLGDPASIDAAVAALP---GRIDALFNIAGVPGT--------   61 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhh--------hhHhhcccCCCHHHHHHHHHHhc---CCCeEEEECCCCCCC--------
Confidence            47899999999999999876532        12468899999999999988764   689999999997421        


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccc---------------------------cCCCCchh
Q 024145          111 PKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEI---------------------------AGLGSPAY  163 (272)
Q Consensus       111 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~---------------------------~~~~~~~Y  163 (272)
                        +.+++.+++|+.+++.+++.++|+|.+  .|+||++||..+..                           +.++...|
T Consensus        62 --~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y  137 (241)
T PRK12428         62 --APVELVARVNFLGLRHLTEALLPRMAP--GGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGY  137 (241)
T ss_pred             --CCHHHhhhhchHHHHHHHHHHHHhccC--CcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHH
Confidence              247899999999999999999999864  48999999988752                           55677899


Q ss_pred             hhhHHHHHHHHHHHH-HHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCC
Q 024145          164 TISKYGILGLVKCLA-AELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDE  242 (272)
Q Consensus       164 ~~sK~a~~~~~~~la-~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  242 (272)
                      ++||+|+++++++++ .|++++||+||+|+||+++|++.......... ........++ +++.+|||+|+.++|++++.
T Consensus       138 ~~sK~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~-~~~~~pe~va~~~~~l~s~~  215 (241)
T PRK12428        138 QLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSMLGQ-ERVDSDAKRM-GRPATADEQAAVLVFLCSDA  215 (241)
T ss_pred             HHHHHHHHHHHHHHHHHhhhccCeEEEEeecCCccCcccccchhhhhh-Hhhhhccccc-CCCCCHHHHHHHHHHHcChh
Confidence            999999999999999 99999999999999999999987532111000 1111112233 77899999999999999988


Q ss_pred             CCCccccEEEecCceee
Q 024145          243 SSYVSGQNLVVDGGFSV  259 (272)
Q Consensus       243 ~~~~~G~~i~~dgG~~~  259 (272)
                      ..+++|+.+.+|||...
T Consensus       216 ~~~~~G~~i~vdgg~~~  232 (241)
T PRK12428        216 ARWINGVNLPVDGGLAA  232 (241)
T ss_pred             hcCccCcEEEecCchHH
Confidence            89999999999999754

>PRK08177 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9e-31  Score=217.82  Aligned_cols=217  Identities=21%  Similarity=0.279  Sum_probs=173.3

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEe
Q 024145           16 KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYN   95 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~   95 (272)
                      |+++||||++|||++++++|+++|++|++++|+++..+++.+ . .++.++.+|++|+++++++++.+.+  +++|++||
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-~-~~~~~~~~D~~d~~~~~~~~~~~~~--~~id~vi~   77 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQA-L-PGVHIEKLDMNDPASLDQLLQRLQG--QRFDLLFV   77 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHh-c-cccceEEcCCCCHHHHHHHHHHhhc--CCCCEEEE
Confidence            689999999999999999999999999999998876654432 2 3577889999999999999988754  47999999


Q ss_pred             CCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccccccc---CCCCchhhhhHHHHHH
Q 024145           96 NAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIA---GLGSPAYTISKYGILG  172 (272)
Q Consensus        96 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~---~~~~~~Y~~sK~a~~~  172 (272)
                      |+|.......++.+.+.+++++.+++|+.+++.+++.+++++.+ ..++++++||..+..+   ...++.|+++|++++.
T Consensus        78 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~iv~~ss~~g~~~~~~~~~~~~Y~~sK~a~~~  156 (225)
T PRK08177         78 NAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRP-GQGVLAFMSSQLGSVELPDGGEMPLYKASKAALNS  156 (225)
T ss_pred             cCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhh-cCCEEEEEccCccccccCCCCCccchHHHHHHHHH
Confidence            99986543345778889999999999999999999999999864 3588999999776543   2356789999999999


Q ss_pred             HHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccccEEE
Q 024145          173 LVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLV  252 (272)
Q Consensus       173 ~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~  252 (272)
                      |++.++.|+.++||++++|+||+++|++....                  .. .++++.+..++..+.......++.++.
T Consensus       157 ~~~~l~~e~~~~~i~v~~i~PG~i~t~~~~~~------------------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (225)
T PRK08177        157 MTRSFVAELGEPTLTVLSMHPGWVKTDMGGDN------------------AP-LDVETSVKGLVEQIEAASGKGGHRFID  217 (225)
T ss_pred             HHHHHHHHhhcCCeEEEEEcCCceecCCCCCC------------------CC-CCHHHHHHHHHHHHHhCCccCCCceeC
Confidence            99999999999999999999999999986421                  11 356666666666664443222333344


Q ss_pred             ecCc
Q 024145          253 VDGG  256 (272)
Q Consensus       253 ~dgG  256 (272)
                      .+|+
T Consensus       218 ~~~~  221 (225)
T PRK08177        218 YQGE  221 (225)
T ss_pred             cCCc
Confidence            4443

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=5e-32  Score=213.37  Aligned_cols=185  Identities=27%  Similarity=0.318  Sum_probs=167.9

Q ss_pred             CCcEEEEeCCC-ChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHH-HhCCcc
Q 024145           14 EGKVAIITGGA-SGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVS-KFGKLD   91 (272)
Q Consensus        14 ~~k~vlItGas-~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~g~id   91 (272)
                      +.|++||||++ ||||.++++.|+++|+.|+++.|+.+.-..+..+.  ++..+.+|+++++++.++..++.+ .+|++|
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~--gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld   83 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQF--GLKPYKLDVSKPEEVVTVSGEVRANPDGKLD   83 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhh--CCeeEEeccCChHHHHHHHHHHhhCCCCceE
Confidence            45789999875 79999999999999999999999988776665443  488999999999999999999998 789999


Q ss_pred             EEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHHH
Q 024145           92 IMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGIL  171 (272)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~  171 (272)
                      +|+||||..-.  .+..+.+.++++++|++|++|.+.+++++.. +.-+.+|.||++.|..+..+.|....|++||+|+.
T Consensus        84 ~L~NNAG~~C~--~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h-~likaKGtIVnvgSl~~~vpfpf~~iYsAsKAAih  160 (289)
T KOG1209|consen   84 LLYNNAGQSCT--FPALDATIAAVEQCFKVNVFGHIRMCRALSH-FLIKAKGTIVNVGSLAGVVPFPFGSIYSASKAAIH  160 (289)
T ss_pred             EEEcCCCCCcc--cccccCCHHHHHhhhccceeeeehHHHHHHH-HHHHccceEEEecceeEEeccchhhhhhHHHHHHH
Confidence            99999998654  6788999999999999999999999999884 44457899999999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCCcEEEEEeCCcccCCcccC
Q 024145          172 GLVKCLAAELGQYGIRVNCVSPYGLATGMSMK  203 (272)
Q Consensus       172 ~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~  203 (272)
                      ++++.|..|+++.||+|..+.||.+.|+....
T Consensus       161 ay~~tLrlEl~PFgv~Vin~itGGv~T~Ia~k  192 (289)
T KOG1209|consen  161 AYARTLRLELKPFGVRVINAITGGVATDIADK  192 (289)
T ss_pred             HhhhhcEEeeeccccEEEEecccceecccccC
Confidence            99999999999999999999999999987664

>PRK08264 short chain dehydrogenase; Validated

Probab=99.98  E-value=2.8e-30  Score=216.36  Aligned_cols=205  Identities=26%  Similarity=0.306  Sum_probs=176.1

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGK   89 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (272)
                      +++++|+++||||+|+||++++++|+++|+ +|++++|+.+..++    .+.++.++.+|+++.++++++++.    +++
T Consensus         2 ~~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~----~~~   73 (238)
T PRK08264          2 MDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD----LGPRVVPLQLDVTDPASVAAAAEA----ASD   73 (238)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh----cCCceEEEEecCCCHHHHHHHHHh----cCC
Confidence            457889999999999999999999999999 99999998765443    446789999999999998877664    467


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHH
Q 024145           90 LDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYG  169 (272)
Q Consensus        90 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a  169 (272)
                      +|++||++|.... ...+.+.+.+++.+.+++|+.+++.+++++.+.+.+.+.+++|++||..+..+.+++..|+.+|++
T Consensus        74 id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~sK~a  152 (238)
T PRK08264         74 VTILVNNAGIFRT-GSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNFPNLGTYSASKAA  152 (238)
T ss_pred             CCEEEECCCcCCC-CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCCCCchHhHHHHHH
Confidence            9999999998432 256788899999999999999999999999999987778999999999988888899999999999


Q ss_pred             HHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcC
Q 024145          170 ILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASD  241 (272)
Q Consensus       170 ~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  241 (272)
                      ++.+++.++.++.++|++++.++||.++|++.....                 +...+++++++.++..+..
T Consensus       153 ~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~~~~-----------------~~~~~~~~~a~~~~~~~~~  207 (238)
T PRK08264        153 AWSLTQALRAELAPQGTRVLGVHPGPIDTDMAAGLD-----------------APKASPADVARQILDALEA  207 (238)
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEeCCcccccccccCC-----------------cCCCCHHHHHHHHHHHHhC
Confidence            999999999999999999999999999998854210                 2246778888877766643

>PRK08017 oxidoreductase; Provisional

Probab=99.97  E-value=4.3e-30  Score=217.46  Aligned_cols=222  Identities=22%  Similarity=0.248  Sum_probs=183.1

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHh-CCccEEE
Q 024145           16 KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKF-GKLDIMY   94 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~id~lv   94 (272)
                      |+++||||+|+||+++++.|+++|++|++++|+.+..+.+.+   ..+..+.+|+++.++++.+++.+.... +++|.+|
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii   79 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNS---LGFTGILLDLDDPESVERAADEVIALTDNRLYGLF   79 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHh---CCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEE
Confidence            689999999999999999999999999999998876655432   247789999999999999999887754 6899999


Q ss_pred             eCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHHHHHH
Q 024145           95 NNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLV  174 (272)
Q Consensus        95 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~~  174 (272)
                      ||+|....  .+..+.+.+++++.+++|+.+++.+++.+++.+.+.+.++||++||..+..+.+....|+.+|++++.++
T Consensus        80 ~~ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~~~~~~~  157 (256)
T PRK08017         80 NNAGFGVY--GPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYAASKYALEAWS  157 (256)
T ss_pred             ECCCCCCc--cchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccCCCCccHHHHHHHHHHHHH
Confidence            99997654  5677889999999999999999999999999998877889999999988888889999999999999999


Q ss_pred             HHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCC
Q 024145          175 KCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESS  244 (272)
Q Consensus       175 ~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  244 (272)
                      ++++.++.++|++++.++||+++|++..........  ..........+.+.+|+|+++.+..+++....
T Consensus       158 ~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~  225 (256)
T PRK08017        158 DALRMELRHSGIKVSLIEPGPIRTRFTDNVNQTQSD--KPVENPGIAARFTLGPEAVVPKLRHALESPKP  225 (256)
T ss_pred             HHHHHHHhhcCCEEEEEeCCCcccchhhcccchhhc--cchhhhHHHhhcCCCHHHHHHHHHHHHhCCCC
Confidence            999999999999999999999999876532111000  00000000012458999999999999876543

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.97  E-value=1.5e-30  Score=206.33  Aligned_cols=160  Identities=36%  Similarity=0.586  Sum_probs=147.1

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecC--cchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024145           16 KVAIITGGASGIGAMAVELFHENGA-KVVIADVQ--DKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKFGK   89 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~-~V~~~~r~--~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (272)
                      |++|||||++|||++++++|+++|+ +|++++|+  .+..+++.+++   +.++.++++|++++++++++++++.+++++
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            7999999999999999999999965 67888988  55566665544   578999999999999999999999999999


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHH
Q 024145           90 LDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYG  169 (272)
Q Consensus        90 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a  169 (272)
                      +|++|||+|....  +++.+.+.++|++++++|+.+++.+.+++.|    ++.|+||++||..+..+.+++..|++||+|
T Consensus        81 ld~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~----~~~g~iv~~sS~~~~~~~~~~~~Y~askaa  154 (167)
T PF00106_consen   81 LDILINNAGIFSD--GSLDDLSEEELERVFRVNLFGPFLLAKALLP----QGGGKIVNISSIAGVRGSPGMSAYSASKAA  154 (167)
T ss_dssp             ESEEEEECSCTTS--BSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH----HTTEEEEEEEEGGGTSSSTTBHHHHHHHHH
T ss_pred             ccccccccccccc--cccccccchhhhhccccccceeeeeeehhee----ccccceEEecchhhccCCCCChhHHHHHHH
Confidence            9999999999874  7888999999999999999999999999999    468999999999999999999999999999


Q ss_pred             HHHHHHHHHHHh
Q 024145          170 ILGLVKCLAAEL  181 (272)
Q Consensus       170 ~~~~~~~la~e~  181 (272)
                      +++|++++++|+
T Consensus       155 l~~~~~~la~e~  166 (167)
T PF00106_consen  155 LRGLTQSLAAEL  166 (167)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhc
Confidence            999999999996

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.97  E-value=6.1e-30  Score=215.37  Aligned_cols=200  Identities=18%  Similarity=0.161  Sum_probs=153.8

Q ss_pred             ccCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145            8 APFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus         8 ~~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      .....+++|+++||||++|||++++++|+++|++|++++|+.....+.  .......++.+|+++.+++++       .+
T Consensus         7 ~~~~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~-------~~   77 (245)
T PRK12367          7 MAQSTWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSES--NDESPNEWIKWECGKEESLDK-------QL   77 (245)
T ss_pred             hhHHhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhh--hccCCCeEEEeeCCCHHHHHH-------hc
Confidence            445678999999999999999999999999999999999876322111  111223678899999988753       34


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCC---CCceEEEEecccccccCCCCchhh
Q 024145           88 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQ---QKGCILFTASACTEIAGLGSPAYT  164 (272)
Q Consensus        88 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~~g~iv~iss~~~~~~~~~~~~Y~  164 (272)
                      +++|++|||||...     ..+.+.+++++.+++|+.+++.+++.++|.|.++   +.+.++..+|..+..+ +....|+
T Consensus        78 ~~iDilVnnAG~~~-----~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~-~~~~~Y~  151 (245)
T PRK12367         78 ASLDVLILNHGINP-----GGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQP-ALSPSYE  151 (245)
T ss_pred             CCCCEEEECCccCC-----cCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCC-CCCchhH
Confidence            68999999999742     2346789999999999999999999999999753   2333445555555443 4567899


Q ss_pred             hhHHHHHHHH---HHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcC
Q 024145          165 ISKYGILGLV---KCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASD  241 (272)
Q Consensus       165 ~sK~a~~~~~---~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  241 (272)
                      +||+|++.+.   +.++.|+.+.|++++.++||+++|++..                    ...++||++|+.+++.++.
T Consensus       152 aSKaal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~~~--------------------~~~~~~~~vA~~i~~~~~~  211 (245)
T PRK12367        152 ISKRLIGQLVSLKKNLLDKNERKKLIIRKLILGPFRSELNP--------------------IGIMSADFVAKQILDQANL  211 (245)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcccccEEEEecCCCcccccCc--------------------cCCCCHHHHHHHHHHHHhc
Confidence            9999986543   4555566788999999999999988631                    1247899999999998865


Q ss_pred             C
Q 024145          242 E  242 (272)
Q Consensus       242 ~  242 (272)
                      .
T Consensus       212 ~  212 (245)
T PRK12367        212 G  212 (245)
T ss_pred             C
Confidence            3

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.1e-29  Score=215.17  Aligned_cols=218  Identities=23%  Similarity=0.308  Sum_probs=176.5

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   91 (272)
                      +|++|||||+||||++++++|+++|++|++++|+++..+++.+..   +.++.++.+|++|+++++++++      +++|
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------~~id   75 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAE------WDVD   75 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhc------CCCC
Confidence            579999999999999999999999999999999876655554432   4468899999999999877653      3799


Q ss_pred             EEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHHH
Q 024145           92 IMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGIL  171 (272)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~  171 (272)
                      +||||+|....  ++..+.+.+++++.+++|+.+++.+++.+++.+.+.+.++||++||..+..+.++...|++||++++
T Consensus        76 ~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~Y~~sK~a~~  153 (257)
T PRK09291         76 VLLNNAGIGEA--GAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITGPFTGAYCASKHALE  153 (257)
T ss_pred             EEEECCCcCCC--cCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCCCCcchhHHHHHHHH
Confidence            99999998765  6788899999999999999999999999999998777799999999988888888899999999999


Q ss_pred             HHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhH----HHHHH--hhcCCCCCCCCChHhHHHHHHHHhcC
Q 024145          172 GLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPAL----IESSM--SQMGNLKGEFLKTDGIANAALYLASD  241 (272)
Q Consensus       172 ~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~----~~~~~--~~~~~~~~~~~~~~dva~~~~~l~s~  241 (272)
                      .+++.++.++.+.||+++.|+||++.|++..........    .....  .....+ ....+++|+++.+..++..
T Consensus       154 ~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~  228 (257)
T PRK09291        154 AIAEAMHAELKPFGIQVATVNPGPYLTGFNDTMAETPKRWYDPARNFTDPEDLAFP-LEQFDPQEMIDAMVEVIPA  228 (257)
T ss_pred             HHHHHHHHHHHhcCcEEEEEecCcccccchhhhhhhhhhhcchhhHHHhhhhhhcc-ccCCCHHHHHHHHHHHhcC
Confidence            999999999999999999999999999875421110000    00000  111111 2346899999988887754

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.4e-29  Score=210.27  Aligned_cols=214  Identities=15%  Similarity=0.159  Sum_probs=177.2

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEe
Q 024145           16 KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYN   95 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~   95 (272)
                      |+++||||+++||++++++|+++|++|++++|+.+..+++..   ..+.++.+|+++.++++++++++..  +++|++||
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~~~~--~~~d~vi~   76 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQA---LGAEALALDVADPASVAGLAWKLDG--EALDAAVY   76 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHh---ccceEEEecCCCHHHHHHHHHHhcC--CCCCEEEE
Confidence            689999999999999999999999999999998776655433   2456899999999999998776643  47999999


Q ss_pred             CCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCC---chhhhhHHHHHH
Q 024145           96 NAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGS---PAYTISKYGILG  172 (272)
Q Consensus        96 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~---~~Y~~sK~a~~~  172 (272)
                      |+|..........+.+.+++++.+++|+.+++.+++++.++|.+ ..|++++++|..+..+....   ..|+++|++++.
T Consensus        77 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~g~iv~isS~~~~~~~~~~~~~~~Y~~sK~a~~~  155 (222)
T PRK06953         77 VAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEA-AGGVLAVLSSRMGSIGDATGTTGWLYRASKAALND  155 (222)
T ss_pred             CCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhc-cCCeEEEEcCcccccccccCCCccccHHhHHHHHH
Confidence            99986432245667789999999999999999999999998865 46889999998776553222   359999999999


Q ss_pred             HHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccccEEE
Q 024145          173 LVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLV  252 (272)
Q Consensus       173 ~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~  252 (272)
                      +++.++.++  .+++++.|+||+++|++.+.                   .....+++.+..+..+++......+|+++.
T Consensus       156 ~~~~~~~~~--~~i~v~~v~Pg~i~t~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (222)
T PRK06953        156 ALRAASLQA--RHATCIALHPGWVRTDMGGA-------------------QAALDPAQSVAGMRRVIAQATRRDNGRFFQ  214 (222)
T ss_pred             HHHHHhhhc--cCcEEEEECCCeeecCCCCC-------------------CCCCCHHHHHHHHHHHHHhcCcccCceEEe
Confidence            999999986  47999999999999998651                   123578999999998876666788999999


Q ss_pred             ecCc
Q 024145          253 VDGG  256 (272)
Q Consensus       253 ~dgG  256 (272)
                      .|++
T Consensus       215 ~~~~  218 (222)
T PRK06953        215 YDGV  218 (222)
T ss_pred             eCCc
Confidence            8876

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.97  E-value=4.6e-31  Score=220.32  Aligned_cols=190  Identities=28%  Similarity=0.312  Sum_probs=169.7

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh----CCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL----GQDVCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      -.|++++|||||.|||++.++.||++|.+|++++|++++++...+++    +.++.++.+|.++.+.+.+-+.+.... .
T Consensus        47 ~~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~-~  125 (312)
T KOG1014|consen   47 KLGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAG-L  125 (312)
T ss_pred             hcCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcC-C
Confidence            35599999999999999999999999999999999999998888777    457999999999887733222222111 2


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHH
Q 024145           89 KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKY  168 (272)
Q Consensus        89 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~  168 (272)
                      ++.+||||+|+....|..+.+.+.+.+++.+.+|+.++..+++.++|.|.++++|-|++++|..+..+.|.+..|++||+
T Consensus       126 ~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~p~~s~ysasK~  205 (312)
T KOG1014|consen  126 DVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIPTPLLSVYSASKA  205 (312)
T ss_pred             ceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccccChhHHHHHHHHH
Confidence            67899999999886568899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccC
Q 024145          169 GILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMK  203 (272)
Q Consensus       169 a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~  203 (272)
                      .++.|+++|..||..+||.|.++.|+.|-|+|...
T Consensus       206 ~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~~~  240 (312)
T KOG1014|consen  206 FVDFFSRCLQKEYESKGIFVQSVIPYLVATKMAKY  240 (312)
T ss_pred             HHHHHHHHHHHHHHhcCeEEEEeehhheecccccc
Confidence            99999999999999999999999999999999773

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=6.5e-30  Score=213.08  Aligned_cols=218  Identities=26%  Similarity=0.333  Sum_probs=192.2

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhC-----CceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           16 KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLG-----QDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      +.++|||+|+|||++++..+..+|++|.++.|+.+++.++.+.++     ..+.+..+|+.|-+++..+++++.+..+.+
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~  113 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPI  113 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCc
Confidence            689999999999999999999999999999999999988887763     136689999999999999999999999999


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCC-CceEEEEecccccccCCCCchhhhhHHH
Q 024145           91 DIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ-KGCILFTASACTEIAGLGSPAYTISKYG  169 (272)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~Y~~sK~a  169 (272)
                      |.+|+|||...+  +.+.+.+.++++..+++|+.++++.+++.++.|+++. .|+|+.+||..+..+..++.+|+++|+|
T Consensus       114 d~l~~cAG~~v~--g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~GysaYs~sK~a  191 (331)
T KOG1210|consen  114 DNLFCCAGVAVP--GLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYGYSAYSPSKFA  191 (331)
T ss_pred             ceEEEecCcccc--cccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCcccccccccHHHH
Confidence            999999998876  8899999999999999999999999999999998876 6899999999999999999999999999


Q ss_pred             HHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHh
Q 024145          170 ILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLA  239 (272)
Q Consensus       170 ~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  239 (272)
                      +.+++..++.|+.++||+|....|+.+.||..+......++.......    .....++|++|.+++.=+
T Consensus       192 lrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~En~tkP~~t~ii~g----~ss~~~~e~~a~~~~~~~  257 (331)
T KOG1210|consen  192 LRGLAEALRQELIKYGVHVTLYYPPDTLTPGFERENKTKPEETKIIEG----GSSVIKCEEMAKAIVKGM  257 (331)
T ss_pred             HHHHHHHHHHHHhhcceEEEEEcCCCCCCCccccccccCchheeeecC----CCCCcCHHHHHHHHHhHH
Confidence            999999999999999999999999999999877432222222222222    245588999999987644

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.5e-28  Score=202.00  Aligned_cols=220  Identities=20%  Similarity=0.282  Sum_probs=179.7

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEE
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMY   94 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv   94 (272)
                      .|++|||||+|+||+++++.|+++ ++|++++|+.+..+++.+.. ..+.++++|++|.++++++++++    +++|++|
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~----~~id~vi   76 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAEL-PGATPFPVDLTDPEAIAAAVEQL----GRLDVLV   76 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh-ccceEEecCCCCHHHHHHHHHhc----CCCCEEE
Confidence            479999999999999999999999 99999999877665555443 35788999999999988877643    4799999


Q ss_pred             eCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHHHHHH
Q 024145           95 NNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLV  174 (272)
Q Consensus        95 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~~  174 (272)
                      |++|....  .+..+.+.+++.+.+++|+.+++.+.+.+++.+.++ .+++|++||..+..+.+++..|+.+|++++.++
T Consensus        77 ~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~v~~ss~~~~~~~~~~~~y~~~K~a~~~~~  153 (227)
T PRK08219         77 HNAGVADL--GPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA-HGHVVFINSGAGLRANPGWGSYAASKFALRALA  153 (227)
T ss_pred             ECCCcCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCeEEEEcchHhcCcCCCCchHHHHHHHHHHHH
Confidence            99998654  556778899999999999999999999999988764 578999999998888888999999999999999


Q ss_pred             HHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccccEEEec
Q 024145          175 KCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVD  254 (272)
Q Consensus       175 ~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~d  254 (272)
                      +.++.++... ++++.+.||+++|++.....   .   ..  ......+++.+++|++++++++++...   +|.++.++
T Consensus       154 ~~~~~~~~~~-i~~~~i~pg~~~~~~~~~~~---~---~~--~~~~~~~~~~~~~dva~~~~~~l~~~~---~~~~~~~~  221 (227)
T PRK08219        154 DALREEEPGN-VRVTSVHPGRTDTDMQRGLV---A---QE--GGEYDPERYLRPETVAKAVRFAVDAPP---DAHITEVV  221 (227)
T ss_pred             HHHHHHhcCC-ceEEEEecCCccchHhhhhh---h---hh--ccccCCCCCCCHHHHHHHHHHHHcCCC---CCccceEE
Confidence            9999998766 99999999999887654211   0   00  011122678999999999999997543   45665554


Q ss_pred             C
Q 024145          255 G  255 (272)
Q Consensus       255 g  255 (272)
                      .
T Consensus       222 ~  222 (227)
T PRK08219        222 V  222 (227)
T ss_pred             E
Confidence            3

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.96  E-value=1.5e-29  Score=201.50  Aligned_cols=238  Identities=21%  Similarity=0.147  Sum_probs=189.2

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCeE--EEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGAKV--VIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~~V--~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      ..+|++|+||+|+|||..++..+..++-..  ++..|.....+.+....+........|++...-+.++++..+.+++..
T Consensus         4 ~~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~gkr   83 (253)
T KOG1204|consen    4 NMRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAELEGLKVAYGDDFVHVVGDITEEQLLGALREAPRKKGGKR   83 (253)
T ss_pred             ccceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhcccccccceEEEecCCcceechHHHHHHHHHHHHhhhhhcCCce
Confidence            356899999999999999999888887653  444444433333333334455566678888888888899898899999


Q ss_pred             cEEEeCCCCCCCCCC-CCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCC-CceEEEEecccccccCCCCchhhhhHH
Q 024145           91 DIMYNNAGILDRSFG-SILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ-KGCILFTASACTEIAGLGSPAYTISKY  168 (272)
Q Consensus        91 d~lv~~ag~~~~~~~-~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~Y~~sK~  168 (272)
                      |++|||||...+... ..+..+.++|++.|++|+++...+.+.++|.+++++ .+.+|++||.++..|+.+|..||.+|+
T Consensus        84 ~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~~~wa~yc~~Ka  163 (253)
T KOG1204|consen   84 DIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPFSSWAAYCSSKA  163 (253)
T ss_pred             eEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhccccHHHHhhhhHH
Confidence            999999998876422 224677899999999999999999999999998874 799999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCC---ChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCC
Q 024145          169 GILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGV---DPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSY  245 (272)
Q Consensus       169 a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  245 (272)
                      |.++|.+.+|.|=. .++++.++.||.+||+|......   ..+...+.++..... +++.+|...+..+.+|+.... +
T Consensus       164 Ar~m~f~~lA~EEp-~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~el~~~-~~ll~~~~~a~~l~~L~e~~~-f  240 (253)
T KOG1204|consen  164 ARNMYFMVLASEEP-FDVRVLNYAPGVVDTQMQVCIRETSRMTPADLKMFKELKES-GQLLDPQVTAKVLAKLLEKGD-F  240 (253)
T ss_pred             HHHHHHHHHhhcCc-cceeEEEccCCcccchhHHHHhhccCCCHHHHHHHHHHHhc-CCcCChhhHHHHHHHHHHhcC-c
Confidence            99999999999954 69999999999999999654321   122333333333333 788999999999999986654 8


Q ss_pred             ccccEEEe
Q 024145          246 VSGQNLVV  253 (272)
Q Consensus       246 ~~G~~i~~  253 (272)
                      ++||+...
T Consensus       241 ~sG~~vdy  248 (253)
T KOG1204|consen  241 VSGQHVDY  248 (253)
T ss_pred             cccccccc
Confidence            99998754

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.96  E-value=9.5e-27  Score=207.37  Aligned_cols=195  Identities=21%  Similarity=0.204  Sum_probs=151.4

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   91 (272)
                      .++||+++||||+||||++++++|+++|++|++++|+++..++..+.....+..+.+|++|++++++.+       +++|
T Consensus       175 sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l-------~~ID  247 (406)
T PRK07424        175 SLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELL-------EKVD  247 (406)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHh-------CCCC
Confidence            468999999999999999999999999999999998876554333322335778899999998876543       4799


Q ss_pred             EEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCC----ceEEEEecccccccCCCCchhhhhH
Q 024145           92 IMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQK----GCILFTASACTEIAGLGSPAYTISK  167 (272)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~----g~iv~iss~~~~~~~~~~~~Y~~sK  167 (272)
                      ++|||||....     .+.+.+++++.+++|+.+++.++++++|.|.+++.    +.+|++|+ ++ ...+..+.|++||
T Consensus       248 iLInnAGi~~~-----~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ss-a~-~~~~~~~~Y~ASK  320 (406)
T PRK07424        248 ILIINHGINVH-----GERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSE-AE-VNPAFSPLYELSK  320 (406)
T ss_pred             EEEECCCcCCC-----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcc-cc-ccCCCchHHHHHH
Confidence            99999997432     36788999999999999999999999999976532    34555554 33 3334567899999


Q ss_pred             HHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCC
Q 024145          168 YGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDES  243 (272)
Q Consensus       168 ~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  243 (272)
                      +|+..++. +.++.  .++.+..+.||+++|++..                    ...++||++|+.+++.++...
T Consensus       321 aAl~~l~~-l~~~~--~~~~I~~i~~gp~~t~~~~--------------------~~~~spe~vA~~il~~i~~~~  373 (406)
T PRK07424        321 RALGDLVT-LRRLD--APCVVRKLILGPFKSNLNP--------------------IGVMSADWVAKQILKLAKRDF  373 (406)
T ss_pred             HHHHHHHH-HHHhC--CCCceEEEEeCCCcCCCCc--------------------CCCCCHHHHHHHHHHHHHCCC
Confidence            99999974 44442  4677788899998887531                    124799999999999987654

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.94  E-value=6.9e-25  Score=228.12  Aligned_cols=180  Identities=17%  Similarity=0.125  Sum_probs=156.8

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHc-CCeEEEeecCcc------------------------------------------
Q 024145           14 EGKVAIITGGASGIGAMAVELFHEN-GAKVVIADVQDK------------------------------------------   50 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~-G~~V~~~~r~~~------------------------------------------   50 (272)
                      +|+++|||||++|||++++++|+++ |++|++++|+..                                          
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence            6899999999999999999999998 699999999820                                          


Q ss_pred             -----hHHHHH---HHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q 024145           51 -----LGEDLA---DKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVN  122 (272)
Q Consensus        51 -----~~~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n  122 (272)
                           ......   ++.+.++.++.||++|.++++++++++.++ +++|+||||||+...  +.+.+.+.++|+++|++|
T Consensus      2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~-g~IDgVVhnAGv~~~--~~i~~~t~e~f~~v~~~n 2152 (2582)
T TIGR02813      2076 VLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKT-LQITGIIHGAGVLAD--KHIQDKTLEEFNAVYGTK 2152 (2582)
T ss_pred             cchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHh-CCCcEEEECCccCCC--CCcccCCHHHHHHHHHHH
Confidence                 000111   223567899999999999999999999877 689999999998765  678899999999999999


Q ss_pred             hHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCccc
Q 024145          123 TIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSM  202 (272)
Q Consensus       123 ~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~  202 (272)
                      +.|.+.+++++.+.+.    ++||++||..+..+.+++..|+++|++++.+++.++.++.  +++|++|+||+++|+|..
T Consensus      2153 v~G~~~Ll~al~~~~~----~~IV~~SSvag~~G~~gqs~YaaAkaaL~~la~~la~~~~--~irV~sI~wG~wdtgm~~ 2226 (2582)
T TIGR02813      2153 VDGLLSLLAALNAENI----KLLALFSSAAGFYGNTGQSDYAMSNDILNKAALQLKALNP--SAKVMSFNWGPWDGGMVN 2226 (2582)
T ss_pred             HHHHHHHHHHHHHhCC----CeEEEEechhhcCCCCCcHHHHHHHHHHHHHHHHHHHHcC--CcEEEEEECCeecCCccc
Confidence            9999999998877553    3699999999999999999999999999999999999974  499999999999999864

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.93  E-value=3e-24  Score=188.06  Aligned_cols=218  Identities=14%  Similarity=0.102  Sum_probs=160.4

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcC--CeEEEeecCcchHHHHHHHhC-CceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENG--AKVVIADVQDKLGEDLADKLG-QDVCYIHCDISNEDEVINLVDTAVSKFGK   89 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G--~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (272)
                      ++||++|||||+|+||++++++|+++|  ++|++.+|+......+.+... .++.++.+|++|++++.++++       +
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~-------~   74 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALR-------G   74 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHh-------c
Confidence            468999999999999999999999986  789988887655444444432 468899999999999887665       5


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHH
Q 024145           90 LDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYG  169 (272)
Q Consensus        90 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a  169 (272)
                      +|++||+||....   +..+.   +..+.+++|+.+++++++++.+    .+.++||++||.....   ....|+.||++
T Consensus        75 iD~Vih~Ag~~~~---~~~~~---~~~~~~~~Nv~g~~~ll~aa~~----~~~~~iV~~SS~~~~~---p~~~Y~~sK~~  141 (324)
T TIGR03589        75 VDYVVHAAALKQV---PAAEY---NPFECIRTNINGAQNVIDAAID----NGVKRVVALSTDKAAN---PINLYGATKLA  141 (324)
T ss_pred             CCEEEECcccCCC---chhhc---CHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEeCCCCCC---CCCHHHHHHHH
Confidence            8999999996532   11222   2346899999999999999886    3446899999975433   34679999999


Q ss_pred             HHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhc--CC-----CCCCCCChHhHHHHHHHHhcCC
Q 024145          170 ILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQM--GN-----LKGEFLKTDGIANAALYLASDE  242 (272)
Q Consensus       170 ~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~--~~-----~~~~~~~~~dva~~~~~l~s~~  242 (272)
                      .+.+++.++.++.+.|+++++++||++.+|...   ..+..........  .+     ..+.|+.++|++++++.++...
T Consensus       142 ~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~~---~i~~~~~~~~~~~~~~~i~~~~~~r~~i~v~D~a~a~~~al~~~  218 (324)
T TIGR03589       142 SDKLFVAANNISGSKGTRFSVVRYGNVVGSRGS---VVPFFKSLKEEGVTELPITDPRMTRFWITLEQGVNFVLKSLERM  218 (324)
T ss_pred             HHHHHHHHHhhccccCcEEEEEeecceeCCCCC---cHHHHHHHHHhCCCCeeeCCCCceEeeEEHHHHHHHHHHHHhhC
Confidence            999999998888888999999999999987421   1122221111111  11     1135789999999999888542


Q ss_pred             CCCccccEEEecCce
Q 024145          243 SSYVSGQNLVVDGGF  257 (272)
Q Consensus       243 ~~~~~G~~i~~dgG~  257 (272)
                      .   .|+++ +..|.
T Consensus       219 ~---~~~~~-~~~~~  229 (324)
T TIGR03589       219 L---GGEIF-VPKIP  229 (324)
T ss_pred             C---CCCEE-ccCCC
Confidence            1   46666 44443

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.93  E-value=6.6e-24  Score=168.83  Aligned_cols=172  Identities=17%  Similarity=0.276  Sum_probs=146.0

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHHHH------HHHhCCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145           16 KVAIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGEDL------ADKLGQDVCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~~~------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      |+++||||++|||++++++|+++|+ .|++++|+++..+..      .+..+.++.++.+|++++++++++++++.+.++
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG   80 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            5799999999999999999999997 578888876543322      122355788999999999999999999988889


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHH
Q 024145           89 KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKY  168 (272)
Q Consensus        89 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~  168 (272)
                      ++|.+||++|....  ..+.+.+.+++++.+++|+.+++.+++.+.+    .+.++++++||..+..+.+.+..|+++|+
T Consensus        81 ~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~ii~~ss~~~~~~~~~~~~y~~sk~  154 (180)
T smart00822       81 PLRGVIHAAGVLDD--GLLANLTPERFAAVLAPKVDGAWNLHELTRD----LPLDFFVLFSSVAGVLGNPGQANYAAANA  154 (180)
T ss_pred             CeeEEEEccccCCc--cccccCCHHHHHHhhchHhHHHHHHHHHhcc----CCcceEEEEccHHHhcCCCCchhhHHHHH
Confidence            99999999998654  5677888999999999999999999998743    45688999999999888899999999999


Q ss_pred             HHHHHHHHHHHHhcCCCcEEEEEeCCccc
Q 024145          169 GILGLVKCLAAELGQYGIRVNCVSPYGLA  197 (272)
Q Consensus       169 a~~~~~~~la~e~~~~gi~v~~i~Pg~v~  197 (272)
                      +++.+++.++.    .|+++..+.||++.
T Consensus       155 ~~~~~~~~~~~----~~~~~~~~~~g~~~  179 (180)
T smart00822      155 FLDALAAHRRA----RGLPATSINWGAWA  179 (180)
T ss_pred             HHHHHHHHHHh----cCCceEEEeecccc
Confidence            99999977654    58889999999875

It uses NADPH to reduce the keto group to a hydroxy group.

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.92  E-value=1.2e-23  Score=192.20  Aligned_cols=222  Identities=14%  Similarity=0.160  Sum_probs=164.0

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh--------C----CceEEEEecCCCHHHHH
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL--------G----QDVCYIHCDISNEDEVI   77 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~--------~----~~~~~~~~D~~~~~~~~   77 (272)
                      .....||++|||||+|+||++++++|+++|++|++++|+.+..+.+.+++        +    .++.++.+|+++.++++
T Consensus        75 ~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~  154 (576)
T PLN03209         75 LDTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIG  154 (576)
T ss_pred             cccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHH
Confidence            34457899999999999999999999999999999999988776655432        1    25889999999999876


Q ss_pred             HHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccccc-cc
Q 024145           78 NLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTE-IA  156 (272)
Q Consensus        78 ~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~-~~  156 (272)
                      ++       ++++|+||||+|....        ...++...+++|+.+..++++++..    .+.++||++||.++. .+
T Consensus       155 ~a-------LggiDiVVn~AG~~~~--------~v~d~~~~~~VN~~Gt~nLl~Aa~~----agVgRIV~VSSiga~~~g  215 (576)
T PLN03209        155 PA-------LGNASVVICCIGASEK--------EVFDVTGPYRIDYLATKNLVDAATV----AKVNHFILVTSLGTNKVG  215 (576)
T ss_pred             HH-------hcCCCEEEEccccccc--------cccchhhHHHHHHHHHHHHHHHHHH----hCCCEEEEEccchhcccC
Confidence            53       3579999999986421        1124677889999999999998765    345789999998763 23


Q ss_pred             CCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHH
Q 024145          157 GLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAAL  236 (272)
Q Consensus       157 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  236 (272)
                      .+. ..|. +|+++..+.+.+..++...||++++|+||+++|++.....  ...+...... ... ++..+++|||+.++
T Consensus       216 ~p~-~~~~-sk~~~~~~KraaE~~L~~sGIrvTIVRPG~L~tp~d~~~~--t~~v~~~~~d-~~~-gr~isreDVA~vVv  289 (576)
T PLN03209        216 FPA-AILN-LFWGVLCWKRKAEEALIASGLPYTIVRPGGMERPTDAYKE--THNLTLSEED-TLF-GGQVSNLQVAELMA  289 (576)
T ss_pred             ccc-cchh-hHHHHHHHHHHHHHHHHHcCCCEEEEECCeecCCcccccc--ccceeecccc-ccC-CCccCHHHHHHHHH
Confidence            222 2344 7888888888888899889999999999999988654210  0111111111 222 67789999999999


Q ss_pred             HHhcCCCCCccccEEEecCce
Q 024145          237 YLASDESSYVSGQNLVVDGGF  257 (272)
Q Consensus       237 ~l~s~~~~~~~G~~i~~dgG~  257 (272)
                      ++++++... .++++.+-.+.
T Consensus       290 fLasd~~as-~~kvvevi~~~  309 (576)
T PLN03209        290 CMAKNRRLS-YCKVVEVIAET  309 (576)
T ss_pred             HHHcCchhc-cceEEEEEeCC
Confidence            999855321 46777666654

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.92  E-value=3.9e-23  Score=181.12  Aligned_cols=221  Identities=17%  Similarity=0.158  Sum_probs=162.0

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh-----CCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL-----GQDVCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      ++|++|||||+|+||++++++|+++|++|+++.|+....+......     ..++.++.+|+++.++++++++       
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   76 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAID-------   76 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHc-------
Confidence            5799999999999999999999999999998888876543332211     2468899999999999887775       


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCC----------
Q 024145           89 KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGL----------  158 (272)
Q Consensus        89 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~----------  158 (272)
                      ++|++||+||....      ..+.+.+.+.+++|+.+++++++++.+.+   +.++||++||..+..+..          
T Consensus        77 ~~d~vih~A~~~~~------~~~~~~~~~~~~~n~~g~~~ll~a~~~~~---~~~~iv~~SS~~~~~~~~~~~~~~~~~~  147 (325)
T PLN02989         77 GCETVFHTASPVAI------TVKTDPQVELINPAVNGTINVLRTCTKVS---SVKRVILTSSMAAVLAPETKLGPNDVVD  147 (325)
T ss_pred             CCCEEEEeCCCCCC------CCCCChHHHHHHHHHHHHHHHHHHHHHcC---CceEEEEecchhheecCCccCCCCCccC
Confidence            58999999996421      22345678899999999999999988754   246899999976543211          


Q ss_pred             ----C--------CchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCC-CChhHHHHHHhhcCCC---C
Q 024145          159 ----G--------SPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGG-VDPALIESSMSQMGNL---K  222 (272)
Q Consensus       159 ----~--------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~---~  222 (272)
                          .        ...|+.||.+.+.+++.++.+   +|+.+..++|+.+.+|...... .....+...+....+.   .
T Consensus       148 E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~~~~~~  224 (325)
T PLN02989        148 ETFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKD---NEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPFNTTH  224 (325)
T ss_pred             cCCCCchhHhcccccchHHHHHHHHHHHHHHHHH---cCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCCCCCcC
Confidence                0        136999999999999998877   4899999999999998765321 1112222222221111   1


Q ss_pred             CCCCChHhHHHHHHHHhcCCCCCccccEEEecCc
Q 024145          223 GEFLKTDGIANAALYLASDESSYVSGQNLVVDGG  256 (272)
Q Consensus       223 ~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG  256 (272)
                      +.+..++|+|++++.++....   .+..|+++|+
T Consensus       225 r~~i~v~Dva~a~~~~l~~~~---~~~~~ni~~~  255 (325)
T PLN02989        225 HRFVDVRDVALAHVKALETPS---ANGRYIIDGP  255 (325)
T ss_pred             cCeeEHHHHHHHHHHHhcCcc---cCceEEEecC
Confidence            467889999999998876532   1346788654

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.92  E-value=4.6e-23  Score=182.41  Aligned_cols=230  Identities=14%  Similarity=0.073  Sum_probs=166.4

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh--CCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL--GQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      ++||++|||||+|+||++++++|+++|++|++++|+........+.+  +.++.++.+|+++.++++++++..     ++
T Consensus         2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~   76 (349)
T TIGR02622         2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEF-----KP   76 (349)
T ss_pred             cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhc-----CC
Confidence            46899999999999999999999999999999998776544333222  346778999999999998887754     58


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccc------------cCC
Q 024145           91 DIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEI------------AGL  158 (272)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~------------~~~  158 (272)
                      |++||+|+....      ..+.+++...+++|+.+++.+++++.. .  ...+++|++||.....            +..
T Consensus        77 d~vih~A~~~~~------~~~~~~~~~~~~~N~~g~~~ll~a~~~-~--~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~  147 (349)
T TIGR02622        77 EIVFHLAAQPLV------RKSYADPLETFETNVMGTVNLLEAIRA-I--GSVKAVVNVTSDKCYRNDEWVWGYRETDPLG  147 (349)
T ss_pred             CEEEECCccccc------ccchhCHHHHHHHhHHHHHHHHHHHHh-c--CCCCEEEEEechhhhCCCCCCCCCccCCCCC
Confidence            999999995322      234566778899999999999998753 2  1246899999964321            123


Q ss_pred             CCchhhhhHHHHHHHHHHHHHHhcC----CCcEEEEEeCCcccCCcccCC-CCChhHHHHHHhhc------CCCCCCCCC
Q 024145          159 GSPAYTISKYGILGLVKCLAAELGQ----YGIRVNCVSPYGLATGMSMKG-GVDPALIESSMSQM------GNLKGEFLK  227 (272)
Q Consensus       159 ~~~~Y~~sK~a~~~~~~~la~e~~~----~gi~v~~i~Pg~v~t~~~~~~-~~~~~~~~~~~~~~------~~~~~~~~~  227 (272)
                      +...|+.||.+.+.+++.++.++.+    +|+++++++|+.+.+|..... ...+..........      ....+.|..
T Consensus       148 p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~rd~i~  227 (349)
T TIGR02622       148 GHDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVIIRNPDATRPWQH  227 (349)
T ss_pred             CCCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeEECCCCcccceee
Confidence            4568999999999999999988754    489999999999998853211 11122222222211      111256788


Q ss_pred             hHhHHHHHHHHhcCC--CCCccccEEEecCc
Q 024145          228 TDGIANAALYLASDE--SSYVSGQNLVVDGG  256 (272)
Q Consensus       228 ~~dva~~~~~l~s~~--~~~~~G~~i~~dgG  256 (272)
                      .+|++++++.++...  .....|+.|++..|
T Consensus       228 v~D~a~a~~~~~~~~~~~~~~~~~~yni~s~  258 (349)
T TIGR02622       228 VLEPLSGYLLLAEKLFTGQAEFAGAWNFGPR  258 (349)
T ss_pred             HHHHHHHHHHHHHHHhhcCccccceeeeCCC
Confidence            999999998776531  11123678999865

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.90  E-value=1.9e-21  Score=169.45  Aligned_cols=191  Identities=14%  Similarity=0.053  Sum_probs=146.9

Q ss_pred             CCcEEEEeCCCChHHHH--HHHHHHHcCCeEEEeecCcch---------------HHHHHHHhCCceEEEEecCCCHHHH
Q 024145           14 EGKVAIITGGASGIGAM--AVELFHENGAKVVIADVQDKL---------------GEDLADKLGQDVCYIHCDISNEDEV   76 (272)
Q Consensus        14 ~~k~vlItGas~giG~a--ia~~la~~G~~V~~~~r~~~~---------------~~~~~~~~~~~~~~~~~D~~~~~~~   76 (272)
                      .+|++||||+++|||.+  ++++| +.|++|+++++..+.               .++..++.+..+..+.||+++++++
T Consensus        40 ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~v  118 (398)
T PRK13656         40 GPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEIK  118 (398)
T ss_pred             CCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHH
Confidence            56999999999999999  89999 999998888753211               2223344455678899999999999


Q ss_pred             HHHHHHHHHHhCCccEEEeCCCCCCCCC-------------------CCC-------------CCCCHHHHHHHHHHHhH
Q 024145           77 INLVDTAVSKFGKLDIMYNNAGILDRSF-------------------GSI-------------LDTPKSDLERLINVNTI  124 (272)
Q Consensus        77 ~~~~~~~~~~~g~id~lv~~ag~~~~~~-------------------~~~-------------~~~~~~~~~~~~~~n~~  124 (272)
                      +++++++.+++|++|+||||+|...+..                   +.+             ...+.++++.++++.-.
T Consensus       119 ~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~Tv~vMgg  198 (398)
T PRK13656        119 QKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIADTVKVMGG  198 (398)
T ss_pred             HHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHHHHHhhcc
Confidence            9999999999999999999999874411                   000             12445666665554433


Q ss_pred             -HHHHHHHHHHHhhcCCCCceEEEEecccccccCCCC--chhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcc
Q 024145          125 -GGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGS--PAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMS  201 (272)
Q Consensus       125 -~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~--~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~  201 (272)
                       ....+++++...-.-..++++|..|........|.+  ..-+.+|++|++-++.++.++++.||++|++.+|++.|...
T Consensus       199 edw~~Wi~al~~a~lla~g~~~va~TY~G~~~t~p~Y~~g~mG~AKa~LE~~~r~La~~L~~~giran~i~~g~~~T~As  278 (398)
T PRK13656        199 EDWELWIDALDEAGVLAEGAKTVAYSYIGPELTHPIYWDGTIGKAKKDLDRTALALNEKLAAKGGDAYVSVLKAVVTQAS  278 (398)
T ss_pred             chHHHHHHHHHhcccccCCcEEEEEecCCcceeecccCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhh
Confidence             224455544433222467999999999988877766  47799999999999999999999999999999999999887


Q ss_pred             cCCC
Q 024145          202 MKGG  205 (272)
Q Consensus       202 ~~~~  205 (272)
                      ....
T Consensus       279 s~Ip  282 (398)
T PRK13656        279 SAIP  282 (398)
T ss_pred             hcCC
Confidence            7543

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.90  E-value=8.7e-23  Score=165.12  Aligned_cols=189  Identities=22%  Similarity=0.273  Sum_probs=163.3

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCC-----eEEEeecCcchHHHHHHHh----C---CceEEEEecCCCHHHHHHHHHH
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGA-----KVVIADVQDKLGEDLADKL----G---QDVCYIHCDISNEDEVINLVDT   82 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~-----~V~~~~r~~~~~~~~~~~~----~---~~~~~~~~D~~~~~~~~~~~~~   82 (272)
                      -|+++|||+++|||.+++++|++...     ++++++|+-++.++....+    +   .++.++.+|+++..|+.++..+
T Consensus         3 RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~d   82 (341)
T KOG1478|consen    3 RKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKD   82 (341)
T ss_pred             ceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHH
Confidence            48999999999999999999998754     4778899999998887766    2   3689999999999999999999


Q ss_pred             HHHHhCCccEEEeCCCCCCCCCC------------C-------------CCCCCHHHHHHHHHHHhHHHHHHHHHHHHhh
Q 024145           83 AVSKFGKLDIMYNNAGILDRSFG------------S-------------ILDTPKSDLERLINVNTIGGFLGAKHAARVM  137 (272)
Q Consensus        83 ~~~~~g~id~lv~~ag~~~~~~~------------~-------------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~  137 (272)
                      ++++|.++|.++.|||++..+.-            +             ....+.+++.++|+.||.|+|.+++.+.|++
T Consensus        83 i~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pll  162 (341)
T KOG1478|consen   83 IKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPLL  162 (341)
T ss_pred             HHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhHh
Confidence            99999999999999998654210            0             0125578899999999999999999999999


Q ss_pred             cCCCCceEEEEeccccccc---------CCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccC
Q 024145          138 VPQQKGCILFTASACTEIA---------GLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMK  203 (272)
Q Consensus       138 ~~~~~g~iv~iss~~~~~~---------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~  203 (272)
                      ..++...+|++||..+...         ..+..+|..||.+.+-+.-.+-+.+.+.|+..++++||...|.+...
T Consensus       163 ~~~~~~~lvwtSS~~a~kk~lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~tt~~~~~  237 (341)
T KOG1478|consen  163 CHSDNPQLVWTSSRMARKKNLSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFTTNSFSE  237 (341)
T ss_pred             hcCCCCeEEEEeecccccccCCHHHHhhhcCCCCcchhHHHHHHHHHHHhccccccchhhhcccCceeecchhhh
Confidence            8888889999999987643         35667999999999999999999999999999999999998877653

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.90  E-value=2.8e-21  Score=169.17  Aligned_cols=221  Identities=17%  Similarity=0.146  Sum_probs=157.9

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh-----CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL-----GQDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      -.||++|||||+|+||++++++|+++|++|+++.|+....+...+..     ..++.++.+|++++++++++++      
T Consensus         3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   76 (322)
T PLN02986          3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIE------   76 (322)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHh------
Confidence            36799999999999999999999999999998888776543332211     2468899999999999887776      


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccc-cCC--------
Q 024145           88 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEI-AGL--------  158 (272)
Q Consensus        88 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~-~~~--------  158 (272)
                       .+|++||+|+....  . .    .+...+.+++|+.++..+++++....   +-++||++||..... +.+        
T Consensus        77 -~~d~vih~A~~~~~--~-~----~~~~~~~~~~nv~gt~~ll~~~~~~~---~v~rvV~~SS~~~~~~~~~~~~~~~~~  145 (322)
T PLN02986         77 -GCDAVFHTASPVFF--T-V----KDPQTELIDPALKGTINVLNTCKETP---SVKRVILTSSTAAVLFRQPPIEANDVV  145 (322)
T ss_pred             -CCCEEEEeCCCcCC--C-C----CCchhhhhHHHHHHHHHHHHHHHhcC---CccEEEEecchhheecCCccCCCCCCc
Confidence             58999999986422  1 1    12235678999999999999876421   235899999976431 110        


Q ss_pred             -------------CCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCC-CChhHHHHHHhhcC---CC
Q 024145          159 -------------GSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGG-VDPALIESSMSQMG---NL  221 (272)
Q Consensus       159 -------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~-~~~~~~~~~~~~~~---~~  221 (272)
                                   ....|+.||.+.+.+++.+.++   +|+.+++++|+.+.+|...... ..............   ..
T Consensus       146 ~E~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~---~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~  222 (322)
T PLN02986        146 DETFFSDPSLCRETKNWYPLSKILAENAAWEFAKD---NGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNLFNNR  222 (322)
T ss_pred             CcccCCChHHhhccccchHHHHHHHHHHHHHHHHH---hCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCCCCCc
Confidence                         1356999999999999998776   4899999999999999754211 11222222222211   11


Q ss_pred             CCCCCChHhHHHHHHHHhcCCCCCccccEEEecCc
Q 024145          222 KGEFLKTDGIANAALYLASDESSYVSGQNLVVDGG  256 (272)
Q Consensus       222 ~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG  256 (272)
                      ...+..++|+|++++.++.....  .| .|+++|+
T Consensus       223 ~~~~v~v~Dva~a~~~al~~~~~--~~-~yni~~~  254 (322)
T PLN02986        223 FYRFVDVRDVALAHIKALETPSA--NG-RYIIDGP  254 (322)
T ss_pred             CcceeEHHHHHHHHHHHhcCccc--CC-cEEEecC
Confidence            24688999999999988865432  34 6788544

>PLN02583 cinnamoyl-CoA reductase

Probab=99.89  E-value=3.5e-21  Score=166.73  Aligned_cols=216  Identities=13%  Similarity=0.042  Sum_probs=151.7

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcch--HHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKL--GEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~--~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      .+|++|||||+|+||++++++|+++|++|+++.|+...  ..+....+   +.++.++.+|++|.+++.+++.       
T Consensus         5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~-------   77 (297)
T PLN02583          5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALK-------   77 (297)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHc-------
Confidence            56899999999999999999999999999999885432  22222332   3468889999999998866554       


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccC---C-------
Q 024145           89 KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAG---L-------  158 (272)
Q Consensus        89 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~---~-------  158 (272)
                      ..|.++|.++....       .. .++++.+++|+.+++++++++.+.+   ..++||++||..+....   .       
T Consensus        78 ~~d~v~~~~~~~~~-------~~-~~~~~~~~~nv~gt~~ll~aa~~~~---~v~riV~~SS~~a~~~~~~~~~~~~~~~  146 (297)
T PLN02583         78 GCSGLFCCFDPPSD-------YP-SYDEKMVDVEVRAAHNVLEACAQTD---TIEKVVFTSSLTAVIWRDDNISTQKDVD  146 (297)
T ss_pred             CCCEEEEeCccCCc-------cc-ccHHHHHHHHHHHHHHHHHHHHhcC---CccEEEEecchHheecccccCCCCCCCC
Confidence            68999987653211       11 2467899999999999999998754   23689999998654211   0       


Q ss_pred             --CC----------chhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCC
Q 024145          159 --GS----------PAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFL  226 (272)
Q Consensus       159 --~~----------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (272)
                        .+          ..|+.||...+.+++.++++   +|+++++++|+++.+|.....   .............-...+.
T Consensus       147 E~~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~---~gi~~v~lrp~~v~Gp~~~~~---~~~~~~~~~~~~~~~~~~v  220 (297)
T PLN02583        147 ERSWSDQNFCRKFKLWHALAKTLSEKTAWALAMD---RGVNMVSINAGLLMGPSLTQH---NPYLKGAAQMYENGVLVTV  220 (297)
T ss_pred             cccCCCHHHHhhcccHHHHHHHHHHHHHHHHHHH---hCCcEEEEcCCcccCCCCCCc---hhhhcCCcccCcccCcceE
Confidence              01          16999999999999988776   489999999999999875421   1111110000011112478


Q ss_pred             ChHhHHHHHHHHhcCCCCCccccEEEecCc
Q 024145          227 KTDGIANAALYLASDESSYVSGQNLVVDGG  256 (272)
Q Consensus       227 ~~~dva~~~~~l~s~~~~~~~G~~i~~dgG  256 (272)
                      +++|+|++++..+....  ..| .+.+.++
T Consensus       221 ~V~Dva~a~~~al~~~~--~~~-r~~~~~~  247 (297)
T PLN02583        221 DVNFLVDAHIRAFEDVS--SYG-RYLCFNH  247 (297)
T ss_pred             EHHHHHHHHHHHhcCcc--cCC-cEEEecC
Confidence            89999999998886433  234 4555555

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.89  E-value=1.3e-21  Score=172.51  Aligned_cols=235  Identities=14%  Similarity=0.012  Sum_probs=156.2

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcch-----HHHHHHH---hCCceEEEEecCCCHHHHHHHHHHH
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKL-----GEDLADK---LGQDVCYIHCDISNEDEVINLVDTA   83 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~-----~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~   83 (272)
                      +.++|++|||||+|+||++++++|+++|++|++++|++..     .+.+.+.   .+.++.++.+|++|.++++++++..
T Consensus         3 ~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   82 (340)
T PLN02653          3 DPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDI   82 (340)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHc
Confidence            5678999999999999999999999999999999886542     2222111   1245889999999999998888764


Q ss_pred             HHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCC-ceEEEEeccccccc------
Q 024145           84 VSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQK-GCILFTASACTEIA------  156 (272)
Q Consensus        84 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-g~iv~iss~~~~~~------  156 (272)
                           .+|+|||+|+....      ....+.....+++|+.++..+++++.+.+.+++. -++|++||......      
T Consensus        83 -----~~d~Vih~A~~~~~------~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~  151 (340)
T PLN02653         83 -----KPDEVYNLAAQSHV------AVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPPPQS  151 (340)
T ss_pred             -----CCCEEEECCcccch------hhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCCCCC
Confidence                 58999999997543      1223445677899999999999999887754311 26888887532211      


Q ss_pred             ----CCCCchhhhhHHHHHHHHHHHHHHhcC---CCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhc--------CCC
Q 024145          157 ----GLGSPAYTISKYGILGLVKCLAAELGQ---YGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQM--------GNL  221 (272)
Q Consensus       157 ----~~~~~~Y~~sK~a~~~~~~~la~e~~~---~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~--------~~~  221 (272)
                          ......|+.||.+.+.+++.++.+++-   .++.++.+.|+...+.+..   .....+.......        ...
T Consensus       152 E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~g~~  228 (340)
T PLN02653        152 ETTPFHPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTR---KITRAVGRIKVGLQKKLFLGNLDA  228 (340)
T ss_pred             CCCCCCCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchh---HHHHHHHHHHcCCCCceEeCCCcc
Confidence                113557999999999999999888632   1233334444422211000   0001111111111        111


Q ss_pred             CCCCCChHhHHHHHHHHhcCCCCCccccEEEecCceeeccCcc
Q 024145          222 KGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVVNPTV  264 (272)
Q Consensus       222 ~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~~  264 (272)
                      .+.|...+|++++++.++...    .+..+++.+|..+....+
T Consensus       229 ~rd~i~v~D~a~a~~~~~~~~----~~~~yni~~g~~~s~~e~  267 (340)
T PLN02653        229 SRDWGFAGDYVEAMWLMLQQE----KPDDYVVATEESHTVEEF  267 (340)
T ss_pred             eecceeHHHHHHHHHHHHhcC----CCCcEEecCCCceeHHHH
Confidence            247789999999999888643    246788988876543333

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.89  E-value=5.3e-21  Score=173.83  Aligned_cols=231  Identities=12%  Similarity=0.013  Sum_probs=160.9

Q ss_pred             cCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcc---h--------------HHHH---HHHhCCceEEEEe
Q 024145            9 PFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDK---L--------------GEDL---ADKLGQDVCYIHC   68 (272)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~---~--------------~~~~---~~~~~~~~~~~~~   68 (272)
                      ....+++|++|||||+|+||++++++|+++|++|++++|...   .              .+.+   .+..+.++.++.+
T Consensus        41 ~~~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~  120 (442)
T PLN02572         41 SSSSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVG  120 (442)
T ss_pred             CCccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEEC
Confidence            356678999999999999999999999999999999764211   0              0111   1111346889999


Q ss_pred             cCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEE
Q 024145           69 DISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFT  148 (272)
Q Consensus        69 D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~i  148 (272)
                      |++|.++++++++..     ++|+|||+|+...   ......+.+++...+++|+.+++++++++...-.   ..++|++
T Consensus       121 Dl~d~~~v~~~l~~~-----~~D~ViHlAa~~~---~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv---~~~~V~~  189 (442)
T PLN02572        121 DICDFEFLSEAFKSF-----EPDAVVHFGEQRS---APYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAP---DCHLVKL  189 (442)
T ss_pred             CCCCHHHHHHHHHhC-----CCCEEEECCCccc---ChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCC---CccEEEE
Confidence            999999998888754     6999999997643   2233444566778889999999999998876422   2479999


Q ss_pred             eccccccc------------------------CCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCC
Q 024145          149 ASACTEIA------------------------GLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKG  204 (272)
Q Consensus       149 ss~~~~~~------------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~  204 (272)
                      ||...+..                        ......|+.||.+.+.+++.++..   +|+.+..++|+.+.+|.....
T Consensus       190 SS~~vYG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~---~gl~~v~lR~~~vyGp~~~~~  266 (442)
T PLN02572        190 GTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVYGVRTDET  266 (442)
T ss_pred             ecceecCCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHh---cCCCEEEEecccccCCCCccc
Confidence            98753211                        112347999999999999988776   589999999999999874321


Q ss_pred             CC-----------------ChhHHHHHHhhcC-------CCCCCCCChHhHHHHHHHHhcCCCCCccc--cEEEecC
Q 024145          205 GV-----------------DPALIESSMSQMG-------NLKGEFLKTDGIANAALYLASDESSYVSG--QNLVVDG  255 (272)
Q Consensus       205 ~~-----------------~~~~~~~~~~~~~-------~~~~~~~~~~dva~~~~~l~s~~~~~~~G--~~i~~dg  255 (272)
                      ..                 .+..+........       ...+.|..++|++++++.++....  ..|  .++++++
T Consensus       267 ~~~~~li~~~~~~~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~--~~g~~~i~Nigs  341 (442)
T PLN02572        267 MMDEELINRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPA--KPGEFRVFNQFT  341 (442)
T ss_pred             ccccccccccCcccchhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChh--hcCceeEEEeCC
Confidence            00                 0011122211111       112478899999999998886431  234  4677754

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.89  E-value=4.5e-21  Score=163.34  Aligned_cols=223  Identities=17%  Similarity=0.109  Sum_probs=170.2

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHH--HHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGED--LADKL---GQDVCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~--~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      .+++|+||||||.||+++++.|+++||+|..+.|+++..+.  ...++   +.+...+..|++|+++.+++++       
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~-------   77 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAID-------   77 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHh-------
Confidence            67899999999999999999999999999999999987544  23333   3469999999999999999888       


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccC-CC--------
Q 024145           89 KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAG-LG--------  159 (272)
Q Consensus        89 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~-~~--------  159 (272)
                      +.|+|||.|.....     ...  +.-.+.++..+.|+.++++++...-   .=.|||++||.++.... +.        
T Consensus        78 gcdgVfH~Asp~~~-----~~~--~~e~~li~pav~Gt~nVL~ac~~~~---sVkrvV~TSS~aAv~~~~~~~~~~~vvd  147 (327)
T KOG1502|consen   78 GCDGVFHTASPVDF-----DLE--DPEKELIDPAVKGTKNVLEACKKTK---SVKRVVYTSSTAAVRYNGPNIGENSVVD  147 (327)
T ss_pred             CCCEEEEeCccCCC-----CCC--CcHHhhhhHHHHHHHHHHHHHhccC---CcceEEEeccHHHhccCCcCCCCCcccc
Confidence            79999999975443     111  1233789999999999999987633   23579999999876643 11        


Q ss_pred             ---C----------chhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCC-hhHHHHHHhh----cCCC
Q 024145          160 ---S----------PAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVD-PALIESSMSQ----MGNL  221 (272)
Q Consensus       160 ---~----------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~-~~~~~~~~~~----~~~~  221 (272)
                         |          ..|+.||.-.|..++.++.|   +|+....|+|+.|-+|........ .....+.+..    ..+.
T Consensus       148 E~~wsd~~~~~~~~~~Y~~sK~lAEkaAw~fa~e---~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~n~  224 (327)
T KOG1502|consen  148 EESWSDLDFCRCKKLWYALSKTLAEKAAWEFAKE---NGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYPNF  224 (327)
T ss_pred             cccCCcHHHHHhhHHHHHHHHHHHHHHHHHHHHh---CCccEEEecCCceECCCcccccchhHHHHHHHHhcccccCCCC
Confidence               1          26999999999999999998   589999999999999988752222 1223333332    1222


Q ss_pred             CCCCCChHhHHHHHHHHhcCCCCCccccEEEecCcee
Q 024145          222 KGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFS  258 (272)
Q Consensus       222 ~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~  258 (272)
                      ...+.+.+|+|.+.+++......  .|++|-++...+
T Consensus       225 ~~~~VdVrDVA~AHv~a~E~~~a--~GRyic~~~~~~  259 (327)
T KOG1502|consen  225 WLAFVDVRDVALAHVLALEKPSA--KGRYICVGEVVS  259 (327)
T ss_pred             ceeeEeHHHHHHHHHHHHcCccc--CceEEEecCccc
Confidence            23468899999999999977654  588777776665

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.88  E-value=3.8e-21  Score=170.47  Aligned_cols=228  Identities=17%  Similarity=0.138  Sum_probs=160.3

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCeEE-EeecCcch--HHHHHHH-hCCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Q 024145           16 KVAIITGGASGIGAMAVELFHENGAKVV-IADVQDKL--GEDLADK-LGQDVCYIHCDISNEDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~~V~-~~~r~~~~--~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   91 (272)
                      |++|||||+|+||+++++.|.++|++++ +++|....  ...+... .+.++.++.+|++|.++++++++..     ++|
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~D   76 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEH-----QPD   76 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhc-----CCC
Confidence            5899999999999999999999998754 45554321  1111111 1235788999999999988877742     699


Q ss_pred             EEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhc---C--CCCceEEEEecccccc-----------
Q 024145           92 IMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMV---P--QQKGCILFTASACTEI-----------  155 (272)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~--~~~g~iv~iss~~~~~-----------  155 (272)
                      +|||+||....      ..+.++++..+++|+.+++.+++++.+.+.   +  .+..++|++||.....           
T Consensus        77 ~Vih~A~~~~~------~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E  150 (355)
T PRK10217         77 CVMHLAAESHV------DRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTE  150 (355)
T ss_pred             EEEECCcccCc------chhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCC
Confidence            99999986432      233466789999999999999999987532   1  1235899999864211           


Q ss_pred             --cCCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhc-CCC------CCCCC
Q 024145          156 --AGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQM-GNL------KGEFL  226 (272)
Q Consensus       156 --~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~-~~~------~~~~~  226 (272)
                        +..+...|+.||.+.+.+++.++++   .++.+..+.|+.+..|........+.......... .+.      ...++
T Consensus       151 ~~~~~p~s~Y~~sK~~~e~~~~~~~~~---~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i  227 (355)
T PRK10217        151 TTPYAPSSPYSASKASSDHLVRAWLRT---YGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWL  227 (355)
T ss_pred             CCCCCCCChhHHHHHHHHHHHHHHHHH---hCCCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCCceEeCCCCeeeCcC
Confidence              1234568999999999999999887   47889999999998886431111112222222211 111      24688


Q ss_pred             ChHhHHHHHHHHhcCCCCCccccEEEecCceeec
Q 024145          227 KTDGIANAALYLASDESSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       227 ~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~  260 (272)
                      .++|++.++..++...   ..|+.|++.+|..++
T Consensus       228 ~v~D~a~a~~~~~~~~---~~~~~yni~~~~~~s  258 (355)
T PRK10217        228 YVEDHARALYCVATTG---KVGETYNIGGHNERK  258 (355)
T ss_pred             cHHHHHHHHHHHHhcC---CCCCeEEeCCCCccc
Confidence            9999999998887543   257899999887653

>PLN02214 cinnamoyl-CoA reductase

Probab=99.88  E-value=3.1e-20  Score=163.87  Aligned_cols=219  Identities=15%  Similarity=0.123  Sum_probs=156.0

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHH-HHHHh---CCceEEEEecCCCHHHHHHHHHHHHH
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGED-LADKL---GQDVCYIHCDISNEDEVINLVDTAVS   85 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~-~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (272)
                      +..+++|++|||||+|+||++++++|+++|++|++++|+.+.... ....+   ..++.++.+|+++.++++++++    
T Consensus         5 ~~~~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----   80 (342)
T PLN02214          5 VASPAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAID----   80 (342)
T ss_pred             cccCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHh----
Confidence            334678999999999999999999999999999999987654221 11222   2358889999999999887765    


Q ss_pred             HhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCC-------
Q 024145           86 KFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGL-------  158 (272)
Q Consensus        86 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~-------  158 (272)
                         ++|+|||+|+...           +++.+.+++|+.++..+++++...    +-++||++||..+.++.+       
T Consensus        81 ---~~d~Vih~A~~~~-----------~~~~~~~~~nv~gt~~ll~aa~~~----~v~r~V~~SS~~avyg~~~~~~~~~  142 (342)
T PLN02214         81 ---GCDGVFHTASPVT-----------DDPEQMVEPAVNGAKFVINAAAEA----KVKRVVITSSIGAVYMDPNRDPEAV  142 (342)
T ss_pred             ---cCCEEEEecCCCC-----------CCHHHHHHHHHHHHHHHHHHHHhc----CCCEEEEeccceeeeccCCCCCCcc
Confidence               5899999998531           135678999999999999988753    335899999975433210       


Q ss_pred             --------------CCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCC-ChhHHHHHHhhc----C
Q 024145          159 --------------GSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGV-DPALIESSMSQM----G  219 (272)
Q Consensus       159 --------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~-~~~~~~~~~~~~----~  219 (272)
                                    ....|+.||.+.+.+++.++.+   +|+.+..++|+.+..|....... ........+...    .
T Consensus       143 ~~E~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~---~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~  219 (342)
T PLN02214        143 VDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKE---KGVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYA  219 (342)
T ss_pred             cCcccCCChhhccccccHHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcccCC
Confidence                          1236999999999999998877   48999999999999986542111 011111111111    1


Q ss_pred             CCCCCCCChHhHHHHHHHHhcCCCCCccccEEEecCc
Q 024145          220 NLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGG  256 (272)
Q Consensus       220 ~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG  256 (272)
                      ...+.+..++|+|++++.++....   .|..+++.++
T Consensus       220 ~~~~~~i~V~Dva~a~~~al~~~~---~~g~yn~~~~  253 (342)
T PLN02214        220 NLTQAYVDVRDVALAHVLVYEAPS---ASGRYLLAES  253 (342)
T ss_pred             CCCcCeeEHHHHHHHHHHHHhCcc---cCCcEEEecC
Confidence            112467899999999998886532   2335566543

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.88  E-value=2.4e-21  Score=155.79  Aligned_cols=171  Identities=19%  Similarity=0.334  Sum_probs=131.8

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcc---hHHHHHHH---hCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024145           17 VAIITGGASGIGAMAVELFHENGA-KVVIADVQDK---LGEDLADK---LGQDVCYIHCDISNEDEVINLVDTAVSKFGK   89 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~---~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (272)
                      ++||||+.||||..+++.|+++|. +|++++|+..   ..+...++   .+.++.++++|++|+++++++++++.+++++
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~   81 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP   81 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence            799999999999999999999986 7999999832   22233333   3678999999999999999999999999999


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHH
Q 024145           90 LDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYG  169 (272)
Q Consensus        90 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a  169 (272)
                      +|.+||++|....  ..+.+.+.++++.++...+.+..++.+.+.+    .+-..+|.+||..+..+.+++..|+++.+.
T Consensus        82 i~gVih~ag~~~~--~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~----~~l~~~i~~SSis~~~G~~gq~~YaaAN~~  155 (181)
T PF08659_consen   82 IDGVIHAAGVLAD--APIQDQTPDEFDAVLAPKVRGLWNLHEALEN----RPLDFFILFSSISSLLGGPGQSAYAAANAF  155 (181)
T ss_dssp             EEEEEE---------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTT----TTTSEEEEEEEHHHHTT-TTBHHHHHHHHH
T ss_pred             cceeeeeeeeecc--cccccCCHHHHHHHHhhhhhHHHHHHHHhhc----CCCCeEEEECChhHhccCcchHhHHHHHHH
Confidence            9999999998765  7889999999999999999999999887655    344579999999999999999999999999


Q ss_pred             HHHHHHHHHHHhcCCCcEEEEEeCCccc
Q 024145          170 ILGLVKCLAAELGQYGIRVNCVSPYGLA  197 (272)
Q Consensus       170 ~~~~~~~la~e~~~~gi~v~~i~Pg~v~  197 (272)
                      ++.|++.....    |..+.+|+.|..+
T Consensus       156 lda~a~~~~~~----g~~~~sI~wg~W~  179 (181)
T PF08659_consen  156 LDALARQRRSR----GLPAVSINWGAWD  179 (181)
T ss_dssp             HHHHHHHHHHT----TSEEEEEEE-EBS
T ss_pred             HHHHHHHHHhC----CCCEEEEEccccC
Confidence            99998876543    6778888876543

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.88  E-value=4e-20  Score=163.94  Aligned_cols=215  Identities=19%  Similarity=0.178  Sum_probs=153.4

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh--CCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL--GQDVCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      ++..++++|||||+|+||++++++|+++|++|++++|+....+.+....  +.++.++.+|+++.+++.+++.       
T Consensus         6 ~~~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   78 (353)
T PLN02896          6 RESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVK-------   78 (353)
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHc-------
Confidence            4457789999999999999999999999999999988766554444333  3468899999999999877664       


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHH--HHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccC---------
Q 024145           89 KLDIMYNNAGILDRSFGSILDTPKSDL--ERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAG---------  157 (272)
Q Consensus        89 ~id~lv~~ag~~~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~---------  157 (272)
                      .+|+|||+|+..... ......+.+.+  ..+++.|+.++..+++++.+..   ..++||++||.......         
T Consensus        79 ~~d~Vih~A~~~~~~-~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~---~~~~~v~~SS~~vyg~~~~~~~~~~~  154 (353)
T PLN02896         79 GCDGVFHVAASMEFD-VSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK---TVKRVVFTSSISTLTAKDSNGRWRAV  154 (353)
T ss_pred             CCCEEEECCccccCC-ccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcC---CccEEEEEechhhccccccCCCCCCc
Confidence            589999999976431 11122233333  4577888899999999887642   23579999997543211         


Q ss_pred             ----------------CCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHh---hc
Q 024145          158 ----------------LGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMS---QM  218 (272)
Q Consensus       158 ----------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~---~~  218 (272)
                                      +....|+.||.+.+.+++.++++   .|+.+.+++|+.+.+|.....  .+........   ..
T Consensus       155 ~~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~vyGp~~~~~--~~~~~~~~~~~~~g~  229 (353)
T PLN02896        155 VDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKE---NGIDLVSVITTTVAGPFLTPS--VPSSIQVLLSPITGD  229 (353)
T ss_pred             cCcccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCcCCC--CCchHHHHHHHhcCC
Confidence                            01137999999999999998877   489999999999999865421  1111111111   10


Q ss_pred             CCC------------CCCCCChHhHHHHHHHHhcC
Q 024145          219 GNL------------KGEFLKTDGIANAALYLASD  241 (272)
Q Consensus       219 ~~~------------~~~~~~~~dva~~~~~l~s~  241 (272)
                      ...            .+.|..++|++++++.++..
T Consensus       230 ~~~~~~~~~~~~~~~~~dfi~v~Dva~a~~~~l~~  264 (353)
T PLN02896        230 SKLFSILSAVNSRMGSIALVHIEDICDAHIFLMEQ  264 (353)
T ss_pred             ccccccccccccccCceeEEeHHHHHHHHHHHHhC
Confidence            000            12578999999999998864

>PLN02650 dihydroflavonol-4-reductase

Probab=99.88  E-value=8.7e-21  Score=168.01  Aligned_cols=208  Identities=20%  Similarity=0.162  Sum_probs=150.5

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh-----CCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL-----GQDVCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      .+|++|||||+|+||++++++|+++|++|++++|+...........     ..++.++.+|+++.++++++++       
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~-------   76 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIR-------   76 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHh-------
Confidence            4579999999999999999999999999999988766554433221     1257889999999998877665       


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccC----C------
Q 024145           89 KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAG----L------  158 (272)
Q Consensus        89 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~----~------  158 (272)
                      .+|+|||+|+....     ..  .+...+.+++|+.+++++++++.+..   ..++||++||.....+.    +      
T Consensus        77 ~~d~ViH~A~~~~~-----~~--~~~~~~~~~~Nv~gt~~ll~aa~~~~---~~~r~v~~SS~~~~~~~~~~~~~~~E~~  146 (351)
T PLN02650         77 GCTGVFHVATPMDF-----ES--KDPENEVIKPTVNGMLSIMKACAKAK---TVRRIVFTSSAGTVNVEEHQKPVYDEDC  146 (351)
T ss_pred             CCCEEEEeCCCCCC-----CC--CCchhhhhhHHHHHHHHHHHHHHhcC---CceEEEEecchhhcccCCCCCCccCccc
Confidence            58999999985421     11  12235778999999999999987643   13579999997432210    0      


Q ss_pred             ------------CCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHH--HhhcC-----
Q 024145          159 ------------GSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESS--MSQMG-----  219 (272)
Q Consensus       159 ------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~--~~~~~-----  219 (272)
                                  ....|+.||.+.+.+++.++.+   +|++++.++|+.+.+|...... ........  .....     
T Consensus       147 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~ilRp~~v~Gp~~~~~~-~~~~~~~~~~~~~~~~~~~~  222 (351)
T PLN02650        147 WSDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAAE---NGLDFISIIPTLVVGPFISTSM-PPSLITALSLITGNEAHYSI  222 (351)
T ss_pred             CCchhhhhccccccchHHHHHHHHHHHHHHHHHH---cCCeEEEECCCceECCCCCCCC-CccHHHHHHHhcCCccccCc
Confidence                        1137999999999999999887   5899999999999999754211 11111111  11100     


Q ss_pred             CCCCCCCChHhHHHHHHHHhcCC
Q 024145          220 NLKGEFLKTDGIANAALYLASDE  242 (272)
Q Consensus       220 ~~~~~~~~~~dva~~~~~l~s~~  242 (272)
                      ...+.+..++|++++++.++...
T Consensus       223 ~~~r~~v~V~Dva~a~~~~l~~~  245 (351)
T PLN02650        223 IKQGQFVHLDDLCNAHIFLFEHP  245 (351)
T ss_pred             CCCcceeeHHHHHHHHHHHhcCc
Confidence            01257899999999999988653

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.88  E-value=4.3e-20  Score=162.76  Aligned_cols=213  Identities=17%  Similarity=0.139  Sum_probs=151.0

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHH--HHhC--CceEEEEecCCCHHHHHHHHHHHHH
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLA--DKLG--QDVCYIHCDISNEDEVINLVDTAVS   85 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~--~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~   85 (272)
                      +.++++|++|||||+|+||++++++|+++|++|+++.|+........  ..+.  .++.++.+|++|.+++.+++.    
T Consensus         4 ~~~~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----   79 (338)
T PLN00198          4 LTPTGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIA----   79 (338)
T ss_pred             ccCCCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHh----
Confidence            34567899999999999999999999999999988888765433221  1121  258889999999998877664    


Q ss_pred             HhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccC--------
Q 024145           86 KFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAG--------  157 (272)
Q Consensus        86 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~--------  157 (272)
                         ++|+|||+|+....     .  ..+.....+++|+.++..+++++.+..   +.++||++||.......        
T Consensus        80 ---~~d~vih~A~~~~~-----~--~~~~~~~~~~~nv~g~~~ll~a~~~~~---~~~~~v~~SS~~~~g~~~~~~~~~~  146 (338)
T PLN00198         80 ---GCDLVFHVATPVNF-----A--SEDPENDMIKPAIQGVHNVLKACAKAK---SVKRVILTSSAAAVSINKLSGTGLV  146 (338)
T ss_pred             ---cCCEEEEeCCCCcc-----C--CCChHHHHHHHHHHHHHHHHHHHHhcC---CccEEEEeecceeeeccCCCCCCce
Confidence               58999999985321     1  123345678999999999999886632   24689999997643211        


Q ss_pred             ----------------CCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCC-hhHHHHHHhhcC-
Q 024145          158 ----------------LGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVD-PALIESSMSQMG-  219 (272)
Q Consensus       158 ----------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~-~~~~~~~~~~~~-  219 (272)
                                      +....|+.||.+.+.+++.++.+   +|+.+..++|+.+.+|........ ............ 
T Consensus       147 ~~E~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~~~~  223 (338)
T PLN00198        147 MNEKNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEE---NNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNEF  223 (338)
T ss_pred             eccccCCchhhhhhcCCccchhHHHHHHHHHHHHHHHHh---cCceEEEEeCCceECCCccCCCCCcHHHHHHHHcCCcc
Confidence                            12346999999999999998877   589999999999999864321111 011111111100 


Q ss_pred             C-------C----CCCCCChHhHHHHHHHHhcCC
Q 024145          220 N-------L----KGEFLKTDGIANAALYLASDE  242 (272)
Q Consensus       220 ~-------~----~~~~~~~~dva~~~~~l~s~~  242 (272)
                      .       .    ...+..++|++++++.++...
T Consensus       224 ~~~g~~~~~~~~~~~~~i~V~D~a~a~~~~~~~~  257 (338)
T PLN00198        224 LINGLKGMQMLSGSISITHVEDVCRAHIFLAEKE  257 (338)
T ss_pred             ccccccccccccCCcceeEHHHHHHHHHHHhhCc
Confidence            0       0    136889999999999888653

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.87  E-value=2.9e-20  Score=164.53  Aligned_cols=234  Identities=17%  Similarity=0.087  Sum_probs=163.5

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHH----HHHHh----CCceEEEEecCCCHHHHHHHHHH
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGED----LADKL----GQDVCYIHCDISNEDEVINLVDT   82 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~----~~~~~----~~~~~~~~~D~~~~~~~~~~~~~   82 (272)
                      ..+++|++|||||+|.||++++++|+++|++|++++|.......    .....    ..++.++.+|+.|.+++.++++ 
T Consensus        11 ~~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~-   89 (348)
T PRK15181         11 LVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK-   89 (348)
T ss_pred             ccccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh-
Confidence            45678999999999999999999999999999999886543221    11111    1357889999999988777665 


Q ss_pred             HHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccC-----
Q 024145           83 AVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAG-----  157 (272)
Q Consensus        83 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~-----  157 (272)
                            .+|+|||.|+.....      .+.++....+++|+.++.++++.+...    +-.++|++||.......     
T Consensus        90 ------~~d~ViHlAa~~~~~------~~~~~~~~~~~~Nv~gt~nll~~~~~~----~~~~~v~~SS~~vyg~~~~~~~  153 (348)
T PRK15181         90 ------NVDYVLHQAALGSVP------RSLKDPIATNSANIDGFLNMLTAARDA----HVSSFTYAASSSTYGDHPDLPK  153 (348)
T ss_pred             ------CCCEEEECccccCch------hhhhCHHHHHHHHHHHHHHHHHHHHHc----CCCeEEEeechHhhCCCCCCCC
Confidence                  589999999965321      122334567999999999999987652    33579999987432211     


Q ss_pred             ------CCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCC----CChhHHHHHHhhcC-CC-----
Q 024145          158 ------LGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGG----VDPALIESSMSQMG-NL-----  221 (272)
Q Consensus       158 ------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~----~~~~~~~~~~~~~~-~~-----  221 (272)
                            .....|+.||.+.+.+++.++.+   +|+++..++|+.+.+|......    ..+..+........ ..     
T Consensus       154 ~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~  230 (348)
T PRK15181        154 IEERIGRPLSPYAVTKYVNELYADVFARS---YEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGS  230 (348)
T ss_pred             CCCCCCCCCChhhHHHHHHHHHHHHHHHH---hCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCC
Confidence                  12347999999999999888766   5899999999999998653211    11222223222111 11     


Q ss_pred             -CCCCCChHhHHHHHHHHhcCCCCCccccEEEecCceeeccCcc
Q 024145          222 -KGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVVNPTV  264 (272)
Q Consensus       222 -~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~~  264 (272)
                       .+.++..+|++++++.++........|+.|++.+|...+.-.+
T Consensus       231 ~~rd~i~v~D~a~a~~~~~~~~~~~~~~~~yni~~g~~~s~~e~  274 (348)
T PRK15181        231 TSRDFCYIENVIQANLLSATTNDLASKNKVYNVAVGDRTSLNEL  274 (348)
T ss_pred             ceEeeEEHHHHHHHHHHHHhcccccCCCCEEEecCCCcEeHHHH
Confidence             1467889999999987664322223688999998876654333

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.87  E-value=4.7e-20  Score=161.22  Aligned_cols=219  Identities=18%  Similarity=0.162  Sum_probs=153.5

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHH--h---CCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADK--L---GQDVCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~--~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      +||++|||||+|+||++++++|+++|++|+++.|+..........  .   ..++.++.+|++++++++++++       
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVD-------   75 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHc-------
Confidence            478999999999999999999999999999988876543322211  1   2368899999999998877765       


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccccc-cc-C---------
Q 024145           89 KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTE-IA-G---------  157 (272)
Q Consensus        89 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~-~~-~---------  157 (272)
                      ++|+|||+|+....   ..    .+...+.+++|+.++.++++++....   +-.+||++||..+. ++ .         
T Consensus        76 ~~d~Vih~A~~~~~---~~----~~~~~~~~~~nv~gt~~ll~a~~~~~---~~~~~v~~SS~~~~~y~~~~~~~~~~~~  145 (322)
T PLN02662         76 GCEGVFHTASPFYH---DV----TDPQAELIDPAVKGTLNVLRSCAKVP---SVKRVVVTSSMAAVAYNGKPLTPDVVVD  145 (322)
T ss_pred             CCCEEEEeCCcccC---CC----CChHHHHHHHHHHHHHHHHHHHHhCC---CCCEEEEccCHHHhcCCCcCCCCCCcCC
Confidence            68999999986422   00    11224788999999999999887532   23589999997532 11 1         


Q ss_pred             ------C-----CCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCC-CChhHHHHHHhhc---CCCC
Q 024145          158 ------L-----GSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGG-VDPALIESSMSQM---GNLK  222 (272)
Q Consensus       158 ------~-----~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~-~~~~~~~~~~~~~---~~~~  222 (272)
                            +     ....|+.+|.+.+.+++.+..+   +|+++..++|+.+.+|...... .......+.....   ....
T Consensus       146 E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (322)
T PLN02662        146 ETWFSDPAFCEESKLWYVLSKTLAEEAAWKFAKE---NGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQTFPNAS  222 (322)
T ss_pred             cccCCChhHhhcccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCccCCCCC
Confidence                  0     0137999999999999888776   5899999999999998754211 1122222222211   1112


Q ss_pred             CCCCChHhHHHHHHHHhcCCCCCccccEEEecC
Q 024145          223 GEFLKTDGIANAALYLASDESSYVSGQNLVVDG  255 (272)
Q Consensus       223 ~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dg  255 (272)
                      ..+..++|+|++++.++.....  .|. +++.|
T Consensus       223 ~~~i~v~Dva~a~~~~~~~~~~--~~~-~~~~g  252 (322)
T PLN02662        223 YRWVDVRDVANAHIQAFEIPSA--SGR-YCLVE  252 (322)
T ss_pred             cCeEEHHHHHHHHHHHhcCcCc--CCc-EEEeC
Confidence            4688999999999988865322  354 45543

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.86  E-value=2.3e-20  Score=164.77  Aligned_cols=230  Identities=13%  Similarity=0.044  Sum_probs=151.8

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcch-----HHHHHHHh----CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024145           16 KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKL-----GEDLADKL----GQDVCYIHCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~-----~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (272)
                      |++|||||+|+||++++++|+++|++|++++|+...     .+.+.+..    +.++.++.+|++|.+++.++++..   
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~---   77 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEI---   77 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhC---
Confidence            689999999999999999999999999999987542     22221111    245889999999999998888754   


Q ss_pred             hCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccc-----------
Q 024145           87 FGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEI-----------  155 (272)
Q Consensus        87 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~-----------  155 (272)
                        ++|+|||+|+.....      ...+.....+++|+.++..+++++.+.-.+ +..++|++||.....           
T Consensus        78 --~~d~ViH~Aa~~~~~------~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~-~~~~~v~~SS~~vyg~~~~~~~~E~~  148 (343)
T TIGR01472        78 --KPTEIYNLAAQSHVK------VSFEIPEYTADVDGIGTLRLLEAVRTLGLI-KSVKFYQASTSELYGKVQEIPQNETT  148 (343)
T ss_pred             --CCCEEEECCcccccc------hhhhChHHHHHHHHHHHHHHHHHHHHhCCC-cCeeEEEeccHHhhCCCCCCCCCCCC
Confidence              589999999975431      122234567789999999999998874322 124789998864321           


Q ss_pred             cCCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCC---hhHHHHHHhhc--------CCCCCC
Q 024145          156 AGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVD---PALIESSMSQM--------GNLKGE  224 (272)
Q Consensus       156 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~---~~~~~~~~~~~--------~~~~~~  224 (272)
                      +......|+.||.+.+.+++.++.++   |+.+....+..+.+|........   ...........        ......
T Consensus       149 ~~~p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd  225 (343)
T TIGR01472       149 PFYPRSPYAAAKLYAHWITVNYREAY---GLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRD  225 (343)
T ss_pred             CCCCCChhHHHHHHHHHHHHHHHHHh---CCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccC
Confidence            12244689999999999999998875   34333333333333321110000   11111111111        112257


Q ss_pred             CCChHhHHHHHHHHhcCCCCCccccEEEecCceeeccCcc
Q 024145          225 FLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVVNPTV  264 (272)
Q Consensus       225 ~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~~  264 (272)
                      |...+|++++++.++....    +..|++.+|...+...+
T Consensus       226 ~i~V~D~a~a~~~~~~~~~----~~~yni~~g~~~s~~e~  261 (343)
T TIGR01472       226 WGHAKDYVEAMWLMLQQDK----PDDYVIATGETHSVREF  261 (343)
T ss_pred             ceeHHHHHHHHHHHHhcCC----CccEEecCCCceeHHHH
Confidence            8899999999988775432    34789988876544333

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN02686 cinnamoyl-CoA reductase

Probab=99.85  E-value=1.5e-19  Score=160.91  Aligned_cols=228  Identities=12%  Similarity=0.097  Sum_probs=153.9

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHH--h------CCceEEEEecCCCHHHHHHHHH
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADK--L------GQDVCYIHCDISNEDEVINLVD   81 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~--~------~~~~~~~~~D~~~~~~~~~~~~   81 (272)
                      ..+.++|++|||||+|+||++++++|+++|++|+++.|+....+.+.+.  .      +..+.++.+|++|.+++.++++
T Consensus        48 ~~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~  127 (367)
T PLN02686         48 GADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFD  127 (367)
T ss_pred             ccCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHH
Confidence            3467899999999999999999999999999999888876554443221  0      1257889999999999888776


Q ss_pred             HHHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccc-ccc----
Q 024145           82 TAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACT-EIA----  156 (272)
Q Consensus        82 ~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~-~~~----  156 (272)
                             .+|.+||.++....  .....    ......++|+.++..+++++...-   +-.++|++||..+ .++    
T Consensus       128 -------~~d~V~hlA~~~~~--~~~~~----~~~~~~~~nv~gt~~llea~~~~~---~v~r~V~~SS~~~~vyg~~~~  191 (367)
T PLN02686        128 -------GCAGVFHTSAFVDP--AGLSG----YTKSMAELEAKASENVIEACVRTE---SVRKCVFTSSLLACVWRQNYP  191 (367)
T ss_pred             -------hccEEEecCeeecc--ccccc----ccchhhhhhHHHHHHHHHHHHhcC---CccEEEEeccHHHhcccccCC
Confidence                   47999999987543  11111    112446778999999998876421   2347999999631 110    


Q ss_pred             C--C----------------CCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhc
Q 024145          157 G--L----------------GSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQM  218 (272)
Q Consensus       157 ~--~----------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~  218 (272)
                      .  +                ....|+.||.+.+.+++.++.+   +|+++++++|+.+.+|.....  .+......+...
T Consensus       192 ~~~~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~gl~~v~lRp~~vyGp~~~~~--~~~~~~~~~~g~  266 (367)
T PLN02686        192 HDLPPVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAARG---KGLKLATICPALVTGPGFFRR--NSTATIAYLKGA  266 (367)
T ss_pred             CCCCcccCCCCCCChhhcccccchHHHHHHHHHHHHHHHHHh---cCceEEEEcCCceECCCCCCC--CChhHHHHhcCC
Confidence            0  0                1236999999999999988877   589999999999999974321  111111222111


Q ss_pred             CCCC----CCCCChHhHHHHHHHHhcCCCCCccccEEEecCceee
Q 024145          219 GNLK----GEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSV  259 (272)
Q Consensus       219 ~~~~----~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~  259 (272)
                      .+..    ..+..++|++++++.++........|..| +..|..+
T Consensus       267 ~~~~g~g~~~~v~V~Dva~A~~~al~~~~~~~~~~~y-i~~g~~~  310 (367)
T PLN02686        267 QEMLADGLLATADVERLAEAHVCVYEAMGNKTAFGRY-ICFDHVV  310 (367)
T ss_pred             CccCCCCCcCeEEHHHHHHHHHHHHhccCCCCCCCcE-EEeCCCc
Confidence            1111    24778999999998887532112245555 4444433

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.85  E-value=9.4e-20  Score=158.54  Aligned_cols=224  Identities=17%  Similarity=0.148  Sum_probs=156.6

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcC--CeEEEeecCcc-hHHHHHHHh--CCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Q 024145           17 VAIITGGASGIGAMAVELFHENG--AKVVIADVQDK-LGEDLADKL--GQDVCYIHCDISNEDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G--~~V~~~~r~~~-~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   91 (272)
                      +++||||+|+||++++++|+++|  ++|++.+|... ...+..+.+  ..++.++.+|++|++++.++++..     ++|
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d   75 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEH-----QPD   75 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhc-----CCC
Confidence            48999999999999999999987  68888776421 111111222  236788999999999998877643     599


Q ss_pred             EEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccccccc------------CCC
Q 024145           92 IMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIA------------GLG  159 (272)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~------------~~~  159 (272)
                      +|||+|+....      +.+.+.++..+++|+.++..+++++...+.   ..++|++||......            ...
T Consensus        76 ~vi~~a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~  146 (317)
T TIGR01181        76 AVVHFAAESHV------DRSISGPAAFIETNVVGTYTLLEAVRKYWH---EFRFHHISTDEVYGDLEKGDAFTETTPLAP  146 (317)
T ss_pred             EEEEcccccCc------hhhhhCHHHHHHHHHHHHHHHHHHHHhcCC---CceEEEeeccceeCCCCCCCCcCCCCCCCC
Confidence            99999986432      123455677899999999999998876542   246999998542211            113


Q ss_pred             CchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhc-CCC------CCCCCChHhHH
Q 024145          160 SPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQM-GNL------KGEFLKTDGIA  232 (272)
Q Consensus       160 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~-~~~------~~~~~~~~dva  232 (272)
                      ...|+.+|.+.+.+++.++.+   .++++..++|+.+..|........+.......... .+.      ...+...+|++
T Consensus       147 ~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a  223 (317)
T TIGR01181       147 SSPYSASKAASDHLVRAYHRT---YGLPALITRCSNNYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHC  223 (317)
T ss_pred             CCchHHHHHHHHHHHHHHHHH---hCCCeEEEEeccccCCCCCcccHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHH
Confidence            347999999999999998887   47899999999998876432111112222222211 111      12467899999


Q ss_pred             HHHHHHhcCCCCCccccEEEecCceeec
Q 024145          233 NAALYLASDESSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       233 ~~~~~l~s~~~~~~~G~~i~~dgG~~~~  260 (272)
                      +++..++...   ..|+.|++.++..+.
T Consensus       224 ~~~~~~~~~~---~~~~~~~~~~~~~~s  248 (317)
T TIGR01181       224 RAIYLVLEKG---RVGETYNIGGGNERT  248 (317)
T ss_pred             HHHHHHHcCC---CCCceEEeCCCCcee
Confidence            9999888643   357889998876654

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PLN02240 UDP-glucose 4-epimerase

Probab=99.85  E-value=2.9e-19  Score=158.18  Aligned_cols=236  Identities=15%  Similarity=0.172  Sum_probs=159.1

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHH----HHHHH---hCCceEEEEecCCCHHHHHHHHHHHH
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGE----DLADK---LGQDVCYIHCDISNEDEVINLVDTAV   84 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~----~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~   84 (272)
                      .|++|++|||||+|+||++++++|+++|++|++++|......    ...+.   .+.++.++.+|++++++++.+++.. 
T Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~-   80 (352)
T PLN02240          2 SLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAST-   80 (352)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhC-
Confidence            467899999999999999999999999999999887543221    11111   1346789999999999998877642 


Q ss_pred             HHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccc---------
Q 024145           85 SKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEI---------  155 (272)
Q Consensus        85 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~---------  155 (272)
                          .+|+|||+|+....      ..+.+++.+.+++|+.++..+++++..    .+..++|++||.....         
T Consensus        81 ----~~d~vih~a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~vyg~~~~~~~~E  146 (352)
T PLN02240         81 ----RFDAVIHFAGLKAV------GESVAKPLLYYDNNLVGTINLLEVMAK----HGCKKLVFSSSATVYGQPEEVPCTE  146 (352)
T ss_pred             ----CCCEEEEccccCCc------cccccCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEccHHHhCCCCCCCCCC
Confidence                69999999996432      113346778999999999999886643    3345799999964321         


Q ss_pred             --cCCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccC-----CCCCh----hHHHHHHhhcC-----
Q 024145          156 --AGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMK-----GGVDP----ALIESSMSQMG-----  219 (272)
Q Consensus       156 --~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~-----~~~~~----~~~~~~~~~~~-----  219 (272)
                        +......|+.||.+.+.+++.++.+  ..++.+..++|+.+..+....     ....+    ...........     
T Consensus       147 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (352)
T PLN02240        147 EFPLSATNPYGRTKLFIEEICRDIHAS--DPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTV  224 (352)
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHh--cCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEE
Confidence              1123568999999999999988765  246788888876665542110     00000    11222211110     


Q ss_pred             ----------CCCCCCCChHhHHHHHHHHhcCC--CCCccccEEEecCceeeccCcc
Q 024145          220 ----------NLKGEFLKTDGIANAALYLASDE--SSYVSGQNLVVDGGFSVVNPTV  264 (272)
Q Consensus       220 ----------~~~~~~~~~~dva~~~~~l~s~~--~~~~~G~~i~~dgG~~~~~~~~  264 (272)
                                .....+..++|++++++.++...  .....|+.+++.+|..++.-.+
T Consensus       225 ~g~~~~~~~g~~~~~~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~~~~s~~el  281 (352)
T PLN02240        225 FGNDYPTKDGTGVRDYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGTGKGTSVLEM  281 (352)
T ss_pred             eCCCCCCCCCCEEEeeEEHHHHHHHHHHHHhhhhhccCCCCceEEccCCCcEeHHHH
Confidence                      01124678999999988776431  1224578999988877654333

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.84  E-value=3.2e-19  Score=148.04  Aligned_cols=226  Identities=18%  Similarity=0.145  Sum_probs=170.4

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCC--eEEEeecCc--chHHHHHHHhC-CceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           16 KVAIITGGASGIGAMAVELFHENGA--KVVIADVQD--KLGEDLADKLG-QDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~--~V~~~~r~~--~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      +++|||||.|+||.++++.+.++.-  +|+.++.-.  ...+.+..-.+ .++.+++.|++|.+.+..++.+-     .+
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~-----~~   75 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEY-----QP   75 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhc-----CC
Confidence            4789999999999999999999854  466665421  12223333223 58999999999999988777754     69


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecc--ccc-----------ccC
Q 024145           91 DIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASA--CTE-----------IAG  157 (272)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~--~~~-----------~~~  157 (272)
                      |+++|.|+-++.      +-+.+.....+++|+.|++.+++++..+..+   -|++.||.-  .|.           .++
T Consensus        76 D~VvhfAAESHV------DRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~---frf~HISTDEVYG~l~~~~~~FtE~tp~  146 (340)
T COG1088          76 DAVVHFAAESHV------DRSIDGPAPFIQTNVVGTYTLLEAARKYWGK---FRFHHISTDEVYGDLGLDDDAFTETTPY  146 (340)
T ss_pred             CeEEEechhccc------cccccChhhhhhcchHHHHHHHHHHHHhccc---ceEEEeccccccccccCCCCCcccCCCC
Confidence            999999986553      4566777889999999999999999887643   468888763  121           245


Q ss_pred             CCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCC-------CCCCCChHh
Q 024145          158 LGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNL-------KGEFLKTDG  230 (272)
Q Consensus       158 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~d  230 (272)
                      .++++|++||++..+|++++.+.   +|+.+....|.....|-.-..+.-|..+...+.....+       .+.+..++|
T Consensus       147 ~PsSPYSASKAasD~lVray~~T---Yglp~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeD  223 (340)
T COG1088         147 NPSSPYSASKAASDLLVRAYVRT---YGLPATITRCSNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGLQIRDWLYVED  223 (340)
T ss_pred             CCCCCcchhhhhHHHHHHHHHHH---cCCceEEecCCCCcCCCcCchhhhHHHHHHHHcCCCCceecCCcceeeeEEeHh
Confidence            57789999999999999999999   58999999999988887654333344444444333222       367889999


Q ss_pred             HHHHHHHHhcCCCCCccccEEEecCceeecc
Q 024145          231 IANAALYLASDESSYVSGQNLVVDGGFSVVN  261 (272)
Q Consensus       231 va~~~~~l~s~~~~~~~G~~i~~dgG~~~~~  261 (272)
                      -+.++..++....   -|++++++||.-..+
T Consensus       224 h~~ai~~Vl~kg~---~GE~YNIgg~~E~~N  251 (340)
T COG1088         224 HCRAIDLVLTKGK---IGETYNIGGGNERTN  251 (340)
T ss_pred             HHHHHHHHHhcCc---CCceEEeCCCccchH
Confidence            9999998886533   499999999987643

>PRK06720 hypothetical protein; Provisional

Probab=99.84  E-value=1.4e-19  Score=143.56  Aligned_cols=141  Identities=21%  Similarity=0.431  Sum_probs=114.4

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      +++++|+++||||++|||+++++.|+++|++|++++|+.+..++..+++   +..+.++.+|+++.++++++++++.+.+
T Consensus        12 ~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~   91 (169)
T PRK06720         12 MKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAF   91 (169)
T ss_pred             cccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            4578999999999999999999999999999999999877665554444   5567889999999999999999999999


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCC-------CCceEEEEecccccc
Q 024145           88 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQ-------QKGCILFTASACTEI  155 (272)
Q Consensus        88 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-------~~g~iv~iss~~~~~  155 (272)
                      |++|++|||||..... ..+.+.++++ ++  .+|+.+.+..++.+.++|.++       +.||+..+|+.+...
T Consensus        92 G~iDilVnnAG~~~~~-~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (169)
T PRK06720         92 SRIDMLFQNAGLYKID-SIFSRQQEND-SN--VLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQSF  162 (169)
T ss_pred             CCCCEEEECCCcCCCC-CcccccchhH-hh--ceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEeccccccc
Confidence            9999999999986642 4455545555 44  666777788888888887653       568888888876544

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.83  E-value=3.8e-19  Score=152.38  Aligned_cols=220  Identities=20%  Similarity=0.198  Sum_probs=155.9

Q ss_pred             EEeCCCChHHHHHHHHHHHcC--CeEEEeecCcchHH-HHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEe
Q 024145           19 IITGGASGIGAMAVELFHENG--AKVVIADVQDKLGE-DLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYN   95 (272)
Q Consensus        19 lItGas~giG~aia~~la~~G--~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~   95 (272)
                      |||||+|+||++++++|+++|  ++|.++++.+.... ...... ....++.+|++|.++++++++       +.|+|||
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~~-~~~~~~~~Di~d~~~l~~a~~-------g~d~V~H   72 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQKS-GVKEYIQGDITDPESLEEALE-------GVDVVFH   72 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhcc-cceeEEEeccccHHHHHHHhc-------CCceEEE
Confidence            699999999999999999999  68888887665432 111222 233489999999999988877       7899999


Q ss_pred             CCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccccccc---C--------------C
Q 024145           96 NAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIA---G--------------L  158 (272)
Q Consensus        96 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~---~--------------~  158 (272)
                      .|+.....       .....++.+++|+.|+-++++++...    +-.++|++||......   .              .
T Consensus        73 ~Aa~~~~~-------~~~~~~~~~~vNV~GT~nvl~aa~~~----~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~  141 (280)
T PF01073_consen   73 TAAPVPPW-------GDYPPEEYYKVNVDGTRNVLEAARKA----GVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSS  141 (280)
T ss_pred             eCcccccc-------CcccHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEEcCcceeEeccCCCCcccCCcCCccccc
Confidence            99875431       13456789999999999999998764    4457999999876443   0              1


Q ss_pred             CCchhhhhHHHHHHHHHHHHH-Hhc-CCCcEEEEEeCCcccCCcccCCCCChhHHHHHHh-h-----cC--CCCCCCCCh
Q 024145          159 GSPAYTISKYGILGLVKCLAA-ELG-QYGIRVNCVSPYGLATGMSMKGGVDPALIESSMS-Q-----MG--NLKGEFLKT  228 (272)
Q Consensus       159 ~~~~Y~~sK~a~~~~~~~la~-e~~-~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~-~-----~~--~~~~~~~~~  228 (272)
                      ....|+.||+..|.++..... ++. ...+...+|+|..+..|......   +...+... .     ..  .....+..+
T Consensus       142 ~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~---~~~~~~~~~g~~~~~~g~~~~~~~~vyV  218 (280)
T PF01073_consen  142 PLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLV---PRLVKMVRSGLFLFQIGDGNNLFDFVYV  218 (280)
T ss_pred             ccCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCccccccc---chhhHHHHhcccceeecCCCceECcEeH
Confidence            234799999999999888765 111 12489999999999998754311   11111111 1     01  011346789


Q ss_pred             HhHHHHHHHHhc---CC--CCCccccEEEecCceeec
Q 024145          229 DGIANAALYLAS---DE--SSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       229 ~dva~~~~~l~s---~~--~~~~~G~~i~~dgG~~~~  260 (272)
                      +++|.+++....   +.  ...+.||.|.+.+|.-..
T Consensus       219 ~NvA~ahvlA~~~L~~~~~~~~~~G~~y~itd~~p~~  255 (280)
T PF01073_consen  219 ENVAHAHVLAAQALLEPGKPERVAGQAYFITDGEPVP  255 (280)
T ss_pred             HHHHHHHHHHHHHhccccccccCCCcEEEEECCCccC
Confidence            999999875442   22  355899999999886543

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.83  E-value=5.1e-19  Score=156.69  Aligned_cols=225  Identities=17%  Similarity=0.148  Sum_probs=154.9

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCe-EEEeecCc--chHHHHHHHh--CCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Q 024145           17 VAIITGGASGIGAMAVELFHENGAK-VVIADVQD--KLGEDLADKL--GQDVCYIHCDISNEDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~~-V~~~~r~~--~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   91 (272)
                      ++|||||+|+||++++++|+++|++ |+.+++..  ...+... .+  +.++.++.+|++|.+++++++++.     ++|
T Consensus         2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d   75 (352)
T PRK10084          2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLA-DVSDSERYVFEHADICDRAELDRIFAQH-----QPD   75 (352)
T ss_pred             eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHH-hcccCCceEEEEecCCCHHHHHHHHHhc-----CCC
Confidence            5899999999999999999999976 55455432  1122222 22  245788999999999998888642     699


Q ss_pred             EEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCC-----CCceEEEEecccccc-----------
Q 024145           92 IMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQ-----QKGCILFTASACTEI-----------  155 (272)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~g~iv~iss~~~~~-----------  155 (272)
                      +|||+||....  .    .+.+..++.+++|+.++..+++++.++|...     +..++|++||.....           
T Consensus        76 ~vih~A~~~~~--~----~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~  149 (352)
T PRK10084         76 AVMHLAAESHV--D----RSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENS  149 (352)
T ss_pred             EEEECCcccCC--c----chhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCcccccccc
Confidence            99999996432  1    1122346789999999999999998876321     234799998864321           


Q ss_pred             ----------cCCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhc-CCC---
Q 024145          156 ----------AGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQM-GNL---  221 (272)
Q Consensus       156 ----------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~-~~~---  221 (272)
                                +......|+.||.+.+.+++.++.++   |+.+..+.|+.+.+|........+.......... .+.   
T Consensus       150 ~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (352)
T PRK10084        150 EELPLFTETTAYAPSSPYSASKASSDHLVRAWLRTY---GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGK  226 (352)
T ss_pred             ccCCCccccCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeccceeCCCcCccchHHHHHHHHhcCCCeEEeCC
Confidence                      11234589999999999999998874   6778888998888876321111111222222111 011   


Q ss_pred             ---CCCCCChHhHHHHHHHHhcCCCCCccccEEEecCceee
Q 024145          222 ---KGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSV  259 (272)
Q Consensus       222 ---~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~  259 (272)
                         ...++.++|++.++..++...   ..|+.|++.++...
T Consensus       227 g~~~~~~v~v~D~a~a~~~~l~~~---~~~~~yni~~~~~~  264 (352)
T PRK10084        227 GDQIRDWLYVEDHARALYKVVTEG---KAGETYNIGGHNEK  264 (352)
T ss_pred             CCeEEeeEEHHHHHHHHHHHHhcC---CCCceEEeCCCCcC
Confidence               245789999999998877543   24788999887654

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.83  E-value=1.1e-18  Score=152.70  Aligned_cols=215  Identities=19%  Similarity=0.155  Sum_probs=152.6

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEe
Q 024145           16 KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYN   95 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~   95 (272)
                      ++++||||+|+||++++++|+++|++|++++|+++......   ...+.++.+|+++.++++++++       .+|++||
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~D~~~~~~l~~~~~-------~~d~vi~   70 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLE---GLDVEIVEGDLRDPASLRKAVA-------GCRALFH   70 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccccc---cCCceEEEeeCCCHHHHHHHHh-------CCCEEEE
Confidence            37999999999999999999999999999999766432211   2358889999999998877765       6899999


Q ss_pred             CCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCC---------------CC
Q 024145           96 NAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGL---------------GS  160 (272)
Q Consensus        96 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~---------------~~  160 (272)
                      +++....        ..+++...+++|+.++..+++++..    .+-+++|++||.......+               ..
T Consensus        71 ~a~~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~  138 (328)
T TIGR03466        71 VAADYRL--------WAPDPEEMYAANVEGTRNLLRAALE----AGVERVVYTSSVATLGVRGDGTPADETTPSSLDDMI  138 (328)
T ss_pred             eceeccc--------CCCCHHHHHHHHHHHHHHHHHHHHH----hCCCeEEEEechhhcCcCCCCCCcCccCCCCccccc
Confidence            9985321        1123567889999999999998765    2345799999975543211               12


Q ss_pred             chhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCC----CCCCCCChHhHHHHHH
Q 024145          161 PAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGN----LKGEFLKTDGIANAAL  236 (272)
Q Consensus       161 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~dva~~~~  236 (272)
                      ..|+.+|.+.+.+++.++.+   .|+.+..++|+.+.++...........+........+    ....+...+|++++++
T Consensus       139 ~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~  215 (328)
T TIGR03466       139 GHYKRSKFLAEQAALEMAAE---KGLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMPAYVDTGLNLVHVDDVAEGHL  215 (328)
T ss_pred             ChHHHHHHHHHHHHHHHHHh---cCCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCCceeeCCCcceEEHHHHHHHHH
Confidence            47999999999999998776   5899999999999877543111111111221111111    1134678999999988


Q ss_pred             HHhcCCCCCccccEEEecCceee
Q 024145          237 YLASDESSYVSGQNLVVDGGFSV  259 (272)
Q Consensus       237 ~l~s~~~~~~~G~~i~~dgG~~~  259 (272)
                      .++...   ..|+.+.++ |..+
T Consensus       216 ~~~~~~---~~~~~~~~~-~~~~  234 (328)
T TIGR03466       216 LALERG---RIGERYILG-GENL  234 (328)
T ss_pred             HHHhCC---CCCceEEec-CCCc
Confidence            877553   267888875 4433

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.82  E-value=3.5e-18  Score=150.44  Aligned_cols=230  Identities=15%  Similarity=0.161  Sum_probs=153.8

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHH---HHh-CCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Q 024145           17 VAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLA---DKL-GQDVCYIHCDISNEDEVINLVDTAVSKFGKLDI   92 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~---~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   92 (272)
                      ++|||||+|+||++++++|+++|++|++++|.........   ... +.++.++.+|++|.++++++++.     .++|+
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~d~   76 (338)
T PRK10675          2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHD-----HAIDT   76 (338)
T ss_pred             eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhc-----CCCCE
Confidence            6899999999999999999999999998876533222221   122 34577889999999998887653     26999


Q ss_pred             EEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccccccc-----------C-CCC
Q 024145           93 MYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIA-----------G-LGS  160 (272)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~-----------~-~~~  160 (272)
                      |||+|+....  ..    ..+...+.+++|+.++..+++++..    .+.+++|++||......           . ...
T Consensus        77 vvh~a~~~~~--~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~  146 (338)
T PRK10675         77 VIHFAGLKAV--GE----SVQKPLEYYDNNVNGTLRLISAMRA----ANVKNLIFSSSATVYGDQPKIPYVESFPTGTPQ  146 (338)
T ss_pred             EEECCccccc--cc----hhhCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEeccHHhhCCCCCCccccccCCCCCC
Confidence            9999987532  11    1233456789999999999887654    34467999999653211           0 235


Q ss_pred             chhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCccc----CC--CCC---hhHHHHHHhhcC------------
Q 024145          161 PAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSM----KG--GVD---PALIESSMSQMG------------  219 (272)
Q Consensus       161 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~----~~--~~~---~~~~~~~~~~~~------------  219 (272)
                      ..|+.+|.+.+.+++.++++.  .++++..++|+.+.++...    ..  ...   ...+........            
T Consensus       147 ~~Y~~sK~~~E~~~~~~~~~~--~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (338)
T PRK10675        147 SPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPT  224 (338)
T ss_pred             ChhHHHHHHHHHHHHHHHHhc--CCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCC
Confidence            689999999999999987764  3577888887666554211    00  000   111122221110            


Q ss_pred             ---CCCCCCCChHhHHHHHHHHhcCCCCCccccEEEecCceeeccCc
Q 024145          220 ---NLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVVNPT  263 (272)
Q Consensus       220 ---~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~  263 (272)
                         .....+...+|++++++.++........|+.+++.+|..+....
T Consensus       225 ~~g~~~~~~v~v~D~a~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e  271 (338)
T PRK10675        225 EDGTGVRDYIHVMDLADGHVAAMEKLANKPGVHIYNLGAGVGSSVLD  271 (338)
T ss_pred             CCCcEEEeeEEHHHHHHHHHHHHHhhhccCCCceEEecCCCceeHHH
Confidence               00135788999999998877542222346899999887665433

>PLN02427 UDP-apiose/xylose synthase

Probab=99.82  E-value=5.6e-18  Score=151.94  Aligned_cols=222  Identities=15%  Similarity=0.132  Sum_probs=151.8

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHc-CCeEEEeecCcchHHHHHHH----hCCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHEN-GAKVVIADVQDKLGEDLADK----LGQDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      .+.+++|||||+|+||++++++|+++ |++|++++|+......+...    ...++.++.+|++|.+++++++.      
T Consensus        12 ~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~------   85 (386)
T PLN02427         12 IKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIK------   85 (386)
T ss_pred             ccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhh------
Confidence            45568999999999999999999998 58999998876554333221    12368899999999998877665      


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccC---------C
Q 024145           88 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAG---------L  158 (272)
Q Consensus        88 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~---------~  158 (272)
                       .+|+|||+|+...+  ....    .+..+.+..|+.++..+++++...    + .++|++||...+...         +
T Consensus        86 -~~d~ViHlAa~~~~--~~~~----~~~~~~~~~n~~gt~~ll~aa~~~----~-~r~v~~SS~~vYg~~~~~~~~e~~p  153 (386)
T PLN02427         86 -MADLTINLAAICTP--ADYN----TRPLDTIYSNFIDALPVVKYCSEN----N-KRLIHFSTCEVYGKTIGSFLPKDHP  153 (386)
T ss_pred             -cCCEEEEcccccCh--hhhh----hChHHHHHHHHHHHHHHHHHHHhc----C-CEEEEEeeeeeeCCCcCCCCCcccc
Confidence             47999999997543  1111    122344667999999998877542    2 579999996432110         0


Q ss_pred             ------------------------CCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCC-------CC
Q 024145          159 ------------------------GSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGG-------VD  207 (272)
Q Consensus       159 ------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~-------~~  207 (272)
                                              ....|+.||.+.+.+++.++..   +|+.+..++|+.+.+|......       ..
T Consensus       154 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~  230 (386)
T PLN02427        154 LRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV  230 (386)
T ss_pred             cccccccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhh---cCCceEEecccceeCCCCCcccccccccccc
Confidence                                    1136999999999999877655   5899999999999998642100       00


Q ss_pred             hhHH----HHHHhhcC-------CCCCCCCChHhHHHHHHHHhcCCCCCccccEEEecCc
Q 024145          208 PALI----ESSMSQMG-------NLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGG  256 (272)
Q Consensus       208 ~~~~----~~~~~~~~-------~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG  256 (272)
                      +..+    ........       .....+...+|++++++.++.... ...|+.|++.+|
T Consensus       231 ~~~i~~~~~~~~~~~~~~~~g~g~~~r~~i~V~Dva~ai~~al~~~~-~~~g~~yni~~~  289 (386)
T PLN02427        231 PRVLACFSNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPA-RANGHIFNVGNP  289 (386)
T ss_pred             chHHHHHHHHHhcCCCeEEECCCCceECcEeHHHHHHHHHHHHhCcc-cccCceEEeCCC
Confidence            1111    11111111       111358899999999998875431 235788999876

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.81  E-value=2.8e-18  Score=143.14  Aligned_cols=214  Identities=20%  Similarity=0.263  Sum_probs=158.4

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCC
Q 024145           18 AIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNA   97 (272)
Q Consensus        18 vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~a   97 (272)
                      ||||||+|.||.+++++|+++|+.|+...|+...........  ++.++.+|+.+.++++++++..     .+|.+||.|
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~--~~~~~~~dl~~~~~~~~~~~~~-----~~d~vi~~a   73 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKL--NVEFVIGDLTDKEQLEKLLEKA-----NIDVVIHLA   73 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHT--TEEEEESETTSHHHHHHHHHHH-----TESEEEEEB
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccc--eEEEEEeecccccccccccccc-----CceEEEEee
Confidence            699999999999999999999999887777766544333322  7899999999999999888866     799999999


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccC-----------CCCchhhhh
Q 024145           98 GILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAG-----------LGSPAYTIS  166 (272)
Q Consensus        98 g~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~-----------~~~~~Y~~s  166 (272)
                      +....      ..+.+.....++.|+.+...+++.+...    +..++|++||.......           .....|+.+
T Consensus        74 ~~~~~------~~~~~~~~~~~~~n~~~~~~ll~~~~~~----~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~~~  143 (236)
T PF01370_consen   74 AFSSN------PESFEDPEEIIEANVQGTRNLLEAAREA----GVKRFIFLSSASVYGDPDGEPIDEDSPINPLSPYGAS  143 (236)
T ss_dssp             SSSSH------HHHHHSHHHHHHHHHHHHHHHHHHHHHH----TTSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHHHH
T ss_pred             ccccc------cccccccccccccccccccccccccccc----ccccccccccccccccccccccccccccccccccccc
Confidence            86421      1223567788899999999998887753    33679999996433221           133569999


Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCc---ccCCCCChhHHHHHHhhc-------CCCCCCCCChHhHHHHHH
Q 024145          167 KYGILGLVKCLAAELGQYGIRVNCVSPYGLATGM---SMKGGVDPALIESSMSQM-------GNLKGEFLKTDGIANAAL  236 (272)
Q Consensus       167 K~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~---~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~dva~~~~  236 (272)
                      |...+.+++.+....   ++++..++|+.+..|.   .......+..........       ......+...+|++++++
T Consensus       144 K~~~e~~~~~~~~~~---~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~  220 (236)
T PF01370_consen  144 KRAAEELLRDYAKKY---GLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIV  220 (236)
T ss_dssp             HHHHHHHHHHHHHHH---TSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHH
T ss_pred             ccccccccccccccc---ccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHH
Confidence            999999999998884   8999999999999998   111111122233332222       111245678999999999


Q ss_pred             HHhcCCCCCccccEEEe
Q 024145          237 YLASDESSYVSGQNLVV  253 (272)
Q Consensus       237 ~l~s~~~~~~~G~~i~~  253 (272)
                      .++....  ..|+.|++
T Consensus       221 ~~~~~~~--~~~~~yNi  235 (236)
T PF01370_consen  221 AALENPK--AAGGIYNI  235 (236)
T ss_dssp             HHHHHSC--TTTEEEEE
T ss_pred             HHHhCCC--CCCCEEEe
Confidence            9987654  57888876

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.81  E-value=7e-18  Score=142.63  Aligned_cols=214  Identities=15%  Similarity=0.154  Sum_probs=138.5

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCH-HHHHHHHHHHHHHhCC
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNE-DEVINLVDTAVSKFGK   89 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g~   89 (272)
                      .+.++|++|||||+|+||++++++|+++|++|+++.|+.+........ +.++.++.+|+++. +++.+.+   .   .+
T Consensus        13 ~~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~l~~~~---~---~~   85 (251)
T PLN00141         13 ENVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQ-DPSLQIVRADVTEGSDKLVEAI---G---DD   85 (251)
T ss_pred             ccccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhccc-CCceEEEEeeCCCCHHHHHHHh---h---cC
Confidence            345679999999999999999999999999999999987655433222 34688999999983 3332222   0   26


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccc---cCCCCchhhhh
Q 024145           90 LDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEI---AGLGSPAYTIS  166 (272)
Q Consensus        90 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~---~~~~~~~Y~~s  166 (272)
                      +|++|+++|..... .+.         ..+++|+.++..+++++..    .+.++||++||.....   +.+....|...
T Consensus        86 ~d~vi~~~g~~~~~-~~~---------~~~~~n~~~~~~ll~a~~~----~~~~~iV~iSS~~v~g~~~~~~~~~~~~~~  151 (251)
T PLN00141         86 SDAVICATGFRRSF-DPF---------APWKVDNFGTVNLVEACRK----AGVTRFILVSSILVNGAAMGQILNPAYIFL  151 (251)
T ss_pred             CCEEEECCCCCcCC-CCC---------CceeeehHHHHHHHHHHHH----cCCCEEEEEccccccCCCcccccCcchhHH
Confidence            99999999864221 111         1246788888888887643    4567899999986422   22334557666


Q ss_pred             HHHHHHH-HHHHHHH-hcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCC
Q 024145          167 KYGILGL-VKCLAAE-LGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESS  244 (272)
Q Consensus       167 K~a~~~~-~~~la~e-~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  244 (272)
                      |.....+ .+..+.+ +...|++++.|+||++.++......   . .    ...........+++|+|+.++.++.....
T Consensus       152 ~~~~~~~~~k~~~e~~l~~~gi~~~iirpg~~~~~~~~~~~---~-~----~~~~~~~~~~i~~~dvA~~~~~~~~~~~~  223 (251)
T PLN00141        152 NLFGLTLVAKLQAEKYIRKSGINYTIVRPGGLTNDPPTGNI---V-M----EPEDTLYEGSISRDQVAEVAVEALLCPES  223 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCcEEEEECCCccCCCCCceE---E-E----CCCCccccCcccHHHHHHHHHHHhcChhh
Confidence            6544433 2333332 4567999999999999876532100   0 0    00000113457999999999999865432


Q ss_pred             CccccEEEecC
Q 024145          245 YVSGQNLVVDG  255 (272)
Q Consensus       245 ~~~G~~i~~dg  255 (272)
                        .+..+.+-+
T Consensus       224 --~~~~~~~~~  232 (251)
T PLN00141        224 --SYKVVEIVA  232 (251)
T ss_pred             --cCcEEEEec
Confidence              344444443

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.81  E-value=1.5e-17  Score=147.44  Aligned_cols=219  Identities=17%  Similarity=0.129  Sum_probs=148.3

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcC--CeEEEeecCcchHH---HHH---HHh-------C-CceEEEEecCCCH------H
Q 024145           17 VAIITGGASGIGAMAVELFHENG--AKVVIADVQDKLGE---DLA---DKL-------G-QDVCYIHCDISNE------D   74 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G--~~V~~~~r~~~~~~---~~~---~~~-------~-~~~~~~~~D~~~~------~   74 (272)
                      ++|||||||+||++++++|+++|  ++|+++.|+.....   .+.   +..       . .++.++.+|++++      +
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            48999999999999999999999  67999998765321   111   111       1 4688999999865      2


Q ss_pred             HHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccccc
Q 024145           75 EVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTE  154 (272)
Q Consensus        75 ~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~  154 (272)
                      +...+.       ..+|++||+|+.....         ..+...+++|+.++..+++.+...    +..+++++||....
T Consensus        81 ~~~~~~-------~~~d~vih~a~~~~~~---------~~~~~~~~~nv~g~~~ll~~a~~~----~~~~~v~iSS~~v~  140 (367)
T TIGR01746        81 EWERLA-------ENVDTIVHNGALVNWV---------YPYSELRAANVLGTREVLRLAASG----RAKPLHYVSTISVL  140 (367)
T ss_pred             HHHHHH-------hhCCEEEeCCcEeccC---------CcHHHHhhhhhHHHHHHHHHHhhC----CCceEEEEcccccc
Confidence            333222       3699999999965321         234667889999999998877652    33459999998654


Q ss_pred             ccC----------------CCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHh--
Q 024145          155 IAG----------------LGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMS--  216 (272)
Q Consensus       155 ~~~----------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~--  216 (272)
                      ...                .....|+.||.+.+.+++.++.    .|+++++++||.+.++.................  
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~  216 (367)
T TIGR01746       141 AAIDLSTVTEDDAIVTPPPGLAGGYAQSKWVAELLVREASD----RGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGC  216 (367)
T ss_pred             CCcCCCCccccccccccccccCCChHHHHHHHHHHHHHHHh----cCCCEEEECCCceeecCCCCCCCchhHHHHHHHHH
Confidence            321                1124799999999999877644    389999999999998632211111121111111  


Q ss_pred             ---hcCCC----CCCCCChHhHHHHHHHHhcCCCCCccccEEEecCceee
Q 024145          217 ---QMGNL----KGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSV  259 (272)
Q Consensus       217 ---~~~~~----~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~  259 (272)
                         ...+.    ...+..++|++++++.++.....+.+|+++++.++..+
T Consensus       217 ~~~~~~p~~~~~~~~~~~vddva~ai~~~~~~~~~~~~~~~~~v~~~~~~  266 (367)
T TIGR01746       217 LALGAYPDSPELTEDLTPVDYVARAIVALSSQPAASAGGPVFHVVNPEPV  266 (367)
T ss_pred             HHhCCCCCCCccccCcccHHHHHHHHHHHHhCCCcccCCceEEecCCCCC
Confidence               11111    12377889999999998866544345899999886544

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.79  E-value=1.3e-17  Score=145.68  Aligned_cols=228  Identities=16%  Similarity=0.118  Sum_probs=154.2

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhC--CceEEEEecCCCHHHHHHHHHHHHHHhCCccEEE
Q 024145           17 VAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLG--QDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMY   94 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv   94 (272)
                      ++|||||+|+||++++++|+++|++|++++|.............  ..+.++.+|+++++++++++..     +++|++|
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~vv   75 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEE-----HKIDAVI   75 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHh-----CCCcEEE
Confidence            47999999999999999999999999888764332222222221  1577889999999999887763     3799999


Q ss_pred             eCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccccccc-----------CCCCchh
Q 024145           95 NNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIA-----------GLGSPAY  163 (272)
Q Consensus        95 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~-----------~~~~~~Y  163 (272)
                      |++|....  .    .+.++..+.++.|+.++..+++++..    .+..++|++||......           ......|
T Consensus        76 ~~ag~~~~--~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~~y  145 (328)
T TIGR01179        76 HFAGLIAV--G----ESVQDPLKYYRNNVVNTLNLLEAMQQ----TGVKKFIFSSSAAVYGEPSSIPISEDSPLGPINPY  145 (328)
T ss_pred             ECccccCc--c----hhhcCchhhhhhhHHHHHHHHHHHHh----cCCCEEEEecchhhcCCCCCCCccccCCCCCCCch
Confidence            99997532  1    12334567789999999999887654    33468999888643211           1133579


Q ss_pred             hhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCC-----CCChhH---HHHHHh-hcC---------C-----
Q 024145          164 TISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKG-----GVDPAL---IESSMS-QMG---------N-----  220 (272)
Q Consensus       164 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~-----~~~~~~---~~~~~~-~~~---------~-----  220 (272)
                      +.+|++++.+++.++.+.  .++++..++|+.+.++.....     ......   ...... ...         +     
T Consensus       146 ~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  223 (328)
T TIGR01179       146 GRSKLMSERILRDLSKAD--PGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGT  223 (328)
T ss_pred             HHHHHHHHHHHHHHHHhc--cCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCc
Confidence            999999999999997762  478999999988887642210     001111   111111 100         0     


Q ss_pred             CCCCCCChHhHHHHHHHHhcCCCCCccccEEEecCceeecc
Q 024145          221 LKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVVN  261 (272)
Q Consensus       221 ~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~  261 (272)
                      ....+...+|++++++.++........|+.|++.++..+..
T Consensus       224 ~~~~~v~~~D~a~~~~~~~~~~~~~~~~~~~n~~~~~~~s~  264 (328)
T TIGR01179       224 CVRDYIHVMDLADAHLAALEYLLNGGESHVYNLGYGQGFSV  264 (328)
T ss_pred             eEEeeeeHHHHHHHHHHHHhhhhcCCCcceEEcCCCCcccH
Confidence            01246788999999998875422223578899887765543

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.79  E-value=3.2e-17  Score=145.04  Aligned_cols=218  Identities=16%  Similarity=0.120  Sum_probs=150.1

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHc-CCeEEEeecCcchHHHHHHHhCCceEEEEecCC-CHHHHHHHHHHHHHHhCCccEE
Q 024145           16 KVAIITGGASGIGAMAVELFHEN-GAKVVIADVQDKLGEDLADKLGQDVCYIHCDIS-NEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      +++|||||+|.||++++++|+++ |++|++++|+......+..  ...+.++.+|++ +.+.+.++++       ++|+|
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~-------~~d~V   72 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVN--HPRMHFFEGDITINKEWIEYHVK-------KCDVI   72 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhcc--CCCeEEEeCCCCCCHHHHHHHHc-------CCCEE
Confidence            47999999999999999999987 6999999886543322211  235889999998 6666555443       68999


Q ss_pred             EeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccC----------------
Q 024145           94 YNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAG----------------  157 (272)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~----------------  157 (272)
                      ||+|+...+  ..    ..++.+..+++|+.++.++++++..    .+ .++|++||.......                
T Consensus        73 iH~aa~~~~--~~----~~~~p~~~~~~n~~~~~~ll~aa~~----~~-~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~  141 (347)
T PRK11908         73 LPLVAIATP--AT----YVKQPLRVFELDFEANLPIVRSAVK----YG-KHLVFPSTSEVYGMCPDEEFDPEASPLVYGP  141 (347)
T ss_pred             EECcccCCh--HH----hhcCcHHHHHHHHHHHHHHHHHHHh----cC-CeEEEEecceeeccCCCcCcCccccccccCc
Confidence            999997543  11    1233457789999999999888764    23 479999997432110                


Q ss_pred             --CCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCC----CCh----hHHHHHHhhc-------CC
Q 024145          158 --LGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGG----VDP----ALIESSMSQM-------GN  220 (272)
Q Consensus       158 --~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~----~~~----~~~~~~~~~~-------~~  220 (272)
                        .....|+.||.+.+.+++.++.+   .|+.+..++|+.+..|......    ...    ..+.+.....       ..
T Consensus       142 ~~~p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~  218 (347)
T PRK11908        142 INKPRWIYACSKQLMDRVIWAYGME---EGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGS  218 (347)
T ss_pred             CCCccchHHHHHHHHHHHHHHHHHH---cCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCc
Confidence              01226999999999999988766   5788999999998887642100    011    1111221111       01


Q ss_pred             CCCCCCChHhHHHHHHHHhcCCCCCccccEEEecCc
Q 024145          221 LKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGG  256 (272)
Q Consensus       221 ~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG  256 (272)
                      ..+.++..+|++++++.++........|+.|++.++
T Consensus       219 ~~r~~i~v~D~a~a~~~~~~~~~~~~~g~~yni~~~  254 (347)
T PRK11908        219 QKRAFTDIDDGIDALMKIIENKDGVASGKIYNIGNP  254 (347)
T ss_pred             eeeccccHHHHHHHHHHHHhCccccCCCCeEEeCCC
Confidence            124689999999999988865432245889999875

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.78  E-value=2.2e-17  Score=148.33  Aligned_cols=231  Identities=17%  Similarity=0.164  Sum_probs=179.4

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHHHHHHHhC-----CceEEEEecCCCHHHHHHHHHHHH
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGEDLADKLG-----QDVCYIHCDISNEDEVINLVDTAV   84 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~   84 (272)
                      ..++||++|||||+|.||+.+++++++.+. ++++.+|++...-....++.     .++.++-+|+.|.+.++.++... 
T Consensus       246 ~~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~-  324 (588)
T COG1086         246 AMLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGH-  324 (588)
T ss_pred             hHcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcC-
Confidence            447999999999999999999999999985 58889998877665555552     46889999999999998887744 


Q ss_pred             HHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhh
Q 024145           85 SKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYT  164 (272)
Q Consensus        85 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~  164 (272)
                          ++|+++|.|+.-+.+      .-+..+.+.+++|+.|+.++++++...-.+    ++|.+|+--+..   +...|+
T Consensus       325 ----kvd~VfHAAA~KHVP------l~E~nP~Eai~tNV~GT~nv~~aa~~~~V~----~~V~iSTDKAV~---PtNvmG  387 (588)
T COG1086         325 ----KVDIVFHAAALKHVP------LVEYNPEEAIKTNVLGTENVAEAAIKNGVK----KFVLISTDKAVN---PTNVMG  387 (588)
T ss_pred             ----CCceEEEhhhhccCc------chhcCHHHHHHHhhHhHHHHHHHHHHhCCC----EEEEEecCcccC---CchHhh
Confidence                699999999976542      224456788999999999999999886555    499999866555   446899


Q ss_pred             hhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCC-------CCCCCChHhHHHHHHH
Q 024145          165 ISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNL-------KGEFLKTDGIANAALY  237 (272)
Q Consensus       165 ~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~dva~~~~~  237 (272)
                      +||...|.++.+++.+....+.++.+++=|.|-.-.-.   .-|-+.+...+. .|.       .+.|++.+|.++.++.
T Consensus       388 aTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrGS---ViPlFk~QI~~G-gplTvTdp~mtRyfMTI~EAv~LVlq  463 (588)
T COG1086         388 ATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRGS---VIPLFKKQIAEG-GPLTVTDPDMTRFFMTIPEAVQLVLQ  463 (588)
T ss_pred             HHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCCCC---CHHHHHHHHHcC-CCccccCCCceeEEEEHHHHHHHHHH
Confidence            99999999999999987766789999999988653322   333333333332 332       3678999999999998


Q ss_pred             HhcCCCCCccccEEEecCceeeccCcccc
Q 024145          238 LASDESSYVSGQNLVVDGGFSVVNPTVMR  266 (272)
Q Consensus       238 l~s~~~~~~~G~~i~~dgG~~~~~~~~~~  266 (272)
                      .....   -.|+++.+|=|..+-...+++
T Consensus       464 A~a~~---~gGeifvldMGepvkI~dLAk  489 (588)
T COG1086         464 AGAIA---KGGEIFVLDMGEPVKIIDLAK  489 (588)
T ss_pred             HHhhc---CCCcEEEEcCCCCeEHHHHHH
Confidence            77543   379999999998875555443

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.78  E-value=4.5e-17  Score=145.20  Aligned_cols=225  Identities=15%  Similarity=0.139  Sum_probs=153.9

Q ss_pred             cCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145            9 PFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      .+.. ++|++|||||+|.||+++++.|.++|++|++++|.....   .........++.+|+++.+++.+++.       
T Consensus        16 ~~~~-~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~---~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   84 (370)
T PLN02695         16 YWPS-EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEH---MSEDMFCHEFHLVDLRVMENCLKVTK-------   84 (370)
T ss_pred             CCCC-CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccc---cccccccceEEECCCCCHHHHHHHHh-------
Confidence            3444 778999999999999999999999999999999864321   11111135678899999888766554       


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccc-------------
Q 024145           89 KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEI-------------  155 (272)
Q Consensus        89 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~-------------  155 (272)
                      ++|+|||.|+....  .....   ......++.|+.++.++++++...    +-.++|++||...+.             
T Consensus        85 ~~D~Vih~Aa~~~~--~~~~~---~~~~~~~~~N~~~t~nll~aa~~~----~vk~~V~~SS~~vYg~~~~~~~~~~~~E  155 (370)
T PLN02695         85 GVDHVFNLAADMGG--MGFIQ---SNHSVIMYNNTMISFNMLEAARIN----GVKRFFYASSACIYPEFKQLETNVSLKE  155 (370)
T ss_pred             CCCEEEEcccccCC--ccccc---cCchhhHHHHHHHHHHHHHHHHHh----CCCEEEEeCchhhcCCccccCcCCCcCc
Confidence            58999999986432  11111   122345678999999999987542    345799999864211             


Q ss_pred             ----cCCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCC---C-ChhHHHHHHhhcCC-------
Q 024145          156 ----AGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGG---V-DPALIESSMSQMGN-------  220 (272)
Q Consensus       156 ----~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~---~-~~~~~~~~~~~~~~-------  220 (272)
                          +......|+.+|.+.+.+++.++..   .|+.+..++|+.+..|......   . .............+       
T Consensus       156 ~~~~p~~p~s~Yg~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g  232 (370)
T PLN02695        156 SDAWPAEPQDAYGLEKLATEELCKHYTKD---FGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDG  232 (370)
T ss_pred             ccCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCC
Confidence                1223458999999999999988776   5899999999999998542111   0 11222222221111       


Q ss_pred             -CCCCCCChHhHHHHHHHHhcCCCCCccccEEEecCceeec
Q 024145          221 -LKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       221 -~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~  260 (272)
                       ....+...+|++++++.++...    .++.+++.+|..++
T Consensus       233 ~~~r~~i~v~D~a~ai~~~~~~~----~~~~~nv~~~~~~s  269 (370)
T PLN02695        233 KQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMVS  269 (370)
T ss_pred             CeEEeEEeHHHHHHHHHHHHhcc----CCCceEecCCCcee
Confidence             1245788999999999876542    25778888876654

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.77  E-value=3.1e-17  Score=156.37  Aligned_cols=221  Identities=14%  Similarity=0.085  Sum_probs=152.9

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHc-CCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHH-HHHHHHHHHHHhCCcc
Q 024145           14 EGKVAIITGGASGIGAMAVELFHEN-GAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDE-VINLVDTAVSKFGKLD   91 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~~g~id   91 (272)
                      +++++|||||+|+||++++++|+++ |++|++++|..........  ..++.++.+|++|.++ ++++++       ++|
T Consensus       314 ~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~~--~~~~~~~~gDl~d~~~~l~~~l~-------~~D  384 (660)
T PRK08125        314 RRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFLG--HPRFHFVEGDISIHSEWIEYHIK-------KCD  384 (660)
T ss_pred             cCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhcC--CCceEEEeccccCcHHHHHHHhc-------CCC
Confidence            5689999999999999999999986 7999999987653322211  2368889999998665 333332       689


Q ss_pred             EEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccccccc-----C---------
Q 024145           92 IMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIA-----G---------  157 (272)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~-----~---------  157 (272)
                      +|||.|+...+  ...    .+.....+++|+.++..+++++...    + .++|++||...+..     .         
T Consensus       385 ~ViHlAa~~~~--~~~----~~~~~~~~~~Nv~~t~~ll~a~~~~----~-~~~V~~SS~~vyg~~~~~~~~E~~~~~~~  453 (660)
T PRK08125        385 VVLPLVAIATP--IEY----TRNPLRVFELDFEENLKIIRYCVKY----N-KRIIFPSTSEVYGMCTDKYFDEDTSNLIV  453 (660)
T ss_pred             EEEECccccCc--hhh----ccCHHHHHHhhHHHHHHHHHHHHhc----C-CeEEEEcchhhcCCCCCCCcCcccccccc
Confidence            99999997543  111    1223457899999999999988753    2 47999999643210     0         


Q ss_pred             -C---CCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCC--------CCChhHHHHHHhhcC------
Q 024145          158 -L---GSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKG--------GVDPALIESSMSQMG------  219 (272)
Q Consensus       158 -~---~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~--------~~~~~~~~~~~~~~~------  219 (272)
                       +   ....|+.||.+.+.+++.++.+   +|+++..++|+.+..|.....        ...+..+........      
T Consensus       454 ~p~~~p~s~Yg~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~  530 (660)
T PRK08125        454 GPINKQRWIYSVSKQLLDRVIWAYGEK---EGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDG  530 (660)
T ss_pred             CCCCCCccchHHHHHHHHHHHHHHHHh---cCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCC
Confidence             1   1236999999999999998777   579999999999998864210        001112222211110      


Q ss_pred             -CCCCCCCChHhHHHHHHHHhcCCCCCccccEEEecCce
Q 024145          220 -NLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGF  257 (272)
Q Consensus       220 -~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~  257 (272)
                       ...+.+...+|++++++.++........|+.|++.+|.
T Consensus       531 g~~~rd~i~v~Dva~a~~~~l~~~~~~~~g~iyni~~~~  569 (660)
T PRK08125        531 GKQKRCFTDIRDGIEALFRIIENKDNRCDGQIINIGNPD  569 (660)
T ss_pred             CceeeceeeHHHHHHHHHHHHhccccccCCeEEEcCCCC
Confidence             11245788999999998887653333468899998874

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.77  E-value=5e-17  Score=155.48  Aligned_cols=228  Identities=18%  Similarity=0.126  Sum_probs=156.4

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHc--CCeEEEeecCc--chHHHHHHH-hCCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHEN--GAKVVIADVQD--KLGEDLADK-LGQDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~--G~~V~~~~r~~--~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      .++|++|||||+|+||++++++|+++  |++|+.++|..  .....+... ...++.++.+|++|.+.++.++..     
T Consensus         4 ~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~-----   78 (668)
T PLN02260          4 YEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLIT-----   78 (668)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhh-----
Confidence            46789999999999999999999998  67898888743  122222111 124688999999999887665432     


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccccccc-----------
Q 024145           88 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIA-----------  156 (272)
Q Consensus        88 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~-----------  156 (272)
                      .++|+|||+|+....      +.+.++..+.+++|+.++..+++++...-   .-.++|++||......           
T Consensus        79 ~~~D~ViHlAa~~~~------~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~---~vkr~I~~SS~~vyg~~~~~~~~~~~E  149 (668)
T PLN02260         79 EGIDTIMHFAAQTHV------DNSFGNSFEFTKNNIYGTHVLLEACKVTG---QIRRFIHVSTDEVYGETDEDADVGNHE  149 (668)
T ss_pred             cCCCEEEECCCccCc------hhhhhCHHHHHHHHHHHHHHHHHHHHhcC---CCcEEEEEcchHHhCCCccccccCccc
Confidence            279999999997543      11223345678999999999998875421   2358999999643211           


Q ss_pred             ---CCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhc-C------CCCCCCC
Q 024145          157 ---GLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQM-G------NLKGEFL  226 (272)
Q Consensus       157 ---~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~-~------~~~~~~~  226 (272)
                         ......|+.+|.+.+.+++.++.+   .++.+.+++|+.+..|........+.......... .      .....+.
T Consensus       150 ~~~~~p~~~Y~~sK~~aE~~v~~~~~~---~~l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~g~g~~~r~~i  226 (668)
T PLN02260        150 ASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNVRSYL  226 (668)
T ss_pred             cCCCCCCCCcHHHHHHHHHHHHHHHHH---cCCCEEEECcccccCcCCCcccHHHHHHHHHhCCCCeEEecCCCceEeeE
Confidence               112357999999999999988777   47899999999999876432111111222222111 0      1113568


Q ss_pred             ChHhHHHHHHHHhcCCCCCccccEEEecCceeec
Q 024145          227 KTDGIANAALYLASDESSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       227 ~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~  260 (272)
                      ..+|+++++..++...   ..|++|++.++..+.
T Consensus       227 hV~Dva~a~~~~l~~~---~~~~vyni~~~~~~s  257 (668)
T PLN02260        227 YCEDVAEAFEVVLHKG---EVGHVYNIGTKKERR  257 (668)
T ss_pred             EHHHHHHHHHHHHhcC---CCCCEEEECCCCeeE
Confidence            8999999998877542   247889998876654

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.77  E-value=2.2e-17  Score=143.62  Aligned_cols=216  Identities=15%  Similarity=0.153  Sum_probs=144.7

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHH--HhCCccEEEe
Q 024145           18 AIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVS--KFGKLDIMYN   95 (272)
Q Consensus        18 vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~--~~g~id~lv~   95 (272)
                      +|||||+|+||++++++|+++|++++++.|+.......       ..+..+|+.|..+.+.+++.+.+  .++++|+|||
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~-------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~Vih   74 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-------VNLVDLDIADYMDKEDFLAQIMAGDDFGDIEAIFH   74 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH-------HhhhhhhhhhhhhHHHHHHHHhcccccCCccEEEE
Confidence            79999999999999999999999766665544322111       11244677777666666655442  2357999999


Q ss_pred             CCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccccccc-----------CCCCchhh
Q 024145           96 NAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIA-----------GLGSPAYT  164 (272)
Q Consensus        96 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~-----------~~~~~~Y~  164 (272)
                      +||....  .   ...   ....++.|+.++..+++++...    + .++|++||......           ......|+
T Consensus        75 ~A~~~~~--~---~~~---~~~~~~~n~~~t~~ll~~~~~~----~-~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~  141 (308)
T PRK11150         75 EGACSST--T---EWD---GKYMMDNNYQYSKELLHYCLER----E-IPFLYASSAATYGGRTDDFIEEREYEKPLNVYG  141 (308)
T ss_pred             CceecCC--c---CCC---hHHHHHHHHHHHHHHHHHHHHc----C-CcEEEEcchHHhCcCCCCCCccCCCCCCCCHHH
Confidence            9986432  1   111   1346899999999999988652    2 36999999753221           11235799


Q ss_pred             hhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChh----HHHHHHhhcCC--------CCCCCCChHhHH
Q 024145          165 ISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPA----LIESSMSQMGN--------LKGEFLKTDGIA  232 (272)
Q Consensus       165 ~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~----~~~~~~~~~~~--------~~~~~~~~~dva  232 (272)
                      .||.+.+.+++.++.+   .++.+..++|+.+..|..........    ......+...+        ..+.+...+|++
T Consensus       142 ~sK~~~E~~~~~~~~~---~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a  218 (308)
T PRK11150        142 YSKFLFDEYVRQILPE---ANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVA  218 (308)
T ss_pred             HHHHHHHHHHHHHHHH---cCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHH
Confidence            9999999999888766   47999999999999886532111111    11122211111        113568999999


Q ss_pred             HHHHHHhcCCCCCccccEEEecCceeec
Q 024145          233 NAALYLASDESSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       233 ~~~~~l~s~~~~~~~G~~i~~dgG~~~~  260 (272)
                      ++++.++...    .+.++++.+|..++
T Consensus       219 ~a~~~~~~~~----~~~~yni~~~~~~s  242 (308)
T PRK11150        219 AVNLWFWENG----VSGIFNCGTGRAES  242 (308)
T ss_pred             HHHHHHHhcC----CCCeEEcCCCCcee
Confidence            9998887543    24589998887554

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.76  E-value=1.3e-16  Score=138.60  Aligned_cols=214  Identities=21%  Similarity=0.243  Sum_probs=151.7

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCc-cEEEe
Q 024145           17 VAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKL-DIMYN   95 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i-d~lv~   95 (272)
                      .+|||||+|+||++++++|.++|++|+.++|.........    ..+.++.+|+++.+.++++..       .. |.+||
T Consensus         2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~d~~~~~~~~~~~~-------~~~d~vih   70 (314)
T COG0451           2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL----SGVEFVVLDLTDRDLVDELAK-------GVPDAVIH   70 (314)
T ss_pred             eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc----cccceeeecccchHHHHHHHh-------cCCCEEEE
Confidence            3999999999999999999999999999998766543222    467889999999866555444       33 99999


Q ss_pred             CCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccC-----------CCCc--h
Q 024145           96 NAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAG-----------LGSP--A  162 (272)
Q Consensus        96 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~-----------~~~~--~  162 (272)
                      +|+......   ... . .....+.+|+.++.++++++..    .+..++|+.||.....+.           +..+  .
T Consensus        71 ~aa~~~~~~---~~~-~-~~~~~~~~nv~gt~~ll~aa~~----~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~~  141 (314)
T COG0451          71 LAAQSSVPD---SNA-S-DPAEFLDVNVDGTLNLLEAARA----AGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNP  141 (314)
T ss_pred             ccccCchhh---hhh-h-CHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEeCCCceECCCCCCCCcccccCCCCCCCH
Confidence            999765410   111 1 4556899999999999998876    355679996664433321           1112  4


Q ss_pred             hhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCC---CChhHHHHHHhhcC-CCC-------CCCCChHhH
Q 024145          163 YTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGG---VDPALIESSMSQMG-NLK-------GEFLKTDGI  231 (272)
Q Consensus       163 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~---~~~~~~~~~~~~~~-~~~-------~~~~~~~dv  231 (272)
                      |+.||.+.|.+++.++.   ..|+.+.++.|+.+..|......   .............. ...       ..+...+|+
T Consensus       142 Yg~sK~~~E~~~~~~~~---~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  218 (314)
T COG0451         142 YGVSKLAAEQLLRAYAR---LYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDV  218 (314)
T ss_pred             HHHHHHHHHHHHHHHHH---HhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHH
Confidence            99999999999999998   36899999999999988766431   11111111222221 111       236779999


Q ss_pred             HHHHHHHhcCCCCCccccEEEecCce
Q 024145          232 ANAALYLASDESSYVSGQNLVVDGGF  257 (272)
Q Consensus       232 a~~~~~l~s~~~~~~~G~~i~~dgG~  257 (272)
                      +++++.++.....   + .+++.++.
T Consensus       219 a~~~~~~~~~~~~---~-~~ni~~~~  240 (314)
T COG0451         219 ADALLLALENPDG---G-VFNIGSGT  240 (314)
T ss_pred             HHHHHHHHhCCCC---c-EEEeCCCC
Confidence            9999999876543   3 88888875

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.75  E-value=7.2e-18  Score=142.51  Aligned_cols=224  Identities=17%  Similarity=0.197  Sum_probs=154.1

Q ss_pred             EEEeCCCChHHHHHHHHHHHcC-CeEEEeecCcchHHHHHHHh----C-CceE----EEEecCCCHHHHHHHHHHHHHHh
Q 024145           18 AIITGGASGIGAMAVELFHENG-AKVVIADVQDKLGEDLADKL----G-QDVC----YIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        18 vlItGas~giG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~~----~-~~~~----~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      +|||||+|.||+.++++|++.+ .++++++|++..+-.+.+++    + .++.    .+.+|+.|.+.++.++++.    
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~----   76 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEY----   76 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT------
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhc----
Confidence            6999999999999999999998 47999999998877777666    2 2343    4578999999988777654    


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhH
Q 024145           88 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISK  167 (272)
Q Consensus        88 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK  167 (272)
                       ++|++||.|+.-+.+   +.+   +...+.+++|+.|+.++++++..+-.    .++|++|+--+..   +...|++||
T Consensus        77 -~pdiVfHaAA~KhVp---l~E---~~p~eav~tNv~GT~nv~~aa~~~~v----~~~v~ISTDKAv~---PtnvmGatK  142 (293)
T PF02719_consen   77 -KPDIVFHAAALKHVP---LME---DNPFEAVKTNVLGTQNVAEAAIEHGV----ERFVFISTDKAVN---PTNVMGATK  142 (293)
T ss_dssp             -T-SEEEE------HH---HHC---CCHHHHHHHHCHHHHHHHHHHHHTT-----SEEEEEEECGCSS-----SHHHHHH
T ss_pred             -CCCEEEEChhcCCCC---hHH---hCHHHHHHHHHHHHHHHHHHHHHcCC----CEEEEccccccCC---CCcHHHHHH
Confidence             799999999976542   222   24567899999999999999988543    4699999976544   457899999


Q ss_pred             HHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCC-------CCCCCChHhHHHHHHHHhc
Q 024145          168 YGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNL-------KGEFLKTDGIANAALYLAS  240 (272)
Q Consensus       168 ~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~dva~~~~~l~s  240 (272)
                      ...|.++.+++......+.++.+++=|.|-.-.-   ...+-+.....+. .|+       .+.|++++|.++.++..+.
T Consensus       143 rlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~G---SVip~F~~Qi~~g-~PlTvT~p~mtRffmti~EAv~Lvl~a~~  218 (293)
T PF02719_consen  143 RLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRG---SVIPLFKKQIKNG-GPLTVTDPDMTRFFMTIEEAVQLVLQAAA  218 (293)
T ss_dssp             HHHHHHHHHHCCTSSSS--EEEEEEE-EETTGTT---SCHHHHHHHHHTT-SSEEECETT-EEEEE-HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhhCCCCCcEEEEEEecceecCCC---cHHHHHHHHHHcC-CcceeCCCCcEEEEecHHHHHHHHHHHHh
Confidence            9999999999998877789999999998864221   1333343333332 332       2668999999999998775


Q ss_pred             CCCCCccccEEEecCceeeccCcccc
Q 024145          241 DESSYVSGQNLVVDGGFSVVNPTVMR  266 (272)
Q Consensus       241 ~~~~~~~G~~i~~dgG~~~~~~~~~~  266 (272)
                      -..   .|+++..|=|..+..-.+++
T Consensus       219 ~~~---~geifvl~mg~~v~I~dlA~  241 (293)
T PF02719_consen  219 LAK---GGEIFVLDMGEPVKILDLAE  241 (293)
T ss_dssp             H-----TTEEEEE---TCEECCCHHH
T ss_pred             hCC---CCcEEEecCCCCcCHHHHHH
Confidence            432   68999999988887666554

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.74  E-value=1.4e-16  Score=144.84  Aligned_cols=217  Identities=15%  Similarity=0.115  Sum_probs=147.9

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchH-HHHHHHh-CCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLG-EDLADKL-GQDVCYIHCDISNEDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~-~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   91 (272)
                      +++++|||||+|+||++++++|+++|++|++++|..... +...... ..++.++..|+.++.     +       ..+|
T Consensus       118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~~~~~~~~i~~D~~~~~-----l-------~~~D  185 (442)
T PLN02206        118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVEPI-----L-------LEVD  185 (442)
T ss_pred             CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhccCCceEEEECCccChh-----h-------cCCC
Confidence            678999999999999999999999999999888653321 1121112 245788888987652     1       1589


Q ss_pred             EEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccccccc---------------
Q 024145           92 IMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIA---------------  156 (272)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~---------------  156 (272)
                      +|||.|+...+  ..    ...+....+++|+.++.++++++...    + .++|++||...+..               
T Consensus       186 ~ViHlAa~~~~--~~----~~~~p~~~~~~Nv~gt~nLleaa~~~----g-~r~V~~SS~~VYg~~~~~p~~E~~~~~~~  254 (442)
T PLN02206        186 QIYHLACPASP--VH----YKFNPVKTIKTNVVGTLNMLGLAKRV----G-ARFLLTSTSEVYGDPLQHPQVETYWGNVN  254 (442)
T ss_pred             EEEEeeeecch--hh----hhcCHHHHHHHHHHHHHHHHHHHHHh----C-CEEEEECChHHhCCCCCCCCCccccccCC
Confidence            99999986543  11    11234578899999999999988653    2 37999999754321               


Q ss_pred             -CCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCC--CChhHHHHHHhhcC-CC------CCCCC
Q 024145          157 -GLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGG--VDPALIESSMSQMG-NL------KGEFL  226 (272)
Q Consensus       157 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~--~~~~~~~~~~~~~~-~~------~~~~~  226 (272)
                       ......|+.||.+.|.+++.+.+.   .|+.+..+.|+.+..|......  .....+........ ..      .+.++
T Consensus       255 P~~~~s~Y~~SK~~aE~~~~~y~~~---~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi  331 (442)
T PLN02206        255 PIGVRSCYDEGKRTAETLTMDYHRG---ANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQ  331 (442)
T ss_pred             CCCccchHHHHHHHHHHHHHHHHHH---hCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeEE
Confidence             112357999999999999888666   4799999999999887633110  11122222222111 11      13478


Q ss_pred             ChHhHHHHHHHHhcCCCCCccccEEEecCceeec
Q 024145          227 KTDGIANAALYLASDESSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       227 ~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~  260 (272)
                      ..+|++++++.++...    .+..|++.+|..+.
T Consensus       332 ~V~Dva~ai~~a~e~~----~~g~yNIgs~~~~s  361 (442)
T PLN02206        332 FVSDLVEGLMRLMEGE----HVGPFNLGNPGEFT  361 (442)
T ss_pred             eHHHHHHHHHHHHhcC----CCceEEEcCCCcee
Confidence            8999999999887543    23478888876554

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.73  E-value=1.8e-16  Score=137.56  Aligned_cols=207  Identities=19%  Similarity=0.174  Sum_probs=142.3

Q ss_pred             EEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCC
Q 024145           19 IITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAG   98 (272)
Q Consensus        19 lItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag   98 (272)
                      |||||+|+||+++++.|+++|++|+++.+.                 ..+|+++.++++++++..     ++|+|||+|+
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~-----------------~~~Dl~~~~~l~~~~~~~-----~~d~Vih~A~   58 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH-----------------KELDLTRQADVEAFFAKE-----KPTYVILAAA   58 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc-----------------ccCCCCCHHHHHHHHhcc-----CCCEEEEeee
Confidence            699999999999999999999987765432                 147999999988776652     6899999998


Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccC-------------C---CCch
Q 024145           99 ILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAG-------------L---GSPA  162 (272)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~-------------~---~~~~  162 (272)
                      .....     ....++....++.|+.++..+++++...    +-.++|++||.....+.             +   ....
T Consensus        59 ~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~~~----~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~  129 (306)
T PLN02725         59 KVGGI-----HANMTYPADFIRENLQIQTNVIDAAYRH----GVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTNEW  129 (306)
T ss_pred             eeccc-----chhhhCcHHHHHHHhHHHHHHHHHHHHc----CCCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCcch
Confidence            74320     0111233467889999999999988653    34579999986432210             1   1235


Q ss_pred             hhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCC----CCChhHHHHHH----hhc--------CCCCCCCC
Q 024145          163 YTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKG----GVDPALIESSM----SQM--------GNLKGEFL  226 (272)
Q Consensus       163 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~----~~~~~~~~~~~----~~~--------~~~~~~~~  226 (272)
                      |+.||.+.+.+++.+..+   .++++..+.|+.+..|.....    ...+..+....    ...        ......++
T Consensus       130 Y~~sK~~~e~~~~~~~~~---~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i  206 (306)
T PLN02725        130 YAIAKIAGIKMCQAYRIQ---YGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFL  206 (306)
T ss_pred             HHHHHHHHHHHHHHHHHH---hCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccc
Confidence            999999999999888766   478999999999998864211    01112222111    110        01124678


Q ss_pred             ChHhHHHHHHHHhcCCCCCccccEEEecCceeeccC
Q 024145          227 KTDGIANAALYLASDESSYVSGQNLVVDGGFSVVNP  262 (272)
Q Consensus       227 ~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~  262 (272)
                      .++|++++++.++....   .+..+++.+|..++.-
T Consensus       207 ~v~Dv~~~~~~~~~~~~---~~~~~ni~~~~~~s~~  239 (306)
T PLN02725        207 HVDDLADAVVFLMRRYS---GAEHVNVGSGDEVTIK  239 (306)
T ss_pred             cHHHHHHHHHHHHhccc---cCcceEeCCCCcccHH
Confidence            99999999998886532   3455688887765433

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.73  E-value=7.9e-16  Score=133.95  Aligned_cols=218  Identities=18%  Similarity=0.170  Sum_probs=145.2

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEeC
Q 024145           18 AIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNN   96 (272)
Q Consensus        18 vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~   96 (272)
                      +|||||+|+||++++++|.++|+ .|++++|..... .+. ....  ..+..|+.+.+.++.+.+.   .+.++|++||+
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~~-~~~~--~~~~~d~~~~~~~~~~~~~---~~~~~D~vvh~   73 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KFL-NLAD--LVIADYIDKEDFLDRLEKG---AFGKIEAIFHQ   73 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hhh-hhhh--eeeeccCcchhHHHHHHhh---ccCCCCEEEEC
Confidence            58999999999999999999998 688877654321 111 1111  3466788887776655442   34579999999


Q ss_pred             CCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccccccc-----------CCCCchhhh
Q 024145           97 AGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIA-----------GLGSPAYTI  165 (272)
Q Consensus        97 ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~-----------~~~~~~Y~~  165 (272)
                      |+....        +.++....+++|+.++..+++++...    + .++|++||......           ......|+.
T Consensus        74 A~~~~~--------~~~~~~~~~~~n~~~~~~ll~~~~~~----~-~~~v~~SS~~vy~~~~~~~~e~~~~~~p~~~Y~~  140 (314)
T TIGR02197        74 GACSDT--------TETDGEYMMENNYQYSKRLLDWCAEK----G-IPFIYASSAATYGDGEAGFREGRELERPLNVYGY  140 (314)
T ss_pred             ccccCc--------cccchHHHHHHHHHHHHHHHHHHHHh----C-CcEEEEccHHhcCCCCCCcccccCcCCCCCHHHH
Confidence            996422        12345678899999999999987652    2 36999999653221           114557999


Q ss_pred             hHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChh----HHHHHHhhcCC-------------CCCCCCCh
Q 024145          166 SKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPA----LIESSMSQMGN-------------LKGEFLKT  228 (272)
Q Consensus       166 sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~----~~~~~~~~~~~-------------~~~~~~~~  228 (272)
                      ||.+.+.+++.+..+. ..++.+..+.|+.+..|..........    ...........             ....+...
T Consensus       141 sK~~~e~~~~~~~~~~-~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v  219 (314)
T TIGR02197       141 SKFLFDQYVRRRVLPE-ALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYV  219 (314)
T ss_pred             HHHHHHHHHHHHhHhh-ccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEH
Confidence            9999999998754332 135788999999988876432111111    11111111100             11357889


Q ss_pred             HhHHHHHHHHhcCCCCCccccEEEecCceeec
Q 024145          229 DGIANAALYLASDESSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       229 ~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~  260 (272)
                      +|++++++.++.. .   .+..+++.++..++
T Consensus       220 ~D~a~~i~~~~~~-~---~~~~yni~~~~~~s  247 (314)
T TIGR02197       220 KDVVDVNLWLLEN-G---VSGIFNLGTGRARS  247 (314)
T ss_pred             HHHHHHHHHHHhc-c---cCceEEcCCCCCcc
Confidence            9999999988865 1   46689998876543

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.72  E-value=2.9e-16  Score=140.80  Aligned_cols=213  Identities=12%  Similarity=0.091  Sum_probs=145.5

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHH-----HHHHhCCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGED-----LADKLGQDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~-----~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      .++++++||||+|+||++++++|+++|++|++++|+....+.     .......++.++.+|++|+++++++++..   .
T Consensus        58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~---~  134 (390)
T PLN02657         58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSE---G  134 (390)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHh---C
Confidence            567899999999999999999999999999999997654321     01112346889999999999998877643   1


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhH
Q 024145           88 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISK  167 (272)
Q Consensus        88 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK  167 (272)
                      +++|+||||++....   .    .    ...+++|+.+...+++++..    .+-+++|++||.+...   ....|..+|
T Consensus       135 ~~~D~Vi~~aa~~~~---~----~----~~~~~vn~~~~~~ll~aa~~----~gv~r~V~iSS~~v~~---p~~~~~~sK  196 (390)
T PLN02657        135 DPVDVVVSCLASRTG---G----V----KDSWKIDYQATKNSLDAGRE----VGAKHFVLLSAICVQK---PLLEFQRAK  196 (390)
T ss_pred             CCCcEEEECCccCCC---C----C----ccchhhHHHHHHHHHHHHHH----cCCCEEEEEeeccccC---cchHHHHHH
Confidence            269999999874221   1    0    12356788888888887653    3456899999986543   344688899


Q ss_pred             HHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhc-------CCCC-CCCCChHhHHHHHHHHh
Q 024145          168 YGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQM-------GNLK-GEFLKTDGIANAALYLA  239 (272)
Q Consensus       168 ~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~-------~~~~-~~~~~~~dva~~~~~l~  239 (272)
                      ...+...+.     ...++....++|+.+..++..       .........       .... ..+.+.+|+|..+..++
T Consensus       197 ~~~E~~l~~-----~~~gl~~tIlRp~~~~~~~~~-------~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~  264 (390)
T PLN02657        197 LKFEAELQA-----LDSDFTYSIVRPTAFFKSLGG-------QVEIVKDGGPYVMFGDGKLCACKPISEADLASFIADCV  264 (390)
T ss_pred             HHHHHHHHh-----ccCCCCEEEEccHHHhcccHH-------HHHhhccCCceEEecCCcccccCceeHHHHHHHHHHHH
Confidence            988877654     236899999999877643321       111111110       0000 12467899999998887


Q ss_pred             cCCCCCccccEEEecC-ceeec
Q 024145          240 SDESSYVSGQNLVVDG-GFSVV  260 (272)
Q Consensus       240 s~~~~~~~G~~i~~dg-G~~~~  260 (272)
                      .+..  ..|+++++.| |..++
T Consensus       265 ~~~~--~~~~~~~Iggp~~~~S  284 (390)
T PLN02657        265 LDES--KINKVLPIGGPGKALT  284 (390)
T ss_pred             hCcc--ccCCEEEcCCCCcccC
Confidence            5433  2578999987 44443

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.72  E-value=1.7e-15  Score=130.28  Aligned_cols=199  Identities=17%  Similarity=0.115  Sum_probs=137.6

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEeC
Q 024145           17 VAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNN   96 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~   96 (272)
                      ++|||||+|+||++++++|.++|++|++++|.                  .+|+.+.++++++++..     ++|++||+
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~------------------~~d~~~~~~~~~~~~~~-----~~d~vi~~   57 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS------------------QLDLTDPEALERLLRAI-----RPDAVVNT   57 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc------------------ccCCCCHHHHHHHHHhC-----CCCEEEEC
Confidence            37999999999999999999999999998874                  46999999998877643     68999999


Q ss_pred             CCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccccccc-----------CCCCchhhh
Q 024145           97 AGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIA-----------GLGSPAYTI  165 (272)
Q Consensus        97 ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~-----------~~~~~~Y~~  165 (272)
                      ++....  .    .........+++|+.++..+++++...    + .++|++||.....+           ......|+.
T Consensus        58 a~~~~~--~----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~  126 (287)
T TIGR01214        58 AAYTDV--D----GAESDPEKAFAVNALAPQNLARAAARH----G-ARLVHISTDYVFDGEGKRPYREDDATNPLNVYGQ  126 (287)
T ss_pred             Cccccc--c----ccccCHHHHHHHHHHHHHHHHHHHHHc----C-CeEEEEeeeeeecCCCCCCCCCCCCCCCcchhhH
Confidence            986432  1    112335677899999999999987542    2 37999998653221           112457999


Q ss_pred             hHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhc-----CCCCCCCCChHhHHHHHHHHhc
Q 024145          166 SKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQM-----GNLKGEFLKTDGIANAALYLAS  240 (272)
Q Consensus       166 sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~dva~~~~~l~s  240 (272)
                      +|.+.|.+++.+       +..+..++|+.+.++..... .............     ......+...+|+++++..++.
T Consensus       127 ~K~~~E~~~~~~-------~~~~~ilR~~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~  198 (287)
T TIGR01214       127 SKLAGEQAIRAA-------GPNALIVRTSWLYGGGGGRN-FVRTMLRLAGRGEELRVVDDQIGSPTYAKDLARVIAALLQ  198 (287)
T ss_pred             HHHHHHHHHHHh-------CCCeEEEEeeecccCCCCCC-HHHHHHHHhhcCCCceEecCCCcCCcCHHHHHHHHHHHHh
Confidence            999999888765       35789999999988763210 0011111111110     0011345678999999998885


Q ss_pred             CCCCCccccEEEecCceee
Q 024145          241 DESSYVSGQNLVVDGGFSV  259 (272)
Q Consensus       241 ~~~~~~~G~~i~~dgG~~~  259 (272)
                      ...  ..++.+++.++..+
T Consensus       199 ~~~--~~~~~~ni~~~~~~  215 (287)
T TIGR01214       199 RLA--RARGVYHLANSGQC  215 (287)
T ss_pred             hcc--CCCCeEEEECCCCc
Confidence            431  13566777665544

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.72  E-value=3.6e-16  Score=136.61  Aligned_cols=206  Identities=13%  Similarity=0.060  Sum_probs=141.1

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEeC
Q 024145           17 VAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNN   96 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~   96 (272)
                      +++||||||.||++++++|+++|++|++++|+......+.   ...+.++.+|++|++++.++++       ++|++||+
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~---~~~v~~v~~Dl~d~~~l~~al~-------g~d~Vi~~   71 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLK---EWGAELVYGDLSLPETLPPSFK-------GVTAIIDA   71 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHh---hcCCEEEECCCCCHHHHHHHHC-------CCCEEEEC
Confidence            6999999999999999999999999999999865433222   1358899999999999877665       68999998


Q ss_pred             CCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHHHHHHHH
Q 024145           97 AGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKC  176 (272)
Q Consensus        97 ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~~~~  176 (272)
                      ++....           +.....++|+.++.++++++...    +-.++|++||..... . +...|..+|...+.+.+ 
T Consensus        72 ~~~~~~-----------~~~~~~~~~~~~~~~l~~aa~~~----gvkr~I~~Ss~~~~~-~-~~~~~~~~K~~~e~~l~-  133 (317)
T CHL00194         72 STSRPS-----------DLYNAKQIDWDGKLALIEAAKAA----KIKRFIFFSILNAEQ-Y-PYIPLMKLKSDIEQKLK-  133 (317)
T ss_pred             CCCCCC-----------CccchhhhhHHHHHHHHHHHHHc----CCCEEEEeccccccc-c-CCChHHHHHHHHHHHHH-
Confidence            753211           12235667888888888877653    334799998864321 1 23568889988777553 


Q ss_pred             HHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhc------CCCCCCCCChHhHHHHHHHHhcCCCCCccccE
Q 024145          177 LAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQM------GNLKGEFLKTDGIANAALYLASDESSYVSGQN  250 (272)
Q Consensus       177 la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~  250 (272)
                            ..|+....++|+.+...+...      .....+...      ......+.+.+|+|+++..++.....  .|++
T Consensus       134 ------~~~l~~tilRp~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~--~~~~  199 (317)
T CHL00194        134 ------KSGIPYTIFRLAGFFQGLISQ------YAIPILEKQPIWITNESTPISYIDTQDAAKFCLKSLSLPET--KNKT  199 (317)
T ss_pred             ------HcCCCeEEEeecHHhhhhhhh------hhhhhccCCceEecCCCCccCccCHHHHHHHHHHHhcCccc--cCcE
Confidence                  257889999998654332210      000000000      01113567789999999988864332  5899


Q ss_pred             EEecCceeeccCcc
Q 024145          251 LVVDGGFSVVNPTV  264 (272)
Q Consensus       251 i~~dgG~~~~~~~~  264 (272)
                      |++.|+..++...+
T Consensus       200 ~ni~g~~~~s~~el  213 (317)
T CHL00194        200 FPLVGPKSWNSSEI  213 (317)
T ss_pred             EEecCCCccCHHHH
Confidence            99999876654333

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.70  E-value=1.1e-15  Score=127.65  Aligned_cols=156  Identities=17%  Similarity=0.179  Sum_probs=121.7

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEe
Q 024145           16 KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYN   95 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~   95 (272)
                      +++|||||.|-||++.+.+|++.|++|++.++......+.....  ...+++.|+.|.+.+++++++-     ++|.|||
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~--~~~f~~gDi~D~~~L~~vf~~~-----~idaViH   73 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKL--QFKFYEGDLLDRALLTAVFEEN-----KIDAVVH   73 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhc--cCceEEeccccHHHHHHHHHhc-----CCCEEEE
Confidence            37999999999999999999999999999988665544443322  1689999999999988887764     7999999


Q ss_pred             CCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCC------------CCchh
Q 024145           96 NAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGL------------GSPAY  163 (272)
Q Consensus        96 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~------------~~~~Y  163 (272)
                      .||....      ..|.+...+.++.|+.+++.|++++..+-.++    +||-|| ++.++.|            ...+|
T Consensus        74 FAa~~~V------gESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~----~vFSSt-AavYG~p~~~PI~E~~~~~p~NPY  142 (329)
T COG1087          74 FAASISV------GESVQNPLKYYDNNVVGTLNLIEAMLQTGVKK----FIFSST-AAVYGEPTTSPISETSPLAPINPY  142 (329)
T ss_pred             Ccccccc------chhhhCHHHHHhhchHhHHHHHHHHHHhCCCE----EEEecc-hhhcCCCCCcccCCCCCCCCCCcc
Confidence            9996543      34567788899999999999999887765543    666555 4444332            34589


Q ss_pred             hhhHHHHHHHHHHHHHHhcCCCcEEEEEe
Q 024145          164 TISKYGILGLVKCLAAELGQYGIRVNCVS  192 (272)
Q Consensus       164 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~  192 (272)
                      +.||...|.+.+.++.-+   +.++.+++
T Consensus       143 G~sKlm~E~iL~d~~~a~---~~~~v~LR  168 (329)
T COG1087         143 GRSKLMSEEILRDAAKAN---PFKVVILR  168 (329)
T ss_pred             hhHHHHHHHHHHHHHHhC---CCcEEEEE
Confidence            999999999999999884   45555543

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.70  E-value=1.3e-15  Score=138.26  Aligned_cols=218  Identities=16%  Similarity=0.109  Sum_probs=147.9

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchH-HHHHHHh-CCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLG-EDLADKL-GQDVCYIHCDISNEDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~-~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   91 (272)
                      +.+++|||||+|+||++++++|+++|++|++++|..... ....... ..++.++..|+.+..     +       .++|
T Consensus       119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~Di~~~~-----~-------~~~D  186 (436)
T PLN02166        119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEPI-----L-------LEVD  186 (436)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhccCCceEEEECcccccc-----c-------cCCC
Confidence            446899999999999999999999999999998753321 1121111 135778888886642     1       2589


Q ss_pred             EEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccc----------------
Q 024145           92 IMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEI----------------  155 (272)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~----------------  155 (272)
                      +|||+|+.....  ..    ..+....+++|+.++..+++++...    + .++|++||...+.                
T Consensus       187 ~ViHlAa~~~~~--~~----~~~p~~~~~~Nv~gT~nLleaa~~~----g-~r~V~~SS~~VYg~~~~~p~~E~~~~~~~  255 (436)
T PLN02166        187 QIYHLACPASPV--HY----KYNPVKTIKTNVMGTLNMLGLAKRV----G-ARFLLTSTSEVYGDPLEHPQKETYWGNVN  255 (436)
T ss_pred             EEEECceeccch--hh----ccCHHHHHHHHHHHHHHHHHHHHHh----C-CEEEEECcHHHhCCCCCCCCCccccccCC
Confidence            999999865431  11    1234578899999999999988653    2 3799998875321                


Q ss_pred             cCCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCC--CChhHHHHHHhhcCC-------CCCCCC
Q 024145          156 AGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGG--VDPALIESSMSQMGN-------LKGEFL  226 (272)
Q Consensus       156 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~--~~~~~~~~~~~~~~~-------~~~~~~  226 (272)
                      +......|+.+|.+.|.+++.+.+.   .++.+..+.|+.+..|......  .....+.........       ..+.++
T Consensus       256 p~~p~s~Yg~SK~~aE~~~~~y~~~---~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi  332 (436)
T PLN02166        256 PIGERSCYDEGKRTAETLAMDYHRG---AGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQ  332 (436)
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHHH---hCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeE
Confidence            1112346999999999999988766   4799999999999988643110  111223333222111       114578


Q ss_pred             ChHhHHHHHHHHhcCCCCCccccEEEecCceeecc
Q 024145          227 KTDGIANAALYLASDESSYVSGQNLVVDGGFSVVN  261 (272)
Q Consensus       227 ~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~  261 (272)
                      ..+|+++++..++...    .+.+|++.+|..+..
T Consensus       333 ~V~Dva~ai~~~~~~~----~~giyNIgs~~~~Si  363 (436)
T PLN02166        333 YVSDLVDGLVALMEGE----HVGPFNLGNPGEFTM  363 (436)
T ss_pred             EHHHHHHHHHHHHhcC----CCceEEeCCCCcEeH
Confidence            8999999999887533    234888887765543

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.67  E-value=7.8e-15  Score=127.19  Aligned_cols=146  Identities=17%  Similarity=0.093  Sum_probs=109.5

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEeC
Q 024145           17 VAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNN   96 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~   96 (272)
                      ++|||||+|.||++++++|+++| +|+.++|...              .+..|++|.++++++++..     ++|+|||+
T Consensus         2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~--------------~~~~Dl~d~~~~~~~~~~~-----~~D~Vih~   61 (299)
T PRK09987          2 NILLFGKTGQVGWELQRALAPLG-NLIALDVHST--------------DYCGDFSNPEGVAETVRKI-----RPDVIVNA   61 (299)
T ss_pred             eEEEECCCCHHHHHHHHHhhccC-CEEEeccccc--------------cccCCCCCHHHHHHHHHhc-----CCCEEEEC
Confidence            69999999999999999999999 7888877532              2457999999988877743     68999999


Q ss_pred             CCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccccccc-----------CCCCchhhh
Q 024145           97 AGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIA-----------GLGSPAYTI  165 (272)
Q Consensus        97 ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~-----------~~~~~~Y~~  165 (272)
                      |+....      +...++....+++|+.++.++++++...     +.++|++||...+.+           ......|+.
T Consensus        62 Aa~~~~------~~~~~~~~~~~~~N~~~~~~l~~aa~~~-----g~~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~Yg~  130 (299)
T PRK09987         62 AAHTAV------DKAESEPEFAQLLNATSVEAIAKAANEV-----GAWVVHYSTDYVFPGTGDIPWQETDATAPLNVYGE  130 (299)
T ss_pred             CccCCc------chhhcCHHHHHHHHHHHHHHHHHHHHHc-----CCeEEEEccceEECCCCCCCcCCCCCCCCCCHHHH
Confidence            997543      1122334566789999999999988653     236999988643211           112347999


Q ss_pred             hHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCc
Q 024145          166 SKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGM  200 (272)
Q Consensus       166 sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~  200 (272)
                      ||.+.|.+++.+..       ....++|+++..|.
T Consensus       131 sK~~~E~~~~~~~~-------~~~ilR~~~vyGp~  158 (299)
T PRK09987        131 TKLAGEKALQEHCA-------KHLIFRTSWVYAGK  158 (299)
T ss_pred             HHHHHHHHHHHhCC-------CEEEEecceecCCC
Confidence            99999998876532       34888999998875

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.64  E-value=3e-14  Score=136.27  Aligned_cols=219  Identities=19%  Similarity=0.129  Sum_probs=143.3

Q ss_pred             EEEEeCCCChHHHHHHHHHH--HcCCeEEEeecCcch--HHHHHHHhC-CceEEEEecCCCHHHH--HHHHHHHHHHhCC
Q 024145           17 VAIITGGASGIGAMAVELFH--ENGAKVVIADVQDKL--GEDLADKLG-QDVCYIHCDISNEDEV--INLVDTAVSKFGK   89 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la--~~G~~V~~~~r~~~~--~~~~~~~~~-~~~~~~~~D~~~~~~~--~~~~~~~~~~~g~   89 (272)
                      ++|||||+|+||++++++|+  ++|++|++++|+...  .+.+....+ .++.++.+|++|++..  ...++++    .+
T Consensus         2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l----~~   77 (657)
T PRK07201          2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL----GD   77 (657)
T ss_pred             eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh----cC
Confidence            69999999999999999999  579999999996532  222222222 4688999999985310  1111222    37


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccC------------
Q 024145           90 LDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAG------------  157 (272)
Q Consensus        90 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~------------  157 (272)
                      +|++||+||.....      .   ......++|+.++..+++.+..    .+..++|++||.......            
T Consensus        78 ~D~Vih~Aa~~~~~------~---~~~~~~~~nv~gt~~ll~~a~~----~~~~~~v~~SS~~v~g~~~~~~~e~~~~~~  144 (657)
T PRK07201         78 IDHVVHLAAIYDLT------A---DEEAQRAANVDGTRNVVELAER----LQAATFHHVSSIAVAGDYEGVFREDDFDEG  144 (657)
T ss_pred             CCEEEECceeecCC------C---CHHHHHHHHhHHHHHHHHHHHh----cCCCeEEEEeccccccCccCccccccchhh
Confidence            99999999965321      1   1245678899999998887754    234679999987543211            


Q ss_pred             -CCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCC---ChhHHHHHHh---hcC---CC------
Q 024145          158 -LGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGV---DPALIESSMS---QMG---NL------  221 (272)
Q Consensus       158 -~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~---~~~~~~~~~~---~~~---~~------  221 (272)
                       .....|+.||...|.+++.      ..|+.+..++|+.+.++.......   ........+.   ...   +.      
T Consensus       145 ~~~~~~Y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (657)
T PRK07201        145 QGLPTPYHRTKFEAEKLVRE------ECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGG  218 (657)
T ss_pred             cCCCCchHHHHHHHHHHHHH------cCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCC
Confidence             1224699999999998753      247999999999998764321000   0111111111   110   00      


Q ss_pred             CCCCCChHhHHHHHHHHhcCCCCCccccEEEecCceeec
Q 024145          222 KGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       222 ~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~  260 (272)
                      ...+...+|+++++..++..+  ..+|+.|++.++..+.
T Consensus       219 ~~~~v~vddva~ai~~~~~~~--~~~g~~~ni~~~~~~s  255 (657)
T PRK07201        219 RTNIVPVDYVADALDHLMHKD--GRDGQTFHLTDPKPQR  255 (657)
T ss_pred             eeeeeeHHHHHHHHHHHhcCc--CCCCCEEEeCCCCCCc
Confidence            023567899999999887643  2478999998876554

>PLN02996 fatty acyl-CoA reductase

Probab=99.64  E-value=1.4e-14  Score=133.44  Aligned_cols=220  Identities=15%  Similarity=0.092  Sum_probs=144.5

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCC---eEEEeecCcch--HH-----HHH---------HHh--------CCceEE
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGA---KVVIADVQDKL--GE-----DLA---------DKL--------GQDVCY   65 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~---~V~~~~r~~~~--~~-----~~~---------~~~--------~~~~~~   65 (272)
                      ++||+++||||||+||+.+++.|++.+-   +|++..|....  .+     ++.         +..        ..++.+
T Consensus         9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~   88 (491)
T PLN02996          9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP   88 (491)
T ss_pred             hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence            6899999999999999999999998642   57777775431  11     110         001        147899


Q ss_pred             EEecCCC-------HHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhc
Q 024145           66 IHCDISN-------EDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMV  138 (272)
Q Consensus        66 ~~~D~~~-------~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~  138 (272)
                      +..|+++       .+.++.+++       .+|+|||+|+....     .    +..+..+++|+.++..+++.+...- 
T Consensus        89 i~GDl~~~~LGLs~~~~~~~l~~-------~vD~ViH~AA~v~~-----~----~~~~~~~~~Nv~gt~~ll~~a~~~~-  151 (491)
T PLN02996         89 VPGDISYDDLGVKDSNLREEMWK-------EIDIVVNLAATTNF-----D----ERYDVALGINTLGALNVLNFAKKCV-  151 (491)
T ss_pred             EecccCCcCCCCChHHHHHHHHh-------CCCEEEECccccCC-----c----CCHHHHHHHHHHHHHHHHHHHHhcC-
Confidence            9999984       343444443       68999999997532     1    2457789999999999999876521 


Q ss_pred             CCCCceEEEEeccccccc---------CC---------------------------------------------------
Q 024145          139 PQQKGCILFTASACTEIA---------GL---------------------------------------------------  158 (272)
Q Consensus       139 ~~~~g~iv~iss~~~~~~---------~~---------------------------------------------------  158 (272)
                        +-.++|++||......         ++                                                   
T Consensus       152 --~~k~~V~vST~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (491)
T PLN02996        152 --KVKMLLHVSTAYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKL  229 (491)
T ss_pred             --CCCeEEEEeeeEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHh
Confidence              2247999988754311         00                                                   


Q ss_pred             --CCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCC------ChhHH-HHHHhhcC-------CCC
Q 024145          159 --GSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGV------DPALI-ESSMSQMG-------NLK  222 (272)
Q Consensus       159 --~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~------~~~~~-~~~~~~~~-------~~~  222 (272)
                        ....|+.||++.|.+++..+     .++.+..++|+.+.++.......      ....+ ........       ...
T Consensus       230 ~~~pn~Y~~TK~~aE~lv~~~~-----~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~  304 (491)
T PLN02996        230 HGWPNTYVFTKAMGEMLLGNFK-----ENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSV  304 (491)
T ss_pred             CCCCCchHhhHHHHHHHHHHhc-----CCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCee
Confidence              11359999999999997542     37999999999998876432100      00111 10111111       112


Q ss_pred             CCCCChHhHHHHHHHHhcCCC-CCccccEEEecCc
Q 024145          223 GEFLKTDGIANAALYLASDES-SYVSGQNLVVDGG  256 (272)
Q Consensus       223 ~~~~~~~dva~~~~~l~s~~~-~~~~G~~i~~dgG  256 (272)
                      ..+..++|++++++.++.... ..-.++++++..|
T Consensus       305 ~D~v~Vddvv~a~l~a~~~~~~~~~~~~vYNi~s~  339 (491)
T PLN02996        305 LDVIPADMVVNAMIVAMAAHAGGQGSEIIYHVGSS  339 (491)
T ss_pred             cceecccHHHHHHHHHHHHhhccCCCCcEEEecCC
Confidence            567889999999888765421 1124678999877

>PRK05865 hypothetical protein; Provisional

Probab=99.63  E-value=2.4e-14  Score=137.54  Aligned_cols=183  Identities=15%  Similarity=0.111  Sum_probs=132.4

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEeC
Q 024145           17 VAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNN   96 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~   96 (272)
                      +++||||+|+||++++++|+++|++|++++|+....      ....+.++.+|++|.++++++++       .+|++||+
T Consensus         2 kILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~------~~~~v~~v~gDL~D~~~l~~al~-------~vD~VVHl   68 (854)
T PRK05865          2 RIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS------WPSSADFIAADIRDATAVESAMT-------GADVVAHC   68 (854)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh------cccCceEEEeeCCCHHHHHHHHh-------CCCEEEEC
Confidence            699999999999999999999999999999874321      12357889999999999887765       58999999


Q ss_pred             CCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHHHHHHHH
Q 024145           97 AGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKC  176 (272)
Q Consensus        97 ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~~~~  176 (272)
                      |+....               .+++|+.++.++++++..    .+.+++|++||..              |.+.+.+++ 
T Consensus        69 Aa~~~~---------------~~~vNv~GT~nLLeAa~~----~gvkr~V~iSS~~--------------K~aaE~ll~-  114 (854)
T PRK05865         69 AWVRGR---------------NDHINIDGTANVLKAMAE----TGTGRIVFTSSGH--------------QPRVEQMLA-  114 (854)
T ss_pred             CCcccc---------------hHHHHHHHHHHHHHHHHH----cCCCeEEEECCcH--------------HHHHHHHHH-
Confidence            975311               367899999888776653    3456899999853              888777663 


Q ss_pred             HHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhh-c---CCC--CCCCCChHhHHHHHHHHhcCCCCCccccE
Q 024145          177 LAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQ-M---GNL--KGEFLKTDGIANAALYLASDESSYVSGQN  250 (272)
Q Consensus       177 la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~-~---~~~--~~~~~~~~dva~~~~~l~s~~~~~~~G~~  250 (272)
                         +   .|+.+..+.|+.+..|...      ......... .   ...  ...+...+|++++++.++....  ..|..
T Consensus       115 ---~---~gl~~vILRp~~VYGP~~~------~~i~~ll~~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~--~~ggv  180 (854)
T PRK05865        115 ---D---CGLEWVAVRCALIFGRNVD------NWVQRLFALPVLPAGYADRVVQVVHSDDAQRLLVRALLDTV--IDSGP  180 (854)
T ss_pred             ---H---cCCCEEEEEeceEeCCChH------HHHHHHhcCceeccCCCCceEeeeeHHHHHHHHHHHHhCCC--cCCCe
Confidence               2   4899999999999887421      111111110 0   000  1247889999999998875322  23567


Q ss_pred             EEecCceeec
Q 024145          251 LVVDGGFSVV  260 (272)
Q Consensus       251 i~~dgG~~~~  260 (272)
                      |++.+|..++
T Consensus       181 yNIgsg~~~S  190 (854)
T PRK05865        181 VNLAAPGELT  190 (854)
T ss_pred             EEEECCCccc
Confidence            8888876543

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.60  E-value=5e-14  Score=113.15  Aligned_cols=173  Identities=19%  Similarity=0.178  Sum_probs=122.9

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCC
Q 024145           18 AIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNA   97 (272)
Q Consensus        18 vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~a   97 (272)
                      |+|+||||.+|+.++++|+++|++|+++.|++++.++     ..+++++.+|+.|++++.+++.       +.|.+|+++
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~-----~~~~~~~~~d~~d~~~~~~al~-------~~d~vi~~~   68 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED-----SPGVEIIQGDLFDPDSVKAALK-------GADAVIHAA   68 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH-----CTTEEEEESCTTCHHHHHHHHT-------TSSEEEECC
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc-----ccccccceeeehhhhhhhhhhh-------hcchhhhhh
Confidence            6899999999999999999999999999999887655     5789999999999988877666       799999999


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCC---------chhhhhHH
Q 024145           98 GILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGS---------PAYTISKY  168 (272)
Q Consensus        98 g~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~---------~~Y~~sK~  168 (272)
                      |....           +            ...++.++..+.+.+..++|++|+.......+..         ..|...|.
T Consensus        69 ~~~~~-----------~------------~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (183)
T PF13460_consen   69 GPPPK-----------D------------VDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSDEDKPIFPEYARDKR  125 (183)
T ss_dssp             HSTTT-----------H------------HHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEGGTCGGGHHHHHHHH
T ss_pred             hhhcc-----------c------------ccccccccccccccccccceeeeccccCCCCCcccccccccchhhhHHHHH
Confidence            74321           1            2223334444444566789999998765543331         24666665


Q ss_pred             HHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhc
Q 024145          169 GILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLAS  240 (272)
Q Consensus       169 a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  240 (272)
                      ..+.+.    .   ..++....++|+++.++.....    .....    .......+.+.+|+|.+++.++.
T Consensus       126 ~~e~~~----~---~~~~~~~ivrp~~~~~~~~~~~----~~~~~----~~~~~~~~i~~~DvA~~~~~~l~  182 (183)
T PF13460_consen  126 EAEEAL----R---ESGLNWTIVRPGWIYGNPSRSY----RLIKE----GGPQGVNFISREDVAKAIVEALE  182 (183)
T ss_dssp             HHHHHH----H---HSTSEEEEEEESEEEBTTSSSE----EEESS----TSTTSHCEEEHHHHHHHHHHHHH
T ss_pred             HHHHHH----H---hcCCCEEEEECcEeEeCCCcce----eEEec----cCCCCcCcCCHHHHHHHHHHHhC
Confidence            555433    2   2489999999999888763310    00000    11112466789999999998764

...

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.60  E-value=5.2e-14  Score=122.52  Aligned_cols=223  Identities=18%  Similarity=0.137  Sum_probs=157.9

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcC--CeEEEeecCcchHHHHHHH---hCCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENG--AKVVIADVQDKLGEDLADK---LGQDVCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G--~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      ++.++|||||+|++|++++++|.+++  .+|.+++..+....-..+.   .+..+..+.+|+.+..++...++       
T Consensus         3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~-------   75 (361)
T KOG1430|consen    3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQ-------   75 (361)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhcc-------
Confidence            56799999999999999999999998  7899988776532222222   35789999999999888877666       


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccc------------c
Q 024145           89 KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEI------------A  156 (272)
Q Consensus        89 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~------------~  156 (272)
                      .. .+||+|+...+      ..-..+.+..+++|+.|+.++++.+...    +-.++|++||..-..            +
T Consensus        76 ~~-~Vvh~aa~~~~------~~~~~~~~~~~~vNV~gT~nvi~~c~~~----~v~~lIYtSs~~Vvf~g~~~~n~~E~~p  144 (361)
T KOG1430|consen   76 GA-VVVHCAASPVP------DFVENDRDLAMRVNVNGTLNVIEACKEL----GVKRLIYTSSAYVVFGGEPIINGDESLP  144 (361)
T ss_pred             Cc-eEEEeccccCc------cccccchhhheeecchhHHHHHHHHHHh----CCCEEEEecCceEEeCCeecccCCCCCC
Confidence            66 77887774433      2333467889999999999999988774    445699999975432            2


Q ss_pred             CCCC--chhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCC--------CCCCCC
Q 024145          157 GLGS--PAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGN--------LKGEFL  226 (272)
Q Consensus       157 ~~~~--~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~  226 (272)
                      +|..  ..|+.||+-.|.+++..+.   ..+....+++|..+..|..+.   ..+.+......-..        ....+.
T Consensus       145 ~p~~~~d~Y~~sKa~aE~~Vl~an~---~~~l~T~aLR~~~IYGpgd~~---~~~~i~~~~~~g~~~f~~g~~~~~~~~~  218 (361)
T KOG1430|consen  145 YPLKHIDPYGESKALAEKLVLEANG---SDDLYTCALRPPGIYGPGDKR---LLPKIVEALKNGGFLFKIGDGENLNDFT  218 (361)
T ss_pred             CccccccccchHHHHHHHHHHHhcC---CCCeeEEEEccccccCCCCcc---ccHHHHHHHHccCceEEeeccccccceE
Confidence            2322  4899999999999988875   357889999999999988763   22222222211110        113455


Q ss_pred             ChHhHHHHHHHH---hcCCCCCccccEEEecCceeec
Q 024145          227 KTDGIANAALYL---ASDESSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       227 ~~~dva~~~~~l---~s~~~~~~~G~~i~~dgG~~~~  260 (272)
                      ..+.++.+.+-.   +.+.+..++||.+.+..|.-+.
T Consensus       219 ~~~Nva~ahilA~~aL~~~~~~~~Gq~yfI~d~~p~~  255 (361)
T KOG1430|consen  219 YGENVAWAHILAARALLDKSPSVNGQFYFITDDTPVR  255 (361)
T ss_pred             EechhHHHHHHHHHHHHhcCCccCceEEEEeCCCcch
Confidence            566666654421   1225677899999999987664

>PLN02778 3,5-epimerase/4-reductase

Probab=99.59  E-value=3.3e-13  Score=116.92  Aligned_cols=201  Identities=16%  Similarity=0.133  Sum_probs=124.7

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEE
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMY   94 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv   94 (272)
                      .+++|||||+|+||++++++|+++|++|+...                     .|+.+.+.++..++..     ++|+||
T Consensus         9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~---------------------~~~~~~~~v~~~l~~~-----~~D~Vi   62 (298)
T PLN02778          9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS---------------------GRLENRASLEADIDAV-----KPTHVF   62 (298)
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCCEEEEec---------------------CccCCHHHHHHHHHhc-----CCCEEE
Confidence            36899999999999999999999999986432                     2455666555544432     689999


Q ss_pred             eCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccc--ccc----------------c
Q 024145           95 NNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASAC--TEI----------------A  156 (272)
Q Consensus        95 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~--~~~----------------~  156 (272)
                      |+||.....  . .+...++..+.+++|+.++.++++++...-    - +.+++||.+  +..                +
T Consensus        63 H~Aa~~~~~--~-~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~g----v-~~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p  134 (298)
T PLN02778         63 NAAGVTGRP--N-VDWCESHKVETIRANVVGTLTLADVCRERG----L-VLTNYATGCIFEYDDAHPLGSGIGFKEEDTP  134 (298)
T ss_pred             ECCcccCCC--C-chhhhhCHHHHHHHHHHHHHHHHHHHHHhC----C-CEEEEecceEeCCCCCCCcccCCCCCcCCCC
Confidence            999976431  1 112234567889999999999999887632    1 244454432  110                0


Q ss_pred             CCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhc--CCCCCCCCChHhHHHH
Q 024145          157 GLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQM--GNLKGEFLKTDGIANA  234 (272)
Q Consensus       157 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~dva~~  234 (272)
                      .+....|+.||.+.|.+++.++..   .++++     +....+...   .............  ....+.+...+|++++
T Consensus       135 ~~~~s~Yg~sK~~~E~~~~~y~~~---~~lr~-----~~~~~~~~~---~~~~fi~~~~~~~~~~~~~~s~~yv~D~v~a  203 (298)
T PLN02778        135 NFTGSFYSKTKAMVEELLKNYENV---CTLRV-----RMPISSDLS---NPRNFITKITRYEKVVNIPNSMTILDELLPI  203 (298)
T ss_pred             CCCCCchHHHHHHHHHHHHHhhcc---EEeee-----cccCCcccc---cHHHHHHHHHcCCCeeEcCCCCEEHHHHHHH
Confidence            112257999999999999887532   23333     222211100   0011222322221  1122447889999999


Q ss_pred             HHHHhcCCCCCccccEEEecCceeeccCcc
Q 024145          235 ALYLASDESSYVSGQNLVVDGGFSVVNPTV  264 (272)
Q Consensus       235 ~~~l~s~~~~~~~G~~i~~dgG~~~~~~~~  264 (272)
                      ++.++...   .+ ..|++.+|..++.-.+
T Consensus       204 l~~~l~~~---~~-g~yNigs~~~iS~~el  229 (298)
T PLN02778        204 SIEMAKRN---LT-GIYNFTNPGVVSHNEI  229 (298)
T ss_pred             HHHHHhCC---CC-CeEEeCCCCcccHHHH
Confidence            99887532   23 4899987776654443

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.56  E-value=1.2e-13  Score=116.62  Aligned_cols=153  Identities=21%  Similarity=0.259  Sum_probs=119.1

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcc----hHHHHHHHhC--CceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGAKVVIADVQDK----LGEDLADKLG--QDVCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~----~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      +++||||||+|.||.+.+.+|.++|+.|++++.-..    .+....+..+  ..+.++..|++|.+.+++++...     
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~-----   76 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEV-----   76 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhc-----
Confidence            579999999999999999999999999999875332    2223333333  78999999999999998888876     


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccc-----------cC
Q 024145           89 KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEI-----------AG  157 (272)
Q Consensus        89 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~-----------~~  157 (272)
                      ++|.|+|.|+.-...      -+.+.....+..|+.+++++++.+..+-.    ..+|+.||.....           +.
T Consensus        77 ~fd~V~Hfa~~~~vg------eS~~~p~~Y~~nNi~gtlnlLe~~~~~~~----~~~V~sssatvYG~p~~ip~te~~~t  146 (343)
T KOG1371|consen   77 KFDAVMHFAALAAVG------ESMENPLSYYHNNIAGTLNLLEVMKAHNV----KALVFSSSATVYGLPTKVPITEEDPT  146 (343)
T ss_pred             CCceEEeehhhhccc------hhhhCchhheehhhhhHHHHHHHHHHcCC----ceEEEecceeeecCcceeeccCcCCC
Confidence            699999999975541      23455578889999999999988877553    3488888765321           12


Q ss_pred             C-CCchhhhhHHHHHHHHHHHHHHhc
Q 024145          158 L-GSPAYTISKYGILGLVKCLAAELG  182 (272)
Q Consensus       158 ~-~~~~Y~~sK~a~~~~~~~la~e~~  182 (272)
                      . ...+|+.+|.+++..++.+..-+.
T Consensus       147 ~~p~~pyg~tK~~iE~i~~d~~~~~~  172 (343)
T KOG1371|consen  147 DQPTNPYGKTKKAIEEIIHDYNKAYG  172 (343)
T ss_pred             CCCCCcchhhhHHHHHHHHhhhcccc
Confidence            2 456899999999999999887754

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.56  E-value=8e-14  Score=117.71  Aligned_cols=157  Identities=18%  Similarity=0.170  Sum_probs=99.6

Q ss_pred             EeCCCChHHHHHHHHHHHcCC--eEEEeecCcch--H-HHHHHH-------------hCCceEEEEecCCCH------HH
Q 024145           20 ITGGASGIGAMAVELFHENGA--KVVIADVQDKL--G-EDLADK-------------LGQDVCYIHCDISNE------DE   75 (272)
Q Consensus        20 ItGas~giG~aia~~la~~G~--~V~~~~r~~~~--~-~~~~~~-------------~~~~~~~~~~D~~~~------~~   75 (272)
                      ||||||+||.++.++|++++.  +|++..|....  . +.+.+.             ...+++++..|++++      ++
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999986  89998887643  1 222111             257899999999974      34


Q ss_pred             HHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccc
Q 024145           76 VINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEI  155 (272)
Q Consensus        76 ~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~  155 (272)
                      .+.+.+       .+|++||+|+.....         ..+++..++|+.|+..+++.+..    .+..+++++||.....
T Consensus        81 ~~~L~~-------~v~~IiH~Aa~v~~~---------~~~~~~~~~NV~gt~~ll~la~~----~~~~~~~~iSTa~v~~  140 (249)
T PF07993_consen   81 YQELAE-------EVDVIIHCAASVNFN---------APYSELRAVNVDGTRNLLRLAAQ----GKRKRFHYISTAYVAG  140 (249)
T ss_dssp             HHHHHH-------H--EEEE--SS-SBS----------S--EEHHHHHHHHHHHHHHHTS----SS---EEEEEEGGGTT
T ss_pred             hhcccc-------ccceeeecchhhhhc---------ccchhhhhhHHHHHHHHHHHHHh----ccCcceEEeccccccC
Confidence            444433       589999999976541         13445788999999999887753    2223899999942211


Q ss_pred             --c------------------CCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCC
Q 024145          156 --A------------------GLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATG  199 (272)
Q Consensus       156 --~------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~  199 (272)
                        .                  ......|..||+..|.+++..+.+   .|+.+.+++||.+-+.
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~---~g~p~~I~Rp~~i~g~  201 (249)
T PF07993_consen  141 SRPGTIEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQR---HGLPVTIYRPGIIVGD  201 (249)
T ss_dssp             S-TTT--SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHH---H---EEEEEE-EEE-S
T ss_pred             CCCCcccccccccccccchhhccCCccHHHHHHHHHHHHHHHHhc---CCceEEEEecCccccc
Confidence              1                  012248999999999999999887   5789999999988773

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=99.53  E-value=8e-13  Score=112.34  Aligned_cols=184  Identities=15%  Similarity=0.118  Sum_probs=154.2

Q ss_pred             CcEEEEeCC-CChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhC-----
Q 024145           15 GKVAIITGG-ASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFG-----   88 (272)
Q Consensus        15 ~k~vlItGa-s~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g-----   88 (272)
                      ..+|||.|. +.-|++.++.-|-++|+-|+++..+.+......++....+.....|..++.++...+.++.+...     
T Consensus         3 ~evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed~~~ve~e~~~dI~~L~ld~~~~~~~~~~l~~f~~~L~~p~~p   82 (299)
T PF08643_consen    3 KEVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAEDEKYVESEDRPDIRPLWLDDSDPSSIHASLSRFASLLSRPHVP   82 (299)
T ss_pred             eeEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHHHHHHHhccCCCCCCcccCCCCCcchHHHHHHHHHHhcCCCCC
Confidence            358999995 78999999999999999999999988877666666566788888899888888888877776543     


Q ss_pred             ---------CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCC--CCceEEE-Eeccccccc
Q 024145           89 ---------KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQ--QKGCILF-TASACTEIA  156 (272)
Q Consensus        89 ---------~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~g~iv~-iss~~~~~~  156 (272)
                               .+..||....... +.++++.++.+.|.+.++.|+..++.+++.++|++..+  .+.+||+ .-|+.....
T Consensus        83 ~~~~~~h~l~L~svi~~Psl~y-p~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~~~~iil~~Psi~ssl~  161 (299)
T PF08643_consen   83 FPGAPPHHLQLKSVIFIPSLSY-PTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQKSKIILFNPSISSSLN  161 (299)
T ss_pred             CCCCCCceeEEEEEEEecCCCC-CCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEeCchhhccC
Confidence                     3555666555444 34899999999999999999999999999999999872  3455555 456778888


Q ss_pred             CCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCC
Q 024145          157 GLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATG  199 (272)
Q Consensus       157 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~  199 (272)
                      .|.++.-.....++.+|..+|.+|+.+++|.|..++.|.++-.
T Consensus       162 ~PfhspE~~~~~al~~~~~~LrrEl~~~~I~V~~i~LG~l~i~  204 (299)
T PF08643_consen  162 PPFHSPESIVSSALSSFFTSLRRELRPHNIDVTQIKLGNLDIG  204 (299)
T ss_pred             CCccCHHHHHHHHHHHHHHHHHHHhhhcCCceEEEEeeeeccc
Confidence            9999999999999999999999999999999999999988766

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.52  E-value=2.4e-13  Score=117.12  Aligned_cols=200  Identities=15%  Similarity=0.071  Sum_probs=128.9

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEeC
Q 024145           17 VAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNN   96 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~   96 (272)
                      ++||||++|.||.++.++|.++|++|+.+.|.                  .+|++|.+++++++.+.     ++|+|||+
T Consensus         2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r~------------------~~dl~d~~~~~~~~~~~-----~pd~Vin~   58 (286)
T PF04321_consen    2 RILITGASGFLGSALARALKERGYEVIATSRS------------------DLDLTDPEAVAKLLEAF-----KPDVVINC   58 (286)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTTSEEEEEESTT------------------CS-TTSHHHHHHHHHHH-------SEEEE-
T ss_pred             EEEEECCCCHHHHHHHHHHhhCCCEEEEeCch------------------hcCCCCHHHHHHHHHHh-----CCCeEecc
Confidence            78999999999999999999999999998775                  57999999998888776     69999999


Q ss_pred             CCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccC-----------CCCchhhh
Q 024145           97 AGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAG-----------LGSPAYTI  165 (272)
Q Consensus        97 ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~-----------~~~~~Y~~  165 (272)
                      ||....      +.-+++.+..+.+|+.++..+.+.+..     .+.++|++||..-..+.           .+...|+-
T Consensus        59 aa~~~~------~~ce~~p~~a~~iN~~~~~~la~~~~~-----~~~~li~~STd~VFdG~~~~~y~E~d~~~P~~~YG~  127 (286)
T PF04321_consen   59 AAYTNV------DACEKNPEEAYAINVDATKNLAEACKE-----RGARLIHISTDYVFDGDKGGPYTEDDPPNPLNVYGR  127 (286)
T ss_dssp             -----H------HHHHHSHHHHHHHHTHHHHHHHHHHHH-----CT-EEEEEEEGGGS-SSTSSSB-TTS----SSHHHH
T ss_pred             ceeecH------HhhhhChhhhHHHhhHHHHHHHHHHHH-----cCCcEEEeeccEEEcCCcccccccCCCCCCCCHHHH
Confidence            997543      123455778999999999999998865     34689999998544332           12358999


Q ss_pred             hHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhc------CCCCCCCCChHhHHHHHHHHh
Q 024145          166 SKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQM------GNLKGEFLKTDGIANAALYLA  239 (272)
Q Consensus       166 sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~dva~~~~~l~  239 (272)
                      +|...|..++...    +   ...+++++++..+...   .....+.+.+...      ....+.....+|+|..+..++
T Consensus       128 ~K~~~E~~v~~~~----~---~~~IlR~~~~~g~~~~---~~~~~~~~~~~~~~~i~~~~d~~~~p~~~~dlA~~i~~l~  197 (286)
T PF04321_consen  128 SKLEGEQAVRAAC----P---NALILRTSWVYGPSGR---NFLRWLLRRLRQGEPIKLFDDQYRSPTYVDDLARVILELI  197 (286)
T ss_dssp             HHHHHHHHHHHH-----S---SEEEEEE-SEESSSSS---SHHHHHHHHHHCTSEEEEESSCEE--EEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhc----C---CEEEEecceecccCCC---chhhhHHHHHhcCCeeEeeCCceeCCEEHHHHHHHHHHHH
Confidence            9999998877621    1   5688899998877211   1111222222211      111234466799999999998


Q ss_pred             cCCC-CCccccEEEecCceeec
Q 024145          240 SDES-SYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       240 s~~~-~~~~G~~i~~dgG~~~~  260 (272)
                      .... ..-...++++.|...++
T Consensus       198 ~~~~~~~~~~Giyh~~~~~~~S  219 (286)
T PF04321_consen  198 EKNLSGASPWGIYHLSGPERVS  219 (286)
T ss_dssp             HHHHH-GGG-EEEE---BS-EE
T ss_pred             HhcccccccceeEEEecCcccC
Confidence            6432 11235677777766554

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=99.52  E-value=1.3e-11  Score=94.19  Aligned_cols=216  Identities=19%  Similarity=0.191  Sum_probs=156.9

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHh--CCccE
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKF--GKLDI   92 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g~id~   92 (272)
                      -.+|+|-|+-|.+|.++++.|-.+++-|.-++-.+...      . ..-..+..|-+=.|+-+.+.+++.+..  .++|.
T Consensus         3 agrVivYGGkGALGSacv~~FkannywV~siDl~eNe~------A-d~sI~V~~~~swtEQe~~v~~~vg~sL~gekvDa   75 (236)
T KOG4022|consen    3 AGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQ------A-DSSILVDGNKSWTEQEQSVLEQVGSSLQGEKVDA   75 (236)
T ss_pred             CceEEEEcCcchHhHHHHHHHHhcCeEEEEEeeccccc------c-cceEEecCCcchhHHHHHHHHHHHHhhcccccce
Confidence            35789999999999999999999999887666433211      0 112344455554566666677776654  36999


Q ss_pred             EEeCCCCCCCCCCCCCC-CCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHHH
Q 024145           93 MYNNAGILDRSFGSILD-TPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGIL  171 (272)
Q Consensus        93 lv~~ag~~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~  171 (272)
                      +++-||.+..  +.-.. .-....+-+++..+.....-.+.+..|++  ..|..-......+..+.|+...|+++|+|+.
T Consensus        76 v~CVAGGWAG--GnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK--~GGLL~LtGAkaAl~gTPgMIGYGMAKaAVH  151 (236)
T KOG4022|consen   76 VFCVAGGWAG--GNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLK--PGGLLQLTGAKAALGGTPGMIGYGMAKAAVH  151 (236)
T ss_pred             EEEeeccccC--CCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccC--CCceeeecccccccCCCCcccchhHHHHHHH
Confidence            9999997754  22111 11233456777788877777777777774  4565666666678889999999999999999


Q ss_pred             HHHHHHHHHhc--CCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCcccc
Q 024145          172 GLVKCLAAELG--QYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQ  249 (272)
Q Consensus       172 ~~~~~la~e~~--~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  249 (272)
                      +++++++.+-.  +.|-.+..|.|-..+|||.++-..+.            .++.+...+.+++.++....+.++.-+|.
T Consensus       152 qLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNRKwMP~A------------DfssWTPL~fi~e~flkWtt~~~RPssGs  219 (236)
T KOG4022|consen  152 QLTSSLAAKDSGLPDGSAALTILPVTLDTPMNRKWMPNA------------DFSSWTPLSFISEHFLKWTTETSRPSSGS  219 (236)
T ss_pred             HHHHHhcccccCCCCCceeEEEeeeeccCccccccCCCC------------cccCcccHHHHHHHHHHHhccCCCCCCCc
Confidence            99999998853  35778899999999999998532211            13677888999999998887777777888


Q ss_pred             EEEe
Q 024145          250 NLVV  253 (272)
Q Consensus       250 ~i~~  253 (272)
                      .+.+
T Consensus       220 Llqi  223 (236)
T KOG4022|consen  220 LLQI  223 (236)
T ss_pred             eEEE
Confidence            7654

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.50  E-value=2.1e-12  Score=108.91  Aligned_cols=181  Identities=19%  Similarity=0.144  Sum_probs=130.2

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCC
Q 024145           18 AIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNA   97 (272)
Q Consensus        18 vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~a   97 (272)
                      +||||++|-+|.++.+.|. .+++|+.++|.+                  +|++|++.+.+++.+.     ++|+|||+|
T Consensus         3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~------------------~Ditd~~~v~~~i~~~-----~PDvVIn~A   58 (281)
T COG1091           3 ILITGANGQLGTELRRALP-GEFEVIATDRAE------------------LDITDPDAVLEVIRET-----RPDVVINAA   58 (281)
T ss_pred             EEEEcCCChHHHHHHHHhC-CCceEEeccCcc------------------ccccChHHHHHHHHhh-----CCCEEEECc
Confidence            8999999999999999999 778999888754                  7999999999998877     899999999


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCC-----------CCchhhhh
Q 024145           98 GILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGL-----------GSPAYTIS  166 (272)
Q Consensus        98 g~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~-----------~~~~Y~~s  166 (272)
                      ++...      +.-+.+.+..+.+|..++.++.+++..     -+.++|++|+-.-..|..           +...|+.|
T Consensus        59 Ayt~v------D~aE~~~e~A~~vNa~~~~~lA~aa~~-----~ga~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvYG~s  127 (281)
T COG1091          59 AYTAV------DKAESEPELAFAVNATGAENLARAAAE-----VGARLVHISTDYVFDGEKGGPYKETDTPNPLNVYGRS  127 (281)
T ss_pred             ccccc------ccccCCHHHHHHhHHHHHHHHHHHHHH-----hCCeEEEeecceEecCCCCCCCCCCCCCCChhhhhHH
Confidence            98754      223444678899999999999998864     456799999865443322           33479999


Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCC------CCCCCCChHhHHHHHHHHhc
Q 024145          167 KYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGN------LKGEFLKTDGIANAALYLAS  240 (272)
Q Consensus       167 K~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~dva~~~~~l~s  240 (272)
                      |.+.|..++...    +   +...++..|+......   .-...+.+..+.-..      ..+.-...+|+|+++..++.
T Consensus       128 Kl~GE~~v~~~~----~---~~~I~Rtswv~g~~g~---nFv~tml~la~~~~~l~vv~Dq~gsPt~~~dlA~~i~~ll~  197 (281)
T COG1091         128 KLAGEEAVRAAG----P---RHLILRTSWVYGEYGN---NFVKTMLRLAKEGKELKVVDDQYGSPTYTEDLADAILELLE  197 (281)
T ss_pred             HHHHHHHHHHhC----C---CEEEEEeeeeecCCCC---CHHHHHHHHhhcCCceEEECCeeeCCccHHHHHHHHHHHHh
Confidence            999998887664    2   3356666666654332   001111111111111      12445677999999999886


Q ss_pred             CCC
Q 024145          241 DES  243 (272)
Q Consensus       241 ~~~  243 (272)
                      ...
T Consensus       198 ~~~  200 (281)
T COG1091         198 KEK  200 (281)
T ss_pred             ccc
Confidence            553

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.50  E-value=5e-12  Score=130.28  Aligned_cols=222  Identities=14%  Similarity=0.113  Sum_probs=145.4

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcC----CeEEEeecCcchHHHH---HHH----------hCCceEEEEecCCCH---
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENG----AKVVIADVQDKLGEDL---ADK----------LGQDVCYIHCDISNE---   73 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G----~~V~~~~r~~~~~~~~---~~~----------~~~~~~~~~~D~~~~---   73 (272)
                      +.++++||||+|+||.+++++|++++    ++|+...|........   .+.          ...++.++..|++++   
T Consensus       970 ~~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lg 1049 (1389)
T TIGR03443       970 TPITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFG 1049 (1389)
T ss_pred             CCceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCC
Confidence            35799999999999999999999987    7888888875433221   111          123688999999754   


Q ss_pred             ---HHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEec
Q 024145           74 ---DEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTAS  150 (272)
Q Consensus        74 ---~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss  150 (272)
                         +..+.+.       ..+|++||+|+....      ..+   +......|+.++..+++.+..    .+..+++++||
T Consensus      1050 l~~~~~~~l~-------~~~d~iiH~Aa~~~~------~~~---~~~~~~~nv~gt~~ll~~a~~----~~~~~~v~vSS 1109 (1389)
T TIGR03443      1050 LSDEKWSDLT-------NEVDVIIHNGALVHW------VYP---YSKLRDANVIGTINVLNLCAE----GKAKQFSFVSS 1109 (1389)
T ss_pred             cCHHHHHHHH-------hcCCEEEECCcEecC------ccC---HHHHHHhHHHHHHHHHHHHHh----CCCceEEEEeC
Confidence               3333322       268999999986532      112   334456799999999987754    23357999999


Q ss_pred             cccccc-----------------C-----------CCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCccc
Q 024145          151 ACTEIA-----------------G-----------LGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSM  202 (272)
Q Consensus       151 ~~~~~~-----------------~-----------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~  202 (272)
                      ......                 .           .....|+.||.+.+.+++.++.    .|+.+.+++||.+..+...
T Consensus      1110 ~~v~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~----~g~~~~i~Rpg~v~G~~~~ 1185 (1389)
T TIGR03443      1110 TSALDTEYYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGK----RGLRGCIVRPGYVTGDSKT 1185 (1389)
T ss_pred             eeecCcccccchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHh----CCCCEEEECCCccccCCCc
Confidence            754310                 0           0123699999999999887543    4899999999999877543


Q ss_pred             CCCCChhHHHHHHhh---c--CCC---CCCCCChHhHHHHHHHHhcCCCCCccccEEEecCceee
Q 024145          203 KGGVDPALIESSMSQ---M--GNL---KGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSV  259 (272)
Q Consensus       203 ~~~~~~~~~~~~~~~---~--~~~---~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~  259 (272)
                      ......+.+......   .  .+.   ...+...++++++++.++........+.++++.++..+
T Consensus      1186 g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~~~ 1250 (1389)
T TIGR03443      1186 GATNTDDFLLRMLKGCIQLGLIPNINNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHPRI 1250 (1389)
T ss_pred             CCCCchhHHHHHHHHHHHhCCcCCCCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCCCC
Confidence            222222222222221   1  111   14577889999999988754432234457777766443

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.50  E-value=9.6e-13  Score=113.67  Aligned_cols=174  Identities=18%  Similarity=0.157  Sum_probs=126.0

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcC-CeEEEeecCcch------HHHHHH-------HhCCceEEEEecCC------CHHH
Q 024145           16 KVAIITGGASGIGAMAVELFHENG-AKVVIADVQDKL------GEDLAD-------KLGQDVCYIHCDIS------NEDE   75 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G-~~V~~~~r~~~~------~~~~~~-------~~~~~~~~~~~D~~------~~~~   75 (272)
                      +++|+|||||++|+.+...|+.+- ++|++..|.+..      +++..+       ....++..+..|++      +...
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            479999999999999999998874 588887775442      222222       12458999999997      4566


Q ss_pred             HHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCce-EEEEeccccc
Q 024145           76 VINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGC-ILFTASACTE  154 (272)
Q Consensus        76 ~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~-iv~iss~~~~  154 (272)
                      ++.+.+       .+|.+|||++.....         ..+.+....||.|+..+++.+..     ++++ +.++||++..
T Consensus        81 ~~~La~-------~vD~I~H~gA~Vn~v---------~pYs~L~~~NVlGT~evlrLa~~-----gk~Kp~~yVSsisv~  139 (382)
T COG3320          81 WQELAE-------NVDLIIHNAALVNHV---------FPYSELRGANVLGTAEVLRLAAT-----GKPKPLHYVSSISVG  139 (382)
T ss_pred             HHHHhh-------hcceEEecchhhccc---------CcHHHhcCcchHhHHHHHHHHhc-----CCCceeEEEeeeeec
Confidence            666666       689999999987642         33567778899999999887754     3344 8999998643


Q ss_pred             cc--------------------CCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHH
Q 024145          155 IA--------------------GLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESS  214 (272)
Q Consensus       155 ~~--------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~  214 (272)
                      ..                    .....+|+.||++.|.+++.....    |+++.+++||++-.+-..-.....+...+.
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~r----GLpv~I~Rpg~I~gds~tG~~n~~D~~~Rl  215 (382)
T COG3320         140 ETEYYSNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAGDR----GLPVTIFRPGYITGDSRTGALNTRDFLTRL  215 (382)
T ss_pred             cccccCCCccccccccccccccCccCCCcchhHHHHHHHHHHHhhc----CCCeEEEecCeeeccCccCccccchHHHHH
Confidence            21                    112258999999999999887665    899999999999887764333333444443

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.46  E-value=1.2e-12  Score=112.59  Aligned_cols=203  Identities=16%  Similarity=0.126  Sum_probs=123.4

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCC-ccEEEe
Q 024145           17 VAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGK-LDIMYN   95 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~-id~lv~   95 (272)
                      +++||||||.+|++++++|+++|++|.+..|+++...      ...+..+.+|+.|+++++++++.. +...+ +|.+++
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~------~~~~~~~~~d~~d~~~l~~a~~~~-~~~~g~~d~v~~   73 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA------GPNEKHVKFDWLDEDTWDNPFSSD-DGMEPEISAVYL   73 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc------CCCCccccccCCCHHHHHHHHhcc-cCcCCceeEEEE
Confidence            3799999999999999999999999999999876432      134567789999999998877543 22235 899999


Q ss_pred             CCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHHHHHHH
Q 024145           96 NAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVK  175 (272)
Q Consensus        96 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~~~  175 (272)
                      +++....           ...        ....+++++    ++.+-.+||++||.....+.       ..+...+.+.+
T Consensus        74 ~~~~~~~-----------~~~--------~~~~~i~aa----~~~gv~~~V~~Ss~~~~~~~-------~~~~~~~~~l~  123 (285)
T TIGR03649        74 VAPPIPD-----------LAP--------PMIKFIDFA----RSKGVRRFVLLSASIIEKGG-------PAMGQVHAHLD  123 (285)
T ss_pred             eCCCCCC-----------hhH--------HHHHHHHHH----HHcCCCEEEEeeccccCCCC-------chHHHHHHHHH
Confidence            8763210           001        111233333    33455689999986543321       12322222221


Q ss_pred             HHHHHhcCCCcEEEEEeCCcccCCcccCCCC-ChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccccEEEec
Q 024145          176 CLAAELGQYGIRVNCVSPYGLATGMSMKGGV-DPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVD  254 (272)
Q Consensus       176 ~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~d  254 (272)
                          +  ..|+....++|+++...+...... ..................+.+++|+|+++..++.++..  .|+.+++.
T Consensus       124 ----~--~~gi~~tilRp~~f~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~Dva~~~~~~l~~~~~--~~~~~~l~  195 (285)
T TIGR03649       124 ----S--LGGVEYTVLRPTWFMENFSEEFHVEAIRKENKIYSATGDGKIPFVSADDIARVAYRALTDKVA--PNTDYVVL  195 (285)
T ss_pred             ----h--ccCCCEEEEeccHHhhhhcccccccccccCCeEEecCCCCccCcccHHHHHHHHHHHhcCCCc--CCCeEEee
Confidence                1  138999999999877554221000 00000000111111124578899999999988865432  36677777


Q ss_pred             CceeeccCcc
Q 024145          255 GGFSVVNPTV  264 (272)
Q Consensus       255 gG~~~~~~~~  264 (272)
                      |+..+....+
T Consensus       196 g~~~~s~~ei  205 (285)
T TIGR03649       196 GPELLTYDDV  205 (285)
T ss_pred             CCccCCHHHH
Confidence            7766654443

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.44  E-value=1.1e-11  Score=106.57  Aligned_cols=209  Identities=12%  Similarity=0.019  Sum_probs=121.0

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCC
Q 024145           18 AIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNA   97 (272)
Q Consensus        18 vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~a   97 (272)
                      +|||||+|+||.++++.|+++|++|++++|+........     ...  ..|... ..       ..+.+..+|+|||++
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----~~~--~~~~~~-~~-------~~~~~~~~D~Vvh~a   65 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTK-----WEG--YKPWAP-LA-------ESEALEGADAVINLA   65 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccc-----cee--eecccc-cc-------hhhhcCCCCEEEECC
Confidence            589999999999999999999999999999876532211     001  112221 11       122334799999999


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCC------------CCchhhh
Q 024145           98 GILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGL------------GSPAYTI  165 (272)
Q Consensus        98 g~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~------------~~~~Y~~  165 (272)
                      |....    ......+.....+++|+.++..+++++...-.  +..++|+.|+.. .++..            ....|..
T Consensus        66 ~~~~~----~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~--~~~~~i~~S~~~-~yg~~~~~~~~E~~~~~~~~~~~~  138 (292)
T TIGR01777        66 GEPIA----DKRWTEERKQEIRDSRIDTTRALVEAIAAAEQ--KPKVFISASAVG-YYGTSEDRVFTEEDSPAGDDFLAE  138 (292)
T ss_pred             CCCcc----cccCCHHHHHHHHhcccHHHHHHHHHHHhcCC--CceEEEEeeeEE-EeCCCCCCCcCcccCCCCCChHHH
Confidence            96432    12234456677889999999988888765311  112344444432 22111            1112233


Q ss_pred             hHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhh-------cCCCCCCCCChHhHHHHHHHH
Q 024145          166 SKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQ-------MGNLKGEFLKTDGIANAALYL  238 (272)
Q Consensus       166 sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~dva~~~~~l  238 (272)
                      .+...+...+    .+.+.++.+..++|+.+..|...   ..... ......       .......+...+|+++++..+
T Consensus       139 ~~~~~e~~~~----~~~~~~~~~~ilR~~~v~G~~~~---~~~~~-~~~~~~~~~~~~g~~~~~~~~i~v~Dva~~i~~~  210 (292)
T TIGR01777       139 LCRDWEEAAQ----AAEDLGTRVVLLRTGIVLGPKGG---ALAKM-LPPFRLGLGGPLGSGRQWFSWIHIEDLVQLILFA  210 (292)
T ss_pred             HHHHHHHHhh----hchhcCCceEEEeeeeEECCCcc---hhHHH-HHHHhcCcccccCCCCcccccEeHHHHHHHHHHH
Confidence            3333333322    22345799999999999887421   11111 111110       011124678899999999998


Q ss_pred             hcCCCCCccccEEEecCceee
Q 024145          239 ASDESSYVSGQNLVVDGGFSV  259 (272)
Q Consensus       239 ~s~~~~~~~G~~i~~dgG~~~  259 (272)
                      +....  ..| .+++.++..+
T Consensus       211 l~~~~--~~g-~~~~~~~~~~  228 (292)
T TIGR01777       211 LENAS--ISG-PVNATAPEPV  228 (292)
T ss_pred             hcCcc--cCC-ceEecCCCcc
Confidence            85432  233 6777666544

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=99.41  E-value=3.8e-12  Score=105.43  Aligned_cols=225  Identities=17%  Similarity=0.144  Sum_probs=158.1

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHc--CCeEEEeecCc-chHHHHHHHh--CCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           16 KVAIITGGASGIGAMAVELFHEN--GAKVVIADVQD-KLGEDLADKL--GQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~--G~~V~~~~r~~-~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      |.++||||.|+||...+..+...  .++.+..+.-. .......+++  ..+..+++.|+.+...+..++..     ..+
T Consensus         7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~-----~~i   81 (331)
T KOG0747|consen    7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRNSPNYKFVEGDIADADLVLYLFET-----EEI   81 (331)
T ss_pred             ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhccCCCceEeeccccchHHHHhhhcc-----Cch
Confidence            89999999999999999999887  44443332100 0001122222  35789999999998887766653     379


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccccc--c----------cCC
Q 024145           91 DIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTE--I----------AGL  158 (272)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~--~----------~~~  158 (272)
                      |.|+|.|+..+.      +.+.-+--+..+.|+.++..+++......   +-.++|.+|+-...  .          ...
T Consensus        82 d~vihfaa~t~v------d~s~~~~~~~~~nnil~t~~Lle~~~~sg---~i~~fvhvSTdeVYGds~~~~~~~E~s~~n  152 (331)
T KOG0747|consen   82 DTVIHFAAQTHV------DRSFGDSFEFTKNNILSTHVLLEAVRVSG---NIRRFVHVSTDEVYGDSDEDAVVGEASLLN  152 (331)
T ss_pred             hhhhhhHhhhhh------hhhcCchHHHhcCCchhhhhHHHHHHhcc---CeeEEEEecccceecCccccccccccccCC
Confidence            999999997654      22333445667889999999999887654   34569999886321  1          112


Q ss_pred             CCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHh-------hcCCCCCCCCChHhH
Q 024145          159 GSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMS-------QMGNLKGEFLKTDGI  231 (272)
Q Consensus       159 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~dv  231 (272)
                      ...+|++||+|.+++++++.+.   +|+.+..++-+.|..|..-.....+.+..-...       ..+...+.++..||+
T Consensus       153 PtnpyAasKaAaE~~v~Sy~~s---y~lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~  229 (331)
T KOG0747|consen  153 PTNPYAASKAAAEMLVRSYGRS---YGLPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDV  229 (331)
T ss_pred             CCCchHHHHHHHHHHHHHHhhc---cCCcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCcceecCcccceeeEeHHHH
Confidence            3458999999999999999988   589999999999999987654444443332211       112223667899999


Q ss_pred             HHHHHHHhcCCCCCccccEEEecCceeec
Q 024145          232 ANAALYLASDESSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       232 a~~~~~l~s~~~~~~~G~~i~~dgG~~~~  260 (272)
                      ++++...+....   .|+++++.--.-..
T Consensus       230 ~ea~~~v~~Kg~---~geIYNIgtd~e~~  255 (331)
T KOG0747|consen  230 SEAFKAVLEKGE---LGEIYNIGTDDEMR  255 (331)
T ss_pred             HHHHHHHHhcCC---ccceeeccCcchhh
Confidence            999998886632   69999887654443

>PLN00016 RNA-binding protein; Provisional

Probab=99.40  E-value=6.9e-12  Score=112.29  Aligned_cols=206  Identities=15%  Similarity=0.127  Sum_probs=127.7

Q ss_pred             CCCcEEEEe----CCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHH-------HHh-CCceEEEEecCCCHHHHHHHH
Q 024145           13 LEGKVAIIT----GGASGIGAMAVELFHENGAKVVIADVQDKLGEDLA-------DKL-GQDVCYIHCDISNEDEVINLV   80 (272)
Q Consensus        13 l~~k~vlIt----Gas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~-------~~~-~~~~~~~~~D~~~~~~~~~~~   80 (272)
                      ...+++|||    ||+|.||++++++|+++|++|++++|+........       .++ ...+.++.+|+.|   +++++
T Consensus        50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d---~~~~~  126 (378)
T PLN00016         50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPAD---VKSKV  126 (378)
T ss_pred             cccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHH---HHhhh
Confidence            344789999    99999999999999999999999999865432111       112 2347888898866   33333


Q ss_pred             HHHHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCC-
Q 024145           81 DTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLG-  159 (272)
Q Consensus        81 ~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~-  159 (272)
                      .     ..++|+|||+++..           .+           +...+++++.    +.+-.++|++||......... 
T Consensus       127 ~-----~~~~d~Vi~~~~~~-----------~~-----------~~~~ll~aa~----~~gvkr~V~~SS~~vyg~~~~~  175 (378)
T PLN00016        127 A-----GAGFDVVYDNNGKD-----------LD-----------EVEPVADWAK----SPGLKQFLFCSSAGVYKKSDEP  175 (378)
T ss_pred             c-----cCCccEEEeCCCCC-----------HH-----------HHHHHHHHHH----HcCCCEEEEEccHhhcCCCCCC
Confidence            2     12689999987521           11           2223344433    334558999999754321111 


Q ss_pred             -------CchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhc-CCC------CCCC
Q 024145          160 -------SPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQM-GNL------KGEF  225 (272)
Q Consensus       160 -------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~-~~~------~~~~  225 (272)
                             ..++. +|...+.+.+    +   .++.+..++|+.+.++..... ............. .+.      ...+
T Consensus       176 p~~E~~~~~p~~-sK~~~E~~l~----~---~~l~~~ilRp~~vyG~~~~~~-~~~~~~~~~~~~~~i~~~g~g~~~~~~  246 (378)
T PLN00016        176 PHVEGDAVKPKA-GHLEVEAYLQ----K---LGVNWTSFRPQYIYGPGNNKD-CEEWFFDRLVRGRPVPIPGSGIQLTQL  246 (378)
T ss_pred             CCCCCCcCCCcc-hHHHHHHHHH----H---cCCCeEEEeceeEECCCCCCc-hHHHHHHHHHcCCceeecCCCCeeece
Confidence                   01122 7888877543    2   479999999999998864321 0011111221111 011      1246


Q ss_pred             CChHhHHHHHHHHhcCCCCCccccEEEecCceeeccCc
Q 024145          226 LKTDGIANAALYLASDESSYVSGQNLVVDGGFSVVNPT  263 (272)
Q Consensus       226 ~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~  263 (272)
                      ...+|+++++..++....  ..|+.|++.++..+....
T Consensus       247 i~v~Dva~ai~~~l~~~~--~~~~~yni~~~~~~s~~e  282 (378)
T PLN00016        247 GHVKDLASMFALVVGNPK--AAGQIFNIVSDRAVTFDG  282 (378)
T ss_pred             ecHHHHHHHHHHHhcCcc--ccCCEEEecCCCccCHHH
Confidence            789999999998886532  357999998887654333

>PRK12320 hypothetical protein; Provisional

Probab=99.37  E-value=6.6e-11  Score=111.94  Aligned_cols=193  Identities=14%  Similarity=0.053  Sum_probs=127.1

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEeC
Q 024145           17 VAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNN   96 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~   96 (272)
                      ++|||||+|+||++++++|+++|++|++++|.....      ....+.++.+|++++. +.+++.       ++|++||+
T Consensus         2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~------~~~~ve~v~~Dl~d~~-l~~al~-------~~D~VIHL   67 (699)
T PRK12320          2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA------LDPRVDYVCASLRNPV-LQELAG-------EADAVIHL   67 (699)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc------ccCCceEEEccCCCHH-HHHHhc-------CCCEEEEc
Confidence            699999999999999999999999999999865421      2246789999999974 433332       68999999


Q ss_pred             CCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHHHHHHHH
Q 024145           97 AGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKC  176 (272)
Q Consensus        97 ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~~~~  176 (272)
                      ++....          +    ..++|+.++.++++++..    .+ .++|++||..+.   +  ..|.    ..|.++  
T Consensus        68 Aa~~~~----------~----~~~vNv~Gt~nLleAA~~----~G-vRiV~~SS~~G~---~--~~~~----~aE~ll--  117 (699)
T PRK12320         68 APVDTS----------A----PGGVGITGLAHVANAAAR----AG-ARLLFVSQAAGR---P--ELYR----QAETLV--  117 (699)
T ss_pred             CccCcc----------c----hhhHHHHHHHHHHHHHHH----cC-CeEEEEECCCCC---C--cccc----HHHHHH--
Confidence            985321          0    124799999999888754    22 379999886431   1  1232    233332  


Q ss_pred             HHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhc-CCCCCCCCChHhHHHHHHHHhcCCCCCccccEEEecC
Q 024145          177 LAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQM-GNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDG  255 (272)
Q Consensus       177 la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dg  255 (272)
                        ..   .++.+..+.|+.+.++....  .....+...+... ....-.++..+|++++++.+++...   +| +|++.+
T Consensus       118 --~~---~~~p~~ILR~~nVYGp~~~~--~~~r~I~~~l~~~~~~~pI~vIyVdDvv~alv~al~~~~---~G-iyNIG~  186 (699)
T PRK12320        118 --ST---GWAPSLVIRIAPPVGRQLDW--MVCRTVATLLRSKVSARPIRVLHLDDLVRFLVLALNTDR---NG-VVDLAT  186 (699)
T ss_pred             --Hh---cCCCEEEEeCceecCCCCcc--cHhHHHHHHHHHHHcCCceEEEEHHHHHHHHHHHHhCCC---CC-EEEEeC
Confidence              22   34788999999999884321  1112222222211 1111234689999999988876432   35 999999


Q ss_pred             ceeeccCcc
Q 024145          256 GFSVVNPTV  264 (272)
Q Consensus       256 G~~~~~~~~  264 (272)
                      |..++.-.+
T Consensus       187 ~~~~Si~el  195 (699)
T PRK12320        187 PDTTNVVTA  195 (699)
T ss_pred             CCeeEHHHH
Confidence            987754443

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=99.35  E-value=5.5e-11  Score=98.64  Aligned_cols=206  Identities=17%  Similarity=0.140  Sum_probs=142.4

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHH-Hh-CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLAD-KL-GQDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~-~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      .....+++++||||.|+||++++.+|..+|+.|++.+.-......... -+ ...+..+..|+..+     ++.      
T Consensus        22 ~~p~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv~~p-----l~~------   90 (350)
T KOG1429|consen   22 VKPSQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIGHPNFELIRHDVVEP-----LLK------   90 (350)
T ss_pred             ccCCCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhccCcceeEEEeechhH-----HHH------
Confidence            455678999999999999999999999999999998864433222222 12 24677777888665     333      


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccc------------
Q 024145           88 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEI------------  155 (272)
Q Consensus        88 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~------------  155 (272)
                       .+|.++|.|....+.  .+.    .....++..|+.+++.++..+..     -..|++..|+..-+.            
T Consensus        91 -evD~IyhLAapasp~--~y~----~npvktIktN~igtln~lglakr-----v~aR~l~aSTseVYgdp~~hpq~e~yw  158 (350)
T KOG1429|consen   91 -EVDQIYHLAAPASPP--HYK----YNPVKTIKTNVIGTLNMLGLAKR-----VGARFLLASTSEVYGDPLVHPQVETYW  158 (350)
T ss_pred             -HhhhhhhhccCCCCc--ccc----cCccceeeecchhhHHHHHHHHH-----hCceEEEeecccccCCcccCCCccccc
Confidence             479999999876552  111    12245688999999998887765     335677777754321            


Q ss_pred             ----cCCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCC--ChhHHHHHHhhc-------CCCC
Q 024145          156 ----AGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGV--DPALIESSMSQM-------GNLK  222 (272)
Q Consensus       156 ----~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~--~~~~~~~~~~~~-------~~~~  222 (272)
                          +...++.|...|.+.|.|+..+.++   .||.|...++..+..|.......  ...+....+...       +...
T Consensus       159 g~vnpigpr~cydegKr~aE~L~~~y~k~---~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qt  235 (350)
T KOG1429|consen  159 GNVNPIGPRSCYDEGKRVAETLCYAYHKQ---EGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQT  235 (350)
T ss_pred             cccCcCCchhhhhHHHHHHHHHHHHhhcc---cCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcce
Confidence                1124458999999999999998887   79999999998888886543211  111222222211       2234


Q ss_pred             CCCCChHhHHHHHHHHhcC
Q 024145          223 GEFLKTDGIANAALYLASD  241 (272)
Q Consensus       223 ~~~~~~~dva~~~~~l~s~  241 (272)
                      +.|+..+|+++.++.|...
T Consensus       236 RSF~yvsD~Vegll~Lm~s  254 (350)
T KOG1429|consen  236 RSFQYVSDLVEGLLRLMES  254 (350)
T ss_pred             EEEEeHHHHHHHHHHHhcC
Confidence            6788999999999998854

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.35  E-value=7.8e-11  Score=112.99  Aligned_cols=201  Identities=15%  Similarity=0.126  Sum_probs=124.2

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEE
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMY   94 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv   94 (272)
                      .+++|||||+|.||+++++.|.++|++|..                     ...|++|.+.+++.+...     ++|+||
T Consensus       380 ~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~---------------------~~~~l~d~~~v~~~i~~~-----~pd~Vi  433 (668)
T PLN02260        380 SLKFLIYGRTGWIGGLLGKLCEKQGIAYEY---------------------GKGRLEDRSSLLADIRNV-----KPTHVF  433 (668)
T ss_pred             CceEEEECCCchHHHHHHHHHHhCCCeEEe---------------------eccccccHHHHHHHHHhh-----CCCEEE
Confidence            357999999999999999999999988731                     113678888887766653     699999


Q ss_pred             eCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccc-----------c-------
Q 024145           95 NNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEI-----------A-------  156 (272)
Q Consensus        95 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~-----------~-------  156 (272)
                      |+|+.....   -.+..+++....+++|+.++..+++++...    + .+++++||.....           +       
T Consensus       434 h~Aa~~~~~---~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~----g-~~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~  505 (668)
T PLN02260        434 NAAGVTGRP---NVDWCESHKVETIRANVVGTLTLADVCREN----G-LLMMNFATGCIFEYDAKHPEGSGIGFKEEDKP  505 (668)
T ss_pred             ECCcccCCC---CCChHHhCHHHHHHHHhHHHHHHHHHHHHc----C-CeEEEEcccceecCCcccccccCCCCCcCCCC
Confidence            999976431   112334566788999999999999988763    2 2355665532110           1       


Q ss_pred             CCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcC--CCCCCCCChHhHHHH
Q 024145          157 GLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMG--NLKGEFLKTDGIANA  234 (272)
Q Consensus       157 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~dva~~  234 (272)
                      .+....|+.||.+.|.+++.+...   ..+++..+..+....+        ..++...+....  ..+......++++.+
T Consensus       506 ~~~~~~Yg~sK~~~E~~~~~~~~~---~~~r~~~~~~~~~~~~--------~nfv~~~~~~~~~~~vp~~~~~~~~~~~~  574 (668)
T PLN02260        506 NFTGSFYSKTKAMVEELLREYDNV---CTLRVRMPISSDLSNP--------RNFITKISRYNKVVNIPNSMTVLDELLPI  574 (668)
T ss_pred             CCCCChhhHHHHHHHHHHHhhhhh---eEEEEEEecccCCCCc--------cHHHHHHhccceeeccCCCceehhhHHHH
Confidence            112257999999999999876422   3455544432211110        112222221111  111223445666666


Q ss_pred             HHHHhcCCCCCccccEEEecCceeeccCcc
Q 024145          235 ALYLASDESSYVSGQNLVVDGGFSVVNPTV  264 (272)
Q Consensus       235 ~~~l~s~~~~~~~G~~i~~dgG~~~~~~~~  264 (272)
                      ++.++...    .|.+|++.++..++.-.+
T Consensus       575 ~~~l~~~~----~~giyni~~~~~~s~~e~  600 (668)
T PLN02260        575 SIEMAKRN----LRGIWNFTNPGVVSHNEI  600 (668)
T ss_pred             HHHHHHhC----CCceEEecCCCcCcHHHH
Confidence            66666431    256888888776554443

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.33  E-value=4.6e-11  Score=109.43  Aligned_cols=162  Identities=19%  Similarity=0.215  Sum_probs=117.6

Q ss_pred             CcEEE----EeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           15 GKVAI----ITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        15 ~k~vl----ItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      |..+|    |+||++|+|.++++.|...|++|+.+.+.+...                +.              ....++
T Consensus        34 ~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~----------------~~--------------~~~~~~   83 (450)
T PRK08261         34 GQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTW----------------AA--------------GWGDRF   83 (450)
T ss_pred             CCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCcccccc----------------cc--------------CcCCcc
Confidence            34556    888899999999999999999999876644311                00              001145


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHH
Q 024145           91 DIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGI  170 (272)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~  170 (272)
                      +.+++.+-..         .+.+++.        +.+.+++.+++.|.  ..|+||+++|..+..   ....|+++|+++
T Consensus        84 ~~~~~d~~~~---------~~~~~l~--------~~~~~~~~~l~~l~--~~griv~i~s~~~~~---~~~~~~~akaal  141 (450)
T PRK08261         84 GALVFDATGI---------TDPADLK--------ALYEFFHPVLRSLA--PCGRVVVLGRPPEAA---ADPAAAAAQRAL  141 (450)
T ss_pred             cEEEEECCCC---------CCHHHHH--------HHHHHHHHHHHhcc--CCCEEEEEccccccC---CchHHHHHHHHH
Confidence            5444332211         1122322        33456677777774  458999999976643   345799999999


Q ss_pred             HHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccccE
Q 024145          171 LGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQN  250 (272)
Q Consensus       171 ~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~  250 (272)
                      .+++++++.|+ +++++++.|.|++                              ..+++++.++.|+++..+.+++|+.
T Consensus       142 ~gl~rsla~E~-~~gi~v~~i~~~~------------------------------~~~~~~~~~~~~l~s~~~a~~~g~~  190 (450)
T PRK08261        142 EGFTRSLGKEL-RRGATAQLVYVAP------------------------------GAEAGLESTLRFFLSPRSAYVSGQV  190 (450)
T ss_pred             HHHHHHHHHHh-hcCCEEEEEecCC------------------------------CCHHHHHHHHHHhcCCccCCccCcE
Confidence            99999999999 7799999998853                              3578888899999999999999999


Q ss_pred             EEecCceee
Q 024145          251 LVVDGGFSV  259 (272)
Q Consensus       251 i~~dgG~~~  259 (272)
                      +.++++...
T Consensus       191 i~~~~~~~~  199 (450)
T PRK08261        191 VRVGAADAA  199 (450)
T ss_pred             EEecCCccc
Confidence            999998753

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.33  E-value=2.6e-11  Score=100.62  Aligned_cols=212  Identities=18%  Similarity=0.150  Sum_probs=146.1

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHH-HH---H-H--HhCCceEEEEecCCCHHHHHHHHHHHHHH
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGE-DL---A-D--KLGQDVCYIHCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~-~~---~-~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (272)
                      .+|++||||-||.=|.-+++.|+++|+.|..+.|+..... ..   . .  .-+.+++.+.+|++|..++.++++.+   
T Consensus         1 ~~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v---   77 (345)
T COG1089           1 MGKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEV---   77 (345)
T ss_pred             CCceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhc---
Confidence            3689999999999999999999999999999887643321 11   0 1  11345889999999999999999887   


Q ss_pred             hCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccc--cc---------c
Q 024145           87 FGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASAC--TE---------I  155 (272)
Q Consensus        87 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~--~~---------~  155 (272)
                        .+|-+.|.+++++      ...+.++.....+++..|+..+++++.-+-  .+.-|+..-||.-  |.         .
T Consensus        78 --~PdEIYNLaAQS~------V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~--~~~~rfYQAStSE~fG~v~~~pq~E~T  147 (345)
T COG1089          78 --QPDEIYNLAAQSH------VGVSFEQPEYTADVDAIGTLRLLEAIRILG--EKKTRFYQASTSELYGLVQEIPQKETT  147 (345)
T ss_pred             --Cchhheecccccc------ccccccCcceeeeechhHHHHHHHHHHHhC--CcccEEEecccHHhhcCcccCccccCC
Confidence              7999999998654      456788888899999999999999775543  2345555555532  21         2


Q ss_pred             cCCCCchhhhhHHHHHHHHHHHHHHhc---CCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhc------CC--CCCC
Q 024145          156 AGLGSPAYTISKYGILGLVKCLAAELG---QYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQM------GN--LKGE  224 (272)
Q Consensus       156 ~~~~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~------~~--~~~~  224 (272)
                      |+.+.++|+++|.....++..+...|+   -.||-+|.=+|.==+|=..++   -.....+.....      ++  -.+.
T Consensus       148 PFyPrSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRK---It~ava~Ik~G~q~~l~lGNldAkRD  224 (345)
T COG1089         148 PFYPRSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPLRGETFVTRK---ITRAVARIKLGLQDKLYLGNLDAKRD  224 (345)
T ss_pred             CCCCCCHHHHHHHHHHheeeehHhhcCceeecceeecCCCCCCccceehHH---HHHHHHHHHccccceEEecccccccc
Confidence            345667999999998888888877654   346777766663211111111   111111211111      11  1377


Q ss_pred             CCChHhHHHHHHHHhcC
Q 024145          225 FLKTDGIANAALYLASD  241 (272)
Q Consensus       225 ~~~~~dva~~~~~l~s~  241 (272)
                      |+...|.++++..++..
T Consensus       225 WG~A~DYVe~mwlmLQq  241 (345)
T COG1089         225 WGHAKDYVEAMWLMLQQ  241 (345)
T ss_pred             ccchHHHHHHHHHHHcc
Confidence            88999999998877754

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.31  E-value=5.1e-10  Score=89.33  Aligned_cols=169  Identities=11%  Similarity=0.103  Sum_probs=115.4

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh--CCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEE
Q 024145           17 VAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL--GQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMY   94 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv   94 (272)
                      +++||||+ |+|.++++.|+++|++|++++|+++..+.+...+  ...+.++.+|++|+++++++++.+.++++++|++|
T Consensus         2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~lv   80 (177)
T PRK08309          2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLAV   80 (177)
T ss_pred             EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEEE
Confidence            68999998 6777799999999999999999877766655544  34688899999999999999999999899999999


Q ss_pred             eCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHHHHHH
Q 024145           95 NNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLV  174 (272)
Q Consensus        95 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~~  174 (272)
                      +..=...                        +-.+.+++...-.+.+.-+++.+-...+..+                  
T Consensus        81 ~~vh~~~------------------------~~~~~~~~~~~gv~~~~~~~~h~~gs~~~~~------------------  118 (177)
T PRK08309         81 AWIHSSA------------------------KDALSVVCRELDGSSETYRLFHVLGSAASDP------------------  118 (177)
T ss_pred             Eeccccc------------------------hhhHHHHHHHHccCCCCceEEEEeCCcCCch------------------
Confidence            8764321                        2233333333333333346776633222111                  


Q ss_pred             HHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcC-CCCCcccc
Q 024145          175 KCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASD-ESSYVSGQ  249 (272)
Q Consensus       175 ~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~-~~~~~~G~  249 (272)
                      +.-...+...+....-|..|++.++-.                     .|+.+-+|+++.++.-+.. ...++.|+
T Consensus       119 ~~~~~~~~~~~~~~~~i~lgf~~~~~~---------------------~rwlt~~ei~~gv~~~~~~~~~~~~~g~  173 (177)
T PRK08309        119 RIPSEKIGPARCSYRRVILGFVLEDTY---------------------SRWLTHEEISDGVIKAIESDADEHVVGT  173 (177)
T ss_pred             hhhhhhhhhcCCceEEEEEeEEEeCCc---------------------cccCchHHHHHHHHHHHhcCCCeEEEEE
Confidence            111122333456777788888864321                     6889999999999987744 34445554

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.30  E-value=1.3e-10  Score=108.60  Aligned_cols=220  Identities=13%  Similarity=0.069  Sum_probs=137.8

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCC---eEEEeecCcch--HHHHH-HHh---------------------CCceEE
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGA---KVVIADVQDKL--GEDLA-DKL---------------------GQDVCY   65 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~---~V~~~~r~~~~--~~~~~-~~~---------------------~~~~~~   65 (272)
                      ++||+++||||||+||..++++|++.+.   +|++..|....  .++.. +++                     ..++..
T Consensus       117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~  196 (605)
T PLN02503        117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVP  196 (605)
T ss_pred             hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEE
Confidence            5889999999999999999999998753   67888775432  11111 111                     236889


Q ss_pred             EEecCCCH------HHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcC
Q 024145           66 IHCDISNE------DEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVP  139 (272)
Q Consensus        66 ~~~D~~~~------~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~  139 (272)
                      +..|++++      ++.+.+.+       .+|+|||+|+....         .+.++..+++|+.++..+++.+...-  
T Consensus       197 v~GDl~d~~LGLs~~~~~~L~~-------~vDiVIH~AA~v~f---------~~~~~~a~~vNV~GT~nLLelA~~~~--  258 (605)
T PLN02503        197 VVGNVCESNLGLEPDLADEIAK-------EVDVIINSAANTTF---------DERYDVAIDINTRGPCHLMSFAKKCK--  258 (605)
T ss_pred             EEeeCCCcccCCCHHHHHHHHh-------cCCEEEECcccccc---------ccCHHHHHHHHHHHHHHHHHHHHHcC--
Confidence            99999987      33333332       58999999986532         13467789999999999999876531  


Q ss_pred             CCCceEEEEecccccc---------cCC----------------------------------------------------
Q 024145          140 QQKGCILFTASACTEI---------AGL----------------------------------------------------  158 (272)
Q Consensus       140 ~~~g~iv~iss~~~~~---------~~~----------------------------------------------------  158 (272)
                       .-.++|++||.....         .++                                                    
T Consensus       259 -~lk~fV~vSTayVyG~~~G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g  337 (605)
T PLN02503        259 -KLKLFLQVSTAYVNGQRQGRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLG  337 (605)
T ss_pred             -CCCeEEEccCceeecCCCCeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcc
Confidence             224588888864211         111                                                    


Q ss_pred             --------CCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCC----CC---ChhHHHHHHhhc-----
Q 024145          159 --------GSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKG----GV---DPALIESSMSQM-----  218 (272)
Q Consensus       159 --------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~----~~---~~~~~~~~~~~~-----  218 (272)
                              ....|.-+|+-.|.+++...     .++.+.+++|+.|.+.+....    ..   ............     
T Consensus       338 ~~~~~~~~~pNtYt~TK~lAE~lV~~~~-----~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~g~G~lr~~~  412 (605)
T PLN02503        338 LERAKLYGWQDTYVFTKAMGEMVINSMR-----GDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKGQLTGFL  412 (605)
T ss_pred             cchhhhCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEcCCEecccccCCccccccCccccchhhhheeccceeEEE
Confidence                    01358888888888876332     369999999998855322210    00   000000000000     


Q ss_pred             --CCCCCCCCChHhHHHHHHHHhcC-C-CCCccccEEEecCc
Q 024145          219 --GNLKGEFLKTDGIANAALYLASD-E-SSYVSGQNLVVDGG  256 (272)
Q Consensus       219 --~~~~~~~~~~~dva~~~~~l~s~-~-~~~~~G~~i~~dgG  256 (272)
                        ......+..+|.++++++.++.. . .....+++|++..+
T Consensus       413 ~~~~~~~DiVPVD~vvna~i~a~a~~~~~~~~~~~vYn~ts~  454 (605)
T PLN02503        413 ADPNGVLDVVPADMVVNATLAAMAKHGGAAKPEINVYQIASS  454 (605)
T ss_pred             eCCCeeEeEEeecHHHHHHHHHHHhhhcccCCCCCEEEeCCC
Confidence              01113457789999998877321 1 11235789998766

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=99.26  E-value=2.5e-11  Score=100.82  Aligned_cols=102  Identities=18%  Similarity=0.190  Sum_probs=79.3

Q ss_pred             cEEEEeCC-CChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEE
Q 024145           16 KVAIITGG-ASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMY   94 (272)
Q Consensus        16 k~vlItGa-s~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv   94 (272)
                      .+=.||.. |||||++++++|+++|++|+++++... .    ...    ....+|+++.++++.+++++.+.++++|++|
T Consensus        15 ~VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~-l----~~~----~~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLV   85 (227)
T TIGR02114        15 SVRSITNHSTGHLGKIITETFLSAGHEVTLVTTKRA-L----KPE----PHPNLSIREIETTKDLLITLKELVQEHDILI   85 (227)
T ss_pred             CceeecCCcccHHHHHHHHHHHHCCCEEEEEcChhh-c----ccc----cCCcceeecHHHHHHHHHHHHHHcCCCCEEE
Confidence            45566755 789999999999999999999876321 1    110    1245899999999999999999999999999


Q ss_pred             eCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHH
Q 024145           95 NNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAK  131 (272)
Q Consensus        95 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  131 (272)
                      ||||+...  .++.+.+.++|++++..   +.+.+.+
T Consensus        86 nnAgv~d~--~~~~~~s~e~~~~~~~~---~~~~~~~  117 (227)
T TIGR02114        86 HSMAVSDY--TPVYMTDLEQVQASDNL---NEFLSKQ  117 (227)
T ss_pred             ECCEeccc--cchhhCCHHHHhhhcch---hhhhccc
Confidence            99998654  67888999999987554   5555554

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.18  E-value=6.9e-10  Score=92.17  Aligned_cols=198  Identities=18%  Similarity=0.138  Sum_probs=116.1

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCC
Q 024145           18 AIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNA   97 (272)
Q Consensus        18 vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~a   97 (272)
                      ++||||||.||++++.+|.+.|++|+++.|++...+...   ...+       ...+.+    ++..+  .++|++||.|
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~---~~~v-------~~~~~~----~~~~~--~~~DavINLA   64 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNL---HPNV-------TLWEGL----ADALT--LGIDAVINLA   64 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhc---Cccc-------cccchh----hhccc--CCCCEEEECC
Confidence            589999999999999999999999999999887643221   1111       111111    11111  1699999999


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCC-CCceEEEEecccccccCCCCchhhhh----HHHHHH
Q 024145           98 GILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQ-QKGCILFTASACTEIAGLGSPAYTIS----KYGILG  172 (272)
Q Consensus        98 g~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~iss~~~~~~~~~~~~Y~~s----K~a~~~  172 (272)
                      |..-.    -...+.+.=++.++    +-+..++.+.....+. .++++..-+|..|+++......|.-.    .-.+..
T Consensus        65 G~~I~----~rrWt~~~K~~i~~----SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~Fla~  136 (297)
T COG1090          65 GEPIA----ERRWTEKQKEEIRQ----SRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPGDDFLAQ  136 (297)
T ss_pred             CCccc----cccCCHHHHHHHHH----HHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCCCChHHH
Confidence            96432    11145555555555    4455555555555433 45656666677787776544444322    223444


Q ss_pred             HHHHHHHHh---cCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhc------CCCCCCCCChHhHHHHHHHHhcCC
Q 024145          173 LVKCLAAEL---GQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQM------GNLKGEFLKTDGIANAALYLASDE  242 (272)
Q Consensus       173 ~~~~la~e~---~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~dva~~~~~l~s~~  242 (272)
                      +|+.+-.+.   ...|+||..++-|.|-++--.   .....+.......      +...-.|+..||.+++++|++.++
T Consensus       137 lc~~WE~~a~~a~~~gtRvvllRtGvVLs~~GG---aL~~m~~~fk~glGG~~GsGrQ~~SWIhieD~v~~I~fll~~~  212 (297)
T COG1090         137 LCQDWEEEALQAQQLGTRVVLLRTGVVLSPDGG---ALGKMLPLFKLGLGGKLGSGRQWFSWIHIEDLVNAILFLLENE  212 (297)
T ss_pred             HHHHHHHHHhhhhhcCceEEEEEEEEEecCCCc---chhhhcchhhhccCCccCCCCceeeeeeHHHHHHHHHHHHhCc
Confidence            455444332   345899999999988764221   1111100000011      111134678999999999999763

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=99.04  E-value=2.9e-08  Score=90.39  Aligned_cols=239  Identities=18%  Similarity=0.130  Sum_probs=152.3

Q ss_pred             CCCCCcEEEEeCCC-ChHHHHHHHHHHHcCCeEEEeec-CcchHHHHHHHh-------CCceEEEEecCCCHHHHHHHHH
Q 024145           11 KRLEGKVAIITGGA-SGIGAMAVELFHENGAKVVIADV-QDKLGEDLADKL-------GQDVCYIHCDISNEDEVINLVD   81 (272)
Q Consensus        11 ~~l~~k~vlItGas-~giG~aia~~la~~G~~V~~~~r-~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~   81 (272)
                      ....+|++|||||+ +.||.+++.+|++.|++|+++.. -.+...++.+.+       +..+.++.+++.+..+++++++
T Consensus       392 ~~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIe  471 (866)
T COG4982         392 GTYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIE  471 (866)
T ss_pred             CCcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHH
Confidence            44688999999998 58999999999999999988754 334444555554       4568888999999999999999


Q ss_pred             HHHHHhC--------------CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCC---CCce
Q 024145           82 TAVSKFG--------------KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQ---QKGC  144 (272)
Q Consensus        82 ~~~~~~g--------------~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~~g~  144 (272)
                      .|-.+..              .+|.+|-.|+....  +.+.+..... +-.+++-+++...++-.+.+.-..+   .+-+
T Consensus       472 wIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~--G~l~~agsra-E~~~rilLw~V~Rliggl~~~~s~r~v~~R~h  548 (866)
T COG4982         472 WIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVS--GELADAGSRA-EFAMRILLWNVLRLIGGLKKQGSSRGVDTRLH  548 (866)
T ss_pred             HhccccccccCCcceecccccCcceeeecccCCcc--CccccCCchH-HHHHHHHHHHHHHHHHHhhhhccccCcccceE
Confidence            9876321              36788888875443  5555544322 2233444444444444443333222   1234


Q ss_pred             EEEEeccc-ccccCCCCchhhhhHHHHHHHHHHHHHHhc-CCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCC
Q 024145          145 ILFTASAC-TEIAGLGSPAYTISKYGILGLVKCLAAELG-QYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLK  222 (272)
Q Consensus       145 iv~iss~~-~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  222 (272)
                      ||.-.|.. |.  +.+-..|+-||++++.+..-+..|-+ ..-+++..-.-||++.....   ...+.+.....+.+   
T Consensus       549 VVLPgSPNrG~--FGgDGaYgEsK~aldav~~RW~sEs~Wa~~vsl~~A~IGWtrGTGLM---g~Ndiiv~aiEk~G---  620 (866)
T COG4982         549 VVLPGSPNRGM--FGGDGAYGESKLALDAVVNRWHSESSWAARVSLAHALIGWTRGTGLM---GHNDIIVAAIEKAG---  620 (866)
T ss_pred             EEecCCCCCCc--cCCCcchhhHHHHHHHHHHHhhccchhhHHHHHhhhheeeecccccc---CCcchhHHHHHHhC---
Confidence            45444432 22  23456899999999999777766631 11245555566888876654   23333333333433   


Q ss_pred             CCCCChHhHHHHHHHHhcCCCCC---ccccEEEecCceeec
Q 024145          223 GEFLKTDGIANAALYLASDESSY---VSGQNLVVDGGFSVV  260 (272)
Q Consensus       223 ~~~~~~~dva~~~~~l~s~~~~~---~~G~~i~~dgG~~~~  260 (272)
                      -+-.+++|++..++-||+.+...   -+--...+.||+...
T Consensus       621 V~tyS~~EmA~~LLgL~saev~e~a~~~PI~aDLtGGL~~~  661 (866)
T COG4982         621 VRTYSTDEMAFNLLGLASAEVVELAASSPITADLTGGLGEV  661 (866)
T ss_pred             ceecCHHHHHHHHHhhccHHHHHHHhcCCeEeeccCccccc
Confidence            35568999999999999754211   122345677887765

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=99.04  E-value=7.4e-10  Score=92.48  Aligned_cols=207  Identities=12%  Similarity=0.054  Sum_probs=121.0

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchH-HHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEeC
Q 024145           18 AIITGGASGIGAMAVELFHENGAKVVIADVQDKLG-EDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNN   96 (272)
Q Consensus        18 vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~   96 (272)
                      ++|+||+|.+|+.++++|++.+++|.+..|+.... ....+.  ..+.++..|..|++++.+++.       ++|.+|++
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~--~g~~vv~~d~~~~~~l~~al~-------g~d~v~~~   71 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQA--LGAEVVEADYDDPESLVAALK-------GVDAVFSV   71 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHH--TTTEEEES-TT-HHHHHHHHT-------TCSEEEEE
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhc--ccceEeecccCCHHHHHHHHc-------CCceEEee
Confidence            68999999999999999999999999999987432 122233  345678999999999887777       89999998


Q ss_pred             CCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccccccc-C-CCC--chhhhhHHHHHH
Q 024145           97 AGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIA-G-LGS--PAYTISKYGILG  172 (272)
Q Consensus        97 ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~-~-~~~--~~Y~~sK~a~~~  172 (272)
                      .+....       ...+           ....+++++...-.    .++|+ ||...... . ...  ..+-..|..++.
T Consensus        72 ~~~~~~-------~~~~-----------~~~~li~Aa~~agV----k~~v~-ss~~~~~~~~~~~~p~~~~~~~k~~ie~  128 (233)
T PF05368_consen   72 TPPSHP-------SELE-----------QQKNLIDAAKAAGV----KHFVP-SSFGADYDESSGSEPEIPHFDQKAEIEE  128 (233)
T ss_dssp             SSCSCC-------CHHH-----------HHHHHHHHHHHHT-----SEEEE-SEESSGTTTTTTSTTHHHHHHHHHHHHH
T ss_pred             cCcchh-------hhhh-----------hhhhHHHhhhcccc----ceEEE-EEecccccccccccccchhhhhhhhhhh
Confidence            875421       1111           12344555554333    34664 44433221 1 111  123345666655


Q ss_pred             HHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCC--ChhHHHHHHhhcCCC--CCCCC-ChHhHHHHHHHHhcCCCCCcc
Q 024145          173 LVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGV--DPALIESSMSQMGNL--KGEFL-KTDGIANAALYLASDESSYVS  247 (272)
Q Consensus       173 ~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~--~~~~~~~~~~~~~~~--~~~~~-~~~dva~~~~~l~s~~~~~~~  247 (272)
                      +.+..       ++....|+||+...........  ..........-..+.  ...+. +.+|+++.+..++.+...+-+
T Consensus       129 ~l~~~-------~i~~t~i~~g~f~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~~~~  201 (233)
T PF05368_consen  129 YLRES-------GIPYTIIRPGFFMENLLPPFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEKHNN  201 (233)
T ss_dssp             HHHHC-------TSEBEEEEE-EEHHHHHTTTHHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGGTTE
T ss_pred             hhhhc-------cccceeccccchhhhhhhhhcccccccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHHhcC
Confidence            44333       8999999999766544321000  000000000000111  12343 789999999999988666557


Q ss_pred             ccEEEecCceeeccCcc
Q 024145          248 GQNLVVDGGFSVVNPTV  264 (272)
Q Consensus       248 G~~i~~dgG~~~~~~~~  264 (272)
                      |+.+.+.| ..++...+
T Consensus       202 ~~~~~~~~-~~~t~~ei  217 (233)
T PF05368_consen  202 GKTIFLAG-ETLTYNEI  217 (233)
T ss_dssp             EEEEEEGG-GEEEHHHH
T ss_pred             CEEEEeCC-CCCCHHHH
Confidence            88888866 44443333

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=98.90  E-value=5.2e-08  Score=78.66  Aligned_cols=204  Identities=18%  Similarity=0.177  Sum_probs=131.3

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCC---eEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Q 024145           16 KVAIITGGASGIGAMAVELFHENGA---KVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDI   92 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   92 (272)
                      |+++|||++|=+|+||.+.+...|.   +.++...                  -.+|+++.++++++++..     ++-+
T Consensus         2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~s------------------kd~DLt~~a~t~~lF~~e-----kPth   58 (315)
T KOG1431|consen    2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGS------------------KDADLTNLADTRALFESE-----KPTH   58 (315)
T ss_pred             ceEEEecCCchHHHHHHHHHHhcCCCCcceEEecc------------------ccccccchHHHHHHHhcc-----CCce
Confidence            6899999999999999999998875   2333221                  126999999999999865     6889


Q ss_pred             EEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccc----------------c
Q 024145           93 MYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEI----------------A  156 (272)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~----------------~  156 (272)
                      +||.|+...   +.+...+.  -.+.+..|+.-.-++++.+..+-.++    ++++.|.+-.-                +
T Consensus        59 VIhlAAmVG---Glf~N~~y--nldF~r~Nl~indNVlhsa~e~gv~K----~vsclStCIfPdkt~yPIdEtmvh~gpp  129 (315)
T KOG1431|consen   59 VIHLAAMVG---GLFHNNTY--NLDFIRKNLQINDNVLHSAHEHGVKK----VVSCLSTCIFPDKTSYPIDETMVHNGPP  129 (315)
T ss_pred             eeehHhhhc---chhhcCCC--chHHHhhcceechhHHHHHHHhchhh----hhhhcceeecCCCCCCCCCHHHhccCCC
Confidence            999998654   23333322  12334444444445556666654443    66666654321                2


Q ss_pred             CCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCC----CCChhHHHHHHhhc------------CC
Q 024145          157 GLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKG----GVDPALIESSMSQM------------GN  220 (272)
Q Consensus       157 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~----~~~~~~~~~~~~~~------------~~  220 (272)
                      .+....|+.+|.-+.-..+.+..++   |-...++.|-.+..|--..-    -..+..+.+.....            +.
T Consensus       130 hpsN~gYsyAKr~idv~n~aY~~qh---g~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~  206 (315)
T KOG1431|consen  130 HPSNFGYSYAKRMIDVQNQAYRQQH---GRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGS  206 (315)
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHh---CCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCC
Confidence            3455689999987777778888885   55666677766666543321    12233444432211            22


Q ss_pred             CCCCCCChHhHHHHHHHHhcCCCCCccccEEEecCce
Q 024145          221 LKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGF  257 (272)
Q Consensus       221 ~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~  257 (272)
                      +.+.|...+|.|++++|++.+-..   =+.|.++-|.
T Consensus       207 PlRqFiys~DLA~l~i~vlr~Y~~---vEpiils~ge  240 (315)
T KOG1431|consen  207 PLRQFIYSDDLADLFIWVLREYEG---VEPIILSVGE  240 (315)
T ss_pred             hHHHHhhHhHHHHHHHHHHHhhcC---ccceEeccCc
Confidence            337789999999999999976432   3567776665

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.87  E-value=1.4e-08  Score=90.86  Aligned_cols=81  Identities=23%  Similarity=0.303  Sum_probs=63.9

Q ss_pred             CCCCCcEEEEeCC----------------CChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHH
Q 024145           11 KRLEGKVAIITGG----------------ASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNED   74 (272)
Q Consensus        11 ~~l~~k~vlItGa----------------s~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~   74 (272)
                      .+++||++|||||                ||++|.+++++|+++|++|++++++... +     ...  ....+|+++.+
T Consensus       184 ~~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~~-~-----~~~--~~~~~dv~~~~  255 (399)
T PRK05579        184 KDLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVNL-P-----TPA--GVKRIDVESAQ  255 (399)
T ss_pred             cccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCccc-c-----CCC--CcEEEccCCHH
Confidence            4689999999999                5569999999999999999999886531 1     111  23567999988


Q ss_pred             HHHHHHHHHHHHhCCccEEEeCCCCCCC
Q 024145           75 EVINLVDTAVSKFGKLDIMYNNAGILDR  102 (272)
Q Consensus        75 ~~~~~~~~~~~~~g~id~lv~~ag~~~~  102 (272)
                      ++.+.+.   +.++++|++|||||+...
T Consensus       256 ~~~~~v~---~~~~~~DilI~~Aav~d~  280 (399)
T PRK05579        256 EMLDAVL---AALPQADIFIMAAAVADY  280 (399)
T ss_pred             HHHHHHH---HhcCCCCEEEEccccccc
Confidence            8766554   557889999999998755

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=98.86  E-value=1.1e-07  Score=79.35  Aligned_cols=213  Identities=16%  Similarity=0.113  Sum_probs=138.9

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhC--CceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLG--QDVCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      .++.|-++-|.||||++|+-++++|++.|-+|++-.|-.+..-.-.+-.|  +++.+...|+.|++|++++++       
T Consensus        57 sS~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk-------  129 (391)
T KOG2865|consen   57 SSVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRDEDSIRAVVK-------  129 (391)
T ss_pred             ccccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeecccccceeeeccCCCCHHHHHHHHH-------
Confidence            45677889999999999999999999999999998886554322222222  478999999999999999888       


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHH
Q 024145           89 KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKY  168 (272)
Q Consensus        89 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~  168 (272)
                      .-+++||..|.-..    ....+.      .++|+.++-.+.+.+...    +--++|.+|+..+.  ..+.+-|--||+
T Consensus       130 ~sNVVINLIGrd~e----Tknf~f------~Dvn~~~aerlAricke~----GVerfIhvS~Lgan--v~s~Sr~LrsK~  193 (391)
T KOG2865|consen  130 HSNVVINLIGRDYE----TKNFSF------EDVNVHIAERLARICKEA----GVERFIHVSCLGAN--VKSPSRMLRSKA  193 (391)
T ss_pred             hCcEEEEeeccccc----cCCccc------ccccchHHHHHHHHHHhh----Chhheeehhhcccc--ccChHHHHHhhh
Confidence            56999999985332    112222      346777777777666543    33459999998755  344456778888


Q ss_pred             HHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhc--CCCC--C-----CCCChHhHHHHHHHHh
Q 024145          169 GILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQM--GNLK--G-----EFLKTDGIANAALYLA  239 (272)
Q Consensus       169 a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~--~~~~--~-----~~~~~~dva~~~~~l~  239 (272)
                      +.|-.++.   ++.    ...+|.|.-+...--+   -... ....+++.  .++.  |     .-..+-|||.+|+-.+
T Consensus       194 ~gE~aVrd---afP----eAtIirPa~iyG~eDr---fln~-ya~~~rk~~~~pL~~~GekT~K~PVyV~DVaa~IvnAv  262 (391)
T KOG2865|consen  194 AGEEAVRD---AFP----EATIIRPADIYGTEDR---FLNY-YASFWRKFGFLPLIGKGEKTVKQPVYVVDVAAAIVNAV  262 (391)
T ss_pred             hhHHHHHh---hCC----cceeechhhhcccchh---HHHH-HHHHHHhcCceeeecCCcceeeccEEEehHHHHHHHhc
Confidence            87765543   332    2467888666543221   0011 11111112  1221  1     1235689999999888


Q ss_pred             cCCCCCccccEEEecCceee
Q 024145          240 SDESSYVSGQNLVVDGGFSV  259 (272)
Q Consensus       240 s~~~~~~~G~~i~~dgG~~~  259 (272)
                      -++++  .|.++..-|=-..
T Consensus       263 kDp~s--~Gktye~vGP~~y  280 (391)
T KOG2865|consen  263 KDPDS--MGKTYEFVGPDRY  280 (391)
T ss_pred             cCccc--cCceeeecCCchh
Confidence            76654  7888877664333

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.85  E-value=1.5e-07  Score=80.13  Aligned_cols=198  Identities=15%  Similarity=0.111  Sum_probs=125.7

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEe
Q 024145           16 KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYN   95 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~   95 (272)
                      +++|||||||.+|++++++|.++|++|.+..|+++......    ..+.+...|+.++.++...+.       ++|.+++
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~----~~v~~~~~d~~~~~~l~~a~~-------G~~~~~~   69 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA----GGVEVVLGDLRDPKSLVAGAK-------GVDGVLL   69 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc----CCcEEEEeccCCHhHHHHHhc-------cccEEEE
Confidence            36899999999999999999999999999999988766554    678999999999999887776       7898888


Q ss_pred             CCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHHHHHHH
Q 024145           96 NAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVK  175 (272)
Q Consensus        96 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~~~  175 (272)
                      ..+....  ..          ..............+++.     .+..+++.+|+..+..  .....|..+|...+...+
T Consensus        70 i~~~~~~--~~----------~~~~~~~~~~~~~a~~a~-----~~~~~~~~~s~~~~~~--~~~~~~~~~~~~~e~~l~  130 (275)
T COG0702          70 ISGLLDG--SD----------AFRAVQVTAVVRAAEAAG-----AGVKHGVSLSVLGADA--ASPSALARAKAAVEAALR  130 (275)
T ss_pred             Eeccccc--cc----------chhHHHHHHHHHHHHHhc-----CCceEEEEeccCCCCC--CCccHHHHHHHHHHHHHH
Confidence            8775421  10          011122223333333332     1234466666655443  344689999998887555


Q ss_pred             HHHHHhcCCCcEEEEEeC-CcccCCcccCCCCChhHHHHHHhhcC---CC---CCCCCChHhHHHHHHHHhcCCCCCccc
Q 024145          176 CLAAELGQYGIRVNCVSP-YGLATGMSMKGGVDPALIESSMSQMG---NL---KGEFLKTDGIANAALYLASDESSYVSG  248 (272)
Q Consensus       176 ~la~e~~~~gi~v~~i~P-g~v~t~~~~~~~~~~~~~~~~~~~~~---~~---~~~~~~~~dva~~~~~l~s~~~~~~~G  248 (272)
                      +.       |+.-..+.| +++......       ..........   +.   .-.....+|++..+...+..+.  ..|
T Consensus       131 ~s-------g~~~t~lr~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~i~~~d~a~~~~~~l~~~~--~~~  194 (275)
T COG0702         131 SS-------GIPYTTLRRAAFYLGAGAA-------FIEAAEAAGLPVIPRGIGRLSPIAVDDVAEALAAALDAPA--TAG  194 (275)
T ss_pred             hc-------CCCeEEEecCeeeeccchh-------HHHHHHhhCCceecCCCCceeeeEHHHHHHHHHHHhcCCc--ccC
Confidence            43       555455553 333321111       0111111110   01   1234677999998888776554  578


Q ss_pred             cEEEecCceee
Q 024145          249 QNLVVDGGFSV  259 (272)
Q Consensus       249 ~~i~~dgG~~~  259 (272)
                      +.+.+.|=...
T Consensus       195 ~~~~l~g~~~~  205 (275)
T COG0702         195 RTYELAGPEAL  205 (275)
T ss_pred             cEEEccCCcee
Confidence            88888776444

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=98.84  E-value=1.5e-08  Score=97.59  Aligned_cols=174  Identities=16%  Similarity=0.229  Sum_probs=138.1

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCe-EEEeecCcchHHHHH------HHhCCceEEEEecCCCHHHHHHHHHHHHHH
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAK-VVIADVQDKLGEDLA------DKLGQDVCYIHCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~-V~~~~r~~~~~~~~~------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (272)
                      ..|.++|+||-||.|..+++.|.++|++ +++++|+.-+..-..      +.-+-.+.+-..|++..+..+.++++.. +
T Consensus      1767 peksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s~-k 1845 (2376)
T KOG1202|consen 1767 PEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIEESN-K 1845 (2376)
T ss_pred             ccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHHHhh-h
Confidence            3589999999999999999999999997 788998765432111      2235567777789999999999888754 4


Q ss_pred             hCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhh
Q 024145           87 FGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTIS  166 (272)
Q Consensus        87 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~s  166 (272)
                      .+.+..+||.|.+...  +-+++.+++.|+.+-+..+.++.++-+....+..  .--.+|.+||.+.-.+..++..|+-+
T Consensus      1846 l~~vGGiFnLA~VLRD--~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~--~LdyFv~FSSvscGRGN~GQtNYG~a 1921 (2376)
T KOG1202|consen 1846 LGPVGGIFNLAAVLRD--GLIENQTPKNFKDVAKPKYSGTINLDRVSREICP--ELDYFVVFSSVSCGRGNAGQTNYGLA 1921 (2376)
T ss_pred             cccccchhhHHHHHHh--hhhcccChhHHHhhhccceeeeeehhhhhhhhCc--ccceEEEEEeecccCCCCcccccchh
Confidence            5789999999998776  8899999999999999999999998887665543  23468888898888889999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEEeCCcc
Q 024145          167 KYGILGLVKCLAAELGQYGIRVNCVSPYGL  196 (272)
Q Consensus       167 K~a~~~~~~~la~e~~~~gi~v~~i~Pg~v  196 (272)
                      +++++.++..-..+    |..-.+|.-|.+
T Consensus      1922 NS~MERiceqRr~~----GfPG~AiQWGAI 1947 (2376)
T KOG1202|consen 1922 NSAMERICEQRRHE----GFPGTAIQWGAI 1947 (2376)
T ss_pred             hHHHHHHHHHhhhc----CCCcceeeeecc
Confidence            99999999865444    444455566544

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=98.73  E-value=2e-07  Score=83.86  Aligned_cols=166  Identities=16%  Similarity=0.183  Sum_probs=114.1

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcC---CeEEEeecCcc--hHHHHHH---------Hh----C---CceEEEEecCC
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENG---AKVVIADVQDK--LGEDLAD---------KL----G---QDVCYIHCDIS   71 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G---~~V~~~~r~~~--~~~~~~~---------~~----~---~~~~~~~~D~~   71 (272)
                      ++||+++||||||++|+-+.+.|++.-   -++++.-|...  ..++..+         .+    +   .++..+..|++
T Consensus        10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~   89 (467)
T KOG1221|consen   10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDIS   89 (467)
T ss_pred             hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccccc
Confidence            689999999999999999999999863   25777666432  1221111         11    1   36788888887


Q ss_pred             CH------HHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceE
Q 024145           72 NE------DEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCI  145 (272)
Q Consensus        72 ~~------~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~i  145 (272)
                      ++      .+.+.+.+       .+|++||+|+....         .|.++..+.+|..|+..+++.+.....-   -.+
T Consensus        90 ~~~LGis~~D~~~l~~-------eV~ivih~AAtvrF---------de~l~~al~iNt~Gt~~~l~lak~~~~l---~~~  150 (467)
T KOG1221|consen   90 EPDLGISESDLRTLAD-------EVNIVIHSAATVRF---------DEPLDVALGINTRGTRNVLQLAKEMVKL---KAL  150 (467)
T ss_pred             CcccCCChHHHHHHHh-------cCCEEEEeeeeecc---------chhhhhhhhhhhHhHHHHHHHHHHhhhh---heE
Confidence            53      44443333       78999999997654         2567888999999999999987765532   347


Q ss_pred             EEEecccccc--------cCC--------------------------------CCchhhhhHHHHHHHHHHHHHHhcCCC
Q 024145          146 LFTASACTEI--------AGL--------------------------------GSPAYTISKYGILGLVKCLAAELGQYG  185 (272)
Q Consensus       146 v~iss~~~~~--------~~~--------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~g  185 (272)
                      +.+|......        +++                                ....|.-+|+-.|++...-+     .+
T Consensus       151 vhVSTAy~n~~~~~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~-----~~  225 (467)
T KOG1221|consen  151 VHVSTAYSNCNVGHIEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEA-----EN  225 (467)
T ss_pred             EEeehhheecccccccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhc-----cC
Confidence            7787765431        111                                12368888888877665443     35


Q ss_pred             cEEEEEeCCcccCCccc
Q 024145          186 IRVNCVSPYGLATGMSM  202 (272)
Q Consensus       186 i~v~~i~Pg~v~t~~~~  202 (272)
                      +.+..++|+.+.+....
T Consensus       226 lPivIiRPsiI~st~~E  242 (467)
T KOG1221|consen  226 LPLVIIRPSIITSTYKE  242 (467)
T ss_pred             CCeEEEcCCceeccccC
Confidence            78899999877765543

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.72  E-value=8.3e-08  Score=82.73  Aligned_cols=81  Identities=20%  Similarity=0.306  Sum_probs=63.3

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCe-EEEeecCc---chHHHHHHHhC---CceEEEEecCCCHHHHHHHHHHHH
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAK-VVIADVQD---KLGEDLADKLG---QDVCYIHCDISNEDEVINLVDTAV   84 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~-V~~~~r~~---~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~   84 (272)
                      ++++|+++|+|| ||+|++++.+|++.|++ |++++|+.   ++.+++.+++.   ..+.+..+|+.+.++++..++   
T Consensus       123 ~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~---  198 (289)
T PRK12548        123 DVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIA---  198 (289)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhc---
Confidence            468899999999 69999999999999986 99999986   56666666553   345566788888777655444   


Q ss_pred             HHhCCccEEEeCCCCC
Q 024145           85 SKFGKLDIMYNNAGIL  100 (272)
Q Consensus        85 ~~~g~id~lv~~ag~~  100 (272)
                          ..|+|||+....
T Consensus       199 ----~~DilINaTp~G  210 (289)
T PRK12548        199 ----SSDILVNATLVG  210 (289)
T ss_pred             ----cCCEEEEeCCCC
Confidence                569999988654

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.69  E-value=1.8e-07  Score=75.92  Aligned_cols=81  Identities=22%  Similarity=0.346  Sum_probs=66.1

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhC--CceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLG--QDVCYIHCDISNEDEVINLVDTAVSKFGK   89 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (272)
                      ++++++++|+||+|++|+++++.|++.|++|++++|+.++.+.+.+.+.  .......+|..+.+++.+.++       .
T Consensus        25 ~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-------~   97 (194)
T cd01078          25 DLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIK-------G   97 (194)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHh-------c
Confidence            6789999999999999999999999999999999999888777776653  134456678888888766664       5


Q ss_pred             ccEEEeCCCC
Q 024145           90 LDIMYNNAGI   99 (272)
Q Consensus        90 id~lv~~ag~   99 (272)
                      .|++|++...
T Consensus        98 ~diVi~at~~  107 (194)
T cd01078          98 ADVVFAAGAA  107 (194)
T ss_pred             CCEEEECCCC
Confidence            7998887653

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.63  E-value=1.9e-07  Score=77.69  Aligned_cols=100  Identities=17%  Similarity=0.224  Sum_probs=67.7

Q ss_pred             cEEEEeCCCC-hHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEE
Q 024145           16 KVAIITGGAS-GIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMY   94 (272)
Q Consensus        16 k~vlItGas~-giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv   94 (272)
                      .+=.||+.|+ +||++++++|+++|++|++++|+....    ......+.++.++  +.   +.+.+.+.+.++.+|++|
T Consensus        16 ~VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~----~~~~~~v~~i~v~--s~---~~m~~~l~~~~~~~DivI   86 (229)
T PRK06732         16 SVRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVK----PEPHPNLSIIEIE--NV---DDLLETLEPLVKDHDVLI   86 (229)
T ss_pred             CceeecCccchHHHHHHHHHHHhCCCEEEEEECccccc----CCCCCCeEEEEEe--cH---HHHHHHHHHHhcCCCEEE
Confidence            3667886655 599999999999999999998754311    0011345555542  22   223334444456799999


Q ss_pred             eCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHH
Q 024145           95 NNAGILDRSFGSILDTPKSDLERLINVNTIGG  126 (272)
Q Consensus        95 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~  126 (272)
                      ||||....  .+....+.+++.+++++|....
T Consensus        87 h~AAvsd~--~~~~~~~~~~~~~~~~v~~~~~  116 (229)
T PRK06732         87 HSMAVSDY--TPVYMTDLEEVSASDNLNEFLT  116 (229)
T ss_pred             eCCccCCc--eehhhhhhhhhhhhhhhhhhhc
Confidence            99998754  4566677888999988876654

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.63  E-value=6.9e-08  Score=86.15  Aligned_cols=114  Identities=18%  Similarity=0.198  Sum_probs=75.8

Q ss_pred             CCCCCcEEEEeCC---------------CCh-HHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHH
Q 024145           11 KRLEGKVAIITGG---------------ASG-IGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNED   74 (272)
Q Consensus        11 ~~l~~k~vlItGa---------------s~g-iG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~   74 (272)
                      .+++||++|||||               |+| +|.+++++|..+|++|+++.++....      .+.  ....+|+++.+
T Consensus       181 ~~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~------~~~--~~~~~~v~~~~  252 (390)
T TIGR00521       181 EDLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL------TPP--GVKSIKVSTAE  252 (390)
T ss_pred             cccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC------CCC--CcEEEEeccHH
Confidence            3589999999999               556 99999999999999999988654321      222  23568999999


Q ss_pred             HH-HHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHH
Q 024145           75 EV-INLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAAR  135 (272)
Q Consensus        75 ~~-~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  135 (272)
                      ++ ++++++   .++++|++|+|||+....+....+.........+.+|+...--+++.+..
T Consensus       253 ~~~~~~~~~---~~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~~  311 (390)
T TIGR00521       253 EMLEAALNE---LAKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVRK  311 (390)
T ss_pred             HHHHHHHHh---hcccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHHHh
Confidence            98 555533   34679999999999765221111111111112345666666666665554

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=98.61  E-value=8.1e-07  Score=78.81  Aligned_cols=173  Identities=14%  Similarity=0.148  Sum_probs=105.1

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHH-Hh-CCceEEEEecCCCHHHHH-HHHHHHHHHhC
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLAD-KL-GQDVCYIHCDISNEDEVI-NLVDTAVSKFG   88 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~-~~-~~~~~~~~~D~~~~~~~~-~~~~~~~~~~g   88 (272)
                      ..+-.+|+|+||+|++|+-+++.|.++|+.|.++.|+.+..+.+.. .. ......+..|.....+.. .++..+.   -
T Consensus        76 ~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~---~  152 (411)
T KOG1203|consen   76 SKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAVP---K  152 (411)
T ss_pred             CCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhcccccccccceeeeccccccchhhhhhhhcc---c
Confidence            3456799999999999999999999999999999999887776655 11 123444555555544432 2222210   1


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHH
Q 024145           89 KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKY  168 (272)
Q Consensus        89 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~  168 (272)
                      ...+++-++|.-..     .+    +...-..+-..+..++++++...-.    -++++++|+.+.........+..  .
T Consensus       153 ~~~~v~~~~ggrp~-----~e----d~~~p~~VD~~g~knlvdA~~~aGv----k~~vlv~si~~~~~~~~~~~~~~--~  217 (411)
T KOG1203|consen  153 GVVIVIKGAGGRPE-----EE----DIVTPEKVDYEGTKNLVDACKKAGV----KRVVLVGSIGGTKFNQPPNILLL--N  217 (411)
T ss_pred             cceeEEecccCCCC-----cc----cCCCcceecHHHHHHHHHHHHHhCC----ceEEEEEeecCcccCCCchhhhh--h
Confidence            24566666664322     11    1122234445567777777754333    45999999887765544333331  1


Q ss_pred             HHHHHH-HHHHHHhcCCCcEEEEEeCCcccCCccc
Q 024145          169 GILGLV-KCLAAELGQYGIRVNCVSPYGLATGMSM  202 (272)
Q Consensus       169 a~~~~~-~~la~e~~~~gi~v~~i~Pg~v~t~~~~  202 (272)
                      ....-. +.....+...|+.-..|.||..+.+...
T Consensus       218 ~~~~~~k~~~e~~~~~Sgl~ytiIR~g~~~~~~~~  252 (411)
T KOG1203|consen  218 GLVLKAKLKAEKFLQDSGLPYTIIRPGGLEQDTGG  252 (411)
T ss_pred             hhhhHHHHhHHHHHHhcCCCcEEEeccccccCCCC
Confidence            111111 2333445567999999999987765443

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=98.61  E-value=2.8e-06  Score=66.68  Aligned_cols=187  Identities=15%  Similarity=0.041  Sum_probs=119.4

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEeC
Q 024145           17 VAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNN   96 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~   96 (272)
                      ++-|.||||-.|..+++...++|+.|+++.|++.+...+     +.+..++.|+.|++++.+.+.       +.|.||..
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~-----~~~~i~q~Difd~~~~a~~l~-------g~DaVIsA   69 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR-----QGVTILQKDIFDLTSLASDLA-------GHDAVISA   69 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc-----ccceeecccccChhhhHhhhc-------CCceEEEe
Confidence            678999999999999999999999999999998765433     456789999999999866555       78999998


Q ss_pred             CCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccC--------CCCc-h-hhhh
Q 024145           97 AGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAG--------LGSP-A-YTIS  166 (272)
Q Consensus        97 ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~--------~~~~-~-Y~~s  166 (272)
                      -|...+  .     ..+..           ....++++..+......|++.++..+...-.        |..+ . |..+
T Consensus        70 ~~~~~~--~-----~~~~~-----------~k~~~~li~~l~~agv~RllVVGGAGSL~id~g~rLvD~p~fP~ey~~~A  131 (211)
T COG2910          70 FGAGAS--D-----NDELH-----------SKSIEALIEALKGAGVPRLLVVGGAGSLEIDEGTRLVDTPDFPAEYKPEA  131 (211)
T ss_pred             ccCCCC--C-----hhHHH-----------HHHHHHHHHHHhhcCCeeEEEEcCccceEEcCCceeecCCCCchhHHHHH
Confidence            875422  0     11111           1114445555555677889988777654422        2221 3 4444


Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCC-CCCChHhHHHHHHHHhcC
Q 024145          167 KYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKG-EFLKTDGIANAALYLASD  241 (272)
Q Consensus       167 K~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~dva~~~~~l~s~  241 (272)
                      ++.. -+...|..+   +++.-.-++|.....|..+....  ..-.+.  -...-.| ...+.+|-|-+++--+..
T Consensus       132 ~~~a-e~L~~Lr~~---~~l~WTfvSPaa~f~PGerTg~y--rlggD~--ll~n~~G~SrIS~aDYAiA~lDe~E~  199 (211)
T COG2910         132 LAQA-EFLDSLRAE---KSLDWTFVSPAAFFEPGERTGNY--RLGGDQ--LLVNAKGESRISYADYAIAVLDELEK  199 (211)
T ss_pred             HHHH-HHHHHHhhc---cCcceEEeCcHHhcCCccccCce--Eeccce--EEEcCCCceeeeHHHHHHHHHHHHhc
Confidence            4443 344555555   45777788998777775442110  000000  0011112 457889999888876654

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.50  E-value=7e-07  Score=79.03  Aligned_cols=77  Identities=23%  Similarity=0.456  Sum_probs=68.9

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcC-CeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEE
Q 024145           16 KVAIITGGASGIGAMAVELFHENG-AKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMY   94 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv   94 (272)
                      +.+||.|+ |++|+.++..|+++| .+|++++|+.+...++.+..+.++.+.++|+.|.+++.++++       ..|++|
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~-------~~d~VI   73 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIK-------DFDLVI   73 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHh-------cCCEEE
Confidence            57899998 999999999999999 799999999999888888777799999999999999988887       459999


Q ss_pred             eCCCCC
Q 024145           95 NNAGIL  100 (272)
Q Consensus        95 ~~ag~~  100 (272)
                      +++...
T Consensus        74 n~~p~~   79 (389)
T COG1748          74 NAAPPF   79 (389)
T ss_pred             EeCCch
Confidence            998753

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=98.48  E-value=1.4e-06  Score=71.36  Aligned_cols=217  Identities=18%  Similarity=0.127  Sum_probs=136.0

Q ss_pred             cCCCCCC-cEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcch-HHHHHHHh--------CCceEEEEecCCCHHHHHH
Q 024145            9 PFKRLEG-KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKL-GEDLADKL--------GQDVCYIHCDISNEDEVIN   78 (272)
Q Consensus         9 ~~~~l~~-k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~-~~~~~~~~--------~~~~~~~~~D~~~~~~~~~   78 (272)
                      ++..... |++||||=+|.=|.-+++-|+++|+.|..+-|+... .....+.+        ++.......|++|..++.+
T Consensus        21 e~~~~r~rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k  100 (376)
T KOG1372|consen   21 ELGAFRPRKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIK  100 (376)
T ss_pred             cccCcccceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHH
Confidence            3444444 699999999999999999999999999876655433 22333333        3467788899999999999


Q ss_pred             HHHHHHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccc---
Q 024145           79 LVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEI---  155 (272)
Q Consensus        79 ~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~---  155 (272)
                      +++.+     +++-+.|.|++++..      .+.+-.+..-++...|++.++.+....-...  +.-.+-.|.+-.+   
T Consensus       101 ~I~~i-----kPtEiYnLaAQSHVk------vSFdlpeYTAeVdavGtLRlLdAi~~c~l~~--~VrfYQAstSElyGkv  167 (376)
T KOG1372|consen  101 LISTI-----KPTEVYNLAAQSHVK------VSFDLPEYTAEVDAVGTLRLLDAIRACRLTE--KVRFYQASTSELYGKV  167 (376)
T ss_pred             HHhcc-----CchhhhhhhhhcceE------EEeecccceeeccchhhhhHHHHHHhcCccc--ceeEEecccHhhcccc
Confidence            99988     678888889877651      2333334455667778888888776654432  2333444443322   


Q ss_pred             ---------cCCCCchhhhhHHHHHHHHHHHHHHh---cCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhh------
Q 024145          156 ---------AGLGSPAYTISKYGILGLVKCLAAEL---GQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQ------  217 (272)
Q Consensus       156 ---------~~~~~~~Y~~sK~a~~~~~~~la~e~---~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~------  217 (272)
                               |+...++|+++|.+.-.++-.+...|   +=.||-+|.=+|.-=++=..++   ....+.+....      
T Consensus       168 ~e~PQsE~TPFyPRSPYa~aKmy~~WivvNyREAYnmfAcNGILFNHESPRRGenFVTRK---ItRsvakI~~gqqe~~~  244 (376)
T KOG1372|consen  168 QEIPQSETTPFYPRSPYAAAKMYGYWIVVNYREAYNMFACNGILFNHESPRRGENFVTRK---ITRSVAKISLGQQEKIE  244 (376)
T ss_pred             cCCCcccCCCCCCCChhHHhhhhheEEEEEhHHhhcceeeccEeecCCCCccccchhhHH---HHHHHHHhhhcceeeEE
Confidence                     33456799999987665554444443   3457777777774222212221   11111111110      


Q ss_pred             cCCC--CCCCCChHhHHHHHHHHhcC
Q 024145          218 MGNL--KGEFLKTDGIANAALYLASD  241 (272)
Q Consensus       218 ~~~~--~~~~~~~~dva~~~~~l~s~  241 (272)
                      .+++  .+.|+...|-++++...+..
T Consensus       245 LGNL~a~RDWGhA~dYVEAMW~mLQ~  270 (376)
T KOG1372|consen  245 LGNLSALRDWGHAGDYVEAMWLMLQQ  270 (376)
T ss_pred             ecchhhhcccchhHHHHHHHHHHHhc
Confidence            0111  26777888888887776643

>PLN00106 malate dehydrogenase

Probab=98.35  E-value=5.9e-06  Score=72.08  Aligned_cols=151  Identities=15%  Similarity=0.115  Sum_probs=95.6

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC--eEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGA--KVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   91 (272)
                      ..++++|||++|.+|.+++..|+.++.  ++++++.++...+ ..+...........++++.+++...+.       +.|
T Consensus        17 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~-a~Dl~~~~~~~~i~~~~~~~d~~~~l~-------~aD   88 (323)
T PLN00106         17 PGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGV-AADVSHINTPAQVRGFLGDDQLGDALK-------GAD   88 (323)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCee-EchhhhCCcCceEEEEeCCCCHHHHcC-------CCC
Confidence            446999999999999999999998764  7999998762211 111111111112234333333333333       799


Q ss_pred             EEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccccc-------------ccCC
Q 024145           92 IMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTE-------------IAGL  158 (272)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~-------------~~~~  158 (272)
                      ++|+.||....+     .   ..+.+.+..|+.....+.+.+.++-   ..+ +++++|--..             .+.+
T Consensus        89 iVVitAG~~~~~-----g---~~R~dll~~N~~i~~~i~~~i~~~~---p~a-ivivvSNPvD~~~~i~t~~~~~~s~~p  156 (323)
T PLN00106         89 LVIIPAGVPRKP-----G---MTRDDLFNINAGIVKTLCEAVAKHC---PNA-LVNIISNPVNSTVPIAAEVLKKAGVYD  156 (323)
T ss_pred             EEEEeCCCCCCC-----C---CCHHHHHHHHHHHHHHHHHHHHHHC---CCe-EEEEeCCCccccHHHHHHHHHHcCCCC
Confidence            999999975331     1   2356778888888777766665533   233 5555553321             2355


Q ss_pred             CCchhhhhHHHHHHHHHHHHHHhcCC
Q 024145          159 GSPAYTISKYGILGLVKCLAAELGQY  184 (272)
Q Consensus       159 ~~~~Y~~sK~a~~~~~~~la~e~~~~  184 (272)
                      ....|+.++.-.+.|-..+|.++.-.
T Consensus       157 ~~~viG~~~LDs~Rl~~~lA~~lgv~  182 (323)
T PLN00106        157 PKKLFGVTTLDVVRANTFVAEKKGLD  182 (323)
T ss_pred             cceEEEEecchHHHHHHHHHHHhCCC
Confidence            66789999877777888899887543

>PRK09620 hypothetical protein; Provisional

Probab=98.35  E-value=9.5e-07  Score=73.39  Aligned_cols=82  Identities=18%  Similarity=0.223  Sum_probs=52.2

Q ss_pred             CCCcEEEEeCCC----------------ChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh--CCceEEEEecCCCHH
Q 024145           13 LEGKVAIITGGA----------------SGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL--GQDVCYIHCDISNED   74 (272)
Q Consensus        13 l~~k~vlItGas----------------~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~   74 (272)
                      |+||++|||+|.                |.+|.+++++|+++|++|+++++......   ...  +..+..+..    ..
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~---~~~~~~~~~~~V~s----~~   73 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKP---NDINNQLELHPFEG----II   73 (229)
T ss_pred             CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCC---cccCCceeEEEEec----HH
Confidence            579999999885                99999999999999999998876322110   011  112223333    22


Q ss_pred             HHHHHHHHHHHHhCCccEEEeCCCCCCC
Q 024145           75 EVINLVDTAVSKFGKLDIMYNNAGILDR  102 (272)
Q Consensus        75 ~~~~~~~~~~~~~g~id~lv~~ag~~~~  102 (272)
                      ++...+.++.++ ..+|++||+|++...
T Consensus        74 d~~~~l~~~~~~-~~~D~VIH~AAvsD~  100 (229)
T PRK09620         74 DLQDKMKSIITH-EKVDAVIMAAAGSDW  100 (229)
T ss_pred             HHHHHHHHHhcc-cCCCEEEECccccce
Confidence            222223333221 258999999998765

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.32  E-value=3.3e-06  Score=64.43  Aligned_cols=77  Identities=22%  Similarity=0.352  Sum_probs=59.9

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCe-EEEeecCcchHHHHHHHhCC-ceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAK-VVIADVQDKLGEDLADKLGQ-DVCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~-V~~~~r~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      .++++|+++|.|+ ||.|++++.+|++.|++ |+++.|+.++.+++.+..+. .+..+..+  +..   ..+.       
T Consensus         8 ~~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~--~~~---~~~~-------   74 (135)
T PF01488_consen    8 GDLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLE--DLE---EALQ-------   74 (135)
T ss_dssp             STGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGG--GHC---HHHH-------
T ss_pred             CCcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHH--HHH---HHHh-------
Confidence            4789999999997 99999999999999986 99999999999999888842 35455442  222   2222       


Q ss_pred             CccEEEeCCCCC
Q 024145           89 KLDIMYNNAGIL  100 (272)
Q Consensus        89 ~id~lv~~ag~~  100 (272)
                      ..|++|++.+..
T Consensus        75 ~~DivI~aT~~~   86 (135)
T PF01488_consen   75 EADIVINATPSG   86 (135)
T ss_dssp             TESEEEE-SSTT
T ss_pred             hCCeEEEecCCC
Confidence            689999998754

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=98.28  E-value=3.6e-06  Score=68.61  Aligned_cols=217  Identities=16%  Similarity=0.200  Sum_probs=128.9

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHc-CCe-EEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHEN-GAK-VVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~-G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      .+-.++||||+-|-+|..+|+.|-.+ |-+ |++.+-.... +...+ .|   -++-.|+.|..++++++-.     .++
T Consensus        42 ~~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp-~~V~~-~G---PyIy~DILD~K~L~eIVVn-----~RI  111 (366)
T KOG2774|consen   42 QKAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPP-ANVTD-VG---PYIYLDILDQKSLEEIVVN-----KRI  111 (366)
T ss_pred             CCCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCc-hhhcc-cC---CchhhhhhccccHHHhhcc-----ccc
Confidence            34568999999999999999988766 654 6665433222 11111 12   2566788888887776542     279


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccC------------C
Q 024145           91 DIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAG------------L  158 (272)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~------------~  158 (272)
                      |-+||..+....       ..+...--..++|+.|..++++.+..+-.+     +..-|.+++..+.            .
T Consensus       112 dWL~HfSALLSA-------vGE~NVpLA~~VNI~GvHNil~vAa~~kL~-----iFVPSTIGAFGPtSPRNPTPdltIQR  179 (366)
T KOG2774|consen  112 DWLVHFSALLSA-------VGETNVPLALQVNIRGVHNILQVAAKHKLK-----VFVPSTIGAFGPTSPRNPTPDLTIQR  179 (366)
T ss_pred             ceeeeHHHHHHH-------hcccCCceeeeecchhhhHHHHHHHHcCee-----EeecccccccCCCCCCCCCCCeeeec
Confidence            999997765432       122233345689999999999988765442     4444444444331            1


Q ss_pred             CCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEe-CCcccCCcccCCCCChhHHHHHHhhc---------CCC-CCCCCC
Q 024145          159 GSPAYTISKYGILGLVKCLAAELGQYGIRVNCVS-PYGLATGMSMKGGVDPALIESSMSQM---------GNL-KGEFLK  227 (272)
Q Consensus       159 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~-Pg~v~t~~~~~~~~~~~~~~~~~~~~---------~~~-~~~~~~  227 (272)
                      ....|++||.-.|-+.+.+..++   |+.+.++. ||.+..+-... +.......-+....         .|. .-.++.
T Consensus       180 PRTIYGVSKVHAEL~GEy~~hrF---g~dfr~~rfPg~is~~~pgg-gttdya~A~f~~Al~~gk~tCylrpdtrlpmmy  255 (366)
T KOG2774|consen  180 PRTIYGVSKVHAELLGEYFNHRF---GVDFRSMRFPGIISATKPGG-GTTDYAIAIFYDALQKGKHTCYLRPDTRLPMMY  255 (366)
T ss_pred             CceeechhHHHHHHHHHHHHhhc---CccceecccCcccccCCCCC-CcchhHHHHHHHHHHcCCcccccCCCccCceee
Confidence            34579999999999888887774   56666653 55554321110 01111111111111         010 013466


Q ss_pred             hHhHHHHHHHHhcCCCCCccccEEEecC
Q 024145          228 TDGIANAALYLASDESSYVSGQNLVVDG  255 (272)
Q Consensus       228 ~~dva~~~~~l~s~~~~~~~G~~i~~dg  255 (272)
                      .+|+..+++.++..++....-.++++.|
T Consensus       256 ~~dc~~~~~~~~~a~~~~lkrr~ynvt~  283 (366)
T KOG2774|consen  256 DTDCMASVIQLLAADSQSLKRRTYNVTG  283 (366)
T ss_pred             hHHHHHHHHHHHhCCHHHhhhheeeece
Confidence            7888888887776555555556666653

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.22  E-value=6.5e-06  Score=74.00  Aligned_cols=74  Identities=27%  Similarity=0.495  Sum_probs=60.4

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCC--eEEEeecCcchHHHHHHH-hCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEE
Q 024145           18 AIITGGASGIGAMAVELFHENGA--KVVIADVQDKLGEDLADK-LGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMY   94 (272)
Q Consensus        18 vlItGas~giG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv   94 (272)
                      |+|.|+ |.+|+.+++.|++++-  +|++.+|+.++++++.++ .+.++.++++|+.|.+++++++.       ..|++|
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~-------~~dvVi   72 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLR-------GCDVVI   72 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHT-------TSSEEE
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHh-------cCCEEE
Confidence            689999 9999999999999974  799999999998888876 46789999999999999888776       569999


Q ss_pred             eCCCC
Q 024145           95 NNAGI   99 (272)
Q Consensus        95 ~~ag~   99 (272)
                      |++|.
T Consensus        73 n~~gp   77 (386)
T PF03435_consen   73 NCAGP   77 (386)
T ss_dssp             E-SSG
T ss_pred             ECCcc
Confidence            99985

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PRK14982 acyl-ACP reductase; Provisional

Probab=98.16  E-value=1.2e-05  Score=70.43  Aligned_cols=73  Identities=19%  Similarity=0.297  Sum_probs=55.1

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHc-C-CeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHEN-G-AKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGK   89 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~-G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (272)
                      ++++|+++||||+|.||+.++++|+++ | .+++++.|+..++..+.+++..      .|+.   +++       +.+..
T Consensus       152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~------~~i~---~l~-------~~l~~  215 (340)
T PRK14982        152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGG------GKIL---SLE-------EALPE  215 (340)
T ss_pred             CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhcc------ccHH---hHH-------HHHcc
Confidence            689999999999999999999999865 5 5799999988877776665431      2222   222       23346


Q ss_pred             ccEEEeCCCCC
Q 024145           90 LDIMYNNAGIL  100 (272)
Q Consensus        90 id~lv~~ag~~  100 (272)
                      .|++|+.++..
T Consensus       216 aDiVv~~ts~~  226 (340)
T PRK14982        216 ADIVVWVASMP  226 (340)
T ss_pred             CCEEEECCcCC
Confidence            89999999864

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=98.09  E-value=1.5e-05  Score=73.16  Aligned_cols=76  Identities=18%  Similarity=0.378  Sum_probs=57.4

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCc-chHHHHHHHhC-CceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQD-KLGEDLADKLG-QDVCYIHCDISNEDEVINLVDTAVSKFGK   89 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~-~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (272)
                      ++++|+++|+|+++ +|.++++.|+++|++|++++++. +..++..+++. ..+.++..|..+            +..+.
T Consensus         2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~------------~~~~~   68 (450)
T PRK14106          2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELGIELVLGEYPE------------EFLEG   68 (450)
T ss_pred             CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCEEEeCCcch------------hHhhc
Confidence            57899999999887 99999999999999999999875 33333333332 246677777765            11247


Q ss_pred             ccEEEeCCCCC
Q 024145           90 LDIMYNNAGIL  100 (272)
Q Consensus        90 id~lv~~ag~~  100 (272)
                      +|+||+++|..
T Consensus        69 ~d~vv~~~g~~   79 (450)
T PRK14106         69 VDLVVVSPGVP   79 (450)
T ss_pred             CCEEEECCCCC
Confidence            89999999864

>PTZ00325 malate dehydrogenase; Provisional

Probab=98.09  E-value=3.5e-05  Score=67.20  Aligned_cols=146  Identities=16%  Similarity=0.061  Sum_probs=89.2

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcC--CeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENG--AKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   91 (272)
                      +-+++.|+|++|.+|..++..|+.++  .++++++++....+ ..+.......+...+.+|+.++.+.+.       +.|
T Consensus         7 ~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~-a~Dl~~~~~~~~v~~~td~~~~~~~l~-------gaD   78 (321)
T PTZ00325          7 KMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGV-AADLSHIDTPAKVTGYADGELWEKALR-------GAD   78 (321)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCccc-ccchhhcCcCceEEEecCCCchHHHhC-------CCC
Confidence            45699999999999999999999765  57999998322221 111111111223345555444333333       789


Q ss_pred             EEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccc-------------cccCC
Q 024145           92 IMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACT-------------EIAGL  158 (272)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~-------------~~~~~  158 (272)
                      ++|+.+|....+        .+.+.+.+..|+...-.+++.+.++    +.-++|+++|-..             ..+.|
T Consensus        79 vVVitaG~~~~~--------~~tR~dll~~N~~i~~~i~~~i~~~----~~~~iviv~SNPvdv~~~~~~~~~~~~sg~p  146 (321)
T PTZ00325         79 LVLICAGVPRKP--------GMTRDDLFNTNAPIVRDLVAAVASS----APKAIVGIVSNPVNSTVPIAAETLKKAGVYD  146 (321)
T ss_pred             EEEECCCCCCCC--------CCCHHHHHHHHHHHHHHHHHHHHHH----CCCeEEEEecCcHHHHHHHHHhhhhhccCCC
Confidence            999999974321        1235667888888877777766553    3345777776421             12345


Q ss_pred             CCchhhhhHHHHHHH--HHHHHHHh
Q 024145          159 GSPAYTISKYGILGL--VKCLAAEL  181 (272)
Q Consensus       159 ~~~~Y~~sK~a~~~~--~~~la~e~  181 (272)
                      ....|+.+  .|++.  -..+|..+
T Consensus       147 ~~~viG~g--~LDs~R~r~~la~~l  169 (321)
T PTZ00325        147 PRKLFGVT--TLDVVRARKFVAEAL  169 (321)
T ss_pred             hhheeech--hHHHHHHHHHHHHHh
Confidence            55578876  26554  45555554

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=98.04  E-value=6.3e-05  Score=58.83  Aligned_cols=160  Identities=14%  Similarity=0.079  Sum_probs=103.8

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCC--eEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGA--KVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      ++++++.++|.||||-.|..+.+++++.+-  .|+++.|++....    ..+..+.....|.+..++..       +.+.
T Consensus        14 f~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~----at~k~v~q~~vDf~Kl~~~a-------~~~q   82 (238)
T KOG4039|consen   14 FRMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDP----ATDKVVAQVEVDFSKLSQLA-------TNEQ   82 (238)
T ss_pred             HhhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCc----cccceeeeEEechHHHHHHH-------hhhc
Confidence            668899999999999999999999999983  6888888753322    12234555566665544432       2334


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHH
Q 024145           89 KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKY  168 (272)
Q Consensus        89 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~  168 (272)
                      ++|+++++-|.+....+ .     +.+   +.+.=.-.+.+.+.+..    ++-..++.+||..+....  ...|--.|.
T Consensus        83 g~dV~FcaLgTTRgkaG-a-----dgf---ykvDhDyvl~~A~~AKe----~Gck~fvLvSS~GAd~sS--rFlY~k~KG  147 (238)
T KOG4039|consen   83 GPDVLFCALGTTRGKAG-A-----DGF---YKVDHDYVLQLAQAAKE----KGCKTFVLVSSAGADPSS--RFLYMKMKG  147 (238)
T ss_pred             CCceEEEeecccccccc-c-----Cce---EeechHHHHHHHHHHHh----CCCeEEEEEeccCCCccc--ceeeeeccc
Confidence            89999999987654212 1     111   11111112344444433    455679999998876543  347888998


Q ss_pred             HHHHHHHHHHHHhcCCCcEEEEEeCCcccCCccc
Q 024145          169 GILGLVKCLAAELGQYGIRVNCVSPYGLATGMSM  202 (272)
Q Consensus       169 a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~  202 (272)
                      -++.=+..|--+      ++.+++||++..+...
T Consensus       148 EvE~~v~eL~F~------~~~i~RPG~ll~~R~e  175 (238)
T KOG4039|consen  148 EVERDVIELDFK------HIIILRPGPLLGERTE  175 (238)
T ss_pred             hhhhhhhhcccc------EEEEecCcceeccccc
Confidence            887644443222      6788999999877654

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=98.01  E-value=3.1e-05  Score=67.89  Aligned_cols=118  Identities=11%  Similarity=0.112  Sum_probs=65.6

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcC-------CeEEEeecCcch--HHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           17 VAIITGGASGIGAMAVELFHENG-------AKVVIADVQDKL--GEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G-------~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      +++||||+|.+|.+++..|+..+       .+|++.++++..  ++...-++..-......|+....+       ..+.+
T Consensus         4 kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~~~~~~~~~~~~~-------~~~~l   76 (325)
T cd01336           4 RVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCAFPLLKSVVATTD-------PEEAF   76 (325)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhccccccCCceecCC-------HHHHh
Confidence            68999999999999999999854       589999986531  111000000000001112222222       22333


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecc
Q 024145           88 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASA  151 (272)
Q Consensus        88 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~  151 (272)
                      .+.|+|||.||....+     ..+   -.+.++.|+.-.-.+.+.+.++-  ...+.++.+|..
T Consensus        77 ~~aDiVI~tAG~~~~~-----~~~---R~~l~~~N~~i~~~i~~~i~~~~--~~~~iiivvsNP  130 (325)
T cd01336          77 KDVDVAILVGAMPRKE-----GME---RKDLLKANVKIFKEQGEALDKYA--KKNVKVLVVGNP  130 (325)
T ss_pred             CCCCEEEEeCCcCCCC-----CCC---HHHHHHHHHHHHHHHHHHHHHhC--CCCeEEEEecCc
Confidence            4799999999975431     122   24556667664444444433321  136767777653

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=97.98  E-value=0.00014  Score=62.80  Aligned_cols=79  Identities=20%  Similarity=0.321  Sum_probs=56.0

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      .|++++|+|+++++|.++++.+...|.+|++++++.+..+.+ .+++..   ..+|..+.+..+.+.....  ..++|++
T Consensus       144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~---~~~~~~~~~~~~~~~~~~~--~~~~d~v  217 (325)
T cd08253         144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELV-RQAGAD---AVFNYRAEDLADRILAATA--GQGVDVI  217 (325)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCC---EEEeCCCcCHHHHHHHHcC--CCceEEE
Confidence            678999999999999999999999999999999887766555 344432   2245555444444332221  1369999


Q ss_pred             EeCCC
Q 024145           94 YNNAG   98 (272)
Q Consensus        94 v~~ag   98 (272)
                      ++++|
T Consensus       218 i~~~~  222 (325)
T cd08253         218 IEVLA  222 (325)
T ss_pred             EECCc
Confidence            99886

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.87  E-value=0.00011  Score=63.20  Aligned_cols=76  Identities=22%  Similarity=0.333  Sum_probs=55.5

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcC-CeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENG-AKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      ++++|+++|+|+ ||+|++++.+|++.| .+|++++|+.++.+++.+.+..... +..++    +..       +.....
T Consensus       120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~-~~~~~----~~~-------~~~~~~  186 (278)
T PRK00258        120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGK-AELDL----ELQ-------EELADF  186 (278)
T ss_pred             CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccc-eeecc----cch-------hccccC
Confidence            578899999997 999999999999999 6899999999888888776643210 11111    111       112368


Q ss_pred             cEEEeCCCCC
Q 024145           91 DIMYNNAGIL  100 (272)
Q Consensus        91 d~lv~~ag~~  100 (272)
                      |++|++....
T Consensus       187 DivInaTp~g  196 (278)
T PRK00258        187 DLIINATSAG  196 (278)
T ss_pred             CEEEECCcCC
Confidence            9999998754

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=97.86  E-value=5e-05  Score=65.58  Aligned_cols=76  Identities=20%  Similarity=0.292  Sum_probs=64.6

Q ss_pred             EEEEeCCCChHHHHHHHHHHH----cCCeEEEeecCcchHHHHHHHhCC-------ceEEEEecCCCHHHHHHHHHHHHH
Q 024145           17 VAIITGGASGIGAMAVELFHE----NGAKVVIADVQDKLGEDLADKLGQ-------DVCYIHCDISNEDEVINLVDTAVS   85 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~----~G~~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~D~~~~~~~~~~~~~~~~   85 (272)
                      -++|.||||..|.-+++.+.+    .|..+.+.+|+++++++..+..+.       ....+.||.+|++++.+++.+   
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~---   83 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQ---   83 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhh---
Confidence            479999999999999999999    688899999999999988876621       233889999999999888774   


Q ss_pred             HhCCccEEEeCCCC
Q 024145           86 KFGKLDIMYNNAGI   99 (272)
Q Consensus        86 ~~g~id~lv~~ag~   99 (272)
                          ..+++|++|-
T Consensus        84 ----~~vivN~vGP   93 (423)
T KOG2733|consen   84 ----ARVIVNCVGP   93 (423)
T ss_pred             ----hEEEEecccc
Confidence                5899999985

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=97.79  E-value=0.00051  Score=74.27  Aligned_cols=179  Identities=12%  Similarity=0.101  Sum_probs=116.2

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   91 (272)
                      .+.++.++|++..++++.+++.+|.++|+.|+.+...... .......+..+..+.+.-.+.+++..+++.+....+.++
T Consensus      1752 ~~~~~~~~v~~d~~~~~~~L~~~L~~~G~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1830 (2582)
T TIGR02813      1752 KQSGANALVIDDDGHNAGVLAEKLIAAGWQVAVVRSPWVV-SHSASPLASAIASVTLGTIDDTSIEAVIKDIEEKTAQID 1830 (2582)
T ss_pred             cccCceeEEEcCCcchHHHHHHHHHhCCCeEEEeeccccc-cccccccccccccccccccchHHHHHHHHhhhccccccc
Confidence            3457888888889999999999999999998776422110 000011122344456666677888888888877778899


Q ss_pred             EEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchh--------
Q 024145           92 IMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAY--------  163 (272)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y--------  163 (272)
                      .+||..+............   .....-...+...|.+.|.+.+.+...+.+.++.++...|..++......        
T Consensus      1831 g~i~l~~~~~~~~~~~~~~---~~~~~~~~~l~~~f~~ak~~~~~l~~~~~~~~~~vsr~~G~~g~~~~~~~~~~~~~~~ 1907 (2582)
T TIGR02813      1831 GFIHLQPQHKSVADKVDAI---ELPEAAKQSLMLAFLFAKLLNVKLATNARASFVTVSRIDGGFGYSNGDADSGTQQVKA 1907 (2582)
T ss_pred             eEEEecccccccccccccc---ccchhhHHHHHHHHHHHHhhchhhccCCCeEEEEEEecCCccccCCcccccccccccc
Confidence            9999877542100001111   11111123444578888887776665566788889888776665433221        


Q ss_pred             hhhHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Q 024145          164 TISKYGILGLVKCLAAELGQYGIRVNCVSPY  194 (272)
Q Consensus       164 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg  194 (272)
                      ....+++.+|+|+++.|+.....+...+.|.
T Consensus      1908 ~~~~a~l~Gl~Ktl~~E~P~~~~r~vDl~~~ 1938 (2582)
T TIGR02813      1908 ELNQAALAGLTKTLNHEWNAVFCRALDLAPK 1938 (2582)
T ss_pred             chhhhhHHHHHHhHHHHCCCCeEEEEeCCCC
Confidence            3457899999999999997655666666663

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.77  E-value=0.00014  Score=56.48  Aligned_cols=75  Identities=25%  Similarity=0.375  Sum_probs=55.6

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcC-CeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENG-AKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   91 (272)
                      +++++++|+|+ |++|.++++.|++.| .+|.+.+|+++..+++.++.+...  +..+..+.++.          ....|
T Consensus        17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~~----------~~~~D   83 (155)
T cd01065          17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG--IAIAYLDLEEL----------LAEAD   83 (155)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc--cceeecchhhc----------cccCC
Confidence            57889999998 899999999999996 789999999888777777664321  22333343322          23789


Q ss_pred             EEEeCCCCC
Q 024145           92 IMYNNAGIL  100 (272)
Q Consensus        92 ~lv~~ag~~  100 (272)
                      ++|++....
T Consensus        84 vvi~~~~~~   92 (155)
T cd01065          84 LIINTTPVG   92 (155)
T ss_pred             EEEeCcCCC
Confidence            999999754

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.73  E-value=0.00019  Score=57.61  Aligned_cols=79  Identities=25%  Similarity=0.332  Sum_probs=48.9

Q ss_pred             CCCcEEEEeCC----------------CChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHH
Q 024145           13 LEGKVAIITGG----------------ASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEV   76 (272)
Q Consensus        13 l~~k~vlItGa----------------s~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   76 (272)
                      |+||++|||+|                ||-.|.++|+.+..+|++|+++...... .     .+..+..  .++.+.+++
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~~-~-----~p~~~~~--i~v~sa~em   72 (185)
T PF04127_consen    1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSSL-P-----PPPGVKV--IRVESAEEM   72 (185)
T ss_dssp             -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS----------TTEEE--EE-SSHHHH
T ss_pred             CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCccc-c-----ccccceE--EEecchhhh
Confidence            57899999976                6889999999999999999988765321 0     1234433  345566665


Q ss_pred             HHHHHHHHHHhCCccEEEeCCCCCCC
Q 024145           77 INLVDTAVSKFGKLDIMYNNAGILDR  102 (272)
Q Consensus        77 ~~~~~~~~~~~g~id~lv~~ag~~~~  102 (272)
                      .+.+.   +.+..-|++|++|++...
T Consensus        73 ~~~~~---~~~~~~Di~I~aAAVsDf   95 (185)
T PF04127_consen   73 LEAVK---ELLPSADIIIMAAAVSDF   95 (185)
T ss_dssp             HHHHH---HHGGGGSEEEE-SB--SE
T ss_pred             hhhhc---cccCcceeEEEecchhhe
Confidence            54444   444556999999998765

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=97.72  E-value=0.00021  Score=66.79  Aligned_cols=48  Identities=35%  Similarity=0.529  Sum_probs=42.9

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhC
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLG   60 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~   60 (272)
                      ++++|+++|+|+ ||+|++++.+|++.|++|++++|+.++.+++.+.++
T Consensus       376 ~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l~  423 (529)
T PLN02520        376 PLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAVG  423 (529)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhC
Confidence            578999999999 699999999999999999999999888887777664

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.63  E-value=0.00023  Score=60.78  Aligned_cols=73  Identities=18%  Similarity=0.308  Sum_probs=54.2

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCC--ceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQ--DVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      .++|+++|+|+ ||+|++++.+|++.|++|.+++|+.++.+++.+.+..  .+.....|     +.         .....
T Consensus       115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~~~-----~~---------~~~~~  179 (270)
T TIGR00507       115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAFSMD-----EL---------PLHRV  179 (270)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEechh-----hh---------cccCc
Confidence            46889999998 6999999999999999999999998888777776532  12222111     10         11368


Q ss_pred             cEEEeCCCCC
Q 024145           91 DIMYNNAGIL  100 (272)
Q Consensus        91 d~lv~~ag~~  100 (272)
                      |++|++.+..
T Consensus       180 DivInatp~g  189 (270)
T TIGR00507       180 DLIINATSAG  189 (270)
T ss_pred             cEEEECCCCC
Confidence            9999999864

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=97.55  E-value=0.00078  Score=59.02  Aligned_cols=116  Identities=9%  Similarity=0.115  Sum_probs=69.9

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCC-------eEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHH--HH--HHHHHH
Q 024145           17 VAIITGGASGIGAMAVELFHENGA-------KVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVI--NL--VDTAVS   85 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~--~~--~~~~~~   85 (272)
                      ++.|+|++|.+|.+++..|+..|.       ++++.++++...         .......|+.|.....  ..  .....+
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~---------~a~g~~~Dl~d~~~~~~~~~~~~~~~~~   71 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK---------VLEGVVMELMDCAFPLLDGVVPTHDPAV   71 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc---------ccceeEeehhcccchhcCceeccCChHH
Confidence            478999999999999999998653       589999865421         1234455665544110  00  001234


Q ss_pred             HhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecc
Q 024145           86 KFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASA  151 (272)
Q Consensus        86 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~  151 (272)
                      .+...|++|+.||....        ..+...+.++.|+.-.-.+.+.+.++-  .+.+.++.+|-.
T Consensus        72 ~~~~aDiVVitAG~~~~--------~~~tr~~ll~~N~~i~k~i~~~i~~~~--~~~~iiivvsNP  127 (324)
T TIGR01758        72 AFTDVDVAILVGAFPRK--------EGMERRDLLSKNVKIFKEQGRALDKLA--KKDCKVLVVGNP  127 (324)
T ss_pred             HhCCCCEEEEcCCCCCC--------CCCcHHHHHHHHHHHHHHHHHHHHhhC--CCCeEEEEeCCc
Confidence            44579999999997432        112356667777665544444443321  145777777653

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.54  E-value=0.0022  Score=57.39  Aligned_cols=77  Identities=27%  Similarity=0.337  Sum_probs=56.9

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDI   92 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   92 (272)
                      +.+++++|.|+ |.+|+.+++.+...|++|++++|+.+..+.+.+..+..   +..+..+.+++.+.+       ...|+
T Consensus       165 l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~---v~~~~~~~~~l~~~l-------~~aDv  233 (370)
T TIGR00518       165 VEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGR---IHTRYSNAYEIEDAV-------KRADL  233 (370)
T ss_pred             CCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCce---eEeccCCHHHHHHHH-------ccCCE
Confidence            56678999987 89999999999999999999999887776665555432   223455555554433       26799


Q ss_pred             EEeCCCCC
Q 024145           93 MYNNAGIL  100 (272)
Q Consensus        93 lv~~ag~~  100 (272)
                      +|++++..
T Consensus       234 VI~a~~~~  241 (370)
T TIGR00518       234 LIGAVLIP  241 (370)
T ss_pred             EEEccccC
Confidence            99988653

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=97.53  E-value=0.00053  Score=58.93  Aligned_cols=78  Identities=18%  Similarity=0.284  Sum_probs=54.5

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHHHHHHHhCCceE---EEEecCCCHHHHHHHHHHHHHHh
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGEDLADKLGQDVC---YIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~---~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      ++++|+++|.|+ ||-+++++..|++.|+ +|+++.|+.++.+++.+.+.....   ....|   ..+.....       
T Consensus       124 ~~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~~~~---~~~~~~~~-------  192 (283)
T PRK14027        124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVD---ARGIEDVI-------  192 (283)
T ss_pred             CcCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEEecC---HhHHHHHH-------
Confidence            467899999996 9999999999999997 689999999888888776532111   11122   22221111       


Q ss_pred             CCccEEEeCCCCC
Q 024145           88 GKLDIMYNNAGIL  100 (272)
Q Consensus        88 g~id~lv~~ag~~  100 (272)
                      ...|++||+....
T Consensus       193 ~~~divINaTp~G  205 (283)
T PRK14027        193 AAADGVVNATPMG  205 (283)
T ss_pred             hhcCEEEEcCCCC
Confidence            2579999988653

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.51  E-value=0.0004  Score=63.69  Aligned_cols=78  Identities=27%  Similarity=0.328  Sum_probs=51.2

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhC-CceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLG-QDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      +++||+++|||+++ +|.++++.|++.|++|++.+++........+.+. ..+.+...+  +..++   .+      ..+
T Consensus         2 ~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g~~~~~~~--~~~~~---~~------~~~   69 (447)
T PRK02472          2 EYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEGIKVICGS--HPLEL---LD------EDF   69 (447)
T ss_pred             CcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcCCEEEeCC--CCHHH---hc------CcC
Confidence            46899999999976 9999999999999999999876543322222221 123332221  12221   11      148


Q ss_pred             cEEEeCCCCCC
Q 024145           91 DIMYNNAGILD  101 (272)
Q Consensus        91 d~lv~~ag~~~  101 (272)
                      |++|+++|+..
T Consensus        70 d~vV~s~gi~~   80 (447)
T PRK02472         70 DLMVKNPGIPY   80 (447)
T ss_pred             CEEEECCCCCC
Confidence            99999999754

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=97.49  E-value=0.00053  Score=58.99  Aligned_cols=79  Identities=13%  Similarity=0.089  Sum_probs=55.7

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      ++++|+++|.|+ ||.+++++.+|++.|+ +|.++.|+.++.+++.+..+........  ...+++.       ......
T Consensus       122 ~~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~--~~~~~~~-------~~~~~~  191 (282)
T TIGR01809       122 PLAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRL--EGDSGGL-------AIEKAA  191 (282)
T ss_pred             ccCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceec--cchhhhh-------hcccCC
Confidence            467899999985 9999999999999997 6999999999888888766432111111  1112221       112368


Q ss_pred             cEEEeCCCCC
Q 024145           91 DIMYNNAGIL  100 (272)
Q Consensus        91 d~lv~~ag~~  100 (272)
                      |+|||+....
T Consensus       192 DiVInaTp~g  201 (282)
T TIGR01809       192 EVLVSTVPAD  201 (282)
T ss_pred             CEEEECCCCC
Confidence            9999998753

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=97.48  E-value=0.00061  Score=61.64  Aligned_cols=78  Identities=13%  Similarity=0.217  Sum_probs=58.2

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGK   89 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (272)
                      .++.||+++|.|+ |++|+.++++|++.|. +++++.|+.++.+.+.++.+. ...+     ..++...       ....
T Consensus       177 ~~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~-~~~~-----~~~~l~~-------~l~~  242 (414)
T PRK13940        177 DNISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRN-ASAH-----YLSELPQ-------LIKK  242 (414)
T ss_pred             cCccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcC-CeEe-----cHHHHHH-------Hhcc
Confidence            4688999999997 9999999999999996 699999998888888877642 1111     1223222       2336


Q ss_pred             ccEEEeCCCCCCC
Q 024145           90 LDIMYNNAGILDR  102 (272)
Q Consensus        90 id~lv~~ag~~~~  102 (272)
                      .|++|++.+..++
T Consensus       243 aDiVI~aT~a~~~  255 (414)
T PRK13940        243 ADIIIAAVNVLEY  255 (414)
T ss_pred             CCEEEECcCCCCe
Confidence            8999999986543

>cd00704 MDH Malate dehydrogenase

Probab=97.47  E-value=0.0016  Score=57.01  Aligned_cols=113  Identities=12%  Similarity=0.103  Sum_probs=67.0

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCC-------eEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHH--H--HHHHHHHH
Q 024145           17 VAIITGGASGIGAMAVELFHENGA-------KVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEV--I--NLVDTAVS   85 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~--~--~~~~~~~~   85 (272)
                      ++.||||+|.+|..++..|+..|.       ++++.++++..         ........|+.|....  .  .+-....+
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~---------~~~~g~~~Dl~d~~~~~~~~~~i~~~~~~   72 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAM---------KALEGVVMELQDCAFPLLKGVVITTDPEE   72 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCcc---------CccceeeeehhhhcccccCCcEEecChHH
Confidence            589999999999999999998762       48999987621         1123344555544200  0  00012334


Q ss_pred             HhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCC--CCceEEEEec
Q 024145           86 KFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQ--QKGCILFTAS  150 (272)
Q Consensus        86 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~g~iv~iss  150 (272)
                      .+.+.|++|+.||....+     ..+   -.+.++.|+.-.    +.+.+.+.+.  +.+.++.+|-
T Consensus        73 ~~~~aDiVVitAG~~~~~-----g~t---R~dll~~N~~i~----~~i~~~i~~~~~~~~iiivvsN  127 (323)
T cd00704          73 AFKDVDVAILVGAFPRKP-----GME---RADLLRKNAKIF----KEQGEALNKVAKPTVKVLVVGN  127 (323)
T ss_pred             HhCCCCEEEEeCCCCCCc-----CCc---HHHHHHHhHHHH----HHHHHHHHHhCCCCeEEEEeCC
Confidence            445899999999975331     122   334556565544    4444444443  4666777654

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK05086 malate dehydrogenase; Provisional

Probab=97.41  E-value=0.0013  Score=57.38  Aligned_cols=103  Identities=18%  Similarity=0.165  Sum_probs=58.4

Q ss_pred             cEEEEeCCCChHHHHHHHHHHH-c--CCeEEEeecCcchHHHHHHHhC-CceEEEEe-cCCCHHHHHHHHHHHHHHhCCc
Q 024145           16 KVAIITGGASGIGAMAVELFHE-N--GAKVVIADVQDKLGEDLADKLG-QDVCYIHC-DISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~-~--G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~-D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      ++++|.||+|++|.+++..|.. .  +..+++.+|++.......+... .....+.. +-.+   +       .+.....
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~g~alDl~~~~~~~~i~~~~~~d---~-------~~~l~~~   70 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGED---P-------TPALEGA   70 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCcceehhhhcCCCCceEEEeCCCC---H-------HHHcCCC
Confidence            4789999999999999999865 2  3568888886432111111111 11111221 1112   1       1222369


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHh
Q 024145           91 DIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARV  136 (272)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  136 (272)
                      |++|.++|....+     ..   .-.+.+..|....-.+++.+.++
T Consensus        71 DiVIitaG~~~~~-----~~---~R~dll~~N~~i~~~ii~~i~~~  108 (312)
T PRK05086         71 DVVLISAGVARKP-----GM---DRSDLFNVNAGIVKNLVEKVAKT  108 (312)
T ss_pred             CEEEEcCCCCCCC-----CC---CHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999975431     11   23445677776666666655543

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.39  E-value=0.00041  Score=59.58  Aligned_cols=76  Identities=16%  Similarity=0.251  Sum_probs=64.3

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEe
Q 024145           16 KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYN   95 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~   95 (272)
                      ..++|-||+|..|.-++++|+++|.+-.+.+|+..++..+...++.+...+.+++  ++.++++++       ..++|+|
T Consensus         7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~~~~~~p~~~--p~~~~~~~~-------~~~VVln   77 (382)
T COG3268           7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGPEAAVFPLGV--PAALEAMAS-------RTQVVLN   77 (382)
T ss_pred             eeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCccccccCCCC--HHHHHHHHh-------cceEEEe
Confidence            4689999999999999999999999999999999999999999987766666655  666665555       6799999


Q ss_pred             CCCCC
Q 024145           96 NAGIL  100 (272)
Q Consensus        96 ~ag~~  100 (272)
                      ++|-.
T Consensus        78 cvGPy   82 (382)
T COG3268          78 CVGPY   82 (382)
T ss_pred             ccccc
Confidence            99853

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=97.38  E-value=0.0011  Score=58.29  Aligned_cols=77  Identities=29%  Similarity=0.469  Sum_probs=55.0

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhC--CccE
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFG--KLDI   92 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g--~id~   92 (272)
                      |+++||+||+||+|...++-....|++++++..+.++.+ ..++++.....   |-.+.+    +.+++++..+  .+|+
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~lGAd~vi---~y~~~~----~~~~v~~~t~g~gvDv  214 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLKELGADHVI---NYREED----FVEQVRELTGGKGVDV  214 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHhcCCCEEE---cCCccc----HHHHHHHHcCCCCceE
Confidence            899999999999999988888888987777776666666 77777754222   222222    3455555443  5999


Q ss_pred             EEeCCCC
Q 024145           93 MYNNAGI   99 (272)
Q Consensus        93 lv~~ag~   99 (272)
                      ++...|.
T Consensus       215 v~D~vG~  221 (326)
T COG0604         215 VLDTVGG  221 (326)
T ss_pred             EEECCCH
Confidence            9999884

>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]

Probab=97.38  E-value=0.03  Score=47.45  Aligned_cols=238  Identities=15%  Similarity=0.077  Sum_probs=134.1

Q ss_pred             cEEEEeCCCChHHHHHHHHHHH-cCCeEEEee-------cCcc--------hHHHHHHHhCCceEEEEecCCCHHHHHHH
Q 024145           16 KVAIITGGASGIGAMAVELFHE-NGAKVVIAD-------VQDK--------LGEDLADKLGQDVCYIHCDISNEDEVINL   79 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~-~G~~V~~~~-------r~~~--------~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   79 (272)
                      |+|||.|+|+|.|++.--..+= .|++.+.+.       +++.        ...+..++-+--..-+..|.-+.+--++.
T Consensus        42 KkVLviGaSsGyGLa~RIsaaFG~gAdTiGVffE~pgte~~~gtagwyn~~~f~~~A~~kGlyAksingDaFS~e~k~kv  121 (398)
T COG3007          42 KKVLVIGASSGYGLAARISAAFGPGADTIGVFFERPGTERKPGTAGWYNNAAFKKFAKQKGLYAKSINGDAFSDEMKQKV  121 (398)
T ss_pred             ceEEEEecCCcccHHHHHHHHhCCCCceeeEEeecCCccCCCcchhhhHHHHHHHHHHhcCceeeecccchhhHHHHHHH
Confidence            8999999999999873222221 356655543       2111        12233333343455667799888888999


Q ss_pred             HHHHHHHhCCccEEEeCCCCCCCC-C--C-----------------------------CCCCCCHHHHHHHHHHHhHH-H
Q 024145           80 VDTAVSKFGKLDIMYNNAGILDRS-F--G-----------------------------SILDTPKSDLERLINVNTIG-G  126 (272)
Q Consensus        80 ~~~~~~~~g~id~lv~~ag~~~~~-~--~-----------------------------~~~~~~~~~~~~~~~~n~~~-~  126 (272)
                      ++.++..+|.+|.+|+.-+-..+. +  +                             .+...+.+++.....+.--- .
T Consensus       122 Ie~Ik~~~g~vDlvvYSlAsp~Rk~pktgev~~SalKpIg~a~~~~~ldt~kd~i~e~~lepAseqEI~~Tv~VMGGeDW  201 (398)
T COG3007         122 IEAIKQDFGKVDLVVYSLASPRRKHPKTGEVFRSALKPIGEAVSGRTLDTEKDVIIEATLEPASEQEIADTVAVMGGEDW  201 (398)
T ss_pred             HHHHHHhhccccEEEEeccCccccCCCcchhhHhhhcchhhhccccccccccceeeeeecccccHHHHHHHHHhhCcchH
Confidence            999999999999998865533221 0  0                             01123344444443332111 1


Q ss_pred             HHHHHHHHHhhcCCCCceEEEEecccccccCC--CCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCC
Q 024145          127 FLGAKHAARVMVPQQKGCILFTASACTEIAGL--GSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKG  204 (272)
Q Consensus       127 ~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~--~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~  204 (272)
                      -.++.+++..-.-..+.+-|..|-++....++  ....-+.+|.=++.-++.+...++..|=..++.-.-.+-|..+...
T Consensus       202 q~WidaLl~advlaeg~kTiAfsYiG~~iT~~IYw~GtiG~AK~DLd~~~~~inekLa~~gG~A~vsVlKavVTqASsaI  281 (398)
T COG3007         202 QMWIDALLEADVLAEGAKTIAFSYIGEKITHPIYWDGTIGRAKKDLDQKSLAINEKLAALGGGARVSVLKAVVTQASSAI  281 (398)
T ss_pred             HHHHHHHHhccccccCceEEEEEecCCccccceeeccccchhhhcHHHHHHHHHHHHHhcCCCeeeeehHHHHhhhhhcc
Confidence            24455555543334556677776665544333  3346789999999999999998887654555444433333333222


Q ss_pred             CCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccccEEEecCceee
Q 024145          205 GVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSV  259 (272)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~  259 (272)
                      ...+.-+.-.++.+    ..-.+-|.+.+-+..|.++.  ...|+.+.+|.--.+
T Consensus       282 P~~plYla~lfkvM----Kekg~HEgcIeQi~rlfse~--ly~g~~~~~D~e~rl  330 (398)
T COG3007         282 PMMPLYLAILFKVM----KEKGTHEGCIEQIDRLFSEK--LYSGSKIQLDDEGRL  330 (398)
T ss_pred             ccccHHHHHHHHHH----HHcCcchhHHHHHHHHHHHH--hhCCCCCCcCccccc
Confidence            12222222222221    22345677777777777653  234777777655443

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=97.36  E-value=0.0033  Score=51.47  Aligned_cols=201  Identities=13%  Similarity=0.078  Sum_probs=122.2

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      .+++-.+.++.|+.+..|.++++.-...|..|.++.|+..  ..+.+.-...+.+.+.|.....-.+...       .++
T Consensus        48 ~dve~e~tlvlggnpfsgs~vlk~A~~vv~svgilsen~~--k~~l~sw~~~vswh~gnsfssn~~k~~l-------~g~  118 (283)
T KOG4288|consen   48 QDVEVEWTLVLGGNPFSGSEVLKNATNVVHSVGILSENEN--KQTLSSWPTYVSWHRGNSFSSNPNKLKL-------SGP  118 (283)
T ss_pred             hhhhHHHHhhhcCCCcchHHHHHHHHhhceeeeEeecccC--cchhhCCCcccchhhccccccCcchhhh-------cCC
Confidence            3444457899999999999999999999999999888765  2344444556777777765433222111       145


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccc-cccCCCCchhhhhHHH
Q 024145           91 DIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACT-EIAGLGSPAYTISKYG  169 (272)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~-~~~~~~~~~Y~~sK~a  169 (272)
                      ..++-+.|....            ...+..+|-.......+++..    .+-.++++||.... ..+... ..|=-+|.+
T Consensus       119 t~v~e~~ggfgn------------~~~m~~ing~ani~a~kaa~~----~gv~~fvyISa~d~~~~~~i~-rGY~~gKR~  181 (283)
T KOG4288|consen  119 TFVYEMMGGFGN------------IILMDRINGTANINAVKAAAK----AGVPRFVYISAHDFGLPPLIP-RGYIEGKRE  181 (283)
T ss_pred             cccHHHhcCccc------------hHHHHHhccHhhHHHHHHHHH----cCCceEEEEEhhhcCCCCccc-hhhhccchH
Confidence            555556654322            234455566666666666654    45677999988654 333333 379999988


Q ss_pred             HHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCCh-----hHHHHHHhhc-------C---CCCCCCCChHhHHHH
Q 024145          170 ILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDP-----ALIESSMSQM-------G---NLKGEFLKTDGIANA  234 (272)
Q Consensus       170 ~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~-----~~~~~~~~~~-------~---~~~~~~~~~~dva~~  234 (272)
                      .|.   .+-.   ..+.+-..++||++.....-.....+     +.+....+..       +   ++...-...|+||.+
T Consensus       182 AE~---Ell~---~~~~rgiilRPGFiyg~R~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg~l~~ppvnve~VA~a  255 (283)
T KOG4288|consen  182 AEA---ELLK---KFRFRGIILRPGFIYGTRNVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLGPLLAPPVNVESVALA  255 (283)
T ss_pred             HHH---HHHH---hcCCCceeeccceeecccccCcccccHHhhhhhHHHHHHhhhchhhcCcccccccCCCcCHHHHHHH
Confidence            876   2222   23456678899999877322111111     1122222211       1   112233456999999


Q ss_pred             HHHHhcCCC
Q 024145          235 ALYLASDES  243 (272)
Q Consensus       235 ~~~l~s~~~  243 (272)
                      ++..+++++
T Consensus       256 al~ai~dp~  264 (283)
T KOG4288|consen  256 ALKAIEDPD  264 (283)
T ss_pred             HHHhccCCC
Confidence            998887764

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=97.35  E-value=0.00042  Score=56.49  Aligned_cols=49  Identities=31%  Similarity=0.502  Sum_probs=42.1

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhC
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLG   60 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~   60 (272)
                      .+++||+++|+|.. .+|+.+++.|.+.|++|++.+++++..+++.+.++
T Consensus        24 ~~l~gk~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g   72 (200)
T cd01075          24 DSLEGKTVAVQGLG-KVGYKLAEHLLEEGAKLIVADINEEAVARAAELFG   72 (200)
T ss_pred             CCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcC
Confidence            46899999999985 89999999999999999999998877776666543

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.34  E-value=0.00092  Score=57.52  Aligned_cols=48  Identities=25%  Similarity=0.328  Sum_probs=42.1

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHHHHHHHhC
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGEDLADKLG   60 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~   60 (272)
                      ++++|+++|.|+ ||.|++++..|++.|+ +|++++|+.++.+.+.+.++
T Consensus       124 ~~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~  172 (284)
T PRK12549        124 DASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELN  172 (284)
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHH
Confidence            467899999996 7899999999999997 69999999998888877663

>PRK06849 hypothetical protein; Provisional

Probab=97.33  E-value=0.0015  Score=58.89  Aligned_cols=83  Identities=19%  Similarity=0.258  Sum_probs=55.0

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      +.|+|||||++..+|..+++.|.+.|++|++++.++.......+.. .....+...-.+.+...+.+.++.++. ++|++
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~-d~~~~~p~p~~d~~~~~~~L~~i~~~~-~id~v   80 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFSRAV-DGFYTIPSPRWDPDAYIQALLSIVQRE-NIDLL   80 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhh-hheEEeCCCCCCHHHHHHHHHHHHHHc-CCCEE
Confidence            4589999999999999999999999999999988765433222222 222223222334444444444455544 58999


Q ss_pred             EeCCC
Q 024145           94 YNNAG   98 (272)
Q Consensus        94 v~~ag   98 (272)
                      |-...
T Consensus        81 IP~~e   85 (389)
T PRK06849         81 IPTCE   85 (389)
T ss_pred             EECCh
Confidence            87665

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=97.32  E-value=0.0016  Score=56.78  Aligned_cols=79  Identities=24%  Similarity=0.389  Sum_probs=57.8

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      .+++++|+|+++++|.++++.+...|++|++++++++..+.+ ...+..   ..+|..+.+..+.+......  .++|++
T Consensus       166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~--~~~d~~  239 (342)
T cd08266         166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERA-KELGAD---YVIDYRKEDFVREVRELTGK--RGVDVV  239 (342)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCC---eEEecCChHHHHHHHHHhCC--CCCcEE
Confidence            578999999999999999999999999999998887765544 334322   22466666555554443322  369999


Q ss_pred             EeCCC
Q 024145           94 YNNAG   98 (272)
Q Consensus        94 v~~ag   98 (272)
                      ++++|
T Consensus       240 i~~~g  244 (342)
T cd08266         240 VEHVG  244 (342)
T ss_pred             EECCc
Confidence            99987

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=97.29  E-value=0.0013  Score=57.77  Aligned_cols=80  Identities=21%  Similarity=0.344  Sum_probs=54.2

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      .|.++||+||+|++|..+++.+...|++|+.+.+++++.+.+.+.++... +  .|-.+.++..+.+.+...  +++|++
T Consensus       151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~-v--i~~~~~~~~~~~i~~~~~--~gvd~v  225 (338)
T cd08295         151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDD-A--FNYKEEPDLDAALKRYFP--NGIDIY  225 (338)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCce-e--EEcCCcccHHHHHHHhCC--CCcEEE
Confidence            57899999999999999998888889999998888776665554465422 1  222222233222222221  369999


Q ss_pred             EeCCC
Q 024145           94 YNNAG   98 (272)
Q Consensus        94 v~~ag   98 (272)
                      +.+.|
T Consensus       226 ~d~~g  230 (338)
T cd08295         226 FDNVG  230 (338)
T ss_pred             EECCC
Confidence            98876

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=97.26  E-value=0.0092  Score=45.75  Aligned_cols=110  Identities=19%  Similarity=0.239  Sum_probs=69.2

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCC--eEEEeecCcchHHHHHHHhC-----C-ceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145           17 VAIITGGASGIGAMAVELFHENGA--KVVIADVQDKLGEDLADKLG-----Q-DVCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~-----~-~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      ++.|+|++|.+|.+++..|...+.  ++++.+++++..+....++.     . .-..+..  .+.++           ..
T Consensus         2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~--~~~~~-----------~~   68 (141)
T PF00056_consen    2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS--GDYEA-----------LK   68 (141)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE--SSGGG-----------GT
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc--ccccc-----------cc
Confidence            689999999999999999999974  79999999776554443331     1 1112222  33332           23


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEec
Q 024145           89 KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTAS  150 (272)
Q Consensus        89 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss  150 (272)
                      ..|++|..+|....+     ..+   -.+.++.|..-.-.+.+.+.++-   ..+.++.+|-
T Consensus        69 ~aDivvitag~~~~~-----g~s---R~~ll~~N~~i~~~~~~~i~~~~---p~~~vivvtN  119 (141)
T PF00056_consen   69 DADIVVITAGVPRKP-----GMS---RLDLLEANAKIVKEIAKKIAKYA---PDAIVIVVTN  119 (141)
T ss_dssp             TESEEEETTSTSSST-----TSS---HHHHHHHHHHHHHHHHHHHHHHS---TTSEEEE-SS
T ss_pred             cccEEEEeccccccc-----ccc---HHHHHHHhHhHHHHHHHHHHHhC---CccEEEEeCC
Confidence            689999999975431     122   34456667666555555554432   4566666654

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=97.26  E-value=0.0021  Score=56.29  Aligned_cols=145  Identities=13%  Similarity=0.055  Sum_probs=87.6

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCC-------eEEEeecCcch--HHHHHHHhCCce----EEEEecCCCHHHHHHHHHH
Q 024145           16 KVAIITGGASGIGAMAVELFHENGA-------KVVIADVQDKL--GEDLADKLGQDV----CYIHCDISNEDEVINLVDT   82 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~-------~V~~~~r~~~~--~~~~~~~~~~~~----~~~~~D~~~~~~~~~~~~~   82 (272)
                      +++.|+|++|.+|.+++..|+..|.       ++++.+.++..  ++...-++....    .-+...-.+          
T Consensus         3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~~~----------   72 (322)
T cd01338           3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVITDDP----------   72 (322)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEecCc----------
Confidence            5899999999999999999998874       69999885432  221111111000    000111111          


Q ss_pred             HHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCC--CCceEEEEecccc-------
Q 024145           83 AVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQ--QKGCILFTASACT-------  153 (272)
Q Consensus        83 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~g~iv~iss~~~-------  153 (272)
                       .+.+.+.|++|..||....   +  ..+.   .+.++.|+.-.    +.+.+.+.+.  +.+.+|.+|-..-       
T Consensus        73 -~~~~~daDivvitaG~~~k---~--g~tR---~dll~~N~~i~----~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~~  139 (322)
T cd01338          73 -NVAFKDADWALLVGAKPRG---P--GMER---ADLLKANGKIF----TAQGKALNDVASRDVKVLVVGNPCNTNALIAM  139 (322)
T ss_pred             -HHHhCCCCEEEEeCCCCCC---C--CCcH---HHHHHHHHHHH----HHHHHHHHhhCCCCeEEEEecCcHHHHHHHHH
Confidence             2223478999999997532   1  2222   33456665544    4444444333  2677777765321       


Q ss_pred             -ccc-CCCCchhhhhHHHHHHHHHHHHHHhcC
Q 024145          154 -EIA-GLGSPAYTISKYGILGLVKCLAAELGQ  183 (272)
Q Consensus       154 -~~~-~~~~~~Y~~sK~a~~~~~~~la~e~~~  183 (272)
                       ..+ .|....|+.++.--..|...+++.+.-
T Consensus       140 k~sg~~p~~~ViG~t~LDs~Rl~~~la~~lgv  171 (322)
T cd01338         140 KNAPDIPPDNFTAMTRLDHNRAKSQLAKKAGV  171 (322)
T ss_pred             HHcCCCChHheEEehHHHHHHHHHHHHHHhCc
Confidence             122 566668999999999999999998753

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.25  E-value=0.0098  Score=51.78  Aligned_cols=110  Identities=16%  Similarity=0.181  Sum_probs=68.4

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcC--CeEEEeecCcchHHHHHHHhC-------CceEEEEecCCCHHHHHHHHHHHHHH
Q 024145           16 KVAIITGGASGIGAMAVELFHENG--AKVVIADVQDKLGEDLADKLG-------QDVCYIHCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G--~~V~~~~r~~~~~~~~~~~~~-------~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (272)
                      +++.|.|+ |++|++++..|+..|  .+|++++++++..+....++.       ...... .  .+.++           
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~-~--~~~~~-----------   65 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIK-A--GDYSD-----------   65 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEE-c--CCHHH-----------
Confidence            36788896 999999999999999  579999998887766655441       122222 1  22221           


Q ss_pred             hCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecc
Q 024145           87 FGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASA  151 (272)
Q Consensus        87 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~  151 (272)
                      ....|++|+.+|....+     ..+.   .+.++.|..-...+.+.+.++   ...+.++++|-.
T Consensus        66 l~~aDIVIitag~~~~~-----g~~R---~dll~~N~~i~~~~~~~i~~~---~~~~~vivvsNP  119 (306)
T cd05291          66 CKDADIVVITAGAPQKP-----GETR---LDLLEKNAKIMKSIVPKIKAS---GFDGIFLVASNP  119 (306)
T ss_pred             hCCCCEEEEccCCCCCC-----CCCH---HHHHHHHHHHHHHHHHHHHHh---CCCeEEEEecCh
Confidence            13789999999975331     1222   244555555444444443332   346777777654

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=97.24  E-value=0.0022  Score=58.73  Aligned_cols=81  Identities=23%  Similarity=0.280  Sum_probs=57.0

Q ss_pred             CCCCCcEEEEeCC----------------CChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHH
Q 024145           11 KRLEGKVAIITGG----------------ASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNED   74 (272)
Q Consensus        11 ~~l~~k~vlItGa----------------s~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~   74 (272)
                      .+|+||++|||+|                ||-.|.++|+++..+|++|+++.-....      ..+..+.++.  +.+.+
T Consensus       252 ~~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~~------~~p~~v~~i~--V~ta~  323 (475)
T PRK13982        252 KPLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVDL------ADPQGVKVIH--VESAR  323 (475)
T ss_pred             cccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcCC------CCCCCceEEE--ecCHH
Confidence            4689999999976                5789999999999999999988743221      1233444443  33444


Q ss_pred             HHHHHHHHHHHHhCCccEEEeCCCCCCCC
Q 024145           75 EVINLVDTAVSKFGKLDIMYNNAGILDRS  103 (272)
Q Consensus        75 ~~~~~~~~~~~~~g~id~lv~~ag~~~~~  103 (272)
                      +   +.+.+.+.+. .|++|++|++.+..
T Consensus       324 e---M~~av~~~~~-~Di~I~aAAVaDyr  348 (475)
T PRK13982        324 Q---MLAAVEAALP-ADIAIFAAAVADWR  348 (475)
T ss_pred             H---HHHHHHhhCC-CCEEEEecccccee
Confidence            4   4455555554 79999999987653

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=97.21  E-value=0.0021  Score=55.38  Aligned_cols=79  Identities=27%  Similarity=0.443  Sum_probs=55.5

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      .+++++|+|+++++|.++++.+...|++|+++.++++..+.+ ++.+..   ..+|..+.+..+.+.... . .+++|++
T Consensus       139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~---~~~~~~~~~~~~~~~~~~-~-~~~~d~v  212 (323)
T cd05276         139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC-RALGAD---VAINYRTEDFAEEVKEAT-G-GRGVDVI  212 (323)
T ss_pred             CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHcCCC---EEEeCCchhHHHHHHHHh-C-CCCeEEE
Confidence            678999999999999999999999999999999887766555 444432   224444444333332221 1 1369999


Q ss_pred             EeCCC
Q 024145           94 YNNAG   98 (272)
Q Consensus        94 v~~ag   98 (272)
                      +++.|
T Consensus       213 i~~~g  217 (323)
T cd05276         213 LDMVG  217 (323)
T ss_pred             EECCc
Confidence            99987

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>cd08293 PTGR2 Prostaglandin reductase

Probab=97.18  E-value=0.0022  Score=56.48  Aligned_cols=77  Identities=22%  Similarity=0.341  Sum_probs=52.7

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEE
Q 024145           16 KVAIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMY   94 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv   94 (272)
                      +++||+||+|++|.++++.....|+ +|+.+.+++++.+.+.++++....   .|..+ +++.+.+.++..  +++|+++
T Consensus       156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~v---i~~~~-~~~~~~i~~~~~--~gvd~vi  229 (345)
T cd08293         156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAA---INYKT-DNVAERLRELCP--EGVDVYF  229 (345)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEE---EECCC-CCHHHHHHHHCC--CCceEEE
Confidence            7999999999999998887777898 799998887776666555665322   22222 222222222221  3699999


Q ss_pred             eCCC
Q 024145           95 NNAG   98 (272)
Q Consensus        95 ~~ag   98 (272)
                      .+.|
T Consensus       230 d~~g  233 (345)
T cd08293         230 DNVG  233 (345)
T ss_pred             ECCC
Confidence            8887

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=97.18  E-value=0.0018  Score=56.58  Aligned_cols=79  Identities=24%  Similarity=0.357  Sum_probs=53.9

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      .|.++||+|++|++|..+++.+...|++|+.+.+++++.+.+ ++++....   .|-.+.+++.+.+.....  +++|++
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~-~~lGa~~v---i~~~~~~~~~~~~~~~~~--~gvdvv  211 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYL-KKLGFDVA---FNYKTVKSLEETLKKASP--DGYDCY  211 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCCEE---EeccccccHHHHHHHhCC--CCeEEE
Confidence            578999999999999999888878899999998887665544 55664322   222232233333333221  369999


Q ss_pred             EeCCC
Q 024145           94 YNNAG   98 (272)
Q Consensus        94 v~~ag   98 (272)
                      +.+.|
T Consensus       212 ~d~~G  216 (325)
T TIGR02825       212 FDNVG  216 (325)
T ss_pred             EECCC
Confidence            98887

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=97.16  E-value=0.0021  Score=57.01  Aligned_cols=80  Identities=20%  Similarity=0.333  Sum_probs=54.1

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      .|.++||+|++|++|..+++.+...|++|+.+++++++.+.+.++++....   .|-.+.+++.+.+.+...  +++|++
T Consensus       158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa~~v---i~~~~~~~~~~~i~~~~~--~gvD~v  232 (348)
T PLN03154        158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEA---FNYKEEPDLDAALKRYFP--EGIDIY  232 (348)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCCCEE---EECCCcccHHHHHHHHCC--CCcEEE
Confidence            578999999999999999888888899999888877766555445664322   222222223322222211  369999


Q ss_pred             EeCCC
Q 024145           94 YNNAG   98 (272)
Q Consensus        94 v~~ag   98 (272)
                      +.+.|
T Consensus       233 ~d~vG  237 (348)
T PLN03154        233 FDNVG  237 (348)
T ss_pred             EECCC
Confidence            99887

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=97.16  E-value=0.0018  Score=59.88  Aligned_cols=73  Identities=18%  Similarity=0.272  Sum_probs=53.4

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      .++++|+++|+|+ ||+|++++..|++.|++|++.+|+.+..+++.+..+...    .+.   ++..        .....
T Consensus       328 ~~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~~~~~----~~~---~~~~--------~l~~~  391 (477)
T PRK09310        328 IPLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASRCQGKA----FPL---ESLP--------ELHRI  391 (477)
T ss_pred             CCcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccce----ech---hHhc--------ccCCC
Confidence            3568899999996 799999999999999999999998877777766543211    111   1111        12468


Q ss_pred             cEEEeCCCC
Q 024145           91 DIMYNNAGI   99 (272)
Q Consensus        91 d~lv~~ag~   99 (272)
                      |++|++...
T Consensus       392 DiVInatP~  400 (477)
T PRK09310        392 DIIINCLPP  400 (477)
T ss_pred             CEEEEcCCC
Confidence            999999854

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=97.15  E-value=0.0026  Score=58.01  Aligned_cols=74  Identities=24%  Similarity=0.456  Sum_probs=55.4

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      ++.+++++|.|+ |.+|+.+++.|...|+ +|++++|+.+..+.+.+..+..       ..+.++....+       ...
T Consensus       179 ~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~-------~~~~~~~~~~l-------~~a  243 (423)
T PRK00045        179 DLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGE-------AIPLDELPEAL-------AEA  243 (423)
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc-------EeeHHHHHHHh-------ccC
Confidence            478899999986 9999999999999997 7999999988887777776531       11223332222       257


Q ss_pred             cEEEeCCCCC
Q 024145           91 DIMYNNAGIL  100 (272)
Q Consensus        91 d~lv~~ag~~  100 (272)
                      |++|.+.|..
T Consensus       244 DvVI~aT~s~  253 (423)
T PRK00045        244 DIVISSTGAP  253 (423)
T ss_pred             CEEEECCCCC
Confidence            9999988753

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=97.14  E-value=0.011  Score=54.83  Aligned_cols=111  Identities=18%  Similarity=0.198  Sum_probs=70.8

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCH-------------HHHHHH
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNE-------------DEVINL   79 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~-------------~~~~~~   79 (272)
                      ..+.+|+|+| .|.+|...+..+...|++|+++++++++.+.. ++++..+.  ..|..+.             +..++.
T Consensus       163 ~pg~kVlViG-aG~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~a-eslGA~~v--~i~~~e~~~~~~gya~~~s~~~~~~~  238 (509)
T PRK09424        163 VPPAKVLVIG-AGVAGLAAIGAAGSLGAIVRAFDTRPEVAEQV-ESMGAEFL--ELDFEEEGGSGDGYAKVMSEEFIKAE  238 (509)
T ss_pred             cCCCEEEEEC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCCeEE--EeccccccccccchhhhcchhHHHHH
Confidence            4578999999 57999999999999999999999998876644 44665533  2333221             112222


Q ss_pred             HHHHHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEec
Q 024145           80 VDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTAS  150 (272)
Q Consensus        80 ~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss  150 (272)
                      .+.+.+..+..|++|.++|....+ .                    +..+++..+..|  ++.|+|+.++.
T Consensus       239 ~~~~~~~~~gaDVVIetag~pg~~-a--------------------P~lit~~~v~~m--kpGgvIVdvg~  286 (509)
T PRK09424        239 MALFAEQAKEVDIIITTALIPGKP-A--------------------PKLITAEMVASM--KPGSVIVDLAA  286 (509)
T ss_pred             HHHHHhccCCCCEEEECCCCCccc-C--------------------cchHHHHHHHhc--CCCCEEEEEcc
Confidence            222233335799999999975421 0                    222234455555  36688888876

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=97.14  E-value=0.0032  Score=54.84  Aligned_cols=75  Identities=27%  Similarity=0.437  Sum_probs=51.7

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      .+.+++|+|+++++|.++++.+...|++|+.+.++++..+.+ +..+.. .++  |.   ++..   +.+. +...+|++
T Consensus       162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~~~~-~~~--~~---~~~~---~~~~-~~~~~d~v  230 (332)
T cd08259         162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKIL-KELGAD-YVI--DG---SKFS---EDVK-KLGGADVV  230 (332)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH-HHcCCc-EEE--ec---HHHH---HHHH-hccCCCEE
Confidence            568999999999999999999999999999988877665544 434321 111  22   1122   2222 22379999


Q ss_pred             EeCCCC
Q 024145           94 YNNAGI   99 (272)
Q Consensus        94 v~~ag~   99 (272)
                      ++++|.
T Consensus       231 ~~~~g~  236 (332)
T cd08259         231 IELVGS  236 (332)
T ss_pred             EECCCh
Confidence            999873

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=97.12  E-value=0.0019  Score=54.66  Aligned_cols=74  Identities=9%  Similarity=0.181  Sum_probs=55.0

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEe
Q 024145           16 KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYN   95 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~   95 (272)
                      +++||+|||+- |+.+++.|.++|++|+...+++...+.+.+ .  ....+..+..+.+++.+++.+-     ++|.||+
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~-~--g~~~v~~g~l~~~~l~~~l~~~-----~i~~VID   71 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPI-H--QALTVHTGALDPQELREFLKRH-----SIDILVD   71 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccc-c--CCceEEECCCCHHHHHHHHHhc-----CCCEEEE
Confidence            36899999998 999999999999999998887764433322 1  1234557777888876666532     7999998


Q ss_pred             CCC
Q 024145           96 NAG   98 (272)
Q Consensus        96 ~ag   98 (272)
                      .+-
T Consensus        72 AtH   74 (256)
T TIGR00715        72 ATH   74 (256)
T ss_pred             cCC
Confidence            774

This enzyme was found to be a monomer by gel filtration.

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=97.07  E-value=0.0042  Score=53.53  Aligned_cols=80  Identities=14%  Similarity=0.293  Sum_probs=51.8

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcc---hHHHHHHHhCCce--EEEEecCCCHHHHHHHHHHHHH
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQDK---LGEDLADKLGQDV--CYIHCDISNEDEVINLVDTAVS   85 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~---~~~~~~~~~~~~~--~~~~~D~~~~~~~~~~~~~~~~   85 (272)
                      ++++|+++|.|+ ||-+++++..|+..|. +|.++.|+.+   +.+++.+.++...  .....++.+.+.+       .+
T Consensus       121 ~~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~~~~l-------~~  192 (288)
T PRK12749        121 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAF-------AE  192 (288)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhhhhhh-------hh
Confidence            468899999996 7779999999999997 6999999853   6666666654321  1111122111111       11


Q ss_pred             HhCCccEEEeCCCC
Q 024145           86 KFGKLDIMYNNAGI   99 (272)
Q Consensus        86 ~~g~id~lv~~ag~   99 (272)
                      .....|+|||+...
T Consensus       193 ~~~~aDivINaTp~  206 (288)
T PRK12749        193 ALASADILTNGTKV  206 (288)
T ss_pred             hcccCCEEEECCCC
Confidence            22368999997754

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.05  E-value=0.0033  Score=54.19  Aligned_cols=43  Identities=16%  Similarity=0.191  Sum_probs=37.5

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHH
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGED   54 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~   54 (272)
                      .+++||+++|+|. |++|+++++.|...|++|++.+|+++..+.
T Consensus       147 ~~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~  189 (287)
T TIGR02853       147 FTIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLAR  189 (287)
T ss_pred             CCCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence            4688999999998 779999999999999999999998765443

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.05  E-value=0.012  Score=54.43  Aligned_cols=87  Identities=20%  Similarity=0.174  Sum_probs=55.5

Q ss_pred             CCCCCC-CccCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcc-hHHHHHHHh-CCceEEEEecCCCHHHHH
Q 024145            1 MNGPSS-AAPFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDK-LGEDLADKL-GQDVCYIHCDISNEDEVI   77 (272)
Q Consensus         1 m~~~~~-~~~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~-~~~~~~~~~-~~~~~~~~~D~~~~~~~~   77 (272)
                      |++|+. ...-.++++|+++|.|+ |++|.++++.|.++|++|.++++++. ......+.+ ...+.++..+-..     
T Consensus         1 ~~~~~~~~~~~~~~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~~-----   74 (480)
T PRK01438          1 MSRPPGLTSWHSDWQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALGATVRLGPGPT-----   74 (480)
T ss_pred             CCcccchhhcccCcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEEEECCCcc-----
Confidence            555553 22345678899999996 78999999999999999999986543 222222222 1234443322111     


Q ss_pred             HHHHHHHHHhCCccEEEeCCCCCC
Q 024145           78 NLVDTAVSKFGKLDIMYNNAGILD  101 (272)
Q Consensus        78 ~~~~~~~~~~g~id~lv~~ag~~~  101 (272)
                              .....|.+|...|+..
T Consensus        75 --------~~~~~D~Vv~s~Gi~~   90 (480)
T PRK01438         75 --------LPEDTDLVVTSPGWRP   90 (480)
T ss_pred             --------ccCCCCEEEECCCcCC
Confidence                    0125899999999753

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=97.04  E-value=0.0039  Score=56.65  Aligned_cols=74  Identities=26%  Similarity=0.483  Sum_probs=55.9

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcC-CeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENG-AKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      ++.+++++|.|+ |.+|..+++.|...| .+|++++|+.+..+++.+.++..  .+.     .++..+.+.       ..
T Consensus       177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~--~i~-----~~~l~~~l~-------~a  241 (417)
T TIGR01035       177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGE--AVK-----FEDLEEYLA-------EA  241 (417)
T ss_pred             CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCe--Eee-----HHHHHHHHh-------hC
Confidence            578899999997 999999999999999 67999999988877777766542  221     233333332       58


Q ss_pred             cEEEeCCCCC
Q 024145           91 DIMYNNAGIL  100 (272)
Q Consensus        91 d~lv~~ag~~  100 (272)
                      |++|.+.+..
T Consensus       242 DvVi~aT~s~  251 (417)
T TIGR01035       242 DIVISSTGAP  251 (417)
T ss_pred             CEEEECCCCC
Confidence            9999998754

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=97.01  E-value=0.015  Score=50.80  Aligned_cols=114  Identities=14%  Similarity=0.155  Sum_probs=70.1

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCC--eEEEeecCcchHHHHHHHhCC------ceEEEEecCCCHHHHHHHHHHH
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGA--KVVIADVQDKLGEDLADKLGQ------DVCYIHCDISNEDEVINLVDTA   83 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~------~~~~~~~D~~~~~~~~~~~~~~   83 (272)
                      +-.++++.|+|+ |++|.+++..|+..|.  ++++.+++++.++....++..      .+.. ..  .+.++        
T Consensus         3 ~~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i-~~--~~~~~--------   70 (315)
T PRK00066          3 KKQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKI-YA--GDYSD--------   70 (315)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEE-Ee--CCHHH--------
Confidence            346679999998 9999999999999986  799999988766544443321      2211 11  12222        


Q ss_pred             HHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecc
Q 024145           84 VSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASA  151 (272)
Q Consensus        84 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~  151 (272)
                         +...|++|..+|....+     ..+.   .+.++.|..-...+.+.+..+   ...+.++.+|-.
T Consensus        71 ---~~~adivIitag~~~k~-----g~~R---~dll~~N~~i~~~i~~~i~~~---~~~~~vivvsNP  124 (315)
T PRK00066         71 ---CKDADLVVITAGAPQKP-----GETR---LDLVEKNLKIFKSIVGEVMAS---GFDGIFLVASNP  124 (315)
T ss_pred             ---hCCCCEEEEecCCCCCC-----CCCH---HHHHHHHHHHHHHHHHHHHHh---CCCeEEEEccCc
Confidence               23789999999975431     1222   244555555444433333322   246777777654

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=96.99  E-value=0.0027  Score=54.31  Aligned_cols=78  Identities=21%  Similarity=0.332  Sum_probs=56.2

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHHHHHHHhCCceEEE-EecCCCHHHHHHHHHHHHHHhCC
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGEDLADKLGQDVCYI-HCDISNEDEVINLVDTAVSKFGK   89 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~-~~D~~~~~~~~~~~~~~~~~~g~   89 (272)
                      +.+|++++|.| +||.+++++.+|++.|+ +|+++.|+.++.+++.+..+.....+ ..+..+.+..+           .
T Consensus       123 ~~~~~~vlilG-AGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~~~~~~-----------~  190 (283)
T COG0169         123 DVTGKRVLILG-AGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAALADLEGLE-----------E  190 (283)
T ss_pred             ccCCCEEEEEC-CcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccccccccccccccc-----------c
Confidence            44689999999 57999999999999995 79999999999988887765332111 12222222211           4


Q ss_pred             ccEEEeCCCCCC
Q 024145           90 LDIMYNNAGILD  101 (272)
Q Consensus        90 id~lv~~ag~~~  101 (272)
                      .|++||+....-
T Consensus       191 ~dliINaTp~Gm  202 (283)
T COG0169         191 ADLLINATPVGM  202 (283)
T ss_pred             cCEEEECCCCCC
Confidence            799999887643

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.98  E-value=0.0035  Score=49.50  Aligned_cols=38  Identities=21%  Similarity=0.361  Sum_probs=34.4

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecC
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQ   48 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~   48 (272)
                      .++.||+++|.|++.-+|..+++.|.++|++|.++.|+
T Consensus        40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~   77 (168)
T cd01080          40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSK   77 (168)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECC
Confidence            46899999999997778999999999999999988876

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.97  E-value=0.005  Score=53.72  Aligned_cols=73  Identities=27%  Similarity=0.544  Sum_probs=55.1

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcC-CeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENG-AKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      ++.+++++|.|+ |.+|+.+++.|.+.| .+|++++|+.++.+++.++++..  .+     +.+++.+.+.       ..
T Consensus       175 ~l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~~--~~-----~~~~~~~~l~-------~a  239 (311)
T cd05213         175 NLKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKELGGN--AV-----PLDELLELLN-------EA  239 (311)
T ss_pred             CccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCCe--EE-----eHHHHHHHHh-------cC
Confidence            368899999997 999999999999877 46889999988888888877642  22     2233333332       57


Q ss_pred             cEEEeCCCC
Q 024145           91 DIMYNNAGI   99 (272)
Q Consensus        91 d~lv~~ag~   99 (272)
                      |++|.+.+.
T Consensus       240 DvVi~at~~  248 (311)
T cd05213         240 DVVISATGA  248 (311)
T ss_pred             CEEEECCCC
Confidence            999999874

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=96.95  E-value=0.0075  Score=53.19  Aligned_cols=39  Identities=28%  Similarity=0.452  Sum_probs=33.7

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCc
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQD   49 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~   49 (272)
                      ...+++++|+|.|+ ||+|..+++.|++.|. ++.+++++.
T Consensus        19 Q~~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~   58 (338)
T PRK12475         19 QRKIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDY   58 (338)
T ss_pred             HHhhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence            45678899999996 7899999999999997 788888763

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=96.92  E-value=0.0039  Score=53.10  Aligned_cols=105  Identities=16%  Similarity=0.224  Sum_probs=70.3

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHh-CCccE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKF-GKLDI   92 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~id~   92 (272)
                      .|.+++|++|+|..|.-+.+--.-+|++|+.+.-.+++..-+.++++-..   ..|-.+. +.   .+.+++.. ..+|+
T Consensus       150 ~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD~---~idyk~~-d~---~~~L~~a~P~GIDv  222 (340)
T COG2130         150 AGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFDA---GIDYKAE-DF---AQALKEACPKGIDV  222 (340)
T ss_pred             CCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCCce---eeecCcc-cH---HHHHHHHCCCCeEE
Confidence            58999999999999987665555579999999988888776666665321   1233222 33   33344433 36999


Q ss_pred             EEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccc
Q 024145           93 MYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEI  155 (272)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~  155 (272)
                      .|-|.|..             -+               .+++++|  +..+||+.+..++.+.
T Consensus       223 yfeNVGg~-------------v~---------------DAv~~~l--n~~aRi~~CG~IS~YN  255 (340)
T COG2130         223 YFENVGGE-------------VL---------------DAVLPLL--NLFARIPVCGAISQYN  255 (340)
T ss_pred             EEEcCCch-------------HH---------------HHHHHhh--ccccceeeeeehhhcC
Confidence            99999842             11               2244445  3568899988777654

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=96.90  E-value=0.0096  Score=53.47  Aligned_cols=77  Identities=22%  Similarity=0.409  Sum_probs=59.4

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGK   89 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (272)
                      .++++|++||.|+ |-+|.-++++|+++|. +|+++.|+.++.+++.++++.       +....+++...++       .
T Consensus       174 ~~L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~-------~~~~l~el~~~l~-------~  238 (414)
T COG0373         174 GSLKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGA-------EAVALEELLEALA-------E  238 (414)
T ss_pred             cccccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCC-------eeecHHHHHHhhh-------h
Confidence            4489999999995 5789999999999995 688999999999999998872       3334444444333       6


Q ss_pred             ccEEEeCCCCCCC
Q 024145           90 LDIMYNNAGILDR  102 (272)
Q Consensus        90 id~lv~~ag~~~~  102 (272)
                      .|++|.+.|...+
T Consensus       239 ~DvVissTsa~~~  251 (414)
T COG0373         239 ADVVISSTSAPHP  251 (414)
T ss_pred             CCEEEEecCCCcc
Confidence            7999998885443

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=96.90  E-value=0.0015  Score=43.69  Aligned_cols=36  Identities=22%  Similarity=0.487  Sum_probs=23.5

Q ss_pred             CCC-cEEEEeCCCChHHHH--HHHHHHHcCCeEEEeecCc
Q 024145           13 LEG-KVAIITGGASGIGAM--AVELFHENGAKVVIADVQD   49 (272)
Q Consensus        13 l~~-k~vlItGas~giG~a--ia~~la~~G~~V~~~~r~~   49 (272)
                      ++| |+|||+|+|+|.|++  |+.+| ..|++.+.++...
T Consensus        36 ~~GpK~VLViGaStGyGLAsRIa~aF-g~gA~TiGV~fEk   74 (78)
T PF12242_consen   36 INGPKKVLVIGASTGYGLASRIAAAF-GAGADTIGVSFEK   74 (78)
T ss_dssp             -TS-SEEEEES-SSHHHHHHHHHHHH-CC--EEEEEE---
T ss_pred             CCCCceEEEEecCCcccHHHHHHHHh-cCCCCEEEEeecc
Confidence            355 899999999999999  55555 6688888877543

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.88  E-value=0.0078  Score=53.25  Aligned_cols=80  Identities=26%  Similarity=0.402  Sum_probs=54.6

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHH-hCCcc
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSK-FGKLD   91 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g~id   91 (272)
                      -+|+.+||.||+||+|.+.++-....|+..+++.++++.. ++.++++..   ...|-.+++-+    +++++. .+++|
T Consensus       156 ~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~-~l~k~lGAd---~vvdy~~~~~~----e~~kk~~~~~~D  227 (347)
T KOG1198|consen  156 SKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKL-ELVKKLGAD---EVVDYKDENVV----ELIKKYTGKGVD  227 (347)
T ss_pred             CCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchH-HHHHHcCCc---EeecCCCHHHH----HHHHhhcCCCcc
Confidence            3678999999999999998887777895555555555543 466677643   33455564333    333332 45799


Q ss_pred             EEEeCCCCC
Q 024145           92 IMYNNAGIL  100 (272)
Q Consensus        92 ~lv~~ag~~  100 (272)
                      +++.+.|..
T Consensus       228 vVlD~vg~~  236 (347)
T KOG1198|consen  228 VVLDCVGGS  236 (347)
T ss_pred             EEEECCCCC
Confidence            999999863

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=96.87  E-value=0.0061  Score=53.13  Aligned_cols=78  Identities=21%  Similarity=0.335  Sum_probs=52.4

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      .|.++||+||+|++|.++++.....|++|+.+.+++++.+.+ ++++... +  .|-.+.+..+. +.+...  +++|++
T Consensus       143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l-~~~Ga~~-v--i~~~~~~~~~~-v~~~~~--~gvd~v  215 (329)
T cd08294         143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWL-KELGFDA-V--FNYKTVSLEEA-LKEAAP--DGIDCY  215 (329)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCCE-E--EeCCCccHHHH-HHHHCC--CCcEEE
Confidence            578999999999999998888888899999988877765544 4465432 2  23333222222 222211  369999


Q ss_pred             EeCCC
Q 024145           94 YNNAG   98 (272)
Q Consensus        94 v~~ag   98 (272)
                      +.+.|
T Consensus       216 ld~~g  220 (329)
T cd08294         216 FDNVG  220 (329)
T ss_pred             EECCC
Confidence            98876

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PLN00203 glutamyl-tRNA reductase

Probab=96.86  E-value=0.0058  Score=56.88  Aligned_cols=76  Identities=16%  Similarity=0.302  Sum_probs=55.8

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   91 (272)
                      +.+++++|.|+ |.+|+.+++.|...|+ +|+++.|+.+..+.+.+..++ .....   ...++....+.       ..|
T Consensus       264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g-~~i~~---~~~~dl~~al~-------~aD  331 (519)
T PLN00203        264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPD-VEIIY---KPLDEMLACAA-------EAD  331 (519)
T ss_pred             CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCC-CceEe---ecHhhHHHHHh-------cCC
Confidence            78999999998 9999999999999997 699999999888888776642 11111   12223322222       679


Q ss_pred             EEEeCCCCC
Q 024145           92 IMYNNAGIL  100 (272)
Q Consensus        92 ~lv~~ag~~  100 (272)
                      +||.+.+..
T Consensus       332 VVIsAT~s~  340 (519)
T PLN00203        332 VVFTSTSSE  340 (519)
T ss_pred             EEEEccCCC
Confidence            999988644

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=96.86  E-value=0.0064  Score=52.47  Aligned_cols=79  Identities=30%  Similarity=0.439  Sum_probs=53.6

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      .|++++|+|+++++|.++++.+...|++|+++.++++..+.+ .+.+..   ...+....+..+.+.... . ..++|++
T Consensus       139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~---~~~~~~~~~~~~~~~~~~-~-~~~~d~~  212 (325)
T TIGR02824       139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAAC-EALGAD---IAINYREEDFVEVVKAET-G-GKGVDVI  212 (325)
T ss_pred             CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCc---EEEecCchhHHHHHHHHc-C-CCCeEEE
Confidence            578999999999999999999999999999998887766543 444432   112333333333322221 1 1259999


Q ss_pred             EeCCC
Q 024145           94 YNNAG   98 (272)
Q Consensus        94 v~~ag   98 (272)
                      ++++|
T Consensus       213 i~~~~  217 (325)
T TIGR02824       213 LDIVG  217 (325)
T ss_pred             EECCc
Confidence            99886

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.86  E-value=0.0075  Score=48.16  Aligned_cols=75  Identities=25%  Similarity=0.290  Sum_probs=49.8

Q ss_pred             ccCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145            8 APFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus         8 ~~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      ....++.||++.|.| .|.||+++++.|..-|++|+..+|........ ...+  +   ..+     ++++++.      
T Consensus        29 ~~~~~l~g~tvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~-~~~~--~---~~~-----~l~ell~------   90 (178)
T PF02826_consen   29 FPGRELRGKTVGIIG-YGRIGRAVARRLKAFGMRVIGYDRSPKPEEGA-DEFG--V---EYV-----SLDELLA------   90 (178)
T ss_dssp             TTBS-STTSEEEEES-TSHHHHHHHHHHHHTT-EEEEEESSCHHHHHH-HHTT--E---EES-----SHHHHHH------
T ss_pred             CCccccCCCEEEEEE-EcCCcCeEeeeeecCCceeEEecccCChhhhc-cccc--c---eee-----ehhhhcc------
Confidence            345678999999998 59999999999999999999999987754411 1111  1   111     2333344      


Q ss_pred             CCccEEEeCCCCCC
Q 024145           88 GKLDIMYNNAGILD  101 (272)
Q Consensus        88 g~id~lv~~ag~~~  101 (272)
                       ..|+|+++.....
T Consensus        91 -~aDiv~~~~plt~  103 (178)
T PF02826_consen   91 -QADIVSLHLPLTP  103 (178)
T ss_dssp             -H-SEEEE-SSSST
T ss_pred             -hhhhhhhhhcccc
Confidence             4699998887543

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.76  E-value=0.0058  Score=52.46  Aligned_cols=38  Identities=24%  Similarity=0.363  Sum_probs=34.2

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecC
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQ   48 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~   48 (272)
                      .+++||.++|.|+++-.|+.++..|+++|++|.++.|+
T Consensus       155 i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~  192 (283)
T PRK14192        155 IELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSR  192 (283)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCC
Confidence            46899999999999889999999999999998887763

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=96.74  E-value=0.051  Score=50.42  Aligned_cols=83  Identities=18%  Similarity=0.276  Sum_probs=58.5

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCC-------------HHHHHHH
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISN-------------EDEVINL   79 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-------------~~~~~~~   79 (272)
                      ..+.+++|.|+ |.+|...+..+...|++|++++++....+.. +.++.  .++..|..+             .+..++.
T Consensus       162 vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a-~~lGa--~~v~v~~~e~g~~~~gYa~~~s~~~~~~~  237 (511)
T TIGR00561       162 VPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQV-QSMGA--EFLELDFKEEGGSGDGYAKVMSEEFIAAE  237 (511)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCC--eEEeccccccccccccceeecCHHHHHHH
Confidence            45679999995 9999999999999999999999988765543 44554  344555421             3334444


Q ss_pred             HHHHHHHhCCccEEEeCCCC
Q 024145           80 VDTAVSKFGKLDIMYNNAGI   99 (272)
Q Consensus        80 ~~~~~~~~g~id~lv~~ag~   99 (272)
                      ...+.++....|++|+++-+
T Consensus       238 ~~~~~e~~~~~DIVI~Tali  257 (511)
T TIGR00561       238 MELFAAQAKEVDIIITTALI  257 (511)
T ss_pred             HHHHHHHhCCCCEEEECccc
Confidence            44455556689999999944

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.73  E-value=0.0093  Score=50.06  Aligned_cols=78  Identities=27%  Similarity=0.413  Sum_probs=53.0

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDI   92 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   92 (272)
                      ..|++++|+|+++ +|.++++.+...|.+|++++++++..+.+ +..+...   ..|..+.+..+.+.   ....+.+|+
T Consensus       133 ~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~---~~~~~~~~~~~~~~---~~~~~~~d~  204 (271)
T cd05188         133 KPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELA-KELGADH---VIDYKEEDLEEELR---LTGGGGADV  204 (271)
T ss_pred             CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HHhCCce---eccCCcCCHHHHHH---HhcCCCCCE
Confidence            3678999999998 99999998888999999999887665544 4444221   12333333333322   222346999


Q ss_pred             EEeCCC
Q 024145           93 MYNNAG   98 (272)
Q Consensus        93 lv~~ag   98 (272)
                      ++++++
T Consensus       205 vi~~~~  210 (271)
T cd05188         205 VIDAVG  210 (271)
T ss_pred             EEECCC
Confidence            999887

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.72  E-value=0.0085  Score=51.76  Aligned_cols=79  Identities=23%  Similarity=0.378  Sum_probs=52.6

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      ++++++|+|+++++|.++++.+...|++|+.+.++.+..+.+ .+.+.. .++  |....+..+.+.... . ...+|++
T Consensus       144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~-~~~--~~~~~~~~~~~~~~~-~-~~~~d~v  217 (328)
T cd08268         144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDAL-LALGAA-HVI--VTDEEDLVAEVLRIT-G-GKGVDVV  217 (328)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHcCCC-EEE--ecCCccHHHHHHHHh-C-CCCceEE
Confidence            578999999999999999999999999999998887665544 444421 222  222222222222211 1 1259999


Q ss_pred             EeCCC
Q 024145           94 YNNAG   98 (272)
Q Consensus        94 v~~ag   98 (272)
                      +++.|
T Consensus       218 i~~~~  222 (328)
T cd08268         218 FDPVG  222 (328)
T ss_pred             EECCc
Confidence            99887

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PRK04148 hypothetical protein; Provisional

Probab=96.71  E-value=0.018  Score=43.52  Aligned_cols=55  Identities=18%  Similarity=0.159  Sum_probs=44.1

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCC
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISN   72 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~   72 (272)
                      .+++++++.|..  .|.+++..|++.|++|++++.++...+...+.   .+.++..|+.+
T Consensus        15 ~~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~---~~~~v~dDlf~   69 (134)
T PRK04148         15 GKNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKKL---GLNAFVDDLFN   69 (134)
T ss_pred             ccCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHh---CCeEEECcCCC
Confidence            356789999987  88889999999999999999998866555432   36778888876

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=96.70  E-value=0.0093  Score=49.53  Aligned_cols=74  Identities=23%  Similarity=0.306  Sum_probs=57.1

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEeC
Q 024145           17 VAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNN   96 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~   96 (272)
                      .++|.| .|-+|..+|+.|.++|++|++++++++..++..... ...+.+.+|-++++-++++=      ....|++|..
T Consensus         2 ~iiIiG-~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~-~~~~~v~gd~t~~~~L~~ag------i~~aD~vva~   73 (225)
T COG0569           2 KIIIIG-AGRVGRSVARELSEEGHNVVLIDRDEERVEEFLADE-LDTHVVIGDATDEDVLEEAG------IDDADAVVAA   73 (225)
T ss_pred             EEEEEC-CcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhh-cceEEEEecCCCHHHHHhcC------CCcCCEEEEe
Confidence            456666 578999999999999999999999998876644311 35788999999988776541      1268998887


Q ss_pred             CC
Q 024145           97 AG   98 (272)
Q Consensus        97 ag   98 (272)
                      .|
T Consensus        74 t~   75 (225)
T COG0569          74 TG   75 (225)
T ss_pred             eC
Confidence            76

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=96.69  E-value=0.018  Score=50.14  Aligned_cols=115  Identities=16%  Similarity=0.121  Sum_probs=66.9

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCC--eEEEeecCc--chHHHHHHHhCCceEE----EEecCC-CHHHHHHHHHHHHHH
Q 024145           16 KVAIITGGASGIGAMAVELFHENGA--KVVIADVQD--KLGEDLADKLGQDVCY----IHCDIS-NEDEVINLVDTAVSK   86 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~--~V~~~~r~~--~~~~~~~~~~~~~~~~----~~~D~~-~~~~~~~~~~~~~~~   86 (272)
                      +++.|+|++|.+|..++..|+..|.  +|++++|++  +.++.....+......    ..+..+ |.+           .
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~i~~~~d~~-----------~   69 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIKISSDLS-----------D   69 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCcEEEECCCHH-----------H
Confidence            3689999999999999999999986  499999854  3222111111100000    011111 211           1


Q ss_pred             hCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccc
Q 024145           87 FGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASAC  152 (272)
Q Consensus        87 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~  152 (272)
                      ....|++|..+|....     .+.+.   .+.++.|+.-.....+.+.++.   ..+.+|.+++..
T Consensus        70 l~~aDiViitag~p~~-----~~~~r---~dl~~~n~~i~~~~~~~i~~~~---~~~~viv~~npv  124 (309)
T cd05294          70 VAGSDIVIITAGVPRK-----EGMSR---LDLAKKNAKIVKKYAKQIAEFA---PDTKILVVTNPV  124 (309)
T ss_pred             hCCCCEEEEecCCCCC-----CCCCH---HHHHHHHHHHHHHHHHHHHHHC---CCeEEEEeCCch
Confidence            2378999999997432     12222   3445556665555555554432   467788888754

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=96.69  E-value=0.014  Score=50.64  Aligned_cols=71  Identities=18%  Similarity=0.313  Sum_probs=49.8

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      .++.+++++|.|. |++|+.++..|...|++|.+.+|+++..+. .+..+.  .++     ..+++.       +.....
T Consensus       148 ~~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~-~~~~G~--~~~-----~~~~l~-------~~l~~a  211 (296)
T PRK08306        148 ITIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLAR-ITEMGL--SPF-----HLSELA-------EEVGKI  211 (296)
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHcCC--eee-----cHHHHH-------HHhCCC
Confidence            3467999999997 789999999999999999999998765433 333442  222     112222       223478


Q ss_pred             cEEEeCC
Q 024145           91 DIMYNNA   97 (272)
Q Consensus        91 d~lv~~a   97 (272)
                      |++|+..
T Consensus       212 DiVI~t~  218 (296)
T PRK08306        212 DIIFNTI  218 (296)
T ss_pred             CEEEECC
Confidence            9999975

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.67  E-value=0.023  Score=48.98  Aligned_cols=64  Identities=28%  Similarity=0.392  Sum_probs=50.0

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCC-CHHHHHHHHH
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDIS-NEDEVINLVD   81 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~   81 (272)
                      .||++.|+|+.| +|.--++.--..|++|+.+++...+.++..+.+++....   |.+ |++.++++.+
T Consensus       181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~fv---~~~~d~d~~~~~~~  245 (360)
T KOG0023|consen  181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADVFV---DSTEDPDIMKAIMK  245 (360)
T ss_pred             CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcceeE---EecCCHHHHHHHHH
Confidence            689999999988 997655555556999999999998889999999876433   455 6777666555

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=96.65  E-value=0.011  Score=51.51  Aligned_cols=79  Identities=23%  Similarity=0.364  Sum_probs=53.6

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      .+.+++|.|+++++|.++++.+.+.|++|+.+.++....+.+.+.++.. .+  .|..+.+..+.+.+ ...  +++|++
T Consensus       145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~~-~~--~~~~~~~~~~~v~~-~~~--~~~d~v  218 (329)
T cd05288         145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGFD-AA--INYKTPDLAEALKE-AAP--DGIDVY  218 (329)
T ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCCc-eE--EecCChhHHHHHHH-hcc--CCceEE
Confidence            5789999999999999999999999999999988777665554435431 12  22233333222222 211  469999


Q ss_pred             EeCCC
Q 024145           94 YNNAG   98 (272)
Q Consensus        94 v~~ag   98 (272)
                      +.+.|
T Consensus       219 i~~~g  223 (329)
T cd05288         219 FDNVG  223 (329)
T ss_pred             EEcch
Confidence            98876

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=96.61  E-value=0.019  Score=50.71  Aligned_cols=39  Identities=28%  Similarity=0.467  Sum_probs=34.1

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCc
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQD   49 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~   49 (272)
                      ...+++++|+|.|+ ||+|..+++.|++.|. ++.+++.+.
T Consensus        19 Q~~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~   58 (339)
T PRK07688         19 QQKLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDY   58 (339)
T ss_pred             HHHhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCc
Confidence            34678899999997 8999999999999998 799998763

>PRK05442 malate dehydrogenase; Provisional

Probab=96.59  E-value=0.021  Score=50.12  Aligned_cols=113  Identities=12%  Similarity=0.093  Sum_probs=63.9

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCC-------eEEEeecCcch--HHHHHHHhCCceEEEEecCCCHHHHH----HHHHH
Q 024145           16 KVAIITGGASGIGAMAVELFHENGA-------KVVIADVQDKL--GEDLADKLGQDVCYIHCDISNEDEVI----NLVDT   82 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~-------~V~~~~r~~~~--~~~~~~~~~~~~~~~~~D~~~~~~~~----~~~~~   82 (272)
                      +++.|+|++|.+|..++..|+..|.       ++++.+.++..  ++.           ..+|+.+.....    .+...
T Consensus         5 ~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g-----------~a~Dl~~~~~~~~~~~~i~~~   73 (326)
T PRK05442          5 VRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEG-----------VVMELDDCAFPLLAGVVITDD   73 (326)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccce-----------eehhhhhhhhhhcCCcEEecC
Confidence            4889999999999999999998763       68999875431  211           112222111000    00011


Q ss_pred             HHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcC-C-CCceEEEEecc
Q 024145           83 AVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVP-Q-QKGCILFTASA  151 (272)
Q Consensus        83 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~-~~g~iv~iss~  151 (272)
                      ..+.+.+.|++|..||....   +  ..+   -.+.++.|+.-.    +.+.+.+.+ . ..+.++.+|-.
T Consensus        74 ~y~~~~daDiVVitaG~~~k---~--g~t---R~dll~~Na~i~----~~i~~~i~~~~~~~~iiivvsNP  132 (326)
T PRK05442         74 PNVAFKDADVALLVGARPRG---P--GME---RKDLLEANGAIF----TAQGKALNEVAARDVKVLVVGNP  132 (326)
T ss_pred             hHHHhCCCCEEEEeCCCCCC---C--CCc---HHHHHHHHHHHH----HHHHHHHHHhCCCCeEEEEeCCc
Confidence            12334478999999996432   1  122   334455565544    444444444 3 46777777643

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.56  E-value=0.011  Score=54.16  Aligned_cols=59  Identities=22%  Similarity=0.260  Sum_probs=46.3

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHH
Q 024145           17 VAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVIN   78 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   78 (272)
                      +++|.|+ |.+|+++++.|.+.|+.|++++++++..+.+.+.  ..+.++..|.++.+.+++
T Consensus         2 ~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~--~~~~~~~gd~~~~~~l~~   60 (453)
T PRK09496          2 KIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDR--LDVRTVVGNGSSPDVLRE   60 (453)
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhh--cCEEEEEeCCCCHHHHHH
Confidence            5888887 9999999999999999999999988876665442  246677778777665544

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=96.54  E-value=0.013  Score=58.64  Aligned_cols=77  Identities=14%  Similarity=0.261  Sum_probs=61.9

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcC-Ce-------------EEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHH
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENG-AK-------------VVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINL   79 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G-~~-------------V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   79 (272)
                      +.|.++|.|+ |.+|+..++.|++.. ++             |.+.+++.+..+++.+... ++.++++|++|.+++.++
T Consensus       568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~-~~~~v~lDv~D~e~L~~~  645 (1042)
T PLN02819        568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIE-NAEAVQLDVSDSESLLKY  645 (1042)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcC-CCceEEeecCCHHHHHHh
Confidence            4678999996 999999999999863 33             7778888887777776652 567899999999887766


Q ss_pred             HHHHHHHhCCccEEEeCCCC
Q 024145           80 VDTAVSKFGKLDIMYNNAGI   99 (272)
Q Consensus        80 ~~~~~~~~g~id~lv~~ag~   99 (272)
                      +.       .+|+||++...
T Consensus       646 v~-------~~DaVIsalP~  658 (1042)
T PLN02819        646 VS-------QVDVVISLLPA  658 (1042)
T ss_pred             hc-------CCCEEEECCCc
Confidence            55       58999998864

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=96.50  E-value=0.015  Score=42.64  Aligned_cols=71  Identities=24%  Similarity=0.240  Sum_probs=53.6

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCC
Q 024145           18 AIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNA   97 (272)
Q Consensus        18 vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~a   97 (272)
                      ++|.|. +.+|+.+++.|.+.+.+|++++++++..+.+.+.   .+.++..|.++++.++++--      .+.+.+|...
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~---~~~~i~gd~~~~~~l~~a~i------~~a~~vv~~~   70 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELREE---GVEVIYGDATDPEVLERAGI------EKADAVVILT   70 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHT---TSEEEES-TTSHHHHHHTTG------GCESEEEEES
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhc---ccccccccchhhhHHhhcCc------cccCEEEEcc
Confidence            567776 5899999999999887999999998876665543   37899999999998765311      2678777766


Q ss_pred             C
Q 024145           98 G   98 (272)
Q Consensus        98 g   98 (272)
                      .
T Consensus        71 ~   71 (116)
T PF02254_consen   71 D   71 (116)
T ss_dssp             S
T ss_pred             C
Confidence            4

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=96.48  E-value=0.018  Score=50.77  Aligned_cols=76  Identities=29%  Similarity=0.457  Sum_probs=51.9

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   91 (272)
                      ..|++++|+|+ |++|...++.+...|+ +|+++++++++.+ +.++++....   .|..+ +++.+    +.+..+.+|
T Consensus       168 ~~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~-~a~~lGa~~v---i~~~~-~~~~~----~~~~~g~~D  237 (343)
T PRK09880        168 LQGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLS-LAREMGADKL---VNPQN-DDLDH----YKAEKGYFD  237 (343)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHH-HHHHcCCcEE---ecCCc-ccHHH----HhccCCCCC
Confidence            36889999986 9999999888878898 5888888877665 4455765322   23333 22222    222235699


Q ss_pred             EEEeCCC
Q 024145           92 IMYNNAG   98 (272)
Q Consensus        92 ~lv~~ag   98 (272)
                      ++|.+.|
T Consensus       238 ~vid~~G  244 (343)
T PRK09880        238 VSFEVSG  244 (343)
T ss_pred             EEEECCC
Confidence            9999987

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=96.47  E-value=0.022  Score=49.89  Aligned_cols=73  Identities=30%  Similarity=0.434  Sum_probs=52.7

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      .|++++|+|+. |+|...++.....|++|++++|++++.+ +.++++....+.   -++.+..+++-.       .+|++
T Consensus       166 pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e-~a~~lGAd~~i~---~~~~~~~~~~~~-------~~d~i  233 (339)
T COG1064         166 PGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLE-LAKKLGADHVIN---SSDSDALEAVKE-------IADAI  233 (339)
T ss_pred             CCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHH-HHHHhCCcEEEE---cCCchhhHHhHh-------hCcEE
Confidence            47999999999 9999977777779999999999988765 445666543332   224444333222       28999


Q ss_pred             EeCCC
Q 024145           94 YNNAG   98 (272)
Q Consensus        94 v~~ag   98 (272)
                      +..++
T Consensus       234 i~tv~  238 (339)
T COG1064         234 IDTVG  238 (339)
T ss_pred             EECCC
Confidence            99987

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=96.47  E-value=0.05  Score=45.34  Aligned_cols=39  Identities=23%  Similarity=0.486  Sum_probs=32.6

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCc
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQD   49 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~   49 (272)
                      +..+++++++|.| .||+|..+++.|++.|. ++++++.+.
T Consensus         6 ~~~L~~~~VlVvG-~GGvGs~va~~Lar~GVg~i~LvD~D~   45 (231)
T cd00755           6 LEKLRNAHVAVVG-LGGVGSWAAEALARSGVGKLTLIDFDV   45 (231)
T ss_pred             HHHHhCCCEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCE
Confidence            3457888999998 57999999999999997 688887653

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=96.43  E-value=0.027  Score=45.92  Aligned_cols=38  Identities=32%  Similarity=0.471  Sum_probs=33.6

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecC
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQ   48 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~   48 (272)
                      +..+++++++|.| .||+|..+++.|+..|. ++.+++.+
T Consensus        16 q~kl~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d   54 (202)
T TIGR02356        16 QQRLLNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDD   54 (202)
T ss_pred             HHHhcCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCC
Confidence            4568889999999 77999999999999997 78998876

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.43  E-value=0.06  Score=49.41  Aligned_cols=76  Identities=21%  Similarity=0.333  Sum_probs=49.8

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchH-HHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLG-EDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   91 (272)
                      +.+|+++|+|.+ ++|.++++.|+++|++|.+.+...... ....++....+.+..... +..    ..       ...|
T Consensus         3 ~~~~~~~v~G~g-~~G~~~a~~l~~~g~~v~~~d~~~~~~~~~~l~~~~~gi~~~~g~~-~~~----~~-------~~~d   69 (445)
T PRK04308          3 FQNKKILVAGLG-GTGISMIAYLRKNGAEVAAYDAELKPERVAQIGKMFDGLVFYTGRL-KDA----LD-------NGFD   69 (445)
T ss_pred             CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCchhHHHHhhccCCcEEEeCCC-CHH----HH-------hCCC
Confidence            578999999975 999999999999999999988755431 111121112333333221 111    11       2689


Q ss_pred             EEEeCCCCCC
Q 024145           92 IMYNNAGILD  101 (272)
Q Consensus        92 ~lv~~ag~~~  101 (272)
                      .||...|+..
T Consensus        70 ~vv~spgi~~   79 (445)
T PRK04308         70 ILALSPGISE   79 (445)
T ss_pred             EEEECCCCCC
Confidence            9999999854

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=96.41  E-value=0.017  Score=50.17  Aligned_cols=79  Identities=27%  Similarity=0.362  Sum_probs=53.7

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      .+.+++|+|+++++|.++++.+...|++|+.+.++.+..+.+ ++++...   ..|..+.+..+.+....  ...++|++
T Consensus       142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~-~~~g~~~---~~~~~~~~~~~~~~~~~--~~~~~d~v  215 (324)
T cd08244         142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALV-RALGADV---AVDYTRPDWPDQVREAL--GGGGVTVV  215 (324)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCCCE---EEecCCccHHHHHHHHc--CCCCceEE
Confidence            467999999999999999999999999999998887766554 5555321   22333333333322211  11259999


Q ss_pred             EeCCC
Q 024145           94 YNNAG   98 (272)
Q Consensus        94 v~~ag   98 (272)
                      +++.|
T Consensus       216 l~~~g  220 (324)
T cd08244         216 LDGVG  220 (324)
T ss_pred             EECCC
Confidence            99876

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=96.34  E-value=0.011  Score=44.29  Aligned_cols=83  Identities=17%  Similarity=0.249  Sum_probs=50.3

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCeEEEe-ecCcchHHHHHHHhCC-----------ceEEEEecCCCHHHHHHHHHHHH
Q 024145           17 VAIITGGASGIGAMAVELFHENGAKVVIA-DVQDKLGEDLADKLGQ-----------DVCYIHCDISNEDEVINLVDTAV   84 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~~V~~~-~r~~~~~~~~~~~~~~-----------~~~~~~~D~~~~~~~~~~~~~~~   84 (272)
                      ++-|.|+ |.+|.++++.|.+.|++|..+ +|+.+..+++.+.++.           ....+-+-+.| +.+..+++++.
T Consensus        12 ~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~iavpD-daI~~va~~La   89 (127)
T PF10727_consen   12 KIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIAVPD-DAIAEVAEQLA   89 (127)
T ss_dssp             EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE-S-C-CHHHHHHHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccccccccCCEEEEEech-HHHHHHHHHHH
Confidence            6888887 899999999999999998776 4665555555544321           22333333333 36677777776


Q ss_pred             HH--hCCccEEEeCCCCCC
Q 024145           85 SK--FGKLDIMYNNAGILD  101 (272)
Q Consensus        85 ~~--~g~id~lv~~ag~~~  101 (272)
                      ..  ..+=.+++|+.|-..
T Consensus        90 ~~~~~~~g~iVvHtSGa~~  108 (127)
T PF10727_consen   90 QYGAWRPGQIVVHTSGALG  108 (127)
T ss_dssp             CC--S-TT-EEEES-SS--
T ss_pred             HhccCCCCcEEEECCCCCh
Confidence            54  223369999999643

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=96.33  E-value=0.0072  Score=51.38  Aligned_cols=38  Identities=18%  Similarity=0.435  Sum_probs=32.0

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecC
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQ   48 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~   48 (272)
                      +..|++++|+|.| .||+|..+++.|++.|. ++.+++.+
T Consensus        25 ~~kL~~s~VlVvG-~GGVGs~vae~Lar~GVg~itLiD~D   63 (268)
T PRK15116         25 LQLFADAHICVVG-IGGVGSWAAEALARTGIGAITLIDMD   63 (268)
T ss_pred             HHHhcCCCEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            4567888999998 56999999999999994 68888765

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=96.28  E-value=0.052  Score=47.60  Aligned_cols=116  Identities=14%  Similarity=0.069  Sum_probs=65.4

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCC-------eEEEeecCcc--hHHHHHHHhCCce-EEEEecCCCHHHHHHHHHHHHHH
Q 024145           17 VAIITGGASGIGAMAVELFHENGA-------KVVIADVQDK--LGEDLADKLGQDV-CYIHCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~-------~V~~~~r~~~--~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~   86 (272)
                      ++.|+|++|++|.+++..|+..|.       ++++.+.++.  .++....++.... -... +..    +.   ....+.
T Consensus         5 KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~-~~~----i~---~~~~~~   76 (323)
T TIGR01759         5 RVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLA-GVV----AT---TDPEEA   76 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccC-CcE----Ee---cChHHH
Confidence            789999999999999999998873       7999998542  2332222221100 0000 110    00   011222


Q ss_pred             hCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEec
Q 024145           87 FGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTAS  150 (272)
Q Consensus        87 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss  150 (272)
                      ....|++|..||....   +  ..+   -.+.++.|+.-.-.+.+.+.++-.  +.+.++.+|-
T Consensus        77 ~~daDvVVitAG~~~k---~--g~t---R~dll~~Na~i~~~i~~~i~~~~~--~~~iiivvsN  130 (323)
T TIGR01759        77 FKDVDAALLVGAFPRK---P--GME---RADLLSKNGKIFKEQGKALNKVAK--KDVKVLVVGN  130 (323)
T ss_pred             hCCCCEEEEeCCCCCC---C--CCc---HHHHHHHHHHHHHHHHHHHHhhCC--CCeEEEEeCC
Confidence            3378999999997532   1  122   344566666655555554444321  2677777764

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=96.28  E-value=0.052  Score=40.56  Aligned_cols=76  Identities=21%  Similarity=0.293  Sum_probs=54.3

Q ss_pred             EEEEeCCCChHHHHHHHHHHH-cCCeEEE-eecCc----------------------chHHHHHHHhCCceEEEEecCCC
Q 024145           17 VAIITGGASGIGAMAVELFHE-NGAKVVI-ADVQD----------------------KLGEDLADKLGQDVCYIHCDISN   72 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~-~G~~V~~-~~r~~----------------------~~~~~~~~~~~~~~~~~~~D~~~   72 (272)
                      ++.|.|++|-+|+.+++.+.+ .+.+++. ++|++                      ...+++.+.     .-+-.|.+.
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~-----~DVvIDfT~   76 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEE-----ADVVIDFTN   76 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH------SEEEEES-
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhccc-----CCEEEEcCC
Confidence            589999999999999999999 5778654 55655                      223333333     226679999


Q ss_pred             HHHHHHHHHHHHHHhCCccEEEeCCCC
Q 024145           73 EDEVINLVDTAVSKFGKLDIMYNNAGI   99 (272)
Q Consensus        73 ~~~~~~~~~~~~~~~g~id~lv~~ag~   99 (272)
                      ++.+...+....+.  ++-+++-..|.
T Consensus        77 p~~~~~~~~~~~~~--g~~~ViGTTG~  101 (124)
T PF01113_consen   77 PDAVYDNLEYALKH--GVPLVIGTTGF  101 (124)
T ss_dssp             HHHHHHHHHHHHHH--T-EEEEE-SSS
T ss_pred             hHHhHHHHHHHHhC--CCCEEEECCCC
Confidence            99999988888777  68888877775

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=96.26  E-value=0.024  Score=49.31  Aligned_cols=77  Identities=19%  Similarity=0.255  Sum_probs=51.7

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      .+++++|.|+++++|.++++.....|++|+.+.+++++.+.+ ++++...   ..|..+. ..+ .+....  .+.+|++
T Consensus       146 ~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~---v~~~~~~-~~~-~~~~~~--~~~~d~v  217 (326)
T cd08289         146 EQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYL-KKLGAKE---VIPREEL-QEE-SIKPLE--KQRWAGA  217 (326)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHH-HHcCCCE---EEcchhH-HHH-HHHhhc--cCCcCEE
Confidence            367999999999999999988888999999998887766555 4555321   1222222 111 122221  2358999


Q ss_pred             EeCCC
Q 024145           94 YNNAG   98 (272)
Q Consensus        94 v~~ag   98 (272)
                      +.+.|
T Consensus       218 ld~~g  222 (326)
T cd08289         218 VDPVG  222 (326)
T ss_pred             EECCc
Confidence            88876

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>PRK14968 putative methyltransferase; Provisional

Probab=96.23  E-value=0.077  Score=42.22  Aligned_cols=75  Identities=25%  Similarity=0.241  Sum_probs=50.6

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CC-c--eEEEEecCCCHHHHHHHHHHHHHH
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQ-D--VCYIHCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~-~--~~~~~~D~~~~~~~~~~~~~~~~~   86 (272)
                      .+++++|-.|+..|.   ++..+++.+.+|+.+++++...+...+.+   +. .  +.++.+|+.+..         .+ 
T Consensus        22 ~~~~~vLd~G~G~G~---~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~---------~~-   88 (188)
T PRK14968         22 KKGDRVLEVGTGSGI---VAIVAAKNGKKVVGVDINPYAVECAKCNAKLNNIRNNGVEVIRSDLFEPF---------RG-   88 (188)
T ss_pred             cCCCEEEEEccccCH---HHHHHHhhcceEEEEECCHHHHHHHHHHHHHcCCCCcceEEEeccccccc---------cc-
Confidence            367788888877665   45555666899999999887665554433   21 1  788888875421         11 


Q ss_pred             hCCccEEEeCCCCCC
Q 024145           87 FGKLDIMYNNAGILD  101 (272)
Q Consensus        87 ~g~id~lv~~ag~~~  101 (272)
                       ..+|.++.|..+..
T Consensus        89 -~~~d~vi~n~p~~~  102 (188)
T PRK14968         89 -DKFDVILFNPPYLP  102 (188)
T ss_pred             -cCceEEEECCCcCC
Confidence             16899999887643

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=96.23  E-value=0.026  Score=47.95  Aligned_cols=77  Identities=17%  Similarity=0.256  Sum_probs=49.4

Q ss_pred             EEEeCCCChHHHHHHHHHHHcC----CeEEEeecCcchHHHHHHHhCCceEEE-EecCCCHHHHHHHHHHHHHHhCCccE
Q 024145           18 AIITGGASGIGAMAVELFHENG----AKVVIADVQDKLGEDLADKLGQDVCYI-HCDISNEDEVINLVDTAVSKFGKLDI   92 (272)
Q Consensus        18 vlItGas~giG~aia~~la~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~D~~~~~~~~~~~~~~~~~~g~id~   92 (272)
                      +.|.||+|.+|..++..|+..|    .+|++.+++++.++....++..-.... ...+.-.++.+       +.+.+.|+
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~~~d~~-------~~~~~aDi   73 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSITDDPY-------EAFKDADV   73 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEECCchH-------HHhCCCCE
Confidence            4689998899999999999999    689999998876665554442111110 11111111111       12237899


Q ss_pred             EEeCCCCCC
Q 024145           93 MYNNAGILD  101 (272)
Q Consensus        93 lv~~ag~~~  101 (272)
                      +|..+|...
T Consensus        74 Vv~t~~~~~   82 (263)
T cd00650          74 VIITAGVGR   82 (263)
T ss_pred             EEECCCCCC
Confidence            999998654

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=96.23  E-value=0.025  Score=49.67  Aligned_cols=78  Identities=23%  Similarity=0.257  Sum_probs=52.0

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCe-EEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAK-VVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDI   92 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   92 (272)
                      .|++++|+|+ |++|..+++.+...|++ |+++++++++.+. .++++...   ..|..+.+ .+++.+ ... ..++|+
T Consensus       163 ~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~-~~~~ga~~---~i~~~~~~-~~~~~~-~~~-~~~~d~  234 (339)
T cd08239         163 GRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLEL-AKALGADF---VINSGQDD-VQEIRE-LTS-GAGADV  234 (339)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH-HHHhCCCE---EEcCCcch-HHHHHH-HhC-CCCCCE
Confidence            5889999986 89999999988888998 9988888776554 35666422   23333333 332222 111 126999


Q ss_pred             EEeCCCC
Q 024145           93 MYNNAGI   99 (272)
Q Consensus        93 lv~~ag~   99 (272)
                      +|.+.|.
T Consensus       235 vid~~g~  241 (339)
T cd08239         235 AIECSGN  241 (339)
T ss_pred             EEECCCC
Confidence            9998873

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=96.21  E-value=0.037  Score=47.75  Aligned_cols=76  Identities=26%  Similarity=0.399  Sum_probs=51.4

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      .|.+++|.|+++++|.++++.....|++|+.+.++++..+.+ .+.+.... +. +  +. +....+.+.   ..++|.+
T Consensus       142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~-~~-~--~~-~~~~~i~~~---~~~~d~v  212 (320)
T cd08243         142 PGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALL-KELGADEV-VI-D--DG-AIAEQLRAA---PGGFDKV  212 (320)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HhcCCcEE-Ee-c--Cc-cHHHHHHHh---CCCceEE
Confidence            578999999999999999999889999999888887665444 55553221 11 1  21 211112222   2369999


Q ss_pred             EeCCC
Q 024145           94 YNNAG   98 (272)
Q Consensus        94 v~~ag   98 (272)
                      +.+.|
T Consensus       213 l~~~~  217 (320)
T cd08243         213 LELVG  217 (320)
T ss_pred             EECCC
Confidence            98876

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=96.21  E-value=0.04  Score=47.95  Aligned_cols=115  Identities=19%  Similarity=0.134  Sum_probs=67.3

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcC--CeEEEeecCcchHHHHHHHhCC--ceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Q 024145           17 VAIITGGASGIGAMAVELFHENG--AKVVIADVQDKLGEDLADKLGQ--DVCYIHCDISNEDEVINLVDTAVSKFGKLDI   92 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G--~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   92 (272)
                      ++.|+|++|.+|.+++..|+..|  .++++++.+ ....+..+....  ......+. .+ ++       +.+.+...|+
T Consensus         2 KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~-~a~g~alDL~~~~~~~~i~~~~-~~-~~-------~y~~~~daDi   71 (310)
T cd01337           2 KVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV-NTPGVAADLSHINTPAKVTGYL-GP-EE-------LKKALKGADV   71 (310)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC-ccceeehHhHhCCCcceEEEec-CC-Cc-------hHHhcCCCCE
Confidence            68899999999999999999888  479999886 211111111111  11111110 00 11       1223347899


Q ss_pred             EEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccc
Q 024145           93 MYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASAC  152 (272)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~  152 (272)
                      +|..||....+     ..+   =.+.++.|..-...+.+.+.++   ...+.++++|-..
T Consensus        72 vvitaG~~~k~-----g~t---R~dll~~N~~i~~~i~~~i~~~---~p~a~vivvtNPv  120 (310)
T cd01337          72 VVIPAGVPRKP-----GMT---RDDLFNINAGIVRDLATAVAKA---CPKALILIISNPV  120 (310)
T ss_pred             EEEeCCCCCCC-----CCC---HHHHHHHHHHHHHHHHHHHHHh---CCCeEEEEccCch
Confidence            99999975321     122   3445666766665555555543   3567788877665

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=96.21  E-value=0.061  Score=45.27  Aligned_cols=37  Identities=19%  Similarity=0.477  Sum_probs=32.2

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecC
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQ   48 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~   48 (272)
                      ..+++++|+|.|+ ||+|..+++.|+..|. ++.+++.+
T Consensus        28 ~~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D   65 (245)
T PRK05690         28 EKLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFD   65 (245)
T ss_pred             HHhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            4578899999998 9999999999999997 68887754

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=96.20  E-value=0.042  Score=49.02  Aligned_cols=79  Identities=19%  Similarity=0.288  Sum_probs=52.5

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHHHHHHHhCCceEEEEecCCC-HHHHHHHHHHHHHHhCCcc
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGEDLADKLGQDVCYIHCDISN-EDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~id   91 (272)
                      .|.++||+|+ |+||...+..+...|+ +|+.+++++++.+.+ ++++...   ..|..+ .+++.+.+.++..  +.+|
T Consensus       185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a-~~~Ga~~---~i~~~~~~~~~~~~v~~~~~--~g~d  257 (368)
T TIGR02818       185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELA-KKLGATD---CVNPNDYDKPIQEVIVEITD--GGVD  257 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHhCCCe---EEcccccchhHHHHHHHHhC--CCCC
Confidence            5789999985 9999998888878898 799998887766544 5566432   223332 2233332332222  3699


Q ss_pred             EEEeCCCC
Q 024145           92 IMYNNAGI   99 (272)
Q Consensus        92 ~lv~~ag~   99 (272)
                      ++|.+.|.
T Consensus       258 ~vid~~G~  265 (368)
T TIGR02818       258 YSFECIGN  265 (368)
T ss_pred             EEEECCCC
Confidence            99999873

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=96.19  E-value=0.037  Score=49.23  Aligned_cols=74  Identities=20%  Similarity=0.362  Sum_probs=50.9

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      .|++++|.|+ |++|..+++.+...|++|++++.+.++..++.++++....   .|..+.+.+++       ..+.+|++
T Consensus       183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~Ga~~v---i~~~~~~~~~~-------~~~~~D~v  251 (360)
T PLN02586        183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGADSF---LVSTDPEKMKA-------AIGTMDYI  251 (360)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhCCCcEE---EcCCCHHHHHh-------hcCCCCEE
Confidence            6789999775 9999999888888899998887776665556566664321   23333332222       22468999


Q ss_pred             EeCCC
Q 024145           94 YNNAG   98 (272)
Q Consensus        94 v~~ag   98 (272)
                      |.+.|
T Consensus       252 id~~g  256 (360)
T PLN02586        252 IDTVS  256 (360)
T ss_pred             EECCC
Confidence            99887

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=96.19  E-value=0.025  Score=51.30  Aligned_cols=41  Identities=22%  Similarity=0.414  Sum_probs=36.1

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHH
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGE   53 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~   53 (272)
                      .+.||+++|.|. |.||+.+++.+...|++|+++++++.+..
T Consensus       209 ~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~  249 (425)
T PRK05476        209 LIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICAL  249 (425)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhH
Confidence            368999999996 79999999999999999999998876543

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.18  E-value=0.042  Score=49.30  Aligned_cols=37  Identities=24%  Similarity=0.418  Sum_probs=32.0

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecC
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQ   48 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~   48 (272)
                      ..+++++|+|.|+ ||+|..+++.|+..|. ++.+++++
T Consensus       131 ~~l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d  168 (376)
T PRK08762        131 RRLLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHD  168 (376)
T ss_pred             HHHhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            4578889999965 8999999999999998 68888876

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=96.14  E-value=0.024  Score=49.14  Aligned_cols=79  Identities=16%  Similarity=0.204  Sum_probs=52.3

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      .|.+++|.|+++.+|.++++.....|++|+.+.++.+..+.+.+ .+.. .++  +-.+.+..+. +.+.... .++|++
T Consensus       139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~-~g~~-~~~--~~~~~~~~~~-i~~~~~~-~~~d~v  212 (324)
T cd08292         139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRA-LGIG-PVV--STEQPGWQDK-VREAAGG-APISVA  212 (324)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHh-cCCC-EEE--cCCCchHHHH-HHHHhCC-CCCcEE
Confidence            57899999999999999999888899999988887776655543 4432 122  2223222222 2222111 259999


Q ss_pred             EeCCC
Q 024145           94 YNNAG   98 (272)
Q Consensus        94 v~~ag   98 (272)
                      +.+.|
T Consensus       213 ~d~~g  217 (324)
T cd08292         213 LDSVG  217 (324)
T ss_pred             EECCC
Confidence            98887

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=96.13  E-value=0.033  Score=47.78  Aligned_cols=79  Identities=22%  Similarity=0.339  Sum_probs=52.1

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      +|++++|.|+++++|.++++.....|++|+.+.+++++.+.+ .+.+... ++  +..+....+.+.. ... ...+|.+
T Consensus       136 ~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~-~~--~~~~~~~~~~~~~-~~~-~~~~d~v  209 (320)
T cd05286         136 PGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELA-RAAGADH-VI--NYRDEDFVERVRE-ITG-GRGVDVV  209 (320)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHCCCCE-EE--eCCchhHHHHHHH-HcC-CCCeeEE
Confidence            678999999999999999998888999999988877665554 4455321 22  2222222222221 111 1259999


Q ss_pred             EeCCC
Q 024145           94 YNNAG   98 (272)
Q Consensus        94 v~~ag   98 (272)
                      +++.+
T Consensus       210 l~~~~  214 (320)
T cd05286         210 YDGVG  214 (320)
T ss_pred             EECCC
Confidence            98876

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=96.12  E-value=0.029  Score=48.89  Aligned_cols=78  Identities=27%  Similarity=0.425  Sum_probs=52.3

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      .|.+++|.|+++.+|.++++.....|++|+.+.++++..+.+ ++++.. .+  +|..+.+ ..+.+.....  ..+|.+
T Consensus       139 ~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~-~v--~~~~~~~-~~~~~~~~~~--~~vd~v  211 (329)
T cd08250         139 SGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFL-KSLGCD-RP--INYKTED-LGEVLKKEYP--KGVDVV  211 (329)
T ss_pred             CCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHH-HHcCCc-eE--EeCCCcc-HHHHHHHhcC--CCCeEE
Confidence            578999999999999999888888899999988877665544 445532 12  2322222 2222222222  368999


Q ss_pred             EeCCC
Q 024145           94 YNNAG   98 (272)
Q Consensus        94 v~~ag   98 (272)
                      +++.|
T Consensus       212 ~~~~g  216 (329)
T cd08250         212 YESVG  216 (329)
T ss_pred             EECCc
Confidence            98876

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PLN02740 Alcohol dehydrogenase-like

Probab=96.10  E-value=0.039  Score=49.49  Aligned_cols=79  Identities=22%  Similarity=0.302  Sum_probs=52.8

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHHHHHHHhCCceEEEEecCCCH-HHHHHHHHHHHHHhCCcc
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGEDLADKLGQDVCYIHCDISNE-DEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g~id   91 (272)
                      .|+++||.|+ |++|...++.+...|+ +|+++++++++.+.+ ++++... ++  |..+. +++.+.+.++..  +.+|
T Consensus       198 ~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a-~~~Ga~~-~i--~~~~~~~~~~~~v~~~~~--~g~d  270 (381)
T PLN02740        198 AGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKG-KEMGITD-FI--NPKDSDKPVHERIREMTG--GGVD  270 (381)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHH-HHcCCcE-EE--ecccccchHHHHHHHHhC--CCCC
Confidence            5789999985 9999999888888898 599998887766544 5565432 22  33332 123332333222  2699


Q ss_pred             EEEeCCCC
Q 024145           92 IMYNNAGI   99 (272)
Q Consensus        92 ~lv~~ag~   99 (272)
                      ++|.+.|.
T Consensus       271 vvid~~G~  278 (381)
T PLN02740        271 YSFECAGN  278 (381)
T ss_pred             EEEECCCC
Confidence            99999983

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=96.09  E-value=0.042  Score=47.60  Aligned_cols=79  Identities=25%  Similarity=0.268  Sum_probs=52.6

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      .|.+++|.|+++++|.++++.+...|++|+.+.++.+..+.+ ++++..   ...|..+.+..+++. +... ...+|.+
T Consensus       138 ~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~---~~~~~~~~~~~~~~~-~~~~-~~~~d~v  211 (323)
T cd05282         138 PGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEEL-KALGAD---EVIDSSPEDLAQRVK-EATG-GAGARLA  211 (323)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHH-HhcCCC---EEecccchhHHHHHH-HHhc-CCCceEE
Confidence            568999999999999999999999999998888877665544 455432   122223323322222 1111 1259999


Q ss_pred             EeCCC
Q 024145           94 YNNAG   98 (272)
Q Consensus        94 v~~ag   98 (272)
                      +.+.|
T Consensus       212 l~~~g  216 (323)
T cd05282         212 LDAVG  216 (323)
T ss_pred             EECCC
Confidence            98887

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=96.06  E-value=0.05  Score=48.12  Aligned_cols=46  Identities=28%  Similarity=0.492  Sum_probs=38.5

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCC
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQ   61 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~   61 (272)
                      .|++++|.|+ |++|..+++.+...|++|+++++++++.+.+ ++++.
T Consensus       166 ~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~-~~~Ga  211 (349)
T TIGR03201       166 KGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMM-KGFGA  211 (349)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HHhCC
Confidence            5789999999 9999999888888899999998888776644 55664

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=96.05  E-value=0.04  Score=48.06  Aligned_cols=115  Identities=18%  Similarity=0.109  Sum_probs=65.0

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCC--eEEEeecCcchHHHHHHHhCC--ceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Q 024145           17 VAIITGGASGIGAMAVELFHENGA--KVVIADVQDKLGEDLADKLGQ--DVCYIHCDISNEDEVINLVDTAVSKFGKLDI   92 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   92 (272)
                      ++.|+|++|.+|.+++..|+.++.  ++++.+.++... +..+....  ........-.+  +       ..+.+.+.|+
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a~g-~a~DL~~~~~~~~i~~~~~~~--~-------~~~~~~daDi   70 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGAAG-VAADLSHIPTAASVKGFSGEE--G-------LENALKGADV   70 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCCCcE-EEchhhcCCcCceEEEecCCC--c-------hHHHcCCCCE
Confidence            478999999999999999999874  689998866211 11111000  01111100000  0       1223447999


Q ss_pred             EEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccc
Q 024145           93 MYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASAC  152 (272)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~  152 (272)
                      +|..+|....+     ..   .-.+.++.|+.-.-.+.+.+.++   ...+.++.+|-..
T Consensus        71 vvitaG~~~~~-----g~---~R~dll~~N~~I~~~i~~~i~~~---~p~~iiivvsNPv  119 (312)
T TIGR01772        71 VVIPAGVPRKP-----GM---TRDDLFNVNAGIVKDLVAAVAES---CPKAMILVITNPV  119 (312)
T ss_pred             EEEeCCCCCCC-----Cc---cHHHHHHHhHHHHHHHHHHHHHh---CCCeEEEEecCch
Confidence            99999975321     11   23345666766444444444333   3567777777655

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.05  E-value=0.023  Score=43.39  Aligned_cols=40  Identities=30%  Similarity=0.433  Sum_probs=36.1

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcc
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDK   50 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~   50 (272)
                      .+++||.++|.|.+.-+|+.++..|.++|++|..+.++..
T Consensus        24 ~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~   63 (140)
T cd05212          24 VRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTI   63 (140)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCc
Confidence            4789999999999999999999999999999998876543

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=96.05  E-value=0.047  Score=48.68  Aligned_cols=78  Identities=15%  Similarity=0.262  Sum_probs=53.7

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHHHHHHHhCCceEEEEecCCCH-HHHHHHHHHHHHHhCCcc
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGEDLADKLGQDVCYIHCDISNE-DEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g~id   91 (272)
                      .|.++||.|+ |++|...++.+...|+ +|+.+++++++.+.+ ++++...   ..|..+. +++.+.+.++..  +++|
T Consensus       186 ~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~-~~lGa~~---~i~~~~~~~~~~~~v~~~~~--~g~d  258 (368)
T cd08300         186 PGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELA-KKFGATD---CVNPKDHDKPIQQVLVEMTD--GGVD  258 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHcCCCE---EEcccccchHHHHHHHHHhC--CCCc
Confidence            5789999985 9999999988888999 699999888776644 5566432   1233332 234443433322  3699


Q ss_pred             EEEeCCC
Q 024145           92 IMYNNAG   98 (272)
Q Consensus        92 ~lv~~ag   98 (272)
                      ++|.+.|
T Consensus       259 ~vid~~g  265 (368)
T cd08300         259 YTFECIG  265 (368)
T ss_pred             EEEECCC
Confidence            9999887

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=95.99  E-value=0.031  Score=48.05  Aligned_cols=79  Identities=27%  Similarity=0.401  Sum_probs=51.6

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      .|++++|+|+++++|.+++..+...|++|+.+.++.+..+.+ ...+.. .++  +..+.+..+.+ ..... ...+|.+
T Consensus       139 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~-~~~--~~~~~~~~~~i-~~~~~-~~~~d~v  212 (323)
T cd08241         139 PGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALA-RALGAD-HVI--DYRDPDLRERV-KALTG-GRGVDVV  212 (323)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHH-HHcCCc-eee--ecCCccHHHHH-HHHcC-CCCcEEE
Confidence            578999999999999999999999999999998877665544 344432 122  22222222221 21111 1258999


Q ss_pred             EeCCC
Q 024145           94 YNNAG   98 (272)
Q Consensus        94 v~~ag   98 (272)
                      +++.|
T Consensus       213 ~~~~g  217 (323)
T cd08241         213 YDPVG  217 (323)
T ss_pred             EECcc
Confidence            99886

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.98  E-value=0.072  Score=49.35  Aligned_cols=76  Identities=20%  Similarity=0.291  Sum_probs=51.1

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      ..+.+|+++|.| .|+.|+++++.|.+.|+.|.+.+++.....+..++.+  +.++..+ .+.+.+           ...
T Consensus        11 ~~~~~~~v~v~G-~G~sG~a~a~~L~~~G~~V~~~D~~~~~~~~~l~~~g--i~~~~~~-~~~~~~-----------~~~   75 (473)
T PRK00141         11 PQELSGRVLVAG-AGVSGRGIAAMLSELGCDVVVADDNETARHKLIEVTG--VADISTA-EASDQL-----------DSF   75 (473)
T ss_pred             ccccCCeEEEEc-cCHHHHHHHHHHHHCCCEEEEECCChHHHHHHHHhcC--cEEEeCC-CchhHh-----------cCC
Confidence            346778899999 7889999999999999999999976554333333332  3333211 111111           257


Q ss_pred             cEEEeCCCCCC
Q 024145           91 DIMYNNAGILD  101 (272)
Q Consensus        91 d~lv~~ag~~~  101 (272)
                      |.+|...|+..
T Consensus        76 d~vV~Spgi~~   86 (473)
T PRK00141         76 SLVVTSPGWRP   86 (473)
T ss_pred             CEEEeCCCCCC
Confidence            99999999853

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=95.96  E-value=0.049  Score=47.35  Aligned_cols=80  Identities=21%  Similarity=0.334  Sum_probs=52.3

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      .|.+++|.|+++++|.++++.+...|++++++.++++..+.+ .+++...   ..|..+.+...+.+..... ..++|++
T Consensus       140 ~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~---~~~~~~~~~~~~~~~~~~~-~~~~d~~  214 (334)
T PTZ00354        140 KGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFC-KKLAAII---LIRYPDEEGFAPKVKKLTG-EKGVNLV  214 (334)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCcE---EEecCChhHHHHHHHHHhC-CCCceEE
Confidence            568999999999999999999999999988888877766655 4455321   1222232212111222111 1258999


Q ss_pred             EeCCC
Q 024145           94 YNNAG   98 (272)
Q Consensus        94 v~~ag   98 (272)
                      +++.|
T Consensus       215 i~~~~  219 (334)
T PTZ00354        215 LDCVG  219 (334)
T ss_pred             EECCc
Confidence            98875

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=95.95  E-value=0.13  Score=46.98  Aligned_cols=111  Identities=13%  Similarity=0.056  Sum_probs=68.7

Q ss_pred             EEEEeCCCChHHHHHHHHHHHc-------CC--eEEEeecCcchHHHHHHHhCC-------ceEEEEecCCCHHHHHHHH
Q 024145           17 VAIITGGASGIGAMAVELFHEN-------GA--KVVIADVQDKLGEDLADKLGQ-------DVCYIHCDISNEDEVINLV   80 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~-------G~--~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~D~~~~~~~~~~~   80 (272)
                      ++.|+|++|.+|.+++..|+..       |.  ++++++++++.++...-++..       ++ .+..  .+.++     
T Consensus       102 KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v-~i~~--~~ye~-----  173 (444)
T PLN00112        102 NVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREV-SIGI--DPYEV-----  173 (444)
T ss_pred             EEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCce-EEec--CCHHH-----
Confidence            7999999999999999999988       64  689999988876644433311       11 1111  12222     


Q ss_pred             HHHHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecc
Q 024145           81 DTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASA  151 (272)
Q Consensus        81 ~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~  151 (272)
                            +.+.|++|..+|....   +  ..+   =.+.++.|+.-.-.+.+.+.++  ....+.||.+|-.
T Consensus       174 ------~kdaDiVVitAG~prk---p--G~t---R~dLl~~N~~I~k~i~~~I~~~--a~p~~ivIVVsNP  228 (444)
T PLN00112        174 ------FQDAEWALLIGAKPRG---P--GME---RADLLDINGQIFAEQGKALNEV--ASRNVKVIVVGNP  228 (444)
T ss_pred             ------hCcCCEEEECCCCCCC---C--CCC---HHHHHHHHHHHHHHHHHHHHHh--cCCCeEEEEcCCc
Confidence                  3378999999997432   1  122   2345666665444444433332  1356777777654

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=95.95  E-value=0.23  Score=43.51  Aligned_cols=118  Identities=17%  Similarity=0.246  Sum_probs=67.2

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHHH-HHHHh------CCceEEEEecCCCHHHHHHHHHHHHH
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGED-LADKL------GQDVCYIHCDISNEDEVINLVDTAVS   85 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~~-~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (272)
                      +.+++.|.| +|.+|..++..++..|. +|++++.+++..+. ..+..      +....+..  .+|.++          
T Consensus         5 ~~~KI~IIG-aG~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~--~~d~~~----------   71 (321)
T PTZ00082          5 KRRKISLIG-SGNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIG--TNNYED----------   71 (321)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEE--CCCHHH----------
Confidence            457899999 58899999999999995 89999998875421 11111      11122221  122222          


Q ss_pred             HhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCC-CCceEEEEeccc
Q 024145           86 KFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQ-QKGCILFTASAC  152 (272)
Q Consensus        86 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~iss~~  152 (272)
                       ..+.|++|..+|....+ + ..+.+++. .+.+..|+.    +.+.+.+.+.+. +.+.++++|-..
T Consensus        72 -l~~aDiVI~tag~~~~~-~-~~~~~~~r-~~~l~~n~~----i~~~i~~~i~~~~p~a~~iv~sNP~  131 (321)
T PTZ00082         72 -IAGSDVVIVTAGLTKRP-G-KSDKEWNR-DDLLPLNAK----IMDEVAEGIKKYCPNAFVIVITNPL  131 (321)
T ss_pred             -hCCCCEEEECCCCCCCC-C-CCcCCCCH-HHHHHHHHH----HHHHHHHHHHHHCCCeEEEEecCcH
Confidence             23789999999975431 1 11212122 334455544    344455554433 455677766543

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=95.95  E-value=0.13  Score=46.49  Aligned_cols=68  Identities=22%  Similarity=0.361  Sum_probs=48.6

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   91 (272)
                      .+.|++++|.|+ |.||+.+++.+...|++|+++++++.+.+.. ...+.  ..+     +.+   +++       ...|
T Consensus       199 ~l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A-~~~G~--~~~-----~~~---e~v-------~~aD  259 (413)
T cd00401         199 MIAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPICALQA-AMEGY--EVM-----TME---EAV-------KEGD  259 (413)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhhHHHH-HhcCC--EEc-----cHH---HHH-------cCCC
Confidence            368999999995 4899999999999999999999887765443 33342  111     111   111       2579


Q ss_pred             EEEeCCC
Q 024145           92 IMYNNAG   98 (272)
Q Consensus        92 ~lv~~ag   98 (272)
                      ++|.++|
T Consensus       260 VVI~atG  266 (413)
T cd00401         260 IFVTTTG  266 (413)
T ss_pred             EEEECCC
Confidence            9998876

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=95.93  E-value=0.075  Score=46.71  Aligned_cols=75  Identities=33%  Similarity=0.525  Sum_probs=50.6

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      .|.+++|+|+++++|.++++.....|++|+.+.++ . ..+..++.+..   ...|..+.+..+.+    .. .+.+|++
T Consensus       162 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~-~~~~~~~~g~~---~~~~~~~~~~~~~l----~~-~~~vd~v  231 (350)
T cd08248         162 AGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST-D-AIPLVKSLGAD---DVIDYNNEDFEEEL----TE-RGKFDVI  231 (350)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-c-hHHHHHHhCCc---eEEECCChhHHHHH----Hh-cCCCCEE
Confidence            48999999999999999999888899998887764 2 23344555532   12333343333322    22 2469999


Q ss_pred             EeCCC
Q 024145           94 YNNAG   98 (272)
Q Consensus        94 v~~ag   98 (272)
                      +.+.|
T Consensus       232 i~~~g  236 (350)
T cd08248         232 LDTVG  236 (350)
T ss_pred             EECCC
Confidence            98876

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=95.89  E-value=0.043  Score=45.59  Aligned_cols=37  Identities=27%  Similarity=0.500  Sum_probs=33.4

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCC---eEEEeecC
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGA---KVVIADVQ   48 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~---~V~~~~r~   48 (272)
                      .++++++++|.|+ |+.|+++++.|.+.|.   ++++++|+
T Consensus        21 ~~l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~   60 (226)
T cd05311          21 KKIEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSK   60 (226)
T ss_pred             CCccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCC
Confidence            3578999999997 9999999999999997   49999998

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=95.88  E-value=0.056  Score=48.47  Aligned_cols=74  Identities=20%  Similarity=0.371  Sum_probs=50.7

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      .|++++|.|+ |++|...++.....|++|++++++.+...++.++++....   .|..+.+.+.       +..+.+|++
T Consensus       178 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~lGa~~~---i~~~~~~~v~-------~~~~~~D~v  246 (375)
T PLN02178        178 SGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSF---LVTTDSQKMK-------EAVGTMDFI  246 (375)
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhCCCcEE---EcCcCHHHHH-------HhhCCCcEE
Confidence            5789999986 8999999888888899998888776554455566664321   2333332222       222468999


Q ss_pred             EeCCC
Q 024145           94 YNNAG   98 (272)
Q Consensus        94 v~~ag   98 (272)
                      +.+.|
T Consensus       247 id~~G  251 (375)
T PLN02178        247 IDTVS  251 (375)
T ss_pred             EECCC
Confidence            99887

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=95.88  E-value=0.067  Score=45.70  Aligned_cols=81  Identities=17%  Similarity=0.294  Sum_probs=55.3

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      +|++++|.||+|..|.-+-+--.-.|+.|+...-+.++..-+..+.+-..   ..|=-++.++.+++.+...+  .+|+.
T Consensus       153 ~geTv~VSaAsGAvGql~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~G~d~---afNYK~e~~~~~aL~r~~P~--GIDiY  227 (343)
T KOG1196|consen  153 KGETVFVSAASGAVGQLVGQFAKLMGCYVVGSAGSKEKVDLLKTKFGFDD---AFNYKEESDLSAALKRCFPE--GIDIY  227 (343)
T ss_pred             CCCEEEEeeccchhHHHHHHHHHhcCCEEEEecCChhhhhhhHhccCCcc---ceeccCccCHHHHHHHhCCC--cceEE
Confidence            67999999999999987544444459999998888777666666654221   12223344555555554333  69999


Q ss_pred             EeCCCC
Q 024145           94 YNNAGI   99 (272)
Q Consensus        94 v~~ag~   99 (272)
                      |-|.|.
T Consensus       228 feNVGG  233 (343)
T KOG1196|consen  228 FENVGG  233 (343)
T ss_pred             EeccCc
Confidence            999984

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=95.85  E-value=0.11  Score=40.48  Aligned_cols=40  Identities=20%  Similarity=0.365  Sum_probs=31.2

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchH
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLG   52 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~   52 (272)
                      .+.||+++|.| -|.+|+.+|++|...|++|+++..++-..
T Consensus        20 ~l~Gk~vvV~G-YG~vG~g~A~~lr~~Ga~V~V~e~DPi~a   59 (162)
T PF00670_consen   20 MLAGKRVVVIG-YGKVGKGIARALRGLGARVTVTEIDPIRA   59 (162)
T ss_dssp             --TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHH
T ss_pred             eeCCCEEEEeC-CCcccHHHHHHHhhCCCEEEEEECChHHH
Confidence            47899999998 78999999999999999999999887543

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=95.82  E-value=0.059  Score=48.86  Aligned_cols=84  Identities=17%  Similarity=0.173  Sum_probs=50.9

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC---eEEEeecCcchHHHHHHHhCC-----ceEEEEecCCCHHHHHHHHHHHHH
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGA---KVVIADVQDKLGEDLADKLGQ-----DVCYIHCDISNEDEVINLVDTAVS   85 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~---~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~~   85 (272)
                      .|.+++|.|++|++|...++.+...|+   +|+++++++++.+...+..+.     .......|..+.+++.+.+.++..
T Consensus       175 ~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~v~~~t~  254 (410)
T cd08238         175 PGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELLYVNPATIDDLHATLMELTG  254 (410)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCceEEEECCCccccHHHHHHHHhC
Confidence            467999999999999998776666554   799999888876655442221     112122343332233332222211


Q ss_pred             HhCCccEEEeCCC
Q 024145           86 KFGKLDIMYNNAG   98 (272)
Q Consensus        86 ~~g~id~lv~~ag   98 (272)
                       ...+|++|.+.|
T Consensus       255 -g~g~D~vid~~g  266 (410)
T cd08238         255 -GQGFDDVFVFVP  266 (410)
T ss_pred             -CCCCCEEEEcCC
Confidence             125899998876

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=95.80  E-value=0.025  Score=44.20  Aligned_cols=43  Identities=28%  Similarity=0.371  Sum_probs=33.1

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHH
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGE   53 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~   53 (272)
                      .+++||+++|.|.|.-+|+.++..|.++|+.|.+.....+..+
T Consensus        32 ~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~   74 (160)
T PF02882_consen   32 IDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQ   74 (160)
T ss_dssp             -STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHH
T ss_pred             CCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCccc
Confidence            4689999999999999999999999999999988776554433

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=95.79  E-value=0.061  Score=43.86  Aligned_cols=39  Identities=21%  Similarity=0.320  Sum_probs=34.6

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCc
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQD   49 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~   49 (272)
                      +.+++||.+||.|| |.+|...++.|.+.|++|+++++..
T Consensus         5 ~l~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~   43 (202)
T PRK06718          5 MIDLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPEL   43 (202)
T ss_pred             EEEcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence            45789999999997 8999999999999999999887653

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=95.79  E-value=0.052  Score=42.57  Aligned_cols=81  Identities=14%  Similarity=0.141  Sum_probs=56.1

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh----------CCceEEEEecCCCHHHHHHHHHH--H
Q 024145           16 KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL----------GQDVCYIHCDISNEDEVINLVDT--A   83 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~~~~--~   83 (272)
                      +++-+.|- |-+|..++++|+++|++|.+.+|+++..+++.+.-          -....++-.=+.+.+++++++..  +
T Consensus         2 ~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~~i   80 (163)
T PF03446_consen    2 MKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGENI   80 (163)
T ss_dssp             BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCTTH
T ss_pred             CEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhhHH
Confidence            35677775 89999999999999999999999988877766431          01345666667888888888877  6


Q ss_pred             HHHhCCccEEEeCC
Q 024145           84 VSKFGKLDIMYNNA   97 (272)
Q Consensus        84 ~~~~g~id~lv~~a   97 (272)
                      .....+=+++|...
T Consensus        81 ~~~l~~g~iiid~s   94 (163)
T PF03446_consen   81 LAGLRPGKIIIDMS   94 (163)
T ss_dssp             GGGS-TTEEEEE-S
T ss_pred             hhccccceEEEecC
Confidence            55543445555544

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.79  E-value=0.029  Score=48.07  Aligned_cols=38  Identities=29%  Similarity=0.412  Sum_probs=34.8

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecC
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQ   48 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~   48 (272)
                      .+++||.++|+|.+.-+|+.++..|.++|++|+++.++
T Consensus       154 i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~  191 (286)
T PRK14175        154 IDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSR  191 (286)
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC
Confidence            36899999999999999999999999999999888764

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=95.79  E-value=0.092  Score=42.73  Aligned_cols=38  Identities=24%  Similarity=0.432  Sum_probs=33.7

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecC
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQ   48 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~   48 (272)
                      +..|+.++++|.|+ ||+|..+++.|++.|. ++++++++
T Consensus        16 q~~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        16 VQKLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             HHHHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            45678899999997 7899999999999998 69999877

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=95.78  E-value=0.048  Score=50.00  Aligned_cols=77  Identities=21%  Similarity=0.308  Sum_probs=59.9

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDI   92 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   92 (272)
                      ...+.++|.|+ |.+|+.+++.|.+.|++|++++++++..+.+.++. ..+.++..|.++++.++++-      ..+.|.
T Consensus       229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~-~~~~~i~gd~~~~~~L~~~~------~~~a~~  300 (453)
T PRK09496        229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEEL-PNTLVLHGDGTDQELLEEEG------IDEADA  300 (453)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHC-CCCeEEECCCCCHHHHHhcC------CccCCE
Confidence            35688999998 99999999999999999999999988766665543 35678899999988765421      126788


Q ss_pred             EEeCC
Q 024145           93 MYNNA   97 (272)
Q Consensus        93 lv~~a   97 (272)
                      +|...
T Consensus       301 vi~~~  305 (453)
T PRK09496        301 FIALT  305 (453)
T ss_pred             EEECC
Confidence            77554

>cd08230 glucose_DH Glucose dehydrogenase

Probab=95.77  E-value=0.063  Score=47.56  Aligned_cols=73  Identities=23%  Similarity=0.435  Sum_probs=49.5

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecC---cchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQ---DKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      .|++++|+|+ |++|...++.+...|++|++++|+   +++. ++.++++...    .|..+ +++.+    . ...+.+
T Consensus       172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~-~~~~~~Ga~~----v~~~~-~~~~~----~-~~~~~~  239 (355)
T cd08230         172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKA-DIVEELGATY----VNSSK-TPVAE----V-KLVGEF  239 (355)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHH-HHHHHcCCEE----ecCCc-cchhh----h-hhcCCC
Confidence            6789999986 999999998888889999999884   3333 3555666532    23332 22222    1 122469


Q ss_pred             cEEEeCCC
Q 024145           91 DIMYNNAG   98 (272)
Q Consensus        91 d~lv~~ag   98 (272)
                      |++|.+.|
T Consensus       240 d~vid~~g  247 (355)
T cd08230         240 DLIIEATG  247 (355)
T ss_pred             CEEEECcC
Confidence            99999997

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=95.77  E-value=0.097  Score=43.02  Aligned_cols=38  Identities=18%  Similarity=0.383  Sum_probs=32.7

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCe-EEEeecC
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAK-VVIADVQ   48 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~-V~~~~r~   48 (272)
                      ...+++++++|.|+ ||+|..+++.|++.|.. +.+++.+
T Consensus        23 q~~L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D   61 (212)
T PRK08644         23 LEKLKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFD   61 (212)
T ss_pred             HHHHhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            34578889999994 89999999999999984 8888876

>PTZ00117 malate dehydrogenase; Provisional

Probab=95.77  E-value=0.09  Score=46.07  Aligned_cols=114  Identities=18%  Similarity=0.244  Sum_probs=66.3

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcC-CeEEEeecCcchHHHHHHHhC--Cc----eEEEEecCCCHHHHHHHHHHHHH
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENG-AKVVIADVQDKLGEDLADKLG--QD----VCYIHCDISNEDEVINLVDTAVS   85 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~~~--~~----~~~~~~D~~~~~~~~~~~~~~~~   85 (272)
                      .+.+++.|+|| |.+|..++..++..| .++++.+.+++..+...-.+.  ..    ...+.. -+|.++          
T Consensus         3 ~~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~-~~d~~~----------   70 (319)
T PTZ00117          3 VKRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILG-TNNYED----------   70 (319)
T ss_pred             CCCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEEEe-CCCHHH----------
Confidence            35678999997 999999999999999 689999988765432211111  00    011111 122222          


Q ss_pred             HhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCC-CCceEEEEecc
Q 024145           86 KFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQ-QKGCILFTASA  151 (272)
Q Consensus        86 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~iss~  151 (272)
                       +.+.|++|..+|....+     ..+.   .+.+..|..    +.+.+.+.+.+. +.+.++++|-.
T Consensus        71 -l~~ADiVVitag~~~~~-----g~~r---~dll~~n~~----i~~~i~~~i~~~~p~a~vivvsNP  124 (319)
T PTZ00117         71 -IKDSDVVVITAGVQRKE-----EMTR---EDLLTINGK----IMKSVAESVKKYCPNAFVICVTNP  124 (319)
T ss_pred             -hCCCCEEEECCCCCCCC-----CCCH---HHHHHHHHH----HHHHHHHHHHHHCCCeEEEEecCh
Confidence             22689999999865331     1222   345556663    334444444332 45667776554

>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins

Probab=95.76  E-value=0.064  Score=37.21  Aligned_cols=36  Identities=33%  Similarity=0.621  Sum_probs=30.8

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHc-CCeEEEeec
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHEN-GAKVVIADV   47 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~-G~~V~~~~r   47 (272)
                      .++.+|+++|.|+ |+.|+.++..|.+. +.+|.+.+|
T Consensus        19 ~~~~~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~r   55 (86)
T cd05191          19 KSLKGKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCDR   55 (86)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence            3478899999999 99999999999998 566777766

Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=95.75  E-value=0.052  Score=48.17  Aligned_cols=76  Identities=21%  Similarity=0.283  Sum_probs=50.3

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCe-EEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHh--CCc
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAK-VVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKF--GKL   90 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g~i   90 (272)
                      .|+++||.|+ |++|...++.....|++ |+.+++++++.+.+ ++++...   ..|..+.+..+    ++.+..  .++
T Consensus       176 ~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~-~~~Ga~~---~i~~~~~~~~~----~i~~~~~~~g~  246 (358)
T TIGR03451       176 RGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWA-REFGATH---TVNSSGTDPVE----AIRALTGGFGA  246 (358)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHcCCce---EEcCCCcCHHH----HHHHHhCCCCC
Confidence            5789999985 99999988888888985 88888887765544 5565421   22333322222    222222  258


Q ss_pred             cEEEeCCC
Q 024145           91 DIMYNNAG   98 (272)
Q Consensus        91 d~lv~~ag   98 (272)
                      |++|.+.|
T Consensus       247 d~vid~~g  254 (358)
T TIGR03451       247 DVVIDAVG  254 (358)
T ss_pred             CEEEECCC
Confidence            99999887

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=95.74  E-value=0.11  Score=46.16  Aligned_cols=38  Identities=21%  Similarity=0.340  Sum_probs=32.6

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecC
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQ   48 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~   48 (272)
                      ...+++++|+|.|+ ||+|..+++.|+..|. ++.+++.+
T Consensus        23 q~~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D   61 (355)
T PRK05597         23 QQSLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDD   61 (355)
T ss_pred             HHHHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            45578899999997 8999999999999997 58888764

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=95.73  E-value=0.056  Score=48.25  Aligned_cols=77  Identities=22%  Similarity=0.288  Sum_probs=51.1

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHh-CCcc
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKF-GKLD   91 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~id   91 (272)
                      .|++++|.|+ |++|...+..+...|+ +|+++++++++.+.+ ++++...   ..|..+.+..+    ++.+.. +.+|
T Consensus       191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a-~~~Ga~~---~i~~~~~~~~~----~i~~~~~~g~d  261 (371)
T cd08281         191 PGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALA-RELGATA---TVNAGDPNAVE----QVRELTGGGVD  261 (371)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHH-HHcCCce---EeCCCchhHHH----HHHHHhCCCCC
Confidence            5789999985 8999998888888899 588888887766533 5565421   23333332222    232222 3699


Q ss_pred             EEEeCCCC
Q 024145           92 IMYNNAGI   99 (272)
Q Consensus        92 ~lv~~ag~   99 (272)
                      ++|.+.|.
T Consensus       262 ~vid~~G~  269 (371)
T cd08281         262 YAFEMAGS  269 (371)
T ss_pred             EEEECCCC
Confidence            99999873

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=95.68  E-value=0.17  Score=44.24  Aligned_cols=41  Identities=20%  Similarity=0.105  Sum_probs=35.5

Q ss_pred             cCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcc
Q 024145            9 PFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDK   50 (272)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~   50 (272)
                      +...++||++.|.| .|.||+.+++.|...|++|+..+|..+
T Consensus       130 ~~~~l~g~tvgIvG-~G~IG~~vA~~l~afG~~V~~~~~~~~  170 (312)
T PRK15469        130 PEYHREDFTIGILG-AGVLGSKVAQSLQTWGFPLRCWSRSRK  170 (312)
T ss_pred             CCCCcCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence            34568999999998 789999999999999999999887543

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=95.66  E-value=0.076  Score=47.05  Aligned_cols=82  Identities=24%  Similarity=0.328  Sum_probs=50.2

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDI   92 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   92 (272)
                      .|+++||+| ++++|.++++.+...|+ +|+++.+++++.+ +.++++... ++..+-.+..++...+.+... ...+|+
T Consensus       177 ~g~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~-~~~~~g~~~-vi~~~~~~~~~~~~~i~~~~~-~~~~d~  252 (361)
T cd08231         177 AGDTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERLE-LAREFGADA-TIDIDELPDPQRRAIVRDITG-GRGADV  252 (361)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHH-HHHHcCCCe-EEcCcccccHHHHHHHHHHhC-CCCCcE
Confidence            678999997 59999999988888899 8998888776654 334555321 221111111111111222211 125999


Q ss_pred             EEeCCCC
Q 024145           93 MYNNAGI   99 (272)
Q Consensus        93 lv~~ag~   99 (272)
                      ++.+.|.
T Consensus       253 vid~~g~  259 (361)
T cd08231         253 VIEASGH  259 (361)
T ss_pred             EEECCCC
Confidence            9998873

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=95.65  E-value=0.085  Score=46.99  Aligned_cols=78  Identities=19%  Similarity=0.337  Sum_probs=52.0

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHHHHHHHhCCceEEEEecCCCH-HHHHHHHHHHHHHhCCcc
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGEDLADKLGQDVCYIHCDISNE-DEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g~id   91 (272)
                      .|.+++|.|+ |++|...++.+...|+ +|+.+++++++.+.+ ++++... ++  |..+. +++.+.+.++..  +.+|
T Consensus       187 ~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~-~~~Ga~~-~i--~~~~~~~~~~~~v~~~~~--~~~d  259 (369)
T cd08301         187 KGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQA-KKFGVTE-FV--NPKDHDKPVQEVIAEMTG--GGVD  259 (369)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHcCCce-EE--cccccchhHHHHHHHHhC--CCCC
Confidence            5789999985 9999998888888898 799998887766544 5566421 22  32221 233333333322  2699


Q ss_pred             EEEeCCC
Q 024145           92 IMYNNAG   98 (272)
Q Consensus        92 ~lv~~ag   98 (272)
                      +++.+.|
T Consensus       260 ~vid~~G  266 (369)
T cd08301         260 YSFECTG  266 (369)
T ss_pred             EEEECCC
Confidence            9999887

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=95.63  E-value=0.063  Score=49.22  Aligned_cols=41  Identities=20%  Similarity=0.399  Sum_probs=35.5

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchH
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLG   52 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~   52 (272)
                      ..+.||+++|.|.+ .||+.+++.+...|++|+++.+++...
T Consensus       250 ~~LaGKtVgVIG~G-~IGr~vA~rL~a~Ga~ViV~e~dp~~a  290 (476)
T PTZ00075        250 VMIAGKTVVVCGYG-DVGKGCAQALRGFGARVVVTEIDPICA  290 (476)
T ss_pred             CCcCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCchhH
Confidence            35899999999965 699999999999999999998876544

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=95.59  E-value=0.033  Score=45.96  Aligned_cols=41  Identities=20%  Similarity=0.262  Sum_probs=36.2

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHH
Q 024145           17 VAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLAD   57 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~   57 (272)
                      ++.|.||+|.+|.+++..|++.|++|++.+|+++..+.+.+
T Consensus         2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~   42 (219)
T TIGR01915         2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAA   42 (219)
T ss_pred             EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHH
Confidence            58899999999999999999999999999998877766554

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=95.55  E-value=0.31  Score=42.57  Aligned_cols=112  Identities=12%  Similarity=0.046  Sum_probs=66.8

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCC--eEEEeecCcchHHHHHHHhCC------ceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           16 KVAIITGGASGIGAMAVELFHENGA--KVVIADVQDKLGEDLADKLGQ------DVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~------~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      .++.|+|+ |.+|.+++..|+..|.  ++++++.+++..+....++..      ...+...  .|.++           +
T Consensus         4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~--~dy~~-----------~   69 (312)
T cd05293           4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEAD--KDYSV-----------T   69 (312)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEEC--CCHHH-----------h
Confidence            47899996 9999999999998874  699999887655433333311      1111111  22222           2


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccc
Q 024145           88 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASAC  152 (272)
Q Consensus        88 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~  152 (272)
                      .+.|++|..+|....     ...+-   .+.++.|..=...+.+.+.++   ...+.++++|-..
T Consensus        70 ~~adivvitaG~~~k-----~g~~R---~dll~~N~~i~~~~~~~i~~~---~p~~~vivvsNP~  123 (312)
T cd05293          70 ANSKVVIVTAGARQN-----EGESR---LDLVQRNVDIFKGIIPKLVKY---SPNAILLVVSNPV  123 (312)
T ss_pred             CCCCEEEECCCCCCC-----CCCCH---HHHHHHHHHHHHHHHHHHHHh---CCCcEEEEccChH
Confidence            378999999997533     12222   334555555444444444333   3567788777543

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=95.53  E-value=0.071  Score=46.73  Aligned_cols=79  Identities=25%  Similarity=0.370  Sum_probs=52.8

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      .+.++||.|+++++|.++++.+.+.|++|+.+.+++++.+.+ ++++...   ..+..+.+..+.+....  ..+.+|++
T Consensus       165 ~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~---v~~~~~~~~~~~~~~~~--~~~~vd~v  238 (341)
T cd08297         165 PGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELA-KELGADA---FVDFKKSDDVEAVKELT--GGGGAHAV  238 (341)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HHcCCcE---EEcCCCccHHHHHHHHh--cCCCCCEE
Confidence            568999999999999999999999999999998887766544 5555321   12333333222222111  11369999


Q ss_pred             EeCCC
Q 024145           94 YNNAG   98 (272)
Q Consensus        94 v~~ag   98 (272)
                      +++.+
T Consensus       239 l~~~~  243 (341)
T cd08297         239 VVTAV  243 (341)
T ss_pred             EEcCC
Confidence            98665

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=95.53  E-value=0.23  Score=44.86  Aligned_cols=80  Identities=23%  Similarity=0.317  Sum_probs=48.5

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEE-eecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVI-ADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDI   92 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   92 (272)
                      .|++++|. |+|+||..++..+...|+++++ +++++++. ++.++++..    ..|..+.++..+.+.++... ..+|+
T Consensus       185 ~g~~VlV~-G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~-~~a~~~Ga~----~v~~~~~~~~~~~v~~~~~~-~g~Dv  257 (393)
T TIGR02819       185 PGSTVYIA-GAGPVGLAAAASAQLLGAAVVIVGDLNPARL-AQARSFGCE----TVDLSKDATLPEQIEQILGE-PEVDC  257 (393)
T ss_pred             CCCEEEEE-CCCHHHHHHHHHHHHcCCceEEEeCCCHHHH-HHHHHcCCe----EEecCCcccHHHHHHHHcCC-CCCcE
Confidence            57899995 5699999998888888998554 45554444 344556643    23333222222222222111 25899


Q ss_pred             EEeCCCCC
Q 024145           93 MYNNAGIL  100 (272)
Q Consensus        93 lv~~ag~~  100 (272)
                      +|.+.|..
T Consensus       258 vid~~G~~  265 (393)
T TIGR02819       258 AVDCVGFE  265 (393)
T ss_pred             EEECCCCc
Confidence            99999854

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>PRK06932 glycerate dehydrogenase; Provisional

Probab=95.53  E-value=0.24  Score=43.27  Aligned_cols=38  Identities=21%  Similarity=0.289  Sum_probs=33.7

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecC
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQ   48 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~   48 (272)
                      ..++.||++.|.| .|.||+++++.+..-|++|+..+|.
T Consensus       142 ~~~l~gktvgIiG-~G~IG~~va~~l~~fg~~V~~~~~~  179 (314)
T PRK06932        142 ITDVRGSTLGVFG-KGCLGTEVGRLAQALGMKVLYAEHK  179 (314)
T ss_pred             ccccCCCEEEEEC-CCHHHHHHHHHHhcCCCEEEEECCC
Confidence            3579999999999 5999999999999999999888764

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=95.52  E-value=0.031  Score=47.78  Aligned_cols=44  Identities=20%  Similarity=0.352  Sum_probs=38.4

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHHHHHHHh
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGEDLADKL   59 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~   59 (272)
                      +|+++|.|+ ||.+++++..|++.|+ +|.++.|+.++.+++.+.+
T Consensus       122 ~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~  166 (272)
T PRK12550        122 DLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELY  166 (272)
T ss_pred             CCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHh
Confidence            578999995 9999999999999997 5999999998888877654

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=95.52  E-value=0.1  Score=46.86  Aligned_cols=47  Identities=30%  Similarity=0.464  Sum_probs=38.2

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCC
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQ   61 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~   61 (272)
                      .|.+++|+|+++++|.+++..+...|++++++.+++++.+.+ ++++.
T Consensus       193 ~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~-~~~G~  239 (393)
T cd08246         193 PGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYC-RALGA  239 (393)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH-HHcCC
Confidence            578999999999999999988888899988888877665544 44653

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=95.52  E-value=0.21  Score=37.68  Aligned_cols=75  Identities=23%  Similarity=0.380  Sum_probs=47.8

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCc-------------------chHHHH---HHHhC--CceEEEEec
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGA-KVVIADVQD-------------------KLGEDL---ADKLG--QDVCYIHCD   69 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~-------------------~~~~~~---~~~~~--~~~~~~~~D   69 (272)
                      +++++|.| .|++|..+++.|+..|. ++.+++.+.                   .+.+.+   .+++.  .++..+..+
T Consensus         2 ~~~v~iiG-~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~   80 (135)
T PF00899_consen    2 NKRVLIIG-AGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK   80 (135)
T ss_dssp             T-EEEEES-TSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence            56888888 67999999999999998 688876532                   111222   22333  355666666


Q ss_pred             CCCHHHHHHHHHHHHHHhCCccEEEeCCC
Q 024145           70 ISNEDEVINLVDTAVSKFGKLDIMYNNAG   98 (272)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~g~id~lv~~ag   98 (272)
                      + +.+....+++       ..|++|.+..
T Consensus        81 ~-~~~~~~~~~~-------~~d~vi~~~d  101 (135)
T PF00899_consen   81 I-DEENIEELLK-------DYDIVIDCVD  101 (135)
T ss_dssp             C-SHHHHHHHHH-------TSSEEEEESS
T ss_pred             c-cccccccccc-------CCCEEEEecC
Confidence            6 4444444443       6788887753

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=95.52  E-value=0.074  Score=46.37  Aligned_cols=77  Identities=23%  Similarity=0.355  Sum_probs=47.7

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEe
Q 024145           16 KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYN   95 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~   95 (272)
                      ++++++||+|++|...++.....|++|+.+.+++++.+.+ ++++... ++  |..+.+..+. +.+... ..++|+++.
T Consensus       145 ~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~-~~~g~~~-~i--~~~~~~~~~~-v~~~~~-~~~~d~vid  218 (324)
T cd08291         145 KAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLL-KKIGAEY-VL--NSSDPDFLED-LKELIA-KLNATIFFD  218 (324)
T ss_pred             cEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCcE-EE--ECCCccHHHH-HHHHhC-CCCCcEEEE
Confidence            4555569999999998887777799999998887665544 3455432 22  2222222222 222111 125999999


Q ss_pred             CCC
Q 024145           96 NAG   98 (272)
Q Consensus        96 ~ag   98 (272)
                      +.|
T Consensus       219 ~~g  221 (324)
T cd08291         219 AVG  221 (324)
T ss_pred             CCC
Confidence            887

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>PRK07574 formate dehydrogenase; Provisional

Probab=95.51  E-value=0.096  Score=47.04  Aligned_cols=40  Identities=23%  Similarity=0.219  Sum_probs=35.3

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcc
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDK   50 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~   50 (272)
                      ..++.||++.|.|. |.||+++++.|...|++|+..+|...
T Consensus       187 ~~~L~gktVGIvG~-G~IG~~vA~~l~~fG~~V~~~dr~~~  226 (385)
T PRK07574        187 SYDLEGMTVGIVGA-GRIGLAVLRRLKPFDVKLHYTDRHRL  226 (385)
T ss_pred             ceecCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCCCC
Confidence            35689999999995 78999999999999999999988753

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=95.49  E-value=0.15  Score=42.32  Aligned_cols=38  Identities=26%  Similarity=0.489  Sum_probs=31.9

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecC
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQ   48 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~   48 (272)
                      ...+++++|+|.| .||+|..+++.|+..|. ++.+++.+
T Consensus        16 q~~L~~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D   54 (228)
T cd00757          16 QEKLKNARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDD   54 (228)
T ss_pred             HHHHhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            4567889999999 78999999999999997 57777543

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=95.45  E-value=0.097  Score=46.00  Aligned_cols=76  Identities=24%  Similarity=0.360  Sum_probs=49.2

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      .|++++|.|+++++|.+++..+...|++|+.+.++. +.+ ..++++.. .+.  +. +...... .. .. ....+|++
T Consensus       177 ~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~-~~~-~~~~~g~~-~~~--~~-~~~~~~~-~~-~~-~~~~~d~v  247 (350)
T cd08274         177 AGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAA-KEE-AVRALGAD-TVI--LR-DAPLLAD-AK-AL-GGEPVDVV  247 (350)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCch-hhH-HHHhcCCe-EEE--eC-CCccHHH-HH-hh-CCCCCcEE
Confidence            578999999999999999998889999988887654 333 33555543 122  22 2222222 11 11 11359999


Q ss_pred             EeCCC
Q 024145           94 YNNAG   98 (272)
Q Consensus        94 v~~ag   98 (272)
                      |.+.|
T Consensus       248 i~~~g  252 (350)
T cd08274         248 ADVVG  252 (350)
T ss_pred             EecCC
Confidence            98886

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=95.44  E-value=0.12  Score=46.55  Aligned_cols=47  Identities=28%  Similarity=0.398  Sum_probs=37.3

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCC
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQ   61 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~   61 (272)
                      .|.+++|+|+++++|.++++.+...|++++.+.++.++.+.+ ++++.
T Consensus       189 ~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~-~~~g~  235 (398)
T TIGR01751       189 PGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYC-RELGA  235 (398)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HHcCC
Confidence            568999999999999999988888899988887766655444 44553

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=95.42  E-value=0.058  Score=38.00  Aligned_cols=38  Identities=24%  Similarity=0.420  Sum_probs=34.1

Q ss_pred             CCChHHHHHHHHHHHcC---CeEEEe-ecCcchHHHHHHHhC
Q 024145           23 GASGIGAMAVELFHENG---AKVVIA-DVQDKLGEDLADKLG   60 (272)
Q Consensus        23 as~giG~aia~~la~~G---~~V~~~-~r~~~~~~~~~~~~~   60 (272)
                      |+|.+|.++++.|++.|   .+|.++ .|++++.+++.++.+
T Consensus         6 G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~   47 (96)
T PF03807_consen    6 GAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYG   47 (96)
T ss_dssp             STSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCT
T ss_pred             CCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhc
Confidence            79999999999999999   899855 999999988888776

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>PRK08655 prephenate dehydrogenase; Provisional

Probab=95.41  E-value=0.13  Score=47.12  Aligned_cols=42  Identities=26%  Similarity=0.529  Sum_probs=35.5

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHH
Q 024145           17 VAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADK   58 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~   58 (272)
                      ++.|.||.|.+|.++++.|.+.|++|++.+|+++...+...+
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~   43 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKE   43 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHH
Confidence            689999999999999999999999999999987665444433

>PRK08410 2-hydroxyacid dehydrogenase; Provisional

Probab=95.40  E-value=0.27  Score=42.93  Aligned_cols=38  Identities=29%  Similarity=0.324  Sum_probs=34.2

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCc
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQD   49 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~   49 (272)
                      .++.||++.|.| .|.||+++++.+..-|.+|+..+|..
T Consensus       141 ~~L~gktvGIiG-~G~IG~~vA~~~~~fgm~V~~~d~~~  178 (311)
T PRK08410        141 GEIKGKKWGIIG-LGTIGKRVAKIAQAFGAKVVYYSTSG  178 (311)
T ss_pred             cccCCCEEEEEC-CCHHHHHHHHHHhhcCCEEEEECCCc
Confidence            579999999999 59999999999999999999988753

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.39  E-value=0.042  Score=47.40  Aligned_cols=40  Identities=20%  Similarity=0.339  Sum_probs=36.3

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcc
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDK   50 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~   50 (272)
                      .++.||.++|.|.++-+|+.++..|.++|++|.+..|+..
T Consensus       155 i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~  194 (301)
T PRK14194        155 GDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRST  194 (301)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCC
Confidence            4689999999999999999999999999999998876654

>PRK06223 malate dehydrogenase; Reviewed

Probab=95.38  E-value=0.33  Score=42.18  Aligned_cols=38  Identities=24%  Similarity=0.351  Sum_probs=32.1

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHHH
Q 024145           16 KVAIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGED   54 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~~   54 (272)
                      +++.|.|+ |.+|..++..++..|. +|++++++++..+.
T Consensus         3 ~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~   41 (307)
T PRK06223          3 KKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQG   41 (307)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHH
Confidence            47899998 9999999999999875 89999998776543

>PRK02006 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.37  E-value=0.35  Score=45.11  Aligned_cols=124  Identities=11%  Similarity=0.105  Sum_probs=68.9

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcch--HHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKL--GEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGK   89 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (272)
                      ++++|+++|.| -|+.|.++++.|.++|++|.+.+.+...  .+. .+..+..+.+...+. +++.    +       ..
T Consensus         4 ~~~~~~i~v~G-~G~sG~s~a~~L~~~G~~v~~~D~~~~~~~~~~-L~~~~~~~~~~~g~~-~~~~----~-------~~   69 (498)
T PRK02006          4 DLQGPMVLVLG-LGESGLAMARWCARHGARLRVADTREAPPNLAA-LRAELPDAEFVGGPF-DPAL----L-------DG   69 (498)
T ss_pred             ccCCCEEEEEe-ecHhHHHHHHHHHHCCCEEEEEcCCCCchhHHH-HHhhcCCcEEEeCCC-chhH----h-------cC
Confidence            35788999999 5679999999999999999998865432  122 223322233322211 1111    1       15


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHH--HHHhHHHHHHHHHHHHhhcCCC-CceEEEEeccccc
Q 024145           90 LDIMYNNAGILDRSFGSILDTPKSDLERLI--NVNTIGGFLGAKHAARVMVPQQ-KGCILFTASACTE  154 (272)
Q Consensus        90 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~--~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~  154 (272)
                      .|.+|...|+...     .+.....+.+.-  .+.+.+-..++...+..+.... ...+|.|+.+.|.
T Consensus        70 ~d~vv~sp~I~~~-----~~~~~~~~~~a~~~~i~v~~~~e~~~~~~~~l~~~~~~~~~I~VTGTnGK  132 (498)
T PRK02006         70 VDLVALSPGLSPL-----EAALAPLVAAARERGIPVWGEIELFAQALAALGASGYAPKVLAITGTNGK  132 (498)
T ss_pred             CCEEEECCCCCCc-----ccccCHHHHHHHHCCCcEEEHHHHHHHHHhhhccccCCCCEEEEECCCcH
Confidence            7999999987431     111112333332  3455555555444444332211 2357877776653

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=95.36  E-value=0.2  Score=41.98  Aligned_cols=39  Identities=21%  Similarity=0.436  Sum_probs=32.3

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCc
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQD   49 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~   49 (272)
                      ...+++++|+|.| .||+|..+++.|+..|. ++++++.+.
T Consensus        19 q~~L~~~~VlvvG-~GglGs~va~~La~~Gvg~i~lvD~D~   58 (240)
T TIGR02355        19 QEALKASRVLIVG-LGGLGCAASQYLAAAGVGNLTLLDFDT   58 (240)
T ss_pred             HHHHhCCcEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence            3457888999998 57999999999999997 588887654

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=95.36  E-value=0.093  Score=45.06  Aligned_cols=48  Identities=35%  Similarity=0.513  Sum_probs=39.7

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCC
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQ   61 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~   61 (272)
                      +.|.+++|.|+++++|.+++..+...|++|+.+.+++++.+.+. +++.
T Consensus       131 ~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~  178 (305)
T cd08270         131 LLGRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAEGLR-ELGA  178 (305)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCC
Confidence            35899999999999999999999999999999988776655543 3553

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.36  E-value=0.078  Score=45.76  Aligned_cols=79  Identities=18%  Similarity=0.122  Sum_probs=54.0

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEee-cCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIAD-VQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGK   89 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (272)
                      .++.||+++|.|-++-+|+.++..|+++|++|.+.. |+. ..++..+    ...++.+=+.+++.++...       -+
T Consensus       154 i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~-~l~e~~~----~ADIVIsavg~~~~v~~~~-------lk  221 (296)
T PRK14188        154 GDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTR-DLPAVCR----RADILVAAVGRPEMVKGDW-------IK  221 (296)
T ss_pred             CCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCC-CHHHHHh----cCCEEEEecCChhhcchhe-------ec
Confidence            368999999999999999999999999999999885 554 3333332    2234444455555544322       14


Q ss_pred             ccEEEeCCCCCC
Q 024145           90 LDIMYNNAGILD  101 (272)
Q Consensus        90 id~lv~~ag~~~  101 (272)
                      .+.+|-..|+..
T Consensus       222 ~GavVIDvGin~  233 (296)
T PRK14188        222 PGATVIDVGINR  233 (296)
T ss_pred             CCCEEEEcCCcc
Confidence            556666677653

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=95.33  E-value=0.079  Score=46.76  Aligned_cols=76  Identities=24%  Similarity=0.434  Sum_probs=51.0

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHh--CCc
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKF--GKL   90 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g~i   90 (272)
                      .|++++|+|+ +++|..+++.+...|+ +|+++++++++.+.+ ++++...   ..|..+.+..+    ++.+..  +.+
T Consensus       172 ~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~-~~~ga~~---~i~~~~~~~~~----~l~~~~~~~~~  242 (351)
T cd08233         172 PGDTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEARRELA-EELGATI---VLDPTEVDVVA----EVRKLTGGGGV  242 (351)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHhCCCE---EECCCccCHHH----HHHHHhCCCCC
Confidence            5789999985 8999999998889999 788888777765544 4455432   22433333222    233222  249


Q ss_pred             cEEEeCCC
Q 024145           91 DIMYNNAG   98 (272)
Q Consensus        91 d~lv~~ag   98 (272)
                      |+++.+.|
T Consensus       243 d~vid~~g  250 (351)
T cd08233         243 DVSFDCAG  250 (351)
T ss_pred             CEEEECCC
Confidence            99999987

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]

Probab=95.32  E-value=0.14  Score=44.94  Aligned_cols=39  Identities=28%  Similarity=0.295  Sum_probs=35.6

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcc
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDK   50 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~   50 (272)
                      .+++||++-|.| .|.||+++++++..-|.+|+..+|++.
T Consensus       142 ~~l~gktvGIiG-~GrIG~avA~r~~~Fgm~v~y~~~~~~  180 (324)
T COG1052         142 FDLRGKTLGIIG-LGRIGQAVARRLKGFGMKVLYYDRSPN  180 (324)
T ss_pred             cCCCCCEEEEEC-CCHHHHHHHHHHhcCCCEEEEECCCCC
Confidence            578999999999 889999999999988999999998875

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=95.30  E-value=0.097  Score=45.43  Aligned_cols=112  Identities=20%  Similarity=0.256  Sum_probs=65.9

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCC--eEEEeecCcchHHHHHHHhCCce------EEEEecCCCHHHHHHHHHHHHHHh
Q 024145           16 KVAIITGGASGIGAMAVELFHENGA--KVVIADVQDKLGEDLADKLGQDV------CYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~------~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      +++.|+|+ |++|.+++..|+.++.  ++++.+..++..+....++....      ..+..| .+.++           +
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~-~~y~~-----------~   67 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGD-GDYED-----------L   67 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecC-CChhh-----------h
Confidence            47899999 9999999999988863  79999988555443332221111      112222 12222           2


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecc
Q 024145           88 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASA  151 (272)
Q Consensus        88 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~  151 (272)
                      .+.|++|..||....+ +    .+-   .+.++.|..-.-.+.+.+...-   ..+.++.+|-.
T Consensus        68 ~~aDiVvitAG~prKp-G----mtR---~DLl~~Na~I~~~i~~~i~~~~---~d~ivlVvtNP  120 (313)
T COG0039          68 KGADIVVITAGVPRKP-G----MTR---LDLLEKNAKIVKDIAKAIAKYA---PDAIVLVVTNP  120 (313)
T ss_pred             cCCCEEEEeCCCCCCC-C----CCH---HHHHHhhHHHHHHHHHHHHhhC---CCeEEEEecCc
Confidence            3789999999976542 2    222   3345666665555555444322   35666666543

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=95.29  E-value=0.078  Score=46.13  Aligned_cols=79  Identities=20%  Similarity=0.281  Sum_probs=51.2

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      .|.+++|.|+++.+|.++++.+...|++|+.+.+++++.+.+ ++++.. .++  +..+....+. +.+.... ..+|++
T Consensus       140 ~g~~vlI~g~~g~ig~~~~~lak~~G~~v~~~~~~~~~~~~~-~~~g~~-~~~--~~~~~~~~~~-~~~~~~~-~~~d~v  213 (327)
T PRK10754        140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQRA-KKAGAW-QVI--NYREENIVER-VKEITGG-KKVRVV  213 (327)
T ss_pred             CCCEEEEEeCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHCCCC-EEE--cCCCCcHHHH-HHHHcCC-CCeEEE
Confidence            578999999999999999888888899999888877665544 555532 222  2222222222 2222111 258999


Q ss_pred             EeCCC
Q 024145           94 YNNAG   98 (272)
Q Consensus        94 v~~ag   98 (272)
                      +.+.|
T Consensus       214 l~~~~  218 (327)
T PRK10754        214 YDSVG  218 (327)
T ss_pred             EECCc
Confidence            98776

>PRK08328 hypothetical protein; Provisional

Probab=95.28  E-value=0.094  Score=43.70  Aligned_cols=72  Identities=13%  Similarity=0.194  Sum_probs=45.3

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHH
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (272)
                      +..+++++|+|.| .||+|.++++.|+..|. ++.+++.+.-....+    +.++.+..-|+......+.+.+++.+.
T Consensus        22 q~~L~~~~VlIiG-~GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL----~Rq~l~~~~dvG~~~k~~~a~~~l~~~   94 (231)
T PRK08328         22 QEKLKKAKVAVVG-VGGLGSPVAYYLAAAGVGRILLIDEQTPELSNL----NRQILHWEEDLGKNPKPLSAKWKLERF   94 (231)
T ss_pred             HHHHhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCccChhhh----ccccccChhhcCchHHHHHHHHHHHHh
Confidence            3457788999998 56999999999999997 588888765443222    222333334554433333334444444

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=95.27  E-value=0.12  Score=45.15  Aligned_cols=82  Identities=20%  Similarity=0.247  Sum_probs=49.9

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcc---hHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDK---LGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      .|+++||.|+++++|.++++.+...|++|+.+.++.+   ...+..++++....+..-+.+ ..+....+.....  +.+
T Consensus       146 ~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~i~~~~~--~~~  222 (341)
T cd08290         146 PGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERLKALGADHVLTEEELR-SLLATELLKSAPG--GRP  222 (341)
T ss_pred             CCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCCcchhHHHHHHhcCCCEEEeCcccc-cccHHHHHHHHcC--CCc
Confidence            6789999999999999999999999999888877653   222333455543222111110 0022222222111  158


Q ss_pred             cEEEeCCC
Q 024145           91 DIMYNNAG   98 (272)
Q Consensus        91 d~lv~~ag   98 (272)
                      |.++.+.|
T Consensus       223 d~vld~~g  230 (341)
T cd08290         223 KLALNCVG  230 (341)
T ss_pred             eEEEECcC
Confidence            99998887

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=95.27  E-value=0.11  Score=44.97  Aligned_cols=76  Identities=18%  Similarity=0.270  Sum_probs=49.6

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEE
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMY   94 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv   94 (272)
                      +.+++|.|+++++|.++++.....|++|+.+.++++..+.+ .+++... +  .|..+.+  .........  +.+|+++
T Consensus       147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~-~--~~~~~~~--~~~~~~~~~--~~~d~vi  218 (325)
T cd05280         147 DGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQADYL-KSLGASE-V--LDREDLL--DESKKPLLK--ARWAGAI  218 (325)
T ss_pred             CCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HhcCCcE-E--EcchhHH--HHHHHHhcC--CCccEEE
Confidence            46899999999999999988888899999998887765544 4555421 1  2222211  111121111  2589998


Q ss_pred             eCCC
Q 024145           95 NNAG   98 (272)
Q Consensus        95 ~~ag   98 (272)
                      ++.|
T Consensus       219 ~~~~  222 (325)
T cd05280         219 DTVG  222 (325)
T ss_pred             ECCc
Confidence            8765

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=95.26  E-value=0.02  Score=41.35  Aligned_cols=38  Identities=32%  Similarity=0.483  Sum_probs=32.3

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCc
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQD   49 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~   49 (272)
                      .+++||++||.|+ |.+|..-++.|++.|++|++++...
T Consensus         3 l~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~   40 (103)
T PF13241_consen    3 LDLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI   40 (103)
T ss_dssp             E--TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch
Confidence            4689999999997 8999999999999999999998775

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=95.26  E-value=0.28  Score=44.03  Aligned_cols=111  Identities=14%  Similarity=0.087  Sum_probs=64.9

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCC-e----EE--Ee--ecCcchHHHHHHHhCC-------ceEEEEecCCCHHHHHHHH
Q 024145           17 VAIITGGASGIGAMAVELFHENGA-K----VV--IA--DVQDKLGEDLADKLGQ-------DVCYIHCDISNEDEVINLV   80 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~-~----V~--~~--~r~~~~~~~~~~~~~~-------~~~~~~~D~~~~~~~~~~~   80 (272)
                      ++.|+|++|.+|.+++..|+..|. .    |.  ++  +++.+.++...-++..       ++. +..  .+.+      
T Consensus        46 KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~-i~~--~~y~------  116 (387)
T TIGR01757        46 NVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVS-IGI--DPYE------  116 (387)
T ss_pred             EEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceE-Eec--CCHH------
Confidence            799999999999999999998873 3    33  34  7776665544333311       111 111  1222      


Q ss_pred             HHHHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecc
Q 024145           81 DTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASA  151 (272)
Q Consensus        81 ~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~  151 (272)
                           .+.+.|++|..||....   +  ..+   -.+.++.|+.-.-.+.+.+.++-  ++.+.+|.+|-.
T Consensus       117 -----~~kdaDIVVitAG~prk---p--g~t---R~dll~~N~~I~k~i~~~I~~~a--~~~~iviVVsNP  172 (387)
T TIGR01757       117 -----VFEDADWALLIGAKPRG---P--GME---RADLLDINGQIFADQGKALNAVA--SKNCKVLVVGNP  172 (387)
T ss_pred             -----HhCCCCEEEECCCCCCC---C--CCC---HHHHHHHHHHHHHHHHHHHHHhC--CCCeEEEEcCCc
Confidence                 23478999999997532   1  122   23455666654444444443321  256777777653

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=95.26  E-value=0.14  Score=44.75  Aligned_cols=75  Identities=25%  Similarity=0.387  Sum_probs=50.3

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      .|++++|.| ++.+|.++++.+...|++|+.+++++++.+.+ ++++.. .+  .|..+.+ ..+   .+.+. +.+|.+
T Consensus       163 ~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~-~~~g~~-~~--i~~~~~~-~~~---~~~~~-~~~d~v  232 (333)
T cd08296         163 PGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISRGSDKADLA-RKLGAH-HY--IDTSKED-VAE---ALQEL-GGAKLI  232 (333)
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCChHHHHHH-HHcCCc-EE--ecCCCcc-HHH---HHHhc-CCCCEE
Confidence            578999999 89999999888888899999998887665544 556642 12  2332222 222   12221 368999


Q ss_pred             EeCCC
Q 024145           94 YNNAG   98 (272)
Q Consensus        94 v~~ag   98 (272)
                      +.+.|
T Consensus       233 i~~~g  237 (333)
T cd08296         233 LATAP  237 (333)
T ss_pred             EECCC
Confidence            98765

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>PRK13243 glyoxylate reductase; Reviewed

Probab=95.25  E-value=0.21  Score=44.01  Aligned_cols=39  Identities=21%  Similarity=0.172  Sum_probs=35.3

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcc
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDK   50 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~   50 (272)
                      .++.||++.|.|- |.||+.+++.|...|++|+..+|...
T Consensus       146 ~~L~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~  184 (333)
T PRK13243        146 YDVYGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRK  184 (333)
T ss_pred             cCCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCC
Confidence            4689999999996 99999999999999999999888654

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=95.23  E-value=0.14  Score=45.60  Aligned_cols=78  Identities=17%  Similarity=0.328  Sum_probs=50.1

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHHHHHHHhCCceEEEEecCCCH-HHHHHHHHHHHHHhCCcc
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGEDLADKLGQDVCYIHCDISNE-DEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g~id   91 (272)
                      .|.+++|.| +|++|...++.....|+ +|+.+++++.+.+.+ ++++... +  .|..+. ..+.+.+.+...  +.+|
T Consensus       184 ~g~~vlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~-~~~ga~~-~--i~~~~~~~~~~~~~~~~~~--~g~d  256 (365)
T cd08277         184 PGSTVAVFG-LGAVGLSAIMGAKIAGASRIIGVDINEDKFEKA-KEFGATD-F--INPKDSDKPVSEVIREMTG--GGVD  256 (365)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHcCCCc-E--eccccccchHHHHHHHHhC--CCCC
Confidence            578999997 59999999888778898 688888877665544 4555421 1  222221 112222222222  3699


Q ss_pred             EEEeCCC
Q 024145           92 IMYNNAG   98 (272)
Q Consensus        92 ~lv~~ag   98 (272)
                      ++|.+.|
T Consensus       257 ~vid~~g  263 (365)
T cd08277         257 YSFECTG  263 (365)
T ss_pred             EEEECCC
Confidence            9999887

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=95.21  E-value=0.71  Score=40.21  Aligned_cols=109  Identities=15%  Similarity=0.123  Sum_probs=65.4

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcC--CeEEEeecCcchHHHHHHHhC-C-----ceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145           17 VAIITGGASGIGAMAVELFHENG--AKVVIADVQDKLGEDLADKLG-Q-----DVCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G--~~V~~~~r~~~~~~~~~~~~~-~-----~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      ++.|.|+ |.+|..++..|+.+|  .+|++++++++..+.....+. .     ..... .  .+.+           ...
T Consensus         2 kI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~-~--~d~~-----------~l~   66 (308)
T cd05292           2 KVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIY-A--GDYA-----------DCK   66 (308)
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEe-e--CCHH-----------HhC
Confidence            5788997 899999999999999  579999998876553222221 1     11111 1  1222           123


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecc
Q 024145           89 KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASA  151 (272)
Q Consensus        89 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~  151 (272)
                      ..|++|..+|....+     ..   ...+.+..|+.-.-.+.+.+..+   ...|.++.++..
T Consensus        67 ~aDiViita~~~~~~-----~~---~r~dl~~~n~~i~~~~~~~l~~~---~~~giiiv~tNP  118 (308)
T cd05292          67 GADVVVITAGANQKP-----GE---TRLDLLKRNVAIFKEIIPQILKY---APDAILLVVTNP  118 (308)
T ss_pred             CCCEEEEccCCCCCC-----CC---CHHHHHHHHHHHHHHHHHHHHHH---CCCeEEEEecCc
Confidence            789999999864321     11   22344555655554555544442   245777777543

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=95.20  E-value=0.17  Score=41.39  Aligned_cols=59  Identities=17%  Similarity=0.317  Sum_probs=42.7

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcc-hHHHHHHHhCCceEEEEecCC
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDK-LGEDLADKLGQDVCYIHCDIS   71 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~D~~   71 (272)
                      +.+++||++||.| .|.+|..-++.|++.|++|++++.+.. ..+++.++  .++.++.-+..
T Consensus         4 ~l~l~gk~vlVvG-gG~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~~--~~i~~~~~~~~   63 (205)
T TIGR01470         4 FANLEGRAVLVVG-GGDVALRKARLLLKAGAQLRVIAEELESELTLLAEQ--GGITWLARCFD   63 (205)
T ss_pred             EEEcCCCeEEEEC-cCHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHHc--CCEEEEeCCCC
Confidence            4568999999999 467889999999999999999886544 22233222  36667666554

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=95.20  E-value=0.1  Score=45.92  Aligned_cols=78  Identities=27%  Similarity=0.321  Sum_probs=48.7

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCe-EEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCcc-
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAK-VVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLD-   91 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id-   91 (272)
                      .|++++|+| .|++|..+++.+...|++ |+.+++++++.+. .++++.. .++  |..+.. .+.+.+...  ..++| 
T Consensus       160 ~g~~vlV~G-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~-~~~~Ga~-~~i--~~~~~~-~~~~~~~~~--~~~~d~  231 (347)
T PRK10309        160 EGKNVIIIG-AGTIGLLAIQCAVALGAKSVTAIDINSEKLAL-AKSLGAM-QTF--NSREMS-APQIQSVLR--ELRFDQ  231 (347)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCHHHHHH-HHHcCCc-eEe--cCcccC-HHHHHHHhc--CCCCCe
Confidence            578999997 599999999888888997 6778887776654 4556542 222  222211 222222111  12577 


Q ss_pred             EEEeCCCC
Q 024145           92 IMYNNAGI   99 (272)
Q Consensus        92 ~lv~~ag~   99 (272)
                      ++|.+.|.
T Consensus       232 ~v~d~~G~  239 (347)
T PRK10309        232 LILETAGV  239 (347)
T ss_pred             EEEECCCC
Confidence            78888873

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=95.17  E-value=0.33  Score=42.77  Aligned_cols=40  Identities=23%  Similarity=0.346  Sum_probs=35.2

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcch
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKL   51 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~   51 (272)
                      ..+.|+++.|.| .|.||+++++.|...|++|++.+|++..
T Consensus       142 ~~l~g~~VgIIG-~G~IG~~vA~~L~~~G~~V~~~d~~~~~  181 (330)
T PRK12480        142 KPVKNMTVAIIG-TGRIGAATAKIYAGFGATITAYDAYPNK  181 (330)
T ss_pred             cccCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEeCChhH
Confidence            468999999998 5789999999999999999999987643

>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein

Probab=95.14  E-value=0.17  Score=44.22  Aligned_cols=76  Identities=17%  Similarity=0.317  Sum_probs=49.0

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHc-CCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           15 GKVAIITGGASGIGAMAVELFHEN-GAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      |.+++|+|+++++|.++++..... |++|+.+.++++..+.+ ++++... ++.-+  +  +..+.+.+.  ..+++|++
T Consensus       149 g~~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l-~~~g~~~-~~~~~--~--~~~~~i~~~--~~~~vd~v  220 (336)
T TIGR02817       149 KRALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQEWV-LELGAHH-VIDHS--K--PLKAQLEKL--GLEAVSYV  220 (336)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHH-HHcCCCE-EEECC--C--CHHHHHHHh--cCCCCCEE
Confidence            789999999999999987666666 99999998877665555 5565422 22211  1  222222222  11369999


Q ss_pred             EeCCC
Q 024145           94 YNNAG   98 (272)
Q Consensus        94 v~~ag   98 (272)
                      +.+.+
T Consensus       221 l~~~~  225 (336)
T TIGR02817       221 FSLTH  225 (336)
T ss_pred             EEcCC
Confidence            87654

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=95.14  E-value=0.097  Score=44.74  Aligned_cols=77  Identities=22%  Similarity=0.235  Sum_probs=48.6

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCe-EEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGAK-VVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   91 (272)
                      ..|++++|.|+ |++|...++.+...|++ |+++++++++.+ +.++++...   ..|..+.   .+.+.++.. ...+|
T Consensus       119 ~~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~-~a~~~Ga~~---~i~~~~~---~~~~~~~~~-~~g~d  189 (280)
T TIGR03366       119 LKGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRRE-LALSFGATA---LAEPEVL---AERQGGLQN-GRGVD  189 (280)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH-HHHHcCCcE---ecCchhh---HHHHHHHhC-CCCCC
Confidence            36889999986 89999998888888987 888877766543 445565422   1122221   111222111 12589


Q ss_pred             EEEeCCC
Q 024145           92 IMYNNAG   98 (272)
Q Consensus        92 ~lv~~ag   98 (272)
                      ++|.+.|
T Consensus       190 ~vid~~G  196 (280)
T TIGR03366       190 VALEFSG  196 (280)
T ss_pred             EEEECCC
Confidence            9999887

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=95.12  E-value=0.19  Score=39.86  Aligned_cols=32  Identities=25%  Similarity=0.418  Sum_probs=27.4

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCc
Q 024145           17 VAIITGGASGIGAMAVELFHENGA-KVVIADVQD   49 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~-~V~~~~r~~   49 (272)
                      +++|.| .||+|..+++.|++.|. ++.+++.+.
T Consensus         1 ~VlViG-~GglGs~ia~~La~~Gvg~i~lvD~D~   33 (174)
T cd01487           1 KVGIAG-AGGLGSNIAVLLARSGVGNLKLVDFDV   33 (174)
T ss_pred             CEEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            367888 58999999999999998 599998765

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PLN02602 lactate dehydrogenase

Probab=95.11  E-value=0.35  Score=42.95  Aligned_cols=111  Identities=12%  Similarity=0.062  Sum_probs=66.1

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCC--eEEEeecCcchHHHHHHHhCC------ceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           16 KVAIITGGASGIGAMAVELFHENGA--KVVIADVQDKLGEDLADKLGQ------DVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~------~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      +++.|+|+ |.+|.+++..|+..|.  ++++++.+++.++....++..      .. .+..+ .+.++           +
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~-~i~~~-~dy~~-----------~  103 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRT-KILAS-TDYAV-----------T  103 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCC-EEEeC-CCHHH-----------h
Confidence            69999996 9999999999998874  699999887655433333311      11 22211 12222           2


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecc
Q 024145           88 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASA  151 (272)
Q Consensus        88 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~  151 (272)
                      .+-|++|..||....+     ..+-   .+.+..|+.=...+.+.+..+   ...+.++++|-.
T Consensus       104 ~daDiVVitAG~~~k~-----g~tR---~dll~~N~~I~~~i~~~I~~~---~p~~ivivvtNP  156 (350)
T PLN02602        104 AGSDLCIVTAGARQIP-----GESR---LNLLQRNVALFRKIIPELAKY---SPDTILLIVSNP  156 (350)
T ss_pred             CCCCEEEECCCCCCCc-----CCCH---HHHHHHHHHHHHHHHHHHHHH---CCCeEEEEecCc
Confidence            3789999999975331     1222   234455554444444433332   346777777654

>PLN02827 Alcohol dehydrogenase-like

Probab=95.09  E-value=0.19  Score=45.09  Aligned_cols=79  Identities=16%  Similarity=0.287  Sum_probs=51.7

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCe-EEEeecCcchHHHHHHHhCCceEEEEecCCCH-HHHHHHHHHHHHHhCCcc
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAK-VVIADVQDKLGEDLADKLGQDVCYIHCDISNE-DEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g~id   91 (272)
                      .|+++||.|+ |++|...++.+...|++ |+++++++++.+ +.++++... +  .|..+. +++.+.+.++..  +.+|
T Consensus       193 ~g~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~~~~~~~~-~a~~lGa~~-~--i~~~~~~~~~~~~v~~~~~--~g~d  265 (378)
T PLN02827        193 KGSSVVIFGL-GTVGLSVAQGAKLRGASQIIGVDINPEKAE-KAKTFGVTD-F--INPNDLSEPIQQVIKRMTG--GGAD  265 (378)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHH-HHHHcCCcE-E--EcccccchHHHHHHHHHhC--CCCC
Confidence            5889999985 99999998888888985 777777766554 445566422 1  233332 334333333322  3699


Q ss_pred             EEEeCCCC
Q 024145           92 IMYNNAGI   99 (272)
Q Consensus        92 ~lv~~ag~   99 (272)
                      ++|.+.|.
T Consensus       266 ~vid~~G~  273 (378)
T PLN02827        266 YSFECVGD  273 (378)
T ss_pred             EEEECCCC
Confidence            99999883

>PRK06487 glycerate dehydrogenase; Provisional

Probab=95.08  E-value=0.39  Score=42.06  Aligned_cols=37  Identities=27%  Similarity=0.418  Sum_probs=33.6

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecC
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQ   48 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~   48 (272)
                      .++.||++.|.|- |.||+++++.+..-|.+|+..+|.
T Consensus       144 ~~l~gktvgIiG~-G~IG~~vA~~l~~fgm~V~~~~~~  180 (317)
T PRK06487        144 VELEGKTLGLLGH-GELGGAVARLAEAFGMRVLIGQLP  180 (317)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCC
Confidence            5799999999995 999999999999999999988775

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=95.07  E-value=0.19  Score=44.93  Aligned_cols=79  Identities=16%  Similarity=0.314  Sum_probs=51.9

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHHHHHHHhCCceEEEEecCCCH-HHHHHHHHHHHHHhCCcc
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGEDLADKLGQDVCYIHCDISNE-DEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g~id   91 (272)
                      .|.+++|.| .+++|.+++..+...|+ +|+.+++++++.+.+ ++++..   ...+..+. ++....+.++..  +.+|
T Consensus       190 ~g~~VlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a-~~lGa~---~~i~~~~~~~~~~~~v~~~~~--~~~d  262 (373)
T cd08299         190 PGSTCAVFG-LGGVGLSAIMGCKAAGASRIIAVDINKDKFAKA-KELGAT---ECINPQDYKKPIQEVLTEMTD--GGVD  262 (373)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHcCCc---eEecccccchhHHHHHHHHhC--CCCe
Confidence            468999996 59999999999989998 799998887776655 556542   11222221 122222222222  3699


Q ss_pred             EEEeCCCC
Q 024145           92 IMYNNAGI   99 (272)
Q Consensus        92 ~lv~~ag~   99 (272)
                      .++.+.|.
T Consensus       263 ~vld~~g~  270 (373)
T cd08299         263 FSFEVIGR  270 (373)
T ss_pred             EEEECCCC
Confidence            99998873

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=95.06  E-value=0.064  Score=42.90  Aligned_cols=41  Identities=20%  Similarity=0.272  Sum_probs=33.3

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHH
Q 024145           17 VAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADK   58 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~   58 (272)
                      +|.|.|+ |-+|+.++..++..|++|.+.+++++..+...+.
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~   41 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKR   41 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHH
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhH
Confidence            4678887 9999999999999999999999998876655443

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>PRK05479 ketol-acid reductoisomerase; Provisional

Probab=95.02  E-value=0.31  Score=42.83  Aligned_cols=91  Identities=14%  Similarity=0.105  Sum_probs=54.6

Q ss_pred             ccCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCC----------ceEEEEecCCCHHHHH
Q 024145            8 APFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQ----------DVCYIHCDISNEDEVI   77 (272)
Q Consensus         8 ~~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~----------~~~~~~~D~~~~~~~~   77 (272)
                      .....+++|++.|.| .|.+|.++++.|.+.|++|++..|+.....+..++.+.          ...++.+=+- ++...
T Consensus        10 ~~~~~L~gktIgIIG-~GsmG~AlA~~L~~sG~~Vvv~~r~~~~s~~~A~~~G~~~~s~~eaa~~ADVVvLaVP-d~~~~   87 (330)
T PRK05479         10 ADLSLIKGKKVAIIG-YGSQGHAHALNLRDSGVDVVVGLREGSKSWKKAEADGFEVLTVAEAAKWADVIMILLP-DEVQA   87 (330)
T ss_pred             CChhhhCCCEEEEEe-eHHHHHHHHHHHHHCCCEEEEEECCchhhHHHHHHCCCeeCCHHHHHhcCCEEEEcCC-HHHHH
Confidence            345668999999998 56899999999999999998877764443333332221          1112222222 22335


Q ss_pred             HHH-HHHHHHhCCccEEEeCCCCC
Q 024145           78 NLV-DTAVSKFGKLDIMYNNAGIL  100 (272)
Q Consensus        78 ~~~-~~~~~~~g~id~lv~~ag~~  100 (272)
                      .++ +++.....+=.+|++++|+.
T Consensus        88 ~V~~~~I~~~Lk~g~iL~~a~G~~  111 (330)
T PRK05479         88 EVYEEEIEPNLKEGAALAFAHGFN  111 (330)
T ss_pred             HHHHHHHHhcCCCCCEEEECCCCC
Confidence            555 45554433224667788754

>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family

Probab=95.02  E-value=1  Score=36.96  Aligned_cols=74  Identities=14%  Similarity=0.236  Sum_probs=52.2

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh----------------CCceEEEEecCCCHHHHH
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL----------------GQDVCYIHCDISNEDEVI   77 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----------------~~~~~~~~~D~~~~~~~~   77 (272)
                      .+.++|+.|+..|  + =+..|+++|++|+.++.++...+.+.++.                +.++.++.+|+.+.+.  
T Consensus        34 ~~~rvLd~GCG~G--~-da~~LA~~G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~--  108 (213)
T TIGR03840        34 AGARVFVPLCGKS--L-DLAWLAEQGHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTA--  108 (213)
T ss_pred             CCCeEEEeCCCch--h-HHHHHHhCCCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCc--
Confidence            5679999998766  3 37788999999999999988777654322                2357788888877542  


Q ss_pred             HHHHHHHHHhCCccEEEeCCCC
Q 024145           78 NLVDTAVSKFGKLDIMYNNAGI   99 (272)
Q Consensus        78 ~~~~~~~~~~g~id~lv~~ag~   99 (272)
                             +..+.+|.++-.+..
T Consensus       109 -------~~~~~fD~i~D~~~~  123 (213)
T TIGR03840       109 -------ADLGPVDAVYDRAAL  123 (213)
T ss_pred             -------ccCCCcCEEEechhh
Confidence                   012357887776543

Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.93  E-value=0.084  Score=45.22  Aligned_cols=37  Identities=24%  Similarity=0.425  Sum_probs=33.5

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeec
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADV   47 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r   47 (272)
                      -++.||.++|.|.|.-+|+.++..|.++|++|.++..
T Consensus       153 i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs  189 (285)
T PRK14191        153 IEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHI  189 (285)
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeC
Confidence            4689999999999999999999999999999987643

>PLN02514 cinnamyl-alcohol dehydrogenase

Probab=94.88  E-value=0.19  Score=44.60  Aligned_cols=74  Identities=26%  Similarity=0.346  Sum_probs=50.9

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      .|.+++|.| +|++|...++.+...|++|+++.+++++.+...+.++....   .|-.+.+.+.       +..+.+|++
T Consensus       180 ~g~~vlV~G-~G~vG~~av~~Ak~~G~~vi~~~~~~~~~~~~~~~~Ga~~~---i~~~~~~~~~-------~~~~~~D~v  248 (357)
T PLN02514        180 SGLRGGILG-LGGVGHMGVKIAKAMGHHVTVISSSDKKREEALEHLGADDY---LVSSDAAEMQ-------EAADSLDYI  248 (357)
T ss_pred             CCCeEEEEc-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhcCCcEE---ecCCChHHHH-------HhcCCCcEE
Confidence            678999996 59999999888888899998888877666666666664321   2223332222       222368999


Q ss_pred             EeCCC
Q 024145           94 YNNAG   98 (272)
Q Consensus        94 v~~ag   98 (272)
                      |.+.|
T Consensus       249 id~~g  253 (357)
T PLN02514        249 IDTVP  253 (357)
T ss_pred             EECCC
Confidence            99887

>PRK06436 glycerate dehydrogenase; Provisional

Probab=94.86  E-value=0.24  Score=43.06  Aligned_cols=40  Identities=28%  Similarity=0.208  Sum_probs=34.7

Q ss_pred             cCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCc
Q 024145            9 PFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQD   49 (272)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~   49 (272)
                      +...+.||++.|.| .|.||+++++.+...|++|+..+|+.
T Consensus       116 ~~~~L~gktvgIiG-~G~IG~~vA~~l~afG~~V~~~~r~~  155 (303)
T PRK06436        116 PTKLLYNKSLGILG-YGGIGRRVALLAKAFGMNIYAYTRSY  155 (303)
T ss_pred             CCCCCCCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEECCCC
Confidence            34679999999999 58999999998888899999998863

>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family

Probab=94.84  E-value=0.24  Score=43.52  Aligned_cols=78  Identities=24%  Similarity=0.359  Sum_probs=51.3

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      ++++++|+| .+++|.++++.+...|.+|+.+.++.+..+.+ ++.+..   ...|..++.+....+.....  +.+|++
T Consensus       165 ~~~~vlV~g-~g~vg~~~~~~a~~~G~~vi~~~~~~~~~~~~-~~~g~~---~~i~~~~~~~~~~~~~~~~~--~~~d~v  237 (345)
T cd08260         165 PGEWVAVHG-CGGVGLSAVMIASALGARVIAVDIDDDKLELA-RELGAV---ATVNASEVEDVAAAVRDLTG--GGAHVS  237 (345)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH-HHhCCC---EEEccccchhHHHHHHHHhC--CCCCEE
Confidence            578999999 69999999998888999999998887766555 445431   12233331222222222221  269999


Q ss_pred             EeCCC
Q 024145           94 YNNAG   98 (272)
Q Consensus        94 v~~ag   98 (272)
                      +.+.|
T Consensus       238 i~~~g  242 (345)
T cd08260         238 VDALG  242 (345)
T ss_pred             EEcCC
Confidence            98875

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty

>cd05195 enoyl_red enoyl reductase of polyketide synthase

Probab=94.82  E-value=0.22  Score=41.81  Aligned_cols=81  Identities=21%  Similarity=0.245  Sum_probs=51.0

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      .|.+++|.|+++++|..+++.....|++|+.+.++.+..+.+. ..+. ......|-.+.+..+++.. ... ...+|.+
T Consensus       108 ~g~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~-~~~-~~~~d~v  183 (293)
T cd05195         108 KGESVLIHAAAGGVGQAAIQLAQHLGAEVFATVGSEEKREFLR-ELGG-PVDHIFSSRDLSFADGILR-ATG-GRGVDVV  183 (293)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HhCC-CcceEeecCchhHHHHHHH-HhC-CCCceEE
Confidence            5789999999999999998888888999999888766555443 3332 1112223333332222222 111 1258999


Q ss_pred             EeCCC
Q 024145           94 YNNAG   98 (272)
Q Consensus        94 v~~ag   98 (272)
                      +.+.|
T Consensus       184 i~~~~  188 (293)
T cd05195         184 LNSLS  188 (293)
T ss_pred             EeCCC
Confidence            98776

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	272
2bgk_A	278	X-Ray Structure Of Apo-Secoisolariciresinol Dehydro		2e-59
1nff_A	260	Crystal Structure Of Rv2002 Gene Product From Mycob		6e-28
2uvd_A	246	The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier		4e-27
1nfr_A	260	Rv2002 Gene Product From Mycobacterium Tuberculosis		4e-26
4fn4_A	254	Short-chain Nad(h)-dependent Dehydrogenase/reductas		3e-25
1hdc_A	254	Mechanism Of Inhibition Of 3alpha,20beta-Hydroxyste		5e-25
1rwb_A	261	Cooperative Effect Of Two Surface Amino Acid Mutati		2e-24
4dqx_A	277	Crystal Structure Of A Short Chain Dehydrogenase Fr		2e-24
3tox_A	280	Crystal Structure Of A Short Chain Dehydrogenase In		3e-24
1g6k_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant E		5e-24
2dtd_A	264	Structure Of Thermoplasma Acidophilum Aldohexose De		5e-24
1gee_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant Q		5e-24
1gco_A	261	Crystal Structure Of Glucose Dehydrogenase Complexe		7e-24
1uls_A	245	Crystal Structure Of Tt0140 From Thermus Thermophil		9e-24
3r1i_A	276	Crystal Structure Of A Short-Chain Type Dehydrogena		9e-24
2hsd_A	253	The Refined Three-Dimensional Structure Of 3alpha,2		1e-23
2zk7_A	257	Structure Of A C-Terminal Deletion Mutant Of Thermo		2e-23
1vl8_A	267	Crystal Structure Of Gluconate 5-dehydrogenase (tm0		2e-23
3gvc_A	277	Crystal Structure Of Probable Short-Chain Dehydroge		1e-22
2a4k_A	263	3-Oxoacyl-[acyl Carrier Protein] Reductase From The		5e-22
2hq1_A	247	Crystal Structure Of Orf 1438 A Putative GlucoseRIB		9e-22
1zem_A	262	Crystal Structure Of Nad+-Bound Xylitol Dehydrogena		1e-21
4dml_A	269	3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Syn		1e-21
2ag5_A	246	Crystal Structure Of Human Dhrs6 Length = 246		2e-21
2cfc_A	250	Structural Basis For Stereo Selectivity In The (R)-		5e-21
3vtz_A	269	Structure Of Thermoplasma Volcanium Aldohexose Dehy		6e-21
3sj7_A	252	Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) F		9e-21
3oec_A	317	Crystal Structure Of Carveol Dehydrogenase From Myc		1e-20
1ahi_A	255	7 Alpha-Hydroxysteroid Dehydrogenase Complexed With		1e-20
3awd_A	260	Crystal Structure Of Gox2181 Length = 260		3e-20
3ay7_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		3e-20
3aus_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		3e-20
3ay6_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		3e-20
2d1y_A	256	Crystal Structure Of Tt0321 From Thermus Thermophil		3e-20
1hxh_A	253	Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID D		4e-20
3tzh_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		5e-20
4ibo_A	271	Crystal Structure Of A Putative Gluconate Dehydroge		1e-19
3rsh_A	251	Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reduc		1e-19
1wmb_A	260	Crystal Structure Of Nad Dependent D-3-Hydroxybutyl		2e-19
3t7c_A	299	Crystal Structure Of Carveol Dehydrogenase From Myc		2e-19
3tzc_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		4e-19
3uwr_A	286	Crystal Structure Of Carveol Dehydrogenase From Myc		4e-19
2ztu_A	260	T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase C		5e-19
2ztm_A	260	T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase L		5e-19
1iy8_A	267	Crystal Structure Of Levodione Reductase Length = 2		6e-19
3tzk_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		7e-19
3enn_A	249	2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		1e-18
3u09_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-18
3emk_A	246	2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		1e-18
1edo_A	244	The X-Ray Structure Of Beta-Keto Acyl Carrier Prote		1e-18
3osu_A	246	Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Pro		2e-18
3f9i_A	249	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-18
1zjy_A	251	Structure Of R-Specific Alcohol Dehydrogenase (Muta		2e-18
1i01_A	244	Crystal Structure Of Beta-Ketoacyl [acyl Carrier Pr		2e-18
1q7c_A	244	The Structure Of Betaketoacyl-[acp] Reductase Y151f		7e-18
3gaf_A	256	2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid De		7e-18
1x1e_A	239	Crystal Structure Of Tt0495 Protein From Thermus Th		8e-18
2pnf_A	248	Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-		8e-18
3grp_A	266	2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-		8e-18
3pgx_A	280	Crystal Structure Of A Putative Carveol Dehydrogena		9e-18
2et6_A	604	(3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candid		1e-17
4iin_A	271	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		1e-17
1nxq_A	251	Crystal Structure Of R-Alcohol Dehydrogenase (Radh)		2e-17
3is3_A	270	Crystal Structure Of 17beta-Hydroxysteroid Dehydrog		2e-17
3n74_A	261	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-17
3itd_A	270	Crystal Structure Of An Inactive 17beta-Hydroxyster		2e-17
3uve_A	286	Crystal Structure Of Carveol Dehydrogenase ((+)-Tra		2e-17
3tzq_B	271	Crystal Structure Of A Short-Chain Type Dehydrogena		3e-17
1yde_A	270	Crystal Structure Of Human Retinal Short-Chain Dehy		4e-17
3v2h_A	281	The Crystal Structure Of D-Beta-Hydroxybutyrate Deh		5e-17
3s55_A	281	Crystal Structure Of A Putative Short-Chain Dehydro		5e-17
1geg_A	256	Cryatal Structure Analysis Of Meso-2,3-Butanediol D		7e-17
3o4r_A	261	Crystal Structure Of Human DehydrogenaseREDUCTASE (		7e-17
1ja9_A	274	Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalen		1e-16
2cf2_E	226	Architecture Of Mammalian Fatty Acid Synthase Lengt		1e-16
2wdz_A	254	Crystal Structure Of The Short Chain Dehydrogenase		3e-16
2ph3_A	245	Crystal Structure Of 3-oxoacyl-[acyl Carrier Protei		3e-16
3op4_A	248	Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carr		3e-16
3sx2_A	278	Crystal Structure Of A Putative 3-Ketoacyl-(Acyl-Ca		4e-16
3qiv_A	253	Crystal Structure Of A Putative Short-Chain Dehydro		4e-16
2ew8_A	249	Crystal Structure Of The (s)-specific 1-phenylethan		5e-16
2yz7_A	260	X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase F		6e-16
1k2w_A	256	Crystal Structure Of Sorbitol Dehydrogenase From R.		6e-16
2zat_A	260	Crystal Structure Of A Mammalian Reductase Length =		1e-15
2nm0_A	253	Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl		2e-15
3nug_A	247	Crystal Structure Of Wild Type Tetrameric Pyridoxal		2e-15
4egf_A	266	Crystal Structure Of A L-Xylulose Reductase From My		2e-15
2c07_A	285	Oxoacyl-Acp Reductase Of Plasmodium Falciparum Leng		2e-15
1e3s_A	261	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		3e-15
1e3w_A	261	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		3e-15
1e6w_A	260	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		3e-15
3ak4_A	263	Crystal Structure Of Nadh-Dependent Quinuclidinone		6e-15
1doh_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		7e-15
1ybv_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		7e-15
2pd6_A	264	Structure Of Human Hydroxysteroid Dehydrogenase Typ		8e-15
4g81_D	255	Crystal Structure Of A Hexonate Dehydrogenase Ortho		9e-15
3o38_A	266	Crystal Structure Of A Short Chain Dehydrogenase Fr		9e-15
1uzl_A	247	Maba From Mycobacterium Tuberculosis Length = 247		1e-14
1xhl_A	297	Crystal Structure Of Putative Tropinone Reductase-I		1e-14
1pr9_A	244	Human L-Xylulose Reductase Holoenzyme Length = 244		1e-14
3ndr_A	247	Crystal Structure Of Tetrameric Pyridoxal 4-Dehydro		1e-14
3ai1_A	263	The Crystal Structure Of L-Sorbose Reductase From G		2e-14
2ntn_A	267	Crystal Structure Of Maba-c60v/g139a/s144l Length =		2e-14
4eso_A	255	Crystal Structure Of A Putative Oxidoreductase Prot		3e-14
3vc7_A	254	Crystal Structure Of A Putative Oxidoreductase From		3e-14
3tsc_A	277	Crystal Structure Of Short Chain Dehydrogenase Map_		3e-14
3imf_A	257	1.99 Angstrom Resolution Crystal Structure Of A Sho		4e-14
3tjr_A	301	Crystal Structure Of A Rv0851c Ortholog Short Chain		4e-14
4hp8_A	247	Crystal Structure Of A Putative 2-Deoxy-D-Gluconate		5e-14
1uzm_A	247	Maba From Mycobacterium Tuberculosis Length = 247		5e-14
3ai3_A	263	The Crystal Structure Of L-Sorbose Reductase From G		6e-14
3ftp_A	270	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		6e-14
1zbq_A	327	Crystal Structure Of Human 17-beta-hydroxysteroid D		7e-14
3a28_C	258	Crystal Structure Of L-2,3-Butanediol Dehydrogenase		8e-14
1spx_A	278	Crystal Structure Of Glucose Dehydrogenase Of Caeno		9e-14
1u7t_A	261	Crystal Structure Of AbadHSD10 WITH A BOUND INHIBIT		1e-13
3qlj_A	322	Crystal Structure Of A Short Chain Dehydrogenase Fr		1e-13
1so8_A	261	Abeta-bound Human Abad Structure [also Known As 3-h		1e-13
3rih_A	293	Crystal Structure Of A Putative Short Chain Dehydro		1e-13
2o23_A	265	The Structure Of Wild-Type Human Hadh2 (17beta-Hydr		1e-13
3gdf_A	267	Crystal Structure Of The Nadp-Dependent Mannitol De		2e-13
3svt_A	281	Structure Of A Short-Chain Type DehydrogenaseREDUCT		2e-13
3ppi_A	281	Crystal Structure Of 3-Hydroxyacyl-Coa Dehydrogenas		2e-13
3un1_A	260	Crystal Structure Of An Oxidoreductase From Sinorhi		2e-13
3d3w_A	244	Structure Of L-Xylulose Reductase With Bound Coenzy		2e-13
3d3w_B	245	Structure Of L-Xylulose Reductase With Bound Coenzy		3e-13
1cyd_A	244	Carbonyl Reductase Complexed With Nadph And 2-Propa		3e-13
1bdb_A	277	Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From		4e-13
3gk3_A	269	Crystal Structure Of Acetoacetyl-Coa Reductase From		4e-13
3cxr_A	291	Crystal Structure Of Gluconate 5-Dehydrogase From S		4e-13
4iqg_C	271	Crystal Structure Of Bpro0239 Oxidoreductase From P		5e-13
2fwm_X	250	Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodih		6e-13
3ksu_A	262	Crystal Structure Of Short-Chain Dehydrogenase From		1e-12
3ctm_A	279	Crystal Structure Of A Carbonyl Reductase From Cand		1e-12
3ucx_A	264	The Structure Of A Short Chain Dehydrogenase From M		2e-12
4e6p_A	259	Crystal Structure Of A Probable Sorbitol Dehydrogen		2e-12
3uxy_A	266	The Crystal Structure Of Short Chain Dehydrogenase		2e-12
4b79_A	242	The Aeropath Project And Pseudomonas Aeruginosa Hig		2e-12
2y93_A	281	Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2		2e-12
4e3z_A	272	Crystal Structure Of A Oxidoreductase From Rhizobiu		2e-12
3uf0_A	273	Crystal Structure Of A Putative Nad(P) Dependent Gl		2e-12
1gz6_A	319	(3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat		3e-12
1yxm_A	303	Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa		3e-12
3v8b_A	283	Crystal Structure Of A 3-Ketoacyl-Acp Reductase Fro		3e-12
3oml_A	613	Structure Of Full-Length Peroxisomal Multifunctiona		3e-12
3pk0_A	262	Crystal Structure Of Short-Chain DehydrogenaseREDUC		5e-12
3u5t_A	267	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		7e-12
3rkr_A	262	Crystal Structure Of A Metagenomic Short-Chain Oxid		7e-12
2q2q_A	255	Structure Of D-3-Hydroxybutyrate Dehydrogenase From		7e-12
1w6u_A	302	Structure Of Human Decr Ternary Complex Length = 30		8e-12
4gkb_A	258	Crystal Structure Of A Short Chain Dehydrogenase Ho		8e-12
4fgs_A	273	Crystal Structure Of A Probable Dehydrogenase Prote		1e-11
3ezl_A	256	Crystal Structure Of Acetyacetyl-Coa Reductase From		2e-11
1h5q_A	265	Mannitol Dehydrogenase From Agaricus Bisporus Lengt		2e-11
3edm_A	259	Crystal Structure Of A Short Chain Dehydrogenase Fr		2e-11
2ae2_A	260	Tropinone Reductase-Ii Complexed With Nadp+ And Pse		2e-11
1ipe_A	259	Tropinone Reductase-Ii Complexed With Nadph Length		3e-11
3tpc_A	257	Crystal Structure Of A Hypothtical Protein Sma1452		3e-11
4e4y_A	244	The Crystal Structure Of A Short Chain Dehydrogenas		3e-11
3lyl_A	247	Structure Of 3-Oxoacyl-Acylcarrier Protein Reductas		5e-11
2c7v_A	268	Structure Of Trypanosoma Brucei Pteridine Reductase		5e-11
2qio_A	256	X-Ray Structure Of Enoyl-Acyl Carrier Protein Reduc		5e-11
3ojf_A	257	Crystal Structure Of The Bacillus Cereus Enoyl-Acyl		5e-11
3jq7_A	288	Crystal Structure Of Pteridine Reductase 1 (Ptr1) F		6e-11
3bmc_A	288	Structure Of Pteridine Reductase 1 (Ptr1) From Tryp		6e-11
2bd0_A	244	Chlorobium Tepidum Sepiapterin Reductase Complexed		6e-11
3ijr_A	291	2.05 Angstrom Resolution Crystal Structure Of A Sho		7e-11
2wd7_A	268	Pteridine Reductase 1 (Ptr1) From Trypanosoma Bruce		8e-11
3jq7_B	288	Crystal Structure Of Pteridine Reductase 1 (Ptr1) F		8e-11
3bmc_B	288	Structure Of Pteridine Reductase 1 (Ptr1) From Tryp		8e-11
2wd7_B	268	Pteridine Reductase 1 (Ptr1) From Trypanosoma Bruce		9e-11
1xkq_A	280	Crystal Structure Of Short-Chain DehydrogenaseREDUC		1e-10
3v2g_A	271	Crystal Structure Of A DehydrogenaseREDUCTASE FROM		1e-10
3i3o_A	291	2.06 Angstrom Resolution Crystal Structure Of A Sho		1e-10
3i4f_A	264	Structure Of Putative 3-oxoacyl-reductase From Baci		2e-10
1ae1_A	273	Tropinone Reductase-I Complex With Nadp Length = 27		2e-10
1xq1_A	266	X-Ray Structure Of Putative Tropinone Reducatse Fro		3e-10
1w73_A	302	Binary Structure Of Human Decr Solved By Semet Sad.		3e-10
3kvo_A	346	Crystal Structure Of The Catalytic Domain Of Human		4e-10
2b4q_A	276	Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex		5e-10
2gdz_A	267	Crystal Structure Of 15-Hydroxyprostaglandin Dehydr		6e-10
2jap_A	247	Clavulanic Acid Dehydrogenase: Structural And Bioch		7e-10
3sju_A	279	Hedamycin Polyketide Ketoreductase Bound To Nadph L		8e-10
4fc6_A	277	Studies On Dcr Shed New Light On Peroxisomal Beta-O		8e-10
4iiu_A	267	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		9e-10
3tl3_A	257	Structure Of A Short-Chain Type DehydrogenaseREDUCT		2e-09
4afn_A	269	Crystal Structure Of 3-ketoacyl-(acyl-carrier-prote		2e-09
3u0b_A	454	Crystal Structure Of An Oxidoreductase From Mycobac		2e-09
3icc_A	255	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Car		3e-09
3r3s_A	294	Structure Of The Ygha Oxidoreductase From Salmonell		3e-09
1o5i_A	249	Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei		3e-09
2jah_A	247	Biochemical And Structural Analysis Of The Clavulan		3e-09
2ehd_A	234	Crystal Structure Analysis Of Oxidoreductase Length		4e-09
1yb1_A	272	Crystal Structure Of Human 17-Beta-Hydroxysteroid D		5e-09
3csd_B	281	Actinorhodin Polyketide Ketoreductase Mutant P94l B		6e-09
2rhr_B	277	P94l Actinorhodin Ketordeuctase Mutant, With Nadph		6e-09
3oic_A	258	Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl		7e-09
4dc0_A	281	Crystal Structure Of F189w Actinorhodin Polyketide		9e-09
3m1l_A	432	Crystal Strucutre Of A C-Terminal Trunacted Mutant		1e-08
3v1t_C	462	Crystal Structure Of A Putative Ketoacyl Reductase		1e-08
4dc1_A	281	Crystal Structure Of Y202f Actinorhodin Polyketide		1e-08
4fw8_A	454	Crystal Structure Of Fabg4 Complexed With Coenzyme		1e-08
3lls_A	475	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-08
3q6i_A	446	Crystal Structure Of Fabg4 And Coenzyme Binary Comp		2e-08
3pjf_A	270	Structure Of Enr G93v Mutant-Nad+-Triclosan Complex		2e-08
3ged_A	247	Fingerprint And Structural Analysis Of A Apo Scor E		2e-08
4dyv_A	272	Crystal Structure Of A Short-Chain DehydrogenaseRED		2e-08
1w4z_A	281	Structure Of Actinorhodin Polyketide (Actiii) Reduc		2e-08
1x7g_A	261	Actinorhodin Polyketide Ketoreductase, Act Kr, With		2e-08
2rh4_A	277	Actinorhodin Ketoreductase, Actkr, With Nadph And I		2e-08
4dbz_A	281	Crystal Structure Of V151l Actinorhodin Polyketide		2e-08
3ioy_A	319	Structure Of Putative Short-Chain Dehydrogenase (Sa		2e-08
4ali_A	282	Crystal Structure Of S. Aureus Fabi In Complex With		3e-08
2yw9_A	261	Crystal Structure Of Tt0143 From Thermus Thermophil		3e-08
3gnt_A	256	Crystal Structure Of The Staphylococcus Aureus Enoy		3e-08
4all_A	277	Crystal Structure Of S. Aureus Fabi In Complex With		3e-08
3pjd_A	270	Structure Of Enr G93a Mutant-Nad+-Triclosan Complex		3e-08
4fs3_A	256	Crystal Structure Of Staphylococcus Aureus Enoyl-Ac		3e-08
3gns_A	260	Crystal Structure Of The Staphylococcus Aureus Enoy		4e-08
2qq5_A	260	Crystal Structure Of Human Sdr Family Member 1 Leng		4e-08
3pje_A	270	Structure Of Enr G93s Mutant-Nad+-Triclosan Complex		4e-08
3pxx_A	287	Crystal Structure Of Carveol Dehydrogenase From Myc		5e-08
4dry_A	281	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		5e-08
4eit_A	276	Crystal Structure Of An Enoyl-(Acyl Carrier Protein		6e-08
1ulu_A	261	Crystal Structure Of Tt0143 From Thermus Thermophil		6e-08
1uay_A	242	Crystal Structure Of Type Ii 3-Hydroxyacyl-Coa Dehy		7e-08
1dfg_A	261	X-Ray Structure Of Escherichia Coli Enoyl Reductase		8e-08
1c14_A	262	Crystal Structure Of E Coli Enoyl Reductase-nad+-tr		8e-08
3g1t_A	258	Crystal Structure Of Short Chain Dehydrogenase From		8e-08
1qsg_A	265	Crystal Structure Of Enoyl Reductase Inhibition By		8e-08
3e03_A	274	Crystal Structure Of A Putative Dehydrogenase From		9e-08
3grk_A	293	Crystal Structure Of Short Chain Dehydrogenase Redu		1e-07
3h7a_A	252	Crystal Structure Of Short-Chain Dehydrogenase From		1e-07
1p33_A	289	Pteridine Reductase From Leishmania Tarentolae Comp		1e-07
1xg5_A	279	Structure Of Human Putative Dehydrogenase Mgc4172 I		2e-07
4ixt_A	254	Structure Of A 37-fold Mutant Of Halohydrin Dehalog		2e-07
3m1a_A	281	The Crystal Structure Of A Short-Chain Dehydrogenas		3e-07
1mxf_A	276	Crystal Structure Of Inhibitor Complex Of Putative		3e-07
1mxh_A	276	Crystal Structure Of Substrate Complex Of Putative		4e-07
2p91_A	285	Crystal Structure Of Enoyl-[acyl-Carrier-Protein] R		5e-07
3oif_A	266	Crystal Structure Of Enoyl-Acp Reductases I (Fabi)		8e-07
3k2e_A	296	Crystal Structure Of Enoyl-(Acyl-Carrier-Protein) R		1e-06
3t4x_A	267	Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDU		3e-06
1fjh_A	257	The Crystal Structure Of 3-Alpha-Hydroxysteroid Deh		3e-06
2ntv_A	268	Mycobacterium Leprae Inha Bound With Pth-Nad Adduct		3e-06
3uce_A	223	Crystal Structure Of A Small-Chain Dehydrogenase In		4e-06
2z1n_A	260	Crystal Structure Of Ape0912 From Aeropyrum Pernix		4e-06
3tfo_A	264	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Car		4e-06
1pwx_A	254	Crystal Structure Of The Haloalcohol Dehalogenase H		4e-06
2aqi_A	269	Crystal Structure Of Isoniazid-Resistant I47t Enoyl		6e-06
3i1j_A	247	Structure Of A Putative Short Chain Dehydrogenase F		6e-06
3oey_A	269	Crystal Structure Of Inha_t266e:nadh Complex Length		1e-05
4dqu_A	269	Mycobacterium Tuberculosis Inha-D148g Mutant In Com		1e-05
2aqh_A	269	Crystal Structure Of Isoniazid-Resistant I21v Enoyl		1e-05
4da9_A	280	Crystal Structure Of Putative Short-Chain Dehydroge		1e-05
1p44_A	269	Targeting Tuberculosis And Malaria Through Inhibiti		1e-05
1bvr_A	268	M.Tb. Enoyl-Acp Reductase (Inha) In Complex With Na		1e-05
3of2_A	269	Crystal Structure Of Inha_t266d:nadh Complex Length		1e-05
2h9i_A	268	Mycobacterium Tuberculosis Inha Bound With Eth-Nad		1e-05
2ie0_A	268	Crystal Structure Of Isoniazid-Resistant I21v Enoyl		1e-05
3iah_A	256	Crystal Structure Of Short Chain Dehydrogenase (yci		1e-05
3nyw_A	250	Crystal Structure Of A Betaketoacyl-[acp] Reductase		2e-05
3f5q_A	262	Crystal Structure Of Putative Short Chain Dehydroge		2e-05
2nv6_A	268	Mycobacterium Tuberculosis Inha (S94a) Bound With I		2e-05
2ieb_A	268	Crystal Structure Of Isoniazid-Resistant S94a Enoyl		2e-05
2aqk_A	269	Crystal Structure Of Isoniazid-Resistant S94a Enoyl		2e-05
2xox_A	288	Crystal Structure Of Pteridine Reductase (Ptr1) Fro		2e-05
2pd3_A	275	Crystal Structure Of The Helicobacter Pylori Enoyl-		3e-05
3f5s_A	255	Crystal Structure Of Putatitve Short Chain Dehydrog		3e-05
1w0c_A	307	Inhibition Of Leishmania Major Pteridine Reductase		3e-05
1e92_A	288	Pteridine Reductase 1 From Leishmania Major Complex		4e-05
2qhx_A	328	Structure Of Pteridine Reductase From Leishmania Ma		4e-05
1e7w_A	291	One Active Site, Two Modes Of Reduction Correlate T		4e-05
3f1l_A	252	The 0.95 A Structure Of An Oxidoreductase, Ycik Fro		6e-05
3asu_A	248	Crystal Structure Of Serine Dehydrogenase From Esch		4e-04
3f1k_A	252	Crystal Structure Of Ycik From E. Coli, An Oxidored		5e-04
2dkn_A	255	Crystal Structure Of The 3-alpha-hydroxysteroid Deh		6e-04
3p19_A	266	Improved Nadph-Dependent Blue Fluorescent Protein L		9e-04

>pdb|2BGK|A Chain A, X-Ray Structure Of Apo-Secoisolariciresinol Dehydrogenase Length = 278

Iteration: 1
 Score =  225 bits (574), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 117/255 (45%), Positives = 163/255 (63%), Gaps = 4/255 (1%)
Query: 12  RLEGKVXXXXXXXXXXXXXXVELFHENGAKVVIADVQDKLGEDLADKLGQD--VCYIHCD 69
           RL+ KV               +LF   GAKVVIAD+ D  G+ + + +G    + ++HCD
Sbjct: 13  RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCD 72
Query: 70  ISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLG 129
           ++ +++V NLVDT ++K GKLDIM+ N G+L  +  SIL+    D +R++++N  G FL 
Sbjct: 73  VTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLV 132
Query: 130 AKHAARVMVPQQKGCILFTASACTEIAGLG-SPAYTISKYGILGLVKCLAAELGQYGIRV 188
           AKHAARVM+P +KG I+FTAS  +  AG G S  YT +K+ +LGL   L  ELG+YGIRV
Sbjct: 133 AKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIRV 192
Query: 189 NCVSPYGLATGMSMK-GGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVS 247
           NCVSPY +A+ +     GVD + +E    Q  NLKG  L+ + +A+A  YLA DES YVS
Sbjct: 193 NCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDESKYVS 252
Query: 248 GQNLVVDGGFSVVNP 262
           G NLV+DGG++  NP
Sbjct: 253 GLNLVIDGGYTRTNP 267

>pdb|1NFF|A Chain A, Crystal Structure Of Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score =  120 bits (302), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 83/245 (33%), Positives = 124/245 (50%), Gaps = 11/245 (4%)
Query: 12  RLEGKVXXXXXXXXXXXXXXVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDIS 71
           RL GKV              V      GAKVV  D+ D+ G+ +A +L     Y+H D++
Sbjct: 4   RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVT 63
Query: 72  NEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAK 131
              +    VDTAV+ FG L ++ NNAGIL+   G+I D   ++ +R+++VN  G FLG +
Sbjct: 64  QPAQWKAAVDTAVTAFGGLHVLVNNAGILN--IGTIEDYALTEWQRILDVNLTGVFLGIR 121
Query: 132 HAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCV 191
              + M    +G I+  +S       +    YT +K+ + GL K  A ELG  GIRVN +
Sbjct: 122 AVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSI 181
Query: 192 SPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNL 251
            P  + T   M   V   + ++++       G   +   ++N  +YLASDESSY +G   
Sbjct: 182 HPGLVKT--PMTDWVPEDIFQTAL-------GRAAEPVEVSNLVVYLASDESSYSTGAEF 232
Query: 252 VVDGG 256
           VVDGG
Sbjct: 233 VVDGG 237

>pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis (Ba3989) Length = 246

Iteration: 1
 Score =  118 bits (295), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 78/227 (34%), Positives = 118/227 (51%), Gaps = 14/227 (6%)
Query: 37  ENGAKVVI--ADVQDKLGE--DLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDI 92
           + GA VV+  A  + K  E  D   KLG D   +  D++N ++V N+V   V  FG++DI
Sbjct: 26  KQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQVDI 85
Query: 93  MYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASAC 152
           + NNAG+   +   ++   + + + +IN N  G FL  K  +R M+ Q+ G I+  AS  
Sbjct: 86  LVNNAGVTKDNL--LMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVV 143
Query: 153 TEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIE 212
                 G   Y  +K G++GL K  A EL    I VN ++P  +AT M+        L E
Sbjct: 144 GVTGNPGQANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMT------DVLDE 197
Query: 213 SSMSQMGNL--KGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGF 257
           +  ++M  L    +F +   IANA  + ASD+S Y++GQ L VDGG 
Sbjct: 198 NIKAEMLKLIPAAQFGEAQDIANAVTFFASDQSKYITGQTLNVDGGM 244

>pdb|1NFR|A Chain A, Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score =  114 bits (286), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 83/245 (33%), Positives = 122/245 (49%), Gaps = 11/245 (4%)
Query: 12  RLEGKVXXXXXXXXXXXXXXVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDIS 71
           RL GKV              V      GAKVV  D+ D+ G+  A +L     Y+H D++
Sbjct: 4   RLTGKVALVSGGARGXGASHVRAXVAEGAKVVFGDILDEEGKAXAAELADAARYVHLDVT 63
Query: 72  NEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAK 131
              +    VDTAV+ FG L ++ NNAGIL+   G+I D   ++ +R+++VN  G FLG +
Sbjct: 64  QPAQWKAAVDTAVTAFGGLHVLVNNAGILN--IGTIEDYALTEWQRILDVNLTGVFLGIR 121
Query: 132 HAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCV 191
              +      +G I+  +S       +    YT +K+ + GL K  A ELG  GIRVN +
Sbjct: 122 AVVKPXKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSI 181
Query: 192 SPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNL 251
            P GL         V   + ++++       G   +   ++N  +YLASDESSY +G   
Sbjct: 182 HP-GLVK-TPXTDWVPEDIFQTAL-------GRAAEPVEVSNLVVYLASDESSYSTGAEF 232
Query: 252 VVDGG 256
           VVDGG
Sbjct: 233 VVDGG 237

>pdb|4FN4|A Chain A, Short-chain Nad(h)-dependent Dehydrogenase/reductase From Sulfolobus Acidocaldarius Length = 254

Iteration: 1
 Score =  112 bits (279), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 119/221 (53%), Gaps = 3/221 (1%)
Query: 42  VVIADVQDKLGEDLAD--KLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGI 99
           V +  ++D+L + + +   +G++V  +  D+S + +V   V      + ++D++ NNAGI
Sbjct: 35  VAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSRIDVLCNNAGI 94
Query: 100 LDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLG 159
           +D     + +      ER++ VN    F  ++    +M+ Q KG I+ TAS      G  
Sbjct: 95  MD-GVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFA 153
Query: 160 SPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMG 219
              YT++K+G++GL + +AA  G  GIR   V P  + T + +       L   +++++ 
Sbjct: 154 GAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLM 213
Query: 220 NLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVV 260
           +L     + + IAN  ++LASDE+S+V+G  +VVDGG +V+
Sbjct: 214 SLSSRLAEPEDIANVIVFLASDEASFVNGDAVVVDGGLTVL 254

>pdb|1HDC|A Chain A, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid Dehydrogenase By A Licorice-Derived Steroidal Inhibitor Length = 254

Iteration: 1
 Score =  111 bits (277), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 82/228 (35%), Positives = 118/228 (51%), Gaps = 14/228 (6%)
Query: 41  KVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGIL 100
           +VV+ADV D+ G   A +LG    Y H D++ E++   +V  A  +FG +D + NNAGI 
Sbjct: 31  RVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGI- 89
Query: 101 DRSFGSILDTPKSD-LERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLG 159
             S G  L+T   +   +++ +N  G F+G K     M     G I+  +SA   +    
Sbjct: 90  --STGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLAL 147
Query: 160 SPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPA---LIESSMS 216
           + +Y  SK+G+ GL K  A ELG   IRVN V P    T M+ + G+         + M 
Sbjct: 148 TSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGNYPNTPMG 207
Query: 217 QMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVVNPTV 264
           ++GN  GE      IA A + L SD SSYV+G  L VDGG++   PTV
Sbjct: 208 RVGNEPGE------IAGAVVKLLSDTSSYVTGAELAVDGGWT-TGPTV 248

>pdb|1RWB|A Chain A, Cooperative Effect Of Two Surface Amino Acid Mutations (Q252l And E170k) Of Glucose Dehydrogenase From Bacillus Megaterium Iwg3 For The Stabilization Of Oligomeric State Length = 261

Iteration: 1
 Score =  109 bits (272), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/259 (33%), Positives = 132/259 (50%), Gaps = 17/259 (6%)
Query: 10  FKRLEGKVXXXXXXXXXXXXXXVELFHENGAKVVI-----ADVQDKLGEDLADKLGQDVC 64
           +K LEGKV                 F    AKVV+      D  + + E++  K+G +  
Sbjct: 2   YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEI-KKVGGEAI 60
Query: 65  YIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTI 124
            +  D++ E +VINLV +A+ +FGKLD+M NNAG+ +    S  +   SD  ++I+ N  
Sbjct: 61  AVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPV--SSHEMSLSDWNKVIDTNLT 118
Query: 125 GGFLGAKHAARVMVPQQ-KGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQ 183
           G FLG++ A +  V    KG ++  +S   +I       Y  SK G+  + K LA E   
Sbjct: 119 GAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTKTLALEYAP 178
Query: 184 YGIRVNCVSPYGLATGMSMKGGVDP---ALIESSMSQMGNLKGEFLKTDGIANAALYLAS 240
            GIRVN + P  + T ++ +   DP   A +E SM  MG + GE    + IA  A +LAS
Sbjct: 179 KGIRVNNIGPGAINTPINAEKFADPEQRADVE-SMIPMGYI-GE---PEEIAAVAAWLAS 233
Query: 241 DESSYVSGQNLVVDGGFSV 259
            E+SYV+G  L  DGG ++
Sbjct: 234 SEASYVTGITLFADGGMTL 252

>pdb|4DQX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Rhizobium Etli Cfn 42 Length = 277

Iteration: 1
 Score =  109 bits (272), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/235 (31%), Positives = 119/235 (50%), Gaps = 6/235 (2%)
Query: 33  ELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDI 92
           ELF +NGA VV+ADV +     +A+++G     +  D+S+  +  + V+   +K+G++D+
Sbjct: 45  ELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESXVEKTTAKWGRVDV 104
Query: 93  MYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASAC 152
           + NNAG    + G+++  P+   +R+ +VN  G FL +K+   V      G I+ T S  
Sbjct: 105 LVNNAGF--GTTGNVVTIPEETWDRIXSVNVKGIFLCSKYVIPVXRRNGGGSIINTTSYT 162
Query: 153 TEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMK---GGVDPA 209
              A     AY  SK  I  L +  A +  + GIRVN V+P  + +    K      DPA
Sbjct: 163 ATSAIADRTAYVASKGAISSLTRAXAXDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPA 222
Query: 210 LIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVVNPTV 264
            + S  +    +       + IA A L+LASD S + +G  L VDGG S+ N  V
Sbjct: 223 KLRSDFNARA-VXDRXGTAEEIAEAXLFLASDRSRFATGSILTVDGGSSIGNHLV 276

>pdb|3TOX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase In Complex With Nad(P) From Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score =  108 bits (270), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 116/256 (45%), Gaps = 9/256 (3%)
Query: 12  RLEGKVXXXXXXXXXXXXXXVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHC--- 68
           RLEGK+                LF   GAKVV+         +L D++            
Sbjct: 5   RLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAG 64
Query: 69  DISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFL 128
           D+ +E     LV+ AV +FG LD  +NNAG L  + G I           ++ N    FL
Sbjct: 65  DVGDEALHEALVELAVRRFGGLDTAFNNAGALG-AMGEISSLSVEGWRETLDTNLTSAFL 123
Query: 129 GAKHAARVMVPQQKGCILFTASACTEIAGL-GSPAYTISKYGILGLVKCLAAELGQYGIR 187
            AK+    +     G + FT+S     AG  G   Y  SK G++GLV+ LA ELG  GIR
Sbjct: 124 AAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVELGARGIR 183
Query: 188 VNCVSPYGLATGMSMKG--GVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSY 245
           VN + P G  T  +     G  P      +  +  LK    + + IA AALYLASD +S+
Sbjct: 184 VNALLPGGTDTPANFANLPGAAPE-TRGFVEGLHALK-RIARPEEIAEAALYLASDGASF 241
Query: 246 VSGQNLVVDGGFSVVN 261
           V+G  L+ DGG SV  
Sbjct: 242 VTGAALLADGGASVTK 257

>pdb|1G6K|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant E96a Complexed With Nad+ Length = 261

Iteration: 1
 Score =  107 bits (268), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 87/258 (33%), Positives = 131/258 (50%), Gaps = 17/258 (6%)
Query: 10  FKRLEGKVXXXXXXXXXXXXXXVELFHENGAKVVI-----ADVQDKLGEDLADKLGQDVC 64
           +K LEGKV                 F    AKVV+      D  + + E++  K+G +  
Sbjct: 2   YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEI-KKVGGEAI 60
Query: 65  YIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTI 124
            +  D++ E +VINLV +A+ +FGKLD+M NNAG+ +    S  +   SD  ++I+ N  
Sbjct: 61  AVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLANPV--SSHEMSLSDWNKVIDTNLT 118
Query: 125 GGFLGAKHAARVMVPQQ-KGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQ 183
           G FLG++ A +  V    KG ++  +S   +I       Y  SK G+  + + LA E   
Sbjct: 119 GAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAP 178
Query: 184 YGIRVNCVSPYGLATGMSMKGGVDP---ALIESSMSQMGNLKGEFLKTDGIANAALYLAS 240
            GIRVN + P  + T ++ +   DP   A +E SM  MG + GE    + IA  A +LAS
Sbjct: 179 KGIRVNNIGPGAINTPINAEKFADPEQRADVE-SMIPMGYI-GE---PEEIAAVAAWLAS 233
Query: 241 DESSYVSGQNLVVDGGFS 258
            E+SYV+G  L  DGG +
Sbjct: 234 SEASYVTGITLFADGGMT 251

>pdb|2DTD|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (aldt) In Ligand-free Form Length = 264

Iteration: 1
 Score =  107 bits (268), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 77/260 (29%), Positives = 121/260 (46%), Gaps = 18/260 (6%)
Query: 10  FKRLEGKVXXXXXXXXXXXXXXVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCD 69
           F  L  KV               E F + G+KV+   + D  GE   D       +I CD
Sbjct: 3   FSDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDP-GEAKYD-------HIECD 54
Query: 70  ISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLG 129
           ++N D+V   +D    ++G + ++ NNAGI   S+G I      +  R+I+VN  G +  
Sbjct: 55  VTNPDQVKASIDHIFKEYGSISVLVNNAGI--ESYGKIESMSMGEWRRIIDVNLFGYYYA 112
Query: 130 AKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVN 189
           +K A   M+  +   I+  +S    I    + AY  SK+ ++GL K +A +     +R N
Sbjct: 113 SKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAPL-LRCN 171
Query: 190 CVSPYGLATGMSMKG-----GVDPALIESSMSQMGNLK--GEFLKTDGIANAALYLASDE 242
            V P  + T +  K      G DP  IE  +S+ G+        K   +A+A  +LAS E
Sbjct: 172 AVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASAVAFLASRE 231
Query: 243 SSYVSGQNLVVDGGFSVVNP 262
           +S+++G  L VDGG S+  P
Sbjct: 232 ASFITGTCLYVDGGLSIRAP 251

>pdb|1GEE|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l Complexed With Nad+ Length = 261

Iteration: 1
 Score =  107 bits (268), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 87/259 (33%), Positives = 132/259 (50%), Gaps = 17/259 (6%)
Query: 10  FKRLEGKVXXXXXXXXXXXXXXVELFHENGAKVVI-----ADVQDKLGEDLADKLGQDVC 64
           +K LEGKV                 F    AKVV+      D  + + E++  K+G +  
Sbjct: 2   YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEI-KKVGGEAI 60
Query: 65  YIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTI 124
            +  D++ E +VINLV +A+ +FGKLD+M NNAG+ +    S  +   SD  ++I+ N  
Sbjct: 61  AVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPV--SSHEMSLSDWNKVIDTNLT 118
Query: 125 GGFLGAKHAARVMVPQQ-KGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQ 183
           G FLG++ A +  V    KG ++  +S   +I       Y  SK G+  + + LA E   
Sbjct: 119 GAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAP 178
Query: 184 YGIRVNCVSPYGLATGMSMKGGVDP---ALIESSMSQMGNLKGEFLKTDGIANAALYLAS 240
            GIRVN + P  + T ++ +   DP   A +E SM  MG + GE    + IA  A +LAS
Sbjct: 179 KGIRVNNIGPGAINTPINAEKFADPEQRADVE-SMIPMGYI-GE---PEEIAAVAAWLAS 233
Query: 241 DESSYVSGQNLVVDGGFSV 259
            E+SYV+G  L  DGG ++
Sbjct: 234 SEASYVTGITLFADGGMTL 252

>pdb|1GCO|A Chain A, Crystal Structure Of Glucose Dehydrogenase Complexed With Nad+ Length = 261

Iteration: 1
 Score =  107 bits (267), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 87/258 (33%), Positives = 131/258 (50%), Gaps = 17/258 (6%)
Query: 10  FKRLEGKVXXXXXXXXXXXXXXVELFHENGAKVVI-----ADVQDKLGEDLADKLGQDVC 64
           +K LEGKV                 F    AKVV+      D  + + E++  K+G +  
Sbjct: 2   YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEI-KKVGGEAI 60
Query: 65  YIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTI 124
            +  D++ E +VINLV +A+ +FGKLD+M NNAG+ +    S  +   SD  ++I+ N  
Sbjct: 61  AVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPV--SSHEMSLSDWNKVIDTNLT 118
Query: 125 GGFLGAKHAARVMVPQQ-KGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQ 183
           G FLG++ A +  V    KG ++  +S   +I       Y  SK G+  + + LA E   
Sbjct: 119 GAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAP 178
Query: 184 YGIRVNCVSPYGLATGMSMKGGVDP---ALIESSMSQMGNLKGEFLKTDGIANAALYLAS 240
            GIRVN + P  + T ++ +   DP   A +E SM  MG + GE    + IA  A +LAS
Sbjct: 179 KGIRVNNIGPGAINTPINAEKFADPEQRADVE-SMIPMGYI-GE---PEEIAAVAAWLAS 233
Query: 241 DESSYVSGQNLVVDGGFS 258
            E+SYV+G  L  DGG +
Sbjct: 234 SEASYVTGITLFADGGMT 251

>pdb|1ULS|A Chain A, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8 Length = 245

Iteration: 1
 Score =  107 bits (266), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 76/228 (33%), Positives = 122/228 (53%), Gaps = 9/228 (3%)
Query: 32  VELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLD 91
           +ELF + GA++V  D+++    + A+ +G     +  D+++   V      A++  G+LD
Sbjct: 22  LELFAKEGARLVACDIEEGPLREAAEAVGAHP--VVXDVADPASVERGFAEALAHLGRLD 79
Query: 92  IMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASA 151
            + + AGI   +F      P  D E ++ VN  G FL AK A+     +  G I+ TAS 
Sbjct: 80  GVVHYAGITRDNFH--WKXPLEDWELVLRVNLTGSFLVAKAASEAXREKNPGSIVLTASR 137
Query: 152 CTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALI 211
              +  LG   Y  S  G++GL + LA ELG++GIRVN ++P  + T  + K  V   + 
Sbjct: 138 VY-LGNLGQANYAASXAGVVGLTRTLALELGRWGIRVNTLAPGFIETRXTAK--VPEKVR 194
Query: 212 ESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSV 259
           E +++      G   K   +A AAL+L SDESS+++GQ L VDGG ++
Sbjct: 195 EKAIA--ATPLGRAGKPLEVAYAALFLLSDESSFITGQVLFVDGGRTI 240

>pdb|3R1I|A Chain A, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 276

Iteration: 1
 Score =  107 bits (266), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 75/230 (32%), Positives = 119/230 (51%), Gaps = 13/230 (5%)
Query: 35  FHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKFGKLD 91
           + E GA+V +A       + +AD++   G     I CD++  D+V  ++D    + G +D
Sbjct: 52  YAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGGID 111
Query: 92  IMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQ-QKGCILFTAS 150
           I   NAGI+  S  ++LD P  + +R+ + N  G FL A+ AAR MV Q   G I+ TAS
Sbjct: 112 IAVCNAGIV--SVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTAS 169
Query: 151 ACTEIAGLGSPA--YTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDP 208
               I  +      Y  SK  ++ L K +A EL  + IRVN VSP  + T +     V+P
Sbjct: 170 MSGHIINIPQQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTEL-----VEP 224
Query: 209 ALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFS 258
                ++ +     G   + + +    LYLAS  SSY++G ++V+DGG++
Sbjct: 225 LADYHALWEPKIPLGRMGRPEELTGLYLYLASAASSYMTGSDIVIDGGYT 274

>pdb|2HSD|A Chain A, The Refined Three-Dimensional Structure Of 3alpha,20beta- Hydroxysteroid Dehydrogenase And Possible Roles Of The Residues Conserved In Short-Chain Dehydrogenases Length = 253

Iteration: 1
 Score =  106 bits (265), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 81/227 (35%), Positives = 116/227 (51%), Gaps = 13/227 (5%)
Query: 41  KVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGIL 100
           +VV+ADV D+ G   A +LG    Y H D++ E++   +V  A  +FG +D + NNAGI 
Sbjct: 31  RVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGI- 89
Query: 101 DRSFGSILDTPKSD-LERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLG 159
             S G  L+T   +   +++ +N  G F+G K     M     G I+  +SA   +    
Sbjct: 90  --STGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLAL 147
Query: 160 SPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMG 219
           + +Y  SK+G+ GL K  A ELG   IRVN V P    T M+ + G+         + MG
Sbjct: 148 TSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGNYPNTPMG 207
Query: 220 NL--KGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVVNPTV 264
            +   GE      IA A + L SD SSYV+G  L VDGG++   PTV
Sbjct: 208 RVGEPGE------IAGAVVKLLSDTSSYVTGAELAVDGGWT-TGPTV 247

>pdb|2ZK7|A Chain A, Structure Of A C-Terminal Deletion Mutant Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (Aldt) Length = 257

Iteration: 1
 Score =  106 bits (264), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 120/257 (46%), Gaps = 18/257 (7%)
Query: 10  FKRLEGKVXXXXXXXXXXXXXXVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCD 69
           F  L  KV               E F + G+KV+   + D  GE   D       +I CD
Sbjct: 10  FSDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDP-GEAKYD-------HIECD 61
Query: 70  ISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLG 129
           ++N D+V   +D    ++G + ++ NNAGI   S+G I      +  R+I+VN  G +  
Sbjct: 62  VTNPDQVKASIDHIFKEYGSISVLVNNAGI--ESYGKIESMSMGEWRRIIDVNLFGYYYA 119
Query: 130 AKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVN 189
           +K A   M+  +   I+  +S    I    + AY  SK+ ++GL K +A +     +R N
Sbjct: 120 SKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAPL-LRCN 178
Query: 190 CVSPYGLATGMSMKG-----GVDPALIESSMSQMGNLK--GEFLKTDGIANAALYLASDE 242
            V P  + T +  K      G DP  IE  +S+ G+        K   +A+A  +LAS E
Sbjct: 179 AVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASAVAFLASRE 238
Query: 243 SSYVSGQNLVVDGGFSV 259
           +S+++G  L VDGG S+
Sbjct: 239 ASFITGTCLYVDGGLSI 255

>pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441) From Thermotoga Maritima At 2.07 A Resolution Length = 267

Iteration: 1
 Score =  106 bits (264), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 71/227 (31%), Positives = 113/227 (49%), Gaps = 9/227 (3%)
Query: 37  ENGAKVVIA----DVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDI 92
           E G  VV+A    +   +  + L +K G +     CD+SN +EV  L++    KFGKLD 
Sbjct: 43  EAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGKLDT 102
Query: 93  MYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASAC 152
           + N AGI  R      + P  +  ++I VN  G +   + A  ++       I+   S  
Sbjct: 103 VVNAAGINRRHPAE--EFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLT 160
Query: 153 TEIAGLGS-PAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALI 211
            E   + +  AY  SK G+  L K LA E G+YGIRVN ++P    T M+     DP  +
Sbjct: 161 VEEVTMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKL 220
Query: 212 ESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFS 258
           +  + ++    G     + +   A++LAS+E+ YV+GQ + VDGG++
Sbjct: 221 DYMLKRIP--LGRTGVPEDLKGVAVFLASEEAKYVTGQIIFVDGGWT 265

>pdb|3GVC|A Chain A, Crystal Structure Of Probable Short-Chain Dehydrogenase- Reductase From Mycobacterium Tuberculosis Length = 277

Iteration: 1
 Score =  103 bits (256), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 67/202 (33%), Positives = 108/202 (53%), Gaps = 5/202 (2%)
Query: 58  KLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLER 117
           K+G        D+S+E ++I +VD  V+ FG +D +  NAG++     S++DT   D +R
Sbjct: 72  KIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDKLVANAGVVH--LASLIDTTVEDFDR 129
Query: 118 LINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCL 177
           +I +N  G +L  KHAA  M+ +  G I+  +S   ++A  G+ AY +SK GI+ L +  
Sbjct: 130 VIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRIT 189
Query: 178 AAELGQYGIRVNCVSPYGLATGMSMKGGV--DPAL-IESSMSQMGNLKGEFLKTDGIANA 234
           AAEL   GIR N + P  + T M        D AL    + S +  L+G     + +A  
Sbjct: 190 AAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAGI 249
Query: 235 ALYLASDESSYVSGQNLVVDGG 256
            ++L SD++S ++G   + DGG
Sbjct: 250 VVFLLSDDASMITGTTQIADGG 271

>pdb|2A4K|A Chain A, 3-Oxoacyl-[acyl Carrier Protein] Reductase From Thermus Thermophilus Tt0137 Length = 263

Iteration: 1
 Score =  101 bits (251), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 77/254 (30%), Positives = 127/254 (50%), Gaps = 19/254 (7%)
Query: 12  RLEGKVXXXXXXXXXXXXXXVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDIS 71
           RL GK               ++LF   GA +V  D +++L  +    L  +   +  D+S
Sbjct: 3   RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVS 62
Query: 72  NEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAK 131
           +   V  +   A+ +FG+L  + + AG+   +     + P    E+++ VN  G FL A+
Sbjct: 63  DPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALS--WNLPLEAWEKVLRVNLTGSFLVAR 120
Query: 132 HAARVMVPQQKGCILFTASACTEIAGLGS---PAYTISKYGILGLVKCLAAELGQYGIRV 188
            A  V+  ++ G ++ T S    +AGLG+     Y   K G++GL + LA EL + G+RV
Sbjct: 121 KAGEVL--EEGGSLVLTGS----VAGLGAFGLAHYAAGKLGVVGLARTLALELARKGVRV 174
Query: 189 NCVSPYGLATGMSMKGGVDPALIESSM--SQMGNLKGEFLKTDGIANAALYLASDESSYV 246
           N + P  + T   M  G+ P   E  +  S +G       + + +A AAL+L S+ES+Y+
Sbjct: 175 NVLLPGLIQT--PMTAGLPPWAWEQEVGASPLGRAG----RPEEVAQAALFLLSEESAYI 228
Query: 247 SGQNLVVDGGFSVV 260
           +GQ L VDGG S+V
Sbjct: 229 TGQALYVDGGRSIV 242

>pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL Dehydrogenase From Clostridium Thermocellum Length = 247

Iteration: 1
 Score =  100 bits (249), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 103/198 (52%), Gaps = 6/198 (3%)
Query: 60  GQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLI 119
           G +V     D+ N ++V N+V TA+  FG++DI+ NNAGI   +   +L   + D + ++
Sbjct: 54  GINVVVAKGDVKNPEDVENMVKTAMDAFGRIDILVNNAGITRDTL--MLKMSEKDWDDVL 111
Query: 120 NVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAA 179
           N N    +L  K  +++M+ Q+ G I+   S    I   G   Y  SK G++G  K +A 
Sbjct: 112 NTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAASKAGLIGFTKSIAK 171
Query: 180 ELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLA 239
           E    GI  N V+P  + T M+    V P  ++        LK  F   + +AN   +LA
Sbjct: 172 EFAAKGIYCNAVAPGIIKTDMT---DVLPDKVKEMYLNNIPLK-RFGTPEEVANVVGFLA 227
Query: 240 SDESSYVSGQNLVVDGGF 257
           SD+S+Y++GQ + +DGG 
Sbjct: 228 SDDSNYITGQVINIDGGL 245

>pdb|1ZEM|A Chain A, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase Length = 262

Iteration: 1
 Score =  100 bits (248), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 102/206 (49%), Gaps = 23/206 (11%)
Query: 68  CDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGF 127
           CD+++E+ VI  VD+ V  FGK+D ++NNAG    +F  + D P  D  R++ +N  G F
Sbjct: 63  CDVTSEEAVIGTVDSVVRDFGKIDFLFNNAG-YQGAFAPVQDYPSDDFARVLTINVTGAF 121
Query: 128 LGAKHAARVMVPQQKGCILFTASACTEIAGLGSP----AYTISKYGILGLVKCLAAELGQ 183
              K  +R M+ Q  G I+ TAS    +AG+  P    AY  SK  I+ L +  A +L  
Sbjct: 122 HVLKAVSRQMITQNYGRIVNTAS----MAGVKGPPNMAAYGTSKGAIIALTETAALDLAP 177
Query: 184 YGIRVNCVSPYGLATGMSMKGGV-------------DPALIESSMSQMGNLKGEFLKTDG 230
           Y IRVN +SP  +  G   +  V             DP ++   M     ++  +   + 
Sbjct: 178 YNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMR-RYGDINE 236
Query: 231 IANAALYLASDESSYVSGQNLVVDGG 256
           I     +L  D+SS+++G NL + GG
Sbjct: 237 IPGVVAFLLGDDSSFMTGVNLPIAGG 262

>pdb|4DML|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Synechococcus Elongatus Pcc 7942 Length = 269

Iteration: 1
 Score =  100 bits (248), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 61/192 (31%), Positives = 107/192 (55%), Gaps = 10/192 (5%)
Query: 67  HCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGG 126
             D+S E EV  L    + ++G+LD++ NNAGI   +   +L   + D + ++++N  G 
Sbjct: 84  KADVSQESEVEALFAAVIERWGRLDVLVNNAGITRDTL--LLRMKRDDWQSVLDLNLGGV 141
Query: 127 FLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGI 186
           FL ++ AA++M+ Q+ G I+  AS   E+   G   Y+ +K G++GL K +A EL   GI
Sbjct: 142 FLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYSAAKAGVIGLTKTVAKELASRGI 201
Query: 187 RVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASD-ESSY 245
            VN V+P  +AT M+ +      L    + ++  L G + +   +A    +LA+D  ++Y
Sbjct: 202 TVNAVAPGFIATDMTSE------LAAEKLLEVIPL-GRYGEAAEVAGVVRFLAADPAAAY 254
Query: 246 VSGQNLVVDGGF 257
           ++GQ + +DGG 
Sbjct: 255 ITGQVINIDGGL 266

>pdb|2AG5|A Chain A, Crystal Structure Of Human Dhrs6 Length = 246

Iteration: 1
 Score = 99.8 bits (247), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 125/261 (47%), Gaps = 31/261 (11%)
Query: 12  RLEGKVXXXXXXXXXXXXXXVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDIS 71
           RL+GKV                 F   GAKV+  D+ +   ++L    G     +  D++
Sbjct: 3   RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVL--DVT 60
Query: 72  NEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAK 131
            + ++    D   ++  +LD+++N AG +    G++LD  + D +  +N+N    +L  K
Sbjct: 61  KKKQI----DQFANEVERLDVLFNVAGFVHH--GTVLDCEEKDWDFSMNLNVRSMYLMIK 114
Query: 132 HAARVMVPQQKGCILFTASACTEIAGL-GSPAYTISKYGILGLVKCLAAELGQYGIRVNC 190
                M+ Q+ G I+  +S  + + G+     Y+ +K  ++GL K +AA+  Q GIR NC
Sbjct: 115 AFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNC 174
Query: 191 VSPYGLATGMSMKGGVDPALIESSMSQMGN--------LK----GEFLKTDGIANAALYL 238
           V P          G VD   ++  +   GN        LK    G F   + IA   +YL
Sbjct: 175 VCP----------GTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYL 224
Query: 239 ASDESSYVSGQNLVVDGGFSV 259
           ASDES+YV+G  +++DGG+S+
Sbjct: 225 ASDESAYVTGNPVIIDGGWSL 245

>pdb|2CFC|A Chain A, Structural Basis For Stereo Selectivity In The (R)- And (S)- Hydroxypropylethane Thiosulfonate Dehydrogenases Length = 250

Iteration: 1
 Score = 97.8 bits (242), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 116/231 (50%), Gaps = 7/231 (3%)
Query: 35  FHENGAKVVIADVQDKLGEDLA----DKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKL 90
           F   G +V   D+  +  E+ A          V  +  D+++E +V   +   + +FG +
Sbjct: 22  FLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAI 81
Query: 91  DIMYNNAGILDRSFGSILDT-PKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTA 149
           D++ NNAGI   S   +L T P    ++++ VN  G FLG +     M+ Q  G I+  A
Sbjct: 82  DVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIA 141
Query: 150 SACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPA 209
           S  + +A  G  AYT SK  +L L K +A +    GIR N V P  + T M+      P 
Sbjct: 142 SVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQPE 201
Query: 210 LIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVV 260
           L +  ++++   + E      +A+A ++LA ++++YV+G  LV+DG ++ +
Sbjct: 202 LRDQVLARIP--QKEIGTAAQVADAVMFLAGEDATYVNGAALVMDGAYTAI 250

>pdb|3VTZ|A Chain A, Structure Of Thermoplasma Volcanium Aldohexose Dehydrogenase Length = 269

Iteration: 1
 Score = 97.8 bits (242), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 73/226 (32%), Positives = 114/226 (50%), Gaps = 17/226 (7%)
Query: 39  GAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAG 98
           GAKVV   + +K   +++D       +   D++NE+EV   V+    K+G++DI+ NNAG
Sbjct: 38  GAKVVSVSLDEKSDVNVSD-------HFKIDVTNEEEVKEAVEKTTKKYGRIDILVNNAG 90
Query: 99  ILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGL 158
           I    +  +  TP     R+I+VN  G +L AK+   VM+    G I+  AS  +  A  
Sbjct: 91  I--EQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATK 148
Query: 159 GSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKG-----GVDPALIES 213
            + AY  SK+ +LGL + +A +     IR N V P  + T M +K      G D   +E 
Sbjct: 149 NAAAYVTSKHALLGLTRSVAIDYAP-KIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVER 207
Query: 214 SMSQMGNLK--GEFLKTDGIANAALYLASDESSYVSGQNLVVDGGF 257
            + + G     G   + + +A    +LASD SS+++G  L VDGG 
Sbjct: 208 KIEEWGRQHPMGRIGRPEEVAEVVAFLASDRSSFITGACLTVDGGL 253

>pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From Staphylococcus Aureus Complex With Nadph Length = 252

Iteration: 1
 Score = 97.1 bits (240), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 103/198 (52%), Gaps = 6/198 (3%)
Query: 60  GQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLI 119
           G D   I  ++++ DEV  ++   VS+FG LD++ NNAGI   +   ++   + + + +I
Sbjct: 59  GVDSFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNL--LMRMKEQEWDDVI 116
Query: 120 NVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAA 179
           + N  G F   + A   M+ Q+ G I+  +S    +   G   Y  +K G++GL K  A 
Sbjct: 117 DTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAAR 176
Query: 180 ELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLA 239
           EL   GI VN V+P  + + M+    +   L E  ++Q+      F +   IAN   +LA
Sbjct: 177 ELASRGITVNAVAPGFIVSDMT--DALSDELKEQMLTQIP--LARFGQDTDIANTVAFLA 232
Query: 240 SDESSYVSGQNLVVDGGF 257
           SD++ Y++GQ + V+GG 
Sbjct: 233 SDKAKYITGQTIHVNGGM 250

>pdb|3OEC|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Thermoresistibile Length = 317

Iteration: 1
 Score = 97.1 bits (240), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/280 (26%), Positives = 132/280 (47%), Gaps = 37/280 (13%)
Query: 8   APFKRLEGKVXXXXXXXXXXXXXXVELFHENGAKVVIADV-------------QDKLGED 54
           A   RL+GKV                   ++GA +V  D+              ++L E 
Sbjct: 39  ARMNRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKET 98
Query: 55  --LADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPK 112
             L ++ G+ +     D+ +   +  +VD A+++FG +DI+ +N GI ++  G ++    
Sbjct: 99  VRLVEEQGRRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQ--GEVVSLTD 156
Query: 113 SDLERLINVNTIGGFLGAKHAARVMVPQ-----QKGCILFTASACTEIAGLGSPAYTISK 167
                ++  N IG +    HA R ++P      Q G ++F +S        G   Y  SK
Sbjct: 157 QQWSDILQTNLIGAW----HACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQSHYAASK 212
Query: 168 YGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGV---------DPALIESS--MS 216
           +G+ GL+  LA E+G++ IRVN V+P  + T M++   +         +P   +++   S
Sbjct: 213 HGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFS 272
Query: 217 QMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGG 256
           Q+  L   +++ + ++NA  +LASDE+ Y+ G  + VDGG
Sbjct: 273 QLTLLPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGG 312

>pdb|1AHI|A Chain A, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh And 7-Oxo Glycochenodeoxycholic Acid Length = 255

Iteration: 1
 Score = 96.7 bits (239), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 81/252 (32%), Positives = 119/252 (47%), Gaps = 17/252 (6%)
Query: 12  RLEGKVXXXXXXXXXXXXXXVELFHENGAKVVIADVQDKLGEDLAD---KLGQDVCYIHC 68
           RL+GK                  F   GA VV++D+       + D   +LG       C
Sbjct: 8   RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRC 67
Query: 69  DISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFL 128
           DI++E E+  L D A+SK GK+DI+ NNAG          D P +D  R   +N    F 
Sbjct: 68  DITSEQELSALADFAISKLGKVDILVNNAG---GGGPKPFDMPMADFRRAYELNVFSFF- 123
Query: 129 GAKHAARVMVPQQK----GCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQY 184
              H ++++ P+ +    G IL   S   E   +   +Y  SK     LV+ +A +LG+ 
Sbjct: 124 ---HLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEK 180
Query: 185 GIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESS 244
            IRVN ++P  + T  ++K  + P  IE  M Q   ++    +   IANAAL+L S  +S
Sbjct: 181 NIRVNGIAPGAILTD-ALKSVITPE-IEQKMLQHTPIR-RLGQPQDIANAALFLCSPAAS 237
Query: 245 YVSGQNLVVDGG 256
           +VSGQ L V GG
Sbjct: 238 WVSGQILTVSGG 249

>pdb|3AWD|A Chain A, Crystal Structure Of Gox2181 Length = 260

Iteration: 1
 Score = 95.5 bits (236), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 71/253 (28%), Positives = 120/253 (47%), Gaps = 8/253 (3%)
Query: 12  RLEGKVXXXXXXXXXXXXXXVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHC 68
           RL+ +V              V    E GA+V+IAD+ + +     + L   G DV  +  
Sbjct: 10  RLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVM 69
Query: 69  DISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFL 128
           D++N + V N V +   + G++DI+   AGI      +  D       + +++N  G F 
Sbjct: 70  DVTNTESVQNAVRSVHEQEGRVDILVACAGICISEVKA-EDMTDGQWLKQVDINLNGMFR 128
Query: 129 GAKHAARVMVPQQKGCILFTASACTEIAGL--GSPAYTISKYGILGLVKCLAAELGQYGI 186
             +   R+M+ Q++G I+   S    I        AY  SK G+   ++ LAAE   +GI
Sbjct: 129 SCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYIRSLAAEWAPHGI 188
Query: 187 RVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYV 246
           R N V+P  + T ++  G   P L ++ ++  G   G   + D +A+   +LASD +S +
Sbjct: 189 RANAVAPTYIETTLTRFGMEKPELYDAWIA--GTPMGRVGQPDEVASVVQFLASDAASLM 246
Query: 247 SGQNLVVDGGFSV 259
           +G  + VD GF+V
Sbjct: 247 TGAIVNVDAGFTV 259

>pdb|3AY7|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 G259a Mutant Length = 269

Iteration: 1
 Score = 95.5 bits (236), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 107/206 (51%), Gaps = 11/206 (5%)
Query: 57  DKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLE 116
           ++ G     +  D++ E++V+NLV TA+ +FG LD+M NNAG+ +      L     +  
Sbjct: 61  EEAGGQAIIVQGDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPVPSHELSL--DNWN 118
Query: 117 RLINVNTIGGFLGAKHAARVMVPQQ-KGCILFTASACTEIAGLGSPAYTISKYGILGLVK 175
           ++I+ N  G FLG++ A +  V    KG ++  +S    I       Y  SK G+  + +
Sbjct: 119 KVIDTNLTGAFLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTE 178
Query: 176 CLAAELGQYGIRVNCVSPYGLATGMSMKGGVDP---ALIESSMSQMGNLKGEFLKTDGIA 232
            LA E    GIRVN + P  + T ++ +   DP   A +E SM  MG +     K + +A
Sbjct: 179 TLALEYAPKGIRVNNIGPGAMNTPINAEKFADPVQRADVE-SMIPMGYIG----KPEEVA 233
Query: 233 NAALYLASDESSYVSGQNLVVDGGFS 258
             A +LAS ++SYV+G  L  DGG +
Sbjct: 234 AVAAFLASSQASYVTGITLFADGGMT 259

>pdb|3AUS|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 In Ligand-Free Form Length = 269

Iteration: 1
 Score = 95.5 bits (236), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 107/206 (51%), Gaps = 11/206 (5%)
Query: 57  DKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLE 116
           ++ G     +  D++ E++V+NLV TA+ +FG LD+M NNAG+ +      L     +  
Sbjct: 61  EEAGGQAIIVQGDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPVPSHELSL--DNWN 118
Query: 117 RLINVNTIGGFLGAKHAARVMVPQQ-KGCILFTASACTEIAGLGSPAYTISKYGILGLVK 175
           ++I+ N  G FLG++ A +  V    KG ++  +S    I       Y  SK G+  + +
Sbjct: 119 KVIDTNLTGAFLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTE 178
Query: 176 CLAAELGQYGIRVNCVSPYGLATGMSMKGGVDP---ALIESSMSQMGNLKGEFLKTDGIA 232
            LA E    GIRVN + P  + T ++ +   DP   A +E SM  MG +     K + +A
Sbjct: 179 TLALEYAPKGIRVNNIGPGAMNTPINAEKFADPVQRADVE-SMIPMGYIG----KPEEVA 233
Query: 233 NAALYLASDESSYVSGQNLVVDGGFS 258
             A +LAS ++SYV+G  L  DGG +
Sbjct: 234 AVAAFLASSQASYVTGITLFADGGMT 259

>pdb|3AY6|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 A258f Mutant In Complex With Nadh And D-Glucose Length = 269

Iteration: 1
 Score = 95.5 bits (236), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 107/206 (51%), Gaps = 11/206 (5%)
Query: 57  DKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLE 116
           ++ G     +  D++ E++V+NLV TA+ +FG LD+M NNAG+ +      L     +  
Sbjct: 61  EEAGGQAIIVQGDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPVPSHELSL--DNWN 118
Query: 117 RLINVNTIGGFLGAKHAARVMVPQQ-KGCILFTASACTEIAGLGSPAYTISKYGILGLVK 175
           ++I+ N  G FLG++ A +  V    KG ++  +S    I       Y  SK G+  + +
Sbjct: 119 KVIDTNLTGAFLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTE 178
Query: 176 CLAAELGQYGIRVNCVSPYGLATGMSMKGGVDP---ALIESSMSQMGNLKGEFLKTDGIA 232
            LA E    GIRVN + P  + T ++ +   DP   A +E SM  MG +     K + +A
Sbjct: 179 TLALEYAPKGIRVNNIGPGAMNTPINAEKFADPVQRADVE-SMIPMGYIG----KPEEVA 233
Query: 233 NAALYLASDESSYVSGQNLVVDGGFS 258
             A +LAS ++SYV+G  L  DGG +
Sbjct: 234 AVAAFLASSQASYVTGITLFADGGMT 259

>pdb|2D1Y|A Chain A, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8 Length = 256

Iteration: 1
 Score = 95.5 bits (236), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 113/227 (49%), Gaps = 9/227 (3%)
Query: 35  FHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMY 94
           F   GA V + D++ + G+++A+ +G    +   D+ +E E +  V+ A    G++D++ 
Sbjct: 26  FAREGALVALCDLRPE-GKEVAEAIGG--AFFQVDLEDERERVRFVEEAAYALGRVDVLV 82
Query: 95  NNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTE 154
           NNA I   + GS L     +  R++ VN       +  AAR M     G I+  AS    
Sbjct: 83  NNAAIA--APGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGL 140
Query: 155 IAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKG---GVDPALI 211
            A   + AY  SK G++ L + LA +L    IRVN V+P  +AT   ++      DP   
Sbjct: 141 FAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERT 200
Query: 212 ESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFS 258
                 +  L+    K + +A A L+LAS+++S+++G  L VDGG +
Sbjct: 201 RRDWEDLHALR-RLGKPEEVAEAVLFLASEKASFITGAILPVDGGMT 246

>pdb|1HXH|A Chain A, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID Dehydrogenase Length = 253

Iteration: 1
 Score = 95.1 bits (235), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 116/258 (44%), Gaps = 30/258 (11%)
Query: 12  RLEGKVXXXXXXXXXXXXXXVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDIS 71
           RL+GKV              V+L    GAKV  +D+ +  G+ LA +LG+   ++  D+S
Sbjct: 3   RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVS 62
Query: 72  NEDEVINLVDTAVSKFGKLDIMYNNAGIL---DRSFGSILDTPKSDLERLINVNTIGGFL 128
           +E +   ++     + G L+++ NNAGIL   D   G +      D  RL+ +NT   F+
Sbjct: 63  SEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRL-----EDFSRLLKINTESVFI 117
Query: 129 GAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQ--YGI 186
           G +     M  +  G I+  AS  + +       Y+ SK  +  L +  A    +  Y I
Sbjct: 118 GCQQGIAAM-KETGGSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAI 176
Query: 187 RVNCVSPYGLATGM---SMKGGV-------DPALIESSMSQMGNLKGEFLKTDGIANAAL 236
           RVN + P G+ T M   S+  GV       DP L         N  G     + IA   L
Sbjct: 177 RVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKL---------NRAGRAYMPERIAQLVL 227
Query: 237 YLASDESSYVSGQNLVVD 254
           +LASDESS +SG  L  D
Sbjct: 228 FLASDESSVMSGSELHAD 245

>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(F187a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 94.7 bits (234), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 121/251 (48%), Gaps = 6/251 (2%)
Query: 10  FKRLEGKVXXXXXXXXXXXXXXVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCD 69
           F  LEGKV               EL  E GAKV+     +   + ++D LG +   +  +
Sbjct: 7   FMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALN 66
Query: 70  ISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLG 129
           ++N + +  ++     +FG +DI+ NNAGI   +   ++   + +   ++  N    F  
Sbjct: 67  VTNPESIEAVLKAITDEFGGVDILVNNAGITRDNL--LMRMKEEEWSDIMETNLTSIFRL 124
Query: 130 AKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVN 189
           +K   R M+ +++G I+   S    +   G   Y  +K G++G  K +A E+   G+ VN
Sbjct: 125 SKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVN 184
Query: 190 CVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQ 249
            V+P  + T M+    ++     ++++Q+    G       IA+A  +LAS E++Y++G+
Sbjct: 185 TVAPGAIETDMTK--ALNDEQRTATLAQV--PAGRLGDPREIASAVAFLASPEAAYITGE 240
Query: 250 NLVVDGGFSVV 260
            L V+GG  ++
Sbjct: 241 TLHVNGGMYMI 251

>pdb|4IBO|A Chain A, Crystal Structure Of A Putative Gluconate Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506446) Length = 271

Iteration: 1
 Score = 93.6 bits (231), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 104/199 (52%), Gaps = 4/199 (2%)
Query: 59  LGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERL 118
           +G D   +  D+++E E+I        +   +DI+ NNAGI  R    +++   +D +R+
Sbjct: 73  VGHDAEAVAFDVTSESEIIEAFARLDEQGIDVDILVNNAGIQFRK--PMIELETADWQRV 130
Query: 119 INVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLA 178
           I+ N    F+  + AA+ M+P+  G I+   S  +E+A      YT++K GI  L + +A
Sbjct: 131 IDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELARATVAPYTVAKGGIKMLTRAMA 190
Query: 179 AELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYL 238
           AE  QYGI+ N + P  + T M+ +  +D    ++ +      K  + K   +   A++L
Sbjct: 191 AEWAQYGIQANAIGPGYMLTDMN-QALIDNPEFDAWVKARTPAK-RWGKPQELVGTAVFL 248
Query: 239 ASDESSYVSGQNLVVDGGF 257
           ++  S YV+GQ + VDGG 
Sbjct: 249 SASASDYVNGQIIYVDGGM 267

>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase (Fabg) From Vibrio Cholerae O1 Complexed With Nadp+ (Space Group P62) Length = 251

Iteration: 1
 Score = 93.2 bits (230), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 121/251 (48%), Gaps = 6/251 (2%)
Query: 10  FKRLEGKVXXXXXXXXXXXXXXVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCD 69
           F  LEGKV               EL  E GAKV+     +   + ++D LG +   +  +
Sbjct: 7   FMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALN 66
Query: 70  ISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLG 129
           ++N + +  ++     +FG +DI+ NNAGI   +   ++   + +   ++  N    F  
Sbjct: 67  VTNPESIEAVLKAITDEFGGVDILVNNAGITRDNL--LMRMKEEEWSDIMETNLTSIFRL 124
Query: 130 AKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVN 189
           +K   R M+ +++G I+   S    +   G   Y  +K G++G  K +A E+   G+ VN
Sbjct: 125 SKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVN 184
Query: 190 CVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQ 249
            V+P  + T M+    ++     ++++Q+    G       IA+A  +LAS E++Y++G+
Sbjct: 185 TVAPGFIETDMTK--ALNDEQRTATLAQV--PAGRLGDPREIASAVAFLASPEAAYITGE 240
Query: 250 NLVVDGGFSVV 260
            L V+GG  ++
Sbjct: 241 TLHVNGGMYMI 251

>pdb|1WMB|A Chain A, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate Dehydrogenase Length = 260

Iteration: 1
 Score = 92.8 bits (229), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 103/218 (47%), Gaps = 10/218 (4%)
Query: 49  DKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSIL 108
           +K+   LA + G  V Y   D+S  + V  LVD AV + G++DI+ NNAGI   +   I 
Sbjct: 43  EKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTAL--IE 100
Query: 109 DTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKY 168
           D P    + ++ +N    F G   A   M  Q  G I+  ASA   +A     AY  +K+
Sbjct: 101 DFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKH 160
Query: 169 GILGLVKCLAAELGQYGIRVNCVSPYGLAT--------GMSMKGGVDPALIESSMSQMGN 220
           G++G  K  A E    GI  N + P  + T         ++ K GVD       +     
Sbjct: 161 GVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQ 220
Query: 221 LKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFS 258
              +F+  + +   A++LASD ++ ++G  + VDGG++
Sbjct: 221 PSLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGGWT 258

>pdb|3T7C|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nad Length = 299

Iteration: 1
 Score = 92.4 bits (228), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 86/288 (29%), Positives = 137/288 (47%), Gaps = 42/288 (14%)
Query: 2   NGPSSAAPFKRLEGKVXXXXXXXXXXXXXXVELFHENGAKVVIADVQDKLG--------- 52
            GP S A   ++EGKV                     GA ++  DV  +L          
Sbjct: 17  QGPGSMA--GKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTP 74
Query: 53  EDLADK------LGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGS 106
           +DLA+       LG+ +     D+ + D +   VD  V++ G+LDI+  NA +   S G+
Sbjct: 75  DDLAETVRQVEALGRRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALA--SEGT 132
Query: 107 ILDT--PKSDLERLINVNTIGGFLGAKHA-ARVMVPQQKGCILFTASACTEIAGLGSPA- 162
            L+   PK+    +I+VN  G ++ A+ A   +M  ++ G I+FT+S    I GL     
Sbjct: 133 RLNRMDPKT-WRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSS----IGGLRGAEN 187
Query: 163 ---YTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGV---------DPAL 210
              Y  SK+G+ GL++ +A ELG   IRVN V P  +AT M +             +P +
Sbjct: 188 IGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTV 247
Query: 211 --IESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGG 256
              + +  QM  L   +++   I+NA L+L SD++ Y++G +L VDGG
Sbjct: 248 EDFQVASRQMHVLPIPYVEPADISNAILFLVSDDARYITGVSLPVDGG 295

>pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(Y155f) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 91.7 bits (226), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 121/251 (48%), Gaps = 6/251 (2%)
Query: 10  FKRLEGKVXXXXXXXXXXXXXXVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCD 69
           F  LEGKV               EL  E GAKV+     +   + ++D LG +   +  +
Sbjct: 7   FMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALN 66
Query: 70  ISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLG 129
           ++N + +  ++     +FG +DI+ NNAGI   +   ++   + +   ++  N    F  
Sbjct: 67  VTNPESIEAVLKAITDEFGGVDILVNNAGITRDNL--LMRMKEEEWSDIMETNLTSIFRL 124
Query: 130 AKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVN 189
           +K   R M+ +++G I+   S    +   G   +  +K G++G  K +A E+   G+ VN
Sbjct: 125 SKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANFAAAKAGVIGFTKSMAREVASRGVTVN 184
Query: 190 CVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQ 249
            V+P  + T M+    ++     ++++Q+    G       IA+A  +LAS E++Y++G+
Sbjct: 185 TVAPGFIETDMTK--ALNDEQRTATLAQV--PAGRLGDPREIASAVAFLASPEAAYITGE 240
Query: 250 NLVVDGGFSVV 260
            L V+GG  ++
Sbjct: 241 TLHVNGGMYMI 251

>pdb|3UWR|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Strain 104 Length = 286

Iteration: 1
 Score = 91.7 bits (226), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 107/221 (48%), Gaps = 25/221 (11%)
Query: 54  DLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILD--RSFGSILDTP 111
           DL   L + +     D+ + + + + VD+ V + G+LDI+  NAG+    R    I D  
Sbjct: 69  DLVKDLDRRIVTAQVDVRDFEALKSAVDSGVEQLGRLDIIVANAGVGTDGRKLHKIRDNV 128
Query: 112 KSDLERLINVNTIGGFLGAKHAARVMVPQ-----QKGCILFTASACTEIAGLGSPAYTIS 166
             D+   I++N      G  H  +  VP      + G I+ T+S     A   +  Y  +
Sbjct: 129 WQDM---IDIN----LTGVWHTVKAGVPHVLSGGRGGSIVLTSSVGGRKAYPNTGHYIAA 181
Query: 167 KYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGV----DPALIE------SSMS 216
           K+G++GL++  A ELG + IRVN V P  ++T M M         P L        + +S
Sbjct: 182 KHGVIGLMRAFAVELGPHMIRVNAVLPTQVSTTMVMNDQTFRLFRPDLENPGPDDFAPIS 241
Query: 217 Q-MGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGG 256
           Q M  L   ++    I+NA L+LASDES YV+G +L VD G
Sbjct: 242 QMMHTLPVPWVDASDISNAVLFLASDESRYVTGVSLPVDAG 282

>pdb|2ZTU|A Chain A, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase Complexed With Nad+ Length = 260

Iteration: 1
 Score = 91.3 bits (225), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 103/218 (47%), Gaps = 10/218 (4%)
Query: 49  DKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSIL 108
           +K+   LA + G  V Y   D+S  + V  LVD AV + G++DI+ NNAGI   +   I 
Sbjct: 43  EKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTAL--IE 100
Query: 109 DTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKY 168
           D P    + ++ +N    F G   A   M  Q  G I+  ASA   +A     AY  +K+
Sbjct: 101 DFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKH 160
Query: 169 GILGLVKCLAAELGQYGIRVNCVSPYGLA--------TGMSMKGGVDPALIESSMSQMGN 220
           G++G  K  A E    GI  N + P  +         + ++ K GVD       +     
Sbjct: 161 GVVGFTKVTALETAGQGITANAICPGWVRAPLVEKQISALAEKNGVDQETAARELLSEKQ 220
Query: 221 LKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFS 258
              +F+  + +   A++LASD ++ ++G  + VDGG++
Sbjct: 221 PSLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGGWT 258

>pdb|2ZTM|A Chain A, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase Length = 260

Iteration: 1
 Score = 91.3 bits (225), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 103/218 (47%), Gaps = 10/218 (4%)
Query: 49  DKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSIL 108
           +K+   LA + G  V Y   D+S  + V  LVD AV + G++DI+ NNAGI   +   I 
Sbjct: 43  EKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTAL--IE 100
Query: 109 DTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKY 168
           D P    + ++ +N    F G   A   M  Q  G I+  ASA   +A     AY  +K+
Sbjct: 101 DFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKH 160
Query: 169 GILGLVKCLAAELGQYGIRVNCVSPYGLA--------TGMSMKGGVDPALIESSMSQMGN 220
           G++G  K  A E    GI  N + P  +         + ++ K GVD       +     
Sbjct: 161 GVVGFTKVTALETAGQGITANAICPGWVRSPLVEKQISALAEKNGVDQETAARELLSEKQ 220
Query: 221 LKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFS 258
              +F+  + +   A++LASD ++ ++G  + VDGG++
Sbjct: 221 PSLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGGWT 258

>pdb|1IY8|A Chain A, Crystal Structure Of Levodione Reductase Length = 267

Iteration: 1
 Score = 90.9 bits (224), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 110/203 (54%), Gaps = 9/203 (4%)
Query: 62  DVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINV 121
           +V     D+S+E +V   V     +FG++D  +NNAGI  +   +   T  ++ ++++++
Sbjct: 65  EVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFT-AAEFDKVVSI 123
Query: 122 NTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPA-YTISKYGILGLVKCLAAE 180
           N  G FLG +   ++M  Q  G ++ TAS    I G+G+ + Y  +K+G++GL +  A E
Sbjct: 124 NLRGVFLGLEKVLKIMREQGSGMVVNTASVGG-IRGIGNQSGYAAAKHGVVGLTRNSAVE 182
Query: 181 LGQYGIRVNCVSPYGLATGM---SMKGGVDPALIESSMSQM--GNLKGEFLKTDGIANAA 235
            G+YGIR+N ++P  + T M   SMK  +DP     +  +    N    + +   IA   
Sbjct: 183 YGRYGIRINAIAPGAIWTPMVENSMK-QLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVV 241
Query: 236 LYLASDESSYVSGQNLVVDGGFS 258
            +L SD++SYV+   + +DGG S
Sbjct: 242 AFLLSDDASYVNATVVPIDGGQS 264

>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 90.9 bits (224), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 120/251 (47%), Gaps = 6/251 (2%)
Query: 10  FKRLEGKVXXXXXXXXXXXXXXVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCD 69
           F  LEGKV               EL  E GAKV+     +   + ++D LG +   +  +
Sbjct: 7   FMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALN 66
Query: 70  ISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLG 129
           ++N + +  ++     +FG +DI+ NNA I   +   ++   + +   ++  N    F  
Sbjct: 67  VTNPESIEAVLKAITDEFGGVDILVNNAAITRDNL--LMRMKEEEWSDIMETNLTSIFRL 124
Query: 130 AKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVN 189
           +K   R M+ +++G I+   S    +   G   Y  +K G++G  K +A E+   G+ VN
Sbjct: 125 SKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVN 184
Query: 190 CVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQ 249
            V+P  + T M+    ++     ++++Q+    G       IA+A  +LAS E++Y++G+
Sbjct: 185 TVAPGFIETDMTK--ALNDEQRTATLAQVP--AGRLGDPREIASAVAFLASPEAAYITGE 240
Query: 250 NLVVDGGFSVV 260
            L V+GG  ++
Sbjct: 241 TLHVNGGMYMI 251

>pdb|3ENN|A Chain A, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE FROM BRUCELLA Melitensis (P43212) Length = 249

Iteration: 1
 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 112/228 (49%), Gaps = 10/228 (4%)
Query: 35  FHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMY 94
            H  GA V +   +++  ++LA +LG+ +     ++S+ + V  L   A  + G +DI+ 
Sbjct: 30  LHAQGAIVGLHGTREEKLKELAAELGERIFVFPANLSDREAVKALGQKAEEEMGGVDILV 89
Query: 95  NNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTE 154
           NNAGI     G  +     D + ++ VN    F   +     M+ ++ G I+   S    
Sbjct: 90  NNAGITRD--GLFVRMSDEDWDAVLTVNLTSVFNLTRELTHPMMRRRNGRIINITSIVGV 147
Query: 155 IAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESS 214
               G   Y  SK G++G  K LA E+    + VNC++P  + + M+ K      L E  
Sbjct: 148 TGNPGQANYCASKAGLIGFSKSLAQEIASRNVTVNCIAPGFIESAMTGK------LNEKQ 201
Query: 215 MSQ-MGNLKGEFLKTDG-IANAALYLASDESSYVSGQNLVVDGGFSVV 260
               MGN+  + +     IA A +YLASDE++YV+GQ L V+GG +++
Sbjct: 202 KDAIMGNIPMKRMGVGADIAAAVVYLASDEAAYVTGQTLHVNGGMAMI 249

>pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92d) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 120/251 (47%), Gaps = 6/251 (2%)
Query: 10  FKRLEGKVXXXXXXXXXXXXXXVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCD 69
           F  LEGKV               EL  E GAKV+     +   + ++D LG +   +  +
Sbjct: 7   FMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALN 66
Query: 70  ISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLG 129
           ++N + +  ++     +FG +DI+ NNA I   +   ++   + +   ++  N    F  
Sbjct: 67  VTNPESIEAVLKAITDEFGGVDILVNNADITRDNL--LMRMKEEEWSDIMETNLTSIFRL 124
Query: 130 AKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVN 189
           +K   R M+ +++G I+   S    +   G   Y  +K G++G  K +A E+   G+ VN
Sbjct: 125 SKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVN 184
Query: 190 CVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQ 249
            V+P  + T M+    ++     ++++Q+    G       IA+A  +LAS E++Y++G+
Sbjct: 185 TVAPGFIETDMTK--ALNDEQRTATLAQVP--AGRLGDPREIASAVAFLASPEAAYITGE 240
Query: 250 NLVVDGGFSVV 260
            L V+GG  ++
Sbjct: 241 TLHVNGGMYMI 251

>pdb|3EMK|A Chain A, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE From Brucella Melitensis Length = 246

Iteration: 1
 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 112/228 (49%), Gaps = 10/228 (4%)
Query: 35  FHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMY 94
            H  GA V +   +++  ++LA +LG+ +     ++S+ + V  L   A  + G +DI+ 
Sbjct: 27  LHAQGAIVGLHGTREEKLKELAAELGERIFVFPANLSDREAVKALGQKAEEEMGGVDILV 86
Query: 95  NNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTE 154
           NNAGI     G  +     D + ++ VN    F   +     M+ ++ G I+   S    
Sbjct: 87  NNAGITRD--GLFVRMSDEDWDAVLTVNLTSVFNLTRELTHPMMRRRNGRIINITSIVGV 144
Query: 155 IAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESS 214
               G   Y  SK G++G  K LA E+    + VNC++P  + + M+ K      L E  
Sbjct: 145 TGNPGQANYCASKAGLIGFSKSLAQEIASRNVTVNCIAPGFIESAMTGK------LNEKQ 198
Query: 215 MSQ-MGNLKGEFLKTDG-IANAALYLASDESSYVSGQNLVVDGGFSVV 260
               MGN+  + +     IA A +YLASDE++YV+GQ L V+GG +++
Sbjct: 199 KDAIMGNIPMKRMGVGADIAAAVVYLASDEAAYVTGQTLHVNGGMAMI 246

>pdb|1EDO|A Chain A, The X-Ray Structure Of Beta-Keto Acyl Carrier Protein Reductase From Brassica Napus Complexed With Nadp+ Length = 244

Iteration: 1
 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 64/216 (29%), Positives = 115/216 (53%), Gaps = 14/216 (6%)
Query: 50  KLGEDLADKL----GQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFG 105
           K  E+++ ++    GQ + +   D+S E +V  ++ TA+  +G +D++ NNAGI   +  
Sbjct: 37  KAAEEVSKQIEAYGGQAITF-GGDVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTL- 94
Query: 106 SILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTI 165
            ++   KS  + +I++N  G FL  + A ++M+ ++KG I+  AS    I  +G   Y  
Sbjct: 95  -LIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAA 153
Query: 166 SKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLK-GE 224
           +K G++G  K  A E     I VN V P  +A+ M+ K G D   +E  +  +G +  G 
Sbjct: 154 AKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGED---MEKKI--LGTIPLGR 208
Query: 225 FLKTDGIANAALYLA-SDESSYVSGQNLVVDGGFSV 259
             + + +A    +LA S  +SY++GQ   +DGG ++
Sbjct: 209 TGQPENVAGLVEFLALSPAASYITGQAFTIDGGIAI 244

>pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein Reductase, Fabg, From Staphylococcus Aureus Length = 246

Iteration: 1
 Score = 89.7 bits (221), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 100/197 (50%), Gaps = 6/197 (3%)
Query: 60  GQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLI 119
           G D   I  ++++ DEV   +   VS+FG LD++ NNAGI   +   +    + + + +I
Sbjct: 53  GVDSFAIQANVADADEVKAXIKEVVSQFGSLDVLVNNAGITRDNL--LXRXKEQEWDDVI 110
Query: 120 NVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAA 179
           + N  G F   + A    + Q+ G I+  +S    +   G   Y  +K G++GL K  A 
Sbjct: 111 DTNLKGVFNCIQKATPQXLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAAR 170
Query: 180 ELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLA 239
           EL   GI VN V+P  + +  +    +   L E  ++Q+   +  F +   IAN   +LA
Sbjct: 171 ELASRGITVNAVAPGFIVSDXT--DALSDELKEQXLTQIPLAR--FGQDTDIANTVAFLA 226
Query: 240 SDESSYVSGQNLVVDGG 256
           SD++ Y++GQ + V+GG
Sbjct: 227 SDKAKYITGQTIHVNGG 243

>pdb|3F9I|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase Rickettsia Prowazekii Length = 249

Iteration: 1
 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/228 (28%), Positives = 120/228 (52%), Gaps = 10/228 (4%)
Query: 33  ELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDI 92
            L H+ G+KV+I+   ++  + L + L  +     C+++N++E  NL+    SK   LDI
Sbjct: 32  RLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLI----SKTSNLDI 87
Query: 93  MYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASAC 152
           +  NAGI   +    +     D +++I++N    F+  + A + M+ ++ G I+  +S  
Sbjct: 88  LVCNAGITSDTLA--IRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIV 145
Query: 153 TEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIE 212
                 G   Y  SK G++G+ K L+ E+   GI VN V+P  + + M+ K  ++    E
Sbjct: 146 GIAGNPGQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDK--LNEKQRE 203
Query: 213 SSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVV 260
           + + ++    G +   + +A A  +LAS+ +SY++GQ L V+GG  +V
Sbjct: 204 AIVQKIP--LGTYGIPEDVAYAVAFLASNNASYITGQTLHVNGGMLMV 249

>pdb|1ZJY|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus Brevis In Complex With Phenylethanol And Nadh Length = 251

Iteration: 1
 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/253 (30%), Positives = 117/253 (46%), Gaps = 12/253 (4%)
Query: 12  RLEGKVXXXXXXXXXXXXXXVELFHENGAKVVIADVQDKLGEDLADKLG--QDVCYIHCD 69
           RL+GKV                 F E GAKV+I D    +GE  A  +G    + +   D
Sbjct: 3   RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITDRHSDVGEKAAKSVGTPDQIQFFQHD 62
Query: 70  ISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLG 129
            S+ED    L D     FG +  + NNAGI      S+ +T  ++  +L+ VN  G F G
Sbjct: 63  SSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNK--SVEETTTAEWRKLLAVNLDGVFFG 120
Query: 130 AKHAARVMVPQQKGCILFTASACTEIAGLGS-PAYTISKYGILGLVKCLAAE--LGQYGI 186
            +   + M  +  G  +   S+     G  S  AY  SK  +  + K  A +  L  Y +
Sbjct: 121 TRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDV 180
Query: 187 RVNCVSPYGLATGMSMK-GGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSY 245
           RVN V P  + T +     G + A+ + + + MG++ GE    + IA   +YLAS+ES +
Sbjct: 181 RVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGHI-GE---PNDIAYICVYLASNESKF 236
Query: 246 VSGQNLVVDGGFS 258
            +G   VVDGG++
Sbjct: 237 ATGSEFVVDGGYT 249

>pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein] Reductase From E. Coli. Length = 244

Iteration: 1
 Score = 89.0 bits (219), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 115/248 (46%), Gaps = 6/248 (2%)
Query: 13  LEGKVXXXXXXXXXXXXXXVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISN 72
            EGK+               E     GAKV+     +   + ++D LG +   +  ++++
Sbjct: 3   FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTD 62
Query: 73  EDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKH 132
              + ++++   ++FG++DI+ NNAGI   +   ++     +   +I  N    F  +K 
Sbjct: 63  PASIESVLEKIRAEFGEVDILVNNAGITRDNL--LMRMKDEEWNDIIETNLSSVFRLSKA 120
Query: 133 AARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVS 192
             R M+ ++ G I+   S    +   G   Y  +K G++G  K LA E+   GI VN V+
Sbjct: 121 VMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVA 180
Query: 193 PYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLV 252
           P  + T M+     D      +    G L G       IANA  +LASDE++Y++G+ L 
Sbjct: 181 PGFIETDMTRALSDDQRAGILAQVPAGRLGG----AQEIANAVAFLASDEAAYITGETLH 236
Query: 253 VDGGFSVV 260
           V+GG  +V
Sbjct: 237 VNGGMYMV 244

>pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant In Complex With Nadph Fragment Length = 244

Iteration: 1
 Score = 87.8 bits (216), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 65/248 (26%), Positives = 115/248 (46%), Gaps = 6/248 (2%)
Query: 13  LEGKVXXXXXXXXXXXXXXVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISN 72
            EGK+               E     GAKV+     +   + ++D LG +   +  ++++
Sbjct: 3   FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTD 62
Query: 73  EDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKH 132
              + ++++   ++FG++DI+ NNAGI   +   ++     +   +I  N    F  +K 
Sbjct: 63  PASIESVLEKIRAEFGEVDILVNNAGITRDNL--LMRMKDEEWNDIIETNLSSVFRLSKA 120
Query: 133 AARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVS 192
             R M+ ++ G I+   S    +   G   +  +K G++G  K LA E+   GI VN V+
Sbjct: 121 VMRAMMKKRHGRIITIGSVVGTMGNGGQANFAAAKAGLIGFSKSLAREVASRGITVNVVA 180
Query: 193 PYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLV 252
           P  + T M+     D      +    G L G       IANA  +LASDE++Y++G+ L 
Sbjct: 181 PGFIETDMTRALSDDQRAGILAQVPAGRLGG----AQEIANAVAFLASDEAAYITGETLH 236
Query: 253 VDGGFSVV 260
           V+GG  +V
Sbjct: 237 VNGGMYMV 244

>pdb|3GAF|A Chain A, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid Dehydrogenase From Brucella Melitensis Length = 256

Iteration: 1
 Score = 87.4 bits (215), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 112/225 (49%), Gaps = 9/225 (4%)
Query: 35  FHENGAKVVIADVQDKLGEDLADKLGQ---DVCYIHCDISNEDEVINLVDTAVSKFGKLD 91
           F + GA VV+ D++ +  E +A  + Q       + C++++E     ++  A+ +FGK+ 
Sbjct: 32  FAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGKIT 91
Query: 92  IMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASA 151
           ++ NNAG          D P SD E    +N    F  ++ AA  M     G IL  +S 
Sbjct: 92  VLVNNAG---GGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSM 148
Query: 152 CTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALI 211
             E   +   +Y  SK  +  L + +A ++G  GIRVN ++P  + T  ++   + P  I
Sbjct: 149 AGENTNVRMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTD-ALATVLTPE-I 206
Query: 212 ESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGG 256
           E +M +   L G   +   IANAAL+L S  ++++SGQ L V GG
Sbjct: 207 ERAMLKHTPL-GRLGEAQDIANAALFLCSPAAAWISGQVLTVSGG 250

>pdb|1X1E|A Chain A, Crystal Structure Of Tt0495 Protein From Thermus Thermophilus Hb8 Length = 239

Iteration: 1
 Score = 87.4 bits (215), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 106/222 (47%), Gaps = 12/222 (5%)
Query: 38  NGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNA 97
            G +V IA       E+ A  LG     +  D+  +D    LV  A+   G L ++ + A
Sbjct: 25  RGYRVAIASRNP---EEAAQSLG--AVPLPTDLEKDDPK-GLVKRALEALGGLHVLVHAA 78
Query: 98  GILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAG 157
            +  R     L+    +  R++ ++    FL A+ AA  M     G +LF  S  T  AG
Sbjct: 79  AVNVRK--PALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAG 136
Query: 158 --LGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSM 215
             +  PAYT +K  +LGL + LA E  + GIRVN + P  + T  ++    +P L E   
Sbjct: 137 GPVPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQNPELYEPIT 196
Query: 216 SQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGF 257
           +++    G + + + IA  A  L  DE+ Y++GQ + VDGGF
Sbjct: 197 ARIP--MGRWARPEEIARVAAVLCGDEAEYLTGQAVAVDGGF 236

>pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier Protein) Reductase Length = 248

Iteration: 1
 Score = 87.4 bits (215), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 72/261 (27%), Positives = 122/261 (46%), Gaps = 32/261 (12%)
Query: 12  RLEGKVXXXXXXXXXXXXXXVELFHENGAKVVIA----DVQDKLGEDLADKLGQDVCYIH 67
           +L+GKV               E     G+ V+I     +    + E++A+K G     + 
Sbjct: 4   KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVE 63
Query: 68  CDISNED-------EVINLVDTAVSKFGKLDIMYNNAGIL-DRSFGSILDTPKSDLERLI 119
            ++ +E+       E+ NLVD        +DI+ NNAGI  D+ F   L     D E ++
Sbjct: 64  MNLLSEESINKAFEEIYNLVD-------GIDILVNNAGITRDKLF---LRMSLLDWEEVL 113
Query: 120 NVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAA 179
            VN  G FL  +++ R M+ Q+ G I+  +S       +G   Y+ +K G++G  K LA 
Sbjct: 114 KVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTKAGLIGFTKSLAK 173
Query: 180 ELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLK---GEFLKTDGIANAAL 236
           EL    + VN V+P  + T M+       A++   + Q    +   G F   + +AN  L
Sbjct: 174 ELAPRNVLVNAVAPGFIETDMT-------AVLSEEIKQKYKEQIPLGRFGSPEEVANVVL 226
Query: 237 YLASDESSYVSGQNLVVDGGF 257
           +L S+ +SY++G+ + V+GG 
Sbjct: 227 FLCSELASYITGEVIHVNGGM 247

>pdb|3GRP|A Chain A, 2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Bartonella Henselae Length = 266

Iteration: 1
 Score = 87.4 bits (215), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 112/230 (48%), Gaps = 14/230 (6%)
Query: 35  FHENGAKVVIADV-QDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM 93
           FH  GA V +    +DKL E  AD LG+DV     ++S+   +  L + A  +   +DI+
Sbjct: 47  FHAQGAIVGLHGTREDKLKEIAAD-LGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDIL 105
Query: 94  YNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACT 153
            NNAGI     G  +     D + ++ VN        +     M+ ++ G I+   S   
Sbjct: 106 VNNAGITRD--GLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVG 163
Query: 154 EIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMK---GGVDPAL 210
            +   G   Y  +K G++G  K LA E+    I VNC++P  + + M+ K      +  +
Sbjct: 164 VVGNPGQTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKLNEKQKEAIM 223
Query: 211 IESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVV 260
               M +MG   GE      IA A +YLASDE++Y++GQ L ++GG +++
Sbjct: 224 AMIPMKRMG--IGE-----EIAFATVYLASDEAAYLTGQTLHINGGMAMI 266

>pdb|3PGX|A Chain A, Crystal Structure Of A Putative Carveol Dehydrogenase From Mycobacterium Paratuberculosis Bound To Nicotinamide Adenine Dinucleotide Length = 280

Iteration: 1
 Score = 87.4 bits (215), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 18/213 (8%)
Query: 55  LADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSD 114
           L +  G+       D+ ++  +  LV   + +FG+LD++  NAG+L  S+G + +     
Sbjct: 71  LVEDQGRKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVL--SWGRVWELTDEQ 128
Query: 115 LERLINVNTIGGFLGAKHAARVMVPQ-QKGCILFTASACTEIAGLGSPAYTISKYGILGL 173
            + +I VN  G +   +     M+     G I+  +S+    A  G+  Y+ SK+G+  L
Sbjct: 129 WDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPGNGHYSASKHGLTAL 188
Query: 174 VKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDP-ALIE---------SSMSQMGNLKG 223
              LA ELG+YGIRVN + PY + T M     ++P A++E          S   M     
Sbjct: 189 TNTLAIELGEYGIRVNSIHPYSVETPM-----IEPEAMMEIFARHPSFVHSFPPMPVQPN 243
Query: 224 EFLKTDGIANAALYLASDESSYVSGQNLVVDGG 256
            F+  D +A+   +LA D S  ++G  + VD G
Sbjct: 244 GFMTADEVADVVAWLAGDGSGTLTGTQIPVDKG 276

>pdb|2ET6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candida Tropicalis Peroxisomal Multifunctional Enzyme Type 2 Length = 604

Iteration: 1
 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 78/269 (28%), Positives = 120/269 (44%), Gaps = 23/269 (8%)
Query: 5   SSAAPFKRLEGKVXXXXXXXXXXXXXXVELFHENGAKVVIADVQDKLGE-DLADKLGQDV 63
           +S AP   L+ KV               + F + GAKVV+ D +D     D     G + 
Sbjct: 312 ASGAPTVSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAAGGEA 371
Query: 64  CYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGIL-DRSFGSILDTPKSDLERLINVN 122
                D++ + E I  +   + K+G +DI+ NNAGIL DRSF  +    K + + +  V+
Sbjct: 372 WPDQHDVAKDSEAI--IKNVIDKYGTIDILVNNAGILRDRSFAKM---SKQEWDSVQQVH 426
Query: 123 TIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELG 182
            IG F  ++ A    V +Q G I+   S        G   Y+ SK GILGL K +A E  
Sbjct: 427 LIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKAGILGLSKTMAIEGA 486
Query: 183 QYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDE 242
           +  I+VN V+P+   T M             ++S M          D +A   +YL +D+
Sbjct: 487 KNNIKVNIVAPHA-ETAM-------------TLSIMREQDKNLYHADQVAPLLVYLGTDD 532
Query: 243 SSYVSGQNLVVDGGFSVVNPTVMRAYGLI 271
              V+G+   + GG+ + N    RA G +
Sbjct: 533 VP-VTGETFEIGGGW-IGNTRWQRAKGAV 559

>pdb|4IIN|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Helicobacter Pylori 26695 Complexed With Nad+ Length = 271

Iteration: 1
 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 63/216 (29%), Positives = 106/216 (49%), Gaps = 13/216 (6%)
Query: 45  ADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSF 104
           A+V D L  +L +K G     I  D ++E + I  + T V   G L  + NNAG++    
Sbjct: 64  AEVADALKNELEEK-GYKAAVIKFDAASESDFIEAIQTIVQSDGGLSYLVNNAGVVRDKL 122
Query: 105 GSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYT 164
              + T   D   +I+ N    F+G + A +VM   + G ++  AS   E   +G   Y+
Sbjct: 123 AIKMKTE--DFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMGQTNYS 180
Query: 165 ISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGM--SMKGGVDPALIES-SMSQMGNL 221
            SK G++ + K  A E     IR N V+P  + T M  ++K  +    +++  ++++G+ 
Sbjct: 181 ASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKDELKADYVKNIPLNRLGSA 240
Query: 222 KGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGF 257
           K        +A A  +L SD SSY++G+ L V+GG 
Sbjct: 241 K-------EVAEAVAFLLSDHSSYITGETLKVNGGL 269

>pdb|1NXQ|A Chain A, Crystal Structure Of R-Alcohol Dehydrogenase (Radh) (Apoenyzme) From Lactobacillus Brevis Length = 251

Iteration: 1
 Score = 86.3 bits (212), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/253 (30%), Positives = 116/253 (45%), Gaps = 12/253 (4%)
Query: 12  RLEGKVXXXXXXXXXXXXXXVELFHENGAKVVIADVQDKLGEDLADKLG--QDVCYIHCD 69
           RL+GKV                 F E GAKV+I      +GE  A  +G    + +   D
Sbjct: 3   RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHD 62
Query: 70  ISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLG 129
            S+ED    L D     FG +  + NNAGI      S+ +T  ++  +L+ VN  G F G
Sbjct: 63  SSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNK--SVEETTTAEWRKLLAVNLDGVFFG 120
Query: 130 AKHAARVMVPQQKGCILFTASACTEIAGLGS-PAYTISKYGILGLVKCLAAE--LGQYGI 186
            +   + M  +  G  +   S+     G  S  AY  SK  +  + K  A +  L  Y +
Sbjct: 121 TRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDV 180
Query: 187 RVNCVSPYGLATGMSMK-GGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSY 245
           RVN V P  + T +     G + A+ + + + MG++ GE    + IA   +YLAS+ES +
Sbjct: 181 RVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGHI-GE---PNDIAYICVYLASNESKF 236
Query: 246 VSGQNLVVDGGFS 258
            +G   VVDGG++
Sbjct: 237 ATGSEFVVDGGYT 249

>pdb|3IS3|A Chain A, Crystal Structure Of 17beta-Hydroxysteroid Dehydrogenase (Apo Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 86.3 bits (212), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/235 (30%), Positives = 114/235 (48%), Gaps = 25/235 (10%)
Query: 39  GAKVVI------ADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDI 92
           GAKVV+       D +  + E  A  LG D   I  DI    E++ L D AV+ FG LDI
Sbjct: 42  GAKVVVNYANSTKDAEKVVSEIKA--LGSDAIAIKADIRQVPEIVKLFDQAVAHFGHLDI 99
Query: 93  MYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASAC 152
             +N+G++  SFG + D  + + +R+ ++NT G F  A+ A R +   + G I+ T+S  
Sbjct: 100 AVSNSGVV--SFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLT--EGGRIVLTSSNT 155
Query: 153 TEIAGLGSPA-YTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALI 211
           ++   +   + Y+ SK  +   V+  + + G   I VN V+P G  T M  +  V    I
Sbjct: 156 SKDFSVPKHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHE--VSHHYI 213
Query: 212 ESSMSQMGNLKGEF------LKTDG----IANAALYLASDESSYVSGQNLVVDGG 256
            +  S     + +       L  +G    +AN   +L S E  +V+G+ L +DGG
Sbjct: 214 PNGTSYTAEQRQQMAAHASPLHRNGWPQDVANVVGFLVSKEGEWVNGKVLTLDGG 268

>pdb|3N74|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reduc Brucella Melitensis Length = 261

Iteration: 1
 Score = 85.9 bits (211), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 86/271 (31%), Positives = 129/271 (47%), Gaps = 29/271 (10%)
Query: 3   GPSSAAPFKRLEGKVXXXXXXXXXXXXXXVELFHENGAKVVIADVQDKLG-EDLADKLGQ 61
           GP S +    LEGKV               + F + GAKVVI D +DK G E +A ++G 
Sbjct: 1   GPGSMS----LEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVD-RDKAGAERVAGEIGD 55
Query: 62  DVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINV 121
               +  DIS E +V   V+ A+SKFGK+DI+ NNAGI  +   + L  P+ + +R++ V
Sbjct: 56  AALAVAADISKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPE-EFDRIVGV 114
Query: 122 NTIGGFLGAKHAARVMVPQQK-------GCILFTASACTEIAGLGSPA-----YTISKYG 169
           N  G +L        ++P  K        C++   ++     G G P      Y  +K  
Sbjct: 115 NVRGVYLMTSK----LIPHFKENGAKGQECVILNVAST----GAGRPRPNLAWYNATKGW 166
Query: 170 ILGLVKCLAAELGQYGIRVNCVSPYGLATG-MSMKGGVDPALIESSMSQMGNLKGEFLKT 228
           ++ + K LA EL    IRV  ++P    T  ++   G D   I         + G  LK 
Sbjct: 167 VVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPM-GRLLKP 225
Query: 229 DGIANAALYLASDESSYVSGQNLVVDGGFSV 259
           D +A AA +L S ++S ++G  L VDGG S+
Sbjct: 226 DDLAEAAAFLCSPQASMITGVALDVDGGRSI 256

>pdb|3ITD|A Chain A, Crystal Structure Of An Inactive 17beta-Hydroxysteroid Dehydrogenase (Y167f Mutated Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 85.9 bits (211), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/237 (29%), Positives = 114/237 (48%), Gaps = 29/237 (12%)
Query: 39  GAKVVI------ADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDI 92
           GAKVV+       D +  + E  A  LG D   I  DI    E++ L D AV+ FG LDI
Sbjct: 42  GAKVVVNYANSTKDAEKVVSEIKA--LGSDAIAIKADIRQVPEIVKLFDQAVAHFGHLDI 99
Query: 93  MYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASAC 152
             +N+G++  SFG + D  + + +R+ ++NT G F  A+ A R +   + G I+ T+S  
Sbjct: 100 AVSNSGVV--SFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLT--EGGRIVLTSSNT 155
Query: 153 TEIAGLGSPAYTI---SKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPA 209
           ++      P +++   SK  +   V+  + + G   I VN V+P G  T M  +  V   
Sbjct: 156 SK--DFSVPKHSLFSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHE--VSHH 211
Query: 210 LIESSMSQMGNLKGEF------LKTDG----IANAALYLASDESSYVSGQNLVVDGG 256
            I +  S     + +       L  +G    +AN   +L S E  +V+G+ L +DGG
Sbjct: 212 YIPNGTSYTAEQRQQMAAHASPLHRNGWPQDVANVVGFLVSKEGEWVNGKVLTLDGG 268

>pdb|3UVE|A Chain A, Crystal Structure Of Carveol Dehydrogenase ((+)-Trans-Carveol Dehydrogenase) From Mycobacterium Avium Length = 286

Iteration: 1
 Score = 85.9 bits (211), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 107/229 (46%), Gaps = 17/229 (7%)
Query: 43  VIADVQDKLGE--DLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGIL 100
           + A   + L E  DL     + +     D+ + D +   VD+ V + G+LDI+  NAGI 
Sbjct: 56  IPASTPEDLAETADLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGI- 114
Query: 101 DRSFGSILD-TPKSDLERLINVNTIGGFLGAKHAARVMVPQQKG-CILFTASACTEIAGL 158
             + G  LD T + D   +I++N  G +   K     M+   +G  I+ T+S     A  
Sbjct: 115 -GNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYP 173
Query: 159 GSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGV----DPALIESS 214
            +  Y  +K+G++GL++    ELGQ+ IRVN V P  + T M    G      P L    
Sbjct: 174 HTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPG 233
Query: 215 MSQMG-------NLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGG 256
              M         L   +++   I+NA L+ ASDE+ Y++G  L +D G
Sbjct: 234 PDDMAPICQMFHTLPIPWVEPIDISNAVLFFASDEARYITGVTLPIDAG 282

>pdb|3TZQ|B Chain B, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 271

Iteration: 1
 Score = 85.5 bits (210), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 61/219 (27%), Positives = 107/219 (48%), Gaps = 3/219 (1%)
Query: 39  GAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAG 98
           GA+VV+AD+ +      A  +G+   +   D++NE  V  L+D  +  FG+LDI+ NNA 
Sbjct: 35  GARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDIVDNNAA 94
Query: 99  ILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGL 158
             D +   +        +    VN  G  L  K+A   ++    G I+  +SA    A  
Sbjct: 95  HSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYD 154
Query: 159 GSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQM 218
            S AY  +K  I  L + +A + G++G+R N ++P GL     ++ G+   +++   +  
Sbjct: 155 MSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAP-GLVRTPRLEVGLPQPIVDIFATH- 212
Query: 219 GNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGF 257
            +L G   +   IA    +LASD +++++GQ +  D G 
Sbjct: 213 -HLAGRIGEPHEIAELVCFLASDRAAFITGQVIAADSGL 250

>pdb|1YDE|A Chain A, Crystal Structure Of Human Retinal Short-Chain DehydrogenaseREDUCTASE 3 Length = 270

Iteration: 1
 Score = 85.1 bits (209), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 111/229 (48%), Gaps = 10/229 (4%)
Query: 32  VELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLD 91
           V  F  +GA+VVI D  +  G  L  +L   V +I CD++ ED+V  LV   + +FG+LD
Sbjct: 26  VRAFVNSGARVVICDKDESGGRALEQELPGAV-FILCDVTQEDDVKTLVSETIRRFGRLD 84
Query: 92  IMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASA 151
            + NNAG          +T      +L+ +N +G +   K A   +   Q G ++  +S 
Sbjct: 85  CVVNNAG-HHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQ-GNVINISSL 142
Query: 152 CTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGV---DP 208
              I    +  Y  +K  +  + K LA +   YG+RVNC+SP  + T +  +      DP
Sbjct: 143 VGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDP 202
Query: 209 -ALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGG 256
            A I   M  +    G   +   +  AA++LAS E+++ +G  L+V GG
Sbjct: 203 RASIREGM--LAQPLGRMGQPAEVGAAAVFLAS-EANFCTGIELLVTGG 248

>pdb|3V2H|A Chain A, The Crystal Structure Of D-Beta-Hydroxybutyrate Dehydrogenase From Sinorhizobium Meliloti Length = 281

Iteration: 1
 Score = 84.7 bits (208), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 101/208 (48%), Gaps = 18/208 (8%)
Query: 63  VCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVN 122
           V +   D +   E+ +       +FG  DI+ NNAG+  +    I D P    +R+I VN
Sbjct: 78  VLHHPADXTKPSEIADXXAXVADRFGGADILVNNAGV--QFVEKIEDFPVEQWDRIIAVN 135
Query: 123 TIGGFLGAKHAARVMVPQQK----GCILFTASACTEIAGLGSPAYTISKYGILGLVKCLA 178
               F    H  R  +P  K    G I+  ASA   +A     AY  +K+GI GL K +A
Sbjct: 136 LSSSF----HTIRGAIPPXKKKGWGRIINIASAHGLVASPFKSAYVAAKHGIXGLTKTVA 191
Query: 179 AELGQYGIRVNCVSPYGLATGMSMKGGVDPA----LIESSMSQMGNLKGE----FLKTDG 230
            E+ + G+ VN + P  + T +  K   D A    + E  +     LKG+    F+  + 
Sbjct: 192 LEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVXLKGQPTKKFITVEQ 251
Query: 231 IANAALYLASDESSYVSGQNLVVDGGFS 258
           +A+ ALYLA D+++ ++G ++  DGG++
Sbjct: 252 VASLALYLAGDDAAQITGTHVSXDGGWT 279

>pdb|3S55|A Chain A, Crystal Structure Of A Putative Short-Chain DehydrogenaseREDUCTASE From Mycobacterium Abscessus Bound To Nad Length = 281

Iteration: 1
 Score = 84.7 bits (208), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 75/280 (26%), Positives = 114/280 (40%), Gaps = 31/280 (11%)
Query: 3   GPSSAAPFKRLEGKVXXXXXXXXXXXXXXVELFHENGAKVVIAD-------------VQD 49
           GP S A F   EGK                    E GA + I D               D
Sbjct: 1   GPGSMADF---EGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATAD 57
Query: 50  KLGEDLA--DKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSI 107
            L E +A  +K G+       D+ +   + + V  A    G +DI   NAGI   +   +
Sbjct: 58  DLAETVALVEKTGRRCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGI--STIALL 115
Query: 108 LDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISK 167
            +   +  + +I  N  G F      A  M+ +  G I+  +S     A     +Y  SK
Sbjct: 116 PEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANFAQASYVSSK 175
Query: 168 YGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMK----GGVDPAL-------IESSMS 216
           +G++GL KC A +L  YGI VN V+P  + T M+      G + P L       +ES  +
Sbjct: 176 WGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFA 235
Query: 217 QMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGG 256
            +      FLK + +  A L+L  + SS+++G  L +D G
Sbjct: 236 SLHLQYAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDAG 275

>pdb|1GEG|A Chain A, Cryatal Structure Analysis Of Meso-2,3-Butanediol Dehydrogenase Length = 256

Iteration: 1
 Score = 84.3 bits (207), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 112/236 (47%), Gaps = 21/236 (8%)
Query: 37  ENGAKVVIADVQDKLGEDLADKLGQ---DVCYIHCDISNEDEVINLVDTAVSKFGKLDIM 93
           ++G  V IAD  D   + +A ++ Q       +  D+S+ D+V   V+ A    G  D++
Sbjct: 24  KDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDVI 83
Query: 94  YNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACT 153
            NNAG+   +   I       ++++ N+N  G   G + A      +  G  +   +AC+
Sbjct: 84  VNNAGVAPST--PIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKII--NACS 139
Query: 154 EIAGLGSP---AYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPAL 210
           +   +G+P    Y+ SK+ + GL +  A +L   GI VN   P  + T M  +  +D  +
Sbjct: 140 QAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAE--IDRQV 197
Query: 211 IESSMSQMGNLKGEFLKT---------DGIANAALYLASDESSYVSGQNLVVDGGF 257
            E++   +G    EF K          + +A    YLAS +S Y++GQ+L++DGG 
Sbjct: 198 SEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSDYMTGQSLLIDGGM 253

>pdb|3O4R|A Chain A, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR FAMILY) MEMBER 4 (Dhrs4) Length = 261

Iteration: 1
 Score = 84.3 bits (207), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 112/225 (49%), Gaps = 10/225 (4%)
Query: 37  ENGAKVVIADV-QDKLGEDLADKLGQ--DVCYIHCDISNEDEVINLVDTAVSKFGKLDIM 93
           ++GA VV++   Q  + + +A   G+   V    C +   ++   LV TAV   G +DI+
Sbjct: 37  QDGAHVVVSSRKQQNVDQAVATLQGEGLSVTGTVCHVGKAEDRERLVATAVKLHGGIDIL 96
Query: 94  YNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACT 153
            +NA + +  FGSI+D  +   ++ +++N     L  K     M  +  G ++  +S   
Sbjct: 97  VSNAAV-NPFFGSIMDVTEEVWDKTLDINVKAPALMTKAVVPEMEKRGGGSVVIVSSIAA 155
Query: 154 EIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIES 213
                G   Y +SK  +LGL K LA EL    IRVNC++P  + T  S    +D    E 
Sbjct: 156 FSPSPGFSPYNVSKTALLGLTKTLAIELAPRNIRVNCLAPGLIKTSFSRMLWMDKEK-EE 214
Query: 214 SMSQMGNLK--GEFLKTDGIANAALYLASDESSYVSGQNLVVDGG 256
           SM +   ++  GE     GI +   +L S+++SY++G+ +VV GG
Sbjct: 215 SMKETLRIRRLGEPEDCAGIVS---FLCSEDASYITGETVVVGGG 256

>pdb|1JA9|A Chain A, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene Reductase In Complex With Nadph And Pyroquilon Length = 274

Iteration: 1
 Score = 83.2 bits (204), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 80/274 (29%), Positives = 120/274 (43%), Gaps = 30/274 (10%)
Query: 2   NGPSSAAPFKRLEGKVXXXXXXXXXXXXXXVELFHENGAKVVIA-DVQDKLGEDLA---D 57
           +GPS A+  K L GKV                     GA VV+      K  E++     
Sbjct: 10  SGPSDAS--KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELK 67
Query: 58  KLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLER 117
           KLG     I  DIS   EV+ L D AVS FG LD + +N+G+    +   L+  +   ++
Sbjct: 68  KLGAQGVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGM--EVWCDELEVTQELFDK 125
Query: 118 LINVNTIGGFL----GAKHAARVMVPQQKGCILFTASACTEIAGLGSPA-YTISKYGILG 172
           + N+NT G F     G KH  R       G I+ T+S    + G+ + A Y  SK  + G
Sbjct: 126 VFNLNTRGQFFVAQQGLKHCRR------GGRIILTSSIAAVMTGIPNHALYAGSKAAVEG 179
Query: 173 LVKCLAAELGQYGIRVNCVSPYGLATGMSMKG----------GVDPALIESSMSQMGNLK 222
             +  A + G  G+ VNC++P G+ T M  +           G+    I+  ++ M  LK
Sbjct: 180 FCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLK 239
Query: 223 GEFLKTDGIANAALYLASDESSYVSGQNLVVDGG 256
                 D I  A   L  +ES +++GQ + + GG
Sbjct: 240 RIGYPAD-IGRAVSALCQEESEWINGQVIKLTGG 272

>pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase Length = 226

Iteration: 1
 Score = 83.2 bits (204), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 64/247 (25%), Positives = 114/247 (46%), Gaps = 25/247 (10%)
Query: 13  LEGKVXXXXXXXXXXXXXXVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISN 72
            EGK+               E     GAKV+     +   + ++D LG +   +  ++++
Sbjct: 3   FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTD 62
Query: 73  EDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKH 132
              + ++++   ++FG++DI+ NNAGI   +   ++     +   +I  N    F  +K 
Sbjct: 63  PASIESVLEKIRAEFGEVDILVNNAGITRDNL--LMRMKDEEWNDIIETNLSSVFRLSKA 120
Query: 133 AARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVS 192
             R M+ ++ G I+            G   Y  +K G++G  K LA E+   GI VN V+
Sbjct: 121 VMRAMMKKRHGRIITIG---------GQANYAAAKAGLIGFSKSLAREVASRGITVNVVA 171
Query: 193 PYGLATGMSMKGGVDPALIESSMSQM--GNLKGEFLKTDGIANAALYLASDESSYVSGQN 250
           P  + T    + G+        ++Q+  G L G       IANA  +LASDE++Y++G+ 
Sbjct: 172 PGFIETSDDQRAGI--------LAQVPAGRLGG----AQEIANAVAFLASDEAAYITGET 219
Query: 251 LVVDGGF 257
           L V+GG 
Sbjct: 220 LHVNGGM 226

>pdb|2WDZ|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter Sphaeroides In Complex With Nad+ And 1,2-Pentandiol Length = 254

Iteration: 1
 Score = 82.4 bits (202), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 115/230 (50%), Gaps = 12/230 (5%)
Query: 35  FHENGAKVVIADVQDKLGEDLADKLGQDVC-YIHCDISNEDEVINLVDTAVSKFGKLDIM 93
           F  +GA++++ D +    +  A +LG  V   I  D+++ + +      A +    + I+
Sbjct: 31  FAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVA-PVSIL 89
Query: 94  YNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACT 153
            N+AGI        L+T  +   +++ VN  G F  ++   R MV +  G I+   S   
Sbjct: 90  VNSAGIA--RLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSG 147
Query: 154 EIAGLG--SPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALI 211
            I      + +Y  SK  +  L + LAAE    G+RVN ++P  +AT M++K    P L 
Sbjct: 148 TIVNRPQFASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRERPELF 207
Query: 212 ES--SMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSV 259
           E+   M+ MG   GE      IA AAL+LAS  +SYV+G  L VDGG++V
Sbjct: 208 ETWLDMTPMGRC-GE---PSEIAAAALFLASPAASYVTGAILAVDGGYTV 253

>pdb|2PH3|A Chain A, Crystal Structure Of 3-oxoacyl-[acyl Carrier Protein] Reductase Ttha0415 From Thermus Thermophilus Length = 245

Iteration: 1
 Score = 82.0 bits (201), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 94/196 (47%), Gaps = 6/196 (3%)
Query: 63  VCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVN 122
           V  +  ++   +    LV  A    G LD + NNAGI   +   ++     D E ++  N
Sbjct: 54  VAVLGANLLEAEAATALVHQAAEVLGGLDTLVNNAGITRDTL--LVRMKDEDWEAVLEAN 111
Query: 123 TIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELG 182
               F   + A ++M+  + G I+   S    +   G   Y  SK G++G  + +A E  
Sbjct: 112 LSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNPGQANYVASKAGLIGFTRAVAKEYA 171
Query: 183 QYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDE 242
           Q GI VN V+P  + T M+ +  +   + E+ + Q+    G F + + +A A  +L S++
Sbjct: 172 QRGITVNAVAPGFIETEMTER--LPQEVKEAYLKQIP--AGRFGRPEEVAEAVAFLVSEK 227
Query: 243 SSYVSGQNLVVDGGFS 258
           + Y++GQ L VDGG +
Sbjct: 228 AGYITGQTLCVDGGLT 243

>pdb|3OP4|A Chain A, Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio Cholerae O1 Biovar Eltor Str. N16961 In Complex With Nadp+ Length = 248

Iteration: 1
 Score = 82.0 bits (201), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 114/248 (45%), Gaps = 8/248 (3%)
Query: 10  FKRLEGKVXXXXXXXXXXXXXXVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCD 69
           F  LEGKV               EL  E GAKV+     +   + ++D LG +      +
Sbjct: 4   FXNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGXALN 63
Query: 70  ISNEDEVINLVDTAVSKFGKLDIMYNNAGIL-DRSFGSILDTPKSDLERLINVNTIGGFL 128
           ++N + +  ++     +FG +DI+ NNAGI  D       +   SD+    N+ +I  F 
Sbjct: 64  VTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLXRXKEEEWSDIXE-TNLTSI--FR 120
Query: 129 GAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRV 188
            +K   R    +++G I+   S        G   Y  +K G++G  K  A E+   G+ V
Sbjct: 121 LSKAVLRGXXKKRQGRIINVGSVVGTXGNAGQANYAAAKAGVIGFTKSXAREVASRGVTV 180
Query: 189 NCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSG 248
           N V+P  + T  +    ++     ++++Q+    G       IA+A  +LAS E++Y++G
Sbjct: 181 NTVAPGFIETDXTK--ALNDEQRTATLAQV--PAGRLGDPREIASAVAFLASPEAAYITG 236
Query: 249 QNLVVDGG 256
           + L V+GG
Sbjct: 237 ETLHVNGG 244

>pdb|3SX2|A Chain A, Crystal Structure Of A Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Paratuberculosis In Complex With Nad Length = 278

Iteration: 1
 Score = 81.6 bits (200), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 61/214 (28%), Positives = 100/214 (46%), Gaps = 17/214 (7%)
Query: 55  LADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSD 114
           L + +G  +     D+ + + +   +   + + G+LDI+  NAGI   S G         
Sbjct: 68  LVEDIGSRIVARQADVRDRESLSAALQAGLDELGRLDIVVANAGIAPMSAG------DDG 121
Query: 115 LERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSP-----AYTISKYG 169
              +I+VN  G +   K A   +V Q  G  +   S+   +AG+GS       Y  +K+G
Sbjct: 122 WHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVGYVAAKHG 181
Query: 170 ILGLVKCLAAELGQYGIRVNCVSPYGLATGM-----SMKGGVDPALIESSMSQMGN-LKG 223
           ++GL++  A  L    IRVN + P G+ T M     + +     A    +   MGN +  
Sbjct: 182 VVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAMPV 241
Query: 224 EFLKTDGIANAALYLASDESSYVSGQNLVVDGGF 257
           E L  + +ANA  +L SD++ Y++G  L VD GF
Sbjct: 242 EVLAPEDVANAVAWLVSDQARYITGVTLPVDAGF 275

>pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain Dehydrogenase Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 253

Iteration: 1
 Score = 81.6 bits (200), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 72/262 (27%), Positives = 116/262 (44%), Gaps = 22/262 (8%)
Query: 3   GPSSAAPFKRLEGKVXXXXXXXXXXXXXXVELFHENGAKVVIADVQDKLGEDLADKL--- 59
           GP S     R E KV               E     GA VV+AD+  +  E +A ++   
Sbjct: 1   GPGS----MRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVAD 56
Query: 60  GQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILD-RSFGSILDTPKSDLERL 118
           G     +  D+S+ +    + D  +++FG +D + NNA I        +L       ++ 
Sbjct: 57  GGTAISVAVDVSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKF 116
Query: 119 INVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLA 178
           ++VN  G     +   + M  +  G I+  +S     A L S  Y ++K GI GL + L+
Sbjct: 117 MSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTA---AWLYSNYYGLAKVGINGLTQQLS 173
Query: 179 AELGQYGIRVNCVSPYGLAT----GMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANA 234
            ELG   IR+N ++P  + T      + K  VD  +    +S+MG         D +   
Sbjct: 174 RELGGRNIRINAIAPGPIDTEANRTTTPKEMVDDIVKGLPLSRMGT-------PDDLVGM 226
Query: 235 ALYLASDESSYVSGQNLVVDGG 256
            L+L SDE+S+++GQ   VDGG
Sbjct: 227 CLFLLSDEASWITGQIFNVDGG 248

>pdb|2EW8|A Chain A, Crystal Structure Of The (s)-specific 1-phenylethanol Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1 Length = 249

Iteration: 1
 Score = 81.3 bits (199), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 70/254 (27%), Positives = 109/254 (42%), Gaps = 19/254 (7%)
Query: 11  KRLEGKVXXXXXXXXXXXXXXVELFHENGAKVVIAD-VQDKLGEDLADKLGQDVCYIHCD 69
           +RL+ K+               E F   GA + IAD V     E     LG+ V  + CD
Sbjct: 3   QRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCD 62
Query: 70  ISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLG 129
           +S   +V       +S FG+ DI+ NNAGI         +      ++   +N   GFL 
Sbjct: 63  VSQPGDVEAFGKQVISTFGRCDILVNNAGIY--PLIPFDELTFEQWKKTFEINVDSGFLM 120
Query: 130 AKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVN 189
           AK     M     G I+   S    +       Y  +K   +G  + LA++LG+ GI VN
Sbjct: 121 AKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGITVN 180
Query: 190 CVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTD-------GIANAALYLASDE 242
            ++P  + T  +           S++S M ++    L+          +  AA +LASD+
Sbjct: 181 AIAPSLVRTATTEA---------SALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLASDD 231
Query: 243 SSYVSGQNLVVDGG 256
           +S+++GQ L VDGG
Sbjct: 232 ASFITGQTLAVDGG 245

>pdb|2YZ7|A Chain A, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From Alcaligenes Faecalis Length = 260

Iteration: 1
 Score = 81.3 bits (199), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 61/215 (28%), Positives = 102/215 (47%), Gaps = 16/215 (7%)
Query: 55  LADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSD 114
           L  K G    Y++ D+S+     + +  A    G LDI+ NNAGI  +    I + P   
Sbjct: 49  LESKFGVKAYYLNADLSDAQATRDFIAKAAEALGGLDILVNNAGI--QHTAPIEEFPVDK 106
Query: 115 LERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLV 174
              +I +N    F G   A  +M  Q  G I+  ASA   +A +   AY  +K+G++GL 
Sbjct: 107 WNAIIALNLSAVFHGTAAALPIMQKQGWGRIINIASAHGLVASVNKSAYVAAKHGVVGLT 166
Query: 175 KCLAAELGQYGIRVNCVSPYGLAT--------GMSMKGGVDPALIESSMSQMGNLKG--- 223
           K  A E    GI  N + P  + T         +S + G+D   IE++  ++   K    
Sbjct: 167 KVTALENAGKGITCNAICPGWVRTPLVEKQIEAISQQKGID---IEAAARELLAEKQPSL 223
Query: 224 EFLKTDGIANAALYLASDESSYVSGQNLVVDGGFS 258
           +F+  + +  AA++L+S  +  ++G  L +DGG++
Sbjct: 224 QFVTPEQLGGAAVFLSSAAADQMTGTTLSLDGGWT 258

>pdb|1K2W|A Chain A, Crystal Structure Of Sorbitol Dehydrogenase From R. Sphaeroides Length = 256

Iteration: 1
 Score = 80.9 bits (198), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 108/255 (42%), Gaps = 14/255 (5%)
Query: 12  RLEGKVXXXXXXXXXXXXXXVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDIS 71
           RL+GK                E +   GA+V IAD+  +     A ++G   C I  D++
Sbjct: 2   RLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVT 61
Query: 72  NEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAK 131
           ++  +   V   + ++G +DI+ NNA + D     I++  +   +RL  +N  G     +
Sbjct: 62  DQASIDRCVAELLDRWGSIDILVNNAALFD--LAPIVEITRESYDRLFAINVSGTLFMMQ 119
Query: 132 HAARVMVPQQKGC-ILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNC 190
             AR M+   +G  I+  AS            Y  +K  ++ L +     L ++GI VN 
Sbjct: 120 AVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGINVNA 179
Query: 191 VSPYGLATGMSMKGGVDPALIESSMSQMGNLK---------GEFLKTDGIANAALYLASD 241
           ++P G+  G     GVD    +      G  K         G   + + +   A++LA+ 
Sbjct: 180 IAP-GVVDGEHWD-GVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGMAIFLATP 237
Query: 242 ESSYVSGQNLVVDGG 256
           E+ Y+  Q   VDGG
Sbjct: 238 EADYIVAQTYNVDGG 252

>pdb|2ZAT|A Chain A, Crystal Structure Of A Mammalian Reductase Length = 260

Iteration: 1
 Score = 80.1 bits (196), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 118/256 (46%), Gaps = 20/256 (7%)
Query: 11  KRLEGKVXXXXXXXXXXXXXXVELFHENGAKVVIADV-QDKLGEDLADKLGQ--DVCYIH 67
           K LE KV                   ++GA VV++   Q+ +   +A   G+   V    
Sbjct: 10  KPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTV 69
Query: 68  CDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGF 127
           C +   ++   LV  AV+  G +DI+ +NA + +  FG+I+D  +   +++++VN     
Sbjct: 70  CHVGKAEDRERLVAMAVNLHGGVDILVSNAAV-NPFFGNIIDATEEVWDKILHVNVKATV 128
Query: 128 LGAKHAARVMVPQQKGCILFTAS--ACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYG 185
           L  K     M  +  G +L  +S  A      LG   Y +SK  +LGL K LA EL    
Sbjct: 129 LMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGP--YNVSKTALLGLTKNLAVELAPRN 186
Query: 186 IRVNCVSPYGLATGMSMKGGVDPALIES-----SMSQMGNLKGEFLKTDGIANAALYLAS 240
           IRVNC++P  + T  S    +D A  E       + ++GN        +  A    +L S
Sbjct: 187 IRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGN-------PEDCAGIVSFLCS 239
Query: 241 DESSYVSGQNLVVDGG 256
           +++SY++G+ +VV GG
Sbjct: 240 EDASYITGETVVVGGG 255

>pdb|2NM0|A Chain A, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier Protein Reductase From Streptomyces Coelicolor A3(2) Length = 253

Iteration: 1
 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 91/197 (46%), Gaps = 16/197 (8%)
Query: 66  IHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIG 125
           + CDI++ ++V           G ++++  NAG+       ++   + D   ++  N  G
Sbjct: 64  VKCDITDTEQVEQAYKEIEETHGPVEVLIANAGVTKDQL--LMRMSEEDFTSVVETNLTG 121
Query: 126 GFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYG 185
            F   K A R M+  +KG ++  +S    +   G   Y  SK G++G  + LA ELG   
Sbjct: 122 TFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAGQANYAASKAGLVGFARSLARELGSRN 181
Query: 186 IRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLK-----GEFLKTDGIANAALYLAS 240
           I  N V+P  + T M+        L +    Q  N+      G + + + IA    +LAS
Sbjct: 182 ITFNVVAPGFVDTDMT------KVLTD---EQRANIVSQVPLGRYARPEEIAATVRFLAS 232
Query: 241 DESSYVSGQNLVVDGGF 257
           D++SY++G  + VDGG 
Sbjct: 233 DDASYITGAVIPVDGGL 249

>pdb|3NUG|A Chain A, Crystal Structure Of Wild Type Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 113/249 (45%), Gaps = 8/249 (3%)
Query: 11  KRLEGKVXXXXXXXXXXXXXXVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDI 70
           +RL GK                     +GA V+++D+  +  +  A  +G+    I  DI
Sbjct: 2   ERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADI 61
Query: 71  SNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGA 130
           S+   V  L     +  G +DI+ NNA I+   F +  D       ++I+VN  G F+  
Sbjct: 62  SDPGSVKALFAEIQALTGGIDILVNNASIV--PFVAWDDVDLDHWRKIIDVNLTGTFIVT 119
Query: 131 KHAARVMVPQQKGCILFTASACTEIAGLGS-PAYTISKYGILGLVKCLAAELGQYGIRVN 189
           +     M    K   + + ++ T  AG  +  AY  +K G++G  + LA ELG+Y I  N
Sbjct: 120 RAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRALATELGKYNITAN 179
Query: 190 CVSPYGLATGMSMKGGV-DPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSG 248
            V+P GL     +K    + A     M Q    KG+    + IA+   +LASD++ +++G
Sbjct: 180 AVTP-GLIESDGVKASPHNEAFGFVEMLQAMKGKGQ---PEHIADVVSFLASDDARWITG 235
Query: 249 QNLVVDGGF 257
           Q L VD G 
Sbjct: 236 QTLNVDAGM 244

>pdb|4EGF|A Chain A, Crystal Structure Of A L-Xylulose Reductase From Mycobacterium Smegmatis Length = 266

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 100/206 (48%), Gaps = 5/206 (2%)
Query: 55  LADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSD 114
           L ++ G DV  +  D++  D    L   A   FG LD++ NNAGI       ++DT    
Sbjct: 64  LGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFGGLDVLVNNAGISHPQ--PVVDTDPQL 121
Query: 115 LERLINVNTIGGFLGAKHAARVMVPQ-QKGCILFTASACTEIAGLGSPAYTISKYGILGL 173
            +  I VN     L A    + MV   + G I+  ASA          AY  SK G++  
Sbjct: 122 FDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCTSKAGLVMA 181
Query: 174 VKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIAN 233
            K LA ELG +GIR N V P  + T M  +   D A     ++++    G F     +++
Sbjct: 182 TKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIARIP--LGRFAVPHEVSD 239
Query: 234 AALYLASDESSYVSGQNLVVDGGFSV 259
           A ++LASD +S ++G ++ VDGG+++
Sbjct: 240 AVVWLASDAASMINGVDIPVDGGYTM 265

>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum Length = 285

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 99/190 (52%), Gaps = 6/190 (3%)
Query: 69  DISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFL 128
           D+S ++E+  +++  +++   +DI+ NNAGI   +    L     + E ++  N    F 
Sbjct: 101 DVSKKEEISEVINKILTEHKNVDILVNNAGITRDNL--FLRMKNDEWEDVLRTNLNSLFY 158
Query: 129 GAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRV 188
             +  ++ M+  + G I+  +S       +G   Y+ SK G++G  K LA EL    I V
Sbjct: 159 ITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELASRNITV 218
Query: 189 NCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSG 248
           N ++P  +++ M+ K  +   + ++ +S +    G     + +AN A +L+SD+S Y++G
Sbjct: 219 NAIAPGFISSDMTDK--ISEQIKKNIISNIP--AGRMGTPEEVANLACFLSSDKSGYING 274
Query: 249 QNLVVDGGFS 258
           +  V+DGG S
Sbjct: 275 RVFVIDGGLS 284

>pdb|1E3S|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh Length = 261

Iteration: 1
 Score = 79.0 bits (193), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 58/173 (33%), Positives = 89/173 (51%), Gaps = 10/173 (5%)
Query: 38  NGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNA 97
            GA  V+ DV +  GE  A KLG +  +   ++++E EV   +  A  KFG++D+  N A
Sbjct: 33  QGATAVLLDVPNSEGETEAKKLGGNCIFAPANVTSEKEVQAALTLAKEKFGRIDVAVNCA 92
Query: 98  GI--LDRSFGSILDTPKS--DLERLINVNTIGGFLGAKHAARVMVPQ------QKGCILF 147
           GI    +++    +   +  D +R+INVN IG F   +  A VM         Q+G I+ 
Sbjct: 93  GIAVAIKTYHEKKNQVHTLEDFQRVINVNLIGTFNVIRLVAGVMGQNEPDQGGQRGVIIN 152
Query: 148 TASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGM 200
           TAS       +G  AY+ SK GI+G+   +A +L   GIRV  ++P   AT +
Sbjct: 153 TASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVVTIAPGLFATPL 205

>pdb|1E3W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh And 3-Keto Butyrate Length = 261

Iteration: 1
 Score = 79.0 bits (193), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 58/173 (33%), Positives = 89/173 (51%), Gaps = 10/173 (5%)
Query: 38  NGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNA 97
            GA  V+ DV +  GE  A KLG +  +   ++++E EV   +  A  KFG++D+  N A
Sbjct: 33  QGATAVLLDVPNSEGETEAKKLGGNCIFAPANVTSEKEVQAALTLAKEKFGRIDVAVNCA 92
Query: 98  GI--LDRSFGSILDTPKS--DLERLINVNTIGGFLGAKHAARVMVPQ------QKGCILF 147
           GI    +++    +   +  D +R+INVN IG F   +  A VM         Q+G I+ 
Sbjct: 93  GIAVAIKTYHEKKNQVHTLEDFQRVINVNLIGTFNVIRLVAGVMGQNEPDQGGQRGVIIN 152
Query: 148 TASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGM 200
           TAS       +G  AY+ SK GI+G+   +A +L   GIRV  ++P   AT +
Sbjct: 153 TASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVVTIAPGLFATPL 205

>pdb|1E6W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh And Estradiol Length = 260

Iteration: 1
 Score = 78.6 bits (192), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 58/173 (33%), Positives = 89/173 (51%), Gaps = 10/173 (5%)
Query: 38  NGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNA 97
            GA  V+ DV +  GE  A KLG +  +   ++++E EV   +  A  KFG++D+  N A
Sbjct: 32  QGATAVLLDVPNSEGETEAKKLGGNCIFAPANVTSEKEVQAALTLAKEKFGRIDVAVNCA 91
Query: 98  GI--LDRSFGSILDTPKS--DLERLINVNTIGGFLGAKHAARVMVPQ------QKGCILF 147
           GI    +++    +   +  D +R+INVN IG F   +  A VM         Q+G I+ 
Sbjct: 92  GIAVAIKTYHEKKNQVHTLEDFQRVINVNLIGTFNVIRLVAGVMGQNEPDQGGQRGVIIN 151
Query: 148 TASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGM 200
           TAS       +G  AY+ SK GI+G+   +A +L   GIRV  ++P   AT +
Sbjct: 152 TASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVVTIAPGLFATPL 204

>pdb|3AK4|A Chain A, Crystal Structure Of Nadh-Dependent Quinuclidinone Reductase From Agrobacterium Tumefaciens Length = 263

Iteration: 1
 Score = 77.8 bits (190), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 59/227 (25%), Positives = 102/227 (44%), Gaps = 12/227 (5%)
Query: 39  GAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAG 98
           GA V IAD+     + +   L      +  D++    V   +  A+   G  D++  NAG
Sbjct: 36  GATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDLLCANAG 95
Query: 99  ILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAAR-VMVPQQKGCILFTASACTEIAG 157
           +   +    +D    + +   +VN  G FL  + A R  +    KG I+ TAS   ++  
Sbjct: 96  V--STMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGA 153
Query: 158 LGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMK--------GGVDPA 209
                Y+ SK+ + G  + LA E+    IRVNCV P  + T M  +         G+ P 
Sbjct: 154 PLLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPE 213
Query: 210 LIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGG 256
            + +    +  L G   + + +A+  ++LASD + +++GQ + V GG
Sbjct: 214 AVRAEYVSLTPL-GRIEEPEDVADVVVFLASDAARFMTGQGINVTGG 259

>pdb|1DOH|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And 4-nitro-inden-1-one Length = 283

Iteration: 1
 Score = 77.4 bits (189), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 71/269 (26%), Positives = 125/269 (46%), Gaps = 24/269 (8%)
Query: 3   GPSSAAPFKRLEGKVXXXXXXXXXXXXXXVELFHENGAKVVI--ADVQDKLGEDLA--DK 58
           GP SA+    LEGKV                     G KV++  A+  +   E +A   K
Sbjct: 21  GPQSAS----LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKK 76
Query: 59  LGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERL 118
            G D   +  ++   ++++ + + AV  FGKLDI+ +N+G++  SFG + D    + +R+
Sbjct: 77  NGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVV--SFGHVKDVTPEEFDRV 134
Query: 119 INVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPA-YTISKYGILGLVKCL 177
             +NT G F  A+ A + +  +  G ++   S   +   +   A Y+ SK  I    +C+
Sbjct: 135 FTINTRGQFFVAREAYKHL--EIGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCM 192
Query: 178 AAELGQYGIRVNCVSPYGLATGM----------SMKGGVDPALIESSMSQMGNLKGEFLK 227
           A ++    I VN V+P G+ T M          + +   +  + E +  Q   L+   L 
Sbjct: 193 AIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLP 252
Query: 228 TDGIANAALYLASDESSYVSGQNLVVDGG 256
            D IA    +LAS++  +V+G+ + +DGG
Sbjct: 253 ID-IARVVCFLASNDGGWVTGKVIGIDGG 280

>pdb|1YBV|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And An Active Site Inhibitor Length = 283

Iteration: 1
 Score = 77.4 bits (189), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 71/269 (26%), Positives = 125/269 (46%), Gaps = 24/269 (8%)
Query: 3   GPSSAAPFKRLEGKVXXXXXXXXXXXXXXVELFHENGAKVVI--ADVQDKLGEDLA--DK 58
           GP SA+    LEGKV                     G KV++  A+  +   E +A   K
Sbjct: 21  GPQSAS----LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKK 76
Query: 59  LGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERL 118
            G D   +  ++   ++++ + + AV  FGKLDI+ +N+G++  SFG + D    + +R+
Sbjct: 77  NGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVV--SFGHVKDVTPEEFDRV 134
Query: 119 INVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPA-YTISKYGILGLVKCL 177
             +NT G F  A+ A + +  +  G ++   S   +   +   A Y+ SK  I    +C+
Sbjct: 135 FTINTRGQFFVAREAYKHL--EIGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCM 192
Query: 178 AAELGQYGIRVNCVSPYGLATGM----------SMKGGVDPALIESSMSQMGNLKGEFLK 227
           A ++    I VN V+P G+ T M          + +   +  + E +  Q   L+   L 
Sbjct: 193 AIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLP 252
Query: 228 TDGIANAALYLASDESSYVSGQNLVVDGG 256
            D IA    +LAS++  +V+G+ + +DGG
Sbjct: 253 ID-IARVVCFLASNDGGWVTGKVIGIDGG 280

>pdb|2PD6|A Chain A, Structure Of Human Hydroxysteroid Dehydrogenase Type 8, Hsd17b8 Length = 264

Iteration: 1
 Score = 77.4 bits (189), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 100/194 (51%), Gaps = 8/194 (4%)
Query: 66  IHCDISNEDEVINLVDTAVSKFGKL-DIMYNNAGILDRSFGSILDTPKSDLERLINVNTI 124
              D+S       L++   + F +   ++ + AGI    F  +L   + D +++I VN  
Sbjct: 68  FQADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEF--LLHMSEDDWDKVIAVNLK 125
Query: 125 GGFLGAKHAARVMVPQQ-KGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQ 183
           G FL  + AA+ +V    +G I+  +S   ++  +G   Y  SK G++GL +  A ELG+
Sbjct: 126 GTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQTAARELGR 185
Query: 184 YGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDES 243
           +GIR N V P  +AT M+ K    P  +   +++M  + G     + +A+   +LAS++S
Sbjct: 186 HGIRCNSVLPGFIATPMTQK---VPQKVVDKITEMIPM-GHLGDPEDVADVVAFLASEDS 241
Query: 244 SYVSGQNLVVDGGF 257
            Y++G ++ V GG 
Sbjct: 242 GYITGTSVEVTGGL 255

>pdb|4G81|D Chain D, Crystal Structure Of A Hexonate Dehydrogenase Ortholog (Target Efi- 506402 From Salmonella Enterica, Unliganded Structure Length = 255

Iteration: 1
 Score = 77.4 bits (189), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 114/234 (48%), Gaps = 24/234 (10%)
Query: 39  GAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKFG----KLD 91
           GA+V++ D++  L  +  D L   G D   +  D+++E  +    + A SK       +D
Sbjct: 33  GARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAI----EAAFSKLDAEGIHVD 88
Query: 92  IMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASA 151
           I+ NNAGI  R    +++    + +++I+ N    FL ++ AA+ M+ +  G  +    +
Sbjct: 89  ILINNAGIQYRK--PMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGS 146
Query: 152 CTEIAGLGSPA-YTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPAL 210
            T  A   + A YT +K GI  L   +AAE  Q+ I+ N + P  + T M      + AL
Sbjct: 147 LTSQAARPTVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDM------NTAL 200
Query: 211 IE----SSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVV 260
           IE     S  +       + + + +   A++L+S  S Y++GQ + VDGG+  V
Sbjct: 201 IEDKQFDSWVKSSTPSQRWGRPEELIGTAIFLSSKASDYINGQIIYVDGGWLAV 254

>pdb|3O38|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 266

Iteration: 1
 Score = 77.4 bits (189), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 108/218 (49%), Gaps = 12/218 (5%)
Query: 38  NGAKVVIADVQDK-LGE---DLAD-KLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDI 92
            GA VVI+D  ++ LGE    LAD  LG+ V  + CD+++ + V  L+   V K G+LD+
Sbjct: 46  EGADVVISDYHERRLGETRDQLADLGLGR-VEAVVCDVTSTEAVDALITQTVEKAGRLDV 104
Query: 93  MYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMV-PQQKGCILFTASA 151
           + NNAG+  ++   ++D    + +R++NV         + A R        G I+  AS 
Sbjct: 105 LVNNAGLGGQT--PVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASV 162
Query: 152 CTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALI 211
               A      Y  +K G++ L +C A E  ++G+R+N VSP  +A    ++      L+
Sbjct: 163 LGWRAQHSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSP-SIARHKFLEKTSSSELL 221
Query: 212 ESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQ 249
           +   S      G   +   +A    +LASD SSY++G+
Sbjct: 222 DRLASD--EAFGRAAEPWEVAATIAFLASDYSSYMTGE 257

>pdb|1UZL|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 99/197 (50%), Gaps = 16/197 (8%)
Query: 66  IHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIG 125
           + CD+++ D V           G ++++ +NAG+   +F  ++   +   E++IN N  G
Sbjct: 58  VECDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAF--LMRMTEEKFEKVINANLTG 115
Query: 126 GFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPA-YTISKYGILGLVKCLAAELGQY 184
            F  A+ A+R M   + G ++F  S      G+G+ A Y  SK G++G+ + +A EL + 
Sbjct: 116 AFRVAQRASRSMQRNKFGRMIFIGSVSGSW-GIGNQANYAASKAGVIGMARSIARELSKA 174
Query: 185 GIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDG----IANAALYLAS 240
            +  N V+P  + T M+       AL E    Q G L+    K  G    +A    +LAS
Sbjct: 175 NVTANVVAPGYIDTDMTR------ALDER--IQQGALQFIPAKRVGTPAEVAGVVSFLAS 226
Query: 241 DESSYVSGQNLVVDGGF 257
           +++SY+SG  + VDGG 
Sbjct: 227 EDASYISGAVIPVDGGM 243

>pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From Caenorhabditis Elegans With Cofactor And Substrate Length = 297

Iteration: 1
 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 118/244 (48%), Gaps = 22/244 (9%)
Query: 34  LFHENGAKVVIADV-QDKLGEDL---------ADKLGQDVCYIHCDISNEDEVINLVDTA 83
           +F + GA+V I    +D+L E           A+K+   V  +  + S +D++IN   T 
Sbjct: 45  IFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADV-TEASGQDDIIN---TT 100
Query: 84  VSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKG 143
           ++KFGK+DI+ NNAG       +  D P    ++   +N     +      +  + + KG
Sbjct: 101 LAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLN-FQAVIEMTQKTKEHLIKTKG 159
Query: 144 CILFTASACT-EIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSM 202
            I+  +S      A  G P Y  +K  +    +C A +L Q+G+RVN VSP  +ATG   
Sbjct: 160 EIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMG 219
Query: 203 KGGVDPALIESSMSQMGNLK-----GEFLKTDGIANAALYLASDE-SSYVSGQNLVVDGG 256
             G+     +   S +G+ K     G   K + IAN  ++LA    SSY+ GQ++V DGG
Sbjct: 220 AMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGG 279
Query: 257 FSVV 260
            ++V
Sbjct: 280 STLV 283

>pdb|1PR9|A Chain A, Human L-Xylulose Reductase Holoenzyme Length = 244

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 112/230 (48%), Gaps = 16/230 (6%)
Query: 32  VELFHENGAKVV-IADVQDKLGEDLADKLG-QDVCYIHCDISNEDEVINLVDTAVSKFGK 89
           V+  H  GA+VV ++  Q  L   + +  G + VC    D+ + +      + A+   G 
Sbjct: 24  VQALHATGARVVAVSRTQADLDSLVRECPGIEPVCV---DLGDWEAT----ERALGSVGP 76
Query: 90  LDIMYNNAGI-LDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQ-QKGCILF 147
           +D++ NNA + L + F   L+  K   +R   VN       ++  AR ++ +   G I+ 
Sbjct: 77  VDLLVNNAAVALLQPF---LEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVN 133
Query: 148 TASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVD 207
            +S C++ A      Y  +K  +  L K +A ELG + IRVN V+P  + T M      D
Sbjct: 134 VSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSD 193
Query: 208 PALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGF 257
           P   ++ ++++    G+F + + + NA L+L SD S   +G  L V+GGF
Sbjct: 194 PHKAKTMLNRIP--LGKFAEVEHVVNAILFLLSDRSGMTTGSTLPVEGGF 241

>pdb|3NDR|A Chain A, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 110/254 (43%), Gaps = 20/254 (7%)
Query: 11  KRLEGKVXXXXXXXXXXXXXXVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDI 70
           +RL GK                     +GA V+++D+  +  +  A  +G+    I  DI
Sbjct: 2   ERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADI 61
Query: 71  SNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGA 130
           S+   V  L     +  G +DI+ NNA I+   F +  D       ++I+VN  G F+  
Sbjct: 62  SDPGSVKALFAEIQALTGGIDILVNNASIV--PFVAWDDVDLDHWRKIIDVNLTGTFIVT 119
Query: 131 KHAARVMVPQQKGCILFTASACTEIAGL-GSPAYTISKYGILGLVKCLAAELGQYGIRVN 189
           +          K   + + ++ T  AG     AY  +K G++G  + LA ELG+Y I  N
Sbjct: 120 RAGTDQXRAAGKAGRVISIASNTFFAGTPNXAAYVAAKGGVIGFTRALATELGKYNITAN 179
Query: 190 CVSPYGLATGMSMKGGVDPA-------LIESSMSQMGNLKGEFLKTDGIANAALYLASDE 242
            V+P     G+    GV  +        +E   +  G  + E      IA+   +LASD+
Sbjct: 180 AVTP-----GLIESDGVKASPHNEAFGFVEXLQAXKGKGQPEH-----IADVVSFLASDD 229
Query: 243 SSYVSGQNLVVDGG 256
           + +++GQ L VD G
Sbjct: 230 ARWITGQTLNVDAG 243

>pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Reveals The Structure Bases Of Its Catalytic Mechanism And High Substrate Selectivity Length = 263

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/242 (27%), Positives = 111/242 (45%), Gaps = 24/242 (9%)
Query: 33  ELFHENGAKVVIADVQ-DKLGE---DLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFG 88
           E F + GA +V+   Q D+L E    L +K G  V  +  D++  + V  +V++  S FG
Sbjct: 25  EGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFG 84
Query: 89  KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQK----GC 144
             DI+ NNAG    S  +I++      +    ++     + A   AR +VP  +    G 
Sbjct: 85  GADILVNNAGT--GSNETIMEAADEKWQFYWELHV----MAAVRLARGLVPGMRARGGGA 138
Query: 145 ILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMK- 203
           I+  AS C        P Y ++K  ++   K LA E+ +  IRVNC++P  + T   +K 
Sbjct: 139 IIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKT 198
Query: 204 --------GGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDG 255
                   GG     ++S   +   +K  F   + +AN  ++L S+ ++Y  G    VDG
Sbjct: 199 AKELTKDNGGDWKGYLQSVADEHAPIK-RFASPEELANFFVFLCSERATYSVGSAYFVDG 257
Query: 256 GF 257
           G 
Sbjct: 258 GM 259

>pdb|2NTN|A Chain A, Crystal Structure Of Maba-c60v/g139a/s144l Length = 267

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 101/197 (51%), Gaps = 16/197 (8%)
Query: 66  IHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIG 125
           +  D+++ D V           G ++++ +NAG+   +F  ++   +   E++IN N  G
Sbjct: 78  VEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAF--LMRMTEEKFEKVINANLTG 135
Query: 126 GFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPA-YTISKYGILGLVKCLAAELGQY 184
            F  A+ A+R M   + G ++F AS  + + G+G+ A Y  SK G++G+ + +A EL + 
Sbjct: 136 AFRVAQRASRSMQRNKFGRMIFIAS-VSGLWGIGNQANYAASKAGVIGMARSIARELSKA 194
Query: 185 GIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDG----IANAALYLAS 240
            +  N V+P  + T M+       AL E    Q G L+    K  G    +A    +LAS
Sbjct: 195 NVTANVVAPGYIDTDMTR------ALDER--IQQGALQFIPAKRVGTPAEVAGVVSFLAS 246
Query: 241 DESSYVSGQNLVVDGGF 257
           +++SY+SG  + VDGG 
Sbjct: 247 EDASYISGAVIPVDGGM 263

>pdb|4ESO|A Chain A, Crystal Structure Of A Putative Oxidoreductase Protein From Sinorhizobium Meliloti 1021 In Complex With Nadp Length = 255

Iteration: 1
 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 106/228 (46%), Gaps = 17/228 (7%)
Query: 37  ENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNN 96
           E GA+V++    +     + ++ G  V  +  DI++ +E+  L   A    G +D+++ N
Sbjct: 30  EGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDLLHIN 89
Query: 97  AGILD-RSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEI 155
           AG+ +   F  +    ++  +R   VNT G F   +    ++  ++ G I+FT+S   E 
Sbjct: 90  AGVSELEPFDQV---SEASYDRQFAVNTKGAFFTVQRLTPLI--REGGSIVFTSSVADEG 144
Query: 156 AGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSM 215
              G   Y+ SK  ++     LAAEL   GIRVN VSP  + T      G+     E+  
Sbjct: 145 GHPGXSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGI----TEAER 200
Query: 216 SQMGNLKGEFL------KTDGIANAALYLASDESSYVSGQNLVVDGGF 257
           ++   L             D +A A L+LA  E+++ +G  L VDGG 
Sbjct: 201 AEFKTLGDNITPXKRNGTADEVARAVLFLAF-EATFTTGAKLAVDGGL 247

>pdb|3VC7|A Chain A, Crystal Structure Of A Putative Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 254

Iteration: 1
 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 106/228 (46%), Gaps = 17/228 (7%)
Query: 37  ENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNN 96
           E GA+V++    +     + ++ G  V  +  DI++ +E+  L   A    G +D+++ N
Sbjct: 29  EGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDLLHIN 88
Query: 97  AGILD-RSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEI 155
           AG+ +   F  +    ++  +R   VNT G F   +    ++  ++ G I+FT+S   E 
Sbjct: 89  AGVSELEPFDQV---SEASYDRQFAVNTKGAFFTVQRLTPLI--REGGSIVFTSSVADEG 143
Query: 156 AGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSM 215
              G   Y+ SK  ++     LAAEL   GIRVN VSP  + T      G+     E+  
Sbjct: 144 GHPGXSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGI----TEAER 199
Query: 216 SQMGNLKGEFL------KTDGIANAALYLASDESSYVSGQNLVVDGGF 257
           ++   L             D +A A L+LA  E+++ +G  L VDGG 
Sbjct: 200 AEFKTLGDNITPXKRNGTADEVARAVLFLAF-EATFTTGAKLAVDGGL 246

>pdb|3TSC|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Map_2410 From Mycobacterium Paratuberculosis Bound To Nad Length = 277

Iteration: 1
 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 79/280 (28%), Positives = 124/280 (44%), Gaps = 33/280 (11%)
Query: 3   GPSSAAPFKRLEGKVXXXXXXXXXXXXXXVELFHENGAKVVIADVQDKLGE----DLA-- 56
           GP S A   +LEG+V                     GA ++  D+  KL      D A  
Sbjct: 1   GPGSMA--GKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASP 58
Query: 57  DKLGQDVCYIHC----------DISNEDEVINLVDTAVSKFGKLDIMYNNAGIL-DRSFG 105
           D L + V  +            D  + D +  +VD  V+  G+LDI+  NAG+   +++ 
Sbjct: 59  DDLSETVRLVEAANRRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWD 118
Query: 106 SILDTPKSDLERLINVNTIGGFLGAKH-AARVMVPQQKGCILFTASACTEIAGLGSPAYT 164
            I  TP+ D   ++++N  G +      A R++   + G I+  +SA           YT
Sbjct: 119 DI--TPE-DFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPFMIHYT 175
Query: 165 ISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGM---SMKGGVDPALIESSMSQMGNL 221
            SK+ + GL +  AAELG++ IRVN V P  + T M    M   V  A+   +  Q+ ++
Sbjct: 176 ASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAM--ETNPQLSHV 233
Query: 222 KGEFL-----KTDGIANAALYLASDESSYVSGQNLVVDGG 256
              FL     + + IA+   +LASDES  V+   + VD G
Sbjct: 234 LTPFLPDWVAEPEDIADTVCWLASDESRKVTAAQIPVDQG 273

>pdb|3IMF|A Chain A, 1.99 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' Length = 257

Iteration: 1
 Score = 75.1 bits (183), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 109/236 (46%), Gaps = 26/236 (11%)
Query: 35  FHENGAKVVIA-DVQDKLGE---DLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKL 90
           F + GA+VVI    ++KL E   ++    GQ +  +  D+ N D++   ++    KFG++
Sbjct: 26  FAKEGARVVITGRTKEKLEEAKLEIEQFPGQ-ILTVQXDVRNTDDIQKXIEQIDEKFGRI 84
Query: 91  DIMYNNAGILDRSFGSILDTPKSDLE-----RLINVNTIGGFLGAKHAARVMVPQQ-KGC 144
           DI+ NNA       G+ +  P  DL       +IN+   G F  ++   +  + +  KG 
Sbjct: 85  DILINNAA------GNFI-CPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGN 137
Query: 145 ILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQ-YGIRVNCVSPYGLATGMSMK 203
           I+   +     AG G      +K G+L   K LA E G+ YGIRVN ++P      +   
Sbjct: 138 IINXVATYAWDAGPGVIHSAAAKAGVLAXTKTLAVEWGRKYGIRVNAIAP----GPIERT 193
Query: 204 GGVDPALIESSMSQMGNLK---GEFLKTDGIANAALYLASDESSYVSGQNLVVDGG 256
           GG D   I    ++        G     + IA  A YL SDE++Y++G     DGG
Sbjct: 194 GGADKLWISEEXAKRTIQSVPLGRLGTPEEIAGLAYYLCSDEAAYINGTCXTXDGG 249

>pdb|3TJR|A Chain A, Crystal Structure Of A Rv0851c Ortholog Short Chain Dehydrogenase From Mycobacterium Paratuberculosis Length = 301

Iteration: 1
 Score = 75.1 bits (183), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 83/167 (49%), Gaps = 14/167 (8%)
Query: 35  FHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKFGKLD 91
           F   GA++V++DV     E   + L   G D   + CD+ + DE++ L D A    G +D
Sbjct: 51  FARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGGVD 110
Query: 92  IMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQ-----QKGCIL 146
           ++++NAGI+    G +      D   +I+++      G+ HA    +P+       G I 
Sbjct: 111 VVFSNAGIV--VAGPLAQMNHDDWRWVIDID----LWGSIHAVEAFLPRLLEQGTGGHIA 164
Query: 147 FTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSP 193
           FTAS    +   G   Y ++KYG++GL + LA E+   GI V+ + P
Sbjct: 165 FTASFAGLVPNAGLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCP 211

>pdb|4HP8|A Chain A, Crystal Structure Of A Putative 2-Deoxy-D-Gluconate 3-Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506435) With Bound Nadp Length = 247

Iteration: 1
 Score = 74.7 bits (182), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 92/169 (54%), Gaps = 5/169 (2%)
Query: 90  LDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQ-QKGCILFT 148
            DI+ NNAGI+ R+    ++  + D + +++VN    F   +  A+ ++ + + G ++  
Sbjct: 80  FDILVNNAGIIRRA--DSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNI 137
Query: 149 ASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDP 208
           AS  +   G+  P+YT +K+G+ GL K LA E    GI VN ++P  + T  +     D 
Sbjct: 138 ASLLSFQGGIRVPSYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRADA 197
Query: 209 ALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGF 257
           A  ++ + ++    G +  ++ IA AA++L+S  + YV G  L VDGG+
Sbjct: 198 ARNKAILERIP--AGRWGHSEDIAGAAVFLSSAAADYVHGAILNVDGGW 244

>pdb|1UZM|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 74.7 bits (182), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 57/197 (28%), Positives = 100/197 (50%), Gaps = 16/197 (8%)
Query: 66  IHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIG 125
           +  D+++ D V           G ++++ +NAG+   +F  ++   +   E++IN N  G
Sbjct: 58  VEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAF--LMRMTEEKFEKVINANLTG 115
Query: 126 GFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPA-YTISKYGILGLVKCLAAELGQY 184
            F  A+ A+R M   + G ++F  S  + + G+G+ A Y  SK G++G+ + +A EL + 
Sbjct: 116 AFRVAQRASRSMQRNKFGRMIFIGS-VSGLWGIGNQANYAASKAGVIGMARSIARELSKA 174
Query: 185 GIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDG----IANAALYLAS 240
            +  N V+P  + T M+       AL E    Q G L+    K  G    +A    +LAS
Sbjct: 175 NVTANVVAPGYIDTDMTR------ALDER--IQQGALQFIPAKRVGTPAEVAGVVSFLAS 226
Query: 241 DESSYVSGQNLVVDGGF 257
           +++SY+SG  + VDGG 
Sbjct: 227 EDASYISGAVIPVDGGM 243

>pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Length = 263

Iteration: 1
 Score = 74.3 bits (181), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 67/242 (27%), Positives = 110/242 (45%), Gaps = 24/242 (9%)
Query: 33  ELFHENGAKVVIADVQ-DKLGE---DLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFG 88
           E F + GA +V+   Q D+L E    L +K G  V  +  D++  + V  +V++  S FG
Sbjct: 25  EGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFG 84
Query: 89  KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQK----GC 144
             DI+ NNAG    S  +I++      +    +      + A   AR +VP  +    G 
Sbjct: 85  GADILVNNAGT--GSNETIMEAADEKWQFYWELLV----MAAVRLARGLVPGMRARGGGA 138
Query: 145 ILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMK- 203
           I+  AS C        P Y ++K  ++   K LA E+ +  IRVNC++P  + T   +K 
Sbjct: 139 IIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKT 198
Query: 204 --------GGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDG 255
                   GG     ++S   +   +K  F   + +AN  ++L S+ ++Y  G    VDG
Sbjct: 199 AKELTKDNGGDWKGYLQSVADEHAPIK-RFASPEELANFFVFLCSERATYSVGSAYFVDG 257
Query: 256 GF 257
           G 
Sbjct: 258 GM 259

>pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Burkholderia Pseudomallei At 2.05 A Resolution Length = 270

Iteration: 1
 Score = 74.3 bits (181), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 95/189 (50%), Gaps = 6/189 (3%)
Query: 69  DISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFL 128
           ++++   V  LV++ + +FG L+++ NNAGI        +     + + +I+ N    F 
Sbjct: 85  NVNDATAVDALVESTLKEFGALNVLVNNAGITQDQLA--MRMKDDEWDAVIDTNLKAVFR 142
Query: 129 GAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRV 188
            ++   R M+  + G I+   S        G   Y  +K G+ G+ + LA E+G  GI V
Sbjct: 143 LSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAAAKAGVAGMTRALAREIGSRGITV 202
Query: 189 NCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSG 248
           NCV+P  + T M+ KG   P   ++++     L G     + IA+A  +LAS ++ Y++G
Sbjct: 203 NCVAPGFIDTDMT-KG--LPQEQQTALKTQIPL-GRLGSPEDIAHAVAFLASPQAGYITG 258
Query: 249 QNLVVDGGF 257
             L V+GG 
Sbjct: 259 TTLHVNGGM 267

>pdb|1ZBQ|A Chain A, Crystal Structure Of Human 17-beta-hydroxysteroid Dehydrogenase Type 4 In Complex With Nad Length = 327

Iteration: 1
 Score = 74.3 bits (181), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 58/173 (33%), Positives = 85/173 (49%), Gaps = 21/173 (12%)
Query: 35  FHENGAKVVIADV-------------QDKLGEDLADKLGQDVCYIHCDISNEDEVINLVD 81
           F E GA VV+ D+              DK+ E++  + G+ V   + D   E E   +V 
Sbjct: 50  FAERGALVVVNDLGGDFKGVGKGSLAADKVVEEIRRRGGKAVA--NYDSVEEGE--KVVK 105
Query: 82  TAVSKFGKLDIMYNNAGIL-DRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQ 140
           TA+  FG++D++ NNAGIL DRSF  I D    D + +  V+  G F   + A   M  Q
Sbjct: 106 TALDAFGRIDVVVNNAGILRDRSFARISD---EDWDIIHRVHLRGSFQVTRAAWEHMKKQ 162
Query: 141 QKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSP 193
           + G I+ T+SA       G   Y+ +K G+LGL   LA E  +  I  N ++P
Sbjct: 163 KYGRIIMTSSASGIYGNFGQANYSAAKLGLLGLANSLAIEGRKSNIHCNTIAP 215

>pdb|3A28|C Chain C, Crystal Structure Of L-2,3-Butanediol Dehydrogenase Length = 258

Iteration: 1
 Score = 73.9 bits (180), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 66/246 (26%), Positives = 117/246 (47%), Gaps = 33/246 (13%)
Query: 33  ELFHENGAKVVIADV---QDKLGE--DLADKLGQDVCYIHCDISNEDEVINLVDTAVSKF 87
           E    +G  + +AD+   +++  E   L +   Q   ++  D++++    + +D A  K 
Sbjct: 20  EKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKL 79
Query: 88  GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILF 147
           G  D++ NNAGI       +L+  + DL+++ +VN    F G + A+R     + G    
Sbjct: 80  GGFDVLVNNAGI--AQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKF--DELGVKGK 135
Query: 148 TASACTEIAGLGSP---AYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKG 204
             +A +  A  G P   AY+ +K+ + GL +  A EL   G  VN  +P  + TGM  + 
Sbjct: 136 IINAASIAAIQGFPILSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQ- 194
Query: 205 GVDPALIESSMSQM-GNLKGEFLKT-------------DGIANAALYLASDESSYVSGQN 250
                 I++ +S++ G   GE  K              + +A    +LAS+ S+YV+GQ 
Sbjct: 195 ------IDAELSKINGKPIGENFKEYSSSIALGRPSVPEDVAGLVSFLASENSNYVTGQV 248
Query: 251 LVVDGG 256
           ++VDGG
Sbjct: 249 MLVDGG 254

>pdb|1SPX|A Chain A, Crystal Structure Of Glucose Dehydrogenase Of Caenorhabditis Elegans In The Apo-Form Length = 278

Iteration: 1
 Score = 73.9 bits (180), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 72/242 (29%), Positives = 112/242 (46%), Gaps = 16/242 (6%)
Query: 34  LFHENGAKVVIADVQDKLGEDLADKL------GQDVCYIHCDISNEDEVINLVDTAVSKF 87
           LF   GAKV I     +  E+   ++       Q+V  +  D++ +     ++ T + KF
Sbjct: 25  LFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF 84
Query: 88  GKLDIMYNNAGILDRSFGSILDTPKS--DLERLINVNTIGGFLGAKHAARVMVPQQKGCI 145
           GKLDI+ NNAG       S   T +S    +  +N+N +   +     A   +   KG I
Sbjct: 85  GKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLN-LRSVIALTKKAVPHLSSTKGEI 143
Query: 146 LFTASACTEI-AGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKG 204
           +  +S  + + A    P Y+I+K  I    +  A +L Q+GIRVN +SP  +ATG     
Sbjct: 144 VNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAM 203
Query: 205 GVDPALIESSMSQMGNLK-----GEFLKTDGIANAALYLASDE-SSYVSGQNLVVDGGFS 258
           G+     +   S M  +K     G   +   IA    +LA  + SSY+ G  LVVDGG S
Sbjct: 204 GMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSS 263
Query: 259 VV 260
           ++
Sbjct: 264 LI 265

>pdb|1U7T|A Chain A, Crystal Structure Of AbadHSD10 WITH A BOUND INHIBITOR Length = 261

Iteration: 1
 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/166 (31%), Positives = 84/166 (50%), Gaps = 10/166 (6%)
Query: 38  NGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNA 97
            GA  V+ D+ +  GE  A KLG +  +   D+++E +V   +  A  KFG++D+  N A
Sbjct: 33  QGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCA 92
Query: 98  GILDRSFGSILDTPKS----DLERLINVNTIGGFLGAKHAARVMVPQ------QKGCILF 147
           GI   S    L   ++    D +R+++VN +G F   +  A  M         Q+G I+ 
Sbjct: 93  GIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIIN 152
Query: 148 TASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSP 193
           TAS       +G  AY+ SK GI+G+   +A +L   GIRV  ++P
Sbjct: 153 TASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAP 198

>pdb|3QLJ|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Avium Length = 322

Iteration: 1
 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/245 (26%), Positives = 114/245 (46%), Gaps = 37/245 (15%)
Query: 35  FHENGAKVVIADVQDKL----------GEDLADKL---GQDVCYIHCDISNEDEVINLVD 81
           F   GA+VV+ D+   L           + + D++   G +      ++++ D+   L+ 
Sbjct: 47  FAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGLIQ 106
Query: 82  TAVSKFGKLDIMYNNAGIL-DRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQ 140
           TAV  FG LD++ NNAGI+ DR    I +T + + + +I V+  G F   +HAA      
Sbjct: 107 TAVETFGGLDVLVNNAGIVRDRM---IANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGL 163
Query: 141 QK------GCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPY 194
            K      G I+ T+S       +G   Y+ +K GI  L    AAE+G+YG+ VN ++P 
Sbjct: 164 SKAGKAVDGRIINTSSGAGLQGSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS 223
Query: 195 GLATGMSMKGGVDPALIESSMSQMGNLKGE---FLKTDGIANAALYLASDESSYVSGQNL 251
                          + E+  ++M   + +    +  + ++   ++L S E+  V+G+  
Sbjct: 224 ARTR-----------MTETVFAEMMATQDQDFDAMAPENVSPLVVWLGSAEARDVTGKVF 272
Query: 252 VVDGG 256
            V+GG
Sbjct: 273 EVEGG 277

>pdb|1SO8|A Chain A, Abeta-bound Human Abad Structure [also Known As 3-hydroxyacyl-coa Dehydrogenase Type Ii (type Ii Hadh), Endoplasmic Reticulum- Associated Amyloid Beta-peptide Binding Protein (erab)] Length = 261

Iteration: 1
 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/166 (31%), Positives = 84/166 (50%), Gaps = 10/166 (6%)
Query: 38  NGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNA 97
            GA  V+ D+ +  GE  A KLG +  +   D+++E +V   +  A  KFG++D+  N A
Sbjct: 33  QGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCA 92
Query: 98  GILDRSFGSILDTPKS----DLERLINVNTIGGFLGAKHAARVMVPQ------QKGCILF 147
           GI   S    L   ++    D +R+++VN +G F   +  A  M         Q+G I+ 
Sbjct: 93  GIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIIN 152
Query: 148 TASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSP 193
           TAS       +G  AY+ SK GI+G+   +A +L   GIRV  ++P
Sbjct: 153 TASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAP 198

>pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase Or Reductase From Mycobacterium Abscessus Length = 293

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 105/231 (45%), Gaps = 17/231 (7%)
Query: 34  LFHENGAKVVIADVQDKLGEDLADKLGQ----DVCYIHCDISNEDEVINLVDTAVSKFGK 89
           +F   GA V +A    +    +  +LG+    +V  +  D+S+     +   T V  FG 
Sbjct: 60  VFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGA 119
Query: 90  LDIMYNNAGILDRSFGSILDT-PKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFT 148
           LD++  NAGI   +    LDT     L  +++VN  G     +     +    +G ++ T
Sbjct: 120 LDVVCANAGIFPEAR---LDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILT 176
Query: 149 ASACTEIAGL-GSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVD 207
           +S    + G  G   Y  SK   LG ++  A EL   G+ VN + P  + T    +G VD
Sbjct: 177 SSITGPVTGYPGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILT----EGLVD 232
Query: 208 PALIESSMSQMGN--LKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGG 256
             + E  +S M      G       I + A +LA+DE+ Y++GQ +VVDGG
Sbjct: 233 --MGEEYISGMARSIPMGMLGSPVDIGHLAAFLATDEAGYITGQAIVVDGG 281

>pdb|2O23|A Chain A, The Structure Of Wild-Type Human Hadh2 (17beta-Hydroxysteroid Dehydrogenase Type 10) Bound To Nad+ At 1.2 A Length = 265

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/166 (31%), Positives = 84/166 (50%), Gaps = 10/166 (6%)
Query: 38  NGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNA 97
            GA  V+ D+ +  GE  A KLG +  +   D+++E +V   +  A  KFG++D+  N A
Sbjct: 35  QGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCA 94
Query: 98  GILDRSFGSILDTPKS----DLERLINVNTIGGFLGAKHAARVMVPQ------QKGCILF 147
           GI   S    L   ++    D +R+++VN +G F   +  A  M         Q+G I+ 
Sbjct: 95  GIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIIN 154
Query: 148 TASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSP 193
           TAS       +G  AY+ SK GI+G+   +A +L   GIRV  ++P
Sbjct: 155 TASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAP 200

>pdb|3GDF|A Chain A, Crystal Structure Of The Nadp-Dependent Mannitol Dehydrogenase From Cladosporium Herbarum. Length = 267

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 91/198 (45%), Gaps = 17/198 (8%)
Query: 68  CDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGF 127
           C + + +    LV   V+ FG++D    NAG    S   ILD        ++ V+  G F
Sbjct: 80  CQVDSYESCEKLVKDVVADFGQIDAFIANAGATADS--GILDGSVEAWNHVVQVDLNGTF 137
Query: 128 LGAKHAARVMVPQQKGCILFTASACTEIAGL--GSPAYTISKYGILGLVKCLAAELGQYG 185
             AK        +  G ++ TAS    IA       +Y ++K G + + + LA E   + 
Sbjct: 138 HCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQTSYNVAKAGCIHMARSLANEWRDFA 197
Query: 186 IRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIAN----AALYLASD 241
            RVN +SP  + TG+S     +   +  SM  MG         DG+A     A +Y ASD
Sbjct: 198 -RVNSISPGYIDTGLSDFVPKETQQLWHSMIPMGR--------DGLAKELKGAYVYFASD 248
Query: 242 ESSYVSGQNLVVDGGFSV 259
            S+Y +G +L++DGG++ 
Sbjct: 249 ASTYTTGADLLIDGGYTT 266

>pdb|3SVT|A Chain A, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Ulcerans Length = 281

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/199 (30%), Positives = 93/199 (46%), Gaps = 7/199 (3%)
Query: 60  GQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLI 119
           G  + Y   DI+NEDE    VD   +  G+L  + + AG    + G I         R +
Sbjct: 62  GGAIRYEPTDITNEDETARAVDAVTAWHGRLHGVVHCAG-GSENIGPITQVDSEAWRRTV 120
Query: 120 NVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAA 179
           ++N  G     KHAAR MV    G  +  +S           AY ++K  +  L++  A 
Sbjct: 121 DLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMQLAAD 180
Query: 180 ELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNL--KGEFLKTDGIANAALY 237
           ELG   +RVN + P GL     +    + A + S  +    L  +GE    + +AN A++
Sbjct: 181 ELGASWVRVNSIRP-GLIRTDLVAAITESAELSSDYAMCTPLPRQGE---VEDVANMAMF 236
Query: 238 LASDESSYVSGQNLVVDGG 256
           L SD +S+V+GQ + VDGG
Sbjct: 237 LLSDAASFVTGQVINVDGG 255

>pdb|3PPI|A Chain A, Crystal Structure Of 3-Hydroxyacyl-Coa Dehydrogenase Type-2 From Mycobacterium Avium Length = 281

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/271 (25%), Positives = 124/271 (45%), Gaps = 30/271 (11%)
Query: 2   NGPSSAAPFKRLEGKVXXXXXXXXXXXXXXVELFHENGAKVVIADVQDKLGEDLADKLGQ 61
            GP S    K+ EG                V   H +G  VVIAD+  + G+ LAD+LG 
Sbjct: 17  QGPGSMVTIKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGN 76
Query: 62  DVCYIHCDISNEDEVINLVDTAVSKFGKLD---IMYNNAGILDRSFGSILDTPKSDLERL 118
              ++  ++++ED V+  ++ A ++ G+L    + +   G+  R    I+    S  +  
Sbjct: 77  RAEFVSTNVTSEDSVLAAIE-AANQLGRLRYAVVAHGGFGVAQR----IVQRDGSPADMG 131
Query: 119 INVNTIGGFL-GAKHAARVMV-------PQQ---KGCILFTASACTEIAGLGSPAYTISK 167
               TI  +L G  + AR++        P++   +G ++ TAS       +G  AY  +K
Sbjct: 132 GFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQTAYAAAK 191
Query: 168 YGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGN---LKGE 224
            G++GL    A +L   GIRVN ++P       +MK  +  ++ E ++++          
Sbjct: 192 AGVIGLTIAAARDLSSAGIRVNTIAPG------TMKTPIMESVGEEALAKFAANIPFPKR 245
Query: 225 FLKTDGIANAALYLASDESSYVSGQNLVVDG 255
               D  A+AA +L ++   Y++G+ + +DG
Sbjct: 246 LGTPDEFADAAAFLLTN--GYINGEVMRLDG 274

>pdb|3UN1|A Chain A, Crystal Structure Of An Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 260

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/198 (27%), Positives = 102/198 (51%), Gaps = 15/198 (7%)
Query: 62  DVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGI-LDRSFGSILDTPKSDLERLIN 120
           D+  +  DIS  +    +V   + +FG++D + NNAG+ L + F   ++  + D +  + 
Sbjct: 69  DIHTVAGDISKPETADRIVREGIERFGRIDSLVNNAGVFLAKPF---VEXTQEDYDHNLG 125
Query: 121 VNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPA--YTISKYGILGLVKCLA 178
           VN  G F   + AA   + Q  G I+   ++  +   +G P+   +++K G+  + + LA
Sbjct: 126 VNVAGFFHITQRAAAEXLKQGSGHIVSITTSLVDQPXVGXPSALASLTKGGLNAVTRSLA 185
Query: 179 AELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYL 238
            E  + G+RVN VSP G+     +K    PA   S+++ +  + G   +   + +A LYL
Sbjct: 186 XEFSRSGVRVNAVSP-GV-----IKTPXHPAETHSTLAGLHPV-GRXGEIRDVVDAVLYL 238
Query: 239 ASDESSYVSGQNLVVDGG 256
             + + +++G+ L VDGG
Sbjct: 239 --EHAGFITGEILHVDGG 254

>pdb|3D3W|A Chain A, Structure Of L-Xylulose Reductase With Bound Coenzyme, Phosphate And Hydroxide Length = 244

Iteration: 1
 Score = 72.4 bits (176), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 111/230 (48%), Gaps = 16/230 (6%)
Query: 32  VELFHENGAKVV-IADVQDKLGEDLADKLG-QDVCYIHCDISNEDEVINLVDTAVSKFGK 89
           V+  H  GA+VV ++  Q  L   + +  G + VC    D+ + +      + A+   G 
Sbjct: 24  VQALHATGARVVAVSRTQADLDSLVRECPGIEPVCV---DLGDWEAT----ERALGSVGP 76
Query: 90  LDIMYNNAGI-LDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQ-QKGCILF 147
           +D++ NNA + L + F   L+  K   +R   VN       ++  AR ++ +   G I+ 
Sbjct: 77  VDLLVNNAAVALLQPF---LEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVN 133
Query: 148 TASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVD 207
            +S  ++ A      Y  +K  +  L K +A ELG + IRVN V+P  + T M      D
Sbjct: 134 VSSQXSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSD 193
Query: 208 PALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGF 257
           P   ++ ++++    G+F + + + NA L+L SD S   +G  L V+GGF
Sbjct: 194 PHKAKTMLNRIP--LGKFAEVEHVVNAILFLLSDRSGMTTGSTLPVEGGF 241

>pdb|1CYD|A Chain A, Carbonyl Reductase Complexed With Nadph And 2-Propanol Length = 244

Iteration: 1
 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 107/229 (46%), Gaps = 14/229 (6%)
Query: 32  VELFHENGAKVVIADVQDKLGEDLADKLG--QDVCYIHCDISNEDEVINLVDTAVSKFGK 89
           V+  H +GAKVV     +     LA +    + VC    D+ + D      + A+   G 
Sbjct: 24  VKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVC---VDLGDWDAT----EKALGGIGP 76
Query: 90  LDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQ-QKGCILFT 148
           +D++ NNA ++       L+  K   +R  +VN    F  ++  AR M+ +   G I+  
Sbjct: 77  VDLLVNNAALV--IMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNV 134
Query: 149 ASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDP 208
           +S    +       Y+ +K  +  L K +A ELG + IRVN V+P  + T M  K   DP
Sbjct: 135 SSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADP 194
Query: 209 ALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGF 257
                 + +   L+ +F + + + N+ L+L SD S+  SG  ++VD G+
Sbjct: 195 EFAR-KLKERHPLR-KFAEVEDVVNSILFLLSDRSASTSGGGILVDAGY 241

>pdb|1BDB|A Chain A, Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From Pseudomonas Sp. Lb400 Length = 277

Iteration: 1
 Score = 72.0 bits (175), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 87/169 (51%), Gaps = 7/169 (4%)
Query: 32  VELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLD 91
           V+ F   GAKV + D   +   +L    G +V  I  D+ + ++        V++FGK+D
Sbjct: 22  VDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKID 81
Query: 92  IMYNNAGILDRSFGSILDTPKSDLE----RLINVNTIGGFLGAKHAARVMVPQQKGCILF 147
            +  NAGI D S  +++D P+  L+     + ++N + G++ A  A    +   +G ++F
Sbjct: 82  TLIPNAGIWDYST-ALVDLPEESLDAAFDEVFHIN-VKGYIHAVKACLPALVASRGNVIF 139
Query: 148 TASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGL 196
           T S        G P YT +K+ I+GLV+ LA EL  Y +RVN V   G+
Sbjct: 140 TISNAGFYPNGGGPLYTAAKHAIVGLVRELAFELAPY-VRVNGVGSGGI 187

>pdb|3GK3|A Chain A, Crystal Structure Of Acetoacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 269

Iteration: 1
 Score = 71.6 bits (174), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 96/201 (47%), Gaps = 7/201 (3%)
Query: 60  GQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGIL-DRSFGSILDTPKSDLERL 118
           G+D      D+++ +      +  ++ FGK+D++ NNAGI  D +F   +   K D + +
Sbjct: 74  GRDFKAYAVDVADFESCERCAEKVLADFGKVDVLINNAGITRDATF---MKMTKGDWDAV 130
Query: 119 INVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLA 178
           +  +    F   K     MV ++ G I+   S        G   Y  +K GI G  K LA
Sbjct: 131 MRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASAKAGIHGFTKTLA 190
Query: 179 AELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYL 238
            E  + GI VN VSP  LAT  +M   V   ++E+ +     + G   + D +A    +L
Sbjct: 191 LETAKRGITVNTVSPGYLAT--AMVEAVPQDVLEAKILPQIPV-GRLGRPDEVAALIAFL 247
Query: 239 ASDESSYVSGQNLVVDGGFSV 259
            SD++ +V+G +L ++GG  +
Sbjct: 248 CSDDAGFVTGADLAINGGMHM 268

>pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From Streptococcus Suis Type 2 Length = 291

Iteration: 1
 Score = 71.6 bits (174), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 62/254 (24%), Positives = 117/254 (46%), Gaps = 13/254 (5%)
Query: 13  LEGKVXXXXXXXXXXXXXXVELFHENGAKVVIADVQDKL---GEDLADKLGQDVCYIHCD 69
           L+GK+                 + + GA +V  D+  +L   G       G +     CD
Sbjct: 32  LKGKIALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGINAHGYVCD 91
Query: 70  ISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLG 129
           +++ED +  +V    S+ G +DI+ NNAGI+ R    +++   +   ++I+++    F+ 
Sbjct: 92  VTDEDGIQAMVAQIESEVGIIDILVNNAGIIRRV--PMIEMTAAQFRQVIDIDLNAPFIV 149
Query: 130 AKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVN 189
           +K     M+ +  G I+   S  +E+      AY  +K G+  L K +A+E G+  I+ N
Sbjct: 150 SKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKGGLKMLTKNIASEYGEANIQCN 209
Query: 190 CVSPYGLATGMS------MKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDES 243
            + P  +AT  +       K G      +  +++       + + + +   A++LASD S
Sbjct: 210 GIGPGYIATPQTAPLRELQKDGSRHPFDQFIIAK--TPAARWGEAEDLMGPAVFLASDAS 267
Query: 244 SYVSGQNLVVDGGF 257
           ++V+G  L VDGG 
Sbjct: 268 NFVNGHILYVDGGI 281

>pdb|4IQG|C Chain C, Crystal Structure Of Bpro0239 Oxidoreductase From Polaromonas Sp. Js666 In Nadp Bound Form Length = 271

Iteration: 1
 Score = 71.6 bits (174), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 98/212 (46%), Gaps = 9/212 (4%)
Query: 49  DKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSIL 108
           D++   + +  GQ +  +  D++ E EV+   +T  ++ G+L  + NNAG++D++   + 
Sbjct: 64  DEVVRQIREAGGQALA-VQADVAKEREVLAXFETVDAQLGRLSALVNNAGVVDQTT-RVD 121
Query: 109 DTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPA----YT 164
                 L+R   +N  G FL A+ A +    +  G      +  +  A LGSP     Y 
Sbjct: 122 GITLERLQRXFEINVFGSFLCAREAVKRXSTRYGGSGGSIVNVSSAAARLGSPGQYVDYA 181
Query: 165 ISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGE 224
            +K  I      LA E+   GIRVN V P  + T +   GG+ P        Q+   +  
Sbjct: 182 AAKGAIDTFTLGLAKEVATEGIRVNAVRPGIIETDIHASGGL-PNRARDVAPQVPXQRAG 240
Query: 225 FLKTDGIANAALYLASDESSYVSGQNLVVDGG 256
             +   +A A ++L  D++SY +G  L V GG
Sbjct: 241 TARE--VAEAIVWLLGDQASYTTGALLDVTGG 270

>pdb|2FWM|X Chain X, Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodihydroxy Benzoate Dehydrogenase Length = 250

Iteration: 1
 Score = 71.2 bits (173), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 88/194 (45%), Gaps = 8/194 (4%)
Query: 69  DISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFL 128
           D+++  +V  +    +++  +LD + N AGIL    G+     K D ++   VN  G F 
Sbjct: 54  DVADAAQVAQVCQRLLAETERLDALVNAAGIL--RMGATDQLSKEDWQQTFAVNVGGAFN 111
Query: 129 GAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRV 188
             +        Q+ G I+  AS       +G  AY  SK  +  L   +  EL   G+R 
Sbjct: 112 LFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGLELAGSGVRC 171
Query: 189 NCVSPYGLATGMSMKGGVDPALIESSMS------QMGNLKGEFLKTDGIANAALYLASDE 242
           N VSP    T M     V     E  +       ++G   G+  +   IAN  L+LASD 
Sbjct: 172 NVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTILFLASDL 231
Query: 243 SSYVSGQNLVVDGG 256
           +S+++ Q++VVDGG
Sbjct: 232 ASHITLQDIVVDGG 245

>pdb|3KSU|A Chain A, Crystal Structure Of Short-Chain Dehydrogenase From Oenococcus Oeni Psu-1 Length = 262

Iteration: 1
 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/215 (25%), Positives = 99/215 (46%), Gaps = 9/215 (4%)
Query: 45  ADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSF 104
           +D  +KL ++L D+ G  V     D+SNE+EV  L D A  +FGK+DI  N  G + +  
Sbjct: 48  SDTANKLKDELEDQ-GAKVALYQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVLKK- 105
Query: 105 GSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYT 164
             I++T +++ + +  +N    +   K AA+ M P   G I+  A++           Y 
Sbjct: 106 -PIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPN--GHIITIATSLLAAYTGFYSTYA 162
Query: 165 ISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGE 224
            +K  +    +  + EL +  I VN ++P  + T          +        MGN   +
Sbjct: 163 GNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQETKESTAFHKSQAMGN---Q 219
Query: 225 FLKTDGIANAALYLASDESSYVSGQNLVVDGGFSV 259
             K + IA    +L +D   +++GQ +  +GG++ 
Sbjct: 220 LTKIEDIAPIIKFLTTD-GWWINGQTIFANGGYTT 253

>pdb|3CTM|A Chain A, Crystal Structure Of A Carbonyl Reductase From Candida Parapsilosis With Anti-Prelog Stereo-Specificity Length = 279

Iteration: 1
 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/253 (26%), Positives = 113/253 (44%), Gaps = 14/253 (5%)
Query: 13  LEGKVXXXXXXXXXXXXXXVELFHENGAKVVI---ADVQDKLGEDLADKLGQDVCYIHCD 69
           L+GKV               E + + GA V I   +   D+  E L    G       C+
Sbjct: 32  LKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCN 91
Query: 70  ISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSD-LERLINVNTIGGFL 128
           IS+   V   +      FG +D+   NAG+   + G  +D    D   ++I+V+  G + 
Sbjct: 92  ISDPKSVEETISQQEKDFGTIDVFVANAGVT-WTQGPEIDVDNYDSWNKIISVDLNGVYY 150
Query: 129 GAKHAARVMVPQQKGCILFTASACTEIAG---LGSPAYTISKYGILGLVKCLAAELGQYG 185
            + +  ++     KG ++ T+S   +I     L +P Y  +K     L K LA E   + 
Sbjct: 151 CSHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQAP-YNTAKAACTHLAKSLAIEWAPFA 209
Query: 186 IRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSY 245
            RVN +SP  + T ++     D   +++   Q+  L  E L T  +    LYLAS+ S++
Sbjct: 210 -RVNTISPGYIDTDITDFASKD---MKAKWWQLTPLGREGL-TQELVGGYLYLASNASTF 264
Query: 246 VSGQNLVVDGGFS 258
            +G ++V+DGG++
Sbjct: 265 TTGSDVVIDGGYT 277

>pdb|3UCX|A Chain A, The Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 264

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/232 (28%), Positives = 114/232 (49%), Gaps = 16/232 (6%)
Query: 37  ENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM 93
           E GA +V+A    +  ED+A ++   G+    +  DI+++ +V +LVD  +  +G++D++
Sbjct: 33  EQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGRVDVV 92
Query: 94  YNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACT 153
            NNA  +  S     +T    +   I + T+ G L         + + KG ++   S   
Sbjct: 93  INNAFRVP-SMKPFANTTFEHMRDAIEL-TVFGALRLIQGFTPALEESKGAVVNVNSMVV 150
Query: 154 EIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKG--------- 204
             +     AY ++K  +L + + LA ELG+ GIRVN V P G   G ++K          
Sbjct: 151 RHSQAKYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLP-GYIWGGTLKSYFEHQAGKY 209
Query: 205 GVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGG 256
           G     I ++ +   +LK      D +A+A L++ASD +S ++GQ L V+ G
Sbjct: 210 GTSVEDIYNAAAAGSDLK-RLPTEDEVASAILFMASDLASGITGQALDVNCG 260

>pdb|4E6P|A Chain A, Crystal Structure Of A Probable Sorbitol Dehydrogenase (Target Psi- 012078) From Sinorhizobium Meliloti 1021 Length = 259

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/256 (25%), Positives = 102/256 (39%), Gaps = 14/256 (5%)
Query: 11  KRLEGKVXXXXXXXXXXXXXXVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDI 70
           KRLEGK                E +   GA V IAD+  +     A ++G     +  D+
Sbjct: 4   KRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQXDV 63
Query: 71  SNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGG-FLG 129
           + +D +   +   V   G LDI+ NNA + D     I++  +   E+L  +N  G  F  
Sbjct: 64  TRQDSIDAAIAATVEHAGGLDILVNNAALFD--LAPIVEITRESYEKLFAINVAGTLFTL 121
Query: 130 AKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVN 189
              A + +   + G I+  AS            Y  +K  ++ L +    +L ++ I VN
Sbjct: 122 QAAARQXIAQGRGGKIINXASQAGRRGEALVAIYCATKAAVISLTQSAGLDLIKHRINVN 181
Query: 190 CVSPYGLATGMSMKGGVDPALIESSMSQMGNLK---------GEFLKTDGIANAALYLAS 240
            ++P G+  G     GVD           G  K         G     + +   A++LAS
Sbjct: 182 AIAP-GVVDGEHWD-GVDALFARYENRPRGEKKRLVGEAVPFGRXGTAEDLTGXAIFLAS 239
Query: 241 DESSYVSGQNLVVDGG 256
            ES Y+  Q   VDGG
Sbjct: 240 AESDYIVSQTYNVDGG 255

>pdb|3UXY|A Chain A, The Crystal Structure Of Short Chain Dehydrogenase From Rhodobacter Sphaeroides Length = 266

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/180 (30%), Positives = 87/180 (48%), Gaps = 13/180 (7%)
Query: 87  FGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCIL 146
            G+LDI+ NNAG++ R  G I +T  +D    + VN    F   + A  +      G I+
Sbjct: 92  LGRLDIVVNNAGVISR--GRITETTDADWSLSLGVNVEAPFRICRAAIPLXAAAGGGAIV 149
Query: 147 FTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPY-----GLATGMS 201
             AS      G G   Y ++K  +  L +C   +    GIR+N V P       L TG +
Sbjct: 150 NVASCWGLRPGPGHALYCLTKAALASLTQCXGXDHAPQGIRINAVCPNEVNTPXLRTGFA 209
Query: 202 MKGGVDPALIESSMSQMGNLK--GEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSV 259
            K G DP   + +++++G     G   + + IA+  L+LASD + Y+ G  + V+GG +V
Sbjct: 210 -KRGFDP---DRAVAELGRTVPLGRIAEPEDIADVVLFLASDAARYLCGSLVEVNGGKAV 265

>pdb|4B79|A Chain A, The Aeropath Project And Pseudomonas Aeruginosa High-throughput Crystallographic Studies For Assessment Of Potential Targets In Early Stage Drug Discovery. Length = 242

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 94/195 (48%), Gaps = 23/195 (11%)
Query: 69  DISNEDEVINLVDTAVSKFGKLDIMYNNAGI-LDRSFGSILDTPKSDLERLINVNTIGGF 127
           DI++   +  L +       +LD++ NNAGI  DR      +   +  ER++ +N     
Sbjct: 62  DITDSQRLQRLFEA----LPRLDVLVNNAGISRDRE-----EYDLATFERVLRLNLSAAM 112
Query: 128 LGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIR 187
           L A   AR ++ Q+ G IL  AS  +       PAY+ SK  I+ L + LA E     IR
Sbjct: 113 L-ASQLARPLLAQRGGSILNIASMYSTFGSADRPAYSASKGAIVQLTRSLACEYAAERIR 171
Query: 188 VNCVSPYGLAT--GMSMKGGVDPA---LIESSMSQMGNLKGEFLKTDGIANAALYLASDE 242
           VN ++P  + T  G  +K  V+     +  + +++ G       +   +A+AA +L    
Sbjct: 172 VNAIAPGWIDTPLGAGLKADVEATRRIMQRTPLARWG-------EAPEVASAAAFLCGPG 224
Query: 243 SSYVSGQNLVVDGGF 257
           +S+V+G  L VDGG+
Sbjct: 225 ASFVTGAVLAVDGGY 239

>pdb|2Y93|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3- Dehydrogenase (Bphb)from Pandoraea Pnomenusa Strain B-356. Length = 281

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/211 (26%), Positives = 101/211 (47%), Gaps = 9/211 (4%)
Query: 12  RLEGKVXXXXXXXXXXXXXXVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDIS 71
           +L G+V              V+ F   GA+V + D   +   +L    G +   +  D+ 
Sbjct: 2   KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVR 61
Query: 72  NEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLER----LINVNTIGGF 127
           +  +     +  ++ FGK+D +  NAGI D S  ++ D P+  ++     + +VN + G+
Sbjct: 62  SLQDQKRAAERCLAAFGKIDTLIPNAGIWDYST-ALADLPEDKIDAAFDDIFHVN-VKGY 119
Query: 128 LGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIR 187
           + A  A    +   +G ++FT S        G P YT +K+ ++GLV+ +A EL  + +R
Sbjct: 120 IHAVKACLPALVSSRGSVVFTISNAGFYPNGGGPLYTATKHAVVGLVRQMAFELAPH-VR 178
Query: 188 VNCVSPYGLATGMSMKGGVDPALIESSMSQM 218
           VN V+P G+ T   ++G     L E S+S +
Sbjct: 179 VNGVAPGGMNT--DLRGPSSLGLSEQSISSV 207

>pdb|4E3Z|A Chain A, Crystal Structure Of A Oxidoreductase From Rhizobium Etli Cfn 42 Length = 272

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/229 (31%), Positives = 101/229 (44%), Gaps = 25/229 (10%)
Query: 36  HENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYN 95
           +   A  V+A + +  GE +A         I  D+ N  ++         +FG+LD + N
Sbjct: 60  NREAADAVVAAITESGGEAVA---------IPGDVGNAADIAAXFSAVDRQFGRLDGLVN 110
Query: 96  NAGILDRSFGSILDTPKSD-LERLINVNTIGGFLGAKHAAR---VMVPQQKGCILFTASA 151
           NAGI+D  +   +D    + +ER + VN  G  L A  A R    +   Q G I+  +S 
Sbjct: 111 NAGIVD--YPQRVDEXSVERIERXLRVNVTGSILCAAEAVRRXSRLYSGQGGAIVNVSSX 168
Query: 152 CTEIAGLGSPA----YTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVD 207
               A LGS      Y  SK  I      LA E+   GIRVN V P  + T +   GG+ 
Sbjct: 169 A---AILGSATQYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGLP 225
Query: 208 PALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGG 256
               E + S      G     + +A+A LYL S  +SYV+G  L V GG
Sbjct: 226 DRAREXAPSVPXQRAG---XPEEVADAILYLLSPSASYVTGSILNVSGG 271

>pdb|3UF0|A Chain A, Crystal Structure Of A Putative Nad(P) Dependent Gluconate 5- Dehydrogenase From Beutenbergia Cavernae(Efi Target Efi-502044) With Bound Nadp (Low Occupancy) Length = 273

Iteration: 1
 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/208 (24%), Positives = 102/208 (49%), Gaps = 6/208 (2%)
Query: 50  KLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILD 109
           ++ +++AD  G     +  D+++ +   N+ +  ++   ++D++ NNAGI+ R+    + 
Sbjct: 69  EVADEIADGGGSAEAVV-ADLADLEGAANVAEE-LAATRRVDVLVNNAGIIARAPAEEVS 126
Query: 110 TPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYG 169
             +     ++ VN    ++ ++     M+    G I+  AS  +   G    AY  SK+ 
Sbjct: 127 LGR--WREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAASKHA 184
Query: 170 ILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTD 229
           ++GL + LA+E    G+ VN ++P  + T  +     D        +++    G +   +
Sbjct: 185 VVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADDERAAEITARI--PAGRWATPE 242
Query: 230 GIANAALYLASDESSYVSGQNLVVDGGF 257
            +   A++LASD +SYV GQ L VDGG+
Sbjct: 243 DMVGPAVFLASDAASYVHGQVLAVDGGW 270

>pdb|1GZ6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat Peroxisomal Multifunctional Enzyme Type 2 Length = 319

Iteration: 1
 Score = 68.9 bits (167), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/169 (33%), Positives = 81/169 (47%), Gaps = 13/169 (7%)
Query: 35  FHENGAKVVIADVQDKL-----GEDLADKLGQDVCYIHCD-ISNEDEVI---NLVDTAVS 85
           F E GA VV+ D+         G   ADK+ +++       ++N D V     LV TA+ 
Sbjct: 29  FAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTALD 88
Query: 86  KFGKLDIMYNNAGIL-DRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGC 144
            FG++D++ NNAGIL DRSF  I D    D + +  V+  G F   + A      Q  G 
Sbjct: 89  TFGRIDVVVNNAGILRDRSFSRISD---EDWDIIQRVHLRGSFQVTRAAWDHXKKQNYGR 145
Query: 145 ILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSP 193
           I+ TASA       G   Y+ +K G+LGL   L  E  +  I  N ++P
Sbjct: 146 IIXTASASGIYGNFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAP 194

>pdb|1YXM|A Chain A, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa Reductase Length = 303

Iteration: 1
 Score = 68.9 bits (167), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 68/267 (25%), Positives = 115/267 (43%), Gaps = 35/267 (13%)
Query: 13  LEGKVXXXXXXXXXXXXXXVELFHENGAKVVIADVQ--------DKLGEDLADKLGQDVC 64
           L+G+V              V+   E G+ VVIA  +        D+L  +L       V 
Sbjct: 16  LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVI 75
Query: 65  YIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAG---------ILDRSFGSILDTPKSDL 115
            I C+I NE+EV NLV + +  FGK++ + NN G         I  + + ++L+T     
Sbjct: 76  PIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLET----- 130
Query: 116 ERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYT-ISKYGILGLV 174
                 N  G F   K      + +  G I+         AG     ++  ++ G+  L 
Sbjct: 131 ------NLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTK--AGFPLAVHSGAARAGVYNLT 182
Query: 175 KCLAAELGQYGIRVNCVSPYGL--ATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIA 232
           K LA E    GIR+NCV+P  +   T +   G    +  E S  ++   +      + ++
Sbjct: 183 KSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKR--IGVPEEVS 240
Query: 233 NAALYLASDESSYVSGQNLVVDGGFSV 259
           +   +L S  +S+++GQ++ VDGG S+
Sbjct: 241 SVVCFLLSPAASFITGQSVDVDGGRSL 267

>pdb|3V8B|A Chain A, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From Sinorhizobium Meliloti 1021 Length = 283

Iteration: 1
 Score = 68.9 bits (167), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 60/215 (27%), Positives = 103/215 (47%), Gaps = 13/215 (6%)
Query: 53  EDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILD 109
           E++AD++   G     +  D+S+E +  N V   V KFG LDI+  NAGI +  +  I D
Sbjct: 66  EEVADEIVGAGGQAIALEADVSDELQXRNAVRDLVLKFGHLDIVVANAGI-NGVWAPIDD 124
Query: 110 TPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYG 169
               + +  I VN  G FL   H     + Q+ G  +   S+        +P  T     
Sbjct: 125 LKPFEWDETIAVNLRGTFL-TLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAYTAT 183
Query: 170 I---LGLVKCLAAELGQYGIRVNCVSPYGLATGMS----MKGGVDPAL-IESSMSQMGNL 221
               + +V+ LA ELG++ IRVN V P  + T +S    ++   + A+ +E    Q+   
Sbjct: 184 KAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPIT 243
Query: 222 KGEFLKTDGIANAALYLASDESSYVSGQNLVVDGG 256
            G+  +++ +A    +L S+ + +V+G  + +DGG
Sbjct: 244 DGQPGRSEDVAELIRFLVSERARHVTGSPVWIDGG 278

>pdb|3OML|A Chain A, Structure Of Full-Length Peroxisomal Multifunctional Enzyme Type 2 From Drosophila Melanogaster Length = 613

Iteration: 1
 Score = 68.6 bits (166), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 84/170 (49%), Gaps = 13/170 (7%)
Query: 34  LFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCD------ISNEDEVIN---LVDTAV 84
           LF E GAKVV+ D+      D A +   D+            +++ + VI+   +++TA+
Sbjct: 38  LFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSVIDGAKVIETAI 97
Query: 85  SKFGKLDIMYNNAGIL-DRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKG 143
             FG++DI+ NNAGIL DRS   ++ T + D   + +V+  G F   + A   M  Q  G
Sbjct: 98  KAFGRVDILVNNAGILRDRS---LVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYG 154
Query: 144 CILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSP 193
            I+ T+S        G   YT +K G++GL   +A E  +  +  N + P
Sbjct: 155 RIIMTSSNSGIYGNFGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVP 204

>pdb|3PK0|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE SDR FROM Mycobacterium Smegmatis Length = 262

Iteration: 1
 Score = 68.2 bits (165), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 65/232 (28%), Positives = 105/232 (45%), Gaps = 19/232 (8%)
Query: 34  LFHENGAKVVIADVQ----DKLGEDLADKLGQ-DVCYIHCDISNEDEVINLVDTAVSKFG 88
           +F   GA V +A       D    DL D+LG   V  +  D+S+  +   L   AV +FG
Sbjct: 29  VFARAGANVAVAGRSTADIDACVADL-DQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFG 87
Query: 89  KLDIMYNNAGIL-DRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILF 147
            +D++  NAG+  D    ++  TP+  L  +  VN  G F   +     ++    G ++ 
Sbjct: 88  GIDVVCANAGVFPDAPLATM--TPE-QLNGIFAVNVNGTFYAVQACLDALIASGSGRVVL 144
Query: 148 TASACTEIAGL-GSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGV 206
           T+S    I G  G   Y  +K   LG ++  A EL  + I VN + P  + T   ++ G 
Sbjct: 145 TSSITGPITGYPGWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLENG- 203
Query: 207 DPALIESSMSQMGN--LKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGG 256
                E  ++ M      G     + I + A +LA+ E+ Y++GQ + VDGG
Sbjct: 204 -----EEYIASMARSIPAGALGTPEDIGHLAAFLATKEAGYITGQAIAVDGG 250

>pdb|3U5T|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Sinorhizobium Meliloti Length = 267

Iteration: 1
 Score = 67.8 bits (164), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 65/212 (30%), Positives = 102/212 (48%), Gaps = 18/212 (8%)
Query: 53  EDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILD 109
           E++A K+   G        D+S+   V  L  TA   FG +D++ NNAGI      +I +
Sbjct: 66  EEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFGGVDVLVNNAGIX--PLTTIAE 123
Query: 110 TPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTI---S 166
           T  +  +R+I VN  G F   + AA+ +  +  G I+   +  T   GL  P+Y I   +
Sbjct: 124 TGDAVFDRVIAVNLKGTFNTLREAAQRL--RVGGRII---NXSTSQVGLLHPSYGIYAAA 178
Query: 167 KYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFL 226
           K G+      L+ EL    I VN V+P   AT + ++G  D   +    +++  L  E L
Sbjct: 179 KAGVEAXTHVLSKELRGRDITVNAVAPGPTATDLFLEGKSDE--VRDRFAKLAPL--ERL 234
Query: 227 KT-DGIANAALYLASDESSYVSGQNLVVDGGF 257
            T   IA A  +LA  + ++V+GQ L  +GG 
Sbjct: 235 GTPQDIAGAVAFLAGPDGAWVNGQVLRANGGI 266

>pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain Oxidoreductase (Sdr) In Complex With Nadp Length = 262

Iteration: 1
 Score = 67.8 bits (164), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 76/150 (50%), Gaps = 11/150 (7%)
Query: 68  CDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPK-SDLERLINVNTIGG 126
           CD+S+ D +       ++  G+ D++ NNAG+    FG  L T K ++ + LI VN    
Sbjct: 85  CDLSHSDAIAAFATGVLAAHGRCDVLVNNAGV--GWFGGPLHTMKPAEWDALIAVNLKAP 142
Query: 127 FLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGI 186
           +L  +  A  M+  ++G I+  +S   +       AYT SK+G+ GL+   A EL Q+ +
Sbjct: 143 YLLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTASKWGLNGLMTSAAEELRQHQV 202
Query: 187 RVNCVSP--------YGLATGMSMKGGVDP 208
           RV+ V+P         GL+   S  G ++P
Sbjct: 203 RVSLVAPGSVRTEFGVGLSAKKSALGAIEP 232

>pdb|2Q2Q|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From Pseudomonas Putida Length = 255

Iteration: 1
 Score = 67.4 bits (163), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 59/234 (25%), Positives = 99/234 (42%), Gaps = 12/234 (5%)
Query: 33  ELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIH--CDISNEDEVINLVDTAVSKFGKL 90
           ++    GA +V+    D     LA+     V  +H   D+S+  ++  L   A  +FG +
Sbjct: 22  QVLARAGANIVLNGFGDP-APALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGV 80
Query: 91  DIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTAS 150
           DI+ NNAGI  +    +   P    +++I +N    F G + A   M  +  G I+  AS
Sbjct: 81  DILVNNAGI--QHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIAS 138
Query: 151 ACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMK------- 203
               +   G  AY  +K+G++GL K +  E     +  N + P  + T +  K       
Sbjct: 139 VHGLVGSTGKAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAA 198
Query: 204 GGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGF 257
            G DP   +  +         F+  + +    L+L S+  S V G    VDGG+
Sbjct: 199 NGGDPLQAQHDLLAEKQPSLAFVTPEHLGELVLFLCSEAGSQVRGAAWNVDGGW 252

>pdb|1W6U|A Chain A, Structure Of Human Decr Ternary Complex Length = 302

Iteration: 1
 Score = 67.4 bits (163), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 114/261 (43%), Gaps = 16/261 (6%)
Query: 9   PFKRLEGKVXXXXXXXXXXXXXXVELFHENGAKVVIA----DVQDKLGEDLADKLGQDVC 64
           P    +GKV                L    GA+ VIA    DV     E ++ + G  V 
Sbjct: 20  PPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVH 79
Query: 65  YIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTI 124
            I CD+ + D V N V   +   G  +I+ NNA     +F S  +    +  + I    +
Sbjct: 80  AIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAA---GNFISPTERLSPNAWKTITDIVL 136
Query: 125 GG--FLGAKHAARVMVPQQKGCILFTASACTEI-AGLGSPAYTISKYGILGLVKCLAAEL 181
            G  F+  +   +++  Q+    L   +   E  +G   P+ + +K G+  + K LAAE 
Sbjct: 137 NGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSAS-AKAGVEAMSKSLAAEW 195
Query: 182 GQYGIRVNCVSPYGLATGMSMKGGVDPA-LIESSMSQMGNLK-GEFLKTDGIANAALYLA 239
           G+YG+R N + P  + T  +    +DP    E  M  +G +  G     + +AN A +L 
Sbjct: 196 GKYGMRFNVIQPGPIKTKGAF-SRLDPTGTFEKEM--IGRIPCGRLGTVEELANLAAFLC 252
Query: 240 SDESSYVSGQNLVVDGGFSVV 260
           SD +S+++G  +  DGG  V+
Sbjct: 253 SDYASWINGAVIKFDGGEEVL 273

>pdb|4GKB|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase Homolog (Target Efi- 505321) From Burkholderia Multivorans, Unliganded Structure Length = 258

Iteration: 1
 Score = 67.4 bits (163), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 98/211 (46%), Gaps = 16/211 (7%)
Query: 57  DKLGQD---VCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKS 113
           D L Q      Y+  ++ ++ +  + V   ++ FG+LD + NNAG+ D   G  LD  + 
Sbjct: 48  DALAQRQPRATYLPVELQDDAQCRDAVAQTIATFGRLDGLVNNAGVND---GIGLDAGRD 104
Query: 114 DLERLINVNTIGGFLGAKHAARVMVPQQKGC--ILFTASACTEIAGLGSPA-YTISKYGI 170
                +  N I  +  A +     VP  K     +   S+ T + G G+ + Y  SK   
Sbjct: 105 AFVASLERNLIHYYAMAHYC----VPHLKATRGAIVNISSKTAVTGQGNTSGYCASKGAQ 160
Query: 171 LGLVKCLAAELGQYGIRVNCVSPYGLATGM---SMKGGVDPALIESSMSQMGNLKGEFLK 227
           L L +  A  L ++G+RVN V P  + T +    +    DP    + ++    L   F  
Sbjct: 161 LALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPLGRRFTT 220
Query: 228 TDGIANAALYLASDESSYVSGQNLVVDGGFS 258
            D IA+ A++L S  +S+ +G+ L VDGG++
Sbjct: 221 PDEIADTAVFLLSPRASHTTGEWLFVDGGYT 251

>pdb|4FGS|A Chain A, Crystal Structure Of A Probable Dehydrogenase Protein Length = 273

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 116/258 (44%), Gaps = 17/258 (6%)
Query: 11  KRLEGKVXXXXXXXXXXXXXXVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDI 70
           +RL  K+               + F   GA+V I   +  + +    ++G     I  D 
Sbjct: 25  QRLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADS 84
Query: 71  SNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINV--NTIGGFL 128
           +N  E+  L +   ++ G++D+++ NAG      GS L   +   E+  +     + G L
Sbjct: 85  ANLAELDRLYEKVKAEAGRIDVLFVNAG-----GGSXLPLGEVTEEQYDDTFDRNVKGVL 139
Query: 129 GAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTI---SKYGILGLVKCLAAELGQYG 185
                A  ++ +    +L  ++A +     G+PA+++   SK  +    +    +L   G
Sbjct: 140 FTVQKALPLLARGSSVVLTGSTAGST----GTPAFSVYAASKAALRSFARNWILDLKDRG 195
Query: 186 IRVNCVSPYGL-ATGMSMKGGVDPALIESSMSQMGNL--KGEFLKTDGIANAALYLASDE 242
           IR+N +SP     TG+    G DP   +  ++ +      G   + + +A AAL+LASD+
Sbjct: 196 IRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPXGRVGRAEEVAAAALFLASDD 255
Query: 243 SSYVSGQNLVVDGGFSVV 260
           SS+V+G  L VDGG + V
Sbjct: 256 SSFVTGAELFVDGGSAQV 273

>pdb|3EZL|A Chain A, Crystal Structure Of Acetyacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 256

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/231 (25%), Positives = 104/231 (45%), Gaps = 14/231 (6%)
Query: 33  ELFHENGAKVVI-----ADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKF 87
           +  H++G +VV      +  + K  ED    LG D      ++ + D      D   ++ 
Sbjct: 31  QRLHKDGFRVVAGCGPNSPRRVKWLED-QKALGFDFYASEGNVGDWDSTKQAFDKVKAEV 89
Query: 88  GKLDIMYNNAGIL-DRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCIL 146
           G++D++ NNAGI  D  F  +    + D + +I+ N    F   K     MV +  G I+
Sbjct: 90  GEIDVLVNNAGITRDVVFRKM---TREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRII 146
Query: 147 FTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGV 206
             +S   +    G   Y+ +K GI G    LA E+   G+ VN VSP  + T   M   +
Sbjct: 147 NISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGT--DMVKAI 204
Query: 207 DPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGF 257
            P ++E  ++ +   +      D I +   +LAS+ES + +G +  ++GG 
Sbjct: 205 RPDVLEKIVATIPVRR--LGSPDEIGSIVAWLASEESGFSTGADFSLNGGL 253

>pdb|1H5Q|A Chain A, Mannitol Dehydrogenase From Agaricus Bisporus Length = 265

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/219 (26%), Positives = 97/219 (44%), Gaps = 18/219 (8%)
Query: 46  DVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFG 105
           +V +K+G++     G       CD+SN D V   +    +  G +  +  NAG+      
Sbjct: 53  EVTEKVGKEF----GVKTKAYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGV--SVVK 106
Query: 106 SILDTPKSDLERLINVNTIGGFLGAKHAARVMV-PQQKGCILFTASACTEI-------AG 157
              +    D   + +VN  G F   +  A++ +  QQKG I+ T+S  ++I         
Sbjct: 107 PATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGS 166
Query: 158 LGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQ 217
           L    Y  SK     LVK LAAE    GIRVN +SP  + T  +    +D  + +   S 
Sbjct: 167 LTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAH--MDKKIRDHQASN 224
Query: 218 MGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGG 256
           +      F + + +   A+ L SD ++Y++G    +DGG
Sbjct: 225 IP--LNRFAQPEEMTGQAILLLSDHATYMTGGEYFIDGG 261

>pdb|3EDM|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Agrobacterium Tumefaciens Length = 259

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 101/201 (50%), Gaps = 8/201 (3%)
Query: 57  DKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLD-IMYNNAGILDRSFGSILDTPKSDL 115
           +KLG+    I  D++N  EV   +  A  KFG++  +++   G++ R   +I +  ++  
Sbjct: 54  EKLGRSALAIKADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARK--TIAEMDEAFW 111
Query: 116 ERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVK 175
            ++++VN    FL AK A   M  +    + F++ A  +  G G+ AY  SK  ++   +
Sbjct: 112 HQVLDVNLTSLFLTAKTALPKMA-KGGAIVTFSSQAGRDGGGPGALAYATSKGAVMTFTR 170
Query: 176 CLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAA 235
            LA E+G   IRVN V P  ++T  +         +   ++   +LK E    D +A   
Sbjct: 171 GLAKEVGPK-IRVNAVCPGMIST--TFHDTFTKPEVRERVAGATSLKREGSSED-VAGLV 226
Query: 236 LYLASDESSYVSGQNLVVDGG 256
            +LASD+++YV+G    ++GG
Sbjct: 227 AFLASDDAAYVTGACYDINGG 247

>pdb|2AE2|A Chain A, Tropinone Reductase-Ii Complexed With Nadp+ And Pseudotropine Length = 260

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 95/203 (46%), Gaps = 26/203 (12%)
Query: 68  CDISNEDEVINLVDTAVSKF-GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGG 126
           CD+S+  E   L++T  + F GKL+I+ NNAGI+   +    D    D   ++++N    
Sbjct: 65  CDLSSRSERQELMNTVANHFHGKLNILVNNAGIV--IYKEAKDYTVEDYSLIMSIN---- 118
Query: 127 FLGAKHAARVMVP----QQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELG 182
           F  A H + +  P     ++G ++F +S    +A      Y  +K  +  L +CLA E  
Sbjct: 119 FEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWA 178
Query: 183 QYGIRVNCVSPYGLATGMSMKGGVDPALIES--------SMSQMGNLKGEFLKTDGIANA 234
           +  IRVN V P  +AT +      DP   E+        ++ +MG  K        +A  
Sbjct: 179 KDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPK-------ELAAM 231
Query: 235 ALYLASDESSYVSGQNLVVDGGF 257
             +L    +SYV+GQ + VDGG 
Sbjct: 232 VAFLCFPAASYVTGQIIYVDGGL 254

>pdb|1IPE|A Chain A, Tropinone Reductase-Ii Complexed With Nadph Length = 259

Iteration: 1
 Score = 65.9 bits (159), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 95/203 (46%), Gaps = 26/203 (12%)
Query: 68  CDISNEDEVINLVDTAVSKF-GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGG 126
           CD+S+  E   L++T  + F GKL+I+ NNAGI+   +    D    D   ++++N    
Sbjct: 64  CDLSSRSERQELMNTVANHFHGKLNILVNNAGIV--IYKEAKDYTVEDYSLIMSIN---- 117
Query: 127 FLGAKHAARVMVP----QQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELG 182
           F  A H + +  P     ++G ++F +S    +A      Y  +K  +  L +CLA E  
Sbjct: 118 FEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWA 177
Query: 183 QYGIRVNCVSPYGLATGMSMKGGVDPALIES--------SMSQMGNLKGEFLKTDGIANA 234
           +  IRVN V P  +AT +      DP   E+        ++ +MG  K        +A  
Sbjct: 178 KDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPK-------ELAAM 230
Query: 235 ALYLASDESSYVSGQNLVVDGGF 257
             +L    +SYV+GQ + VDGG 
Sbjct: 231 VAFLCFPAASYVTGQIIYVDGGL 253

>pdb|3TPC|A Chain A, Crystal Structure Of A Hypothtical Protein Sma1452 From Sinorhizobium Meliloti 1021 Length = 257

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 16/169 (9%)
Query: 37  ENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNN 96
           + GA V+  D++   GE+ A +LG  V + + D++NE +    +  A  +FG +  + N 
Sbjct: 29  QEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVHGLVNC 88
Query: 97  AG------ILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVM------VPQQKGC 144
           AG      IL RS    LD+      R + VN IG F   + AA V          ++G 
Sbjct: 89  AGTAPGEKILGRSGPHALDS----FARTVAVNLIGTFNXIRLAAEVXSQGEPDADGERGV 144
Query: 145 ILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSP 193
           I+ TAS       +G  AY  SK G+  L    A EL ++GIRV  ++P
Sbjct: 145 IVNTASIAAFDGQIGQAAYAASKGGVAALTLPAARELARFGIRVVTIAP 193

>pdb|4E4Y|A Chain A, The Crystal Structure Of A Short Chain Dehydrogenase Family Protein From Francisella Tularensis Subsp. Tularensis Schu S4 Length = 244

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 66/245 (26%), Positives = 109/245 (44%), Gaps = 41/245 (16%)
Query: 32  VELFHENGAKVVI-ADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKL 90
           VEL  +N    VI  D+Q            +++ +I  D++ + ++ N++D  + K    
Sbjct: 21  VELLLQNKNHTVINIDIQQSFS-------AENLKFIKADLTKQQDITNVLD--IIKNVSF 71
Query: 91  DIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTAS 150
           D ++ NAGIL +  GSI D     +++++++N        K     +  +    I+F  S
Sbjct: 72  DGIFLNAGILIK--GSIFDIDIESIKKVLDLNVWSSIYFIKGLENNL--KVGASIVFNGS 127
Query: 151 ACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPAL 210
               IA   S AYT+SK  I    K LA +L +Y IRVN V P          G VD  L
Sbjct: 128 DQCFIAKPNSFAYTLSKGAIAQXTKSLALDLAKYQIRVNTVCP----------GTVDTDL 177
Query: 211 IESSMSQMGNLKG------------EF-----LKTDGIANAALYLASDESSYVSGQNLVV 253
             + + +  N  G            EF      +   IA   ++L SD+S + +G  + +
Sbjct: 178 YRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAELVIFLLSDKSKFXTGGLIPI 237
Query: 254 DGGFS 258
           DGG++
Sbjct: 238 DGGYT 242

>pdb|3LYL|A Chain A, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg From Francisella Tularensis Length = 247

Iteration: 1
 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 78/169 (46%), Gaps = 10/169 (5%)
Query: 90  LDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTA 149
           +DI+ NNAGI   +        + + + +IN N    F  +K   R    ++ G I+   
Sbjct: 83  IDILVNNAGITRDNL--XXRXSEDEWQSVINTNLSSIFRXSKECVRGXXKKRWGRIISIG 140
Query: 150 SACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPA 209
           S        G   Y  +K G++G  K LA E+    I VN V+P  +AT  + K      
Sbjct: 141 SVVGSAGNPGQTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDXTDK------ 194
Query: 210 LIESSMSQMGNL--KGEFLKTDGIANAALYLASDESSYVSGQNLVVDGG 256
           L +   S +      G+  +   IA A  +LAS+E+ Y++GQ L V+GG
Sbjct: 195 LTDEQKSFIATKIPSGQIGEPKDIAAAVAFLASEEAKYITGQTLHVNGG 243

>pdb|2C7V|A Chain A, Structure Of Trypanosoma Brucei Pteridine Reductase (Ptr1) In Ternary Complex With Cofactor And The Antifolate Methotrexate Length = 268

Iteration: 1
 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 108/259 (41%), Gaps = 46/259 (17%)
Query: 35  FHENGAKVVI-----ADVQDKLGEDLADKLGQDVCYIHCDISNE-------DEVINLVDT 82
            H+ G +VVI     A+    L ++L  +          D++N        +E+IN   +
Sbjct: 23  LHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVXQADLTNSNVLPASCEEIIN---S 79
Query: 83  AVSKFGKLDIMYNNAGIL-----------DRSFGSILDTPKSDLERLINVNTIGGFLGAK 131
               FG+ D++ NNA              D S G  ++T    +  LI  N I  FL   
Sbjct: 80  CFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVET---QVAELIGTNAIAPFLLTM 136
Query: 132 HAARVMVPQQKGC------ILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYG 185
             A+        C      I+    A  +   +    Y + K+ ++GL +  A EL  YG
Sbjct: 137 SFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPXMAFSLYNMGKHALVGLTQSAALELAPYG 196
Query: 186 IRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGN---LKGEFLKTDGIANAALYLASDE 242
           IRVN V+P     G+S+   +  A+ E    +      L       + IA+A ++L S  
Sbjct: 197 IRVNGVAP-----GVSL---LPVAMGEEEKDKWRRKVPLGRREASAEQIADAVIFLVSGS 248
Query: 243 SSYVSGQNLVVDGGFSVVN 261
           + Y++G  + VDGG S+V+
Sbjct: 249 AQYITGSIIKVDGGLSLVH 267

>pdb|2QIO|A Chain A, X-Ray Structure Of Enoyl-Acyl Carrier Protein Reductase From Bacillus Anthracis With Triclosan Length = 256

Iteration: 1
 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 61/232 (26%), Positives = 110/232 (47%), Gaps = 10/232 (4%)
Query: 35  FHENGAKVVIADVQDKLGE---DLADKL-GQDVCYIHCDISNEDEVINLVDTAVSKFGKL 90
            H  GAK++     ++L     +LAD L GQ+   + CD++N++E+    +T   + G +
Sbjct: 28  LHNAGAKLIFTYAGERLERNVRELADTLEGQESLVLPCDVTNDEELTACFETIKQEVGTI 87
Query: 91  DIMYNNAGILDRS--FGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFT 148
             + +     +R    G  +DT +       N++       A+ A +VM   + G IL  
Sbjct: 88  HGVAHCIAFANRDDLKGEFVDTSRDGFLLAQNISAFSLTAVAREAKKVMT--EGGNILTL 145
Query: 149 ASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDP 208
                E          ++K  +   VK LA +LGQ+GIRVN +S   + T +S KG  D 
Sbjct: 146 TYLGGERVVKNYNVMGVAKASLEASVKYLANDLGQHGIRVNAISAGPIRT-LSAKGVGDF 204
Query: 209 ALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVV 260
             I   + +   L+    + + + + A++L SD +  V+G+N+ VD G+ ++
Sbjct: 205 NSILREIEERAPLRRTTTQEE-VGDTAVFLFSDLARGVTGENIHVDSGYHIL 255

>pdb|3OJF|A Chain A, Crystal Structure Of The Bacillus Cereus Enoyl-Acyl Carrier Protein Reductase With Nadp+ And Indole Naphthyridinone (Complex Form) Length = 257

Iteration: 1
 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 61/232 (26%), Positives = 110/232 (47%), Gaps = 10/232 (4%)
Query: 35  FHENGAKVVIADVQDKLGE---DLADKL-GQDVCYIHCDISNEDEVINLVDTAVSKFGKL 90
            H  GAK++     ++L     +LAD L GQ+   + CD++N++E+    +T   + G +
Sbjct: 28  LHNAGAKLIFTYAGERLERNVRELADTLEGQESLVLPCDVTNDEELTACFETIKQEVGTI 87
Query: 91  DIMYNNAGILDRS--FGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFT 148
             + +     +R    G  +DT +       N++       A+ A +VM   + G IL  
Sbjct: 88  HGVAHCIAFANRDDLKGEFVDTSRDGFLLAQNISAFSLTAVAREAKKVMT--EGGNILTL 145
Query: 149 ASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDP 208
                E          ++K  +   VK LA +LGQ+GIRVN +S   + T +S KG  D 
Sbjct: 146 TYLGGERVVKNYNVMGVAKASLEASVKYLANDLGQHGIRVNAISAGPIRT-LSAKGVGDF 204
Query: 209 ALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVV 260
             I   + +   L+    + + + + A++L SD +  V+G+N+ VD G+ ++
Sbjct: 205 NSILREIEERAPLRRTTTQEE-VGDTAVFLFSDLARGVTGENIHVDSGYHIL 255

>pdb|3JQ7|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine (Dx2) Length = 288

Iteration: 1
 Score = 64.7 bits (156), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 108/259 (41%), Gaps = 46/259 (17%)
Query: 35  FHENGAKVVI-----ADVQDKLGEDLADKLGQDVCYIHCDISNE-------DEVINLVDT 82
            H+ G +VVI     A+    L ++L  +          D++N        +E+IN   +
Sbjct: 43  LHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVXQADLTNSNVLPASCEEIIN---S 99
Query: 83  AVSKFGKLDIMYNNAGIL-----------DRSFGSILDTPKSDLERLINVNTIGGFLGAK 131
               FG+ D++ NNA              D S G  ++T    +  LI  N I  FL   
Sbjct: 100 CFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVET---QVAELIGTNAIAPFLLTM 156
Query: 132 HAARVMVPQQKGC------ILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYG 185
             A+        C      I+    A  +   +    Y + K+ ++GL +  A EL  YG
Sbjct: 157 SFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPXMAFSLYNMGKHALVGLTQSAALELAPYG 216
Query: 186 IRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGN---LKGEFLKTDGIANAALYLASDE 242
           IRVN V+P     G+S+   +  A+ E    +      L       + IA+A ++L S  
Sbjct: 217 IRVNGVAP-----GVSL---LPVAMGEEEKDKWRRKVPLGRREASAEQIADAVIFLVSGS 268
Query: 243 SSYVSGQNLVVDGGFSVVN 261
           + Y++G  + VDGG S+V+
Sbjct: 269 AQYITGSIIKVDGGLSLVH 287

>pdb|3BMC|A Chain A, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Substrate (Folate) Length = 288

Iteration: 1
 Score = 64.7 bits (156), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 108/259 (41%), Gaps = 46/259 (17%)
Query: 35  FHENGAKVVI-----ADVQDKLGEDLADKLGQDVCYIHCDISNE-------DEVINLVDT 82
            H+ G +VVI     A+    L ++L  +          D++N        +E+IN   +
Sbjct: 43  LHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIIN---S 99
Query: 83  AVSKFGKLDIMYNNAGIL-----------DRSFGSILDTPKSDLERLINVNTIGGFLGAK 131
               FG+ D++ NNA              D S G  ++T    +  LI  N I  FL   
Sbjct: 100 CFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVET---QVAELIGTNAIAPFLLTM 156
Query: 132 HAARVMVPQQKGC------ILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYG 185
             A+        C      I+    A  +   +    Y + K+ ++GL +  A EL  YG
Sbjct: 157 SFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPXMAFSLYNMGKHALVGLTQSAALELAPYG 216
Query: 186 IRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGN---LKGEFLKTDGIANAALYLASDE 242
           IRVN V+P     G+S+   +  A+ E    +      L       + IA+A ++L S  
Sbjct: 217 IRVNGVAP-----GVSL---LPVAMGEEEKDKWRRKVPLGRREASAEQIADAVIFLVSGS 268
Query: 243 SSYVSGQNLVVDGGFSVVN 261
           + Y++G  + VDGG S+V+
Sbjct: 269 AQYITGSIIKVDGGLSLVH 287

>pdb|2BD0|A Chain A, Chlorobium Tepidum Sepiapterin Reductase Complexed With Nadp And Sepiapterin Length = 244

Iteration: 1
 Score = 64.7 bits (156), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 66/142 (46%), Gaps = 4/142 (2%)
Query: 66  IHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIG 125
           I  DIS+  +V  L    V ++G +D + NNAG+    FG++ D  + D +  +N N  G
Sbjct: 63  ITADISDMADVRRLTTHIVERYGHIDCLVNNAGV--GRFGALSDLTEEDFDYTMNTNLKG 120
Query: 126 GFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYG 185
            F   +    +M  Q  G I F  S     A   S  Y +SK+G  GLV+ +     +  
Sbjct: 121 TFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKCN 180
Query: 186 IRVNCVSPYGLATGMSMKGGVD 207
           +R+  V P  + T   M G VD
Sbjct: 181 VRITDVQPGAVYT--PMWGKVD 200

>pdb|3IJR|A Chain A, 2.05 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad+ Length = 291

Iteration: 1
 Score = 64.3 bits (155), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 107/232 (46%), Gaps = 16/232 (6%)
Query: 35  FHENGAKVVIADVQDKLGE-----DLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGK 89
           F + GA + IA + D+ G+        +K G     +  D+S+E    ++V   V + G 
Sbjct: 67  FAKEGANIAIAYL-DEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGS 125
Query: 90  LDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTA 149
           L+I+ NN        G    T +  LE+   +N    F   K A   +  +Q   I+ TA
Sbjct: 126 LNILVNNVAQQYPQQGLEYITAE-QLEKTFRINIFSYFHVTKAALSHL--KQGDVIINTA 182
Query: 150 SACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPA 209
           S            Y+ +K  I+   + L+  L Q GIRVN V+P  + T +     +  +
Sbjct: 183 SIVAYEGNETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPL-----IPSS 237
Query: 210 LIESSMSQMG-NLKGEFL-KTDGIANAALYLASDESSYVSGQNLVVDGGFSV 259
             E  +SQ G N+  +   +   +A A +YLAS +SSYV+GQ + V+GG  V
Sbjct: 238 FDEKKVSQFGSNVPXQRPGQPYELAPAYVYLASSDSSYVTGQXIHVNGGVIV 289

>pdb|2WD7|A Chain A, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Complex With Nadp And Ddd00066750 Length = 268

Iteration: 1
 Score = 63.9 bits (154), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 108/259 (41%), Gaps = 46/259 (17%)
Query: 35  FHENGAKVVI-----ADVQDKLGEDLADKLGQDVCYIHCDISNE-------DEVINLVDT 82
            H+ G +VVI     A+    L ++L  +          D++N        +E+IN   +
Sbjct: 23  LHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIIN---S 79
Query: 83  AVSKFGKLDIMYNNAGIL-----------DRSFGSILDTPKSDLERLINVNTIGGFLGAK 131
               FG+ D++ NNA              D S G  ++T    +  LI  N I  FL   
Sbjct: 80  CFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVET---QVAELIGTNAIAPFLLTM 136
Query: 132 HAARVMVPQQKGC------ILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYG 185
             A+        C      I+    A  +   +    Y + K+ ++GL +  A EL  YG
Sbjct: 137 SFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHALVGLTQSAALELAPYG 196
Query: 186 IRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGN---LKGEFLKTDGIANAALYLASDE 242
           IRVN     G+A G+S+   +  A+ E    +      L       + IA+A ++L S  
Sbjct: 197 IRVN-----GVAPGVSL---LPVAMGEEEKDKWRRKVPLGRREASAEQIADAVIFLVSGS 248
Query: 243 SSYVSGQNLVVDGGFSVVN 261
           + Y++G  + VDGG S+V+
Sbjct: 249 AQYITGSIIKVDGGLSLVH 267

>pdb|3JQ7|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine (Dx2) Length = 288

Iteration: 1
 Score = 63.9 bits (154), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 108/259 (41%), Gaps = 46/259 (17%)
Query: 35  FHENGAKVVI-----ADVQDKLGEDLADKLGQDVCYIHCDISNE-------DEVINLVDT 82
            H+ G +VVI     A+    L ++L  +          D++N        +E+IN   +
Sbjct: 43  LHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVXQADLTNSNVLPASCEEIIN---S 99
Query: 83  AVSKFGKLDIMYNNAGIL-----------DRSFGSILDTPKSDLERLINVNTIGGFLGAK 131
               FG+ D++ NNA              D S G  ++T    +  LI  N I  FL   
Sbjct: 100 CFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVET---QVAELIGTNAIAPFLLTM 156
Query: 132 HAARVMVPQQKGC------ILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYG 185
             A+        C      I+    A  +   +    Y + K+ ++GL +  A EL  YG
Sbjct: 157 SFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHALVGLTQSAALELAPYG 216
Query: 186 IRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGN---LKGEFLKTDGIANAALYLASDE 242
           IRVN V+P     G+S+   +  A+ E    +      L       + IA+A ++L S  
Sbjct: 217 IRVNGVAP-----GVSL---LPVAMGEEEKDKWRRKVPLGRREASAEQIADAVIFLVSGS 268
Query: 243 SSYVSGQNLVVDGGFSVVN 261
           + Y++G  + VDGG S+V+
Sbjct: 269 AQYITGSIIKVDGGLSLVH 287

>pdb|3BMC|B Chain B, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Substrate (Folate) Length = 288

Iteration: 1
 Score = 63.9 bits (154), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 108/259 (41%), Gaps = 46/259 (17%)
Query: 35  FHENGAKVVI-----ADVQDKLGEDLADKLGQDVCYIHCDISNE-------DEVINLVDT 82
            H+ G +VVI     A+    L ++L  +          D++N        +E+IN   +
Sbjct: 43  LHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIIN---S 99
Query: 83  AVSKFGKLDIMYNNAGIL-----------DRSFGSILDTPKSDLERLINVNTIGGFLGAK 131
               FG+ D++ NNA              D S G  ++T    +  LI  N I  FL   
Sbjct: 100 CFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVET---QVAELIGTNAIAPFLLTM 156
Query: 132 HAARVMVPQQKGC------ILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYG 185
             A+        C      I+    A  +   +    Y + K+ ++GL +  A EL  YG
Sbjct: 157 SFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHALVGLTQSAALELAPYG 216
Query: 186 IRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGN---LKGEFLKTDGIANAALYLASDE 242
           IRVN     G+A G+S+   +  A+ E    +      L       + IA+A ++L S  
Sbjct: 217 IRVN-----GVAPGVSL---LPVAMGEEEKDKWRRKVPLGRREASAEQIADAVIFLVSGS 268
Query: 243 SSYVSGQNLVVDGGFSVVN 261
           + Y++G  + VDGG S+V+
Sbjct: 269 AQYITGSIIKVDGGLSLVH 287

>pdb|2WD7|B Chain B, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Complex With Nadp And Ddd00066750 Length = 268

Iteration: 1
 Score = 63.9 bits (154), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 108/259 (41%), Gaps = 46/259 (17%)
Query: 35  FHENGAKVVI-----ADVQDKLGEDLADKLGQDVCYIHCDISNE-------DEVINLVDT 82
            H+ G +VVI     A+    L ++L  +          D++N        +E+IN   +
Sbjct: 23  LHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVXQADLTNSNVLPASCEEIIN---S 79
Query: 83  AVSKFGKLDIMYNNAGIL-----------DRSFGSILDTPKSDLERLINVNTIGGFLGAK 131
               FG+ D++ NNA              D S G  ++T    +  LI  N I  FL   
Sbjct: 80  CFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVET---QVAELIGTNAIAPFLLTM 136
Query: 132 HAARVMVPQQKGC------ILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYG 185
             A+        C      I+    A  +   +    Y + K+ ++GL +  A EL  YG
Sbjct: 137 SFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHALVGLTQSAALELAPYG 196
Query: 186 IRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGN---LKGEFLKTDGIANAALYLASDE 242
           IRVN     G+A G+S+   +  A+ E    +      L       + IA+A ++L S  
Sbjct: 197 IRVN-----GVAPGVSL---LPVAMGEEEKDKWRRKVPLGRREASAEQIADAVIFLVSGS 248
Query: 243 SSYVSGQNLVVDGGFSVVN 261
           + Y++G  + VDGG S+V+
Sbjct: 249 AQYITGSIIKVDGGLSLVH 267

>pdb|1XKQ|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF Unknown Function From Caenorhabditis Elegans With Cofactor Length = 280

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 116/245 (47%), Gaps = 22/245 (8%)
Query: 34  LFHENGAKVVIADVQDKLGEDLAD---KLG---QDVCYIHCDISNEDEVINLVDTAVSKF 87
           LF + GA V I     +  E+      K G   + V  +  D++ ED    ++++ + +F
Sbjct: 25  LFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF 84
Query: 88  GKLDIMYNNAG-ILDRSFGSILDTPKSDL-ERLINVNTIGGFLGAKHAARVMVPQQKGCI 145
           GK+D++ NNAG  +  +FG+       D+  + + +N +   +      +  +   KG I
Sbjct: 85  GKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLN-LQAVIEMTKKVKPHLVASKGEI 143
Query: 146 LFTASACTEIAGLGSPA----YTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMS 201
           +  +S    +AG  +      Y I+K  +    +  A +L ++GIRVN VSP  + TG +
Sbjct: 144 VNVSSI---VAGPQAQPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFT 200
Query: 202 MKGGVDPALIESSMSQMGNLK-----GEFLKTDGIANAALYLASDE-SSYVSGQNLVVDG 255
              G+     +   + M + K     G   K + IAN  L+LA    S Y+ GQ++V DG
Sbjct: 201 NAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIILFLADRNLSFYILGQSIVADG 260
Query: 256 GFSVV 260
           G S+V
Sbjct: 261 GTSLV 265

>pdb|3V2G|A Chain A, Crystal Structure Of A DehydrogenaseREDUCTASE FROM SINORHIZOBIUM Meliloti 1021 Length = 271

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 91/202 (45%), Gaps = 12/202 (5%)
Query: 57  DKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLE 116
           ++ G     I  D  + + +   +   V   G LDI+ N+AGI   +   + +T  +D +
Sbjct: 77  EQAGGRAVAIRADNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSA--PLEETTVADFD 134
Query: 117 RLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGL-GSPAYTISKYGILGLVK 175
            +  VN    F+  + A+R +     G I+   S   E+    G   Y+ SK  + GL K
Sbjct: 135 EVXAVNFRAPFVAIRSASRHL--GDGGRIITIGSNLAELVPWPGISLYSASKAALAGLTK 192
Query: 176 CLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNL-KGEFLKTDGIANA 234
            LA +LG  GI VN V P       S     +PA  + + +Q   +  G + +   IA  
Sbjct: 193 GLARDLGPRGITVNIVHP------GSTDTDXNPADGDHAEAQRERIATGSYGEPQDIAGL 246
Query: 235 ALYLASDESSYVSGQNLVVDGG 256
             +LA  +  +V+G +L +DGG
Sbjct: 247 VAWLAGPQGKFVTGASLTIDGG 268

>pdb|3I3O|A Chain A, 2.06 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad-acetone Length = 291

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 67/234 (28%), Positives = 107/234 (45%), Gaps = 20/234 (8%)
Query: 35  FHENGAKVVIADVQDKLGE-----DLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGK 89
           F + GA + IA + D+ G+        +K G     +  D+S+E    ++V   V + G 
Sbjct: 67  FAKEGANIAIAYL-DEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGS 125
Query: 90  LDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTA 149
           L+I+ NN        G    T +  LE+   +N    F   K A   +  +Q   I+ TA
Sbjct: 126 LNILVNNVAQQYPQQGLEYITAE-QLEKTFRINIFSYFHVTKAALSHL--KQGDVIINTA 182
Query: 150 SACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPA 209
           S            Y+ +K  I+   + L+  L Q GIRVN V+P  + T +     +  +
Sbjct: 183 SIVAYEGNETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPL-----IPSS 237
Query: 210 LIESSMSQMGNLKGEFLKTDG----IANAALYLASDESSYVSGQNLVVDGGFSV 259
             E  +SQ G+     ++  G    +A A +YLAS +SSYV+GQ + V+GG  V
Sbjct: 238 FDEKKVSQFGS--NVPMQRPGQPYELAPAYVYLASSDSSYVTGQMIHVNGGVIV 289

>pdb|3I4F|A Chain A, Structure Of Putative 3-oxoacyl-reductase From Bacillus Thuringiensis Length = 264

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/207 (24%), Positives = 94/207 (45%), Gaps = 22/207 (10%)
Query: 65  YIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAG--ILDRSFGSILDTPKSDLERLINVN 122
           ++  D++ ++++  +V+ A+S FGK+D + NNAG  + +R    ++D  + +   +I  N
Sbjct: 61  FVQADVTKKEDLHKIVEEAMSHFGKIDFLINNAGPYVFERK--KLVDYEEDEWNEMIQGN 118
Query: 123 TIGGFLGAKHAARVMVPQQKGCILFTASACTEIA--GLGSPAYTISKYGILGLVKCLAAE 180
               F   K    VM  Q  G I+       + A   +   A+  +K G++ L K +A E
Sbjct: 119 LTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYRSAFAAAKVGLVSLTKTVAYE 178
Query: 181 LGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLK------GEFLKTDGIANA 234
             +YGI  N V P          G +   + E+++ +   LK      G     + IA  
Sbjct: 179 EAEYGITANMVCP----------GDIIGEMKEATIQEARQLKEHNTPIGRSGTGEDIART 228
Query: 235 ALYLASDESSYVSGQNLVVDGGFSVVN 261
             +L  D+S  ++G  + V G   V++
Sbjct: 229 ISFLCEDDSDMITGTIIEVTGAVDVIH 255

>pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp Length = 273

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 96/209 (45%), Gaps = 35/209 (16%)
Query: 68  CDISNEDEVINLVDTAVSKF-GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGG 126
           CD+ +  E   L+ T    F GKL+I+ NNAG++      I    K   E+  N+     
Sbjct: 77  CDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVV------IHKEAKDFTEKDYNIIMGTN 130
Query: 127 FLGAKHAARVMVP----QQKGCILFTASACTEIAGLGS-PA---YTISKYGILGLVKCLA 178
           F  A H +++  P     Q G ++F +S    IAG  + P+   Y+ SK  I  + K LA
Sbjct: 131 FEAAYHLSQIAYPLLKASQNGNVIFLSS----IAGFSALPSVSLYSASKGAINQMTKSLA 186
Query: 179 AELGQYGIRVNCVSPYGLATGM---------SMKGGVDPALIESSMSQMGNLKGEFLKTD 229
            E  +  IRVN V+P  + T +           K  +D  ++++ M + G       K  
Sbjct: 187 CEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAG-------KPQ 239
Query: 230 GIANAALYLASDESSYVSGQNLVVDGGFS 258
            ++    +L    +SY++GQ +  DGGF+
Sbjct: 240 EVSALIAFLCFPAASYITGQIIWADGGFT 268

>pdb|1XQ1|A Chain A, X-Ray Structure Of Putative Tropinone Reducatse From Arabidopsis Thaliana Gene At1g07440 Length = 266

Iteration: 1
 Score = 62.4 bits (150), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 57/197 (28%), Positives = 92/197 (46%), Gaps = 14/197 (7%)
Query: 68  CDISNEDEVINLVDTAVSKFG-KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGG 126
           CD S   E   L+ T  S FG KLDI+ NN G +       LD    D    I+ N    
Sbjct: 70  CDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSK--PTLDYTAEDFSFHISTN---- 123
Query: 127 FLGAKHAARVMVP--QQKGC--ILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELG 182
              A H +++  P  +  GC  I+F +S    ++      Y+ +K  +  L + LA E  
Sbjct: 124 LESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWA 183
Query: 183 QYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDE 242
             GIR N V+P  +AT ++ +   D    +  +S+     G F + + +++   +L    
Sbjct: 184 SDGIRANAVAPAVIATPLA-EAVYDDEFKKVVISR--KPLGRFGEPEEVSSLVAFLCMPA 240
Query: 243 SSYVSGQNLVVDGGFSV 259
           +SY++GQ + VDGG +V
Sbjct: 241 ASYITGQTICVDGGLTV 257

>pdb|1W73|A Chain A, Binary Structure Of Human Decr Solved By Semet Sad. Length = 302

Iteration: 1
 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 102/234 (43%), Gaps = 22/234 (9%)
Query: 39  GAKVVIA----DVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMY 94
           GA+ VIA    DV     E ++ + G  V  I CD+ + D V N V   +   G  +I+ 
Sbjct: 50  GAQCVIASRKXDVLKATAEQISSQTGNKVHAIQCDVRDPDXVQNTVSELIKVAGHPNIVI 109
Query: 95  NNAGILDRSFGSILDTPKSDL-----ERLINVNTIGGFLGAKHAARVMVPQQKGCILFTA 149
           NNA       G+ + +P   L     + + ++   G         + ++  QKG    + 
Sbjct: 110 NNAA------GNFI-SPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSI 162
Query: 150 SACTEIAGLGSPAYTIS-KYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDP 208
           +      G G    + S K G+    K LAAE G+YG R N + P  + T  +    +DP
Sbjct: 163 TTIYAETGSGFVVPSASAKAGVEAXSKSLAAEWGKYGXRFNVIQPGPIKTKGAF-SRLDP 221
Query: 209 A-LIESSMSQMGNLK-GEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVV 260
               E     +G +  G     + +AN A +L SD +S+++G  +  DGG  V+
Sbjct: 222 TGTFEKEX--IGRIPCGRLGTVEELANLAAFLCSDYASWINGAVIKFDGGEEVL 273

>pdb|3KVO|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Hydroxysteroid Dehydrogenase Like 2 (Hsdl2) Length = 346

Iteration: 1
 Score = 62.0 bits (149), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 90/201 (44%), Gaps = 44/201 (21%)
Query: 69  DISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFL 128
           D+ +E ++   V+ A+ KFG +DI+ NNA  +  S  + LDTP   L+ ++NVNT G +L
Sbjct: 109 DVRDEQQISAAVEKAIKKFGGIDILVNNASAI--SLTNTLDTPTKRLDLMMNVNTRGTYL 166
Query: 129 GAKHAARVMVPQQKGCILF-TASACTEIAGLGSP------------AYTISKYGILGLVK 175
            +           K CI +   S    I  +  P            AYTI+KYG+   V 
Sbjct: 167 AS-----------KACIPYLKKSKVAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYVL 215
Query: 176 CLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMG--NLKGEFLKTDGIAN 233
            +A E  +  I VN + P               A+  ++M  +G   ++ +  K D IA+
Sbjct: 216 GMAEEF-KGEIAVNALWP-------------KTAIHTAAMDMLGGPGIESQCRKVDIIAD 261
Query: 234 AALYLASDESSYVSGQNLVVD 254
           AA  +     S+    N V+D
Sbjct: 262 AAYSIFQKPKSFTG--NFVID 280

>pdb|2B4Q|A Chain A, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex Length = 276

Iteration: 1
 Score = 61.6 bits (148), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 63/259 (24%), Positives = 109/259 (42%), Gaps = 13/259 (5%)
Query: 9   PFKRLEGKVXXXXXXXXXXXXXXVELFHENGAKVVIADVQDKLGEDLADKLGQ--DVCYI 66
           P+  L G++               +   E GA+V I     +   D A +L    D   I
Sbjct: 23  PYFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAI 82
Query: 67  HCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDT-PKSDLERLINVNTIG 125
             D+S+E     L         +LDI+ NNAG    S+G+ L++ P S  E+++ +N   
Sbjct: 83  PADLSSEAGARRLAQALGELSARLDILVNNAGT---SWGAALESYPVSGWEKVMQLNVTS 139
Query: 126 GFLGAKHAA---RVMVPQQKGCILFTASACTEIAGLGSPAYTI--SKYGILGLVKCLAAE 180
            F   +      R     +    +    +   I+ +G  AY    SK  +  L + LA E
Sbjct: 140 VFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPSKAALHQLSRMLAKE 199
Query: 181 LGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLAS 240
           L    I VN ++P    + M+     DP  +E+  + +    G + + + +A  A+ LA 
Sbjct: 200 LVGEHINVNVIAPGRFPSRMTRHIANDPQALEADSASIP--MGRWGRPEEMAALAISLAG 257
Query: 241 DESSYVSGQNLVVDGGFSV 259
              +Y++G  + +DGGF +
Sbjct: 258 TAGAYMTGNVIPIDGGFHL 276

>pdb|2GDZ|A Chain A, Crystal Structure Of 15-Hydroxyprostaglandin Dehydrogenase Type1, Complexed With Nad+ Length = 267

Iteration: 1
 Score = 61.2 bits (147), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 84/188 (44%), Gaps = 36/188 (19%)
Query: 39  GAKVVIADVQDKLGEDLADKLG-----QDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM 93
           GAKV + D   + G      L      Q   +I CD++++ ++ +     V  FG+LDI+
Sbjct: 31  GAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGRLDIL 90
Query: 94  YNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ--KGCILFTASA 151
            NNAG+            + + E+ + +N +    G       M  Q   +G I+   S+
Sbjct: 91  VNNAGV----------NNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSS 140
Query: 152 CTEIAGL----GSPAYTISKYGILGLVK--CLAAELGQYGIRVNCVSPYGLATGMSMKGG 205
              +AGL      P Y  SK+GI+G  +   LAA L   G+R+N + P          G 
Sbjct: 141 ---LAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICP----------GF 187
Query: 206 VDPALIES 213
           V+ A++ES
Sbjct: 188 VNTAILES 195

>pdb|2JAP|A Chain A, Clavulanic Acid Dehydrogenase: Structural And Biochemical Analysis Of The Final Step In The Biosynthesis Of The Beta- Lactamase Inhibitor Clavulanic Acid Length = 247

Iteration: 1
 Score = 61.2 bits (147), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 87/194 (44%), Gaps = 21/194 (10%)
Query: 51  LGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDT 110
           LG++L    G  V  +  D+++   V   V + V   G LDI+ NNAGI+    G + D 
Sbjct: 47  LGDELT-AAGAKVHVLELDVADRQGVDAAVASTVEALGGLDILVNNAGIM--LLGPVEDA 103
Query: 111 PKSDLERLINVNTIGGFLGAKHAARVMVP---QQKGCILFTASACTEIAGLGSPAYTISK 167
             +D  R+I+ N     LG  +  R  +P   + KG ++  +S    +    +  Y  +K
Sbjct: 104 DTTDWTRMIDTN----LLGLMYMTRAALPHLLRSKGTVVQMSSIAGRVNVRNAAVYQATK 159
Query: 168 YGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPA----LIESSMSQMGNLKG 223
           +G+    + L  E+ + G+RV  + P    T   ++G +       + E  +SQ+  L+ 
Sbjct: 160 FGVNAFSETLRQEVTERGVRVVVIEPG--TTDTELRGHITHTATKEMYEQRISQIRKLQA 217
Query: 224 EFLKTDGIANAALY 237
           +      IA A  Y
Sbjct: 218 Q-----DIAEAVRY 226

>pdb|3SJU|A Chain A, Hedamycin Polyketide Ketoreductase Bound To Nadph Length = 279

Iteration: 1
 Score = 60.8 bits (146), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 93/207 (44%), Gaps = 11/207 (5%)
Query: 60  GQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLI 119
           G DV    CD+++ DEV   V  AV +FG + I+ N+AG      G   D   +    ++
Sbjct: 72  GHDVDGSSCDVTSTDEVHAAVAAAVERFGPIGILVNSAG--RNGGGETADLDDALWADVL 129
Query: 120 NVNTIGGFLGAKHAARV--MVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCL 177
           + N  G F   +   R   M     G I+  AS   +   + +  YT SK+G++G  K +
Sbjct: 130 DTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHGVVGFTKSV 189
Query: 178 AAELGQYGIRVNCVSPYGLATGMSMK----GGVDPALIESSMSQMGNLK---GEFLKTDG 230
             EL + GI VN V P  + T M+ +          + E  + +  N K   G +   + 
Sbjct: 190 GFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTPEE 249
Query: 231 IANAALYLASDESSYVSGQNLVVDGGF 257
           +A    YL +D ++ ++ Q L V GG 
Sbjct: 250 VAGLVGYLVTDAAASITAQALNVCGGL 276

>pdb|4FC6|A Chain A, Studies On Dcr Shed New Light On Peroxisomal Beta-Oxidation: Crystal Structure Of The Ternary Complex Of Pdcr Length = 277

Iteration: 1
 Score = 60.8 bits (146), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 69/249 (27%), Positives = 113/249 (45%), Gaps = 37/249 (14%)
Query: 33  ELFHENGAKVVIADVQDK----LGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFG 88
           E+F  +G   VIA             LA   G+    +  D+     V+  VD A+ +FG
Sbjct: 45  EIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFG 104
Query: 89  KLDIMYNNAGILDRSFGSILDTPKSDL-----ERLINVNTIGGFLGAKHAARVMVP---Q 140
           ++DI+ N A       G+ L  P   L     + +++++T G F    + +RV+     +
Sbjct: 105 RIDILINCAA------GNFL-CPAGALSFNAFKTVMDIDTSGTF----NVSRVLYEKFFR 153
Query: 141 QKGCILFTASACTEIAGLGSPAYTIS-KYGILGLVKCLAAELGQYGIRVNCVSPYGLA-- 197
             G ++   +A     G     +  S K  +  + + LA E G   IRVN ++P  ++  
Sbjct: 154 DHGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGT 213
Query: 198 TGMSMKGGVDPAL----IESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVV 253
            G+   GG   +L      S + ++GN      KT+ IA++ LYLAS  +SYV+G  LV 
Sbjct: 214 EGLRRLGGPQASLSTKVTASPLQRLGN------KTE-IAHSVLYLASPLASYVTGAVLVA 266
Query: 254 DGGFSVVNP 262
           DGG  +  P
Sbjct: 267 DGGAWLTFP 275

>pdb|4IIU|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Escherichia Coli Strain Cft073 Complexed With Nadp+ At 2.1 A Resolution Length = 267

Iteration: 1
 Score = 60.5 bits (145), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 97/193 (50%), Gaps = 14/193 (7%)
Query: 69  DISNEDEVINLVDTAVSKFGKLDIMYNNAGIL-DRSFGSILDTPKSDLERLINVNTIGGF 127
           D++N ++   +++  +++ G    + +NAGI  D +F ++      D + +I+ N    +
Sbjct: 84  DVANREQCREVLEHEIAQHGAWYGVVSNAGIARDAAFPAL---SNDDWDAVIHTNLDSFY 140
Query: 128 LGAKHAARVMVPQQKGCILFTASACTEIAG-LGSPAYTISKYGILGLVKCLAAELGQYGI 186
              +     M+  ++G  + T S+ + + G  G   Y+ +K GI+G  K LA EL +  I
Sbjct: 141 NVIQPCIMPMIGARQGGRIITLSSVSGVMGNRGQVNYSAAKAGIIGATKALAIELAKRKI 200
Query: 187 RVNCVSPYGLATGM--SMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESS 244
            VNC++P  + TGM    +  +  A+    M +MG       + + +A  A YL SD + 
Sbjct: 201 TVNCIAPGLIDTGMIEMEESALKEAMSMIPMKRMG-------QAEEVAGLASYLMSDIAG 253
Query: 245 YVSGQNLVVDGGF 257
           YV+ Q + ++GG 
Sbjct: 254 YVTRQVISINGGM 266

>pdb|3TL3|A Chain A, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Ulcerans Length = 257

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 84/172 (48%), Gaps = 24/172 (13%)
Query: 37  ENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNN 96
           + GA+VV+ D++   GED+   LG    +   D+++E  V + +D A    G L I+ N 
Sbjct: 31  DAGAQVVVLDIR---GEDVVADLGDRARFAAADVTDEAAVASALDLA-ETMGTLRIVVNC 86
Query: 97  AGILDRSFGSILDTPKSD-------LERLINVNTIGGF----LGAKHAARVMV----PQQ 141
           AG      G+ +     D         +++++N +G F    L A+  A+        ++
Sbjct: 87  AGT-----GNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEE 141
Query: 142 KGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSP 193
           +G I+ TAS       +G  AY+ SK G++G+   +A +L  + IRV  ++P
Sbjct: 142 RGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAP 193

>pdb|4AFN|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein) Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a Resolution Length = 269

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 97/208 (46%), Gaps = 9/208 (4%)
Query: 53  EDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILD 109
           E +A+ L   G +   +  D+S+++ V   ++      G+  I+ NNAGI   +   ++ 
Sbjct: 65  EKIAETLKANGVEGAGLVLDVSSDESVAATLEHIQQHLGQPLIVVNNAGITRDNL--LVR 122
Query: 110 TPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYG 169
               +   ++N N    +  +K   R M   + G I+   S    +   G   Y  +K G
Sbjct: 123 MKDDEWFDVVNTNLNSLYRLSKAVLRGMTKARWGRIINIGSVVGAMGNAGQTNYAAAKAG 182
Query: 170 ILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTD 229
           + G  + LA E+G   I VN V+P  + T M+ +  +  A  E+ + Q+    G   + +
Sbjct: 183 LEGFTRALAREVGSRAITVNAVAPGFIDTDMTRE--LPEAQREALLGQI--PLGRLGQAE 238
Query: 230 GIANAALYLASDESSYVSGQNLVVDGGF 257
            IA    +LASD ++YV+G  + V+GG 
Sbjct: 239 EIAKVVGFLASDGAAYVTGATVPVNGGM 266

>pdb|3U0B|A Chain A, Crystal Structure Of An Oxidoreductase From Mycobacterium Smegmatis Length = 454

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 90/208 (43%), Gaps = 35/208 (16%)
Query: 11  KRLEGKVXXXXXXXXXXXXXXVELFHENGAKVVIADVQDKLGEDL---ADKLGQDVCYIH 67
           K L+GKV               E+F  +GA VV  DV D   EDL   ADK+G     + 
Sbjct: 209 KPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDV-DGAAEDLKRVADKVGG--TALT 265
Query: 68  CDISNEDEVINLVDTAVSKFG-KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGG 126
            D++ +D V  +        G K+DI+ NNAGI      + +D  + D   +I VN    
Sbjct: 266 LDVTADDAVDKITAHVTEHHGGKVDILVNNAGITRDKLLANMDEKRWDA--VIAVN---- 319
Query: 127 FLGAKHAARVMVPQQ------------KGCILFTASACTEIAG-LGSPAYTISKYGILGL 173
                    ++ PQ+            +G  +   S+   IAG  G   Y  +K G++GL
Sbjct: 320 ---------LLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYATTKAGMIGL 370
Query: 174 VKCLAAELGQYGIRVNCVSPYGLATGMS 201
            + LA  L   GI +N V+P  + T M+
Sbjct: 371 AEALAPVLADKGITINAVAPGFIETKMT 398

>pdb|3ICC|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis At 1.87 A Resolution Length = 255

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 53/173 (30%), Positives = 85/173 (49%), Gaps = 16/173 (9%)
Query: 89  KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFT 148
           K DI+ NNAGI   +F  I +T +   +R ++VN    F   + A   +    +  I+  
Sbjct: 91  KFDILINNAGIGPGAF--IEETTEQFFDRXVSVNAKAPFFIIQQALSRLRDNSR--IINI 146
Query: 149 ASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDP 208
           +SA T I+     AY+ +K  I      LA +LG  GI VN + P  + T  + +   DP
Sbjct: 147 SSAATRISLPDFIAYSXTKGAINTXTFTLAKQLGARGITVNAILPGFVKTDXNAELLSDP 206
Query: 209 -----ALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGG 256
                A   S+ +++G       + + IA+ A +LAS +S +V+GQ + V GG
Sbjct: 207 XXKQYATTISAFNRLG-------EVEDIADTAAFLASPDSRWVTGQLIDVSGG 252

>pdb|3R3S|A Chain A, Structure Of The Ygha Oxidoreductase From Salmonella Enterica Length = 294

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 92/209 (44%), Gaps = 19/209 (9%)
Query: 55  LADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSD 114
           L ++ G+    +  D+S+E    +LV  A    G LDI+   AG    +   I D     
Sbjct: 94  LIEECGRKAVLLPGDLSDESFARSLVHKAREALGGLDILALVAG-KQTAIPEIKDLTSEQ 152
Query: 115 LERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPA---YTISKYGIL 171
            ++   VN    F   + A  ++    KG  + T S+    A   SP    Y  +K  IL
Sbjct: 153 FQQTFAVNVFALFWITQEAIPLL---PKGASIITTSSIQ--AYQPSPHLLDYAATKAAIL 207
Query: 172 GLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDG- 230
              + LA ++ + GIRVN V+P  + T + + GG      +  + Q G      +K  G 
Sbjct: 208 NYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGG----QTQDKIPQFGQQTP--MKRAGQ 261
Query: 231 ---IANAALYLASDESSYVSGQNLVVDGG 256
              +A   +YLAS ESSYV+ +   V GG
Sbjct: 262 PAELAPVYVYLASQESSYVTAEVHGVCGG 290

>pdb|1O5I|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Reductase (Tm1169) From Thermotoga Maritima At 2.50 A Resolution Length = 249

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 62/232 (26%), Positives = 100/232 (43%), Gaps = 29/232 (12%)
Query: 33  ELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDI 92
           ++  + GA+V I        E+L  + G    Y+ CD+  +      +D    K  ++DI
Sbjct: 37  DVLSQEGAEVTIC----ARNEELLKRSGHR--YVVCDLRKD------LDLLFEKVKEVDI 84
Query: 93  MYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVP--QQKGCILFTAS 150
           +  NAG     F   L     D +  I+      FL      R  +P  ++KG     A 
Sbjct: 85  LVLNAGGPKAGFFDELTN--EDFKEAID----SLFLNMIKIVRNYLPAMKEKGWGRIVAI 138
Query: 151 ACTEIAGLGSPAYTI--SKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDP 208
               +       YT   ++  + G +K L+ E+  YGI VNCV+P     G +    V  
Sbjct: 139 TSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAP-----GWTETERVKE 193
Query: 209 ALIESSMSQMGNL--KGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFS 258
            L E    Q+ +        K + IA+   +L S+++SY++GQ +VVDGG S
Sbjct: 194 LLSEEKKKQVESQIPMRRMAKPEEIASVVAFLCSEKASYLTGQTIVVDGGLS 245

>pdb|2JAH|A Chain A, Biochemical And Structural Analysis Of The Clavulanic Acid Dehydeogenase (Cad) From Streptomyces Clavuligerus Length = 247

Iteration: 1
 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 84/194 (43%), Gaps = 21/194 (10%)
Query: 51  LGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDT 110
           LG++L    G  V  +  D+++   V   V + V   G LDI+ NNAGI     G + D 
Sbjct: 47  LGDELT-AAGAKVHVLELDVADRQGVDAAVASTVEALGGLDILVNNAGIX--LLGPVEDA 103
Query: 111 PKSDLERLINVNTIGGFLGAKHAARVMVP---QQKGCILFTASACTEIAGLGSPAYTISK 167
             +D  R I+ N     LG  +  R  +P   + KG ++  +S    +    +  Y  +K
Sbjct: 104 DTTDWTRXIDTN----LLGLXYXTRAALPHLLRSKGTVVQXSSIAGRVNVRNAAVYQATK 159
Query: 168 YGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALI----ESSMSQMGNLKG 223
           +G+    + L  E+ + G+RV  + P    T   ++G +         E  +SQ+  L+ 
Sbjct: 160 FGVNAFSETLRQEVTERGVRVVVIEPG--TTDTELRGHITHTATKEXYEQRISQIRKLQA 217
Query: 224 EFLKTDGIANAALY 237
           +      IA A  Y
Sbjct: 218 Q-----DIAEAVRY 226

>pdb|2EHD|A Chain A, Crystal Structure Analysis Of Oxidoreductase Length = 234

Iteration: 1
 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 75/169 (44%), Gaps = 3/169 (1%)
Query: 33  ELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDI 92
            L H  G +V +    +K  + LA +L +    +  D+  E +    V      FG+L  
Sbjct: 23  RLLHAKGYRVGLMARDEKRLQALAAEL-EGALPLPGDVREEGDWARAVAAMEEAFGELSA 81
Query: 93  MYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASAC 152
           + NNAG+       + +    +   +++ N  G FLG +HA   ++ +  G I+   S  
Sbjct: 82  LVNNAGV--GVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLA 139
Query: 153 TEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMS 201
            +    G  AY  SK+G+LGL      +L +  +RV  V P  + TG +
Sbjct: 140 GKNPFKGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFA 188

>pdb|1YB1|A Chain A, Crystal Structure Of Human 17-Beta-Hydroxysteroid Dehydrogenase Type Xi Length = 272

Iteration: 1
 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 45/167 (26%), Positives = 73/167 (43%), Gaps = 8/167 (4%)
Query: 40  AKVVIADVQDKLGEDLADK---LGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNN 96
           +K+V+ D+     E+ A K   LG  V     D SN +++ +      ++ G + I+ NN
Sbjct: 56  SKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNN 115
Query: 97  AGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIA 156
           AG++  S   +  T    +E+   VN +  F   K     M     G I+  ASA   ++
Sbjct: 116 AGVVYTS--DLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVS 173
Query: 157 GLGSPAYTISKYGILGLVKCLAAELGQY---GIRVNCVSPYGLATGM 200
                AY  SK+  +G  K L  EL      G++  C+ P  + TG 
Sbjct: 174 VPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGF 220

>pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To Nadph And The Inhibitor Emodin Length = 281

Iteration: 1
 Score = 57.8 bits (138), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 88/206 (42%), Gaps = 25/206 (12%)
Query: 68  CDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGF 127
           CD+ +  E+  LV   V ++G +D++ NNAG L    G+  +        ++  N  G F
Sbjct: 82  CDVRSVPEIEALVAAVVERYGPVDVLVNNAGRL--GGGATAELADELWLDVVETNLTGVF 139
Query: 128 LGAKHAARV--MVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYG 185
              K   +   M+ +  G I+  AS   +   + +  Y+ SK+G++G  K L  EL + G
Sbjct: 140 RVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTG 199
Query: 186 IRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLK--------------GEFLKTDGI 231
           I VN V P  + T M+       A +    S +  +               G +++   +
Sbjct: 200 ITVNAVCPGFVETPMA-------ASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEV 252
Query: 232 ANAALYLASDESSYVSGQNLVVDGGF 257
           A    YL    ++ V+ Q L V GG 
Sbjct: 253 AEMVAYLIGPGAAAVTAQALNVCGGL 278

>pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 57.8 bits (138), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 88/206 (42%), Gaps = 25/206 (12%)
Query: 68  CDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGF 127
           CD+ +  E+  LV   V ++G +D++ NNAG L    G+  +        ++  N  G F
Sbjct: 78  CDVRSVPEIEALVAAVVERYGPVDVLVNNAGRL--GGGATAELADELWLDVVETNLTGVF 135
Query: 128 LGAKHAARV--MVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYG 185
              K   +   M+ +  G I+  AS   +   + +  Y+ SK+G++G  K L  EL + G
Sbjct: 136 RVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTG 195
Query: 186 IRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLK--------------GEFLKTDGI 231
           I VN V P  + T M+       A +    S +  +               G +++   +
Sbjct: 196 ITVNAVCPGFVETPMA-------ASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEV 248
Query: 232 ANAALYLASDESSYVSGQNLVVDGGF 257
           A    YL    ++ V+ Q L V GG 
Sbjct: 249 AEMVAYLIGPGAAAVTAQALNVCGGL 274

>pdb|3OIC|A Chain A, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From B. Subtilis (Apo Form) Length = 258

Iteration: 1
 Score = 57.8 bits (138), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 58/238 (24%), Positives = 104/238 (43%), Gaps = 28/238 (11%)
Query: 37  ENGAKVVIADVQDK-----LGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLD 91
           ENG  +VI   + K       E++ +KLG  V  +  ++    ++  +       FG+LD
Sbjct: 26  ENGYNIVINYARSKKAALETAEEI-EKLGVKVLVVKANVGQPAKIKEMFQQIDETFGRLD 84
Query: 92  IMYNNA--GILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTA 149
           +  NNA  G+L      +++  ++  +  +N+N       A+ AA++M     G I+   
Sbjct: 85  VFVNNAASGVLR----PVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIV--- 137
Query: 150 SACTEIAGLGSPAYT-------ISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSM 202
                I+ LGS  Y        +SK  +  L + LA EL    I VN VS   + T    
Sbjct: 138 ----SISSLGSIRYLENYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALK 193
Query: 203 KGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVV 260
                  L+E +  +     G  ++   + +   +L S ++  + GQ ++VDGG S++
Sbjct: 194 HFPNREDLLEDA--RQNTPAGRMVEIKDMVDTVEFLVSSKADMIRGQTIIVDGGRSLL 249

>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 57.4 bits (137), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 88/207 (42%), Gaps = 27/207 (13%)
Query: 68  CDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLE-RLINVNTIGG 126
           CD+ +  E+  LV   V ++G +D++ NNAG   R  G        +L   ++  N  G 
Sbjct: 82  CDVRSVPEIEALVAAVVERYGPVDVLVNNAG---RPGGGATAELADELWLDVVETNLTGV 138
Query: 127 FLGAKHAARV--MVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQY 184
           F   K   +   M+ +  G I+  AS   +   + +  Y+ SK+G++G  K L  EL + 
Sbjct: 139 FRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELART 198
Query: 185 GIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLK--------------GEFLKTDG 230
           GI VN V P  + T M+       A +    S +  +               G +++   
Sbjct: 199 GITVNAVCPGWVETPMA-------ASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSE 251
Query: 231 IANAALYLASDESSYVSGQNLVVDGGF 257
           +A    YL    ++ V+ Q L V GG 
Sbjct: 252 VAEMVAYLIGPGAAAVTAQALNVCGGL 278

>pdb|3M1L|A Chain A, Crystal Strucutre Of A C-Terminal Trunacted Mutant Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 2.5 Angstrom Resolution Length = 432

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 110/257 (42%), Gaps = 29/257 (11%)
Query: 11  KRLEGKVXXXXXXXXXXXXXXVELFHENGAKVVIADVQDKLGEDLAD---KLGQDVCYIH 67
           K L+GKV               E+F  +GA VV  DV+    E+LA+   K+G    ++ 
Sbjct: 193 KPLDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESA-AENLAETASKVGGTALWL- 250
Query: 68  CDISNEDEVINLVDTAVSKFG-KLDIMYNNAGILDRSFGSILDTPKSDLERLIN----VN 122
            D++ +D V  + +      G K DI+ NNAGI      + +D  + D    +N    + 
Sbjct: 251 -DVTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNLLAPLR 309
Query: 123 TIGGFLGAKHAARVMVPQQKGCILFTASACTEIAG-LGSPAYTISKYGILGLVKCLAAEL 181
              G +G            +G  +   S+   IAG  G   Y  +K G++G+ + LA  L
Sbjct: 310 LTEGLVGNGSIG-------EGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGL 362
Query: 182 GQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTD---GIANAALYL 238
              GI +N V+P  + T M+       A I  +  ++G      L+      +A A  Y 
Sbjct: 363 AAKGITINAVAPGFIETQMT-------AAIPLATREVGRRLNSLLQGGQPVDVAEAIAYF 415
Query: 239 ASDESSYVSGQNLVVDG 255
           AS  S+ V+G  + V G
Sbjct: 416 ASPASNAVTGNVIRVCG 432

>pdb|3V1T|C Chain C, Crystal Structure Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 1.9 Angstrom Resolution Length = 462

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 110/257 (42%), Gaps = 29/257 (11%)
Query: 11  KRLEGKVXXXXXXXXXXXXXXVELFHENGAKVVIADVQDKLGEDLAD---KLGQDVCYIH 67
           K L+GKV               E+F  +GA VV  DV+    E+LA+   K+G    ++ 
Sbjct: 217 KPLDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESA-AENLAETASKVGGTALWL- 274
Query: 68  CDISNEDEVINLVDTAVSKFG-KLDIMYNNAGILDRSFGSILDTPKSDLERLIN----VN 122
            D++ +D V  + +      G K DI+ NNAGI      + +D  + D    +N    + 
Sbjct: 275 -DVTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNLLAPLR 333
Query: 123 TIGGFLGAKHAARVMVPQQKGCILFTASACTEIAG-LGSPAYTISKYGILGLVKCLAAEL 181
              G +G            +G  +   S+   IAG  G   Y  +K G++G+ + LA  L
Sbjct: 334 LTEGLVGNGSIG-------EGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGL 386
Query: 182 GQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTD---GIANAALYL 238
              GI +N V+P  + T M+       A I  +  ++G      L+      +A A  Y 
Sbjct: 387 AAKGITINAVAPGFIETQMT-------AAIPLATREVGRRLNSLLQGGQPVDVAEAIAYF 439
Query: 239 ASDESSYVSGQNLVVDG 255
           AS  S+ V+G  + V G
Sbjct: 440 ASPASNAVTGNVIRVCG 456

>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 88/207 (42%), Gaps = 27/207 (13%)
Query: 68  CDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLE-RLINVNTIGG 126
           CD+ +  E+  LV   V ++G +D++ NNAG   R  G        +L   ++  N  G 
Sbjct: 82  CDVRSVPEIEALVAAVVERYGPVDVLVNNAG---RPGGGATAELADELWLDVVETNLTGV 138
Query: 127 FLGAKHAARV--MVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQY 184
           F   K   +   M+ +  G I+  AS   +   + +  Y+ SK+G++G  K L  EL + 
Sbjct: 139 FRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELART 198
Query: 185 GIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLK--------------GEFLKTDG 230
           GI VN V P  + T M+       A +    S +  +               G +++   
Sbjct: 199 GITVNAVCPGFVETPMA-------ASVREHFSDIWEVSTEEAFDRITARVPIGRYVQPSE 251
Query: 231 IANAALYLASDESSYVSGQNLVVDGGF 257
           +A    YL    ++ V+ Q L V GG 
Sbjct: 252 VAEMVAYLIGPGAAAVTAQALNVCGGL 278

>pdb|4FW8|A Chain A, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh Length = 454

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 110/257 (42%), Gaps = 29/257 (11%)
Query: 11  KRLEGKVXXXXXXXXXXXXXXVELFHENGAKVVIADVQDKLGEDLAD---KLGQDVCYIH 67
           K L+GKV               E+F  +GA VV  DV+    E+LA+   K+G    ++ 
Sbjct: 209 KPLDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESA-AENLAETASKVGGTALWL- 266
Query: 68  CDISNEDEVINLVDTAVSKFG-KLDIMYNNAGILDRSFGSILDTPKSDLERLIN----VN 122
            D++ +D V  + +      G K DI+ NNAGI      + +D  + D    +N    + 
Sbjct: 267 -DVTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNLLAPLR 325
Query: 123 TIGGFLGAKHAARVMVPQQKGCILFTASACTEIAG-LGSPAYTISKYGILGLVKCLAAEL 181
              G +G            +G  +   S+   IAG  G   Y  +K G++G+ + LA  L
Sbjct: 326 LTEGLVGNGSIG-------EGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGL 378
Query: 182 GQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTD---GIANAALYL 238
              GI +N V+P  + T M+       A I  +  ++G      L+      +A A  Y 
Sbjct: 379 AAKGITINAVAPGFIETQMT-------AAIPLATREVGRRLNSLLQGGQPVDVAEAIAYF 431
Query: 239 ASDESSYVSGQNLVVDG 255
           AS  S+ V+G  + V G
Sbjct: 432 ASPASNAVTGNVIRVCG 448

>pdb|3LLS|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Tuberculosis Length = 475

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 110/257 (42%), Gaps = 29/257 (11%)
Query: 11  KRLEGKVXXXXXXXXXXXXXXVELFHENGAKVVIADVQDKLGEDLAD---KLGQDVCYIH 67
           K L+GKV               E+F  +GA VV  DV+    E+LA+   K+G    ++ 
Sbjct: 230 KPLDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESA-AENLAETASKVGGTALWL- 287
Query: 68  CDISNEDEVINLVDTAVSKFG-KLDIMYNNAGILDRSFGSILDTPKSDLERLIN----VN 122
            D++ +D V  + +      G K DI+ NNAGI      + +D  + D    +N    + 
Sbjct: 288 -DVTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNLLAPLR 346
Query: 123 TIGGFLGAKHAARVMVPQQKGCILFTASACTEIAG-LGSPAYTISKYGILGLVKCLAAEL 181
              G +G            +G  +   S+   IAG  G   Y  +K G++G+ + LA  L
Sbjct: 347 LTEGLVGNGSIG-------EGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGL 399
Query: 182 GQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTD---GIANAALYL 238
              GI +N V+P  + T M+       A I  +  ++G      L+      +A A  Y 
Sbjct: 400 AAKGITINAVAPGFIETQMT-------AAIPLATREVGRRLNSLLQGGQPVDVAEAIAYF 452
Query: 239 ASDESSYVSGQNLVVDG 255
           AS  S+ V+G  + V G
Sbjct: 453 ASPASNAVTGNVIRVCG 469

>pdb|3Q6I|A Chain A, Crystal Structure Of Fabg4 And Coenzyme Binary Complex Length = 446

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 110/257 (42%), Gaps = 29/257 (11%)
Query: 11  KRLEGKVXXXXXXXXXXXXXXVELFHENGAKVVIADVQDKLGEDLAD---KLGQDVCYIH 67
           K L+GKV               E+F  +GA VV  DV+    E+LA+   K+G    ++ 
Sbjct: 201 KPLDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESA-AENLAETASKVGGTALWL- 258
Query: 68  CDISNEDEVINLVDTAVSKFG-KLDIMYNNAGILDRSFGSILDTPKSDLERLIN----VN 122
            D++ +D V  + +      G K DI+ NNAGI      + +D  + D    +N    + 
Sbjct: 259 -DVTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNLLAPLR 317
Query: 123 TIGGFLGAKHAARVMVPQQKGCILFTASACTEIAG-LGSPAYTISKYGILGLVKCLAAEL 181
              G +G            +G  +   S+   IAG  G   Y  +K G++G+ + LA  L
Sbjct: 318 LTEGLVGNGSIG-------EGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGL 370
Query: 182 GQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTD---GIANAALYL 238
              GI +N V+P  + T M+       A I  +  ++G      L+      +A A  Y 
Sbjct: 371 AAKGITINAVAPGFIETQMT-------AAIPLATREVGRRLNSLLQGGQPVDVAEAIAYF 423
Query: 239 ASDESSYVSGQNLVVDG 255
           AS  S+ V+G  + V G
Sbjct: 424 ASPASNAVTGNVIRVCG 440

>pdb|3PJF|A Chain A, Structure Of Enr G93v Mutant-Nad+-Triclosan Complex Length = 270

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 114/242 (47%), Gaps = 29/242 (11%)
Query: 33  ELFHENGAKVVIADVQDKLG---EDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGK 89
           +  H  GA++      DKL    E+ A +LG D+  + CD++ ED  I   DT  ++ GK
Sbjct: 26  QAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIV-LQCDVA-EDASI---DTMFAELGK 80
Query: 90  LDIMYNNAGILDRSFGSILDTPKSDLE-RLINVNTIGGF-LGAKHAARVMVPQQKGC--I 145
           +   +      D    SI+  P   L+   +N  T  GF +    ++   V   K C  +
Sbjct: 81  VWPKF------DGFVHSIVFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSM 134
Query: 146 LFTASACTEIAGLGSPAYTISKYGILGL--------VKCLAAELGQYGIRVNCVSPYGLA 197
           L   SA   ++ LG+    I  Y ++GL        V+ +A  +G  G+RVN +S   + 
Sbjct: 135 LNPGSALLTLSYLGAE-RAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIR 193
Query: 198 TGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGF 257
           T ++  G  D   + +    +  ++   +  + + N+A +L SD S+ +SG+ + VDGGF
Sbjct: 194 T-LAASGIKDFRKMLAHCEAVTPIR-RTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGF 251
Query: 258 SV 259
           S+
Sbjct: 252 SI 253

>pdb|3GED|A Chain A, Fingerprint And Structural Analysis Of A Apo Scor Enzyme From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/225 (26%), Positives = 103/225 (45%), Gaps = 17/225 (7%)
Query: 35  FHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMY 94
           F E G KV   D+ +K   D A K   ++ Y H D+++   +   V+ A+ K  ++D++ 
Sbjct: 22  FLEAGDKVCFIDIDEKRSADFA-KERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLV 80
Query: 95  NNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTE 154
           NNA     S G +      + + +++V     +  ++   R  + + KG I+  AS    
Sbjct: 81  NNA--CRGSKGILSSLLYEEFDYILSVGLKAPYELSR-LCRDELIKNKGRIINIASTRAF 137
Query: 155 IAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGL-ATGMSMKGGVDPALIES 213
            +   S AY  +K GI+ L   LA  LG   + VNC++P  +  T        D A I +
Sbjct: 138 QSEPDSEAYASAKGGIVALTHALAMSLGP-DVLVNCIAPGWINVTEQQEFTQEDCAAIPA 196
Query: 214 SMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFS 258
                    G+      I+N  L+L   +  +++G+ ++VDGG S
Sbjct: 197 ---------GKVGTPKDISNMVLFLC--QQDFITGETIIVDGGMS 230

>pdb|4DYV|A Chain A, Crystal Structure Of A Short-Chain DehydrogenaseREDUCTASE SDR FROM Xanthobacter Autotrophicus Py2 Length = 272

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 62/130 (47%), Gaps = 13/130 (10%)
Query: 53  EDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPK 112
           ++ A ++G D   +  D+++ D V  L    V KFG++D+++NNAG    +       P 
Sbjct: 66  QETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVDVLFNNAGTGAPAI------PX 119
Query: 113 SDL-----ERLINVNTIGGFLGAKHAARVMVPQQK--GCILFTASACTEIAGLGSPAYTI 165
            DL     +++++ N  G FL  + A RV   Q+   G I+   S         S  YT 
Sbjct: 120 EDLTFAQWKQVVDTNLTGPFLCTQEAFRVXKAQEPRGGRIINNGSISATSPRPYSAPYTA 179
Query: 166 SKYGILGLVK 175
           +K+ I GL K
Sbjct: 180 TKHAITGLTK 189

>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase Length = 281

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 88/207 (42%), Gaps = 27/207 (13%)
Query: 68  CDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLE-RLINVNTIGG 126
           CD+ +  E+  LV   V ++G +D++ NNAG   R  G        +L   ++  N  G 
Sbjct: 82  CDVRSVPEIEALVAAVVERYGPVDVLVNNAG---RPGGGATAELADELWLDVVETNLTGV 138
Query: 127 FLGAKHAARV--MVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQY 184
           F   K   +   M+ +  G I+  AS   +   + +  Y+ SK+G++G  K L  EL + 
Sbjct: 139 FRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELART 198
Query: 185 GIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLK--------------GEFLKTDG 230
           GI VN V P  + T M+       A +    S +  +               G +++   
Sbjct: 199 GITVNAVCPGFVETPMA-------ASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSE 251
Query: 231 IANAALYLASDESSYVSGQNLVVDGGF 257
           +A    YL    ++ V+ Q L V GG 
Sbjct: 252 VAEMVAYLIGPGAAAVTAQALNVCGGL 278

>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp Bound Length = 261

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 88/207 (42%), Gaps = 27/207 (13%)
Query: 68  CDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLE-RLINVNTIGG 126
           CD+ +  E+  LV   V ++G +D++ NNAG   R  G        +L   ++  N  G 
Sbjct: 62  CDVRSVPEIEALVAAVVERYGPVDVLVNNAG---RPGGGATAELADELWLDVVETNLTGV 118
Query: 127 FLGAKHAARV--MVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQY 184
           F   K   +   M+ +  G I+  AS   +   + +  Y+ SK+G++G  K L  EL + 
Sbjct: 119 FRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELART 178
Query: 185 GIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLK--------------GEFLKTDG 230
           GI VN V P  + T M+       A +    S +  +               G +++   
Sbjct: 179 GITVNAVCPGFVETPMA-------ASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSE 231
Query: 231 IANAALYLASDESSYVSGQNLVVDGGF 257
           +A    YL    ++ V+ Q L V GG 
Sbjct: 232 VAEMVAYLIGPGAAAVTAQALNVCGGL 258

>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 88/207 (42%), Gaps = 27/207 (13%)
Query: 68  CDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLE-RLINVNTIGG 126
           CD+ +  E+  LV   V ++G +D++ NNAG   R  G        +L   ++  N  G 
Sbjct: 78  CDVRSVPEIEALVAAVVERYGPVDVLVNNAG---RPGGGATAELADELWLDVVETNLTGV 134
Query: 127 FLGAKHAARV--MVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQY 184
           F   K   +   M+ +  G I+  AS   +   + +  Y+ SK+G++G  K L  EL + 
Sbjct: 135 FRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELART 194
Query: 185 GIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLK--------------GEFLKTDG 230
           GI VN V P  + T M+       A +    S +  +               G +++   
Sbjct: 195 GITVNAVCPGFVETPMA-------ASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSE 247
Query: 231 IANAALYLASDESSYVSGQNLVVDGGF 257
           +A    YL    ++ V+ Q L V GG 
Sbjct: 248 VAEMVAYLIGPGAAAVTAQALNVCGGL 274

>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 88/207 (42%), Gaps = 27/207 (13%)
Query: 68  CDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLE-RLINVNTIGG 126
           CD+ +  E+  LV   V ++G +D++ NNAG   R  G        +L   ++  N  G 
Sbjct: 82  CDVRSVPEIEALVAAVVERYGPVDVLVNNAG---RPGGGATAELADELWLDVVETNLTGV 138
Query: 127 FLGAKHAARV--MVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQY 184
           F   K   +   M+ +  G I+  AS   +   + +  Y+ SK+G++G  K L  EL + 
Sbjct: 139 FRVTKQVLKAGGMLERGTGRIVNIASTGGKQGLVHAAPYSASKHGVVGFTKALGLELART 198
Query: 185 GIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLK--------------GEFLKTDG 230
           GI VN V P  + T M+       A +    S +  +               G +++   
Sbjct: 199 GITVNAVCPGFVETPMA-------ASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSE 251
Query: 231 IANAALYLASDESSYVSGQNLVVDGGF 257
           +A    YL    ++ V+ Q L V GG 
Sbjct: 252 VAEMVAYLIGPGAAAVTAQALNVCGGL 278

>pdb|3IOY|A Chain A, Structure Of Putative Short-Chain Dehydrogenase (Saro_0793) From Novosphingobium Aromaticivorans Length = 319

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 78/167 (46%), Gaps = 13/167 (7%)
Query: 38  NGAKVVIADV-QDKLGEDLA----DKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDI 92
            G KV IAD+ QD + + LA    +  G +V  +  D+++ +      D   ++FG + I
Sbjct: 31  QGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFGPVSI 90
Query: 93  MYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGA-----KHAARVMVPQQKGCILF 147
           + NNAG+    F  I ++   D + L+ VN  G   G      +   RV   +QKG  + 
Sbjct: 91  LCNNAGV--NLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVV 148
Query: 148 TASACTEIAGLGSPA-YTISKYGILGLVKCLAAELGQYGIRVNCVSP 193
             ++       GSP  Y  +K+ + GL + L   L +Y I V+ + P
Sbjct: 149 NTASMAAFLAAGSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCP 195

>pdb|4ALI|A Chain A, Crystal Structure Of S. Aureus Fabi In Complex With Nadp And Triclosan (P1) Length = 282

Iteration: 1
 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 109/239 (45%), Gaps = 32/239 (13%)
Query: 39  GAKVVIA---DVQDKLGEDLADKLGQDVCYIH-CDISNEDEVINLVDTAVSKFGKLDIMY 94
           GAK+V     +   K  E L ++L Q   +++  D+ +++EVIN       + GK     
Sbjct: 58  GAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVIN----GFEQIGK----- 108
Query: 95  NNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAK-----------HAARVMVPQQKG 143
            + G +D  + SI      DL    +  +  GFL A+           H A+ ++P+  G
Sbjct: 109 -DVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPE-GG 166
Query: 144 CILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMK 203
            I+ T     E A        ++K  +   VK LA +LG   IRVN +S   + T +S K
Sbjct: 167 SIVATTYLGGEFAVQNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRT-LSAK 225
Query: 204 G--GVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVV 260
           G  G +  L E  + +   LK    + + +   A YL SD SS V+G+N+ VD GF  +
Sbjct: 226 GVGGFNTILKE--IEERAPLKRNVDQVE-VGKTAAYLLSDLSSGVTGENIHVDSGFHAI 281

>pdb|2YW9|A Chain A, Crystal Structure Of Tt0143 From Thermus Thermophilus Hb8 Length = 261

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 56/236 (23%), Positives = 104/236 (44%), Gaps = 20/236 (8%)
Query: 35  FHENGAKVVIADVQDKL---GEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLD 91
             E GA+V ++   ++L    E LA+ LG  + +   D++ ++E+  L       FG LD
Sbjct: 30  LKEAGAEVALSYQAERLRPEAEKLAEALGGALLF-RADVTQDEELDALFAGVKEAFGGLD 88
Query: 92  IMYNNAGILDRSF--GSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTA 149
            + +      R    G  +DT + D    + V+     +     A  ++ +  G +  T 
Sbjct: 89  YLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYS-LVAVARRAEPLLREGGGIVTLTY 147
Query: 150 SACTEIAGLGSPAY---TISKYGILGLVKCLAAELGQYGIRVNCVS--PYGLATGMSMKG 204
            A  ++     P Y    I+K  +   V+ LA ELG  G+RVN +S  P       S+ G
Sbjct: 148 YASEKVV----PKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPG 203
Query: 205 GVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVV 260
                 +   ++Q   L+    + + + N  L+L S  +S ++G+ + VD G+ ++
Sbjct: 204 FTK---MYDRVAQTAPLRRNITQEE-VGNLGLFLLSPLASGITGEVVYVDAGYHIM 255

>pdb|3GNT|A Chain A, Crystal Structure Of The Staphylococcus Aureus Enoyl-Acyl Carrier Protein Reductase (Fabi) In Apo Form (Two Molecules In Au) Length = 256

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 109/239 (45%), Gaps = 32/239 (13%)
Query: 39  GAKVVIA---DVQDKLGEDLADKLGQDVCYIH-CDISNEDEVINLVDTAVSKFGKLDIMY 94
           GAK+V     +   K  E L ++L Q   +++  D+ +++EVIN       + GK     
Sbjct: 32  GAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVIN----GFEQIGK----- 82
Query: 95  NNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAK-----------HAARVMVPQQKG 143
            + G +D  + SI      DL    +  +  GFL A+           H A+ ++P+  G
Sbjct: 83  -DVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPE-GG 140
Query: 144 CILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMK 203
            I+ T     E A        ++K  +   VK LA +LG   IRVN +S   + T +S K
Sbjct: 141 SIVATTYLGGEFAVQNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRT-LSAK 199
Query: 204 G--GVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVV 260
           G  G +  L E  + +   LK    + + +   A YL SD SS V+G+N+ VD GF  +
Sbjct: 200 GVGGFNTILKE--IEERAPLKRNVDQVE-VGKTAAYLLSDLSSGVTGENIHVDSGFHAI 255

>pdb|4ALL|A Chain A, Crystal Structure Of S. Aureus Fabi In Complex With Nadp And Triclosan (P212121) Length = 277

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 109/239 (45%), Gaps = 32/239 (13%)
Query: 39  GAKVVIA---DVQDKLGEDLADKLGQDVCYIH-CDISNEDEVINLVDTAVSKFGKLDIMY 94
           GAK+V     +   K  E L ++L Q   +++  D+ +++EVIN       + GK     
Sbjct: 53  GAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVIN----GFEQIGK----- 103
Query: 95  NNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAK-----------HAARVMVPQQKG 143
            + G +D  + SI      DL    +  +  GFL A+           H A+ ++P+  G
Sbjct: 104 -DVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPE-GG 161
Query: 144 CILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMK 203
            I+ T     E A        ++K  +   VK LA +LG   IRVN +S   + T +S K
Sbjct: 162 SIVATTYLGGEFAVQNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRT-LSAK 220
Query: 204 G--GVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVV 260
           G  G +  L E  + +   LK    + + +   A YL SD SS V+G+N+ VD GF  +
Sbjct: 221 GVGGFNTILKE--IEERAPLKRNVDQVE-VGKTAAYLLSDLSSGVTGENIHVDSGFHAI 276

>pdb|3PJD|A Chain A, Structure Of Enr G93a Mutant-Nad+-Triclosan Complex Length = 270

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 113/242 (46%), Gaps = 29/242 (11%)
Query: 33  ELFHENGAKVVIADVQDKLG---EDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGK 89
           +  H  GA++      DKL    E+ A +LG D+  + CD++ ED  I   DT  ++ GK
Sbjct: 26  QAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIV-LQCDVA-EDASI---DTMFAELGK 80
Query: 90  LDIMYNNAGILDRSFGSILDTPKSDLE-RLINVNTIGGF-LGAKHAARVMVPQQKGC--I 145
           +   +      D    SI   P   L+   +N  T  GF +    ++   V   K C  +
Sbjct: 81  VWPKF------DGFVHSIAFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSM 134
Query: 146 LFTASACTEIAGLGSPAYTISKYGILGL--------VKCLAAELGQYGIRVNCVSPYGLA 197
           L   SA   ++ LG+    I  Y ++GL        V+ +A  +G  G+RVN +S   + 
Sbjct: 135 LNPGSALLTLSYLGAE-RAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIR 193
Query: 198 TGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGF 257
           T ++  G  D   + +    +  ++   +  + + N+A +L SD S+ +SG+ + VDGGF
Sbjct: 194 T-LAASGIKDFRKMLAHCEAVTPIR-RTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGF 251
Query: 258 SV 259
           S+
Sbjct: 252 SI 253

>pdb|4FS3|A Chain A, Crystal Structure Of Staphylococcus Aureus Enoyl-Acp Reductase In Complex With Nadp And Afn-1252 Length = 256

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 109/239 (45%), Gaps = 32/239 (13%)
Query: 39  GAKVVIA---DVQDKLGEDLADKLGQDVCYIH-CDISNEDEVINLVDTAVSKFGKLDIMY 94
           GAK+V     +   K  E L ++L Q   +++  D+ +++EVIN       + GK     
Sbjct: 32  GAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVIN----GFEQIGK----- 82
Query: 95  NNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAK-----------HAARVMVPQQKG 143
            + G +D  + SI      DL    +  +  GFL A+           H A+ ++P+  G
Sbjct: 83  -DVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPE-GG 140
Query: 144 CILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMK 203
            I+ T     E A        ++K  +   VK LA +LG   IRVN +S   + T +S K
Sbjct: 141 SIVATTYLGGEFAVQNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRT-LSAK 199
Query: 204 G--GVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVV 260
           G  G +  L E  + +   LK    + + +   A YL SD SS V+G+N+ VD GF  +
Sbjct: 200 GVGGFNTILKE--IKERAPLKRNVDQVE-VGKTAAYLLSDLSSGVTGENIHVDSGFHAI 255

>pdb|3GNS|A Chain A, Crystal Structure Of The Staphylococcus Aureus Enoyl-Acyl Carrier Protein Reductase (Fabi) In Apo Form (One Molecule In Au) Length = 260

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 109/239 (45%), Gaps = 32/239 (13%)
Query: 39  GAKVVIA---DVQDKLGEDLADKLGQDVCYIH-CDISNEDEVINLVDTAVSKFGKLDIMY 94
           GAK+V     +   K  E L ++L Q   +++  D+ +++EVIN       + GK     
Sbjct: 36  GAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVIN----GFEQIGK----- 86
Query: 95  NNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAK-----------HAARVMVPQQKG 143
            + G +D  + SI      DL    +  +  GFL A+           H A+ ++P+  G
Sbjct: 87  -DVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPE-GG 144
Query: 144 CILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMK 203
            I+ T     E A        ++K  +   VK LA +LG   IRVN +S   + T +S K
Sbjct: 145 SIVATTYLGGEFAVQNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRT-LSAK 203
Query: 204 G--GVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVV 260
           G  G +  L E  + +   LK    + + +   A YL SD SS V+G+N+ VD GF  +
Sbjct: 204 GVGGFNTILKE--IEERAPLKRNVDQVE-VGKTAAYLLSDLSSGVTGENIHVDSGFHAI 259

>pdb|2QQ5|A Chain A, Crystal Structure Of Human Sdr Family Member 1 Length = 260

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 92/203 (45%), Gaps = 22/203 (10%)
Query: 56  ADKLGQDVCYIHCDISNEDEVINLVDTA-VSKFGKLDIMYNNA-----GILDRSFGSILD 109
           A  LG     + CD S E EV +L +     + G+LD++ NNA      IL+    +  +
Sbjct: 49  AQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWE 108
Query: 110 TPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYG 169
           TP S  + + NV   G +  + + AR+MVP  +G I+  +S  +       P Y + K  
Sbjct: 109 TPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYMFNVP-YGVGKAA 167
Query: 170 ILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTD 229
              L    A EL ++G  V+CVS +             P ++++ + +    K E L+  
Sbjct: 168 CDKLAADCAHELRRHG--VSCVSLW-------------PGIVQTELLKEHMAKEEVLQDP 212
Query: 230 GIANAALYLASDESSYVSGQNLV 252
            +       +S E++ +SG+ +V
Sbjct: 213 VLKQFKSAFSSAETTELSGKCVV 235

>pdb|3PJE|A Chain A, Structure Of Enr G93s Mutant-Nad+-Triclosan Complex Length = 270

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 113/242 (46%), Gaps = 29/242 (11%)
Query: 33  ELFHENGAKVVIADVQDKLG---EDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGK 89
           +  H  GA++      DKL    E+ A +LG D+  + CD++ ED  I   DT  ++ GK
Sbjct: 26  QAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIV-LQCDVA-EDASI---DTMFAELGK 80
Query: 90  LDIMYNNAGILDRSFGSILDTPKSDLE-RLINVNTIGGF-LGAKHAARVMVPQQKGC--I 145
           +   +      D    SI   P   L+   +N  T  GF +    ++   V   K C  +
Sbjct: 81  VWPKF------DGFVHSISFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSM 134
Query: 146 LFTASACTEIAGLGSPAYTISKYGILGL--------VKCLAAELGQYGIRVNCVSPYGLA 197
           L   SA   ++ LG+    I  Y ++GL        V+ +A  +G  G+RVN +S   + 
Sbjct: 135 LNPGSALLTLSYLGAE-RAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIR 193
Query: 198 TGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGF 257
           T ++  G  D   + +    +  ++   +  + + N+A +L SD S+ +SG+ + VDGGF
Sbjct: 194 T-LAASGIKDFRKMLAHCEAVTPIR-RTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGF 251
Query: 258 SV 259
           S+
Sbjct: 252 SI 253

>pdb|3PXX|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nicotinamide Adenine Dinucleotide Length = 287

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 93/226 (41%), Gaps = 36/226 (15%)
Query: 57  DKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLE 116
           +K G+       D+ +   V   +  AV++FGKLD++  NAGI     G+ L  P     
Sbjct: 67  EKTGRKAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGIC--PLGAHL--PVQAFA 122
Query: 117 RLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGL---------------GSP 161
              +V+ +G  +   HAA   +      I+ T S    +AGL               G  
Sbjct: 123 DAFDVDFVG-VINTVHAALPYL-TSGASIITTGS----VAGLIAAAQPPGAGGPQGPGGA 176
Query: 162 AYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGM----SMKGGVDPALIESSMSQ 217
            Y+ +K  +      LAA+L    IR N + P  + T M     M     P L   S + 
Sbjct: 177 GYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRAD 236
Query: 218 -------MGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGG 256
                  M  +   +++   I+NA  +LASDES YV+G    VD G
Sbjct: 237 ALLAFPAMQAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAG 282

>pdb|4DRY|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Rhizobium Meliloti Length = 281

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 70/179 (39%), Gaps = 23/179 (12%)
Query: 14  EGKVXXXXXXXXXXXXXXVELFHENGAKVVIA----DVQDKLGEDLADKLGQDVCYIHCD 69
           EG++               +     G  VVI     DV D    ++  + G  V  + CD
Sbjct: 32  EGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCD 91
Query: 70  ISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLER--------LINV 121
           + + D+V  L     ++F +LD++ NNAG          + P   LE         ++  
Sbjct: 92  VGDPDQVAALFAAVRAEFARLDLLVNNAG---------SNVPPVPLEEVTFEQWNGIVAA 142
Query: 122 NTIGGFLGAKHAARVMVPQ--QKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLA 178
           N  G FL  +HA R    Q  + G I+   S   +     S  YT +K+ I GL K  A
Sbjct: 143 NLTGAFLCTQHAFRXXKAQTPRGGRIINNGSISAQTPRPNSAPYTATKHAITGLTKSTA 201

>pdb|4EIT|A Chain A, Crystal Structure Of An Enoyl-(Acyl Carrier Protein) Reductase From Bartonella Henselae Length = 276

Iteration: 1
 Score = 54.7 bits (130), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 99/214 (46%), Gaps = 15/214 (7%)
Query: 53  EDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRS--FGSILDT 110
           E LA+++   VC  HCD+S+   +  + +T   K+GKLD + +  G  D+    G  +D 
Sbjct: 57  EPLAEEVKGFVCG-HCDVSDSASIDAVFNTIEKKWGKLDFLVHAIGFSDKEELSGRYVDI 115
Query: 111 PKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCIL-FTASACTEIAGLGSPAYT---IS 166
            +S+     N++        K A ++      G IL  T     ++     P Y    ++
Sbjct: 116 SESNFXXTXNISVYSLTALTKRAEKLX--SDGGSILTLTYYGAEKVV----PNYNVXGVA 169
Query: 167 KYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFL 226
           K  +   VK LA +LG   IRVN +S   + T ++  G  D   I         L+   +
Sbjct: 170 KAALEASVKYLAVDLGPKHIRVNAISAGPIKT-LAASGIGDFRYILKWNEYNAPLR-RTV 227
Query: 227 KTDGIANAALYLASDESSYVSGQNLVVDGGFSVV 260
             + + ++ALYL SD S  V+G+   VD G++++
Sbjct: 228 TIEEVGDSALYLLSDLSRSVTGEVHHVDSGYNII 261

>pdb|1ULU|A Chain A, Crystal Structure Of Tt0143 From Thermus Thermophilus Hb8 Length = 261

Iteration: 1
 Score = 54.3 bits (129), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 56/235 (23%), Positives = 102/235 (43%), Gaps = 20/235 (8%)
Query: 35  FHENGAKVVIADVQDKL---GEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLD 91
             E GA+V ++   ++L    E LA+ LG  + +   D++ ++E+  L       FG LD
Sbjct: 30  LKEAGAEVALSYQAERLRPEAEKLAEALGGALLF-RADVTQDEELDALFAGVKEAFGGLD 88
Query: 92  IMYNNAGILDRSF--GSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTA 149
            + +      R    G  +DT + D    + V+     +     A  ++ +  G +  T 
Sbjct: 89  YLVHAIAFAPREAXEGRYIDTRRQDWLLALEVSAYS-LVAVARRAEPLLREGGGIVTLTY 147
Query: 150 SACTEIAGLGSPAY---TISKYGILGLVKCLAAELGQYGIRVNCVS--PYGLATGMSMKG 204
            A  ++     P Y    I+K  +   V+ LA ELG  G+RVN +S  P       S+ G
Sbjct: 148 YASEKVV----PKYNVXAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPG 203
Query: 205 GVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSV 259
                     ++Q   L+    + + + N  L+L S  +S ++G+ + VD G+ +
Sbjct: 204 FTK---XYDRVAQTAPLRRNITQEE-VGNLGLFLLSPLASGITGEVVYVDAGYHI 254

>pdb|1UAY|A Chain A, Crystal Structure Of Type Ii 3-Hydroxyacyl-Coa Dehydrogenase From Thermus Thermophilus Hb8 Length = 242

Iteration: 1
 Score = 54.3 bits (129), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 16/160 (10%)
Query: 41  KVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM-YNNAGI 99
           +VV+ D++ +         G+D+ Y+  D++ E++V   V  A  +     ++     G+
Sbjct: 28  RVVVLDLRRE---------GEDLIYVEGDVTREEDVRRAVARAQEEAPLFAVVSAAGVGL 78
Query: 100 LDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQ------QKGCILFTASACT 153
            ++  G           R++ VN +G F   + AA  M         Q+G I+ TAS   
Sbjct: 79  AEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAA 138
Query: 154 EIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSP 193
               +G  AY  SK G++ L    A EL  +GIRV  V+P
Sbjct: 139 FEGQIGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAP 178

>pdb|1DFG|A Chain A, X-Ray Structure Of Escherichia Coli Enoyl Reductase With Bound Nad And Benzo-Diazaborine Length = 261

Iteration: 1
 Score = 54.3 bits (129), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 113/242 (46%), Gaps = 29/242 (11%)
Query: 33  ELFHENGAKVVIADVQDKLG---EDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGK 89
           +  H  GA++      DKL    E+ A +LG D+  + CD++ ED  I   DT  ++ GK
Sbjct: 25  QAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIV-LQCDVA-EDASI---DTMFAELGK 79
Query: 90  LDIMYNNAGILDRSFGSILDTPKSDLE-RLINVNTIGGF-LGAKHAARVMVPQQKGC--I 145
           +   +      D    SI   P   L+   +N  T  GF +    ++   V   K C  +
Sbjct: 80  VWPKF------DGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSM 133
Query: 146 LFTASACTEIAGLGSPAYTISKYGILGL--------VKCLAAELGQYGIRVNCVSPYGLA 197
           L   SA   ++ LG+    I  Y ++GL        V+ +A  +G  G+RVN +S   + 
Sbjct: 134 LNPGSALLTLSYLGAE-RAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIR 192
Query: 198 TGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGF 257
           T ++  G  D   + +    +  ++   +  + + N+A +L SD S+ +SG+ + VDGGF
Sbjct: 193 T-LAASGIKDFRKMLAHCEAVTPIR-RTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGF 250
Query: 258 SV 259
           S+
Sbjct: 251 SI 252

>pdb|1C14|A Chain A, Crystal Structure Of E Coli Enoyl Reductase-nad+-triclosan Complex Length = 262

Iteration: 1
 Score = 54.3 bits (129), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 113/242 (46%), Gaps = 29/242 (11%)
Query: 33  ELFHENGAKVVIADVQDKLG---EDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGK 89
           +  H  GA++      DKL    E+ A +LG D+  + CD++ ED  I   DT  ++ GK
Sbjct: 26  QAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIV-LQCDVA-EDASI---DTMFAELGK 80
Query: 90  LDIMYNNAGILDRSFGSILDTPKSDLE-RLINVNTIGGF-LGAKHAARVMVPQQKGC--I 145
           +   +      D    SI   P   L+   +N  T  GF +    ++   V   K C  +
Sbjct: 81  VWPKF------DGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSM 134
Query: 146 LFTASACTEIAGLGSPAYTISKYGILGL--------VKCLAAELGQYGIRVNCVSPYGLA 197
           L   SA   ++ LG+    I  Y ++GL        V+ +A  +G  G+RVN +S   + 
Sbjct: 135 LNPGSALLTLSYLGAE-RAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIR 193
Query: 198 TGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGF 257
           T ++  G  D   + +    +  ++   +  + + N+A +L SD S+ +SG+ + VDGGF
Sbjct: 194 T-LAASGIKDFRKMLAHCEAVTPIR-RTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGF 251
Query: 258 SV 259
           S+
Sbjct: 252 SI 253

>pdb|3G1T|A Chain A, Crystal Structure Of Short Chain Dehydrogenase From Salmonella Enterica Subsp. Enterica Serovar Typhi Str. Ct18 Length = 258

Iteration: 1
 Score = 54.3 bits (129), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 35/153 (22%), Positives = 71/153 (46%), Gaps = 3/153 (1%)
Query: 50  KLGEDLADKLGQDVCYIHCDI--SNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSI 107
           ++ + +AD+      +   D+     +E   + D   + + +LD + +NAG+L    G +
Sbjct: 53  RVAQHIADEQHVQPQWFTLDLLTCTAEECRQVADRIAAHYPRLDGVLHNAGLLG-EIGPM 111
Query: 108 LDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISK 167
            +      + ++ VN    F+  +    +++    G ++FT+S+          AY  SK
Sbjct: 112 SEQDPQIWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYATSK 171
Query: 168 YGILGLVKCLAAELGQYGIRVNCVSPYGLATGM 200
           +   G+++ LA E     +RVNC++P G  T M
Sbjct: 172 FATEGMMQVLADEYQNRSLRVNCINPGGTRTSM 204

>pdb|1QSG|A Chain A, Crystal Structure Of Enoyl Reductase Inhibition By Triclosan Length = 265

Iteration: 1
 Score = 54.3 bits (129), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 113/242 (46%), Gaps = 29/242 (11%)
Query: 33  ELFHENGAKVVIADVQDKLG---EDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGK 89
           +  H  GA++      DKL    E+ A +LG D+  + CD++ ED  I   DT  ++ GK
Sbjct: 29  QAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIV-LQCDVA-EDASI---DTMFAELGK 83
Query: 90  LDIMYNNAGILDRSFGSILDTPKSDLE-RLINVNTIGGF-LGAKHAARVMVPQQKGC--I 145
           +   +      D    SI   P   L+   +N  T  GF +    ++   V   K C  +
Sbjct: 84  VWPKF------DGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSM 137
Query: 146 LFTASACTEIAGLGSPAYTISKYGILGL--------VKCLAAELGQYGIRVNCVSPYGLA 197
           L   SA   ++ LG+    I  Y ++GL        V+ +A  +G  G+RVN +S   + 
Sbjct: 138 LNPGSALLTLSYLGAE-RAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIR 196
Query: 198 TGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGF 257
           T ++  G  D   + +    +  ++   +  + + N+A +L SD S+ +SG+ + VDGGF
Sbjct: 197 T-LAASGIKDFRKMLAHCEAVTPIR-RTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGF 254
Query: 258 SV 259
           S+
Sbjct: 255 SI 256

>pdb|3E03|A Chain A, Crystal Structure Of A Putative Dehydrogenase From Xanthomonas Campestris Length = 274

Iteration: 1
 Score = 53.9 bits (128), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 59/130 (45%), Gaps = 4/130 (3%)
Query: 66  IHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIG 125
           + CDI  ED+V   V   V  FG +DI+ NNA  +       LDTP    +    VN  G
Sbjct: 67  LKCDIREEDQVRAAVAATVDTFGGIDILVNNASAI--WLRGTLDTPXKRFDLXQQVNARG 124
Query: 126 GFLGAKHAARVMVPQQKGCILFTASACT-EIAGLGS-PAYTISKYGILGLVKCLAAELGQ 183
            F+ A+     ++      IL  A   +   A  G+   YT++K G   +   LAAE G 
Sbjct: 125 SFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAHTGYTLAKXGXSLVTLGLAAEFGP 184
Query: 184 YGIRVNCVSP 193
            G+ +N + P
Sbjct: 185 QGVAINALWP 194

>pdb|3GRK|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Reductase Sdr Glucose-Ribitol Dehydrogenase From Brucella Melitensis Length = 293

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/230 (25%), Positives = 100/230 (43%), Gaps = 10/230 (4%)
Query: 36  HENGAKVVIA---DVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDI 92
            E GA++      D   K  E LA++LG  V   HCD+++   +  + +T   K+GKLD 
Sbjct: 54  REAGAELAFTYQGDALKKRVEPLAEELGAFVAG-HCDVADAASIDAVFETLEKKWGKLDF 112
Query: 93  MYNNAGILDRS--FGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTAS 150
           + +  G  D+    G  +DT +++    + ++       ++ A ++M     G IL    
Sbjct: 113 LVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMA--DGGSILTLTY 170
Query: 151 ACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPAL 210
              E          ++K  +   VK LA +LG   IRVN +S   + T ++  G  D   
Sbjct: 171 YGAEKVMPNYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKT-LAASGIGDFRY 229
Query: 211 IESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVV 260
           I         L+   +  D + +  LY  SD S  V+G+    D G+ V+
Sbjct: 230 ILKWNEYNAPLR-RTVTIDEVGDVGLYFLSDLSRSVTGEVHHADSGYHVI 278

>pdb|3H7A|A Chain A, Crystal Structure Of Short-Chain Dehydrogenase From Rhodopseudomonas Palustris Length = 252

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 82/185 (44%), Gaps = 23/185 (12%)
Query: 36  HENGAKV--VIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM 93
             NG K+  ++A+++   G  +A  L         D  NEDEV   ++ A +    L++ 
Sbjct: 38  RRNGEKLAPLVAEIEAAGGRIVARSL---------DARNEDEVTAFLNAADAH-APLEVT 87
Query: 94  YNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACT 153
             N G  + +F  IL+T      ++  +    GF+  + +AR+M+   +G I FT +  +
Sbjct: 88  IFNVGA-NVNF-PILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATAS 145
Query: 154 EIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIES 213
              G G  A+  +K+G+  + + +A EL    I V           + +  GVD A +  
Sbjct: 146 LRGGSGFAAFASAKFGLRAVAQSMARELMPKNIHV---------AHLIIDSGVDTAWVRE 196
Query: 214 SMSQM 218
              QM
Sbjct: 197 RREQM 201

>pdb|1P33|A Chain A, Pteridine Reductase From Leishmania Tarentolae Complex With Nadph And Mtx Length = 289

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 93/211 (44%), Gaps = 28/211 (13%)
Query: 62  DVCYIH---CDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFG--SILDTPKSDLE 116
           D CY+H   CD+        LV+ A S F    ++  +AG    S G    L+   +DL 
Sbjct: 95  DACYMHWGRCDV--------LVNNA-SSFYPTPLLRKDAGEGGSSVGDKESLEVAAADL- 144
Query: 117 RLINVNTIGG-FLGAKHAARV--MVPQQKGC---ILFTASACTEIAGLGSPAYTISKYGI 170
                N I   FL    A RV     +Q+G    I+    A T    LG   YT++K  +
Sbjct: 145 --FGSNAIAPYFLIKAFAQRVADTRAEQRGTSYSIVNMVDAMTSQPLLGYTMYTMAKEAL 202
Query: 171 LGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDG 230
            GL +  A EL    IRVN VSP     G+S+     P  ++    +   L       + 
Sbjct: 203 EGLTRSAALELASLQIRVNGVSP-----GLSVLPDDMPFSVQEDYRRKVPLYQRNSSAEE 257
Query: 231 IANAALYLASDESSYVSGQNLVVDGGFSVVN 261
           +++  ++L S ++ Y++G  + VDGG+S+  
Sbjct: 258 VSDVVIFLCSPKAKYITGTCIKVDGGYSLTR 288

>pdb|1XG5|A Chain A, Structure Of Human Putative Dehydrogenase Mgc4172 In Complex With Nadp Length = 279

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 85/180 (47%), Gaps = 14/180 (7%)
Query: 68  CDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGF 127
           CD+SNE++++++     S+   +DI  NNAG+      ++L    S  + + NVN +   
Sbjct: 90  CDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPD--TLLSGSTSGWKDMFNVNVLALS 147
Query: 128 LGAKHAARVMVPQQ--KGCIL-FTASACTEIAGLG-SPAYTISKYGILGLVKCLAAEL-- 181
           +  + A + M  +    G I+   + +   +  L  +  Y+ +KY +  L + L  EL  
Sbjct: 148 ICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELRE 207
Query: 182 GQYGIRVNCVSPYGLATGMSMK-GGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLAS 240
            Q  IR  C+SP  + T  + K    DP    ++  QM     + LK + +A A +Y+ S
Sbjct: 208 AQTHIRATCISPGVVETQFAFKLHDKDPEKAAATYEQM-----KCLKPEDVAEAVIYVLS 262

>pdb|4IXT|A Chain A, Structure Of A 37-fold Mutant Of Halohydrin Dehalogenase (hhec) Bound To Ethyl (r)-4-cyano-3-hydroxybutyrate Length = 254

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/203 (24%), Positives = 84/203 (41%), Gaps = 23/203 (11%)
Query: 72  NEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAK 131
           +E E + L++   S  G +DI+ +N  I    +  I      D   ++    I  F  A 
Sbjct: 55  SEQEPVELIEAVTSALGHVDILVSN-DIAPVEWRPIDKYAVEDYRDMVEALQIKPFALAN 113
Query: 132 HAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCV 191
             A  M  ++ G I+F  SA +         Y  ++ G   L   L+ ELG++ I V  +
Sbjct: 114 AVASQMKRRKSGHIIFITSAASFGPWKELSTYASARAGASALANALSKELGEHNIPVFAI 173
Query: 192 SPYGLATG------MSMKGGVDPALIE-----SSMSQMGNLK--GEFLKTDGIANAALYL 238
           +P G+ +G       S      P  +      +++ ++G  K  GE +          +L
Sbjct: 174 APNGVDSGDSPYYYPSEPWKTSPEHVAWVRKYTALQRLGTQKELGELVT---------FL 224
Query: 239 ASDESSYVSGQNLVVDGGFSVVN 261
           AS    Y++GQ   + GGF VV 
Sbjct: 225 ASGSCDYLTGQVFWLAGGFPVVE 247

>pdb|3M1A|A Chain A, The Crystal Structure Of A Short-Chain Dehydrogenase From Streptomyces Avermitilis To 2a Length = 281

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/143 (23%), Positives = 71/143 (49%), Gaps = 10/143 (6%)
Query: 66  IHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIG 125
           I  D+++ + +  +    ++++G++D++ NNAG      G+  +T + +L  L  ++   
Sbjct: 56  ISLDVTDGERIDVVAADVLARYGRVDVLVNNAGRT--QVGAFEETTERELRDLFELHV-- 111
Query: 126 GFLGAKHAARVMVPQQK----GCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAEL 181
              G     R ++PQ +    G ++  +S   +++  G  AY+ +K  +  L + LA E+
Sbjct: 112 --FGPARLTRALLPQXRERGSGSVVNISSFGGQLSFAGFSAYSATKAALEQLSEGLADEV 169
Query: 182 GQYGIRVNCVSPYGLATGMSMKG 204
             +GI+V  V P    T +  KG
Sbjct: 170 APFGIKVLIVEPGAFRTNLFGKG 192

>pdb|1MXF|A Chain A, Crystal Structure Of Inhibitor Complex Of Putative Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi Length = 276

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 80/194 (41%), Gaps = 19/194 (9%)
Query: 78  NLVDTAVSKFGKLDIMYNNAGIL--------DRSFGSILDTP-KSDLERLINVNTIGGFL 128
           +++D +   FG+ D++ NNA           D + G+    P  + +  L   N +    
Sbjct: 83  DIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLF 142
Query: 129 GAKHAARVM-----VPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQ 183
             +  AR          +   ++    A T++   G   YT +K+ + GL +  A EL  
Sbjct: 143 LIRAFARRQGEGGAWRSRNLSVVNLCDAXTDLPLPGFCVYTXAKHALGGLTRAAALELAP 202
Query: 184 YGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDES 243
             IRVN V+P     G+S+     P   +    +   L         IA+A  +L S ++
Sbjct: 203 RHIRVNAVAP-----GLSLLPPAXPQETQEEYRRKVPLGQSEASAAQIADAIAFLVSKDA 257
Query: 244 SYVSGQNLVVDGGF 257
            Y++G  L VDGG 
Sbjct: 258 GYITGTTLKVDGGL 271

>pdb|1MXH|A Chain A, Crystal Structure Of Substrate Complex Of Putative Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi Length = 276

Iteration: 1
 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 81/194 (41%), Gaps = 19/194 (9%)
Query: 78  NLVDTAVSKFGKLDIMYNNAGIL--------DRSFGSILDTP-KSDLERLINVNTIGGFL 128
           +++D +   FG+ D++ NNA           D + G+    P  + +  L   N +    
Sbjct: 83  DIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLF 142
Query: 129 GAKHAARVM-----VPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQ 183
             +  AR          +   ++    A T++   G   YT++K+ + GL +  A EL  
Sbjct: 143 LIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKHALGGLTRAAALELAP 202
Query: 184 YGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDES 243
             IRVN V+P     G+S+     P   +    +   L         IA+A  +L S ++
Sbjct: 203 RHIRVNAVAP-----GLSLLPPAMPQETQEEYRRKVPLGQSEASAAQIADAIAFLVSKDA 257
Query: 244 SYVSGQNLVVDGGF 257
            Y++G  L VDGG 
Sbjct: 258 GYITGTTLKVDGGL 271

>pdb|2P91|A Chain A, Crystal Structure Of Enoyl-[acyl-Carrier-Protein] Reductase (Nadh) From Aquifex Aeolicus Vf5 Length = 285

Iteration: 1
 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 48/236 (20%), Positives = 107/236 (45%), Gaps = 19/236 (8%)
Query: 35  FHENGAKVVIADVQDKLGE---DLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLD 91
           FH  GA++       KL +   ++A   G D+  + CD+S ++++ NL       +G LD
Sbjct: 43  FHREGAQLAFTYATPKLEKRVREIAKGFGSDLV-VKCDVSLDEDIKNLKKFLEENWGSLD 101
Query: 92  IMYNNAGILDRS--FGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTA 149
           I+ ++     +    G ++DT +   +  ++++        +    +M  +    +  + 
Sbjct: 102 IIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSY 161
Query: 150 SACTEIAGLGSPAYT---ISKYGILGLVKCLAAELGQYGIRVNCVS--PYGLATGMSMKG 204
               ++     P Y    I+K  +   V+ LA ++ ++G R+N +S  P       S+ G
Sbjct: 162 YGAEKVV----PHYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITG 217
Query: 205 GVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVV 260
                L+E +     N  G+ +  + + + A++L SD +  ++G+ + VD G+ ++
Sbjct: 218 F--HLLMEHTTKV--NPFGKPITIEDVGDTAVFLCSDWARAITGEVVHVDNGYHIM 269

>pdb|3OIF|A Chain A, Crystal Structure Of Enoyl-Acp Reductases I (Fabi) From B. Subtilis (Complex With Nad And Tcl) Length = 266

Iteration: 1
 Score = 50.8 bits (120), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 56/235 (23%), Positives = 103/235 (43%), Gaps = 16/235 (6%)
Query: 35  FHENGAKVVIADVQDKLGEDLADKLG----QDVCYIHCDISNEDEVINLVDTAVSKFGKL 90
            HE GA+++     ++L + + +  G     D   + CD++N+ E+     +   + G +
Sbjct: 29  LHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQVGVI 88
Query: 91  DIMYNNAGILDRS--FGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFT 148
             + +     ++    G  L+T +       N+++         AAR M+ +    +  T
Sbjct: 89  HGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYS-LTAVVKAARPMMTEGGSIVTLT 147
Query: 149 ASACTEIAGLGSPAYTI---SKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGG 205
                    L  P Y +   +K  +   VK LAA+LG+  IRVN +S   + T +S KG 
Sbjct: 148 YLG----GELVMPNYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRT-LSAKGI 202
Query: 206 VDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVV 260
            D   I   + +   L+      + + + A +L SD S  ++G+NL VD GF + 
Sbjct: 203 SDFNSILKDIEERAPLR-RTTTPEEVGDTAAFLFSDMSRGITGENLHVDSGFHIT 256

>pdb|3K2E|A Chain A, Crystal Structure Of Enoyl-(Acyl-Carrier-Protein) Reductase From Anaplasma Phagocytophilum At 1.9a Resolution Length = 296

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/233 (27%), Positives = 96/233 (41%), Gaps = 49/233 (21%)
Query: 49  DKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRS--FGS 106
           D L E L  KL      + CD+S+ + V N+      ++G LD + +     D++   G 
Sbjct: 73  DPLAESLGVKLT-----VPCDVSDAESVDNMFKVLAEEWGSLDFVVHAVAFSDKNELKGR 127
Query: 107 ILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFT--ASACTEIAGLGSPAYT 164
            +DT            ++G FL + H +         C  FT  AS    +   G    T
Sbjct: 128 YVDT------------SLGNFLTSMHIS---------CYSFTYIASKAEPLMTNGGSILT 166
Query: 165 ISKYG---------ILGL--------VKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVD 207
           +S YG         ++G+        VK LA +LG+  IRVN +S  G    ++  G  D
Sbjct: 167 LSYYGAEKVVPHYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISA-GPVRTLASSGISD 225
Query: 208 PALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVV 260
              I +       L+      D +  AALYL SD     +G+ + VD G+ VV
Sbjct: 226 FHYILTWNKYNSPLRRN-TTLDDVGGAALYLLSDLGRGTTGETVHVDCGYHVV 277

>pdb|3T4X|A Chain A, Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDUCTASE FROM Bacillus Anthracis Str. Ames Ancestor Length = 267

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/190 (23%), Positives = 80/190 (42%), Gaps = 23/190 (12%)
Query: 84  VSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKG 143
           + K+ K+DI+ NN GI +       D P  D  +L  VN   G    +   +  + +++G
Sbjct: 80  IEKYPKVDILINNLGIFEPV--EYFDIPDEDWFKLFEVNIXSGVRLTRSYLKKXIERKEG 137
Query: 144 CILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMK 203
            ++F AS            Y+ +K   L L + LA       + VN + P     G ++ 
Sbjct: 138 RVIFIASEAAIXPSQEXAHYSATKTXQLSLSRSLAELTTGTNVTVNTIXP-----GSTLT 192
Query: 204 GGVDPAL----------IESSMSQM------GNLKGEFLKTDGIANAALYLASDESSYVS 247
            GV+  L          IE +  +        ++    ++ + IA+   +L+S  SS ++
Sbjct: 193 EGVETXLNSLYPNEQLTIEEAEKRFXKENRPTSIIQRLIRPEEIAHLVTFLSSPLSSAIN 252
Query: 248 GQNLVVDGGF 257
           G  L +DGG 
Sbjct: 253 GSALRIDGGL 262

>pdb|1FJH|A Chain A, The Crystal Structure Of 3-Alpha-Hydroxysteroid Dehydrogenase From Comamonas Testosteroni, A Member Of The Short Chain DehydrogenaseREDUCTASE FAMILY Length = 257

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/118 (33%), Positives = 60/118 (50%), Gaps = 4/118 (3%)
Query: 149 ASACTEIAGL--GSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGV 206
           A A  E AG   G+ AY  SK  +   V+  AA  G+ G+R+N ++P    T +   G  
Sbjct: 139 ARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQ 198
Query: 207 DPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGF-SVVNPT 263
           DP   E S+++     G   +   +A+   +L S  +SYV G  +V+DGG  +V+ PT
Sbjct: 199 DPRYGE-SIAKFVPPMGRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGGIDAVMRPT 255

>pdb|2NTV|A Chain A, Mycobacterium Leprae Inha Bound With Pth-Nad Adduct Length = 268

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 57/243 (23%), Positives = 102/243 (41%), Gaps = 25/243 (10%)
Query: 36  HENGAKVVIADVQD-KLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFG---KLD 91
            E GA++V+      +L + +AD+L      I  D+ NE+ +  L +   ++ G   KLD
Sbjct: 29  QEAGAQLVLTGFDRLRLIQRIADRLPDKAPLIELDVQNEEHLATLAERVTAEIGEGNKLD 88
Query: 92  IMYNNAGILDRS---FGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFT 148
            + ++ G + ++        D P  D+ + I+++T      AK  A +++    G I+  
Sbjct: 89  GVVHSIGFMPQTGMGTNQFFDAPYEDVSKGIHISTYSYASLAK--ALLLIMNSGGSIVGM 146
Query: 149 ASACTEIAGLGSPAY---TISKYGILGLVKCLAAELGQYGIRVNCVSPYGLAT-GMSM-- 202
               T       PAY   T++K  +  + + +A E G+YG+R N V+   + T  MS   
Sbjct: 147 DFDPTR----AMPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIV 202
Query: 203 ------KGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGG 256
                 + G    L+E    Q   +         +A     L S+     +G  +  DGG
Sbjct: 203 GGAFGEEAGAQMQLLEEGWDQRAPIGWNMKDPTPVAKTVCALLSEWLPATTGSIIYADGG 262
Query: 257 FSV 259
            S 
Sbjct: 263 AST 265

>pdb|3UCE|A Chain A, Crystal Structure Of A Small-Chain Dehydrogenase In Complex With Nadph Length = 223

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 94/216 (43%), Gaps = 24/216 (11%)
Query: 51  LGEDLADKLGQDVCYIHC-------DISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRS 103
           +G +LA +L  +   +H        DIS+E  V +  +T     G  D +   AG    +
Sbjct: 18  IGAELAKQLESEHTIVHVASRQTGLDISDEKSVYHYFET----IGAFDHLIVTAGSYAPA 73
Query: 104 FGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAY 163
            G ++D   +  +   +    G  L AKH AR +  +Q G I  T+   +      +   
Sbjct: 74  -GKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYL--KQGGSITLTSGMLSRKVVANTYVK 130
Query: 164 TISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKG-GVDP--ALIESSMSQMGN 220
                 I    K LA EL    IRVN +SP GL    + KG   D   A+ + + S +  
Sbjct: 131 AAINAAIEATTKVLAKELAP--IRVNAISP-GLTKTEAYKGMNADDRDAMYQRTQSHLP- 186
Query: 221 LKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGG 256
             G+  +   IA A  YL + ++SY++G  + VDGG
Sbjct: 187 -VGKVGEASDIAMA--YLFAIQNSYMTGTVIDVDGG 219

>pdb|2Z1N|A Chain A, Crystal Structure Of Ape0912 From Aeropyrum Pernix K1 Length = 260

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 55/236 (23%), Positives = 105/236 (44%), Gaps = 23/236 (9%)
Query: 37  ENGAKVVIADVQDKLGEDLADKL-----GQDVCYIHCDISNEDEVINLVDTAVSKFGKLD 91
            NGA++++     +  E  A ++     G  V  +  DI    ++  L + A    G  D
Sbjct: 29  RNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKA-RDLGGAD 87
Query: 92  IM-YNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTAS 150
           I+ Y+  G     F  +      +  RL+  + +  ++G + AA  MV +  G +++  S
Sbjct: 88  ILVYSTGGPRPGRFMELGVEDWDESYRLLARSAV--WVG-RRAAEQMVEKGWGRMVYIGS 144
Query: 151 ACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSP--------YGLATGMSM 202
                         I +  ++G+V+ LA EL  +G+ VN V P          LA   + 
Sbjct: 145 VTLLRPWQDLALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERAR 204
Query: 203 KGGVDPALIESSMSQMGNL--KGEFLKTDGIANAALYLASDESSYVSGQNLVVDGG 256
           + G+    +E ++  M +    G   K + +A+   +LAS+++S+++G  + VDGG
Sbjct: 205 RSGIT---VEEALKSMASRIPMGRVGKPEELASVVAFLASEKASFITGAVIPVDGG 257

>pdb|3TFO|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From Sinorhizobium Meliloti Length = 264

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/153 (24%), Positives = 65/153 (42%), Gaps = 13/153 (8%)
Query: 41  KVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGIL 100
           + +  +++D  G  LA  L         D+++   V      AV  +G++D++ NNAG++
Sbjct: 42  EAIATEIRDAGGTALAQVL---------DVTDRHSVAAFAQAAVDTWGRIDVLVNNAGVM 92
Query: 101 DRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGS 160
                 +      + ER+I+VN  G   G      +M  Q+ G I+   S         +
Sbjct: 93  --PLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPTA 150
Query: 161 PAYTISKYGILGLVKCLAAELGQYGIRVNCVSP 193
             Y  +K+ +  +   L  E     IRV CV+P
Sbjct: 151 AVYCATKFAVRAISDGLRQE--STNIRVTCVNP 181

>pdb|1PWX|A Chain A, Crystal Structure Of The Haloalcohol Dehalogenase Hhec Complexed With Bromide Length = 254

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 50/211 (23%), Positives = 82/211 (38%), Gaps = 23/211 (10%)
Query: 64  CYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNT 123
            Y      +E E   L++   S +G++D++ +N  I    F  I      D    +    
Sbjct: 47  TYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSN-DIFAPEFQPIDKYAVEDYRGAVEALQ 105
Query: 124 IGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQ 183
           I  F      A  M  ++ G I+F  SA           YT ++ G   L   L+ ELG+
Sbjct: 106 IRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGE 165
Query: 184 YGIRVNCV---------SPYGLATGMSMKGGVDPALIE--SSMSQMGNLK--GEFLKTDG 230
           Y I V  +         SPY   T          A ++  +++ ++G  K  GE +    
Sbjct: 166 YNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVA--- 222
Query: 231 IANAALYLASDESSYVSGQNLVVDGGFSVVN 261
                 +LAS    Y++GQ   + GGF ++ 
Sbjct: 223 ------FLASGSCDYLTGQVFWLAGGFPMIE 247

>pdb|2AQI|A Chain A, Crystal Structure Of Isoniazid-Resistant I47t Enoyl-Acp(Coa) Reductase Mutant Enzyme From Mycobacterium Tuberculosis In Complex With Nadh Length = 269

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 55/243 (22%), Positives = 99/243 (40%), Gaps = 31/243 (12%)
Query: 36  HENGAKVVIADVQD-KLGEDLADKLGQDVCYIHCDISNEDEVINL---VDTAVSKFGKLD 91
            E GA++V+      +L + + D+L      +  D+ NE+ + +L   V  A+    KLD
Sbjct: 30  QEQGAQLVLTGFDRLRLTQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAGNKLD 89
Query: 92  IMYNNAGILDRS---FGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCIL-- 146
            + ++ G + ++        D P +D+ + I+++       AK    +M P   G I+  
Sbjct: 90  GVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP--GGSIVGM 147
Query: 147 -FTASACTEIAGLGSPAY---TISKYGILGLVKCLAAELGQYGIRVNCVSPYGLAT---- 198
            F  S          PAY   T++K  +  + + +A E G+YG+R N V+   + T    
Sbjct: 148 DFDPSRAM-------PAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMS 200
Query: 199 -----GMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVV 253
                 +  + G    L+E    Q   +         +A     L SD     +G  +  
Sbjct: 201 AIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVAKTVCALLSDWLPATTGDIIYA 260
Query: 254 DGG 256
           DGG
Sbjct: 261 DGG 263

>pdb|3I1J|A Chain A, Structure Of A Putative Short Chain Dehydrogenase From Pseudomonas Syringae Length = 247

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 42/167 (25%), Positives = 72/167 (43%), Gaps = 14/167 (8%)
Query: 86  KFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCI 145
           +FG+LD + +NA I+      +   P  D  ++ +VN    F   +    ++   +   I
Sbjct: 91  EFGRLDGLLHNASIIG-PRTPLEQLPDEDFXQVXHVNVNATFXLTRALLPLLKRSEDASI 149
Query: 146 LFTASACTEIAGLGSPAYTISKYGILGLVKCLAAEL-GQYGIRVNCVSPYGLATGMSMKG 204
            FT+S+          AY +SK+   GL + LA EL G   +R N ++P    TG   + 
Sbjct: 150 AFTSSSVGRKGRANWGAYGVSKFATEGLXQTLADELEGVTAVRANSINPGATRTGXRAQA 209
Query: 205 GVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNL 251
             D    E+ ++            + I    LYL   +S+ ++GQ L
Sbjct: 210 YPD----ENPLNNPA--------PEDIXPVYLYLXGPDSTGINGQAL 244

>pdb|3OEY|A Chain A, Crystal Structure Of Inha_t266e:nadh Complex Length = 269

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/243 (22%), Positives = 99/243 (40%), Gaps = 31/243 (12%)
Query: 36  HENGAKVVIADVQD-KLGEDLADKLGQDVCYIHCDISNEDEVINL---VDTAVSKFGKLD 91
            E GA++V+      +L + + D+L      +  D+ NE+ + +L   V  A+    KLD
Sbjct: 30  QEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAGNKLD 89
Query: 92  IMYNNAGILDRS---FGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCIL-- 146
            + ++ G + ++        D P +D+ + I+++       AK    +M P   G I+  
Sbjct: 90  GVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP--GGSIVGM 147
Query: 147 -FTASACTEIAGLGSPAY---TISKYGILGLVKCLAAELGQYGIRVNCVSPYGLAT---- 198
            F  S          PAY   T++K  +  + + +A E G+YG+R N V+   + T    
Sbjct: 148 DFDPSRAM-------PAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMS 200
Query: 199 -----GMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVV 253
                 +  + G    L+E    Q   +         +A     L SD     +G  +  
Sbjct: 201 AIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVAKTVCALLSDWLPATTGDIIYA 260
Query: 254 DGG 256
           DGG
Sbjct: 261 DGG 263

>pdb|4DQU|A Chain A, Mycobacterium Tuberculosis Inha-D148g Mutant In Complex With Nadh Length = 269

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/243 (22%), Positives = 99/243 (40%), Gaps = 31/243 (12%)
Query: 36  HENGAKVVIADVQD-KLGEDLADKLGQDVCYIHCDISNEDEVINL---VDTAVSKFGKLD 91
            E GA++V+      +L + + D+L      +  D+ NE+ + +L   V  A+    KLD
Sbjct: 30  QEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAGNKLD 89
Query: 92  IMYNNAGILDRS---FGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCIL-- 146
            + ++ G + ++        D P +D+ + I+++       AK    +M P   G I+  
Sbjct: 90  GVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP--GGSIVGM 147
Query: 147 -FTASACTEIAGLGSPAY---TISKYGILGLVKCLAAELGQYGIRVNCVSPYGLAT---- 198
            F  S          PAY   T++K  +  + + +A E G+YG+R N V+   + T    
Sbjct: 148 GFDPSRAM-------PAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMS 200
Query: 199 -----GMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVV 253
                 +  + G    L+E    Q   +         +A     L SD     +G  +  
Sbjct: 201 AIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVAKTVCALLSDWLPATTGDIIYA 260
Query: 254 DGG 256
           DGG
Sbjct: 261 DGG 263

>pdb|2AQH|A Chain A, Crystal Structure Of Isoniazid-Resistant I21v Enoyl-Acp(Coa) Reductase Mutant Enzyme From Mycobacterium Tuberculosis In Complex With Nadh Length = 269

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/243 (22%), Positives = 99/243 (40%), Gaps = 31/243 (12%)
Query: 36  HENGAKVVIADVQD-KLGEDLADKLGQDVCYIHCDISNEDEVINL---VDTAVSKFGKLD 91
            E GA++V+      +L + + D+L      +  D+ NE+ + +L   V  A+    KLD
Sbjct: 30  QEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAGNKLD 89
Query: 92  IMYNNAGILDRS---FGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCIL-- 146
            + ++ G + ++        D P +D+ + I+++       AK    +M P   G I+  
Sbjct: 90  GVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP--GGSIVGM 147
Query: 147 -FTASACTEIAGLGSPAY---TISKYGILGLVKCLAAELGQYGIRVNCVSPYGLAT---- 198
            F  S          PAY   T++K  +  + + +A E G+YG+R N V+   + T    
Sbjct: 148 DFDPSRAM-------PAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMS 200
Query: 199 -----GMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVV 253
                 +  + G    L+E    Q   +         +A     L SD     +G  +  
Sbjct: 201 AIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVAKTVCALLSDWLPATTGDIIYA 260
Query: 254 DGG 256
           DGG
Sbjct: 261 DGG 263

>pdb|4DA9|A Chain A, Crystal Structure Of Putative Short-Chain DehydrogenaseREDUCTASE FROM Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/206 (24%), Positives = 85/206 (41%), Gaps = 10/206 (4%)
Query: 59  LGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERL 118
           LG  V ++  D+++       VD  V++FG++D + NNAGI        LD    + + +
Sbjct: 77  LGARVIFLRADLADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTI 136
Query: 119 INVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPA---YTISKYGILGLVK 175
           + VN  G     +   +  +           +  +  A   SP    Y  SK G+    +
Sbjct: 137 VGVNLRGTVFFTQAVLKAXLASDARASRSIINITSVSAVXTSPERLDYCXSKAGLAAFSQ 196
Query: 176 CLAAELGQYGIRVNCVSPYGLATGMS--MKGGVDPALIESSMSQMGNLKGEFLKTDGIAN 233
            LA  L + GI V  V P  + +  +  + G  D  LIES +         + + + I N
Sbjct: 197 GLALRLAETGIAVFEVRPGIIRSDXTAAVSGKYD-GLIESGLVPX----RRWGEPEDIGN 251
Query: 234 AALYLASDESSYVSGQNLVVDGGFSV 259
               LA  +  + +G  +  DGG S+
Sbjct: 252 IVAGLAGGQFGFATGSVIQADGGLSI 277

>pdb|1P44|A Chain A, Targeting Tuberculosis And Malaria Through Inhibition Of Enoyl Reductase: Compound Activity And Structural Data Length = 269

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/243 (22%), Positives = 99/243 (40%), Gaps = 31/243 (12%)
Query: 36  HENGAKVVIADVQD-KLGEDLADKLGQDVCYIHCDISNEDEVINL---VDTAVSKFGKLD 91
            E GA++V+      +L + + D+L      +  D+ NE+ + +L   V  A+    KLD
Sbjct: 30  QEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAGNKLD 89
Query: 92  IMYNNAGILDRS---FGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCIL-- 146
            + ++ G + ++        D P +D+ + I+++       AK    +M P   G I+  
Sbjct: 90  GVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP--GGSIVGM 147
Query: 147 -FTASACTEIAGLGSPAY---TISKYGILGLVKCLAAELGQYGIRVNCVSPYGLAT---- 198
            F  S          PAY   T++K  +  + + +A E G+YG+R N V+   + T    
Sbjct: 148 DFDPSRAM-------PAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMS 200
Query: 199 -----GMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVV 253
                 +  + G    L+E    Q   +         +A     L SD     +G  +  
Sbjct: 201 AIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVAKTVCALLSDWLPATTGDIIYA 260
Query: 254 DGG 256
           DGG
Sbjct: 261 DGG 263

>pdb|1BVR|A Chain A, M.Tb. Enoyl-Acp Reductase (Inha) In Complex With Nad+ And C16-Fatty- Acyl-Substrate Length = 268

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/243 (22%), Positives = 99/243 (40%), Gaps = 31/243 (12%)
Query: 36  HENGAKVVIADVQD-KLGEDLADKLGQDVCYIHCDISNEDEVINL---VDTAVSKFGKLD 91
            E GA++V+      +L + + D+L      +  D+ NE+ + +L   V  A+    KLD
Sbjct: 29  QEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAGNKLD 88
Query: 92  IMYNNAGILDRS---FGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCIL-- 146
            + ++ G + ++        D P +D+ + I+++       AK    +M P   G I+  
Sbjct: 89  GVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP--GGSIVGM 146
Query: 147 -FTASACTEIAGLGSPAY---TISKYGILGLVKCLAAELGQYGIRVNCVSPYGLAT---- 198
            F  S          PAY   T++K  +  + + +A E G+YG+R N V+   + T    
Sbjct: 147 DFDPSRAM-------PAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMS 199
Query: 199 -----GMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVV 253
                 +  + G    L+E    Q   +         +A     L SD     +G  +  
Sbjct: 200 AIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVAKTVCALLSDWLPATTGDIIYA 259
Query: 254 DGG 256
           DGG
Sbjct: 260 DGG 262

>pdb|3OF2|A Chain A, Crystal Structure Of Inha_t266d:nadh Complex Length = 269

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/243 (22%), Positives = 99/243 (40%), Gaps = 31/243 (12%)
Query: 36  HENGAKVVIADVQD-KLGEDLADKLGQDVCYIHCDISNEDEVINL---VDTAVSKFGKLD 91
            E GA++V+      +L + + D+L      +  D+ NE+ + +L   V  A+    KLD
Sbjct: 30  QEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAGNKLD 89
Query: 92  IMYNNAGILDRS---FGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCIL-- 146
            + ++ G + ++        D P +D+ + I+++       AK    +M P   G I+  
Sbjct: 90  GVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP--GGSIVGM 147
Query: 147 -FTASACTEIAGLGSPAY---TISKYGILGLVKCLAAELGQYGIRVNCVSPYGLAT---- 198
            F  S          PAY   T++K  +  + + +A E G+YG+R N V+   + T    
Sbjct: 148 DFDPSRAM-------PAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMS 200
Query: 199 -----GMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVV 253
                 +  + G    L+E    Q   +         +A     L SD     +G  +  
Sbjct: 201 AIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVAKTVCALLSDWLPATTGDIIYA 260
Query: 254 DGG 256
           DGG
Sbjct: 261 DGG 263

>pdb|2H9I|A Chain A, Mycobacterium Tuberculosis Inha Bound With Eth-Nad Adduct Length = 268

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/243 (22%), Positives = 99/243 (40%), Gaps = 31/243 (12%)
Query: 36  HENGAKVVIADVQD-KLGEDLADKLGQDVCYIHCDISNEDEVINL---VDTAVSKFGKLD 91
            E GA++V+      +L + + D+L      +  D+ NE+ + +L   V  A+    KLD
Sbjct: 29  QEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAGNKLD 88
Query: 92  IMYNNAGILDRS---FGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCIL-- 146
            + ++ G + ++        D P +D+ + I+++       AK    +M P   G I+  
Sbjct: 89  GVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP--GGSIVGM 146
Query: 147 -FTASACTEIAGLGSPAY---TISKYGILGLVKCLAAELGQYGIRVNCVSPYGLAT---- 198
            F  S          PAY   T++K  +  + + +A E G+YG+R N V+   + T    
Sbjct: 147 DFDPSRAM-------PAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMS 199
Query: 199 -----GMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVV 253
                 +  + G    L+E    Q   +         +A     L SD     +G  +  
Sbjct: 200 AIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVAKTVCALLSDWLPATTGDIIYA 259
Query: 254 DGG 256
           DGG
Sbjct: 260 DGG 262

>pdb|2IE0|A Chain A, Crystal Structure Of Isoniazid-Resistant I21v Enoyl-Acp(Coa) Reductase Mutant Enzyme From Mycobacterium Tuberculosis In Complex With Nadh- Inh Length = 268

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/243 (22%), Positives = 99/243 (40%), Gaps = 31/243 (12%)
Query: 36  HENGAKVVIADVQD-KLGEDLADKLGQDVCYIHCDISNEDEVINL---VDTAVSKFGKLD 91
            E GA++V+      +L + + D+L      +  D+ NE+ + +L   V  A+    KLD
Sbjct: 29  QEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAGNKLD 88
Query: 92  IMYNNAGILDRS---FGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCIL-- 146
            + ++ G + ++        D P +D+ + I+++       AK    +M P   G I+  
Sbjct: 89  GVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP--GGSIVGM 146
Query: 147 -FTASACTEIAGLGSPAY---TISKYGILGLVKCLAAELGQYGIRVNCVSPYGLAT---- 198
            F  S          PAY   T++K  +  + + +A E G+YG+R N V+   + T    
Sbjct: 147 DFDPSRAM-------PAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMS 199
Query: 199 -----GMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVV 253
                 +  + G    L+E    Q   +         +A     L SD     +G  +  
Sbjct: 200 AIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVAKTVCALLSDWLPATTGDIIYA 259
Query: 254 DGG 256
           DGG
Sbjct: 260 DGG 262

>pdb|3IAH|A Chain A, Crystal Structure Of Short Chain Dehydrogenase (ycik) From Salmonella Enterica Subsp. Enterica Serovar Typhimurium Str. Lt2 In Complex With Nadp And Acetate. Length = 256

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/151 (22%), Positives = 65/151 (43%), Gaps = 3/151 (1%)
Query: 50  KLGEDLADKLGQDVCYIHCDI--SNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSI 107
           ++ + +AD+      +   D+     +E   + D   + + +LD + +NAG+L    G  
Sbjct: 54  RVAQHIADEQHVQPQWFTLDLLTCTAEECRQVADRIAAHYPRLDGVLHNAGLLG-EIGPX 112
Query: 108 LDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISK 167
            +      + +  VN    F   +    +++    G ++FT+S+          AY  SK
Sbjct: 113 SEQDPQIWQDVXQVNVNATFXLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYATSK 172
Query: 168 YGILGLVKCLAAELGQYGIRVNCVSPYGLAT 198
           +   G  + LA E     +RVNC++P G  T
Sbjct: 173 FATEGXXQVLADEYQNRSLRVNCINPGGTRT 203

>pdb|3NYW|A Chain A, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg) From Bacteroides Thetaiotaomicron Length = 250

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 52/121 (42%), Gaps = 3/121 (2%)
Query: 85  SKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGC 144
            K+G +DI+ N A       GS L  P  +  ++  +N I  +   K    +   Q+ G 
Sbjct: 83  QKYGAVDILVNAAAXFXD--GS-LSEPVDNFRKIXEINVIAQYGILKTVTEIXKVQKNGY 139
Query: 145 ILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKG 204
           I   AS   +        Y  +K+ +LGL + L  EL   GIRV  + P  + T  + K 
Sbjct: 140 IFNVASRAAKYGFADGGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDXAKKA 199
Query: 205 G 205
           G
Sbjct: 200 G 200

>pdb|3F5Q|A Chain A, Crystal Structure Of Putative Short Chain Dehydrogenase From Escherichia Coli Cft073 Length = 262

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 58/117 (49%), Gaps = 8/117 (6%)
Query: 87  FGKLDIMYNNAGILDRSFGSILDTPKSD---LERLINVNTIGGFLGAKHAARVMVPQQKG 143
           + +LD + +NAG+L    G +    + D    + ++ VN    F+  +    +++    G
Sbjct: 92  YPRLDGVLHNAGLL----GDVCPMSEQDPQVWQDVMQVNVNATFMLTQALLPLLLKSDAG 147
Query: 144 CILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGM 200
            ++FT+S+          AY  SK+   G+++ LA E  Q  +RVNC++P G  T M
Sbjct: 148 SLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEYQQR-LRVNCINPGGTRTAM 203

>pdb|2NV6|A Chain A, Mycobacterium Tuberculosis Inha (S94a) Bound With Inh-Nad Adduct Length = 268

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/243 (22%), Positives = 98/243 (40%), Gaps = 31/243 (12%)
Query: 36  HENGAKVVIADVQD-KLGEDLADKLGQDVCYIHCDISNEDEVINL---VDTAVSKFGKLD 91
            E GA++V+      +L + + D+L      +  D+ NE+ + +L   V  A+    KLD
Sbjct: 29  QEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAGNKLD 88
Query: 92  IMYNNAGILDRS---FGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCIL-- 146
            + +  G + ++        D P +D+ + I+++       AK    +M P   G I+  
Sbjct: 89  GVVHAIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP--GGSIVGM 146
Query: 147 -FTASACTEIAGLGSPAY---TISKYGILGLVKCLAAELGQYGIRVNCVSPYGLAT---- 198
            F  S          PAY   T++K  +  + + +A E G+YG+R N V+   + T    
Sbjct: 147 DFDPSRAM-------PAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMS 199
Query: 199 -----GMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVV 253
                 +  + G    L+E    Q   +         +A     L SD     +G  +  
Sbjct: 200 AIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVAKTVCALLSDWLPATTGDIIYA 259
Query: 254 DGG 256
           DGG
Sbjct: 260 DGG 262

>pdb|2IEB|A Chain A, Crystal Structure Of Isoniazid-Resistant S94a Enoyl-Acp(Coa) Reductase Mutant Enzyme From Mycobacterium Tuberculosis In Complex With Nadh- Inh Length = 268

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/243 (22%), Positives = 98/243 (40%), Gaps = 31/243 (12%)
Query: 36  HENGAKVVIADVQD-KLGEDLADKLGQDVCYIHCDISNEDEVINL---VDTAVSKFGKLD 91
            E GA++V+      +L + + D+L      +  D+ NE+ + +L   V  A+    KLD
Sbjct: 29  QEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAGNKLD 88
Query: 92  IMYNNAGILDRS---FGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCIL-- 146
            + +  G + ++        D P +D+ + I+++       AK    +M P   G I+  
Sbjct: 89  GVVHAIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP--GGSIVGM 146
Query: 147 -FTASACTEIAGLGSPAY---TISKYGILGLVKCLAAELGQYGIRVNCVSPYGLAT---- 198
            F  S          PAY   T++K  +  + + +A E G+YG+R N V+   + T    
Sbjct: 147 DFDPSRAM-------PAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMS 199
Query: 199 -----GMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVV 253
                 +  + G    L+E    Q   +         +A     L SD     +G  +  
Sbjct: 200 AIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVAKTVCALLSDWLPATTGDIIYA 259
Query: 254 DGG 256
           DGG
Sbjct: 260 DGG 262

>pdb|2AQK|A Chain A, Crystal Structure Of Isoniazid-Resistant S94a Enoyl-Acp(Coa) Reductase Mutant Enzyme From Mycobacterium Tuberculosis In Complex With Nadh Length = 269

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/243 (22%), Positives = 98/243 (40%), Gaps = 31/243 (12%)
Query: 36  HENGAKVVIADVQD-KLGEDLADKLGQDVCYIHCDISNEDEVINL---VDTAVSKFGKLD 91
            E GA++V+      +L + + D+L      +  D+ NE+ + +L   V  A+    KLD
Sbjct: 30  QEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAGNKLD 89
Query: 92  IMYNNAGILDRS---FGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCIL-- 146
            + +  G + ++        D P +D+ + I+++       AK    +M P   G I+  
Sbjct: 90  GVVHAIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP--GGSIVGM 147
Query: 147 -FTASACTEIAGLGSPAY---TISKYGILGLVKCLAAELGQYGIRVNCVSPYGLAT---- 198
            F  S          PAY   T++K  +  + + +A E G+YG+R N V+   + T    
Sbjct: 148 DFDPSRAM-------PAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMS 200
Query: 199 -----GMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVV 253
                 +  + G    L+E    Q   +         +A     L SD     +G  +  
Sbjct: 201 AIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVAKTVCALLSDWLPATTGDIIYA 260
Query: 254 DGG 256
           DGG
Sbjct: 261 DGG 263

>pdb|2XOX|A Chain A, Crystal Structure Of Pteridine Reductase (Ptr1) From Leishmania Donovani Length = 288

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 91/209 (43%), Gaps = 37/209 (17%)
Query: 78  NLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGG----------- 126
           +LV    + +G+ D++ NNA        S   TP    +   +V  +G            
Sbjct: 91  DLVAACYTHWGRCDVLVNNAS-------SFYPTPLLRKDEDGHVPCVGDREAMEAAAADL 143
Query: 127 ---------FLGAKHAARVM-VP-QQKGC---ILFTASACTEIAGLGSPAYTISKYGILG 172
                    FL    A RV   P +Q+G    I+    A T    LG   YT++K  + G
Sbjct: 144 FGSNAMAPYFLIKAFAHRVADTPAEQRGTNYSIVNMVDAMTSQPLLGYTIYTMAKGALEG 203
Query: 173 LVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIA 232
           L +  A EL    IRVN V P GL+    +   + PA+ E   S++   + +    + ++
Sbjct: 204 LTRSAALELAPLQIRVNGVGP-GLSV---LADDMPPAVREDYRSKVPLYQRDSSAAE-VS 258
Query: 233 NAALYLASDESSYVSGQNLVVDGGFSVVN 261
           +  ++L S ++ YV+G  + VDGG+S+  
Sbjct: 259 DVVIFLCSSKAKYVTGTCVKVDGGYSLTR 287

>pdb|2PD3|A Chain A, Crystal Structure Of The Helicobacter Pylori Enoyl-Acyl Carrier Protein Reductase In Complex With Hydroxydiphenyl Ether Compounds, Triclosan And Diclosan Length = 275

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 100/222 (45%), Gaps = 23/222 (10%)
Query: 49  DKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSF--GS 106
           +K    +A +L     Y   D+S E+   +L ++     G LD + ++     +    GS
Sbjct: 45  EKRVRPIAQELNSPYVY-ELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGS 103
Query: 107 ILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTIS 166
           +L+T KS     + ++           + + +      +L   ++   ++ LGS  Y ++
Sbjct: 104 LLETSKSAFNTAMEISVY---------SLIELTNTLKPLLNNGASVLTLSYLGSTKY-MA 153
Query: 167 KYGILGL--------VKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQM 218
            Y ++GL        V+ LA +LG++ IRVN +S   + T ++  G  D  +I       
Sbjct: 154 HYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRT-LASSGIADFRMILKWNEIN 212
Query: 219 GNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVV 260
             L+   +  + + NA +YL S  SS VSG+   VD G+ V+
Sbjct: 213 APLRKN-VSLEEVGNAGMYLLSSLSSGVSGEVHFVDAGYHVM 253

>pdb|3F5S|A Chain A, Crystal Structure Of Putatitve Short Chain Dehydrogenase From Shigella Flexneri 2a Str. 301 Length = 255

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 58/123 (47%), Gaps = 2/123 (1%)
Query: 78  NLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVM 137
            L    V  + +LD + +NAG+L          P+   + ++ +N    F+  +    ++
Sbjct: 79  QLAQRIVVNYPRLDGVLHNAGLLGDVCPMSEQNPQV-WQDVMQINVNATFMLTQALLPLL 137
Query: 138 VPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLA 197
           +    G ++FT+S+          AY  SK+   G+++ LA E  Q  +RVNC++P G  
Sbjct: 138 LKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEYQQR-LRVNCINPGGTR 196
Query: 198 TGM 200
           T M
Sbjct: 197 TAM 199

>pdb|1W0C|A Chain A, Inhibition Of Leishmania Major Pteridine Reductase (Ptr1) By 2,4,6-Triaminoquinazoline; Structure Of The Nadp Ternary Complex. Length = 307

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 91/207 (43%), Gaps = 35/207 (16%)
Query: 79  LVDTAVSKFGKLDIMYNNAGIL------------------DRSFGSILDTPKSDLERLIN 120
           LV    + +G+ D++ NNA                     DR     ++T  +DL     
Sbjct: 111 LVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDRE---AMETATADL---FG 164
Query: 121 VNTIGG-FLGAKHAARVM-VP-QQKGC---ILFTASACTEIAGLGSPAYTISKYGILGLV 174
            N I   FL    A RV   P + +G    I+    A T    LG   YT++K  + GL 
Sbjct: 165 SNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLT 224
Query: 175 KCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANA 234
           +  A EL    IRVN V P GL+    +   + PA+ E   S++   + +    + +++ 
Sbjct: 225 RSAALELAPLQIRVNGVGP-GLSV---LVDDMPPAVWEGHRSKVPLYQRDSSAAE-VSDV 279
Query: 235 ALYLASDESSYVSGQNLVVDGGFSVVN 261
            ++L S ++ Y++G  + VDGG+S+  
Sbjct: 280 VIFLCSSKAKYITGTCVKVDGGYSLTR 306

>pdb|1E92|A Chain A, Pteridine Reductase 1 From Leishmania Major Complexed With Nadp+ And Dihydrobiopterin Length = 288

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 91/207 (43%), Gaps = 35/207 (16%)
Query: 79  LVDTAVSKFGKLDIMYNNAGIL------------------DRSFGSILDTPKSDLERLIN 120
           LV    + +G+ D++ NNA                     DR     ++T  +DL     
Sbjct: 92  LVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDRE---AMETATADL---FG 145
Query: 121 VNTIGG-FLGAKHAARVM-VP-QQKGC---ILFTASACTEIAGLGSPAYTISKYGILGLV 174
            N I   FL    A RV   P + +G    I+    A T    LG   YT++K  + GL 
Sbjct: 146 SNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLT 205
Query: 175 KCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANA 234
           +  A EL    IRVN V P GL+    +   + PA+ E   S++   + +    + +++ 
Sbjct: 206 RSAALELAPLQIRVNGVGP-GLSV---LVDDMPPAVWEGHRSKVPLYQRDSSAAE-VSDV 260
Query: 235 ALYLASDESSYVSGQNLVVDGGFSVVN 261
            ++L S ++ Y++G  + VDGG+S+  
Sbjct: 261 VIFLCSSKAKYITGTCVKVDGGYSLTR 287

>pdb|2QHX|A Chain A, Structure Of Pteridine Reductase From Leishmania Major Complexed With A Ligand Length = 328

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 92/207 (44%), Gaps = 35/207 (16%)
Query: 79  LVDTAVSKFGKLDIMYNNAG------------------ILDRSFGSILDTPKSDLERLIN 120
           LV    + +G+ D++ NNA                   + DR     ++T  +DL     
Sbjct: 132 LVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDRE---AMETATADL---FG 185
Query: 121 VNTIGG-FLGAKHAARVM-VP-QQKGC---ILFTASACTEIAGLGSPAYTISKYGILGLV 174
            N I   FL    A RV   P + +G    I+    A T    LG   YT++K  + GL 
Sbjct: 186 SNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLT 245
Query: 175 KCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANA 234
           +  A EL    IRVN V P GL+    +   + PA+ E   S++   + +    + +++ 
Sbjct: 246 RSAALELAPLQIRVNGVGP-GLSV---LVDDMPPAVWEGHRSKVPLYQRDSSAAE-VSDV 300
Query: 235 ALYLASDESSYVSGQNLVVDGGFSVVN 261
            ++L S ++ Y++G  + VDGG+S+  
Sbjct: 301 VIFLCSSKAKYITGTCVKVDGGYSLTR 327

>pdb|1E7W|A Chain A, One Active Site, Two Modes Of Reduction Correlate The Mechanism Of Leishmania Pteridine Reductase With Pterin Metabolism And Antifolate Drug Resistance In Trpanosomes Length = 291

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 91/207 (43%), Gaps = 35/207 (16%)
Query: 79  LVDTAVSKFGKLDIMYNNAGIL------------------DRSFGSILDTPKSDLERLIN 120
           LV    + +G+ D++ NNA                     DR     ++T  +DL     
Sbjct: 95  LVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDRE---AMETATADL---FG 148
Query: 121 VNTIGG-FLGAKHAARVM-VP-QQKGC---ILFTASACTEIAGLGSPAYTISKYGILGLV 174
            N I   FL    A RV   P + +G    I+    A T    LG   YT++K  + GL 
Sbjct: 149 SNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLT 208
Query: 175 KCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANA 234
           +  A EL    IRVN V P GL+    +   + PA+ E   S++   + +    + +++ 
Sbjct: 209 RSAALELAPLQIRVNGVGP-GLSV---LVDDMPPAVWEGHRSKVPLYQRDSSAAE-VSDV 263
Query: 235 ALYLASDESSYVSGQNLVVDGGFSVVN 261
            ++L S ++ Y++G  + VDGG+S+  
Sbjct: 264 VIFLCSSKAKYITGTCVKVDGGYSLTR 290

>pdb|3F1L|A Chain A, The 0.95 A Structure Of An Oxidoreductase, Ycik From E.Coli Length = 252

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 56/114 (49%), Gaps = 2/114 (1%)
Query: 87  FGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCIL 146
           + +LD + +NAG+L          P+   + ++ VN    F+  +    +++    G ++
Sbjct: 90  YPRLDGVLHNAGLLGDVCPMSEQNPQV-WQDVMQVNVNATFMLTQALLPLLLKSDAGSLV 148
Query: 147 FTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGM 200
           FT+S+          AY  SK+   G+++ LA E  Q  +RVNC++P G  T M
Sbjct: 149 FTSSSVGRQGRANWGAYAASKFATEGMMQVLADEYQQR-LRVNCINPGGTRTAM 201

>pdb|3ASU|A Chain A, Crystal Structure Of Serine Dehydrogenase From Escherichia Coli Length = 248

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/159 (22%), Positives = 64/159 (40%), Gaps = 1/159 (0%)
Query: 35  FHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMY 94
           F + G KV+    + +  ++L D+LG ++     D+ N   +  ++ +  +++  +DI+ 
Sbjct: 20  FIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILV 79
Query: 95  NNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTE 154
           NNAG L             D E +I+ N  G     +     MV +  G I+   S    
Sbjct: 80  NNAG-LALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGS 138
Query: 155 IAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSP 193
               G   Y  +K  +      L  +L    +RV  + P
Sbjct: 139 WPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEP 177

>pdb|3F1K|A Chain A, Crystal Structure Of Ycik From E. Coli, An Oxidoreductase, Complexed With Nadp+ At 2.6a Resolution Length = 252

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 2/114 (1%)
Query: 87  FGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCIL 146
           + +LD + +NAG+L          P+   + +  VN    F   +    +++    G ++
Sbjct: 90  YPRLDGVLHNAGLLGDVCPXSEQNPQV-WQDVXQVNVNATFXLTQALLPLLLKSDAGSLV 148
Query: 147 FTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGM 200
           FT+S+          AY  SK+   G  + LA E  Q  +RVNC++P G  T M
Sbjct: 149 FTSSSVGRQGRANWGAYAASKFATEGXXQVLADEYQQR-LRVNCINPGGTRTAM 201

>pdb|2DKN|A Chain A, Crystal Structure Of The 3-alpha-hydroxysteroid Dehydrogenase From Pseudomonas Sp. B-0831 Complexed With Nadh Length = 255

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 5/106 (4%)
Query: 162 AYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNL 221
           AY  SKY +  L +    +    G+R+N V+P  + T +      DP   ES+   +  L
Sbjct: 152 AYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPRYGESTRRFVAPL 211
Query: 222 KGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVVNPTVMRA 267
            G   +   +A A  +L   ++S++ G  L VDGG       +MRA
Sbjct: 212 -GRGSEPREVAEAIAFLLGPQASFIHGSVLFVDGGMD----ALMRA 252

>pdb|3P19|A Chain A, Improved Nadph-Dependent Blue Fluorescent Protein Length = 266

Iteration: 1
 Score = 40.8 bits (94), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 40/184 (21%), Positives = 77/184 (41%), Gaps = 28/184 (15%)
Query: 81  DTAVSK----FGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARV 136
           DTA+++    +G  D + NNAG++    G I     ++ +R+ +VN +G   G +     
Sbjct: 75  DTAITRAEKIYGPADAIVNNAGMM--LLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAP 132
Query: 137 MVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGL 196
           M  +  G I+  +S   +       AY  +K+ +  + + +  E+    +RV  ++P  +
Sbjct: 133 MKARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAV 192
Query: 197 -------ATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQ 249
                   T   +K G D   ++          G  L  D +A A L+      +Y   Q
Sbjct: 193 KTELLSHTTSQQIKDGYDAWRVD---------MGGVLAADDVARAVLF------AYQQPQ 237
Query: 250 NLVV 253
           N+ +
Sbjct: 238 NVCI 241

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	272
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	1e-124
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	4e-99
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	2e-92
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	4e-90
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	3e-89
4dqx_A	277	Probable oxidoreductase protein; structural genomi	4e-89
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	4e-89
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	2e-88
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	2e-86
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	4e-86
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	8e-85
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	2e-84
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	4e-83
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	7e-82
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	1e-81
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	2e-81
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	5e-81
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	4e-80
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	5e-79
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	1e-78
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	2e-78
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	2e-78
1spx_A	278	Short-chain reductase family member (5L265); paral	3e-78
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	4e-77
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	6e-77
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	6e-77
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	2e-76
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	1e-75
1xhl_A	297	Short-chain dehydrogenase/reductase family member	1e-75
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	7e-75
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	1e-74
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	3e-74
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	3e-74
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	4e-74
1xkq_A	280	Short-chain reductase family member (5D234); parra	7e-74
4e4y_A	244	Short chain dehydrogenase family protein; structur	1e-73
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	2e-73
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	2e-73
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	9e-73
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	2e-72
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	6e-72
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	2e-71
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	7e-71
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	7e-71
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	8e-71
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	9e-71
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	2e-70
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	8e-70
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	8e-70
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	1e-69
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	2e-69
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	4e-69
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	6e-69
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	9e-69
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	2e-68
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	3e-68
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	6e-68
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	9e-68
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	4e-67
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	7e-67
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	4e-66
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	5e-66
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	6e-66
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	7e-66
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	1e-65
1xq1_A	266	Putative tropinone reducatse; structural genomics,	1e-65
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	2e-65
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	2e-65
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	4e-65
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	4e-65
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	7e-65
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	9e-65
3cxt_A	291	Dehydrogenase with different specificities; rossma	9e-65
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	1e-64
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	3e-64
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	3e-64
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	4e-64
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	6e-64
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	7e-64
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	1e-63
3imf_A	257	Short chain dehydrogenase; structural genomics, in	2e-63
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	3e-63
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	3e-63
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	3e-63
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	3e-63
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	9e-63
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	5e-62
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	7e-62
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	4e-61
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	5e-61
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	1e-60
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	1e-60
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	2e-60
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	1e-59
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	2e-59
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	4e-59
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	4e-59
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	8e-59
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	1e-58
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	1e-58
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	2e-58
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	2e-58
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	2e-58
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	2e-58
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	2e-58
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	3e-58
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	3e-58
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	4e-58
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	8e-58
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	1e-57
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	2e-57
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	3e-57
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	4e-57
3rih_A	293	Short chain dehydrogenase or reductase; structural	8e-57
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	1e-56
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	3e-56
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	4e-56
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	7e-56
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	1e-55
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	2e-55
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	6e-55
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	9e-55
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	2e-54
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	8e-54
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	1e-53
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	1e-53
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	3e-53
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	7e-53
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	2e-52
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	8e-52
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	1e-51
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	1e-51
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	3e-51
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	4e-51
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	5e-51
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	6e-51
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	2e-50
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	2e-50
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	2e-50
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	7e-50
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	2e-49
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	5e-49
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	5e-49
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	8e-49
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	1e-48
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	2e-48
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	3e-48
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	4e-48
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	6e-48
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	1e-47
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	6e-47
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	1e-46
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	1e-46
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	2e-46
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	3e-46
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	4e-46
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	5e-46
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	7e-46
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	5e-41
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	1e-45
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	2e-45
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	6e-44
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	1e-42
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	1e-42
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	1e-42
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	2e-42
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	7e-42
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	4e-41
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	9e-38
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	5e-36
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	5e-36
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	8e-36
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	2e-33
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	3e-33
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	7e-33
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	2e-32
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	7e-32
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	7e-31
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	8e-31
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	3e-29
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	3e-29
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	1e-25
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	1e-24
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	2e-24
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	4e-24
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	4e-24
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	1e-23
4alk_A	282	ENR, enoyl-[acyl-carrier-protein] reductase [NADPH	1e-23
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	2e-23
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	2e-23
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	3e-23
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	5e-23
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	9e-23
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	1e-22
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	3e-22
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	5e-21
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	6e-21
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	1e-14
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	3e-14
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	6e-13
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	1e-12
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	3e-09
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	1e-08
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	8e-06
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	8e-05
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	2e-04
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	3e-04
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	5e-04

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score =  353 bits (909), Expect = e-124
 Identities = 129/272 (47%), Positives = 176/272 (64%), Gaps = 5/272 (1%)

Query: 1   MNGPSSAAPF-KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL 59
           M   S+      RL+ KVAIITGGA GIG    +LF   GAKVVIAD+ D  G+ + + +
Sbjct: 1   MGSTSTPDSSTNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNI 60

Query: 60  GQD--VCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLER 117
           G    + ++HCD++ +++V NLVDT ++K GKLDIM+ N G+L  +  SIL+    D +R
Sbjct: 61  GSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKR 120

Query: 118 LINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSP-AYTISKYGILGLVKC 176
           ++++N  G FL AKHAARVM+P +KG I+FTAS  +  AG G    YT +K+ +LGL   
Sbjct: 121 VMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTS 180

Query: 177 LAAELGQYGIRVNCVSPYGLATGMSMKG-GVDPALIESSMSQMGNLKGEFLKTDGIANAA 235
           L  ELG+YGIRVNCVSPY +A+ +     GVD + +E    Q  NLKG  L+ + +A+A 
Sbjct: 181 LCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAV 240

Query: 236 LYLASDESSYVSGQNLVVDGGFSVVNPTVMRA 267
            YLA DES YVSG NLV+DGG++  NP    A
Sbjct: 241 AYLAGDESKYVSGLNLVIDGGYTRTNPAFPTA 272

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score =  289 bits (743), Expect = 4e-99
 Identities = 90/248 (36%), Positives = 131/248 (52%), Gaps = 11/248 (4%)

Query: 11  KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDI 70
            RL GKVA+++GGA G+GA  V      GAKVV  D+ D+ G+ +A +L     Y+H D+
Sbjct: 3   GRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDV 62

Query: 71  SNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGA 130
           +   +    VDTAV+ FG L ++ NNAGIL+   G+I D   ++ +R+++VN  G FLG 
Sbjct: 63  TQPAQWKAAVDTAVTAFGGLHVLVNNAGILN--IGTIEDYALTEWQRILDVNLTGVFLGI 120

Query: 131 KHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNC 190
           +   + M    +G I+  +S       +    YT +K+ + GL K  A ELG  GIRVN 
Sbjct: 121 RAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNS 180

Query: 191 VSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQN 250
           + P  + T M+     D               G   +   ++N  +YLASDESSY +G  
Sbjct: 181 IHPGLVKTPMTDWVPEDIFQT---------ALGRAAEPVEVSNLVVYLASDESSYSTGAE 231

Query: 251 LVVDGGFS 258
            VVDGG  
Sbjct: 232 FVVDGGTV 239

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score =  272 bits (698), Expect = 2e-92
 Identities = 80/251 (31%), Positives = 121/251 (48%), Gaps = 6/251 (2%)

Query: 11  KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDI 70
            RL+GKVA++TGGASG+G   V+L    GAKV  +D+ +  G+ LA +LG+   ++  D+
Sbjct: 2   NRLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDV 61

Query: 71  SNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGA 130
           S+E +   ++     + G L+++ NNAGIL    G +      D  RL+ +NT   F+G 
Sbjct: 62  SSEADWTLVMAAVQRRLGTLNVLVNNAGIL--LPGDMETGRLEDFSRLLKINTESVFIGC 119

Query: 131 KHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQ--YGIRV 188
           +     M  +  G I+  AS  + +       Y+ SK  +  L +  A    +  Y IRV
Sbjct: 120 QQGIAAMK-ETGGSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRV 178

Query: 189 NCVSPYGLATGMSMKGGVDPALIESSMSQMG-NLKGEFLKTDGIANAALYLASDESSYVS 247
           N + P G+ T M           E  +     N  G     + IA   L+LASDESS +S
Sbjct: 179 NSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDESSVMS 238

Query: 248 GQNLVVDGGFS 258
           G  L  D    
Sbjct: 239 GSELHADNSIL 249

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score =  267 bits (685), Expect = 4e-90
 Identities = 82/261 (31%), Positives = 128/261 (49%), Gaps = 5/261 (1%)

Query: 1   MNGPSSAAPFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLG 60
                 +     L GKVAI+TG  +GIG        + G  V+ AD+     +  A K+G
Sbjct: 15  QTQGPGSMNHPDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIG 74

Query: 61  QDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLIN 120
                   D+S+E ++I +VD  V+ FG +D +  NAG++     S++DT   D +R+I 
Sbjct: 75  CGAAACRVDVSDEQQIIAMVDACVAAFGGVDKLVANAGVV--HLASLIDTTVEDFDRVIA 132

Query: 121 VNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAE 180
           +N  G +L  KHAA  M+ +  G I+  +S   ++A  G+ AY +SK GI+ L +  AAE
Sbjct: 133 INLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITAAE 192

Query: 181 LGQYGIRVNCVSPYGLATGM--SMKGGVDPALIESSMSQMGNLK-GEFLKTDGIANAALY 237
           L   GIR N + P  + T M  +     D AL       M     G     + +A   ++
Sbjct: 193 LRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAGIVVF 252

Query: 238 LASDESSYVSGQNLVVDGGFS 258
           L SD++S ++G   + DGG  
Sbjct: 253 LLSDDASMITGTTQIADGGTI 273

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score =  264 bits (677), Expect = 3e-89
 Identities = 88/250 (35%), Positives = 122/250 (48%), Gaps = 9/250 (3%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDIS 71
            L GK  IITGGA G+GA A       GA+VV+ADV D+ G   A +LG    Y H D++
Sbjct: 2   DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVT 61

Query: 72  NEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAK 131
            E++   +V  A  +FG +D + NNAGI   +   +         +++ +N  G F+G K
Sbjct: 62  IEEDWQRVVAYAREEFGSVDGLVNNAGIS--TGMFLETESVERFRKVVEINLTGVFIGMK 119

Query: 132 HAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCV 191
                M     G I+  +SA   +    + +Y  SK+G+ GL K  A ELG   IRVN V
Sbjct: 120 TVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSV 179

Query: 192 SPYGLATGMSMKGGVDPALIESSMSQ--MGNLKGEFLKTDGIANAALYLASDESSYVSGQ 249
            P    T M+          E +     MG +  E      IA A + L SD SSYV+G 
Sbjct: 180 HPGMTYTPMT--AETGIRQGEGNYPNTPMGRVGNE---PGEIAGAVVKLLSDTSSYVTGA 234

Query: 250 NLVVDGGFSV 259
            L VDGG++ 
Sbjct: 235 ELAVDGGWTT 244

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score =  264 bits (678), Expect = 4e-89
 Identities = 82/270 (30%), Positives = 131/270 (48%), Gaps = 12/270 (4%)

Query: 1   MNGPSSAAPFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLG 60
           +   +       L  +V I+TGG SGIG    ELF +NGA VV+ADV +     +A+++G
Sbjct: 13  LGTENLYFQSMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIG 72

Query: 61  QDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLIN 120
                +  D+S+  +  ++V+   +K+G++D++ NNAG    + G+++  P+   +R+++
Sbjct: 73  SKAFGVRVDVSSAKDAESMVEKTTAKWGRVDVLVNNAGFG--TTGNVVTIPEETWDRIMS 130

Query: 121 VNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGL----GSPAYTISKYGILGLVKC 176
           VN  G FL +K+   VM     G I+ T S               AY  SK  I  L + 
Sbjct: 131 VNVKGIFLCSKYVIPVMRRNGGGSIINTTS----YTATSAIADRTAYVASKGAISSLTRA 186

Query: 177 LAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLK--GEFLKTDGIANA 234
           +A +  + GIRVN V+P  + +    K   +        S              + IA A
Sbjct: 187 MAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVMDRMGTAEEIAEA 246

Query: 235 ALYLASDESSYVSGQNLVVDGGFSVVNPTV 264
            L+LASD S + +G  L VDGG S+ N  V
Sbjct: 247 MLFLASDRSRFATGSILTVDGGSSIGNHLV 276

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score =  264 bits (678), Expect = 4e-89
 Identities = 74/256 (28%), Positives = 122/256 (47%), Gaps = 7/256 (2%)

Query: 11  KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDI 70
             LE KVAIITG   GIG     +    GA+VV+AD+ +      A  +G+   +   D+
Sbjct: 7   AELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDL 66

Query: 71  SNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGA 130
           +NE  V  L+D  +  FG+LDI+ NNA   D +   +        +    VN  G  L  
Sbjct: 67  TNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMC 126

Query: 131 KHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNC 190
           K+A   ++    G I+  +SA    A   S AY  +K  I  L + +A + G++G+R N 
Sbjct: 127 KYAIPRLISAGGGAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVATQYGRHGVRCNA 186

Query: 191 VSPYGLATGMSMKGGVDPALIESSMSQ--MGNLKGEFLKTDGIANAALYLASDESSYVSG 248
           ++P  + T   ++ G+   +++   +    G + GE      IA    +LASD +++++G
Sbjct: 187 IAPGLVRTPR-LEVGLPQPIVDIFATHHLAGRI-GE---PHEIAELVCFLASDRAAFITG 241

Query: 249 QNLVVDGGFSVVNPTV 264
           Q +  D G     P +
Sbjct: 242 QVIAADSGLLAHLPGL 257

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score =  263 bits (674), Expect = 2e-88
 Identities = 94/260 (36%), Positives = 126/260 (48%), Gaps = 13/260 (5%)

Query: 11  KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIH 67
            RLEGK+AI+TG +SGIG  A  LF   GAKVV+         +L D++   G +   + 
Sbjct: 4   SRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALA 63

Query: 68  CDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGF 127
            D+ +E     LV+ AV +FG LD  +NNAG L    G I           ++ N    F
Sbjct: 64  GDVGDEALHEALVELAVRRFGGLDTAFNNAGALGA-MGEISSLSVEGWRETLDTNLTSAF 122

Query: 128 LGAKHAARVMVPQQKGCILFTASACTEIAGL-GSPAYTISKYGILGLVKCLAAELGQYGI 186
           L AK+    +     G + FT+S     AG  G   Y  SK G++GLV+ LA ELG  GI
Sbjct: 123 LAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVELGARGI 182

Query: 187 RVNCVSPYGLATGMSMK--GGVDPALIESSMSQ--MGNLKGEFLKTDGIANAALYLASDE 242
           RVN + P G  T  +     G  P           +  +       + IA AALYLASD 
Sbjct: 183 RVNALLPGGTDTPANFANLPGAAPETRGFVEGLHALKRI-AR---PEEIAEAALYLASDG 238

Query: 243 SSYVSGQNLVVDGGFSVVNP 262
           +S+V+G  L+ DGG SV   
Sbjct: 239 ASFVTGAALLADGGASVTKA 258

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score =  257 bits (660), Expect = 2e-86
 Identities = 71/263 (26%), Positives = 128/263 (48%), Gaps = 10/263 (3%)

Query: 5   SSAAPFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQ--- 61
           ++++P  R   +V +ITGG SG+G          GAK+ + DV  +  E     + +   
Sbjct: 3   ATSSPTTRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAP 62

Query: 62  --DVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLI 119
             +V     D+S+E +V   V     +FG++D  +NNAGI  +          ++ ++++
Sbjct: 63  DAEVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGK-QNPTESFTAAEFDKVV 121

Query: 120 NVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAA 179
           ++N  G FLG +   ++M  Q  G ++ TAS            Y  +K+G++GL +  A 
Sbjct: 122 SINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAV 181

Query: 180 ELGQYGIRVNCVSPYGLATGM--SMKGGVDPALIESSMSQMGNLK--GEFLKTDGIANAA 235
           E G+YGIR+N ++P  + T M  +    +DP     +  +   +     + +   IA   
Sbjct: 182 EYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVV 241

Query: 236 LYLASDESSYVSGQNLVVDGGFS 258
            +L SD++SYV+   + +DGG S
Sbjct: 242 AFLLSDDASYVNATVVPIDGGQS 264

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score =  256 bits (656), Expect = 4e-86
 Identities = 75/254 (29%), Positives = 133/254 (52%), Gaps = 4/254 (1%)

Query: 10  FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYI 66
           ++ L+ KV I+TG  SGIG    + F  N + VV  ++ +     +  +L   G++V  +
Sbjct: 2   YQSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGV 61

Query: 67  HCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGG 126
             D+S + +V   V      + ++D++ NNAGI+      + +      ER++ VN    
Sbjct: 62  KADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIM-DGVTPVAEVSDELWERVLAVNLYSA 120

Query: 127 FLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGI 186
           F  ++    +M+ Q KG I+ TAS      G     YT++K+G++GL + +AA  G  GI
Sbjct: 121 FYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYGDQGI 180

Query: 187 RVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYV 246
           R   V P  + T + +       L   +++++ +L     + + IAN  ++LASDE+S+V
Sbjct: 181 RAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPEDIANVIVFLASDEASFV 240

Query: 247 SGQNLVVDGGFSVV 260
           +G  +VVDGG +V+
Sbjct: 241 NGDAVVVDGGLTVL 254

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score =  253 bits (649), Expect = 8e-85
 Identities = 73/250 (29%), Positives = 124/250 (49%), Gaps = 6/250 (2%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDIS 71
           R  GKV ++TGG  GIGA  V  F  +GA+VVI D  +  G  L  +L     +I CD++
Sbjct: 6   RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP-GAVFILCDVT 64

Query: 72  NEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAK 131
            ED+V  LV   + +FG+LD + NNAG          +T      +L+ +N +G +   K
Sbjct: 65  QEDDVKTLVSETIRRFGRLDCVVNNAGHHPPP-QRPEETSAQGFRQLLELNLLGTYTLTK 123

Query: 132 HAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCV 191
            A   +  + +G ++  +S    I    +  Y  +K  +  + K LA +   YG+RVNC+
Sbjct: 124 LALPYLR-KSQGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCI 182

Query: 192 SPYGLATGMSMKGGVDPALIESSMSQMGNLK--GEFLKTDGIANAALYLASDESSYVSGQ 249
           SP  + T +  +         +S+ +    +  G   +   +  AA++LAS+ +++ +G 
Sbjct: 183 SPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLASE-ANFCTGI 241

Query: 250 NLVVDGGFSV 259
            L+V GG  +
Sbjct: 242 ELLVTGGAEL 251

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score =  252 bits (646), Expect = 2e-84
 Identities = 81/261 (31%), Positives = 119/261 (45%), Gaps = 13/261 (4%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDIS 71
            LEGKVA+ITG  SG G    + F + GAKVVI D      E +A ++G     +  DIS
Sbjct: 6   SLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADIS 65

Query: 72  NEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAK 131
            E +V   V+ A+SKFGK+DI+ NNAGI      +       + +R++ VN  G +L   
Sbjct: 66  KEADVDAAVEAALSKFGKVDILVNNAGI-GHKPQNAELVEPEEFDRIVGVNVRGVYLMTS 124

Query: 132 HAARVMVPQQKG----CILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIR 187
                            IL  AS            Y  +K  ++ + K LA EL    IR
Sbjct: 125 KLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNATKGWVVSVTKALAIELAPAKIR 184

Query: 188 VNCVSPYGLATGM--SMKGGVDPALIESSMSQ--MGNLKGEFLKTDGIANAALYLASDES 243
           V  ++P    T +  +  G     + +       MG L  +    D +A AA +L S ++
Sbjct: 185 VVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPMGRL-LK---PDDLAEAAAFLCSPQA 240

Query: 244 SYVSGQNLVVDGGFSVVNPTV 264
           S ++G  L VDGG S+   ++
Sbjct: 241 SMITGVALDVDGGRSIGGRSI 261

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score =  249 bits (638), Expect = 4e-83
 Identities = 85/255 (33%), Positives = 130/255 (50%), Gaps = 17/255 (6%)

Query: 11  KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDI 70
           +    KVAI+TGG+SGIG   V+     GAKVV   + +K   +++D       +   D+
Sbjct: 10  EEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSD-------HFKIDV 62

Query: 71  SNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGA 130
           +NE+EV   V+    K+G++DI+ NNAGI    +  +  TP     R+I+VN  G +L A
Sbjct: 63  TNEEEVKEAVEKTTKKYGRIDILVNNAGIE--QYSPLHLTPTEIWRRIIDVNVNGSYLMA 120

Query: 131 KHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNC 190
           K+   VM+    G I+  AS  +  A   + AY  SK+ +LGL + +A +     IR N 
Sbjct: 121 KYTIPVMLAIGHGSIINIASVQSYAATKNAAAYVTSKHALLGLTRSVAIDYAP-KIRCNA 179

Query: 191 VSPYGLATGM-----SMKGGVDPALIESSMSQMGNLK--GEFLKTDGIANAALYLASDES 243
           V P  + T M      M+ G D   +E  + + G     G   + + +A    +LASD S
Sbjct: 180 VCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVAEVVAFLASDRS 239

Query: 244 SYVSGQNLVVDGGFS 258
           S+++G  L VDGG  
Sbjct: 240 SFITGACLTVDGGLL 254

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score =  246 bits (631), Expect = 7e-82
 Identities = 72/259 (27%), Positives = 116/259 (44%), Gaps = 11/259 (4%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHC 68
                VA+ITG  SGIG         +G  V          E++AD++   G     +  
Sbjct: 25  NQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEA 84

Query: 69  DISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFL 128
           D+S+E ++ N V   V KFG LDI+  NAGI    +  I D    + +  I VN  G FL
Sbjct: 85  DVSDELQMRNAVRDLVLKFGHLDIVVANAGIN-GVWAPIDDLKPFEWDETIAVNLRGTFL 143

Query: 129 GAKHAARVMVPQQKGCILFTAS--ACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGI 186
                   +  +  G I+  +S          G+ AYT +K   + +V+ LA ELG++ I
Sbjct: 144 TLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQQLALELGKHHI 203

Query: 187 RVNCVSPYGLATGMSMK-----GGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASD 241
           RVN V P  + T +S              +E    Q+    G+  +++ +A    +L S+
Sbjct: 204 RVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAELIRFLVSE 263

Query: 242 ESSYVSGQNLVVDGGFSVV 260
            + +V+G  + +DGG  ++
Sbjct: 264 RARHVTGSPVWIDGGQGLL 282

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score =  245 bits (627), Expect = 1e-81
 Identities = 82/255 (32%), Positives = 121/255 (47%), Gaps = 14/255 (5%)

Query: 11  KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQ--DVCYIHC 68
            RL+GKVAIITGG  GIG      F E GAKV+I      +GE  A  +G    + +   
Sbjct: 2   NRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQH 61

Query: 69  DISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFL 128
           D S+ED    L D     FG +  + NNAGI      S+ +T  ++  +L+ VN  G F 
Sbjct: 62  DSSDEDGWTKLFDATEKAFGPVSTLVNNAGIA--VNKSVEETTTAEWRKLLAVNLDGVFF 119

Query: 129 GAKHAARVMVPQQKG-CILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQ--YG 185
           G +   + M  +  G  I+  +S    +      AY  SK  +  + K  A +     Y 
Sbjct: 120 GTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYD 179

Query: 186 IRVNCVSPYGLATGMSMKGGVDPALIESSMSQ--MGNLKGEFLKTDGIANAALYLASDES 243
           +RVN V P  + T + +          S  ++  MG++ GE    + IA   +YLAS+ES
Sbjct: 180 VRVNTVHPGYIKTPL-VDDLPGAEEAMSQRTKTPMGHI-GE---PNDIAYICVYLASNES 234

Query: 244 SYVSGQNLVVDGGFS 258
            + +G   VVDGG++
Sbjct: 235 KFATGSEFVVDGGYT 249

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score =  244 bits (626), Expect = 2e-81
 Identities = 74/253 (29%), Positives = 126/253 (49%), Gaps = 11/253 (4%)

Query: 15  GKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL----GQDVCYIHCDI 70
            +VAI+TG +SG G      F   G +V   D+  +  E+ A          V  +  D+
Sbjct: 2   SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADV 61

Query: 71  SNEDEVINLVDTAVSKFGKLDIMYNNAGIL-DRSFGSILDTPKSDLERLINVNTIGGFLG 129
           ++E +V   +   + +FG +D++ NNAGI  +   G +  TP    ++++ VN  G FLG
Sbjct: 62  ADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLG 121

Query: 130 AKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVN 189
            +     M+ Q  G I+  AS  + +A  G  AYT SK  +L L K +A +    GIR N
Sbjct: 122 CRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCN 181

Query: 190 CVSPYGLATGMSMKGGVDPALIESSMSQ--MGNLKGEFLKTDGIANAALYLASDESSYVS 247
            V P  + T M+      P L +  +++     + G       +A+A ++LA ++++YV+
Sbjct: 182 AVCPGMIETPMTQWRLDQPELRDQVLARIPQKEI-GT---AAQVADAVMFLAGEDATYVN 237

Query: 248 GQNLVVDGGFSVV 260
           G  LV+DG ++ +
Sbjct: 238 GAALVMDGAYTAI 250

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score =  243 bits (623), Expect = 5e-81
 Identities = 76/250 (30%), Positives = 124/250 (49%), Gaps = 7/250 (2%)

Query: 11  KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDI 70
               GK  ++TGGA GIG    + F   GA V + D++ + G+++A+ +G    +   D+
Sbjct: 2   GLFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPE-GKEVAEAIG--GAFFQVDL 58

Query: 71  SNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGA 130
            +E E +  V+ A    G++D++ NNA I   + GS L     +  R++ VN       +
Sbjct: 59  EDERERVRFVEEAAYALGRVDVLVNNAAIA--APGSALTVRLPEWRRVLEVNLTAPMHLS 116

Query: 131 KHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNC 190
             AAR M     G I+  AS     A   + AY  SK G++ L + LA +L    IRVN 
Sbjct: 117 ALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNA 176

Query: 191 VSPYGLATGMSMKGGVDPALIESSMSQMGNLK--GEFLKTDGIANAALYLASDESSYVSG 248
           V+P  +AT   ++        E +     +L       K + +A A L+LAS+++S+++G
Sbjct: 177 VAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASFITG 236

Query: 249 QNLVVDGGFS 258
             L VDGG +
Sbjct: 237 AILPVDGGMT 246

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score =  241 bits (618), Expect = 4e-80
 Identities = 75/261 (28%), Positives = 116/261 (44%), Gaps = 16/261 (6%)

Query: 11  KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIH 67
           K+  GKV ++TG    IG        E G  + + D+  +  E     +   G +     
Sbjct: 3   KKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYV 62

Query: 68  CDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGF 127
           CD+++E+ VI  VD+ V  FGK+D ++NNAG    +F  + D P  D  R++ +N  G F
Sbjct: 63  CDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGY-QGAFAPVQDYPSDDFARVLTINVTGAF 121

Query: 128 LGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIR 187
              K  +R M+ Q  G I+ TAS           AY  SK  I+ L +  A +L  Y IR
Sbjct: 122 HVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNIR 181

Query: 188 VNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLK------------GEFLKTDGIANAA 235
           VN +SP  +  G   +  V+      S     + K              +   + I    
Sbjct: 182 VNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVV 241

Query: 236 LYLASDESSYVSGQNLVVDGG 256
            +L  D+SS+++G NL + GG
Sbjct: 242 AFLLGDDSSFMTGVNLPIAGG 262

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score =  239 bits (612), Expect = 5e-79
 Identities = 70/256 (27%), Positives = 107/256 (41%), Gaps = 13/256 (5%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL------GQDVCY 65
             + +  ++TGG SGIG          GA V+I             +L      G  + Y
Sbjct: 8   SFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRY 67

Query: 66  IHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIG 125
              DI+NEDE    VD   +  G+L  + + AG    + G I         R +++N  G
Sbjct: 68  EPTDITNEDETARAVDAVTAWHGRLHGVVHCAGGS-ENIGPITQVDSEAWRRTVDLNVNG 126

Query: 126 GFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYG 185
                KHAAR MV    G  +  +S           AY ++K  +  L++  A ELG   
Sbjct: 127 TMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMQLAADELGASW 186

Query: 186 IRVNCVSPYGLATGMSMKGGVDPALIESSMSQ--MGNLKGEFLKTDGIANAALYLASDES 243
           +RVN + P  + T +         L         +    GE    + +AN A++L SD +
Sbjct: 187 VRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPLPRQ-GE---VEDVANMAMFLLSDAA 242

Query: 244 SYVSGQNLVVDGGFSV 259
           S+V+GQ + VDGG  +
Sbjct: 243 SFVTGQVINVDGGQML 258

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score =  237 bits (608), Expect = 1e-78
 Identities = 78/257 (30%), Positives = 126/257 (49%), Gaps = 18/257 (7%)

Query: 10  FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCD 69
           F  L  KV I+TG + GIG    E F + G+KV+   + D               +I CD
Sbjct: 3   FSDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGEAK--------YDHIECD 54

Query: 70  ISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLG 129
           ++N D+V   +D    ++G + ++ NNAGI   S+G I      +  R+I+VN  G +  
Sbjct: 55  VTNPDQVKASIDHIFKEYGSISVLVNNAGIE--SYGKIESMSMGEWRRIIDVNLFGYYYA 112

Query: 130 AKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVN 189
           +K A   M+  +   I+  +S    I    + AY  SK+ ++GL K +A +     +R N
Sbjct: 113 SKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAP-LLRCN 171

Query: 190 CVSPYGLATGM-----SMKGGVDPALIESSMSQMGNLK--GEFLKTDGIANAALYLASDE 242
            V P  + T +      ++ G DP  IE  +S+ G+        K   +A+A  +LAS E
Sbjct: 172 AVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASAVAFLASRE 231

Query: 243 SSYVSGQNLVVDGGFSV 259
           +S+++G  L VDGG S+
Sbjct: 232 ASFITGTCLYVDGGLSI 248

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score =  237 bits (607), Expect = 2e-78
 Identities = 66/253 (26%), Positives = 116/253 (45%), Gaps = 7/253 (2%)

Query: 11  KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDI 70
           +RL  K+A+ITG  SGIG  A + F   GA+V I   +  + +    ++G     I  D 
Sbjct: 25  QRLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADS 84

Query: 71  SNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGA 130
           +N  E+  L +   ++ G++D+++ NAG        + +  +   +   + N  G     
Sbjct: 85  ANLAELDRLYEKVKAEAGRIDVLFVNAGGGS--MLPLGEVTEEQYDDTFDRNVKGVLFTV 142

Query: 131 KHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNC 190
           + A  ++   +   ++ T S            Y  SK  +    +    +L   GIR+N 
Sbjct: 143 QKALPLL--ARGSSVVLTGSTAGSTGTPAFSVYAASKAALRSFARNWILDLKDRGIRINT 200

Query: 191 VSPYGLATGMSMK-GGVDPALIESSMSQMGNLK--GEFLKTDGIANAALYLASDESSYVS 247
           +SP    T   ++  G DP   +  ++ +      G   + + +A AAL+LASD+SS+V+
Sbjct: 201 LSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGRVGRAEEVAAAALFLASDDSSFVT 260

Query: 248 GQNLVVDGGFSVV 260
           G  L VDGG + V
Sbjct: 261 GAELFVDGGSAQV 273

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score =  237 bits (606), Expect = 2e-78
 Identities = 80/255 (31%), Positives = 130/255 (50%), Gaps = 12/255 (4%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHC 68
           RL+ +VAI+TGGA  IG   V    E GA+V+IAD+ + +     + L   G DV  +  
Sbjct: 10  RLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVM 69

Query: 69  DISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFL 128
           D++N + V N V +   + G++DI+   AGI         D       + +++N  G F 
Sbjct: 70  DVTNTESVQNAVRSVHEQEGRVDILVACAGICISE-VKAEDMTDGQWLKQVDINLNGMFR 128

Query: 129 GAKHAARVMVPQQKGCILFTASACTEIA--GLGSPAYTISKYGILGLVKCLAAELGQYGI 186
             +   R+M+ Q++G I+   S    I        AY  SK G+   ++ LAAE   +GI
Sbjct: 129 SCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYIRSLAAEWAPHGI 188

Query: 187 RVNCVSPYGLATGMSMKGGVDPALIESSMSQ--MGNLKGEFLKTDGIANAALYLASDESS 244
           R N V+P  + T ++  G   P L ++ ++   MG + G+    D +A+   +LASD +S
Sbjct: 189 RANAVAPTYIETTLTRFGMEKPELYDAWIAGTPMGRV-GQ---PDEVASVVQFLASDAAS 244

Query: 245 YVSGQNLVVDGGFSV 259
            ++G  + VD GF+V
Sbjct: 245 LMTGAIVNVDAGFTV 259

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score =  237 bits (606), Expect = 3e-78
 Identities = 81/266 (30%), Positives = 121/266 (45%), Gaps = 16/266 (6%)

Query: 11  KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL------GQDVC 64
            R   KVAIITG ++GIG     LF   GAKV I     +  E+   ++       Q+V 
Sbjct: 2   TRFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVN 61

Query: 65  YIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGIL--DRSFGSILDTPKSDLERLINVN 122
            +  D++ +     ++ T + KFGKLDI+ NNAG    D    +         +  +N+N
Sbjct: 62  SVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLN 121

Query: 123 TIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGL-GSPAYTISKYGILGLVKCLAAEL 181
                   K A   +    KG I+  +S  + +      P Y+I+K  I    +  A +L
Sbjct: 122 LRSVIALTKKAVPHLS-STKGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDL 180

Query: 182 GQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLK-----GEFLKTDGIANAAL 236
            Q+GIRVN +SP  +ATG     G+     +   S M  +K     G   +   IA    
Sbjct: 181 IQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIA 240

Query: 237 YLASDE-SSYVSGQNLVVDGGFSVVN 261
           +LA  + SSY+ G  LVVDGG S++ 
Sbjct: 241 FLADRKTSSYIIGHQLVVDGGSSLIM 266

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score =  233 bits (596), Expect = 4e-77
 Identities = 76/252 (30%), Positives = 130/252 (51%), Gaps = 11/252 (4%)

Query: 11  KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDI 70
            RL+GKV I+T  A GIG  A   F   GAKV+  D+ +   ++L    G  +     D+
Sbjct: 2   GRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPG--IQTRVLDV 59

Query: 71  SNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGA 130
           + + +    +D   ++  +LD+++N AG +    G++LD  + D +  +N+N    +L  
Sbjct: 60  TKKKQ----IDQFANEVERLDVLFNVAGFV--HHGTVLDCEEKDWDFSMNLNVRSMYLMI 113

Query: 131 KHAARVMVPQQKGCILFTASACTEIAGL-GSPAYTISKYGILGLVKCLAAELGQYGIRVN 189
           K     M+ Q+ G I+  +S  + + G+     Y+ +K  ++GL K +AA+  Q GIR N
Sbjct: 114 KAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCN 173

Query: 190 CVSPYGLATGMSMKGGVDPALIESSMSQMGNLK--GEFLKTDGIANAALYLASDESSYVS 247
           CV P  + T    +        E + +     +  G F   + IA   +YLASDES+YV+
Sbjct: 174 CVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESAYVT 233

Query: 248 GQNLVVDGGFSV 259
           G  +++DGG+S+
Sbjct: 234 GNPVIIDGGWSL 245

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score =  233 bits (597), Expect = 6e-77
 Identities = 75/260 (28%), Positives = 114/260 (43%), Gaps = 22/260 (8%)

Query: 11  KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDI 70
           KRLEGK A+ITG A GIG    E +   GA V IAD+  +     A ++G     +  D+
Sbjct: 4   KRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDV 63

Query: 71  SNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGA 130
           + +D +   +   V   G LDI+ NNA + D     I++  +   E+L  +N  G     
Sbjct: 64  TRQDSIDAAIAATVEHAGGLDILVNNAALFD--LAPIVEITRESYEKLFAINVAGTLFTL 121

Query: 131 KHAARVMVPQ-QKGCILFTASACTEIAGL----GSPAYTISKYGILGLVKCLAAELGQYG 185
           + AAR M+ Q + G I+  AS     AG         Y  +K  ++ L +    +L ++ 
Sbjct: 122 QAAARQMIAQGRGGKIINMAS----QAGRRGEALVAIYCATKAAVISLTQSAGLDLIKHR 177

Query: 186 IRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKT---------DGIANAAL 236
           I VN ++P  +        GVD           G  K    +          + +   A+
Sbjct: 178 INVNAIAPGVVDGEHWD--GVDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTGMAI 235

Query: 237 YLASDESSYVSGQNLVVDGG 256
           +LAS ES Y+  Q   VDGG
Sbjct: 236 FLASAESDYIVSQTYNVDGG 255

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score =  233 bits (597), Expect = 6e-77
 Identities = 75/264 (28%), Positives = 124/264 (46%), Gaps = 20/264 (7%)

Query: 5   SSAAPFKRLEGKVAIITGGASGIG-AMAVELFHENGAKVVIADVQDKLGEDLADKL---G 60
           +     K LE KVA++T    GIG A+A     ++GA VV++  + +  +     L   G
Sbjct: 4   TGVERRKPLENKVALVTASTDGIGLAIA-RRLAQDGAHVVVSSRKQENVDRTVATLQGEG 62

Query: 61  QDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLIN 120
             V    C +   ++   LV  AV+  G +DI+ +NA + +  FG+I+D  +   +++++
Sbjct: 63  LSVTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAV-NPFFGNIIDATEEVWDKILH 121

Query: 121 VNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGL----GSPAYTISKYGILGLVKC 176
           VN     L  K     M  +  G +L  +S    +           Y +SK  +LGL K 
Sbjct: 122 VNVKATVLMTKAVVPEMEKRGGGSVLIVSS----VGAYHPFPNLGPYNVSKTALLGLTKN 177

Query: 177 LAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQ--MGNLKGEFLKTDGIANA 234
           LA EL    IRVNC++P  + T  S    +D A  E       +  L G     +  A  
Sbjct: 178 LAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRL-GN---PEDCAGI 233

Query: 235 ALYLASDESSYVSGQNLVVDGGFS 258
             +L S+++SY++G+ +VV GG +
Sbjct: 234 VSFLCSEDASYITGETVVVGGGTA 257

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score =  233 bits (596), Expect = 2e-76
 Identities = 76/284 (26%), Positives = 125/284 (44%), Gaps = 40/284 (14%)

Query: 11  KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLG-------------EDLAD 57
            R+EGKVA +TG A G G        + GA ++  D+   +              EDLA+
Sbjct: 7   GRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAE 66

Query: 58  ------KLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTP 111
                    + +     D+ + D +   VD+ V + G+LDI+  NAGI      ++  T 
Sbjct: 67  TADLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIG-NGGDTLDKTS 125

Query: 112 KSDLERLINVNTIGGFLGAKHAARVMVPQQK-GCILFTASACTEIAGL----GSPAYTIS 166
           + D   +I++N  G +   K     M+   + G I+ T+S    + GL     +  Y  +
Sbjct: 126 EEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSS----VGGLKAYPHTGHYVAA 181

Query: 167 KYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPAL-----------IESSM 215
           K+G++GL++    ELGQ+ IRVN V P  + T M    G                +    
Sbjct: 182 KHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPIC 241

Query: 216 SQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSV 259
                L   +++   I+NA L+ ASDE+ Y++G  L +D G  +
Sbjct: 242 QMFHTLPIPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSCL 285

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score =  230 bits (590), Expect = 1e-75
 Identities = 70/258 (27%), Positives = 117/258 (45%), Gaps = 12/258 (4%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDIS 71
           +L G+VA+ITGGASG+G   V+ F   GA+V + D   +   +L    G +   +  D+ 
Sbjct: 2   KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVR 61

Query: 72  NEDEVINLVDTAVSKFGKLDIMYNNAGILDRS---FGSILDTPKSDLERLINVNTIGGFL 128
           +  +     +  ++ FGK+D +  NAGI D S        D   +  + + +VN  G   
Sbjct: 62  SLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIH 121

Query: 129 GAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRV 188
             K     +V   +G ++FT S        G P YT +K+ ++GLV+ +A EL    +RV
Sbjct: 122 AVKACLPALV-SSRGSVVFTISNAGFYPNGGGPLYTATKHAVVGLVRQMAFELAP-HVRV 179

Query: 189 NCVSPYGLATGMSMKGGVDPALIESSMSQMGNLK------GEFLKTDGIANAALYLASDE 242
           N V+P G+ T +     +  +    S   + ++       G     +    A ++ A+  
Sbjct: 180 NGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALEEYTGAYVFFATRG 239

Query: 243 -SSYVSGQNLVVDGGFSV 259
            S   +G  L  DGG  V
Sbjct: 240 DSLPATGALLNYDGGMGV 257

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score =  231 bits (591), Expect = 1e-75
 Identities = 75/264 (28%), Positives = 127/264 (48%), Gaps = 14/264 (5%)

Query: 11  KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL------GQDVC 64
            R  GK  IITG ++GIG  A  +F + GA+V I    +   E+   ++       + + 
Sbjct: 22  ARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKIN 81

Query: 65  YIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTI 124
            +  D++      ++++T ++KFGK+DI+ NNAG       +  D P    ++   +N  
Sbjct: 82  AVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQ 141

Query: 125 GGFLGAKHAARVMVPQQKGCILFTASACTEIAGL-GSPAYTISKYGILGLVKCLAAELGQ 183
                 +     ++ + KG I+  +S         G P Y  +K  +    +C A +L Q
Sbjct: 142 AVIEMTQKTKEHLI-KTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQ 200

Query: 184 YGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLK-----GEFLKTDGIANAALYL 238
           +G+RVN VSP  +ATG     G+     +   S +G+ K     G   K + IAN  ++L
Sbjct: 201 HGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFL 260

Query: 239 AS-DESSYVSGQNLVVDGGFSVVN 261
           A  + SSY+ GQ++V DGG ++V 
Sbjct: 261 ADRNLSSYIIGQSIVADGGSTLVM 284

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score =  228 bits (584), Expect = 7e-75
 Identities = 73/275 (26%), Positives = 119/275 (43%), Gaps = 33/275 (12%)

Query: 11  KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLG----------EDLAD--- 57
            +LEG+VA ITG A G G          GA ++  D+  KL           +DL++   
Sbjct: 7   GKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVR 66

Query: 58  ---KLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSD 114
                 + +     D  + D +  +VD  V+  G+LDI+  NAG+   +  +  D    D
Sbjct: 67  LVEAANRRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVA--APQAWDDITPED 124

Query: 115 LERLINVNTIGGFLGAKHAARVMVPQQK-GCILFTASACTEIAGL----GSPAYTISKYG 169
              ++++N  G +      A  ++   + G I+  +S     AG+        YT SK+ 
Sbjct: 125 FRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISS----AAGMKMQPFMIHYTASKHA 180

Query: 170 ILGLVKCLAAELGQYGIRVNCVSPYGLATGM----SMKGGVDPALIESSMSQMGN--LKG 223
           + GL +  AAELG++ IRVN V P  + T M     +            +S +    L  
Sbjct: 181 VTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFLPD 240

Query: 224 EFLKTDGIANAALYLASDESSYVSGQNLVVDGGFS 258
              + + IA+   +LASDES  V+   + VD G +
Sbjct: 241 WVAEPEDIADTVCWLASDESRKVTAAQIPVDQGST 275

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score =  227 bits (581), Expect = 1e-74
 Identities = 86/251 (34%), Positives = 123/251 (49%), Gaps = 13/251 (5%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHC 68
           RL+GK AIITG  +GIG      F   GA VV++D+       + D++   G       C
Sbjct: 8   RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRC 67

Query: 69  DISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFL 128
           DI++E E+  L D A+SK GK+DI+ NNAG          D P +D  R   +N    F 
Sbjct: 68  DITSEQELSALADFAISKLGKVDILVNNAGGGGPK---PFDMPMADFRRAYELNVFSFFH 124

Query: 129 GAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRV 188
            ++  A  M     G IL   S   E   +   +Y  SK     LV+ +A +LG+  IRV
Sbjct: 125 LSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRV 184

Query: 189 NCVSPYGLATGMSMKGGVDPALIESSMSQ--MGNLKGEFLKTDGIANAALYLASDESSYV 246
           N ++P  + T   +K  + P + +  +    +  L G+      IANAAL+L S  +S+V
Sbjct: 185 NGIAPGAILTDA-LKSVITPEIEQKMLQHTPIRRL-GQ---PQDIANAALFLCSPAASWV 239

Query: 247 SGQNLVVDGGF 257
           SGQ L V GG 
Sbjct: 240 SGQILTVSGGG 250

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score =  227 bits (580), Expect = 3e-74
 Identities = 77/281 (27%), Positives = 120/281 (42%), Gaps = 32/281 (11%)

Query: 3   GPSSAAPFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLG---------- 52
           G   A     L+G+VA ITG A G G          GA ++  D+   +           
Sbjct: 3   GSMVAGQAGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASP 62

Query: 53  EDLAD------KLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGS 106
           EDL +        G+       D+ ++  +  LV   + +FG+LD++  NAG+L  S+G 
Sbjct: 63  EDLDETARLVEDQGRKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVL--SWGR 120

Query: 107 ILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQK-GCILFTASACTEIAGL----GSP 161
           + +      + +I VN  G +   +     M+     G I+  +S     AGL    G+ 
Sbjct: 121 VWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSS----SAGLKATPGNG 176

Query: 162 AYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPAL-----IESSMS 216
            Y+ SK+G+  L   LA ELG+YGIRVN + PY + T M     +            S  
Sbjct: 177 HYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFP 236

Query: 217 QMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGF 257
            M      F+  D +A+   +LA D S  ++G  + VD G 
Sbjct: 237 PMPVQPNGFMTADEVADVVAWLAGDGSGTLTGTQIPVDKGA 277

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score =  226 bits (579), Expect = 3e-74
 Identities = 82/263 (31%), Positives = 123/263 (46%), Gaps = 14/263 (5%)

Query: 4   PSSAAPFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQ----DKLGEDLADKL 59
              A    RL+GK A+ITG   GIGA     F   GA++V++       D     L ++ 
Sbjct: 10  DRYAGVL-RLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQF 68

Query: 60  GQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLI 119
           G DV  +  D++  D    L   A   FG LD++ NNAGI       ++DT     +  I
Sbjct: 69  GTDVHTVAIDLAEPDAPAELARRAAEAFGGLDVLVNNAGISHP--QPVVDTDPQLFDATI 126

Query: 120 NVNTIGGFLGAKHAARVMVPQQK-GCILFTASACTEIAGLGSPAYTISKYGILGLVKCLA 178
            VN     L A    + MV   + G I+  ASA          AY  SK G++   K LA
Sbjct: 127 AVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCTSKAGLVMATKVLA 186

Query: 179 AELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQ--MGNLKGEFLKTDGIANAAL 236
            ELG +GIR N V P  + T M  +   D A     +++  +G           +++A +
Sbjct: 187 RELGPHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIARIPLGRF-AV---PHEVSDAVV 242

Query: 237 YLASDESSYVSGQNLVVDGGFSV 259
           +LASD +S ++G ++ VDGG+++
Sbjct: 243 WLASDAASMINGVDIPVDGGYTM 265

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score =  227 bits (581), Expect = 4e-74
 Identities = 88/288 (30%), Positives = 136/288 (47%), Gaps = 38/288 (13%)

Query: 3   GPSSAAPFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLG---------E 53
           GP S A   ++EGKVA ITG A G G          GA ++  DV  +L          +
Sbjct: 18  GPGSMA--GKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPD 75

Query: 54  DLAD------KLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSI 107
           DLA+       LG+ +     D+ + D +   VD  V++ G+LDI+  NA +       +
Sbjct: 76  DLAETVRQVEALGRRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALA-SEGTRL 134

Query: 108 LDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQK-GCILFTASACTEIAGL----GSPA 162
                     +I+VN  G ++ A+ A   ++  ++ G I+FT+S    I GL        
Sbjct: 135 NRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSS----IGGLRGAENIGN 190

Query: 163 YTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGM----SMKGGVDPAL-------I 211
           Y  SK+G+ GL++ +A ELG   IRVN V P  +AT M           P L        
Sbjct: 191 YIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDF 250

Query: 212 ESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSV 259
           + +  QM  L   +++   I+NA L+L SD++ Y++G +L VDGG  +
Sbjct: 251 QVASRQMHVLPIPYVEPADISNAILFLVSDDARYITGVSLPVDGGALL 298

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score =  226 bits (578), Expect = 7e-74
 Identities = 73/266 (27%), Positives = 117/266 (43%), Gaps = 16/266 (6%)

Query: 11  KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL------GQDVC 64
            R   K  IITG ++GIG     LF + GA V I     +  E+    +       + V 
Sbjct: 2   PRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVN 61

Query: 65  YIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGIL--DRSFGSILDTPKSDLERLINVN 122
            +  D++ ED    ++++ + +FGK+D++ NNAG    D    +  D       + + +N
Sbjct: 62  SVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLN 121

Query: 123 TIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGL-GSPAYTISKYGILGLVKCLAAEL 181
                   K     +V   KG I+  +S             Y I+K  +    +  A +L
Sbjct: 122 LQAVIEMTKKVKPHLV-ASKGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDL 180

Query: 182 GQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLK-----GEFLKTDGIANAAL 236
            ++GIRVN VSP  + TG +   G+     +   + M + K     G   K + IAN  L
Sbjct: 181 AKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIIL 240

Query: 237 YLASDE-SSYVSGQNLVVDGGFSVVN 261
           +LA    S Y+ GQ++V DGG S+V 
Sbjct: 241 FLADRNLSFYILGQSIVADGGTSLVM 266

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score =  224 bits (573), Expect = 1e-73
 Identities = 66/254 (25%), Positives = 111/254 (43%), Gaps = 21/254 (8%)

Query: 13  LEGKVAIITGGASGIGAMAVELFHENGAKVVIA-DVQDKLGEDLADKLGQDVCYIHCDIS 71
                 ++TGG+ GIG   VEL  +N    VI  D+Q     +          +I  D++
Sbjct: 2   NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAENLK-------FIKADLT 54

Query: 72  NEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAK 131
            + ++ N++D    K    D ++ NAGIL    GSI D     +++++++N        K
Sbjct: 55  KQQDITNVLDII--KNVSFDGIFLNAGIL--IKGSIFDIDIESIKKVLDLNVWSSIYFIK 110

Query: 132 HAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCV 191
                +  +    I+F  S    IA   S AYT+SK  I  + K LA +L +Y IRVN V
Sbjct: 111 GLENNL--KVGASIVFNGSDQCFIAKPNSFAYTLSKGAIAQMTKSLALDLAKYQIRVNTV 168

Query: 192 SPYGLATGM-----SMKGGVDPALIESSMSQMGNLK--GEFLKTDGIANAALYLASDESS 244
            P  + T +                + +  Q           +   IA   ++L SD+S 
Sbjct: 169 CPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAELVIFLLSDKSK 228

Query: 245 YVSGQNLVVDGGFS 258
           +++G  + +DGG++
Sbjct: 229 FMTGGLIPIDGGYT 242

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score =  224 bits (574), Expect = 2e-73
 Identities = 76/254 (29%), Positives = 115/254 (45%), Gaps = 17/254 (6%)

Query: 11  KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADV-QDKLGEDLADKLGQDVCYIHCD 69
           +  EGKVA++TG A GIG   V      GA+V +AD     +  DL          +  D
Sbjct: 24  QGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAADLH---------LPGD 74

Query: 70  ISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLG 129
           +        L     +  G+LDI+ NNAG++  S G I +T  +D    + VN    F  
Sbjct: 75  LREAAYADGLPGAVAAGLGRLDIVVNNAGVI--SRGRITETTDADWSLSLGVNVEAPFRI 132

Query: 130 AKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVN 189
            + A  +M     G I+  AS      G G   Y ++K  +  L +C+  +    GIR+N
Sbjct: 133 CRAAIPLMAAAGGGAIVNVASCWGLRPGPGHALYCLTKAALASLTQCMGMDHAPQGIRIN 192

Query: 190 CVSPYGLATGM----SMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSY 245
            V P  + T M      K G DP    + + +   L G   + + IA+  L+LASD + Y
Sbjct: 193 AVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVPL-GRIAEPEDIADVVLFLASDAARY 251

Query: 246 VSGQNLVVDGGFSV 259
           + G  + V+GG +V
Sbjct: 252 LCGSLVEVNGGKAV 265

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score =  224 bits (573), Expect = 2e-73
 Identities = 64/261 (24%), Positives = 114/261 (43%), Gaps = 24/261 (9%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHC 68
            L  KV +I+G    +G        E GA +V+A    +  ED+A ++   G+    +  
Sbjct: 8   LLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGT 67

Query: 69  DISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFL 128
           DI+++ +V +LVD  +  +G++D++ NNA  +        +T    +   I +   G   
Sbjct: 68  DITDDAQVAHLVDETMKAYGRVDVVINNAFRVPS-MKPFANTTFEHMRDAIELTVFGALR 126

Query: 129 GAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRV 188
             +     +  + KG ++   S     +     AY ++K  +L + + LA ELG+ GIRV
Sbjct: 127 LIQGFTPALE-ESKGAVVNVNSMVVRHSQAKYGAYKMAKSALLAMSQTLATELGEKGIRV 185

Query: 189 NCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKT-------------DGIANAA 235
           N V P  +  G         +  E    + G    +                 D +A+A 
Sbjct: 186 NSVLPGYIWGGTL------KSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTEDEVASAI 239

Query: 236 LYLASDESSYVSGQNLVVDGG 256
           L++ASD +S ++GQ L V+ G
Sbjct: 240 LFMASDLASGITGQALDVNCG 260

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score =  223 bits (570), Expect = 9e-73
 Identities = 67/265 (25%), Positives = 114/265 (43%), Gaps = 9/265 (3%)

Query: 1   MNGPSSAAPFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL- 59
           M   ++   +  L+G  A++TGG+ GIG   VE     GA+V      +K  ++  +   
Sbjct: 8   MMNCNNEGRW-SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWR 66

Query: 60  --GQDVCYIHCDISNEDEVINLVDTAVSKF-GKLDIMYNNAGILDRSFGSILDTPKSDLE 116
             G +V    CD+ +  E   L+ T    F GKL+I+ NNAG++        D  + D  
Sbjct: 67  EKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIH--KEAKDFTEKDYN 124

Query: 117 RLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKC 176
            ++  N    +  ++ A  ++   Q G ++F +S     A      Y+ SK  I  + K 
Sbjct: 125 IIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKS 184

Query: 177 LAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLK--GEFLKTDGIANA 234
           LA E  +  IRVN V+P  + T +           +  +         G   K   ++  
Sbjct: 185 LACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSAL 244

Query: 235 ALYLASDESSYVSGQNLVVDGGFSV 259
             +L    +SY++GQ +  DGGF+ 
Sbjct: 245 IAFLCFPAASYITGQIIWADGGFTA 269

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score =  221 bits (566), Expect = 2e-72
 Identities = 70/250 (28%), Positives = 114/250 (45%), Gaps = 7/250 (2%)

Query: 11  KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDI 70
              +GK AI+ GG  G+G   V    E GA+V++    +     + ++ G  V  +  DI
Sbjct: 4   GNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDI 63

Query: 71  SNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGA 130
           ++ +E+  L   A    G +D+++ NAG+            ++  +R   VNT G F   
Sbjct: 64  ADLNEIAVLGAAAGQTLGAIDLLHINAGVS--ELEPFDQVSEASYDRQFAVNTKGAFFTV 121

Query: 131 KHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNC 190
           +    ++  ++ G I+FT+S   E    G   Y+ SK  ++     LAAEL   GIRVN 
Sbjct: 122 QRLTPLI--REGGSIVFTSSVADEGGHPGMSVYSASKAALVSFASVLAAELLPRGIRVNS 179

Query: 191 VSPYGLATGMSMKGGVDPALIESSMSQMGNL--KGEFLKTDGIANAALYLASDESSYVSG 248
           VSP  + T      G+  A      +   N+         D +A A L+LA + +++ +G
Sbjct: 180 VSPGFIDTPTKGVAGITEAERAEFKTLGDNITPMKRNGTADEVARAVLFLAFE-ATFTTG 238

Query: 249 QNLVVDGGFS 258
             L VDGG  
Sbjct: 239 AKLAVDGGLG 248

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score =  220 bits (563), Expect = 6e-72
 Identities = 87/257 (33%), Positives = 134/257 (52%), Gaps = 13/257 (5%)

Query: 10  FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLG-EDLAD---KLGQDVCY 65
           +K LEGKV +ITG ++G+G      F    AKVV+     +     + +   K+G +   
Sbjct: 2   YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIA 61

Query: 66  IHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIG 125
           +  D++ E +VINLV +A+ +FGKLD+M NNAG+   +  S  +   SD  ++I+ N  G
Sbjct: 62  VKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLE--NPVSSHEMSLSDWNKVIDTNLTG 119

Query: 126 GFLGAKHAARVMVPQ-QKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQY 184
            FLG++ A +  V    KG ++  +S   +I       Y  SK G+  + + LA E    
Sbjct: 120 AFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPK 179

Query: 185 GIRVNCVSPYGLATGMSMKGGVDPALIESSMSQ--MGNLKGEFLKTDGIANAALYLASDE 242
           GIRVN + P  + T ++ +   DP       S   MG + GE    + IA  A +LAS E
Sbjct: 180 GIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYI-GE---PEEIAAVAAWLASSE 235

Query: 243 SSYVSGQNLVVDGGFSV 259
           +SYV+G  L  DGG ++
Sbjct: 236 ASYVTGITLFADGGMTL 252

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score =  219 bits (561), Expect = 2e-71
 Identities = 64/254 (25%), Positives = 107/254 (42%), Gaps = 14/254 (5%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGE---DLADKLGQDVCYIHC 68
            L+GKVA +TG + GIG    E + + GA V I        E    L    G       C
Sbjct: 31  SLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKC 90

Query: 69  DISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFL 128
           +IS+   V   +      FG +D+   NAG+       I         ++I+V+  G + 
Sbjct: 91  NISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYY 150

Query: 129 GAKHAARVMVPQQKGCILFTASACTEIAGLGSP--AYTISKYGILGLVKCLAAELGQYGI 186
            + +  ++     KG ++ T+S   +I  +      Y  +K     L K LA E   +  
Sbjct: 151 CSHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQAPYNTAKAACTHLAKSLAIEWAPFA- 209

Query: 187 RVNCVSPYGLATGMSMKGGVDPALIESSMSQ--MGNLKGEFLKTDGIANAALYLASDESS 244
           RVN +SP  + T ++        +         +G   G    T  +    LYLAS+ S+
Sbjct: 210 RVNTISPGYIDTDIT--DFASKDMKAKWWQLTPLGRE-GL---TQELVGGYLYLASNAST 263

Query: 245 YVSGQNLVVDGGFS 258
           + +G ++V+DGG++
Sbjct: 264 FTTGSDVVIDGGYT 277

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score =  218 bits (558), Expect = 7e-71
 Identities = 79/285 (27%), Positives = 124/285 (43%), Gaps = 40/285 (14%)

Query: 3   GPSSAAPFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLG---------E 53
           G    +    L GKVA ITG A G G         +GA ++  D+ D++          E
Sbjct: 1   GSMPRSSEGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPE 60

Query: 54  DLAD------KLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSI 107
           +LA        +G  +     D+ + + +   +   + + G+LDI+  NAGI      + 
Sbjct: 61  ELAATVKLVEDIGSRIVARQADVRDRESLSAALQAGLDELGRLDIVVANAGI------AP 114

Query: 108 LDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQK-GCILFTASACTEIAGL-------- 158
           +         +I+VN  G +   K A   +V Q   G I+  +S     AGL        
Sbjct: 115 MSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISS----SAGLAGVGSADP 170

Query: 159 GSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIES----- 213
           GS  Y  +K+G++GL++  A  L    IRVN + P G+ T M         L +      
Sbjct: 171 GSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATD 230

Query: 214 SMSQMGN-LKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGF 257
           +   MGN +  E L  + +ANA  +L SD++ Y++G  L VD GF
Sbjct: 231 TPGAMGNAMPVEVLAPEDVANAVAWLVSDQARYITGVTLPVDAGF 275

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score =  218 bits (558), Expect = 7e-71
 Identities = 86/255 (33%), Positives = 130/255 (50%), Gaps = 17/255 (6%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLAD---KLGQDVCYIHC 68
            L GK A+ITG ++GIG      + E GA+V +A       + +AD    +G     I C
Sbjct: 29  DLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRC 88

Query: 69  DISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFL 128
           D++  D+V  ++D    + G +DI   NAGI+     ++LD P  + +R+ + N  G FL
Sbjct: 89  DVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSV--QAMLDMPLEEFQRIQDTNVTGVFL 146

Query: 129 GAKHAARVMVPQQK-GCILFTASACTEIAGLGSP--AYTISKYGILGLVKCLAAELGQYG 185
            A+ AAR MV Q   G I+ TAS    I  +      Y  SK  ++ L K +A EL  + 
Sbjct: 147 TAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSKAAVVHLTKAMAVELAPHQ 206

Query: 186 IRVNCVSPYGLATGMSMKGGVDPALIESS--MSQMGNLKGEFLKTDGIANAALYLASDES 243
           IRVN VSP  + T +        AL E    + +MG       + + +    LYLAS  S
Sbjct: 207 IRVNSVSPGYIRTELVEPLADYHALWEPKIPLGRMG-------RPEELTGLYLYLASAAS 259

Query: 244 SYVSGQNLVVDGGFS 258
           SY++G ++V+DGG++
Sbjct: 260 SYMTGSDIVIDGGYT 274

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score =  217 bits (555), Expect = 8e-71
 Identities = 77/254 (30%), Positives = 121/254 (47%), Gaps = 14/254 (5%)

Query: 12  RLEGKVAIITGGASGIG-AMAVELFHENGAKVVIADVQDKLGEDLADKL-GQDVCYIHCD 69
           RL+G  A +TG  SGIG  +       +GA++++ D +    +  A +L       I  D
Sbjct: 8   RLDGACAAVTGAGSGIGLEICRAF-AASGARLILIDREAAALDRAAQELGAAVAARIVAD 66

Query: 70  ISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLG 129
           +++ + +             + I+ N+AGI        L+T  +   +++ VN  G F  
Sbjct: 67  VTDAEAMTAAAA-EAEAVAPVSILVNSAGIARL--HDALETDDATWRQVMAVNVDGMFWA 123

Query: 130 AKHAARVMVPQQKGCILFTASACTEIAGLGS--PAYTISKYGILGLVKCLAAELGQYGIR 187
           ++   R MV +  G I+   S    I        +Y  SK  +  L + LAAE    G+R
Sbjct: 124 SRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSYMASKGAVHQLTRALAAEWAGRGVR 183

Query: 188 VNCVSPYGLATGMSMKGGVDPALIESSMSQ--MGNLKGEFLKTDGIANAALYLASDESSY 245
           VN ++P  +AT M++K    P L E+ +    MG   GE      IA AAL+LAS  +SY
Sbjct: 184 VNALAPGYVATEMTLKMRERPELFETWLDMTPMGRC-GE---PSEIAAAALFLASPAASY 239

Query: 246 VSGQNLVVDGGFSV 259
           V+G  L VDGG++V
Sbjct: 240 VTGAILAVDGGYTV 253

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score =  217 bits (555), Expect = 9e-71
 Identities = 69/255 (27%), Positives = 118/255 (46%), Gaps = 16/255 (6%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHC 68
           R E KV I+TG   GIG    E     GA VV+AD+  +  E +A ++   G     +  
Sbjct: 6   RFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAV 65

Query: 69  DISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRS-FGSILDTPKSDLERLINVNTIGGF 127
           D+S+ +    + D  +++FG +D + NNA I        +L       ++ ++VN  G  
Sbjct: 66  DVSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGAL 125

Query: 128 LGAKHAARVMVPQQKGCILFTASACTEIAGL-GSPAYTISKYGILGLVKCLAAELGQYGI 186
              +   + M  +  G I+  +S     A    S  Y ++K GI GL + L+ ELG   I
Sbjct: 126 WCTRAVYKKMTKRGGGAIVNQSS----TAAWLYSNYYGLAKVGINGLTQQLSRELGGRNI 181

Query: 187 RVNCVSPYGLATGMSMKGGVDPALIESSMSQ--MGNLKGEFLKTDGIANAALYLASDESS 244
           R+N ++P  + T    +      +++  +    +  + G     D +    L+L SDE+S
Sbjct: 182 RINAIAPGPIDTEA-NRTTTPKEMVDDIVKGLPLSRM-GT---PDDLVGMCLFLLSDEAS 236

Query: 245 YVSGQNLVVDGGFSV 259
           +++GQ   VDGG  +
Sbjct: 237 WITGQIFNVDGGQII 251

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score =  217 bits (556), Expect = 2e-70
 Identities = 70/294 (23%), Positives = 109/294 (37%), Gaps = 46/294 (15%)

Query: 3   GPSSAAPFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLG---------E 53
           GP S     R++ KV ++TGGA G G        E GA +++ D+   +           
Sbjct: 1   GPGSM---GRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSR 57

Query: 54  DLAD------KLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSI 107
           DL +      K G+       D+ +   V   +  AV++FGKLD++  NAGI        
Sbjct: 58  DLEEAGLEVEKTGRKAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGIC----PLG 113

Query: 108 LDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTAS-----------ACTEIA 156
              P        +V+ +G       A   +       I+ T S                 
Sbjct: 114 AHLPVQAFADAFDVDFVGVINTVHAALPYLTSG--ASIITTGSVAGLIAAAQPPGAGGPQ 171

Query: 157 GLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALI----- 211
           G G   Y+ +K  +      LAA+L    IR N + P  + T M     +          
Sbjct: 172 GPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEA 231

Query: 212 ------ESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSV 259
                   +   M  +   +++   I+NA  +LASDES YV+G    VD G  +
Sbjct: 232 PSRADALLAFPAMQAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAML 285

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score =  215 bits (550), Expect = 8e-70
 Identities = 67/267 (25%), Positives = 114/267 (42%), Gaps = 34/267 (12%)

Query: 11  KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL-----GQDVCY 65
             + GKVA++TG A GIG    E     GAKV + D   + G      L      Q   +
Sbjct: 3   HMVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLF 62

Query: 66  IHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIG 125
           I CD++++ ++ +     V  FG+LDI+ NNAG+            + + E+ + +N + 
Sbjct: 63  IQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGV----------NNEKNWEKTLQINLVS 112

Query: 126 GFLGAKHAARVMVPQQKG---CILFTASACTEIAGL----GSPAYTISKYGILGLVKC-- 176
              G       M  Q  G    I+  +S    +AGL      P Y  SK+GI+G  +   
Sbjct: 113 VISGTYLGLDYMSKQNGGEGGIIINMSS----LAGLMPVAQQPVYCASKHGIVGFTRSAA 168

Query: 177 LAAELGQYGIRVNCVSPYGLATGM--SMKGGVDPALIESSMSQMGNL--KGEFLKTDGIA 232
           LAA L   G+R+N + P  + T +  S++   +          + ++      L    IA
Sbjct: 169 LAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIA 228

Query: 233 NAALYLASDESSYVSGQNLVVDGGFSV 259
           N  + L  D++  ++G  + +     +
Sbjct: 229 NGLITLIEDDA--LNGAIMKITTSKGI 253

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score =  215 bits (549), Expect = 8e-70
 Identities = 86/257 (33%), Positives = 137/257 (53%), Gaps = 19/257 (7%)

Query: 11  KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDI 70
            RL GK  ++TG ASGIG  A++LF   GA +V  D +++L  +    L  +   +  D+
Sbjct: 2   GRLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADV 61

Query: 71  SNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGA 130
           S+   V  +   A+ +FG+L  + + AG+         + P    E+++ VN  G FL A
Sbjct: 62  SDPKAVEAVFAEALEEFGRLHGVAHFAGVA--HSALSWNLPLEAWEKVLRVNLTGSFLVA 119

Query: 131 KHAARVMVPQQKGCILFTASACTEIAGLGSP---AYTISKYGILGLVKCLAAELGQYGIR 187
           + A  V+  ++ G ++ T S    +AGLG+     Y   K G++GL + LA EL + G+R
Sbjct: 120 RKAGEVL--EEGGSLVLTGS----VAGLGAFGLAHYAAGKLGVVGLARTLALELARKGVR 173

Query: 188 VNCVSPYGLATGMSMKGGVDPALIESSMSQ--MGNLKGEFLKTDGIANAALYLASDESSY 245
           VN + P  + T M+   G+ P   E  +    +G   G     + +A AAL+L S+ES+Y
Sbjct: 174 VNVLLPGLIQTPMT--AGLPPWAWEQEVGASPLGRA-GR---PEEVAQAALFLLSEESAY 227

Query: 246 VSGQNLVVDGGFSVVNP 262
           ++GQ L VDGG S+V P
Sbjct: 228 ITGQALYVDGGRSIVGP 244

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score =  214 bits (548), Expect = 1e-69
 Identities = 77/251 (30%), Positives = 123/251 (49%), Gaps = 13/251 (5%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHC 68
            L   VAI+TG A+GIG      F + GA VV+ D++ +  E +A  +   G     + C
Sbjct: 9   HLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLEC 68

Query: 69  DISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFL 128
           ++++E     ++  A+ +FGK+ ++ NNAG          D P SD E    +N    F 
Sbjct: 69  NVTDEQHREAVIKAALDQFGKITVLVNNAGG---GGPKPFDMPMSDFEWAFKLNLFSLFR 125

Query: 129 GAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRV 188
            ++ AA  M     G IL  +S   E   +   +Y  SK  +  L + +A ++G  GIRV
Sbjct: 126 LSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGSSKAAVNHLTRNIAFDVGPMGIRV 185

Query: 189 NCVSPYGLATGMSMKGGVDPALIESSMSQ--MGNLKGEFLKTDGIANAALYLASDESSYV 246
           N ++P  + T   +   + P +  + +    +G L GE      IANAAL+L S  ++++
Sbjct: 186 NAIAPGAIKTDA-LATVLTPEIERAMLKHTPLGRL-GE---AQDIANAALFLCSPAAAWI 240

Query: 247 SGQNLVVDGGF 257
           SGQ L V GG 
Sbjct: 241 SGQVLTVSGGG 251

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317

 Score =  215 bits (551), Expect = 2e-69
 Identities = 78/287 (27%), Positives = 134/287 (46%), Gaps = 31/287 (10%)

Query: 1   MNGPSSAAPFKRLEGKVAIITGGASGIG-AMAVELFHENGAKVVIADVQDKLG------- 52
           ++     A   RL+GKVA ITG A G G   AV    ++GA +V  D+  +         
Sbjct: 32  VSARGQGARMNRLQGKVAFITGAARGQGRTHAVR-LAQDGADIVAIDLCRQQPNLDYAQG 90

Query: 53  --EDLAD------KLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSF 104
             E+L +      + G+ +     D+ +   +  +VD A+++FG +DI+ +N GI   + 
Sbjct: 91  SPEELKETVRLVEEQGRRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGIS--NQ 148

Query: 105 GSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQK-GCILFTASACTEIAGLGSPAY 163
           G ++         ++  N IG +   +     M+ + + G ++F +S        G   Y
Sbjct: 149 GEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQSHY 208

Query: 164 TISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGM----SMKGGVDPAL-------IE 212
             SK+G+ GL+  LA E+G++ IRVN V+P  + T M     +     P L         
Sbjct: 209 AASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAA 268

Query: 213 SSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSV 259
              SQ+  L   +++ + ++NA  +LASDE+ Y+ G  + VDGG   
Sbjct: 269 ELFSQLTLLPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQLA 315

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score =  213 bits (544), Expect = 4e-69
 Identities = 52/257 (20%), Positives = 98/257 (38%), Gaps = 20/257 (7%)

Query: 8   APFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL----GQDV 63
                L  ++ ++TG + GIG  A   +   GA V++    ++    +A  +    G+  
Sbjct: 5   PKQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQP 64

Query: 64  CYIHCD--ISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINV 121
            +   D      +    L       + +LD + +NAG+L      + +      + ++ V
Sbjct: 65  QWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLL-GDVCPMSEQNPQVWQDVMQV 123

Query: 122 NTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAEL 181
           N    F+  +    +++    G ++FT+S+          AY  SK+   G+++ LA E 
Sbjct: 124 NVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEY 183

Query: 182 GQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASD 241
            Q  +RVNC++P G  T M        A       ++            I    L+L  D
Sbjct: 184 QQ-RLRVNCINPGGTRTAM-----RASAFPTEDPQKLK-------TPADIMPLYLWLMGD 230

Query: 242 ESSYVSGQNLVVDGGFS 258
           +S   +G       G  
Sbjct: 231 DSRRKTGMTFDAQPGRK 247

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score =  212 bits (543), Expect = 6e-69
 Identities = 72/254 (28%), Positives = 112/254 (44%), Gaps = 9/254 (3%)

Query: 12  RLEGKVAIITGGASGIG-AMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIH 67
            LEG  A++TGG+ GIG  +  EL    GA V       K   D   +    G  V    
Sbjct: 6   NLEGCTALVTGGSRGIGYGIVEEL-ASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASV 64

Query: 68  CDISNEDEVINLVDTAVSKF-GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGG 126
           CD+S+  E   L++T  + F GKL+I+ NNAGI+        D    D   ++++N    
Sbjct: 65  CDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIY--KEAKDYTVEDYSLIMSINFEAA 122

Query: 127 FLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGI 186
           +  +  A   +   ++G ++F +S    +A      Y  +K  +  L +CLA E  +  I
Sbjct: 123 YHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNI 182

Query: 187 RVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNL-KGEFLKTDGIANAALYLASDESSY 245
           RVN V P  +AT +      DP   E+    +         +   +A    +L    +SY
Sbjct: 183 RVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAASY 242

Query: 246 VSGQNLVVDGGFSV 259
           V+GQ + VDGG   
Sbjct: 243 VTGQIIYVDGGLMA 256

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score =  212 bits (543), Expect = 9e-69
 Identities = 70/264 (26%), Positives = 116/264 (43%), Gaps = 15/264 (5%)

Query: 1   MNGPSSAAPFKRLEGKVAIITGGA-SGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL 59
              P        L+GKV ++T  A +GIG+         GA VVI+D  ++   +  D+L
Sbjct: 8   SEAPKEIDGHGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQL 67

Query: 60  GQD----VCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDL 115
                  V  + CD+++ + V  L+   V K G+LD++ NNAG+       ++D    + 
Sbjct: 68  ADLGLGRVEAVVCDVTSTEAVDALITQTVEKAGRLDVLVNNAGL-GGQ-TPVVDMTDEEW 125

Query: 116 ERLINVNTIGGFLGAKHAARVMVPQQK-GCILFTASACTEIAGLGSPAYTISKYGILGLV 174
           +R++NV         + A R        G I+  AS     A      Y  +K G++ L 
Sbjct: 126 DRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAAAKAGVMALT 185

Query: 175 KCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQ--MGNLKGEFLKTDGIA 232
           +C A E  ++G+R+N VSP        ++      L++   S    G    E      +A
Sbjct: 186 RCSAIEAVEFGVRINAVSPSIARHKF-LEKTSSSELLDRLASDEAFGRA-AE---PWEVA 240

Query: 233 NAALYLASDESSYVSGQNLVVDGG 256
               +LASD SSY++G+ + V   
Sbjct: 241 ATIAFLASDYSSYMTGEVVSVSSQ 264

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score =  210 bits (538), Expect = 2e-68
 Identities = 66/249 (26%), Positives = 114/249 (45%), Gaps = 14/249 (5%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDIS 71
            L G+  ++TG   GIG   V+  H  GA+VV         + L  +    +  +  D+ 
Sbjct: 4   FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLV-RECPGIEPVCVDLG 62

Query: 72  NEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAK 131
           + +      + A+   G +D++ NNA +        L+  K   +R   VN       ++
Sbjct: 63  DWEAT----ERALGSVGPVDLLVNNAAVALL--QPFLEVTKEAFDRSFEVNLRAVIQVSQ 116

Query: 132 HAARVMVPQ-QKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNC 190
             AR ++ +   G I+  +S C++ A      Y  +K  +  L K +A ELG + IRVN 
Sbjct: 117 IVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNA 176

Query: 191 VSPYGLATGMSMKGGVDPALIESSMSQ--MGNLKGEFLKTDGIANAALYLASDESSYVSG 248
           V+P  + T M      DP   ++ +++  +    G+F + + + NA L+L SD S   +G
Sbjct: 177 VNPTVVMTSMGQATWSDPHKAKTMLNRIPL----GKFAEVEHVVNAILFLLSDRSGMTTG 232

Query: 249 QNLVVDGGF 257
             L V+GGF
Sbjct: 233 STLPVEGGF 241

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score =  210 bits (538), Expect = 3e-68
 Identities = 67/251 (26%), Positives = 113/251 (45%), Gaps = 14/251 (5%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDIS 71
              G  A++TG   GIG   V+  H +GAKVV     +     LA +    +  +  D+ 
Sbjct: 4   NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECP-GIEPVCVDLG 62

Query: 72  NEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAK 131
           + D      + A+   G +D++ NNA ++       L+  K   +R  +VN    F  ++
Sbjct: 63  DWDAT----EKALGGIGPVDLLVNNAALVIM--QPFLEVTKEAFDRSFSVNLRSVFQVSQ 116

Query: 132 HAARVMVPQ-QKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNC 190
             AR M+ +   G I+  +S    +       Y+ +K  +  L K +A ELG + IRVN 
Sbjct: 117 MVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNS 176

Query: 191 VSPYGLATGMSMKGGVDPALIESSMSQ--MGNLKGEFLKTDGIANAALYLASDESSYVSG 248
           V+P  + T M  K   DP        +  +     +F + + + N+ L+L SD S+  SG
Sbjct: 177 VNPTVVLTDMGKKVSADPEFARKLKERHPL----RKFAEVEDVVNSILFLLSDRSASTSG 232

Query: 249 QNLVVDGGFSV 259
             ++VD G+  
Sbjct: 233 GGILVDAGYLA 243

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score =  210 bits (537), Expect = 6e-68
 Identities = 70/267 (26%), Positives = 114/267 (42%), Gaps = 22/267 (8%)

Query: 5   SSAAPFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVC 64
           S  A    L G+ AI+TGG+ GIGA       + GA V IAD+     + +   L     
Sbjct: 2   SHMAGIFDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGF 61

Query: 65  YIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTI 124
            +  D++    V   +  A+   G  D++  NAG+        +D    + +   +VN  
Sbjct: 62  AVEVDVTKRASVDAAMQKAIDALGGFDLLCANAGVST--MRPAVDITDEEWDFNFDVNAR 119

Query: 125 GGFLGAKHAARVMVPQQK-GCILFTASACTEIAGL----GSPAYTISKYGILGLVKCLAA 179
           G FL  + A R  +     G I+ TAS    +A          Y+ SK+ + G  + LA 
Sbjct: 120 GVFLANQIACRHFLASNTKGVIVNTAS----LAAKVGAPLLAHYSASKFAVFGWTQALAR 175

Query: 180 ELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKT---------DG 230
           E+    IRVNCV P  + T M  +        E        ++ E++           + 
Sbjct: 176 EMAPKNIRVNCVCPGFVKTAMQER--EIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPED 233

Query: 231 IANAALYLASDESSYVSGQNLVVDGGF 257
           +A+  ++LASD + +++GQ + V GG 
Sbjct: 234 VADVVVFLASDAARFMTGQGINVTGGV 260

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score =  209 bits (535), Expect = 9e-68
 Identities = 75/254 (29%), Positives = 116/254 (45%), Gaps = 17/254 (6%)

Query: 11  KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQD-KLGEDLADKLGQDVCYIHCD 69
           +RL+ K+A+ITGGA+GIG    E F   GA + IAD+      E     LG+ V  + CD
Sbjct: 3   QRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCD 62

Query: 70  ISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLG 129
           +S   +V       +S FG+ DI+ NNAGI         +      ++   +N   GFL 
Sbjct: 63  VSQPGDVEAFGKQVISTFGRCDILVNNAGIY--PLIPFDELTFEQWKKTFEINVDSGFLM 120

Query: 130 AKHAARVMVPQQKGCILFTASACTEIAGL----GSPAYTISKYGILGLVKCLAAELGQYG 185
           AK     M     G I+   S                Y  +K   +G  + LA++LG+ G
Sbjct: 121 AKAFVPGMKRNGWGRIINLTS----TTYWLKIEAYTHYISTKAANIGFTRALASDLGKDG 176

Query: 186 IRVNCVSPYGLATGM--SMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDES 243
           I VN ++P  + T    +        ++ + +  +  L         +  AA +LASD++
Sbjct: 177 ITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRL-QV---PLDLTGAAAFLASDDA 232

Query: 244 SYVSGQNLVVDGGF 257
           S+++GQ L VDGG 
Sbjct: 233 SFITGQTLAVDGGM 246

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score =  208 bits (531), Expect = 4e-67
 Identities = 71/253 (28%), Positives = 121/253 (47%), Gaps = 14/253 (5%)

Query: 12  RLEGKVAIITGGASGIG-AMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIH 67
            L GK A++TG A G+G A A  L    GA+V++ D++  L  +  D L   G D   + 
Sbjct: 6   DLTGKTALVTGSARGLGFAYAEGL-AAAGARVILNDIRATLLAESVDTLTRKGYDAHGVA 64

Query: 68  CDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGF 127
            D+++E  +        ++   +DI+ NNAGI  R    +++    + +++I+ N    F
Sbjct: 65  FDVTDELAIEAAFSKLDAEGIHVDILINNAGIQYR--KPMVELELENWQKVIDTNLTSAF 122

Query: 128 LGAKHAARVMVPQQK-GCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGI 186
           L ++ AA+ M+ +   G I+   S  ++ A      YT +K GI  L   +AAE  Q+ I
Sbjct: 123 LVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMAAEWAQFNI 182

Query: 187 RVNCVSPYGLATGMSMKGGVDPALIESSMSQ--MGNLKGEFLKTDGIANAALYLASDESS 244
           + N + P  + T M+     D        S        G     + +   A++L+S  S 
Sbjct: 183 QTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQRW-GR---PEELIGTAIFLSSKASD 238

Query: 245 YVSGQNLVVDGGF 257
           Y++GQ + VDGG+
Sbjct: 239 YINGQIIYVDGGW 251

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score =  207 bits (530), Expect = 7e-67
 Identities = 57/260 (21%), Positives = 93/260 (35%), Gaps = 15/260 (5%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL-----GQDVCYI 66
            L   VA++TGG+SGIG   VEL  E GA V       +        L     G  +   
Sbjct: 5   DLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFAS 64

Query: 67  HCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGG 126
            CD+ +  +V    +      G   I+ NNAG       +  +T        + +     
Sbjct: 65  VCDVLDALQVRAFAEACERTLGCASILVNNAGQ--GRVSTFAETTDEAWSEELQLKFFSV 122

Query: 127 FLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGI 186
               +     +  +    I+   S           A + ++ G+  LV+ +A E    G+
Sbjct: 123 IHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATSAARAGVKNLVRSMAFEFAPKGV 182

Query: 187 RVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKT--------DGIANAALYL 238
           RVN +    + +G   +        E   +Q         +            A A L+L
Sbjct: 183 RVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIEAARAILFL 242

Query: 239 ASDESSYVSGQNLVVDGGFS 258
           AS  S+Y +G ++ V GG S
Sbjct: 243 ASPLSAYTTGSHIDVSGGLS 262

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score =  206 bits (526), Expect = 4e-66
 Identities = 68/257 (26%), Positives = 119/257 (46%), Gaps = 10/257 (3%)

Query: 4   PSSAAPFKRLEGKVAIITGGASGIG-AMAVELFHENGAKVVIADVQDKLGEDLAD--KLG 60
            S   PF  L G+ A++TG  SGIG A+A       GA V+     D + E   +    G
Sbjct: 21  QSMTGPF-SLAGRTAVVTGAGSGIGRAIAHGY-ARAGAHVLAWGRTDGVKEVADEIADGG 78

Query: 61  QDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLIN 120
                +  D+++ +   N+ +  ++   ++D++ NNAGI+ R      +        ++ 
Sbjct: 79  GSAEAVVADLADLEGAANVAE-ELAATRRVDVLVNNAGIIAR--APAEEVSLGRWREVLT 135

Query: 121 VNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAE 180
           VN    ++ ++     M+    G I+  AS  +   G    AY  SK+ ++GL + LA+E
Sbjct: 136 VNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAASKHAVVGLTRALASE 195

Query: 181 LGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLAS 240
               G+ VN ++P  + T  +     D        +++    G +   + +   A++LAS
Sbjct: 196 WAGRGVGVNALAPGYVVTANTAALRADDERAAEITARI--PAGRWATPEDMVGPAVFLAS 253

Query: 241 DESSYVSGQNLVVDGGF 257
           D +SYV GQ L VDGG+
Sbjct: 254 DAASYVHGQVLAVDGGW 270

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score =  205 bits (525), Expect = 5e-66
 Identities = 62/245 (25%), Positives = 107/245 (43%), Gaps = 13/245 (5%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDIS 71
           +   K+AI+TG  SG+G          G  V +A  +    ++ A ++G D   +  D++
Sbjct: 25  KTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVT 84

Query: 72  NEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAK 131
           + D V  L    V KFG++D+++NNAG        + D   +  +++++ N  G FL  +
Sbjct: 85  DPDSVRALFTATVEKFGRVDVLFNNAGT-GAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQ 143

Query: 132 HAARVMVPQQK--GCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVN 189
            A RVM  Q+   G I+   S         S  YT +K+ I GL K  + +   + I   
Sbjct: 144 EAFRVMKAQEPRGGRIINNGSISATSPRPYSAPYTATKHAITGLTKSTSLDGRVHDIACG 203

Query: 190 CVSPYGLATGMS--MKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASD-ESSYV 246
            +      T M+  MK GV  A +   +  +            +A+A +Y+AS    + V
Sbjct: 204 QIDIGNADTPMAQKMKAGVPQADLSIKVEPVM-------DVAHVASAVVYMASLPLDANV 256

Query: 247 SGQNL 251
               +
Sbjct: 257 QFMTI 261

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score =  205 bits (523), Expect = 6e-66
 Identities = 61/253 (24%), Positives = 112/253 (44%), Gaps = 24/253 (9%)

Query: 8   APFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQD----- 62
           A  + L+G+V ++TG A GIGA A   +  +GA VV+    +    +++D++        
Sbjct: 7   AHPELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQP 66

Query: 63  -VCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINV 121
            +  ++ + +   +   L      +FG+LD + +NA I+      +   P  D  ++++V
Sbjct: 67  LIIALNLENATAQQYRELAARVEHEFGRLDGLLHNASII-GPRTPLEQLPDEDFMQVMHV 125

Query: 122 NTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAEL 181
           N    F+  +    ++   +   I FT+S+          AY +SK+   GL++ LA EL
Sbjct: 126 NVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRANWGAYGVSKFATEGLMQTLADEL 185

Query: 182 -GQYGIRVNCVSPYGLATGMSMKG--GVDPALIESSMSQMGNLKGEFLKTDGIANAALYL 238
            G   +R N ++P    TGM  +     +P           N        + I    LYL
Sbjct: 186 EGVTAVRANSINPGATRTGMRAQAYPDENPL----------NNPA----PEDIMPVYLYL 231

Query: 239 ASDESSYVSGQNL 251
              +S+ ++GQ L
Sbjct: 232 MGPDSTGINGQAL 244

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281

 Score =  205 bits (525), Expect = 7e-66
 Identities = 78/280 (27%), Positives = 123/280 (43%), Gaps = 38/280 (13%)

Query: 11  KRLEGKVAIITGGASGIG-AMAVELFHENGAKVVIADVQDKLG---------EDLAD--- 57
              EGK A+ITGGA G+G + AV L  E GA + I D  +            +DLA+   
Sbjct: 6   ADFEGKTALITGGARGMGRSHAVAL-AEAGADIAICDRCENSDVVGYPLATADDLAETVA 64

Query: 58  ---KLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSD 114
              K G+       D+ +   + + V  A    G +DI   NAGI   +   + +   + 
Sbjct: 65  LVEKTGRRCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGIS--TIALLPEVESAQ 122

Query: 115 LERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGL----GSPAYTISKYGI 170
            + +I  N  G F      A  M+ +  G I+  +S    + G        +Y  SK+G+
Sbjct: 123 WDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSS----MLGHSANFAQASYVSSKWGV 178

Query: 171 LGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPAL-----------IESSMSQMG 219
           +GL KC A +L  YGI VN V+P  + T M+    V   +           +ES  + + 
Sbjct: 179 IGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLH 238

Query: 220 NLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSV 259
                FLK + +  A L+L  + SS+++G  L +D G + 
Sbjct: 239 LQYAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGATA 278

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score =  204 bits (522), Expect = 1e-65
 Identities = 65/262 (24%), Positives = 105/262 (40%), Gaps = 22/262 (8%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLG----EDLADKLGQDVCYIH 67
               K  I+TGG  GIG          GA V +            E +  + G       
Sbjct: 11  SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQ 70

Query: 68  CDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGF 127
           CD+SN D V   +    +  G +  +  NAG+         +    D   + +VN  G F
Sbjct: 71  CDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVV--KPATELTHEDFAFVYDVNVFGVF 128

Query: 128 LGAKHAARVMVPQQK-GCILFTASACTEIA-------GLGSPAYTISKYGILGLVKCLAA 179
              +  A++ + +Q+ G I+ T+S  ++I         L    Y  SK     LVK LAA
Sbjct: 129 NTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAA 188

Query: 180 ELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQ--MGNLKGEFLKTDGIANAALY 237
           E    GIRVN +SP  + T  +    +D  + +   S   +     +    + +   A+ 
Sbjct: 189 EWASAGIRVNALSPGYVNTDQT--AHMDKKIRDHQASNIPLNRF-AQ---PEEMTGQAIL 242

Query: 238 LASDESSYVSGQNLVVDGGFSV 259
           L SD ++Y++G    +DGG  +
Sbjct: 243 LLSDHATYMTGGEYFIDGGQLI 264

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score =  204 bits (522), Expect = 1e-65
 Identities = 73/265 (27%), Positives = 117/265 (44%), Gaps = 14/265 (5%)

Query: 1   MNGPSSAAPFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL- 59
           M G   +  +  L+ K  ++TGG  GIG   VE F   GA +      +    +   K  
Sbjct: 1   MAGAEQSQRW-SLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQ 59

Query: 60  --GQDVCYIHCDISNEDEVINLVDTAVSKFG-KLDIMYNNAGILDRSFGSILDTPKSDLE 116
             G  V    CD S   E   L+ T  S FG KLDI+ NN G +       LD    D  
Sbjct: 60  KKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRS--KPTLDYTAEDFS 117

Query: 117 RLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKC 176
             I+ N    +  ++ A  ++     G I+F +S    ++      Y+ +K  +  L + 
Sbjct: 118 FHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARN 177

Query: 177 LAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQ--MGNLKGEFLKTDGIANA 234
           LA E    GIR N V+P  +AT ++ +   D    +  +S+  +G   GE    + +++ 
Sbjct: 178 LACEWASDGIRANAVAPAVIATPLA-EAVYDDEFKKVVISRKPLGRF-GE---PEEVSSL 232

Query: 235 ALYLASDESSYVSGQNLVVDGGFSV 259
             +L    +SY++GQ + VDGG +V
Sbjct: 233 VAFLCMPAASYITGQTICVDGGLTV 257

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score =  204 bits (521), Expect = 2e-65
 Identities = 83/253 (32%), Positives = 129/253 (50%), Gaps = 11/253 (4%)

Query: 12  RLEGKVAIITGGASGIG-AMAVELFHENGAKVVIADV-QDKLGE---DLADKLGQDVCYI 66
            L G+VA++TGG+ G+G  +A  L  E G  VV+A    ++  E    L +K G +    
Sbjct: 18  DLRGRVALVTGGSRGLGFGIAQGL-AEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAF 76

Query: 67  HCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGG 126
            CD+SN +EV  L++    KFGKLD + N AGI  R      + P  +  ++I VN  G 
Sbjct: 77  RCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRR--HPAEEFPLDEFRQVIEVNLFGT 134

Query: 127 FLGAKHAARVMVPQQKGCILFTASACTEIAGL-GSPAYTISKYGILGLVKCLAAELGQYG 185
           +   + A  ++       I+   S   E   +    AY  SK G+  L K LA E G+YG
Sbjct: 135 YYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYG 194

Query: 186 IRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSY 245
           IRVN ++P    T M+     DP  ++  + ++    G     + +   A++LAS+E+ Y
Sbjct: 195 IRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRI--PLGRTGVPEDLKGVAVFLASEEAKY 252

Query: 246 VSGQNLVVDGGFS 258
           V+GQ + VDGG++
Sbjct: 253 VTGQIIFVDGGWT 265

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score =  203 bits (519), Expect = 2e-65
 Identities = 70/255 (27%), Positives = 102/255 (40%), Gaps = 23/255 (9%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDIS 71
              GK   +TG   GIG      F E GAKV   D           +          D++
Sbjct: 4   DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQA-------FTQEQYPFATEVMDVA 56

Query: 72  NEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAK 131
           +  +V  +    +++  +LD + N AGIL    G+     K D ++   VN  G F   +
Sbjct: 57  DAAQVAQVCQRLLAETERLDALVNAAGIL--RMGATDQLSKEDWQQTFAVNVGGAFNLFQ 114

Query: 132 HAARVMVPQQKGCILFTASACTEIAGL----GSPAYTISKYGILGLVKCLAAELGQYGIR 187
                   Q+ G I+  AS     A      G  AY  SK  +  L   +  EL   G+R
Sbjct: 115 QTMNQFRRQRGGAIVTVAS----DAAHTPRIGMSAYGASKAALKSLALSVGLELAGSGVR 170

Query: 188 VNCVSPYGLATGM----SMKGGVDPALIESSMSQMGNL--KGEFLKTDGIANAALYLASD 241
            N VSP    T M     +    +   I     Q       G+  +   IAN  L+LASD
Sbjct: 171 CNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTILFLASD 230

Query: 242 ESSYVSGQNLVVDGG 256
            +S+++ Q++VVDGG
Sbjct: 231 LASHITLQDIVVDGG 245

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score =  203 bits (519), Expect = 4e-65
 Identities = 71/262 (27%), Positives = 113/262 (43%), Gaps = 28/262 (10%)

Query: 12  RLEGKVAIITG--GASGIGAMAVELFHENGAKVVIADVQ-----DKLGEDLADKLGQDVC 64
            L+GKV ++TG  G  G+G  A     E GA V I         ++  ++L    G    
Sbjct: 17  SLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAK 76

Query: 65  YIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTI 124
              C + + +    LV   V+ FG++D    NAG        ILD        ++ V+  
Sbjct: 77  AYKCQVDSYESCEKLVKDVVADFGQIDAFIANAGATAD--SGILDGSVEAWNHVVQVDLN 134

Query: 125 GGFLGAKHAARVMVPQQKGCILFTASACTEIAGL------GSPAYTISKYGILGLVKCLA 178
           G F  AK        +  G ++ TAS    ++G          +Y ++K G + + + LA
Sbjct: 135 GTFHCAKAVGHHFKERGTGSLVITAS----MSGHIANFPQEQTSYNVAKAGCIHMARSLA 190

Query: 179 AELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQ--MGNLKGEFLKTDGIANAAL 236
            E   +  RVN +SP  + TG+S    V     +   S   MG   G       +  A +
Sbjct: 191 NEWRDF-ARVNSISPGYIDTGLS--DFVPKETQQLWHSMIPMGRD-GL---AKELKGAYV 243

Query: 237 YLASDESSYVSGQNLVVDGGFS 258
           Y ASD S+Y +G +L++DGG++
Sbjct: 244 YFASDASTYTTGADLLIDGGYT 265

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score =  202 bits (517), Expect = 4e-65
 Identities = 49/248 (19%), Positives = 93/248 (37%), Gaps = 13/248 (5%)

Query: 16  KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDE 75
            +A++T      G  AVE   ++G  VV  D       D A++   +          E +
Sbjct: 2   VIALVTHARHFAGPAAVEALTQDGYTVVCHDASF---ADAAERQRFESENPGTIALAEQK 58

Query: 76  VINLVDTAVSKFGKLDIMYNNAGIL-DRSFGSILDTPKSDLERLINVNTIGGFLGAKHAA 134
              LVD  +     +D + +N  I    +   +  T ++D+ ++    +I   L  + A 
Sbjct: 59  PERLVDATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAI 118

Query: 135 RVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPY 194
             +       ++F  S+  +     +P Y  ++   + LV+  A  L + GI +  + P 
Sbjct: 119 APLRAAGGASVIFITSSVGKKPLAYNPLYGPARAATVALVESAAKTLSRDGILLYAIGPN 178

Query: 195 GLATGM---SMKGGVDPALIESSMSQ--MGNLKGEFLKTDGIANAALYLASDESSYVSGQ 249
                    +     +P L E       +G L G     D +     +LAS  ++ + GQ
Sbjct: 179 FFNNPTYFPTSDWENNPELRERVDRDVPLGRL-GR---PDEMGALITFLASRRAAPIVGQ 234

Query: 250 NLVVDGGF 257
                GG+
Sbjct: 235 FFAFTGGY 242

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score =  202 bits (516), Expect = 7e-65
 Identities = 72/259 (27%), Positives = 115/259 (44%), Gaps = 25/259 (9%)

Query: 16  KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISN 72
           KVA++TG   GIG        ++G  V IAD  D   + +A ++   G     +  D+S+
Sbjct: 3   KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSD 62

Query: 73  EDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKH 132
            D+V   V+ A    G  D++ NNAG+       I       ++++ N+N  G   G + 
Sbjct: 63  RDQVFAAVEQARKTLGGFDVIVNNAGVAP--STPIESITPEIVDKVYNINVKGVIWGIQA 120

Query: 133 AARVMVPQ-QKGCILFTASACTEIAGL----GSPAYTISKYGILGLVKCLAAELGQYGIR 187
           A      +   G I+   S     AG         Y+ SK+ + GL +  A +L   GI 
Sbjct: 121 AVEAFKKEGHGGKIINACS----QAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGIT 176

Query: 188 VNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKT---------DGIANAALYL 238
           VN   P  + T M     +D  + E++   +G    EF K          + +A    YL
Sbjct: 177 VNGYCPGIVKTPMW--AEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYL 234

Query: 239 ASDESSYVSGQNLVVDGGF 257
           AS +S Y++GQ+L++DGG 
Sbjct: 235 ASPDSDYMTGQSLLIDGGM 253

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score =  202 bits (517), Expect = 9e-65
 Identities = 70/272 (25%), Positives = 128/272 (47%), Gaps = 17/272 (6%)

Query: 1   MNGPSSAAPFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQD-----KLGEDL 55
           ++  +    F+ +  K A+ITG  SGIG        + GA +V+           + +++
Sbjct: 11  VDLGTENLYFQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEV 70

Query: 56  ADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDL 115
           A      V +   D++   E+ +++     +FG  DI+ NNAG+  +    I D P    
Sbjct: 71  AGLSSGTVLHHPADMTKPSEIADMMAMVADRFGGADILVNNAGV--QFVEKIEDFPVEQW 128

Query: 116 ERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVK 175
           +R+I VN    F   + A   M  +  G I+  ASA   +A     AY  +K+GI+GL K
Sbjct: 129 DRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPFKSAYVAAKHGIMGLTK 188

Query: 176 CLAAELGQYGIRVNCVSP---------YGLATGMSMKGGVDPALIESSMSQMGNLKGEFL 226
            +A E+ + G+ VN + P           +      +G  +  +I   M +      +F+
Sbjct: 189 TVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKG-QPTKKFI 247

Query: 227 KTDGIANAALYLASDESSYVSGQNLVVDGGFS 258
             + +A+ ALYLA D+++ ++G ++ +DGG++
Sbjct: 248 TVEQVASLALYLAGDDAAQITGTHVSMDGGWT 279

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score =  202 bits (515), Expect = 1e-64
 Identities = 65/252 (25%), Positives = 114/252 (45%), Gaps = 23/252 (9%)

Query: 11  KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDI 70
            R + KV +ITG + GIGA  V  + +   +VV           +      D+  +  DI
Sbjct: 24  MRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSR------SIKPSADPDIHTVAGDI 77

Query: 71  SNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGA 130
           S  +    +V   + +FG++D + NNAG+        ++  + D +  + VN  G F   
Sbjct: 78  SKPETADRIVREGIERFGRIDSLVNNAGVFLA--KPFVEMTQEDYDHNLGVNVAGFFHIT 135

Query: 131 KHAARVMVPQQKGCILFTAS--ACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRV 188
           + AA  M+ Q  G I+   +      + G+ S   +++K G+  + + LA E  + G+RV
Sbjct: 136 QRAAAEMLKQGSGHIVSITTSLVDQPMVGMPSALASLTKGGLNAVTRSLAMEFSRSGVRV 195

Query: 189 NCVSPYGLATGMSMKGGVDPALIESSMSQ--MGNLKGEFLKTDGIANAALYLASDESSYV 246
           N VSP  + T M            +      +G + GE      + +A LYL  + + ++
Sbjct: 196 NAVSPGVIKTPM-----HPAETHSTLAGLHPVGRM-GE---IRDVVDAVLYL--EHAGFI 244

Query: 247 SGQNLVVDGGFS 258
           +G+ L VDGG +
Sbjct: 245 TGEILHVDGGQN 256

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score =  201 bits (514), Expect = 3e-64
 Identities = 66/260 (25%), Positives = 110/260 (42%), Gaps = 17/260 (6%)

Query: 6   SAAPFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL----GQ 61
            A      EG++A++TGG +G+G    +     G  VVI   +  + +  A ++    G 
Sbjct: 24  MAQGKGSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGN 83

Query: 62  DVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINV 121
            V  + CD+ + D+V  L     ++F +LD++ NNAG  +     + +        ++  
Sbjct: 84  IVRAVVCDVGDPDQVAALFAAVRAEFARLDLLVNNAGS-NVPPVPLEEVTFEQWNGIVAA 142

Query: 122 NTIGGFLGAKHAARVMVPQ--QKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAA 179
           N  G FL  +HA R+M  Q  + G I+   S   +     S  YT +K+ I GL K  A 
Sbjct: 143 NLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAPYTATKHAITGLTKSTAL 202

Query: 180 ELGQYGIRVNCVSPYGLATGMS--MKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALY 237
           +   + I    +     AT M+  M  GV  A  E +              + IA A +Y
Sbjct: 203 DGRMHDIACGQIDIGNAATDMTARMSTGVLQANGEVAAEPTI-------PIEHIAEAVVY 255

Query: 238 LASD-ESSYVSGQNLVVDGG 256
           +AS   S+ V    ++    
Sbjct: 256 MASLPLSANVLTMTVMATRM 275

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score =  201 bits (513), Expect = 3e-64
 Identities = 67/263 (25%), Positives = 119/263 (45%), Gaps = 14/263 (5%)

Query: 3   GPSSAAPFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQD 62
           GP S    K+ EG  AI++GGA G+G   V   H +G  VVIAD+  + G+ LAD+LG  
Sbjct: 18  GPGSMVTIKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNR 77

Query: 63  VCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLE---RLI 119
             ++  ++++ED V+  ++ A         +  + G          D   +D+    + I
Sbjct: 78  AEFVSTNVTSEDSVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTI 137

Query: 120 NVNTIGGFLGAKHAARVMVPQ------QKGCILFTASACTEIAGLGSPAYTISKYGILGL 173
           ++   G +  A+  A  +         ++G ++ TAS       +G  AY  +K G++GL
Sbjct: 138 DLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQTAYAAAKAGVIGL 197

Query: 174 VKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIAN 233
               A +L   GIRVN ++P  + T +            +  +            D  A+
Sbjct: 198 TIAAARDLSSAGIRVNTIAPGTMKTPIMESV---GEEALAKFAANIPFPKRLGTPDEFAD 254

Query: 234 AALYLASDESSYVSGQNLVVDGG 256
           AA +L ++   Y++G+ + +DG 
Sbjct: 255 AAAFLLTN--GYINGEVMRLDGA 275

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score =  202 bits (515), Expect = 4e-64
 Identities = 70/259 (27%), Positives = 109/259 (42%), Gaps = 16/259 (6%)

Query: 13  LEGKVAIITGGASGIG-AMAVELFHENGAKVVIA----DVQDKLGEDLADKLGQDVCYIH 67
            +GKVA ITGG +G+G  M   L    GA+ VIA    DV     E ++ + G  V  I 
Sbjct: 24  FQGKVAFITGGGTGLGKGMTTLLSSL-GAQCVIASRKMDVLKATAEQISSQTGNKVHAIQ 82

Query: 68  CDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGS-ILDTPKSDLERLINVNTIGG 126
           CD+ + D V N V   +   G  +I+ NNA     +F S       +  + + ++   G 
Sbjct: 83  CDVRDPDMVQNTVSELIKVAGHPNIVINNAAG---NFISPTERLSPNAWKTITDIVLNGT 139

Query: 127 FLGAKHAARVMVPQQK-GCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYG 185
                   + ++  QK    L   +   E           +K G+  + K LAAE G+YG
Sbjct: 140 AFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYG 199

Query: 186 IRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLK--GEFLKTDGIANAALYLASDES 243
           +R N + P  + T  +          E  M         G     + +AN A +L SD +
Sbjct: 200 MRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGT---VEELANLAAFLCSDYA 256

Query: 244 SYVSGQNLVVDGGFSVVNP 262
           S+++G  +  DGG  V+  
Sbjct: 257 SWINGAVIKFDGGEEVLIS 275

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score =  201 bits (514), Expect = 6e-64
 Identities = 77/269 (28%), Positives = 123/269 (45%), Gaps = 29/269 (10%)

Query: 12  RLEGKVAIITGGASGIG-AMAVELFHENGAKVVIAD--------VQDKLGEDLADKLGQD 62
            L+G+VAI+TGGA+GIG A+  E   E G+ VVIA           D+L  +L       
Sbjct: 15  LLQGQVAIVTGGATGIGKAIVKE-LLELGSNVVIASRKLERLKSAADELQANLPPTKQAR 73

Query: 63  VCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGS-ILDTPKSDLERLINV 121
           V  I C+I NE+EV NLV + +  FGK++ + NN G     F S            ++  
Sbjct: 74  VIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGG---QFLSPAEHISSKGWHAVLET 130

Query: 122 NTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSP---AYTISKYGILGLVKCLA 178
           N  G F   K      + +  G I+            G P       ++ G+  L K LA
Sbjct: 131 NLTGTFYMCKAVYSSWMKEHGGSIVNIIVP----TKAGFPLAVHSGAARAGVYNLTKSLA 186

Query: 179 AELGQYGIRVNCVSPYGLATGMSMK--GGVDPALIESSMSQ--MGNLKGEFLKTDGIANA 234
            E    GIR+NCV+P  + +  +++  G    +  E S  +     + G     + +++ 
Sbjct: 187 LEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRI-GV---PEEVSSV 242

Query: 235 ALYLASDESSYVSGQNLVVDGGFSVVNPT 263
             +L S  +S+++GQ++ VDGG S+   +
Sbjct: 243 VCFLLSPAASFITGQSVDVDGGRSLYTHS 271

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score =  199 bits (509), Expect = 7e-64
 Identities = 76/262 (29%), Positives = 129/262 (49%), Gaps = 27/262 (10%)

Query: 15  GKVAIITGGASGIGAMAVELFHENGAKVVIADV---QDKLGE--DLADKLGQDVCYIHCD 69
            KVA++TGGA GIG    E    +G  + +AD+   +++  E   L +   Q   ++  D
Sbjct: 2   SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLD 61

Query: 70  ISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLG 129
           ++++    + +D A  K G  D++ NNAGI       +L+  + DL+++ +VN    F G
Sbjct: 62  VTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQI--KPLLEVTEEDLKQIYSVNVFSVFFG 119

Query: 130 AKHAARVMVPQ-QKGCILFTASACTEIAGL----GSPAYTISKYGILGLVKCLAAELGQY 184
            + A+R       KG I+  AS    IA +       AY+ +K+ + GL +  A EL   
Sbjct: 120 IQAASRKFDELGVKGKIINAAS----IAAIQGFPILSAYSTTKFAVRGLTQAAAQELAPK 175

Query: 185 GIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKT---------DGIANAA 235
           G  VN  +P  + TGM  +  +D  L + +   +G    E+  +         + +A   
Sbjct: 176 GHTVNAYAPGIVGTGMWEQ--IDAELSKINGKPIGENFKEYSSSIALGRPSVPEDVAGLV 233

Query: 236 LYLASDESSYVSGQNLVVDGGF 257
            +LAS+ S+YV+GQ ++VDGG 
Sbjct: 234 SFLASENSNYVTGQVMLVDGGM 255

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score =  199 bits (508), Expect = 1e-63
 Identities = 70/259 (27%), Positives = 115/259 (44%), Gaps = 16/259 (6%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQ----DKLGEDLADKLGQDVCYIH 67
            + GKVA+ITG +SGIG    E F + GA +V+   Q     +    L +K G  V  + 
Sbjct: 4   GISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVA 63

Query: 68  CDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGF 127
            D++  + V  +V++  S FG  DI+ NNAG    S  +I++      +    +  +   
Sbjct: 64  VDVATPEGVDAVVESVRSSFGGADILVNNAGT--GSNETIMEAADEKWQFYWELLVMAAV 121

Query: 128 LGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIR 187
             A+     M  +  G I+  AS C        P Y ++K  ++   K LA E+ +  IR
Sbjct: 122 RLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNIR 181

Query: 188 VNCVSPYGLATGM---------SMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYL 238
           VNC++P  + T              GG     ++S   +   +   F   + +AN  ++L
Sbjct: 182 VNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPI-KRFASPEELANFFVFL 240

Query: 239 ASDESSYVSGQNLVVDGGF 257
            S+ ++Y  G    VDGG 
Sbjct: 241 CSERATYSVGSAYFVDGGM 259

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score =  198 bits (507), Expect = 2e-63
 Identities = 73/251 (29%), Positives = 119/251 (47%), Gaps = 12/251 (4%)

Query: 13  LEGKVAIITGGASGIG-AMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHC 68
           ++ KV IITGG+SG+G  MA     E GA+VVI     +  E+   ++      +  +  
Sbjct: 4   MKEKVVIITGGSSGMGKGMATRFAKE-GARVVITGRTKEKLEEAKLEIEQFPGQILTVQM 62

Query: 69  DISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGS-ILDTPKSDLERLINVNTIGGF 127
           D+ N D++  +++    KFG++DI+ NNA     +F     D   +    +IN+   G F
Sbjct: 63  DVRNTDDIQKMIEQIDEKFGRIDILINNAAG---NFICPAEDLSVNGWNSVINIVLNGTF 119

Query: 128 LGAKHAARVMVPQQ-KGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELG-QYG 185
             ++   +  + +  KG I+   +     AG G      +K G+L + K LA E G +YG
Sbjct: 120 YCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLAMTKTLAVEWGRKYG 179

Query: 186 IRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSY 245
           IRVN ++P  +              +     Q   L G     + IA  A YL SDE++Y
Sbjct: 180 IRVNAIAPGPIERTGGADKLWISEEMAKRTIQSVPL-GRLGTPEEIAGLAYYLCSDEAAY 238

Query: 246 VSGQNLVVDGG 256
           ++G  + +DGG
Sbjct: 239 INGTCMTMDGG 249

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score =  198 bits (506), Expect = 3e-63
 Identities = 63/254 (24%), Positives = 106/254 (41%), Gaps = 12/254 (4%)

Query: 13  LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLG-EDLADKLGQDVCYIHCDIS 71
           L+GK A++TG  SGIG    ++    GA +V+    D         + G    +   D+S
Sbjct: 2   LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVHHPADLS 61

Query: 72  NEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAK 131
           +  ++  L   A  +FG +DI+ NNAGI  +    +   P    +++I +N    F G +
Sbjct: 62  DVAQIEALFALAEREFGGVDILVNNAGI--QHVAPVEQFPLESWDKIIALNLSAVFHGTR 119

Query: 132 HAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCV 191
            A   M  +  G I+  AS    +   G  AY  +K+G++GL K +  E     +  N +
Sbjct: 120 LALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLETATSNVTCNAI 179

Query: 192 SP--------YGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDES 243
            P               +  GG         +++       F+  + +    L+L S+  
Sbjct: 180 CPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPS-LAFVTPEHLGELVLFLCSEAG 238

Query: 244 SYVSGQNLVVDGGF 257
           S V G    VDGG+
Sbjct: 239 SQVRGAAWNVDGGW 252

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score =  198 bits (506), Expect = 3e-63
 Identities = 80/259 (30%), Positives = 121/259 (46%), Gaps = 19/259 (7%)

Query: 13  LEGKVAIITGGASGIG-AMAVELFHENGAKVVIADVQD-----KLGEDLADKLGQDVCYI 66
           L+GKVA++TG  SGIG  +A  L    GA +V+    D     K+   LA + G  V Y 
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATAL-AAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYD 60

Query: 67  HCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGG 126
             D+S  + V  LVD AV + G++DI+ NNAGI  +    I D P    + ++ +N    
Sbjct: 61  GADLSKGEAVRGLVDNAVRQMGRIDILVNNAGI--QHTALIEDFPTEKWDAILALNLSAV 118

Query: 127 FLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGI 186
           F G   A   M  Q  G I+  ASA   +A     AY  +K+G++G  K  A E    GI
Sbjct: 119 FHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGI 178

Query: 187 RVNCVSPYGLATGM---------SMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALY 237
             N + P  + T +            G          +S+      +F+  + +   A++
Sbjct: 179 TANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSE-KQPSLQFVTPEQLGGTAVF 237

Query: 238 LASDESSYVSGQNLVVDGG 256
           LASD ++ ++G  + VDGG
Sbjct: 238 LASDAAAQITGTTVSVDGG 256

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score =  198 bits (506), Expect = 3e-63
 Identities = 59/250 (23%), Positives = 105/250 (42%), Gaps = 12/250 (4%)

Query: 13  LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLG-EDLAD---KLGQDVCYIHC 68
            + K A++TG + G+G  A     ENG  +VI   + K    + A+   KLG  V  +  
Sbjct: 2   EQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKA 61

Query: 69  DISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFL 128
           ++    ++  +       FG+LD+  NNA         +++  ++  +  +N+N      
Sbjct: 62  NVGQPAKIKEMFQQIDETFGRLDVFVNNAASGV--LRPVMELEETHWDWTMNINAKALLF 119

Query: 129 GAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRV 188
            A+ AA++M     G I+  +S  +           +SK  +  L + LA EL    I V
Sbjct: 120 CAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAALEALTRYLAVELSPKQIIV 179

Query: 189 NCVSPYGLATGMSMKGGVDPALIESSMSQ--MGNLKGEFLKTDGIANAALYLASDESSYV 246
           N VS   + T           L+E +      G +  E      + +   +L S ++  +
Sbjct: 180 NAVSGGAIDTDALKHFPNREDLLEDARQNTPAGRM-VE---IKDMVDTVEFLVSSKADMI 235

Query: 247 SGQNLVVDGG 256
            GQ ++VDGG
Sbjct: 236 RGQTIIVDGG 245

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score =  199 bits (507), Expect = 3e-63
 Identities = 71/268 (26%), Positives = 112/268 (41%), Gaps = 15/268 (5%)

Query: 4   PSSAAPFKR--LEGKVAIITGGASGIGAMAVELFHENGAKVVIA----DVQDKLGEDLAD 57
           P+    F    L  KVA ITGG SGIG    E+F  +G   VIA             LA 
Sbjct: 14  PAYRHLFCPDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAG 73

Query: 58  KLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGS-ILDTPKSDLE 116
             G+    +  D+     V+  VD A+ +FG++DI+ N A     +F         +  +
Sbjct: 74  ATGRRCLPLSMDVRAPPAVMAAVDQALKEFGRIDILINCAAG---NFLCPAGALSFNAFK 130

Query: 117 RLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKC 176
            +++++T G F  ++           G I+   +               +K  +  + + 
Sbjct: 131 TVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRH 190

Query: 177 LAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLK--GEFLKTDGIANA 234
           LA E G   IRVN ++P  ++    ++    P    S+      L+  G       IA++
Sbjct: 191 LAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGN---KTEIAHS 247

Query: 235 ALYLASDESSYVSGQNLVVDGGFSVVNP 262
            LYLAS  +SYV+G  LV DGG  +  P
Sbjct: 248 VLYLASPLASYVTGAVLVADGGAWLTFP 275

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score =  196 bits (501), Expect = 9e-63
 Identities = 46/256 (17%), Positives = 90/256 (35%), Gaps = 27/256 (10%)

Query: 4   PSSAAPFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDV 63
            S   P      K  ++ GG+  +GA  V+ F       +  D ++    D +       
Sbjct: 11  SSGLVPRGSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNADHS------- 63

Query: 64  CYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNT 123
                  S E+E+ ++++   SK  K+D     AG       +  D     ++ +I++N 
Sbjct: 64  --FTIKDSGEEEIKSVIEKINSKSIKVDTFVCAAGGW-SGGNASSDEFLKSVKGMIDMNL 120

Query: 124 IGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQ 183
              F  A   A+++   Q G  + T ++       G  AY  +K     ++K LA+E G 
Sbjct: 121 YSAFASAHIGAKLL--NQGGLFVLTGASAALNRTSGMIAYGATKAATHHIIKDLASENGG 178

Query: 184 --YGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAAL-YLAS 240
              G     + P  L T           + +++      L         +A     +  +
Sbjct: 179 LPAGSTSLGILPVTLDTPT-----NRKYMSDANFDDWTPL-------SEVAEKLFEWSTN 226

Query: 241 DESSYVSGQNLVVDGG 256
            +S   +G  +  +  
Sbjct: 227 SDSRPTNGSLVKFETK 242

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score =  195 bits (499), Expect = 5e-62
 Identities = 66/260 (25%), Positives = 98/260 (37%), Gaps = 30/260 (11%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLAD----------KLGQ 61
            L GK   ITG + GIG         +GA V IA         L              G 
Sbjct: 3   TLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGG 62

Query: 62  DVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINV 121
               + CDI  ED+V   V   V  FG +DI+ NNA  +       LDTP    + +  V
Sbjct: 63  QGLALKCDIREEDQVRAAVAATVDTFGGIDILVNNASAI--WLRGTLDTPMKRFDLMQQV 120

Query: 122 NTIGGFLGAKHAARVMVPQQKGCILFTASACTEIA--GLGSPAYTISKYGILGLVKCLAA 179
           N  G F+ A+     ++      IL  A   +           YT++K G+  +   LAA
Sbjct: 121 NARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAHTGYTLAKMGMSLVTLGLAA 180

Query: 180 ELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQM--GNLKGEFLKTDGIANAALY 237
           E G  G+ +N + P                +I +    M  G       + + +A+AA  
Sbjct: 181 EFGPQGVAINALWPR--------------TVIATDAINMLPGVDAAACRRPEIMADAAHA 226

Query: 238 LASDESSYVSGQNLVVDGGF 257
           + + E++   GQ L+ D   
Sbjct: 227 VLTREAAGFHGQFLIDDEVL 246

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score =  194 bits (496), Expect = 7e-62
 Identities = 56/251 (22%), Positives = 101/251 (40%), Gaps = 14/251 (5%)

Query: 15  GKVAIITGGASGIGAMAVELFHENGAKVVIADV---QDKLGEDLADKLGQDVCYIHCDIS 71
           GKV ++TG + GIG   V++        V+  V   +  L + L +K G    Y+  DI+
Sbjct: 2   GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPL-KKLKEKYGDRFFYVVGDIT 60

Query: 72  NEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAK 131
            +  +  LV+ AV   GK+D +  NAG+L     ++ +   +  ++L ++N         
Sbjct: 61  EDSVLKQLVNAAVKGHGKIDSLVANAGVL-EPVQNVNEIDVNAWKKLYDINFFSIVSLVG 119

Query: 132 HAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCV 191
            A   +  +  G ++F +S    +      AY  SK  +      LA E  +  ++   V
Sbjct: 120 IALPELK-KTNGNVVFVSSDACNMYFSSWGAYGSSKAALNHFAMTLANE--ERQVKAIAV 176

Query: 192 SPYGLATGMSMK---GGVDPALIESSMSQMGNLK--GEFLKTDGIANAALYLASDE-SSY 245
           +P  + T M +         ++    +     LK   + L +   A     LA       
Sbjct: 177 APGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKENNQLLDSSVPATVYAKLALHGIPDG 236

Query: 246 VSGQNLVVDGG 256
           V+GQ L  +  
Sbjct: 237 VNGQYLSYNDP 247

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score =  192 bits (490), Expect = 4e-61
 Identities = 79/247 (31%), Positives = 119/247 (48%), Gaps = 18/247 (7%)

Query: 16  KVAIITGGASGIG-AMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNED 74
           + A++TGG+ GIG A+A  L    G +V IA       E+ A  LG     +  D+  +D
Sbjct: 3   RKALVTGGSRGIGRAIAEAL-VARGYRVAIASRNP---EEAAQSLG--AVPLPTDLEKDD 56

Query: 75  EVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAA 134
               LV  A+   G L ++ + A +  R     L+    +  R++ ++    FL A+ AA
Sbjct: 57  -PKGLVKRALEALGGLHVLVHAAAVNVR--KPALELSYEEWRRVLYLHLDVAFLLAQAAA 113

Query: 135 RVMVPQQKGCILFTASACTEIAG--LGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVS 192
             M     G +LF  S  T  AG  +  PAYT +K  +LGL + LA E  + GIRVN + 
Sbjct: 114 PHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLC 173

Query: 193 PYGLATGMSMKGGVDPALIESSMSQ--MGNLKGEFLKTDGIANAALYLASDESSYVSGQN 250
           P  + T  ++    +P L E   ++  MG         + IA  A  L  DE+ Y++GQ 
Sbjct: 174 PGYVETEFTLPLRQNPELYEPITARIPMGRW-AR---PEEIARVAAVLCGDEAEYLTGQA 229

Query: 251 LVVDGGF 257
           + VDGGF
Sbjct: 230 VAVDGGF 236

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score =  193 bits (493), Expect = 5e-61
 Identities = 60/271 (22%), Positives = 102/271 (37%), Gaps = 24/271 (8%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLAD----------KLGQ 61
            L GK   I+GG+ GIG    +    +GA V +     +    L            + G 
Sbjct: 6   SLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGG 65

Query: 62  DVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINV 121
               I  DI + D V   V   V +FG +DI  NNA  ++   GSI + P    + +  +
Sbjct: 66  QALPIVGDIRDGDAVAAAVAKTVEQFGGIDICVNNASAIN--LGSIEEVPLKRFDLMNGI 123

Query: 122 NTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAG-LGSPAYTISKYGILGLVKCLAAE 180
              G +  ++     M  +    IL  +         L    Y ++KYG+      +A E
Sbjct: 124 QVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLRPTPYMMAKYGMTLCALGIAEE 183

Query: 181 LGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLAS 240
           L   GI  N + P       +++  +     + +M++         K +  A+AA  + +
Sbjct: 184 LRDAGIASNTLWPRTTVATAAVQNLLGG---DEAMARSR-------KPEVYADAAYVVLN 233

Query: 241 DESSYVSGQNLVVDGGFSVVNPTVMRAYGLI 271
             SSY  G  L+ +        T +  Y  +
Sbjct: 234 KPSSYT-GNTLLCEDVLLESGVTDLSVYDCV 263

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score =  191 bits (489), Expect = 1e-60
 Identities = 67/264 (25%), Positives = 109/264 (41%), Gaps = 28/264 (10%)

Query: 10  FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADV-QDKLGEDLAD---KLGQDVCY 65
           F  L+GK  +ITG + GIG     LF   GAKV +         ++        G D  +
Sbjct: 2   FPDLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAF 61

Query: 66  IHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIG 125
              D++  +    LVD  V+KFG +D++ NNAG L      + +   +  + +++ N   
Sbjct: 62  FAADLATSEACQQLVDEFVAKFGGIDVLINNAGGLVGR-KPLPEIDDTFYDAVMDANIRS 120

Query: 126 GFLGAKHAARVMVPQQK-----GCILFTASACTEIAGL-----GSPAYTISKYGILGLVK 175
             +  K A   +    K       ++ T S    IAG      G+  Y  +K  +  + K
Sbjct: 121 VVMTTKFALPHLAAAAKASGQTSAVISTGS----IAGHTGGGPGAGLYGAAKAFLHNVHK 176

Query: 176 CLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQ--MGNLKGEFLKTDGIAN 233
                  + G+R N VSP  + T           + +   +   MG   G     + +A 
Sbjct: 177 NWVDFHTKDGVRFNIVSPGTVDTAFH--ADKTQDVRDRISNGIPMGRF-G---TAEEMAP 230

Query: 234 AALYLASDE-SSYVSGQNLVVDGG 256
           A L+ AS   S Y++GQ L ++GG
Sbjct: 231 AFLFFASHLASGYITGQVLDINGG 254

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score =  191 bits (488), Expect = 1e-60
 Identities = 56/248 (22%), Positives = 85/248 (34%), Gaps = 10/248 (4%)

Query: 16  KVAIITGGASGIG-AMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNED 74
             AI+T      G   A+ L  E G  V   D   K  ++L         Y      +E 
Sbjct: 2   STAIVTNVKHFGGMGSALRL-SEAGHTVACHDESFKQKDELEAFAET---YPQLKPMSEQ 57

Query: 75  EVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAA 134
           E   L++   S +G++D++ +N       F  I      D    +    I  F      A
Sbjct: 58  EPAELIEAVTSAYGQVDVLVSNDIFA-PEFQPIDKYAVEDYRGAVEALQIRPFALVNAVA 116

Query: 135 RVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPY 194
             M  ++ G I+F  SA           YT ++ G   L   L+ ELG+Y I V  + P 
Sbjct: 117 SQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNIPVFAIGPN 176

Query: 195 GLATGMSMKGGVDPALIESSMSQMGNLK----GEFLKTDGIANAALYLASDESSYVSGQN 250
            L +  S           +        K            +     +LAS    Y++GQ 
Sbjct: 177 YLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASGSCDYLTGQV 236

Query: 251 LVVDGGFS 258
             + GGF 
Sbjct: 237 FWLAGGFP 244

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score =  191 bits (487), Expect = 2e-60
 Identities = 57/249 (22%), Positives = 88/249 (35%), Gaps = 9/249 (3%)

Query: 16  KVAIITGGASGIGAMAVELFHENGAKVVIADV-QDKLGEDLADKLGQDVCYIHCDISNED 74
            V  ITG ASGIGA   EL    G  V+  D  Q  +  DL+   G     +   +    
Sbjct: 2   SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEADLST-PGGRETAVAAVLDRCG 60

Query: 75  EVI-----NLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLG 129
            V+            +    L +  N  G+     G      +      + V +I     
Sbjct: 61  GVLDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQP 120

Query: 130 AKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVN 189
                 ++     G          E  G    AY  SKY +  L +    +    G+R+N
Sbjct: 121 GAAELPMVEAMLAGDEARAIELA-EQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLN 179

Query: 190 CVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQ 249
            V+P  + T +      DP   ES+   +  L G   +   +A A  +L   ++S++ G 
Sbjct: 180 VVAPGAVETPLLQASKADPRYGESTRRFVAPL-GRGSEPREVAEAIAFLLGPQASFIHGS 238

Query: 250 NLVVDGGFS 258
            L VDGG  
Sbjct: 239 VLFVDGGMD 247

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score =  188 bits (481), Expect = 1e-59
 Identities = 67/253 (26%), Positives = 111/253 (43%), Gaps = 16/253 (6%)

Query: 11  KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLG-EDLAD---KLGQDVCYI 66
           +R   +  ++ G    IG      F + GA VV+       G         KLG+    I
Sbjct: 4   QRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAI 63

Query: 67  HCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGG 126
             D++N  EV   +  A  KFG++  + + AG L     +I +  ++   ++++VN    
Sbjct: 64  KADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIA-RKTIAEMDEAFWHQVLDVNLTSL 122

Query: 127 FLGAKHAARVMVPQQKGCILFTASACTEIAGL-GSPAYTISKYGILGLVKCLAAELGQYG 185
           FL AK A   M   + G I+  +S      G  G+ AY  SK  ++   + LA E+G   
Sbjct: 123 FLTAKTALPKM--AKGGAIVTFSSQAGRDGGGPGALAYATSKGAVMTFTRGLAKEVGP-K 179

Query: 186 IRVNCVSPYGLATGMSMKGGVDPALIESSMSQ--MGNLKGEFLKTDGIANAALYLASDES 243
           IRVN V P  ++T         P + E       +    G    ++ +A    +LASD++
Sbjct: 180 IRVNAVCPGMISTTFHDTFT-KPEVRERVAGATSLKRE-GS---SEDVAGLVAFLASDDA 234

Query: 244 SYVSGQNLVVDGG 256
           +YV+G    ++GG
Sbjct: 235 AYVTGACYDINGG 247

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score =  188 bits (480), Expect = 2e-59
 Identities = 64/249 (25%), Positives = 110/249 (44%), Gaps = 24/249 (9%)

Query: 11  KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIH 67
             L G+VA++TG + GIGA         GA+VV+     +    +  ++   G +     
Sbjct: 25  SSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHA 84

Query: 68  CDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGF 127
           CD+S+ D +       ++  G+ D++ NNAG+     G +     ++ + LI VN    +
Sbjct: 85  CDLSHSDAIAAFATGVLAAHGRCDVLVNNAGVG-WFGGPLHTMKPAEWDALIAVNLKAPY 143

Query: 128 LGAKHAARVMVPQQKGCILFTASACTEIAGL----GSPAYTISKYGILGLVKCLAAELGQ 183
           L  +  A  M+  ++G I+  +S    +AG        AYT SK+G+ GL+   A EL Q
Sbjct: 144 LLLRAFAPAMIAAKRGHIINISS----LAGKNPVADGAAYTASKWGLNGLMTSAAEELRQ 199

Query: 184 YGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDES 243
           + +RV+ V+P          G V         ++   L    ++ D IA+    LA+   
Sbjct: 200 HQVRVSLVAP----------GSVRTEFGVGLSAKKSALGA--IEPDDIADVVALLATQAD 247

Query: 244 SYVSGQNLV 252
                + LV
Sbjct: 248 QSFISEVLV 256

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score =  189 bits (481), Expect = 4e-59
 Identities = 68/253 (26%), Positives = 113/253 (44%), Gaps = 12/253 (4%)

Query: 4   PSSAAPFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---G 60
            S        +G+ A++TGGASGIG      F   GA++V++DV     E   + L   G
Sbjct: 20  GSMDGFLSGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQG 79

Query: 61  QDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLIN 120
            D   + CD+ + DE++ L D A    G +D++++NAGI+    G +      D   +I+
Sbjct: 80  FDAHGVVCDVRHLDEMVRLADEAFRLLGGVDVVFSNAGIV--VAGPLAQMNHDDWRWVID 137

Query: 121 VNTIGGFLGAKHAARVMVPQ-QKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAA 179
           ++  G     +     ++ Q   G I FTAS    +   G   Y ++KYG++GL + LA 
Sbjct: 138 IDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKYGVVGLAETLAR 197

Query: 180 ELGQYGIRVNCVSPYGLATGM----SMKGGVDPALIESSMSQMGNL--KGEFLKTDGIAN 233
           E+   GI V+ + P  + T +        G D  +  +     G L  + E +  D +A 
Sbjct: 198 EVKPNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDESVSADDVAR 257

Query: 234 AALYLASDESSYV 246
                      Y+
Sbjct: 258 LTADAILANRLYI 270

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score =  188 bits (480), Expect = 4e-59
 Identities = 69/266 (25%), Positives = 117/266 (43%), Gaps = 11/266 (4%)

Query: 1   MNGPSSAAPFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLG 60
           +   S   P+  L G++A++TGG+ GIG M  +   E GA+V I     +   D A +L 
Sbjct: 15  VPRGSHMHPYFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLS 74

Query: 61  Q--DVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERL 118
              D   I  D+S+E     L         +LDI+ NNAG       ++   P S  E++
Sbjct: 75  AYGDCQAIPADLSSEAGARRLAQALGELSARLDILVNNAGTSWG--AALESYPVSGWEKV 132

Query: 119 INVNTIGGFLGAKHAARVM----VPQQKGCILFTAS-ACTEIAGLGSPAYTISKYGILGL 173
           + +N    F   +    ++      +    ++   S A     G  + AY  SK  +  L
Sbjct: 133 MQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPSKAALHQL 192

Query: 174 VKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIAN 233
            + LA EL    I VN ++P    + M+     DP  +E+  +      G + + + +A 
Sbjct: 193 SRMLAKELVGEHINVNVIAPGRFPSRMTRHIANDPQALEADSAS--IPMGRWGRPEEMAA 250

Query: 234 AALYLASDESSYVSGQNLVVDGGFSV 259
            A+ LA    +Y++G  + +DGGF +
Sbjct: 251 LAISLAGTAGAYMTGNVIPIDGGFHL 276

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score =  187 bits (478), Expect = 8e-59
 Identities = 65/275 (23%), Positives = 114/275 (41%), Gaps = 32/275 (11%)

Query: 11  KRLEGKVAIITGGASGIGAMAVELFHENGAKVVI-----ADVQDKLGEDLADKLGQDVCY 65
             +E   A++TG A  IG       H+ G +VVI     A+    L ++L  +       
Sbjct: 19  SHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVV 78

Query: 66  IHCDISNED----EVINLVDTAVSKFGKLDIMYNNAGI--------LDRSFGSILDTPKS 113
              D++N +        ++++    FG+ D++ NNA           D    S   T ++
Sbjct: 79  CQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVET 138

Query: 114 DLERLINVNTIGGFLGAKHAARVMVP------QQKGCILFTASACTEIAGLGSPAYTISK 167
            +  LI  N I  FL     A+               I+    A  +   +    Y + K
Sbjct: 139 QVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGK 198

Query: 168 YGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQ--MGNLKGEF 225
           + ++GL +  A EL  YGIRVN V+P G  + + +   +     +    +  +G  +   
Sbjct: 199 HALVGLTQSAALELAPYGIRVNGVAP-G-VSLLPVA--MGEEEKDKWRRKVPLGRREAS- 253

Query: 226 LKTDGIANAALYLASDESSYVSGQNLVVDGGFSVV 260
              + IA+A ++L S  + Y++G  + VDGG S+V
Sbjct: 254 --AEQIADAVIFLVSGSAQYITGSIIKVDGGLSLV 286

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score =  187 bits (477), Expect = 1e-58
 Identities = 65/285 (22%), Positives = 112/285 (39%), Gaps = 38/285 (13%)

Query: 1   MNGPSSAAPFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVI-----ADVQDKLGEDL 55
           MN  S     +  E   A+ITGGA  IG       H+ G +VV+          +L  +L
Sbjct: 1   MNETSH----EASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAEL 56

Query: 56  ADKLGQDVCYIHCDISNEDEVIN----LVDTAVSKFGKLDIMYNNAGI---------LDR 102
                        D+S    +++    ++D +   FG+ D++ NNA            D 
Sbjct: 57  NAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDT 116

Query: 103 SFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVP-----QQKGCILFTASACTEIAG 157
           +  +      + +  L   N +      +  AR          +   ++    A T++  
Sbjct: 117 NGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPL 176

Query: 158 LGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMS-MKGGVDPALIESSMS 216
            G   YT++K+ + GL +  A EL    IRVN V+P     G+S +   +     E    
Sbjct: 177 PGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAP-----GLSLLPPAMPQETQEEYRR 231

Query: 217 Q--MGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSV 259
           +  +G  +        IA+A  +L S ++ Y++G  L VDGG  +
Sbjct: 232 KVPLGQSEAS---AAQIADAIAFLVSKDAGYITGTTLKVDGGLIL 273

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score =  187 bits (476), Expect = 1e-58
 Identities = 59/259 (22%), Positives = 104/259 (40%), Gaps = 16/259 (6%)

Query: 11  KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLG-EDLADKL---GQDVCYI 66
            +    VAI+TGG  GIG         +G  + I  + D  G   +  +L   G  V ++
Sbjct: 25  TQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFL 84

Query: 67  HCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGG 126
             D+++       VD  V++FG++D + NNAGI        LD    + + ++ VN  G 
Sbjct: 85  RADLADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGT 144

Query: 127 FLGAKHAARVMV---PQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQ 183
               +   + M+    +    I+   S    +       Y +SK G+    + LA  L +
Sbjct: 145 VFFTQAVLKAMLASDARASRSIINITSVSAVMTSPERLDYCMSKAGLAAFSQGLALRLAE 204

Query: 184 YGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLK---GEFLKTDGIANAALYLAS 240
            GI V  V P  + + M+       A+       + +       + + + I N    LA 
Sbjct: 205 TGIAVFEVRPGIIRSDMT------AAVSGKYDGLIESGLVPMRRWGEPEDIGNIVAGLAG 258

Query: 241 DESSYVSGQNLVVDGGFSV 259
            +  + +G  +  DGG S+
Sbjct: 259 GQFGFATGSVIQADGGLSI 277

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score =  185 bits (473), Expect = 2e-58
 Identities = 69/251 (27%), Positives = 114/251 (45%), Gaps = 14/251 (5%)

Query: 11  KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDI 70
           +RL GK A++TG A GIG         +GA V+++D+  +  +  A  +G+    I  DI
Sbjct: 2   ERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADI 61

Query: 71  SNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGA 130
           S+   V  L     +  G +DI+ NNA I+   F +  D       ++I+VN  G F+  
Sbjct: 62  SDPGSVKALFAEIQALTGGIDILVNNASIV--PFVAWDDVDLDHWRKIIDVNLTGTFIVT 119

Query: 131 KHAARVMVPQQK-GCILFTASACTEIAGL----GSPAYTISKYGILGLVKCLAAELGQYG 185
           +     M    K G ++  AS               AY  +K G++G  + LA ELG+Y 
Sbjct: 120 RAGTDQMRAAGKAGRVISIAS----NTFFAGTPNMAAYVAAKGGVIGFTRALATELGKYN 175

Query: 186 IRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSY 245
           I  N V+P  + +                +  +  +     + + IA+   +LASD++ +
Sbjct: 176 ITANAVTPGLIESDGVKA--SPHNEAFGFVEMLQAM-KGKGQPEHIADVVSFLASDDARW 232

Query: 246 VSGQNLVVDGG 256
           ++GQ L VD G
Sbjct: 233 ITGQTLNVDAG 243

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score =  185 bits (473), Expect = 2e-58
 Identities = 69/257 (26%), Positives = 118/257 (45%), Gaps = 21/257 (8%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDIS 71
           +L+ +V I+TG +SG+GA    +  + GA V+  D++   GE+ A +LG  V + + D++
Sbjct: 4   QLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVT 63

Query: 72  NEDEVINLVDTAVSKFGKLDIMYNNAGILD--RSFGSILDTPKSDLERLINVNTIGGFLG 129
           NE +    +  A  +FG +  + N AG     +  G           R + VN IG F  
Sbjct: 64  NEADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNM 123

Query: 130 AKHAARVMVPQ------QKGCILFTASACTEIAGL----GSPAYTISKYGILGLVKCLAA 179
            + AA VM         ++G I+ TAS    IA      G  AY  SK G+  L    A 
Sbjct: 124 IRLAAEVMSQGEPDADGERGVIVNTAS----IAAFDGQIGQAAYAASKGGVAALTLPAAR 179

Query: 180 ELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLA 239
           EL ++GIRV  ++P    T M       P  ++ +++          + +  A    ++ 
Sbjct: 180 ELARFGIRVVTIAPGIFDTPMMAGM---PQDVQDALAASVPFPPRLGRAEEYAALVKHIC 236

Query: 240 SDESSYVSGQNLVVDGG 256
             E++ ++G+ + +DG 
Sbjct: 237 --ENTMLNGEVIRLDGA 251

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score =  186 bits (474), Expect = 2e-58
 Identities = 75/271 (27%), Positives = 118/271 (43%), Gaps = 20/271 (7%)

Query: 1   MNGPSSAAPFKRLEGKVAIITGGASGIG-AMAVELFHENGAKVVIADVQDKLG-EDLAD- 57
           +     +   K L GKVA+ TG   GIG  +A+EL    GA VV+         E++   
Sbjct: 7   ITSSGPSDASKPLAGKVALTTGAGRGIGRGIAIEL-GRRGASVVVNYGSSSKAAEEVVAE 65

Query: 58  --KLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDL 115
             KLG     I  DIS   EV+ L D AVS FG LD + +N+G+    +   L+  +   
Sbjct: 66  LKKLGAQGVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGME--VWCDELEVTQELF 123

Query: 116 ERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGL-GSPAYTISKYGILGLV 174
           +++ N+NT G F  A+   +    ++ G I+ T+S    + G+     Y  SK  + G  
Sbjct: 124 DKVFNLNTRGQFFVAQQGLKHC--RRGGRIILTSSIAAVMTGIPNHALYAGSKAAVEGFC 181

Query: 175 KCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKT------ 228
           +  A + G  G+ VNC++P G+ T M  +     A           +             
Sbjct: 182 RAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRI 241

Query: 229 ---DGIANAALYLASDESSYVSGQNLVVDGG 256
                I  A   L  +ES +++GQ + + GG
Sbjct: 242 GYPADIGRAVSALCQEESEWINGQVIKLTGG 272

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score =  185 bits (473), Expect = 2e-58
 Identities = 65/261 (24%), Positives = 112/261 (42%), Gaps = 16/261 (6%)

Query: 6   SAAPFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL------ 59
           S   +  L+ KV +I GG   +GA+  + F      +V+   Q K   D A+KL      
Sbjct: 2   SLTKYHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAK-DSDTANKLKDELED 60

Query: 60  -GQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERL 118
            G  V     D+SNE+EV  L D A  +FGK+DI  N  G +      I++T +++ + +
Sbjct: 61  QGAKVALYQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVL--KKPIVETSEAEFDAM 118

Query: 119 INVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLA 178
             +N    +   K AA+ M     G I+  A++           Y  +K  +    +  +
Sbjct: 119 DTINNKVAYFFIKQAAKHM--NPNGHIITIATSLLAAYTGFYSTYAGNKAPVEHYTRAAS 176

Query: 179 AELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYL 238
            EL +  I VN ++P  + T                 SQ   +  +  K + IA    +L
Sbjct: 177 KELMKQQISVNAIAPGPMDTSFFYGQE-TKESTAFHKSQ--AMGNQLTKIEDIAPIIKFL 233

Query: 239 ASDESSYVSGQNLVVDGGFSV 259
            +D   +++GQ +  +GG++ 
Sbjct: 234 TTD-GWWINGQTIFANGGYTT 253

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score =  185 bits (471), Expect = 3e-58
 Identities = 49/249 (19%), Positives = 97/249 (38%), Gaps = 19/249 (7%)

Query: 13  LEGKVAIITGGASGIGAMAVELFHENGAKVVIADV-QDKLGEDLADKLGQDVCYIHCDIS 71
           +     I+TG  SG+G        E G +V +      +L +     LG  V  I  D++
Sbjct: 1   MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRL-QQQELLLGNAVIGIVADLA 59

Query: 72  NEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAK 131
           + ++V      AV   G  +++ + AG     FG +       + R++  N +   L A+
Sbjct: 60  HHEDVDVAFAAAVEWGGLPELVLHCAGTG--EFGPVGVYTAEQIRRVMESNLVSTILVAQ 117

Query: 132 HAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCV 191
              R++  ++ G +    S+  ++       Y  SK+G+ G ++ L AEL    +R+  +
Sbjct: 118 QTVRLIG-ERGGVLANVLSSAAQVGKANESLYCASKWGMRGFLESLRAELKDSPLRLVNL 176

Query: 192 SPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALY-LASDESSYVSGQN 250
            P           G+     +++          F+  +  A   L  L +  S +V+   
Sbjct: 177 YP----------SGIRSEFWDNTDHVD---PSGFMTPEDAAAYMLDALEARSSCHVTDLF 223

Query: 251 LVVDGGFSV 259
           +  + G   
Sbjct: 224 IGRNEGHHH 232

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score =  186 bits (474), Expect = 3e-58
 Identities = 70/262 (26%), Positives = 125/262 (47%), Gaps = 20/262 (7%)

Query: 11  KRLEGKVAIITGGASGIG-AMAVELFHENGAKVVIADVQDKLG-EDLAD---KLGQDVCY 65
             LEGKVA++TG   GIG  MA+EL    G KV++         E++     K G D   
Sbjct: 25  ASLEGKVALVTGAGRGIGREMAMEL-GRRGCKVIVNYANSTESAEEVVAAIKKNGSDAAC 83

Query: 66  IHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIG 125
           +  ++   ++++ + + AV  FGKLDI+ +N+G++  SFG + D    + +R+  +NT G
Sbjct: 84  VKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVV--SFGHVKDVTPEEFDRVFTINTRG 141

Query: 126 GFLGAKHAARVMVPQQKGCILFTASACTEIAGL-GSPAYTISKYGILGLVKCLAAELGQY 184
            F  A+ A + +  +  G ++   S   +   +     Y+ SK  I    +C+A ++   
Sbjct: 142 QFFVAREAYKHL--EIGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADK 199

Query: 185 GIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKT---------DGIANAA 235
            I VN V+P G+ T M      +      ++S     +   ++            IA   
Sbjct: 200 KITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVV 259

Query: 236 LYLASDESSYVSGQNLVVDGGF 257
            +LAS++  +V+G+ + +DGG 
Sbjct: 260 CFLASNDGGWVTGKVIGIDGGA 281

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score =  185 bits (472), Expect = 4e-58
 Identities = 81/275 (29%), Positives = 128/275 (46%), Gaps = 25/275 (9%)

Query: 1   MNGPSSAAPFKRLEGKVAIITGGASGIG-AMAVELFHENGAKVVIADVQDKLGEDLADKL 59
           +   S      RL+GKVA++TG   GIG A+AV L    GAKVV+           A+K+
Sbjct: 4   VENASETYIPGRLDGKVALVTGSGRGIGAAVAVHL-GRLGAKVVVNYANS---TKDAEKV 59

Query: 60  -------GQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPK 112
                  G D   I  DI    E++ L D AV+ FG LDI  +N+G++  SFG + D  +
Sbjct: 60  VSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVV--SFGHLKDVTE 117

Query: 113 SDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGL-GSPAYTISKYGIL 171
            + +R+ ++NT G F  A+ A R +   + G I+ T+S  ++   +     Y+ SK  + 
Sbjct: 118 EEFDRVFSLNTRGQFFVAREAYRHL--TEGGRIVLTSSNTSKDFSVPKHSLYSGSKGAVD 175

Query: 172 GLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLK--------G 223
             V+  + + G   I VN V+P G  T M  +         +S +     +         
Sbjct: 176 SFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLH 235

Query: 224 EFLKTDGIANAALYLASDESSYVSGQNLVVDGGFS 258
                  +AN   +L S E  +V+G+ L +DGG +
Sbjct: 236 RNGWPQDVANVVGFLVSKEGEWVNGKVLTLDGGAA 270

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score =  184 bits (470), Expect = 8e-58
 Identities = 67/254 (26%), Positives = 105/254 (41%), Gaps = 17/254 (6%)

Query: 11  KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL----GQDVCYI 66
             L+G+  ++TGG  GIG     +F   GA V +A       +     L       V  +
Sbjct: 6   FDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGV 65

Query: 67  HCDISNEDEVINLVDTAVSKFGKLDIMYNNAGIL-DRSFGSILDTPKSDLERLINVNTIG 125
             D+S+  +   L   AV +FG +D++  NAG+  D     +       L  +  VN  G
Sbjct: 66  QTDVSDRAQCDALAGRAVEEFGGIDVVCANAGVFPD---APLATMTPEQLNGIFAVNVNG 122

Query: 126 GFLGAKHAARVMVPQQKGCILFTASACTEIAG-LGSPAYTISKYGILGLVKCLAAELGQY 184
            F   +     ++    G ++ T+S    I G  G   Y  +K   LG ++  A EL  +
Sbjct: 123 TFYAVQACLDALIASGSGRVVLTSSITGPITGYPGWSHYGATKAAQLGFMRTAAIELAPH 182

Query: 185 GIRVNCVSPYGLATGMSMKGGVDPALIESSMSQ--MGNLKGEFLKTDGIANAALYLASDE 242
            I VN + P  + T            I S       G L G     + I + A +LA+ E
Sbjct: 183 KITVNAIMPGNIMTEGL--LENGEEYIASMARSIPAGAL-GT---PEDIGHLAAFLATKE 236

Query: 243 SSYVSGQNLVVDGG 256
           + Y++GQ + VDGG
Sbjct: 237 AGYITGQAIAVDGG 250

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score =  184 bits (469), Expect = 1e-57
 Identities = 78/267 (29%), Positives = 114/267 (42%), Gaps = 22/267 (8%)

Query: 3   GPSSAAPFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLG-EDLADKL-- 59
           G  +       +  V ++TGG+ GIGA    L    G +V +    ++   + +   +  
Sbjct: 14  GTENLYFQSMSDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITE 73

Query: 60  -GQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERL 118
            G +   I  D+ N  ++  +      +FG+LD + NNAGI+D     + +     +ER+
Sbjct: 74  SGGEAVAIPGDVGNAADIAAMFSAVDRQFGRLDGLVNNAGIVDYP-QRVDEMSVERIERM 132

Query: 119 INVNTIGGFLGAKHAARVMVPQ---QKGCILFTASACTEIAGLGSP----AYTISKYGIL 171
           + VN  G  L A  A R M      Q G I+  +S     A LGS      Y  SK  I 
Sbjct: 133 LRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSM---AAILGSATQYVDYAASKAAID 189

Query: 172 GLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQ--MGNLKGEFLKTD 229
                LA E+   GIRVN V P  + T +   GG  P           M    G     +
Sbjct: 190 TFTIGLAREVAAEGIRVNAVRPGIIETDLHASGG-LPDRAREMAPSVPMQRA-GM---PE 244

Query: 230 GIANAALYLASDESSYVSGQNLVVDGG 256
            +A+A LYL S  +SYV+G  L V GG
Sbjct: 245 EVADAILYLLSPSASYVTGSILNVSGG 271

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score =  183 bits (467), Expect = 2e-57
 Identities = 70/255 (27%), Positives = 118/255 (46%), Gaps = 15/255 (5%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDIS 71
            ++G VA+ITGGASG+G    E     GA  V+ D+ +  GE  A KLG +  +   D++
Sbjct: 9   SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVT 68

Query: 72  NEDEVINLVDTAVSKFGKLDIMYNNAGILD----RSFGSILDTPKSDLERLINVNTIGGF 127
           +E +V   +  A  KFG++D+  N AGI       +          D +R+++VN +G F
Sbjct: 69  SEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTF 128

Query: 128 LGAKHAARVMVPQ------QKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAEL 181
              +  A  M         Q+G I+ TAS       +G  AY+ SK GI+G+   +A +L
Sbjct: 129 NVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDL 188

Query: 182 GQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASD 241
              GIRV  ++P    T +       P  + + ++               A+    +   
Sbjct: 189 APIGIRVMTIAPGLFGTPLLTSL---PEKVCNFLASQVPFPSRLGDPAEYAHLVQAII-- 243

Query: 242 ESSYVSGQNLVVDGG 256
           E+ +++G+ + +DG 
Sbjct: 244 ENPFLNGEVIRLDGA 258

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score =  182 bits (465), Expect = 3e-57
 Identities = 51/245 (20%), Positives = 86/245 (35%), Gaps = 22/245 (8%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHC 68
                   + G    IGA   + F   G  V       +    L  ++   G  +     
Sbjct: 4   TPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSL 63

Query: 69  DISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFL 128
           D  NEDEV   ++ A      L++   N G        IL+T      ++  +    GF+
Sbjct: 64  DARNEDEVTAFLN-AADAHAPLEVTIFNVGA--NVNFPILETTDRVFRKVWEMACWAGFV 120

Query: 129 GAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRV 188
             + +AR+M+   +G I FT +  +   G G  A+  +K+G+  + + +A EL    I V
Sbjct: 121 SGRESARLMLAHGQGKIFFTGATASLRGGSGFAAFASAKFGLRAVAQSMARELMPKNIHV 180

Query: 189 -NCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGE-----FLKTDGIANAALYLASDE 242
            + +             GVD A +     QM            +    +A A   L    
Sbjct: 181 AHLIID----------SGVDTAWVRERREQMFGKDALANPDLLMPPAAVAGAYWQLYQQP 230

Query: 243 SSYVS 247
            S  +
Sbjct: 231 KSAWT 235

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score =  182 bits (465), Expect = 4e-57
 Identities = 70/256 (27%), Positives = 109/256 (42%), Gaps = 20/256 (7%)

Query: 11  KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL-------GQDV 63
             L GK A +TGG+ GIGA   +     GA V +  V      + A  +       G   
Sbjct: 27  ISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNA---AERAQAVVSEIEQAGGRA 83

Query: 64  CYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNT 123
             I  D  + + +   +   V   G LDI+ N+AGI       + +T  +D + ++ VN 
Sbjct: 84  VAIRADNRDAEAIEQAIRETVEALGGLDILVNSAGIW--HSAPLEETTVADFDEVMAVNF 141

Query: 124 IGGFLGAKHAARVMVPQQKGCILFTASACTEIAGL-GSPAYTISKYGILGLVKCLAAELG 182
              F+  + A+R +     G I+   S   E+    G   Y+ SK  + GL K LA +LG
Sbjct: 142 RAPFVAIRSASRHL--GDGGRIITIGSNLAELVPWPGISLYSASKAALAGLTKGLARDLG 199

Query: 183 QYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDE 242
             GI VN V P    T M+   G         ++      G + +   IA    +LA  +
Sbjct: 200 PRGITVNIVHPGSTDTDMNPADGDHAEAQRERIAT-----GSYGEPQDIAGLVAWLAGPQ 254

Query: 243 SSYVSGQNLVVDGGFS 258
             +V+G +L +DGG +
Sbjct: 255 GKFVTGASLTIDGGAN 270

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score =  182 bits (465), Expect = 8e-57
 Identities = 68/261 (26%), Positives = 110/261 (42%), Gaps = 17/261 (6%)

Query: 4   PSSAAPFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADV----QDKLGEDLADKL 59
           P+       L  +  ++TGG  GIG     +F   GA V +A         +  +L +  
Sbjct: 30  PAERKVMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELG 89

Query: 60  GQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGIL-DRSFGSILDTPKSDLERL 118
             +V  +  D+S+     +   T V  FG LD++  NAGI  +     +       L  +
Sbjct: 90  AGNVIGVRLDVSDPGSCADAARTVVDAFGALDVVCANAGIFPE---ARLDTMTPEQLSEV 146

Query: 119 INVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAG-LGSPAYTISKYGILGLVKCL 177
           ++VN  G     +     +    +G ++ T+S    + G  G   Y  SK   LG ++  
Sbjct: 147 LDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSHYGASKAAQLGFMRTA 206

Query: 178 AAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQ--MGNLKGEFLKTDGIANAA 235
           A EL   G+ VN + P  + T   +   +    I        MG L G       I + A
Sbjct: 207 AIELAPRGVTVNAILPGNILTEGLVD--MGEEYISGMARSIPMGML-GS---PVDIGHLA 260

Query: 236 LYLASDESSYVSGQNLVVDGG 256
            +LA+DE+ Y++GQ +VVDGG
Sbjct: 261 AFLATDEAGYITGQAIVVDGG 281

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score =  181 bits (462), Expect = 1e-56
 Identities = 69/254 (27%), Positives = 112/254 (44%), Gaps = 21/254 (8%)

Query: 13  LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL-------GQDVCY 65
              KVAI+TG + GIGA        +G  VVI           A+++       G     
Sbjct: 25  ETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGK---AAAAEEVAGKIEAAGGKALT 81

Query: 66  IHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIG 125
              D+S+   V  L  TA   FG +D++ NNAGI+     +I +T  +  +R+I VN  G
Sbjct: 82  AQADVSDPAAVRRLFATAEEAFGGVDVLVNNAGIM--PLTTIAETGDAVFDRVIAVNLKG 139

Query: 126 GFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYG 185
            F   + AA+ +  +  G I+  +++   +       Y  +K G+  +   L+ EL    
Sbjct: 140 TFNTLREAAQRL--RVGGRIINMSTSQVGLLHPSYGIYAAAKAGVEAMTHVLSKELRGRD 197

Query: 186 IRVNCVSPYGLATGMSMKGGVDPALIESSMSQ--MGNLKGEFLKTDGIANAALYLASDES 243
           I VN V+P   AT + ++G     + +       +  L G       IA A  +LA  + 
Sbjct: 198 ITVNAVAPGPTATDLFLEGK-SDEVRDRFAKLAPLERL-GT---PQDIAGAVAFLAGPDG 252

Query: 244 SYVSGQNLVVDGGF 257
           ++V+GQ L  +GG 
Sbjct: 253 AWVNGQVLRANGGI 266

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score =  180 bits (458), Expect = 3e-56
 Identities = 89/251 (35%), Positives = 135/251 (53%), Gaps = 21/251 (8%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDIS 71
           RL+ K  +ITG A GIG   +ELF + GA++V  D+++    + A+ +G     +  D++
Sbjct: 2   RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVG--AHPVVMDVA 59

Query: 72  NEDEVINLVDTAVSKFGKLDIMYNNAGIL-DRSFGSILDTPKSDLERLINVNTIGGFLGA 130
           +   V      A++  G+LD + + AGI  D         P  D E ++ VN  G FL A
Sbjct: 60  DPASVERGFAEALAHLGRLDGVVHYAGITRD---NFHWKMPLEDWELVLRVNLTGSFLVA 116

Query: 131 KHAARVMVPQQKGCILFTASACTEIAGLGSPA---YTISKYGILGLVKCLAAELGQYGIR 187
           K A+  M  +  G I+ TAS       LG+     Y  S  G++GL + LA ELG++GIR
Sbjct: 117 KAASEAMREKNPGSIVLTAS----RVYLGNLGQANYAASMAGVVGLTRTLALELGRWGIR 172

Query: 188 VNCVSPYGLATGMSMKGGVDPALIESSMSQ--MGNLKGEFLKTDGIANAALYLASDESSY 245
           VN ++P  + T M+ K  V   + E +++   +G   G   K   +A AAL+L SDESS+
Sbjct: 173 VNTLAPGFIETRMTAK--VPEKVREKAIAATPLGRA-G---KPLEVAYAALFLLSDESSF 226

Query: 246 VSGQNLVVDGG 256
           ++GQ L VDGG
Sbjct: 227 ITGQVLFVDGG 237

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score =  180 bits (458), Expect = 4e-56
 Identities = 48/250 (19%), Positives = 90/250 (36%), Gaps = 18/250 (7%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQD-VCYIHCDI 70
            L     +ITG +  +G        E+G +V+I+   +        +L Q     ++ D 
Sbjct: 24  TLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTE---HASVTELRQAGAVALYGDF 80

Query: 71  SNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGA 130
           S E  ++  +D   ++   L  + +NA                +  R+ +V+ +  +L  
Sbjct: 81  SCETGIMAFIDLLKTQTSSLRAVVHNASEWLAE---TPGEEADNFTRMFSVHMLAPYLIN 137

Query: 131 KHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNC 190
            H   ++   +   I+  +   T        AY  +K G+  L    AA      ++VN 
Sbjct: 138 LHCEPLLTASEVADIVHISDDVTRKGSSKHIAYCATKAGLESLTLSFAARFAP-LVKVNG 196

Query: 191 VSPYGLATGMSMKGGVDPALIESS-MSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQ 249
           ++P  L              +  S +             + I  +  YL    S+YV+G 
Sbjct: 197 IAPALLMFQPKDDAAYRANALAKSALGIEP-------GAEVIYQSLRYLLD--STYVTGT 247

Query: 250 NLVVDGGFSV 259
            L V+GG  V
Sbjct: 248 TLTVNGGRHV 257

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score =  179 bits (456), Expect = 7e-56
 Identities = 43/257 (16%), Positives = 74/257 (28%), Gaps = 31/257 (12%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVI----ADVQDKLGEDLADKLGQDVCYIH 67
            L  K  I      GIG        +   K  +     +    L E  A     ++ +  
Sbjct: 2   DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHT 61

Query: 68  CDIS-NEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGG 126
            D++    E   L+     +   +DI+ N AGILD             +ER I +N  G 
Sbjct: 62  YDVTVPVAESKKLLKKIFDQLKTVDILINGAGILD----------DHQIERTIAINFTGL 111

Query: 127 FLGAKHAARVMVPQQKG---CILFTASACTEIAGL----GSPAYTISKYGILGLVKCLAA 179
                        ++ G    I    S    + G       P Y+ SK  ++     LA 
Sbjct: 112 VNTTTAILDFWDKRKGGPGGIIANICS----VTGFNAIHQVPVYSASKAAVVSFTNSLAK 167

Query: 180 ELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLA 239
                G+    ++P    T +         +       +  L      ++      +   
Sbjct: 168 LAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELL--LSHPTQTSEQCGQNFVKAI 225

Query: 240 SDESSYVSGQNLVVDGG 256
                  +G    +D G
Sbjct: 226 EANK---NGAIWKLDLG 239

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score =  178 bits (455), Expect = 1e-55
 Identities = 61/254 (24%), Positives = 111/254 (43%), Gaps = 14/254 (5%)

Query: 12  RLEGKVAIITGGASGIG-AMAVELFHENGAKVVIADVQDKLGEDLAD---KLGQDVCYIH 67
            + G+V ++TG + GIG  +A++L  + GA V I          +A     LG     + 
Sbjct: 2   PMNGQVCVVTGASRGIGRGIALQL-CKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVV 60

Query: 68  CDISNEDEVINLVDTAVS-KFGKLDIMYNNAGILDRSF-----GSILDTPKSDLERLINV 121
           CD S E EV +L +     + G+LD++ NNA    ++       +  +TP S  + + NV
Sbjct: 61  CDSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNV 120

Query: 122 NTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAEL 181
              G +  + + AR+MVP  +G I+  +S    +  + +  Y + K     L    A EL
Sbjct: 121 GLRGHYFCSVYGARLMVPAGQGLIVVISSP-GSLQYMFNVPYGVGKAACDKLAADCAHEL 179

Query: 182 GQYGIRVNCVSPYGLATGMSMK-GGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLAS 240
            ++G+    + P  + T +  +    +  L +  + Q  +       T+      + LA+
Sbjct: 180 RRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFSSAETTELSGKCVVALAT 239

Query: 241 DE-SSYVSGQNLVV 253
           D     +SG+ L  
Sbjct: 240 DPNILSLSGKVLPS 253

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score =  179 bits (457), Expect = 2e-55
 Identities = 75/257 (29%), Positives = 113/257 (43%), Gaps = 24/257 (9%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLAD-------KLGQDVC 64
           RL+ + A++TGG SGIG  A   +   GA V I  +  +  E+ A        + G+   
Sbjct: 46  RLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAE--EEDAQQVKALIEECGRKAV 103

Query: 65  YIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTI 124
            +  D+S+E    +LV  A    G LDI+   AG    +   I D      ++   VN  
Sbjct: 104 LLPGDLSDESFARSLVHKAREALGGLDILALVAGKQ-TAIPEIKDLTSEQFQQTFAVNVF 162

Query: 125 GGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSP---AYTISKYGILGLVKCLAAEL 181
             F   + A  ++   +   I+ T+S     A   SP    Y  +K  IL   + LA ++
Sbjct: 163 ALFWITQEAIPLL--PKGASIITTSSI---QAYQPSPHLLDYAATKAAILNYSRGLAKQV 217

Query: 182 GQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQ--MGNLKGEFLKTDGIANAALYLA 239
            + GIRVN V+P  + T + + GG     I     Q  M    G+      +A   +YLA
Sbjct: 218 AEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRA-GQ---PAELAPVYVYLA 273

Query: 240 SDESSYVSGQNLVVDGG 256
           S ESSYV+ +   V GG
Sbjct: 274 SQESSYVTAEVHGVCGG 290

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score =  178 bits (453), Expect = 6e-55
 Identities = 77/265 (29%), Positives = 115/265 (43%), Gaps = 42/265 (15%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGED--------LADKLGQDV 63
           +L+GK  +ITGG SGIG      F + GA + IA     L E+          +K G   
Sbjct: 44  KLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAY----LDEEGDANETKQYVEKEGVKC 99

Query: 64  CYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNT 123
             +  D+S+E    ++V   V + G L+I+ NN          +       LE+   +N 
Sbjct: 100 VLLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQ-QYPQQGLEYITAEQLEKTFRINI 158

Query: 124 IGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSP---AYTISKYGILGLVKCLAAE 180
              F   K A   +  +Q   I+ TAS    +A  G+     Y+ +K  I+   + L+  
Sbjct: 159 FSYFHVTKAALSHL--KQGDVIINTAS---IVAYEGNETLIDYSATKGAIVAFTRSLSQS 213

Query: 181 LGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKT---------DGI 231
           L Q GIRVN V+P          G +   LI SS  +      +F              +
Sbjct: 214 LVQKGIRVNGVAP----------GPIWTPLIPSSFDE--KKVSQFGSNVPMQRPGQPYEL 261

Query: 232 ANAALYLASDESSYVSGQNLVVDGG 256
           A A +YLAS +SSYV+GQ + V+GG
Sbjct: 262 APAYVYLASSDSSYVTGQMIHVNGG 286

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score =  176 bits (449), Expect = 9e-55
 Identities = 53/263 (20%), Positives = 105/263 (39%), Gaps = 35/263 (13%)

Query: 16  KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDE 75
            + +I+G A+GIGA   ++    G ++V  D++D      A+        +  D+S  + 
Sbjct: 2   SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRD------AE--------VIADLSTAEG 47

Query: 76  VINLVDTAVSK-FGKLDIMYNNAGILDRS--FGSILDT----------------PKSDLE 116
               +   ++K    +D +   AG+  ++   G+++                   K    
Sbjct: 48  RKQAIADVLAKCSKGMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQP 107

Query: 117 RLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGL-GSPAYTISKYGILGLVK 175
             + ++++     A     + +  + G      +         G+ AY  SK  +   V+
Sbjct: 108 AAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVR 167

Query: 176 CLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAA 235
             AA  G+ G+R+N ++P    T +   G  DP   ES    +  + G   +   +A+  
Sbjct: 168 KRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPM-GRRAEPSEMASVI 226

Query: 236 LYLASDESSYVSGQNLVVDGGFS 258
            +L S  +SYV G  +V+DGG  
Sbjct: 227 AFLMSPAASYVHGAQIVIDGGID 249

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score =  174 bits (444), Expect = 2e-54
 Identities = 32/256 (12%), Positives = 77/256 (30%), Gaps = 24/256 (9%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDIS 71
             E +  ++ GG   +G+  V+ F      V   DV +      +  +           +
Sbjct: 4   SGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVKMTD-----SFT 58

Query: 72  NEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAK 131
            + + +      +    K+D +   AG       +   +   + + +   +     + + 
Sbjct: 59  EQADQVTAEVGKLLGDQKVDAILCVAGGWAG-GNAKSKSLFKNCDLMWKQSIWTSTISSH 117

Query: 132 HAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQ--YGIRVN 189
            A + +  ++ G +    +        G   Y ++K  +  L + LA +      G    
Sbjct: 118 LATKHL--KEGGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAI 175

Query: 190 CVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQ 249
            V P            +D  +   SM +       +   + +        +      SG 
Sbjct: 176 AVLP----------VTLDTPMNRKSMPEAD--FSSWTPLEFLVETFHDWITGNKRPNSGS 223

Query: 250 NLVV--DGGFSVVNPT 263
            + V    G + + P 
Sbjct: 224 LIQVVTTDGKTELTPA 239

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score =  173 bits (442), Expect = 8e-54
 Identities = 64/259 (24%), Positives = 119/259 (45%), Gaps = 27/259 (10%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDIS 71
            +   VA++TGGASG+G    +   + GA+VV+ D++   GED+   LG    +   D++
Sbjct: 6   EIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIR---GEDVVADLGDRARFAAADVT 62

Query: 72  NEDEVINLVDTAVSKFGKLDIMYNNAGILD--RSFGSILDTPKSDLERLINVNTIGGFLG 129
           +E  V + +D A    G L I+ N AG  +  R          +   +++++N +G F  
Sbjct: 63  DEAAVASALDLA-ETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNV 121

Query: 130 AKHAARVMV--------PQQKGCILFTASACTEIAGL----GSPAYTISKYGILGLVKCL 177
            + AA  +          +++G I+ TAS    +A      G  AY+ SK G++G+   +
Sbjct: 122 LRLAAERIAKTEPVGPNAEERGVIINTAS----VAAFDGQIGQAAYSASKGGVVGMTLPI 177

Query: 178 AAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALY 237
           A +L  + IRV  ++P    T +       P    +S+ +           D     A++
Sbjct: 178 ARDLASHRIRVMTIAPGLFDTPLLASL---PEEARASLGKQVPHPSRLGNPDEYGALAVH 234

Query: 238 LASDESSYVSGQNLVVDGG 256
           +   E+  ++G+ + +DG 
Sbjct: 235 II--ENPMLNGEVIRLDGA 251

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score =  175 bits (446), Expect = 1e-53
 Identities = 65/299 (21%), Positives = 106/299 (35%), Gaps = 47/299 (15%)

Query: 1   MNGPSSAAPFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVI-----ADVQDKLGEDL 55
                  +        VA++TG A  +G    E  H  G  V +     A   + L   L
Sbjct: 32  SGLVPRGSHMTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATL 91

Query: 56  ADKLGQDVCYIHCDISNE-----------------DEVINLVDTAVSKFGKLDIMYNNAG 98
             +       +  D+SN                       LV    + +G+ D++ NNA 
Sbjct: 92  NARRPNSAITVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNAS 151

Query: 99  I-----LDR-------SFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVP------Q 140
                 L R             +  ++    L   N I  +   K  A  +         
Sbjct: 152 SFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRG 211

Query: 141 QKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGM 200
               I+    A T    LG   YT++K  + GL +  A EL    IRVN V P     G+
Sbjct: 212 TNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGP-----GL 266

Query: 201 S-MKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFS 258
           S +   + PA+ E   S++  L         +++  ++L S ++ Y++G  + VDGG+S
Sbjct: 267 SVLVDDMPPAVWEGHRSKV-PLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS 324

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score =  174 bits (443), Expect = 1e-53
 Identities = 63/289 (21%), Positives = 103/289 (35%), Gaps = 47/289 (16%)

Query: 11  KRLEGKVAIITGGASGIGAMAVELFHENGAKVVI-----ADVQDKLGEDLADKLGQDVCY 65
                 VA++TG A  +G    E  H  G  V +     A   + L   L  +       
Sbjct: 5   TAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAIT 64

Query: 66  IHCDISNE-----------------DEVINLVDTAVSKFGKLDIMYNNAGIL-DRSFGSI 107
           +  D+SN                       LV    + +G+ D++ NNA           
Sbjct: 65  VQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRN 124

Query: 108 -----------LDTPKSDLERLINVNTIGGFLGAKHAARVMVP------QQKGCILFTAS 150
                       +  ++    L   N I  +   K  A  +             I+    
Sbjct: 125 DEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVD 184

Query: 151 ACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMS-MKGGVDPA 209
           A T    LG   YT++K  + GL +  A EL    IRVN V P     G+S +   + PA
Sbjct: 185 AMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGP-----GLSVLVDDMPPA 239

Query: 210 LIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFS 258
           + E   S++  L         +++  ++L S ++ Y++G  + VDGG+S
Sbjct: 240 VWEGHRSKV-PLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS 287

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score =  175 bits (445), Expect = 3e-53
 Identities = 69/283 (24%), Positives = 109/283 (38%), Gaps = 29/283 (10%)

Query: 2   NGPSSAAPFKRLEGKVAIITGGASGIG-AMAVELFHENGAKVVIADVQDKLGEDLAD--- 57
            G +      RL G    ITG + GIG A+A++   + GA +VIA    +    L     
Sbjct: 32  RGSAMLPNTGRLAGCTVFITGASRGIGKAIALKAAKD-GANIVIAAKTAQPHPKLLGTIY 90

Query: 58  -------KLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDT 110
                   +G        D+ +E ++   V+ A+ KFG +DI+ NNA  +     + LDT
Sbjct: 91  TAAEEIEAVGGKALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAIS--LTNTLDT 148

Query: 111 PKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGL--GSPAYTISKY 168
           P   L+ ++NVNT G +L +K     +   +   IL  +              AYTI+KY
Sbjct: 149 PTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQHCAYTIAKY 208

Query: 169 GILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKT 228
           G+   V  +A E     I VN + P       +M     P +                K 
Sbjct: 209 GMSMYVLGMAEEFK-GEIAVNALWPKTAIHTAAMDMLGGPGIESQCR-----------KV 256

Query: 229 DGIANAALYLASDESSYVSGQNLVVDGGFSVVNPTVMRAYGLI 271
           D IA+AA  +        +G  ++ +             Y + 
Sbjct: 257 DIIADAAYSIFQK-PKSFTGNFVIDENILKEEGIENFDVYAIK 298

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score =  171 bits (437), Expect = 7e-53
 Identities = 57/263 (21%), Positives = 101/263 (38%), Gaps = 24/263 (9%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLG----EDLADKLGQDVCYIH 67
               + A+IT G  G+G    E     G  V +    D       ++    + + + ++ 
Sbjct: 4   GRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQ 63

Query: 68  CDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGF 127
            D++ ++++  +V+ A+S FGK+D + NNAG        ++D  + +   +I  N    F
Sbjct: 64  ADVTKKEDLHKIVEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVF 123

Query: 128 LGAKHAARVMVPQQKGCILFTASACTEIAGL----GSPAYTISKYGILGLVKCLAAELGQ 183
              K    VM  Q  G I+                   A+  +K G++ L K +A E  +
Sbjct: 124 HLLKLVVPVMRKQNFGRIINYGF--QGADSAPGWIYRSAFAAAKVGLVSLTKTVAYEEAE 181

Query: 184 YGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQ-----MGNLKGEFLKTDGIANAALYL 238
           YGI  N V P  +     MK        +           G         + IA    +L
Sbjct: 182 YGITANMVCPGDIIG--EMKEATIQEARQLKEHNTPIGRSG-------TGEDIARTISFL 232

Query: 239 ASDESSYVSGQNLVVDGGFSVVN 261
             D+S  ++G  + V G   V++
Sbjct: 233 CEDDSDMITGTIIEVTGAVDVIH 255

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score =  170 bits (434), Expect = 2e-52
 Identities = 59/261 (22%), Positives = 113/261 (43%), Gaps = 24/261 (9%)

Query: 13  LEGKVAIITGGASGIG-AMAVELFHENGAKVVIADVQDKLGEDLADKL-----GQDVCYI 66
           L+GK A++TG  +GIG A+A  L    GA V+I   +++   +   ++        +  +
Sbjct: 8   LKGKTALVTGSTAGIGKAIATSL-VAEGANVLINGRREENVNETIKEIRAQYPDAILQPV 66

Query: 67  HCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGG 126
             D+  E    ++++    K+ K+DI+ NN GI         D P  D  +L  VN + G
Sbjct: 67  VADLGTEQGCQDVIE----KYPKVDILINNLGIF--EPVEYFDIPDEDWFKLFEVNIMSG 120

Query: 127 FLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGI 186
               +   + M+ +++G ++F AS    +       Y+ +K   L L + LA       +
Sbjct: 121 VRLTRSYLKKMIERKEGRVIFIASEAAIMPSQEMAHYSATKTMQLSLSRSLAELTTGTNV 180

Query: 187 RVNCVSP--------YGLATGMSMKGGVDPALIESSM---SQMGNLKGEFLKTDGIANAA 235
            VN + P          +   +     +     E      ++  ++    ++ + IA+  
Sbjct: 181 TVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRPEEIAHLV 240

Query: 236 LYLASDESSYVSGQNLVVDGG 256
            +L+S  SS ++G  L +DGG
Sbjct: 241 TFLSSPLSSAINGSALRIDGG 261

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score =  169 bits (431), Expect = 8e-52
 Identities = 64/267 (23%), Positives = 110/267 (41%), Gaps = 22/267 (8%)

Query: 6   SAAPFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQD 62
             +     + +VA++TG  SGIG        + G +V +    ++       +L   G +
Sbjct: 13  RGSHMATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVE 72

Query: 63  VCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVN 122
                CD+ +  E+  LV   V ++G +D++ NNAG      G+  +        ++  N
Sbjct: 73  ADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRP-GG-GATAELADELWLDVVETN 130

Query: 123 TIGGFLGAKHAARV--MVPQQKGCILFTASACTEIAGL----GSPAYTISKYGILGLVKC 176
             G F   K   +   M+ +  G I+  AS      G      +  Y+ SK+G++G  K 
Sbjct: 131 LTGVFRVTKQVLKAGGMLERGTGRIVNIAS----TGGKQGVVHAAPYSASKHGVVGFTKA 186

Query: 177 LAAELGQYGIRVNCVSPYGLATGM--SMKGGVDPALIESSMSQMGNLK-----GEFLKTD 229
           L  EL + GI VN V P  + T M  S++         S+      +      G +++  
Sbjct: 187 LGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPS 246

Query: 230 GIANAALYLASDESSYVSGQNLVVDGG 256
            +A    YL    ++ V+ Q L V GG
Sbjct: 247 EVAEMVAYLIGPGAAAVTAQALNVCGG 273

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score =  170 bits (433), Expect = 1e-51
 Identities = 57/250 (22%), Positives = 104/250 (41%), Gaps = 29/250 (11%)

Query: 11  KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL-----GQDVCY 65
           K   G+ A +TGGA+G+G   V      G KV IAD++    +     L     G +V  
Sbjct: 4   KDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMG 63

Query: 66  IHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIG 125
           +  D+++ +      D   ++FG + I+ NNAG+    F  I ++   D + L+ VN  G
Sbjct: 64  VQLDVASREGFKMAADEVEARFGPVSILCNNAGVN--LFQPIEESSYDDWDWLLGVNLHG 121

Query: 126 GFLGAKHAARVMV------PQQKGCILFTASACTEIAGL----GSPAYTISKYGILGLVK 175
              G       MV       Q+ G ++ TAS    +A          Y  +K+ + GL +
Sbjct: 122 VVNGVTTFVPRMVERVKAGEQKGGHVVNTAS----MAAFLAAGSPGIYNTTKFAVRGLSE 177

Query: 176 CLAAELGQYGIRVNCVSPYGLATGM--------SMKGGVDPALIESSMSQMGNLKGEFLK 227
            L   L +Y I V+ + P  + + +            G    + ++++ ++  +    ++
Sbjct: 178 SLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGVHEFGME 237

Query: 228 TDGIANAALY 237
            D I    + 
Sbjct: 238 PDVIGARVIE 247

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score =  168 bits (429), Expect = 1e-51
 Identities = 52/196 (26%), Positives = 86/196 (43%), Gaps = 8/196 (4%)

Query: 11  KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLAD---KLGQDVCYIH 67
           K + G++ +ITG   GIG +    F +  +K+V+ D+     E+ A     LG  V    
Sbjct: 27  KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFV 86

Query: 68  CDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGF 127
            D SN +++ +      ++ G + I+ NNAG++      +  T    +E+   VN +  F
Sbjct: 87  VDCSNREDIYSSAKKVKAEIGDVSILVNNAGVV--YTSDLFATQDPQIEKTFEVNVLAHF 144

Query: 128 LGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQY--- 184
              K     M     G I+  ASA   ++     AY  SK+  +G  K L  EL      
Sbjct: 145 WTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQIT 204

Query: 185 GIRVNCVSPYGLATGM 200
           G++  C+ P  + TG 
Sbjct: 205 GVKTTCLCPNFVNTGF 220

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score =  168 bits (428), Expect = 3e-51
 Identities = 68/269 (25%), Positives = 129/269 (47%), Gaps = 29/269 (10%)

Query: 1   MNGPSSAAPFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL- 59
           ++       +   E KVA++TG   GIG    ++  ++ + V+      K  + + D++ 
Sbjct: 30  LSENKKENYYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIK 89

Query: 60  --GQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGIL-DRSFGSILDTPKSDLE 116
             G +      D+S ++E+  +++  +++   +DI+ NNAGI  D      L     + E
Sbjct: 90  SFGYESSGYAGDVSKKEEISEVINKILTEHKNVDILVNNAGITRD---NLFLRMKNDEWE 146

Query: 117 RLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGL----GSPAYTISKYGILG 172
            ++  N    F   +  ++ M+  + G I+  +S    I GL    G   Y+ SK G++G
Sbjct: 147 DVLRTNLNSLFYITQPISKRMINNRYGRIINISS----IVGLTGNVGQANYSSSKAGVIG 202

Query: 173 LVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQ-----MGNLKGEFLK 227
             K LA EL    I VN ++P  +++ M+ K  +   + ++ +S      MG        
Sbjct: 203 FTKSLAKELASRNITVNAIAPGFISSDMTDK--ISEQIKKNIISNIPAGRMG-------T 253

Query: 228 TDGIANAALYLASDESSYVSGQNLVVDGG 256
            + +AN A +L+SD+S Y++G+  V+DGG
Sbjct: 254 PEEVANLACFLSSDKSGYINGRVFVIDGG 282

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score =  166 bits (424), Expect = 4e-51
 Identities = 59/258 (22%), Positives = 103/258 (39%), Gaps = 34/258 (13%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADV-QDKLGEDLADKL------GQDVC 64
             +  +AIITG + GIGA+       +G +VV+    +  L E + D++       Q+  
Sbjct: 4   EKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNL-EKVHDEIMRSNKHVQEPI 62

Query: 65  YIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGI-LDRSFGSILDTPKSDLERLINVNT 123
            +  DI++  +    +     K+G +DI+ N A + +D      L  P  +  +++ +N 
Sbjct: 63  VLPLDITDCTKADTEIKDIHQKYGAVDILVNAAAMFMD----GSLSEPVDNFRKIMEINV 118

Query: 124 IGGFLGAKHAARVMVPQQKGCILFTASACTEIAGL----GSPAYTISKYGILGLVKCLAA 179
           I  +   K    +M  Q+ G I   AS     A          Y  +K+ +LGL + L  
Sbjct: 119 IAQYGILKTVTEIMKVQKNGYIFNVAS----RAAKYGFADGGIYGSTKFALLGLAESLYR 174

Query: 180 ELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLA 239
           EL   GIRV  + P  + T M+ K G                  E ++ D + N    L 
Sbjct: 175 ELAPLGIRVTTLCPGWVNTDMAKKAGTPFK------------DEEMIQPDDLLNTIRCLL 222

Query: 240 SD-ESSYVSGQNLVVDGG 256
           +  E+  +      +   
Sbjct: 223 NLSENVCIKDIVFEMKKS 240

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score =  166 bits (423), Expect = 5e-51
 Identities = 71/254 (27%), Positives = 128/254 (50%), Gaps = 26/254 (10%)

Query: 13  LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISN 72
           LEGKVA++TG + GIG    EL  E GAKV+     +   + ++D LG +   +  +++N
Sbjct: 7   LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTN 66

Query: 73  EDEVINLVDTAVSKFGKLDIMYNNAGI-LDRSFGSILDTPKSDLERLINVNTIGGFLGAK 131
            + +  ++     +FG +DI+ NNAGI  D     ++   + +   ++  N    F  +K
Sbjct: 67  PESIEAVLKAITDEFGGVDILVNNAGITRD---NLLMRMKEEEWSDIMETNLTSIFRLSK 123

Query: 132 HAARVMVPQQKGCILFTASACTEIAGL----GSPAYTISKYGILGLVKCLAAELGQYGIR 187
              R M+ +++G I+   S    + G     G   Y  +K G++G  K +A E+   G+ 
Sbjct: 124 AVLRGMMKKRQGRIINVGS----VVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVT 179

Query: 188 VNCVSPYGLATGMSMKGGVDPALIESSMSQ-----MGNLKGEFLKTDGIANAALYLASDE 242
           VN V+P  + T M+    ++     ++++Q     +G           IA+A  +LAS E
Sbjct: 180 VNTVAPGFIETDMTKA--LNDEQRTATLAQVPAGRLG-------DPREIASAVAFLASPE 230

Query: 243 SSYVSGQNLVVDGG 256
           ++Y++G+ L V+GG
Sbjct: 231 AAYITGETLHVNGG 244

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score =  167 bits (425), Expect = 6e-51
 Identities = 71/261 (27%), Positives = 104/261 (39%), Gaps = 24/261 (9%)

Query: 13  LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCD 69
              + A +TG +SGIG          G  V       K      D L   G DV    CD
Sbjct: 22  SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCD 81

Query: 70  ISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLG 129
           +++ DEV   V  AV +FG + I+ N+AG      G   D   +    +++ N  G F  
Sbjct: 82  VTSTDEVHAAVAAAVERFGPIGILVNSAGRN--GGGETADLDDALWADVLDTNLTGVFRV 139

Query: 130 AKHAARV--MVPQQKGCILFTASACTEIAGL-GSP---AYTISKYGILGLVKCLAAELGQ 183
            +   R   M     G I+  AS      G  G      YT SK+G++G  K +  EL +
Sbjct: 140 TREVLRAGGMREAGWGRIVNIAS----TGGKQGVMYAAPYTASKHGVVGFTKSVGFELAK 195

Query: 184 YGIRVNCVSP--------YGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAA 235
            GI VN V P          +  G +   GV    +    +    L G +   + +A   
Sbjct: 196 TGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPL-GRYSTPEEVAGLV 254

Query: 236 LYLASDESSYVSGQNLVVDGG 256
            YL +D ++ ++ Q L V GG
Sbjct: 255 GYLVTDAAASITAQALNVCGG 275

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score =  164 bits (418), Expect = 2e-50
 Identities = 41/249 (16%), Positives = 85/249 (34%), Gaps = 27/249 (10%)

Query: 13  LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISN 72
           +     I+ GG   +G+  +E F +NG  V+  D+      D AD        +  + + 
Sbjct: 1   MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSA---NDQAD----SNILVDGNKNW 53

Query: 73  EDEVINLVDTAVS--KFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGA 130
            ++  ++++   S  +  ++D ++  AG       +       + + +I  +     + A
Sbjct: 54  TEQEQSILEQTASSLQGSQVDGVFCVAGGW-AGGSASSKDFVKNADLMIKQSVWSSAIAA 112

Query: 131 KHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQY--GIRV 188
           K A   +  +  G +  T +A           Y ++K  +  L   LAA+         V
Sbjct: 113 KLATTHL--KPGGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAV 170

Query: 189 NCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSY-VS 247
             + P            +D  +    M         +     I+   L   ++ SS   S
Sbjct: 171 LTIMP----------VTLDTPMNRKWMPNAD--HSSWTPLSFISEHLLKWTTETSSRPSS 218

Query: 248 GQNLVVDGG 256
           G  L +   
Sbjct: 219 GALLKITTE 227

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score =  165 bits (420), Expect = 2e-50
 Identities = 72/249 (28%), Positives = 123/249 (49%), Gaps = 12/249 (4%)

Query: 11  KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDI 70
            +L G+ A++TG   GIG      FH  GA V +   ++   +++A  LG+DV     ++
Sbjct: 23  FKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANL 82

Query: 71  SNEDEVINLVDTAVSKFGKLDIMYNNAGI-LDRSFGSILDTPKSDLERLINVNTIGGFLG 129
           S+   +  L + A  +   +DI+ NNAGI  D   G  +     D + ++ VN       
Sbjct: 83  SDRKSIKQLAEVAEREMEGIDILVNNAGITRD---GLFVRMQDQDWDDVLAVNLTAASTL 139

Query: 130 AKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVN 189
            +     M+ ++ G I+   S    +   G   Y  +K G++G  K LA E+    I VN
Sbjct: 140 TRELIHSMMRRRYGRIINITSIVGVVGNPGQTNYCAAKAGLIGFSKALAQEIASRNITVN 199

Query: 190 CVSPYGLATGMSMKGGVDPALIESSMSQ--MGNLKGEFLKTDGIANAALYLASDESSYVS 247
           C++P  + + M+ K  ++    E+ M+   M  + G     + IA A +YLASDE++Y++
Sbjct: 200 CIAPGFIKSAMTDK--LNEKQKEAIMAMIPMKRM-GI---GEEIAFATVYLASDEAAYLT 253

Query: 248 GQNLVVDGG 256
           GQ L ++GG
Sbjct: 254 GQTLHINGG 262

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score =  164 bits (418), Expect = 2e-50
 Identities = 56/251 (22%), Positives = 96/251 (38%), Gaps = 33/251 (13%)

Query: 16  KVAIITGGASGIGAMAVELFHENGAK-------VVIADVQDKLGEDLADKL---GQDVCY 65
            + +ITG   GIG      F             +V++       E ++ +    G     
Sbjct: 3   HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDT 62

Query: 66  IHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIG 125
           I  DIS+  +V  L    V ++G +D + NNAG+    FG++ D  + D +  +N N  G
Sbjct: 63  ITADISDMADVRRLTTHIVERYGHIDCLVNNAGVG--RFGALSDLTEEDFDYTMNTNLKG 120

Query: 126 GFLGAKHAARVMVPQQKGCILFTASACTEIAGL----GSPAYTISKYGILGLVKCLAAEL 181
            F   +    +M  Q  G I F  S    +A       S  Y +SK+G  GLV+ +    
Sbjct: 121 TFFLTQALFALMERQHSGHIFFITS----VAATKAFRHSSIYCMSKFGQRGLVETMRLYA 176

Query: 182 GQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASD 241
            +  +R+  V P  + T M  K   +             ++   +  + IA   +     
Sbjct: 177 RKCNVRITDVQPGAVYTPMWGKVDDE-------------MQALMMMPEDIAAPVVQAYLQ 223

Query: 242 ESSYVSGQNLV 252
            S  V  + ++
Sbjct: 224 PSRTVVEEIIL 234

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255

 Score =  163 bits (416), Expect = 7e-50
 Identities = 77/262 (29%), Positives = 127/262 (48%), Gaps = 28/262 (10%)

Query: 11  KRLEGKVAIITGGASGIG-AMAVELFHENGAKVVIADVQDKLGEDLADKL-------GQD 62
             L+GKVA++TG + GIG A+A  L ++ GA V I     K   + A++        G  
Sbjct: 3   SMLKGKVALVTGASRGIGRAIAKRLAND-GALVAIHYGNRK---EEAEETVYEIQSNGGS 58

Query: 63  VCYIHCDISNEDEVINLVDTAVSKF------GKLDIMYNNAGILDRSFGSILDTPKSDLE 116
              I  ++ +   V  L  +  ++        K DI+ NNAGI       I +T +   +
Sbjct: 59  AFSIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIG--PGAFIEETTEQFFD 116

Query: 117 RLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKC 176
           R+++VN    F   + A   +  +    I+  +SA T I+     AY+++K  I  +   
Sbjct: 117 RMVSVNAKAPFFIIQQALSRL--RDNSRIINISSAATRISLPDFIAYSMTKGAINTMTFT 174

Query: 177 LAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIE--SSMSQMGNLKGEFLKTDGIANA 234
           LA +LG  GI VN + P  + T M+ +   DP + +  +++S    L GE    + IA+ 
Sbjct: 175 LAKQLGARGITVNAILPGFVKTDMNAELLSDPMMKQYATTISAFNRL-GE---VEDIADT 230

Query: 235 ALYLASDESSYVSGQNLVVDGG 256
           A +LAS +S +V+GQ + V GG
Sbjct: 231 AAFLASPDSRWVTGQLIDVSGG 252

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score =  162 bits (413), Expect = 2e-49
 Identities = 78/257 (30%), Positives = 129/257 (50%), Gaps = 26/257 (10%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVI-----ADVQDKLGEDLADKLGQDVCYI 66
           +L+GK AI+TG + G+G          GA +V+     +   D   E+     G +V   
Sbjct: 2   QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKA-AGINVVVA 60

Query: 67  HCDISNEDEVINLVDTAVSKFGKLDIMYNNAGIL-DRSFGSILDTPKSDLERLINVNTIG 125
             D+ N ++V N+V TA+  FG++DI+ NNAGI  D     +L   + D + ++N N   
Sbjct: 61  KGDVKNPEDVENMVKTAMDAFGRIDILVNNAGITRD---TLMLKMSEKDWDDVLNTNLKS 117

Query: 126 GFLGAKHAARVMVPQQKGCILFTASACTEIAGL----GSPAYTISKYGILGLVKCLAAEL 181
            +L  K  +++M+ Q+ G I+   S    IAG+    G   Y  SK G++G  K +A E 
Sbjct: 118 AYLCTKAVSKIMLKQKSGKIINITS----IAGIIGNAGQANYAASKAGLIGFTKSIAKEF 173

Query: 182 GQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQ--MGNLKGEFLKTDGIANAALYLA 239
              GI  N V+P  + T M+    +   + E  ++   +    G     + +AN   +LA
Sbjct: 174 AAKGIYCNAVAPGIIKTDMTDV--LPDKVKEMYLNNIPLKRF-GT---PEEVANVVGFLA 227

Query: 240 SDESSYVSGQNLVVDGG 256
           SD+S+Y++GQ + +DGG
Sbjct: 228 SDDSNYITGQVINIDGG 244

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score =  162 bits (412), Expect = 5e-49
 Identities = 68/259 (26%), Positives = 118/259 (45%), Gaps = 29/259 (11%)

Query: 11  KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIH 67
           K L+ +VAI+TG + GIG          GA V+     +   E +       G +     
Sbjct: 24  KTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAV 83

Query: 68  CDISNEDEVINLVDTAVSKFGKLDIMYNNAGI-LDRSFGSILDTPKSDLERLINVNTIGG 126
            ++++   V  LV++ + +FG L+++ NNAGI  D      +     + + +I+ N    
Sbjct: 84  LNVNDATAVDALVESTLKEFGALNVLVNNAGITQD---QLAMRMKDDEWDAVIDTNLKAV 140

Query: 127 FLGAKHAARVMVPQQKGCILFTASACTEIAGL----GSPAYTISKYGILGLVKCLAAELG 182
           F  ++   R M+  + G I+   S    + G     G   Y  +K G+ G+ + LA E+G
Sbjct: 141 FRLSRAVLRPMMKARGGRIVNITS----VVGSAGNPGQVNYAAAKAGVAGMTRALAREIG 196

Query: 183 QYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQ-----MGNLKGEFLKTDGIANAALY 237
             GI VNCV+P  + T M+    +      +  +Q     +G         + IA+A  +
Sbjct: 197 SRGITVNCVAPGFIDTDMTKG--LPQEQQTALKTQIPLGRLG-------SPEDIAHAVAF 247

Query: 238 LASDESSYVSGQNLVVDGG 256
           LAS ++ Y++G  L V+GG
Sbjct: 248 LASPQAGYITGTTLHVNGG 266

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score =  161 bits (411), Expect = 5e-49
 Identities = 63/258 (24%), Positives = 115/258 (44%), Gaps = 19/258 (7%)

Query: 13  LEGKVAIITGGASGIG-AMAVELFHENGAKVVIADVQDKLGEDLADKL-----GQDVCYI 66
           ++GK+A++T G+SG+G A A+EL   NGA++++     +  E  A ++     G  V  +
Sbjct: 5   IQGKLAVVTAGSSGLGFASALEL-ARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIV 63

Query: 67  HCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGG 126
             DI    ++  L +      G  DI+  + G      G  ++    D +    +     
Sbjct: 64  AGDIREPGDIDRLFE-KARDLGGADILVYSTGGP--RPGRFMELGVEDWDESYRLLARSA 120

Query: 127 FLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGI 186
               + AA  MV +  G +++  S              I +  ++G+V+ LA EL  +G+
Sbjct: 121 VWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIMRLPVIGVVRTLALELAPHGV 180

Query: 187 RVNCVSP--------YGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYL 238
            VN V P          LA   + + G+       SM+      G   K + +A+   +L
Sbjct: 181 TVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMAS-RIPMGRVGKPEELASVVAFL 239

Query: 239 ASDESSYVSGQNLVVDGG 256
           AS+++S+++G  + VDGG
Sbjct: 240 ASEKASFITGAVIPVDGG 257

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score =  161 bits (409), Expect = 8e-49
 Identities = 71/257 (27%), Positives = 125/257 (48%), Gaps = 24/257 (9%)

Query: 11  KRLEGKVAIITGGASGIGAMAVELFHENGAKVVI----ADVQDKLGEDLADKLGQDVCYI 66
            +L+GKV+++TG   GIG    E     G+ V+I     +    + E++A+K G     +
Sbjct: 3   IKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGV 62

Query: 67  HCDISNEDEVINLVDTAVSKFGKLDIMYNNAGIL-DRSFGSILDTPKSDLERLINVNTIG 125
             ++ +E+ +    +   +    +DI+ NNAGI  D      L     D E ++ VN  G
Sbjct: 63  EMNLLSEESINKAFEEIYNLVDGIDILVNNAGITRD---KLFLRMSLLDWEEVLKVNLTG 119

Query: 126 GFLGAKHAARVMVPQQKGCILFTASACTEIAGL----GSPAYTISKYGILGLVKCLAAEL 181
            FL  +++ R M+ Q+ G I+  +S    + G     G   Y+ +K G++G  K LA EL
Sbjct: 120 TFLVTQNSLRKMIKQRWGRIVNISS----VVGFTGNVGQVNYSTTKAGLIGFTKSLAKEL 175

Query: 182 GQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQ--MGNLKGEFLKTDGIANAALYLA 239
               + VN V+P  + T M+    +   + +    Q  +G   G     + +AN  L+L 
Sbjct: 176 APRNVLVNAVAPGFIETDMTAV--LSEEIKQKYKEQIPLGRF-GS---PEEVANVVLFLC 229

Query: 240 SDESSYVSGQNLVVDGG 256
           S+ +SY++G+ + V+GG
Sbjct: 230 SELASYITGEVIHVNGG 246

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score =  161 bits (409), Expect = 1e-48
 Identities = 75/265 (28%), Positives = 123/265 (46%), Gaps = 32/265 (12%)

Query: 11  KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQ--------- 61
            RL   +A++TG  SGIG          GA V   D+     ++    LG          
Sbjct: 3   NRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPR 62

Query: 62  -DVCYIHCDISNEDEVINLVDTAVSKFGK-LDIMYNNAGIL-DRSFGSILDTPKSDLERL 118
            +      D+S       L++   + F +   ++ + AGI  D     +L   + D +++
Sbjct: 63  GNHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQD---EFLLHMSEDDWDKV 119

Query: 119 INVNTIGGFLGAKHAARVMVPQ-QKGCILFTASACTEIAGL----GSPAYTISKYGILGL 173
           I VN  G FL  + AA+ +V    +G I+  +S    I G     G   Y  SK G++GL
Sbjct: 120 IAVNLKGTFLVTQAAAQALVSNGCRGSIINISS----IVGKVGNVGQTNYAASKAGVIGL 175

Query: 174 VKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQ--MGNLKGEFLKTDGI 231
            +  A ELG++GIR N V P  +AT M+ K  V   +++       MG+L G+    + +
Sbjct: 176 TQTAARELGRHGIRCNSVLPGFIATPMTQK--VPQKVVDKITEMIPMGHL-GD---PEDV 229

Query: 232 ANAALYLASDESSYVSGQNLVVDGG 256
           A+   +LAS++S Y++G ++ V GG
Sbjct: 230 ADVVAFLASEDSGYITGTSVEVTGG 254

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score =  159 bits (406), Expect = 2e-48
 Identities = 71/250 (28%), Positives = 113/250 (45%), Gaps = 15/250 (6%)

Query: 13  LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCD 69
           L  KVA++TG + GIG          GA VV         E   + +   G     +  +
Sbjct: 3   LNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLN 62

Query: 70  ISNEDEVINLVDTAVSKFGKLDIMYNNAGI-LDRSFGSILDTPKSDLERLINVNTIGGFL 128
           IS+ + + N      ++   +DI+ NNAGI  D     ++   + + + +IN N    F 
Sbjct: 63  ISDIESIQNFFAEIKAENLAIDILVNNAGITRD---NLMMRMSEDEWQSVINTNLSSIFR 119

Query: 129 GAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRV 188
            +K   R M+ ++ G I+   S        G   Y  +K G++G  K LA E+    I V
Sbjct: 120 MSKECVRGMMKKRWGRIISIGSVVGSAGNPGQTNYCAAKAGVIGFSKSLAYEVASRNITV 179

Query: 189 NCVSPYGLATGMSMKGGVDPALIESSMSQ--MGNLKGEFLKTDGIANAALYLASDESSYV 246
           N V+P  +AT M+ K  +         ++   G + GE      IA A  +LAS+E+ Y+
Sbjct: 180 NVVAPGFIATDMTDK--LTDEQKSFIATKIPSGQI-GE---PKDIAAAVAFLASEEAKYI 233

Query: 247 SGQNLVVDGG 256
           +GQ L V+GG
Sbjct: 234 TGQTLHVNGG 243

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322

 Score =  161 bits (410), Expect = 3e-48
 Identities = 74/279 (26%), Positives = 122/279 (43%), Gaps = 39/279 (13%)

Query: 2   NGPSSAAPFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADV------QDKLGEDL 55
                      ++G+V I+TG   GIG      F   GA+VV+ D+          G   
Sbjct: 14  AQTQGPGSMGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSA 73

Query: 56  ADK-------LGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGIL-DRSFGSI 107
           A          G +      ++++ D+   L+ TAV  FG LD++ NNAGI+ DR   + 
Sbjct: 74  AQSVVDEITAAGGEAVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANT 133

Query: 108 LDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQK------GCILFTASACTEIAGL--- 158
            +    + + +I V+  G F   +HAA       K      G I+ T+S     AGL   
Sbjct: 134 SE---EEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSG----AGLQGS 186

Query: 159 -GSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQ 217
            G   Y+ +K GI  L    AAE+G+YG+ VN ++P    T M+    V   ++ +    
Sbjct: 187 VGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAP-SARTRMT--ETVFAEMMATQDQD 243

Query: 218 MGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGG 256
                 + +  + ++   ++L S E+  V+G+   V+GG
Sbjct: 244 -----FDAMAPENVSPLVVWLGSAEARDVTGKVFEVEGG 277

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score =  159 bits (404), Expect = 4e-48
 Identities = 82/258 (31%), Positives = 131/258 (50%), Gaps = 30/258 (11%)

Query: 13  LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLG-EDLADKL---GQDVCYIHC 68
           L+GKVA++TG + GIG        + GA VV+    ++    ++ D++   G D   +  
Sbjct: 2   LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRA 61

Query: 69  DISNEDEVINLVDTAVSKFGKLDIMYNNAGIL-DRSFGSILDTPKSDLERLINVNTIGGF 127
           D++N ++V N+V   V  FG++DI+ NNAG+  D     ++   + + + +IN N  G F
Sbjct: 62  DVANAEDVTNMVKQTVDVFGQVDILVNNAGVTKD---NLLMRMKEEEWDTVINTNLKGVF 118

Query: 128 LGAKHAARVMVPQQKGCILFTASACTEIAGL----GSPAYTISKYGILGLVKCLAAELGQ 183
           L  K  +R M+ Q+ G I+  AS    + G+    G   Y  +K G++GL K  A EL  
Sbjct: 119 LCTKAVSRFMMRQRHGRIVNIAS----VVGVTGNPGQANYVAAKAGVIGLTKTSAKELAS 174

Query: 184 YGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQ-----MGNLKGEFLKTDGIANAALYL 238
             I VN ++P  +AT M+    +D  +    +        G       +   IANA  + 
Sbjct: 175 RNITVNAIAPGFIATDMTDV--LDENIKAEMLKLIPAAQFG-------EAQDIANAVTFF 225

Query: 239 ASDESSYVSGQNLVVDGG 256
           ASD+S Y++GQ L VDGG
Sbjct: 226 ASDQSKYITGQTLNVDGG 243

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score =  158 bits (402), Expect = 6e-48
 Identities = 64/249 (25%), Positives = 110/249 (44%), Gaps = 23/249 (9%)

Query: 16  KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDE 75
           + A++TGGASG+G  A       G +VV+ D++           G+D+ Y+  D++ E++
Sbjct: 3   RSALVTGGASGLGRAAALALKARGYRVVVLDLRR---------EGEDLIYVEGDVTREED 53

Query: 76  VINLVDTAVSKFGKLDIMYNNAGILD--RSFGSILDTPKSDLERLINVNTIGGFLGAKHA 133
           V   V  A  +   L  + + AG+    +  G           R++ VN +G F   + A
Sbjct: 54  VRRAVARAQ-EEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLA 112

Query: 134 ARVMVPQ------QKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIR 187
           A  M         Q+G I+ TAS       +G  AY  SK G++ L    A EL  +GIR
Sbjct: 113 AWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELAGWGIR 172

Query: 188 VNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVS 247
           V  V+P    T +       P   ++S++          + +  A   L++   E+  ++
Sbjct: 173 VVTVAPGLFDTPLLQGL---PEKAKASLAAQVPFPPRLGRPEEYAALVLHIL--ENPMLN 227

Query: 248 GQNLVVDGG 256
           G+ + +DG 
Sbjct: 228 GEVVRLDGA 236

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score =  158 bits (401), Expect = 1e-47
 Identities = 75/255 (29%), Positives = 124/255 (48%), Gaps = 24/255 (9%)

Query: 13  LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLG-EDLADKL---GQDVCYIHC 68
              K A++TG + GIG        E G  V +     K   E + +++   G D   I  
Sbjct: 2   KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQA 61

Query: 69  DISNEDEVINLVDTAVSKFGKLDIMYNNAGIL-DRSFGSILDTPKSDLERLINVNTIGGF 127
           ++++ DEV  ++   VS+FG LD++ NNAGI  D     ++   + + + +I+ N  G F
Sbjct: 62  NVADADEVKAMIKEVVSQFGSLDVLVNNAGITRD---NLLMRMKEQEWDDVIDTNLKGVF 118

Query: 128 LGAKHAARVMVPQQKGCILFTASACTEIAGL----GSPAYTISKYGILGLVKCLAAELGQ 183
              + A   M+ Q+ G I+  +S    + G     G   Y  +K G++GL K  A EL  
Sbjct: 119 NCIQKATPQMLRQRSGAIINLSS----VVGAVGNPGQANYVATKAGVIGLTKSAARELAS 174

Query: 184 YGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQ--MGNLKGEFLKTDGIANAALYLASD 241
            GI VN V+P  + + M+    +   L E  ++Q  +    G+      IAN   +LASD
Sbjct: 175 RGITVNAVAPGFIVSDMTDA--LSDELKEQMLTQIPLARF-GQ---DTDIANTVAFLASD 228

Query: 242 ESSYVSGQNLVVDGG 256
           ++ Y++GQ + V+GG
Sbjct: 229 KAKYITGQTIHVNGG 243

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score =  156 bits (396), Expect = 6e-47
 Identities = 74/247 (29%), Positives = 131/247 (53%), Gaps = 16/247 (6%)

Query: 13  LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISN 72
           L GK ++ITG +SGIG+    L H+ G+KV+I+   ++  + L + L  +     C+++N
Sbjct: 12  LTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLAN 71

Query: 73  EDEVINLVDTAVSKFGKLDIMYNNAGI-LDRSFGSILDTPKSDLERLINVNTIGGFLGAK 131
           ++E  NL+     K   LDI+  NAGI  D      +     D +++I++N    F+  +
Sbjct: 72  KEECSNLIS----KTSNLDILVCNAGITSD---TLAIRMKDQDFDKVIDINLKANFILNR 124

Query: 132 HAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCV 191
            A + M+ ++ G I+  +S        G   Y  SK G++G+ K L+ E+   GI VN V
Sbjct: 125 EAIKKMIQKRYGRIINISSIVGIAGNPGQANYCASKAGLIGMTKSLSYEVATRGITVNAV 184

Query: 192 SPYGLATGMSMKGGVDPALIESSMSQ--MGNLKGEFLKTDGIANAALYLASDESSYVSGQ 249
           +P  + + M+ K  ++    E+ + +  +G   G     + +A A  +LAS+ +SY++GQ
Sbjct: 185 APGFIKSDMTDK--LNEKQREAIVQKIPLGTY-GI---PEDVAYAVAFLASNNASYITGQ 238

Query: 250 NLVVDGG 256
            L V+GG
Sbjct: 239 TLHVNGG 245

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score =  155 bits (394), Expect = 1e-46
 Identities = 66/254 (25%), Positives = 113/254 (44%), Gaps = 27/254 (10%)

Query: 16  KVAIITGGASGIGAMAVELFHENGAKVVI-----ADVQDKLGEDLADKLGQDVCYIHCDI 70
           + A+ITG + GIG        E+G  + I      +  +++ E+   +    V  +  ++
Sbjct: 2   RKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANL 61

Query: 71  SNEDEVINLVDTAVSKFGKLDIMYNNAGIL-DRSFGSILDTPKSDLERLINVNTIGGFLG 129
              +    LV  A    G LD + NNAGI  D     ++     D E ++  N    F  
Sbjct: 62  LEAEAATALVHQAAEVLGGLDTLVNNAGITRD---TLLVRMKDEDWEAVLEANLSAVFRT 118

Query: 130 AKHAARVMVPQQKGCILFTASACTEIAGL----GSPAYTISKYGILGLVKCLAAELGQYG 185
            + A ++M+  + G I+   S    + G+    G   Y  SK G++G  + +A E  Q G
Sbjct: 119 TREAVKLMMKARFGRIVNITS----VVGILGNPGQANYVASKAGLIGFTRAVAKEYAQRG 174

Query: 186 IRVNCVSPYGLATGM--SMKGGVDPALIES-SMSQMGNLKGEFLKTDGIANAALYLASDE 242
           I VN V+P  + T M   +   V  A ++     + G       + + +A A  +L S++
Sbjct: 175 ITVNAVAPGFIETEMTERLPQEVKEAYLKQIPAGRFG-------RPEEVAEAVAFLVSEK 227

Query: 243 SSYVSGQNLVVDGG 256
           + Y++GQ L VDGG
Sbjct: 228 AGYITGQTLCVDGG 241

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score =  156 bits (397), Expect = 1e-46
 Identities = 42/201 (20%), Positives = 78/201 (38%), Gaps = 13/201 (6%)

Query: 11  KRLEGKVAIITGGASGIG-AMAVELFHENGAKVVIADV-QDKLGEDLADKL----GQDVC 64
           + L+GK  I+TG + GIG  MA     + GA VV+    ++ L + +             
Sbjct: 24  EMLQGKKVIVTGASKGIGREMAYH-LAKMGAHVVVTARSKETL-QKVVSHCLELGAASAH 81

Query: 65  YIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTI 124
           YI   + +       V  A    G LD++  N      +  ++       + + + VN +
Sbjct: 82  YIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITN--TSLNLFHDDIHHVRKSMEVNFL 139

Query: 125 GGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELG-- 182
              +    A   M+ Q  G I+  +S   ++A     AY+ SK+ + G    +  E    
Sbjct: 140 SYVVLTVAALP-MLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVS 198

Query: 183 QYGIRVNCVSPYGLATGMSMK 203
           +  + +       + T  +MK
Sbjct: 199 RVNVSITLCVLGLIDTETAMK 219

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score =  154 bits (393), Expect = 2e-46
 Identities = 67/257 (26%), Positives = 114/257 (44%), Gaps = 26/257 (10%)

Query: 12  RLEGKVAIITGGASGIG-AMAVELFHENGAKVVIADVQDKLG----EDLADKLGQDVCYI 66
            +  ++A +TGG  GIG ++   L H++G +VV     +        +    LG D    
Sbjct: 10  VMSQRIAYVTGGMGGIGTSICQRL-HKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYAS 68

Query: 67  HCDISNEDEVINLVDTAVSKFGKLDIMYNNAGIL-DRSFGSILDTPKSDLERLINVNTIG 125
             ++ + D      D   ++ G++D++ NNAGI  D          + D + +I+ N   
Sbjct: 69  EGNVGDWDSTKQAFDKVKAEVGEIDVLVNNAGITRD---VVFRKMTREDWQAVIDTNLTS 125

Query: 126 GFLGAKHAARVMVPQQKGCILFTASACTEIAGL----GSPAYTISKYGILGLVKCLAAEL 181
            F   K     MV +  G I+  +S    + G     G   Y+ +K GI G    LA E+
Sbjct: 126 LFNVTKQVIDGMVERGWGRIINISS----VNGQKGQFGQTNYSTAKAGIHGFTMSLAQEV 181

Query: 182 GQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQ--MGNLKGEFLKTDGIANAALYLA 239
              G+ VN VSP  + T M     + P ++E  ++   +  L G     D I +   +LA
Sbjct: 182 ATKGVTVNTVSPGYIGTDMVKA--IRPDVLEKIVATIPVRRL-G---SPDEIGSIVAWLA 235

Query: 240 SDESSYVSGQNLVVDGG 256
           S+ES + +G +  ++GG
Sbjct: 236 SEESGFSTGADFSLNGG 252

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score =  154 bits (391), Expect = 3e-46
 Identities = 62/270 (22%), Positives = 114/270 (42%), Gaps = 42/270 (15%)

Query: 1   MNGPSSAAPFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLG 60
           M   ++         +  ++TGG  GIG    +    +G KV +        + L     
Sbjct: 1   MTATATEGAKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLFG--- 57

Query: 61  QDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDT-----PKSDL 115
                +  D+++ D V           G ++++ +NAG+         D       +   
Sbjct: 58  -----VEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSA-------DAFLMRMTEEKF 105

Query: 116 ERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGL-GSPA---YTISKYGIL 171
           E++IN N  G F  A+ A+R M   + G ++F  S    ++GL G      Y  SK G++
Sbjct: 106 EKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGS----VSGLWGIGNQANYAASKAGVI 161

Query: 172 GLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQ-----MGNLKGEFL 226
           G+ + +A EL +  +  N V+P  + T M+    +D  + + ++       +G       
Sbjct: 162 GMARSIARELSKANVTANVVAPGYIDTDMTRA--LDERIQQGALQFIPAKRVG------- 212

Query: 227 KTDGIANAALYLASDESSYVSGQNLVVDGG 256
               +A    +LAS+++SY+SG  + VDGG
Sbjct: 213 TPAEVAGVVSFLASEDASYISGAVIPVDGG 242

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score =  154 bits (392), Expect = 4e-46
 Identities = 76/255 (29%), Positives = 131/255 (51%), Gaps = 26/255 (10%)

Query: 13  LEGKVAIITGGASGIGAMAVELFHENGAKVVI-----ADVQDKLGEDLADKLGQDVCYIH 67
           L  ++A++TG + GIG          GAKV +     A   D++   +A   G +   + 
Sbjct: 26  LTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAA-AGGEAFAVK 84

Query: 68  CDISNEDEVINLVDTAVSKFGKLDIMYNNAGIL-DRSFGSILDTPKSDLERLINVNTIGG 126
            D+S E EV  L    + ++G+LD++ NNAGI  D     +L   + D + ++++N  G 
Sbjct: 85  ADVSQESEVEALFAAVIERWGRLDVLVNNAGITRD---TLLLRMKRDDWQSVLDLNLGGV 141

Query: 127 FLGAKHAARVMVPQQKGCILFTASACTEIAGL----GSPAYTISKYGILGLVKCLAAELG 182
           FL ++ AA++M+ Q+ G I+  AS    + G     G   Y+ +K G++GL K +A EL 
Sbjct: 142 FLCSRAAAKIMLKQRSGRIINIAS----VVGEMGNPGQANYSAAKAGVIGLTKTVAKELA 197

Query: 183 QYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASD- 241
             GI VN V+P  +AT M+ +   +  L    + + G       +   +A    +LA+D 
Sbjct: 198 SRGITVNAVAPGFIATDMTSELAAEKLLEVIPLGRYG-------EAAEVAGVVRFLAADP 250

Query: 242 ESSYVSGQNLVVDGG 256
            ++Y++GQ + +DGG
Sbjct: 251 AAAYITGQVINIDGG 265

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score =  154 bits (392), Expect = 5e-46
 Identities = 70/262 (26%), Positives = 118/262 (45%), Gaps = 21/262 (8%)

Query: 5   SSAAPFKRLEGKVAIITGGASGIG-AMAVELFHENGAKVVIADVQDKLG----EDLADKL 59
            +  P      +VA +TGG  G+G A++  L H+ G  V ++  +               
Sbjct: 15  QTQGPGSMQAKRVAFVTGGMGGLGAAISRRL-HDAGMAVAVSHSERNDHVSTWLMHERDA 73

Query: 60  GQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGIL-DRSFGSILDTPKSDLERL 118
           G+D      D+++ +      +  ++ FGK+D++ NNAGI  D    + +   K D + +
Sbjct: 74  GRDFKAYAVDVADFESCERCAEKVLADFGKVDVLINNAGITRD---ATFMKMTKGDWDAV 130

Query: 119 INVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGL----GSPAYTISKYGILGLV 174
           +  +    F   K     MV ++ G I+   S    + G     G   Y  +K GI G  
Sbjct: 131 MRTDLDAMFNVTKQFIAGMVERRFGRIVNIGS----VNGSRGAFGQANYASAKAGIHGFT 186

Query: 175 KCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANA 234
           K LA E  + GI VN VSP  LAT M     V   ++E+ +     + G   + D +A  
Sbjct: 187 KTLALETAKRGITVNTVSPGYLATAMVEA--VPQDVLEAKILPQIPV-GRLGRPDEVAAL 243

Query: 235 ALYLASDESSYVSGQNLVVDGG 256
             +L SD++ +V+G +L ++GG
Sbjct: 244 IAFLCSDDAGFVTGADLAINGG 265

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score =  161 bits (409), Expect = 7e-46
 Identities = 74/256 (28%), Positives = 110/256 (42%), Gaps = 28/256 (10%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADV-QDKLGEDLADKLGQDVCYI---- 66
             + KV IITG   G+G      F + GAKVV+ D+     G+    K    V       
Sbjct: 5   DFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKN 64

Query: 67  ----HCDISNEDEVINLVDTAVSKFGKLDIMYNNAGIL-DRSFGSILDTPKSDLERLINV 121
                 D +N  +   +V+TAV  FG + ++ NNAGIL D S        + D + +I+V
Sbjct: 65  GGVAVADYNNVLDGDKIVETAVKNFGTVHVIINNAGILRDASM---KKMTEKDYKLVIDV 121

Query: 122 NTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAEL 181
           +  G F   K A      Q+ G I+ T+S        G   Y  +K  +LG  + LA E 
Sbjct: 122 HLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFGQANYASAKSALLGFAETLAKEG 181

Query: 182 GQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASD 241
            +Y I+ N ++P    + M+          ES M        E L  + +A   LYL+S 
Sbjct: 182 AKYNIKANAIAPLA-RSRMT----------ESIMPPPM---LEKLGPEKVAPLVLYLSS- 226

Query: 242 ESSYVSGQNLVVDGGF 257
             + ++GQ   V  GF
Sbjct: 227 AENELTGQFFEVAAGF 242

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score =  148 bits (375), Expect = 5e-41
 Identities = 74/260 (28%), Positives = 118/260 (45%), Gaps = 26/260 (10%)

Query: 1   MNGPSSAAPFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLAD--- 57
               +S AP   L+ KV +ITG  +G+G    + F + GAKVV+ D +D       D   
Sbjct: 308 PANDASGAPTVSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKD--ATKTVDEIK 365

Query: 58  KLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGIL-DRSFGSILDTPKSDLE 116
             G +      D++   +   ++   + K+G +DI+ NNAGIL DRSF  +    K + +
Sbjct: 366 AAGGEAWPDQHDVA--KDSEAIIKNVIDKYGTIDILVNNAGILRDRSFAKM---SKQEWD 420

Query: 117 RLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKC 176
            +  V+ IG F  ++ A    V +Q G I+   S        G   Y+ SK GILGL K 
Sbjct: 421 SVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKAGILGLSKT 480

Query: 177 LAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAAL 236
           +A E  +  I+VN V+P+   T M++    +                     D +A   +
Sbjct: 481 MAIEGAKNNIKVNIVAPHA-ETAMTLSIMREQDK-------------NLYHADQVAPLLV 526

Query: 237 YLASDESSYVSGQNLVVDGG 256
           YL + +   V+G+   + GG
Sbjct: 527 YLGT-DDVPVTGETFEIGGG 545

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319

 Score =  154 bits (392), Expect = 1e-45
 Identities = 74/255 (29%), Positives = 107/255 (41%), Gaps = 28/255 (10%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADV-QDKLGEDLADKLGQDVC-YIH-- 67
           R +G+V ++TG   G+G      F E GA VV+ D+  D  G          V   I   
Sbjct: 6   RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR 65

Query: 68  -----CDISNEDEVINLVDTAVSKFGKLDIMYNNAGIL-DRSFGSILDTPKSDLERLINV 121
                 +  + +    LV TA+  FG++D++ NNAGIL DRSF         D + +  V
Sbjct: 66  GGKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSF---SRISDEDWDIIQRV 122

Query: 122 NTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAEL 181
           +  G F   + A   M  Q  G I+ TASA       G   Y+ +K G+LGL   L  E 
Sbjct: 123 HLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSAAKLGLLGLANTLVIEG 182

Query: 182 GQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASD 241
            +  I  N ++P    + M           E+ M +      E LK + +A   L+L   
Sbjct: 183 RKNNIHCNTIAPNA-GSRM----------TETVMPEDL---VEALKPEYVAPLVLWLCH- 227

Query: 242 ESSYVSGQNLVVDGG 256
           ES   +G    V  G
Sbjct: 228 ESCEENGGLFEVGAG 242

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score =  152 bits (386), Expect = 2e-45
 Identities = 69/266 (25%), Positives = 111/266 (41%), Gaps = 42/266 (15%)

Query: 5   SSAAPFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVC 64
           SS    +    +  ++TGG  GIG      F + G KV I     +  E           
Sbjct: 11  SSGLVPRSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEGFLA------- 63

Query: 65  YIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDT-----PKSDLERLI 119
            + CDI++ ++V           G ++++  NAG+         D       + D   ++
Sbjct: 64  -VKCDITDTEQVEQAYKEIEETHGPVEVLIANAGVTK-------DQLLMRMSEEDFTSVV 115

Query: 120 NVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGL-GSPA---YTISKYGILGLVK 175
             N  G F   K A R M+  +KG ++  +S    + GL GS     Y  SK G++G  +
Sbjct: 116 ETNLTGTFRVVKRANRAMLRAKKGRVVLISS----VVGLLGSAGQANYAASKAGLVGFAR 171

Query: 176 CLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQ-----MGNLKGEFLKTDG 230
            LA ELG   I  N V+P  + T M+    +      + +SQ              + + 
Sbjct: 172 SLARELGSRNITFNVVAPGFVDTDMT--KVLTDEQRANIVSQVPLGRYA-------RPEE 222

Query: 231 IANAALYLASDESSYVSGQNLVVDGG 256
           IA    +LASD++SY++G  + VDGG
Sbjct: 223 IAATVRFLASDDASYITGAVIPVDGG 248

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score =  148 bits (376), Expect = 6e-44
 Identities = 69/254 (27%), Positives = 122/254 (48%), Gaps = 27/254 (10%)

Query: 16  KVAIITGGASGIGAMAVELFHENGAKVVI-----ADVQDKLGEDLADKLGQDVCYIHCDI 70
            V ++TG + GIG        + G KV++     A   +++ + +    G        D+
Sbjct: 2   PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEA-YGGQAITFGGDV 60

Query: 71  SNEDEVINLVDTAVSKFGKLDIMYNNAGIL-DRSFGSILDTPKSDLERLINVNTIGGFLG 129
           S E +V  ++ TA+  +G +D++ NNAGI  D     ++   KS  + +I++N  G FL 
Sbjct: 61  SKEADVEAMMKTAIDAWGTIDVVVNNAGITRD---TLLIRMKKSQWDEVIDLNLTGVFLC 117

Query: 130 AKHAARVMVPQQKGCILFTASACTEIAGL----GSPAYTISKYGILGLVKCLAAELGQYG 185
            + A ++M+ ++KG I+  AS    + GL    G   Y  +K G++G  K  A E     
Sbjct: 118 TQAATKIMMKKRKGRIINIAS----VVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRN 173

Query: 186 IRVNCVSPYGLATGMSMKGGVDPALIESSMSQ--MGNLKGEFLKTDGIANAALYLA-SDE 242
           I VN V P  +A+ M+    +   + +  +    +G   G+    + +A    +LA S  
Sbjct: 174 INVNVVCPGFIASDMT--AKLGEDMEKKILGTIPLGRT-GQ---PENVAGLVEFLALSPA 227

Query: 243 SSYVSGQNLVVDGG 256
           +SY++GQ   +DGG
Sbjct: 228 ASYITGQAFTIDGG 241

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score =  144 bits (366), Expect = 1e-42
 Identities = 61/234 (26%), Positives = 96/234 (41%), Gaps = 28/234 (11%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADV-QDKLGEDLADKLGQDVCYIHCDI 70
                  +ITG + GIG     L H  G +V +    + +L + LA +L      +  D+
Sbjct: 2   EGMKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRL-QALAAELE-GALPLPGDV 59

Query: 71  SNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGA 130
             E +    V      FG+L  + NNAG+       + +    +   +++ N  G FLG 
Sbjct: 60  REEGDWARAVAAMEEAFGELSALVNNAGVG--VMKPVHELTLEEWRLVLDTNLTGAFLGI 117

Query: 131 KHAARVMVPQQKGCILFTASACTEIAGL----GSPAYTISKYGILGLVKCLAAELGQYGI 186
           +HA   ++ +  G I+   S    +AG     G  AY  SK+G+LGL      +L +  +
Sbjct: 118 RHAVPALLRRGGGTIVNVGS----LAGKNPFKGGAAYNASKFGLLGLAGAAMLDLREANV 173

Query: 187 RVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLAS 240
           RV  V P          G VD     ++  Q   LK E    D +A A L+   
Sbjct: 174 RVVNVLP----------GSVDTGFAGNTPGQAWKLKPE----D-VAQAVLFALE 212

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score =  145 bits (367), Expect = 1e-42
 Identities = 51/233 (21%), Positives = 90/233 (38%), Gaps = 23/233 (9%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDIS 71
            L+ K+A++TG   G+G   V+    +     +    + L   LA+  G  V  I  DI 
Sbjct: 2   SLKKKIAVVTGATGGMGIEIVKDLSRDHIVYALGRNPEHL-AALAEIEG--VEPIESDIV 58

Query: 72  NEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAK 131
            E      VD  +     +D + + A +      +I     ++    +++N I     ++
Sbjct: 59  KEVLEEGGVD-KLKNLDHVDTLVHAAAVAR--DTTIEAGSVAEWHAHLDLNVIVPAELSR 115

Query: 132 HAARVMVPQQKGCILFTASACTEIAGL----GSPAYTISKYGILGLVKCLAAELGQYGIR 187
                +     GC+++  S     AG     G+  Y  SK+ + GL      E    GIR
Sbjct: 116 QLLPALR-AASGCVIYINS----GAGNGPHPGNTIYAASKHALRGLADAFRKEEANNGIR 170

Query: 188 VNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLAS 240
           V+ VSP    T M ++G +D                 +++   IANA  ++  
Sbjct: 171 VSTVSPGPTNTPM-LQGLMDSQGTN-------FRPEIYIEPKEIANAIRFVID 215

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score =  150 bits (380), Expect = 1e-42
 Identities = 70/264 (26%), Positives = 113/264 (42%), Gaps = 23/264 (8%)

Query: 2   NGPSSAAPFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQ 61
           +    A   K L+GKVA++TG A GIGA   E+F  +GA VV  DV     +        
Sbjct: 200 DSTPPADWDKPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKV 259

Query: 62  DVCYIHCDISNEDEVINLVDTAVSKFG-KLDIMYNNAGIL-DRSFGSILDTPKSDLERLI 119
               +  D++ +D V  +        G K+DI+ NNAGI  D     + +  +   + +I
Sbjct: 260 GGTALTLDVTADDAVDKITAHVTEHHGGKVDILVNNAGITRD---KLLANMDEKRWDAVI 316

Query: 120 NVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGL----GSPAYTISKYGILGLVK 175
            VN +      +         + G ++  +S    +AG+    G   Y  +K G++GL +
Sbjct: 317 AVNLLAPQRLTEGLVGNGTIGEGGRVIGLSS----MAGIAGNRGQTNYATTKAGMIGLAE 372

Query: 176 CLAAELGQYGIRVNCVSPYGLATGMSMK---GGVDPALIESSMSQMGNLKGEFLKTDGIA 232
            LA  L   GI +N V+P  + T M+        +     +S+ Q G       +   +A
Sbjct: 373 ALAPVLADKGITINAVAPGFIETKMTEAIPLATREVGRRLNSLFQGG-------QPVDVA 425

Query: 233 NAALYLASDESSYVSGQNLVVDGG 256
               Y AS  S+ V+G  + V G 
Sbjct: 426 ELIAYFASPASNAVTGNTIRVCGQ 449

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613

 Score =  151 bits (384), Expect = 2e-42
 Identities = 72/263 (27%), Positives = 120/263 (45%), Gaps = 28/263 (10%)

Query: 5   SSAAPFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADV-QDKLGEDLADKLGQDV 63
           SS+    R +G+VA++TG  +G+G     LF E GAKVV+ D+     G+  + +    V
Sbjct: 9   SSSDGKLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIV 68

Query: 64  CY-IHCD----ISNEDEVI---NLVDTAVSKFGKLDIMYNNAGIL-DRSFGSILDTPKSD 114
              I       +++ + VI    +++TA+  FG++DI+ NNAGIL DRS     +    D
Sbjct: 69  VDEIRKAGGEAVADYNSVIDGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSE---QD 125

Query: 115 LERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLV 174
              + +V+  G F   + A   M  Q  G I+ T+S        G   YT +K G++GL 
Sbjct: 126 WNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFGQVNYTAAKMGLIGLA 185

Query: 175 KCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANA 234
             +A E  +  +  N + P   A+ M+   G+ P ++ + +           K   IA  
Sbjct: 186 NTVAIEGARNNVLCNVIVPTA-ASRMT--EGILPDILFNEL-----------KPKLIAPV 231

Query: 235 ALYLASDESSYVSGQNLVVDGGF 257
             YL  +     +G  +    G+
Sbjct: 232 VAYLCHESCE-DNGSYIESAAGW 253

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score =  143 bits (363), Expect = 7e-42
 Identities = 53/262 (20%), Positives = 90/262 (34%), Gaps = 25/262 (9%)

Query: 11  KRLEGKVAIITGGASGIG-AMAVEL--FHENGAKVVIADVQDKLGEDLADKLGQD----- 62
             L   V ++TG + G G A+A +L      G+ ++++   + +   L ++LG       
Sbjct: 2   DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLK 61

Query: 63  VCYIHCDISNEDEVINLVDTAVSKFG----KLDIMYNNAGIL-DRSFGSILDTPKSDLER 117
           V     D+  E  V  L+            +  ++ NNA  L D S G +     +++  
Sbjct: 62  VVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNN 121

Query: 118 LINVNTIGGFLGAKHAARVMV--PQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVK 175
              +N                  P     ++  +S C      G   Y   K     L +
Sbjct: 122 YWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLYQ 181

Query: 176 CLAAELGQYGIRVNCVSPYGLATGMS---MKGGVDPALIESSMSQMGNLKGEFLKTDGIA 232
            LAAE  +  +RV   +P  L   M     +   DP L         +  G  +     A
Sbjct: 182 VLAAE--EPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSD--GALVDCGTSA 237

Query: 233 NAALYLASDESSYVSGQNLVVD 254
              L L   + ++ SG    VD
Sbjct: 238 QKLLGLLQKD-TFQSGA--HVD 256

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score =  141 bits (357), Expect = 4e-41
 Identities = 60/247 (24%), Positives = 106/247 (42%), Gaps = 23/247 (9%)

Query: 13  LEGKVAIITGGASGIG-AMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDIS 71
           +  K  ++   + GIG A+A  L  + GA+V I        E+L  + G    Y+ CD+ 
Sbjct: 17  IRDKGVLVLAASRGIGRAVADVL-SQEGAEVTICAR----NEELLKRSGHR--YVVCDLR 69

Query: 72  NEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAK 131
                   +D    K  ++DI+  NAG      G   +    D +  I+   +      +
Sbjct: 70  K------DLDLLFEKVKEVDILVLNAGG--PKAGFFDELTNEDFKEAIDSLFLNMIKIVR 121

Query: 132 HAARVMVPQQKGCILFTASA--CTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVN 189
           +    M  +  G I+   S    + I  L +     ++  + G +K L+ E+  YGI VN
Sbjct: 122 NYLPAMKEKGWGRIVAITSFSVISPIENLYT--SNSARMALTGFLKTLSFEVAPYGITVN 179

Query: 190 CVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQ 249
           CV+P    T    +  +     +  +     +     K + IA+   +L S+++SY++GQ
Sbjct: 180 CVAPGWTETERVKE--LLSEEKKKQVESQIPM-RRMAKPEEIASVVAFLCSEKASYLTGQ 236

Query: 250 NLVVDGG 256
            +VVDGG
Sbjct: 237 TIVVDGG 243

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score =  131 bits (333), Expect = 9e-38
 Identities = 52/234 (22%), Positives = 90/234 (38%), Gaps = 27/234 (11%)

Query: 14  EGKVAIITGGASGIGAMAVELFHENGAKVVIA----DVQDKLGEDLADKLGQDVCYIHCD 69
           E KVA+ITG + GIG         +G  + +     D  +K+  +L  + G +V Y H D
Sbjct: 1   EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLD 60

Query: 70  ISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLG 129
           +S  + V       + +FG +D++  NAG+    F  + +  + +   +I VN +G +  
Sbjct: 61  VSKAESVEEFSKKVLERFGDVDVVVANAGLG--YFKRLEELSEEEFHEMIEVNLLGVWRT 118

Query: 130 AKHAARVMVPQQKGCILFTASACTEIAGL---GSPAYTISKYGILGLVKCLAAELGQYGI 186
            K     +       ++ T+     ++         Y  +K+    LV+    E     +
Sbjct: 119 LKAFLDSLKRTGGLALVTTSD----VSARLIPYGGGYVSTKWAARALVRTFQIE--NPDV 172

Query: 187 RVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLAS 240
           R   + P          G VD     S        +  +LK D IA A   L  
Sbjct: 173 RFFELRP----------GAVDTYFGGSKPG--KPKEKGYLKPDEIAEAVRCLLK 214

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score =  126 bits (319), Expect = 5e-36
 Identities = 32/206 (15%), Positives = 66/206 (32%), Gaps = 24/206 (11%)

Query: 15  GKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNED 74
               ++ G +  +G+   E   +  A+V+ A              G+    +  DI+N D
Sbjct: 3   AMKILLIGASGTLGSAVKERLEK-KAEVITA--------------GRHSGDVTVDITNID 47

Query: 75  EVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAA 134
                +     + GK+D + +  G    +F  + +         I+    G         
Sbjct: 48  S----IKKMYEQVGKVDAIVSATGSA--TFSPLTELTPEKNAVTISSKLGGQINLVLLGI 101

Query: 135 RVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPY 194
             +  +  G    T     E   +   +  ++   +    K  A E+ + GIR+N VSP 
Sbjct: 102 DSLNDK--GSFTLTTGIMMEDPIVQGASAAMANGAVTAFAKSAAIEMPR-GIRINTVSPN 158

Query: 195 GLATGMSMKGGVDPALIESSMSQMGN 220
            L              +    +++  
Sbjct: 159 VLEESWDKLEPFFEGFLPVPAAKVAR 184

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score =  128 bits (325), Expect = 5e-36
 Identities = 64/257 (24%), Positives = 113/257 (43%), Gaps = 29/257 (11%)

Query: 1   MNGPSSAAPFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVI-ADVQDKLGEDLADKL 59
             G  +    +R   ++A++TG + GIGA       + G KVV  A     + E+LA + 
Sbjct: 18  FQGHMARPGMERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNI-EELAAEC 76

Query: 60  GQD-----VCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSD 114
                   +    CD+SNE++++++     S+   +DI  NNAG+      ++L    S 
Sbjct: 77  KSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLA--RPDTLLSGSTSG 134

Query: 115 LERLINVNTIGGFLGAKHAARVMVPQQ--KGCILFTASACTEIAGLGSPA------YTIS 166
            + + NVN +   +  + A + M  +    G I+   S    ++G           Y+ +
Sbjct: 135 WKDMFNVNVLALSICTREAYQSMKERNVDDGHIININS----MSGHRVLPLSVTHFYSAT 190

Query: 167 KYGILGLVKCLAAELGQYG--IRVNCVSPYGLATGMSMK-GGVDPALIESSMSQMGNLKG 223
           KY +  L + L  EL +    IR  C+SP  + T  + K    DP    ++  QM     
Sbjct: 191 KYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATYEQM----- 245

Query: 224 EFLKTDGIANAALYLAS 240
           + LK + +A A +Y+ S
Sbjct: 246 KCLKPEDVAEAVIYVLS 262

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score =  126 bits (320), Expect = 8e-36
 Identities = 42/230 (18%), Positives = 82/230 (35%), Gaps = 28/230 (12%)

Query: 16  KVAIITGGASGIGAMAVELFHENGAKVVI-ADVQDKLGEDLADKLGQDVCYIHCDISNED 74
            + +ITG +SG+GA   +L+   G    +    + KL   + + L  +V Y   D+++  
Sbjct: 2   SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKL-STVTNCLSNNVGYRARDLASHQ 60

Query: 75  EVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAA 134
           EV  L +           + ++AG     FG + +     ++ LI  N        +   
Sbjct: 61  EVEQLFEQL---DSIPSTVVHSAGSG--YFGLLQEQDPEQIQTLIENNLSSAINVLRELV 115

Query: 135 RVMVPQQKGCILFTASACTEIAGL----GSPAYTISKYGILGLVKCLAAELGQYGIRVNC 190
           +     Q   ++   S     A          Y   K+ + GL++ +  EL    +++  
Sbjct: 116 KRYK-DQPVNVVMIMS----TAAQQPKAQESTYCAVKWAVKGLIESVRLELKGKPMKIIA 170

Query: 191 VSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLAS 240
           V P          GG+     E+S   +      F+  +  A       +
Sbjct: 171 VYP----------GGMATEFWETSGKSLDTSS--FMSAEDAALMIHGALA 208

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score =  121 bits (305), Expect = 2e-33
 Identities = 71/243 (29%), Positives = 112/243 (46%), Gaps = 29/243 (11%)

Query: 11  KRLEGKVAIITGGASGIGAMAVELFHENGAKVVI-ADVQDKLGEDLADKL---GQDVCYI 66
             L+GKVA+ITG +SGIG          GA V I A   +KL   L D+L   G  V  +
Sbjct: 3   SALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKL-RALGDELTAAGAKVHVL 61

Query: 67  HCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGG 126
             D+++   V   V + V   G LDI+ NNAGI+    G + D   +D  R+I+ N +G 
Sbjct: 62  ELDVADRQGVDAAVASTVEALGGLDILVNNAGIM--LLGPVEDADTTDWTRMIDTNLLGL 119

Query: 127 FLGAKHAARVMVPQQKGCILFTASACTEIAGL----GSPAYTISKYGILGLVKCLAAELG 182
               + A   ++ + KG ++  +S    IAG      +  Y  +K+G+    + L  E+ 
Sbjct: 120 MYMTRAALPHLL-RSKGTVVQMSS----IAGRVNVRNAAVYQATKFGVNAFSETLRQEVT 174

Query: 183 QYGIRVNCVSPYG-----LATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALY 237
           + G+RV  + P G     L   ++        + E  +SQ+  L+ +    D IA A  Y
Sbjct: 175 ERGVRVVVIEP-GTTDTELRGHITHTA--TKEMYEQRISQIRKLQAQ----D-IAEAVRY 226

Query: 238 LAS 240
             +
Sbjct: 227 AVT 229

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score =  120 bits (304), Expect = 3e-33
 Identities = 52/245 (21%), Positives = 96/245 (39%), Gaps = 19/245 (7%)

Query: 1   MNGPSSAAPFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVI-ADVQDKLGEDLADKL 59
           M G       +    K+ +ITG +SGIG      F E G  +++ A   ++L + L    
Sbjct: 4   MTGGQQMG--RGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERL-KALN--- 57

Query: 60  GQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLI 119
             +      D++++      +  A   +G  D + NNAG++    G I     ++ +R+ 
Sbjct: 58  LPNTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVNNAGMM--LLGQIDTQEANEWQRMF 115

Query: 120 NVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGL----GSPAYTISKYGILGLVK 175
           +VN +G   G +     M  +  G I+  +S    IAG        AY  +K+ +  + +
Sbjct: 116 DVNVLGLLNGMQAVLAPMKARNCGTIINISS----IAGKKTFPDHAAYCGTKFAVHAISE 171

Query: 176 CLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAA 235
            +  E+    +RV  ++P        +        I+          G  L  D +A A 
Sbjct: 172 NVREEVAASNVRVMTIAP-SAVKT-ELLSHTTSQQIKDGYDAWRVDMGGVLAADDVARAV 229

Query: 236 LYLAS 240
           L+   
Sbjct: 230 LFAYQ 234

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score =  119 bits (302), Expect = 7e-33
 Identities = 57/240 (23%), Positives = 98/240 (40%), Gaps = 30/240 (12%)

Query: 13  LEGKVAIITGGASGIGAMAVELFHENGAKVVI-ADVQDKLGEDLADKL---GQDVCYIHC 68
           +  KV +ITG + GIG          GAK+++ A  Q ++ E +A ++   G        
Sbjct: 2   VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARI-EAIATEIRDAGGTALAQVL 60

Query: 69  DISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFL 128
           D+++   V      AV  +G++D++ NNAG++      +      + ER+I+VN  G   
Sbjct: 61  DVTDRHSVAAFAQAAVDTWGRIDVLVNNAGVM--PLSPLAAVKVDEWERMIDVNIKGVLW 118

Query: 129 GAKHAARVMVPQQKGCILFTASACTEIAGL----GSPAYTISKYGILGLVKCLAAELGQY 184
           G      +M  Q+ G I+   S    I  L     +  Y  +K+ +  +   L  E    
Sbjct: 119 GIGAVLPIMEAQRSGQIINIGS----IGALSVVPTAAVYCATKFAVRAISDGLRQE--ST 172

Query: 185 GIRVNCVSPYGL-ATGMSM---KGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLAS 240
            IRV CV+P G+  + ++          A        M   +   L+   IA A   +  
Sbjct: 173 NIRVTCVNP-GVVESELAGTITHEETMAA--------MDTYRAIALQPADIARAVRQVIE 223

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score =  117 bits (296), Expect = 2e-32
 Identities = 37/185 (20%), Positives = 76/185 (41%), Gaps = 18/185 (9%)

Query: 18  AIITGGASGIG-AMAVELFHENGAKVVIADV-QDKLGEDLADKLGQDVCYIHCDISNEDE 75
            +ITG   G+G A A  L    G  ++++      L  +LA ++G     +  D+++E E
Sbjct: 3   VLITGATGGLGGAFARAL---KGHDLLLSGRRAGAL-AELAREVGARA--LPADLADELE 56

Query: 76  VINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAAR 135
                   + + G LD++ +  G       S+ +  +  +E ++  +     L A    +
Sbjct: 57  A----KALLEEAGPLDLLVHAVGKA--GRASVREAGRDLVEEMLAAH----LLTAAFVLK 106

Query: 136 VMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYG 195
               Q+    +F  +    +   G  AY  +K  +   ++    EL + G+ +  V    
Sbjct: 107 HARFQKGARAVFFGAYPRYVQVPGFAAYAAAKGALEAYLEAARKELLREGVHLVLVRLPA 166

Query: 196 LATGM 200
           +ATG+
Sbjct: 167 VATGL 171

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score =  116 bits (294), Expect = 7e-32
 Identities = 43/182 (23%), Positives = 76/182 (41%), Gaps = 11/182 (6%)

Query: 17  VAIITGGASGIGAMAVELFHENGAKVVI-ADVQDKLGEDLADKLGQDVCYIHCDISNEDE 75
           + ++TG  +G G      F + G KV+     Q++L ++L D+LG ++     D+ N   
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERL-QELKDELGDNLYIAQLDVRNRAA 60

Query: 76  VINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAAR 135
           +  ++ +  +++  +DI+ NNAG L             D E +I+ N  G     +    
Sbjct: 61  IEEMLASLPAEWCNIDILVNNAG-LALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLP 119

Query: 136 VMVPQQKGCILFTASACTEIAGL----GSPAYTISKYGILGLVKCLAAELGQYGIRVNCV 191
            MV +  G I+   S     AG     G   Y  +K  +      L  +L    +RV  +
Sbjct: 120 GMVERNHGHIINIGS----TAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDI 175

Query: 192 SP 193
            P
Sbjct: 176 EP 177

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score =  115 bits (289), Expect = 7e-31
 Identities = 45/200 (22%), Positives = 73/200 (36%), Gaps = 14/200 (7%)

Query: 2   NGPSSAAPFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVI-ADVQDKLGEDLADKLG 60
           +  S   P          ITG  SG G      F E G  +V+    +++L + LA +L 
Sbjct: 8   HHSSGLVPRGSHMSSTLFITGATSGFGEACARRFAEAGWSLVLTGRREERL-QALAGELS 66

Query: 61  QD--VCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERL 118
               V  +  D+ +   +   VD    +F  L  + NNAG L             D + +
Sbjct: 67  AKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGLINNAG-LALGTDPAQSCDLDDWDTM 125

Query: 119 INVNTIGGFLGAKHAARVMVPQQKGC-ILFTASACTEIAGL----GSPAYTISKYGILGL 173
           ++ N  G     +     ++    G  I+   S    +AG     GS  Y  +K  +   
Sbjct: 126 VDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGS----VAGKWPYPGSHVYGGTKAFVEQF 181

Query: 174 VKCLAAELGQYGIRVNCVSP 193
              L  +L   G+RV  + P
Sbjct: 182 SLNLRCDLQGTGVRVTNLEP 201

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score =  115 bits (290), Expect = 8e-31
 Identities = 53/252 (21%), Positives = 97/252 (38%), Gaps = 29/252 (11%)

Query: 5   SSAAPFKRLEGKVAIITGGASGIGAMAVELFHENG---AKVVI-ADVQDKLGEDLADKLG 60
                 +RL  K  +ITG ++GIG      + E      K+++ A   +KL E+L   + 
Sbjct: 23  QGRKAAERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKL-EELKKTID 81

Query: 61  QD-----VCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDL 115
           Q+     V     DI+  +++   ++    +F  +DI+ NNAG        +      D+
Sbjct: 82  QEFPNAKVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAG-KALGSDRVGQIATEDI 140

Query: 116 ERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGL----GSPAYTISKYGIL 171
           + + + N        +    +   +  G I+   S    IAG         Y  SK+ + 
Sbjct: 141 QDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGS----IAGRDAYPTGSIYCASKFAVG 196

Query: 172 GLVKCLAAELGQYGIRVNCVSPYGLATGMSM---KGGVDPALIESSMSQMGNLKGEFLKT 228
                L  EL    IRV  ++P  + T  S+   +G  +    ++       L  +    
Sbjct: 197 AFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRG--NEEQAKNVYKDTTPLMAD---- 250

Query: 229 DGIANAALYLAS 240
           D +A+  +Y  S
Sbjct: 251 D-VADLIVYATS 261

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score =  110 bits (278), Expect = 3e-29
 Identities = 44/196 (22%), Positives = 87/196 (44%), Gaps = 6/196 (3%)

Query: 16  KVAIITGGASGIGAMAVELFHENGAKVVIA--DVQDKLGEDLADKLGQDVCYIHCDISNE 73
           KV ++TG +SG G    E     G  V+      +    +DL          I  D+++ 
Sbjct: 6   KVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEAL--DDLVAAYPDRAEAISLDVTDG 63

Query: 74  DEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHA 133
           + +  +    ++++G++D++ NNAG      G+  +T + +L  L  ++  G     +  
Sbjct: 64  ERIDVVAADVLARYGRVDVLVNNAGRT--QVGAFEETTERELRDLFELHVFGPARLTRAL 121

Query: 134 ARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSP 193
              M  +  G ++  +S   +++  G  AY+ +K  +  L + LA E+  +GI+V  V P
Sbjct: 122 LPQMRERGSGSVVNISSFGGQLSFAGFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEP 181

Query: 194 YGLATGMSMKGGVDPA 209
               T +  KG    +
Sbjct: 182 GAFRTNLFGKGAAYFS 197

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score =  111 bits (280), Expect = 3e-29
 Identities = 40/201 (19%), Positives = 80/201 (39%), Gaps = 19/201 (9%)

Query: 14  EGKVAIITGGASGIGAMAVELFHENGAKVV--------IADVQDKLGEDLADKLGQDVCY 65
             K+ +ITG +SG G +  E     G +V               +     A     D+  
Sbjct: 4   SKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRT 63

Query: 66  IHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIG 125
           +  D+ ++  V   +D  + + G++D++ +NAG +   FG            L ++N   
Sbjct: 64  LELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHM--VFGPAEAFTPEQFAELYDIN--- 118

Query: 126 GFLGAKHAARVMVP----QQKGCILFTASACTEIAGLGSPA-YTISKYGILGLVKCLAAE 180
             L  +   R  +P    Q+ G +++ +S+ +        A Y  +K  +  +    A E
Sbjct: 119 -VLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPPYLAPYFAAKAAMDAIAVQYARE 177

Query: 181 LGQYGIRVNCVSPYGLATGMS 201
           L ++GI  + + P    +G +
Sbjct: 178 LSRWGIETSIIVPGAFTSGTN 198

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score =  101 bits (254), Expect = 1e-25
 Identities = 53/320 (16%), Positives = 95/320 (29%), Gaps = 97/320 (30%)

Query: 6   SAAPFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL----GQ 61
              P    + + A++TGG  GIG    +    NG  VV+       G +  +KL     +
Sbjct: 3   ETCPNTVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHE 62

Query: 62  DVCYIHCDISNEDEVI-NLVDTAVSKFGKLDIMYNNAGI--------------------- 99
           +V +   D+++    + +L D   + FGKLDI+ NNAG+                     
Sbjct: 63  NVVFHQLDVTDPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDS 122

Query: 100 -------LDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASAC 152
                         ++       E  + +N  G     +    ++       I+  +S+ 
Sbjct: 123 EELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSST 182

Query: 153 TEIAGLGSP-------------------------------------------AYTISKYG 169
             +  + +                                            AYT SK  
Sbjct: 183 GSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKAC 242

Query: 170 ILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTD 229
           +    + LA ++     +VNCV P  + T M+   G                       +
Sbjct: 243 LNAYTRVLANKIP--KFQVNCVCPGLVKTEMNYGIG-------------------NYTAE 281

Query: 230 GIANAALYLASDESSYVSGQ 249
             A   + +A       SG 
Sbjct: 282 EGAEHVVRIALFPDDGPSGF 301

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* Length = 265

 Score = 98.4 bits (246), Expect = 1e-24
 Identities = 68/278 (24%), Positives = 113/278 (40%), Gaps = 57/278 (20%)

Query: 13  LEGKVAIITGGAS------GIGAMAVELFHENGAKVVIADVQDKLG---EDLADKLGQDV 63
           L GK  ++TG AS      GI     +  H  GA++      DKL    E+ A +LG D+
Sbjct: 7   LSGKRILVTGVASKLSIAYGI----AQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDI 62

Query: 64  CYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLE-RLINVN 122
               CD++ +  +  +       + K D   +          SI   P   L+   +N  
Sbjct: 63  VL-QCDVAEDASIDTMFAELGKVWPKFDGFVH----------SIGFAPGDQLDGDYVNAV 111

Query: 123 TIGGFLGA------------KHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGI 170
           T  GF  A            K    ++       +L T S       LG+    I  Y +
Sbjct: 112 TREGFKIAHDISSYSFVAMAKACRSML--NPGSALL-TLSY------LGA-ERAIPNYNV 161

Query: 171 LGLVKC--------LAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLK 222
           +GL K         +A  +G  G+RVN +S   + T ++  G  D   + +    +  ++
Sbjct: 162 MGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRT-LAASGIKDFRKMLAHCEAVTPIR 220

Query: 223 GEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVV 260
              +  + + N+A +L SD S+ +SG+ + VDGGFS+ 
Sbjct: 221 -RTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSIA 257

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} Length = 271

 Score = 97.7 bits (244), Expect = 2e-24
 Identities = 63/278 (22%), Positives = 110/278 (39%), Gaps = 57/278 (20%)

Query: 13  LEGKVAIITGGAS------GIGAMAVELFHENGAKVVIADVQDKLG---EDLADKLGQDV 63
           L+GK  ++TG  S      GI     +     GA++    V D+      + A + G ++
Sbjct: 12  LDGKRILLTGLLSNRSIAYGI----AKACKREGAELAFTYVGDRFKDRITEFAAEFGSEL 67

Query: 64  CYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLE-RLINVN 122
            +  CD++++ ++  L  +  + +  LD + +          SI   P+  +    ++  
Sbjct: 68  VF-PCDVADDAQIDALFASLKTHWDSLDGLVH----------SIGFAPREAIAGDFLDGL 116

Query: 123 TIGGFLGA------------KHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGI 170
           T   F  A            K A  ++       +L T S       LG+    I  Y  
Sbjct: 117 TRENFRIAHDISAYSFPALAKAALPML--SDDASLL-TLSY------LGAERA-IPNYNT 166

Query: 171 LGLVKC--------LAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLK 222
           +GL K         LA  LG  G+RVN +S   + T ++  G      I   +     LK
Sbjct: 167 MGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKT-LAASGIKSFGKILDFVESNSPLK 225

Query: 223 GEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVV 260
              +  + + NA  +L SD +S V+ + + VD GF+ V
Sbjct: 226 -RNVTIEQVGNAGAFLLSDLASGVTAEVMHVDSGFNAV 262

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 2jjy_A* Length = 280

 Score = 97.3 bits (243), Expect = 4e-24
 Identities = 58/277 (20%), Positives = 104/277 (37%), Gaps = 55/277 (19%)

Query: 13  LEGKVAIITGGAS------GIGAMAVELFHENGAKVVIADVQDKLG---EDLADKLGQDV 63
           L GK  +ITG  S      GI     +  H  GA++       +     E L  +     
Sbjct: 24  LAGKKILITGLLSNKSIAYGI----AKAMHREGAELAFT-YVGQFKDRVEKLCAEFNPAA 78

Query: 64  CYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLE-RLINVN 122
               CD+ ++ E+ +L       +  LD + +          SI   P+  LE   I+  
Sbjct: 79  VL-PCDVISDQEIKDLFVELGKVWDGLDAIVH----------SIAFAPRDQLEGNFIDCV 127

Query: 123 TIGGFLGA-----------KHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGIL 171
           T  GF  A               R M+  +   ++   +       +G+    +  Y  +
Sbjct: 128 TREGFSIAHDISAYSFAALAKEGRSMMKNRNASMV-ALTY------IGA-EKAMPSYNTM 179

Query: 172 GLVKC--------LAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKG 223
           G+ K          A  LG+ GI+VN VS   + T ++  G  +   +    + +  LK 
Sbjct: 180 GVAKASLEATVRYTALALGEDGIKVNAVSAGPIKT-LAASGISNFKKMLDYNAMVSPLK- 237

Query: 224 EFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVV 260
           + +    + N   +L SD ++ ++G+ + VD G+  V
Sbjct: 238 KNVDIMEVGNTVAFLCSDMATGITGEVVHVDAGYHCV 274

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} Length = 285

 Score = 97.3 bits (243), Expect = 4e-24
 Identities = 56/267 (20%), Positives = 120/267 (44%), Gaps = 35/267 (13%)

Query: 13  LEGKVAIITGGAS------GIGAMAVELFHENGAKVVIADVQDKLG---EDLADKLGQDV 63
           LEGK A+ITG A+      GI     + FH  GA++       KL     ++A   G D+
Sbjct: 19  LEGKRALITGVANERSIAYGI----AKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDL 74

Query: 64  CYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSF--GSILDTPKSDLERLINV 121
               CD+S ++++ NL       +G LDI+ ++     +    G ++DT +   +  +++
Sbjct: 75  VV-KCDVSLDEDIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDI 133

Query: 122 NTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKC----- 176
           +     +        ++  + G I+ T S        G+    +  Y ++G+ K      
Sbjct: 134 SVYS-LIALTRELLPLMEGRNGAIV-TLSY------YGA-EKVVPHYNVMGIAKAALEST 184

Query: 177 ---LAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIAN 233
              LA ++ ++G R+N +S   + T ++        L+    +++     + +  + + +
Sbjct: 185 VRYLAYDIAKHGHRINAISAGPVKT-LAAYSITGFHLLMEHTTKVNPFG-KPITIEDVGD 242

Query: 234 AALYLASDESSYVSGQNLVVDGGFSVV 260
            A++L SD +  ++G+ + VD G+ ++
Sbjct: 243 TAVFLCSDWARAITGEVVHVDNGYHIM 269

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* Length = 261

 Score = 95.7 bits (239), Expect = 1e-23
 Identities = 60/267 (22%), Positives = 115/267 (43%), Gaps = 36/267 (13%)

Query: 13  LEGKVAIITGGAS------GIGAMAVELFHENGAKVVIADVQDKLG---EDLADKLGQDV 63
           L GK A++ G  +       I         E GA+V ++   ++L    E LA+ LG  +
Sbjct: 6   LSGKKALVMGVTNQRSLGFAI----AAKLKEAGAEVALSYQAERLRPEAEKLAEALGGAL 61

Query: 64  CYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSF--GSILDTPKSDLERLINV 121
            +   D++ ++E+  L       FG LD + +      R    G  +DT + D    + V
Sbjct: 62  LF-RADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEV 120

Query: 122 NTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKC----- 176
           +       A+ A  ++  ++ G I+ T +         S    + KY ++ + K      
Sbjct: 121 SAYSLVAVARRAEPLL--REGGGIV-TLTY------YAS-EKVVPKYNVMAIAKAALEAS 170

Query: 177 ---LAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIAN 233
              LA ELG  G+RVN +S   + T ++ +       +   ++Q   L+   +  + + N
Sbjct: 171 VRYLAYELGPKGVRVNAISAGPVRT-VAARSIPGFTKMYDRVAQTAPLR-RNITQEEVGN 228

Query: 234 AALYLASDESSYVSGQNLVVDGGFSVV 260
             L+L S  +S ++G+ + VD G+ ++
Sbjct: 229 LGLFLLSPLASGITGEVVYVDAGYHIM 255

>4alk_A ENR, enoyl-[acyl-carrier-protein] reductase [NADPH]; oxidoreductase, short-chain dehydrogenase/reductase superfam fatty acid biosynthesis; HET: NAP E9P GLU; 1.90A {Staphylococcus aureus} PDB: 4alj_A* 4ali_A* 4alm_A 4aln_A 3gr6_A* 3gns_A* 3gnt_A 4all_A* Length = 282

 Score = 96.2 bits (240), Expect = 1e-23
 Identities = 65/268 (24%), Positives = 118/268 (44%), Gaps = 36/268 (13%)

Query: 13  LEGKVAIITGGAS------GIGAMAVELFHENGAKVVIADVQDKLG---EDLADKLGQDV 63
           LE K  +I G A+      G+     ++  + GAK+V    +++     E L ++L Q  
Sbjct: 30  LENKTYVIMGIANKRSIAFGV----AKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPE 85

Query: 64  CYI-HCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSF--GSILDTPKSDLERLIN 120
            ++   D+ +++EVIN  +      G +D +Y++    +     G   +T +       +
Sbjct: 86  AHLYQIDVQSDEEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQD 145

Query: 121 VNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKC---- 176
           +++    + A  A ++M   + G I+   +       LG   + +  Y ++G+ K     
Sbjct: 146 ISSYSLTIVAHEAKKLM--PEGGSIV-ATTY------LGG-EFAVQNYNVMGVAKASLEA 195

Query: 177 ----LAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIA 232
               LA +LG   IRVN +S   + T +S KG      I   + +   LK   +    + 
Sbjct: 196 NVKYLALDLGPDNIRVNAISAGPIRT-LSAKGVGGFNTILKEIEERAPLK-RNVDQVEVG 253

Query: 233 NAALYLASDESSYVSGQNLVVDGGFSVV 260
             A YL SD SS V+G+N+ VD GF  +
Sbjct: 254 KTAAYLLSDLSSGVTGENIHVDSGFHAI 281

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* Length = 296

 Score = 95.8 bits (239), Expect = 2e-23
 Identities = 71/289 (24%), Positives = 120/289 (41%), Gaps = 58/289 (20%)

Query: 2   NGPSSAAPFKRLEGKVAIITGGAS------GIGAMAVELFHENGAKVVIADVQDKLG--- 52
            GP S      +EGK  +I G A+      GI     +     GA+V +  + +      
Sbjct: 17  QGPGSMRTGMLMEGKKGVIIGVANDKSLAWGI----AKAVCAQGAEVALTYLSETFKKRV 72

Query: 53  EDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPK 112
           + LA+ LG  +    CD+S+ + V N+      ++G LD + +          ++  + K
Sbjct: 73  DPLAESLGVKLTV-PCDVSDAESVDNMFKVLAEEWGSLDFVVH----------AVAFSDK 121

Query: 113 SDLE-RLINVNTIGGFLGA------------KHAARVMVPQQKGCILFTASACTEIAGLG 159
           ++L+ R ++  ++G FL +              A  +M     G IL T S        G
Sbjct: 122 NELKGRYVDT-SLGNFLTSMHISCYSFTYIASKAEPLM--TNGGSIL-TLSY------YG 171

Query: 160 SPAYTISKYGILGLVKC--------LAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALI 211
           +    +  Y ++G+ K         LA +LG+  IRVN +S   + T ++  G  D   I
Sbjct: 172 A-EKVVPHYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRT-LASSGISDFHYI 229

Query: 212 ESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVV 260
            +       L+      D +  AALYL SD     +G+ + VD G+ VV
Sbjct: 230 LTWNKYNSPLR-RNTTLDDVGGAALYLLSDLGRGTTGETVHVDCGYHVV 277

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... Length = 269

 Score = 95.0 bits (237), Expect = 2e-23
 Identities = 53/278 (19%), Positives = 103/278 (37%), Gaps = 45/278 (16%)

Query: 13  LEGKVAIITGGASG--IGAMAVELFHENGAKVVIADVQ-DKLGEDLADKLGQDVCYIHCD 69
           L+GK  +++G  +   I      +  E GA++V+      +L + + D+L      +  D
Sbjct: 5   LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELD 64

Query: 70  ISNEDEVINLVDTAVSKFG---KLDIMYNNAGILDRS---FGSILDTPKSDLERLINVNT 123
           + NE+ + +L        G   KLD + ++ G + ++        D P +D+ + I+++ 
Sbjct: 65  VQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISA 124

Query: 124 IGGFLG-AKHAARVMVPQQKGCIL---FTASACTEIAGLGSPAYTISKYGILGLVKC--- 176
              +   AK    +M     G I+   F  S              +  Y  + + K    
Sbjct: 125 YS-YASMAKALLPIM--NPGGSIVGMDFDPS------------RAMPAYNWMTVAKSALE 169

Query: 177 -----LAAELGQYGIRVNCVSPYGLAT--GMSMKGGVDPALIESSMSQMGN-------LK 222
                +A E G+YG+R N V+   + T    ++ GG       + +  +         + 
Sbjct: 170 SVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIG 229

Query: 223 GEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVV 260
                   +A     L SD     +G  +  DGG    
Sbjct: 230 WNMKDATPVAKTVCALLSDWLPATTGDIIYADGGAHTQ 267

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* Length = 275

 Score = 94.6 bits (236), Expect = 3e-23
 Identities = 66/267 (24%), Positives = 113/267 (42%), Gaps = 36/267 (13%)

Query: 13  LEGKVAIITGGAS------GIGAMAVELFHENGAKVVIADVQDKLG---EDLADKLGQDV 63
           L+GK  +I G A+      GI     +     GA +    + + L      +A +L    
Sbjct: 4   LKGKKGLIVGVANNKSIAYGI----AQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPY 59

Query: 64  CYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSF--GSILDTPKSDLERLINV 121
            Y   D+S E+   +L ++     G LD + ++     +    GS+L+T KS     + +
Sbjct: 60  VY-ELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEI 118

Query: 122 NTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKC----- 176
           +             ++       +L T S       LGS  Y ++ Y ++GL K      
Sbjct: 119 SVYSLIELTNTLKPLL--NNGASVL-TLSY------LGSTKY-MAHYNVMGLAKAALESA 168

Query: 177 ---LAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIAN 233
              LA +LG++ IRVN +S   + T ++  G  D  +I         L+ + +  + + N
Sbjct: 169 VRYLAVDLGKHHIRVNALSAGPIRT-LASSGIADFRMILKWNEINAPLR-KNVSLEEVGN 226

Query: 234 AALYLASDESSYVSGQNLVVDGGFSVV 260
           A +YL S  SS VSG+   VD G+ V+
Sbjct: 227 AGMYLLSSLSSGVSGEVHFVDAGYHVM 253

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* Length = 293

 Score = 94.2 bits (235), Expect = 5e-23
 Identities = 69/278 (24%), Positives = 113/278 (40%), Gaps = 58/278 (20%)

Query: 13  LEGKVAIITGGAS------GIGAMAVELFHENGAKVVIADVQDKLG---EDLADKLGQDV 63
           L+GK  +I G A+      GI     +   E GA++      D L    E LA++LG  V
Sbjct: 29  LQGKRGLILGVANNRSIAWGI----AKAAREAGAELAFTYQGDALKKRVEPLAEELGAFV 84

Query: 64  CYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLE-RLINVN 122
              HCD+++   +  + +T   K+GKLD + +          +I  + K +L  R I+  
Sbjct: 85  AG-HCDVADAASIDAVFETLEKKWGKLDFLVH----------AIGFSDKDELTGRYIDT- 132

Query: 123 TIGGFLGA------------KHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGI 170
           +   F               + A ++M     G IL T +        G+    +  Y +
Sbjct: 133 SEANFTNTMLISVYSLTAVSRRAEKLM--ADGGSIL-TLTY------YGA-EKVMPNYNV 182

Query: 171 LGLVKC--------LAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLK 222
           +G+ K         LA +LG   IRVN +S   + T ++  G  D   I         L+
Sbjct: 183 MGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKT-LAASGIGDFRYILKWNEYNAPLR 241

Query: 223 GEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVV 260
              +  D + +  LY  SD S  V+G+    D G+ V+
Sbjct: 242 -RTVTIDEVGDVGLYFLSDLSRSVTGEVHHADSGYHVI 278

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* Length = 266

 Score = 93.0 bits (232), Expect = 9e-23
 Identities = 69/279 (24%), Positives = 116/279 (41%), Gaps = 58/279 (20%)

Query: 13  LEGKVAIITGGAS------GIGAMAVELFHENGAKVVIADVQDKLG---EDLADKLGQDV 63
           LEG+  ++ G A+      GI        HE GA+++     ++L     +LA  L ++ 
Sbjct: 5   LEGRNIVVMGVANKRSIAWGI----ARSLHEAGARLIFTYAGERLEKSVHELAGTLDRND 60

Query: 64  CYI-HCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLE-RLINV 121
             I  CD++N+ E+     +   + G +  + +           I    K +L    +N 
Sbjct: 61  SIILPCDVTNDAEIETCFASIKEQVGVIHGIAH----------CIAFANKEELVGEYLNT 110

Query: 122 NTIGGFLGA------------KHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYG 169
               GFL A            K A  +M   + G I+ T +       LG     +  Y 
Sbjct: 111 -NRDGFLLAHNISSYSLTAVVKAARPMM--TEGGSIV-TLTY------LGG-ELVMPNYN 159

Query: 170 ILGLVKC--------LAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNL 221
           ++G+ K         LAA+LG+  IRVN +S   + T +S KG  D   I   + +   L
Sbjct: 160 VMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRT-LSAKGISDFNSILKDIEERAPL 218

Query: 222 KGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVV 260
           +      + + + A +L SD S  ++G+NL VD GF + 
Sbjct: 219 R-RTTTPEEVGDTAAFLFSDMSRGITGENLHVDSGFHIT 256

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score = 92.4 bits (230), Expect = 1e-22
 Identities = 38/200 (19%), Positives = 73/200 (36%), Gaps = 23/200 (11%)

Query: 16  KVAIITGGASGIGAMAVELFHENGAKV-VIADVQD-KLGEDLADKLGQDVCYIHCDISNE 73
              ++TG   GIG   V+   ++     +IA  +D +   +L       V  +   ++ +
Sbjct: 4   GSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCD 63

Query: 74  DEVINLVDTAVSKFG--KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFL--- 128
             +   V       G   L ++ NNAG+L  S+G+  +  ++ +   ++VNT    L   
Sbjct: 64  KSLDTFVSKVGEIVGSDGLSLLINNAGVLL-SYGTNTEPNRAVIAEQLDVNTTSVVLLTQ 122

Query: 129 --------GAKHAARVMVPQQKGCILFTASACTEIA-------GLGSPAYTISKYGILGL 173
                    A   +   +   +  ++  +S    I             AY +SK  I   
Sbjct: 123 KLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAINMF 182

Query: 174 VKCLAAELGQYGIRVNCVSP 193
            + LA +L    + V    P
Sbjct: 183 GRTLAVDLKDDNVLVVNFCP 202

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score = 92.0 bits (229), Expect = 3e-22
 Identities = 53/259 (20%), Positives = 88/259 (33%), Gaps = 36/259 (13%)

Query: 3   GPSSAAPFKRLEGKVAIITGGASGIGAMAVELFHENGAKV--VIADVQDKLGEDLADKL- 59
             SS    +       +ITG   G+G   V+           +    +++      + L 
Sbjct: 9   HHSSGLVPRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLA 68

Query: 60  --GQDVCYIHCDISNEDEVINLVDT--AVSKFGKLDIMYNNAGILDRSFGSILDTPKSDL 115
               ++  +  D+ N D    LV     V+K   L++++NNAGI  +S   I      +L
Sbjct: 69  KNHSNIHILEIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKS-ARITAVRSQEL 127

Query: 116 ERLINVNTIGGFL-----------GAKHAARVMVPQQKGCILFTASAC---TEIAGLGSP 161
              +  NT+   +            AK      +   +  I+  +S           G  
Sbjct: 128 LDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMY 187

Query: 162 AYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGL-ATGMSMKGGVDPAL-IESSMSQMG 219
           AY  SK  +    K L+ +L    I    + P G   T M   GG    L + +S  Q+ 
Sbjct: 188 AYRTSKSALNAATKSLSVDLYPQRIMCVSLHP-GWVKTDM---GGSSAPLDVPTSTGQIV 243

Query: 220 NL--------KGEFLKTDG 230
                      G F+  DG
Sbjct: 244 QTISKLGEKQNGGFVNYDG 262

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score = 88.6 bits (220), Expect = 5e-21
 Identities = 53/241 (21%), Positives = 86/241 (35%), Gaps = 63/241 (26%)

Query: 15  GKVAIITGGASGIG-AMAVELFHENGAKVVIA--DVQDKLGEDLADKL---GQDVCYIHC 68
             VA++TGG  GIG A+  +L       VV+   DV    G+    +L   G    +   
Sbjct: 4   IHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDV--TRGQAAVQQLQAEGLSPRFHQL 61

Query: 69  DISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSD-LERLINVNTIGGF 127
           DI +   +  L D    ++G LD++ NNAGI   +F     TP     E  +  N    F
Sbjct: 62  DIDDLQSIRALRDFLRKEYGGLDVLVNNAGI---AFKVADPTPFHIQAEVTMKTN----F 114

Query: 128 LGAKHAARVMVP--QQKGCILFTASAC--------------------------------- 152
            G +     ++P  + +G ++  +S                                   
Sbjct: 115 FGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKF 174

Query: 153 --------TEIAGLGSPAYTISKYGILGLVKCLAAEL----GQYGIRVNCVSPYGLATGM 200
                    +  G  S AY ++K G+  L +  A +L        I +N   P  + T M
Sbjct: 175 VEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDM 234

Query: 201 S 201
           +
Sbjct: 235 A 235

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score = 89.4 bits (222), Expect = 6e-21
 Identities = 39/198 (19%), Positives = 79/198 (39%), Gaps = 25/198 (12%)

Query: 16  KVAIITGGASGIGAMAVELFHENGAK--VVIA---DVQDKLGEDLADKLGQDVCY----- 65
            V +ITG +SGIG         + ++   V A   D++ +    L +      C      
Sbjct: 3   TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQ--GRLWEAARALACPPGSLE 60

Query: 66  -IHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTI 124
            +  D+ +   V    +      G++D++  NAG+     G +    +  +  +++VN  
Sbjct: 61  TLQLDVRDSKSVAAARERVT--EGRVDVLVCNAGL--GLLGPLEALGEDAVASVLDVN-- 114

Query: 125 GGFLGAKHAARVMVP----QQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAE 180
              +G     +  +P    +  G +L T S    +    +  Y  SK+ + GL + LA  
Sbjct: 115 --VVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVL 172

Query: 181 LGQYGIRVNCVSPYGLAT 198
           L  +G+ ++ +    + T
Sbjct: 173 LLPFGVHLSLIECGPVHT 190

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* Length = 315

 Score = 71.7 bits (176), Expect = 1e-14
 Identities = 57/303 (18%), Positives = 98/303 (32%), Gaps = 69/303 (22%)

Query: 13  LEGKVAIITGGAS--GIGAMAVELFHENGAKVVIADVQDKLG------------------ 52
           L G+ A + G A   G G    +     GA+V +      LG                  
Sbjct: 7   LRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLP 66

Query: 53  ----------EDLADKLGQDVCYIHCDISNEDE--------VINLVDTAVSKFGKLDIMY 94
                       L     +    +  DI +           +  +        G +DI+ 
Sbjct: 67  DGSLIEFAGVYPLDAAFDKPED-VPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILV 125

Query: 95  NNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTE 154
           ++          +L+T +       + +        +H   +M   + G  + T S    
Sbjct: 126 HSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPIM--NEGGSAV-TLSY--- 179

Query: 155 IAGLGS----PAYTISKYGILGLVKC--------LAAELG-QYGIRVNCVSPYGLAT--G 199
              L +    P Y     G +   K         LA E G +YG+RVN +S   L +   
Sbjct: 180 ---LAAERVVPGY----GGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAA 232

Query: 200 MSMKGGVDPALIESSMSQMGNLK--GEFLKTDGIANAALYLASDESSYVSGQNLVVDGGF 257
            ++    + + I+ ++    N       L +D +  AAL+L S  +  VSG  L VD G 
Sbjct: 233 SAIGKSGEKSFIDYAIDYSYNNAPLRRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGL 292

Query: 258 SVV 260
             +
Sbjct: 293 HAM 295

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291

 Score = 70.0 bits (172), Expect = 3e-14
 Identities = 25/94 (26%), Positives = 38/94 (40%), Gaps = 4/94 (4%)

Query: 6  SAAPFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCY 65
          +AA       +  +ITG  SG+GA+        GA V++A    + GE  A  +   V  
Sbjct: 7  TAADLPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEV 66

Query: 66 IHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGI 99
             D+ +       V          D++ NNAGI
Sbjct: 67 RELDLQDLSS----VRRFADGVSGADVLINNAGI 96

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* Length = 297

 Score = 66.7 bits (163), Expect = 6e-13
 Identities = 54/296 (18%), Positives = 94/296 (31%), Gaps = 61/296 (20%)

Query: 13  LEGKVAIITGGAS--GIGAMAVELFHENGAKVVIADVQDKLG------------------ 52
           L GK A I G A   G G    +     GA++++      L                   
Sbjct: 6   LRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLP 65

Query: 53  ----------EDLADKLGQDVCYIHCDI--------SNEDEVINLVDTAVSKFGKLDIMY 94
                       L          +  D+        S+   V    +     FG +DI+ 
Sbjct: 66  DGSLMEIKKVYPLDAVFDNPED-VPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILV 124

Query: 95  NNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTE 154
           ++          +L+T +      I+ ++        H   +M     G  + + +    
Sbjct: 125 HSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIM--NPGGASI-SLTY--- 178

Query: 155 IAGLGSPAYTISKYGIL-GLVKC--------LAAELG-QYGIRVNCVSPYGLATGMSMKG 204
              + S    I  YG      K         LA E G +  IRVN +S   L +  + K 
Sbjct: 179 ---IASER-IIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGS-RAAKA 233

Query: 205 GVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVV 260
                 +         ++ + L  D + NAA +L S  +S ++G  + VD G + +
Sbjct: 234 IGFIDTMIEYSYNNAPIQ-KTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNSM 288

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} Length = 319

 Score = 65.6 bits (160), Expect = 1e-12
 Identities = 55/313 (17%), Positives = 102/313 (32%), Gaps = 76/313 (24%)

Query: 13  LEGKVAIITGGAS--GIGAMAVELFHENGAKVVI-------------------------- 44
           L GK A + G A   G G    +L    GA+V++                          
Sbjct: 7   LRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYA 66

Query: 45  ---------------ADVQDKLGEDLADKLGQDVCYIHCDISNEDE--------VINLVD 81
                           D+       L          +  ++S+           +  + +
Sbjct: 67  QEPSSKVAAEAAEKPVDLVFDKIYPLDAVFDTPQD-VPPEVSSNKRYAGVGGFTISEVAE 125

Query: 82  TAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ 141
              +  G++DI+ ++          +L T +      ++ ++       +H   +M  ++
Sbjct: 126 AVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSSSYSFVSLLQHFLPLM--KE 183

Query: 142 KGCILFTASACTEIAGLGSPAYTISKYGIL-GLVKC--------LAAELGQ-YGIRVNCV 191
            G  L   S       + S    I  YG      K         LA E G+   +RVNC+
Sbjct: 184 GGSAL-ALSY------IASEK-VIPGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCI 235

Query: 192 SPYGLAT--GMSMKGGVDPALIESSMSQMGNLK--GEFLKTDGIANAALYLASDESSYVS 247
           S   L +    ++    D   I+ ++          + L++D +  AAL+L S  +  V+
Sbjct: 236 SAGPLKSRAASAIGKAGDKTFIDLAIDYSEANAPLQKELESDDVGRAALFLLSPLARAVT 295

Query: 248 GQNLVVDGGFSVV 260
           G  L VD G   +
Sbjct: 296 GATLYVDNGLHAM 308

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... Length = 329

 Score = 55.7 bits (134), Expect = 3e-09
 Identities = 42/337 (12%), Positives = 92/337 (27%), Gaps = 104/337 (30%)

Query: 15  GKVAIITGGAS--GIGAMAVELFHENGAKVVIADVQDKLG----------------EDLA 56
             +  I G     G G    +   +   K++                          D  
Sbjct: 2   EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKD 61

Query: 57  DKLGQDVCY-------------------IHCDISNEDEVINLVDTAVSKFGKLDIMYNNA 97
            K+                            ++     + ++ +    K+GK++++ ++ 
Sbjct: 62  KKMNILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSL 121

Query: 98  GILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAG 157
                    +L+T +      ++ ++       K+   +M  + +  I+ + +       
Sbjct: 122 ANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM--KPQSSII-SLTY------ 172

Query: 158 LGS----PAYTISKYGILGLVKC--------LAAELG-QYGIRVNCVSP--------YGL 196
             S    P Y     G +   K         LA  LG  Y IR+N +S           +
Sbjct: 173 HASQKVVPGY----GGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAI 228

Query: 197 ATGMSMKGGVDPALIESSMSQMGNLKGEF------------------------------- 225
               +            +   + N+                                   
Sbjct: 229 NKLNNTYENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLR 288

Query: 226 --LKTDGIANAALYLASDESSYVSGQNLVVDGGFSVV 260
             L +  I + A +L S ES  ++GQ + VD G +++
Sbjct: 289 QKLLSTDIGSVASFLLSRESRAITGQTIYVDNGLNIM 325

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287

 Score = 53.7 bits (129), Expect = 1e-08
 Identities = 27/163 (16%), Positives = 53/163 (32%), Gaps = 15/163 (9%)

Query: 13  LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQ--DVCYIHCDI 70
           ++GK A++  G   +G  +  L    GA+VV+   +    +  AD + +   V     + 
Sbjct: 117 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAET 176

Query: 71  SNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGA 130
           +++      V  A         ++    I            +S +E + + N        
Sbjct: 177 ADDASRAEAVKGA-------HFVFTAGAIGLELLPQAAWQNESSIEIVADYNAQPPLGIG 229

Query: 131 KHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGL 173
              A     +  G   F A       G+G     + +  I  L
Sbjct: 230 GIDATDKGKEYGGKRAFGA------LGIGGLKLKLHRACIAKL 266

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} Length = 422

 Score = 45.5 bits (107), Expect = 8e-06
 Identities = 44/294 (14%), Positives = 83/294 (28%), Gaps = 56/294 (19%)

Query: 15  GKVAIITGGASGIG-AMAVELFHENGAKVVI---------------ADVQDKLGEDLADK 58
            K  ++ G +SG G A  +      GA  +                        +  A  
Sbjct: 61  PKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKA 120

Query: 59  LGQDVCYIHCDISNEDEVINLVDTAVSKFG-KLDIMYNNAGILDRSFGSILDTPKSDLER 117
            G     I+ D  ++     +++   ++ G ++D++  +     R      +  +S L+ 
Sbjct: 121 AGLYSKSINGDAFSDAARAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKP 180

Query: 118 LINVNTIGGF--------------------------LGAKHAARVMVPQQKGCILFTASA 151
           +    T                              +G +     +   +   +L   + 
Sbjct: 181 IGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGGQDWELWIDALEGAGVLADGAR 240

Query: 152 CTEIAGLGSP-AYTISKYGILGLVKC--------LAAELGQYGIRVNCVSPYGLATGMSM 202
               + +G+   + I  +G LG  K         L A L ++G   N      + T  S 
Sbjct: 241 SVAFSYIGTEITWPIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVTQASA 300

Query: 203 KGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGG 256
              V P  I      M     E    +G       L  +      GQ   VD  
Sbjct: 301 AIPVMPLYISMVYKIM----KEKGLHEGTIEQLDRLFRERLYRQDGQPAEVDEQ 350

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} Length = 349

 Score = 42.2 bits (100), Expect = 8e-05
 Identities = 11/52 (21%), Positives = 21/52 (40%), Gaps = 3/52 (5%)

Query: 14  EGKVAIITGGASGIGAMAVELFHENGAKV-VIADVQDKLGEDLADKLGQDVC 64
             K  ++T GAS +  + + L  E G +  V     +++   L   +G    
Sbjct: 164 GEKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQI--ALLKDIGAAHV 213

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267

 Score = 41.2 bits (97), Expect = 2e-04
 Identities = 19/92 (20%), Positives = 37/92 (40%), Gaps = 14/92 (15%)

Query: 20  ITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINL 79
           +TG A  +G +  E        + +AD+         D  G +   + CD+++ + V  +
Sbjct: 8   VTGAAGQLGRVMRERLAPMAEILRLADLSP------LDPAGPNEECVQCDLADANAVNAM 61

Query: 80  VDTAVSKFGKLDIMYNNAGI-LDRSFGSILDT 110
           V          D + +  GI +++ F  IL  
Sbjct: 62  VAGC-------DGIVHLGGISVEKPFEQILQG 86

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A Length = 450

 Score = 40.7 bits (94), Expect = 3e-04
 Identities = 11/65 (16%), Positives = 30/65 (46%), Gaps = 3/65 (4%)

Query: 16 KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDE 75
           V ++  G+  +    +++  ++G KV +A    +  + L+  + Q    I  D++++  
Sbjct: 5  SVLML--GSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV-QHSTPISLDVNDDAA 61

Query: 76 VINLV 80
          +   V
Sbjct: 62 LDAEV 66

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512

 Score = 40.3 bits (94), Expect = 5e-04
 Identities = 19/107 (17%), Positives = 37/107 (34%), Gaps = 11/107 (10%)

Query: 3    GPSSAAPFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVI--------ADVQDKLGED 54
                +  F        +ITGG  G G    +     GA+ ++           Q +   +
Sbjct: 1873 LTGLSKTFCPPHKSY-VITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVRE 1931

Query: 55   LADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILD 101
                 G  V     + S+ D   +L+    ++ G +  ++N A +L 
Sbjct: 1932 WRR-QGVQVLVSTSNASSLDGARSLIT-EATQLGPVGGVFNLAMVLR 1976

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	272
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	100.0
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	100.0
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	100.0
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	100.0
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	100.0
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	100.0
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	100.0
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	100.0
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	100.0
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	100.0
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	100.0
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	100.0
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	100.0
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	100.0
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
4dqx_A	277	Probable oxidoreductase protein; structural genomi	100.0
3rih_A	293	Short chain dehydrogenase or reductase; structural	100.0
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	100.0
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	100.0
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	100.0
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	100.0
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	100.0
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	100.0
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	100.0
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	100.0
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	100.0
3imf_A	257	Short chain dehydrogenase; structural genomics, in	100.0
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	100.0
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	100.0
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	100.0
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	100.0
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	100.0
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	100.0
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	100.0
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	100.0
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	100.0
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	100.0
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	100.0
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	100.0
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	100.0
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	100.0
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	100.0
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	100.0
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	100.0
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	100.0
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	100.0
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	100.0
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	100.0
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	100.0
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	100.0
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	100.0
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	100.0
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	100.0
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	100.0
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	100.0
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	100.0
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	100.0
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	100.0
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	100.0
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	100.0
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	100.0
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	100.0
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	100.0
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	100.0
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	100.0
3cxt_A	291	Dehydrogenase with different specificities; rossma	100.0
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	100.0
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	100.0
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	100.0
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	100.0
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	100.0
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	100.0
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	100.0
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	100.0
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	100.0
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	100.0
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	100.0
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	100.0
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	100.0
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	100.0
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	100.0
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	100.0
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	100.0
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	100.0
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	100.0
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	100.0
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	100.0
1spx_A	278	Short-chain reductase family member (5L265); paral	100.0
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	100.0
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	100.0
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	100.0
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	100.0
1xhl_A	297	Short-chain dehydrogenase/reductase family member	100.0
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	100.0
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	100.0
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	100.0
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	100.0
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	100.0
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	100.0
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	100.0
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	100.0
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	100.0
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
1xkq_A	280	Short-chain reductase family member (5D234); parra	100.0
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	100.0
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	100.0
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	100.0
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	100.0
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	100.0
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	100.0
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	100.0
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	100.0
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	100.0
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	100.0
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	100.0
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	100.0
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	100.0
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	100.0
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	100.0
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	100.0
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	100.0
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	100.0
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	100.0
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	100.0
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	100.0
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	100.0
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	100.0
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	100.0
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	100.0
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	100.0
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	100.0
4e4y_A	244	Short chain dehydrogenase family protein; structur	100.0
1xq1_A	266	Putative tropinone reducatse; structural genomics,	100.0
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	100.0
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	100.0
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	100.0
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	100.0
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	100.0
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	100.0
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	100.0
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	100.0
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	100.0
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	100.0
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	100.0
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	100.0
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	100.0
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	100.0
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	100.0
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	100.0
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	100.0
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	100.0
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	100.0
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	100.0
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	100.0
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	100.0
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	100.0
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	100.0
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	100.0
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	100.0
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	100.0
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	100.0
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	100.0
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	100.0
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	100.0
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	100.0
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	100.0
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	100.0
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	100.0
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	100.0
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	100.0
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	100.0
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	100.0
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	100.0
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	100.0
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	100.0
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	100.0
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	100.0
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	100.0
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	100.0
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	100.0
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	100.0
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	100.0
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	100.0
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	100.0
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	100.0
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	100.0
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	100.0
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	100.0
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	100.0
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	100.0
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	100.0
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	100.0
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	100.0
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	100.0
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	100.0
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	100.0
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	100.0
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	100.0
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	100.0
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	100.0
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.97
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.97
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.97
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.96
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.96
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.96
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.95
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.95
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.95
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.95
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.95
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.94
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.94
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.94
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.94
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.94
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.94
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.94
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.94
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.94
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.94
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.93
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.93
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.93
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.93
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.93
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.93
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.93
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.93
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.93
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.93
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.92
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.92
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.92
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.92
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.92
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.92
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.92
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.92
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.92
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.92
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.91
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.91
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.91
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.91
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.91
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.91
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.91
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.91
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.91
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.91
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.91
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.9
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.9
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.9
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.9
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.9
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.9
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.9
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.9
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.89
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.89
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.89
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.89
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.89
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.88
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.88
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.88
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.88
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.88
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.87
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.87
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.86
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.86
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.86
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.86
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.86
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.85
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.85
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.84
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.84
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.84
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.82
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.81
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.81
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.79
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.78
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.76
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.76
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.75
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.75
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.73
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.71
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.69
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.67
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.59
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.37
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.3
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	99.2
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	99.02
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	99.0
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	98.83
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.78
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.71
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.69
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	98.68
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.68
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.66
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	98.61
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.6
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.5
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	98.49
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.47
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	98.46
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.46
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.46
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	98.45
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.43
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.41
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	98.41
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.41
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	98.38
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.38
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	98.38
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	98.37
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.28
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	98.22
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	98.18
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	98.18
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	98.17
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	98.15
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	98.14
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	98.13
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	98.12
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	98.11
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.1
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	98.09
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	98.06
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	98.05
3gms_A	340	Putative NADPH:quinone reductase; structural genom	98.04
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	98.02
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.98
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.95
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.92
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.91
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.91
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.9
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	97.88
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.85
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	97.81
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.81
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.78
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.78
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.73
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.73
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.72
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.72
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.72
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.71
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.7
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	97.69
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	97.62
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.62
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	97.6
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	97.55
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.54
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	97.51
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.48
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	97.47
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.46
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	97.4
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	97.39
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.36
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	97.35
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	97.34
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	97.33
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	97.32
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	97.31
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	97.29
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	97.29
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	97.28
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	97.27
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	97.25
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	97.22
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	97.21
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	97.2
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	97.19
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	97.16
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	97.16
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	97.15
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	97.13
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	97.13
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	97.12
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	97.11
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	97.1
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	97.09
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	97.08
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	97.08
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	97.03
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	97.03
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	97.03
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	97.02
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	97.01
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	97.0
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	96.99
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	96.98
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	96.97
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	96.97
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	96.96
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	96.93
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	96.89
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	96.86
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	96.81
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	96.8
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	96.79
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	96.78
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	96.76
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	96.73
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	96.69
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	96.65
3tl2_A	315	Malate dehydrogenase; center for structural genomi	96.65
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	96.63
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	96.62
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	96.61
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	96.6
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	96.57
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.54
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	96.53
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	96.5
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	96.49
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	96.48
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	96.48
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	96.45
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	96.45
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	96.43
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	96.42
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	96.36
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	96.32
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	96.26
1lnq_A	336	MTHK channels, potassium channel related protein;	96.25
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	96.2
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	96.2
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	96.19
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	96.17
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	96.17
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	96.15
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	96.13
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	96.13
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	96.1
4g65_A	461	TRK system potassium uptake protein TRKA; structur	96.09
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	96.05
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	96.0
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	95.99
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	95.96
3l07_A	285	Bifunctional protein fold; structural genomics, ID	95.89
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	95.86
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	95.84
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	95.81
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	95.73
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	95.73
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	95.67
2c2x_A	281	Methylenetetrahydrofolate dehydrogenase- methenylt	95.61
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	95.59
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	95.59
3aoe_E	419	Glutamate dehydrogenase; rossmann fold, NADH, oxid	95.58
3dtt_A	245	NADP oxidoreductase; structural genomics, joint ce	95.55
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	95.54
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	95.54
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	95.53
1pjz_A	203	Thiopurine S-methyltransferase; polymorphism, S-ad	95.51
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	95.47
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	95.46
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	95.44
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	95.4
3s2u_A	365	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape	95.4
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	95.37
1npy_A	271	Hypothetical shikimate 5-dehydrogenase-like protei	95.36
3pp8_A	315	Glyoxylate/hydroxypyruvate reductase A; structural	95.36
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	95.35
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	95.33
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	95.31

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=100.00  E-value=9.7e-61  Score=401.41  Aligned_cols=249  Identities=31%  Similarity=0.539  Sum_probs=225.8

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (272)
                      +++|+||++|||||++|||++++++|+++|++|++++|+++.+++..+++   +.++.++++|++|+++++++++++.++
T Consensus         2 y~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   81 (254)
T 4fn4_A            2 YQSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFET   81 (254)
T ss_dssp             CGGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            56899999999999999999999999999999999999998888777665   678999999999999999999999999


Q ss_pred             hCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhh
Q 024145           87 FGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTIS  166 (272)
Q Consensus        87 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~s  166 (272)
                      +|++|+||||||+... ..++.+.+.++|++++++|+.++|.++|+++|+|+++++|+||++||..+..+.++..+|++|
T Consensus        82 ~G~iDiLVNNAGi~~~-~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~~~~~~Y~as  160 (254)
T 4fn4_A           82 YSRIDVLCNNAGIMDG-VTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVA  160 (254)
T ss_dssp             HSCCCEEEECCCCCCT-TCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSSSSCHHHHHH
T ss_pred             cCCCCEEEECCcccCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCCCCChHHHHH
Confidence            9999999999997653 267899999999999999999999999999999999889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCc
Q 024145          167 KYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYV  246 (272)
Q Consensus       167 K~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  246 (272)
                      |+|+.+|+|++|.|++++|||||+|+||+++||+........+...+......++.+|+.+|||+|++++||+|++++|+
T Consensus       161 Kaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~R~g~pediA~~v~fLaSd~a~~i  240 (254)
T 4fn4_A          161 KHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPEDIANVIVFLASDEASFV  240 (254)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHHTTCCCCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCchhcCC
Confidence            99999999999999999999999999999999998755444443333333333344899999999999999999999999


Q ss_pred             cccEEEecCceee
Q 024145          247 SGQNLVVDGGFSV  259 (272)
Q Consensus       247 ~G~~i~~dgG~~~  259 (272)
                      |||+|.||||+++
T Consensus       241 TG~~i~VDGG~t~  253 (254)
T 4fn4_A          241 NGDAVVVDGGLTV  253 (254)
T ss_dssp             CSCEEEESTTGGG
T ss_pred             cCCEEEeCCCccc
Confidence            9999999999876

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=100.00  E-value=2.3e-59  Score=393.24  Aligned_cols=247  Identities=27%  Similarity=0.386  Sum_probs=225.7

Q ss_pred             cCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHH
Q 024145            9 PFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVS   85 (272)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (272)
                      .+++|+||++|||||++|||++++++|+++|++|++++|+++.+++..+++   +.++.++++|++|+++++++++++.+
T Consensus         3 ~~f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~   82 (255)
T 4g81_D            3 ALFDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDA   82 (255)
T ss_dssp             CTTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHH
T ss_pred             CCcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999999998887777665   56899999999999999999999999


Q ss_pred             HhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcC-CCCceEEEEecccccccCCCCchhh
Q 024145           86 KFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVP-QQKGCILFTASACTEIAGLGSPAYT  164 (272)
Q Consensus        86 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~g~iv~iss~~~~~~~~~~~~Y~  164 (272)
                      ++|++|+||||||+...  .++.+.+.++|++++++|+.++|.++|+++|+|.+ +++|+||++||..+..+.++...|+
T Consensus        83 ~~G~iDiLVNNAG~~~~--~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~~~~~Y~  160 (255)
T 4g81_D           83 EGIHVDILINNAGIQYR--KPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYT  160 (255)
T ss_dssp             TTCCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCTTCHHHH
T ss_pred             HCCCCcEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCCCchhHH
Confidence            99999999999998766  88999999999999999999999999999999975 4679999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCC
Q 024145          165 ISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESS  244 (272)
Q Consensus       165 ~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  244 (272)
                      +||+|+.+|+|++|.|++++|||||+|+||+++||+...... .++..+.+....|+ +|+.+|||+|++++||+|++++
T Consensus       161 asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~-~~~~~~~~~~~~Pl-~R~g~pediA~~v~fL~S~~a~  238 (255)
T 4g81_D          161 AAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIE-DKQFDSWVKSSTPS-QRWGRPEELIGTAIFLSSKASD  238 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHT-CHHHHHHHHHHSTT-CSCBCGGGGHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccC-CHHHHHHHHhCCCC-CCCcCHHHHHHHHHHHhCchhC
Confidence            999999999999999999999999999999999999764222 23444455555666 8999999999999999999999


Q ss_pred             CccccEEEecCceee
Q 024145          245 YVSGQNLVVDGGFSV  259 (272)
Q Consensus       245 ~~~G~~i~~dgG~~~  259 (272)
                      |+|||+|.||||++.
T Consensus       239 ~iTG~~i~VDGG~~A  253 (255)
T 4g81_D          239 YINGQIIYVDGGWLA  253 (255)
T ss_dssp             TCCSCEEEESTTGGG
T ss_pred             CCcCCEEEECCCeEe
Confidence            999999999999864

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=100.00  E-value=9.7e-58  Score=386.76  Aligned_cols=243  Identities=26%  Similarity=0.387  Sum_probs=218.1

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   91 (272)
                      +|+||++|||||++|||++++++|+++|++|++++|+++.+++..++++.++..+++|++|+++++++++++.+++|++|
T Consensus        26 rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD  105 (273)
T 4fgs_A           26 RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRID  105 (273)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEE
T ss_pred             hhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            58999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHHH
Q 024145           92 IMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGIL  171 (272)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~  171 (272)
                      +||||||+...  .++.+.+.++|++++++|+.++|.++|+++|+|.+  .|+||++||..+..+.+....|++||+|+.
T Consensus       106 iLVNNAG~~~~--~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~--~G~IInisS~~~~~~~~~~~~Y~asKaav~  181 (273)
T 4fgs_A          106 VLFVNAGGGSM--LPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLAR--GSSVVLTGSTAGSTGTPAFSVYAASKAALR  181 (273)
T ss_dssp             EEEECCCCCCC--CCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEECCGGGGSCCTTCHHHHHHHHHHH
T ss_pred             EEEECCCCCCC--CChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhh--CCeEEEEeehhhccCCCCchHHHHHHHHHH
Confidence            99999998765  78999999999999999999999999999999964  589999999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCC-hh---HHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCcc
Q 024145          172 GLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVD-PA---LIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVS  247 (272)
Q Consensus       172 ~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  247 (272)
                      +|+|++|.|++++|||||+|+||+++||+....... +.   ...+.+....|+ +|+.+|||+|++++||+|++++|+|
T Consensus       182 ~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~Pl-gR~g~peeiA~~v~FLaSd~a~~iT  260 (273)
T 4fgs_A          182 SFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPM-GRVGRAEEVAAAALFLASDDSSFVT  260 (273)
T ss_dssp             HHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTT-SSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCchhcCcc
Confidence            999999999999999999999999999987653222 21   222334445666 8999999999999999999999999


Q ss_pred             ccEEEecCceee
Q 024145          248 GQNLVVDGGFSV  259 (272)
Q Consensus       248 G~~i~~dgG~~~  259 (272)
                      ||+|.||||.+.
T Consensus       261 G~~i~VDGG~s~  272 (273)
T 4fgs_A          261 GAELFVDGGSAQ  272 (273)
T ss_dssp             SCEEEESTTTTT
T ss_pred             CCeEeECcChhh
Confidence            999999999763

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=100.00  E-value=1.5e-57  Score=379.06  Aligned_cols=241  Identities=28%  Similarity=0.388  Sum_probs=212.7

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcch-HHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKL-GEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      .++|+||++|||||++|||++++++|+++|++|++++|+... ..+..++.+.++.++.+|++|+++++++++     ++
T Consensus         4 ~f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~-----~g   78 (247)
T 4hp8_A            4 PFSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFADPLAAKDSFT-----DA   78 (247)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTTTTTSST-----TT
T ss_pred             CcCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHH-----hC
Confidence            368999999999999999999999999999999999998642 233445557889999999999999877664     57


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCC-CCceEEEEecccccccCCCCchhhhhH
Q 024145           89 KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQ-QKGCILFTASACTEIAGLGSPAYTISK  167 (272)
Q Consensus        89 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~iss~~~~~~~~~~~~Y~~sK  167 (272)
                      ++|+||||||+...  .++.+.++++|++++++|+.++|.++|+++|+|.++ +.|+||++||..+..+.++...|++||
T Consensus        79 ~iDiLVNNAGi~~~--~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~~~~Y~asK  156 (247)
T 4hp8_A           79 GFDILVNNAGIIRR--ADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVPSYTAAK  156 (247)
T ss_dssp             CCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSSCHHHHHHH
T ss_pred             CCCEEEECCCCCCC--CCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCCChHHHHHH
Confidence            99999999998766  789999999999999999999999999999999766 479999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCcc
Q 024145          168 YGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVS  247 (272)
Q Consensus       168 ~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  247 (272)
                      +|+.+|+|++|.|++++|||||+|+||+++||+.+.....+ ...+.+....|+ +|+.+|||+|++++||+|++++|+|
T Consensus       157 aav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~-~~~~~~~~~~Pl-gR~g~peeiA~~v~fLaSd~a~~iT  234 (247)
T 4hp8_A          157 HGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRADA-ARNKAILERIPA-GRWGHSEDIAGAAVFLSSAAADYVH  234 (247)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSH-HHHHHHHTTCTT-SSCBCTHHHHHHHHHHTSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccCH-HHHHHHHhCCCC-CCCcCHHHHHHHHHHHhCchhcCCc
Confidence            99999999999999999999999999999999986422222 233334445566 9999999999999999999999999


Q ss_pred             ccEEEecCceee
Q 024145          248 GQNLVVDGGFSV  259 (272)
Q Consensus       248 G~~i~~dgG~~~  259 (272)
                      ||+|.||||++.
T Consensus       235 G~~i~VDGG~~A  246 (247)
T 4hp8_A          235 GAILNVDGGWLA  246 (247)
T ss_dssp             SCEEEESTTGGG
T ss_pred             CCeEEECccccc
Confidence            999999999865

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=100.00  E-value=3.6e-56  Score=375.23  Aligned_cols=250  Identities=26%  Similarity=0.346  Sum_probs=216.2

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHH--HHhCCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLA--DKLGQDVCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      ++|+||++|||||++|||++++++|+++|++|++++|+.+..+...  .+.+.++.++.+|++|+++++++++++.+++|
T Consensus         3 ~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G   82 (258)
T 4gkb_A            3 LNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFG   82 (258)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhC
Confidence            5789999999999999999999999999999999999887654332  33467899999999999999999999999999


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHH
Q 024145           89 KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKY  168 (272)
Q Consensus        89 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~  168 (272)
                      ++|+||||||+...   ...+.+.++|++++++|+.++|.++|+++|+|++ ++|+||++||..+..+.+....|++||+
T Consensus        83 ~iDiLVNnAGi~~~---~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~-~~G~IVnisS~~~~~~~~~~~~Y~asKa  158 (258)
T 4gkb_A           83 RLDGLVNNAGVNDG---IGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKA-TRGAIVNISSKTAVTGQGNTSGYCASKG  158 (258)
T ss_dssp             CCCEEEECCCCCCC---CCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HTCEEEEECCTHHHHCCSSCHHHHHHHH
T ss_pred             CCCEEEECCCCCCC---CCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-cCCeEEEEeehhhccCCCCchHHHHHHH
Confidence            99999999998643   3457899999999999999999999999999975 4699999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCC---hhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCC
Q 024145          169 GILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVD---PALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSY  245 (272)
Q Consensus       169 a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  245 (272)
                      |+.+|+|++|.|++++|||||+|+||+++||+.+.....   ++...+......|+.+|+.+|||+|++++||+|++++|
T Consensus       159 av~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plg~R~g~peeiA~~v~fLaS~~a~~  238 (258)
T 4gkb_A          159 AQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPLGRRFTTPDEIADTAVFLLSPRASH  238 (258)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCchhcC
Confidence            999999999999999999999999999999998753221   22223333444555458999999999999999999999


Q ss_pred             ccccEEEecCceeeccCcc
Q 024145          246 VSGQNLVVDGGFSVVNPTV  264 (272)
Q Consensus       246 ~~G~~i~~dgG~~~~~~~~  264 (272)
                      +|||+|.||||++..++.+
T Consensus       239 iTG~~i~VDGG~T~l~~s~  257 (258)
T 4gkb_A          239 TTGEWLFVDGGYTHLDRAL  257 (258)
T ss_dssp             CCSCEEEESTTTTTSCTTC
T ss_pred             ccCCeEEECCCcchhhhhh
Confidence            9999999999998766553

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=100.00  E-value=1.4e-55  Score=366.36  Aligned_cols=233  Identities=28%  Similarity=0.401  Sum_probs=203.8

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDI   92 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   92 (272)
                      ++||++|||||++|||++++++|+++|++|++++|+.+..++   ..+.++..+++|++|+++++++++    ++|++|+
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~---~~~~~~~~~~~Dv~~~~~v~~~~~----~~g~iDi   81 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHA---PRHPRIRREELDITDSQRLQRLFE----ALPRLDV   81 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTS---CCCTTEEEEECCTTCHHHHHHHHH----HCSCCSE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhh---hhcCCeEEEEecCCCHHHHHHHHH----hcCCCCE
Confidence            589999999999999999999999999999999998776542   234679999999999999887664    5799999


Q ss_pred             EEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHHHH
Q 024145           93 MYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILG  172 (272)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~  172 (272)
                      ||||||+.    .++.+.+.++|++++++|+.++|.++|+++|+|++ ++|+||++||..+..+.++...|++||+|+.+
T Consensus        82 LVNNAGi~----~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~-~~G~IVnisS~~~~~~~~~~~~Y~asKaav~~  156 (242)
T 4b79_A           82 LVNNAGIS----RDREEYDLATFERVLRLNLSAAMLASQLARPLLAQ-RGGSILNIASMYSTFGSADRPAYSASKGAIVQ  156 (242)
T ss_dssp             EEECCCCC----CGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HCEEEEEECCGGGTSCCSSCHHHHHHHHHHHH
T ss_pred             EEECCCCC----CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH-cCCeEEEEeeccccCCCCCCHHHHHHHHHHHH
Confidence            99999985    34678899999999999999999999999999975 46999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccccEEE
Q 024145          173 LVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLV  252 (272)
Q Consensus       173 ~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~  252 (272)
                      |+|++|.|++++|||||+|+||+++|||.......++...+ +....|+ +|+.+|||+|++++||+|++++|+|||+|.
T Consensus       157 ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~~~~~~~-~~~~~Pl-gR~g~peeiA~~v~fLaSd~a~~iTG~~l~  234 (242)
T 4b79_A          157 LTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKADVEATRR-IMQRTPL-ARWGEAPEVASAAAFLCGPGASFVTGAVLA  234 (242)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBCCC-----CCCHHHHHH-HHHTCTT-CSCBCHHHHHHHHHHHTSGGGTTCCSCEEE
T ss_pred             HHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCCHHHHHH-HHhcCCC-CCCcCHHHHHHHHHHHhCchhcCccCceEE
Confidence            99999999999999999999999999998754444444333 3444566 899999999999999999999999999999


Q ss_pred             ecCceee
Q 024145          253 VDGGFSV  259 (272)
Q Consensus       253 ~dgG~~~  259 (272)
                      ||||+..
T Consensus       235 VDGG~la  241 (242)
T 4b79_A          235 VDGGYLC  241 (242)
T ss_dssp             ESTTGGG
T ss_pred             ECccHhh
Confidence            9999754

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=100.00  E-value=4.1e-54  Score=363.84  Aligned_cols=247  Identities=25%  Similarity=0.300  Sum_probs=219.4

Q ss_pred             CCCCCCcEEEEeCCCC--hHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---C-CceEEEEecCCCHHHHHHHHHHH
Q 024145           10 FKRLEGKVAIITGGAS--GIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---G-QDVCYIHCDISNEDEVINLVDTA   83 (272)
Q Consensus        10 ~~~l~~k~vlItGas~--giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~D~~~~~~~~~~~~~~   83 (272)
                      |++|+||++|||||++  |||++++++|+++|++|++++|+++..+++.+.+   + .++.++++|++++++++++++++
T Consensus         1 M~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   80 (256)
T 4fs3_A            1 MLNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQI   80 (256)
T ss_dssp             CCCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHH
Confidence            6789999999999875  9999999999999999999999988777666544   3 47899999999999999999999


Q ss_pred             HHHhCCccEEEeCCCCCCC--CCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCc
Q 024145           84 VSKFGKLDIMYNNAGILDR--SFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSP  161 (272)
Q Consensus        84 ~~~~g~id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  161 (272)
                      .+++|++|+||||||+...  ....+.+.+.++|...+++|+.+++.+++.+.+++.  ++|+||++||..+..+.+++.
T Consensus        81 ~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~--~~G~IVnisS~~~~~~~~~~~  158 (256)
T 4fs3_A           81 GKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMP--EGGSIVATTYLGGEFAVQNYN  158 (256)
T ss_dssp             HHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCT--TCEEEEEEECGGGTSCCTTTH
T ss_pred             HHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhc--cCCEEEEEeccccccCcccch
Confidence            9999999999999998653  224667889999999999999999999999988774  469999999999999999999


Q ss_pred             hhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcC
Q 024145          162 AYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASD  241 (272)
Q Consensus       162 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  241 (272)
                      .|++||+|+.+|+|++|.|++++|||||+|+||+++|++.+.... .++..+.+....|+ +|+.+|||+|++++||+|+
T Consensus       159 ~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~-~~~~~~~~~~~~Pl-~R~g~peevA~~v~fL~Sd  236 (256)
T 4fs3_A          159 VMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGG-FNTILKEIKERAPL-KRNVDQVEVGKTAAYLLSD  236 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTT-HHHHHHHHHHHSTT-SSCCCHHHHHHHHHHHHSG
T ss_pred             hhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccC-CHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCc
Confidence            999999999999999999999999999999999999999875332 33334444455666 8999999999999999999


Q ss_pred             CCCCccccEEEecCceeec
Q 024145          242 ESSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       242 ~~~~~~G~~i~~dgG~~~~  260 (272)
                      +++|+|||+|.||||++..
T Consensus       237 ~a~~iTG~~i~VDGG~~av  255 (256)
T 4fs3_A          237 LSSGVTGENIHVDSGFHAI  255 (256)
T ss_dssp             GGTTCCSCEEEESTTGGGC
T ss_pred             hhcCccCCEEEECcCHHhc
Confidence            9999999999999999764

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=100.00  E-value=2.1e-54  Score=361.51  Aligned_cols=231  Identities=26%  Similarity=0.405  Sum_probs=208.2

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEE
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMY   94 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv   94 (272)
                      +|++|||||++|||++++++|+++|++|++++|+++..+++.++. .++.++++|++|+++++++++++.+++|++|+||
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLV   80 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKER-PNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLV   80 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTC-TTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-CCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            489999999999999999999999999999999988877766553 5788999999999999999999999999999999


Q ss_pred             eCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHHHHHH
Q 024145           95 NNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLV  174 (272)
Q Consensus        95 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~~  174 (272)
                      ||||+...  .++.+.+.++|++++++|+.++|.++|++.|+|.++ +|+||++||..+..+.++...|++||+|+.+|+
T Consensus        81 NNAG~~~~--~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~-~G~IInisS~~~~~~~~~~~~Y~asKaal~~lt  157 (247)
T 3ged_A           81 NNACRGSK--GILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKN-KGRIINIASTRAFQSEPDSEAYASAKGGIVALT  157 (247)
T ss_dssp             ECCCCCCC--CGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHH
T ss_pred             ECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-CCcEEEEeecccccCCCCCHHHHHHHHHHHHHH
Confidence            99998766  789999999999999999999999999999999874 599999999999999999999999999999999


Q ss_pred             HHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccccEEEec
Q 024145          175 KCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVD  254 (272)
Q Consensus       175 ~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~d  254 (272)
                      |++|.|+++ |||||+|+||+++|++....   .+   + .....|+ +|+.+|||+|++++||+|+  +|+|||+|.||
T Consensus       158 k~lA~ela~-~IrVN~I~PG~i~t~~~~~~---~~---~-~~~~~Pl-~R~g~pediA~~v~fL~s~--~~iTG~~i~VD  226 (247)
T 3ged_A          158 HALAMSLGP-DVLVNCIAPGWINVTEQQEF---TQ---E-DCAAIPA-GKVGTPKDISNMVLFLCQQ--DFITGETIIVD  226 (247)
T ss_dssp             HHHHHHHTT-TSEEEEEEECSBCCCC---C---CH---H-HHHTSTT-SSCBCHHHHHHHHHHHHHC--SSCCSCEEEES
T ss_pred             HHHHHHHCC-CCEEEEEecCcCCCCCcHHH---HH---H-HHhcCCC-CCCcCHHHHHHHHHHHHhC--CCCCCCeEEEC
Confidence            999999997 99999999999999987631   11   2 2233455 8999999999999999984  69999999999


Q ss_pred             Cceeec
Q 024145          255 GGFSVV  260 (272)
Q Consensus       255 gG~~~~  260 (272)
                      ||++..
T Consensus       227 GG~s~r  232 (247)
T 3ged_A          227 GGMSKR  232 (247)
T ss_dssp             TTGGGC
T ss_pred             cCHHHh
Confidence            999875

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=100.00  E-value=5.2e-55  Score=369.15  Aligned_cols=243  Identities=24%  Similarity=0.318  Sum_probs=212.4

Q ss_pred             ccCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145            8 APFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus         8 ~~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      .++++|+||++|||||++|||++++++|+++|++|++++|+++..       ..+..++++|++++++++++++++.+++
T Consensus         4 ~dl~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~-------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   76 (261)
T 4h15_A            4 IEFLNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG-------LPEELFVEADLTTKEGCAIVAEATRQRL   76 (261)
T ss_dssp             CCCCCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT-------SCTTTEEECCTTSHHHHHHHHHHHHHHT
T ss_pred             hhccCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC-------CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            456789999999999999999999999999999999999976531       1234578999999999999999999999


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCC-CCchhhhh
Q 024145           88 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGL-GSPAYTIS  166 (272)
Q Consensus        88 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~-~~~~Y~~s  166 (272)
                      |++|+||||||+......++.+.+.++|++++++|+.+++.++|+++|+|+++++|+||++||..+..+.+ +...|++|
T Consensus        77 G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~~~~~~~Y~as  156 (261)
T 4h15_A           77 GGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPLPESTTAYAAA  156 (261)
T ss_dssp             SSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTTCHHHHHH
T ss_pred             CCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCCCCccHHHHHH
Confidence            99999999999876544678999999999999999999999999999999998999999999999998876 57889999


Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCC--------CCChhHHHHH---HhhcCCCCCCCCChHhHHHHH
Q 024145          167 KYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKG--------GVDPALIESS---MSQMGNLKGEFLKTDGIANAA  235 (272)
Q Consensus       167 K~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~--------~~~~~~~~~~---~~~~~~~~~~~~~~~dva~~~  235 (272)
                      |+|+.+|+|++|.|++++|||||+|+||+++||+....        ....+...+.   .....|+ +|+.+|||+|+++
T Consensus       157 Kaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl-gR~g~peevA~~v  235 (261)
T 4h15_A          157 KAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGIPL-GRPAKPEEVANLI  235 (261)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCTT-SSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCCCC-CCCcCHHHHHHHH
Confidence            99999999999999999999999999999999986421        1111211222   2233455 8999999999999


Q ss_pred             HHHhcCCCCCccccEEEecCcee
Q 024145          236 LYLASDESSYVSGQNLVVDGGFS  258 (272)
Q Consensus       236 ~~l~s~~~~~~~G~~i~~dgG~~  258 (272)
                      +||+|++++|+|||+|.||||..
T Consensus       236 ~fLaS~~a~~itG~~i~VDGG~v  258 (261)
T 4h15_A          236 AFLASDRAASITGAEYTIDGGTV  258 (261)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTCS
T ss_pred             HHHhCchhcCccCcEEEECCcCc
Confidence            99999999999999999999974

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=100.00  E-value=6.1e-52  Score=349.03  Aligned_cols=245  Identities=28%  Similarity=0.470  Sum_probs=223.3

Q ss_pred             cCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145            9 PFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      .+++++||++|||||++|||++++++|+++|++|++++|+++..++..++++.+..++++|++|+++++++++++.+++|
T Consensus         3 ~~~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   82 (248)
T 3op4_A            3 QFMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFG   82 (248)
T ss_dssp             CTTCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             cccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcC
Confidence            35778999999999999999999999999999999999999988888888877889999999999999999999999999


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHH
Q 024145           89 KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKY  168 (272)
Q Consensus        89 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~  168 (272)
                      ++|+||||||+...  .++.+.+.++|++.+++|+.+++.++++++|+|.+++.|+||++||..+..+.++...|++||+
T Consensus        83 ~iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~  160 (248)
T 3op4_A           83 GVDILVNNAGITRD--NLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKA  160 (248)
T ss_dssp             CCSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHH
T ss_pred             CCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHHHH
Confidence            99999999998765  6788999999999999999999999999999998888899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccc
Q 024145          169 GILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSG  248 (272)
Q Consensus       169 a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  248 (272)
                      |+++|+++++.|++++||+||+|+||+++|++.+.  ...+. ........+. +++.+|||+|++++||+++++.+++|
T Consensus       161 a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~--~~~~~-~~~~~~~~p~-~r~~~p~dva~~v~~L~s~~~~~itG  236 (248)
T 3op4_A          161 GVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKA--LNDEQ-RTATLAQVPA-GRLGDPREIASAVAFLASPEAAYITG  236 (248)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTT--SCHHH-HHHHHHTCTT-CSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhh--cCHHH-HHHHHhcCCC-CCCcCHHHHHHHHHHHcCCccCCccC
Confidence            99999999999999999999999999999999874  22222 2333333444 89999999999999999999999999


Q ss_pred             cEEEecCceee
Q 024145          249 QNLVVDGGFSV  259 (272)
Q Consensus       249 ~~i~~dgG~~~  259 (272)
                      ++|.+|||..+
T Consensus       237 ~~i~vdgG~~~  247 (248)
T 3op4_A          237 ETLHVNGGMYM  247 (248)
T ss_dssp             CEEEESTTSSC
T ss_pred             cEEEECCCeec
Confidence            99999999864

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=100.00  E-value=2e-51  Score=349.35  Aligned_cols=246  Identities=28%  Similarity=0.459  Sum_probs=213.8

Q ss_pred             ccCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145            8 APFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus         8 ~~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      ..|.+++||++|||||++|||++++++|+++|++|++++|+.+..+++.++++.++.++.+|++|+++++++++++.+++
T Consensus        20 ~~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   99 (266)
T 3grp_A           20 GSMFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREM   99 (266)
T ss_dssp             -CTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cchhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHc
Confidence            45788999999999999999999999999999999999999998888888888899999999999999999999999999


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhH
Q 024145           88 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISK  167 (272)
Q Consensus        88 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK  167 (272)
                      +++|+||||||+...  .++.+.+.++|++++++|+.+++.++++++|+|.+++.|+||++||..+..+.++...|++||
T Consensus       100 g~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asK  177 (266)
T 3grp_A          100 EGIDILVNNAGITRD--GLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNPGQTNYCAAK  177 (266)
T ss_dssp             TSCCEEEECCCCC-------CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-------CHHHHHHHH
T ss_pred             CCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCCCCchhHHHHH
Confidence            999999999998765  678889999999999999999999999999999888889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCcc
Q 024145          168 YGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVS  247 (272)
Q Consensus       168 ~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  247 (272)
                      +|+++|+++++.|++++||+||+|+||+++|++...   ..+...+......++ +++.+|||+|++++||+++++++++
T Consensus       178 aa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~---~~~~~~~~~~~~~p~-~r~~~~edvA~~v~~L~s~~~~~it  253 (266)
T 3grp_A          178 AGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDK---LNEKQKEAIMAMIPM-KRMGIGEEIAFATVYLASDEAAYLT  253 (266)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHT---CCHHHHHHHHTTCTT-CSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhc---cCHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCccccCcc
Confidence            999999999999999999999999999999999874   223333334444455 8999999999999999999999999


Q ss_pred             ccEEEecCceee
Q 024145          248 GQNLVVDGGFSV  259 (272)
Q Consensus       248 G~~i~~dgG~~~  259 (272)
                      |++|.+|||+.+
T Consensus       254 G~~i~vdGG~~~  265 (266)
T 3grp_A          254 GQTLHINGGMAM  265 (266)
T ss_dssp             SCEEEESTTC--
T ss_pred             CCEEEECCCeee
Confidence            999999999864

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=4.3e-51  Score=346.54  Aligned_cols=247  Identities=26%  Similarity=0.407  Sum_probs=222.8

Q ss_pred             ccCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---C-CceEEEEecCCCHHHHHHHHHHH
Q 024145            8 APFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---G-QDVCYIHCDISNEDEVINLVDTA   83 (272)
Q Consensus         8 ~~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~D~~~~~~~~~~~~~~   83 (272)
                      .+|++++||++|||||++|||++++++|+++|++|++++|+.+..++..+++   + .++.++++|++|+++++++++++
T Consensus         3 ~~m~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   82 (262)
T 3pk0_A            3 GSMFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRA   82 (262)
T ss_dssp             CCTTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHH
Confidence            3578899999999999999999999999999999999999988877776655   2 57999999999999999999999


Q ss_pred             HHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccccc-ccCCCCch
Q 024145           84 VSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTE-IAGLGSPA  162 (272)
Q Consensus        84 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~-~~~~~~~~  162 (272)
                      .++++++|+||||||+...  .++.+.+.++|++++++|+.+++.++++++|+|.+++.|+||++||..+. .+.++...
T Consensus        83 ~~~~g~id~lvnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~  160 (262)
T 3pk0_A           83 VEEFGGIDVVCANAGVFPD--APLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGYPGWSH  160 (262)
T ss_dssp             HHHHSCCSEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBCCTTCHH
T ss_pred             HHHhCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCCChh
Confidence            9999999999999998765  77899999999999999999999999999999988888999999999886 78889999


Q ss_pred             hhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCC
Q 024145          163 YTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDE  242 (272)
Q Consensus       163 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  242 (272)
                      |++||+|+++|+++++.|++++||+||+|+||+++|++...   ..+...+.+....++ +++.+|||+|++++||++++
T Consensus       161 Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~---~~~~~~~~~~~~~p~-~r~~~p~dva~~v~~L~s~~  236 (262)
T 3pk0_A          161 YGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLE---NGEEYIASMARSIPA-GALGTPEDIGHLAAFLATKE  236 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHT---TCHHHHHHHHTTSTT-SSCBCHHHHHHHHHHHHSGG
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccc---cCHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCcc
Confidence            99999999999999999999999999999999999998763   223333334444455 89999999999999999999


Q ss_pred             CCCccccEEEecCceeec
Q 024145          243 SSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       243 ~~~~~G~~i~~dgG~~~~  260 (272)
                      +++++|++|.+|||..+.
T Consensus       237 ~~~itG~~i~vdGG~~~~  254 (262)
T 3pk0_A          237 AGYITGQAIAVDGGQVLP  254 (262)
T ss_dssp             GTTCCSCEEEESTTTTCC
T ss_pred             ccCCcCCEEEECCCeecC
Confidence            999999999999998874

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=100.00  E-value=3e-51  Score=348.02  Aligned_cols=247  Identities=24%  Similarity=0.272  Sum_probs=219.1

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh----CC-ceEEEEecCCCHHHHHHHHHHHHH
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL----GQ-DVCYIHCDISNEDEVINLVDTAVS   85 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----~~-~~~~~~~D~~~~~~~~~~~~~~~~   85 (272)
                      ++++||++|||||++|||++++++|+++|++|++++|+.+..++..+++    +. ++.++.+|++|.++++++++++.+
T Consensus         4 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   83 (265)
T 3lf2_A            4 YDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACER   83 (265)
T ss_dssp             CCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence            5689999999999999999999999999999999999988777666554    22 599999999999999999999999


Q ss_pred             HhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhh
Q 024145           86 KFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTI  165 (272)
Q Consensus        86 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~  165 (272)
                      ++|++|+||||||+...  .++.+.+.++|++.+++|+.+++.++++++|+|.+++.|+||++||..+..+.++...|++
T Consensus        84 ~~g~id~lvnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  161 (265)
T 3lf2_A           84 TLGCASILVNNAGQGRV--STFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATSA  161 (265)
T ss_dssp             HHCSCSEEEECCCCCCC--BCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCCTTBHHHHH
T ss_pred             HcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCCCCchhhHH
Confidence            99999999999998765  6788999999999999999999999999999999888999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCC-------ChhHHHHHHhhc--CCCCCCCCChHhHHHHHH
Q 024145          166 SKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGV-------DPALIESSMSQM--GNLKGEFLKTDGIANAAL  236 (272)
Q Consensus       166 sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~-------~~~~~~~~~~~~--~~~~~~~~~~~dva~~~~  236 (272)
                      ||+|+++|+++++.|++++||+||+|+||+++||+......       ..+...+.....  .|+ +++.+|||+|++++
T Consensus       162 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~pedvA~~v~  240 (265)
T 3lf2_A          162 ARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPL-GRLGKPIEAARAIL  240 (265)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCTT-CSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCCc-CCCcCHHHHHHHHH
Confidence            99999999999999999999999999999999998653211       112222222221  444 89999999999999


Q ss_pred             HHhcCCCCCccccEEEecCceeec
Q 024145          237 YLASDESSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       237 ~l~s~~~~~~~G~~i~~dgG~~~~  260 (272)
                      ||+++.+++++|++|.+|||++.+
T Consensus       241 fL~s~~~~~itG~~i~vdGG~~~~  264 (265)
T 3lf2_A          241 FLASPLSAYTTGSHIDVSGGLSRH  264 (265)
T ss_dssp             HHHSGGGTTCCSEEEEESSSCCCC
T ss_pred             HHhCchhcCcCCCEEEECCCCcCC
Confidence            999999999999999999998765

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=100.00  E-value=2.9e-51  Score=344.74  Aligned_cols=244  Identities=27%  Similarity=0.396  Sum_probs=221.1

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      .+++||++|||||++|||++++++|+++|++|++++|+.+..++..++++.++.++++|++|+++++++++++.+++|++
T Consensus         2 ~~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   81 (247)
T 3rwb_A            2 ERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGI   81 (247)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCC
Confidence            46899999999999999999999999999999999999998888888888899999999999999999999999999999


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCC-CceEEEEecccccccCCCCchhhhhHHH
Q 024145           91 DIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ-KGCILFTASACTEIAGLGSPAYTISKYG  169 (272)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~Y~~sK~a  169 (272)
                      |+||||||+...  .++.+.+.++|++++++|+.+++.++++++|+|.+++ .|+||++||..+..+.+++..|++||+|
T Consensus        82 d~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa  159 (247)
T 3rwb_A           82 DILVNNASIVPF--VAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGG  159 (247)
T ss_dssp             SEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCTTCHHHHHHHHH
T ss_pred             CEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCCCchhhHHHHHH
Confidence            999999998765  6788999999999999999999999999999998765 7999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCcccc
Q 024145          170 ILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQ  249 (272)
Q Consensus       170 ~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  249 (272)
                      +++|+++++.|++++||+||+|+||+++|++....  .............++ +++.+|||+|++++||+++++.+++|+
T Consensus       160 ~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~--~~~~~~~~~~~~~~~-~r~~~pedva~~v~~L~s~~~~~itG~  236 (247)
T 3rwb_A          160 VIGFTRALATELGKYNITANAVTPGLIESDGVKAS--PHNEAFGFVEMLQAM-KGKGQPEHIADVVSFLASDDARWITGQ  236 (247)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS--GGGGGHHHHHHHSSS-CSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEeeCcCcCcccccc--ChhHHHHHHhccccc-CCCcCHHHHHHHHHHHhCccccCCCCC
Confidence            99999999999999999999999999999987642  122222223332444 788999999999999999999999999


Q ss_pred             EEEecCceee
Q 024145          250 NLVVDGGFSV  259 (272)
Q Consensus       250 ~i~~dgG~~~  259 (272)
                      +|.+|||+..
T Consensus       237 ~i~vdGG~~~  246 (247)
T 3rwb_A          237 TLNVDAGMVR  246 (247)
T ss_dssp             EEEESTTSSC
T ss_pred             EEEECCCccC
Confidence            9999999864

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=100.00  E-value=1.1e-50  Score=342.81  Aligned_cols=245  Identities=31%  Similarity=0.435  Sum_probs=220.3

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (272)
                      ..+++||++|||||++|||++++++|+++|++|++++|+.+..++..+++   +.++.++.+|++|+++++++++++.++
T Consensus         7 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   86 (256)
T 3gaf_A            7 PFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQ   86 (256)
T ss_dssp             TTCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999988777666554   668999999999999999999999999


Q ss_pred             hCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhh
Q 024145           87 FGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTIS  166 (272)
Q Consensus        87 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~s  166 (272)
                      ++++|+||||||....  .++ +.+.++|++++++|+.+++.++++++|+|.+++.|+||++||..+..+.++...|++|
T Consensus        87 ~g~id~lv~nAg~~~~--~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  163 (256)
T 3gaf_A           87 FGKITVLVNNAGGGGP--KPF-DMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGSS  163 (256)
T ss_dssp             HSCCCEEEECCCCCCC--CCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCCTTCHHHHHH
T ss_pred             cCCCCEEEECCCCCCC--CCC-CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCCCCchHHHHH
Confidence            9999999999998765  556 8899999999999999999999999999998888999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCc
Q 024145          167 KYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYV  246 (272)
Q Consensus       167 K~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  246 (272)
                      |+|+++|+++++.|++++||+||+|+||+++|++.....  .++..+.+....++ +++.+|+|+|++++||+++++.++
T Consensus       164 Kaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~p~-~r~~~~~dva~~~~~L~s~~~~~i  240 (256)
T 3gaf_A          164 KAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVL--TPEIERAMLKHTPL-GRLGEAQDIANAALFLCSPAAAWI  240 (256)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHC--CHHHHHHHHTTCTT-SSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhcc--CHHHHHHHHhcCCC-CCCCCHHHHHHHHHHHcCCcccCc
Confidence            999999999999999999999999999999999875321  22333334444455 899999999999999999999999


Q ss_pred             cccEEEecCceeec
Q 024145          247 SGQNLVVDGGFSVV  260 (272)
Q Consensus       247 ~G~~i~~dgG~~~~  260 (272)
                      +|++|.+|||....
T Consensus       241 tG~~i~vdgG~~~~  254 (256)
T 3gaf_A          241 SGQVLTVSGGGVQE  254 (256)
T ss_dssp             CSCEEEESTTSCCC
T ss_pred             cCCEEEECCCcccc
Confidence            99999999998754

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=100.00  E-value=2.4e-50  Score=343.63  Aligned_cols=251  Identities=29%  Similarity=0.374  Sum_probs=225.0

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      .+++||++|||||++|||++++++|+++|++|++++|+.+..++..++++.++.++.+|++|+++++++++++.+++|++
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   86 (271)
T 3tzq_B            7 AELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRL   86 (271)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            46899999999999999999999999999999999999999888888888889999999999999999999999999999


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHH
Q 024145           91 DIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGI  170 (272)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~  170 (272)
                      |+||||||........+.+.+.++|++.+++|+.+++.++++++|+|.+++.|+||++||..+..+.++...|++||+|+
T Consensus        87 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~  166 (271)
T 3tzq_B           87 DIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYACTKAAI  166 (271)
T ss_dssp             CEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBCSSCHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCCCCChHHHHHHHHH
Confidence            99999999874433667889999999999999999999999999999988899999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccccE
Q 024145          171 LGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQN  250 (272)
Q Consensus       171 ~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~  250 (272)
                      ++|+++++.|++++||+||+|+||+++|++.....  .+...+.+....+. +++.+|+|+|++++||+++++.+++|++
T Consensus       167 ~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~--~~~~~~~~~~~~~~-~r~~~p~dvA~~v~~L~s~~~~~itG~~  243 (271)
T 3tzq_B          167 ETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGL--PQPIVDIFATHHLA-GRIGEPHEIAELVCFLASDRAAFITGQV  243 (271)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC-----CHHHHHHHHTTSTT-SSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccC--CHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCcccCCcCCCE
Confidence            99999999999999999999999999999876321  23333334444444 8999999999999999999999999999


Q ss_pred             EEecCceeeccCcc
Q 024145          251 LVVDGGFSVVNPTV  264 (272)
Q Consensus       251 i~~dgG~~~~~~~~  264 (272)
                      |.+|||.....|.+
T Consensus       244 i~vdGG~~~~~~~~  257 (271)
T 3tzq_B          244 IAADSGLLAHLPGL  257 (271)
T ss_dssp             EEESTTTTTBCTTH
T ss_pred             EEECCCccccCCCc
Confidence            99999955455554

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=100.00  E-value=1.2e-50  Score=346.48  Aligned_cols=250  Identities=34%  Similarity=0.511  Sum_probs=223.6

Q ss_pred             cCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145            9 PFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      +.+++++|++|||||++|||++++++|+++|++|++++|+++..++..++++.++.++.+|++|+++++++++++.+++|
T Consensus        21 ~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  100 (277)
T 4dqx_A           21 QSMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWG  100 (277)
T ss_dssp             -CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             ccCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            45678999999999999999999999999999999999999888888888888999999999999999999999999999


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHH
Q 024145           89 KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKY  168 (272)
Q Consensus        89 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~  168 (272)
                      ++|+||||||+...  .++.+.+.++|++++++|+.+++.++++++|+|.+++.|+||++||..+..+.++...|++||+
T Consensus       101 ~iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa  178 (277)
T 4dqx_A          101 RVDVLVNNAGFGTT--GNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIADRTAYVASKG  178 (277)
T ss_dssp             CCCEEEECCCCCCC--BCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred             CCCEEEECCCcCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCCCCChhHHHHHH
Confidence            99999999998765  6788999999999999999999999999999999888899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCC---CCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCC
Q 024145          169 GILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKG---GVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSY  245 (272)
Q Consensus       169 a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  245 (272)
                      |+++|+++++.|++++||+||+|+||+++|++....   ...............+. +++.+|||+|++++||+++.+.+
T Consensus       179 a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~-~r~~~pedvA~~v~~L~s~~~~~  257 (277)
T 4dqx_A          179 AISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVM-DRMGTAEEIAEAMLFLASDRSRF  257 (277)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTTSTT-CSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhcCcc-cCCcCHHHHHHHHHHHhCCccCC
Confidence            999999999999999999999999999999984321   01112222223333444 88999999999999999999999


Q ss_pred             ccccEEEecCceeecc
Q 024145          246 VSGQNLVVDGGFSVVN  261 (272)
Q Consensus       246 ~~G~~i~~dgG~~~~~  261 (272)
                      ++|++|.+|||..+..
T Consensus       258 itG~~i~vdGG~~~~~  273 (277)
T 4dqx_A          258 ATGSILTVDGGSSIGN  273 (277)
T ss_dssp             CCSCEEEESSSSSSCC
T ss_pred             CcCCEEEECCchhhhh
Confidence            9999999999998764

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=100.00  E-value=2.2e-50  Score=347.35  Aligned_cols=248  Identities=26%  Similarity=0.392  Sum_probs=223.3

Q ss_pred             CccCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhC----CceEEEEecCCCHHHHHHHHHH
Q 024145            7 AAPFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLG----QDVCYIHCDISNEDEVINLVDT   82 (272)
Q Consensus         7 ~~~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~   82 (272)
                      +..+++++||++|||||++|||++++++|+++|++|++++|+.+..++..+++.    .++.++.+|++|++++++++++
T Consensus        33 ~~~m~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~  112 (293)
T 3rih_A           33 RKVMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAART  112 (293)
T ss_dssp             -CCTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHH
T ss_pred             cccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHH
Confidence            345788999999999999999999999999999999999999988888777763    4789999999999999999999


Q ss_pred             HHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccccc-ccCCCCc
Q 024145           83 AVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTE-IAGLGSP  161 (272)
Q Consensus        83 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~-~~~~~~~  161 (272)
                      +.++++++|+||||||+...  .++.+.+.++|++.+++|+.+++.++++++|+|.+++.|+||++||..+. .+.++..
T Consensus       113 ~~~~~g~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~~~~~~  190 (293)
T 3rih_A          113 VVDAFGALDVVCANAGIFPE--ARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGWS  190 (293)
T ss_dssp             HHHHHSCCCEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTBBCTTCH
T ss_pred             HHHHcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccCCCCCCH
Confidence            99999999999999998765  77889999999999999999999999999999988888999999999986 7889999


Q ss_pred             hhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcC
Q 024145          162 AYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASD  241 (272)
Q Consensus       162 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  241 (272)
                      .|++||+|+++|+++++.|++++||+||+|+||+++|++....  . +...+......++ +++.+|+|+|++++||+++
T Consensus       191 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~--~-~~~~~~~~~~~p~-~r~~~p~dvA~~v~fL~s~  266 (293)
T 3rih_A          191 HYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDM--G-EEYISGMARSIPM-GMLGSPVDIGHLAAFLATD  266 (293)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHT--C-HHHHHHHHTTSTT-SSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhc--c-HHHHHHHHhcCCC-CCCCCHHHHHHHHHHHhCc
Confidence            9999999999999999999999999999999999999987632  2 2223333344455 8999999999999999999


Q ss_pred             CCCCccccEEEecCceeec
Q 024145          242 ESSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       242 ~~~~~~G~~i~~dgG~~~~  260 (272)
                      ++.+++|++|.+|||..+.
T Consensus       267 ~a~~itG~~i~vdGG~~~~  285 (293)
T 3rih_A          267 EAGYITGQAIVVDGGQVLP  285 (293)
T ss_dssp             GGTTCCSCEEEESTTTTCB
T ss_pred             cccCCCCCEEEECCCccCC
Confidence            9999999999999999874

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.9e-50  Score=344.51  Aligned_cols=250  Identities=36%  Similarity=0.535  Sum_probs=222.5

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (272)
                      |.+++||++|||||++|||++++++|+++|++|++++|+.+..+++.+++   +.++.++.+|++|+++++++++++.++
T Consensus         3 m~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (280)
T 3tox_A            3 MSRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRR   82 (280)
T ss_dssp             -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            55789999999999999999999999999999999999998888877766   457999999999999999999999999


Q ss_pred             hCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccccc-ccCCCCchhhh
Q 024145           87 FGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTE-IAGLGSPAYTI  165 (272)
Q Consensus        87 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~-~~~~~~~~Y~~  165 (272)
                      +|++|+||||||+... ..++.+.+.++|++++++|+.+++.++++++|+|.+++.|+||++||..+. .+.++...|++
T Consensus        83 ~g~iD~lvnnAg~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~a  161 (280)
T 3tox_A           83 FGGLDTAFNNAGALGA-MGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAA  161 (280)
T ss_dssp             HSCCCEEEECCCCCCS-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBCCTTCHHHHH
T ss_pred             cCCCCEEEECCCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCCCCCchhHHH
Confidence            9999999999997643 267889999999999999999999999999999998889999999999987 67888999999


Q ss_pred             hHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCC-CChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCC
Q 024145          166 SKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGG-VDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESS  244 (272)
Q Consensus       166 sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  244 (272)
                      ||+|+++|+++++.|++++||+||+|+||+++|++..... ...+..........++ +++.+|||+|++++||+++.++
T Consensus       162 sKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~pedvA~~v~~L~s~~a~  240 (280)
T 3tox_A          162 SKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHAL-KRIARPEEIAEAALYLASDGAS  240 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTSTT-SSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccCcc-CCCcCHHHHHHHHHHHhCcccc
Confidence            9999999999999999999999999999999999876411 1223333444444455 8899999999999999999999


Q ss_pred             CccccEEEecCceeecc
Q 024145          245 YVSGQNLVVDGGFSVVN  261 (272)
Q Consensus       245 ~~~G~~i~~dgG~~~~~  261 (272)
                      +++|++|.+|||..+..
T Consensus       241 ~itG~~i~vdGG~~~~~  257 (280)
T 3tox_A          241 FVTGAALLADGGASVTK  257 (280)
T ss_dssp             TCCSCEEEESTTGGGCC
T ss_pred             CCcCcEEEECCCccccc
Confidence            99999999999998863

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=100.00  E-value=2.6e-50  Score=340.41  Aligned_cols=248  Identities=28%  Similarity=0.420  Sum_probs=221.6

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGK   89 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (272)
                      |.+++||++|||||++|||++++++|+++|++|++++|+++..+++.++++.++.++.+|++|+++++++++++.+++++
T Consensus         3 m~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (255)
T 4eso_A            3 MGNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGA   82 (255)
T ss_dssp             -CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            45789999999999999999999999999999999999999888888888888999999999999999999999999999


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHH
Q 024145           90 LDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYG  169 (272)
Q Consensus        90 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a  169 (272)
                      +|+||||||....  .++.+.+.++|++.+++|+.+++.++++++|+|.+  .|+||++||..+..+.++...|++||+|
T Consensus        83 id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asKaa  158 (255)
T 4eso_A           83 IDLLHINAGVSEL--EPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIRE--GGSIVFTSSVADEGGHPGMSVYSASKAA  158 (255)
T ss_dssp             EEEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCGGGSSBCTTBHHHHHHHHH
T ss_pred             CCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhc--CCEEEEECChhhcCCCCCchHHHHHHHH
Confidence            9999999998765  67889999999999999999999999999999965  5899999999999999999999999999


Q ss_pred             HHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHH---HHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCc
Q 024145          170 ILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALI---ESSMSQMGNLKGEFLKTDGIANAALYLASDESSYV  246 (272)
Q Consensus       170 ~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  246 (272)
                      +++|+++++.|++++||+||+|+||+++||+...........   ........++ +++.+|||+|++++||+++ ++++
T Consensus       159 ~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~pedvA~~v~~L~s~-~~~i  236 (255)
T 4eso_A          159 LVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPM-KRNGTADEVARAVLFLAFE-ATFT  236 (255)
T ss_dssp             HHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHSTT-SSCBCHHHHHHHHHHHHHT-CTTC
T ss_pred             HHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccCCC-CCCcCHHHHHHHHHHHcCc-CcCc
Confidence            999999999999999999999999999999876432222222   2222333455 8999999999999999998 8999


Q ss_pred             cccEEEecCceeeccCc
Q 024145          247 SGQNLVVDGGFSVVNPT  263 (272)
Q Consensus       247 ~G~~i~~dgG~~~~~~~  263 (272)
                      +|++|.+|||.......
T Consensus       237 tG~~i~vdGG~~~~l~~  253 (255)
T 4eso_A          237 TGAKLAVDGGLGQKLST  253 (255)
T ss_dssp             CSCEEEESTTTTTTBCC
T ss_pred             cCCEEEECCCccccCcC
Confidence            99999999999876443

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=100.00  E-value=7.7e-50  Score=338.10  Aligned_cols=246  Identities=23%  Similarity=0.309  Sum_probs=219.7

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEe-ecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIA-DVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKFGK   89 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~-~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (272)
                      +||++|||||++|||++++++|+++|++|+++ +|+.+..++..+++   +.++.++.+|++|+++++++++++.+++++
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGR   82 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            68999999999999999999999999999887 78877777666554   568999999999999999999999999999


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHH
Q 024145           90 LDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYG  169 (272)
Q Consensus        90 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a  169 (272)
                      +|+||||||....  .++.+.+.++|++++++|+.+++.++++++|+|.+++.|+||++||..+..+.++...|++||+|
T Consensus        83 id~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa  160 (258)
T 3oid_A           83 LDVFVNNAASGVL--RPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAA  160 (258)
T ss_dssp             CCEEEECCCCCCC--SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBCTTCHHHHHHHHH
T ss_pred             CCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCCCCcHHHHHHHHH
Confidence            9999999998655  67889999999999999999999999999999998889999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCcccc
Q 024145          170 ILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQ  249 (272)
Q Consensus       170 ~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  249 (272)
                      +++|+++++.|++++||+||+|+||+++|++...... .+...+......++ +++.+|+|+|++++||+++++++++|+
T Consensus       161 ~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~p~-~r~~~~~dva~~v~~L~s~~~~~itG~  238 (258)
T 3oid_A          161 LEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPN-REDLLEDARQNTPA-GRMVEIKDMVDTVEFLVSSKADMIRGQ  238 (258)
T ss_dssp             HHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTT-HHHHHHHHHHHCTT-SSCBCHHHHHHHHHHHTSSTTTTCCSC
T ss_pred             HHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhccc-CHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCcccCCccCC
Confidence            9999999999999999999999999999999874322 22223333344455 899999999999999999999999999


Q ss_pred             EEEecCceeeccCc
Q 024145          250 NLVVDGGFSVVNPT  263 (272)
Q Consensus       250 ~i~~dgG~~~~~~~  263 (272)
                      +|.+|||.....+.
T Consensus       239 ~i~vdGG~~~~~~~  252 (258)
T 3oid_A          239 TIIVDGGRSLLVLE  252 (258)
T ss_dssp             EEEESTTGGGBCC-
T ss_pred             EEEECCCccCCCCC
Confidence            99999999886554

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=100.00  E-value=1.2e-50  Score=344.54  Aligned_cols=248  Identities=34%  Similarity=0.440  Sum_probs=221.3

Q ss_pred             ccCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh----CCceEEEEecCCCHHHHHHHHHHH
Q 024145            8 APFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL----GQDVCYIHCDISNEDEVINLVDTA   83 (272)
Q Consensus         8 ~~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~   83 (272)
                      ..+++++||++|||||++|||++++++|+++|++|++++|+.+..++..+++    +.++.++++|++|+++++++++++
T Consensus        13 ~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   92 (266)
T 4egf_A           13 AGVLRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRA   92 (266)
T ss_dssp             CGGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHH
T ss_pred             ccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHH
Confidence            4577899999999999999999999999999999999999988777665543    678999999999999999999999


Q ss_pred             HHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCC-CceEEEEecccccccCCCCch
Q 024145           84 VSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ-KGCILFTASACTEIAGLGSPA  162 (272)
Q Consensus        84 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~  162 (272)
                      .++++++|+||||||+...  .++.+.+.++|++.+++|+.+++.++++++|+|.+++ .|+||++||..+..+.++...
T Consensus        93 ~~~~g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  170 (266)
T 4egf_A           93 AEAFGGLDVLVNNAGISHP--QPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYA  170 (266)
T ss_dssp             HHHHTSCSEEEEECCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHH
T ss_pred             HHHcCCCCEEEECCCcCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCCCChH
Confidence            9999999999999998765  6788999999999999999999999999999998765 789999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCC
Q 024145          163 YTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDE  242 (272)
Q Consensus       163 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  242 (272)
                      |++||+|+++|+++++.|++++||+||+|+||+++|++........... .......++ +++.+|||+|++++||++++
T Consensus       171 Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~-~~~~~~~p~-~r~~~p~dva~~v~~L~s~~  248 (266)
T 4egf_A          171 YCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEAKS-APMIARIPL-GRFAVPHEVSDAVVWLASDA  248 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCSHHHH-HHHHTTCTT-SSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccChHHH-HHHHhcCCC-CCCcCHHHHHHHHHHHhCch
Confidence            9999999999999999999999999999999999999876422222222 223333444 89999999999999999999


Q ss_pred             CCCccccEEEecCceee
Q 024145          243 SSYVSGQNLVVDGGFSV  259 (272)
Q Consensus       243 ~~~~~G~~i~~dgG~~~  259 (272)
                      +.+++|++|.+|||+.+
T Consensus       249 ~~~itG~~i~vdGG~~~  265 (266)
T 4egf_A          249 ASMINGVDIPVDGGYTM  265 (266)
T ss_dssp             GTTCCSCEEEESTTGGG
T ss_pred             hcCccCcEEEECCCccC
Confidence            99999999999999864

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=100.00  E-value=2e-50  Score=341.85  Aligned_cols=247  Identities=28%  Similarity=0.400  Sum_probs=220.8

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGK   89 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (272)
                      |.+++||++|||||++|||++++++|+++|++|++++|+.+..++..++++.++.++++|++|+++++++++++.+++|+
T Consensus         3 m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   82 (259)
T 4e6p_A            3 MKRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGG   82 (259)
T ss_dssp             -CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSS
T ss_pred             cccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence            45689999999999999999999999999999999999999888888888888999999999999999999999999999


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCC-CceEEEEecccccccCCCCchhhhhHH
Q 024145           90 LDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ-KGCILFTASACTEIAGLGSPAYTISKY  168 (272)
Q Consensus        90 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~Y~~sK~  168 (272)
                      +|+||||||+...  .++.+.+.++|++.+++|+.+++.++++++|+|.+++ .|+||++||..+..+.+....|++||+
T Consensus        83 id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~  160 (259)
T 4e6p_A           83 LDILVNNAALFDL--APIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEALVAIYCATKA  160 (259)
T ss_dssp             CCEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred             CCEEEECCCcCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCCCChHHHHHHH
Confidence            9999999998765  6788999999999999999999999999999997755 799999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCC--------CChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhc
Q 024145          169 GILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGG--------VDPALIESSMSQMGNLKGEFLKTDGIANAALYLAS  240 (272)
Q Consensus       169 a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  240 (272)
                      |+++|+++++.|++++||+||+|+||+++||+.....        ....+.........++ +++.+|||+|++++||++
T Consensus       161 a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~~~dva~~v~~L~s  239 (259)
T 4e6p_A          161 AVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPF-GRMGTAEDLTGMAIFLAS  239 (259)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTT-SSCBCTHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhhhhhhhhhccCChHHHHHHHhccCCC-CCCcCHHHHHHHHHHHhC
Confidence            9999999999999999999999999999999865210        0111222223333444 899999999999999999


Q ss_pred             CCCCCccccEEEecCceee
Q 024145          241 DESSYVSGQNLVVDGGFSV  259 (272)
Q Consensus       241 ~~~~~~~G~~i~~dgG~~~  259 (272)
                      +++.+++|++|.+|||..+
T Consensus       240 ~~~~~itG~~i~vdgG~~~  258 (259)
T 4e6p_A          240 AESDYIVSQTYNVDGGNWM  258 (259)
T ss_dssp             GGGTTCCSCEEEESTTSSC
T ss_pred             CccCCCCCCEEEECcChhc
Confidence            9999999999999999865

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=100.00  E-value=1.7e-50  Score=345.53  Aligned_cols=250  Identities=27%  Similarity=0.315  Sum_probs=220.7

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh----CCceEEEEecCCCHHHHHHHHHHHHH
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL----GQDVCYIHCDISNEDEVINLVDTAVS   85 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (272)
                      +.+++||++|||||++|||++++++|+++|++|++++|+.+..++..+++    +.++.++.+|++|+++++++++++.+
T Consensus        22 ~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  101 (277)
T 4fc7_A           22 PDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALK  101 (277)
T ss_dssp             TTTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            45589999999999999999999999999999999999988766665544    67899999999999999999999999


Q ss_pred             HhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhh
Q 024145           86 KFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTI  165 (272)
Q Consensus        86 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~  165 (272)
                      ++|++|+||||||....  .++.+.+.++|++++++|+.+++.++++++|+|.+++.|+||++||..+..+.++...|++
T Consensus       102 ~~g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  179 (277)
T 4fc7_A          102 EFGRIDILINCAAGNFL--CPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGS  179 (277)
T ss_dssp             HHSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTCTTCHHHHH
T ss_pred             HcCCCCEEEECCcCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCcHHHHH
Confidence            99999999999997665  6788999999999999999999999999999998877899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCC
Q 024145          166 SKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSY  245 (272)
Q Consensus       166 sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  245 (272)
                      ||+|+++|+++++.|++++||+||+|+||+++|++...................++ +++.+|||+|++++||+++++++
T Consensus       180 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~-~r~~~p~dvA~~v~fL~s~~~~~  258 (277)
T 4fc7_A          180 AKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPL-QRLGNKTEIAHSVLYLASPLASY  258 (277)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTSTT-SSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHHhccCCC-CCCcCHHHHHHHHHHHcCCccCC
Confidence            99999999999999999999999999999999986432111122222333344455 89999999999999999999999


Q ss_pred             ccccEEEecCceeeccC
Q 024145          246 VSGQNLVVDGGFSVVNP  262 (272)
Q Consensus       246 ~~G~~i~~dgG~~~~~~  262 (272)
                      ++|++|.+|||..+..|
T Consensus       259 itG~~i~vdGG~~~~~~  275 (277)
T 4fc7_A          259 VTGAVLVADGGAWLTFP  275 (277)
T ss_dssp             CCSCEEEESTTHHHHCC
T ss_pred             cCCCEEEECCCcccCCC
Confidence            99999999999987644

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=100.00  E-value=9e-50  Score=341.66  Aligned_cols=251  Identities=28%  Similarity=0.426  Sum_probs=215.3

Q ss_pred             ccCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCc------------chHHHHHH---HhCCceEEEEecCCC
Q 024145            8 APFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQD------------KLGEDLAD---KLGQDVCYIHCDISN   72 (272)
Q Consensus         8 ~~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~------------~~~~~~~~---~~~~~~~~~~~D~~~   72 (272)
                      .+|.+++||++|||||++|||++++++|+++|++|++++|++            +..++..+   ..+.++.++.+|++|
T Consensus         3 ~~m~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~   82 (281)
T 3s55_A            3 GSMADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKD   82 (281)
T ss_dssp             ---CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTC
T ss_pred             CcccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCC
Confidence            457789999999999999999999999999999999999972            33333333   336789999999999


Q ss_pred             HHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccc
Q 024145           73 EDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASAC  152 (272)
Q Consensus        73 ~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~  152 (272)
                      +++++++++++.+++|++|+||||||+...  .++.+.+.++|++++++|+.+++.++++++|+|.+++.|+||++||..
T Consensus        83 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~  160 (281)
T 3s55_A           83 RAALESFVAEAEDTLGGIDIAITNAGISTI--ALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSML  160 (281)
T ss_dssp             HHHHHHHHHHHHHHHTCCCEEEECCCCCCC--CCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGG
T ss_pred             HHHHHHHHHHHHHhcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChh
Confidence            999999999999999999999999998765  678899999999999999999999999999999888889999999999


Q ss_pred             ccccCCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCC-----------CChhHHHHHHhhcCCC
Q 024145          153 TEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGG-----------VDPALIESSMSQMGNL  221 (272)
Q Consensus       153 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~-----------~~~~~~~~~~~~~~~~  221 (272)
                      +..+.++...|++||+|+++|+++++.|++++||+||+|+||+++||+.....           ................
T Consensus       161 ~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (281)
T 3s55_A          161 GHSANFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQ  240 (281)
T ss_dssp             GGSCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHHHHHHHHCSS
T ss_pred             hcCCCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchhHHHHHHHhhhcc
Confidence            99999999999999999999999999999999999999999999999875310           0111111211222222


Q ss_pred             CCCCCChHhHHHHHHHHhcCCCCCccccEEEecCceeec
Q 024145          222 KGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       222 ~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~  260 (272)
                      .+++.+|||+|++++||+++.+.+++|++|.+|||..+.
T Consensus       241 ~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~~  279 (281)
T 3s55_A          241 YAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGATAR  279 (281)
T ss_dssp             SCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred             CcCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCcccC
Confidence            378999999999999999999999999999999998764

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=100.00  E-value=2e-50  Score=343.92  Aligned_cols=243  Identities=28%  Similarity=0.437  Sum_probs=219.5

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+..+++.+++   +.++.++.+|++|.++++++++++.+++
T Consensus        24 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  103 (270)
T 3ftp_A           24 KTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEF  103 (270)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence            4589999999999999999999999999999999999988777666544   5678999999999999999999999999


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhH
Q 024145           88 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISK  167 (272)
Q Consensus        88 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK  167 (272)
                      |++|+||||||+...  .++.+.+.++|++++++|+.+++.++++++|+|.+++.|+||++||..+..+.++...|++||
T Consensus       104 g~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  181 (270)
T 3ftp_A          104 GALNVLVNNAGITQD--QLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAAAK  181 (270)
T ss_dssp             SCCCEEEECCCCCCC--BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHHHH
T ss_pred             CCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCchhHHHHH
Confidence            999999999998765  678899999999999999999999999999999888889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCcc
Q 024145          168 YGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVS  247 (272)
Q Consensus       168 ~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  247 (272)
                      +|+++|+++++.|++++||+||+|+||+++|++...   ..+..........++ +++.+|||+|++++||+++++.+++
T Consensus       182 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~---~~~~~~~~~~~~~p~-~r~~~pedvA~~v~~L~s~~~~~it  257 (270)
T 3ftp_A          182 AGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKG---LPQEQQTALKTQIPL-GRLGSPEDIAHAVAFLASPQAGYIT  257 (270)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHH---SCHHHHHHHHTTCTT-CSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhh---cCHHHHHHHHhcCCC-CCCCCHHHHHHHHHHHhCCCcCCcc
Confidence            999999999999999999999999999999998763   222333333444444 8999999999999999999999999


Q ss_pred             ccEEEecCceee
Q 024145          248 GQNLVVDGGFSV  259 (272)
Q Consensus       248 G~~i~~dgG~~~  259 (272)
                      |++|.+|||..+
T Consensus       258 G~~i~vdGG~~~  269 (270)
T 3ftp_A          258 GTTLHVNGGMFM  269 (270)
T ss_dssp             SCEEEESTTSSC
T ss_pred             CcEEEECCCccc
Confidence            999999999864

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.4e-50  Score=344.66  Aligned_cols=250  Identities=28%  Similarity=0.365  Sum_probs=215.2

Q ss_pred             cCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHH
Q 024145            9 PFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVS   85 (272)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (272)
                      .++++++|++|||||++|||++++++|+++|++|++++|+.+..++..+++   +.++.++++|++|+++++++++++.+
T Consensus        22 ~m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  101 (283)
T 3v8b_A           22 SMMNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVL  101 (283)
T ss_dssp             -----CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             hhcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            467889999999999999999999999999999999999998888777766   45799999999999999999999999


Q ss_pred             HhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccc--cCCCCchh
Q 024145           86 KFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEI--AGLGSPAY  163 (272)
Q Consensus        86 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~--~~~~~~~Y  163 (272)
                      ++|++|+||||||+... ..++.+.+.++|++++++|+.+++.++++++|+|.+++.|+||++||..+..  +.++...|
T Consensus       102 ~~g~iD~lVnnAg~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~~~Y  180 (283)
T 3v8b_A          102 KFGHLDIVVANAGINGV-WAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAY  180 (283)
T ss_dssp             HHSCCCEEEECCCCCCC-BCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCSTTCHHH
T ss_pred             HhCCCCEEEECCCCCCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCCCCCCchHH
Confidence            99999999999998643 2678899999999999999999999999999999888889999999999877  77888999


Q ss_pred             hhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHH----HHHhhcCCC-CCCCCChHhHHHHHHHH
Q 024145          164 TISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIE----SSMSQMGNL-KGEFLKTDGIANAALYL  238 (272)
Q Consensus       164 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~----~~~~~~~~~-~~~~~~~~dva~~~~~l  238 (272)
                      ++||+|+++|+++++.|++++||+||+|+||+++|++........+...    +......+. .+++.+|||+|++++||
T Consensus       181 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~pedvA~~v~fL  260 (283)
T 3v8b_A          181 TATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAELIRFL  260 (283)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHHHHSCCCBCTTCSCGGGTTCCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccchhhhhhhhhhhhcCccccCCCCCHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999864322222110    011111111 17889999999999999


Q ss_pred             hcCCCCCccccEEEecCceee
Q 024145          239 ASDESSYVSGQNLVVDGGFSV  259 (272)
Q Consensus       239 ~s~~~~~~~G~~i~~dgG~~~  259 (272)
                      +++++.+++|++|.+|||.++
T Consensus       261 ~s~~a~~itG~~i~vdGG~~~  281 (283)
T 3v8b_A          261 VSERARHVTGSPVWIDGGQGL  281 (283)
T ss_dssp             TSGGGTTCCSCEEEESTTHHH
T ss_pred             cCccccCCcCCEEEECcCccc
Confidence            999999999999999999865

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=100.00  E-value=5.2e-50  Score=338.94  Aligned_cols=247  Identities=28%  Similarity=0.402  Sum_probs=216.9

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      .+++||++|||||++|||++++++|+++|++|++++|+++..++..+++   +.++.++.+|++|+++++++++++.+++
T Consensus         2 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (257)
T 3imf_A            2 NAMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKF   81 (257)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            3578999999999999999999999999999999999998888777766   4579999999999999999999999999


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhc-CCCCceEEEEecccccccCCCCchhhhh
Q 024145           88 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMV-PQQKGCILFTASACTEIAGLGSPAYTIS  166 (272)
Q Consensus        88 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~g~iv~iss~~~~~~~~~~~~Y~~s  166 (272)
                      |++|+||||||....  .++.+.+.++|++++++|+.+++.++++++|+|. ++..|+||++||..+..+.++...|++|
T Consensus        82 g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  159 (257)
T 3imf_A           82 GRIDILINNAAGNFI--CPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAA  159 (257)
T ss_dssp             SCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCTTCHHHHHH
T ss_pred             CCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCCCcHHHHHH
Confidence            999999999998765  7788999999999999999999999999999994 4458999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhc-CCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCC
Q 024145          167 KYGILGLVKCLAAELG-QYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSY  245 (272)
Q Consensus       167 K~a~~~~~~~la~e~~-~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  245 (272)
                      |+|+++|+++++.|++ ++||+||+|+||+++|++........+...+......++ +++.+|||+|++++||+++++.+
T Consensus       160 Kaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~-~r~~~pedvA~~v~~L~s~~~~~  238 (257)
T 3imf_A          160 KAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSVPL-GRLGTPEEIAGLAYYLCSDEAAY  238 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------CCSHHHHTTSTT-CSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHcCchhcC
Confidence            9999999999999997 779999999999999997653221122222333333444 88999999999999999999999


Q ss_pred             ccccEEEecCceeec
Q 024145          246 VSGQNLVVDGGFSVV  260 (272)
Q Consensus       246 ~~G~~i~~dgG~~~~  260 (272)
                      ++|++|.+|||..+.
T Consensus       239 itG~~i~vdGG~~~~  253 (257)
T 3imf_A          239 INGTCMTMDGGQHLH  253 (257)
T ss_dssp             CCSCEEEESTTTTSC
T ss_pred             ccCCEEEECCCcccC
Confidence            999999999998764

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=100.00  E-value=1.6e-49  Score=340.90  Aligned_cols=248  Identities=29%  Similarity=0.439  Sum_probs=213.0

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecC----------------cchHHHHHHHh---CCceEEEEecCC
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQ----------------DKLGEDLADKL---GQDVCYIHCDIS   71 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~----------------~~~~~~~~~~~---~~~~~~~~~D~~   71 (272)
                      .+++||++|||||++|||++++++|+++|++|++++|+                .+..++..+++   +.++.++.+|++
T Consensus         7 ~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~   86 (286)
T 3uve_A            7 GRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVR   86 (286)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTT
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCC
Confidence            46899999999999999999999999999999999887                34444444433   568999999999


Q ss_pred             CHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCC-CceEEEEec
Q 024145           72 NEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ-KGCILFTAS  150 (272)
Q Consensus        72 ~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss  150 (272)
                      |+++++++++++.+++|++|+||||||+.... .++.+.+.++|++++++|+.+++.++++++|+|.+++ .|+||++||
T Consensus        87 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS  165 (286)
T 3uve_A           87 DYDALKAAVDSGVEQLGRLDIIVANAGIGNGG-DTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSS  165 (286)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC-SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECC
T ss_pred             CHHHHHHHHHHHHHHhCCCCEEEECCcccCCC-CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECc
Confidence            99999999999999999999999999987651 2478899999999999999999999999999998755 799999999


Q ss_pred             ccccccCCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCC-----------CCChhHHHHHHhhcC
Q 024145          151 ACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKG-----------GVDPALIESSMSQMG  219 (272)
Q Consensus       151 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~-----------~~~~~~~~~~~~~~~  219 (272)
                      ..+..+.++...|++||+|+++|+++++.|++++||+||+|+||+++|++....           ....+..........
T Consensus       166 ~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (286)
T 3uve_A          166 VGGLKAYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQMFH  245 (286)
T ss_dssp             GGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHTTC
T ss_pred             hhhccCCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhccccccccchhhHHHHHHhhh
Confidence            999999999999999999999999999999999999999999999999997521           011111122211222


Q ss_pred             CCCCCCCChHhHHHHHHHHhcCCCCCccccEEEecCceee
Q 024145          220 NLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSV  259 (272)
Q Consensus       220 ~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~  259 (272)
                      ..++++.+|+|+|++++||+++++++++||+|.+|||.++
T Consensus       246 ~~p~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~l  285 (286)
T 3uve_A          246 TLPIPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSCL  285 (286)
T ss_dssp             SSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             ccCCCcCCHHHHHHHHHHHcCccccCCcCCEEeECCcccc
Confidence            2237889999999999999999999999999999999875

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=100.00  E-value=2e-50  Score=343.97  Aligned_cols=247  Identities=28%  Similarity=0.421  Sum_probs=221.9

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (272)
                      +++++||++|||||++|||++++++|+++|++|++++|+.+..++..+++   +.++.++.+|++|+++++++++++.++
T Consensus        21 ~~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  100 (271)
T 4ibo_A           21 IFDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQ  100 (271)
T ss_dssp             GGCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            56799999999999999999999999999999999999988877776655   568999999999999999999999999


Q ss_pred             hCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhh
Q 024145           87 FGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTIS  166 (272)
Q Consensus        87 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~s  166 (272)
                      ++++|+||||||+...  .++.+.+.++|++.+++|+.+++.++++++|+|.+++.|+||++||..+..+.++...|++|
T Consensus       101 ~g~iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~as  178 (271)
T 4ibo_A          101 GIDVDILVNNAGIQFR--KPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELARATVAPYTVA  178 (271)
T ss_dssp             TCCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHHHH
T ss_pred             CCCCCEEEECCCCCCC--CCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCCCCchhHHHH
Confidence            9999999999998765  67889999999999999999999999999999988888999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCc
Q 024145          167 KYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYV  246 (272)
Q Consensus       167 K~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  246 (272)
                      |+|+++|+++++.|++++||+||+|+||+++|++....... +...+......++ +++.+|||+|++++||+++++.++
T Consensus       179 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~p~-~r~~~pedva~~v~~L~s~~~~~i  256 (271)
T 4ibo_A          179 KGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDN-PEFDAWVKARTPA-KRWGKPQELVGTAVFLSASASDYV  256 (271)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHC-HHHHHHHHHHSTT-CSCBCGGGGHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccC-HHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCccccCC
Confidence            99999999999999999999999999999999987632111 1223333344455 899999999999999999999999


Q ss_pred             cccEEEecCceeec
Q 024145          247 SGQNLVVDGGFSVV  260 (272)
Q Consensus       247 ~G~~i~~dgG~~~~  260 (272)
                      +|++|.+|||....
T Consensus       257 tG~~i~vdGG~~~~  270 (271)
T 4ibo_A          257 NGQIIYVDGGMLSV  270 (271)
T ss_dssp             CSCEEEESTTGGGB
T ss_pred             CCcEEEECCCeecc
Confidence            99999999998753

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=100.00  E-value=1.3e-50  Score=346.20  Aligned_cols=249  Identities=31%  Similarity=0.489  Sum_probs=217.8

Q ss_pred             cCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145            9 PFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      ...+++||++|||||++|||++++++|+++|++|++++|+.+..++..++++.++.++.+|++|+++++++++++.+++|
T Consensus        23 ~~~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  102 (277)
T 3gvc_A           23 NHPDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFG  102 (277)
T ss_dssp             ----CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcC
Confidence            34568999999999999999999999999999999999999988888888888899999999999999999999999999


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHH
Q 024145           89 KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKY  168 (272)
Q Consensus        89 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~  168 (272)
                      ++|+||||||+...  .++.+.+.++|++++++|+.+++.++++++|+|.+++.|+||++||..+..+.++...|++||+
T Consensus       103 ~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKa  180 (277)
T 3gvc_A          103 GVDKLVANAGVVHL--ASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKA  180 (277)
T ss_dssp             SCCEEEECCCCCCC--BCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred             CCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCchhHHHHHH
Confidence            99999999998765  6788999999999999999999999999999999888999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCC-hhHHHHHHhh---cCCCCCCCCChHhHHHHHHHHhcCCCC
Q 024145          169 GILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVD-PALIESSMSQ---MGNLKGEFLKTDGIANAALYLASDESS  244 (272)
Q Consensus       169 a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~~~~dva~~~~~l~s~~~~  244 (272)
                      |+++|+++++.|++++||+||+|+||+++||+....... ..........   ..++ +++.+|||+|++++||++++++
T Consensus       181 a~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-~r~~~pedvA~~v~~L~s~~a~  259 (277)
T 3gvc_A          181 GIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQ-GRMAAPEEMAGIVVFLLSDDAS  259 (277)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC------CCHHHHHHHHH-SSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcchhhHHHHhhhhhhhccc-cCCCCHHHHHHHHHHHcCCccC
Confidence            999999999999999999999999999999986421110 0000000000   1122 7889999999999999999999


Q ss_pred             CccccEEEecCceeec
Q 024145          245 YVSGQNLVVDGGFSVV  260 (272)
Q Consensus       245 ~~~G~~i~~dgG~~~~  260 (272)
                      +++|++|.+|||....
T Consensus       260 ~itG~~i~vdGG~~~~  275 (277)
T 3gvc_A          260 MITGTTQIADGGTIAA  275 (277)
T ss_dssp             TCCSCEEEESTTGGGS
T ss_pred             CccCcEEEECCcchhc
Confidence            9999999999998653

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=100.00  E-value=1.6e-49  Score=333.85  Aligned_cols=240  Identities=30%  Similarity=0.472  Sum_probs=214.0

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCc-chHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQD-KLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~-~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      +.+|++|||||++|||++++++|+++|++|++++|+. +..+++.+++   +.++.++++|++|.++++++++++.++++
T Consensus         2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   81 (246)
T 3osu_A            2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFG   81 (246)
T ss_dssp             CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4689999999999999999999999999999887744 4555554443   56899999999999999999999999999


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHH
Q 024145           89 KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKY  168 (272)
Q Consensus        89 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~  168 (272)
                      ++|+||||||+...  .++.+.+.++|++.+++|+.+++.++++++|+|.+++.|+||++||..+..+.++...|++||+
T Consensus        82 ~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  159 (246)
T 3osu_A           82 SLDVLVNNAGITRD--NLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKA  159 (246)
T ss_dssp             CCCEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHH
T ss_pred             CCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHHHH
Confidence            99999999998765  6788999999999999999999999999999998888899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccc
Q 024145          169 GILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSG  248 (272)
Q Consensus       169 a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  248 (272)
                      |+++|+++++.|++++||++|+|+||+++|++...   ..+...+.+....++ +++.+|+|+|++++||+++++.+++|
T Consensus       160 a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~---~~~~~~~~~~~~~p~-~r~~~~~dva~~v~~l~s~~~~~itG  235 (246)
T 3osu_A          160 GVIGLTKSAARELASRGITVNAVAPGFIVSDMTDA---LSDELKEQMLTQIPL-ARFGQDTDIANTVAFLASDKAKYITG  235 (246)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSC---SCHHHHHHHHTTCTT-CSCBCHHHHHHHHHHHTSGGGTTCCS
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccc---cCHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCccccCCCC
Confidence            99999999999999999999999999999999763   223333333344444 89999999999999999999999999


Q ss_pred             cEEEecCcee
Q 024145          249 QNLVVDGGFS  258 (272)
Q Consensus       249 ~~i~~dgG~~  258 (272)
                      ++|.+|||+.
T Consensus       236 ~~i~vdgG~~  245 (246)
T 3osu_A          236 QTIHVNGGMY  245 (246)
T ss_dssp             CEEEESTTSC
T ss_pred             CEEEeCCCcc
Confidence            9999999975

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=100.00  E-value=1.8e-49  Score=337.81  Aligned_cols=241  Identities=30%  Similarity=0.526  Sum_probs=214.7

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeec-CcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHH
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADV-QDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVS   85 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r-~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (272)
                      .++++||++|||||++|||++++++|+++|++|++++| +.+..+++.+++   +.++.++.+|++|+++++++++++.+
T Consensus        23 ~~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~  102 (269)
T 4dmm_A           23 ALPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIE  102 (269)
T ss_dssp             -CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            35689999999999999999999999999999999888 444455444433   56899999999999999999999999


Q ss_pred             HhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhh
Q 024145           86 KFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTI  165 (272)
Q Consensus        86 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~  165 (272)
                      ++|++|+||||||+...  .++.+.+.++|++++++|+.+++.++++++|+|.+++.|+||++||..+..+.++...|++
T Consensus       103 ~~g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  180 (269)
T 4dmm_A          103 RWGRLDVLVNNAGITRD--TLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYSA  180 (269)
T ss_dssp             HHSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCCTTCHHHHH
T ss_pred             HcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCchhHHH
Confidence            99999999999998765  6788999999999999999999999999999998888899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcC-CCC
Q 024145          166 SKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASD-ESS  244 (272)
Q Consensus       166 sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~-~~~  244 (272)
                      ||+|+++|+++++.|++++||+||+|+||+++|++...      ...+......++ +++.+|+|+|++++||+++ .+.
T Consensus       181 sK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~------~~~~~~~~~~p~-~r~~~~~dvA~~v~~l~s~~~~~  253 (269)
T 4dmm_A          181 AKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSE------LAAEKLLEVIPL-GRYGEAAEVAGVVRFLAADPAAA  253 (269)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCH------HHHHHHGGGCTT-SSCBCHHHHHHHHHHHHHCGGGG
T ss_pred             HHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCccccc------ccHHHHHhcCCC-CCCCCHHHHHHHHHHHhCCcccC
Confidence            99999999999999999999999999999999998752      112333334444 8999999999999999998 788


Q ss_pred             CccccEEEecCceee
Q 024145          245 YVSGQNLVVDGGFSV  259 (272)
Q Consensus       245 ~~~G~~i~~dgG~~~  259 (272)
                      +++|++|.+|||..+
T Consensus       254 ~itG~~i~vdGG~~~  268 (269)
T 4dmm_A          254 YITGQVINIDGGLVM  268 (269)
T ss_dssp             GCCSCEEEESTTSCC
T ss_pred             CCcCCEEEECCCeec
Confidence            999999999999865

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.6e-49  Score=335.84  Aligned_cols=245  Identities=27%  Similarity=0.390  Sum_probs=199.8

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      ++++||++|||||++|||++++++|+++|++|++++|+.+..++..++++.++.++.+|++|+++++++++++.+++|++
T Consensus         3 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   82 (257)
T 3tpc_A            3 MQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHV   82 (257)
T ss_dssp             -CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            46899999999999999999999999999999999999988888888888889999999999999999999999999999


Q ss_pred             cEEEeCCCCCCCCC--CCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCC------CCceEEEEecccccccCCCCch
Q 024145           91 DIMYNNAGILDRSF--GSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQ------QKGCILFTASACTEIAGLGSPA  162 (272)
Q Consensus        91 d~lv~~ag~~~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~------~~g~iv~iss~~~~~~~~~~~~  162 (272)
                      |+||||||......  ....+.+.++|++.+++|+.+++.+++++.|+|.++      +.|+||++||..+..+.++...
T Consensus        83 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  162 (257)
T 3tpc_A           83 HGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQIGQAA  162 (257)
T ss_dssp             CEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTCHH
T ss_pred             CEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCCCCCcc
Confidence            99999999875411  112367899999999999999999999999999874      6799999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCC
Q 024145          163 YTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDE  242 (272)
Q Consensus       163 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  242 (272)
                      |++||+|+++|+++++.|++++||+||+|+||+++|++...   ..+...+.+....++.+++.+|||+|++++||+++ 
T Consensus       163 Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~---~~~~~~~~~~~~~p~~~r~~~~~dva~~v~~l~s~-  238 (257)
T 3tpc_A          163 YAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAG---MPQDVQDALAASVPFPPRLGRAEEYAALVKHICEN-  238 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC-----------------CCSSSSCSCBCHHHHHHHHHHHHHC-
T ss_pred             hHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhcc---CCHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHccc-
Confidence            99999999999999999999999999999999999999763   22222333333344437899999999999999975 


Q ss_pred             CCCccccEEEecCceeec
Q 024145          243 SSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       243 ~~~~~G~~i~~dgG~~~~  260 (272)
                       .+++|++|.+|||..+.
T Consensus       239 -~~itG~~i~vdGG~~~~  255 (257)
T 3tpc_A          239 -TMLNGEVIRLDGALRMA  255 (257)
T ss_dssp             -TTCCSCEEEESTTCCC-
T ss_pred             -CCcCCcEEEECCCccCC
Confidence             79999999999999875

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=100.00  E-value=8.8e-49  Score=338.44  Aligned_cols=248  Identities=30%  Similarity=0.438  Sum_probs=211.9

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecC------------cchHHHHHHH---hCCceEEEEecCCCHHH
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQ------------DKLGEDLADK---LGQDVCYIHCDISNEDE   75 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~------------~~~~~~~~~~---~~~~~~~~~~D~~~~~~   75 (272)
                      .+++||++|||||++|||++++++|+++|++|++++|+            .+..++..++   .+.++.++.+|++|.++
T Consensus        24 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~  103 (299)
T 3t7c_A           24 GKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDA  103 (299)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred             cccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHH
Confidence            46899999999999999999999999999999999887            3444444433   36789999999999999


Q ss_pred             HHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCC-CceEEEEeccccc
Q 024145           76 VINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ-KGCILFTASACTE  154 (272)
Q Consensus        76 ~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~  154 (272)
                      ++++++++.+++|++|+||||||+.... .++.+.+.++|++++++|+.+++.++++++|+|.+++ .|+||++||..+.
T Consensus       104 v~~~~~~~~~~~g~iD~lv~nAg~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~  182 (299)
T 3t7c_A          104 MQAAVDDGVTQLGRLDIVLANAALASEG-TRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGL  182 (299)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCC-CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGT
T ss_pred             HHHHHHHHHHHhCCCCEEEECCCCCCCC-CchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhc
Confidence            9999999999999999999999987652 3488899999999999999999999999999987654 7999999999999


Q ss_pred             ccCCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCC-----------CChhHHHHHHhhcCCCCC
Q 024145          155 IAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGG-----------VDPALIESSMSQMGNLKG  223 (272)
Q Consensus       155 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~-----------~~~~~~~~~~~~~~~~~~  223 (272)
                      .+.++...|++||+|+++|+++++.|++++||+||+|+||+++|++.....           ................++
T Consensus       183 ~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~  262 (299)
T 3t7c_A          183 RGAENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMHVLPI  262 (299)
T ss_dssp             SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHHHSSSSC
T ss_pred             cCCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHHHHHhhhhcccCc
Confidence            999999999999999999999999999999999999999999999875210           001111111111122227


Q ss_pred             CCCChHhHHHHHHHHhcCCCCCccccEEEecCceee
Q 024145          224 EFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSV  259 (272)
Q Consensus       224 ~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~  259 (272)
                      ++.+|||+|++++||+++++++++|++|.+|||..+
T Consensus       263 r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~l  298 (299)
T 3t7c_A          263 PYVEPADISNAILFLVSDDARYITGVSLPVDGGALL  298 (299)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCCCHHHHHHHHHHHhCcccccCcCCEEeeCCCccc
Confidence            889999999999999999999999999999999865

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.2e-49  Score=339.31  Aligned_cols=247  Identities=29%  Similarity=0.431  Sum_probs=209.6

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeec-CcchHHHHHHHh----CCceEEEEecCCCHHHHHHHHHHHH
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADV-QDKLGEDLADKL----GQDVCYIHCDISNEDEVINLVDTAV   84 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r-~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~   84 (272)
                      +.++++|++|||||++|||++++++|+++|++|++++| +.+..++..+++    +.++.++.+|++|+++++++++++.
T Consensus        20 ~~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   99 (281)
T 3v2h_A           20 FQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVA   99 (281)
T ss_dssp             --CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHH
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHH
Confidence            57789999999999999999999999999999999999 445555555544    4679999999999999999999999


Q ss_pred             HHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhh
Q 024145           85 SKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYT  164 (272)
Q Consensus        85 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~  164 (272)
                      +++|++|+||||||+...  .++.+.+.++|++++++|+.+++.++++++|+|.+++.|+||++||..+..+.++...|+
T Consensus       100 ~~~g~iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  177 (281)
T 3v2h_A          100 DRFGGADILVNNAGVQFV--EKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPFKSAYV  177 (281)
T ss_dssp             HHTSSCSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHH
T ss_pred             HHCCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCCCCchHHH
Confidence            999999999999998765  678899999999999999999999999999999888889999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCCh--------h-HHHHHHhhcCCCCCCCCChHhHHHHH
Q 024145          165 ISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDP--------A-LIESSMSQMGNLKGEFLKTDGIANAA  235 (272)
Q Consensus       165 ~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~--------~-~~~~~~~~~~~~~~~~~~~~dva~~~  235 (272)
                      +||+|+++|+++++.|++++||+||+|+||+++|++........        + ...+.+....+. +++.+|+|+|+++
T Consensus       178 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~~edvA~~v  256 (281)
T 3v2h_A          178 AAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPT-KKFITVEQVASLA  256 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----------------------------CCTT-CSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcCCC-CCccCHHHHHHHH
Confidence            99999999999999999999999999999999999876421110        0 011112223344 8899999999999


Q ss_pred             HHHhcCCCCCccccEEEecCceee
Q 024145          236 LYLASDESSYVSGQNLVVDGGFSV  259 (272)
Q Consensus       236 ~~l~s~~~~~~~G~~i~~dgG~~~  259 (272)
                      +||+++++.+++|++|.+|||++.
T Consensus       257 ~~L~s~~a~~itG~~i~vdGG~~~  280 (281)
T 3v2h_A          257 LYLAGDDAAQITGTHVSMDGGWTA  280 (281)
T ss_dssp             HHHHSSGGGGCCSCEEEESTTGGG
T ss_pred             HHHcCCCcCCCCCcEEEECCCccC
Confidence            999999999999999999999865

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=3.2e-49  Score=335.42  Aligned_cols=246  Identities=26%  Similarity=0.339  Sum_probs=217.5

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      ..++||++|||||++|||++++++|+++|++|++++|+.+..+++.+++   +.++.++.+|++|+++++++++++.+++
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   86 (264)
T 3ucx_A            7 GLLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAY   86 (264)
T ss_dssp             CTTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            3479999999999999999999999999999999999988877776655   5689999999999999999999999999


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhH
Q 024145           88 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISK  167 (272)
Q Consensus        88 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK  167 (272)
                      +++|+||||||.... ..++.+.+.++|++++++|+.+++.++++++|+|.+++ |+||++||..+..+.+++..|++||
T Consensus        87 g~id~lv~nAg~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asK  164 (264)
T 3ucx_A           87 GRVDVVINNAFRVPS-MKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK-GAVVNVNSMVVRHSQAKYGAYKMAK  164 (264)
T ss_dssp             SCCSEEEECCCSCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT-CEEEEECCGGGGCCCTTCHHHHHHH
T ss_pred             CCCcEEEECCCCCCC-CCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEECcchhccCCCccHHHHHHH
Confidence            999999999998533 26788999999999999999999999999999998754 9999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCC--------CChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHh
Q 024145          168 YGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGG--------VDPALIESSMSQMGNLKGEFLKTDGIANAALYLA  239 (272)
Q Consensus       168 ~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  239 (272)
                      +|+++|+++++.|++++||+||+|+||+++|++.....        ...++..+......++ +++.+|||+|++++||+
T Consensus       165 aa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~p~dvA~~v~~L~  243 (264)
T 3ucx_A          165 SALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDL-KRLPTEDEVASAILFMA  243 (264)
T ss_dssp             HHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSSS-SSCCBHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccCCc-ccCCCHHHHHHHHHHHc
Confidence            99999999999999999999999999999999865211        1112223333344444 89999999999999999


Q ss_pred             cCCCCCccccEEEecCceee
Q 024145          240 SDESSYVSGQNLVVDGGFSV  259 (272)
Q Consensus       240 s~~~~~~~G~~i~~dgG~~~  259 (272)
                      ++.+++++|++|.+|||.+.
T Consensus       244 s~~~~~itG~~i~vdGG~~~  263 (264)
T 3ucx_A          244 SDLASGITGQALDVNCGEYK  263 (264)
T ss_dssp             SGGGTTCCSCEEEESTTSSC
T ss_pred             CccccCCCCCEEEECCCccC
Confidence            99999999999999999864

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=100.00  E-value=5.4e-49  Score=336.07  Aligned_cols=244  Identities=34%  Similarity=0.508  Sum_probs=216.9

Q ss_pred             cCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHH
Q 024145            9 PFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVS   85 (272)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (272)
                      .+++++||++|||||++|||++++++|+++|++|++++|+.+..+++.+++   +.++.++++|++|+++++++++++.+
T Consensus        26 ~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~  105 (276)
T 3r1i_A           26 DLFDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTG  105 (276)
T ss_dssp             GGGCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            456899999999999999999999999999999999999988887776655   56899999999999999999999999


Q ss_pred             HhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCC-CceEEEEecccccccC--CCCch
Q 024145           86 KFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ-KGCILFTASACTEIAG--LGSPA  162 (272)
Q Consensus        86 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~--~~~~~  162 (272)
                      ++|++|+||||||+...  .++.+.+.++|++.+++|+.+++.++++++|+|.+++ .|+||++||..+..+.  +....
T Consensus       106 ~~g~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~~~~~~  183 (276)
T 3r1i_A          106 ELGGIDIAVCNAGIVSV--QAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSH  183 (276)
T ss_dssp             HHSCCSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCSSCCHH
T ss_pred             HcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCCCCcch
Confidence            99999999999998765  6788999999999999999999999999999998765 4999999999887654  35678


Q ss_pred             hhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCC
Q 024145          163 YTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDE  242 (272)
Q Consensus       163 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  242 (272)
                      |++||+|+++|+++++.|++++||+||+|+||+++|++.+.   ..+ .........++ +++.+|||+|++++||++++
T Consensus       184 Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~---~~~-~~~~~~~~~p~-~r~~~pedvA~~v~fL~s~~  258 (276)
T 3r1i_A          184 YCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEP---LAD-YHALWEPKIPL-GRMGRPEELTGLYLYLASAA  258 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGG---GGG-GHHHHGGGSTT-SSCBCGGGSHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccc---chH-HHHHHHhcCCC-CCCcCHHHHHHHHHHHcCcc
Confidence            99999999999999999999999999999999999999763   222 22333344455 89999999999999999999


Q ss_pred             CCCccccEEEecCceee
Q 024145          243 SSYVSGQNLVVDGGFSV  259 (272)
Q Consensus       243 ~~~~~G~~i~~dgG~~~  259 (272)
                      +++++|++|.+|||++.
T Consensus       259 ~~~itG~~i~vdGG~~~  275 (276)
T 3r1i_A          259 SSYMTGSDIVIDGGYTC  275 (276)
T ss_dssp             GTTCCSCEEEESTTTTC
T ss_pred             ccCccCcEEEECcCccC
Confidence            99999999999999753

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=100.00  E-value=3.1e-49  Score=338.12  Aligned_cols=244  Identities=28%  Similarity=0.361  Sum_probs=215.9

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKFGK   89 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (272)
                      +++|++|||||++|||++++++|+++|++|++++|+.+..++..+++   +.++.++.+|++|.++++++++++.+++|+
T Consensus        22 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  101 (279)
T 3sju_A           22 SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGP  101 (279)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999999999988877776665   568999999999999999999999999999


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHH--hhcCCCCceEEEEecccccccCCCCchhhhhH
Q 024145           90 LDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAAR--VMVPQQKGCILFTASACTEIAGLGSPAYTISK  167 (272)
Q Consensus        90 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK  167 (272)
                      +|+||||||....  .++.+.+.++|++.+++|+.+++.++++++|  .|.+++.|+||++||..+..+.++...|++||
T Consensus       102 id~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asK  179 (279)
T 3sju_A          102 IGILVNSAGRNGG--GETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASK  179 (279)
T ss_dssp             CCEEEECCCCCCC--SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CcEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCCCCChhHHHHH
Confidence            9999999998765  6788999999999999999999999999999  57777789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCC--------CChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHh
Q 024145          168 YGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGG--------VDPALIESSMSQMGNLKGEFLKTDGIANAALYLA  239 (272)
Q Consensus       168 ~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  239 (272)
                      +|+++|+++++.|++++||+||+|+||+++|++.....        ...++..+.+....++ +++.+|||+|++++||+
T Consensus       180 aa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~pedvA~~v~~L~  258 (279)
T 3sju_A          180 HGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPL-GRYSTPEEVAGLVGYLV  258 (279)
T ss_dssp             HHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTCTT-SSCBCHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcCCC-CCCCCHHHHHHHHHHHh
Confidence            99999999999999999999999999999999865310        1223333444444555 89999999999999999


Q ss_pred             cCCCCCccccEEEecCceee
Q 024145          240 SDESSYVSGQNLVVDGGFSV  259 (272)
Q Consensus       240 s~~~~~~~G~~i~~dgG~~~  259 (272)
                      ++++++++|++|.+|||++.
T Consensus       259 s~~a~~itG~~i~vdGG~~~  278 (279)
T 3sju_A          259 TDAAASITAQALNVCGGLGN  278 (279)
T ss_dssp             SSGGGGCCSCEEEESTTCCC
T ss_pred             CccccCcCCcEEEECCCccC
Confidence            99999999999999999753

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=100.00  E-value=1.1e-48  Score=333.06  Aligned_cols=245  Identities=31%  Similarity=0.450  Sum_probs=213.3

Q ss_pred             cCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecC-cchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHH
Q 024145            9 PFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQ-DKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAV   84 (272)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~   84 (272)
                      ...+++||++|||||++|||++++++|+++|++|++++++ .+..+++.+++   +.++.++.+|++|+++++++++++.
T Consensus        12 ~~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   91 (270)
T 3is3_A           12 IPGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAV   91 (270)
T ss_dssp             CTTCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            3567899999999999999999999999999999997765 44444444433   6789999999999999999999999


Q ss_pred             HHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccc-ccccCCCCchh
Q 024145           85 SKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASAC-TEIAGLGSPAY  163 (272)
Q Consensus        85 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~-~~~~~~~~~~Y  163 (272)
                      +++|++|+||||||+...  .++.+.+.++|++++++|+.+++.++++++|+|.+  .|+||++||.. +..+.++...|
T Consensus        92 ~~~g~id~lvnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~~Y  167 (270)
T 3is3_A           92 AHFGHLDIAVSNSGVVSF--GHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTE--GGRIVLTSSNTSKDFSVPKHSLY  167 (270)
T ss_dssp             HHHSCCCEEECCCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT--TCEEEEECCTTTTTCCCTTCHHH
T ss_pred             HHcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCeEEEEeCchhccCCCCCCchh
Confidence            999999999999998765  77889999999999999999999999999999965  68999999988 56788899999


Q ss_pred             hhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCC---------CCChhHHHHHHhhcCCCCCCCCChHhHHHH
Q 024145          164 TISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKG---------GVDPALIESSMSQMGNLKGEFLKTDGIANA  234 (272)
Q Consensus       164 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  234 (272)
                      ++||+|+++|+++++.|++++||+||+|+||+++|++....         ....+...+......++ +++.+|||+|++
T Consensus       168 ~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~p~dvA~~  246 (270)
T 3is3_A          168 SGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPL-HRNGWPQDVANV  246 (270)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHSTT-CSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcCCC-CCCCCHHHHHHH
Confidence            99999999999999999999999999999999999986521         11223333444444555 899999999999


Q ss_pred             HHHHhcCCCCCccccEEEecCcee
Q 024145          235 ALYLASDESSYVSGQNLVVDGGFS  258 (272)
Q Consensus       235 ~~~l~s~~~~~~~G~~i~~dgG~~  258 (272)
                      ++||+++++++++|++|.+|||..
T Consensus       247 v~~L~s~~~~~itG~~i~vdGG~~  270 (270)
T 3is3_A          247 VGFLVSKEGEWVNGKVLTLDGGAA  270 (270)
T ss_dssp             HHHHTSGGGTTCCSCEEEESTTCC
T ss_pred             HHHHcCCccCCccCcEEEeCCCCC
Confidence            999999999999999999999963

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.8e-49  Score=339.64  Aligned_cols=247  Identities=23%  Similarity=0.357  Sum_probs=197.1

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeec-CcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHH
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADV-QDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVS   85 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r-~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (272)
                      |.++++|++|||||++|||++++++|+++|++|++++| +.+..++..+++   +.++.++++|++|+++++++++++.+
T Consensus        24 m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  103 (280)
T 4da9_A           24 MTQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVA  103 (280)
T ss_dssp             CSCCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHH
T ss_pred             hhccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            45689999999999999999999999999999999986 555555555444   56899999999999999999999999


Q ss_pred             HhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCC---CceEEEEecccccccCCCCch
Q 024145           86 KFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ---KGCILFTASACTEIAGLGSPA  162 (272)
Q Consensus        86 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~g~iv~iss~~~~~~~~~~~~  162 (272)
                      ++|++|+||||||+......++.+.+.++|++++++|+.+++.++++++|+|.+++   .|+||++||..+..+.++...
T Consensus       104 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~  183 (280)
T 4da9_A          104 EFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPERLD  183 (280)
T ss_dssp             HHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------CCHH
T ss_pred             HcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCCCCccH
Confidence            99999999999998533336788999999999999999999999999999997654   789999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhh-cCCCCCCCCChHhHHHHHHHHhcC
Q 024145          163 YTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQ-MGNLKGEFLKTDGIANAALYLASD  241 (272)
Q Consensus       163 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~dva~~~~~l~s~  241 (272)
                      |++||+|+++|+++++.|++++||+||+|+||+++|++....   .+........ ..++ +++.+|||+|++++||+++
T Consensus       184 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~---~~~~~~~~~~~~~p~-~r~~~pedvA~~v~~L~s~  259 (280)
T 4da9_A          184 YCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAV---SGKYDGLIESGLVPM-RRWGEPEDIGNIVAGLAGG  259 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC--------------------------CCBCHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhc---chhHHHHHhhcCCCc-CCcCCHHHHHHHHHHHhCc
Confidence            999999999999999999999999999999999999997642   1111122222 3344 8999999999999999999


Q ss_pred             CCCCccccEEEecCceeec
Q 024145          242 ESSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       242 ~~~~~~G~~i~~dgG~~~~  260 (272)
                      ++++++|++|.+|||+.+.
T Consensus       260 ~~~~itG~~i~vdGG~~~~  278 (280)
T 4da9_A          260 QFGFATGSVIQADGGLSIG  278 (280)
T ss_dssp             TTGGGTTCEEEESTTCC--
T ss_pred             cccCCCCCEEEECCCcccC
Confidence            9999999999999998764

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=100.00  E-value=3.5e-49  Score=338.01  Aligned_cols=250  Identities=28%  Similarity=0.354  Sum_probs=220.9

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CC---ceEEEEecCCCHHHHHHHHHHHH
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQ---DVCYIHCDISNEDEVINLVDTAV   84 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~---~~~~~~~D~~~~~~~~~~~~~~~   84 (272)
                      .+++||++|||||++|||++++++|+++|++|++++|+++..++..+++   +.   ++.++.+|++|+++++++++++.
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   86 (281)
T 3svt_A            7 LSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVT   86 (281)
T ss_dssp             -CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             cCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence            5689999999999999999999999999999999999988877776655   22   78999999999999999999999


Q ss_pred             HHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhh
Q 024145           85 SKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYT  164 (272)
Q Consensus        85 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~  164 (272)
                      +++|++|+||||||.... ..++.+.+.++|++++++|+.+++.++++++|+|.+++.|+||++||..+..+.+....|+
T Consensus        87 ~~~g~id~lv~nAg~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  165 (281)
T 3svt_A           87 AWHGRLHGVVHCAGGSEN-IGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGAYG  165 (281)
T ss_dssp             HHHSCCCEEEECCCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTCTHHH
T ss_pred             HHcCCCCEEEECCCcCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCCCChhHH
Confidence            999999999999997433 2678899999999999999999999999999999988899999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCC
Q 024145          165 ISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESS  244 (272)
Q Consensus       165 ~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  244 (272)
                      +||+|+++|+++++.|++++||+||+|+||+++|++........+.. .......++ +++.+|+|+|++++||+++.++
T Consensus       166 asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~-~~~~~~~p~-~r~~~~~dva~~~~~l~s~~~~  243 (281)
T 3svt_A          166 VTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAELS-SDYAMCTPL-PRQGEVEDVANMAMFLLSDAAS  243 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHH-HHHHHHCSS-SSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccCHHHH-HHHHhcCCC-CCCCCHHHHHHHHHHHhCcccC
Confidence            99999999999999999999999999999999999976322222222 223333444 8999999999999999999999


Q ss_pred             CccccEEEecCceeec-cCc
Q 024145          245 YVSGQNLVVDGGFSVV-NPT  263 (272)
Q Consensus       245 ~~~G~~i~~dgG~~~~-~~~  263 (272)
                      +++|++|.+|||..+. .+.
T Consensus       244 ~itG~~~~vdgG~~~~~~~~  263 (281)
T 3svt_A          244 FVTGQVINVDGGQMLRRGPD  263 (281)
T ss_dssp             TCCSCEEEESTTGGGSCCCC
T ss_pred             CCCCCEEEeCCChhcccCCc
Confidence            9999999999999886 444

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=100.00  E-value=6.2e-49  Score=334.14  Aligned_cols=241  Identities=29%  Similarity=0.414  Sum_probs=203.4

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEee-cCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHH
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIAD-VQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVS   85 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~-r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (272)
                      .+.++||++|||||++|||++++++|+++|++|++++ |+.+..+++.+++   +.++.++.+|++|+++++++++++.+
T Consensus        22 ~m~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  101 (267)
T 3u5t_A           22 SMMETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEE  101 (267)
T ss_dssp             -----CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            3456899999999999999999999999999999875 4555555554433   66899999999999999999999999


Q ss_pred             HhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhh
Q 024145           86 KFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTI  165 (272)
Q Consensus        86 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~  165 (272)
                      ++|++|+||||||+...  .++.+.+.++|++++++|+.+++.++++++|+|.+  .|+||++||..+..+.++...|++
T Consensus       102 ~~g~iD~lvnnAG~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~a  177 (267)
T 3u5t_A          102 AFGGVDVLVNNAGIMPL--TTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRV--GGRIINMSTSQVGLLHPSYGIYAA  177 (267)
T ss_dssp             HHSCEEEEEECCCCCCC--CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCTHHHHCCTTCHHHHH
T ss_pred             HcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh--CCeEEEEeChhhccCCCCchHHHH
Confidence            99999999999998765  77889999999999999999999999999999964  589999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCC
Q 024145          166 SKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSY  245 (272)
Q Consensus       166 sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  245 (272)
                      ||+|+++|+++++.|++++||+||+|+||+++|++....  ..+...+.+....++ +++.+|||+|++++||+++++.+
T Consensus       178 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~~~p~-~r~~~pedvA~~v~~L~s~~~~~  254 (267)
T 3u5t_A          178 AKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEG--KSDEVRDRFAKLAPL-ERLGTPQDIAGAVAFLAGPDGAW  254 (267)
T ss_dssp             HHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC-------------CHHHHHTSSTT-CSCBCHHHHHHHHHHHHSTTTTT
T ss_pred             HHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCcccccc--CCHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCccccC
Confidence            999999999999999999999999999999999997632  122223334444555 89999999999999999999999


Q ss_pred             ccccEEEecCce
Q 024145          246 VSGQNLVVDGGF  257 (272)
Q Consensus       246 ~~G~~i~~dgG~  257 (272)
                      ++|++|.+|||+
T Consensus       255 itG~~i~vdGG~  266 (267)
T 3u5t_A          255 VNGQVLRANGGI  266 (267)
T ss_dssp             CCSEEEEESSSC
T ss_pred             ccCCEEEeCCCc
Confidence            999999999996

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-48  Score=328.72  Aligned_cols=242  Identities=29%  Similarity=0.388  Sum_probs=219.6

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      ++++|++|||||++|||++++++|+++|++|++++|+++..+++.+++   +.++.++.+|++|+++++++++++.++++
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (247)
T 3lyl_A            2 SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENL   81 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            578999999999999999999999999999999999988777666554   56899999999999999999999999999


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHH
Q 024145           89 KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKY  168 (272)
Q Consensus        89 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~  168 (272)
                      ++|+||||||+...  .++.+.+.++|++.+++|+.+++.+++.++|+|.+++.|+||++||..+..+.++...|++||+
T Consensus        82 ~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  159 (247)
T 3lyl_A           82 AIDILVNNAGITRD--NLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNPGQTNYCAAKA  159 (247)
T ss_dssp             CCSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHH
T ss_pred             CCCEEEECCCCCCC--CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCcHHHHHHHH
Confidence            99999999998765  6788899999999999999999999999999998888899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccc
Q 024145          169 GILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSG  248 (272)
Q Consensus       169 a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  248 (272)
                      |+++|+++++.|++++||++|+|+||+++|++...   ..+..........+. +++.+|||+|++++||+++++.+++|
T Consensus       160 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~---~~~~~~~~~~~~~~~-~~~~~~~dva~~i~~l~s~~~~~~tG  235 (247)
T 3lyl_A          160 GVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDK---LTDEQKSFIATKIPS-GQIGEPKDIAAAVAFLASEEAKYITG  235 (247)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTT---SCHHHHHHHHTTSTT-CCCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchh---ccHHHHHHHhhcCCC-CCCcCHHHHHHHHHHHhCCCcCCccC
Confidence            99999999999999999999999999999999874   233333344444444 88999999999999999999999999


Q ss_pred             cEEEecCceee
Q 024145          249 QNLVVDGGFSV  259 (272)
Q Consensus       249 ~~i~~dgG~~~  259 (272)
                      ++|.+|||..+
T Consensus       236 ~~i~vdgG~~~  246 (247)
T 3lyl_A          236 QTLHVNGGMYM  246 (247)
T ss_dssp             CEEEESTTSSC
T ss_pred             CEEEECCCEec
Confidence            99999999864

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=4.7e-49  Score=337.07  Aligned_cols=244  Identities=28%  Similarity=0.461  Sum_probs=210.9

Q ss_pred             ccCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeec-------------CcchHHHHHHHh---CCceEEEEecCC
Q 024145            8 APFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADV-------------QDKLGEDLADKL---GQDVCYIHCDIS   71 (272)
Q Consensus         8 ~~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r-------------~~~~~~~~~~~~---~~~~~~~~~D~~   71 (272)
                      ..+.+++||++|||||++|||++++++|+++|++|++++|             +.+..++..+.+   +.++.++.+|++
T Consensus         8 ~~~~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~   87 (280)
T 3pgx_A            8 GQAGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVR   87 (280)
T ss_dssp             ---CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTT
T ss_pred             ccccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCC
Confidence            3467899999999999999999999999999999999988             445555554443   568999999999


Q ss_pred             CHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCC-CceEEEEec
Q 024145           72 NEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ-KGCILFTAS  150 (272)
Q Consensus        72 ~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss  150 (272)
                      |+++++++++++.+++|++|+||||||....  .++.+.+.++|++++++|+.+++.++++++|+|.+++ .|+||++||
T Consensus        88 ~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS  165 (280)
T 3pgx_A           88 DDAALRELVADGMEQFGRLDVVVANAGVLSW--GRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSS  165 (280)
T ss_dssp             CHHHHHHHHHHHHHHHCCCCEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECC
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcc
Confidence            9999999999999999999999999998765  6788999999999999999999999999999998765 799999999


Q ss_pred             ccccccCCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHH-------hh---cCC
Q 024145          151 ACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSM-------SQ---MGN  220 (272)
Q Consensus       151 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~-------~~---~~~  220 (272)
                      ..+..+.++...|++||+|+++|+++++.|++++||+||+|+||+++|++...     ....+..       ..   ...
T Consensus       166 ~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~-----~~~~~~~~~~~~~~~~~~~~~~  240 (280)
T 3pgx_A          166 SAGLKATPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEP-----EAMMEIFARHPSFVHSFPPMPV  240 (280)
T ss_dssp             GGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCH-----HHHHHHHHHCGGGGGGSCCBTT
T ss_pred             hhhccCCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccch-----hhhhhhhhcCchhhhhhhhccc
Confidence            99999999999999999999999999999999999999999999999998652     1100100       00   111


Q ss_pred             CCCCCCChHhHHHHHHHHhcCCCCCccccEEEecCcee
Q 024145          221 LKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFS  258 (272)
Q Consensus       221 ~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~  258 (272)
                      .+.++.+|||+|++++||+++++++++|++|.+|||..
T Consensus       241 ~~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~  278 (280)
T 3pgx_A          241 QPNGFMTADEVADVVAWLAGDGSGTLTGTQIPVDKGAL  278 (280)
T ss_dssp             BCSSCBCHHHHHHHHHHHHSGGGTTCSSCEEEESTTGG
T ss_pred             CCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCcc
Confidence            11368899999999999999999999999999999975

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=100.00  E-value=5.4e-49  Score=336.22  Aligned_cols=245  Identities=27%  Similarity=0.368  Sum_probs=210.6

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeec-------------CcchHHHHHHHh---CCceEEEEecCCCHH
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADV-------------QDKLGEDLADKL---GQDVCYIHCDISNED   74 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r-------------~~~~~~~~~~~~---~~~~~~~~~D~~~~~   74 (272)
                      .+++||++|||||++|||++++++|+++|++|++++|             +.+..++..+.+   +.++.++.+|++|.+
T Consensus         7 ~~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   86 (277)
T 3tsc_A            7 GKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFD   86 (277)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHH
T ss_pred             cccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHH
Confidence            4689999999999999999999999999999999988             344444444333   568999999999999


Q ss_pred             HHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCC-CceEEEEecccc
Q 024145           75 EVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ-KGCILFTASACT  153 (272)
Q Consensus        75 ~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~  153 (272)
                      +++++++++.++++++|+||||||+...  .++.+.+.++|++++++|+.+++.++++++|+|.+++ .|+||++||..+
T Consensus        87 ~v~~~~~~~~~~~g~id~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~  164 (277)
T 3tsc_A           87 RLRKVVDDGVAALGRLDIIVANAGVAAP--QAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAG  164 (277)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGG
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhh
Confidence            9999999999999999999999998765  6788999999999999999999999999999998765 799999999999


Q ss_pred             cccCCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCC--------ChhHHHHHHhhcCCCCCCC
Q 024145          154 EIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGV--------DPALIESSMSQMGNLKGEF  225 (272)
Q Consensus       154 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~--------~~~~~~~~~~~~~~~~~~~  225 (272)
                      ..+.++...|++||+|+++|+++++.|++++||+||+|+||+++|++......        ..+...+......  +.++
T Consensus       165 ~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--p~r~  242 (277)
T 3tsc_A          165 MKMQPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFL--PDWV  242 (277)
T ss_dssp             TSCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHHHHHHHHHHHHTCGGGTTTTCCSS--SCSC
T ss_pred             CCCCCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccchhhhhhhhcccccHHHHHHhhhcc--CCCC
Confidence            99999999999999999999999999999999999999999999999752000        0000011111111  2468


Q ss_pred             CChHhHHHHHHHHhcCCCCCccccEEEecCceee
Q 024145          226 LKTDGIANAALYLASDESSYVSGQNLVVDGGFSV  259 (272)
Q Consensus       226 ~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~  259 (272)
                      .+|||+|++++||+++++++++|++|.+|||.+.
T Consensus       243 ~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~  276 (277)
T 3tsc_A          243 AEPEDIADTVCWLASDESRKVTAAQIPVDQGSTQ  276 (277)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCHHHHHHHHHHHhCccccCCcCCEEeeCCCccc
Confidence            9999999999999999999999999999999753

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=1.5e-48  Score=339.60  Aligned_cols=250  Identities=28%  Similarity=0.474  Sum_probs=213.4

Q ss_pred             cCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecC------------cchHHHHHH---HhCCceEEEEecCCCH
Q 024145            9 PFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQ------------DKLGEDLAD---KLGQDVCYIHCDISNE   73 (272)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~------------~~~~~~~~~---~~~~~~~~~~~D~~~~   73 (272)
                      .|.+++||++|||||++|||++++++|+++|++|++++|+            .+..++..+   ..+.++.++.+|++|+
T Consensus        40 ~m~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~  119 (317)
T 3oec_A           40 RMNRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDL  119 (317)
T ss_dssp             --CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred             hhhccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCH
Confidence            4667899999999999999999999999999999999875            333333333   3367899999999999


Q ss_pred             HHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCC-CceEEEEeccc
Q 024145           74 DEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ-KGCILFTASAC  152 (272)
Q Consensus        74 ~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~  152 (272)
                      ++++++++++.+++|++|+||||||+...  .++.+.+.++|++++++|+.+++.++++++|+|.+++ .|+||++||..
T Consensus       120 ~~v~~~~~~~~~~~g~iD~lVnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~  197 (317)
T 3oec_A          120 ASLQAVVDEALAEFGHIDILVSNVGISNQ--GEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTV  197 (317)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCC--BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGG
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHH
Confidence            99999999999999999999999998765  6788999999999999999999999999999998764 79999999999


Q ss_pred             ccccCCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCC-----------CCChhHHHHHHhhcCCC
Q 024145          153 TEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKG-----------GVDPALIESSMSQMGNL  221 (272)
Q Consensus       153 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~-----------~~~~~~~~~~~~~~~~~  221 (272)
                      +..+.++...|++||+|+++|+++++.|++++||+||+|+||+++|++....           ....+...+........
T Consensus       198 ~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (317)
T 3oec_A          198 GLRGAPGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQLTLL  277 (317)
T ss_dssp             GSSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTTCSSCCHHHHHHHHTTTCSS
T ss_pred             hcCCCCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhhhhhhhhccccchhHHHHHHhhhccC
Confidence            9999999999999999999999999999999999999999999999986420           01111112222222223


Q ss_pred             CCCCCChHhHHHHHHHHhcCCCCCccccEEEecCceeec
Q 024145          222 KGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       222 ~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~  260 (272)
                      ++++.+|||+|++++||+++++++++|++|.+|||..+.
T Consensus       278 p~~~~~pedvA~av~fL~s~~a~~itG~~i~vdGG~~~~  316 (317)
T 3oec_A          278 PIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQLAR  316 (317)
T ss_dssp             SSSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGC
T ss_pred             CCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECcchhhc
Confidence            378899999999999999999999999999999998754

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=100.00  E-value=7.8e-49  Score=332.20  Aligned_cols=251  Identities=33%  Similarity=0.400  Sum_probs=209.6

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGK   89 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (272)
                      .+++++|++|||||++|||++++++|+++|++|++++|+++..+++.++++.++.++.+|++|.++++++++++.+++++
T Consensus         4 ~m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   83 (261)
T 3n74_A            4 SMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGK   83 (261)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            46789999999999999999999999999999999999999998888888889999999999999999999999999999


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCC----CceEEEEecccccccCCCCchhhh
Q 024145           90 LDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ----KGCILFTASACTEIAGLGSPAYTI  165 (272)
Q Consensus        90 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~----~g~iv~iss~~~~~~~~~~~~Y~~  165 (272)
                      +|+||||||.... ..++.+.+.++|++.+++|+.+++.++++++|+|.+++    .++||++||..+..+.+....|++
T Consensus        84 id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~a  162 (261)
T 3n74_A           84 VDILVNNAGIGHK-PQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNA  162 (261)
T ss_dssp             CCEEEECCCCCCC-SCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCTTCHHHHH
T ss_pred             CCEEEECCccCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCCCccHHHH
Confidence            9999999998753 26677889999999999999999999999999997653    688999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCC-ChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCC
Q 024145          166 SKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGV-DPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESS  244 (272)
Q Consensus       166 sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  244 (272)
                      ||+|+++|+++++.|++++||+||+|+||+++|++...... ..+...+.+....+. +++.+|||+|++++||+++++.
T Consensus       163 sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~s~~~~  241 (261)
T 3n74_A          163 TKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPM-GRLLKPDDLAEAAAFLCSPQAS  241 (261)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------------------------CTT-SSCCCHHHHHHHHHHHTSGGGT
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCcHHHHHHHhhcCCc-CCCcCHHHHHHHHHHHcCCccc
Confidence            99999999999999999999999999999999998764321 112222233333444 7899999999999999999999


Q ss_pred             CccccEEEecCceeeccC
Q 024145          245 YVSGQNLVVDGGFSVVNP  262 (272)
Q Consensus       245 ~~~G~~i~~dgG~~~~~~  262 (272)
                      +++|++|.+|||..+...
T Consensus       242 ~itG~~i~vdgG~~~~~~  259 (261)
T 3n74_A          242 MITGVALDVDGGRSIGGR  259 (261)
T ss_dssp             TCCSCEEEESTTTTC---
T ss_pred             CcCCcEEEecCCcccCCC
Confidence            999999999999988643

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=100.00  E-value=3.1e-48  Score=329.45  Aligned_cols=245  Identities=27%  Similarity=0.396  Sum_probs=211.7

Q ss_pred             cCCCCCCcEEEEeCCC-ChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh----CCceEEEEecCCCHHHHHHHHHHH
Q 024145            9 PFKRLEGKVAIITGGA-SGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL----GQDVCYIHCDISNEDEVINLVDTA   83 (272)
Q Consensus         9 ~~~~l~~k~vlItGas-~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~   83 (272)
                      .+.+++||++|||||+ +|||++++++|+++|++|++++|+.+..++..+++    +.++.++.+|++|+++++++++++
T Consensus        16 ~~~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   95 (266)
T 3o38_A           16 GHGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQT   95 (266)
T ss_dssp             CCSTTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHH
Confidence            4667899999999998 59999999999999999999999988877777665    357999999999999999999999


Q ss_pred             HHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCC-CCceEEEEecccccccCCCCch
Q 024145           84 VSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQ-QKGCILFTASACTEIAGLGSPA  162 (272)
Q Consensus        84 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~iss~~~~~~~~~~~~  162 (272)
                      .++++++|+||||||+...  .++.+.+.++|++.+++|+.+++.++++++|+|.++ ..++||++||..+..+.++...
T Consensus        96 ~~~~g~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~  173 (266)
T 3o38_A           96 VEKAGRLDVLVNNAGLGGQ--TPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSH  173 (266)
T ss_dssp             HHHHSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCCTTCHH
T ss_pred             HHHhCCCcEEEECCCcCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCCCCCch
Confidence            9999999999999998765  678899999999999999999999999999999876 6789999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCC
Q 024145          163 YTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDE  242 (272)
Q Consensus       163 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  242 (272)
                      |++||+|+++|+++++.|++++||+||+|+||+++|++.+...  .....+.+....+. +++.+|||+|++++||++++
T Consensus       174 Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~~~~-~r~~~~~dva~~i~~l~s~~  250 (266)
T 3o38_A          174 YAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTS--SSELLDRLASDEAF-GRAAEPWEVAATIAFLASDY  250 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC-------------------CCTT-SSCCCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccC--cHHHHHHHHhcCCc-CCCCCHHHHHHHHHHHcCcc
Confidence            9999999999999999999999999999999999999976421  12222233333344 88999999999999999999


Q ss_pred             CCCccccEEEecCcee
Q 024145          243 SSYVSGQNLVVDGGFS  258 (272)
Q Consensus       243 ~~~~~G~~i~~dgG~~  258 (272)
                      +.+++|++|.+|||++
T Consensus       251 ~~~~tG~~i~vdgG~~  266 (266)
T 3o38_A          251 SSYMTGEVVSVSSQRA  266 (266)
T ss_dssp             GTTCCSCEEEESSCCC
T ss_pred             ccCccCCEEEEcCCcC
Confidence            9999999999999974

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=100.00  E-value=1.2e-49  Score=339.95  Aligned_cols=244  Identities=22%  Similarity=0.300  Sum_probs=216.2

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (272)
                      ..+++||++|||||++|||++++++|+++|++|++++|+++..++..+++   +.++.++.+|++|.++++++++++.+.
T Consensus        28 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (275)
T 4imr_A           28 IFGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAI  107 (275)
T ss_dssp             HHCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHH
T ss_pred             cCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHh
Confidence            35789999999999999999999999999999999999988877776655   678999999999999999999999887


Q ss_pred             hCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhh
Q 024145           87 FGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTIS  166 (272)
Q Consensus        87 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~s  166 (272)
                       +++|+||||||....  .++.+.+.++|++.+++|+.+++.++++++|+|.+++.|+||++||..+..+.+....|++|
T Consensus       108 -g~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~as  184 (275)
T 4imr_A          108 -APVDILVINASAQIN--ATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPKSVVTAYAAT  184 (275)
T ss_dssp             -SCCCEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             -CCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCchhhHHH
Confidence             899999999998765  67889999999999999999999999999999988888999999999999888888889999


Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCC-ChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCC
Q 024145          167 KYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGV-DPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSY  245 (272)
Q Consensus       167 K~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  245 (272)
                      |+|+++|+++++.|++++||+||+|+||+++|++...... .++..........++ +++.+|||+|++++||+++++++
T Consensus       185 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~pedvA~~v~fL~s~~a~~  263 (275)
T 4imr_A          185 KAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLNWM-GRAGRPEEMVGAALFLASEACSF  263 (275)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHHSTT-CSCBCGGGGHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccChHHHHHHHhhcCcc-CCCcCHHHHHHHHHHHcCcccCC
Confidence            9999999999999999999999999999999998653111 122223333333344 89999999999999999999999


Q ss_pred             ccccEEEecCce
Q 024145          246 VSGQNLVVDGGF  257 (272)
Q Consensus       246 ~~G~~i~~dgG~  257 (272)
                      ++|++|.+|||+
T Consensus       264 itG~~i~vdGG~  275 (275)
T 4imr_A          264 MTGETIFLTGGY  275 (275)
T ss_dssp             CCSCEEEESSCC
T ss_pred             CCCCEEEeCCCC
Confidence            999999999995

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=2.8e-48  Score=330.11  Aligned_cols=249  Identities=33%  Similarity=0.489  Sum_probs=216.1

Q ss_pred             CccCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh----CCceEEEEecCCCHHHHHHHHHH
Q 024145            7 AAPFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL----GQDVCYIHCDISNEDEVINLVDT   82 (272)
Q Consensus         7 ~~~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~   82 (272)
                      +.+..++++|++|||||++|||++++++|+++|++|++++|+.+..++..+++    +.++.++.+|++|++++++++++
T Consensus        13 ~~~~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~   92 (267)
T 1vl8_A           13 MKEVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEA   92 (267)
T ss_dssp             ----CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHH
Confidence            34567789999999999999999999999999999999999987776665544    67889999999999999999999


Q ss_pred             HHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccc-ccccCCCCc
Q 024145           83 AVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASAC-TEIAGLGSP  161 (272)
Q Consensus        83 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~-~~~~~~~~~  161 (272)
                      +.++++++|+||||||+...  .++.+.+.++|++++++|+.+++.++++++|+|.+++.|+||++||.. +..+.++..
T Consensus        93 ~~~~~g~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~  170 (267)
T 1vl8_A           93 VKEKFGKLDTVVNAAGINRR--HPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNIS  170 (267)
T ss_dssp             HHHHHSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCH
T ss_pred             HHHHcCCCCEEEECCCcCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhccCCCCCh
Confidence            99999999999999998754  678889999999999999999999999999999887889999999998 888888899


Q ss_pred             hhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcC
Q 024145          162 AYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASD  241 (272)
Q Consensus       162 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  241 (272)
                      .|++||+++++|+++++.|++++||++|+|+||+++|++.......++. ...+....++ +++.+|+|+|++++||+++
T Consensus       171 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~-~~~~~~~~p~-~~~~~p~dvA~~v~~l~s~  248 (267)
T 1vl8_A          171 AYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEK-LDYMLKRIPL-GRTGVPEDLKGVAVFLASE  248 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHH-HHHHHHTCTT-SSCBCGGGGHHHHHHHHSG
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccccccccChHH-HHHHHhhCCC-CCCcCHHHHHHHHHHHcCc
Confidence            9999999999999999999999999999999999999986521111111 1222223344 7899999999999999999


Q ss_pred             CCCCccccEEEecCceee
Q 024145          242 ESSYVSGQNLVVDGGFSV  259 (272)
Q Consensus       242 ~~~~~~G~~i~~dgG~~~  259 (272)
                      ++.+++|++|.+|||+.+
T Consensus       249 ~~~~itG~~i~vdGG~~~  266 (267)
T 1vl8_A          249 EAKYVTGQIIFVDGGWTA  266 (267)
T ss_dssp             GGTTCCSCEEEESTTGGG
T ss_pred             cccCCcCCeEEECCCCCC
Confidence            889999999999999754

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=100.00  E-value=1.4e-48  Score=332.93  Aligned_cols=244  Identities=26%  Similarity=0.398  Sum_probs=212.3

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (272)
                      .++++||++|||||++|||++++++|+++|++|++++|++ ..++..+++   +.++.++.+|++|.++++++. +..++
T Consensus        26 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~-~~~~~  103 (273)
T 3uf0_A           26 PFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTD-GVKEVADEIADGGGSAEAVVADLADLEGAANVA-EELAA  103 (273)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESST-HHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHH-HHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHH-HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHH-HHHHh
Confidence            4678999999999999999999999999999999999764 344444433   567999999999999999984 44566


Q ss_pred             hCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhh
Q 024145           87 FGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTIS  166 (272)
Q Consensus        87 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~s  166 (272)
                      ++++|+||||||+...  .++.+.+.++|++++++|+.+++.++++++|+|.+++.|+||++||..+..+.++...|++|
T Consensus       104 ~g~iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~as  181 (273)
T 3uf0_A          104 TRRVDVLVNNAGIIAR--APAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAAS  181 (273)
T ss_dssp             HSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSCHHHHHH
T ss_pred             cCCCcEEEECCCCCCC--CCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCCCCChhHHHH
Confidence            7899999999998765  77889999999999999999999999999999988888999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCc
Q 024145          167 KYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYV  246 (272)
Q Consensus       167 K~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  246 (272)
                      |+|+++|+++++.|++++||+||+|+||+++|++........+... .+....++ +++.+|||+|++++||++++++++
T Consensus       182 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~-~~~~~~p~-~r~~~pedva~~v~~L~s~~a~~i  259 (273)
T 3uf0_A          182 KHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADDERAA-EITARIPA-GRWATPEDMVGPAVFLASDAASYV  259 (273)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHH-HHHHHSTT-SSCBCGGGGHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccCHHHHH-HHHhcCCC-CCCCCHHHHHHHHHHHhCchhcCC
Confidence            9999999999999999999999999999999998763222222222 23333444 899999999999999999999999


Q ss_pred             cccEEEecCceee
Q 024145          247 SGQNLVVDGGFSV  259 (272)
Q Consensus       247 ~G~~i~~dgG~~~  259 (272)
                      +|++|.+|||...
T Consensus       260 tG~~i~vdGG~~~  272 (273)
T 3uf0_A          260 HGQVLAVDGGWLA  272 (273)
T ss_dssp             CSCEEEESTTGGG
T ss_pred             cCCEEEECcCccC
Confidence            9999999999864

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=100.00  E-value=2.8e-48  Score=330.07  Aligned_cols=250  Identities=29%  Similarity=0.465  Sum_probs=213.8

Q ss_pred             ccCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh-----CCceEEEEecCCCHHHHHHHHHH
Q 024145            8 APFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL-----GQDVCYIHCDISNEDEVINLVDT   82 (272)
Q Consensus         8 ~~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~   82 (272)
                      .+..++++|++|||||++|||++++++|+++|++|++++|+++..++..+++     +.++.++.+|++|++++++++++
T Consensus         6 ~~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   85 (267)
T 1iy8_A            6 SPTTRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTA   85 (267)
T ss_dssp             ----CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHH
Confidence            4456789999999999999999999999999999999999987776665544     56789999999999999999999


Q ss_pred             HHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCch
Q 024145           83 AVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPA  162 (272)
Q Consensus        83 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  162 (272)
                      +.+++|++|+||||||..... .++.+.+.++|++++++|+.+++.++++++|+|.+++.|+||++||..+..+.++...
T Consensus        86 ~~~~~g~id~lv~nAg~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  164 (267)
T 1iy8_A           86 TTERFGRIDGFFNNAGIEGKQ-NPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSG  164 (267)
T ss_dssp             HHHHHSCCSEEEECCCCCCCC-BCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHH
T ss_pred             HHHHcCCCCEEEECCCcCCCC-CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCCCCCcc
Confidence            999999999999999976431 4577889999999999999999999999999998777899999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCC--CCChhHHH---HHHhhcCCCCCCCCChHhHHHHHHH
Q 024145          163 YTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKG--GVDPALIE---SSMSQMGNLKGEFLKTDGIANAALY  237 (272)
Q Consensus       163 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~--~~~~~~~~---~~~~~~~~~~~~~~~~~dva~~~~~  237 (272)
                      |++||+++++|+++++.|++++||+||+|+||+++|++....  ...++...   +.+....++ +++.+|||+|++++|
T Consensus       165 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~~~dvA~~v~~  243 (267)
T 1iy8_A          165 YAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPS-KRYGEAPEIAAVVAF  243 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTT-CSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhccCCC-CCCcCHHHHHHHHHH
Confidence            999999999999999999999999999999999999986421  00011111   122223344 789999999999999


Q ss_pred             HhcCCCCCccccEEEecCceee
Q 024145          238 LASDESSYVSGQNLVVDGGFSV  259 (272)
Q Consensus       238 l~s~~~~~~~G~~i~~dgG~~~  259 (272)
                      |+++++.+++|++|.+|||..+
T Consensus       244 l~s~~~~~~tG~~i~vdGG~~~  265 (267)
T 1iy8_A          244 LLSDDASYVNATVVPIDGGQSA  265 (267)
T ss_dssp             HTSGGGTTCCSCEEEESTTTTT
T ss_pred             HcCccccCCCCCEEEECCCccc
Confidence            9999889999999999999754

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=8.2e-48  Score=323.26  Aligned_cols=239  Identities=36%  Similarity=0.539  Sum_probs=213.3

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   91 (272)
                      ++++|++|||||++|||++++++|+++|++|++++|+++..++..++++  +.++.+|++|+++++++++++.+++|++|
T Consensus         2 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~D~~~~~~~~~~~~~~~~~~g~id   79 (245)
T 1uls_A            2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVG--AHPVVMDVADPASVERGFAEALAHLGRLD   79 (245)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTT--CEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC--CEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            4789999999999999999999999999999999999887777766654  78899999999999999999999999999


Q ss_pred             EEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHHH
Q 024145           92 IMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGIL  171 (272)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~  171 (272)
                      +||||||....  .++.+.+.++|++++++|+.+++.++++++|+|.+++.|+||++||.. ..+.+++..|++||++++
T Consensus        80 ~lvn~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~-~~~~~~~~~Y~asK~a~~  156 (245)
T 1uls_A           80 GVVHYAGITRD--NFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-YLGNLGQANYAASMAGVV  156 (245)
T ss_dssp             EEEECCCCCCC--CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-GGCCTTCHHHHHHHHHHH
T ss_pred             EEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch-hcCCCCchhHHHHHHHHH
Confidence            99999998754  677889999999999999999999999999999887889999999998 888888999999999999


Q ss_pred             HHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccccEE
Q 024145          172 GLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNL  251 (272)
Q Consensus       172 ~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i  251 (272)
                      +|+++++.|++++||++|+|+||+++|++...  .. +...+......+. +++.+|+|+|++++||+++++.+++|++|
T Consensus       157 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~--~~-~~~~~~~~~~~p~-~~~~~~~dvA~~v~~l~s~~~~~~tG~~~  232 (245)
T 1uls_A          157 GLTRTLALELGRWGIRVNTLAPGFIETRMTAK--VP-EKVREKAIAATPL-GRAGKPLEVAYAALFLLSDESSFITGQVL  232 (245)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBCCTTTSS--SC-HHHHHHHHHTCTT-CSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHHHHHHhHhCeEEEEEEeCcCcCcchhh--cC-HHHHHHHHhhCCC-CCCcCHHHHHHHHHHHhCchhcCCcCCEE
Confidence            99999999999999999999999999998763  12 2222222233344 78899999999999999998899999999


Q ss_pred             EecCceee
Q 024145          252 VVDGGFSV  259 (272)
Q Consensus       252 ~~dgG~~~  259 (272)
                      .+|||..+
T Consensus       233 ~vdgG~~~  240 (245)
T 1uls_A          233 FVDGGRTI  240 (245)
T ss_dssp             EESTTTTT
T ss_pred             EECCCccc
Confidence            99999865

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=100.00  E-value=2.1e-48  Score=329.44  Aligned_cols=246  Identities=25%  Similarity=0.360  Sum_probs=202.4

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEe-ecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHH
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIA-DVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVS   85 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~-~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (272)
                      +.+++||++|||||++|||++++++|+++|++|+++ .|+.+..++..+++   +.++.++.+|++|+++++++++++.+
T Consensus         3 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   82 (259)
T 3edm_A            3 LQRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAAD   82 (259)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            567899999999999999999999999999999998 55555555555444   56799999999999999999999999


Q ss_pred             HhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccccc-ccCCCCchhh
Q 024145           86 KFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTE-IAGLGSPAYT  164 (272)
Q Consensus        86 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~-~~~~~~~~Y~  164 (272)
                      ++|++|+||||||.... ..++.+.+.++|++++++|+.+++.++++++|+|.+  .|+||++||..+. .+.++...|+
T Consensus        83 ~~g~id~lv~nAg~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~~Y~  159 (259)
T 3edm_A           83 KFGEIHGLVHVAGGLIA-RKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAK--GGAIVTFSSQAGRDGGGPGALAYA  159 (259)
T ss_dssp             HHCSEEEEEECCCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHHHCCSTTCHHHH
T ss_pred             HhCCCCEEEECCCccCC-CCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCEEEEEcCHHhccCCCCCcHHHH
Confidence            99999999999997633 267889999999999999999999999999999975  6899999999988 6788899999


Q ss_pred             hhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCC
Q 024145          165 ISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESS  244 (272)
Q Consensus       165 ~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  244 (272)
                      +||+|+++|+++++.|++++ |+||+|+||+++|++.....  .++..+......++ +++.+|||+|++++||+++++.
T Consensus       160 asKaa~~~l~~~la~e~~~~-I~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~p~-~r~~~pedva~~v~~L~s~~~~  235 (259)
T 3edm_A          160 TSKGAVMTFTRGLAKEVGPK-IRVNAVCPGMISTTFHDTFT--KPEVRERVAGATSL-KREGSSEDVAGLVAFLASDDAA  235 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHTTT-CEEEEEEECCBCC-------------------------CCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHCCC-CEEEEEEECCCcCccccccc--ChHHHHHHHhcCCC-CCCcCHHHHHHHHHHHcCcccc
Confidence            99999999999999999986 99999999999999976421  12222233333444 8899999999999999999999


Q ss_pred             CccccEEEecCceeeccC
Q 024145          245 YVSGQNLVVDGGFSVVNP  262 (272)
Q Consensus       245 ~~~G~~i~~dgG~~~~~~  262 (272)
                      +++|++|.+|||.....+
T Consensus       236 ~itG~~i~vdGg~~~~~~  253 (259)
T 3edm_A          236 YVTGACYDINGGVLFSEG  253 (259)
T ss_dssp             TCCSCEEEESBCSSBC--
T ss_pred             CccCCEEEECCCcCCCCC
Confidence            999999999999987543

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=100.00  E-value=7.5e-48  Score=332.17  Aligned_cols=249  Identities=24%  Similarity=0.266  Sum_probs=215.5

Q ss_pred             cCCCCCCcEEEEeCCCC--hHHHHHHHHHHHcCCeEEEeecCcchHHHHH---HHhCCceEEEEecCCCHHHHHHHHHHH
Q 024145            9 PFKRLEGKVAIITGGAS--GIGAMAVELFHENGAKVVIADVQDKLGEDLA---DKLGQDVCYIHCDISNEDEVINLVDTA   83 (272)
Q Consensus         9 ~~~~l~~k~vlItGas~--giG~aia~~la~~G~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~~   83 (272)
                      ++.+++||++|||||++  |||++++++|+++|++|++++|+++..+.+.   +.. ..+.++++|++|.++++++++++
T Consensus        24 ~~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~  102 (296)
T 3k31_A           24 TGMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESL-GVKLTVPCDVSDAESVDNMFKVL  102 (296)
T ss_dssp             CCCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHH-TCCEEEECCTTCHHHHHHHHHHH
T ss_pred             chhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc-CCeEEEEcCCCCHHHHHHHHHHH
Confidence            45678999999999997  9999999999999999999999875444333   233 34789999999999999999999


Q ss_pred             HHHhCCccEEEeCCCCCCC--CCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCc
Q 024145           84 VSKFGKLDIMYNNAGILDR--SFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSP  161 (272)
Q Consensus        84 ~~~~g~id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  161 (272)
                      .+++|++|+||||||+...  ...++.+.+.++|++.+++|+.+++.++++++|+|.+  .|+||++||..+..+.+++.
T Consensus       103 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~g~IV~isS~~~~~~~~~~~  180 (296)
T 3k31_A          103 AEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTN--GGSILTLSYYGAEKVVPHYN  180 (296)
T ss_dssp             HHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT--CEEEEEEECGGGTSCCTTTT
T ss_pred             HHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCEEEEEEehhhccCCCCch
Confidence            9999999999999998653  1156788999999999999999999999999999965  79999999999999999999


Q ss_pred             hhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcC
Q 024145          162 AYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASD  241 (272)
Q Consensus       162 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  241 (272)
                      .|++||+|+++|+++++.|++++||+||+|+||+++|++..... ......+......++ +++.+|||+|++++||+++
T Consensus       181 ~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~p~-~r~~~pedvA~~v~fL~s~  258 (296)
T 3k31_A          181 VMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGIS-DFHYILTWNKYNSPL-RRNTTLDDVGGAALYLLSD  258 (296)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCH-HHHHHHHHHHHHSTT-SSCCCHHHHHHHHHHHHSG
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhccc-chHHHHHHHHhcCCC-CCCCCHHHHHHHHHHHcCC
Confidence            99999999999999999999999999999999999999876321 112223333444555 8999999999999999999


Q ss_pred             CCCCccccEEEecCceeeccC
Q 024145          242 ESSYVSGQNLVVDGGFSVVNP  262 (272)
Q Consensus       242 ~~~~~~G~~i~~dgG~~~~~~  262 (272)
                      .+.+++|++|.+|||+++...
T Consensus       259 ~a~~itG~~i~vdGG~~~~~~  279 (296)
T 3k31_A          259 LGRGTTGETVHVDCGYHVVGM  279 (296)
T ss_dssp             GGTTCCSCEEEESTTGGGCSS
T ss_pred             ccCCccCCEEEECCCccccCC
Confidence            999999999999999988643

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=100.00  E-value=8.3e-48  Score=331.40  Aligned_cols=250  Identities=26%  Similarity=0.315  Sum_probs=210.3

Q ss_pred             CccCCCCCCcEEEEeCCC--ChHHHHHHHHHHHcCCeEEEeecCcchHHH---HHHHhCCceEEEEecCCCHHHHHHHHH
Q 024145            7 AAPFKRLEGKVAIITGGA--SGIGAMAVELFHENGAKVVIADVQDKLGED---LADKLGQDVCYIHCDISNEDEVINLVD   81 (272)
Q Consensus         7 ~~~~~~l~~k~vlItGas--~giG~aia~~la~~G~~V~~~~r~~~~~~~---~~~~~~~~~~~~~~D~~~~~~~~~~~~   81 (272)
                      +.++.+++||++|||||+  +|||++++++|+++|++|++++|+++..+.   +.++. .++.++.+|++|.++++++++
T Consensus        23 ~~~~~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~  101 (293)
T 3grk_A           23 TAQSGLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEEL-GAFVAGHCDVADAASIDAVFE  101 (293)
T ss_dssp             ----CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHH-TCEEEEECCTTCHHHHHHHHH
T ss_pred             CcccccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc-CCceEEECCCCCHHHHHHHHH
Confidence            345677999999999999  559999999999999999999998643332   22333 468899999999999999999


Q ss_pred             HHHHHhCCccEEEeCCCCCCC--CCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCC
Q 024145           82 TAVSKFGKLDIMYNNAGILDR--SFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLG  159 (272)
Q Consensus        82 ~~~~~~g~id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~  159 (272)
                      ++.+++|++|+||||||+...  ...++.+.+.++|++.+++|+.+++.++++++|+|.+  .|+||++||..+..+.++
T Consensus       102 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~g~Iv~isS~~~~~~~~~  179 (293)
T 3grk_A          102 TLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMAD--GGSILTLTYYGAEKVMPN  179 (293)
T ss_dssp             HHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTT--CEEEEEEECGGGTSBCTT
T ss_pred             HHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccC--CCEEEEEeehhhccCCCc
Confidence            999999999999999998752  0257888999999999999999999999999999964  799999999999999999


Q ss_pred             CchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHh
Q 024145          160 SPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLA  239 (272)
Q Consensus       160 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  239 (272)
                      +..|++||+|+++|+++++.|++++||+||+|+||+++|++..... ..+...+......++ +++.+|+|+|++++||+
T Consensus       180 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~p~-~r~~~pedvA~~v~~L~  257 (293)
T 3grk_A          180 YNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIG-DFRYILKWNEYNAPL-RRTVTIDEVGDVGLYFL  257 (293)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------C-CHHHHHHHHHHHSTT-SSCCCHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhccc-chHHHHHHHHhcCCC-CCCCCHHHHHHHHHHHc
Confidence            9999999999999999999999999999999999999999876422 223333444444555 89999999999999999


Q ss_pred             cCCCCCccccEEEecCceeecc
Q 024145          240 SDESSYVSGQNLVVDGGFSVVN  261 (272)
Q Consensus       240 s~~~~~~~G~~i~~dgG~~~~~  261 (272)
                      ++.+++++|++|.+|||+.+..
T Consensus       258 s~~~~~itG~~i~vdGG~~~~~  279 (293)
T 3grk_A          258 SDLSRSVTGEVHHADSGYHVIG  279 (293)
T ss_dssp             SGGGTTCCSCEEEESTTGGGBC
T ss_pred             CccccCCcceEEEECCCcccCC
Confidence            9999999999999999998753

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=100.00  E-value=6.2e-48  Score=328.65  Aligned_cols=239  Identities=29%  Similarity=0.448  Sum_probs=209.8

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCc-chHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQD-KLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~-~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (272)
                      .+++||++|||||++|||++++++|+++|++|++++++. +..+++.+++   +.++.++.+|++|+++++++++++.++
T Consensus        27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  106 (271)
T 3v2g_A           27 ISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEA  106 (271)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999986654 4455554444   678999999999999999999999999


Q ss_pred             hCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccccccc-CCCCchhhh
Q 024145           87 FGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIA-GLGSPAYTI  165 (272)
Q Consensus        87 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~-~~~~~~Y~~  165 (272)
                      +|++|+||||||+...  .++.+.+.++|++.+++|+.+++.+++++.|+|.+  .|+||++||..+..+ .++...|++
T Consensus       107 ~g~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~--~g~iv~isS~~~~~~~~~~~~~Y~a  182 (271)
T 3v2g_A          107 LGGLDILVNSAGIWHS--APLEETTVADFDEVMAVNFRAPFVAIRSASRHLGD--GGRIITIGSNLAELVPWPGISLYSA  182 (271)
T ss_dssp             HSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT--TCEEEEECCGGGTCCCSTTCHHHHH
T ss_pred             cCCCcEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCEEEEEeChhhccCCCCCchHHHH
Confidence            9999999999998765  77889999999999999999999999999999954  689999999877665 788999999


Q ss_pred             hHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCC
Q 024145          166 SKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSY  245 (272)
Q Consensus       166 sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  245 (272)
                      ||+|+++|+++++.|++++||+||+|+||+++|++.....   +.. +......+. +++.+|||+|++++||+++++++
T Consensus       183 sKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~---~~~-~~~~~~~~~-~r~~~pedvA~~v~fL~s~~~~~  257 (271)
T 3v2g_A          183 SKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADG---DHA-EAQRERIAT-GSYGEPQDIAGLVAWLAGPQGKF  257 (271)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSC---SSH-HHHHHTCTT-SSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccc---hhH-HHHHhcCCC-CCCCCHHHHHHHHHHHhCcccCC
Confidence            9999999999999999999999999999999999976422   222 222233444 89999999999999999999999


Q ss_pred             ccccEEEecCcee
Q 024145          246 VSGQNLVVDGGFS  258 (272)
Q Consensus       246 ~~G~~i~~dgG~~  258 (272)
                      ++|++|.+|||+.
T Consensus       258 itG~~i~vdGG~~  270 (271)
T 3v2g_A          258 VTGASLTIDGGAN  270 (271)
T ss_dssp             CCSCEEEESTTTT
T ss_pred             ccCCEEEeCcCcc
Confidence            9999999999975

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=3e-48  Score=327.68  Aligned_cols=246  Identities=25%  Similarity=0.383  Sum_probs=213.4

Q ss_pred             ccCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEee-cCcchHHHHHHH---hCCceEEEEecCCCHHHHHHHHHHH
Q 024145            8 APFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIAD-VQDKLGEDLADK---LGQDVCYIHCDISNEDEVINLVDTA   83 (272)
Q Consensus         8 ~~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~-r~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~   83 (272)
                      .+...+++|++|||||++|||++++++|+++|++|++++ |+.+..++..++   .+.++.++.+|++|.++++++++++
T Consensus         6 ~~~~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   85 (256)
T 3ezl_A            6 HHHMVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKV   85 (256)
T ss_dssp             -------CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHH
Confidence            445667999999999999999999999999999999887 555555544443   3568999999999999999999999


Q ss_pred             HHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchh
Q 024145           84 VSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAY  163 (272)
Q Consensus        84 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y  163 (272)
                      .++++++|+||||||+...  .++.+.+.++|++.+++|+.+++.++++++|+|.+++.|+||++||..+..+.++...|
T Consensus        86 ~~~~g~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  163 (256)
T 3ezl_A           86 KAEVGEIDVLVNNAGITRD--VVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNY  163 (256)
T ss_dssp             HHHTCCEEEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSCSCCHHH
T ss_pred             HHhcCCCCEEEECCCCCCC--CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCCCCCccc
Confidence            9999999999999998765  67889999999999999999999999999999998888999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCC
Q 024145          164 TISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDES  243 (272)
Q Consensus       164 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  243 (272)
                      ++||+|+++|+++++.|++++||++++|+||+++|++.+.  ..++.. +.+....+. +++.+|||+|++++||+++++
T Consensus       164 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~--~~~~~~-~~~~~~~~~-~~~~~~~dva~~~~~l~s~~~  239 (256)
T 3ezl_A          164 STAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKA--IRPDVL-EKIVATIPV-RRLGSPDEIGSIVAWLASEES  239 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT--SCHHHH-HHHHHHSTT-SSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccc--cCHHHH-HHHHhcCCC-CCCcCHHHHHHHHHHHhCCcc
Confidence            9999999999999999999999999999999999999874  223333 333333444 789999999999999999999


Q ss_pred             CCccccEEEecCceee
Q 024145          244 SYVSGQNLVVDGGFSV  259 (272)
Q Consensus       244 ~~~~G~~i~~dgG~~~  259 (272)
                      .+++|++|.+|||..+
T Consensus       240 ~~~tG~~i~vdgG~~~  255 (256)
T 3ezl_A          240 GFSTGADFSLNGGLHM  255 (256)
T ss_dssp             TTCCSCEEEESTTSCC
T ss_pred             cCCcCcEEEECCCEeC
Confidence            9999999999999875

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=100.00  E-value=2.1e-48  Score=331.20  Aligned_cols=247  Identities=33%  Similarity=0.470  Sum_probs=213.3

Q ss_pred             CccCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHH
Q 024145            7 AAPFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus         7 ~~~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (272)
                      ..+..+++||++|||||++|||++++++|+++|++|++++|+.+..       ......+.+|++|+++++++++++.++
T Consensus         6 ~~~~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~-------~~~~~~~~~Dv~~~~~v~~~~~~~~~~   78 (269)
T 3vtz_A            6 HHHMEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD-------VNVSDHFKIDVTNEEEVKEAVEKTTKK   78 (269)
T ss_dssp             ----CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C-------TTSSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc-------cCceeEEEecCCCHHHHHHHHHHHHHH
Confidence            3456778999999999999999999999999999999999987643       235778999999999999999999999


Q ss_pred             hCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhh
Q 024145           87 FGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTIS  166 (272)
Q Consensus        87 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~s  166 (272)
                      +|++|+||||||+...  .++.+.+.++|++++++|+.+++.++++++|+|.+++.|+||++||..+..+.++...|++|
T Consensus        79 ~g~iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  156 (269)
T 3vtz_A           79 YGRIDILVNNAGIEQY--SPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKNAAAYVTS  156 (269)
T ss_dssp             HSCCCEEEECCCCCCC--CCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHHHH
T ss_pred             cCCCCEEEECCCcCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCChhHHHH
Confidence            9999999999998765  67888999999999999999999999999999988888999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCC-----CCh---hHHHHHHhhcCCCCCCCCChHhHHHHHHHH
Q 024145          167 KYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGG-----VDP---ALIESSMSQMGNLKGEFLKTDGIANAALYL  238 (272)
Q Consensus       167 K~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~-----~~~---~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  238 (272)
                      |+|+++|+++++.|+++ ||+||+|+||+++|++.....     ...   +...+.+....++ +++.+|||+|++++||
T Consensus       157 Kaa~~~l~~~la~e~~~-~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~pedvA~~v~~L  234 (269)
T 3vtz_A          157 KHALLGLTRSVAIDYAP-KIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPM-GRIGRPEEVAEVVAFL  234 (269)
T ss_dssp             HHHHHHHHHHHHHHHTT-TEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHSTT-SSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcC-CCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcCCC-CCCcCHHHHHHHHHHH
Confidence            99999999999999998 899999999999999864210     000   1222223333444 8999999999999999


Q ss_pred             hcCCCCCccccEEEecCceeeccCcc
Q 024145          239 ASDESSYVSGQNLVVDGGFSVVNPTV  264 (272)
Q Consensus       239 ~s~~~~~~~G~~i~~dgG~~~~~~~~  264 (272)
                      +++.+.+++|++|.+|||.....|..
T Consensus       235 ~s~~~~~itG~~i~vdGG~~~~~~~~  260 (269)
T 3vtz_A          235 ASDRSSFITGACLTVDGGLLSKLPIS  260 (269)
T ss_dssp             HSGGGTTCCSCEEEESTTGGGBCCCC
T ss_pred             hCCccCCCcCcEEEECCCccccCCCC
Confidence            99999999999999999999876654

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=100.00  E-value=1e-48  Score=332.00  Aligned_cols=245  Identities=24%  Similarity=0.367  Sum_probs=205.2

Q ss_pred             cCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCc---chHHHHHHHh---CCceEEEEecCCCHHHHHHHHHH
Q 024145            9 PFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQD---KLGEDLADKL---GQDVCYIHCDISNEDEVINLVDT   82 (272)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~---~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~   82 (272)
                      .+++++||++|||||++|||++++++|+++|++|++++|..   +..+++.+++   +.++.++.+|++|++++++++++
T Consensus         5 ~~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~   84 (262)
T 3ksu_A            5 KYHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDF   84 (262)
T ss_dssp             CCSCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence            46789999999999999999999999999999999987653   3444444444   56899999999999999999999


Q ss_pred             HHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCch
Q 024145           83 AVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPA  162 (272)
Q Consensus        83 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  162 (272)
                      +.++++++|+||||||+...  .++.+.+.++|++++++|+.+++.++++++|+|.  +.|+||++||..+..+.++...
T Consensus        85 ~~~~~g~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~--~~g~iv~isS~~~~~~~~~~~~  160 (262)
T 3ksu_A           85 AEKEFGKVDIAINTVGKVLK--KPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMN--PNGHIITIATSLLAAYTGFYST  160 (262)
T ss_dssp             HHHHHCSEEEEEECCCCCCS--SCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEE--EEEEEEEECCCHHHHHHCCCCC
T ss_pred             HHHHcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhc--CCCEEEEEechhhccCCCCCch
Confidence            99999999999999998765  6788999999999999999999999999999993  4699999999999998899999


Q ss_pred             hhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCC
Q 024145          163 YTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDE  242 (272)
Q Consensus       163 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  242 (272)
                      |++||+|+++|+++++.|++++||+||+|+||+++|++.....  .+..........+. +++.+|||+|++++||+++ 
T Consensus       161 Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~~~-~r~~~pedvA~~v~~L~s~-  236 (262)
T 3ksu_A          161 YAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQE--TKESTAFHKSQAMG-NQLTKIEDIAPIIKFLTTD-  236 (262)
T ss_dssp             -----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC--------------CC-CCSCCGGGTHHHHHHHHTT-
T ss_pred             hHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccC--chHHHHHHHhcCcc-cCCCCHHHHHHHHHHHcCC-
Confidence            9999999999999999999999999999999999999876421  12222222333344 8899999999999999998 


Q ss_pred             CCCccccEEEecCceeecc
Q 024145          243 SSYVSGQNLVVDGGFSVVN  261 (272)
Q Consensus       243 ~~~~~G~~i~~dgG~~~~~  261 (272)
                      +.+++|++|.+|||.....
T Consensus       237 ~~~itG~~i~vdGg~~~~~  255 (262)
T 3ksu_A          237 GWWINGQTIFANGGYTTRE  255 (262)
T ss_dssp             TTTCCSCEEEESTTCCCC-
T ss_pred             CCCccCCEEEECCCccCCC
Confidence            8999999999999988753

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=100.00  E-value=6.5e-48  Score=330.18  Aligned_cols=247  Identities=28%  Similarity=0.430  Sum_probs=213.5

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   91 (272)
                      +++||++|||||++|||++++++|+++|++|++++|+.+..+++.++.+.++.++.+|+++.++++++++++.++++++|
T Consensus         2 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   81 (281)
T 3zv4_A            2 KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKID   81 (281)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCC
Confidence            57899999999999999999999999999999999999888888888888999999999999999999999999999999


Q ss_pred             EEEeCCCCCCCCC---CCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHH
Q 024145           92 IMYNNAGILDRSF---GSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKY  168 (272)
Q Consensus        92 ~lv~~ag~~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~  168 (272)
                      +||||||+.....   ....+.+.++|++++++|+.+++.++++++|+|.++ .|+||++||..+..+.++...|++||+
T Consensus        82 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKa  160 (281)
T 3zv4_A           82 TLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSS-RGSVVFTISNAGFYPNGGGPLYTATKH  160 (281)
T ss_dssp             EEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCGGGTSSSSSCHHHHHHHH
T ss_pred             EEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCeEEEEecchhccCCCCCchhHHHHH
Confidence            9999999864310   122345567899999999999999999999999764 499999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCC-------hhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhc-
Q 024145          169 GILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVD-------PALIESSMSQMGNLKGEFLKTDGIANAALYLAS-  240 (272)
Q Consensus       169 a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s-  240 (272)
                      |+++|+++++.|++++ |+||+|+||+++|++.......       .....+.+....++ +++.+|||+|++++||++ 
T Consensus       161 a~~~l~~~la~e~~~~-Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~pedvA~~v~fL~s~  238 (281)
T 3zv4_A          161 AVVGLVRQMAFELAPH-VRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPI-GRMPALEEYTGAYVFFATR  238 (281)
T ss_dssp             HHHHHHHHHHHHHTTT-SEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTCTT-SSCCCGGGGSHHHHHHHST
T ss_pred             HHHHHHHHHHHHhcCC-CEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcCCC-CCCCCHHHHHHHHHHhhcc
Confidence            9999999999999987 9999999999999987532111       11123334444555 899999999999999999 


Q ss_pred             CCCCCccccEEEecCceeecc
Q 024145          241 DESSYVSGQNLVVDGGFSVVN  261 (272)
Q Consensus       241 ~~~~~~~G~~i~~dgG~~~~~  261 (272)
                      +.+.+++|++|.+|||+++..
T Consensus       239 ~~~~~itG~~i~vdGG~~~~~  259 (281)
T 3zv4_A          239 GDSLPATGALLNYDGGMGVRG  259 (281)
T ss_dssp             TTSTTCSSCEEEESSSGGGCC
T ss_pred             cccccccCcEEEECCCCcccc
Confidence            788899999999999998764

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=100.00  E-value=4.3e-48  Score=325.11  Aligned_cols=241  Identities=34%  Similarity=0.542  Sum_probs=212.6

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeec-CcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADV-QDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r-~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      +++||++|||||++|||++++++|+++|++|++++| +++..++..+++   +.++.++.+|++|+++++++++++.+++
T Consensus         1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (246)
T 2uvd_A            1 MLKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVF   80 (246)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            368999999999999999999999999999999998 666666555544   5678999999999999999999999999


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhH
Q 024145           88 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISK  167 (272)
Q Consensus        88 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK  167 (272)
                      +++|+||||||....  .++.+.+.++|++++++|+.+++.++++++|+|.+++.|+||++||..+..+.++...|++||
T Consensus        81 g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  158 (246)
T 2uvd_A           81 GQVDILVNNAGVTKD--NLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAK  158 (246)
T ss_dssp             SCCCEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTBHHHHHHH
T ss_pred             CCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCCCCCchHHHHH
Confidence            999999999998754  667889999999999999999999999999999877789999999999988888999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCcc
Q 024145          168 YGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVS  247 (272)
Q Consensus       168 ~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  247 (272)
                      +++++|+++++.|++++||++|+|+||+++|++....  .... ...+....+. +++.+|+|+|++++||+++++.+++
T Consensus       159 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~-~~~~~~~~p~-~~~~~~~dvA~~~~~l~s~~~~~~t  234 (246)
T 2uvd_A          159 AGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVL--DENI-KAEMLKLIPA-AQFGEAQDIANAVTFFASDQSKYIT  234 (246)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCC--CTTH-HHHHHHTCTT-CSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhc--CHHH-HHHHHhcCCC-CCCcCHHHHHHHHHHHcCchhcCCC
Confidence            9999999999999999999999999999999987632  1122 2222233344 7899999999999999999889999


Q ss_pred             ccEEEecCcee
Q 024145          248 GQNLVVDGGFS  258 (272)
Q Consensus       248 G~~i~~dgG~~  258 (272)
                      |++|.+|||..
T Consensus       235 G~~~~vdgG~~  245 (246)
T 2uvd_A          235 GQTLNVDGGMV  245 (246)
T ss_dssp             SCEEEESTTSC
T ss_pred             CCEEEECcCcc
Confidence            99999999975

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=100.00  E-value=5.9e-48  Score=332.05  Aligned_cols=245  Identities=29%  Similarity=0.350  Sum_probs=212.6

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchH-HHHH---HHhCCceEEEEecCCCHHHHHHHHHHHHH
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLG-EDLA---DKLGQDVCYIHCDISNEDEVINLVDTAVS   85 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~-~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (272)
                      ..+++||++|||||++|||++++++|+++|++|++++|+.+.. +...   +..+.++.++.+|++|+++++++++++.+
T Consensus        42 ~~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  121 (291)
T 3ijr_A           42 SEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVR  121 (291)
T ss_dssp             CSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            3568999999999999999999999999999999999987643 2222   23366899999999999999999999999


Q ss_pred             HhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhh
Q 024145           86 KFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTI  165 (272)
Q Consensus        86 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~  165 (272)
                      ++|++|+||||||..... .++.+.+.++|++.+++|+.+++.++++++|+|.+  .|+||++||..+..+.+....|++
T Consensus       122 ~~g~iD~lvnnAg~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~a  198 (291)
T 3ijr_A          122 QLGSLNILVNNVAQQYPQ-QGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQ--GDVIINTASIVAYEGNETLIDYSA  198 (291)
T ss_dssp             HHSSCCEEEECCCCCCCC-SSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCT--TCEEEEECCTHHHHCCTTCHHHHH
T ss_pred             HcCCCCEEEECCCCcCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh--CCEEEEEechHhcCCCCCChhHHH
Confidence            999999999999986542 56788899999999999999999999999999954  589999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCC
Q 024145          166 SKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSY  245 (272)
Q Consensus       166 sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  245 (272)
                      ||+|+++|+++++.|++++||+||+|+||+++|++..... . +.....+....++ +++.+|||+|++++||+++++.+
T Consensus       199 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~-~-~~~~~~~~~~~p~-~r~~~p~dvA~~v~~L~s~~~~~  275 (291)
T 3ijr_A          199 TKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSF-D-EKKVSQFGSNVPM-QRPGQPYELAPAYVYLASSDSSY  275 (291)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHS-C-HHHHHHTTTTSTT-SSCBCGGGTHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccC-C-HHHHHHHHccCCC-CCCcCHHHHHHHHHHHhCCccCC
Confidence            9999999999999999999999999999999999865311 1 2222222333344 89999999999999999999999


Q ss_pred             ccccEEEecCceeec
Q 024145          246 VSGQNLVVDGGFSVV  260 (272)
Q Consensus       246 ~~G~~i~~dgG~~~~  260 (272)
                      ++|++|.+|||..+.
T Consensus       276 itG~~i~vdGG~~~~  290 (291)
T 3ijr_A          276 VTGQMIHVNGGVIVN  290 (291)
T ss_dssp             CCSCEEEESSSCCCC
T ss_pred             CcCCEEEECCCcccC
Confidence            999999999998865

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=100.00  E-value=1.4e-47  Score=326.87  Aligned_cols=248  Identities=27%  Similarity=0.328  Sum_probs=212.2

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (272)
                      .++++||++|||||++|||++++++|+++|++|++++|+++..++..+++   +.++.++.+|++|+++++++++++.+.
T Consensus        16 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   95 (273)
T 1ae1_A           16 RWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHV   95 (273)
T ss_dssp             CCCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            35689999999999999999999999999999999999987776665544   567899999999999999999999999


Q ss_pred             h-CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhh
Q 024145           87 F-GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTI  165 (272)
Q Consensus        87 ~-g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~  165 (272)
                      + +++|+||||||....  .++.+.+.++|++.+++|+.+++.++++++|+|.+++.|+||++||..+..+.++...|++
T Consensus        96 ~~g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~a  173 (273)
T 1ae1_A           96 FDGKLNILVNNAGVVIH--KEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSA  173 (273)
T ss_dssp             TTSCCCEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             cCCCCcEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCCCCcchhHH
Confidence            9 999999999998754  6788899999999999999999999999999998777899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCC---hhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCC
Q 024145          166 SKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVD---PALIESSMSQMGNLKGEFLKTDGIANAALYLASDE  242 (272)
Q Consensus       166 sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  242 (272)
                      ||+|++.|+++++.|++++||+||+|+||+++|++.......   .....+......++ +++.+|+|+|++++||++++
T Consensus       174 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~p~dvA~~v~~l~s~~  252 (273)
T 1ae1_A          174 SKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPM-GRAGKPQEVSALIAFLCFPA  252 (273)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTT-CSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCcc
Confidence            999999999999999999999999999999999987532110   11112222223444 78999999999999999999


Q ss_pred             CCCccccEEEecCceeec
Q 024145          243 SSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       243 ~~~~~G~~i~~dgG~~~~  260 (272)
                      +++++|++|.+|||..+.
T Consensus       253 ~~~~tG~~i~vdGG~~~~  270 (273)
T 1ae1_A          253 ASYITGQIIWADGGFTAN  270 (273)
T ss_dssp             GTTCCSCEEEESTTGGGC
T ss_pred             ccCcCCCEEEECCCcccC
Confidence            999999999999998653

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=100.00  E-value=7.7e-48  Score=324.16  Aligned_cols=243  Identities=31%  Similarity=0.425  Sum_probs=206.2

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCc-chHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQD-KLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      ++++|++|||||++|||++++++|+++|++|++++|++ +..++..++.+.++.++.+|++|+++++++++++.++++++
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   83 (249)
T 2ew8_A            4 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRC   83 (249)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCC
Confidence            47899999999999999999999999999999999988 66555445556789999999999999999999999999999


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHH
Q 024145           91 DIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGI  170 (272)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~  170 (272)
                      |+||||||....  .++.+.+.++|++.+++|+.+++.++++++|+|.+++.|+||++||..+..+.++...|++||+++
T Consensus        84 d~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~  161 (249)
T 2ew8_A           84 DILVNNAGIYPL--IPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAAN  161 (249)
T ss_dssp             CEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHHHHHH
T ss_pred             CEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCchhHHHHHHHH
Confidence            999999998755  677889999999999999999999999999999877789999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCCcEEEEEeCCcccCCccc-CCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCcccc
Q 024145          171 LGLVKCLAAELGQYGIRVNCVSPYGLATGMSM-KGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQ  249 (272)
Q Consensus       171 ~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  249 (272)
                      +.|+++++.|++++||++|+|+||+++|++.. ..........+...  .++ +++.+|+|+|++++||+++++++++|+
T Consensus       162 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~--~~~-~~~~~p~dva~~~~~l~s~~~~~~tG~  238 (249)
T 2ew8_A          162 IGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNML--QAI-PRLQVPLDLTGAAAFLASDDASFITGQ  238 (249)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECCC------------------CTT--SSS-CSCCCTHHHHHHHHHHTSGGGTTCCSC
T ss_pred             HHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccccchhhHHHHhh--Ccc-CCCCCHHHHHHHHHHHcCcccCCCCCc
Confidence            99999999999999999999999999999865 21100001111111  233 788999999999999999988999999


Q ss_pred             EEEecCceee
Q 024145          250 NLVVDGGFSV  259 (272)
Q Consensus       250 ~i~~dgG~~~  259 (272)
                      +|.+|||...
T Consensus       239 ~~~vdGG~~~  248 (249)
T 2ew8_A          239 TLAVDGGMVR  248 (249)
T ss_dssp             EEEESSSCCC
T ss_pred             EEEECCCccC
Confidence            9999999754

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=100.00  E-value=5.5e-48  Score=328.62  Aligned_cols=246  Identities=27%  Similarity=0.409  Sum_probs=210.6

Q ss_pred             cCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEee-cCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHH
Q 024145            9 PFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIAD-VQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAV   84 (272)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~-r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~   84 (272)
                      +...+++|++|||||++|||++++++|+++|++|++++ |+.+..++..+++   +.++.++.+|++|.++++++++++.
T Consensus        19 p~~~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   98 (269)
T 3gk3_A           19 PGSMQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVL   98 (269)
T ss_dssp             -----CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             chhhhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHH
Confidence            34447899999999999999999999999999999998 4444444444333   5689999999999999999999999


Q ss_pred             HHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhh
Q 024145           85 SKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYT  164 (272)
Q Consensus        85 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~  164 (272)
                      ++++++|+||||||+...  .++.+.+.++|++.+++|+.+++.+++.++|+|.+++.|+||++||..+..+.++...|+
T Consensus        99 ~~~g~id~li~nAg~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  176 (269)
T 3gk3_A           99 ADFGKVDVLINNAGITRD--ATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYA  176 (269)
T ss_dssp             HHHSCCSEEEECCCCCCC--BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHH
T ss_pred             HHcCCCCEEEECCCcCCC--cchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCCCCcchHH
Confidence            999999999999998765  678889999999999999999999999999999888889999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCC
Q 024145          165 ISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESS  244 (272)
Q Consensus       165 ~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  244 (272)
                      +||+|+++|+++++.|++++||+||+|+||+++|++.....  .+..........+. +++.+|+|+|++++||+++++.
T Consensus       177 asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~--~~~~~~~~~~~~~~-~~~~~p~dvA~~v~~L~s~~~~  253 (269)
T 3gk3_A          177 SAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVP--QDVLEAKILPQIPV-GRLGRPDEVAALIAFLCSDDAG  253 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC---------CCSGGGCTT-SSCBCHHHHHHHHHHHTSTTCT
T ss_pred             HHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhc--hhHHHHHhhhcCCc-CCccCHHHHHHHHHHHhCCCcC
Confidence            99999999999999999999999999999999999987421  11111122223334 7889999999999999999999


Q ss_pred             CccccEEEecCceee
Q 024145          245 YVSGQNLVVDGGFSV  259 (272)
Q Consensus       245 ~~~G~~i~~dgG~~~  259 (272)
                      +++|++|.+|||..+
T Consensus       254 ~itG~~i~vdgG~~~  268 (269)
T 3gk3_A          254 FVTGADLAINGGMHM  268 (269)
T ss_dssp             TCCSCEEEESTTSCC
T ss_pred             CeeCcEEEECCCEeC
Confidence            999999999999875

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=100.00  E-value=8.6e-48  Score=327.77  Aligned_cols=245  Identities=28%  Similarity=0.415  Sum_probs=210.7

Q ss_pred             cCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcc-hHHHHHH---HhCCceEEEEecCCCHHHHHHHHHHHH
Q 024145            9 PFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDK-LGEDLAD---KLGQDVCYIHCDISNEDEVINLVDTAV   84 (272)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~-~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~   84 (272)
                      ..++++||++|||||++|||++++++|+++|++|++++|+.. ..+.+.+   ..+.++.++.+|++|.++++++++++.
T Consensus        23 ~~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~  102 (271)
T 4iin_A           23 NAMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIV  102 (271)
T ss_dssp             -CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             hhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHH
Confidence            356789999999999999999999999999999999999544 3343333   336689999999999999999999999


Q ss_pred             HHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhh
Q 024145           85 SKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYT  164 (272)
Q Consensus        85 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~  164 (272)
                      ++++++|+||||||+...  .++.+.+.++|++.+++|+.+++.+++.++|+|.+++.|+||++||..+..+.++...|+
T Consensus       103 ~~~g~id~li~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  180 (271)
T 4iin_A          103 QSDGGLSYLVNNAGVVRD--KLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMGQTNYS  180 (271)
T ss_dssp             HHHSSCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHH
T ss_pred             HhcCCCCEEEECCCcCCC--cccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCCCCchHhH
Confidence            999999999999998765  677889999999999999999999999999999888889999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCC
Q 024145          165 ISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESS  244 (272)
Q Consensus       165 ~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  244 (272)
                      +||+|++.|+++++.|++++||+||+|+||+++|++.+..   .+..........+. +++.+|+|+|++++||+++++.
T Consensus       181 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~---~~~~~~~~~~~~~~-~~~~~p~dvA~~i~~l~s~~~~  256 (271)
T 4iin_A          181 ASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANL---KDELKADYVKNIPL-NRLGSAKEVAEAVAFLLSDHSS  256 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC---------------CGGGCTT-CSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhh---cHHHHHHHHhcCCc-CCCcCHHHHHHHHHHHhCCCcC
Confidence            9999999999999999999999999999999999997742   22222222333344 7899999999999999999999


Q ss_pred             CccccEEEecCceee
Q 024145          245 YVSGQNLVVDGGFSV  259 (272)
Q Consensus       245 ~~~G~~i~~dgG~~~  259 (272)
                      +++|++|.+|||+.+
T Consensus       257 ~itG~~i~vdGG~~~  271 (271)
T 4iin_A          257 YITGETLKVNGGLYM  271 (271)
T ss_dssp             TCCSCEEEESTTSCC
T ss_pred             CCcCCEEEeCCCeeC
Confidence            999999999999863

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=100.00  E-value=6.8e-48  Score=326.82  Aligned_cols=242  Identities=30%  Similarity=0.497  Sum_probs=213.1

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+..+++.+++   +.++.++.+|++|+++++++++++.++++
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   83 (262)
T 1zem_A            4 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFG   83 (262)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            478999999999999999999999999999999999987777666555   55789999999999999999999999999


Q ss_pred             CccEEEeCCCCC-CCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhH
Q 024145           89 KLDIMYNNAGIL-DRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISK  167 (272)
Q Consensus        89 ~id~lv~~ag~~-~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK  167 (272)
                      ++|+||||||.. ..  .++.+.+.++|++.+++|+.+++.++++++|+|.+++.|+||++||..+..+.+....|++||
T Consensus        84 ~id~lv~nAg~~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  161 (262)
T 1zem_A           84 KIDFLFNNAGYQGAF--APVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSK  161 (262)
T ss_dssp             CCCEEEECCCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHHH
T ss_pred             CCCEEEECCCCCCCC--CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCCchHHHHH
Confidence            999999999986 33  567889999999999999999999999999999877789999999999999989999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCC------------CC-ChhHHHHHHhhcCCCCCCCCChHhHHHH
Q 024145          168 YGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKG------------GV-DPALIESSMSQMGNLKGEFLKTDGIANA  234 (272)
Q Consensus       168 ~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~------------~~-~~~~~~~~~~~~~~~~~~~~~~~dva~~  234 (272)
                      +++++|+++++.|++++||+||+|+||+++|++....            .. .++...+.+....++ +++.+|||+|++
T Consensus       162 ~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~p~dvA~~  240 (262)
T 1zem_A          162 GAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPM-RRYGDINEIPGV  240 (262)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTT-SSCBCGGGSHHH
T ss_pred             HHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHHhcCCC-CCCcCHHHHHHH
Confidence            9999999999999999999999999999999986421            01 111022223333444 889999999999


Q ss_pred             HHHHhcCCCCCccccEEEecCc
Q 024145          235 ALYLASDESSYVSGQNLVVDGG  256 (272)
Q Consensus       235 ~~~l~s~~~~~~~G~~i~~dgG  256 (272)
                      ++||+++++++++|++|.+|||
T Consensus       241 v~~l~s~~~~~itG~~i~vdGG  262 (262)
T 1zem_A          241 VAFLLGDDSSFMTGVNLPIAGG  262 (262)
T ss_dssp             HHHHHSGGGTTCCSCEEEESCC
T ss_pred             HHHHcCchhcCcCCcEEecCCC
Confidence            9999999999999999999998

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=100.00  E-value=1.4e-47  Score=324.51  Aligned_cols=244  Identities=32%  Similarity=0.450  Sum_probs=208.0

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcch-HHHHHHHh----CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKL-GEDLADKL----GQDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~-~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      ++||++|||||++|||++++++|+++|++|++++|+++. .+++.+++    +.++.++.+|++|+++++++++++.+++
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   81 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            678999999999999999999999999999999998876 66655544    5678999999999999999999999999


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhH
Q 024145           88 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISK  167 (272)
Q Consensus        88 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK  167 (272)
                      +++|+||||||....  .++.+.+.++|++++++|+.+++.++++++|+|.+++.|+||++||..+..+.++...|++||
T Consensus        82 g~iD~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  159 (260)
T 1x1t_A           82 GRIDILVNNAGIQHT--ALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAK  159 (260)
T ss_dssp             SCCSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCCCCCchHHHHH
Confidence            999999999998654  677889999999999999999999999999999877789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCC--------hhHHHHHH-hhcCCCCCCCCChHhHHHHHHHH
Q 024145          168 YGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVD--------PALIESSM-SQMGNLKGEFLKTDGIANAALYL  238 (272)
Q Consensus       168 ~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~--------~~~~~~~~-~~~~~~~~~~~~~~dva~~~~~l  238 (272)
                      ++++.|+++++.|++++||++|+|+||+++|++.......        .+...+.+ ....+. +++.+|+|+|++++||
T Consensus       160 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~p~dva~~~~~l  238 (260)
T 1x1t_A          160 HGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPS-LQFVTPEQLGGTAVFL  238 (260)
T ss_dssp             HHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTT-CCCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHhhccCCC-CCCcCHHHHHHHHHHH
Confidence            9999999999999999999999999999999986532110        01111111 222344 7899999999999999


Q ss_pred             hcCCCCCccccEEEecCceee
Q 024145          239 ASDESSYVSGQNLVVDGGFSV  259 (272)
Q Consensus       239 ~s~~~~~~~G~~i~~dgG~~~  259 (272)
                      +++++.+++|++|.+|||..+
T Consensus       239 ~s~~~~~~tG~~~~vdgG~~~  259 (260)
T 1x1t_A          239 ASDAAAQITGTTVSVDGGWTA  259 (260)
T ss_dssp             HSGGGTTCCSCEEEESTTGGG
T ss_pred             hChhhcCCCCCEEEECCCccC
Confidence            999889999999999999753

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=100.00  E-value=2.7e-47  Score=321.38  Aligned_cols=237  Identities=22%  Similarity=0.354  Sum_probs=209.4

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh----CCceEEEEecC--CCHHHHHHHHHHH
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL----GQDVCYIHCDI--SNEDEVINLVDTA   83 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~--~~~~~~~~~~~~~   83 (272)
                      ...++||++|||||++|||++++++|+++|++|++++|+.+..++..+++    +.++.++.+|+  ++.++++++++++
T Consensus         7 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (252)
T 3f1l_A            7 QDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRI   86 (252)
T ss_dssp             TTTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHH
Confidence            34589999999999999999999999999999999999988877666554    34788999999  9999999999999


Q ss_pred             HHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchh
Q 024145           84 VSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAY  163 (272)
Q Consensus        84 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y  163 (272)
                      .+++|++|+||||||+.... .++.+.+.++|++++++|+.+++.++++++|+|.+++.|+||++||..+..+.++...|
T Consensus        87 ~~~~g~id~lv~nAg~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y  165 (252)
T 3f1l_A           87 AVNYPRLDGVLHNAGLLGDV-CPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAY  165 (252)
T ss_dssp             HHHCSCCSEEEECCCCCCCC-SCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCCTTCHHH
T ss_pred             HHhCCCCCEEEECCccCCCC-CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCCCCCchh
Confidence            99999999999999985432 57889999999999999999999999999999998889999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCC
Q 024145          164 TISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDES  243 (272)
Q Consensus       164 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  243 (272)
                      ++||+|+++|+++++.|++++ |+||+|+||+++|++.....          .. .. ..++.+|+|++++++||+++++
T Consensus       166 ~asK~a~~~l~~~la~e~~~~-irvn~v~PG~v~t~~~~~~~----------~~-~~-~~~~~~p~dva~~~~~L~s~~~  232 (252)
T 3f1l_A          166 AASKFATEGMMQVLADEYQQR-LRVNCINPGGTRTAMRASAF----------PT-ED-PQKLKTPADIMPLYLWLMGDDS  232 (252)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTT-CEEEEEECCSBSSHHHHHHC----------TT-CC-GGGSBCTGGGHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHHHhcCC-cEEEEEecCcccCchhhhhC----------Cc-cc-hhccCCHHHHHHHHHHHcCccc
Confidence            999999999999999999987 99999999999998854210          01 11 1467899999999999999999


Q ss_pred             CCccccEEEecCceeec
Q 024145          244 SYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       244 ~~~~G~~i~~dgG~~~~  260 (272)
                      .+++|++|.+|||....
T Consensus       233 ~~itG~~i~vdgG~~~~  249 (252)
T 3f1l_A          233 RRKTGMTFDAQPGRKPG  249 (252)
T ss_dssp             TTCCSCEEESSCC----
T ss_pred             cCCCCCEEEeCCCcCCC
Confidence            99999999999998653

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=1.3e-47  Score=327.42  Aligned_cols=245  Identities=26%  Similarity=0.347  Sum_probs=214.9

Q ss_pred             ccCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhC--CceEEEEecCCCHHHHHHHHHHHHH
Q 024145            8 APFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLG--QDVCYIHCDISNEDEVINLVDTAVS   85 (272)
Q Consensus         8 ~~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~   85 (272)
                      .+++++++|++|||||++|||++++++|+++|++|++++|+++..++..+++.  .++.++.+|++|+++++++++++.+
T Consensus        22 ~~~~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  101 (276)
T 2b4q_A           22 HPYFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGE  101 (276)
T ss_dssp             CTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHH
T ss_pred             ccccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHH
Confidence            34677899999999999999999999999999999999999887777766663  2688999999999999999999999


Q ss_pred             HhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCC----ceEEEEecccccccCCCCc
Q 024145           86 KFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQK----GCILFTASACTEIAGLGSP  161 (272)
Q Consensus        86 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~----g~iv~iss~~~~~~~~~~~  161 (272)
                      +++++|+||||||....  .++.+.+.++|++.+++|+.+++.++++++|.|.+++.    |+||++||..+..+.+...
T Consensus       102 ~~g~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~~~~  179 (276)
T 2b4q_A          102 LSARLDILVNNAGTSWG--AALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQA  179 (276)
T ss_dssp             HCSCCSEEEECCCCCCC--CCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCCCSC
T ss_pred             hcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCCCCc
Confidence            99999999999998765  67888999999999999999999999999999976555    9999999999988888888


Q ss_pred             -hhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhh--cCCCCCCCCChHhHHHHHHHH
Q 024145          162 -AYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQ--MGNLKGEFLKTDGIANAALYL  238 (272)
Q Consensus       162 -~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~dva~~~~~l  238 (272)
                       .|++||+|++.|+++++.|++++||+||+|+||+++|++....   ..........  ..++ +++.+|+|+|++++||
T Consensus       180 ~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~---~~~~~~~~~~~~~~p~-~r~~~p~dvA~~v~~l  255 (276)
T 2b4q_A          180 YAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHI---ANDPQALEADSASIPM-GRWGRPEEMAALAISL  255 (276)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHH---HHCHHHHHHHHHTSTT-SSCCCHHHHHHHHHHH
T ss_pred             cccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhc---chhHHHHHHhhcCCCC-CCcCCHHHHHHHHHHH
Confidence             9999999999999999999999999999999999999986521   0111112222  3344 7899999999999999


Q ss_pred             hcCCCCCccccEEEecCcee
Q 024145          239 ASDESSYVSGQNLVVDGGFS  258 (272)
Q Consensus       239 ~s~~~~~~~G~~i~~dgG~~  258 (272)
                      +++++.+++|++|.+|||..
T Consensus       256 ~s~~~~~~tG~~i~vdGG~~  275 (276)
T 2b4q_A          256 AGTAGAYMTGNVIPIDGGFH  275 (276)
T ss_dssp             HSGGGTTCCSCEEEESTTTT
T ss_pred             hCccccCCCCCEEEeCCCcc
Confidence            99988999999999999974

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=100.00  E-value=1.5e-47  Score=325.64  Aligned_cols=244  Identities=23%  Similarity=0.351  Sum_probs=210.8

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh-----CCceEEEEecCCCHHHHHHHHHHHHH
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL-----GQDVCYIHCDISNEDEVINLVDTAVS   85 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (272)
                      ++++||++|||||++|||++++++|+++|++|++++|+.+..++..+++     +..+.++.+|+++++++++++    +
T Consensus         6 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~----~   81 (267)
T 3t4x_A            6 MQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVI----E   81 (267)
T ss_dssp             CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHH----H
T ss_pred             cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHH----H
Confidence            4689999999999999999999999999999999999988777666655     346889999999999987665    4


Q ss_pred             HhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhh
Q 024145           86 KFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTI  165 (272)
Q Consensus        86 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~  165 (272)
                      +++++|+||||||....  .++.+.+.++|++.+++|+.+++.++++++|+|.+++.|+||++||..+..+.++...|++
T Consensus        82 ~~g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  159 (267)
T 3t4x_A           82 KYPKVDILINNLGIFEP--VEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQEMAHYSA  159 (267)
T ss_dssp             HCCCCSEEEECCCCCCC--CCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             hcCCCCEEEECCCCCCC--CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCCCcchHHHH
Confidence            57899999999998765  6788999999999999999999999999999999888899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCC--------CCChh-HHHHHHhhcCC--CCCCCCChHhHHHH
Q 024145          166 SKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKG--------GVDPA-LIESSMSQMGN--LKGEFLKTDGIANA  234 (272)
Q Consensus       166 sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~--------~~~~~-~~~~~~~~~~~--~~~~~~~~~dva~~  234 (272)
                      ||+|+++|+++++.|++++||+||+|+||+++|++....        ....+ .....+....+  +.+++.+|||+|++
T Consensus       160 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~  239 (267)
T 3t4x_A          160 TKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRPEEIAHL  239 (267)
T ss_dssp             HHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHCTTCSSCSCBCTHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccCCcccccCccCHHHHHHH
Confidence            999999999999999999999999999999999975421        01111 12222222211  23899999999999


Q ss_pred             HHHHhcCCCCCccccEEEecCceeec
Q 024145          235 ALYLASDESSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       235 ~~~l~s~~~~~~~G~~i~~dgG~~~~  260 (272)
                      ++||++++++++||++|.+|||....
T Consensus       240 v~fL~s~~~~~itG~~i~vdGG~~~s  265 (267)
T 3t4x_A          240 VTFLSSPLSSAINGSALRIDGGLVRS  265 (267)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTCSCS
T ss_pred             HHHHcCccccCccCCeEEECCCcccc
Confidence            99999999999999999999998654

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=100.00  E-value=2.8e-48  Score=328.30  Aligned_cols=242  Identities=24%  Similarity=0.386  Sum_probs=200.2

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGK   89 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (272)
                      .+++++|++|||||++|||++++++|+++|++|++++|+.+   +..++++.++.++.+|++|+++++++++.+.+ +++
T Consensus         4 ~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~---~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~-~g~   79 (257)
T 3tl3_A            4 SMEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGE---DVVADLGDRARFAAADVTDEAAVASALDLAET-MGT   79 (257)
T ss_dssp             ------CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCH---HHHHHTCTTEEEEECCTTCHHHHHHHHHHHHH-HSC
T ss_pred             cceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchH---HHHHhcCCceEEEECCCCCHHHHHHHHHHHHH-hCC
Confidence            35689999999999999999999999999999999998543   34556678899999999999999999998877 899


Q ss_pred             ccEEEeCCCCCCCC--CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcC--------CCCceEEEEecccccccCCC
Q 024145           90 LDIMYNNAGILDRS--FGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVP--------QQKGCILFTASACTEIAGLG  159 (272)
Q Consensus        90 id~lv~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--------~~~g~iv~iss~~~~~~~~~  159 (272)
                      +|+||||||.....  ..+..+.+.++|++++++|+.+++.++++++|+|.+        ++.|+||++||..+..+.++
T Consensus        80 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  159 (257)
T 3tl3_A           80 LRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIG  159 (257)
T ss_dssp             EEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCHHH
T ss_pred             CCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCCCC
Confidence            99999999976431  012335889999999999999999999999999987        56899999999999988888


Q ss_pred             CchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHh
Q 024145          160 SPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLA  239 (272)
Q Consensus       160 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  239 (272)
                      +..|++||+|+++|+++++.|++++||+||+|+||+++|++...   ..+...+......+..+++.+|||+|++++||+
T Consensus       160 ~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~---~~~~~~~~~~~~~~~~~r~~~p~dva~~v~~l~  236 (257)
T 3tl3_A          160 QAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLAS---LPEEARASLGKQVPHPSRLGNPDEYGALAVHII  236 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC------CHHHHHHHHHTSSSSCSCBCHHHHHHHHHHHH
T ss_pred             CccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhh---ccHHHHHHHHhcCCCCCCccCHHHHHHHHHHHh
Confidence            89999999999999999999999999999999999999999873   233333333344444478999999999999999


Q ss_pred             cCCCCCccccEEEecCceeec
Q 024145          240 SDESSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       240 s~~~~~~~G~~i~~dgG~~~~  260 (272)
                      ++  .+++|++|.+|||+.+.
T Consensus       237 s~--~~itG~~i~vdGG~~~~  255 (257)
T 3tl3_A          237 EN--PMLNGEVIRLDGAIRMA  255 (257)
T ss_dssp             HC--TTCCSCEEEESTTC---
T ss_pred             cC--CCCCCCEEEECCCccCC
Confidence            86  79999999999998765

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=100.00  E-value=1.3e-47  Score=330.42  Aligned_cols=245  Identities=28%  Similarity=0.352  Sum_probs=211.6

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcc--hHHHHH---HHhCCceEEEEecCCCHHHHHHHHHHHH
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDK--LGEDLA---DKLGQDVCYIHCDISNEDEVINLVDTAV   84 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~--~~~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~~~   84 (272)
                      +.+++||++|||||++|||++++++|+++|++|++++|+..  ..+++.   ++.+.++.++.+|++|.++++++++++.
T Consensus        44 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  123 (294)
T 3r3s_A           44 SGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAR  123 (294)
T ss_dssp             CSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence            45689999999999999999999999999999999988733  233333   3346789999999999999999999999


Q ss_pred             HHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhh
Q 024145           85 SKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYT  164 (272)
Q Consensus        85 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~  164 (272)
                      ++++++|+||||||..... .++.+.+.++|++.+++|+.+++.++++++|+|.+  .|+||++||..+..+.++...|+
T Consensus       124 ~~~g~iD~lv~nAg~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--~g~Iv~isS~~~~~~~~~~~~Y~  200 (294)
T 3r3s_A          124 EALGGLDILALVAGKQTAI-PEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPK--GASIITTSSIQAYQPSPHLLDYA  200 (294)
T ss_dssp             HHHTCCCEEEECCCCCCCC-SSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCT--TCEEEEECCGGGTSCCTTCHHHH
T ss_pred             HHcCCCCEEEECCCCcCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc--CCEEEEECChhhccCCCCchHHH
Confidence            9999999999999986531 56888999999999999999999999999999954  58999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCC
Q 024145          165 ISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESS  244 (272)
Q Consensus       165 ~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  244 (272)
                      +||+|+++|+++++.|++++||+||+|+||+++|++........+.. ..+....++ +++.+|+|+|++++||++++++
T Consensus       201 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~-~~~~~~~p~-~r~~~p~dvA~~v~~L~s~~~~  278 (294)
T 3r3s_A          201 ATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKI-PQFGQQTPM-KRAGQPAELAPVYVYLASQESS  278 (294)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSCGGGS-TTTTTTSTT-SSCBCGGGGHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCCHHHH-HHHHhcCCC-CCCcCHHHHHHHHHHHhCcccc
Confidence            99999999999999999999999999999999999854322222222 222233344 8899999999999999999999


Q ss_pred             CccccEEEecCceee
Q 024145          245 YVSGQNLVVDGGFSV  259 (272)
Q Consensus       245 ~~~G~~i~~dgG~~~  259 (272)
                      +++|++|.+|||.++
T Consensus       279 ~itG~~i~vdGG~~l  293 (294)
T 3r3s_A          279 YVTAEVHGVCGGEHL  293 (294)
T ss_dssp             TCCSCEEEESTTCCC
T ss_pred             CCCCCEEEECCCccC
Confidence            999999999999875

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=1e-47  Score=325.95  Aligned_cols=242  Identities=33%  Similarity=0.510  Sum_probs=211.6

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      .++++|++|||||++|||++++++|+++|++|++++|+++..++..+++..++.++.+|++|+++++++++++.++++++
T Consensus         2 ~~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   81 (263)
T 2a4k_A            2 GRLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRL   81 (263)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            45789999999999999999999999999999999999888888777777789999999999999999999999999999


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHH
Q 024145           91 DIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGI  170 (272)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~  170 (272)
                      |+||||||....  .++.+.+.++|++++++|+.+++.+++++.|+| ++ .|+||++||..+. +.++...|++||+++
T Consensus        82 D~lvnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~-~g~iv~isS~~~~-~~~~~~~Y~asK~a~  156 (263)
T 2a4k_A           82 HGVAHFAGVAHS--ALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVL-EE-GGSLVLTGSVAGL-GAFGLAHYAAGKLGV  156 (263)
T ss_dssp             CEEEEGGGGTTT--TC----CHHHHHHHHHHHHHHHHHHHHHHHHHC-CT-TCEEEEECCCTTC-CHHHHHHHHHCSSHH
T ss_pred             cEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH-hc-CCEEEEEecchhc-CCCCcHHHHHHHHHH
Confidence            999999998755  678889999999999999999999999999999 54 7999999999888 777788999999999


Q ss_pred             HHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccccE
Q 024145          171 LGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQN  250 (272)
Q Consensus       171 ~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~  250 (272)
                      ++|+++++.|++++||++|+|+||+++|++....  . +...+.+....+. +++.+|+|+|++++||+++++.+++|++
T Consensus       157 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~-~~~~~~~~~~~p~-~~~~~p~dvA~~v~~l~s~~~~~~tG~~  232 (263)
T 2a4k_A          157 VGLARTLALELARKGVRVNVLLPGLIQTPMTAGL--P-PWAWEQEVGASPL-GRAGRPEEVAQAALFLLSEESAYITGQA  232 (263)
T ss_dssp             HHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTS--C-HHHHHHHHHTSTT-CSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhc--C-HHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCccccCCcCCE
Confidence            9999999999999999999999999999997631  2 2222223333344 7889999999999999999899999999


Q ss_pred             EEecCceeecc
Q 024145          251 LVVDGGFSVVN  261 (272)
Q Consensus       251 i~~dgG~~~~~  261 (272)
                      |.+|||..+..
T Consensus       233 i~vdgG~~~~~  243 (263)
T 2a4k_A          233 LYVDGGRSIVG  243 (263)
T ss_dssp             EEESTTTTTC-
T ss_pred             EEECCCccccC
Confidence            99999987653

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=100.00  E-value=2.2e-47  Score=328.47  Aligned_cols=244  Identities=24%  Similarity=0.306  Sum_probs=211.3

Q ss_pred             cCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEee-cCcchHHHHHHHh----CCceEEEEecCCCHH---------
Q 024145            9 PFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIAD-VQDKLGEDLADKL----GQDVCYIHCDISNED---------   74 (272)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~-r~~~~~~~~~~~~----~~~~~~~~~D~~~~~---------   74 (272)
                      .|.++++|++|||||++|||++++++|+++|++|++++ |+.+..+++.+++    +.++.++.+|+++.+         
T Consensus         3 ~m~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   82 (291)
T 1e7w_A            3 HMTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADG   82 (291)
T ss_dssp             -----CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----
T ss_pred             CccCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCccccccccccc
Confidence            35678999999999999999999999999999999999 9887776665544    567999999999999         


Q ss_pred             --------HHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCCC--------------HHHHHHHHHHHhHHHHHHHHH
Q 024145           75 --------EVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTP--------------KSDLERLINVNTIGGFLGAKH  132 (272)
Q Consensus        75 --------~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~~l~~~  132 (272)
                              +++++++++.++++++|+||||||+...  .++.+.+              .++|++++++|+.+++.++++
T Consensus        83 ~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~  160 (291)
T 1e7w_A           83 SAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYP--TPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKA  160 (291)
T ss_dssp             CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCC--CCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred             ccccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCC--CChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHH
Confidence                    9999999999999999999999998765  5677788              899999999999999999999


Q ss_pred             HHHhhcCCC------CceEEEEecccccccCCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCC
Q 024145          133 AARVMVPQQ------KGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGV  206 (272)
Q Consensus       133 ~~~~~~~~~------~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~  206 (272)
                      ++|+|.+++      .|+||++||..+..+.++...|++||+++++|+++++.|++++||+||+|+||+++|++ .  . 
T Consensus       161 ~~~~m~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~-~--~-  236 (291)
T 1e7w_A          161 FAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D--M-  236 (291)
T ss_dssp             HHHHHHTSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG-G--S-
T ss_pred             HHHHHHhcCCCCCCCCcEEEEEechhhcCCCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc-c--C-
Confidence            999998766      79999999999999999999999999999999999999999999999999999999999 4  1 


Q ss_pred             ChhHHHHHHhhcCCCCC-CCCChHhHHHHHHHHhcCCCCCccccEEEecCceeec
Q 024145          207 DPALIESSMSQMGNLKG-EFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       207 ~~~~~~~~~~~~~~~~~-~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~  260 (272)
                      .++ ..+.+....++ + ++.+|||+|++++||+++.+.+++|++|.+|||+.+.
T Consensus       237 ~~~-~~~~~~~~~p~-~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~~  289 (291)
T 1e7w_A          237 PPA-VWEGHRSKVPL-YQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT  289 (291)
T ss_dssp             CHH-HHHHHHTTCTT-TTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             CHH-HHHHHHhhCCC-CCCCCCHHHHHHHHHHHhCCcccCccCcEEEECCCcccc
Confidence            222 22223333444 5 8899999999999999999999999999999998653

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=1.6e-47  Score=328.28  Aligned_cols=247  Identities=28%  Similarity=0.399  Sum_probs=206.6

Q ss_pred             ccCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecC------------cchHHHHHH---HhCCceEEEEecCCC
Q 024145            8 APFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQ------------DKLGEDLAD---KLGQDVCYIHCDISN   72 (272)
Q Consensus         8 ~~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~------------~~~~~~~~~---~~~~~~~~~~~D~~~   72 (272)
                      .+|.+++||++|||||++|||++++++|+++|++|++++|+            .+..++..+   ..+.++.++.+|++|
T Consensus         3 ~~m~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   82 (287)
T 3pxx_A            3 GSMGRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRD   82 (287)
T ss_dssp             TSCCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTC
T ss_pred             CcccccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCC
Confidence            45778999999999999999999999999999999999987            333443333   336789999999999


Q ss_pred             HHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccc
Q 024145           73 EDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASAC  152 (272)
Q Consensus        73 ~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~  152 (272)
                      +++++++++++.++++++|+||||||+...  .  .+.+.++|++.+++|+.+++.++++++|+|  ++.|+||++||..
T Consensus        83 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~--~--~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~--~~~g~iv~isS~~  156 (287)
T 3pxx_A           83 RAAVSRELANAVAEFGKLDVVVANAGICPL--G--AHLPVQAFADAFDVDFVGVINTVHAALPYL--TSGASIITTGSVA  156 (287)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCC--C--TTCCTHHHHHHHHHHTHHHHHHHHHHGGGC--CTTCEEEEECCHH
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCcCcc--c--CcCCHHHHHHHhhhhhhhhHHHHHHHHHHh--hcCcEEEEeccch
Confidence            999999999999999999999999998754  2  347889999999999999999999999999  4568999999998


Q ss_pred             ccccC-----------CCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCC---------CChh--H
Q 024145          153 TEIAG-----------LGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGG---------VDPA--L  210 (272)
Q Consensus       153 ~~~~~-----------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~---------~~~~--~  210 (272)
                      +..+.           ++...|++||+|+++|+++++.|++++||+||+|+||+++|++.....         ....  .
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  236 (287)
T 3pxx_A          157 GLIAAAQPPGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRAD  236 (287)
T ss_dssp             HHHHHHCCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHH
T ss_pred             hcccccccccccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhhhccccccchhHH
Confidence            87654           566789999999999999999999999999999999999999975310         0000  0


Q ss_pred             HHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccccEEEecCceeec
Q 024145          211 IESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~  260 (272)
                      ...........++++.+|||+|++++||+++++++++|++|.+|||..+.
T Consensus       237 ~~~~~~~~~~~~~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG~~~~  286 (287)
T 3pxx_A          237 ALLAFPAMQAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAMLK  286 (287)
T ss_dssp             HHHHGGGGCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred             HHhhhhhhcccCCCCCCHHHHHhhHheecchhhcCCCCceEeECchhhhc
Confidence            01111112222378999999999999999999999999999999998753

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=100.00  E-value=7.1e-48  Score=327.42  Aligned_cols=240  Identities=31%  Similarity=0.477  Sum_probs=209.0

Q ss_pred             cCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145            9 PFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      .+.+++||++|||||++|||++++++|+++|++|++++|+.+..+        ....+.+|+++.++++++++++.++++
T Consensus        22 ~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~--------~~~~~~~Dv~~~~~~~~~~~~~~~~~g   93 (266)
T 3uxy_A           22 SMQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIA--------ADLHLPGDLREAAYADGLPGAVAAGLG   93 (266)
T ss_dssp             ----CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSC--------CSEECCCCTTSHHHHHHHHHHHHHHHS
T ss_pred             hhhCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH--------hhhccCcCCCCHHHHHHHHHHHHHhcC
Confidence            467899999999999999999999999999999999999866432        224458999999999999999999999


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHH
Q 024145           89 KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKY  168 (272)
Q Consensus        89 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~  168 (272)
                      ++|+||||||+...  .++.+.+.++|++.+++|+.+++.++++++|+|.+++.|+||++||..+..+.++...|++||+
T Consensus        94 ~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa  171 (266)
T 3uxy_A           94 RLDIVVNNAGVISR--GRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPGPGHALYCLTKA  171 (266)
T ss_dssp             CCCEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCCTTBHHHHHHHH
T ss_pred             CCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCChHHHHHHH
Confidence            99999999998765  6788999999999999999999999999999998888999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCC----CCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCC
Q 024145          169 GILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKG----GVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESS  244 (272)
Q Consensus       169 a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  244 (272)
                      |+++|+++++.|++++||+||+|+||+++|++.+..    ....+...+.+....++ +++.+|||+|++++||+++.++
T Consensus       172 a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~pedvA~~v~~L~s~~~~  250 (266)
T 3uxy_A          172 ALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVPL-GRIAEPEDIADVVLFLASDAAR  250 (266)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTTSTT-SSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCchhc
Confidence            999999999999999999999999999999986521    11122222333344444 8999999999999999999999


Q ss_pred             CccccEEEecCceee
Q 024145          245 YVSGQNLVVDGGFSV  259 (272)
Q Consensus       245 ~~~G~~i~~dgG~~~  259 (272)
                      +++|++|.+|||..+
T Consensus       251 ~itG~~i~vdGG~~~  265 (266)
T 3uxy_A          251 YLCGSLVEVNGGKAV  265 (266)
T ss_dssp             TCCSCEEEESTTCCC
T ss_pred             CCcCCEEEECcCEeC
Confidence            999999999999865

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=100.00  E-value=2.3e-47  Score=323.24  Aligned_cols=238  Identities=21%  Similarity=0.262  Sum_probs=199.8

Q ss_pred             cCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145            9 PFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      .+++++||++|||||++|||++++++|+++|++|++++|+.+...+..++.+  +.++.+|++|+++++++++++.++++
T Consensus        21 ~~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~Dv~~~~~v~~~~~~~~~~~g   98 (260)
T 3gem_A           21 GHMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAG--AVALYGDFSCETGIMAFIDLLKTQTS   98 (260)
T ss_dssp             ------CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHT--CEEEECCTTSHHHHHHHHHHHHHHCS
T ss_pred             cCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcC--CeEEECCCCCHHHHHHHHHHHHHhcC
Confidence            3577899999999999999999999999999999999999877655555544  78899999999999999999999999


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHH
Q 024145           89 KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKY  168 (272)
Q Consensus        89 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~  168 (272)
                      ++|+||||||....  .. .+.+.++|++++++|+.+++.++++++|+|.+++.|+||++||..+..+.++...|++||+
T Consensus        99 ~iD~lv~nAg~~~~--~~-~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa  175 (260)
T 3gem_A           99 SLRAVVHNASEWLA--ET-PGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSSKHIAYCATKA  175 (260)
T ss_dssp             CCSEEEECCCCCCC--CC-TTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCCSSCHHHHHHHH
T ss_pred             CCCEEEECCCccCC--CC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCcHhHHHHHH
Confidence            99999999998754  23 5678899999999999999999999999999888899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccc
Q 024145          169 GILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSG  248 (272)
Q Consensus       169 a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  248 (272)
                      |+++|+++++.|+++ +|+||+|+||+++|++...     ....+......++ +++.+|||+|++++||+  ++.+++|
T Consensus       176 a~~~l~~~la~e~~~-~Irvn~v~PG~v~t~~~~~-----~~~~~~~~~~~p~-~r~~~~edva~~v~~L~--~~~~itG  246 (260)
T 3gem_A          176 GLESLTLSFAARFAP-LVKVNGIAPALLMFQPKDD-----AAYRANALAKSAL-GIEPGAEVIYQSLRYLL--DSTYVTG  246 (260)
T ss_dssp             HHHHHHHHHHHHHTT-TCEEEEEEECTTCC--------------------CCS-CCCCCTHHHHHHHHHHH--HCSSCCS
T ss_pred             HHHHHHHHHHHHHCC-CCEEEEEeecccccCCCCC-----HHHHHHHHhcCCC-CCCCCHHHHHHHHHHHh--hCCCCCC
Confidence            999999999999998 7999999999999987542     1111222223344 78999999999999999  4689999


Q ss_pred             cEEEecCceeec
Q 024145          249 QNLVVDGGFSVV  260 (272)
Q Consensus       249 ~~i~~dgG~~~~  260 (272)
                      ++|.+|||.++.
T Consensus       247 ~~i~vdGG~~~~  258 (260)
T 3gem_A          247 TTLTVNGGRHVK  258 (260)
T ss_dssp             CEEEESTTTTTC
T ss_pred             CEEEECCCcccC
Confidence            999999998875

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=100.00  E-value=3.6e-47  Score=322.00  Aligned_cols=246  Identities=30%  Similarity=0.380  Sum_probs=215.3

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      ++++||++|||||++|||++++++|+++|++|++++|+++..++..+++   +.++.++.+|++|+++++++++++.+++
T Consensus         5 ~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (260)
T 2ae2_A            5 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHF   84 (260)
T ss_dssp             TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4579999999999999999999999999999999999988776665554   5678999999999999999999999999


Q ss_pred             -CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhh
Q 024145           88 -GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTIS  166 (272)
Q Consensus        88 -g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~s  166 (272)
                       +++|+||||||....  .++.+.+.++|++.+++|+.+++.++++++|+|.+++.|+||++||..+..+.++...|++|
T Consensus        85 ~g~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  162 (260)
T 2ae2_A           85 HGKLNILVNNAGIVIY--KEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGAT  162 (260)
T ss_dssp             TTCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             CCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCcchHHHH
Confidence             899999999998754  67788999999999999999999999999999988778999999999999898999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHH--HHHhhcCCCCCCCCChHhHHHHHHHHhcCCCC
Q 024145          167 KYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIE--SSMSQMGNLKGEFLKTDGIANAALYLASDESS  244 (272)
Q Consensus       167 K~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  244 (272)
                      |++++.|+++++.|++++||++|+|+||+++|++............  ..+....+. +++.+|||+|++++||+++++.
T Consensus       163 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dvA~~v~~l~s~~~~  241 (260)
T 2ae2_A          163 KGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCAL-RRMGEPKELAAMVAFLCFPAAS  241 (260)
T ss_dssp             HHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTT-CSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcCCC-CCCCCHHHHHHHHHHHcCcccc
Confidence            9999999999999999999999999999999998653111121111  022222344 7899999999999999999889


Q ss_pred             CccccEEEecCceee
Q 024145          245 YVSGQNLVVDGGFSV  259 (272)
Q Consensus       245 ~~~G~~i~~dgG~~~  259 (272)
                      +++|++|.+|||..+
T Consensus       242 ~~tG~~~~vdgG~~~  256 (260)
T 2ae2_A          242 YVTGQIIYVDGGLMA  256 (260)
T ss_dssp             TCCSCEEEESTTGGG
T ss_pred             CCCCCEEEECCCccc
Confidence            999999999999764

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=100.00  E-value=4.1e-47  Score=322.13  Aligned_cols=246  Identities=28%  Similarity=0.387  Sum_probs=214.7

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh----CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL----GQDVCYIHCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (272)
                      ++++||++|||||++|||++++++|+++|++|++++|+++..++..+++    +.++.++.+|++|+++++++++++.++
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (263)
T 3ai3_A            3 MGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSS   82 (263)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999987776665554    667999999999999999999999999


Q ss_pred             hCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhh
Q 024145           87 FGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTIS  166 (272)
Q Consensus        87 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~s  166 (272)
                      ++++|+||||||....  .++.+.+.++|++.+++|+.+++.++++++|+|.+++.|+||++||..+..+.+....|++|
T Consensus        83 ~g~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  160 (263)
T 3ai3_A           83 FGGADILVNNAGTGSN--ETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVT  160 (263)
T ss_dssp             HSSCSEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             cCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCcchHHHH
Confidence            9999999999998754  67888999999999999999999999999999987778999999999999988999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCC--------ChhHHHHHHhhc-CCCCCCCCChHhHHHHHHH
Q 024145          167 KYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGV--------DPALIESSMSQM-GNLKGEFLKTDGIANAALY  237 (272)
Q Consensus       167 K~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~--------~~~~~~~~~~~~-~~~~~~~~~~~dva~~~~~  237 (272)
                      |++++.++++++.|++++||++|+|+||+++||+......        ..+.....+... .+. +++.+|+|+|++++|
T Consensus       161 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~dvA~~~~~  239 (263)
T 3ai3_A          161 KAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPI-KRFASPEELANFFVF  239 (263)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHHCTT-CSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcCCCC-CCCcCHHHHHHHHHH
Confidence            9999999999999999999999999999999998542100        011111112222 344 789999999999999


Q ss_pred             HhcCCCCCccccEEEecCceee
Q 024145          238 LASDESSYVSGQNLVVDGGFSV  259 (272)
Q Consensus       238 l~s~~~~~~~G~~i~~dgG~~~  259 (272)
                      |++++..+++|++|.+|||..+
T Consensus       240 l~s~~~~~~~G~~~~vdgG~~~  261 (263)
T 3ai3_A          240 LCSERATYSVGSAYFVDGGMLK  261 (263)
T ss_dssp             HTSTTCTTCCSCEEEESTTCCC
T ss_pred             HcCccccCCCCcEEEECCCccc
Confidence            9999889999999999999765

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=100.00  E-value=2.2e-47  Score=323.00  Aligned_cols=242  Identities=29%  Similarity=0.410  Sum_probs=211.2

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcch--HHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKL--GEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKFGK   89 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~--~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (272)
                      +|++|||||++|||++++++|+++|++|++++|+.+.  .++..+++   +.++.++.+|++|+++++++++++.+++++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   81 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGG   81 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            7899999999999999999999999999999998876  66655554   567899999999999999999999999999


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCC-ceEEEEecccccccCCCCchhhhhHH
Q 024145           90 LDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQK-GCILFTASACTEIAGLGSPAYTISKY  168 (272)
Q Consensus        90 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-g~iv~iss~~~~~~~~~~~~Y~~sK~  168 (272)
                      +|+||||||....  .++.+.+.++|++++++|+.+++.++++++|+|.+++. |+||++||..+..+.++...|++||+
T Consensus        82 iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  159 (258)
T 3a28_C           82 FDVLVNNAGIAQI--KPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKF  159 (258)
T ss_dssp             CCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCEEEECCCCCCC--CChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCCCCchhHHHHHH
Confidence            9999999998755  67888999999999999999999999999999987666 99999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCC--------CChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhc
Q 024145          169 GILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGG--------VDPALIESSMSQMGNLKGEFLKTDGIANAALYLAS  240 (272)
Q Consensus       169 a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  240 (272)
                      ++++|+++++.|++++||+||+|+||+++|++.....        ...+...+.+....++ +++.+|+|+|++++||++
T Consensus       160 a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~p~dvA~~v~~l~s  238 (258)
T 3a28_C          160 AVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIAL-GRPSVPEDVAGLVSFLAS  238 (258)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHHTTCTT-SSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhhhccccCCchHHHHHHHHhcCCC-CCccCHHHHHHHHHHHhC
Confidence            9999999999999999999999999999999865210        0001111222222344 789999999999999999


Q ss_pred             CCCCCccccEEEecCceee
Q 024145          241 DESSYVSGQNLVVDGGFSV  259 (272)
Q Consensus       241 ~~~~~~~G~~i~~dgG~~~  259 (272)
                      +.+.+++|++|.+|||..+
T Consensus       239 ~~~~~~tG~~i~vdGG~~~  257 (258)
T 3a28_C          239 ENSNYVTGQVMLVDGGMLY  257 (258)
T ss_dssp             GGGTTCCSCEEEESSSSCC
T ss_pred             cccCCCCCCEEEECCCEec
Confidence            9999999999999999754

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=100.00  E-value=2.2e-47  Score=324.33  Aligned_cols=243  Identities=29%  Similarity=0.445  Sum_probs=214.8

Q ss_pred             CCCCCCcEEEEeCCC--ChHHHHHHHHHHHcCCeEEEeecCcchH-HHHH----HHhCCceEEEEecCCCHHHHHHHHHH
Q 024145           10 FKRLEGKVAIITGGA--SGIGAMAVELFHENGAKVVIADVQDKLG-EDLA----DKLGQDVCYIHCDISNEDEVINLVDT   82 (272)
Q Consensus        10 ~~~l~~k~vlItGas--~giG~aia~~la~~G~~V~~~~r~~~~~-~~~~----~~~~~~~~~~~~D~~~~~~~~~~~~~   82 (272)
                      +.+++||++|||||+  +|||++++++|+++|++|++++|+.... ++..    +..+.++.++.+|++|++++++++++
T Consensus        15 ~~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~   94 (267)
T 3gdg_A           15 QLSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKD   94 (267)
T ss_dssp             HHCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHH
T ss_pred             ccCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHH
Confidence            467899999999999  9999999999999999999998876543 3333    33467899999999999999999999


Q ss_pred             HHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccC--CCC
Q 024145           83 AVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAG--LGS  160 (272)
Q Consensus        83 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~--~~~  160 (272)
                      +.++++++|+||||||+...  .++.+.+.++|++.+++|+.+++.++++++|+|.+++.|+||++||..+..+.  ++.
T Consensus        95 ~~~~~g~id~li~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  172 (267)
T 3gdg_A           95 VVADFGQIDAFIANAGATAD--SGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQ  172 (267)
T ss_dssp             HHHHTSCCSEEEECCCCCCC--SCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCSSSCC
T ss_pred             HHHHcCCCCEEEECCCcCCC--CCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccCCCCCC
Confidence            99999999999999998765  66888999999999999999999999999999988888999999999888765  577


Q ss_pred             chhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhc
Q 024145          161 PAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLAS  240 (272)
Q Consensus       161 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  240 (272)
                      ..|++||+|+++|+++++.|++++ |+||+|+||+++|++.+.   ..+.....+....+. +++.+|+|+|++++||++
T Consensus       173 ~~Y~~sK~a~~~~~~~la~e~~~~-i~v~~v~PG~v~t~~~~~---~~~~~~~~~~~~~~~-~r~~~~~dva~~~~~l~s  247 (267)
T 3gdg_A          173 TSYNVAKAGCIHMARSLANEWRDF-ARVNSISPGYIDTGLSDF---VPKETQQLWHSMIPM-GRDGLAKELKGAYVYFAS  247 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTT-CEEEEEEECCEECSCGGG---SCHHHHHHHHTTSTT-SSCEETHHHHHHHHHHHS
T ss_pred             CcchHHHHHHHHHHHHHHHHhccC-cEEEEEECCccccchhhh---CCHHHHHHHHhcCCC-CCCcCHHHHHhHhheeec
Confidence            899999999999999999999887 999999999999999873   233334444444454 899999999999999999


Q ss_pred             CCCCCccccEEEecCceee
Q 024145          241 DESSYVSGQNLVVDGGFSV  259 (272)
Q Consensus       241 ~~~~~~~G~~i~~dgG~~~  259 (272)
                      +++.+++|++|.+|||+++
T Consensus       248 ~~~~~itG~~i~vdgG~~~  266 (267)
T 3gdg_A          248 DASTYTTGADLLIDGGYTT  266 (267)
T ss_dssp             TTCTTCCSCEEEESTTGGG
T ss_pred             CccccccCCEEEECCceec
Confidence            9999999999999999865

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=100.00  E-value=7.5e-48  Score=325.18  Aligned_cols=243  Identities=35%  Similarity=0.459  Sum_probs=214.8

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   91 (272)
                      ++++|++|||||++|||++++++|+++|++|++++|+++..++..++++.++.++.+|++|+++++++++++.++++++|
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD   81 (254)
T 1hdc_A            2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVD   81 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            47899999999999999999999999999999999998888777777766789999999999999999999999999999


Q ss_pred             EEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHHH
Q 024145           92 IMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGIL  171 (272)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~  171 (272)
                      +||||||....  .++.+.+.++|++.+++|+.+++.+++.++|+|.+++.|+||++||..+..+.++...|++||++++
T Consensus        82 ~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~  159 (254)
T 1hdc_A           82 GLVNNAGISTG--MFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVR  159 (254)
T ss_dssp             EEEECCCCCCC--SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred             EEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCchhHHHHHHHHH
Confidence            99999998754  5678899999999999999999999999999998877899999999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCC-ChHhHHHHHHHHhcCCCCCccccE
Q 024145          172 GLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFL-KTDGIANAALYLASDESSYVSGQN  250 (272)
Q Consensus       172 ~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~dva~~~~~l~s~~~~~~~G~~  250 (272)
                      .|+++++.|++++||++|+|+||+++|++.....  .+.. +......+. +++. +|+|+|++++||+++++.+++|++
T Consensus       160 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~~~~-~~~~~~~p~-~~~~~~~~dvA~~v~~l~s~~~~~~tG~~  235 (254)
T 1hdc_A          160 GLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETG--IRQG-EGNYPNTPM-GRVGNEPGEIAGAVVKLLSDTSSYVTGAE  235 (254)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHT--CCCS-TTSCTTSTT-SSCB-CHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHhhhcCeEEEEEecccCcCccccccc--hhHH-HHHHhcCCC-CCCCCCHHHHHHHHHHHhCchhcCCCCCE
Confidence            9999999999999999999999999999864210  0000 011111233 6788 999999999999999889999999


Q ss_pred             EEecCceeec
Q 024145          251 LVVDGGFSVV  260 (272)
Q Consensus       251 i~~dgG~~~~  260 (272)
                      |.+|||....
T Consensus       236 ~~vdgG~~~~  245 (254)
T 1hdc_A          236 LAVDGGWTTG  245 (254)
T ss_dssp             EEESTTTTTS
T ss_pred             EEECCCcccc
Confidence            9999998764

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=4.6e-47  Score=320.69  Aligned_cols=245  Identities=31%  Similarity=0.485  Sum_probs=212.4

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGK   89 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (272)
                      |.++++|++|||||++|||++++++|+++|++|++++|+++. ++..+++. . .++.+|++|+++++++++++.+++++
T Consensus         1 M~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~-~-~~~~~D~~~~~~~~~~~~~~~~~~g~   77 (256)
T 2d1y_A            1 MGLFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIG-G-AFFQVDLEDERERVRFVEEAAYALGR   77 (256)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHT-C-EEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhh-C-CEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence            346789999999999999999999999999999999999877 66666665 4 88999999999999999999999999


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHH
Q 024145           90 LDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYG  169 (272)
Q Consensus        90 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a  169 (272)
                      +|+||||||....  .++.+.+.++|++.+++|+.+++.++++++|+|.+++.|+||++||..+..+.++...|++||++
T Consensus        78 iD~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  155 (256)
T 2d1y_A           78 VDVLVNNAAIAAP--GSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGG  155 (256)
T ss_dssp             CCEEEECCCCCCC--BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHHHH
T ss_pred             CCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCChhHHHHHHH
Confidence            9999999998754  67788999999999999999999999999999988788999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCC---CChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCc
Q 024145          170 ILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGG---VDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYV  246 (272)
Q Consensus       170 ~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  246 (272)
                      ++.|+++++.|++++||++|+|+||+++|++.....   ...+...+.+....+. +++.+|+|+|++++||+++++.++
T Consensus       156 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dvA~~~~~l~s~~~~~~  234 (256)
T 2d1y_A          156 LVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHAL-RRLGKPEEVAEAVLFLASEKASFI  234 (256)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTT-SSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHhhcCeEEEEEeeCCccCchhhhccccccCCHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCchhcCC
Confidence            999999999999999999999999999999854210   0011111122222334 789999999999999999988999


Q ss_pred             cccEEEecCceeec
Q 024145          247 SGQNLVVDGGFSVV  260 (272)
Q Consensus       247 ~G~~i~~dgG~~~~  260 (272)
                      +|++|.+|||..+.
T Consensus       235 ~G~~~~v~gG~~~~  248 (256)
T 2d1y_A          235 TGAILPVDGGMTAS  248 (256)
T ss_dssp             CSCEEEESTTGGGB
T ss_pred             CCCEEEECCCcccc
Confidence            99999999998654

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=100.00  E-value=1.9e-47  Score=326.64  Aligned_cols=245  Identities=27%  Similarity=0.402  Sum_probs=203.7

Q ss_pred             ccCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecC------------cchHHHHHH---HhCCceEEEEecCCC
Q 024145            8 APFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQ------------DKLGEDLAD---KLGQDVCYIHCDISN   72 (272)
Q Consensus         8 ~~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~------------~~~~~~~~~---~~~~~~~~~~~D~~~   72 (272)
                      .+..+++||++|||||++|||++++++|+++|++|++++|+            .+..++..+   ..+.++.++.+|++|
T Consensus         6 ~~~~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   85 (278)
T 3sx2_A            6 SSEGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRD   85 (278)
T ss_dssp             ---CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTC
T ss_pred             CCCCCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCC
Confidence            34567899999999999999999999999999999999987            344443333   336789999999999


Q ss_pred             HHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCC-CceEEEEecc
Q 024145           73 EDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ-KGCILFTASA  151 (272)
Q Consensus        73 ~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~  151 (272)
                      +++++++++++.+++|++|+||||||+...  .    .+.++|++++++|+.+++.++++++|+|.+++ .|+||++||.
T Consensus        86 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~--~----~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~  159 (278)
T 3sx2_A           86 RESLSAALQAGLDELGRLDIVVANAGIAPM--S----AGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSS  159 (278)
T ss_dssp             HHHHHHHHHHHHHHHCCCCEEEECCCCCCC--S----STHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCG
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCCCC--C----CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccH
Confidence            999999999999999999999999998643  1    15899999999999999999999999998754 7999999999


Q ss_pred             cccccC----CCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhh-------cCC
Q 024145          152 CTEIAG----LGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQ-------MGN  220 (272)
Q Consensus       152 ~~~~~~----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~-------~~~  220 (272)
                      .+..+.    ++...|++||+|+++|+++++.|++++||+||+|+||+++|++...... .+........       ...
T Consensus       160 ~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  238 (278)
T 3sx2_A          160 AGLAGVGSADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFT-REWLAKMAAATDTPGAMGNA  238 (278)
T ss_dssp             GGTSCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHH-HHHHHHHHHHCC--CTTSCS
T ss_pred             HhcCCCccCCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhH-HHHHhhccchhhhhhhhhhh
Confidence            988776    6667899999999999999999999999999999999999999763100 0111111100       011


Q ss_pred             CCCCCCChHhHHHHHHHHhcCCCCCccccEEEecCceee
Q 024145          221 LKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSV  259 (272)
Q Consensus       221 ~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~  259 (272)
                      .++++.+|||+|++++||+++++++++|++|.+|||+..
T Consensus       239 ~p~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~~~  277 (278)
T 3sx2_A          239 MPVEVLAPEDVANAVAWLVSDQARYITGVTLPVDAGFLN  277 (278)
T ss_dssp             SSCSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTT
T ss_pred             cCcCcCCHHHHHHHHHHHhCcccccccCCEEeECCCccc
Confidence            126788999999999999999999999999999999754

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=100.00  E-value=3.1e-47  Score=321.71  Aligned_cols=242  Identities=27%  Similarity=0.425  Sum_probs=211.3

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   91 (272)
                      +|++|||||++|||++++++|+++|++|++++|+++..+++.+++   +.++.++.+|++|+++++++++++.++++++|
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   81 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD   81 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            689999999999999999999999999999999987776665554   56789999999999999999999999999999


Q ss_pred             EEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCC-CceEEEEecccccccCCCCchhhhhHHHH
Q 024145           92 IMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ-KGCILFTASACTEIAGLGSPAYTISKYGI  170 (272)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~Y~~sK~a~  170 (272)
                      +||||||....  .++.+.+.++|++.+++|+.+++.++++++|+|.+++ .|+||++||..+..+.+....|++||+++
T Consensus        82 ~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~  159 (256)
T 1geg_A           82 VIVNNAGVAPS--TPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAV  159 (256)
T ss_dssp             EEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHH
T ss_pred             EEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCchhHHHHHHHH
Confidence            99999998654  5778899999999999999999999999999998766 79999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCC--------CChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCC
Q 024145          171 LGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGG--------VDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDE  242 (272)
Q Consensus       171 ~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  242 (272)
                      ++|+++++.|++++||+||+|+||+++|++.....        ...+...+.+....++ +++.+|+|+|++++||++++
T Consensus       160 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~p~dvA~~v~~l~s~~  238 (256)
T 1geg_A          160 RGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITL-GRLSEPEDVAACVSYLASPD  238 (256)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTT-CSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCcc
Confidence            99999999999999999999999999999864210        0011111222223344 78999999999999999998


Q ss_pred             CCCccccEEEecCceee
Q 024145          243 SSYVSGQNLVVDGGFSV  259 (272)
Q Consensus       243 ~~~~~G~~i~~dgG~~~  259 (272)
                      +.+++|++|.+|||..+
T Consensus       239 ~~~~tG~~i~vdGG~~~  255 (256)
T 1geg_A          239 SDYMTGQSLLIDGGMVF  255 (256)
T ss_dssp             GTTCCSCEEEESSSSSC
T ss_pred             ccCCCCCEEEeCCCccC
Confidence            89999999999999764

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=100.00  E-value=7.2e-47  Score=320.10  Aligned_cols=249  Identities=28%  Similarity=0.403  Sum_probs=214.6

Q ss_pred             cCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHH
Q 024145            9 PFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVS   85 (272)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (272)
                      +..+++||++|||||++|||++++++|+++|++|++++|+++..++..+++   +.++.++.+|++|.++++++++++.+
T Consensus         8 ~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   87 (260)
T 2zat_A            8 RRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVN   87 (260)
T ss_dssp             --CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            345689999999999999999999999999999999999987766655544   55788999999999999999999999


Q ss_pred             HhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhh
Q 024145           86 KFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTI  165 (272)
Q Consensus        86 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~  165 (272)
                      +++++|+||||||.... ..++.+.+.++|++++++|+.+++.++++++|+|.+++.|+||++||..+..+.++...|++
T Consensus        88 ~~g~iD~lv~~Ag~~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  166 (260)
T 2zat_A           88 LHGGVDILVSNAAVNPF-FGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNV  166 (260)
T ss_dssp             HHSCCCEEEECCCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHH
T ss_pred             HcCCCCEEEECCCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCCCCchhHHH
Confidence            99999999999997542 15677889999999999999999999999999998878899999999999998899999999


Q ss_pred             hHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCC
Q 024145          166 SKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSY  245 (272)
Q Consensus       166 sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  245 (272)
                      ||++++.|+++++.|++++||++|+|+||+++|++....... +.....+....+. +++.+|+|+|++++||+++++.+
T Consensus       167 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~dva~~v~~l~s~~~~~  244 (260)
T 2zat_A          167 SKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMD-KARKEYMKESLRI-RRLGNPEDCAGIVSFLCSEDASY  244 (260)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHSS-HHHHHHHHHHHTC-SSCBCGGGGHHHHHHHTSGGGTT
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhcccC-hHHHHHHHhcCCC-CCCCCHHHHHHHHHHHcCcccCC
Confidence            999999999999999999999999999999999986421111 1111222222333 78999999999999999998899


Q ss_pred             ccccEEEecCceeec
Q 024145          246 VSGQNLVVDGGFSVV  260 (272)
Q Consensus       246 ~~G~~i~~dgG~~~~  260 (272)
                      ++|++|.+|||....
T Consensus       245 ~tG~~~~vdgG~~~s  259 (260)
T 2zat_A          245 ITGETVVVGGGTASR  259 (260)
T ss_dssp             CCSCEEEESTTCCCC
T ss_pred             ccCCEEEECCCcccc
Confidence            999999999997653

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=100.00  E-value=7.2e-47  Score=320.62  Aligned_cols=247  Identities=28%  Similarity=0.472  Sum_probs=216.3

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGK   89 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (272)
                      +.++++|++|||||++|||++++++|+++|++|++++|+++..++..+++..++.++.+|++|+++++++++++.+++|+
T Consensus         7 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~   86 (263)
T 3ak4_A            7 IFDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGG   86 (263)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred             CcCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence            56689999999999999999999999999999999999988777777766667889999999999999999999999999


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCC-CceEEEEecccccccCCCCchhhhhHH
Q 024145           90 LDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ-KGCILFTASACTEIAGLGSPAYTISKY  168 (272)
Q Consensus        90 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~Y~~sK~  168 (272)
                      +|+||||||....  .++.+.+.++|++.+++|+.+++.+++++.|+|.+++ .|+||++||..+..+.+....|++||+
T Consensus        87 iD~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  164 (263)
T 3ak4_A           87 FDLLCANAGVSTM--RPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKF  164 (263)
T ss_dssp             CCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCEEEECCCcCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCCCCchhHHHHHH
Confidence            9999999998754  6778899999999999999999999999999998766 799999999999988899999999999


Q ss_pred             HHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCC--------CChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhc
Q 024145          169 GILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGG--------VDPALIESSMSQMGNLKGEFLKTDGIANAALYLAS  240 (272)
Q Consensus       169 a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  240 (272)
                      +++.|+++++.|++++||++|+|+||+++|++.....        ...+.....+....+. +++.+|+|+|++++||++
T Consensus       165 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~dvA~~v~~l~s  243 (263)
T 3ak4_A          165 AVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPL-GRIEEPEDVADVVVFLAS  243 (263)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTCTT-CSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhC
Confidence            9999999999999999999999999999999864210        0001111222233344 789999999999999999


Q ss_pred             CCCCCccccEEEecCceee
Q 024145          241 DESSYVSGQNLVVDGGFSV  259 (272)
Q Consensus       241 ~~~~~~~G~~i~~dgG~~~  259 (272)
                      +++++++|++|.+|||..+
T Consensus       244 ~~~~~~tG~~~~vdgG~~~  262 (263)
T 3ak4_A          244 DAARFMTGQGINVTGGVRM  262 (263)
T ss_dssp             GGGTTCCSCEEEESSSSSC
T ss_pred             ccccCCCCCEEEECcCEeC
Confidence            9889999999999999753

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=100.00  E-value=2.5e-47  Score=321.50  Aligned_cols=245  Identities=29%  Similarity=0.451  Sum_probs=182.1

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (272)
                      .+++++|++|||||++|||++++++|+++|++|++++|+.+..+++.+++   +.++.++.+|++|+++++++++++.++
T Consensus         4 ~~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (253)
T 3qiv_A            4 SMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAE   83 (253)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            45689999999999999999999999999999999999988877776655   568999999999999999999999999


Q ss_pred             hCCccEEEeCCCCCCC-CCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhh
Q 024145           87 FGKLDIMYNNAGILDR-SFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTI  165 (272)
Q Consensus        87 ~g~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~  165 (272)
                      ++++|+||||||+... ...++.+.+.++|++.+++|+.+++.++++++|+|.+++.|+||++||..+.   +....|++
T Consensus        84 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~---~~~~~Y~a  160 (253)
T 3qiv_A           84 FGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAW---LYSNYYGL  160 (253)
T ss_dssp             HSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC--------------C
T ss_pred             cCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCcccc---CCCchhHH
Confidence            9999999999998432 2256778899999999999999999999999999998889999999998876   45678999


Q ss_pred             hHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCC
Q 024145          166 SKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSY  245 (272)
Q Consensus       166 sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  245 (272)
                      ||+|+++|+++++.|++++||++++|+||+++|++.+..  .++...+......+. +++.+|+|+|++++||++++..+
T Consensus       161 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~s~~~~~  237 (253)
T 3qiv_A          161 AKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTT--TPKEMVDDIVKGLPL-SRMGTPDDLVGMCLFLLSDEASW  237 (253)
T ss_dssp             CHHHHHHHHHHHHHHTTTTTEEEEEEEC----------------------------------CCHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhc--CcHHHHHHHhccCCC-CCCCCHHHHHHHHHHHcCccccC
Confidence            999999999999999999999999999999999987642  122222222223333 78899999999999999999999


Q ss_pred             ccccEEEecCceeec
Q 024145          246 VSGQNLVVDGGFSVV  260 (272)
Q Consensus       246 ~~G~~i~~dgG~~~~  260 (272)
                      ++|++|.+|||..+.
T Consensus       238 ~tG~~~~vdgG~~~~  252 (253)
T 3qiv_A          238 ITGQIFNVDGGQIIR  252 (253)
T ss_dssp             CCSCEEEC-------
T ss_pred             CCCCEEEECCCeecC
Confidence            999999999998764

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=100.00  E-value=7.5e-47  Score=322.96  Aligned_cols=248  Identities=25%  Similarity=0.369  Sum_probs=215.6

Q ss_pred             ccCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHH
Q 024145            8 APFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAV   84 (272)
Q Consensus         8 ~~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~   84 (272)
                      .+|.++++|++|||||++|||++++++|+++|++|++++|+++..++..+++   +.++.++.+|++|+++++++++++.
T Consensus        15 ~~m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   94 (277)
T 2rhc_B           15 SHMATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVV   94 (277)
T ss_dssp             TTTCCTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHH
Confidence            3455789999999999999999999999999999999999988776665554   5678999999999999999999999


Q ss_pred             HHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHh--hcCCCCceEEEEecccccccCCCCch
Q 024145           85 SKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARV--MVPQQKGCILFTASACTEIAGLGSPA  162 (272)
Q Consensus        85 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~g~iv~iss~~~~~~~~~~~~  162 (272)
                      ++++++|+||||||....  .++.+.+.++|++.+++|+.+++.++++++|.  |.+++.|+||++||..+..+.+....
T Consensus        95 ~~~g~iD~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~  172 (277)
T 2rhc_B           95 ERYGPVDVLVNNAGRPGG--GATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAP  172 (277)
T ss_dssp             HHTCSCSEEEECCCCCCC--SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCCTTCHH
T ss_pred             HHhCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCCCCCcc
Confidence            999999999999998754  67788999999999999999999999999999  87767799999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCC---C-----hhHHHHHHhhcCCCCCCCCChHhHHHH
Q 024145          163 YTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGV---D-----PALIESSMSQMGNLKGEFLKTDGIANA  234 (272)
Q Consensus       163 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~---~-----~~~~~~~~~~~~~~~~~~~~~~dva~~  234 (272)
                      |++||++++.|+++++.|++++||++|+|+||+++|++......   .     .+...+.+....+. +++.+|+|+|++
T Consensus       173 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~~~dvA~~  251 (277)
T 2rhc_B          173 YSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPI-GRYVQPSEVAEM  251 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHSTT-SSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHHhcCCC-CCCcCHHHHHHH
Confidence            99999999999999999999999999999999999998642100   0     01111222222344 789999999999


Q ss_pred             HHHHhcCCCCCccccEEEecCcee
Q 024145          235 ALYLASDESSYVSGQNLVVDGGFS  258 (272)
Q Consensus       235 ~~~l~s~~~~~~~G~~i~~dgG~~  258 (272)
                      ++||+++++.+++|++|.+|||..
T Consensus       252 v~~l~s~~~~~~tG~~~~vdGG~~  275 (277)
T 2rhc_B          252 VAYLIGPGAAAVTAQALNVCGGLG  275 (277)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTCC
T ss_pred             HHHHhCchhcCCCCcEEEECCCcc
Confidence            999999988999999999999964

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=6.8e-47  Score=319.29  Aligned_cols=240  Identities=22%  Similarity=0.240  Sum_probs=209.3

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcC--CeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Q 024145           15 GKVAIITGGASGIGAMAVELFHENG--AKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDI   92 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   92 (272)
                      ||++|||||++|||++++++|+++|  ++|++++|+++..+++.++++.++.++.+|++|.++++++++++.+++|++|+
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   81 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDS   81 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCccE
Confidence            6899999999999999999999985  78999999998888888888888999999999999999999999999999999


Q ss_pred             EEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHHHH
Q 024145           93 MYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILG  172 (272)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~  172 (272)
                      ||||||...+ ..++.+.+.++|++.+++|+.+++.++++++|+|.+++ |+||++||..+..+.++...|++||+|+++
T Consensus        82 lvnnAg~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~a~~~  159 (254)
T 3kzv_A           82 LVANAGVLEP-VQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDACNMYFSSWGAYGSSKAALNH  159 (254)
T ss_dssp             EEEECCCCCC-CTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSCCCCSSCCSHHHHHHHHHHHH
T ss_pred             EEECCcccCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCchhccCCCCcchHHHHHHHHHH
Confidence            9999998643 26788999999999999999999999999999998754 999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCC------hhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCC-CCC
Q 024145          173 LVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVD------PALIESSMSQMGNLKGEFLKTDGIANAALYLASDE-SSY  245 (272)
Q Consensus       173 ~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~-~~~  245 (272)
                      |+++++.|+  +||+||+|+||+++|++.......      .++..+.+....+. +++.+|||+|++++||+++. +++
T Consensus       160 ~~~~la~e~--~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~r~~~p~dva~~v~~L~s~~~~~~  236 (254)
T 3kzv_A          160 FAMTLANEE--RQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKEN-NQLLDSSVPATVYAKLALHGIPDG  236 (254)
T ss_dssp             HHHHHHHHC--TTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHTT-C----CHHHHHHHHHHHHHCCCGG
T ss_pred             HHHHHHhhc--cCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHHhc-CCcCCcccHHHHHHHHHhhcccCC
Confidence            999999998  689999999999999998653211      12223333334444 89999999999999999998 499


Q ss_pred             ccccEEEecCceee
Q 024145          246 VSGQNLVVDGGFSV  259 (272)
Q Consensus       246 ~~G~~i~~dgG~~~  259 (272)
                      ++|++|.+|||...
T Consensus       237 itG~~i~vdg~~~~  250 (254)
T 3kzv_A          237 VNGQYLSYNDPALA  250 (254)
T ss_dssp             GTTCEEETTCGGGG
T ss_pred             CCccEEEecCcccc
Confidence            99999999999865

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=100.00  E-value=8.9e-47  Score=320.07  Aligned_cols=247  Identities=23%  Similarity=0.336  Sum_probs=207.1

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchH-HHHHHH---hCCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLG-EDLADK---LGQDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~-~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      ++.+|++|||||++|||++++++|+++|++|++++|+.... +.+.+.   .+.++.++.+|++|+++++++++++.+++
T Consensus         4 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   83 (264)
T 3i4f_A            4 GRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHF   83 (264)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             ccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            34679999999999999999999999999999997766543 333332   24579999999999999999999999999


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecc-cc-cccCCCCchhhh
Q 024145           88 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASA-CT-EIAGLGSPAYTI  165 (272)
Q Consensus        88 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~-~~-~~~~~~~~~Y~~  165 (272)
                      +++|+||||||.......++.+.+.++|++.+++|+.+++.++++++|+|.+++.|+||++||. .+ ..+.++...|++
T Consensus        84 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~Y~a  163 (264)
T 3i4f_A           84 GKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYRSAFAA  163 (264)
T ss_dssp             SCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCCCCTTCHHHHH
T ss_pred             CCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccCCCCCCchhHH
Confidence            9999999999953333367888999999999999999999999999999988888999999998 44 556778889999


Q ss_pred             hHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCC
Q 024145          166 SKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSY  245 (272)
Q Consensus       166 sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  245 (272)
                      ||+|+++|+++++.|++++||+||+|+||+++|++...   ..+..........++ +++.+|||+|++++||+++.+.+
T Consensus       164 sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~---~~~~~~~~~~~~~p~-~r~~~~~dva~~v~~l~s~~~~~  239 (264)
T 3i4f_A          164 AKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEA---TIQEARQLKEHNTPI-GRSGTGEDIARTISFLCEDDSDM  239 (264)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSC---CHHHHHHC---------CCCCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchh---ccHHHHHHHhhcCCC-CCCcCHHHHHHHHHHHcCcccCC
Confidence            99999999999999999999999999999999999873   333333333333444 88999999999999999999999


Q ss_pred             ccccEEEecCceeeccC
Q 024145          246 VSGQNLVVDGGFSVVNP  262 (272)
Q Consensus       246 ~~G~~i~~dgG~~~~~~  262 (272)
                      ++|++|.+|||+....+
T Consensus       240 itG~~i~vdGG~~~~~~  256 (264)
T 3i4f_A          240 ITGTIIEVTGAVDVIHR  256 (264)
T ss_dssp             CCSCEEEESCSCCCCC-
T ss_pred             CCCcEEEEcCceeeccC
Confidence            99999999999988644

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=100.00  E-value=1.6e-46  Score=322.63  Aligned_cols=246  Identities=26%  Similarity=0.388  Sum_probs=206.5

Q ss_pred             CccCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCc-chHHHHHHHh----CCceEEEEecCCC----HHHHH
Q 024145            7 AAPFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQD-KLGEDLADKL----GQDVCYIHCDISN----EDEVI   77 (272)
Q Consensus         7 ~~~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~-~~~~~~~~~~----~~~~~~~~~D~~~----~~~~~   77 (272)
                      ..+..+++||++|||||++|||++++++|+++|++|++++|+. +..+++.+++    +.++.++.+|++|    +++++
T Consensus        15 ~~~~~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~   94 (288)
T 2x9g_A           15 VPRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCE   94 (288)
T ss_dssp             -------CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHH
T ss_pred             CCCCcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHH
Confidence            3456778999999999999999999999999999999999998 6666555543    5679999999999    99999


Q ss_pred             HHHHHHHHHhCCccEEEeCCCCCCCCCCCC-----CC-----CCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCC------
Q 024145           78 NLVDTAVSKFGKLDIMYNNAGILDRSFGSI-----LD-----TPKSDLERLINVNTIGGFLGAKHAARVMVPQQ------  141 (272)
Q Consensus        78 ~~~~~~~~~~g~id~lv~~ag~~~~~~~~~-----~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~------  141 (272)
                      ++++++.++++++|+||||||+...  .++     .+     .+.++|++.+++|+.+++.+++.++|+|.+++      
T Consensus        95 ~~~~~~~~~~g~iD~lvnnAG~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~  172 (288)
T 2x9g_A           95 EIINSCFRAFGRCDVLVNNASAFYP--TPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSS  172 (288)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCC--CCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CC
T ss_pred             HHHHHHHHhcCCCCEEEECCCCCCC--CccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCC
Confidence            9999999999999999999998754  445     56     78899999999999999999999999998766      


Q ss_pred             CceEEEEecccccccCCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCC
Q 024145          142 KGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNL  221 (272)
Q Consensus       142 ~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~  221 (272)
                      .|+||++||..+..+.++...|++||+|+++|+++++.|++++||+||+|+||+++|++ .   ..++..... ....++
T Consensus       173 ~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~---~~~~~~~~~-~~~~p~  247 (288)
T 2x9g_A          173 NLSIVNLCDAMVDQPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-A---MGEEEKDKW-RRKVPL  247 (288)
T ss_dssp             CEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-T---SCHHHHHHH-HHTCTT
T ss_pred             CeEEEEEecccccCCCCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-c---cChHHHHHH-HhhCCC
Confidence            78999999999999999999999999999999999999999999999999999999999 4   123322222 222344


Q ss_pred             CCCC-CChHhHHHHHHHHhcCCCCCccccEEEecCceeec
Q 024145          222 KGEF-LKTDGIANAALYLASDESSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       222 ~~~~-~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~  260 (272)
                       +++ .+|||+|++++||+++.+.+++|++|.+|||..+.
T Consensus       248 -~r~~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~~  286 (288)
T 2x9g_A          248 -GRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSLV  286 (288)
T ss_dssp             -TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             -CCCCCCHHHHHHHHHHHhCccccCccCCEEEECcchhhh
Confidence             778 89999999999999999999999999999997653

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=6.3e-47  Score=324.73  Aligned_cols=237  Identities=24%  Similarity=0.301  Sum_probs=209.6

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcch-------HHHHHH---HhCCceEEEEecCCCHHHHHHH
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKL-------GEDLAD---KLGQDVCYIHCDISNEDEVINL   79 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~-------~~~~~~---~~~~~~~~~~~D~~~~~~~~~~   79 (272)
                      .+++++|++|||||++|||++++++|+++|++|++++|+.+.       .++..+   ..+.++.++++|++|+++++++
T Consensus         4 ~m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   83 (285)
T 3sc4_A            4 SMSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAA   83 (285)
T ss_dssp             --CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            356899999999999999999999999999999999998763       333333   3367899999999999999999


Q ss_pred             HHHHHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccC-C
Q 024145           80 VDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAG-L  158 (272)
Q Consensus        80 ~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~-~  158 (272)
                      ++++.++++++|+||||||+...  .++.+.+.++|++++++|+.+++.++++++|+|.+++.|+||++||..+..+. +
T Consensus        84 ~~~~~~~~g~id~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~  161 (285)
T 3sc4_A           84 VAKTVEQFGGIDICVNNASAINL--GSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWL  161 (285)
T ss_dssp             HHHHHHHHSCCSEEEECCCCCCC--CCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGGGS
T ss_pred             HHHHHHHcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCCCC
Confidence            99999999999999999998765  78889999999999999999999999999999998888999999999988875 7


Q ss_pred             CCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCC-cccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHH
Q 024145          159 GSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPY-GLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALY  237 (272)
Q Consensus       159 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  237 (272)
                      +...|++||+|+++|+++++.|++++||+||+|+|| .++|++..          .......++ +++.+|||+|++++|
T Consensus       162 ~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~~~~----------~~~~~~~~~-~r~~~pedvA~~~~~  230 (285)
T 3sc4_A          162 RPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAAVQ----------NLLGGDEAM-ARSRKPEVYADAAYV  230 (285)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCHHHH----------HHHTSCCCC-TTCBCTHHHHHHHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccHHHH----------hhccccccc-cCCCCHHHHHHHHHH
Confidence            889999999999999999999999999999999999 68888754          112222233 788999999999999


Q ss_pred             HhcCCCCCccccEEEecCceeec
Q 024145          238 LASDESSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       238 l~s~~~~~~~G~~i~~dgG~~~~  260 (272)
                      |+++.+ +++|+++.+|||....
T Consensus       231 l~s~~~-~~tG~~i~~dgg~~~~  252 (285)
T 3sc4_A          231 VLNKPS-SYTGNTLLCEDVLLES  252 (285)
T ss_dssp             HHTSCT-TCCSCEEEHHHHHHHH
T ss_pred             HhCCcc-cccceEEEEcCchhcc
Confidence            999988 9999999999998763

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=4.5e-47  Score=324.32  Aligned_cols=254  Identities=31%  Similarity=0.387  Sum_probs=203.5

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh------CCceEEEEecCCCHHHHHHHHHHHH
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL------GQDVCYIHCDISNEDEVINLVDTAV   84 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~   84 (272)
                      .++++|++|||||++|||++++++|+++|++|++++|+++..++..+++      +.++.++.+|++|+++++++++++.
T Consensus         2 ~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   81 (278)
T 1spx_A            2 TRFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTL   81 (278)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999988777766655      2468899999999999999999999


Q ss_pred             HHhCCccEEEeCCCCCCCCCCCCCCC----CHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccc-cccCCC
Q 024145           85 SKFGKLDIMYNNAGILDRSFGSILDT----PKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACT-EIAGLG  159 (272)
Q Consensus        85 ~~~g~id~lv~~ag~~~~~~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~-~~~~~~  159 (272)
                      +++|++|+||||||....  .++.+.    +.++|++.+++|+.+++.++++++|+|.+++ |+||++||..+ ..+.++
T Consensus        82 ~~~g~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~  158 (278)
T 1spx_A           82 GKFGKLDILVNNAGAAIP--DSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHATPD  158 (278)
T ss_dssp             HHHSCCCEEEECCC---------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCCTT
T ss_pred             HHcCCCCEEEECCCCCCC--cccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEecccccccCCCC
Confidence            999999999999998654  556667    8999999999999999999999999997655 99999999998 888888


Q ss_pred             CchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHH------HHHHhhcCCCCCCCCChHhHHH
Q 024145          160 SPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALI------ESSMSQMGNLKGEFLKTDGIAN  233 (272)
Q Consensus       160 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~dva~  233 (272)
                      ...|++||++++.++++++.|++++||++|+|+||+++|++...........      ........+. +++.+|+|+|+
T Consensus       159 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~dvA~  237 (278)
T 1spx_A          159 FPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPA-GVMGQPQDIAE  237 (278)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTT-SSCBCHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhcCCC-cCCCCHHHHHH
Confidence            9999999999999999999999999999999999999999865321111111      1122222344 78999999999


Q ss_pred             HHHHHhcCCCCC-ccccEEEecCceeeccCcccccc
Q 024145          234 AALYLASDESSY-VSGQNLVVDGGFSVVNPTVMRAY  268 (272)
Q Consensus       234 ~~~~l~s~~~~~-~~G~~i~~dgG~~~~~~~~~~~~  268 (272)
                      +++||++++..+ ++|++|.+|||..+....+++..
T Consensus       238 ~v~~l~s~~~~~~~tG~~~~vdgG~~~~~~~~~~~~  273 (278)
T 1spx_A          238 VIAFLADRKTSSYIIGHQLVVDGGSSLIMGLHCQDF  273 (278)
T ss_dssp             HHHHHHCHHHHTTCCSCEEEESTTGGGC--------
T ss_pred             HHHHHcCccccCcccCcEEEECCCcccccCcccccH
Confidence            999999987776 99999999999988766665544

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=100.00  E-value=1.6e-46  Score=319.39  Aligned_cols=257  Identities=20%  Similarity=0.234  Sum_probs=211.3

Q ss_pred             CCCccCCCCCCcEEEEeCCC--ChHHHHHHHHHHHcCCeEEEeecCcchHHHHH---HHhCCceEEEEecCCCHHHHHHH
Q 024145            5 SSAAPFKRLEGKVAIITGGA--SGIGAMAVELFHENGAKVVIADVQDKLGEDLA---DKLGQDVCYIHCDISNEDEVINL   79 (272)
Q Consensus         5 ~~~~~~~~l~~k~vlItGas--~giG~aia~~la~~G~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~D~~~~~~~~~~   79 (272)
                      .++.+..++++|++|||||+  +|||++++++|+++|++|++++|+....+.+.   ++ ...+.++.+|++|+++++++
T Consensus         4 ~~~~~~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~   82 (271)
T 3ek2_A            4 HHHHHMGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAE-FGSELVFPCDVADDAQIDAL   82 (271)
T ss_dssp             -----CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHH-TTCCCEEECCTTCHHHHHHH
T ss_pred             CCCCCccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHH-cCCcEEEECCCCCHHHHHHH
Confidence            33456778899999999999  99999999999999999999999854433322   23 34588999999999999999


Q ss_pred             HHHHHHHhCCccEEEeCCCCCCCC--CCCCCC-CCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccccccc
Q 024145           80 VDTAVSKFGKLDIMYNNAGILDRS--FGSILD-TPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIA  156 (272)
Q Consensus        80 ~~~~~~~~g~id~lv~~ag~~~~~--~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~  156 (272)
                      ++++.++++++|+||||||+....  ..++.+ .+.++|++.+++|+.+++.++++++|+|.+  .|+||++||..+..+
T Consensus        83 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~  160 (271)
T 3ek2_A           83 FASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSD--DASLLTLSYLGAERA  160 (271)
T ss_dssp             HHHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEE--EEEEEEEECGGGTSB
T ss_pred             HHHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhcc--CceEEEEeccccccC
Confidence            999999999999999999986531  134555 899999999999999999999999999974  689999999999999


Q ss_pred             CCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHH
Q 024145          157 GLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAAL  236 (272)
Q Consensus       157 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  236 (272)
                      .++...|++||+|+++|+++++.|++++||+||+|+||+++|++..... ..+...+......+. +++.+|||+|++++
T Consensus       161 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~~~-~~~~~pedva~~i~  238 (271)
T 3ek2_A          161 IPNYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIK-SFGKILDFVESNSPL-KRNVTIEQVGNAGA  238 (271)
T ss_dssp             CTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCH-HHHHHHHHHHHHSTT-SSCCCHHHHHHHHH
T ss_pred             CCCccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhccc-chHHHHHHHHhcCCc-CCCCCHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999976321 112333334444455 78999999999999


Q ss_pred             HHhcCCCCCccccEEEecCceeeccCcccc
Q 024145          237 YLASDESSYVSGQNLVVDGGFSVVNPTVMR  266 (272)
Q Consensus       237 ~l~s~~~~~~~G~~i~~dgG~~~~~~~~~~  266 (272)
                      ||+++.+.+++|++|.+|||..+..+...+
T Consensus       239 ~l~s~~~~~~tG~~i~vdgG~~~~~~~~~~  268 (271)
T 3ek2_A          239 FLLSDLASGVTAEVMHVDSGFNAVVGGMAG  268 (271)
T ss_dssp             HHHSGGGTTCCSEEEEESTTGGGBCCCC--
T ss_pred             HHcCcccCCeeeeEEEECCCeeeehhhhhh
Confidence            999999999999999999999998766543

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=100.00  E-value=3.7e-47  Score=320.74  Aligned_cols=244  Identities=32%  Similarity=0.478  Sum_probs=215.3

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   91 (272)
                      +++||++|||||++|||++++++|+++|++|++++|+++..+++.++++.++.++.+|++|+++++++++++.++++++|
T Consensus         3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   82 (253)
T 1hxh_A            3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLN   82 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            57899999999999999999999999999999999998888877777777899999999999999999999999999999


Q ss_pred             EEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHHH
Q 024145           92 IMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGIL  171 (272)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~  171 (272)
                      +||||||....  .++.+.+.++|++.+++|+.+++.+++.++|.|.+++ |+||++||..+..+.++...|++||++++
T Consensus        83 ~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~~sK~a~~  159 (253)
T 1hxh_A           83 VLVNNAGILLP--GDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPIEQYAGYSASKAAVS  159 (253)
T ss_dssp             EEEECCCCCCC--BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCCTTBHHHHHHHHHHH
T ss_pred             EEEECCCCCCC--CCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcCCCCCCccHHHHHHHHH
Confidence            99999998754  6788899999999999999999999999999998876 99999999999999999999999999999


Q ss_pred             HHHHHHHHHhcCC--CcEEEEEeCCcccCCcccCCCCChhHHHHHHhh---cCCCCCCCCChHhHHHHHHHHhcCCCCCc
Q 024145          172 GLVKCLAAELGQY--GIRVNCVSPYGLATGMSMKGGVDPALIESSMSQ---MGNLKGEFLKTDGIANAALYLASDESSYV  246 (272)
Q Consensus       172 ~~~~~la~e~~~~--gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~dva~~~~~l~s~~~~~~  246 (272)
                      .|+++++.|++++  ||++|+|+||+++|++..... ..+.....+..   ..+. +++.+|+|+|++++||+++++.++
T Consensus       160 ~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~p~-~~~~~~~dvA~~~~~l~s~~~~~~  237 (253)
T 1hxh_A          160 ALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASL-PKGVSKEMVLHDPKLNRA-GRAYMPERIAQLVLFLASDESSVM  237 (253)
T ss_dssp             HHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHS-CTTCCHHHHBCBTTTBTT-CCEECHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhcc-chhhhHHHHhhhhccCcc-CCCCCHHHHHHHHHHHcCccccCC
Confidence            9999999999888  999999999999999865211 11111111212   2233 788999999999999999988999


Q ss_pred             cccEEEecCceeec
Q 024145          247 SGQNLVVDGGFSVV  260 (272)
Q Consensus       247 ~G~~i~~dgG~~~~  260 (272)
                      +|++|.+|||....
T Consensus       238 tG~~~~vdgG~~~~  251 (253)
T 1hxh_A          238 SGSELHADNSILGM  251 (253)
T ss_dssp             CSCEEEESSSCTTT
T ss_pred             CCcEEEECCCcccc
Confidence            99999999997653

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=100.00  E-value=5.1e-47  Score=318.88  Aligned_cols=244  Identities=30%  Similarity=0.476  Sum_probs=198.6

Q ss_pred             CCccCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHH
Q 024145            6 SAAPFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVS   85 (272)
Q Consensus         6 ~~~~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (272)
                      ++.+..++++|++|||||++|||++++++|+++|++|++++|+.+..+++.+++..++.++.+|+++.+++++++++   
T Consensus         5 ~~~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~---   81 (249)
T 3f9i_A            5 HHHHMIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISK---   81 (249)
T ss_dssp             ----CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHT---
T ss_pred             CccccccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHh---
Confidence            34556778999999999999999999999999999999999999988888888888899999999999998877654   


Q ss_pred             HhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhh
Q 024145           86 KFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTI  165 (272)
Q Consensus        86 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~  165 (272)
                       .+++|++|||||....  ..+.+.+.++|++.+++|+.+++.++++++++|.+++.|+||++||..+..+.++...|++
T Consensus        82 -~~~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  158 (249)
T 3f9i_A           82 -TSNLDILVCNAGITSD--TLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCA  158 (249)
T ss_dssp             -CSCCSEEEECCC---------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCSCSHHHHH
T ss_pred             -cCCCCEEEECCCCCCC--CccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCCCCCchhHH
Confidence             4789999999998765  5677888899999999999999999999999998888899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCC
Q 024145          166 SKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSY  245 (272)
Q Consensus       166 sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  245 (272)
                      ||+|+++|+++++.|++++||++++|+||+++|++...   ..+..........+. +++.+|||+|++++||+++++.+
T Consensus       159 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~---~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~s~~~~~  234 (249)
T 3f9i_A          159 SKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDK---LNEKQREAIVQKIPL-GTYGIPEDVAYAVAFLASNNASY  234 (249)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC---------CCHHHHHHHHHHCTT-CSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccc---cCHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHcCCccCC
Confidence            99999999999999999999999999999999999874   222222333333444 88999999999999999999999


Q ss_pred             ccccEEEecCceee
Q 024145          246 VSGQNLVVDGGFSV  259 (272)
Q Consensus       246 ~~G~~i~~dgG~~~  259 (272)
                      ++|++|.+|||..+
T Consensus       235 ~tG~~~~vdgG~~~  248 (249)
T 3f9i_A          235 ITGQTLHVNGGMLM  248 (249)
T ss_dssp             CCSCEEEESTTSSC
T ss_pred             ccCcEEEECCCEee
Confidence            99999999999864

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=100.00  E-value=1.9e-46  Score=320.11  Aligned_cols=240  Identities=26%  Similarity=0.346  Sum_probs=203.3

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeec-CcchHHHHHHHh----CCceEEEEecCCCH----HHHHHHHH
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADV-QDKLGEDLADKL----GQDVCYIHCDISNE----DEVINLVD   81 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r-~~~~~~~~~~~~----~~~~~~~~~D~~~~----~~~~~~~~   81 (272)
                      .+++||++|||||++|||++++++|+++|++|++++| +++..+++.+++    +.++.++.+|++|.    ++++++++
T Consensus         7 ~~~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   86 (276)
T 1mxh_A            7 EASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIID   86 (276)
T ss_dssp             ----CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHH
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHH
Confidence            4578999999999999999999999999999999999 777766666554    56799999999999    99999999


Q ss_pred             HHHHHhCCccEEEeCCCCCCCCCCCCCCCCH-----------HHHHHHHHHHhHHHHHHHHHHHHhhcCCCC------ce
Q 024145           82 TAVSKFGKLDIMYNNAGILDRSFGSILDTPK-----------SDLERLINVNTIGGFLGAKHAARVMVPQQK------GC  144 (272)
Q Consensus        82 ~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~------g~  144 (272)
                      ++.++++++|+||||||+...  .++.+.+.           ++|++++++|+.+++.++++++|+|. ++.      |+
T Consensus        87 ~~~~~~g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~~~~~~~g~  163 (276)
T 1mxh_A           87 CSFRAFGRCDVLVNNASAYYP--TPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQG-EGGAWRSRNLS  163 (276)
T ss_dssp             HHHHHHSCCCEEEECCCCCCC--CCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC--------CCCEE
T ss_pred             HHHHhcCCCCEEEECCCCCCC--CCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHh-cCCCCCCCCcE
Confidence            999999999999999998754  56777777           99999999999999999999999997 455      89


Q ss_pred             EEEEecccccccCCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCC
Q 024145          145 ILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGE  224 (272)
Q Consensus       145 iv~iss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (272)
                      ||++||..+..+.++...|++||+++++|+++++.|++++||+||+|+||+++|+ ..   ..++.... +....++ ++
T Consensus       164 iv~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~~---~~~~~~~~-~~~~~p~-~r  237 (276)
T 1mxh_A          164 VVNLCDAMTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-PA---MPQETQEE-YRRKVPL-GQ  237 (276)
T ss_dssp             EEEECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-SS---SCHHHHHH-HHTTCTT-TS
T ss_pred             EEEECchhhcCCCCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-cc---CCHHHHHH-HHhcCCC-CC
Confidence            9999999999999999999999999999999999999999999999999999999 21   22222222 2233344 66


Q ss_pred             -CCChHhHHHHHHHHhcCCCCCccccEEEecCceee
Q 024145          225 -FLKTDGIANAALYLASDESSYVSGQNLVVDGGFSV  259 (272)
Q Consensus       225 -~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~  259 (272)
                       +.+|+|+|++++||++++..+++|++|.+|||..+
T Consensus       238 ~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~  273 (276)
T 1mxh_A          238 SEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLIL  273 (276)
T ss_dssp             CCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCCCHHHHHHHHHHHhCccccCccCcEEEECCchhc
Confidence             89999999999999999889999999999999764

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=100.00  E-value=6.8e-47  Score=320.28  Aligned_cols=243  Identities=24%  Similarity=0.315  Sum_probs=209.5

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh-----CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL-----GQDVCYIHCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (272)
                      ++++|++|||||++|||++++++|+++|++|++++|+++..++..+++     +.++.++.+|++|+++++++++++.++
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (260)
T 2z1n_A            4 GIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDL   83 (260)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHh
Confidence            578999999999999999999999999999999999987777666554     237899999999999999999999999


Q ss_pred             hCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhh
Q 024145           87 FGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTIS  166 (272)
Q Consensus        87 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~s  166 (272)
                      ++ +|+||||||....  .++.+.+.++|++.+++|+.+++.++++++|+|.+++.|+||++||..+..+.++...|++|
T Consensus        84 ~g-id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  160 (260)
T 2z1n_A           84 GG-ADILVYSTGGPRP--GRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIM  160 (260)
T ss_dssp             TC-CSEEEECCCCCCC--BCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             cC-CCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCchhHHH
Confidence            98 9999999998654  56788999999999999999999999999999987778999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCC-------CChhHH-HHHHhhcCCCCCCCCChHhHHHHHHHH
Q 024145          167 KYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGG-------VDPALI-ESSMSQMGNLKGEFLKTDGIANAALYL  238 (272)
Q Consensus       167 K~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~-------~~~~~~-~~~~~~~~~~~~~~~~~~dva~~~~~l  238 (272)
                      |++++.++++++.|++++||++|+|+||+++|++.....       ...+.. ...+....++ +++.+|+|+|++++||
T Consensus       161 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~~~dva~~v~~l  239 (260)
T 2z1n_A          161 RLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPM-GRVGKPEELASVVAFL  239 (260)
T ss_dssp             THHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC-----------------------CCTT-SSCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHhcCCC-CCccCHHHHHHHHHHH
Confidence            999999999999999999999999999999999865210       001110 1112222344 7889999999999999


Q ss_pred             hcCCCCCccccEEEecCcee
Q 024145          239 ASDESSYVSGQNLVVDGGFS  258 (272)
Q Consensus       239 ~s~~~~~~~G~~i~~dgG~~  258 (272)
                      +++.+++++|++|.+|||+.
T Consensus       240 ~s~~~~~~tG~~i~vdGG~~  259 (260)
T 2z1n_A          240 ASEKASFITGAVIPVDGGAH  259 (260)
T ss_dssp             TSGGGTTCCSCEEEESTTTT
T ss_pred             hCccccCCCCCEEEeCCCcc
Confidence            99988999999999999964

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=9.1e-47  Score=325.49  Aligned_cols=252  Identities=29%  Similarity=0.423  Sum_probs=214.8

Q ss_pred             cCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CC---ceEEEEecCCCHHHHHHHHHH
Q 024145            9 PFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQ---DVCYIHCDISNEDEVINLVDT   82 (272)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~---~~~~~~~D~~~~~~~~~~~~~   82 (272)
                      +|+++++|++|||||++|||++++++|+++|++|++++|+++..++..+++   +.   ++.++.+|++|++++++++++
T Consensus        20 ~m~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~   99 (297)
T 1xhl_A           20 HMARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINT   99 (297)
T ss_dssp             ---CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHH
Confidence            467789999999999999999999999999999999999988777666554   33   789999999999999999999


Q ss_pred             HHHHhCCccEEEeCCCCCCCCCCC--CCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccC-CC
Q 024145           83 AVSKFGKLDIMYNNAGILDRSFGS--ILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAG-LG  159 (272)
Q Consensus        83 ~~~~~g~id~lv~~ag~~~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~-~~  159 (272)
                      +.++++++|+||||||....  .+  +.+.+.++|++++++|+.+++.++++++|.|.+++ |+||++||..+..+. ++
T Consensus       100 ~~~~~g~iD~lvnnAG~~~~--~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~~~~~  176 (297)
T 1xhl_A          100 TLAKFGKIDILVNNAGANLA--DGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQAHSG  176 (297)
T ss_dssp             HHHHHSCCCEEEECCCCCCC--CSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSCCTT
T ss_pred             HHHhcCCCCEEEECCCcCcC--CCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccCCCCC
Confidence            99999999999999998655  44  78899999999999999999999999999998766 999999999988887 88


Q ss_pred             CchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChh------HHHHHHhhcCCCCCCCCChHhHHH
Q 024145          160 SPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPA------LIESSMSQMGNLKGEFLKTDGIAN  233 (272)
Q Consensus       160 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~dva~  233 (272)
                      ...|++||+|++.|+++++.|++++||+||+|+||+++|++.........      ...+......+. +++.+|+|+|+
T Consensus       177 ~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~pedvA~  255 (297)
T 1xhl_A          177 YPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPV-GHCGKPEEIAN  255 (297)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTT-SSCBCHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHHHHhcCCC-CCCcCHHHHHH
Confidence            89999999999999999999999999999999999999998653210110      111111122333 78999999999


Q ss_pred             HHHHHhcCC-CCCccccEEEecCceeeccCcc
Q 024145          234 AALYLASDE-SSYVSGQNLVVDGGFSVVNPTV  264 (272)
Q Consensus       234 ~~~~l~s~~-~~~~~G~~i~~dgG~~~~~~~~  264 (272)
                      +++||++++ +.+++|++|.+|||..+.....
T Consensus       256 ~v~~l~s~~~~~~itG~~i~vdGG~~~~~~~~  287 (297)
T 1xhl_A          256 IIVFLADRNLSSYIIGQSIVADGGSTLVMGMQ  287 (297)
T ss_dssp             HHHHHHCHHHHTTCCSCEEEESTTGGGCCGGG
T ss_pred             HHHHHhCCcccCCccCcEEEECCCcccccccc
Confidence            999999987 8899999999999987754443

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=100.00  E-value=2.1e-46  Score=320.71  Aligned_cols=245  Identities=27%  Similarity=0.453  Sum_probs=215.6

Q ss_pred             cCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145            9 PFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      .+.+++||++|||||++|||++++++|+++|++|++++|+.+..+++.++++.++.++.+|++|.++++++++++ ++++
T Consensus        24 ~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~-~~~~  102 (281)
T 3ppi_A           24 TIKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAA-NQLG  102 (281)
T ss_dssp             CCGGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHH-TTSS
T ss_pred             hhhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHH-HHhC
Confidence            356789999999999999999999999999999999999999998888888889999999999999999999999 7889


Q ss_pred             CccEEEeC-CCCCCCCCCCC-----CCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcC------CCCceEEEEeccccccc
Q 024145           89 KLDIMYNN-AGILDRSFGSI-----LDTPKSDLERLINVNTIGGFLGAKHAARVMVP------QQKGCILFTASACTEIA  156 (272)
Q Consensus        89 ~id~lv~~-ag~~~~~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~------~~~g~iv~iss~~~~~~  156 (272)
                      ++|++||| +|....  ..+     .+.+.++|++.+++|+.+++.+++.+++.|.+      ++.|+||++||..+..+
T Consensus       103 ~id~lv~~aag~~~~--~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  180 (281)
T 3ppi_A          103 RLRYAVVAHGGFGVA--QRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEG  180 (281)
T ss_dssp             EEEEEEECCCCCCCC--CCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSC
T ss_pred             CCCeEEEccCccccc--ccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCC
Confidence            99999999 554332  222     46889999999999999999999999999976      56799999999999999


Q ss_pred             CCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHH
Q 024145          157 GLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAAL  236 (272)
Q Consensus       157 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  236 (272)
                      .++...|++||+|+++|+++++.|++++||+||+|+||+++|++...  ...+..... ....++.+++.+|||+|++++
T Consensus       181 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~--~~~~~~~~~-~~~~~~~~~~~~pedvA~~v~  257 (281)
T 3ppi_A          181 QIGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMES--VGEEALAKF-AANIPFPKRLGTPDEFADAAA  257 (281)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT--TCHHHHHHH-HHTCCSSSSCBCHHHHHHHHH
T ss_pred             CCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhc--ccHHHHHHH-HhcCCCCCCCCCHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999874  222333333 333344478999999999999


Q ss_pred             HHhcCCCCCccccEEEecCceeecc
Q 024145          237 YLASDESSYVSGQNLVVDGGFSVVN  261 (272)
Q Consensus       237 ~l~s~~~~~~~G~~i~~dgG~~~~~  261 (272)
                      ||+++  .+++|++|.+|||..+..
T Consensus       258 ~l~s~--~~~tG~~i~vdGG~~~~p  280 (281)
T 3ppi_A          258 FLLTN--GYINGEVMRLDGAQRFTP  280 (281)
T ss_dssp             HHHHC--SSCCSCEEEESTTCCCCC
T ss_pred             HHHcC--CCcCCcEEEECCCcccCC
Confidence            99985  689999999999998764

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=100.00  E-value=7.3e-47  Score=320.18  Aligned_cols=235  Identities=28%  Similarity=0.442  Sum_probs=206.9

Q ss_pred             cCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145            9 PFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      +|+++++|++|||||++|||++++++|+++|++|++++|+.+..+      ..++.++.+|++|+++++++++++.+++|
T Consensus        22 ~m~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~------~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   95 (260)
T 3un1_A           22 SMMRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA------DPDIHTVAGDISKPETADRIVREGIERFG   95 (260)
T ss_dssp             HHHHTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS------STTEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred             hhhCcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc------cCceEEEEccCCCHHHHHHHHHHHHHHCC
Confidence            456789999999999999999999999999999999999876432      23689999999999999999999999999


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccc--cCCCCchhhhh
Q 024145           89 KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEI--AGLGSPAYTIS  166 (272)
Q Consensus        89 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~--~~~~~~~Y~~s  166 (272)
                      ++|+||||||+...  .++.+.+.++|++++++|+.+++.++++++|+|.+++.|+||++||..+..  +.++...|++|
T Consensus        96 ~iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~s  173 (260)
T 3un1_A           96 RIDSLVNNAGVFLA--KPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVGMPSALASLT  173 (260)
T ss_dssp             CCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCBTTCCCHHHHHH
T ss_pred             CCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCCCCCccHHHHHH
Confidence            99999999998765  678899999999999999999999999999999988899999999987764  34456799999


Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCc
Q 024145          167 KYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYV  246 (272)
Q Consensus       167 K~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  246 (272)
                      |+|+++|+++++.|++++||+||+|+||+++||+...      ..........++ +++.+|+|+|++++||  +++.++
T Consensus       174 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~------~~~~~~~~~~p~-~r~~~~~dva~av~~L--~~~~~i  244 (260)
T 3un1_A          174 KGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPA------ETHSTLAGLHPV-GRMGEIRDVVDAVLYL--EHAGFI  244 (260)
T ss_dssp             HHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCG------GGHHHHHTTSTT-SSCBCHHHHHHHHHHH--HHCTTC
T ss_pred             HHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCH------HHHHHHhccCCC-CCCcCHHHHHHHHHHh--cccCCC
Confidence            9999999999999999999999999999999998752      222333344444 8999999999999999  456899


Q ss_pred             cccEEEecCceeec
Q 024145          247 SGQNLVVDGGFSVV  260 (272)
Q Consensus       247 ~G~~i~~dgG~~~~  260 (272)
                      +|++|.+|||..+.
T Consensus       245 tG~~i~vdGG~~~~  258 (260)
T 3un1_A          245 TGEILHVDGGQNAG  258 (260)
T ss_dssp             CSCEEEESTTGGGC
T ss_pred             CCcEEEECCCeecc
Confidence            99999999998753

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=100.00  E-value=4.1e-47  Score=319.38  Aligned_cols=245  Identities=24%  Similarity=0.382  Sum_probs=200.5

Q ss_pred             CCCCCCCccCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHH
Q 024145            1 MNGPSSAAPFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLV   80 (272)
Q Consensus         1 m~~~~~~~~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   80 (272)
                      |..........++++|++|||||++|||++++++|+++|++|++++|+++..++        +..+.+|++|++++++++
T Consensus         1 m~~~~~~~~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~--------~~~~~~D~~~~~~~~~~~   72 (247)
T 1uzm_A            1 MTATATEGAKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG--------LFGVEVDVTDSDAVDRAF   72 (247)
T ss_dssp             --------CCCCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT--------SEEEECCTTCHHHHHHHH
T ss_pred             CCCcccCcccccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH--------hcCeeccCCCHHHHHHHH
Confidence            333333344567899999999999999999999999999999999998765432        224889999999999999


Q ss_pred             HHHHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCC
Q 024145           81 DTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGS  160 (272)
Q Consensus        81 ~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~  160 (272)
                      +++.++++++|+||||||....  .++.+.+.++|++++++|+.+++.++++++|+|.+++.|+||++||..+..+.+..
T Consensus        73 ~~~~~~~g~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  150 (247)
T 1uzm_A           73 TAVEEHQGPVEVLVSNAGLSAD--AFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQ  150 (247)
T ss_dssp             HHHHHHHSSCSEEEEECSCCC-------CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CC
T ss_pred             HHHHHHcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCCCCC
Confidence            9999999999999999998754  67788999999999999999999999999999988778999999999999888899


Q ss_pred             chhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhc
Q 024145          161 PAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLAS  240 (272)
Q Consensus       161 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  240 (272)
                      ..|++||+|++.|+++++.|++++||++|+|+||+++|++....  . +...+......+. +++.+|+|+|++++||++
T Consensus       151 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~-~~~~~~~~~~~p~-~~~~~~~dvA~~~~~l~s  226 (247)
T 1uzm_A          151 ANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRAL--D-ERIQQGALQFIPA-KRVGTPAEVAGVVSFLAS  226 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHS--C-HHHHHHHGGGCTT-CSCBCHHHHHHHHHHHHS
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhhc--C-HHHHHHHHhcCCC-CCCcCHHHHHHHHHHHcC
Confidence            99999999999999999999999999999999999999986531  1 2222222233344 788999999999999999


Q ss_pred             CCCCCccccEEEecCceee
Q 024145          241 DESSYVSGQNLVVDGGFSV  259 (272)
Q Consensus       241 ~~~~~~~G~~i~~dgG~~~  259 (272)
                      ++..+++|++|.+|||..+
T Consensus       227 ~~~~~~~G~~i~vdgG~~~  245 (247)
T 1uzm_A          227 EDASYISGAVIPVDGGMGM  245 (247)
T ss_dssp             GGGTTCCSCEEEESTTTTC
T ss_pred             ccccCCcCCEEEECCCccc
Confidence            9889999999999999754

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=100.00  E-value=3.7e-46  Score=319.11  Aligned_cols=250  Identities=20%  Similarity=0.238  Sum_probs=214.5

Q ss_pred             ccCCCCCCcEEEEeCCC--ChHHHHHHHHHHHcCCeEEEeecCc--chHHHHHHHhCCceEEEEecCCCHHHHHHHHHHH
Q 024145            8 APFKRLEGKVAIITGGA--SGIGAMAVELFHENGAKVVIADVQD--KLGEDLADKLGQDVCYIHCDISNEDEVINLVDTA   83 (272)
Q Consensus         8 ~~~~~l~~k~vlItGas--~giG~aia~~la~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   83 (272)
                      ..|.++++|++|||||+  +|||++++++|+++|++|++++|+.  +..+++.++. .++.++.+|+++.++++++++++
T Consensus        19 ~~M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~-~~~~~~~~Dl~~~~~v~~~~~~~   97 (280)
T 3nrc_A           19 SHMGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEF-NPAAVLPCDVISDQEIKDLFVEL   97 (280)
T ss_dssp             ---CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGG-CCSEEEECCTTCHHHHHHHHHHH
T ss_pred             CcccccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhc-CCceEEEeecCCHHHHHHHHHHH
Confidence            45778999999999998  7799999999999999999999987  3344444444 35899999999999999999999


Q ss_pred             HHHhCCccEEEeCCCCCCCC--CCCCCC-CCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCC
Q 024145           84 VSKFGKLDIMYNNAGILDRS--FGSILD-TPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGS  160 (272)
Q Consensus        84 ~~~~g~id~lv~~ag~~~~~--~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~  160 (272)
                      .++++++|+||||||+....  ..++.+ .+.++|++.+++|+.+++.++++++++|.++ .|+||++||..+..+.++.
T Consensus        98 ~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~  176 (280)
T 3nrc_A           98 GKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNR-NASMVALTYIGAEKAMPSY  176 (280)
T ss_dssp             HHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-TCEEEEEECGGGTSCCTTT
T ss_pred             HHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CCeEEEEeccccccCCCCc
Confidence            99999999999999986531  133444 8899999999999999999999999999865 7999999999999999999


Q ss_pred             chhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhc
Q 024145          161 PAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLAS  240 (272)
Q Consensus       161 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  240 (272)
                      ..|++||+|+++|+++++.|++++||+||+|+||+++|++...... .+...+......+. +++.+|||+|++++||++
T Consensus       177 ~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~p~-~~~~~pedvA~~v~~l~s  254 (280)
T 3nrc_A          177 NTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISN-FKKMLDYNAMVSPL-KKNVDIMEVGNTVAFLCS  254 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTT-HHHHHHHHHHHSTT-CSCCCHHHHHHHHHHTTS
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcc-hHHHHHHHHhcCCC-CCCCCHHHHHHHHHHHhC
Confidence            9999999999999999999999999999999999999999874322 23333334444444 789999999999999999


Q ss_pred             CCCCCccccEEEecCceeecc
Q 024145          241 DESSYVSGQNLVVDGGFSVVN  261 (272)
Q Consensus       241 ~~~~~~~G~~i~~dgG~~~~~  261 (272)
                      +++.+++|++|.+|||..+..
T Consensus       255 ~~~~~~tG~~i~vdgG~~~~~  275 (280)
T 3nrc_A          255 DMATGITGEVVHVDAGYHCVS  275 (280)
T ss_dssp             GGGTTCCSCEEEESTTGGGCC
T ss_pred             cccCCcCCcEEEECCCccccC
Confidence            999999999999999998753

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.2e-47  Score=327.68  Aligned_cols=244  Identities=20%  Similarity=0.251  Sum_probs=214.4

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCC---eEEEeecCcchHHHHHHHh-----CCceEEEEecCCCHHHHHHHHH
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGA---KVVIADVQDKLGEDLADKL-----GQDVCYIHCDISNEDEVINLVD   81 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~---~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~   81 (272)
                      +.+++||++|||||++|||++++++|+++|+   +|++++|+.+..+++.+++     +.++.++.+|++|+++++++++
T Consensus        28 ~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~  107 (287)
T 3rku_A           28 AERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIE  107 (287)
T ss_dssp             HHHHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHH
T ss_pred             hhhcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHH
Confidence            3458999999999999999999999999998   9999999998887777655     4679999999999999999999


Q ss_pred             HHHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCc
Q 024145           82 TAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSP  161 (272)
Q Consensus        82 ~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  161 (272)
                      ++.+++|++|+||||||.... ..++.+.+.++|++++++|+.+++.++++++|+|.+++.|+||++||..+..+.++..
T Consensus       108 ~~~~~~g~iD~lVnnAG~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~  186 (287)
T 3rku_A          108 NLPQEFKDIDILVNNAGKALG-SDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGS  186 (287)
T ss_dssp             TSCGGGCSCCEEEECCCCCCC-CCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCH
T ss_pred             HHHHhcCCCCEEEECCCcCCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCCCCCCc
Confidence            999999999999999998653 2678899999999999999999999999999999888889999999999999999999


Q ss_pred             hhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCC-ChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhc
Q 024145          162 AYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGV-DPALIESSMSQMGNLKGEFLKTDGIANAALYLAS  240 (272)
Q Consensus       162 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  240 (272)
                      .|++||+|+++|+++++.|++++||+||+|+||+++|++...... ..+........     ....+|||+|++++||++
T Consensus       187 ~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~-----~~p~~pedvA~~v~~l~s  261 (287)
T 3rku_A          187 IYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVYKD-----TTPLMADDVADLIVYATS  261 (287)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTCHHHHHHHHTT-----SCCEEHHHHHHHHHHHHT
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCcHHHHHHhhcc-----cCCCCHHHHHHHHHHHhC
Confidence            999999999999999999999999999999999999998542111 12222222221     223489999999999999


Q ss_pred             CCCCCccccEEEecCceee
Q 024145          241 DESSYVSGQNLVVDGGFSV  259 (272)
Q Consensus       241 ~~~~~~~G~~i~~dgG~~~  259 (272)
                      +...+++|+.+.+|||...
T Consensus       262 ~~~~~i~g~~i~v~~g~~~  280 (287)
T 3rku_A          262 RKQNTVIADTLIFPTNQAS  280 (287)
T ss_dssp             SCTTEEEEEEEEEETTEEE
T ss_pred             CCCCeEecceEEeeCCCCC
Confidence            9999999999999999875

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=2.6e-46  Score=318.46  Aligned_cols=249  Identities=30%  Similarity=0.473  Sum_probs=212.1

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      .+++||++|||||++|||++++++|+++|++|++++|+++..+++.+++. .+.++.+|++|+++++++++++.++++++
T Consensus         5 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   83 (270)
T 1yde_A            5 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP-GAVFILCDVTQEDDVKTLVSETIRRFGRL   83 (270)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT-TEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc-CCeEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            35789999999999999999999999999999999999887777766664 48899999999999999999999999999


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHH
Q 024145           91 DIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGI  170 (272)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~  170 (272)
                      |+||||||.... ..++.+.+.++|++.+++|+.+++.++++++|+|.++ .|+||++||..+..+.+....|++||+++
T Consensus        84 D~lv~nAg~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKaa~  161 (270)
T 1yde_A           84 DCVVNNAGHHPP-PQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAIGQAQAVPYVATKGAV  161 (270)
T ss_dssp             CEEEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHHHHHCCTTCHHHHHHHHHH
T ss_pred             CEEEECCCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-CCEEEEEcCccccCCCCCCcccHHHHHHH
Confidence            999999998643 2567888999999999999999999999999999754 69999999999988889999999999999


Q ss_pred             HHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCC---CChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCcc
Q 024145          171 LGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGG---VDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVS  247 (272)
Q Consensus       171 ~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  247 (272)
                      ++|+++++.|++++||++|+|+||+++|++.....   ..............++ +++.+|+|+|++++||+++ +++++
T Consensus       162 ~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~p~dva~~v~~L~s~-~~~it  239 (270)
T 1yde_A          162 TAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPL-GRMGQPAEVGAAAVFLASE-ANFCT  239 (270)
T ss_dssp             HHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTT-SSCBCHHHHHHHHHHHHHH-CTTCC
T ss_pred             HHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhcCCC-CCCcCHHHHHHHHHHHccc-CCCcC
Confidence            99999999999999999999999999999864210   1111111111122344 7899999999999999997 78999


Q ss_pred             ccEEEecCceeeccCcc
Q 024145          248 GQNLVVDGGFSVVNPTV  264 (272)
Q Consensus       248 G~~i~~dgG~~~~~~~~  264 (272)
                      |++|.+|||..+.....
T Consensus       240 G~~i~vdGG~~~~~~~~  256 (270)
T 1yde_A          240 GIELLVTGGAELGYGCK  256 (270)
T ss_dssp             SCEEEESTTTTSCC---
T ss_pred             CCEEEECCCeecccCcC
Confidence            99999999987754433

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=100.00  E-value=2.3e-46  Score=316.21  Aligned_cols=243  Identities=27%  Similarity=0.391  Sum_probs=209.1

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      ++++|++|||||++|||++++++|+++|++|++++|+++  ++..+++   +.++.++.+|++|+++++++++++.++++
T Consensus         1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   78 (255)
T 2q2v_A            1 TLKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFG   78 (255)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            368999999999999999999999999999999999876  3333333   55788999999999999999999999999


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHH
Q 024145           89 KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKY  168 (272)
Q Consensus        89 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~  168 (272)
                      ++|+||||||....  .++.+.+.++|++.+++|+.+++.++++++|+|.+++.|+||++||..+..+.++...|++||+
T Consensus        79 ~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  156 (255)
T 2q2v_A           79 GVDILVNNAGIQHV--APVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKH  156 (255)
T ss_dssp             SCSEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred             CCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCCCCchhHHHHHH
Confidence            99999999998654  5678889999999999999999999999999998877899999999999998899999999999


Q ss_pred             HHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHH---H----HHH-hhcCCCCCCCCChHhHHHHHHHHhc
Q 024145          169 GILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALI---E----SSM-SQMGNLKGEFLKTDGIANAALYLAS  240 (272)
Q Consensus       169 a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~---~----~~~-~~~~~~~~~~~~~~dva~~~~~l~s  240 (272)
                      ++++|+++++.|++++||++|+|+||+++|++...........   .    ..+ ....+. +++.+|+|+|++++||++
T Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~dvA~~~~~l~s  235 (255)
T 2q2v_A          157 GVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPS-LAFVTPEHLGELVLFLCS  235 (255)
T ss_dssp             HHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHHHTTTCTT-CCCBCHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhcccccccccchHHHHHHHHhccCCC-CCCcCHHHHHHHHHHHhC
Confidence            9999999999999999999999999999999865200000111   0    111 222333 789999999999999999


Q ss_pred             CCCCCccccEEEecCceee
Q 024145          241 DESSYVSGQNLVVDGGFSV  259 (272)
Q Consensus       241 ~~~~~~~G~~i~~dgG~~~  259 (272)
                      +++.+++|++|.+|||..+
T Consensus       236 ~~~~~~tG~~~~vdgG~~~  254 (255)
T 2q2v_A          236 EAGSQVRGAAWNVDGGWLA  254 (255)
T ss_dssp             GGGTTCCSCEEEESTTGGG
T ss_pred             CccCCCCCCEEEECCCccC
Confidence            9889999999999999753

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=100.00  E-value=3.9e-46  Score=319.43  Aligned_cols=245  Identities=26%  Similarity=0.436  Sum_probs=209.1

Q ss_pred             cCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcch-HHHHHH---HhCCceEEEEecCCCHHHHHHHHHHHH
Q 024145            9 PFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKL-GEDLAD---KLGQDVCYIHCDISNEDEVINLVDTAV   84 (272)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~-~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~   84 (272)
                      +.++++||++|||||++|||++++++|+++|++|++++|+.+. .++..+   ..+.++.++.+|++|.++++++++++.
T Consensus        23 ~~~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  102 (283)
T 1g0o_A           23 QSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAV  102 (283)
T ss_dssp             GGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHH
Confidence            3466899999999999999999999999999999999998654 333333   336689999999999999999999999


Q ss_pred             HHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCC-Cchh
Q 024145           85 SKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLG-SPAY  163 (272)
Q Consensus        85 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~-~~~Y  163 (272)
                      ++++++|+||||||....  .++.+.+.++|++.+++|+.+++.++++++++|  ++.|+||++||..+..+.+. ...|
T Consensus       103 ~~~g~iD~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~--~~~g~iv~isS~~~~~~~~~~~~~Y  178 (283)
T 1g0o_A          103 KIFGKLDIVCSNSGVVSF--GHVKDVTPEEFDRVFTINTRGQFFVAREAYKHL--EIGGRLILMGSITGQAKAVPKHAVY  178 (283)
T ss_dssp             HHHSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHS--CTTCEEEEECCGGGTCSSCSSCHHH
T ss_pred             HHcCCCCEEEECCCcCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHH--hcCCeEEEEechhhccCCCCCCcch
Confidence            999999999999998754  678889999999999999999999999999999  35699999999998887664 8899


Q ss_pred             hhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCC-----CC---hhHHHHHHhh--cCCCCCCCCChHhHHH
Q 024145          164 TISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGG-----VD---PALIESSMSQ--MGNLKGEFLKTDGIAN  233 (272)
Q Consensus       164 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~-----~~---~~~~~~~~~~--~~~~~~~~~~~~dva~  233 (272)
                      ++||+++++|+++++.|++++||+||+|+||+++|++.....     ..   .++..+.+..  ..++ +++.+|+|+|+
T Consensus       179 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~p~dvA~  257 (283)
T 1g0o_A          179 SGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPL-RRVGLPIDIAR  257 (283)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTT-CSCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCCCC-CCCcCHHHHHH
Confidence            999999999999999999999999999999999999754210     00   1112222222  3344 78999999999


Q ss_pred             HHHHHhcCCCCCccccEEEecCcee
Q 024145          234 AALYLASDESSYVSGQNLVVDGGFS  258 (272)
Q Consensus       234 ~~~~l~s~~~~~~~G~~i~~dgG~~  258 (272)
                      +++||+++.+++++|++|.+|||..
T Consensus       258 ~v~~l~s~~~~~itG~~i~vdgG~~  282 (283)
T 1g0o_A          258 VVCFLASNDGGWVTGKVIGIDGGAC  282 (283)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred             HHHHHhCccccCcCCCEEEeCCCcc
Confidence            9999999999999999999999975

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=100.00  E-value=7e-46  Score=314.96  Aligned_cols=248  Identities=23%  Similarity=0.291  Sum_probs=214.9

Q ss_pred             CCCCCcEEEEeCCC--ChHHHHHHHHHHHcCCeEEEeecCcchHHHHH---HHhCC-ceEEEEecCCCHHHHHHHHHHHH
Q 024145           11 KRLEGKVAIITGGA--SGIGAMAVELFHENGAKVVIADVQDKLGEDLA---DKLGQ-DVCYIHCDISNEDEVINLVDTAV   84 (272)
Q Consensus        11 ~~l~~k~vlItGas--~giG~aia~~la~~G~~V~~~~r~~~~~~~~~---~~~~~-~~~~~~~D~~~~~~~~~~~~~~~   84 (272)
                      ++++||++|||||+  +|||++++++|+++|++|++++|+....+...   ++.+. ++.++.+|++|+++++++++++.
T Consensus         3 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   82 (266)
T 3oig_A            3 FSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIK   82 (266)
T ss_dssp             SCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHH
T ss_pred             cccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHH
Confidence            46899999999999  66999999999999999999999865444333   33343 79999999999999999999999


Q ss_pred             HHhCCccEEEeCCCCCCCC--CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCch
Q 024145           85 SKFGKLDIMYNNAGILDRS--FGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPA  162 (272)
Q Consensus        85 ~~~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  162 (272)
                      ++++++|+||||||.....  ..++.+.+.+++++.+++|+.+++.++++++|+|.+  .|+||++||..+..+.++...
T Consensus        83 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~  160 (266)
T 3oig_A           83 EQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTE--GGSIVTLTYLGGELVMPNYNV  160 (266)
T ss_dssp             HHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT--CEEEEEEECGGGTSCCTTTHH
T ss_pred             HHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCC--CceEEEEecccccccCCCcch
Confidence            9999999999999987521  256788999999999999999999999999999964  699999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCC
Q 024145          163 YTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDE  242 (272)
Q Consensus       163 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  242 (272)
                      |++||+|+++|+++++.|++++||+||+|+||+++|++...... ............+. +++.+|+|+|++++||++++
T Consensus       161 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~~~-~~~~~p~dva~~v~~l~s~~  238 (266)
T 3oig_A          161 MGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISD-FNSILKDIEERAPL-RRTTTPEEVGDTAAFLFSDM  238 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTT-HHHHHHHHHHHSTT-SSCCCHHHHHHHHHHHHSGG
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccc-hHHHHHHHHhcCCC-CCCCCHHHHHHHHHHHcCCc
Confidence            99999999999999999999999999999999999999874322 22333333344444 78999999999999999999


Q ss_pred             CCCccccEEEecCceeeccC
Q 024145          243 SSYVSGQNLVVDGGFSVVNP  262 (272)
Q Consensus       243 ~~~~~G~~i~~dgG~~~~~~  262 (272)
                      +.+++|++|.+|||+....+
T Consensus       239 ~~~~tG~~i~vdGG~~~~~~  258 (266)
T 3oig_A          239 SRGITGENLHVDSGFHITAR  258 (266)
T ss_dssp             GTTCCSCEEEESTTGGGCCC
T ss_pred             hhcCcCCEEEECCCeEEeee
Confidence            99999999999999988644

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=1.5e-46  Score=321.62  Aligned_cols=246  Identities=29%  Similarity=0.396  Sum_probs=212.2

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CC---ceEEEEecCCCHHHHHHHHHHHH
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQ---DVCYIHCDISNEDEVINLVDTAV   84 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~---~~~~~~~D~~~~~~~~~~~~~~~   84 (272)
                      .++++|++|||||++|||++++++|+++|++|++++|+++..++..+++   +.   ++.++.+|++|+++++++++++.
T Consensus         2 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   81 (280)
T 1xkq_A            2 PRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTL   81 (280)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999988777666554   33   78999999999999999999999


Q ss_pred             HHhCCccEEEeCCCCCCCCCCC----CCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccC-CC
Q 024145           85 SKFGKLDIMYNNAGILDRSFGS----ILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAG-LG  159 (272)
Q Consensus        85 ~~~g~id~lv~~ag~~~~~~~~----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~-~~  159 (272)
                      ++++++|+||||||....  .+    +.+.+.++|++.+++|+.+++.++++++|+|.+++ |+||++||..+..+. ++
T Consensus        82 ~~~g~iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~  158 (280)
T 1xkq_A           82 KQFGKIDVLVNNAGAAIP--DAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQPD  158 (280)
T ss_dssp             HHHSCCCEEEECCCCCCC--CTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSCCCS
T ss_pred             HhcCCCCEEEECCCCCCC--CCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccCCCCCc
Confidence            999999999999998654  44    67889999999999999999999999999997655 999999999988887 88


Q ss_pred             CchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChh------HHHHHHhhcCCCCCCCCChHhHHH
Q 024145          160 SPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPA------LIESSMSQMGNLKGEFLKTDGIAN  233 (272)
Q Consensus       160 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~dva~  233 (272)
                      ...|++||+++++|+++++.|++++||+||+|+||+++|++.........      +..+......+. +++.+|||+|+
T Consensus       159 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~pedvA~  237 (280)
T 1xkq_A          159 FLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPI-GAAGKPEHIAN  237 (280)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTT-SSCBCHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHHHcCCCC-CCCCCHHHHHH
Confidence            89999999999999999999999999999999999999998653210111      111111122233 78999999999


Q ss_pred             HHHHHhcCC-CCCccccEEEecCceeec
Q 024145          234 AALYLASDE-SSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       234 ~~~~l~s~~-~~~~~G~~i~~dgG~~~~  260 (272)
                      +++||+++. +.+++|++|.+|||..+.
T Consensus       238 ~v~~l~s~~~~~~~tG~~i~vdgG~~~~  265 (280)
T 1xkq_A          238 IILFLADRNLSFYILGQSIVADGGTSLV  265 (280)
T ss_dssp             HHHHHHCHHHHTTCCSCEEEESTTGGGC
T ss_pred             HHHHhcCcccccCccCCeEEECCCcccc
Confidence            999999987 889999999999998764

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=100.00  E-value=1.5e-46  Score=320.70  Aligned_cols=234  Identities=28%  Similarity=0.314  Sum_probs=203.8

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcch-------HHHHHH---HhCCceEEEEecCCCHHHHHHHH
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKL-------GEDLAD---KLGQDVCYIHCDISNEDEVINLV   80 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~-------~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~   80 (272)
                      ++++||++|||||++|||++++++|+++|++|++++|+.+.       .++..+   ..+.++.++++|++|++++++++
T Consensus         2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   81 (274)
T 3e03_A            2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAV   81 (274)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence            46899999999999999999999999999999999998753       333333   33678999999999999999999


Q ss_pred             HHHHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccccccc--CC
Q 024145           81 DTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIA--GL  158 (272)
Q Consensus        81 ~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~--~~  158 (272)
                      +++.+++|++|+||||||+...  .++.+.+.++|++++++|+.+++.++++++|+|.+++.|+||++||..+..+  .+
T Consensus        82 ~~~~~~~g~iD~lvnnAG~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~  159 (274)
T 3e03_A           82 AATVDTFGGIDILVNNASAIWL--RGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWG  159 (274)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCC--CCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHHHH
T ss_pred             HHHHHHcCCCCEEEECCCcccC--CCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCC
Confidence            9999999999999999998765  6788899999999999999999999999999999888999999999998877  67


Q ss_pred             CCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCC-cccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHH
Q 024145          159 GSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPY-GLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALY  237 (272)
Q Consensus       159 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  237 (272)
                      +...|++||+|+++|+++++.|++++||+||+|+|| +++|++.....            ..+. .++.+|||+|++++|
T Consensus       160 ~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~~~~~------------~~~~-~~~~~pedvA~~v~~  226 (274)
T 3e03_A          160 AHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAINMLP------------GVDA-AACRRPEIMADAAHA  226 (274)
T ss_dssp             HCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC-------------------CCCG-GGSBCTHHHHHHHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchhhhcc------------cccc-cccCCHHHHHHHHHH
Confidence            788999999999999999999999999999999999 69999874210            0111 457899999999999


Q ss_pred             HhcCCCCCccccEEEecCceeec
Q 024145          238 LASDESSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       238 l~s~~~~~~~G~~i~~dgG~~~~  260 (272)
                      |+++++.+++|++| +|||....
T Consensus       227 l~s~~~~~itG~~i-~~~g~~~~  248 (274)
T 3e03_A          227 VLTREAAGFHGQFL-IDDEVLAQ  248 (274)
T ss_dssp             HHTSCCTTCCSCEE-EHHHHHHH
T ss_pred             HhCccccccCCeEE-EcCcchhh
Confidence            99999999999999 88887653

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=100.00  E-value=6.7e-46  Score=315.35  Aligned_cols=241  Identities=22%  Similarity=0.359  Sum_probs=210.5

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEe-ecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHH
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIA-DVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVS   85 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~-~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (272)
                      +.++.+|++|||||++|||++++++|+++|++|++. .|+.+..++..+++   +.++.++.+|++|+++++++++++.+
T Consensus        21 ~~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~  100 (267)
T 4iiu_A           21 QSNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIA  100 (267)
T ss_dssp             ----CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            356789999999999999999999999999999664 56666665555544   56899999999999999999999999


Q ss_pred             HhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhc-CCCCceEEEEecccccccCCCCchhh
Q 024145           86 KFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMV-PQQKGCILFTASACTEIAGLGSPAYT  164 (272)
Q Consensus        86 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~g~iv~iss~~~~~~~~~~~~Y~  164 (272)
                      +++++|+||||||....  .++.+.+.++|++.+++|+.+++.+++.+++.|. +++.|+||++||..+..+.++...|+
T Consensus       101 ~~g~id~li~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  178 (267)
T 4iiu_A          101 QHGAWYGVVSNAGIARD--AAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNRGQVNYS  178 (267)
T ss_dssp             HHCCCSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCCTTCHHHH
T ss_pred             HhCCccEEEECCCCCCC--CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCCCCCchhH
Confidence            99999999999998765  6788899999999999999999999999998886 56789999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCC
Q 024145          165 ISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESS  244 (272)
Q Consensus       165 ~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  244 (272)
                      +||+|+++|+++++.|++++||++++|+||+++|++...   ..+..... ....+. +++.+|||+|++++||+++++.
T Consensus       179 asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~---~~~~~~~~-~~~~p~-~~~~~~edva~~~~~L~s~~~~  253 (267)
T 4iiu_A          179 AAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEM---EESALKEA-MSMIPM-KRMGQAEEVAGLASYLMSDIAG  253 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCC---CHHHHHHH-HHTCTT-CSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCcccc---cHHHHHHH-HhcCCC-CCCcCHHHHHHHHHHHhCCccc
Confidence            999999999999999999999999999999999999863   23333333 333444 7899999999999999999999


Q ss_pred             CccccEEEecCce
Q 024145          245 YVSGQNLVVDGGF  257 (272)
Q Consensus       245 ~~~G~~i~~dgG~  257 (272)
                      +++|++|.+|||+
T Consensus       254 ~itG~~i~vdGG~  266 (267)
T 4iiu_A          254 YVTRQVISINGGM  266 (267)
T ss_dssp             TCCSCEEEESTTC
T ss_pred             CccCCEEEeCCCc
Confidence            9999999999996

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=100.00  E-value=5.1e-46  Score=325.02  Aligned_cols=243  Identities=25%  Similarity=0.318  Sum_probs=210.6

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEee-cCcchHHHHHHHh----CCceEEEEecCCCHH----------
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIAD-VQDKLGEDLADKL----GQDVCYIHCDISNED----------   74 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~-r~~~~~~~~~~~~----~~~~~~~~~D~~~~~----------   74 (272)
                      |.++++|++|||||++|||++++++|+++|++|++++ |+.+..+++.+++    +.++.++.+|++|.+          
T Consensus        41 m~~l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~  120 (328)
T 2qhx_A           41 MTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGS  120 (328)
T ss_dssp             ----CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------
T ss_pred             ccccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhccccccccc
Confidence            4558999999999999999999999999999999999 9887776666544    567999999999999          


Q ss_pred             -------HHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCCC--------------HHHHHHHHHHHhHHHHHHHHHH
Q 024145           75 -------EVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTP--------------KSDLERLINVNTIGGFLGAKHA  133 (272)
Q Consensus        75 -------~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~~l~~~~  133 (272)
                             +++++++++.++++++|+||||||+...  .++.+.+              .++|++++++|+.+++.+++++
T Consensus       121 ~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~--~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~  198 (328)
T 2qhx_A          121 APVTLFTRCAELVAACYTHWGRCDVLVNNASSFYP--TPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAF  198 (328)
T ss_dssp             CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCC--CCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             cccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCC--CChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHH
Confidence                   9999999999999999999999998755  5677777              8999999999999999999999


Q ss_pred             HHhhcCCC------CceEEEEecccccccCCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCC
Q 024145          134 ARVMVPQQ------KGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVD  207 (272)
Q Consensus       134 ~~~~~~~~------~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~  207 (272)
                      +|+|.+++      .|+||++||..+..+.++...|++||+|++.|+++++.|++++||+||+|+||+++|++ ..   .
T Consensus       199 ~~~m~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~-~~---~  274 (328)
T 2qhx_A          199 AHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-DM---P  274 (328)
T ss_dssp             HHHHHHSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC-CS---C
T ss_pred             HHHHHhcCCcCCCCCcEEEEECchhhccCCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc-cc---c
Confidence            99998766      79999999999999999999999999999999999999999999999999999999999 42   2


Q ss_pred             hhHHHHHHhhcCCCCC-CCCChHhHHHHHHHHhcCCCCCccccEEEecCceeec
Q 024145          208 PALIESSMSQMGNLKG-EFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       208 ~~~~~~~~~~~~~~~~-~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~  260 (272)
                      ++.... +....++ + ++.+|||+|++++||+++.+.+++|++|.+|||+.+.
T Consensus       275 ~~~~~~-~~~~~p~-~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~~  326 (328)
T 2qhx_A          275 PAVWEG-HRSKVPL-YQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT  326 (328)
T ss_dssp             HHHHHH-HHTTCTT-TTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHHH-HHhhCCC-CCCCCCHHHHHHHHHHHhCccccCccCcEEEECCCcccC
Confidence            322222 2233344 6 8899999999999999998999999999999998653

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=100.00  E-value=3.8e-46  Score=315.77  Aligned_cols=238  Identities=38%  Similarity=0.577  Sum_probs=214.1

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   91 (272)
                      ++++|++|||||++|||++++++|+++|++|++++|+++..++..+++..++.++.+|++|+++++++++++.+++|++|
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD   83 (260)
T 1nff_A            4 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLH   83 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            47899999999999999999999999999999999998887777777766788999999999999999999999999999


Q ss_pred             EEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHHH
Q 024145           92 IMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGIL  171 (272)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~  171 (272)
                      +||||||....  .++.+.+.++|++.+++|+.+++.++++++|+|.+++.|+||++||..+..+.++...|++||++++
T Consensus        84 ~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~  161 (260)
T 1nff_A           84 VLVNNAGILNI--GTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVR  161 (260)
T ss_dssp             EEEECCCCCCC--BCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHH
T ss_pred             EEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCCCCchhHHHHHHHHH
Confidence            99999998754  6778899999999999999999999999999998777899999999999998888999999999999


Q ss_pred             HHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccccEE
Q 024145          172 GLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNL  251 (272)
Q Consensus       172 ~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i  251 (272)
                      .++++++.|++++||++|+|+||+++|++...   ..+.    +. ..+. +++.+|+|+|+++++++++...+++|++|
T Consensus       162 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---~~~~----~~-~~~~-~~~~~~~dvA~~v~~l~s~~~~~~~G~~~  232 (260)
T 1nff_A          162 GLTKSTALELGPSGIRVNSIHPGLVKTPMTDW---VPED----IF-QTAL-GRAAEPVEVSNLVVYLASDESSYSTGAEF  232 (260)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECCBCSGGGTT---SCTT----CS-CCSS-SSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHHHHHhCccCcEEEEEEeCCCCCCcccc---chhh----HH-hCcc-CCCCCHHHHHHHHHHHhCccccCCcCCEE
Confidence            99999999999999999999999999998641   1111    11 2233 78899999999999999998899999999


Q ss_pred             EecCceeec
Q 024145          252 VVDGGFSVV  260 (272)
Q Consensus       252 ~~dgG~~~~  260 (272)
                      .+|||....
T Consensus       233 ~v~gG~~~~  241 (260)
T 1nff_A          233 VVDGGTVAG  241 (260)
T ss_dssp             EESTTGGGS
T ss_pred             EECCCeecc
Confidence            999998763

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=100.00  E-value=5.3e-46  Score=315.60  Aligned_cols=244  Identities=31%  Similarity=0.482  Sum_probs=213.1

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGK   89 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (272)
                      +.++++|++|||||++|||++++++|+++|++|++++|+++.        +.++.++.+|++|+++++++++++.+++|+
T Consensus         3 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~--------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   74 (264)
T 2dtx_A            3 FSDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG--------EAKYDHIECDVTNPDQVKASIDHIFKEYGS   74 (264)
T ss_dssp             CGGGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC--------SCSSEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             ccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc--------CCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            345789999999999999999999999999999999998764        457889999999999999999999999999


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHH
Q 024145           90 LDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYG  169 (272)
Q Consensus        90 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a  169 (272)
                      +|+||||||....  .++.+.+.++|++.+++|+.+++.++++++|.|.+++.|+||++||..+..+.++...|++||++
T Consensus        75 iD~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  152 (264)
T 2dtx_A           75 ISVLVNNAGIESY--GKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHA  152 (264)
T ss_dssp             CCEEEECCCCCCC--BCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred             CCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCCCCchhHHHHHHH
Confidence            9999999998754  67888999999999999999999999999999988788999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCC-----CChh---HHHHHHhhcCCCCCCCCChHhHHHHHHHHhcC
Q 024145          170 ILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGG-----VDPA---LIESSMSQMGNLKGEFLKTDGIANAALYLASD  241 (272)
Q Consensus       170 ~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~-----~~~~---~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  241 (272)
                      ++.|+++++.|++++ |+||+|+||+++|++.....     ....   ...+.+....+. +++.+|+|+|++++||+++
T Consensus       153 ~~~~~~~la~e~~~~-i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~p~dvA~~v~~l~s~  230 (264)
T 2dtx_A          153 VIGLTKSIALDYAPL-LRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPM-QRIGKPQEVASAVAFLASR  230 (264)
T ss_dssp             HHHHHHHHHHHHTTT-SEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHHHSTT-SSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHhcCC-cEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCc
Confidence            999999999999988 99999999999999865210     0110   111222222344 7899999999999999999


Q ss_pred             CCCCccccEEEecCceeeccCccc
Q 024145          242 ESSYVSGQNLVVDGGFSVVNPTVM  265 (272)
Q Consensus       242 ~~~~~~G~~i~~dgG~~~~~~~~~  265 (272)
                      ++.+++|++|.+|||..+.-|..-
T Consensus       231 ~~~~~tG~~i~vdGG~~~~~p~~~  254 (264)
T 2dtx_A          231 EASFITGTCLYVDGGLSIRAPIST  254 (264)
T ss_dssp             GGTTCCSCEEEESTTGGGCCCCCC
T ss_pred             hhcCCCCcEEEECCCcccCCCCCC
Confidence            889999999999999988777653

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=100.00  E-value=3.5e-46  Score=317.48  Aligned_cols=246  Identities=22%  Similarity=0.290  Sum_probs=209.9

Q ss_pred             CCCCCcEEEEeCC--CChHHHHHHHHHHHcCCeEEEeecCcch-HHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           11 KRLEGKVAIITGG--ASGIGAMAVELFHENGAKVVIADVQDKL-GEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        11 ~~l~~k~vlItGa--s~giG~aia~~la~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      .+++||++|||||  ++|||++++++|+++|++|++++|+.+. .+++.++++.++.++.+|++|+++++++++++.+++
T Consensus         3 ~~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   82 (269)
T 2h7i_A            3 GLLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAI   82 (269)
T ss_dssp             CTTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHh
Confidence            3578999999999  9999999999999999999999998765 466666666778899999999999999999999999


Q ss_pred             C---CccEEEeCCCCCCCC---CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCc
Q 024145           88 G---KLDIMYNNAGILDRS---FGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSP  161 (272)
Q Consensus        88 g---~id~lv~~ag~~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  161 (272)
                      |   ++|+||||||...+.   ..++.+.+.++|++.+++|+.+++.++++++|+|.+  .|+||++||..+ .+.+.+.
T Consensus        83 g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~iss~~~-~~~~~~~  159 (269)
T 2h7i_A           83 GAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP--GGSIVGMDFDPS-RAMPAYN  159 (269)
T ss_dssp             CTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECCCS-SCCTTTH
T ss_pred             CCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc--CCeEEEEcCccc-cccCchH
Confidence            9   999999999986521   256788999999999999999999999999999965  489999999876 6778889


Q ss_pred             hhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCC---CChh------HHHHHHhhcCCCCC-CCCChHhH
Q 024145          162 AYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGG---VDPA------LIESSMSQMGNLKG-EFLKTDGI  231 (272)
Q Consensus       162 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~---~~~~------~~~~~~~~~~~~~~-~~~~~~dv  231 (272)
                      .|++||+|+++|+++++.|++++||+||+|+||+++|++.....   ...+      ...+.+....++ + ++.+|||+
T Consensus       160 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~rr~~~p~dv  238 (269)
T 2h7i_A          160 WMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPI-GWNMKDATPV  238 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTT-CCCTTCCHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhccCCc-ccCCCCHHHH
Confidence            99999999999999999999999999999999999999764210   0111      011122233444 6 69999999


Q ss_pred             HHHHHHHhcCCCCCccccEEEecCceeec
Q 024145          232 ANAALYLASDESSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       232 a~~~~~l~s~~~~~~~G~~i~~dgG~~~~  260 (272)
                      |++++||+++++.+++|++|.+|||+.+.
T Consensus       239 A~~v~~L~s~~~~~itG~~i~vdGG~~~~  267 (269)
T 2h7i_A          239 AKTVCALLSDWLPATTGDIIYADGGAHTQ  267 (269)
T ss_dssp             HHHHHHHHSSSCTTCCSEEEEESTTGGGC
T ss_pred             HHHHHHHhCchhccCcceEEEecCCeeee
Confidence            99999999999999999999999997653

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=100.00  E-value=8e-47  Score=318.68  Aligned_cols=238  Identities=26%  Similarity=0.453  Sum_probs=198.6

Q ss_pred             ccCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145            8 APFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus         8 ~~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      .+..++++|++|||||++|||++++++|+++|++|++++|+++..+        .+.++.+|++|+++++++++++.+++
T Consensus        14 ~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~--------~~~~~~~Dl~d~~~v~~~~~~~~~~~   85 (253)
T 2nm0_A           14 LVPRSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE--------GFLAVKCDITDTEQVEQAYKEIEETH   85 (253)
T ss_dssp             ------CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT--------TSEEEECCTTSHHHHHHHHHHHHHHT
T ss_pred             CCccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc--------cceEEEecCCCHHHHHHHHHHHHHHc
Confidence            4456789999999999999999999999999999999999876532        37889999999999999999999999


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhH
Q 024145           88 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISK  167 (272)
Q Consensus        88 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK  167 (272)
                      +++|+||||||....  .++.+.+.++|++.+++|+.+++.++++++|.|.+++.|+||++||..+..+.++...|++||
T Consensus        86 g~iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  163 (253)
T 2nm0_A           86 GPVEVLIANAGVTKD--QLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAGQANYAASK  163 (253)
T ss_dssp             CSCSEEEEECSCCTT--TC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCHHHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCcHHHHHHH
Confidence            999999999998754  667888999999999999999999999999999877789999999999888777788999999


Q ss_pred             HHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCcc
Q 024145          168 YGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVS  247 (272)
Q Consensus       168 ~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  247 (272)
                      +|++.|+++++.|++++||++|+|+||+++|++....   .+...+.+....+. +++.+|+|+|+.+++|+++++.+++
T Consensus       164 ~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~---~~~~~~~~~~~~p~-~~~~~p~dvA~~i~~l~s~~~~~~t  239 (253)
T 2nm0_A          164 AGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVL---TDEQRANIVSQVPL-GRYARPEEIAATVRFLASDDASYIT  239 (253)
T ss_dssp             HHHHHHHHHHHHHHCSSSEEEEEEEECSBCC------------CHHHHHTTCTT-CSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhc---CHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCccccCCc
Confidence            9999999999999999999999999999999987531   11111222223344 7889999999999999999899999


Q ss_pred             ccEEEecCceee
Q 024145          248 GQNLVVDGGFSV  259 (272)
Q Consensus       248 G~~i~~dgG~~~  259 (272)
                      |++|.+|||..+
T Consensus       240 G~~i~vdGG~~~  251 (253)
T 2nm0_A          240 GAVIPVDGGLGM  251 (253)
T ss_dssp             SCEEEESTTTTC
T ss_pred             CcEEEECCcccc
Confidence            999999999754

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=100.00  E-value=3.7e-45  Score=312.02  Aligned_cols=262  Identities=47%  Similarity=0.772  Sum_probs=224.2

Q ss_pred             ccCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCC--ceEEEEecCCCHHHHHHHHHHHHH
Q 024145            8 APFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQ--DVCYIHCDISNEDEVINLVDTAVS   85 (272)
Q Consensus         8 ~~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~   85 (272)
                      .+..++++|++|||||++|||++++++|+++|++|++++|+.+..++..++++.  ++.++.+|++|+++++++++++.+
T Consensus         9 ~~~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   88 (278)
T 2bgk_A            9 SSTNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIA   88 (278)
T ss_dssp             --CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCcccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHH
Confidence            345678999999999999999999999999999999999988777766666643  789999999999999999999999


Q ss_pred             HhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCC-CCchhh
Q 024145           86 KFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGL-GSPAYT  164 (272)
Q Consensus        86 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~-~~~~Y~  164 (272)
                      +++++|+||||||.......++.+.+.++|++.+++|+.+++.++++++++|.+++.++||++||..+..+.+ ....|+
T Consensus        89 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~Y~  168 (278)
T 2bgk_A           89 KHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYT  168 (278)
T ss_dssp             HHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHHH
T ss_pred             HcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCCCCCcchH
Confidence            9999999999999875433567889999999999999999999999999999887889999999999988877 788999


Q ss_pred             hhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCC-hhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCC
Q 024145          165 ISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVD-PALIESSMSQMGNLKGEFLKTDGIANAALYLASDES  243 (272)
Q Consensus       165 ~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  243 (272)
                      +||++++.+++.++.|++++||++++|+||+++|++....... .............+.+++.+|+|+|++++++++++.
T Consensus       169 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~  248 (278)
T 2bgk_A          169 ATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDES  248 (278)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhcccccccccCCHHHHHHHHHHHcCccc
Confidence            9999999999999999999999999999999999987643221 222222222222234788999999999999999888


Q ss_pred             CCccccEEEecCceeeccCccccccc
Q 024145          244 SYVSGQNLVVDGGFSVVNPTVMRAYG  269 (272)
Q Consensus       244 ~~~~G~~i~~dgG~~~~~~~~~~~~~  269 (272)
                      .+++|++|.+|||..+..+.+++.++
T Consensus       249 ~~~~G~~~~v~gg~~~~~~e~~~~i~  274 (278)
T 2bgk_A          249 KYVSGLNLVIDGGYTRTNPAFPTALK  274 (278)
T ss_dssp             TTCCSCEEEESTTGGGCCTHHHHHSC
T ss_pred             ccCCCCEEEECCcccccCCccchhhh
Confidence            89999999999999887776665543

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=100.00  E-value=4.1e-46  Score=313.80  Aligned_cols=238  Identities=29%  Similarity=0.359  Sum_probs=195.4

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+.     +..  .+.++.+|++|+++++++++++.++++++
T Consensus         3 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~-----~~~--~~~~~~~D~~d~~~~~~~~~~~~~~~g~i   75 (250)
T 2fwm_X            3 MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ-----EQY--PFATEVMDVADAAQVAQVCQRLLAETERL   75 (250)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS-----SCC--SSEEEECCTTCHHHHHHHHHHHHHHCSCC
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh-----hcC--CceEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            35789999999999999999999999999999999998653     112  27889999999999999999999999999


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHH
Q 024145           91 DIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGI  170 (272)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~  170 (272)
                      |+||||||....  .++.+.+.++|++.+++|+.+++.++++++|+|.+++.|+||++||..+..+.++...|++||+++
T Consensus        76 d~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~  153 (250)
T 2fwm_X           76 DALVNAAGILRM--GATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAAL  153 (250)
T ss_dssp             CEEEECCCCCCC--CCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred             CEEEECCCcCCC--CCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCCchHHHHHHHH
Confidence            999999998754  678889999999999999999999999999999887789999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHH-HHhh-------cCCCCCCCCChHhHHHHHHHHhcCC
Q 024145          171 LGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIES-SMSQ-------MGNLKGEFLKTDGIANAALYLASDE  242 (272)
Q Consensus       171 ~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~-~~~~-------~~~~~~~~~~~~dva~~~~~l~s~~  242 (272)
                      +.|+++++.|++++||++|+|+||+++|++....... +...+ .+..       ..++ +++.+|||+|++++||++++
T Consensus       154 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~-~~~~~p~dvA~~v~~l~s~~  231 (250)
T 2fwm_X          154 KSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVS-DDAEEQRIRGFGEQFKLGIPL-GKIARPQEIANTILFLASDL  231 (250)
T ss_dssp             HHHHHHHHHHHGGGTCEEEEEEECCC--------------------------------------CHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHhCccCCEEEEEECCcccCccccccccC-hhHHHHHHhhhhhcccccCCC-CCCcCHHHHHHHHHHHhCcc
Confidence            9999999999999999999999999999986532111 11111 1111       2233 78899999999999999998


Q ss_pred             CCCccccEEEecCceee
Q 024145          243 SSYVSGQNLVVDGGFSV  259 (272)
Q Consensus       243 ~~~~~G~~i~~dgG~~~  259 (272)
                      +.+++|++|.+|||..+
T Consensus       232 ~~~~tG~~i~vdGG~~~  248 (250)
T 2fwm_X          232 ASHITLQDIVVDGGSTL  248 (250)
T ss_dssp             GTTCCSCEEEESTTTTT
T ss_pred             ccCCCCCEEEECCCccc
Confidence            89999999999999754

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=100.00  E-value=2.7e-46  Score=326.14  Aligned_cols=243  Identities=28%  Similarity=0.466  Sum_probs=210.5

Q ss_pred             ccCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecC----------cchHHHHHHHh---CCceEEEEecCCCHH
Q 024145            8 APFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQ----------DKLGEDLADKL---GQDVCYIHCDISNED   74 (272)
Q Consensus         8 ~~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~----------~~~~~~~~~~~---~~~~~~~~~D~~~~~   74 (272)
                      ..|.+++||++|||||++|||++++++|+++|++|++++|+          .+..++..+++   +.++.++.+|++|.+
T Consensus        20 ~~m~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~   99 (322)
T 3qlj_A           20 GSMGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWD   99 (322)
T ss_dssp             --CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHH
T ss_pred             chhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHH
Confidence            34677999999999999999999999999999999999987          55555555544   568999999999999


Q ss_pred             HHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCC------CCceEEEE
Q 024145           75 EVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQ------QKGCILFT  148 (272)
Q Consensus        75 ~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~------~~g~iv~i  148 (272)
                      +++++++++.+++|++|+||||||+...  .++.+.+.++|++++++|+.+++.+++++.++|.+.      ..|+||++
T Consensus       100 ~v~~~~~~~~~~~g~iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~i  177 (322)
T 3qlj_A          100 QAAGLIQTAVETFGGLDVLVNNAGIVRD--RMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINT  177 (322)
T ss_dssp             HHHHHHHHHHHHHSCCCEEECCCCCCCC--CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEE
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEE
Confidence            9999999999999999999999998765  678899999999999999999999999999998743      24899999


Q ss_pred             ecccccccCCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCCh
Q 024145          149 ASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKT  228 (272)
Q Consensus       149 ss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (272)
                      ||..+..+.++...|++||+|+++|+++++.|++++||+||+|+|| +.|++.......  ....    ... ..++.+|
T Consensus       178 sS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~--~~~~----~~~-~~~~~~p  249 (322)
T 3qlj_A          178 SSGAGLQGSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAE--MMAT----QDQ-DFDAMAP  249 (322)
T ss_dssp             CCHHHHHCBTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC---------------CCTTCG
T ss_pred             cCHHHccCCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhh--hhhc----ccc-ccCCCCH
Confidence            9999999999999999999999999999999999999999999999 999987643211  1111    111 1356799


Q ss_pred             HhHHHHHHHHhcCCCCCccccEEEecCceeec
Q 024145          229 DGIANAALYLASDESSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       229 ~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~  260 (272)
                      +|+|++++||+++++.+++|++|.+|||....
T Consensus       250 edva~~v~~L~s~~~~~itG~~i~vdGG~~~~  281 (322)
T 3qlj_A          250 ENVSPLVVWLGSAEARDVTGKVFEVEGGKIRV  281 (322)
T ss_dssp             GGTHHHHHHHTSGGGGGCCSCEEEEETTEEEE
T ss_pred             HHHHHHHHHHhCccccCCCCCEEEECCCcccc
Confidence            99999999999999999999999999999874

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=100.00  E-value=1.2e-45  Score=311.25  Aligned_cols=235  Identities=20%  Similarity=0.253  Sum_probs=193.6

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+..+++.+++   +.++.++.+|++|+++++++++++.++ 
T Consensus         3 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-   81 (252)
T 3h7a_A            3 LTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH-   81 (252)
T ss_dssp             --CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh-
Confidence            3578999999999999999999999999999999999998888777665   668999999999999999999999999 


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhH
Q 024145           88 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISK  167 (272)
Q Consensus        88 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK  167 (272)
                      +++|+||||||+...  .++.+.+.++|++++++|+.+++.++++++|+|.+++.|+||++||..+..+.++...|++||
T Consensus        82 g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  159 (252)
T 3h7a_A           82 APLEVTIFNVGANVN--FPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGGSGFAAFASAK  159 (252)
T ss_dssp             SCEEEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCCTTCHHHHHHH
T ss_pred             CCceEEEECCCcCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCCCCCccHHHHH
Confidence            999999999998765  778899999999999999999999999999999988889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCcEE-EEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCc
Q 024145          168 YGILGLVKCLAAELGQYGIRV-NCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYV  246 (272)
Q Consensus       168 ~a~~~~~~~la~e~~~~gi~v-~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  246 (272)
                      +|+++|+++++.|++++||+| |+|+||+++|++.+..   .....+......+. + +.+|||+|++++||++++.+.+
T Consensus       160 aa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~---~~~~~~~~~~~~~~-~-~~~pedvA~~~~~l~s~~~~~~  234 (252)
T 3h7a_A          160 FGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRER---REQMFGKDALANPD-L-LMPPAAVAGAYWQLYQQPKSAW  234 (252)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEEC--------------------------------CCHHHHHHHHHHHHHCCGGGB
T ss_pred             HHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhcc---chhhhhhhhhcCCc-c-CCCHHHHHHHHHHHHhCchhcc
Confidence            999999999999999999999 9999999999998742   11111122222233 4 8999999999999999888888


Q ss_pred             cccEEEe
Q 024145          247 SGQNLVV  253 (272)
Q Consensus       247 ~G~~i~~  253 (272)
                      +|+....
T Consensus       235 ~~~i~~~  241 (252)
T 3h7a_A          235 TFEMEIR  241 (252)
T ss_dssp             CSEEEEB
T ss_pred             eeeEEee
Confidence            8887543

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=100.00  E-value=1.1e-45  Score=311.70  Aligned_cols=241  Identities=28%  Similarity=0.384  Sum_probs=209.9

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEe-ecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGAKVVIA-DVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~~V~~~-~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      ++||++|||||++|||++++++|+++|++|+++ .|+.+..++..+++   +.++.++.+|+++.++++++++++.++++
T Consensus         5 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   84 (255)
T 3icc_A            5 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ   84 (255)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhc
Confidence            689999999999999999999999999999886 56666665555443   56889999999999999999999888764


Q ss_pred             ------CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCch
Q 024145           89 ------KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPA  162 (272)
Q Consensus        89 ------~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  162 (272)
                            ++|+||||||+...  .++.+.+.++|++++++|+.+++.++++++|+|.  +.|+||++||..+..+.+....
T Consensus        85 ~~~~~~~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~--~~~~iv~isS~~~~~~~~~~~~  160 (255)
T 3icc_A           85 NRTGSTKFDILINNAGIGPG--AFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLR--DNSRIINISSAATRISLPDFIA  160 (255)
T ss_dssp             HHHSSSCEEEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEE--EEEEEEEECCGGGTSCCTTBHH
T ss_pred             ccccCCcccEEEECCCCCCC--CChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhC--CCCEEEEeCChhhccCCCCcch
Confidence                  49999999998655  6788899999999999999999999999999994  4589999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCC
Q 024145          163 YTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDE  242 (272)
Q Consensus       163 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  242 (272)
                      |++||+|+++|+++++.|++++||+||+|+||+++|++....... +..........++ +++.+|+|+|++++||++++
T Consensus       161 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~s~~  238 (255)
T 3icc_A          161 YSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSD-PMMKQYATTISAF-NRLGEVEDIADTAAFLASPD  238 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTS-HHHHHHHHHTSTT-SSCBCHHHHHHHHHHHHSGG
T ss_pred             hHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhccc-HHHHHhhhccCCc-CCCCCHHHHHHHHHHHhCcc
Confidence            999999999999999999999999999999999999998753322 2223333444444 88999999999999999999


Q ss_pred             CCCccccEEEecCceee
Q 024145          243 SSYVSGQNLVVDGGFSV  259 (272)
Q Consensus       243 ~~~~~G~~i~~dgG~~~  259 (272)
                      +.+++|++|.+|||.++
T Consensus       239 ~~~~tG~~i~vdgG~~l  255 (255)
T 3icc_A          239 SRWVTGQLIDVSGGSCL  255 (255)
T ss_dssp             GTTCCSCEEEESSSTTC
T ss_pred             cCCccCCEEEecCCeeC
Confidence            99999999999999753

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=5e-46  Score=313.31  Aligned_cols=233  Identities=24%  Similarity=0.350  Sum_probs=201.0

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh-----C-CceEEEEecCCCHHHHHHHHHHHHH
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL-----G-QDVCYIHCDISNEDEVINLVDTAVS   85 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~-~~~~~~~~D~~~~~~~~~~~~~~~~   85 (272)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+..++..+++     + .++.++.+|++|.++++++++++.+
T Consensus         4 ~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   83 (250)
T 3nyw_A            4 EKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQ   83 (250)
T ss_dssp             -CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999988877776654     3 5789999999999999999999999


Q ss_pred             HhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhh
Q 024145           86 KFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTI  165 (272)
Q Consensus        86 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~  165 (272)
                      +++++|+||||||+...  .++ +.+.++|++++++|+.+++.++++++|+|.+++.|+||++||..+..+.+....|++
T Consensus        84 ~~g~iD~lvnnAg~~~~--~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  160 (250)
T 3nyw_A           84 KYGAVDILVNAAAMFMD--GSL-SEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFADGGIYGS  160 (250)
T ss_dssp             HHCCEEEEEECCCCCCC--CCC-SCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-------CCTTHHHH
T ss_pred             hcCCCCEEEECCCcCCC--CCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCCCCCcchHH
Confidence            99999999999998765  555 778999999999999999999999999998888899999999999987777899999


Q ss_pred             hHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCC-CC
Q 024145          166 SKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDE-SS  244 (272)
Q Consensus       166 sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~-~~  244 (272)
                      ||+|+++|+++++.|++++||+||+|+||+++|++.....           ...+. +++.+|||+|++++||+++. ..
T Consensus       161 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~-----------~~~~~-~~~~~p~dva~~v~~l~s~~~~~  228 (250)
T 3nyw_A          161 TKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMAKKAG-----------TPFKD-EEMIQPDDLLNTIRCLLNLSENV  228 (250)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHTT-----------CCSCG-GGSBCHHHHHHHHHHHHTSCTTE
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchhhhcC-----------CCccc-ccCCCHHHHHHHHHHHHcCCCce
Confidence            9999999999999999999999999999999999865211           11222 67899999999999999864 55


Q ss_pred             CccccEEEecCceee
Q 024145          245 YVSGQNLVVDGGFSV  259 (272)
Q Consensus       245 ~~~G~~i~~dgG~~~  259 (272)
                      +++|.+|++|||...
T Consensus       229 ~~~~~~i~vd~~~~~  243 (250)
T 3nyw_A          229 CIKDIVFEMKKSIIE  243 (250)
T ss_dssp             ECCEEEEEEHHHHHC
T ss_pred             EeeEEEEEeeccccc
Confidence            688888999999765

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=5.9e-46  Score=312.07  Aligned_cols=240  Identities=31%  Similarity=0.512  Sum_probs=204.3

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      .+++||++|||||++|||++++++|+++|++|++++|+++..+++. ++. ++.++.+|++|+++++    ++.++++++
T Consensus         2 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~~-~~~~~~~D~~~~~~~~----~~~~~~~~i   75 (246)
T 2ag5_A            2 GRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KYP-GIQTRVLDVTKKKQID----QFANEVERL   75 (246)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GST-TEEEEECCTTCHHHHH----HHHHHCSCC
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hcc-CceEEEeeCCCHHHHH----HHHHHhCCC
Confidence            4578999999999999999999999999999999999877665544 332 6889999999999987    445567899


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCC-CCchhhhhHHH
Q 024145           91 DIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGL-GSPAYTISKYG  169 (272)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~-~~~~Y~~sK~a  169 (272)
                      |+||||||....  .++.+.+.++|++.+++|+.+++.++++++|+|.+++.|+||++||..+..+.+ +...|++||++
T Consensus        76 d~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~~sK~a  153 (246)
T 2ag5_A           76 DVLFNVAGFVHH--GTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAA  153 (246)
T ss_dssp             SEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHHHHH
T ss_pred             CEEEECCccCCC--CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCCCCCccHHHHHHH
Confidence            999999998765  667889999999999999999999999999999877789999999999888877 88899999999


Q ss_pred             HHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCC---CChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCc
Q 024145          170 ILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGG---VDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYV  246 (272)
Q Consensus       170 ~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  246 (272)
                      ++.++++++.|++++||++|+|+||+++|++.....   ...+...+.+....+. +++.+|||+|++++||+++++.++
T Consensus       154 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dvA~~v~~l~s~~~~~~  232 (246)
T 2ag5_A          154 VIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKT-GRFATAEEIAMLCVYLASDESAYV  232 (246)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTT-SSCEEHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcCCC-CCCCCHHHHHHHHHHHhCccccCC
Confidence            999999999999999999999999999999854200   0112222222223344 788999999999999999999999


Q ss_pred             cccEEEecCceee
Q 024145          247 SGQNLVVDGGFSV  259 (272)
Q Consensus       247 ~G~~i~~dgG~~~  259 (272)
                      +|++|.+|||+.+
T Consensus       233 tG~~i~vdgG~~~  245 (246)
T 2ag5_A          233 TGNPVIIDGGWSL  245 (246)
T ss_dssp             CSCEEEECTTGGG
T ss_pred             CCCEEEECCCccC
Confidence            9999999999753

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=100.00  E-value=4e-45  Score=309.60  Aligned_cols=245  Identities=24%  Similarity=0.321  Sum_probs=208.9

Q ss_pred             CCCCcEEEEeCCC--ChHHHHHHHHHHHcCCeEEEeecCcc---hHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHH
Q 024145           12 RLEGKVAIITGGA--SGIGAMAVELFHENGAKVVIADVQDK---LGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus        12 ~l~~k~vlItGas--~giG~aia~~la~~G~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (272)
                      ++++|++|||||+  +|||++++++|+++|++|++++|+++   ..+++.++.+ .+.++.+|++|+++++++++++.++
T Consensus         5 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~   83 (261)
T 2wyu_A            5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALG-GALLFRADVTQDEELDALFAGVKEA   83 (261)
T ss_dssp             CCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTT-CCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC-CcEEEECCCCCHHHHHHHHHHHHHH
Confidence            5789999999999  99999999999999999999999875   2233333333 4789999999999999999999999


Q ss_pred             hCCccEEEeCCCCCCCC--CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhh
Q 024145           87 FGKLDIMYNNAGILDRS--FGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYT  164 (272)
Q Consensus        87 ~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~  164 (272)
                      ++++|+||||||.....  ..++.+.+.++|++.+++|+.+++.++++++|+|.+  .|+||++||..+..+.+....|+
T Consensus        84 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~  161 (261)
T 2wyu_A           84 FGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE--GGGIVTLTYYASEKVVPKYNVMA  161 (261)
T ss_dssp             HSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEEECGGGTSBCTTCHHHH
T ss_pred             cCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhcc--CCEEEEEecccccCCCCCchHHH
Confidence            99999999999976420  145778899999999999999999999999999964  58999999999999989999999


Q ss_pred             hhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCC
Q 024145          165 ISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESS  244 (272)
Q Consensus       165 ~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  244 (272)
                      +||++++.|+++++.|++++||+||+|+||+++|++..... ..+...+.+....++ +++.+|||+|++++||+++.+.
T Consensus       162 asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~p~-~~~~~~~dva~~v~~l~s~~~~  239 (261)
T 2wyu_A          162 IAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIP-GFTKMYDRVAQTAPL-RRNITQEEVGNLGLFLLSPLAS  239 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCT-THHHHHHHHHHHSTT-SSCCCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhcc-ccHHHHHHHHhcCCC-CCCCCHHHHHHHHHHHcChhhc
Confidence            99999999999999999999999999999999999875321 112222223333444 7889999999999999999889


Q ss_pred             CccccEEEecCceeecc
Q 024145          245 YVSGQNLVVDGGFSVVN  261 (272)
Q Consensus       245 ~~~G~~i~~dgG~~~~~  261 (272)
                      +++|++|.+|||..+..
T Consensus       240 ~~tG~~~~vdgG~~~~~  256 (261)
T 2wyu_A          240 GITGEVVYVDAGYHIMG  256 (261)
T ss_dssp             TCCSCEEEESTTGGGBC
T ss_pred             CCCCCEEEECCCccccC
Confidence            99999999999987654

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=100.00  E-value=5e-45  Score=311.31  Aligned_cols=244  Identities=23%  Similarity=0.253  Sum_probs=208.9

Q ss_pred             CCCCCcEEEEeCCC--ChHHHHHHHHHHHcCCeEEEeecCcc---hHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHH
Q 024145           11 KRLEGKVAIITGGA--SGIGAMAVELFHENGAKVVIADVQDK---LGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVS   85 (272)
Q Consensus        11 ~~l~~k~vlItGas--~giG~aia~~la~~G~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (272)
                      .+++||++|||||+  +|||++++++|+++|++|++++|+.+   ..+++.+..+ .+.++.+|++|+++++++++++.+
T Consensus         2 ~~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~   80 (275)
T 2pd4_A            2 GFLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELN-SPYVYELDVSKEEHFKSLYNSVKK   80 (275)
T ss_dssp             CTTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTT-CCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CcEEEEcCCCCHHHHHHHHHHHHH
Confidence            35789999999999  99999999999999999999999876   2233333333 478999999999999999999999


Q ss_pred             HhCCccEEEeCCCCCCCC--CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchh
Q 024145           86 KFGKLDIMYNNAGILDRS--FGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAY  163 (272)
Q Consensus        86 ~~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y  163 (272)
                      +++++|+||||||+....  ..++.+.+.++|++.+++|+.+++.++++++|+|.+  .|+||++||..+..+.+....|
T Consensus        81 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y  158 (275)
T 2pd4_A           81 DLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN--GASVLTLSYLGSTKYMAHYNVM  158 (275)
T ss_dssp             HTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCTTCHHH
T ss_pred             HcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEEecchhcCCCCCchhh
Confidence            999999999999986431  145778899999999999999999999999999964  5899999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCC
Q 024145          164 TISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDES  243 (272)
Q Consensus       164 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  243 (272)
                      ++||+|+++|+++++.|++++||+||+|+||+++|++..... ..+...+.+....++ +++.+|+|+|++++||+++.+
T Consensus       159 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~p~-~~~~~p~dva~~~~~l~s~~~  236 (275)
T 2pd4_A          159 GLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIA-DFRMILKWNEINAPL-RKNVSLEEVGNAGMYLLSSLS  236 (275)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGST-THHHHHHHHHHHSTT-SSCCCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhcc-ccHHHHHHHHhcCCc-CCCCCHHHHHHHHHHHhCccc
Confidence            999999999999999999999999999999999999876321 112222222233444 788999999999999999988


Q ss_pred             CCccccEEEecCceee
Q 024145          244 SYVSGQNLVVDGGFSV  259 (272)
Q Consensus       244 ~~~~G~~i~~dgG~~~  259 (272)
                      .+++|++|.+|||...
T Consensus       237 ~~~tG~~~~vdgg~~~  252 (275)
T 2pd4_A          237 SGVSGEVHFVDAGYHV  252 (275)
T ss_dssp             TTCCSCEEEESTTGGG
T ss_pred             cCCCCCEEEECCCccc
Confidence            9999999999999876

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=100.00  E-value=1.2e-44  Score=310.56  Aligned_cols=245  Identities=22%  Similarity=0.335  Sum_probs=208.3

Q ss_pred             CCCCcEEEEeCCC--ChHHHHHHHHHHHcCCeEEEeecCcc---hHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHH
Q 024145           12 RLEGKVAIITGGA--SGIGAMAVELFHENGAKVVIADVQDK---LGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus        12 ~l~~k~vlItGas--~giG~aia~~la~~G~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (272)
                      +++||++|||||+  +|||++++++|+++|++|++++|+.+   ..+++.+..+ .+.++.+|++|+++++++++++.++
T Consensus        18 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~   96 (285)
T 2p91_A           18 LLEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFG-SDLVVKCDVSLDEDIKNLKKFLEEN   96 (285)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTT-CCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC-CeEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4899999999999  99999999999999999999999875   2222323333 4788999999999999999999999


Q ss_pred             hCCccEEEeCCCCCCCC--CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhh
Q 024145           87 FGKLDIMYNNAGILDRS--FGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYT  164 (272)
Q Consensus        87 ~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~  164 (272)
                      +|++|+||||||+....  ..++.+.+.++|++.+++|+.+++.++++++|+|.++ .|+||++||..+..+.+....|+
T Consensus        97 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~  175 (285)
T 2p91_A           97 WGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGR-NGAIVTLSYYGAEKVVPHYNVMG  175 (285)
T ss_dssp             TSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTS-CCEEEEEECGGGTSBCTTTTHHH
T ss_pred             cCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCEEEEEccchhccCCCCccHHH
Confidence            99999999999986431  1456788999999999999999999999999999753 69999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCC
Q 024145          165 ISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESS  244 (272)
Q Consensus       165 ~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  244 (272)
                      +||+|+++|+++++.|++++||+||+|+||+++|++..... ......+......++ +++.+|+|+|++++||+++.+.
T Consensus       176 ~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~p~-~~~~~~~dva~~~~~l~s~~~~  253 (285)
T 2p91_A          176 IAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSIT-GFHLLMEHTTKVNPF-GKPITIEDVGDTAVFLCSDWAR  253 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CT-THHHHHHHHHHHSTT-SSCCCHHHHHHHHHHHTSGGGT
T ss_pred             HHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhccc-chHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHcCCccc
Confidence            99999999999999999999999999999999999865321 112222223333444 7889999999999999999889


Q ss_pred             CccccEEEecCceeec
Q 024145          245 YVSGQNLVVDGGFSVV  260 (272)
Q Consensus       245 ~~~G~~i~~dgG~~~~  260 (272)
                      +++|++|.+|||....
T Consensus       254 ~~tG~~~~vdgg~~~~  269 (285)
T 2p91_A          254 AITGEVVHVDNGYHIM  269 (285)
T ss_dssp             TCCSCEEEESTTGGGB
T ss_pred             CCCCCEEEECCCcccc
Confidence            9999999999998765

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.7e-45  Score=311.11  Aligned_cols=239  Identities=22%  Similarity=0.300  Sum_probs=200.3

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKFGK   89 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (272)
                      +++|++|||||++|||++++++|+++|++|++++|+.+..+++.+++   +.++.++.+|++|+++++++++++.+++|+
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   81 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGR   81 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            47899999999999999999999999999999999988887776665   568999999999999999999999999999


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHH
Q 024145           90 LDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYG  169 (272)
Q Consensus        90 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a  169 (272)
                      +|+||||||+...  .++.+.+.++|++++++|+.+++.++++++|+|.+++.|+||++||..+..+.++...|++||+|
T Consensus        82 iD~lVnnAG~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaa  159 (264)
T 3tfo_A           82 IDVLVNNAGVMPL--SPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFA  159 (264)
T ss_dssp             CCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHH
T ss_pred             CCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccCCCChhHHHHHHH
Confidence            9999999998765  77889999999999999999999999999999988888999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCcccc
Q 024145          170 ILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQ  249 (272)
Q Consensus       170 ~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  249 (272)
                      +++|+++++.|+ + ||+||+|+||+++|++......  ........   .......+|||+|++++||+++...+++|+
T Consensus       160 l~~l~~~la~e~-~-gIrvn~v~PG~v~T~~~~~~~~--~~~~~~~~---~~~~~~~~pedvA~~v~~l~s~~~~~~~~~  232 (264)
T 3tfo_A          160 VRAISDGLRQES-T-NIRVTCVNPGVVESELAGTITH--EETMAAMD---TYRAIALQPADIARAVRQVIEAPQSVDTTE  232 (264)
T ss_dssp             HHHHHHHHHHHC-S-SEEEEEEEECCC----------------------------CCCHHHHHHHHHHHHHSCTTEEEEE
T ss_pred             HHHHHHHHHHhC-C-CCEEEEEecCCCcCcccccccc--hhHHHHHH---hhhccCCCHHHHHHHHHHHhcCCccCccce
Confidence            999999999998 5 9999999999999999764211  11111111   111335799999999999999999999999


Q ss_pred             EEEecCceeec
Q 024145          250 NLVVDGGFSVV  260 (272)
Q Consensus       250 ~i~~dgG~~~~  260 (272)
                      .+..++|..+.
T Consensus       233 i~i~p~~~~~~  243 (264)
T 3tfo_A          233 ITIRPTASGNA  243 (264)
T ss_dssp             EEEEECC----
T ss_pred             EEEecCccccc
Confidence            99999987653

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=100.00  E-value=9.9e-45  Score=307.34  Aligned_cols=244  Identities=28%  Similarity=0.432  Sum_probs=209.5

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGK   89 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (272)
                      .+++++|++|||||++|||++++++|+++|++|++++|+.+..++..++++.++.++.+|++|+++++++++++.+++++
T Consensus         7 ~~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   86 (265)
T 2o23_A            7 CRSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGR   86 (265)
T ss_dssp             -CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             ccCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCC
Confidence            45689999999999999999999999999999999999988888888888888999999999999999999999999999


Q ss_pred             ccEEEeCCCCCCCCCCCCC------CCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCC------CCceEEEEecccccccC
Q 024145           90 LDIMYNNAGILDRSFGSIL------DTPKSDLERLINVNTIGGFLGAKHAARVMVPQ------QKGCILFTASACTEIAG  157 (272)
Q Consensus        90 id~lv~~ag~~~~~~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~------~~g~iv~iss~~~~~~~  157 (272)
                      +|+||||||....  .++.      +.+.++|++.+++|+.+++.+++++.++|.++      +.++||++||..+..+.
T Consensus        87 id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~  164 (265)
T 2o23_A           87 VDVAVNCAGIAVA--SKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQ  164 (265)
T ss_dssp             CCEEEECCCCCCC--CCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC
T ss_pred             CCEEEECCccCCC--CccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCCC
Confidence            9999999998654  3333      37899999999999999999999999999877      67999999999999999


Q ss_pred             CCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHH
Q 024145          158 LGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALY  237 (272)
Q Consensus       158 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  237 (272)
                      ++...|++||++++.+++.++.|++++||++++|+||+++|++....   ++..........+..+++.+|+|+|+.+++
T Consensus       165 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  241 (265)
T 2o23_A          165 VGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSL---PEKVCNFLASQVPFPSRLGDPAEYAHLVQA  241 (265)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-------------CHHHHTCSSSCSCBCHHHHHHHHHH
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCcccccc---CHHHHHHHHHcCCCcCCCCCHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999987631   121112222233333788999999999999


Q ss_pred             HhcCCCCCccccEEEecCceeec
Q 024145          238 LASDESSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       238 l~s~~~~~~~G~~i~~dgG~~~~  260 (272)
                      +++  +.+++|++|.+|||+.+.
T Consensus       242 l~~--~~~~~G~~i~vdgG~~~~  262 (265)
T 2o23_A          242 IIE--NPFLNGEVIRLDGAIRMQ  262 (265)
T ss_dssp             HHH--CTTCCSCEEEESTTCCCC
T ss_pred             Hhh--cCccCceEEEECCCEecC
Confidence            995  478999999999998764

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=100.00  E-value=5.5e-45  Score=312.61  Aligned_cols=246  Identities=26%  Similarity=0.416  Sum_probs=213.1

Q ss_pred             CccCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHH
Q 024145            7 AAPFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTA   83 (272)
Q Consensus         7 ~~~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~   83 (272)
                      ...+.++++|++|||||++|||++++++|+++|++|++++|+++..+++.+++   +.++.++.+|++|.++++++++++
T Consensus        36 ~~~~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~  115 (285)
T 2c07_A           36 ENYYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKI  115 (285)
T ss_dssp             CCCCCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccccccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHH
Confidence            33467789999999999999999999999999999999998887776666554   567899999999999999999999


Q ss_pred             HHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchh
Q 024145           84 VSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAY  163 (272)
Q Consensus        84 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y  163 (272)
                      .+.++++|+||||||....  .++.+.+.+++++.+++|+.+++.+++.+++.|.+++.++||++||..+..+.++...|
T Consensus       116 ~~~~~~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y  193 (285)
T 2c07_A          116 LTEHKNVDILVNNAGITRD--NLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANY  193 (285)
T ss_dssp             HHHCSCCCEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHH
T ss_pred             HHhcCCCCEEEECCCCCCC--CchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCCchH
Confidence            9999999999999998754  67888999999999999999999999999999987778999999999998888999999


Q ss_pred             hhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCC
Q 024145          164 TISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDES  243 (272)
Q Consensus       164 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  243 (272)
                      ++||++++.++++++.|+.+.||++++|+||+++|++...   ..+...+......+. +++.+|+|+|+++++++++++
T Consensus       194 ~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---~~~~~~~~~~~~~~~-~~~~~~~dvA~~~~~l~~~~~  269 (285)
T 2c07_A          194 SSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDK---ISEQIKKNIISNIPA-GRMGTPEEVANLACFLSSDKS  269 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC--------CCHHHHHHHHTTCTT-SSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhh---cCHHHHHHHHhhCCC-CCCCCHHHHHHHHHHHhCCCc
Confidence            9999999999999999999999999999999999998763   122222222233344 788999999999999999888


Q ss_pred             CCccccEEEecCcee
Q 024145          244 SYVSGQNLVVDGGFS  258 (272)
Q Consensus       244 ~~~~G~~i~~dgG~~  258 (272)
                      .+++|++|.+|||..
T Consensus       270 ~~~~G~~i~v~gG~~  284 (285)
T 2c07_A          270 GYINGRVFVIDGGLS  284 (285)
T ss_dssp             TTCCSCEEEESTTSC
T ss_pred             CCCCCCEEEeCCCcc
Confidence            999999999999975

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=100.00  E-value=2.5e-45  Score=307.01  Aligned_cols=234  Identities=31%  Similarity=0.472  Sum_probs=204.5

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEE
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMY   94 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv   94 (272)
                      +|++|||||++|||++++++|+++|++|++++|+.+.   ..++++  +.++.+|+++ ++++++++++.++++++|+||
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~---~~~~~~--~~~~~~D~~~-~~~~~~~~~~~~~~g~id~lv   75 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE---AAQSLG--AVPLPTDLEK-DDPKGLVKRALEALGGLHVLV   75 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH---HHHHHT--CEEEECCTTT-SCHHHHHHHHHHHHTSCCEEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHhhC--cEEEecCCch-HHHHHHHHHHHHHcCCCCEEE
Confidence            6899999999999999999999999999999998765   334443  7889999999 999999999999999999999


Q ss_pred             eCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccC--CCCchhhhhHHHHHH
Q 024145           95 NNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAG--LGSPAYTISKYGILG  172 (272)
Q Consensus        95 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~--~~~~~Y~~sK~a~~~  172 (272)
                      ||||....  .++.+.+.++|++.+++|+.+++.++++++|+|.+++.|+||++||..+..+.  +....|++||++++.
T Consensus        76 ~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sK~a~~~  153 (239)
T 2ekp_A           76 HAAAVNVR--KPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLG  153 (239)
T ss_dssp             ECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTSCCHHHHHHHHHHHH
T ss_pred             ECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCCCCCCccHHHHHHHHHH
Confidence            99998754  67888999999999999999999999999999988778999999999988877  888999999999999


Q ss_pred             HHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccccEEE
Q 024145          173 LVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLV  252 (272)
Q Consensus       173 ~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~  252 (272)
                      |+++++.|++++||++|+|+||+++|++.......++ ..+......++ +++.+|+|+|++++||+++++.+++|++|.
T Consensus       154 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~-~~~~~~~~~p~-~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~  231 (239)
T 2ekp_A          154 LTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQNPE-LYEPITARIPM-GRWARPEEIARVAAVLCGDEAEYLTGQAVA  231 (239)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHH-HHHHHHTTCTT-SSCBCHHHHHHHHHHHTSGGGTTCCSCEEE
T ss_pred             HHHHHHHHhhhcCcEEEEEEeCCccCchhhccccCHH-HHHHHHhcCCC-CCCcCHHHHHHHHHHHcCchhcCCCCCEEE
Confidence            9999999999999999999999999998652111112 22222233344 788999999999999999988999999999


Q ss_pred             ecCcee
Q 024145          253 VDGGFS  258 (272)
Q Consensus       253 ~dgG~~  258 (272)
                      +|||..
T Consensus       232 vdgG~~  237 (239)
T 2ekp_A          232 VDGGFL  237 (239)
T ss_dssp             ESTTTT
T ss_pred             ECCCcc
Confidence            999964

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=100.00  E-value=1.4e-44  Score=304.06  Aligned_cols=244  Identities=32%  Similarity=0.459  Sum_probs=214.2

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhC--CceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLG--QDVCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      .++++|++|||||++|||++++++|+++|++|++++|+++..++..+++.  .++.++.+|++|+++++++++++.++++
T Consensus         2 ~~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (251)
T 1zk4_A            2 NRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFG   81 (251)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            35789999999999999999999999999999999999887777766664  4789999999999999999999999999


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCC-ceEEEEecccccccCCCCchhhhhH
Q 024145           89 KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQK-GCILFTASACTEIAGLGSPAYTISK  167 (272)
Q Consensus        89 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-g~iv~iss~~~~~~~~~~~~Y~~sK  167 (272)
                      ++|+||||||....  .++.+.+.++|++.+++|+.+++.+++.+++.|.+++. ++||++||..+..+.+....|++||
T Consensus        82 ~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  159 (251)
T 1zk4_A           82 PVSTLVNNAGIAVN--KSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASK  159 (251)
T ss_dssp             SCCEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCCEEEECCCCCCC--CChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCCCCCccchHHH
Confidence            99999999998754  67788999999999999999999999999999988766 8999999999998889999999999


Q ss_pred             HHHHHHHHHHHHHhc--CCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCC
Q 024145          168 YGILGLVKCLAAELG--QYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSY  245 (272)
Q Consensus       168 ~a~~~~~~~la~e~~--~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  245 (272)
                      ++++.++++++.|+.  ++||++++|+||+++|++....  .............+. +++.+|+|+|+++++++++...+
T Consensus       160 ~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~~~~~~~  236 (251)
T 1zk4_A          160 GAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDL--PGAEEAMSQRTKTPM-GHIGEPNDIAYICVYLASNESKF  236 (251)
T ss_dssp             HHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTS--TTHHHHHTSTTTCTT-SSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhc--CchhhhHHHhhcCCC-CCCcCHHHHHHHHHHHcCccccc
Confidence            999999999999998  8899999999999999987632  111111112222233 78899999999999999988889


Q ss_pred             ccccEEEecCceee
Q 024145          246 VSGQNLVVDGGFSV  259 (272)
Q Consensus       246 ~~G~~i~~dgG~~~  259 (272)
                      ++|++|.+|||.++
T Consensus       237 ~~G~~~~v~gG~~~  250 (251)
T 1zk4_A          237 ATGSEFVVDGGYTA  250 (251)
T ss_dssp             CCSCEEEESTTGGG
T ss_pred             ccCcEEEECCCccC
Confidence            99999999999864

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=100.00  E-value=6.2e-45  Score=309.07  Aligned_cols=244  Identities=22%  Similarity=0.291  Sum_probs=206.6

Q ss_pred             CCCCcEEEEeCCC--ChHHHHHHHHHHHcCCeEEEeecCcc---hHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHH
Q 024145           12 RLEGKVAIITGGA--SGIGAMAVELFHENGAKVVIADVQDK---LGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus        12 ~l~~k~vlItGas--~giG~aia~~la~~G~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (272)
                      ++++|++|||||+  +|||++++++|+++|++|++++|++.   ..+++.+..+ ...++.+|++|+++++++++++.++
T Consensus         6 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~   84 (265)
T 1qsg_A            6 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLG-SDIVLQCDVAEDASIDTMFAELGKV   84 (265)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTT-CCCEEECCTTCHHHHHHHHHHHHTT
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcC-CcEEEEccCCCHHHHHHHHHHHHHH
Confidence            4789999999999  99999999999999999999999872   2223323333 3478999999999999999999999


Q ss_pred             hCCccEEEeCCCCCCCC--CCCCCC-CCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchh
Q 024145           87 FGKLDIMYNNAGILDRS--FGSILD-TPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAY  163 (272)
Q Consensus        87 ~g~id~lv~~ag~~~~~--~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y  163 (272)
                      ++++|+||||||.....  ..++.+ .+.++|++.+++|+.+++.++++++|+|.+  .|+||++||..+..+.+....|
T Consensus        85 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y  162 (265)
T 1qsg_A           85 WPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP--GSALLTLSYLGAERAIPNYNVM  162 (265)
T ss_dssp             CSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCTTTTHH
T ss_pred             cCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEEcchhhccCCCCchHH
Confidence            99999999999976421  134566 889999999999999999999999999964  5899999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCC
Q 024145          164 TISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDES  243 (272)
Q Consensus       164 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  243 (272)
                      ++||++++.|+++++.|++++||+||+|+||+++|++..... ..+...+......++ +++.+|||+|++++||+++.+
T Consensus       163 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~p~-~~~~~~~dva~~v~~l~s~~~  240 (265)
T 1qsg_A          163 GLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIK-DFRKMLAHCEAVTPI-RRTVTIEDVGNSAAFLCSDLS  240 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGST-THHHHHHHHHHHSTT-SSCCCHHHHHHHHHHHTSGGG
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhccc-ccHHHHHHHHhcCCC-CCCCCHHHHHHHHHHHhCchh
Confidence            999999999999999999999999999999999999876321 112222222233344 788999999999999999988


Q ss_pred             CCccccEEEecCceeec
Q 024145          244 SYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       244 ~~~~G~~i~~dgG~~~~  260 (272)
                      .+++|++|.+|||..+.
T Consensus       241 ~~~tG~~~~vdgG~~~~  257 (265)
T 1qsg_A          241 AGISGEVVHVDGGFSIA  257 (265)
T ss_dssp             TTCCSCEEEESTTGGGB
T ss_pred             cCccCCEEEECCCcCCC
Confidence            99999999999998765

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=100.00  E-value=2.3e-45  Score=312.02  Aligned_cols=242  Identities=19%  Similarity=0.265  Sum_probs=209.1

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      .++.+|++|||||++|||++++++|+++|++|++++|+.+..++.   ...++.++.+|++|.++++++++++.+++|++
T Consensus        12 ~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   88 (266)
T 3p19_A           12 RGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKAL---NLPNTLCAQVDVTDKYTFDTAITRAEKIYGPA   88 (266)
T ss_dssp             ---CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTT---CCTTEEEEECCTTCHHHHHHHHHHHHHHHCSE
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHh---hcCCceEEEecCCCHHHHHHHHHHHHHHCCCC
Confidence            347899999999999999999999999999999999987654332   23478899999999999999999999999999


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHH
Q 024145           91 DIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGI  170 (272)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~  170 (272)
                      |+||||||+...  .++.+.+.++|++++++|+.+++.++++++|+|.+++.|+||++||..+..+.++...|++||+|+
T Consensus        89 D~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asK~a~  166 (266)
T 3p19_A           89 DAIVNNAGMMLL--GQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKFAV  166 (266)
T ss_dssp             EEEEECCCCCCC--CCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred             CEEEECCCcCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCCCCCchHHHHHHHH
Confidence            999999998765  678899999999999999999999999999999888889999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhh-cCCCCCCCCChHhHHHHHHHHhcCCCCCcccc
Q 024145          171 LGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQ-MGNLKGEFLKTDGIANAALYLASDESSYVSGQ  249 (272)
Q Consensus       171 ~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  249 (272)
                      ++|+++++.|++++||+||+|+||+++|++.....  .......... ..++ +++.+|||+|++++|+++.....+.++
T Consensus       167 ~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~~~~-~r~~~pedvA~av~~l~~~~~~~~~~~  243 (266)
T 3p19_A          167 HAISENVREEVAASNVRVMTIAPSAVKTELLSHTT--SQQIKDGYDAWRVDM-GGVLAADDVARAVLFAYQQPQNVCIRE  243 (266)
T ss_dssp             HHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCS--CHHHHHHHHHHHHHT-TCCBCHHHHHHHHHHHHHSCTTEEEEE
T ss_pred             HHHHHHHHHHhcccCcEEEEEeeCccccchhhccc--chhhhHHHHhhcccc-cCCCCHHHHHHHHHHHHcCCCCcccee
Confidence            99999999999999999999999999999987432  1222222222 1233 789999999999999999988888888


Q ss_pred             EEEecCceeec
Q 024145          250 NLVVDGGFSVV  260 (272)
Q Consensus       250 ~i~~dgG~~~~  260 (272)
                      .+....+...-
T Consensus       244 i~i~p~~~~~~  254 (266)
T 3p19_A          244 IALAPTKQQPK  254 (266)
T ss_dssp             EEEEETTCCC-
T ss_pred             eEEecCCCCCc
Confidence            88777766543

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=100.00  E-value=6.3e-45  Score=319.86  Aligned_cols=234  Identities=28%  Similarity=0.344  Sum_probs=206.9

Q ss_pred             cCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcch-------HHHHH---HHhCCceEEEEecCCCHHHHHH
Q 024145            9 PFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKL-------GEDLA---DKLGQDVCYIHCDISNEDEVIN   78 (272)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~-------~~~~~---~~~~~~~~~~~~D~~~~~~~~~   78 (272)
                      .+.+++||++|||||++|||++++++|+++|++|++++|+.+.       .++..   +..+.++.++.+|++|++++++
T Consensus        39 ~~~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~  118 (346)
T 3kvo_A           39 NTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISA  118 (346)
T ss_dssp             CCSTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHH
T ss_pred             cCCCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHH
Confidence            4577899999999999999999999999999999999998764       22333   3346789999999999999999


Q ss_pred             HHHHHHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccccccc--
Q 024145           79 LVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIA--  156 (272)
Q Consensus        79 ~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~--  156 (272)
                      +++++.+++|++|+||||||+...  .++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||..+..+  
T Consensus       119 ~~~~~~~~~g~iDilVnnAG~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~~  196 (346)
T 3kvo_A          119 AVEKAIKKFGGIDILVNNASAISL--TNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVW  196 (346)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCC--CCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGGG
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCCC
Confidence            999999999999999999998765  7788999999999999999999999999999999888899999999998877  


Q ss_pred             CCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCc-ccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHH
Q 024145          157 GLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYG-LATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAA  235 (272)
Q Consensus       157 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  235 (272)
                      .+.+..|++||+|+++|+++++.|++ +||+||+|+||+ ++|++.+.           +....+ .+++.+|||+|+++
T Consensus       197 ~~~~~~Y~aSKaal~~l~~~la~e~~-~gIrvn~v~PG~~i~T~~~~~-----------~~~~~~-~~r~~~pedvA~~v  263 (346)
T 3kvo_A          197 FKQHCAYTIAKYGMSMYVLGMAEEFK-GEIAVNALWPKTAIHTAAMDM-----------LGGPGI-ESQCRKVDIIADAA  263 (346)
T ss_dssp             TSSSHHHHHHHHHHHHHHHHHHHHTT-TTCEEEEEECSBCBCCHHHHH-----------HCC--C-GGGCBCTHHHHHHH
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCccccHHHHh-----------hccccc-cccCCCHHHHHHHH
Confidence            78889999999999999999999999 899999999995 88877541           111112 26788999999999


Q ss_pred             HHHhcCCCCCccccEEEecCceee
Q 024145          236 LYLASDESSYVSGQNLVVDGGFSV  259 (272)
Q Consensus       236 ~~l~s~~~~~~~G~~i~~dgG~~~  259 (272)
                      +||+++ ..+++|++| +|||...
T Consensus       264 ~~L~s~-~~~itG~~i-vdgg~~~  285 (346)
T 3kvo_A          264 YSIFQK-PKSFTGNFV-IDENILK  285 (346)
T ss_dssp             HHHHTS-CTTCCSCEE-EHHHHHH
T ss_pred             HHHHhc-CCCCCceEE-ECCcEeh
Confidence            999999 899999998 9999654

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=100.00  E-value=7.1e-45  Score=309.86  Aligned_cols=240  Identities=30%  Similarity=0.412  Sum_probs=199.6

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEe-ecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIA-DVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKFGK   89 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~-~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (272)
                      ++|++|||||++|||++++++|+++|++|+++ .|+.+..+++.+++   +.++.++.+|++|.++++++++++.+++++
T Consensus        25 ~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  104 (272)
T 4e3z_A           25 DTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFGR  104 (272)
T ss_dssp             CSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            57999999999999999999999999999876 66666666555444   568999999999999999999999999999


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCC---CCceEEEEecccccccCC-CCchhhh
Q 024145           90 LDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQ---QKGCILFTASACTEIAGL-GSPAYTI  165 (272)
Q Consensus        90 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~~g~iv~iss~~~~~~~~-~~~~Y~~  165 (272)
                      +|+||||||+... ..++.+.+.++|++.+++|+.+++.+++.+++.|.+.   +.|+||++||..+..+.+ .+..|++
T Consensus       105 id~li~nAg~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~a  183 (272)
T 4e3z_A          105 LDGLVNNAGIVDY-PQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYAA  183 (272)
T ss_dssp             CCEEEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTTTCHHHHH
T ss_pred             CCEEEECCCCCCC-CCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCCCcchhHH
Confidence            9999999998654 2567889999999999999999999999999999763   578999999999888766 6678999


Q ss_pred             hHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCC
Q 024145          166 SKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSY  245 (272)
Q Consensus       166 sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  245 (272)
                      ||+|+++|+++++.|++++||++++|+||+++|++.....  ............+. +++.+|||+|++++||+++...+
T Consensus       184 sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~~~~-~~~~~~edvA~~i~~l~s~~~~~  260 (272)
T 4e3z_A          184 SKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGG--LPDRAREMAPSVPM-QRAGMPEEVADAILYLLSPSASY  260 (272)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC--------------------CCTT-SSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccC--ChHHHHHHhhcCCc-CCCcCHHHHHHHHHHHhCCcccc
Confidence            9999999999999999999999999999999999876311  11111222222333 78899999999999999999999


Q ss_pred             ccccEEEecCce
Q 024145          246 VSGQNLVVDGGF  257 (272)
Q Consensus       246 ~~G~~i~~dgG~  257 (272)
                      ++|++|.+|||.
T Consensus       261 ~tG~~i~vdgG~  272 (272)
T 4e3z_A          261 VTGSILNVSGGR  272 (272)
T ss_dssp             CCSCEEEESTTC
T ss_pred             ccCCEEeecCCC
Confidence            999999999995

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=100.00  E-value=1.1e-44  Score=304.19  Aligned_cols=232  Identities=26%  Similarity=0.395  Sum_probs=205.8

Q ss_pred             cCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---C-CceEEEEecC--CCHHHHHHHHHH
Q 024145            9 PFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---G-QDVCYIHCDI--SNEDEVINLVDT   82 (272)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~D~--~~~~~~~~~~~~   82 (272)
                      ...+++||++|||||++|||++++++|+++|++|++++|+++..++..+++   + .+..++.+|+  ++.+++++++++
T Consensus         8 ~~~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~   87 (247)
T 3i1j_A            8 HPELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAAR   87 (247)
T ss_dssp             CTTTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHH
T ss_pred             CCccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHH
Confidence            456689999999999999999999999999999999999988877776654   2 4677777777  999999999999


Q ss_pred             HHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCch
Q 024145           83 AVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPA  162 (272)
Q Consensus        83 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  162 (272)
                      +.++++++|+||||||..... .++.+.+.++|++.+++|+.+++.++++++|+|.+++.|+||++||..+..+.++...
T Consensus        88 ~~~~~g~id~lv~nAg~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~  166 (247)
T 3i1j_A           88 VEHEFGRLDGLLHNASIIGPR-TPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRANWGA  166 (247)
T ss_dssp             HHHHHSCCSEEEECCCCCCCC-SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCCTTCHH
T ss_pred             HHHhCCCCCEEEECCccCCCC-CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCCCCcch
Confidence            999999999999999986432 6788899999999999999999999999999999888899999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHHHhcC-CCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcC
Q 024145          163 YTISKYGILGLVKCLAAELGQ-YGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASD  241 (272)
Q Consensus       163 Y~~sK~a~~~~~~~la~e~~~-~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  241 (272)
                      |++||+|+++|+++++.|+.+ +||+||+|+||+++|++.....          .. .. ..++.+|+|+|+.++||+++
T Consensus       167 Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~~~~~----------~~-~~-~~~~~~p~dva~~~~~l~s~  234 (247)
T 3i1j_A          167 YGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGMRAQAY----------PD-EN-PLNNPAPEDIMPVYLYLMGP  234 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHHHHHS----------TT-SC-GGGSCCGGGGTHHHHHHHSG
T ss_pred             hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccchhcc----------cc-cC-ccCCCCHHHHHHHHHHHhCc
Confidence            999999999999999999977 8999999999999999864211          11 11 14567899999999999999


Q ss_pred             CCCCccccEEEe
Q 024145          242 ESSYVSGQNLVV  253 (272)
Q Consensus       242 ~~~~~~G~~i~~  253 (272)
                      +++++||++|.+
T Consensus       235 ~~~~itG~~i~~  246 (247)
T 3i1j_A          235 DSTGINGQALNA  246 (247)
T ss_dssp             GGTTCCSCEEEC
T ss_pred             hhccccCeeecC
Confidence            999999999986

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=100.00  E-value=5.3e-45  Score=310.65  Aligned_cols=236  Identities=24%  Similarity=0.290  Sum_probs=191.5

Q ss_pred             cCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145            9 PFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      +|.++++|++|||||++|||++++++|+++|++|++++|+.+..++..++++.++.++.+|++|+++++++++++.+++|
T Consensus        22 ~m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  101 (272)
T 4dyv_A           22 SMSKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFG  101 (272)
T ss_dssp             ------CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             hhcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            46678999999999999999999999999999999999999988888888888899999999999999999999999999


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCC--CceEEEEecccccccCCCCchhhhh
Q 024145           89 KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ--KGCILFTASACTEIAGLGSPAYTIS  166 (272)
Q Consensus        89 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~g~iv~iss~~~~~~~~~~~~Y~~s  166 (272)
                      ++|+||||||+..+ ..++.+.+.++|++.+++|+.+++.++++++|+|.+++  .|+||++||..+..+.++...|++|
T Consensus       102 ~iD~lVnnAg~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~as  180 (272)
T 4dyv_A          102 RVDVLFNNAGTGAP-AIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPYSAPYTAT  180 (272)
T ss_dssp             CCCEEEECCCCCCC-SSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCTTCHHHHHH
T ss_pred             CCCEEEECCCCCCC-CCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCCCchHHHHH
Confidence            99999999998643 25688899999999999999999999999999998765  6999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCc
Q 024145          167 KYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYV  246 (272)
Q Consensus       167 K~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  246 (272)
                      |+|+++|+++++.|++++||+||+|+||+++|++.+....   ...... ...+. +++.+|+|+|++++||++......
T Consensus       181 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~---~~~~~~-~~~~~-~~~~~pedvA~~v~fL~s~~~~~~  255 (272)
T 4dyv_A          181 KHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKA---GVPQAD-LSIKV-EPVMDVAHVASAVVYMASLPLDAN  255 (272)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEEEECC-----------------------------CHHHHHHHHHHHHHSCTTSC
T ss_pred             HHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhcc---cchhhh-hcccc-cCCCCHHHHHHHHHHHhCCCCcCc
Confidence            9999999999999999999999999999999999764211   111111 11223 678999999999999998665443


Q ss_pred             cccE
Q 024145          247 SGQN  250 (272)
Q Consensus       247 ~G~~  250 (272)
                      .++.
T Consensus       256 ~~~i  259 (272)
T 4dyv_A          256 VQFM  259 (272)
T ss_dssp             CCEE
T ss_pred             cceE
Confidence            3333

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=100.00  E-value=1.3e-44  Score=306.09  Aligned_cols=251  Identities=33%  Similarity=0.508  Sum_probs=215.5

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeec-CcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADV-QDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r-~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (272)
                      .++++|++|||||++|||++++++|+++|++|++++| +.+..+++.+++   +.++.++.+|++|+++++++++++.++
T Consensus         3 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (261)
T 1gee_A            3 KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKE   82 (261)
T ss_dssp             GGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999 666665555444   567899999999999999999999999


Q ss_pred             hCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCC-CceEEEEecccccccCCCCchhhh
Q 024145           87 FGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ-KGCILFTASACTEIAGLGSPAYTI  165 (272)
Q Consensus        87 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~Y~~  165 (272)
                      ++++|+||||||....  .++.+.+.++|++.+++|+.+++.+++++++.|.+++ .++||++||..+..+.++...|++
T Consensus        83 ~g~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  160 (261)
T 1gee_A           83 FGKLDVMINNAGLENP--VSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAA  160 (261)
T ss_dssp             HSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHH
T ss_pred             cCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCCCCccHHHH
Confidence            9999999999998754  5677889999999999999999999999999998766 799999999999989899999999


Q ss_pred             hHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCC
Q 024145          166 SKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSY  245 (272)
Q Consensus       166 sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  245 (272)
                      ||++++.+++.++.|++++||++++|+||+++|++.......++.. ..+....+. +++.+|+|+|+++++|+++...+
T Consensus       161 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~dva~~~~~l~~~~~~~  238 (261)
T 1gee_A          161 SKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQR-ADVESMIPM-GYIGEPEEIAAVAAWLASSEASY  238 (261)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHH-HHHHTTCTT-SSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcccChhHH-HHHHhcCCC-CCCcCHHHHHHHHHHHhCccccC
Confidence            9999999999999999999999999999999999865211011112 222222333 78899999999999999988889


Q ss_pred             ccccEEEecCceeeccCcccc
Q 024145          246 VSGQNLVVDGGFSVVNPTVMR  266 (272)
Q Consensus       246 ~~G~~i~~dgG~~~~~~~~~~  266 (272)
                      ++|++|.+|||..+. +.+..
T Consensus       239 ~~G~~~~v~gg~~~~-~~~~~  258 (261)
T 1gee_A          239 VTGITLFADGGMTLY-PSFQA  258 (261)
T ss_dssp             CCSCEEEESTTGGGC-GGGGG
T ss_pred             CCCcEEEEcCCcccC-CCCCC
Confidence            999999999998765 44443

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=100.00  E-value=1.2e-45  Score=309.74  Aligned_cols=233  Identities=27%  Similarity=0.397  Sum_probs=201.0

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHH-cCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHE-NGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   91 (272)
                      .++|++|||||++|||++++++|++ .|++|++++|+++..       ...+.++.+|++|+++++++++.+.  ++++|
T Consensus         2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~-------~~~~~~~~~Dv~~~~~v~~~~~~~~--~~~id   72 (244)
T 4e4y_A            2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS-------AENLKFIKADLTKQQDITNVLDIIK--NVSFD   72 (244)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCC-------CTTEEEEECCTTCHHHHHHHHHHTT--TCCEE
T ss_pred             CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccc-------cccceEEecCcCCHHHHHHHHHHHH--hCCCC
Confidence            4689999999999999999999999 788999999876521       2357899999999999999996554  67999


Q ss_pred             EEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHHH
Q 024145           92 IMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGIL  171 (272)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~  171 (272)
                      +||||||+...  .++.+.+.++|++++++|+.+++.+++++.|+|.++  |+||++||..+..+.++...|++||+|++
T Consensus        73 ~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~--g~iv~~sS~~~~~~~~~~~~Y~asKaa~~  148 (244)
T 4e4y_A           73 GIFLNAGILIK--GSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVG--ASIVFNGSDQCFIAKPNSFAYTLSKGAIA  148 (244)
T ss_dssp             EEEECCCCCCC--BCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEE--EEEEEECCGGGTCCCTTBHHHHHHHHHHH
T ss_pred             EEEECCccCCC--CCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccC--cEEEEECCHHHccCCCCCchhHHHHHHHH
Confidence            99999998765  678899999999999999999999999999999754  89999999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCC--------ChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCC
Q 024145          172 GLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGV--------DPALIESSMSQMGNLKGEFLKTDGIANAALYLASDES  243 (272)
Q Consensus       172 ~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  243 (272)
                      +|+++++.|++++||+||+|+||+++|++......        ..++..+......+. +++.+|||+|++++||+++++
T Consensus       149 ~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~p~dvA~~v~~l~s~~~  227 (244)
T 4e4y_A          149 QMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPL-NRIAQPQEIAELVIFLLSDKS  227 (244)
T ss_dssp             HHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTTSTT-SSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhcCCC-CCCcCHHHHHHHHHHHhcCcc
Confidence            99999999999999999999999999998652100        011122333333444 889999999999999999999


Q ss_pred             CCccccEEEecCceee
Q 024145          244 SYVSGQNLVVDGGFSV  259 (272)
Q Consensus       244 ~~~~G~~i~~dgG~~~  259 (272)
                      .+++|++|.+|||+++
T Consensus       228 ~~itG~~i~vdGG~~~  243 (244)
T 4e4y_A          228 KFMTGGLIPIDGGYTA  243 (244)
T ss_dssp             TTCCSCEEEESTTGGG
T ss_pred             ccccCCeEeECCCccC
Confidence            9999999999999875

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=100.00  E-value=1.2e-44  Score=307.18  Aligned_cols=247  Identities=28%  Similarity=0.368  Sum_probs=192.2

Q ss_pred             cCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHH
Q 024145            9 PFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVS   85 (272)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (272)
                      +.+++++|++|||||++|||++++++|+++|++|++++|+.+..++..+++   +.++.++.+|+++.++++++++++.+
T Consensus         8 ~~~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   87 (266)
T 1xq1_A            8 QRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSS   87 (266)
T ss_dssp             CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHH
Confidence            345689999999999999999999999999999999999987766665544   55789999999999999999999999


Q ss_pred             Hh-CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhh
Q 024145           86 KF-GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYT  164 (272)
Q Consensus        86 ~~-g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~  164 (272)
                      .+ +++|+||||||....  .++.+.+.++|++.+++|+.+++.++++++|+|.+++.++||++||..+..+.+....|+
T Consensus        88 ~~~~~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  165 (266)
T 1xq1_A           88 MFGGKLDILINNLGAIRS--KPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYS  165 (266)
T ss_dssp             HHTTCCSEEEEECCC--------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHH
T ss_pred             HhCCCCcEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCCCCCchHH
Confidence            98 899999999998654  667888999999999999999999999999999877789999999999988888899999


Q ss_pred             hhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCC
Q 024145          165 ISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESS  244 (272)
Q Consensus       165 ~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  244 (272)
                      +||++++.++++++.|++++||++++|+||+++|++.....  .+..........++ +++.+|+|+|+++++|+++++.
T Consensus       166 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~~~~~~  242 (266)
T 1xq1_A          166 ATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVY--DDEFKKVVISRKPL-GRFGEPEEVSSLVAFLCMPAAS  242 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC----------------------------CCGGGGHHHHHHHTSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhc--CHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHcCcccc
Confidence            99999999999999999999999999999999999876321  11111111122233 6789999999999999998889


Q ss_pred             CccccEEEecCceeec
Q 024145          245 YVSGQNLVVDGGFSVV  260 (272)
Q Consensus       245 ~~~G~~i~~dgG~~~~  260 (272)
                      +++|++|.+|||..+.
T Consensus       243 ~~~G~~~~v~gG~~~~  258 (266)
T 1xq1_A          243 YITGQTICVDGGLTVN  258 (266)
T ss_dssp             TCCSCEEECCCCEEET
T ss_pred             CccCcEEEEcCCcccc
Confidence            9999999999998764

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=100.00  E-value=1.4e-44  Score=306.32  Aligned_cols=246  Identities=27%  Similarity=0.380  Sum_probs=210.5

Q ss_pred             ccCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHH----hCCceEEEEecCCCHHHHHHHHHHH
Q 024145            8 APFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADK----LGQDVCYIHCDISNEDEVINLVDTA   83 (272)
Q Consensus         8 ~~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~   83 (272)
                      .+..++++|++|||||++|||++++++|+++|++|++++|+.+..++..++    .+.++.++.+|++|.++++++++++
T Consensus         7 ~~~~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   86 (265)
T 1h5q_A            7 GFTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQI   86 (265)
T ss_dssp             CEEECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCcccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHH
Confidence            345678999999999999999999999999999999999976655443333    3668999999999999999999999


Q ss_pred             HHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCC-CceEEEEecccccccCCC---
Q 024145           84 VSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ-KGCILFTASACTEIAGLG---  159 (272)
Q Consensus        84 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~---  159 (272)
                      .++++++|+||||||....  .++.+.+.+++++.+++|+.+++.+++++.++|.+++ .++||++||..+..+.+.   
T Consensus        87 ~~~~~~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~  164 (265)
T 1h5q_A           87 DADLGPISGLIANAGVSVV--KPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLN  164 (265)
T ss_dssp             HHHSCSEEEEEECCCCCCC--SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETT
T ss_pred             HHhcCCCCEEEECCCcCCC--CchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhcccccccc
Confidence            9999999999999998765  6678889999999999999999999999999997654 489999999887665432   


Q ss_pred             ----CchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHH
Q 024145          160 ----SPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAA  235 (272)
Q Consensus       160 ----~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  235 (272)
                          ...|++||++++.++++++.|++++||++++|+||+++|++....  . +..........+. +++.+|+|+|+++
T Consensus       165 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~-~~~~~~~~~~~~~-~~~~~~~dva~~~  240 (265)
T 1h5q_A          165 GSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHM--D-KKIRDHQASNIPL-NRFAQPEEMTGQA  240 (265)
T ss_dssp             EECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS--C-HHHHHHHHHTCTT-SSCBCGGGGHHHH
T ss_pred             ccccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccccccc--c-hhHHHHHHhcCcc-cCCCCHHHHHHHH
Confidence                678999999999999999999999999999999999999987632  2 2222223333344 7889999999999


Q ss_pred             HHHhcCCCCCccccEEEecCceee
Q 024145          236 LYLASDESSYVSGQNLVVDGGFSV  259 (272)
Q Consensus       236 ~~l~s~~~~~~~G~~i~~dgG~~~  259 (272)
                      ++++++++.+++|+.|.+|||..+
T Consensus       241 ~~l~~~~~~~~~G~~~~v~gG~~~  264 (265)
T 1h5q_A          241 ILLLSDHATYMTGGEYFIDGGQLI  264 (265)
T ss_dssp             HHHHSGGGTTCCSCEEEECTTGGG
T ss_pred             HhhccCchhcCcCcEEEecCCEeC
Confidence            999999889999999999999753

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=100.00  E-value=9.1e-45  Score=302.91  Aligned_cols=227  Identities=20%  Similarity=0.244  Sum_probs=194.2

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDI   92 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   92 (272)
                      |.+|++|||||++|||++++++|+++|++|++++|+.+..++..++++.++.++.+|++|+++++++++++.+++|++|+
T Consensus         1 Ms~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   80 (235)
T 3l6e_A            1 MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPEL   80 (235)
T ss_dssp             --CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcE
Confidence            35799999999999999999999999999999999998888888877767999999999999999999999999999999


Q ss_pred             EEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHHHH
Q 024145           93 MYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILG  172 (272)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~  172 (272)
                      ||||||....  .++.+.+.++|++++++|+.+++.++++++|+|.+++ ++||++||..+..+.++...|++||+|+++
T Consensus        81 lvnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~~~~~~~~Y~asKaa~~~  157 (235)
T 3l6e_A           81 VLHCAGTGEF--GPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG-GVLANVLSSAAQVGKANESLYCASKWGMRG  157 (235)
T ss_dssp             EEEECCCC--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-EEEEEECCEECCSSCSSHHHHHHHHHHHHH
T ss_pred             EEECCCCCCC--CChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEEeCHHhcCCCCCCcHHHHHHHHHHH
Confidence            9999998655  6788999999999999999999999999999998754 599999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhc-CCCCCccccEE
Q 024145          173 LVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLAS-DESSYVSGQNL  251 (272)
Q Consensus       173 ~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s-~~~~~~~G~~i  251 (272)
                      |+++++.|++++||++|+|+||+++|++.....   .         .+ ..++.+|||+|+.++++++ +...+++|-.+
T Consensus       158 ~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~---~---------~~-~~~~~~pedvA~~v~~l~~~~~~~~i~~i~~  224 (235)
T 3l6e_A          158 FLESLRAELKDSPLRLVNLYPSGIRSEFWDNTD---H---------VD-PSGFMTPEDAAAYMLDALEARSSCHVTDLFI  224 (235)
T ss_dssp             HHHHHHHHTTTSSEEEEEEEEEEECCCC------------------------CBCHHHHHHHHHHHTCCCSSEEEEEEEE
T ss_pred             HHHHHHHHhhccCCEEEEEeCCCccCcchhccC---C---------CC-CcCCCCHHHHHHHHHHHHhCCCCcceeeEEE
Confidence            999999999999999999999999999876311   0         11 2578999999999999998 56677777666


Q ss_pred             EecC
Q 024145          252 VVDG  255 (272)
Q Consensus       252 ~~dg  255 (272)
                      .-..
T Consensus       225 ~~~~  228 (235)
T 3l6e_A          225 GRNE  228 (235)
T ss_dssp             EECC
T ss_pred             ecCC
Confidence            5433

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=100.00  E-value=3.2e-44  Score=301.71  Aligned_cols=241  Identities=30%  Similarity=0.457  Sum_probs=211.0

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh----CCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL----GQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      +|++|||||++|||++++++|+++|++|++++|+++..++..+++    +.++.++.+|++|+++++++++++.++++++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAI   81 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            689999999999999999999999999999999988777766655    4578999999999999999999999999999


Q ss_pred             cEEEeCCCCCCCCCCC---CCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhH
Q 024145           91 DIMYNNAGILDRSFGS---ILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISK  167 (272)
Q Consensus        91 d~lv~~ag~~~~~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK  167 (272)
                      |+||||||....  .+   +.+.+.+++++.+++|+.+++.+++.+++.|.+++.++||++||..+..+.++...|++||
T Consensus        82 d~li~~Ag~~~~--~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  159 (250)
T 2cfc_A           82 DVLVNNAGITGN--SEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSK  159 (250)
T ss_dssp             CEEEECCCCCCC--TTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CEEEECCCCCCC--CCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCchhHHHHH
Confidence            999999998654  34   7788999999999999999999999999999877789999999999998889999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCcc
Q 024145          168 YGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVS  247 (272)
Q Consensus       168 ~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  247 (272)
                      ++++.++++++.|+.++||++++++||+++|++.......+ .....+....+. +++.+|+|+|++++++++++..+++
T Consensus       160 ~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~dva~~~~~l~~~~~~~~~  237 (250)
T 2cfc_A          160 GAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQP-ELRDQVLARIPQ-KEIGTAAQVADAVMFLAGEDATYVN  237 (250)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTSH-HHHHHHHTTCTT-CSCBCHHHHHHHHHHHHSTTCTTCC
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCCH-HHHHHHHhcCCC-CCCcCHHHHHHHHHHHcCchhhccc
Confidence            99999999999999999999999999999999865211111 122222223344 7889999999999999999889999


Q ss_pred             ccEEEecCceee
Q 024145          248 GQNLVVDGGFSV  259 (272)
Q Consensus       248 G~~i~~dgG~~~  259 (272)
                      |++|.+|||...
T Consensus       238 G~~~~v~gG~~~  249 (250)
T 2cfc_A          238 GAALVMDGAYTA  249 (250)
T ss_dssp             SCEEEESTTGGG
T ss_pred             CCEEEECCceec
Confidence            999999999753

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=100.00  E-value=6e-44  Score=300.08  Aligned_cols=234  Identities=26%  Similarity=0.384  Sum_probs=203.7

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      +++||++|||||++|||++++++|+++|++|++++|+.+..+++.+++   +.++.++.+|++|+++++++++++.++++
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g   83 (247)
T 2jah_A            4 ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALG   83 (247)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            478999999999999999999999999999999999988777666554   56789999999999999999999999999


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHH
Q 024145           89 KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKY  168 (272)
Q Consensus        89 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~  168 (272)
                      ++|+||||||....  .++.+.+.++|++++++|+.+++.++++++|+|.+++ |+||++||..+..+.++...|++||+
T Consensus        84 ~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~  160 (247)
T 2jah_A           84 GLDILVNNAGIMLL--GPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVNVRNAAVYQATKF  160 (247)
T ss_dssp             CCSEEEECCCCCCC--CCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCCCTTCHHHHHHHH
T ss_pred             CCCEEEECCCCCCC--CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCCCCCCcHHHHHHH
Confidence            99999999998754  6788999999999999999999999999999998766 99999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCC--CChHhHHHHHHHHhcCCCCCc
Q 024145          169 GILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEF--LKTDGIANAALYLASDESSYV  246 (272)
Q Consensus       169 a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~dva~~~~~l~s~~~~~~  246 (272)
                      |+++|+++++.|++++||+||+|+||+++|++.....  .+......... +  +++  .+|||+|++++|++++...++
T Consensus       161 a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~--~~~~~~~~~~~-~--~~~~~~~pedvA~~v~~l~s~~~~~~  235 (247)
T 2jah_A          161 GVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHIT--HTATKEMYEQR-I--SQIRKLQAQDIAEAVRYAVTAPHHAT  235 (247)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCC--CHHHHHHHHHH-T--TTSCCBCHHHHHHHHHHHHHSCTTEE
T ss_pred             HHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhccc--chhhHHHHHhc-c--cccCCCCHHHHHHHHHHHhCCCccCc
Confidence            9999999999999999999999999999999876321  12222222222 1  344  899999999999999888887


Q ss_pred             cccEEEec
Q 024145          247 SGQNLVVD  254 (272)
Q Consensus       247 ~G~~i~~d  254 (272)
                      +++. .++
T Consensus       236 ~~~i-~i~  242 (247)
T 2jah_A          236 VHEI-FIR  242 (247)
T ss_dssp             EEEE-EEE
T ss_pred             cceE-Eec
Confidence            7764 444

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=100.00  E-value=1.8e-44  Score=327.27  Aligned_cols=242  Identities=28%  Similarity=0.348  Sum_probs=207.6

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcc--hHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDK--LGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      ...++||++|||||++|||++++++|+++|++|++++|+..  ..++..++.  .+.++.+|++|.++++++++++.+++
T Consensus       208 ~~~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~--~~~~~~~Dvtd~~~v~~~~~~~~~~~  285 (454)
T 3u0b_A          208 DKPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKV--GGTALTLDVTADDAVDKITAHVTEHH  285 (454)
T ss_dssp             TSTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHH--TCEEEECCTTSTTHHHHHHHHHHHHS
T ss_pred             ccCCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHc--CCeEEEEecCCHHHHHHHHHHHHHHc
Confidence            34578999999999999999999999999999999998653  233333444  35689999999999999999999999


Q ss_pred             CC-ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhh
Q 024145           88 GK-LDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTIS  166 (272)
Q Consensus        88 g~-id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~s  166 (272)
                      ++ +|+||||||+...  ..+.+.+.++|++++++|+.+++++++++.+.|.+++.++||++||..+..+.+++..|++|
T Consensus       286 g~~id~lV~nAGv~~~--~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~g~~~Yaas  363 (454)
T 3u0b_A          286 GGKVDILVNNAGITRD--KLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYATT  363 (454)
T ss_dssp             TTCCSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCTTCHHHHHH
T ss_pred             CCCceEEEECCcccCC--CccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCCCCHHHHHH
Confidence            76 9999999998766  77889999999999999999999999999999988889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCc
Q 024145          167 KYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYV  246 (272)
Q Consensus       167 K~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  246 (272)
                      |+++++|+++++.|++++||+||+|+||+++|+|....   +....+......++ +++.+|+|++++++||+++.++++
T Consensus       364 Kaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~---~~~~~~~~~~~~~l-~r~g~pedvA~~v~fL~s~~a~~i  439 (454)
T 3u0b_A          364 KAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAI---PLATREVGRRLNSL-FQGGQPVDVAELIAYFASPASNAV  439 (454)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC-------------CHHHHHSBTT-SSCBCHHHHHHHHHHHHCGGGTTC
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhc---chhhHHHHHhhccc-cCCCCHHHHHHHHHHHhCCccCCC
Confidence            99999999999999999999999999999999997642   12222223333444 788999999999999999999999


Q ss_pred             cccEEEecCceee
Q 024145          247 SGQNLVVDGGFSV  259 (272)
Q Consensus       247 ~G~~i~~dgG~~~  259 (272)
                      ||++|.+|||..+
T Consensus       440 tG~~i~vdGG~~l  452 (454)
T 3u0b_A          440 TGNTIRVCGQAML  452 (454)
T ss_dssp             CSCEEEESSSBSC
T ss_pred             CCcEEEECCcccc
Confidence            9999999999865

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=100.00  E-value=2.4e-44  Score=303.13  Aligned_cols=244  Identities=32%  Similarity=0.464  Sum_probs=213.7

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCce-EEEEecCCCHHHHHHHHHHHHHHhC
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDV-CYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      ++++++|++|||||++|||++++++|+++|++|++++|+++..++..++++.++ .++.+|++|.++++++++++.+ ++
T Consensus         6 ~~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~   84 (254)
T 2wsb_A            6 VFRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEA-VA   84 (254)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHH-HS
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHh-hC
Confidence            456899999999999999999999999999999999999888777777776677 8999999999999999999988 89


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCC--chhhhh
Q 024145           89 KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGS--PAYTIS  166 (272)
Q Consensus        89 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~--~~Y~~s  166 (272)
                      ++|+||||||....  .++.+.+.+++++.+++|+.+++.+++.++|.|.+++.++||++||..+..+.+..  ..|++|
T Consensus        85 ~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~~s  162 (254)
T 2wsb_A           85 PVSILVNSAGIARL--HDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSYMAS  162 (254)
T ss_dssp             CCCEEEECCCCCCC--BCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCBHHHHHH
T ss_pred             CCcEEEECCccCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCCCCCcchHHHHH
Confidence            99999999998765  56788899999999999999999999999999988778999999999988887777  899999


Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCc
Q 024145          167 KYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYV  246 (272)
Q Consensus       167 K~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  246 (272)
                      |++++.++++++.|++++||++++|+||+++|++.......++..... ....+. +++.+|+|+|+++++++++...++
T Consensus       163 K~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~dva~~~~~l~~~~~~~~  240 (254)
T 2wsb_A          163 KGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRERPELFETW-LDMTPM-GRCGEPSEIAAAALFLASPAASYV  240 (254)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTCHHHHHHH-HHTSTT-SSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccccChHHHHHH-HhcCCC-CCCCCHHHHHHHHHHHhCcccccc
Confidence            999999999999999999999999999999999865211112222222 222333 788999999999999999888899


Q ss_pred             cccEEEecCcee
Q 024145          247 SGQNLVVDGGFS  258 (272)
Q Consensus       247 ~G~~i~~dgG~~  258 (272)
                      +|++|.+|||..
T Consensus       241 ~G~~~~v~gG~~  252 (254)
T 2wsb_A          241 TGAILAVDGGYT  252 (254)
T ss_dssp             CSCEEEESTTGG
T ss_pred             cCCEEEECCCEe
Confidence            999999999975

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=100.00  E-value=1.2e-44  Score=306.31  Aligned_cols=241  Identities=18%  Similarity=0.215  Sum_probs=204.9

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHH---cCCeEEEeecCcchHHHHHHHh-----CCceEEEEecCCCHHHHHHHHHH
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHE---NGAKVVIADVQDKLGEDLADKL-----GQDVCYIHCDISNEDEVINLVDT   82 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~---~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~   82 (272)
                      +++++|++|||||++|||++++++|++   +|++|++++|+.+..+++.+++     +.++.++.+|++|++++++++++
T Consensus         2 ~~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   81 (259)
T 1oaa_A            2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSA   81 (259)
T ss_dssp             CCCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHH
Confidence            457899999999999999999999999   8999999999988777766655     45789999999999999999999


Q ss_pred             HHH--HhCCcc--EEEeCCCCCCCCCCCCCC-CCHHHHHHHHHHHhHHHHHHHHHHHHhhcCC--CCceEEEEecccccc
Q 024145           83 AVS--KFGKLD--IMYNNAGILDRSFGSILD-TPKSDLERLINVNTIGGFLGAKHAARVMVPQ--QKGCILFTASACTEI  155 (272)
Q Consensus        83 ~~~--~~g~id--~lv~~ag~~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~g~iv~iss~~~~~  155 (272)
                      +.+  .+|++|  +||||||+......++.+ .+.++|++++++|+.+++.++++++|+|.++  +.|+||++||..+..
T Consensus        82 ~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~  161 (259)
T 1oaa_A           82 VRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ  161 (259)
T ss_dssp             HHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTS
T ss_pred             HHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcC
Confidence            988  678899  999999986432235666 7899999999999999999999999999876  679999999999999


Q ss_pred             cCCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCC--ChhHHHHHHhhcCCCCCCCCChHhHHH
Q 024145          156 AGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGV--DPALIESSMSQMGNLKGEFLKTDGIAN  233 (272)
Q Consensus       156 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~dva~  233 (272)
                      +.++...|++||+|+++|+++++.|+++  |+||+|+||+++|++......  ..+...+.+....+. +++.+|||+|+
T Consensus       162 ~~~~~~~Y~asKaa~~~~~~~la~e~~~--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~p~dvA~  238 (259)
T 1oaa_A          162 PYKGWGLYCAGKAARDMLYQVLAAEEPS--VRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSD-GALVDCGTSAQ  238 (259)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHCTT--EEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHT-TCSBCHHHHHH
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHhhCCC--ceEEEecCCCcCcchHHHHhhccCChhHHHHHHHhhhc-CCcCCHHHHHH
Confidence            9999999999999999999999999964  999999999999998652100  011122222222233 78899999999


Q ss_pred             HHHHHhcCCCCCccccEEEecC
Q 024145          234 AALYLASDESSYVSGQNLVVDG  255 (272)
Q Consensus       234 ~~~~l~s~~~~~~~G~~i~~dg  255 (272)
                      .++|++++ ..+++|++|.+||
T Consensus       239 ~v~~l~~~-~~~itG~~i~vdg  259 (259)
T 1oaa_A          239 KLLGLLQK-DTFQSGAHVDFYD  259 (259)
T ss_dssp             HHHHHHHH-CCSCTTEEEETTC
T ss_pred             HHHHHHhh-ccccCCcEEeccC
Confidence            99999985 6899999999986

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=100.00  E-value=1.3e-45  Score=322.62  Aligned_cols=244  Identities=18%  Similarity=0.233  Sum_probs=204.7

Q ss_pred             CCcEEEEeCCCC--hHHHHHHHHHHHcCCeEEEeecCc---------chHHHHHHHh---C---CceEEEEecCCCH--H
Q 024145           14 EGKVAIITGGAS--GIGAMAVELFHENGAKVVIADVQD---------KLGEDLADKL---G---QDVCYIHCDISNE--D   74 (272)
Q Consensus        14 ~~k~vlItGas~--giG~aia~~la~~G~~V~~~~r~~---------~~~~~~~~~~---~---~~~~~~~~D~~~~--~   74 (272)
                      ++|++|||||++  |||++++++|+++|++|++++|++         +..+...+..   +   ..+.++.+|+++.  +
T Consensus         1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~   80 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchh
Confidence            479999999986  999999999999999999877654         2111111111   1   2378889999887  7


Q ss_pred             ------------------HHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHh
Q 024145           75 ------------------EVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARV  136 (272)
Q Consensus        75 ------------------~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  136 (272)
                                        +++++++++.+++|++|+||||||+......++.+.+.++|++++++|+.+++.++++++|+
T Consensus        81 ~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~  160 (329)
T 3lt0_A           81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI  160 (329)
T ss_dssp             GCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             hhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence                              99999999999999999999999975433377889999999999999999999999999999


Q ss_pred             hcCCCCceEEEEecccccccCCCCc-hhhhhHHHHHHHHHHHHHHhcC-CCcEEEEEeCCcccCCcccCCCCChh-----
Q 024145          137 MVPQQKGCILFTASACTEIAGLGSP-AYTISKYGILGLVKCLAAELGQ-YGIRVNCVSPYGLATGMSMKGGVDPA-----  209 (272)
Q Consensus       137 ~~~~~~g~iv~iss~~~~~~~~~~~-~Y~~sK~a~~~~~~~la~e~~~-~gi~v~~i~Pg~v~t~~~~~~~~~~~-----  209 (272)
                      |.++  |+||++||..+..+.++.. .|++||+|+++|+++++.|+++ +||+||+|+||+++|+|.+.......     
T Consensus       161 m~~~--g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~  238 (329)
T 3lt0_A          161 MKPQ--SSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENN  238 (329)
T ss_dssp             EEEE--EEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHTCC---------
T ss_pred             HhhC--CeEEEEeCccccCCCCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeechhHhhhhhhccccccc
Confidence            9874  9999999999999999985 9999999999999999999998 89999999999999999764321000     


Q ss_pred             -------------------------------------HHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccccEEE
Q 024145          210 -------------------------------------LIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLV  252 (272)
Q Consensus       210 -------------------------------------~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~  252 (272)
                                                           +..+......++ +++.+|||+|++++||+|++++++||++|.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~peevA~~v~fL~s~~a~~itG~~i~  317 (329)
T 3lt0_A          239 TNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPL-RQKLLSTDIGSVASFLLSRESRAITGQTIY  317 (329)
T ss_dssp             ---------------------------------CHHHHHHHHHHHHSSS-CSCCCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             ccccccccccccchhhcccccchhhhhhhhcccchhHHHHHHHhhcCcc-cCcCCHHHHHHHHHHHhCchhccccCcEEE
Confidence                                                 012233344455 899999999999999999999999999999


Q ss_pred             ecCceeec
Q 024145          253 VDGGFSVV  260 (272)
Q Consensus       253 ~dgG~~~~  260 (272)
                      +|||.++.
T Consensus       318 vdGG~~~~  325 (329)
T 3lt0_A          318 VDNGLNIM  325 (329)
T ss_dssp             ESTTGGGC
T ss_pred             EcCCeeEE
Confidence            99999874

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=100.00  E-value=4.6e-44  Score=303.25  Aligned_cols=236  Identities=26%  Similarity=0.342  Sum_probs=203.4

Q ss_pred             cCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHH
Q 024145            9 PFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVS   85 (272)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (272)
                      +|.+++||++|||||++|||++++++|+++|++|++++|+.+..+++.+++   +.++.++.+|+++.++++++++++.+
T Consensus        23 ~m~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~  102 (262)
T 3rkr_A           23 HMSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLA  102 (262)
T ss_dssp             --CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             hhhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHH
Confidence            477799999999999999999999999999999999999988877766554   56899999999999999999999999


Q ss_pred             HhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhh
Q 024145           86 KFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTI  165 (272)
Q Consensus        86 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~  165 (272)
                      +++++|+||||||.... .+++.+.+.++|++.+++|+.+++.++++++|+|.+++.|+||++||..+..+.++...|++
T Consensus       103 ~~g~id~lv~~Ag~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  181 (262)
T 3rkr_A          103 AHGRCDVLVNNAGVGWF-GGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTA  181 (262)
T ss_dssp             HHSCCSEEEECCCCCCC-SSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCCTTCHHHHH
T ss_pred             hcCCCCEEEECCCccCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCchHHH
Confidence            99999999999998433 26788899999999999999999999999999998888899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCC
Q 024145          166 SKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSY  245 (272)
Q Consensus       166 sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  245 (272)
                      ||+|+++|+++++.|++++||++++|+||+++|++.....   .        ..+. .++.+|+|+|++++||+++....
T Consensus       182 sKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---~--------~~~~-~~~~~p~dvA~~v~~l~s~~~~~  249 (262)
T 3rkr_A          182 SKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLS---A--------KKSA-LGAIEPDDIADVVALLATQADQS  249 (262)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------------------------CCCHHHHHHHHHHHHTCCTTC
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCcccccc---c--------cccc-ccCCCHHHHHHHHHHHhcCcccc
Confidence            9999999999999999999999999999999999875311   0        1112 56789999999999999999999


Q ss_pred             ccccEEEecCce
Q 024145          246 VSGQNLVVDGGF  257 (272)
Q Consensus       246 ~~G~~i~~dgG~  257 (272)
                      ++|+.+..+.|.
T Consensus       250 ~~g~~~i~p~~~  261 (262)
T 3rkr_A          250 FISEVLVRPTLK  261 (262)
T ss_dssp             CEEEEEEECCCC
T ss_pred             ccCcEEeccccC
Confidence            999999887663

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=100.00  E-value=5.8e-44  Score=301.80  Aligned_cols=248  Identities=31%  Similarity=0.462  Sum_probs=213.6

Q ss_pred             ccCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHH
Q 024145            8 APFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAV   84 (272)
Q Consensus         8 ~~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~   84 (272)
                      ++.+++++|++|||||++|||++++++|+++|++|++++|+.+..++..+++   +.++.++.+|++|+++++++++++.
T Consensus         6 ~~~~~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (260)
T 3awd_A            6 MEKLRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVH   85 (260)
T ss_dssp             TGGGCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHH
Confidence            3446789999999999999999999999999999999999987766555544   5679999999999999999999999


Q ss_pred             HHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCC--ch
Q 024145           85 SKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGS--PA  162 (272)
Q Consensus        85 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~--~~  162 (272)
                      ++++++|+||||||.... ..++.+.+.+++++.+++|+.+++.+++++.++|.+++.++||++||..+..+.+..  ..
T Consensus        86 ~~~~~id~vi~~Ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~  164 (260)
T 3awd_A           86 EQEGRVDILVACAGICIS-EVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAA  164 (260)
T ss_dssp             HHHSCCCEEEECCCCCCC-SCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCCHH
T ss_pred             HHcCCCCEEEECCCCCCC-CCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccCCCCCccc
Confidence            999999999999998652 156788899999999999999999999999999987778999999999988877776  89


Q ss_pred             hhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCC
Q 024145          163 YTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDE  242 (272)
Q Consensus       163 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  242 (272)
                      |++||++++.++++++.|++++||++++|+||+++|++.......+....... ...+. +++.+|+|+|+++++++++.
T Consensus       165 Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~dva~~~~~l~~~~  242 (260)
T 3awd_A          165 YNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEKPELYDAWI-AGTPM-GRVGQPDEVASVVQFLASDA  242 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHTCHHHHHHHH-HTCTT-SSCBCHHHHHHHHHHHHSGG
T ss_pred             cHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccCChHHHHHHH-hcCCc-CCCCCHHHHHHHHHHHhCch
Confidence            99999999999999999999999999999999999998651111122222222 22333 78899999999999999988


Q ss_pred             CCCccccEEEecCcee
Q 024145          243 SSYVSGQNLVVDGGFS  258 (272)
Q Consensus       243 ~~~~~G~~i~~dgG~~  258 (272)
                      ..+++|++|.+|||..
T Consensus       243 ~~~~~G~~~~v~gg~~  258 (260)
T 3awd_A          243 ASLMTGAIVNVDAGFT  258 (260)
T ss_dssp             GTTCCSCEEEESTTTT
T ss_pred             hccCCCcEEEECCcee
Confidence            8899999999999964

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=100.00  E-value=4.7e-44  Score=305.64  Aligned_cols=245  Identities=26%  Similarity=0.399  Sum_probs=210.3

Q ss_pred             cCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHH---hCCceEEEEecCCCHHHHHHHHHHHHH
Q 024145            9 PFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADK---LGQDVCYIHCDISNEDEVINLVDTAVS   85 (272)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (272)
                      +++++++|++|||||++|||++++++|+++|++|++++|+.+..+++.+.   .+.++.++.+|++|.++++++++++.+
T Consensus        28 ~~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~  107 (279)
T 3ctm_A           28 DLFSLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEK  107 (279)
T ss_dssp             GGGCCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999999988766555443   366799999999999999999999999


Q ss_pred             HhCCccEEEeCCCCCCCCCCCCC-CCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccccccc--CCCCch
Q 024145           86 KFGKLDIMYNNAGILDRSFGSIL-DTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIA--GLGSPA  162 (272)
Q Consensus        86 ~~g~id~lv~~ag~~~~~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~--~~~~~~  162 (272)
                      +++++|+||||||..... .++. +.+.++|++.+++|+.+++.+++.+++.|.+++.++||++||..+..+  .+....
T Consensus       108 ~~g~id~li~~Ag~~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~  186 (279)
T 3ctm_A          108 DFGTIDVFVANAGVTWTQ-GPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQAP  186 (279)
T ss_dssp             HHSCCSEEEECGGGSTTC---CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC---CCHHH
T ss_pred             HhCCCCEEEECCcccccC-CcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCCCCCCccc
Confidence            999999999999976431 3455 778899999999999999999999999998777899999999998877  777889


Q ss_pred             hhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCC
Q 024145          163 YTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDE  242 (272)
Q Consensus       163 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  242 (272)
                      |++||++++.++++++.|++++| ++|+|+||+++|++...  ...+.... +....+. +++.+|+|+|+++++|++++
T Consensus       187 Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~--~~~~~~~~-~~~~~p~-~~~~~~~dvA~~~~~l~s~~  261 (279)
T 3ctm_A          187 YNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDF--ASKDMKAK-WWQLTPL-GREGLTQELVGGYLYLASNA  261 (279)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSS--CCHHHHHH-HHHHSTT-CSCBCGGGTHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCccccccc--cChHHHHH-HHHhCCc-cCCcCHHHHHHHHHHHhCcc
Confidence            99999999999999999999999 99999999999998752  12222222 2233344 78999999999999999998


Q ss_pred             CCCccccEEEecCceee
Q 024145          243 SSYVSGQNLVVDGGFSV  259 (272)
Q Consensus       243 ~~~~~G~~i~~dgG~~~  259 (272)
                      ..+++|++|.+|||..+
T Consensus       262 ~~~~tG~~i~vdgG~~~  278 (279)
T 3ctm_A          262 STFTTGSDVVIDGGYTC  278 (279)
T ss_dssp             GTTCCSCEEEESTTCCC
T ss_pred             ccCccCCEEEECCCeec
Confidence            89999999999999764

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=100.00  E-value=1.9e-44  Score=302.49  Aligned_cols=241  Identities=31%  Similarity=0.497  Sum_probs=190.0

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEe-ecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIA-DVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~-~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      ++++|++|||||++|||++++++|+++|++|+++ .|+++..++..+++   +.++.++.+|++|+++++++++++.+++
T Consensus         2 ~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (247)
T 2hq1_A            2 QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAF   81 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            4689999999999999999999999999999998 56666665555443   5679999999999999999999999999


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhH
Q 024145           88 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISK  167 (272)
Q Consensus        88 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK  167 (272)
                      +++|+||||||....  .++.+.+.+++++.+++|+.+++.+++++.+.|.+++.++||++||..+..+.+....|++||
T Consensus        82 ~~~d~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  159 (247)
T 2hq1_A           82 GRIDILVNNAGITRD--TLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAASK  159 (247)
T ss_dssp             SCCCEEEECC-----------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC---------CHHHHHHH
T ss_pred             CCCCEEEECCCCCCC--CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcHhHHHH
Confidence            999999999998654  567778889999999999999999999999999877789999999998888888999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCcc
Q 024145          168 YGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVS  247 (272)
Q Consensus       168 ~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  247 (272)
                      ++++.++++++.|++++||++++++||+++|++...   .++...+......+. +++.+|+|+|++++++++++..+++
T Consensus       160 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~~~~~~~~~  235 (247)
T 2hq1_A          160 AGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDV---LPDKVKEMYLNNIPL-KRFGTPEEVANVVGFLASDDSNYIT  235 (247)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT---SCHHHHHHHHTTSTT-SSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhh---cchHHHHHHHhhCCC-CCCCCHHHHHHHHHHHcCccccccc
Confidence            999999999999999999999999999999998653   122222222222333 7889999999999999998888999


Q ss_pred             ccEEEecCcee
Q 024145          248 GQNLVVDGGFS  258 (272)
Q Consensus       248 G~~i~~dgG~~  258 (272)
                      |++|.+|||.+
T Consensus       236 G~~~~v~gG~~  246 (247)
T 2hq1_A          236 GQVINIDGGLV  246 (247)
T ss_dssp             SCEEEESTTC-
T ss_pred             CcEEEeCCCcc
Confidence            99999999975

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=100.00  E-value=6.5e-44  Score=299.36  Aligned_cols=240  Identities=28%  Similarity=0.457  Sum_probs=211.7

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHH----hCCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADK----LGQDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      ++++|++|||||++|||++++++|+++|++|++++|+++..+++.++    .+.++.++.+|++|+++++++++++.+++
T Consensus         4 ~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (248)
T 2pnf_A            4 KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLV   83 (248)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence            57899999999999999999999999999999999988776655544    35678999999999999999999999999


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhH
Q 024145           88 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISK  167 (272)
Q Consensus        88 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK  167 (272)
                      +++|+||||||....  .++.+.+.+++++.+++|+.+++.+++.+++.|.+++.++||++||..+..+.++...|++||
T Consensus        84 ~~~d~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  161 (248)
T 2pnf_A           84 DGIDILVNNAGITRD--KLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTK  161 (248)
T ss_dssp             SCCSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred             CCCCEEEECCCCCCC--CccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCCCCCchHHHHH
Confidence            999999999998754  567788999999999999999999999999999877789999999998888888899999999


Q ss_pred             HHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCcc
Q 024145          168 YGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVS  247 (272)
Q Consensus       168 ~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  247 (272)
                      ++++.+++.++.|+.++||++++++||+++|++...   ..+..........+. +++.+|+|+|+++++++++...+++
T Consensus       162 ~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~---~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~~~~~~~~~  237 (248)
T 2pnf_A          162 AGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAV---LSEEIKQKYKEQIPL-GRFGSPEEVANVVLFLCSELASYIT  237 (248)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGG---SCHHHHHHHHHTCTT-SSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhh---ccHHHHHHHHhcCCC-CCccCHHHHHHHHHHHhCchhhcCC
Confidence            999999999999999999999999999999998763   122222222233343 7889999999999999998888999


Q ss_pred             ccEEEecCce
Q 024145          248 GQNLVVDGGF  257 (272)
Q Consensus       248 G~~i~~dgG~  257 (272)
                      |++|.+|||.
T Consensus       238 G~~~~v~gg~  247 (248)
T 2pnf_A          238 GEVIHVNGGM  247 (248)
T ss_dssp             SCEEEESTTC
T ss_pred             CcEEEeCCCc
Confidence            9999999996

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=100.00  E-value=4.1e-44  Score=303.36  Aligned_cols=243  Identities=29%  Similarity=0.487  Sum_probs=207.1

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhC----------CceEEEEecCCCHHHHHHHHH
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLG----------QDVCYIHCDISNEDEVINLVD   81 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~D~~~~~~~~~~~~   81 (272)
                      ++++|++|||||++|||++++++|+++|++|++++|+++..+++.+++.          .++.++.+|++|+++++++++
T Consensus         4 ~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   83 (264)
T 2pd6_A            4 RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLE   83 (264)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHH
Confidence            4789999999999999999999999999999999999887776665442          468899999999999999999


Q ss_pred             HHHHHhCCc-cEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCC-CceEEEEecccccccCCC
Q 024145           82 TAVSKFGKL-DIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ-KGCILFTASACTEIAGLG  159 (272)
Q Consensus        82 ~~~~~~g~i-d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~  159 (272)
                      .+.++++++ |+||||||....  .++.+.+.+++++.+++|+.+++.+++++.++|.+++ .|+||++||..+..+.++
T Consensus        84 ~~~~~~g~i~d~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  161 (264)
T 2pd6_A           84 QVQACFSRPPSVVVSCAGITQD--EFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVG  161 (264)
T ss_dssp             HHHHHHSSCCSEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCCTT
T ss_pred             HHHHHhCCCCeEEEECCCcCCC--cchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCCCC
Confidence            999999998 999999998754  5678889999999999999999999999999998765 789999999999888899


Q ss_pred             CchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHh
Q 024145          160 SPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLA  239 (272)
Q Consensus       160 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  239 (272)
                      ...|++||++++.+++.++.|++++||++++|+||+++|++....   .....+......+. +++.+|+|+|+++++++
T Consensus       162 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~  237 (264)
T 2pd6_A          162 QTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKV---PQKVVDKITEMIPM-GHLGDPEDVADVVAFLA  237 (264)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC-------------CTGGGCTT-CSCBCHHHHHHHHHHHH
T ss_pred             ChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhc---CHHHHHHHHHhCCC-CCCCCHHHHHHHHHHHc
Confidence            999999999999999999999999999999999999999986531   11111111222333 68899999999999999


Q ss_pred             cCCCCCccccEEEecCceeec
Q 024145          240 SDESSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       240 s~~~~~~~G~~i~~dgG~~~~  260 (272)
                      +++..+++|+.+.+|||..+.
T Consensus       238 ~~~~~~~~G~~~~v~gg~~~~  258 (264)
T 2pd6_A          238 SEDSGYITGTSVEVTGGLFMA  258 (264)
T ss_dssp             SGGGTTCCSCEEEESTTC---
T ss_pred             CCcccCCCCCEEEECCCceec
Confidence            988889999999999998764

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=100.00  E-value=5.8e-44  Score=299.06  Aligned_cols=238  Identities=29%  Similarity=0.476  Sum_probs=208.0

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCeEEEe-ecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGAKVVIA-DVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~~V~~~-~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      ||++|||||++|||++++++|+++|++|+++ +|+++..+++.+++   +.++.++.+|++|+++++++++++.++++++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTI   80 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            6899999999999999999999999999884 78776666554443   5678999999999999999999999999999


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHH
Q 024145           91 DIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGI  170 (272)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~  170 (272)
                      |+||||||....  .++.+.+.+++++.+++|+.+++.+++.+.++|.+++.++||++||..+..+.+....|++||+++
T Consensus        81 d~li~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  158 (244)
T 1edo_A           81 DVVVNNAGITRD--TLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGV  158 (244)
T ss_dssp             SEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHH
T ss_pred             CEEEECCCCCCC--cCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCCCCCccchhhHHHH
Confidence            999999998765  667888999999999999999999999999999877789999999999988889999999999999


Q ss_pred             HHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHh-cCCCCCcccc
Q 024145          171 LGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLA-SDESSYVSGQ  249 (272)
Q Consensus       171 ~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~-s~~~~~~~G~  249 (272)
                      +.+++.++.|+.++||++++++||+++|++....  . +..........+. +++.+|+|+|+++++++ ++...+++|+
T Consensus       159 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~-~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~~~~~~~~~~G~  234 (244)
T 1edo_A          159 IGFSKTAAREGASRNINVNVVCPGFIASDMTAKL--G-EDMEKKILGTIPL-GRTGQPENVAGLVEFLALSPAASYITGQ  234 (244)
T ss_dssp             HHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT--C-HHHHHHHHTSCTT-CSCBCHHHHHHHHHHHHHCSGGGGCCSC
T ss_pred             HHHHHHHHHHhhhcCCEEEEEeeCccccchhhhc--C-hHHHHHHhhcCCC-CCCCCHHHHHHHHHHHhCCCccCCcCCC
Confidence            9999999999999999999999999999987631  2 2222222233344 78899999999999998 6677889999


Q ss_pred             EEEecCcee
Q 024145          250 NLVVDGGFS  258 (272)
Q Consensus       250 ~i~~dgG~~  258 (272)
                      +|.+|||..
T Consensus       235 ~~~v~gG~~  243 (244)
T 1edo_A          235 AFTIDGGIA  243 (244)
T ss_dssp             EEEESTTTT
T ss_pred             EEEeCCCcc
Confidence            999999964

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=100.00  E-value=1.8e-43  Score=297.82  Aligned_cols=245  Identities=34%  Similarity=0.472  Sum_probs=213.8

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (272)
                      ..++++|++|||||+||||++++++|+++|++|++++|+.+..+++.+++   +.++.++.+|++|+++++++++++.++
T Consensus         6 ~~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   85 (255)
T 1fmc_A            6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISK   85 (255)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence            45689999999999999999999999999999999999987766655544   567899999999999999999999999


Q ss_pred             hCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhh
Q 024145           87 FGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTIS  166 (272)
Q Consensus        87 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~s  166 (272)
                      ++++|+||||||....  .++ +.+.+++++.+++|+.+++.++++++|+|.+++.++||++||..+..+.++...|++|
T Consensus        86 ~~~~d~vi~~Ag~~~~--~~~-~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  162 (255)
T 1fmc_A           86 LGKVDILVNNAGGGGP--KPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASS  162 (255)
T ss_dssp             HSSCCEEEECCCCCCC--CCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHH
T ss_pred             cCCCCEEEECCCCCCC--CCC-CCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCCcccHHH
Confidence            9999999999998654  444 7889999999999999999999999999987778999999999998888889999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCc
Q 024145          167 KYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYV  246 (272)
Q Consensus       167 K~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  246 (272)
                      |++++.+++.++.|++++||++++++||++.|++.... ..+....... ...+. +++.+|+|+|++++++++++..++
T Consensus       163 K~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~-~~~~~-~~~~~~~dva~~~~~l~~~~~~~~  239 (255)
T 1fmc_A          163 KAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSV-ITPEIEQKML-QHTPI-RRLGQPQDIANAALFLCSPAASWV  239 (255)
T ss_dssp             HHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT-CCHHHHHHHH-HTCSS-CSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhc-cChHHHHHHH-hcCCc-ccCCCHHHHHHHHHHHhCCccccC
Confidence            99999999999999999999999999999999987532 1222222222 23344 788999999999999999888889


Q ss_pred             cccEEEecCceeec
Q 024145          247 SGQNLVVDGGFSVV  260 (272)
Q Consensus       247 ~G~~i~~dgG~~~~  260 (272)
                      +|++|.+|||....
T Consensus       240 ~G~~~~v~gg~~~s  253 (255)
T 1fmc_A          240 SGQILTVSGGGVQE  253 (255)
T ss_dssp             CSCEEEESTTSCCC
T ss_pred             CCcEEEECCceecc
Confidence            99999999997654

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=100.00  E-value=2e-43  Score=305.02  Aligned_cols=252  Identities=26%  Similarity=0.340  Sum_probs=213.9

Q ss_pred             cCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh----CCceEEEEecCCCHHHHHHHHHHHH
Q 024145            9 PFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL----GQDVCYIHCDISNEDEVINLVDTAV   84 (272)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~   84 (272)
                      +..+++||++|||||++|||++++++|+++|++|++++|+.+..++..+++    +.++.++.+|++|.++++++++++.
T Consensus        20 ~~~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   99 (302)
T 1w6u_A           20 PPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELI   99 (302)
T ss_dssp             CTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CcccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHH
Confidence            345689999999999999999999999999999999999987776665554    6679999999999999999999999


Q ss_pred             HHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhc-CCCCceEEEEecccccccCCCCchh
Q 024145           85 SKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMV-PQQKGCILFTASACTEIAGLGSPAY  163 (272)
Q Consensus        85 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~g~iv~iss~~~~~~~~~~~~Y  163 (272)
                      ++++++|+||||||....  .++.+.+.+++++.+++|+.+++.++++++++|. +++.++||++||..+..+.++...|
T Consensus       100 ~~~g~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y  177 (302)
T 1w6u_A          100 KVAGHPNIVINNAAGNFI--SPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPS  177 (302)
T ss_dssp             HHTCSCSEEEECCCCCCC--SCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHH
T ss_pred             HHcCCCCEEEECCCCCCC--CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCCCCcchh
Confidence            999999999999998654  6677889999999999999999999999999997 4567899999999999888999999


Q ss_pred             hhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCC-cccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCC
Q 024145          164 TISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATG-MSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDE  242 (272)
Q Consensus       164 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  242 (272)
                      ++||++++.++++++.|++++||++++|+||+++|+ +..... .............+. +++.+|+|+|+++++++++.
T Consensus       178 ~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~~~~~~~~~~~~p~-~~~~~~~dva~~~~~l~~~~  255 (302)
T 1w6u_A          178 ASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLD-PTGTFEKEMIGRIPC-GRLGTVEELANLAAFLCSDY  255 (302)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CC-TTSHHHHHHHTTCTT-SSCBCHHHHHHHHHHHTSGG
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcc-cchhhHHHHHhcCCc-CCCCCHHHHHHHHHHHcCCc
Confidence            999999999999999999999999999999999998 433211 111111122223333 78899999999999999988


Q ss_pred             CCCccccEEEecCceeeccCcc
Q 024145          243 SSYVSGQNLVVDGGFSVVNPTV  264 (272)
Q Consensus       243 ~~~~~G~~i~~dgG~~~~~~~~  264 (272)
                      ..+++|++|.+|||..+....+
T Consensus       256 ~~~~~G~~~~v~gg~~~~~~~~  277 (302)
T 1w6u_A          256 ASWINGAVIKFDGGEEVLISGE  277 (302)
T ss_dssp             GTTCCSCEEEESTTHHHHHHST
T ss_pred             ccccCCCEEEECCCeeeccCCc
Confidence            8899999999999987754333

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=4e-44  Score=306.66  Aligned_cols=240  Identities=25%  Similarity=0.322  Sum_probs=195.8

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh----CCceEEEEecCCCHHHHHHHHHHHHH
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL----GQDVCYIHCDISNEDEVINLVDTAVS   85 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (272)
                      ..+++||++|||||++|||++++++|+++|++|++++|+.+..++..+++    +..+.++++|++|+++++++++++.+
T Consensus        28 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  107 (281)
T 4dry_A           28 KGSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRA  107 (281)
T ss_dssp             ------CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            35679999999999999999999999999999999999988777766655    33468999999999999999999999


Q ss_pred             HhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCC--CceEEEEecccccccCCCCchh
Q 024145           86 KFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ--KGCILFTASACTEIAGLGSPAY  163 (272)
Q Consensus        86 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~g~iv~iss~~~~~~~~~~~~Y  163 (272)
                      ++|++|+||||||.... ..++.+.+.++|++++++|+.+++.++++++|+|.+++  .|+||++||..+..+.++...|
T Consensus       108 ~~g~iD~lvnnAG~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y  186 (281)
T 4dry_A          108 EFARLDLLVNNAGSNVP-PVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAPY  186 (281)
T ss_dssp             HHSCCSEEEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCCTTCHHH
T ss_pred             HcCCCCEEEECCCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCCCCChhH
Confidence            99999999999998643 25788899999999999999999999999999998764  7999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCC
Q 024145          164 TISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDES  243 (272)
Q Consensus       164 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  243 (272)
                      ++||+|+++|+++++.|++++||+||+|+||+++|++.......   ..+.. ...+ .+++.+|||+|++++||++.+.
T Consensus       187 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~---~~~~~-~~~~-~~~~~~pedvA~~v~fL~s~~~  261 (281)
T 4dry_A          187 TATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMSTG---VLQAN-GEVA-AEPTIPIEHIAEAVVYMASLPL  261 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------CE---EECTT-SCEE-ECCCBCHHHHHHHHHHHHHSCT
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhcch---hhhhh-hccc-ccCCCCHHHHHHHHHHHhCCCc
Confidence            99999999999999999999999999999999999997632111   00111 1112 2678999999999999998654


Q ss_pred             -CCccccEEEecC
Q 024145          244 -SYVSGQNLVVDG  255 (272)
Q Consensus       244 -~~~~G~~i~~dg  255 (272)
                       ..+++.++.-..
T Consensus       262 ~~~i~~~~i~p~~  274 (281)
T 4dry_A          262 SANVLTMTVMATR  274 (281)
T ss_dssp             TEEEEEEEEEETT
T ss_pred             cCccccEEEEecc
Confidence             446665555544

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=100.00  E-value=9.1e-44  Score=299.16  Aligned_cols=236  Identities=19%  Similarity=0.235  Sum_probs=198.4

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEe
Q 024145           16 KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYN   95 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~   95 (272)
                      |++|||||++|||++++++|+++|++|++++|+.+..+++.++++.++.++.+|++|+++++++++++.++++++|+|||
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvn   80 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVN   80 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence            68999999999999999999999999999999988888888888778999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHHHHHHH
Q 024145           96 NAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVK  175 (272)
Q Consensus        96 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~~~  175 (272)
                      |||+... ..++.+.+.++|++.+++|+.+++.++++++|+|.+++.|+||++||..+..+.++...|++||+++++|++
T Consensus        81 nAg~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~  159 (248)
T 3asu_A           81 NAGLALG-MEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSL  159 (248)
T ss_dssp             CCCCCCC-CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCcCCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCCCCCchHHHHHHHHHHHHH
Confidence            9998632 156788999999999999999999999999999987778999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCcEEEEEeCCccc-CCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccccEEEec
Q 024145          176 CLAAELGQYGIRVNCVSPYGLA-TGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVD  254 (272)
Q Consensus       176 ~la~e~~~~gi~v~~i~Pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~d  254 (272)
                      +++.|++++||+||+|+||+++ |++..........   ........ ....+|||+|++++||+++ ..+++|+.+.++
T Consensus       160 ~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~~~~~---~~~~~~~~-~~~~~p~dvA~~v~~l~s~-~~~~~g~~i~v~  234 (248)
T 3asu_A          160 NLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDG---KAEKTYQN-TVALTPEDVSEAVWWVSTL-PAHVNINTLEMM  234 (248)
T ss_dssp             HHHHHTTTSCCEEEEEEECSBCC--------------------------CCBCHHHHHHHHHHHHHS-CTTCCCCEEEEC
T ss_pred             HHHHHhhhcCcEEEEEeccccccCcchhhcccCchH---HHHHHHhc-cCCCCHHHHHHHHHHHhcC-CccceeeEEEEc
Confidence            9999999999999999999999 9986421110110   00110011 2346999999999999986 478999999999


Q ss_pred             Cce
Q 024145          255 GGF  257 (272)
Q Consensus       255 gG~  257 (272)
                      ++.
T Consensus       235 ~~~  237 (248)
T 3asu_A          235 PVT  237 (248)
T ss_dssp             CTT
T ss_pred             ccc
Confidence            874

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=100.00  E-value=3e-44  Score=301.32  Aligned_cols=236  Identities=18%  Similarity=0.198  Sum_probs=200.3

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCeEEEe-e--cCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGAKVVIA-D--VQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~~V~~~-~--r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   91 (272)
                      ||++|||||++|||++++++|+++|++|+++ +  |+++..+++.+++ ..     .|+.|.++++++++++.++++++|
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~-~~-----~~~~~~~~v~~~~~~~~~~~g~iD   74 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN-PG-----TIALAEQKPERLVDATLQHGEAID   74 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS-TT-----EEECCCCCGGGHHHHHGGGSSCEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh-CC-----CcccCHHHHHHHHHHHHHHcCCCC
Confidence            5899999999999999999999999999999 6  9888777776665 22     233477888889999999999999


Q ss_pred             EEEeCCCCCCCC-CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHH
Q 024145           92 IMYNNAGILDRS-FGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGI  170 (272)
Q Consensus        92 ~lv~~ag~~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~  170 (272)
                      +||||||..... ..++.+.+.++|++.+++|+.+++.++++++|+|.+++.|+||++||..+..+.++...|++||+|+
T Consensus        75 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~  154 (244)
T 1zmo_A           75 TIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPLAYNPLYGPARAAT  154 (244)
T ss_dssp             EEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTCTTHHHHHHHH
T ss_pred             EEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCCCCchHHHHHHHHH
Confidence            999999976430 0467889999999999999999999999999999887889999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCCcEEEEEeCCcccCCcc---cCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCcc
Q 024145          171 LGLVKCLAAELGQYGIRVNCVSPYGLATGMS---MKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVS  247 (272)
Q Consensus       171 ~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  247 (272)
                      ++|+++++.|++++||+||+|+||+++|++.   .... ..+..........++ +++.+|||+|++++||+++.+.+++
T Consensus       155 ~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~-~~~~~~~~~~~~~p~-~r~~~pe~vA~~v~~l~s~~~~~~t  232 (244)
T 1zmo_A          155 VALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWE-NNPELRERVDRDVPL-GRLGRPDEMGALITFLASRRAAPIV  232 (244)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHH-HCHHHHHHHHHHCTT-CSCBCHHHHHHHHHHHHTTTTGGGT
T ss_pred             HHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccccccc-chHHHHHHHhcCCCC-CCCcCHHHHHHHHHHHcCccccCcc
Confidence            9999999999999999999999999999987   3210 011112222213344 7889999999999999999999999


Q ss_pred             ccEEEecCcee
Q 024145          248 GQNLVVDGGFS  258 (272)
Q Consensus       248 G~~i~~dgG~~  258 (272)
                      |++|.+|||..
T Consensus       233 G~~i~vdgG~~  243 (244)
T 1zmo_A          233 GQFFAFTGGYL  243 (244)
T ss_dssp             TCEEEESTTCC
T ss_pred             CCEEEeCCCCC
Confidence            99999999963

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=9.9e-44  Score=302.80  Aligned_cols=243  Identities=18%  Similarity=0.197  Sum_probs=199.9

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCC--ceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQ--DVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      ..+++ |++|||||++|||++++++|+++|++|++++|+.+..+++.+++..  ++.++.+|++|+++++++++++.+++
T Consensus        17 ~~~~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   95 (272)
T 2nwq_A           17 GSHMS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEF   95 (272)
T ss_dssp             ----C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGG
T ss_pred             CCCcC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            45677 9999999999999999999999999999999998888777776653  78999999999999999999999999


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCc-eEEEEecccccccCCCCchhhhh
Q 024145           88 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKG-CILFTASACTEIAGLGSPAYTIS  166 (272)
Q Consensus        88 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g-~iv~iss~~~~~~~~~~~~Y~~s  166 (272)
                      +++|+||||||+... ..++.+.+.++|++++++|+.+++.+++.++|.|.+++.| +||++||..+..+.++...|++|
T Consensus        96 g~iD~lvnnAG~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~~~~~~Y~as  174 (272)
T 2nwq_A           96 ATLRGLINNAGLALG-TDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGT  174 (272)
T ss_dssp             SSCCEEEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             CCCCEEEECCCCCCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCCCCCchHHHH
Confidence            999999999998642 1567889999999999999999999999999999877778 99999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCc
Q 024145          167 KYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYV  246 (272)
Q Consensus       167 K~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  246 (272)
                      |+++++|+++++.|++++||+||+|+||+++|++..........   ........ ....+|||+|++++||+++ ..++
T Consensus       175 Kaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~---~~~~~~~~-~~~~~pedvA~~v~~l~s~-~~~~  249 (272)
T 2nwq_A          175 KAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGGDQA---RYDKTYAG-AHPIQPEDIAETIFWIMNQ-PAHL  249 (272)
T ss_dssp             HHHHHHHHHHHHTTCTTSCCEEEEEEECSBC-----------------------C-CCCBCHHHHHHHHHHHHTS-CTTE
T ss_pred             HHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcccccchH---HHHHhhcc-CCCCCHHHHHHHHHHHhCC-CccC
Confidence            99999999999999999999999999999999986521110110   01111111 2347999999999999986 5789


Q ss_pred             cccEEEecCceee
Q 024145          247 SGQNLVVDGGFSV  259 (272)
Q Consensus       247 ~G~~i~~dgG~~~  259 (272)
                      +|+.|.+++|...
T Consensus       250 ~g~~i~v~~~~~~  262 (272)
T 2nwq_A          250 NINSLEIMPVSQS  262 (272)
T ss_dssp             EEEEEEEEETTEE
T ss_pred             ccceEEEeeccCc
Confidence            9999999998543

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=100.00  E-value=4.7e-43  Score=292.24  Aligned_cols=228  Identities=23%  Similarity=0.286  Sum_probs=202.4

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh----CCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL----GQDVCYIHCDISNEDEVINLVDTAVSKFGK   89 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (272)
                      ++|++|||||++|||++++++|+++|++|++++|+.+..++..+++    +.++.++++|++|+++++++++++.+++++
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   80 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGD   80 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence            4789999999999999999999999999999999988776665443    678999999999999999999999999999


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHH
Q 024145           90 LDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYG  169 (272)
Q Consensus        90 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a  169 (272)
                      +|+||||||+...  .++.+.+.++|++.+++|+.+++.++++++|+|. ++.+++|+++|..+..+.+....|++||+|
T Consensus        81 id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~~~ii~~sS~~~~~~~~~~~~Y~~sKaa  157 (235)
T 3l77_A           81 VDVVVANAGLGYF--KRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLK-RTGGLALVTTSDVSARLIPYGGGYVSTKWA  157 (235)
T ss_dssp             CSEEEECCCCCCC--CCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEECCGGGSSCCTTCHHHHHHHHH
T ss_pred             CCEEEECCccccc--cCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCcEEEEecchhcccCCCcchHHHHHHH
Confidence            9999999998765  7788999999999999999999999999999994 457899999999999999999999999999


Q ss_pred             HHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCcccc
Q 024145          170 ILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQ  249 (272)
Q Consensus       170 ~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  249 (272)
                      +++|+++++.+  .+||++|+|+||+++|++........            ...++.+|||+|++++||+++...+++|+
T Consensus       158 ~~~~~~~l~~~--~~~i~v~~v~PG~v~T~~~~~~~~~~------------~~~~~~~p~dva~~v~~l~~~~~~~~~~~  223 (235)
T 3l77_A          158 ARALVRTFQIE--NPDVRFFELRPGAVDTYFGGSKPGKP------------KEKGYLKPDEIAEAVRCLLKLPKDVRVEE  223 (235)
T ss_dssp             HHHHHHHHHHH--CTTSEEEEEEECSBSSSTTTCCSCCC------------GGGTCBCHHHHHHHHHHHHTSCTTCCCCE
T ss_pred             HHHHHHHHhhc--CCCeEEEEEeCCccccccccccCCcc------------cccCCCCHHHHHHHHHHHHcCCCCCccce
Confidence            99999999544  67999999999999999976422111            11367899999999999999999999999


Q ss_pred             EEEecCcee
Q 024145          250 NLVVDGGFS  258 (272)
Q Consensus       250 ~i~~dgG~~  258 (272)
                      .+..|+|..
T Consensus       224 ~~~~~~~~~  232 (235)
T 3l77_A          224 LMLRSVYQR  232 (235)
T ss_dssp             EEECCTTSC
T ss_pred             EEEeecccC
Confidence            999999963

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=100.00  E-value=8.7e-44  Score=301.21  Aligned_cols=243  Identities=23%  Similarity=0.270  Sum_probs=197.2

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHH-h
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSK-F   87 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~-~   87 (272)
                      +++||++|||||++|||++++++|+++|++|++++|+++..++..+++   +.++.++.+|++|+++++++++++.++ +
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   81 (260)
T 2qq5_A            2 PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQ   81 (260)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            468999999999999999999999999999999999988776666554   567899999999999999999999886 8


Q ss_pred             CCccEEEeCCC--CCC---CCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCch
Q 024145           88 GKLDIMYNNAG--ILD---RSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPA  162 (272)
Q Consensus        88 g~id~lv~~ag--~~~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  162 (272)
                      |++|+||||||  ...   ....++.+.+.++|++++++|+.+++.+++.+.|+|.+++.|+||++||..+..+. ....
T Consensus        82 g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-~~~~  160 (260)
T 2qq5_A           82 GRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYM-FNVP  160 (260)
T ss_dssp             TCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSCC-SSHH
T ss_pred             CCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCCC-CCCc
Confidence            99999999995  320   01256778889999999999999999999999999988778999999999887644 4678


Q ss_pred             hhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHH-HHHHhhcCCCCCCCCChHhHHHHHHHHhcC
Q 024145          163 YTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALI-ESSMSQMGNLKGEFLKTDGIANAALYLASD  241 (272)
Q Consensus       163 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  241 (272)
                      |++||+|+++|+++++.|++++||+||+|+||+++|++........... .........+.+++.+|||+|++++||+++
T Consensus       161 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~v~~l~s~  240 (260)
T 2qq5_A          161 YGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFSSAETTELSGKCVVALATD  240 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC----------------------CHHHHHHHHHHHHHHHHTC
T ss_pred             hHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhccccccchhHHHHHHhhhccCCCHHHHHHHHHHHhcC
Confidence            9999999999999999999999999999999999999875321111100 011111111124567899999999999998


Q ss_pred             CC-CCccccEEEecC
Q 024145          242 ES-SYVSGQNLVVDG  255 (272)
Q Consensus       242 ~~-~~~~G~~i~~dg  255 (272)
                      ++ .+++|++|.+|+
T Consensus       241 ~~~~~itG~~i~~~~  255 (260)
T 2qq5_A          241 PNILSLSGKVLPSCD  255 (260)
T ss_dssp             TTGGGGTTCEEEHHH
T ss_pred             cccccccceeechhh
Confidence            86 489999999874

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=100.00  E-value=1.3e-43  Score=293.57  Aligned_cols=221  Identities=27%  Similarity=0.320  Sum_probs=189.1

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGK   89 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (272)
                      |+++++|++|||||++|||++++++|+++|++|++++|+.+                 +|++|+++++++++++    ++
T Consensus         1 M~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~-----------------~D~~~~~~v~~~~~~~----g~   59 (223)
T 3uce_A            1 MMGSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG-----------------LDISDEKSVYHYFETI----GA   59 (223)
T ss_dssp             ----CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT-----------------CCTTCHHHHHHHHHHH----CS
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc-----------------cCCCCHHHHHHHHHHh----CC
Confidence            35678999999999999999999999999999999998764                 7999999998887754    89


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHH
Q 024145           90 LDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYG  169 (272)
Q Consensus        90 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a  169 (272)
                      +|+||||||.... ..++.+.+.++|++.+++|+.+++.++++++|+|.+  .|+||++||..+..+.++...|++||+|
T Consensus        60 id~lv~nAg~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~~sS~~~~~~~~~~~~Y~asK~a  136 (223)
T 3uce_A           60 FDHLIVTAGSYAP-AGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQ--GGSITLTSGMLSRKVVANTYVKAAINAA  136 (223)
T ss_dssp             EEEEEECCCCCCC-CSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEE--EEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CCEEEECCCCCCC-CCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccC--CeEEEEecchhhccCCCCchHHHHHHHH
Confidence            9999999998733 267889999999999999999999999999999965  5899999999999999999999999999


Q ss_pred             HHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCCh-hHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccc
Q 024145          170 ILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDP-ALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSG  248 (272)
Q Consensus       170 ~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  248 (272)
                      +++|+++++.|+++  |+||+|+||+++|++........ +...+......++ +++.+|||+|++++++++  +.+++|
T Consensus       137 ~~~~~~~la~e~~~--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dvA~~~~~l~~--~~~~tG  211 (223)
T 3uce_A          137 IEATTKVLAKELAP--IRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLPV-GKVGEASDIAMAYLFAIQ--NSYMTG  211 (223)
T ss_dssp             HHHHHHHHHHHHTT--SEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHSTT-CSCBCHHHHHHHHHHHHH--CTTCCS
T ss_pred             HHHHHHHHHHhhcC--cEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCCC-CCccCHHHHHHHHHHHcc--CCCCCC
Confidence            99999999999987  99999999999999987422111 1112223333444 889999999999999997  478999


Q ss_pred             cEEEecCceee
Q 024145          249 QNLVVDGGFSV  259 (272)
Q Consensus       249 ~~i~~dgG~~~  259 (272)
                      ++|.+|||..+
T Consensus       212 ~~i~vdgG~~~  222 (223)
T 3uce_A          212 TVIDVDGGALL  222 (223)
T ss_dssp             CEEEESTTGGG
T ss_pred             cEEEecCCeec
Confidence            99999999865

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=100.00  E-value=9.3e-44  Score=300.08  Aligned_cols=233  Identities=23%  Similarity=0.297  Sum_probs=200.5

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHH--HhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           16 KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLAD--KLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      |++|||||++|||++++++|+++|++|++++|+.+..++..+  ..+.++..+     |.++++++++++.++++++|+|
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~-----d~~~v~~~~~~~~~~~g~iD~l   76 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPM-----SEQEPAELIEAVTSAYGQVDVL   76 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEEC-----CCCSHHHHHHHHHHHHSCCCEE
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCcEEEE-----CHHHHHHHHHHHHHHhCCCCEE
Confidence            689999999999999999999999999999998877665543  224455444     6777888899999999999999


Q ss_pred             EeCCCCC-CCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHHHH
Q 024145           94 YNNAGIL-DRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILG  172 (272)
Q Consensus        94 v~~ag~~-~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~  172 (272)
                      |||||.. ..  .++.+.+.++|++.+++|+.+++.++++++|+|.+++.|+||++||..+..+.+....|++||+++++
T Consensus        77 v~nAg~~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~  154 (254)
T 1zmt_A           77 VSNDIFAPEF--QPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACT  154 (254)
T ss_dssp             EEECCCCCCC--CCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHHH
T ss_pred             EECCCcCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCCCCchHHHHHHHHHHH
Confidence            9999986 43  67888999999999999999999999999999987778999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCcEEEEEeCCcc---------cCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCC
Q 024145          173 LVKCLAAELGQYGIRVNCVSPYGL---------ATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDES  243 (272)
Q Consensus       173 ~~~~la~e~~~~gi~v~~i~Pg~v---------~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  243 (272)
                      |+++++.|++++||+||+|+||++         +|++...   .++.. +......++ +++.+|+|+|++++||+++++
T Consensus       155 ~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~---~~~~~-~~~~~~~p~-~~~~~p~dvA~~v~~l~s~~~  229 (254)
T 1zmt_A          155 LANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKT---NPEHV-AHVKKVTAL-QRLGTQKELGELVAFLASGSC  229 (254)
T ss_dssp             HHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTT---CHHHH-HHHHHHSSS-SSCBCHHHHHHHHHHHHTTSC
T ss_pred             HHHHHHHHhhhcCcEEEEEecCccccccccccCCCccccc---ChHHH-HHHhccCCC-CCCcCHHHHHHHHHHHhCccc
Confidence            999999999999999999999999         7777542   22222 222233344 788999999999999999999


Q ss_pred             CCccccEEEecCceeec
Q 024145          244 SYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       244 ~~~~G~~i~~dgG~~~~  260 (272)
                      .+++|++|.+|||....
T Consensus       230 ~~~tG~~~~vdgG~~~~  246 (254)
T 1zmt_A          230 DYLTGQVFWLAGGFPMI  246 (254)
T ss_dssp             GGGTTCEEEESTTCCCC
T ss_pred             CCccCCEEEECCCchhh
Confidence            99999999999998753

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=100.00  E-value=1.7e-43  Score=298.28  Aligned_cols=241  Identities=26%  Similarity=0.392  Sum_probs=208.7

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecC-cchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQ-DKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      ++++|++|||||++|||++++++|+++|++|++++|+ ++..+++.+++   +.++.++.+|++|+++++++++++.+++
T Consensus         4 ~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (258)
T 3afn_B            4 DLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKF   83 (258)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4789999999999999999999999999999999998 77666665544   5679999999999999999999999999


Q ss_pred             CCccEEEeCCCC-CCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCC--C---ceEEEEecccccc-cCCCC
Q 024145           88 GKLDIMYNNAGI-LDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ--K---GCILFTASACTEI-AGLGS  160 (272)
Q Consensus        88 g~id~lv~~ag~-~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~---g~iv~iss~~~~~-~~~~~  160 (272)
                      +++|+||||||. ...  .++.+.+.+++++.+++|+.+++.++++++|.|.+++  .   ++||++||..+.. +.++.
T Consensus        84 g~id~vi~~Ag~~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~  161 (258)
T 3afn_B           84 GGIDVLINNAGGLVGR--KPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGA  161 (258)
T ss_dssp             SSCSEEEECCCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCCCTTC
T ss_pred             CCCCEEEECCCCcCCc--CccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCCCCCc
Confidence            999999999997 433  5678889999999999999999999999999987543  3   8999999998887 78888


Q ss_pred             chhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhc
Q 024145          161 PAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLAS  240 (272)
Q Consensus       161 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  240 (272)
                      ..|++||++++.+++.++.|++++||++++|+||+++|++....  .+. ..+......+. +++.+|+|+|++++++++
T Consensus       162 ~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~-~~~~~~~~~~~-~~~~~~~dva~~~~~l~~  237 (258)
T 3afn_B          162 GLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADK--TQD-VRDRISNGIPM-GRFGTAEEMAPAFLFFAS  237 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTC--CHH-HHHHHHTTCTT-CSCBCGGGTHHHHHHHHC
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCccccccccc--CHH-HHHHHhccCCC-CcCCCHHHHHHHHHHHhC
Confidence            99999999999999999999999999999999999999987631  222 22222233333 788999999999999998


Q ss_pred             CCCC-CccccEEEecCcee
Q 024145          241 DESS-YVSGQNLVVDGGFS  258 (272)
Q Consensus       241 ~~~~-~~~G~~i~~dgG~~  258 (272)
                      +... +++|++|.+|||..
T Consensus       238 ~~~~~~~~G~~~~v~gg~~  256 (258)
T 3afn_B          238 HLASGYITGQVLDINGGQY  256 (258)
T ss_dssp             HHHHTTCCSEEEEESTTSS
T ss_pred             cchhccccCCEEeECCCcc
Confidence            7666 89999999999974

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=100.00  E-value=3.6e-43  Score=294.37  Aligned_cols=240  Identities=28%  Similarity=0.384  Sum_probs=205.6

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      +++++|++|||||++|||++++++|+++|++|++++|+++..+++.+++. ...++.+|++|+++++++++    +++++
T Consensus         3 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~----~~~~i   77 (244)
T 3d3w_A            3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP-GIEPVCVDLGDWEATERALG----SVGPV   77 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST-TCEEEECCTTCHHHHHHHHT----TCCCC
T ss_pred             cccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC-CCCEEEEeCCCHHHHHHHHH----HcCCC
Confidence            45789999999999999999999999999999999999887776666553 46678999999999888776    56789


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCC-CceEEEEecccccccCCCCchhhhhHHH
Q 024145           91 DIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ-KGCILFTASACTEIAGLGSPAYTISKYG  169 (272)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~Y~~sK~a  169 (272)
                      |+||||||....  .++.+.+.+++++.+++|+.+++.+++++.+.|.+++ .++||++||..+..+.++...|++||++
T Consensus        78 d~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  155 (244)
T 3d3w_A           78 DLLVNNAAVALL--QPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGA  155 (244)
T ss_dssp             CEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred             CEEEECCccCCC--cchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCCCCchHHHHHHH
Confidence            999999998654  5677889999999999999999999999999998765 7999999999998888889999999999


Q ss_pred             HHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCcccc
Q 024145          170 ILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQ  249 (272)
Q Consensus       170 ~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  249 (272)
                      ++.++++++.|++++||++++|+||+++|++.......+...... ....+. +++.+|+|+|+++++++++...+++|+
T Consensus       156 ~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~dva~~~~~l~~~~~~~~~G~  233 (244)
T 3d3w_A          156 LDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTM-LNRIPL-GKFAEVEHVVNAILFLLSDRSGMTTGS  233 (244)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCSTTHHHHH-HHTCTT-CSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccChHHHHHH-HhhCCC-CCCcCHHHHHHHHHHHcCccccCCCCC
Confidence            999999999999999999999999999999865211111221222 222334 788999999999999999888899999


Q ss_pred             EEEecCceee
Q 024145          250 NLVVDGGFSV  259 (272)
Q Consensus       250 ~i~~dgG~~~  259 (272)
                      +|.+|||...
T Consensus       234 ~~~v~gG~~~  243 (244)
T 3d3w_A          234 TLPVEGGFWA  243 (244)
T ss_dssp             EEEESTTGGG
T ss_pred             EEEECCCccC
Confidence            9999999764

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=7.6e-43  Score=301.58  Aligned_cols=247  Identities=28%  Similarity=0.354  Sum_probs=210.3

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh--------CCceEEEEecCCCHHHHHHHHH
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL--------GQDVCYIHCDISNEDEVINLVD   81 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~--------~~~~~~~~~D~~~~~~~~~~~~   81 (272)
                      ..++++|++|||||++|||++++++|+++|++|++++|+.+..++..+++        +.++.++.+|++|+++++++++
T Consensus        13 ~~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   92 (303)
T 1yxm_A           13 PGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVK   92 (303)
T ss_dssp             TTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHH
T ss_pred             cCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHH
Confidence            34689999999999999999999999999999999999987776665543        4579999999999999999999


Q ss_pred             HHHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCc
Q 024145           82 TAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSP  161 (272)
Q Consensus        82 ~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  161 (272)
                      ++.++++++|+||||||....  .++.+.+.+++++.+++|+.+++.+++++++.+.++..++||++||.. ..+.+...
T Consensus        93 ~~~~~~g~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~-~~~~~~~~  169 (303)
T 1yxm_A           93 STLDTFGKINFLVNNGGGQFL--SPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-KAGFPLAV  169 (303)
T ss_dssp             HHHHHHSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC-TTCCTTCH
T ss_pred             HHHHHcCCCCEEEECCCCCCC--CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec-ccCCCcch
Confidence            999999999999999997654  567788999999999999999999999999976655679999999988 77888889


Q ss_pred             hhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCC-hhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhc
Q 024145          162 AYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVD-PALIESSMSQMGNLKGEFLKTDGIANAALYLAS  240 (272)
Q Consensus       162 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  240 (272)
                      .|+++|+++++++++++.|+.++||++++|+||+++|++....... .+...+......+. +++.+|+|+|++++++++
T Consensus       170 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~dvA~~i~~l~~  248 (303)
T 1yxm_A          170 HSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPA-KRIGVPEEVSSVVCFLLS  248 (303)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTT-SSCBCTHHHHHHHHHHHS
T ss_pred             hhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHHHHhcCcc-cCCCCHHHHHHHHHHHhC
Confidence            9999999999999999999999999999999999999953211110 01111111122333 788999999999999999


Q ss_pred             CCCCCccccEEEecCceeec
Q 024145          241 DESSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       241 ~~~~~~~G~~i~~dgG~~~~  260 (272)
                      +...+++|++|.+|||....
T Consensus       249 ~~~~~~~G~~~~v~gG~~~~  268 (303)
T 1yxm_A          249 PAASFITGQSVDVDGGRSLY  268 (303)
T ss_dssp             GGGTTCCSCEEEESTTGGGC
T ss_pred             cccccCCCcEEEECCCeecc
Confidence            88899999999999998764

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=1.5e-43  Score=298.06  Aligned_cols=235  Identities=23%  Similarity=0.316  Sum_probs=196.6

Q ss_pred             ccCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145            8 APFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus         8 ~~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      ....+++||++|||||++|||++++++|+++|++|++++|+++.    .++++ .+.++ +|+  .++++++++++    
T Consensus        12 ~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~----~~~~~-~~~~~-~D~--~~~~~~~~~~~----   79 (249)
T 1o5i_A           12 HMELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEEL----LKRSG-HRYVV-CDL--RKDLDLLFEKV----   79 (249)
T ss_dssp             ----CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH----HHHTC-SEEEE-CCT--TTCHHHHHHHS----
T ss_pred             hHHhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHH----HHhhC-CeEEE-eeH--HHHHHHHHHHh----
Confidence            44677899999999999999999999999999999999998733    23343 56777 999  55666666554    


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhH
Q 024145           88 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISK  167 (272)
Q Consensus        88 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK  167 (272)
                      .++|+||||||....  .++.+.+.++|++.+++|+.+++.+++.++|.|.+++.|+||++||..+..+.++...|++||
T Consensus        80 ~~iD~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  157 (249)
T 1o5i_A           80 KEVDILVLNAGGPKA--GFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSAR  157 (249)
T ss_dssp             CCCSEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             cCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCCCCCchHHHHH
Confidence            379999999998654  667889999999999999999999999999999887789999999999999989999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCcc
Q 024145          168 YGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVS  247 (272)
Q Consensus       168 ~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  247 (272)
                      ++++.|+++++.|++++||++|+|+||+++|++....  ........+....+. +++.+|+|+|++++||+++++.+++
T Consensus       158 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~p~-~~~~~~~dvA~~i~~l~s~~~~~~t  234 (249)
T 1o5i_A          158 MALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKEL--LSEEKKKQVESQIPM-RRMAKPEEIASVVAFLCSEKASYLT  234 (249)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHH--SCHHHHHHHHTTSTT-SSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCccccc--chhhHHHHHHhcCCC-CCCcCHHHHHHHHHHHcCccccCCC
Confidence            9999999999999999999999999999999986421  111111022233344 7899999999999999999889999


Q ss_pred             ccEEEecCceee
Q 024145          248 GQNLVVDGGFSV  259 (272)
Q Consensus       248 G~~i~~dgG~~~  259 (272)
                      |++|.+|||...
T Consensus       235 G~~~~vdgG~~~  246 (249)
T 1o5i_A          235 GQTIVVDGGLSK  246 (249)
T ss_dssp             SCEEEESTTCCC
T ss_pred             CCEEEECCCccc
Confidence            999999999764

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=100.00  E-value=7.6e-43  Score=292.32  Aligned_cols=238  Identities=27%  Similarity=0.446  Sum_probs=207.4

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCeEEEe-ecCcchHHHHHHHh---CCceEE-EEecCCCHHHHHHHHHHHHHHhCC
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGAKVVIA-DVQDKLGEDLADKL---GQDVCY-IHCDISNEDEVINLVDTAVSKFGK   89 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~~V~~~-~r~~~~~~~~~~~~---~~~~~~-~~~D~~~~~~~~~~~~~~~~~~g~   89 (272)
                      +|++|||||++|||++++++|+++|++|+++ +|+++..+++.+++   +.++.. +.+|++|.++++++++++.+++++
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGG   80 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCC
Confidence            4799999999999999999999999999998 78877766655544   456667 999999999999999999999999


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHH
Q 024145           90 LDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYG  169 (272)
Q Consensus        90 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a  169 (272)
                      +|+||||||....  .++.+.+.+++++.+++|+.+++.+++.+++.|.+++.++||++||..+..+.++...|++||++
T Consensus        81 ~d~li~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  158 (245)
T 2ph3_A           81 LDTLVNNAGITRD--TLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNPGQANYVASKAG  158 (245)
T ss_dssp             CCEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCSSBHHHHHHHHH
T ss_pred             CCEEEECCCCCCC--CCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCCCCCcchHHHHHH
Confidence            9999999998754  56788899999999999999999999999999987778999999999988888889999999999


Q ss_pred             HHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCcccc
Q 024145          170 ILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQ  249 (272)
Q Consensus       170 ~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  249 (272)
                      ++.++++++.|+.++||++++|+||+++|++...  ..... ........+. +++.+|+|+|++++++++++..+++|+
T Consensus       159 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~--~~~~~-~~~~~~~~~~-~~~~~~~dva~~~~~l~~~~~~~~~G~  234 (245)
T 2ph3_A          159 LIGFTRAVAKEYAQRGITVNAVAPGFIETEMTER--LPQEV-KEAYLKQIPA-GRFGRPEEVAEAVAFLVSEKAGYITGQ  234 (245)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT--SCHHH-HHHHHHTCTT-CSCBCHHHHHHHHHHHTSGGGTTCCSC
T ss_pred             HHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhh--cCHHH-HHHHHhcCCC-CCCcCHHHHHHHHHHHhCcccccccCC
Confidence            9999999999999999999999999999998763  12222 2222223333 788999999999999999888899999


Q ss_pred             EEEecCcee
Q 024145          250 NLVVDGGFS  258 (272)
Q Consensus       250 ~i~~dgG~~  258 (272)
                      ++.+|||..
T Consensus       235 ~~~v~gg~~  243 (245)
T 2ph3_A          235 TLCVDGGLT  243 (245)
T ss_dssp             EEEESTTCS
T ss_pred             EEEECCCCC
Confidence            999999964

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=100.00  E-value=2.6e-42  Score=293.71  Aligned_cols=244  Identities=30%  Similarity=0.445  Sum_probs=208.5

Q ss_pred             cCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeec-CcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHH
Q 024145            9 PFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADV-QDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAV   84 (272)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r-~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~   84 (272)
                      +.+++++|++|||||+||||++++++|+++|++|++++| +++..+++.+++   +.++.++.+|++|+++++++++++.
T Consensus        15 ~~~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (274)
T 1ja9_A           15 ASKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAV   94 (274)
T ss_dssp             -CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence            346789999999999999999999999999999999998 665555554443   5678999999999999999999999


Q ss_pred             HHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccccc-ccCCCCchh
Q 024145           85 SKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTE-IAGLGSPAY  163 (272)
Q Consensus        85 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~-~~~~~~~~Y  163 (272)
                      ++++++|+||||||....  .++.+.+.++|++.+++|+.+++.+++++++.|.+ + ++||++||..+. .+.+....|
T Consensus        95 ~~~~~~d~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~-~~iv~~sS~~~~~~~~~~~~~Y  170 (274)
T 1ja9_A           95 SHFGGLDFVMSNSGMEVW--CDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRR-G-GRIILTSSIAAVMTGIPNHALY  170 (274)
T ss_dssp             HHHSCEEEEECCCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEE-E-EEEEEECCGGGTCCSCCSCHHH
T ss_pred             HHcCCCCEEEECCCCCCC--cccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-C-CEEEEEcChHhccCCCCCCchH
Confidence            999999999999998754  66778899999999999999999999999999973 3 899999999888 778888999


Q ss_pred             hhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCC----------CCChhHHHHHHhhcCCCCCCCCChHhHHH
Q 024145          164 TISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKG----------GVDPALIESSMSQMGNLKGEFLKTDGIAN  233 (272)
Q Consensus       164 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~dva~  233 (272)
                      ++||++++.+++.++.|++++||++++++||+++|++....          ....+..........+. +++.+|+|+|+
T Consensus       171 ~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~  249 (274)
T 1ja9_A          171 AGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPL-KRIGYPADIGR  249 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTT-SSCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhcCCC-CCccCHHHHHH
Confidence            99999999999999999999999999999999999986510          01112222222233344 78899999999


Q ss_pred             HHHHHhcCCCCCccccEEEecCce
Q 024145          234 AALYLASDESSYVSGQNLVVDGGF  257 (272)
Q Consensus       234 ~~~~l~s~~~~~~~G~~i~~dgG~  257 (272)
                      +++++++++..+++|++|.+|||.
T Consensus       250 ~i~~l~~~~~~~~~G~~~~v~gG~  273 (274)
T 1ja9_A          250 AVSALCQEESEWINGQVIKLTGGG  273 (274)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHhCcccccccCcEEEecCCc
Confidence            999999988889999999999995

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=100.00  E-value=1.5e-43  Score=304.56  Aligned_cols=237  Identities=21%  Similarity=0.201  Sum_probs=194.9

Q ss_pred             CCCccCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHH
Q 024145            5 SSAAPFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAV   84 (272)
Q Consensus         5 ~~~~~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   84 (272)
                      +.+.++.+++||++|||||++|||++++++|+++|++|++++|+.+..++..++++.++.++.+|++|.++++++++++ 
T Consensus         6 ~~~~~~~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~-   84 (291)
T 3rd5_A            6 WTAADLPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGV-   84 (291)
T ss_dssp             CCGGGCCCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTC-
T ss_pred             CChhhccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhc-
Confidence            4456788999999999999999999999999999999999999999888888888889999999999999999888766 


Q ss_pred             HHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccccccc--------
Q 024145           85 SKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIA--------  156 (272)
Q Consensus        85 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~--------  156 (272)
                         +++|+||||||+..+    ..+.+.++|++++++|+.+++.++++++|+|.+    +||++||..+..+        
T Consensus        85 ---~~iD~lv~nAg~~~~----~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~----riv~isS~~~~~~~~~~~~~~  153 (291)
T 3rd5_A           85 ---SGADVLINNAGIMAV----PYALTVDGFESQIGTNHLGHFALTNLLLPRLTD----RVVTVSSMAHWPGRINLEDLN  153 (291)
T ss_dssp             ---CCEEEEEECCCCCSC----CCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEE----EEEEECCGGGTTCCCCSSCTT
T ss_pred             ---CCCCEEEECCcCCCC----cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh----heeEeechhhccCCCCccccc
Confidence               689999999998643    356678899999999999999999999999975    7999999987754        


Q ss_pred             -----CCCCchhhhhHHHHHHHHHHHHHHhcCCC--cEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCC-h
Q 024145          157 -----GLGSPAYTISKYGILGLVKCLAAELGQYG--IRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLK-T  228 (272)
Q Consensus       157 -----~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  228 (272)
                           .++...|++||+|++.|+++++.|++++|  |++|+|+||+++|++.+..   .+........ .+. +++.. |
T Consensus       154 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~---~~~~~~~~~~-~~~-~~~~~~~  228 (291)
T 3rd5_A          154 WRSRRYSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGAS---GRKLGDALMS-AAT-RVVATDA  228 (291)
T ss_dssp             CSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC-------------------------CHHH
T ss_pred             ccccCCCCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCcccccccc---chHHHHHHHH-HHH-HHHhCCH
Confidence                 23456899999999999999999999887  9999999999999998742   1222222211 222 44444 9


Q ss_pred             HhHHHHHHHHhcCCCCCccccEEEecCceeec
Q 024145          229 DGIANAALYLASDESSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       229 ~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~  260 (272)
                      ||+|+.++|++++  .+++|++|.+|||+.-.
T Consensus       229 ~~~A~~~~~l~~~--~~~~G~~~~vdgG~~~~  258 (291)
T 3rd5_A          229 DFGARQTLYAASQ--DLPGDSFVGPRFGYLGR  258 (291)
T ss_dssp             HHHHHHHHHHHHS--CCCTTCEEEETTSSSSC
T ss_pred             HHHHHHHHHHHcC--CCCCCceeCCcccccCc
Confidence            9999999999988  48999999999998753

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=100.00  E-value=2.6e-42  Score=289.02  Aligned_cols=240  Identities=28%  Similarity=0.389  Sum_probs=205.7

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      .++++|++|||||+||||++++++|+++|++|++++|+++..++..++. ..+.++.+|++|+++++++++    .++++
T Consensus         3 ~~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~----~~~~i   77 (244)
T 1cyd_A            3 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC-PGIEPVCVDLGDWDATEKALG----GIGPV   77 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS-TTCEEEECCTTCHHHHHHHHT----TCCCC
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-cCCCcEEecCCCHHHHHHHHH----HcCCC
Confidence            3578999999999999999999999999999999999987776666554 346778999999999888776    56789


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCC-CceEEEEecccccccCCCCchhhhhHHH
Q 024145           91 DIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ-KGCILFTASACTEIAGLGSPAYTISKYG  169 (272)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~Y~~sK~a  169 (272)
                      |+||||||....  .++.+.+.+++++.+++|+.+++.+++++.+.|.+++ .++||++||..+..+.+....|++||++
T Consensus        78 d~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  155 (244)
T 1cyd_A           78 DLLVNNAALVIM--QPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGA  155 (244)
T ss_dssp             SEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred             CEEEECCcccCC--CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCCCcchhHHHHHH
Confidence            999999998754  5678889999999999999999999999999998766 7999999999998888888999999999


Q ss_pred             HHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCcccc
Q 024145          170 ILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQ  249 (272)
Q Consensus       170 ~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  249 (272)
                      ++.+++.++.|++++||++++++||+++|++.......+...... ....+. +++.+|+|+|++++++++++..+++|+
T Consensus       156 ~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~dva~~~~~l~~~~~~~~~G~  233 (244)
T 1cyd_A          156 MTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKL-KERHPL-RKFAEVEDVVNSILFLLSDRSASTSGG  233 (244)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHH-HHHSTT-SSCBCHHHHHHHHHHHHSGGGTTCCSS
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEecCcccCccccccccCHHHHHHH-HhcCCc-cCCCCHHHHHHHHHHHhCchhhcccCC
Confidence            999999999999999999999999999999865221222222222 222344 789999999999999999888899999


Q ss_pred             EEEecCceee
Q 024145          250 NLVVDGGFSV  259 (272)
Q Consensus       250 ~i~~dgG~~~  259 (272)
                      .+.+|||..+
T Consensus       234 ~~~v~gG~~~  243 (244)
T 1cyd_A          234 GILVDAGYLA  243 (244)
T ss_dssp             EEEESTTGGG
T ss_pred             EEEECCCccC
Confidence            9999999753

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=100.00  E-value=1.3e-42  Score=299.54  Aligned_cols=245  Identities=21%  Similarity=0.207  Sum_probs=198.0

Q ss_pred             CCCCCcEEEEeCCC--ChHHHHHHHHHHHcCCeEEEeecCcc-----------hHHHHHHHhCC-----ceEEEEec---
Q 024145           11 KRLEGKVAIITGGA--SGIGAMAVELFHENGAKVVIADVQDK-----------LGEDLADKLGQ-----DVCYIHCD---   69 (272)
Q Consensus        11 ~~l~~k~vlItGas--~giG~aia~~la~~G~~V~~~~r~~~-----------~~~~~~~~~~~-----~~~~~~~D---   69 (272)
                      ++++||++|||||+  +|||++++++|+++|++|++++|++.           ..++. +++..     ....+.+|   
T Consensus         4 ~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~   82 (297)
T 1d7o_A            4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQS-RVLPDGSLMEIKKVYPLDAVF   82 (297)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGG-GBCTTSSBCCEEEEEEECTTC
T ss_pred             cccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhh-hhhccccccccccccccceec
Confidence            35789999999999  99999999999999999999986531           11111 11211     12344443   


Q ss_pred             -----CC----C--------HHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHH
Q 024145           70 -----IS----N--------EDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKH  132 (272)
Q Consensus        70 -----~~----~--------~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~  132 (272)
                           ++    |        +++++++++++.+++|++|+||||||+......++.+.+.++|++++++|+.+++.++++
T Consensus        83 ~~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~  162 (297)
T 1d7o_A           83 DNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSH  162 (297)
T ss_dssp             CSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred             cchhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHH
Confidence                 32    2        568999999999999999999999997542226678899999999999999999999999


Q ss_pred             HHHhhcCCCCceEEEEecccccccCCCC-chhhhhHHHHHHHHHHHHHHhcC-CCcEEEEEeCCcccCCcccCCCCChhH
Q 024145          133 AARVMVPQQKGCILFTASACTEIAGLGS-PAYTISKYGILGLVKCLAAELGQ-YGIRVNCVSPYGLATGMSMKGGVDPAL  210 (272)
Q Consensus       133 ~~~~~~~~~~g~iv~iss~~~~~~~~~~-~~Y~~sK~a~~~~~~~la~e~~~-~gi~v~~i~Pg~v~t~~~~~~~~~~~~  210 (272)
                      ++|+|.+  .|+||++||..+..+.+++ ..|++||+|+++|+++++.|+++ +||+||+|+||+++|++..... ..+.
T Consensus       163 ~~~~m~~--~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~~-~~~~  239 (297)
T 1d7o_A          163 FLPIMNP--GGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIG-FIDT  239 (297)
T ss_dssp             HGGGEEE--EEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCS-HHHH
T ss_pred             HHHHhcc--CceEEEEeccccccCCCCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhcc-ccHH
Confidence            9999965  4899999999998888887 69999999999999999999985 8999999999999999976321 1122


Q ss_pred             HHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccccEEEecCceeec
Q 024145          211 IESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~  260 (272)
                      ..+......++ +++.+|||+|+.++||+++.+.+++|++|.+|||+.+.
T Consensus       240 ~~~~~~~~~p~-~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG~~~~  288 (297)
T 1d7o_A          240 MIEYSYNNAPI-QKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNSM  288 (297)
T ss_dssp             HHHHHHHHSSS-CCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHhhccCCC-CCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCceee
Confidence            22222223344 78899999999999999998999999999999998775

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=100.00  E-value=6.8e-43  Score=303.71  Aligned_cols=245  Identities=21%  Similarity=0.218  Sum_probs=197.6

Q ss_pred             CCCCCcEEEEeCC--CChHHHHHHHHHHHcCCeEEEeecCcc-----------hHHHHHHHh--CC---ceEEEEecC--
Q 024145           11 KRLEGKVAIITGG--ASGIGAMAVELFHENGAKVVIADVQDK-----------LGEDLADKL--GQ---DVCYIHCDI--   70 (272)
Q Consensus        11 ~~l~~k~vlItGa--s~giG~aia~~la~~G~~V~~~~r~~~-----------~~~~~~~~~--~~---~~~~~~~D~--   70 (272)
                      ++++||++|||||  ++|||++++++|+++|++|++++|++.           ..++. +++  +.   ...++.+|+  
T Consensus         5 ~~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~~   83 (315)
T 2o2s_A            5 IDLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDED-RKLPDGSLIEFAGVYPLDAAF   83 (315)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHH-HBCTTSCBCCCSCEEECCTTC
T ss_pred             ccCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhh-hhhhccccccccccccccccc
Confidence            4578999999999  899999999999999999999987531           12222 222  11   124444443  


Q ss_pred             ----------C--------CHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHH
Q 024145           71 ----------S--------NEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKH  132 (272)
Q Consensus        71 ----------~--------~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~  132 (272)
                                +        |+++++++++++.+++|++|+||||||+......++.+.+.++|++++++|+.+++.++++
T Consensus        84 ~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~  163 (315)
T 2o2s_A           84 DKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQH  163 (315)
T ss_dssp             SSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred             cccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHH
Confidence                      3        3568999999999999999999999997642225678899999999999999999999999


Q ss_pred             HHHhhcCCCCceEEEEecccccccCCCC-chhhhhHHHHHHHHHHHHHHhcC-CCcEEEEEeCCcccCCcccCCCCC--h
Q 024145          133 AARVMVPQQKGCILFTASACTEIAGLGS-PAYTISKYGILGLVKCLAAELGQ-YGIRVNCVSPYGLATGMSMKGGVD--P  208 (272)
Q Consensus       133 ~~~~~~~~~~g~iv~iss~~~~~~~~~~-~~Y~~sK~a~~~~~~~la~e~~~-~gi~v~~i~Pg~v~t~~~~~~~~~--~  208 (272)
                      ++|+|.+  .|+||++||..+..+.+++ ..|++||+|+++|+++++.|+++ +||+||+|+||+++|++.......  .
T Consensus       164 ~~~~m~~--~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~  241 (315)
T 2o2s_A          164 FGPIMNE--GGSAVTLSYLAAERVVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGKSGEK  241 (315)
T ss_dssp             HSTTEEE--EEEEEEEEEGGGTSCCTTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHHTTCSSSS
T ss_pred             HHHHHhc--CCEEEEEecccccccCCCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhhccccccc
Confidence            9999965  3899999999998888887 58999999999999999999985 899999999999999986532110  0


Q ss_pred             ---hHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccccEEEecCceee
Q 024145          209 ---ALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSV  259 (272)
Q Consensus       209 ---~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~  259 (272)
                         +...+......++ +++.+|||+|+.++||+++.+.+++|++|.+|||..+
T Consensus       242 ~~~~~~~~~~~~~~p~-~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~  294 (315)
T 2o2s_A          242 SFIDYAIDYSYNNAPL-RRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGLHA  294 (315)
T ss_dssp             CHHHHHHHHHHHHSSS-CCCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred             hhHHHHHHHHhccCCC-CCCCCHHHHHHHHHHHhCchhccCcCCEEEECCCeee
Confidence               1111112223444 7899999999999999999999999999999999875

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=100.00  E-value=1e-41  Score=285.58  Aligned_cols=231  Identities=24%  Similarity=0.293  Sum_probs=208.2

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-------eEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHH
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGA-------KVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTA   83 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~-------~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~   83 (272)
                      ++|++|||||++|||++++++|+++|+       +|++++|+.+..+++.+++   +.++.++.+|++|+++++++++++
T Consensus         1 ~~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   80 (244)
T 2bd0_A            1 MKHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHI   80 (244)
T ss_dssp             -CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHH
Confidence            378999999999999999999999999       9999999987777666555   567899999999999999999999


Q ss_pred             HHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchh
Q 024145           84 VSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAY  163 (272)
Q Consensus        84 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y  163 (272)
                      .++++++|+||||||....  .++.+.+.++|++.+++|+.+++.++++++|+|.+++.++||++||..+..+.++...|
T Consensus        81 ~~~~g~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y  158 (244)
T 2bd0_A           81 VERYGHIDCLVNNAGVGRF--GALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIY  158 (244)
T ss_dssp             HHHTSCCSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHH
T ss_pred             HHhCCCCCEEEEcCCcCCc--CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCCCCCchh
Confidence            9999999999999998754  67788899999999999999999999999999987778999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCC
Q 024145          164 TISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDES  243 (272)
Q Consensus       164 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  243 (272)
                      ++||+++++|+++++.|+.++||++++|+||+++|++......  ..           ..++.+|+|+|+++++++++..
T Consensus       159 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~--~~-----------~~~~~~~~dva~~~~~l~~~~~  225 (244)
T 2bd0_A          159 CMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDD--EM-----------QALMMMPEDIAAPVVQAYLQPS  225 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCS--TT-----------GGGSBCHHHHHHHHHHHHTSCT
T ss_pred             HHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhccc--cc-----------cccCCCHHHHHHHHHHHHhCCc
Confidence            9999999999999999999999999999999999998763211  10           1367899999999999999999


Q ss_pred             CCccccEEEecCceee
Q 024145          244 SYVSGQNLVVDGGFSV  259 (272)
Q Consensus       244 ~~~~G~~i~~dgG~~~  259 (272)
                      .+++|+++..++|...
T Consensus       226 ~~~~g~~~~~~~~~~~  241 (244)
T 2bd0_A          226 RTVVEEIILRPTSGDI  241 (244)
T ss_dssp             TEEEEEEEEEETTCCC
T ss_pred             cccchheEEecccccc
Confidence            9999999999998765

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=100.00  E-value=1.1e-41  Score=291.26  Aligned_cols=239  Identities=22%  Similarity=0.302  Sum_probs=204.3

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDI   92 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   92 (272)
                      +++|++|||||++|||++++++|+++|++|++++|+.+..+++.++.+.++.++.+|++|.++++++++++.++++++|+
T Consensus         3 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~   82 (281)
T 3m1a_A            3 ESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDV   82 (281)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCE
Confidence            57899999999999999999999999999999999999888888888888999999999999999999999999999999


Q ss_pred             EEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHHHH
Q 024145           93 MYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILG  172 (272)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~  172 (272)
                      ||||||....  .++.+.+.++|++.+++|+.+++.+++.++|+|.+++.|+||++||..+..+.++...|++||+++++
T Consensus        83 lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (281)
T 3m1a_A           83 LVNNAGRTQV--GAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLSFAGFSAYSATKAALEQ  160 (281)
T ss_dssp             EEECCCCEEE--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHHHH
T ss_pred             EEECCCcCCC--CChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCCCCchHHHHHHHHHHH
Confidence            9999998765  67889999999999999999999999999999988788999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCC-----ChhH---HH--HHHhhcCCCCCCCCChHhHHHHHHHHhcCC
Q 024145          173 LVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGV-----DPAL---IE--SSMSQMGNLKGEFLKTDGIANAALYLASDE  242 (272)
Q Consensus       173 ~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~-----~~~~---~~--~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  242 (272)
                      ++++++.|++++||++++|+||+++|++......     ....   ..  .......+ .+++.+|+|+|++++++++++
T Consensus       161 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dva~a~~~~~~~~  239 (281)
T 3m1a_A          161 LSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQGSD-GSQPGDPAKAAAAIRLALDTE  239 (281)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHHHC------CBCHHHHHHHHHHHHHSS
T ss_pred             HHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHHhhcc-CCCCCCHHHHHHHHHHHHhCC
Confidence            9999999999999999999999999998653211     1111   11  01111222 367899999999999999775


Q ss_pred             CCCccccEEEecCce
Q 024145          243 SSYVSGQNLVVDGGF  257 (272)
Q Consensus       243 ~~~~~G~~i~~dgG~  257 (272)
                      .   .|..+++.++.
T Consensus       240 ~---~~~~~~l~s~~  251 (281)
T 3m1a_A          240 K---TPLRLALGGDA  251 (281)
T ss_dssp             S---CCSEEEESHHH
T ss_pred             C---CCeEEecCchH
Confidence            4   45666665543

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=4.6e-42  Score=321.29  Aligned_cols=230  Identities=30%  Similarity=0.456  Sum_probs=195.7

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcc-hHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDK-LGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGK   89 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (272)
                      .+++||++|||||++|||++++++|+++|++|++++|+.. ...+..++.+.++..+.+|++  ++.+++++++.+++|+
T Consensus       318 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~--~~~~~~~~~~~~~~G~  395 (604)
T 2et6_A          318 VSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAAGGEAWPDQHDVA--KDSEAIIKNVIDKYGT  395 (604)
T ss_dssp             CCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCEEEEECCCHH--HHHHHHHHHHHHHHSC
T ss_pred             cccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHHHHHHHHhcCCeEEEEEcChH--HHHHHHHHHHHHhcCC
Confidence            4689999999999999999999999999999999886432 111222233566777778873  5667889999999999


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHH
Q 024145           90 LDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYG  169 (272)
Q Consensus        90 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a  169 (272)
                      +|+||||||+...  .++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||..+..+.+++..|++||+|
T Consensus       396 iDiLVnNAGi~~~--~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~~~~~~Y~asKaa  473 (604)
T 2et6_A          396 IDILVNNAGILRD--RSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKAG  473 (604)
T ss_dssp             CCEEEECCCCCCC--BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTBHHHHHHHHH
T ss_pred             CCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCChhHHHHHHH
Confidence            9999999998765  67889999999999999999999999999999988788999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCcccc
Q 024145          170 ILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQ  249 (272)
Q Consensus       170 ~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  249 (272)
                      +.+|+++++.|++++||+||+|+||. +|+|.....  ++       .   . .+..+|+|+|+.++||+++.+. ++|+
T Consensus       474 l~~lt~~la~El~~~gIrVn~v~PG~-~T~m~~~~~--~~-------~---~-~~~~~pe~vA~~v~~L~s~~~~-itG~  538 (604)
T 2et6_A          474 ILGLSKTMAIEGAKNNIKVNIVAPHA-ETAMTLSIM--RE-------Q---D-KNLYHADQVAPLLVYLGTDDVP-VTGE  538 (604)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECC-CCCC----------------------CCSSCGGGTHHHHHHTTSTTCC-CCSC
T ss_pred             HHHHHHHHHHHhCccCeEEEEEcCCC-CCccccccC--ch-------h---h-ccCCCHHHHHHHHHHHhCCccC-CCCc
Confidence            99999999999999999999999996 999865210  00       0   0 2446899999999999999888 9999


Q ss_pred             EEEecCceee
Q 024145          250 NLVVDGGFSV  259 (272)
Q Consensus       250 ~i~~dgG~~~  259 (272)
                      +|.+|||...
T Consensus       539 ~~~vdGG~~~  548 (604)
T 2et6_A          539 TFEIGGGWIG  548 (604)
T ss_dssp             EEEEETTEEE
T ss_pred             EEEECCCeeE
Confidence            9999999875

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=100.00  E-value=2.1e-42  Score=287.57  Aligned_cols=225  Identities=19%  Similarity=0.255  Sum_probs=189.5

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEe
Q 024145           16 KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYN   95 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~   95 (272)
                      |++|||||++|||++++++|+++|++|++++|+++..+++.++++.++.++.+|+++.++++++++++.+.   +|+|||
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~---~d~lv~   78 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDSI---PSTVVH   78 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSSC---CSEEEE
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhhc---CCEEEE
Confidence            68999999999999999999999999999999999988888888888999999999999999988876543   499999


Q ss_pred             CCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHHHHHHH
Q 024145           96 NAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVK  175 (272)
Q Consensus        96 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~~~  175 (272)
                      |||....  .++.+.+.++|++.+++|+.+++.++++++|+|.+++ ++||++||..+..+.+....|++||+|+++|++
T Consensus        79 ~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~  155 (230)
T 3guy_A           79 SAGSGYF--GLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQP-VNVVMIMSTAAQQPKAQESTYCAVKWAVKGLIE  155 (230)
T ss_dssp             CCCCCCC--SCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC-CEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHH
T ss_pred             eCCcCCC--CccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEeecccCCCCCCCchhHHHHHHHHHHHH
Confidence            9998765  7788999999999999999999999999999998754 499999999999999999999999999999999


Q ss_pred             HHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhc-CCCCCccccEEEec
Q 024145          176 CLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLAS-DESSYVSGQNLVVD  254 (272)
Q Consensus       176 ~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s-~~~~~~~G~~i~~d  254 (272)
                      +++.|++++||+||+|+||+++|++.....   .        ..+ .+++.+|||+|+.++++++ +...+++|+.+..+
T Consensus       156 ~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---~--------~~~-~~~~~~~~dvA~~i~~l~~~~~~~~itg~~~~~~  223 (230)
T 3guy_A          156 SVRLELKGKPMKIIAVYPGGMATEFWETSG---K--------SLD-TSSFMSAEDAALMIHGALANIGNGYVSDITVNRE  223 (230)
T ss_dssp             HHHHHTTTSSCEEEEEEECCC----------------------------CCCHHHHHHHHHHHCCEETTEEEEEEEEEC-
T ss_pred             HHHHHHHhcCeEEEEEECCcccChHHHhcC---C--------CCC-cccCCCHHHHHHHHHHHHhCcCCCCccceeecCC
Confidence            999999999999999999999999876321   0        112 2688999999999999886 68899999999988


Q ss_pred             Ccee
Q 024145          255 GGFS  258 (272)
Q Consensus       255 gG~~  258 (272)
                      ....
T Consensus       224 ~~~~  227 (230)
T 3guy_A          224 GHHH  227 (230)
T ss_dssp             ----
T ss_pred             CCCC
Confidence            7643

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=1.2e-42  Score=325.22  Aligned_cols=230  Identities=31%  Similarity=0.434  Sum_probs=198.6

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCc---------chHHHHHHHh---CCceEEEEecCCCHHHHHH
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQD---------KLGEDLADKL---GQDVCYIHCDISNEDEVIN   78 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~---------~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~   78 (272)
                      .+++||++|||||++|||++++++|+++|++|++++|+.         +..++..+++   +.+.   .+|++|.+++++
T Consensus         4 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~---~~d~~d~~~~~~   80 (604)
T 2et6_A            4 VDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVA---VADYNNVLDGDK   80 (604)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEE---EEECCCTTCHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeE---EEEcCCHHHHHH
Confidence            357999999999999999999999999999999998754         4555555544   3332   368888888999


Q ss_pred             HHHHHHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCC
Q 024145           79 LVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGL  158 (272)
Q Consensus        79 ~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~  158 (272)
                      +++++.+++|++|+||||||+...  .++.+.+.++|++++++|+.+++.++|+++|+|++++.|+||++||..+..+.+
T Consensus        81 ~v~~~~~~~G~iDiLVnNAGi~~~--~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~~  158 (604)
T 2et6_A           81 IVETAVKNFGTVHVIINNAGILRD--ASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNF  158 (604)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCC--BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCC
Confidence            999999999999999999998755  678899999999999999999999999999999887889999999999999999


Q ss_pred             CCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHH
Q 024145          159 GSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYL  238 (272)
Q Consensus       159 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  238 (272)
                      ++..|++||+|+.+|+++++.|++++||+||+|+|| ++|+|.....  ++.   .        .+..+|||++..++||
T Consensus       159 ~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~T~m~~~~~--~~~---~--------~~~~~pe~vA~~v~~L  224 (604)
T 2et6_A          159 GQANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-ARSRMTESIM--PPP---M--------LEKLGPEKVAPLVLYL  224 (604)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CCCHHHHTTS--CHH---H--------HTTCSHHHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-CcCccccccC--Chh---h--------hccCCHHHHHHHHHHH
Confidence            999999999999999999999999999999999998 6888764211  111   0        1235899999999999


Q ss_pred             hcCCCCCccccEEEecCceeec
Q 024145          239 ASDESSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       239 ~s~~~~~~~G~~i~~dgG~~~~  260 (272)
                      +++. .+++|++|.+|||....
T Consensus       225 ~s~~-~~itG~~~~vdgG~~~~  245 (604)
T 2et6_A          225 SSAE-NELTGQFFEVAAGFYAQ  245 (604)
T ss_dssp             TSSS-CCCCSCEEEEETTEEEE
T ss_pred             hCCc-ccCCCCEEEECCCeEEE
Confidence            9998 99999999999997643

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=100.00  E-value=7.8e-43  Score=303.84  Aligned_cols=247  Identities=21%  Similarity=0.242  Sum_probs=169.7

Q ss_pred             CCCCCcEEEEeCC--CChHHHHHHHHHHHcCCeEEEeecCc-----------chHH-----------HHHHHhCC-----
Q 024145           11 KRLEGKVAIITGG--ASGIGAMAVELFHENGAKVVIADVQD-----------KLGE-----------DLADKLGQ-----   61 (272)
Q Consensus        11 ~~l~~k~vlItGa--s~giG~aia~~la~~G~~V~~~~r~~-----------~~~~-----------~~~~~~~~-----   61 (272)
                      ++++||++|||||  ++|||++++++|+++|++|++++|++           +..+           ++.+++..     
T Consensus         5 ~~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (319)
T 2ptg_A            5 VDLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDL   84 (319)
T ss_dssp             CCCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------
T ss_pred             cccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccccc
Confidence            3478999999999  89999999999999999999998752           1111           11122211     


Q ss_pred             -ceEEEEecC------------CC--------HHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHH
Q 024145           62 -DVCYIHCDI------------SN--------EDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLIN  120 (272)
Q Consensus        62 -~~~~~~~D~------------~~--------~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~  120 (272)
                       ...++.+|+            ++        .++++++++++.+++|++|+||||||+......++.+.+.++|+++++
T Consensus        85 ~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~  164 (319)
T 2ptg_A           85 VFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVS  164 (319)
T ss_dssp             CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHH
T ss_pred             cccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHh
Confidence             124444442            22        458999999999999999999999997642226778899999999999


Q ss_pred             HHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCC-chhhhhHHHHHHHHHHHHHHhcC-CCcEEEEEeCCcccC
Q 024145          121 VNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGS-PAYTISKYGILGLVKCLAAELGQ-YGIRVNCVSPYGLAT  198 (272)
Q Consensus       121 ~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~-~~Y~~sK~a~~~~~~~la~e~~~-~gi~v~~i~Pg~v~t  198 (272)
                      +|+.+++.++++++|+|.+  .|+||++||..+..+.+++ ..|++||+|+++|+++++.|+++ +||+||+|+||+++|
T Consensus       165 vN~~g~~~l~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T  242 (319)
T 2ptg_A          165 SSSYSFVSLLQHFLPLMKE--GGSALALSYIASEKVIPGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLKS  242 (319)
T ss_dssp             HHTHHHHHHHHHHGGGEEE--EEEEEEEEECC------------------THHHHHHHHHHHHHHHCCEEEEEEECCCC-
T ss_pred             HhhHHHHHHHHHHHHHHhc--CceEEEEeccccccccCccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCCccC
Confidence            9999999999999999975  3999999999998888887 69999999999999999999985 899999999999999


Q ss_pred             CcccCCCCC-hh----HHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccccEEEecCceeec
Q 024145          199 GMSMKGGVD-PA----LIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       199 ~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~  260 (272)
                      ++....... .+    ...+......++ +++.+|||+|++++||+++.+.+++|++|.+|||+.+.
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~~~  308 (319)
T 2ptg_A          243 RAASAIGKAGDKTFIDLAIDYSEANAPL-QKELESDDVGRAALFLLSPLARAVTGATLYVDNGLHAM  308 (319)
T ss_dssp             -------------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTCTTC
T ss_pred             hhhhhcccccchhhHHHHHHHHhccCCC-CCCCCHHHHHHHHHHHhCcccCCccCCEEEECCCceee
Confidence            987532110 00    000111122333 78899999999999999999999999999999998764

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=100.00  E-value=8.1e-42  Score=287.73  Aligned_cols=230  Identities=20%  Similarity=0.230  Sum_probs=196.7

Q ss_pred             CccCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHH
Q 024145            7 AAPFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus         7 ~~~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (272)
                      +.+..+..+|++|||||++|||++++++|+++|++|++++|+.+..+         -..+.+|++|.++++++++++.++
T Consensus        14 ~~~~~~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~---------~~~~~~d~~d~~~v~~~~~~~~~~   84 (251)
T 3orf_A           14 LVPRGSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA---------DHSFTIKDSGEEEIKSVIEKINSK   84 (251)
T ss_dssp             --------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS---------SEEEECSCSSHHHHHHHHHHHHTT
T ss_pred             ccccccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc---------ccceEEEeCCHHHHHHHHHHHHHH
Confidence            34456677899999999999999999999999999999999876532         246789999999999999999999


Q ss_pred             hCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhh
Q 024145           87 FGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTIS  166 (272)
Q Consensus        87 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~s  166 (272)
                      ++++|+||||||+.... ..+.+.+.+++++.+++|+.+++.++++++++|.+  .|+||++||..+..+.++...|++|
T Consensus        85 ~g~iD~li~~Ag~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~~s  161 (251)
T 3orf_A           85 SIKVDTFVCAAGGWSGG-NASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQ--GGLFVLTGASAALNRTSGMIAYGAT  161 (251)
T ss_dssp             TCCEEEEEECCCCCCCB-CTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHH
T ss_pred             cCCCCEEEECCccCCCC-CcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhcc--CCEEEEEechhhccCCCCCchhHHH
Confidence            99999999999987552 23677889999999999999999999999999965  5899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhc--CCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcC-CC
Q 024145          167 KYGILGLVKCLAAELG--QYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASD-ES  243 (272)
Q Consensus       167 K~a~~~~~~~la~e~~--~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~-~~  243 (272)
                      |+|++.|+++++.|++  ++||++|+|+||+++|++....          . ...+ .+++.+|+|+|+++++++++ ..
T Consensus       162 Kaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~~~~----------~-~~~~-~~~~~~~~dva~~i~~l~~~~~~  229 (251)
T 3orf_A          162 KAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTNRKY----------M-SDAN-FDDWTPLSEVAEKLFEWSTNSDS  229 (251)
T ss_dssp             HHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHHHHH----------C-TTSC-GGGSBCHHHHHHHHHHHHHCGGG
T ss_pred             HHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcchhhh----------c-cccc-ccccCCHHHHHHHHHHHhcCccc
Confidence            9999999999999987  8899999999999999886421          1 1112 26788999999999999998 88


Q ss_pred             CCccccEEEecCceeec
Q 024145          244 SYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       244 ~~~~G~~i~~dgG~~~~  260 (272)
                      .+++|++|.+++|....
T Consensus       230 ~~~tG~~i~v~~g~~~~  246 (251)
T 3orf_A          230 RPTNGSLVKFETKSKVT  246 (251)
T ss_dssp             CCCTTCEEEEEEETTEE
T ss_pred             cCCcceEEEEecCCccc
Confidence            99999999999886543

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=100.00  E-value=5.2e-42  Score=287.16  Aligned_cols=224  Identities=15%  Similarity=0.129  Sum_probs=196.6

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHh--CCc
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKF--GKL   90 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g~i   90 (272)
                      .++|++|||||++|||++++++|+++|++|++++|+++..+       ....++.+|++|+++++++++++.+++  +++
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-------~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~i   77 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA-------SASVIVKMTDSFTEQADQVTAEVGKLLGDQKV   77 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS-------SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc-------CCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCC
Confidence            46899999999999999999999999999999999876532       245778899999999999999999999  799


Q ss_pred             cEEEeCCCCCCCCCCCC-CCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHH
Q 024145           91 DIMYNNAGILDRSFGSI-LDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYG  169 (272)
Q Consensus        91 d~lv~~ag~~~~~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a  169 (272)
                      |+||||||....  .++ .+.+.++|++.+++|+.+++.++++++|+|.+  .|+||++||..+..+.++...|++||+|
T Consensus        78 D~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asK~a  153 (241)
T 1dhr_A           78 DAILCVAGGWAG--GNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE--GGLLTLAGAKAALDGTPGMIGYGMAKGA  153 (241)
T ss_dssp             EEEEECCCCCCC--BCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHHHH
T ss_pred             CEEEEcccccCC--CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc--CCEEEEECCHHHccCCCCchHHHHHHHH
Confidence            999999998754  556 77889999999999999999999999999965  4899999999999999999999999999


Q ss_pred             HHHHHHHHHHHhc--CCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCcc
Q 024145          170 ILGLVKCLAAELG--QYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVS  247 (272)
Q Consensus       170 ~~~~~~~la~e~~--~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  247 (272)
                      ++.|+++++.|++  ++||++|+|+||+++|++......  .         ... .+..+|+|+|+.+++++++...+++
T Consensus       154 ~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~~~~~~--~---------~~~-~~~~~~~~vA~~v~~l~~~~~~~~~  221 (241)
T 1dhr_A          154 VHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMP--E---------ADF-SSWTPLEFLVETFHDWITGNKRPNS  221 (241)
T ss_dssp             HHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHST--T---------SCG-GGSEEHHHHHHHHHHHHTTTTCCCT
T ss_pred             HHHHHHHHHHHhccCCCCeEEEEEecCcccCccccccCc--c---------hhh-ccCCCHHHHHHHHHHHhcCCCcCcc
Confidence            9999999999999  899999999999999998642100  0         011 3456799999999999999999999


Q ss_pred             ccEEEecCceee
Q 024145          248 GQNLVVDGGFSV  259 (272)
Q Consensus       248 G~~i~~dgG~~~  259 (272)
                      |+++.+|||...
T Consensus       222 G~~~~v~g~~~~  233 (241)
T 1dhr_A          222 GSLIQVVTTDGK  233 (241)
T ss_dssp             TCEEEEEEETTE
T ss_pred             ceEEEEeCCCCc
Confidence            999999998653

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=100.00  E-value=8.7e-41  Score=278.25  Aligned_cols=227  Identities=25%  Similarity=0.348  Sum_probs=192.9

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      .+|++|||||+||||++++++|+++|++|++++|+++..+++.++++ ++.++.+|++|.++++++++++.+.++++|+|
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l   82 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELE-GALPLPGDVREEGDWARAVAAMEEAFGELSAL   82 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST-TCEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh-hceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            57899999999999999999999999999999999887777766664 68899999999999999999999999999999


Q ss_pred             EeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHHHHH
Q 024145           94 YNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGL  173 (272)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~  173 (272)
                      |||||....  .++.+.+.++|++.+++|+.+++.+++.+++.|.+++.++||++||..+..+.++...|++||++++.+
T Consensus        83 i~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (234)
T 2ehd_A           83 VNNAGVGVM--KPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFGLLGL  160 (234)
T ss_dssp             EECCCCCCC--SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHH
T ss_pred             EECCCcCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCCCCCchhhHHHHHHHHH
Confidence            999998654  667888999999999999999999999999999887889999999999988888999999999999999


Q ss_pred             HHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccccEEEe
Q 024145          174 VKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVV  253 (272)
Q Consensus       174 ~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~  253 (272)
                      +++++.|++++||++++|+||+++|++....   +.   . .        ...+|+|+|++++++++++..+++|+.+..
T Consensus       161 ~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~---~-~--------~~~~~~dvA~~~~~l~~~~~~~~~g~~~~~  225 (234)
T 2ehd_A          161 AGAAMLDLREANVRVVNVLPGSVDTGFAGNT---PG---Q-A--------WKLKPEDVAQAVLFALEMPGHAMVSEIELR  225 (234)
T ss_dssp             HHHHHHHHGGGTEEEEEEECC-------------------------------CCHHHHHHHHHHHHHSCCSSCCCEEECC
T ss_pred             HHHHHHHHhhcCcEEEEEEeCCCcCCccccc---cc---c-c--------CCCCHHHHHHHHHHHhCCCcccccceEEEe
Confidence            9999999999999999999999999986521   11   0 0        136999999999999999999999998776


Q ss_pred             cCcee
Q 024145          254 DGGFS  258 (272)
Q Consensus       254 dgG~~  258 (272)
                      ++...
T Consensus       226 ~~~~~  230 (234)
T 2ehd_A          226 PTRPT  230 (234)
T ss_dssp             C----
T ss_pred             ecCCC
Confidence            65443

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=100.00  E-value=2.3e-41  Score=292.33  Aligned_cols=230  Identities=27%  Similarity=0.444  Sum_probs=195.1

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (272)
                      |.+++||++|||||++|||++++++|+++|++|++++|+.+..++..+++   +.++.++.+|++|.++++++++++.++
T Consensus        26 m~~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  105 (301)
T 3tjr_A           26 LSGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRL  105 (301)
T ss_dssp             CCCSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             HhccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence            55689999999999999999999999999999999999998887776655   568999999999999999999999999


Q ss_pred             hCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCC-CceEEEEecccccccCCCCchhhh
Q 024145           87 FGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ-KGCILFTASACTEIAGLGSPAYTI  165 (272)
Q Consensus        87 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~Y~~  165 (272)
                      ++++|+||||||+...  +++.+.+.++|++++++|+.+++.++++++|+|.+++ .|+||++||..+..+.++...|++
T Consensus       106 ~g~id~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  183 (301)
T 3tjr_A          106 LGGVDVVFSNAGIVVA--GPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGV  183 (301)
T ss_dssp             HSSCSEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTTBHHHHH
T ss_pred             CCCCCEEEECCCcCCC--CCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCchHHHH
Confidence            9999999999998765  6788999999999999999999999999999998766 799999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCC-h---h---HHHHHHhhcCCCCCCCCChHhHHHHHHHH
Q 024145          166 SKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVD-P---A---LIESSMSQMGNLKGEFLKTDGIANAALYL  238 (272)
Q Consensus       166 sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~-~---~---~~~~~~~~~~~~~~~~~~~~dva~~~~~l  238 (272)
                      ||+|+++|+++++.|++++||+|++|+||+++|++....... .   .   .....+.. .+....+.+|||+|+.++..
T Consensus       184 sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~pedvA~~i~~~  262 (301)
T 3tjr_A          184 AKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGP-LPTQDESVSADDVARLTADA  262 (301)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHHHC-----------------------CCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcccCcEEEEEECCccccccccccccccchhhccccChhhhccc-cccccCCCCHHHHHHHHHHH
Confidence            999999999999999999999999999999999987521000 0   0   00000000 11124578999999999998


Q ss_pred             hcCC
Q 024145          239 ASDE  242 (272)
Q Consensus       239 ~s~~  242 (272)
                      +...
T Consensus       263 l~~~  266 (301)
T 3tjr_A          263 ILAN  266 (301)
T ss_dssp             HHHT
T ss_pred             HhcC
Confidence            8643

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=9.2e-42  Score=284.74  Aligned_cols=224  Identities=19%  Similarity=0.220  Sum_probs=195.0

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHh--CCc
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKF--GKL   90 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g~i   90 (272)
                      |++|++|||||++|||++++++|+++|++|++++|+++..+       ....++.+|++|+++++++++++.+++  +++
T Consensus         1 m~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~-------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~i   73 (236)
T 1ooe_A            1 MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA-------DSNILVDGNKNWTEQEQSILEQTASSLQGSQV   73 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS-------SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc-------cccEEEeCCCCCHHHHHHHHHHHHHHhCCCCC
Confidence            46899999999999999999999999999999999876532       245778899999999999999999999  799


Q ss_pred             cEEEeCCCCCCCCCCCC-CCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHH
Q 024145           91 DIMYNNAGILDRSFGSI-LDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYG  169 (272)
Q Consensus        91 d~lv~~ag~~~~~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a  169 (272)
                      |+||||||....  .++ .+.+.++|++.+++|+.+++.++++++++|.+  .|+||++||..+..+.++...|++||++
T Consensus        74 d~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~~sK~a  149 (236)
T 1ooe_A           74 DGVFCVAGGWAG--GSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP--GGLLQLTGAAAAMGPTPSMIGYGMAKAA  149 (236)
T ss_dssp             EEEEECCCCCCC--BCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHHHH
T ss_pred             CEEEECCcccCC--CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEECchhhccCCCCcHHHHHHHHH
Confidence            999999998654  456 67889999999999999999999999999964  5899999999999999999999999999


Q ss_pred             HHHHHHHHHHHhc--CCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHH-HHhcCCCCCc
Q 024145          170 ILGLVKCLAAELG--QYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAAL-YLASDESSYV  246 (272)
Q Consensus       170 ~~~~~~~la~e~~--~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~-~l~s~~~~~~  246 (272)
                      +++|+++++.|++  ++||++|+|+||+++|++.....          .. .. ..++.+|+|+|+.++ ++++++..++
T Consensus       150 ~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~----------~~-~~-~~~~~~~~dvA~~i~~~l~s~~~~~~  217 (236)
T 1ooe_A          150 VHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWM----------PN-AD-HSSWTPLSFISEHLLKWTTETSSRPS  217 (236)
T ss_dssp             HHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHS----------TT-CC-GGGCBCHHHHHHHHHHHHHCGGGCCC
T ss_pred             HHHHHHHHHHHhcccCCCeEEEEEecCcccCcchhhcC----------CC-cc-ccccCCHHHHHHHHHHHHcCCCcccc
Confidence            9999999999998  89999999999999999864210          00 01 135578999999998 5558888999


Q ss_pred             cccEEEecCceee
Q 024145          247 SGQNLVVDGGFSV  259 (272)
Q Consensus       247 ~G~~i~~dgG~~~  259 (272)
                      +|++|.+|||...
T Consensus       218 ~G~~~~v~gg~~~  230 (236)
T 1ooe_A          218 SGALLKITTENGT  230 (236)
T ss_dssp             TTCEEEEEEETTE
T ss_pred             cccEEEEecCCCc
Confidence            9999999999653

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=100.00  E-value=2.3e-41  Score=294.32  Aligned_cols=232  Identities=28%  Similarity=0.390  Sum_probs=197.9

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEee---------cCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHH
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIAD---------VQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVD   81 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~---------r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   81 (272)
                      ++++||++|||||++|||++++++|+++|++|++++         |+.+..++..+++........+|+++.++++++++
T Consensus         5 ~~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~~~~~~~~~~   84 (319)
T 1gz6_A            5 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVK   84 (319)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCCHHHHHHHHH
Confidence            468999999999999999999999999999999964         45555555555542111124589999999999999


Q ss_pred             HHHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCc
Q 024145           82 TAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSP  161 (272)
Q Consensus        82 ~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  161 (272)
                      ++.++++++|+||||||+...  .++.+.+.++|+..+++|+.+++.++++++|+|.+++.|+||++||..+..+.+++.
T Consensus        85 ~~~~~~g~iD~lVnnAG~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~~~~~  162 (319)
T 1gz6_A           85 TALDTFGRIDVVVNNAGILRD--RSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQA  162 (319)
T ss_dssp             HHHHHTSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCH
T ss_pred             HHHHHcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCCH
Confidence            999999999999999998765  567888999999999999999999999999999887789999999999988888999


Q ss_pred             hhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcC
Q 024145          162 AYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASD  241 (272)
Q Consensus       162 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  241 (272)
                      .|++||+|++.|+++++.|++++||+||+|+||++ |++....  .+..   .        .++.+|+|+|+.++||+++
T Consensus       163 ~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~~~--~~~~---~--------~~~~~p~dvA~~~~~l~s~  228 (319)
T 1gz6_A          163 NYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTETV--MPED---L--------VEALKPEYVAPLVLWLCHE  228 (319)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTGGG--SCHH---H--------HHHSCGGGTHHHHHHHTST
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-ccccccc--CChh---h--------hccCCHHHHHHHHHHHhCc
Confidence            99999999999999999999999999999999998 7765421  1111   1        1236899999999999987


Q ss_pred             CCCCccccEEEecCceee
Q 024145          242 ESSYVSGQNLVVDGGFSV  259 (272)
Q Consensus       242 ~~~~~~G~~i~~dgG~~~  259 (272)
                      . .+++|++|.+|||+..
T Consensus       229 ~-~~~tG~~~~v~GG~~~  245 (319)
T 1gz6_A          229 S-CEENGGLFEVGAGWIG  245 (319)
T ss_dssp             T-CCCCSCEEEEETTEEE
T ss_pred             h-hhcCCCEEEECCCeEE
Confidence            4 5789999999999865

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=1.2e-40  Score=278.34  Aligned_cols=229  Identities=28%  Similarity=0.393  Sum_probs=195.9

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEE
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMY   94 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv   94 (272)
                      +|++|||||++|||++++++|+++|++|++++|+.+ .        .++.++.+|++|+++++++++++ ++++++|++|
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~--------~~~~~~~~D~~~~~~~~~~~~~~-~~~~~~d~li   71 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G--------EDLIYVEGDVTREEDVRRAVARA-QEEAPLFAVV   71 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S--------SSSEEEECCTTCHHHHHHHHHHH-HHHSCEEEEE
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c--------cceEEEeCCCCCHHHHHHHHHHH-HhhCCceEEE
Confidence            689999999999999999999999999999999865 1        34588999999999999999999 8889999999


Q ss_pred             eCCCCCCCCCCCCCCC----CHHHHHHHHHHHhHHHHHHHHHHHHhhcCCC---C---ceEEEEecccccccCCCCchhh
Q 024145           95 NNAGILDRSFGSILDT----PKSDLERLINVNTIGGFLGAKHAARVMVPQQ---K---GCILFTASACTEIAGLGSPAYT  164 (272)
Q Consensus        95 ~~ag~~~~~~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~---g~iv~iss~~~~~~~~~~~~Y~  164 (272)
                      ||||....  ..+.+.    +.+++++.+++|+.+++.+++++.+.|.+++   .   ++||++||..+..+.+....|+
T Consensus        72 ~~ag~~~~--~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~  149 (242)
T 1uay_A           72 SAAGVGLA--EKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYA  149 (242)
T ss_dssp             ECCCCCCC--CCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHHHH
T ss_pred             EcccccCc--ccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCchhh
Confidence            99998654  334443    4559999999999999999999999998754   3   4999999999988888999999


Q ss_pred             hhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCC
Q 024145          165 ISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESS  244 (272)
Q Consensus       165 ~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  244 (272)
                      +||++++.+++.++.|++++||++++|+||+++|++...   ..+...+.+....+..+++.+|+|+|+++++++++  .
T Consensus       150 ~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~---~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~--~  224 (242)
T 1uay_A          150 ASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQG---LPEKAKASLAAQVPFPPRLGRPEEYAALVLHILEN--P  224 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHT---SCHHHHHHHHTTCCSSCSCCCHHHHHHHHHHHHHC--T
T ss_pred             HHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhc---cchhHHHHHHhhCCCcccCCCHHHHHHHHHHHhcC--C
Confidence            999999999999999999999999999999999998763   22222222223233326789999999999999987  7


Q ss_pred             CccccEEEecCceeec
Q 024145          245 YVSGQNLVVDGGFSVV  260 (272)
Q Consensus       245 ~~~G~~i~~dgG~~~~  260 (272)
                      +++|++|.+|||..+.
T Consensus       225 ~~~G~~~~v~gG~~~~  240 (242)
T 1uay_A          225 MLNGEVVRLDGALRMA  240 (242)
T ss_dssp             TCCSCEEEESTTCCCC
T ss_pred             CCCCcEEEEcCCeecC
Confidence            8899999999998754

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=3.8e-41  Score=286.00  Aligned_cols=237  Identities=27%  Similarity=0.399  Sum_probs=197.2

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh-----CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL-----GQDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      +++|++|||||++|||++++++|+++|++|++++|+.+..++..+++     +.++.++.+|++|+++++++++++.+++
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (267)
T 2gdz_A            5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   84 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence            57899999999999999999999999999999999987766655554     2368899999999999999999999999


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCC---CceEEEEecccccccCCCCchhh
Q 024145           88 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ---KGCILFTASACTEIAGLGSPAYT  164 (272)
Q Consensus        88 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~g~iv~iss~~~~~~~~~~~~Y~  164 (272)
                      +++|+||||||...          .++|++.+++|+.+++.+++.++++|.+++   .|+||++||..+..+.+....|+
T Consensus        85 g~id~lv~~Ag~~~----------~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  154 (267)
T 2gdz_A           85 GRLDILVNNAGVNN----------EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYC  154 (267)
T ss_dssp             SCCCEEEECCCCCC----------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHH
T ss_pred             CCCCEEEECCCCCC----------hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCCCCchHH
Confidence            99999999999642          256889999999999999999999997653   68999999999999889999999


Q ss_pred             hhHHHHHHHHHHH--HHHhcCCCcEEEEEeCCcccCCcccCCCCChhHH------HHHHhhcCCCCCCCCChHhHHHHHH
Q 024145          165 ISKYGILGLVKCL--AAELGQYGIRVNCVSPYGLATGMSMKGGVDPALI------ESSMSQMGNLKGEFLKTDGIANAAL  236 (272)
Q Consensus       165 ~sK~a~~~~~~~l--a~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~dva~~~~  236 (272)
                      +||++++.+++++  +.|++++||++|+|+||+++|++..... .....      .+......+. .++.+|+|+|++++
T Consensus       155 ~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dvA~~v~  232 (267)
T 2gdz_A          155 ASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIE-KEENMGQYIEYKDHIKDMIKY-YGILDPPLIANGLI  232 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGG-CHHHHGGGGGGHHHHHHHHHH-HCCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhccc-cccccchhhhHHHHHHHHhcc-ccCCCHHHHHHHHH
Confidence            9999999999995  6899999999999999999999865311 11110      0111001111 35679999999999


Q ss_pred             HHhcCCCCCccccEEEecCceeeccCc
Q 024145          237 YLASDESSYVSGQNLVVDGGFSVVNPT  263 (272)
Q Consensus       237 ~l~s~~~~~~~G~~i~~dgG~~~~~~~  263 (272)
                      +|++++  .++|++|.+|||.......
T Consensus       233 ~l~s~~--~~~G~~~~v~gg~~~~~~~  257 (267)
T 2gdz_A          233 TLIEDD--ALNGAIMKITTSKGIHFQD  257 (267)
T ss_dssp             HHHHCT--TCSSCEEEEETTTEEEECC
T ss_pred             HHhcCc--CCCCcEEEecCCCcccccC
Confidence            999875  4899999999988665433

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=100.00  E-value=2.6e-41  Score=296.76  Aligned_cols=241  Identities=14%  Similarity=0.034  Sum_probs=200.2

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHH-cCCeEEEeecCcchH---------------HHHHHHhCCceEEEEecCCCHHHH
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHE-NGAKVVIADVQDKLG---------------EDLADKLGQDVCYIHCDISNEDEV   76 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~-~G~~V~~~~r~~~~~---------------~~~~~~~~~~~~~~~~D~~~~~~~   76 (272)
                      ..+|++|||||++|||++++++|++ +|++|++++|+.+..               ++..+..+.++..+.+|++|++++
T Consensus        45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v  124 (405)
T 3zu3_A           45 NGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIK  124 (405)
T ss_dssp             TCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHH
T ss_pred             CCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHH
Confidence            4689999999999999999999999 999999998865432               222344567889999999999999


Q ss_pred             HHHHHHHHHHhCCccEEEeCCCCCCC-----------CCCCC---------------------CCCCHHHHHHHHHHHhH
Q 024145           77 INLVDTAVSKFGKLDIMYNNAGILDR-----------SFGSI---------------------LDTPKSDLERLINVNTI  124 (272)
Q Consensus        77 ~~~~~~~~~~~g~id~lv~~ag~~~~-----------~~~~~---------------------~~~~~~~~~~~~~~n~~  124 (272)
                      +++++++.+++|++|+||||||...+           ..+++                     .+.+.++|++++++|..
T Consensus       125 ~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~~  204 (405)
T 3zu3_A          125 QLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGG  204 (405)
T ss_dssp             HHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhch
Confidence            99999999999999999999997511           11344                     77899999999999999


Q ss_pred             HHH-HHHHHHHHhhcCCCCceEEEEecccccccCCCC--chhhhhHHHHHHHHHHHHHHhcCC-CcEEEEEeCCcccCCc
Q 024145          125 GGF-LGAKHAARVMVPQQKGCILFTASACTEIAGLGS--PAYTISKYGILGLVKCLAAELGQY-GIRVNCVSPYGLATGM  200 (272)
Q Consensus       125 ~~~-~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~--~~Y~~sK~a~~~~~~~la~e~~~~-gi~v~~i~Pg~v~t~~  200 (272)
                      +.| .+++++.+.+..+++|+||++||..+..+.+.+  ..|++||+|++++++++|.|++++ ||+||+|+||++.|++
T Consensus       205 ~~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~~p~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaVaPG~i~T~~  284 (405)
T 3zu3_A          205 EDWQMWIDALLDAGVLAEGAQTTAFTYLGEKITHDIYWNGSIGAAKKDLDQKVLAIRESLAAHGGGDARVSVLKAVVSQA  284 (405)
T ss_dssp             HHHHHHHHHHHHHTCEEEEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEECCCCCCHH
T ss_pred             hHHHHHHHHHHHHhhhhCCcEEEEEeCchhhCcCCCccchHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEEeCCCcCch
Confidence            998 788887754333356999999999999998887  999999999999999999999999 9999999999999999


Q ss_pred             ccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccccEEEecCceeec
Q 024145          201 SMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~  260 (272)
                      ....... +.....+..  + .++..+|||+++.+.||+++   ++.|+.+.+|++..+.
T Consensus       285 s~~ip~~-p~y~~~l~~--~-mkr~G~~Ed~a~~i~~L~sd---~l~~~~~~~D~~~~~r  337 (405)
T 3zu3_A          285 SSAIPMM-PLYLSLLFK--V-MKEKGTHEGCIEQVYSLYKD---SLCGDSPHMDQEGRLR  337 (405)
T ss_dssp             HHTSTTH-HHHHHHHHH--H-HHHHTCCCCHHHHHHHHHHH---TTSSSCCCBCTTSCEE
T ss_pred             hhcCCCC-cHHHHHHHH--H-HhcCCCcHHHHHHHHHHHhc---cccCCCCCcCCCcCCC
Confidence            8743322 222222222  2 37889999999999999987   6688999999987774

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-40  Score=284.81  Aligned_cols=243  Identities=25%  Similarity=0.353  Sum_probs=201.5

Q ss_pred             ccCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---C--CceEEEEecCCCHHHHHHHHHH
Q 024145            8 APFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---G--QDVCYIHCDISNEDEVINLVDT   82 (272)
Q Consensus         8 ~~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~--~~~~~~~~D~~~~~~~~~~~~~   82 (272)
                      ++|.++++|++|||||++|||++++++|+++|++|++++|+.+..+++.+++   +  .++.++.+|++|++++++++++
T Consensus        25 ~~m~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~  104 (279)
T 1xg5_A           25 PGMERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSA  104 (279)
T ss_dssp             TTCGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHH
T ss_pred             ccccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHH
Confidence            3456789999999999999999999999999999999999987776665544   2  4688999999999999999999


Q ss_pred             HHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCC--ceEEEEeccccc--ccCC
Q 024145           83 AVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQK--GCILFTASACTE--IAGL  158 (272)
Q Consensus        83 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--g~iv~iss~~~~--~~~~  158 (272)
                      +.++++++|+||||||....  .++.+.+.++|++.+++|+.+++.+++.+++.|.+++.  ++||++||..+.  .+.+
T Consensus       105 ~~~~~g~iD~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~  182 (279)
T 1xg5_A          105 IRSQHSGVDICINNAGLARP--DTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLS  182 (279)
T ss_dssp             HHHHHCCCSEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCG
T ss_pred             HHHhCCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccCCCC
Confidence            99999999999999998754  67788899999999999999999999999999987653  899999999887  5666


Q ss_pred             CCchhhhhHHHHHHHHHHHHHHhc--CCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHH
Q 024145          159 GSPAYTISKYGILGLVKCLAAELG--QYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAAL  236 (272)
Q Consensus       159 ~~~~Y~~sK~a~~~~~~~la~e~~--~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  236 (272)
                      +...|++||++++.|++.++.|+.  +.||++++|+||+++|++..........  ..... .+. .++.+|+|+|++++
T Consensus       183 ~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~--~~~~~-~~~-~~~~~~~dvA~~i~  258 (279)
T 1xg5_A          183 VTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPE--KAAAT-YEQ-MKCLKPEDVAEAVI  258 (279)
T ss_dssp             GGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHH--HHHHH-HC----CBCHHHHHHHHH
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhcccChh--HHhhh-ccc-ccCCCHHHHHHHHH
Confidence            778999999999999999999998  8899999999999999985321111111  11111 122 56789999999999


Q ss_pred             HHhcCCCCCccccEEEecCc
Q 024145          237 YLASDESSYVSGQNLVVDGG  256 (272)
Q Consensus       237 ~l~s~~~~~~~G~~i~~dgG  256 (272)
                      +++++...+++|+....++|
T Consensus       259 ~l~~~~~~~~~g~i~i~~~~  278 (279)
T 1xg5_A          259 YVLSTPAHIQIGDIQMRPTG  278 (279)
T ss_dssp             HHHHSCTTEEEEEEEEEETT
T ss_pred             HHhcCCcceEeeeEEEccCC
Confidence            99998877777765544443

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=100.00  E-value=9.4e-42  Score=320.23  Aligned_cols=237  Identities=27%  Similarity=0.408  Sum_probs=187.4

Q ss_pred             CccCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeec---------CcchHHHHHHHhCCceEEEEecCCCHHHHH
Q 024145            7 AAPFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADV---------QDKLGEDLADKLGQDVCYIHCDISNEDEVI   77 (272)
Q Consensus         7 ~~~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~   77 (272)
                      +....+++||++|||||++|||++++++|+++|++|++++|         +.+..++..+++........+|+++.++++
T Consensus        11 ~~~~~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d~~~~~   90 (613)
T 3oml_A           11 SDGKLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSVIDGA   90 (613)
T ss_dssp             ----CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCEEECCCCGGGHH
T ss_pred             cccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCCHHHHH
Confidence            34567899999999999999999999999999999999987         555666666555221122358999999999


Q ss_pred             HHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccC
Q 024145           78 NLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAG  157 (272)
Q Consensus        78 ~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~  157 (272)
                      ++++++.+++|++|+||||||+...  .++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||..+..+.
T Consensus        91 ~~~~~~~~~~g~iDiLVnnAGi~~~--~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~~  168 (613)
T 3oml_A           91 KVIETAIKAFGRVDILVNNAGILRD--RSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGN  168 (613)
T ss_dssp             HHHC----------CEECCCCCCCC--CCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHCC
T ss_pred             HHHHHHHHHCCCCcEEEECCCCCCC--CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCC
Confidence            9999999999999999999998765  77889999999999999999999999999999999889999999999999999


Q ss_pred             CCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHH
Q 024145          158 LGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALY  237 (272)
Q Consensus       158 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  237 (272)
                      ++...|++||+|+++|+++++.|++++||+||+|+||++ |++....  .+...           .+..+|+|+|++++|
T Consensus       169 ~~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~-t~~~~~~--~~~~~-----------~~~~~pedvA~~v~~  234 (613)
T 3oml_A          169 FGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA-SRMTEGI--LPDIL-----------FNELKPKLIAPVVAY  234 (613)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------CCC--CCHHH-----------HTTCCGGGTHHHHHH
T ss_pred             CCChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC-Chhhhhc--cchhh-----------hhcCCHHHHHHHHHH
Confidence            999999999999999999999999999999999999975 5655421  11111           234589999999999


Q ss_pred             HhcCCCCCccccEEEecCceeec
Q 024145          238 LASDESSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       238 l~s~~~~~~~G~~i~~dgG~~~~  260 (272)
                      |+++. .+++|++|.+|||....
T Consensus       235 L~s~~-~~~tG~~i~vdGG~~~~  256 (613)
T 3oml_A          235 LCHES-CEDNGSYIESAAGWATK  256 (613)
T ss_dssp             TTSTT-CCCCSCEEEEETTEEEE
T ss_pred             hcCCC-cCCCceEEEECCCeEEE
Confidence            99988 89999999999998874

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=1e-40  Score=279.73  Aligned_cols=225  Identities=16%  Similarity=0.210  Sum_probs=192.2

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcC--CeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhC--
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENG--AKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFG--   88 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g--   88 (272)
                      |++|++|||||++|||++++++|+++|  ++|++++|+.+..+++.+..+.++.++.+|+++.++++++++++.++++  
T Consensus         1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   80 (250)
T 1yo6_A            1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSD   80 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGG
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCC
Confidence            468999999999999999999999999  9999999998877655432255799999999999999999999999998  


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCC------C-----CceEEEEecccccccC
Q 024145           89 KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQ------Q-----KGCILFTASACTEIAG  157 (272)
Q Consensus        89 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~------~-----~g~iv~iss~~~~~~~  157 (272)
                      ++|+||||||...+ ..++.+.+.+++++.+++|+.+++.++++++++|.++      +     .++||++||..+..+.
T Consensus        81 ~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~  159 (250)
T 1yo6_A           81 GLSLLINNAGVLLS-YGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITD  159 (250)
T ss_dssp             CCCEEEECCCCCCC-BCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTT
T ss_pred             CCcEEEECCcccCC-CcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccCC
Confidence            89999999998762 2677888999999999999999999999999999765      4     7899999999887765


Q ss_pred             -------CCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHh
Q 024145          158 -------LGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDG  230 (272)
Q Consensus       158 -------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  230 (272)
                             ++...|++||++++.++++++.|++++||++++|+||+++|++...                   ..+.+|+|
T Consensus       160 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-------------------~~~~~~~~  220 (250)
T 1yo6_A          160 NTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK-------------------NAALTVEQ  220 (250)
T ss_dssp             CCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC--------------------------------HH
T ss_pred             cccccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC-------------------CCCCCHHH
Confidence                   5678999999999999999999999999999999999999998641                   13478999


Q ss_pred             HHHHHHHHhcCCCCCccccEEEecCce
Q 024145          231 IANAALYLASDESSYVSGQNLVVDGGF  257 (272)
Q Consensus       231 va~~~~~l~s~~~~~~~G~~i~~dgG~  257 (272)
                      +|+.+++++++...+++|+++.+|||.
T Consensus       221 ~a~~~~~~~~~~~~~~~G~~~~~~g~~  247 (250)
T 1yo6_A          221 STAELISSFNKLDNSHNGRFFMRNLKP  247 (250)
T ss_dssp             HHHHHHHHHTTCCGGGTTCEEETTEEE
T ss_pred             HHHHHHHHHhcccccCCCeEEEECCcC
Confidence            999999999988888999999999985

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=100.00  E-value=2.4e-40  Score=288.08  Aligned_cols=231  Identities=24%  Similarity=0.361  Sum_probs=189.7

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CC--ceEEEEecCCCHHHHHHHHHHHH
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQ--DVCYIHCDISNEDEVINLVDTAV   84 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~--~~~~~~~D~~~~~~~~~~~~~~~   84 (272)
                      |.+++||++|||||++|||++++++|+++|++|++++|+.+..++..+++   +.  ++.++.+|+++.++++++++++.
T Consensus         3 m~~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   82 (319)
T 3ioy_A            3 LKDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVE   82 (319)
T ss_dssp             CCCCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            56789999999999999999999999999999999999998877766654   33  79999999999999999999999


Q ss_pred             HHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCC------CCceEEEEecccccccCC
Q 024145           85 SKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQ------QKGCILFTASACTEIAGL  158 (272)
Q Consensus        85 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~------~~g~iv~iss~~~~~~~~  158 (272)
                      +.++++|+||||||+...  +++.+.+.+++++++++|+.+++.++++++|+|.++      +.|+||++||..+..+.+
T Consensus        83 ~~~g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~  160 (319)
T 3ioy_A           83 ARFGPVSILCNNAGVNLF--QPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAG  160 (319)
T ss_dssp             HHTCCEEEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCS
T ss_pred             HhCCCCCEEEECCCcCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCC
Confidence            999999999999998765  788899999999999999999999999999999764      589999999999999999


Q ss_pred             CCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHH--------HhhcCCCCCCCCChHh
Q 024145          159 GSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESS--------MSQMGNLKGEFLKTDG  230 (272)
Q Consensus       159 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~d  230 (272)
                      +...|++||+|+++|+++++.|+.++||++++|+||+|+|++.......+......        ...........++|++
T Consensus       161 ~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~  240 (319)
T 3ioy_A          161 SPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGVHEFGMEPDV  240 (319)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-----------------------------CCGGGSSBCHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchhhcccccchhHHHHHHHHHhhhcCCCHHH
Confidence            99999999999999999999999999999999999999999876432211111110        0111111112379999


Q ss_pred             HHHHHHHHhcCC
Q 024145          231 IANAALYLASDE  242 (272)
Q Consensus       231 va~~~~~l~s~~  242 (272)
                      +|+.++..+...
T Consensus       241 vA~~~~~al~~~  252 (319)
T 3ioy_A          241 IGARVIEAMKAN  252 (319)
T ss_dssp             HHHHHHHHHHTT
T ss_pred             HHHHHHHHHHcC
Confidence            999999988654

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=100.00  E-value=1.3e-40  Score=280.71  Aligned_cols=230  Identities=18%  Similarity=0.159  Sum_probs=192.1

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCe-EEEeecCcc--hHHHHHHHh-CCceEEEEecCCCH-HHHHHHHHHHHHH
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAK-VVIADVQDK--LGEDLADKL-GQDVCYIHCDISNE-DEVINLVDTAVSK   86 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~-V~~~~r~~~--~~~~~~~~~-~~~~~~~~~D~~~~-~~~~~~~~~~~~~   86 (272)
                      +++||++|||||++|||++++++|+++|++ |++++|+..  ..+++.+.. +.++.++.+|++|+ ++++++++++.++
T Consensus         2 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (254)
T 1sby_A            2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQ   81 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHh
Confidence            578999999999999999999999999996 999999863  333443333 35789999999998 9999999999999


Q ss_pred             hCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCC---CceEEEEecccccccCCCCchh
Q 024145           87 FGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ---KGCILFTASACTEIAGLGSPAY  163 (272)
Q Consensus        87 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~g~iv~iss~~~~~~~~~~~~Y  163 (272)
                      ++++|+||||||..          +.+++++.+++|+.+++.++++++|+|.+++   .|+||++||..+..+.+....|
T Consensus        82 ~g~id~lv~~Ag~~----------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  151 (254)
T 1sby_A           82 LKTVDILINGAGIL----------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVY  151 (254)
T ss_dssp             HSCCCEEEECCCCC----------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHHH
T ss_pred             cCCCCEEEECCccC----------CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCCCchHH
Confidence            99999999999974          2367899999999999999999999997654   6899999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCC---hhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhc
Q 024145          164 TISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVD---PALIESSMSQMGNLKGEFLKTDGIANAALYLAS  240 (272)
Q Consensus       164 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  240 (272)
                      ++||++++.|+++++.++.++||++++|+||+++|++.......   .+...... ..    ..+.+|||+|++++++++
T Consensus       152 ~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~dvA~~i~~~~~  226 (254)
T 1sby_A          152 SASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELL-LS----HPTQTSEQCGQNFVKAIE  226 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHH-TT----SCCEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHHHHHHH-hc----CCCCCHHHHHHHHHHHHH
Confidence            99999999999999999988899999999999999987532110   11111111 11    234589999999999986


Q ss_pred             CCCCCccccEEEecCceee
Q 024145          241 DESSYVSGQNLVVDGGFSV  259 (272)
Q Consensus       241 ~~~~~~~G~~i~~dgG~~~  259 (272)
                         .+++|+++.+|||...
T Consensus       227 ---~~~~G~~~~v~gG~~~  242 (254)
T 1sby_A          227 ---ANKNGAIWKLDLGTLE  242 (254)
T ss_dssp             ---HCCTTCEEEEETTEEE
T ss_pred             ---cCCCCCEEEEeCCcee
Confidence               4679999999999744

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=100.00  E-value=2.8e-41  Score=299.15  Aligned_cols=242  Identities=17%  Similarity=0.053  Sum_probs=196.9

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHH-cCCeEEEeecCcchHH---------------HHHHHhCCceEEEEecCCCHHHHH
Q 024145           14 EGKVAIITGGASGIGAMAVELFHE-NGAKVVIADVQDKLGE---------------DLADKLGQDVCYIHCDISNEDEVI   77 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~-~G~~V~~~~r~~~~~~---------------~~~~~~~~~~~~~~~D~~~~~~~~   77 (272)
                      .+|++|||||++|||++++++|++ +|++|++++|+.+..+               +..+..+.++..+.+|++++++++
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~  139 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARA  139 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHH
Confidence            589999999999999999999999 9999999998765432               233445778999999999999999


Q ss_pred             HHHHHHHHHh-CCccEEEeCCCCCC-----------CCCCCC---------------------CCCCHHHHHHHHHHHhH
Q 024145           78 NLVDTAVSKF-GKLDIMYNNAGILD-----------RSFGSI---------------------LDTPKSDLERLINVNTI  124 (272)
Q Consensus        78 ~~~~~~~~~~-g~id~lv~~ag~~~-----------~~~~~~---------------------~~~~~~~~~~~~~~n~~  124 (272)
                      ++++++.+++ |++|+||||||...           ....++                     .+.+.++|++++++|..
T Consensus       140 ~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~~  219 (422)
T 3s8m_A          140 QVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGG  219 (422)
T ss_dssp             HHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhch
Confidence            9999999999 99999999999731           011233                     36799999999999999


Q ss_pred             HHH-HHHHHHHHhhcCCCCceEEEEecccccccCCCC--chhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcc
Q 024145          125 GGF-LGAKHAARVMVPQQKGCILFTASACTEIAGLGS--PAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMS  201 (272)
Q Consensus       125 ~~~-~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~--~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~  201 (272)
                      +.| .+++++.+.+..+++|+||++||..+..+.+.+  ..|++||+|+++|++++|.|++++||+||+|+||+++|++.
T Consensus       220 ~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~p~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaPG~i~T~~~  299 (422)
T 3s8m_A          220 QDWELWIDALEGAGVLADGARSVAFSYIGTEITWPIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVTQAS  299 (422)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGHHHHTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTG
T ss_pred             hHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccCCCccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEcCCCcChhh
Confidence            987 888887765443457999999999998887765  89999999999999999999999999999999999999998


Q ss_pred             cCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCcc-ccEEEecCceeec
Q 024145          202 MKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVS-GQNLVVDGGFSVV  260 (272)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~-G~~i~~dgG~~~~  260 (272)
                      ...... +.......  .+ .++..+|||+++.+.||+++.- |.+ |+...+|++..+.
T Consensus       300 ~~ip~~-~~~~~~~~--~~-m~r~G~pEdva~~v~~L~sd~l-y~~~~~~~~~d~~~~~r  354 (422)
T 3s8m_A          300 AAIPVM-PLYISMVY--KI-MKEKGLHEGTIEQLDRLFRERL-YRQDGQPAEVDEQNRLR  354 (422)
T ss_dssp             GGSTHH-HHHHHHHH--HH-HHHTTCCCCHHHHHHHHHHHTT-TCTTCCCCCCCTTSCEE
T ss_pred             hcCCCC-hHHHHHHH--hh-hcCCcChHHHHHHHHHHhcchh-hccCCCCcccCCCCCCc
Confidence            743211 11111111  12 3788999999999999998854 554 7777688887763

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=100.00  E-value=2.7e-39  Score=274.24  Aligned_cols=229  Identities=21%  Similarity=0.198  Sum_probs=198.4

Q ss_pred             cCCCCCCcEEEEeCCCChHHHHHHHHHHHcC---CeEEEeecCcchHHHHHH--HhCCceEEEEecCCCHHHHHHHHHHH
Q 024145            9 PFKRLEGKVAIITGGASGIGAMAVELFHENG---AKVVIADVQDKLGEDLAD--KLGQDVCYIHCDISNEDEVINLVDTA   83 (272)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~aia~~la~~G---~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~   83 (272)
                      +..++++|++|||||++|||++++++|+++|   ++|++++|+.+..+.+.+  ..+.++.++.+|+++.++++++++++
T Consensus        15 ~~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~   94 (267)
T 1sny_A           15 VPRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADI   94 (267)
T ss_dssp             -----CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHH
Confidence            4566899999999999999999999999999   999999998776544322  12568999999999999999999999


Q ss_pred             HHHhC--CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCC------C-----CceEEEEec
Q 024145           84 VSKFG--KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQ------Q-----KGCILFTAS  150 (272)
Q Consensus        84 ~~~~g--~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~------~-----~g~iv~iss  150 (272)
                      .+.++  ++|+||||||.... ..++.+.+.+++++.+++|+.+++.+++++++.|.++      +     .++||++||
T Consensus        95 ~~~~g~~~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS  173 (267)
T 1sny_A           95 EGVTKDQGLNVLFNNAGIAPK-SARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSS  173 (267)
T ss_dssp             HHHHGGGCCSEEEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECC
T ss_pred             HHhcCCCCccEEEECCCcCCC-ccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEec
Confidence            99998  89999999998762 2667888999999999999999999999999999764      3     689999999


Q ss_pred             ccccccCC---CCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCC
Q 024145          151 ACTEIAGL---GSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLK  227 (272)
Q Consensus       151 ~~~~~~~~---~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (272)
                      ..+..+.+   +...|++||++++.|++.++.|++++||++++|+||+++|++...                   ....+
T Consensus       174 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-------------------~~~~~  234 (267)
T 1sny_A          174 ILGSIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS-------------------SAPLD  234 (267)
T ss_dssp             GGGCSTTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT-------------------TCSBC
T ss_pred             ccccccCCCCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC-------------------CCCCC
Confidence            98877653   677899999999999999999999999999999999999998641                   13478


Q ss_pred             hHhHHHHHHHHhcCCCCCccccEEEecCce
Q 024145          228 TDGIANAALYLASDESSYVSGQNLVVDGGF  257 (272)
Q Consensus       228 ~~dva~~~~~l~s~~~~~~~G~~i~~dgG~  257 (272)
                      |+++|+.++++++.....++|++|.+||+.
T Consensus       235 ~~~~a~~~~~~~~~~~~~~~G~~~~~~g~~  264 (267)
T 1sny_A          235 VPTSTGQIVQTISKLGEKQNGGFVNYDGTP  264 (267)
T ss_dssp             HHHHHHHHHHHHHHCCGGGTTCEECTTSCB
T ss_pred             HHHHHHHHHHHHHhcCcCCCCcEEccCCcC
Confidence            999999999999888888999999999985

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.9e-39  Score=282.77  Aligned_cols=240  Identities=18%  Similarity=0.229  Sum_probs=185.7

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCc-----chHHHHHH---HhCCceEEEEecCCCHHHHHHHHHHH
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQD-----KLGEDLAD---KLGQDVCYIHCDISNEDEVINLVDTA   83 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~-----~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~   83 (272)
                      ++++|++|||||++|||++++++|+++|++|++++|+.     +..+++.+   ..+.++.++.+|++|+++++++++++
T Consensus         2 ~m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~   81 (324)
T 3u9l_A            2 VMSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQI   81 (324)
T ss_dssp             ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHH
Confidence            46789999999999999999999999999999988762     33333333   33678999999999999999999999


Q ss_pred             HHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccc-cCCCCch
Q 024145           84 VSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEI-AGLGSPA  162 (272)
Q Consensus        84 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~-~~~~~~~  162 (272)
                      .+++|++|+||||||+...  +++.+.+.++|++++++|+.+++.++++++|+|.+++.|+||++||..+.. +.++...
T Consensus        82 ~~~~g~iD~lVnnAG~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~~~~~~~  159 (324)
T 3u9l_A           82 IGEDGRIDVLIHNAGHMVF--GPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPPYLAP  159 (324)
T ss_dssp             HHHHSCCSEEEECCCCCBC--SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCCSSCHH
T ss_pred             HHHcCCCCEEEECCCcCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCCCCcchh
Confidence            9999999999999998765  778899999999999999999999999999999988889999999998874 4567788


Q ss_pred             hhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCC--C-hhHHHHH-------------HhhcCCCCCCCC
Q 024145          163 YTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGV--D-PALIESS-------------MSQMGNLKGEFL  226 (272)
Q Consensus       163 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~--~-~~~~~~~-------------~~~~~~~~~~~~  226 (272)
                      |++||+|+++|+++++.|++++||+|++|+||+++|++......  . .......             ......+.....
T Consensus       160 Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  239 (324)
T 3u9l_A          160 YFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEAGPNAGLGEEIKKAFAAIVPPDA  239 (324)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---------CBCCSCHHHHHHHHHTTTTTHHHHHHHHHHHTSCTTC
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchhhcccCCchHHHHHHhhccccccCCHHHHHHHHHHhcCCCC
Confidence            99999999999999999999999999999999999876432111  0 0100000             001111112336


Q ss_pred             ChHhHHHHHHHHhcCCCCCccccEEEec
Q 024145          227 KTDGIANAALYLASDESSYVSGQNLVVD  254 (272)
Q Consensus       227 ~~~dva~~~~~l~s~~~~~~~G~~i~~d  254 (272)
                      +|+++|++++.++..... .....+.++
T Consensus       240 ~p~~vA~aiv~~~~~~~~-~~~~~~~~g  266 (324)
T 3u9l_A          240 DVSLVADAIVRVVGTASG-KRPFRVHVD  266 (324)
T ss_dssp             CTHHHHHHHHHHHTSCTT-CCCSEEEEC
T ss_pred             CHHHHHHHHHHHhcCCCC-CCCeEEEeC
Confidence            889999999998865421 234566665

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=100.00  E-value=1.4e-38  Score=275.12  Aligned_cols=223  Identities=23%  Similarity=0.266  Sum_probs=186.5

Q ss_pred             cCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh----CCceEEEEecCCCH-HHHHHHHHHH
Q 024145            9 PFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL----GQDVCYIHCDISNE-DEVINLVDTA   83 (272)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~-~~~~~~~~~~   83 (272)
                      ++..+++|++|||||++|||++++++|+++|++|++++|+.+..++..+++    +.++.++.+|+++. ++++++++.+
T Consensus         6 ~~~~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~   85 (311)
T 3o26_A            6 PNTVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFI   85 (311)
T ss_dssp             ------CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHH
T ss_pred             CCccCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHH
Confidence            345678999999999999999999999999999999999988877766655    34799999999998 9999999999


Q ss_pred             HHHhCCccEEEeCCCCCCC----------------------------CCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHH
Q 024145           84 VSKFGKLDIMYNNAGILDR----------------------------SFGSILDTPKSDLERLINVNTIGGFLGAKHAAR  135 (272)
Q Consensus        84 ~~~~g~id~lv~~ag~~~~----------------------------~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  135 (272)
                      .++++++|+||||||+...                            ....+.+.+.+++++.+++|+.+++.+++.++|
T Consensus        86 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  165 (311)
T 3o26_A           86 KTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIP  165 (311)
T ss_dssp             HHHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             HHhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhH
Confidence            9999999999999998642                            112456778999999999999999999999999


Q ss_pred             hhcCCCCceEEEEecccccccC-------------------------------------------CCCchhhhhHHHHHH
Q 024145          136 VMVPQQKGCILFTASACTEIAG-------------------------------------------LGSPAYTISKYGILG  172 (272)
Q Consensus       136 ~~~~~~~g~iv~iss~~~~~~~-------------------------------------------~~~~~Y~~sK~a~~~  172 (272)
                      +|.+++.|+||++||..+..+.                                           ++...|++||+|+++
T Consensus       166 ~l~~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~  245 (311)
T 3o26_A          166 LLQLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNA  245 (311)
T ss_dssp             HHTTSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHH
T ss_pred             hhccCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHH
Confidence            9998888999999999876543                                           355689999999999


Q ss_pred             HHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccccEEE
Q 024145          173 LVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLV  252 (272)
Q Consensus       173 ~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~  252 (272)
                      |+++++.|+.+  |+||+|+||+++|++...                   ....+|++.++.+++++.......+|.++.
T Consensus       246 ~~~~la~e~~~--i~v~~v~PG~v~T~~~~~-------------------~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~  304 (311)
T 3o26_A          246 YTRVLANKIPK--FQVNCVCPGLVKTEMNYG-------------------IGNYTAEEGAEHVVRIALFPDDGPSGFFYD  304 (311)
T ss_dssp             HHHHHHHHCTT--SEEEEECCCSBCSGGGTT-------------------CCSBCHHHHHHHHHHHHTCCSSCCCSCEET
T ss_pred             HHHHHHhhcCC--ceEEEecCCceecCCcCC-------------------CCCCCHHHHHHHHHHHHhCCCCCCCceEec
Confidence            99999999864  999999999999998762                   122589999999999886554444555543

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=100.00  E-value=3.2e-40  Score=276.88  Aligned_cols=225  Identities=21%  Similarity=0.217  Sum_probs=162.6

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   91 (272)
                      +++||++|||||++|||++++++|++ |++|++++|+++..+++.+  ..++.++.+|+++.++ .+.+.+..++++++|
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~-~~~~~~~~~~~~~id   77 (245)
T 3e9n_A            2 SLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE--IEGVEPIESDIVKEVL-EEGGVDKLKNLDHVD   77 (245)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT--STTEEEEECCHHHHHH-TSSSCGGGTTCSCCS
T ss_pred             CCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh--hcCCcceecccchHHH-HHHHHHHHHhcCCCC
Confidence            57899999999999999999999998 9999999999887776655  2468899999998877 444555556778999


Q ss_pred             EEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHHH
Q 024145           92 IMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGIL  171 (272)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~  171 (272)
                      +||||||....  .++.+.+.++|++.+++|+.+++.++++++|.|.+++ |+||++||..+..+.++...|++||+|++
T Consensus        78 ~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~a~~  154 (245)
T 3e9n_A           78 TLVHAAAVARD--TTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-GCVIYINSGAGNGPHPGNTIYAASKHALR  154 (245)
T ss_dssp             EEEECC------------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC----------CHHHHHHHHHHH
T ss_pred             EEEECCCcCCC--CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEcCcccccCCCCchHHHHHHHHHH
Confidence            99999998765  6788889999999999999999999999999997644 99999999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccccEE
Q 024145          172 GLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNL  251 (272)
Q Consensus       172 ~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i  251 (272)
                      .|+++++.|++++||++|+|+||+++|++.....   ..   . ....+. +++.+|+|+|++++++++...   +++++
T Consensus       155 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---~~---~-~~~~~~-~~~~~p~dvA~~i~~l~~~~~---~~~~~  223 (245)
T 3e9n_A          155 GLADAFRKEEANNGIRVSTVSPGPTNTPMLQGLM---DS---Q-GTNFRP-EIYIEPKEIANAIRFVIDAGE---TTQIT  223 (245)
T ss_dssp             HHHHHHHHHHGGGTCEEEEEEECCC-----------------------CC-GGGSCHHHHHHHHHHHHTSCT---TEEEE
T ss_pred             HHHHHHHHHhhhcCeEEEEEecCCccCchhhhhh---hh---h-hccccc-ccCCCHHHHHHHHHHHHcCCC---cccee
Confidence            9999999999999999999999999999876321   11   0 011122 678899999999999997654   45555


Q ss_pred             Eec
Q 024145          252 VVD  254 (272)
Q Consensus       252 ~~d  254 (272)
                      .+|
T Consensus       224 ~i~  226 (245)
T 3e9n_A          224 NVD  226 (245)
T ss_dssp             EEE
T ss_pred             eeE
Confidence            443

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=100.00  E-value=2.7e-40  Score=278.89  Aligned_cols=220  Identities=21%  Similarity=0.299  Sum_probs=173.1

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEe
Q 024145           16 KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYN   95 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~   95 (272)
                      |++|||||++|||++++++|+++|++|++++|+++..+.         . +.+|+++.++++++++++   .+++|+|||
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~---------~-~~~Dl~~~~~v~~~~~~~---~~~id~lv~   68 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA---------D-LSTAEGRKQAIADVLAKC---SKGMDGLVL   68 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC---------C-TTSHHHHHHHHHHHHTTC---TTCCSEEEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc---------c-cccCCCCHHHHHHHHHHh---CCCCCEEEE
Confidence            689999999999999999999999999999998765321         1 678999999988877633   378999999


Q ss_pred             CCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccccc---------------------
Q 024145           96 NAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTE---------------------  154 (272)
Q Consensus        96 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~---------------------  154 (272)
                      |||.....         +.+++.+++|+.+++.++++++|+|.+++.|+||++||..+.                     
T Consensus        69 ~Ag~~~~~---------~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~  139 (257)
T 1fjh_A           69 CAGLGPQT---------KVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKA  139 (257)
T ss_dssp             CCCCCTTC---------SSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHH
T ss_pred             CCCCCCCc---------ccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchhhh
Confidence            99975421         128999999999999999999999988778999999999887                     


Q ss_pred             -------ccCCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhh-cCCCCCCCC
Q 024145          155 -------IAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQ-MGNLKGEFL  226 (272)
Q Consensus       155 -------~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  226 (272)
                             .+.++...|++||++++.+++.++.|++++||++|+|+||+++|++..... ........... ..++ +++.
T Consensus       140 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~~~~-~~~~  217 (257)
T 1fjh_A          140 RAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGL-QDPRYGESIAKFVPPM-GRRA  217 (257)
T ss_dssp             HHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC----------------------CCCST-TSCC
T ss_pred             hhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhc-cchhHHHHHHhccccc-CCCC
Confidence                   344466789999999999999999999999999999999999999976321 11111111211 2233 6889


Q ss_pred             ChHhHHHHHHHHhcCCCCCccccEEEecCceee
Q 024145          227 KTDGIANAALYLASDESSYVSGQNLVVDGGFSV  259 (272)
Q Consensus       227 ~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~  259 (272)
                      +|+|+|++++++++++..+++|++|.+|||...
T Consensus       218 ~~~dvA~~~~~l~~~~~~~~tG~~~~vdgG~~~  250 (257)
T 1fjh_A          218 EPSEMASVIAFLMSPAASYVHGAQIVIDGGIDA  250 (257)
T ss_dssp             CTHHHHHHHHHHTSGGGTTCCSCEEEESTTHHH
T ss_pred             CHHHHHHHHHHHhCchhcCCcCCEEEECCCccc
Confidence            999999999999998888999999999999765

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.3e-38  Score=271.23  Aligned_cols=219  Identities=26%  Similarity=0.388  Sum_probs=193.1

Q ss_pred             cCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHH
Q 024145            9 PFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVS   85 (272)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (272)
                      +..++++|++|||||++|||++++++|+++|++|++++|+++..+++.+++   +.++.++.+|++|.++++++++++.+
T Consensus        25 ~~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  104 (272)
T 1yb1_A           25 RRKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKA  104 (272)
T ss_dssp             CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHH
Confidence            356789999999999999999999999999999999999987776665544   56899999999999999999999999


Q ss_pred             HhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhh
Q 024145           86 KFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTI  165 (272)
Q Consensus        86 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~  165 (272)
                      +++++|+||||||....  .++.+.+.+++++.+++|+.+++.+++.+++.|.+++.++||++||..+..+.+....|++
T Consensus       105 ~~g~iD~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  182 (272)
T 1yb1_A          105 EIGDVSILVNNAGVVYT--SDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCS  182 (272)
T ss_dssp             HTCCCSEEEECCCCCCC--CCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHHH
T ss_pred             HCCCCcEEEECCCcCCC--cchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCchhHHH
Confidence            99999999999998755  6677888999999999999999999999999998878899999999998887777889999


Q ss_pred             hHHHHHHHHHHHHHHhc---CCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCC
Q 024145          166 SKYGILGLVKCLAAELG---QYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDE  242 (272)
Q Consensus       166 sK~a~~~~~~~la~e~~---~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  242 (272)
                      ||++++.++++++.|+.   ++||++++|+||+++|++...   ..       .   + .+++.+|+|+|+.+++++...
T Consensus       183 sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~---~~-------~---~-~~~~~~~~dva~~i~~~~~~~  248 (272)
T 1yb1_A          183 SKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN---PS-------T---S-LGPTLEPEEVVNRLMHGILTE  248 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC---TH-------H---H-HCCCCCHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCcccc---cc-------c---c-ccCCCCHHHHHHHHHHHHHcC
Confidence            99999999999999996   679999999999999998642   10       0   1 156789999999999998764


Q ss_pred             C
Q 024145          243 S  243 (272)
Q Consensus       243 ~  243 (272)
                      .
T Consensus       249 ~  249 (272)
T 1yb1_A          249 Q  249 (272)
T ss_dssp             C
T ss_pred             C
Confidence            3

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=100.00  E-value=1.3e-39  Score=284.40  Aligned_cols=234  Identities=18%  Similarity=0.181  Sum_probs=185.3

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHH---HHHHHh------CCceEEEEecCCCHHHHHHHHHHHH
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGE---DLADKL------GQDVCYIHCDISNEDEVINLVDTAV   84 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~---~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~   84 (272)
                      ++|++|||||++|||++++++|+++|++|++++|+....+   +..+..      +.++.++.+|++|.++++++++++.
T Consensus         1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   80 (327)
T 1jtv_A            1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT   80 (327)
T ss_dssp             CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence            4799999999999999999999999999888877654432   222222      3578999999999999999999873


Q ss_pred             HHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhh
Q 024145           85 SKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYT  164 (272)
Q Consensus        85 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~  164 (272)
                        ++++|+||||||+...  .++.+.+.++|++++++|+.+++.++++++|+|.+++.|+||++||..+..+.+....|+
T Consensus        81 --~g~iD~lVnnAG~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~~~~~~Y~  156 (327)
T 1jtv_A           81 --EGRVDVLVCNAGLGLL--GPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYC  156 (327)
T ss_dssp             --TSCCSEEEECCCCCCC--SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHH
T ss_pred             --cCCCCEEEECCCcCCC--CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCCCCChHHH
Confidence              5789999999998654  677888999999999999999999999999999877789999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChh--------HHHHHHhhc----CCCCCCC-CChHhH
Q 024145          165 ISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPA--------LIESSMSQM----GNLKGEF-LKTDGI  231 (272)
Q Consensus       165 ~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~--------~~~~~~~~~----~~~~~~~-~~~~dv  231 (272)
                      +||+++++|+++++.|++++||+|++|+||+++|++.........        ...+.+...    ..+.+++ .+|+|+
T Consensus       157 aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedv  236 (327)
T 1jtv_A          157 ASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEV  236 (327)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBCHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhhhhhcchhhhccCCHHHHHHHHHHHHHHHHhhhhcCCCHHHH
Confidence            999999999999999999999999999999999999764221110        001111000    0011333 589999


Q ss_pred             HHHHHHHhcC---CCCCccccEE
Q 024145          232 ANAALYLASD---ESSYVSGQNL  251 (272)
Q Consensus       232 a~~~~~l~s~---~~~~~~G~~i  251 (272)
                      |+.++++++.   ...+++|+.+
T Consensus       237 A~~i~~l~~~~~~~~~~~tg~~~  259 (327)
T 1jtv_A          237 AEVFLTALRAPKPTLRYFTTERF  259 (327)
T ss_dssp             HHHHHHHHHCSSCCSEEESCSTT
T ss_pred             HHHHHHHHcCCCCCeEEEeCchH
Confidence            9999999864   3456777654

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=100.00  E-value=1.2e-38  Score=284.35  Aligned_cols=242  Identities=14%  Similarity=0.051  Sum_probs=198.9

Q ss_pred             CCCcEEEEeCCCChHHHH--HHHHHHHcCCeEEEeecCcch---------------HHHHHHHhCCceEEEEecCCCHHH
Q 024145           13 LEGKVAIITGGASGIGAM--AVELFHENGAKVVIADVQDKL---------------GEDLADKLGQDVCYIHCDISNEDE   75 (272)
Q Consensus        13 l~~k~vlItGas~giG~a--ia~~la~~G~~V~~~~r~~~~---------------~~~~~~~~~~~~~~~~~D~~~~~~   75 (272)
                      ..||++|||||++|||++  ++++|+++|++|++++|+...               .++..++.+.++.++.+|+++.++
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~  137 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNET  137 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHH
Confidence            578999999999999999  999999999999999986543               222334456789999999999999


Q ss_pred             HHHHHHHHHHHhCCccEEEeCCCCCCC-----------CCCCC---------------------CCCCHHHHHHHHHHHh
Q 024145           76 VINLVDTAVSKFGKLDIMYNNAGILDR-----------SFGSI---------------------LDTPKSDLERLINVNT  123 (272)
Q Consensus        76 ~~~~~~~~~~~~g~id~lv~~ag~~~~-----------~~~~~---------------------~~~~~~~~~~~~~~n~  123 (272)
                      ++++++++.+++|++|+||||||...+           ...++                     .+.+.++|++.+++|.
T Consensus       138 v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn~  217 (418)
T 4eue_A          138 KDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVMG  217 (418)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhh
Confidence            999999999999999999999997410           11223                     4578999999999999


Q ss_pred             HHHH-HHHHHHHHhhcCCCCceEEEEecccccccCCCC--chhhhhHHHHHHHHHHHHHHhcC-CCcEEEEEeCCcccCC
Q 024145          124 IGGF-LGAKHAARVMVPQQKGCILFTASACTEIAGLGS--PAYTISKYGILGLVKCLAAELGQ-YGIRVNCVSPYGLATG  199 (272)
Q Consensus       124 ~~~~-~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~--~~Y~~sK~a~~~~~~~la~e~~~-~gi~v~~i~Pg~v~t~  199 (272)
                      .+.+ .+++++.+.+..++.|+||++||..+..+.+.+  ..|++||+|+++|+++++.|+++ +||+||+|+||++.|+
T Consensus       218 ~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V~PG~v~T~  297 (418)
T 4eue_A          218 GEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRTYKIYREGTIGIAKKDLEDKAKLINEKLNRVIGGRAFVSVNKALVTK  297 (418)
T ss_dssp             SHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEEECCCCCCH
T ss_pred             HHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEECCcCcCh
Confidence            9988 788888776554567999999999999998888  99999999999999999999999 9999999999999999


Q ss_pred             cccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccccEEEecCceeec
Q 024145          200 MSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~  260 (272)
                      +.......+.. ...+..  + .++..+||++++.+.+|+++  .+.+|+.+.+|||..+.
T Consensus       298 ~s~~ip~~p~y-~~~~~~--~-mk~~G~~E~v~e~~~~L~sd--~~~~g~~~~~D~~~~~r  352 (418)
T 4eue_A          298 ASAYIPTFPLY-AAILYK--V-MKEKNIHENCIMQIERMFSE--KIYSNEKIQFDDKGRLR  352 (418)
T ss_dssp             HHHTSTTHHHH-HHHHHH--H-HHHTTCCCCHHHHHHHHHHH--TTSSSSCCCCCTTSCEE
T ss_pred             hhhcCCCCcHH-HHHHHH--H-HhhcCChHHHHHHHHHHhhc--cccCCCccccCCCceee
Confidence            98753222211 121211  1 25668999999999999987  56789999999866553

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=100.00  E-value=1.2e-37  Score=264.50  Aligned_cols=219  Identities=25%  Similarity=0.274  Sum_probs=187.7

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHH-cCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHE-NGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~-~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      .++|++|||||++|||++++++|++ +|++|++++|+.+..++..+++   +.++.++.+|++|.++++++++++.++++
T Consensus         2 ~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   81 (276)
T 1wma_A            2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYG   81 (276)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            3689999999999999999999999 9999999999987776665554   56789999999999999999999999999


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCC-HHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccccccc--C--------
Q 024145           89 KLDIMYNNAGILDRSFGSILDTP-KSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIA--G--------  157 (272)
Q Consensus        89 ~id~lv~~ag~~~~~~~~~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~--~--------  157 (272)
                      ++|+||||||....  . ....+ .+++++.+++|+.+++.+++.++++|.+  .|+||++||..+..+  .        
T Consensus        82 ~id~li~~Ag~~~~--~-~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~~sS~~~~~~~~~~~~~~~~~  156 (276)
T 1wma_A           82 GLDVLVNNAGIAFK--V-ADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP--QGRVVNVSSIMSVRALKSCSPELQQK  156 (276)
T ss_dssp             SEEEEEECCCCCCC--T-TCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHHHHHHTSCHHHHHH
T ss_pred             CCCEEEECCccccc--C-CCccccHHHHHhhhheeeeeHHHHHHHHHHhhCC--CCEEEEECChhhhcccccCChhHHhh
Confidence            99999999998654  2 23334 5899999999999999999999999865  489999999876532  0        


Q ss_pred             -------------------------------CCCchhhhhHHHHHHHHHHHHHHhcC----CCcEEEEEeCCcccCCccc
Q 024145          158 -------------------------------LGSPAYTISKYGILGLVKCLAAELGQ----YGIRVNCVSPYGLATGMSM  202 (272)
Q Consensus       158 -------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~----~gi~v~~i~Pg~v~t~~~~  202 (272)
                                                     .....|++||++++.|++.++.++.+    +||++++|+||+++|++..
T Consensus       157 ~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~  236 (276)
T 1wma_A          157 FRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAG  236 (276)
T ss_dssp             HHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTC
T ss_pred             ccccccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCC
Confidence                                           12378999999999999999999987    7999999999999999865


Q ss_pred             CCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCC--CCCccccEEEecCc
Q 024145          203 KGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDE--SSYVSGQNLVVDGG  256 (272)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~--~~~~~G~~i~~dgG  256 (272)
                      .                   .++.+|+|+|+.+++|++.+  ..+++|++|. +++
T Consensus       237 ~-------------------~~~~~~~~~a~~~~~l~~~~~~~~~~~G~~~~-~~~  272 (276)
T 1wma_A          237 P-------------------KATKSPEEGAETPVYLALLPPDAEGPHGQFVS-EKR  272 (276)
T ss_dssp             T-------------------TCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE-TTE
T ss_pred             c-------------------cccCChhHhhhhHhhhhcCcccccccCceEec-cCc
Confidence            2                   24679999999999999854  4689999987 554

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=100.00  E-value=8.2e-36  Score=255.61  Aligned_cols=216  Identities=18%  Similarity=0.214  Sum_probs=185.2

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---C-CceEEEEecCCCHHHHHHHHHHHHHH
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---G-QDVCYIHCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (272)
                      .+++||++|||||++|||++++++|+++|++|++++|+++..+++.+++   + .++.++.+|++|.++++++++++.++
T Consensus        24 ~~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~  103 (286)
T 1xu9_A           24 EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKL  103 (286)
T ss_dssp             GGGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             hhcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHH
Confidence            3478999999999999999999999999999999999988777665543   3 37899999999999999999999999


Q ss_pred             hCCccEEEeC-CCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhh
Q 024145           87 FGKLDIMYNN-AGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTI  165 (272)
Q Consensus        87 ~g~id~lv~~-ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~  165 (272)
                      ++++|+|||| +|...   ..+.+.+.+++++.+++|+.+++.++++++|.|.+ +.|+||++||..+..+.++...|++
T Consensus       104 ~g~iD~li~naag~~~---~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~-~~g~iv~isS~~~~~~~~~~~~Y~a  179 (286)
T 1xu9_A          104 MGGLDMLILNHITNTS---LNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQ-SNGSIVVVSSLAGKVAYPMVAAYSA  179 (286)
T ss_dssp             HTSCSEEEECCCCCCC---CCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HTCEEEEEEEGGGTSCCTTCHHHHH
T ss_pred             cCCCCEEEECCccCCC---CccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHH-CCCEEEEECCcccccCCCCccHHHH
Confidence            9999999999 56543   34556789999999999999999999999999865 3589999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHh--cCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCC
Q 024145          166 SKYGILGLVKCLAAEL--GQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDE  242 (272)
Q Consensus       166 sK~a~~~~~~~la~e~--~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  242 (272)
                      ||++++.++++++.|+  ...||++++++||+++|++......          ..  ......+|||+|+.++..+...
T Consensus       180 sK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~----------~~--~~~~~~~~~~vA~~i~~~~~~~  246 (286)
T 1xu9_A          180 SKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVS----------GI--VHMQAAPKEECALEIIKGGALR  246 (286)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSC----------GG--GGGGCBCHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhHHHhcc----------cc--ccCCCCCHHHHHHHHHHHHhcC
Confidence            9999999999999999  6789999999999999998642100          00  0124578999999999887653

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=100.00  E-value=1.5e-36  Score=305.25  Aligned_cols=239  Identities=20%  Similarity=0.240  Sum_probs=197.8

Q ss_pred             CCCCCCcEEEEeCCCCh-HHHHHHHHHHHcCCeEEEe-ecCcchHHHHHHHh-------CCceEEEEecCCCHHHHHHHH
Q 024145           10 FKRLEGKVAIITGGASG-IGAMAVELFHENGAKVVIA-DVQDKLGEDLADKL-------GQDVCYIHCDISNEDEVINLV   80 (272)
Q Consensus        10 ~~~l~~k~vlItGas~g-iG~aia~~la~~G~~V~~~-~r~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~   80 (272)
                      .++++||++|||||++| ||++++++|+++|++|+++ +|+.+..++..+++       +.++.++.+|++|.+++++++
T Consensus       670 ~m~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv  749 (1887)
T 2uv8_A          670 GVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALI  749 (1887)
T ss_dssp             CBCCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHH
T ss_pred             cCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHH
Confidence            34689999999999998 9999999999999999998 56666655444333       557899999999999999999


Q ss_pred             HHHHHH-----hC-CccEEEeCCCCCCCCCC-CCCCCC--HHHHHHHHHHHhHHHHHHHHHH--HHhhcCCCCceEEEEe
Q 024145           81 DTAVSK-----FG-KLDIMYNNAGILDRSFG-SILDTP--KSDLERLINVNTIGGFLGAKHA--ARVMVPQQKGCILFTA  149 (272)
Q Consensus        81 ~~~~~~-----~g-~id~lv~~ag~~~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~l~~~~--~~~~~~~~~g~iv~is  149 (272)
                      +++.++     +| ++|+||||||+...  + ++.+.+  .++|+++|++|+.+++.+++.+  ++.|.+++.|+||++|
T Consensus       750 ~~i~~~~~~~G~G~~LDiLVNNAGi~~~--~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnIS  827 (1887)
T 2uv8_A          750 EFIYDTEKNGGLGWDLDAIIPFAAIPEQ--GIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMS  827 (1887)
T ss_dssp             HHHHSCTTTTSCCCCCSEEEECCCCCCC--SBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEEC
T ss_pred             HHHHHhccccccCCCCeEEEECCCcCCC--CCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEc
Confidence            999988     66 89999999998754  5 678888  8999999999999999999988  7888877779999999


Q ss_pred             cccccccCCCCchhhhhHHHHHHH-HHHHHHHhcCCCcEEEEEeCCccc-CCcccCCCCChhHHHHHHhhcCCCCCCCCC
Q 024145          150 SACTEIAGLGSPAYTISKYGILGL-VKCLAAELGQYGIRVNCVSPYGLA-TGMSMKGGVDPALIESSMSQMGNLKGEFLK  227 (272)
Q Consensus       150 s~~~~~~~~~~~~Y~~sK~a~~~~-~~~la~e~~~~gi~v~~i~Pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (272)
                      |..+..+  +...|++||+|+++| .+.++.+++++ |+||+|+||+++ |+|....    +........ .+  .++.+
T Consensus       828 S~ag~~g--g~~aYaASKAAL~~Lttr~lA~ela~~-IrVNaV~PG~V~tT~m~~~~----~~~~~~~~~-~p--lr~~s  897 (1887)
T 2uv8_A          828 PNHGTFG--GDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMSAN----NIIAEGIEK-MG--VRTFS  897 (1887)
T ss_dssp             SCTTCSS--CBTTHHHHHHHGGGHHHHHHHSSCTTT-EEEEEEEECCEECC-----C----CTTHHHHHT-TS--CCCEE
T ss_pred             ChHhccC--CCchHHHHHHHHHHHHHHHHHHHhCCC-eEEEEEEecccccccccccc----hhHHHHHHh-cC--CCCCC
Confidence            9988776  677999999999999 99999999887 999999999999 7886531    111222222 22  25679


Q ss_pred             hHhHHHHHHHHhcCC-CCCccccEEEec--Cceeec
Q 024145          228 TDGIANAALYLASDE-SSYVSGQNLVVD--GGFSVV  260 (272)
Q Consensus       228 ~~dva~~~~~l~s~~-~~~~~G~~i~~d--gG~~~~  260 (272)
                      |+|+|..++||+++. ..+++|+.|.+|  ||+...
T Consensus       898 PEEVA~avlfLaSd~~as~iTGq~I~VDVDGG~~~~  933 (1887)
T 2uv8_A          898 QKEMAFNLLGLLTPEVVELCQKSPVMADLNGGLQFV  933 (1887)
T ss_dssp             HHHHHHHHHGGGSHHHHHHHHHSCEEEEESCSTTTS
T ss_pred             HHHHHHHHHHHhCCCccccccCcEEEEECCCCeecc
Confidence            999999999999987 789999999875  997654

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=4.5e-37  Score=300.56  Aligned_cols=239  Identities=20%  Similarity=0.248  Sum_probs=199.9

Q ss_pred             CCCCCCcEEEEeCCCCh-HHHHHHHHHHHcCCeEEEe-ecCcchHHHHHHHh-------CCceEEEEecCCCHHHHHHHH
Q 024145           10 FKRLEGKVAIITGGASG-IGAMAVELFHENGAKVVIA-DVQDKLGEDLADKL-------GQDVCYIHCDISNEDEVINLV   80 (272)
Q Consensus        10 ~~~l~~k~vlItGas~g-iG~aia~~la~~G~~V~~~-~r~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~   80 (272)
                      .++++||++|||||++| ||++++++|+++|++|+++ +|+.+..++..+++       +.++.++.+|++|.+++++++
T Consensus       471 ~msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLV  550 (1688)
T 2pff_A          471 XVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALI  550 (1688)
T ss_dssp             CCCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHH
T ss_pred             ccccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHH
Confidence            35689999999999998 9999999999999999998 57666555555544       457899999999999999999


Q ss_pred             HHHHHH-----hC-CccEEEeCCCCCCCCCC-CCCCCC--HHHHHHHHHHHhHHHHHHHHHH--HHhhcCCCCceEEEEe
Q 024145           81 DTAVSK-----FG-KLDIMYNNAGILDRSFG-SILDTP--KSDLERLINVNTIGGFLGAKHA--ARVMVPQQKGCILFTA  149 (272)
Q Consensus        81 ~~~~~~-----~g-~id~lv~~ag~~~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~l~~~~--~~~~~~~~~g~iv~is  149 (272)
                      +++.++     +| ++|+||||||+...  . ++.+.+  .++|++++++|+.+++.+++.+  .+.|.+++.|+||++|
T Consensus       551 e~I~e~~~~~GfG~~IDILVNNAGI~~~--g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnIS  628 (1688)
T 2pff_A          551 EFIYDTEKNGGLGWDLDAIIPFAAIPEQ--GIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMS  628 (1688)
T ss_dssp             HHHHSCTTSSSCCCCCCEEECCCCCCCC--SBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCC
T ss_pred             HHHHHhccccccCCCCeEEEECCCcCCC--CCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEE
Confidence            999988     77 89999999998654  5 678888  8999999999999999999998  8888877779999999


Q ss_pred             cccccccCCCCchhhhhHHHHHHH-HHHHHHHhcCCCcEEEEEeCCccc-CCcccCCCCChhHHHHHHhhcCCCCCCCCC
Q 024145          150 SACTEIAGLGSPAYTISKYGILGL-VKCLAAELGQYGIRVNCVSPYGLA-TGMSMKGGVDPALIESSMSQMGNLKGEFLK  227 (272)
Q Consensus       150 s~~~~~~~~~~~~Y~~sK~a~~~~-~~~la~e~~~~gi~v~~i~Pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (272)
                      |..+..+  +...|++||+|+++| .+.++.++++. |+||+|+||+++ |++....    +........ .+  .+..+
T Consensus       629 SiAG~~G--g~saYaASKAAL~aLttrsLAeEla~~-IRVNaVaPG~V~TT~M~~~~----e~~~~~l~~-ip--lR~~s  698 (1688)
T 2pff_A          629 PNHGTFG--GDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMSAN----NIIAEGIEK-MG--VRTFS  698 (1688)
T ss_dssp             SCTTTSS--CBTTHHHHHHHHTHHHHHTTTSSCTTT-EECCCCCCCCCCCCSSSCTT----TTCSTTTSS-SS--CCCCC
T ss_pred             ChHhccC--CchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEECcCcCCcccCCc----hHHHHHHHh-CC--CCCCC
Confidence            9988776  667999999999999 88889998887 999999999999 7876521    111111111 11  25669


Q ss_pred             hHhHHHHHHHHhcCC-CCCccccEEEec--Cceeec
Q 024145          228 TDGIANAALYLASDE-SSYVSGQNLVVD--GGFSVV  260 (272)
Q Consensus       228 ~~dva~~~~~l~s~~-~~~~~G~~i~~d--gG~~~~  260 (272)
                      |+|+|++++||++++ ..+++|+.+.+|  ||....
T Consensus       699 PEEVA~aIlFLaSd~sAs~ITGq~I~VDVDGG~~~~  734 (1688)
T 2pff_A          699 QKEMAFNLLGLLTPEVVELCQKSPVMADLNGGLQFV  734 (1688)
T ss_dssp             CCTTHHHHHHHTSTTHHHHHTTSCCCCCCSCSGGGS
T ss_pred             HHHHHHHHHHHhCCCccccccCcEEEEEcCCCeeec
Confidence            999999999999988 689999999876  997654

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=100.00  E-value=2.1e-35  Score=240.28  Aligned_cols=200  Identities=18%  Similarity=0.176  Sum_probs=174.7

Q ss_pred             Cc-EEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           15 GK-VAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        15 ~k-~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      +| ++|||||+||||++++++|+ +|++|++++|+++              .+.+|++++++++++++++    +++|+|
T Consensus         2 ~kM~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~--------------~~~~D~~~~~~~~~~~~~~----~~~d~v   62 (202)
T 3d7l_A            2 NAMKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG--------------DVTVDITNIDSIKKMYEQV----GKVDAI   62 (202)
T ss_dssp             CSCEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS--------------SEECCTTCHHHHHHHHHHH----CCEEEE
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc--------------ceeeecCCHHHHHHHHHHh----CCCCEE
Confidence            45 79999999999999999999 9999999999764              4789999999999888764    789999


Q ss_pred             EeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHHHHH
Q 024145           94 YNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGL  173 (272)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~  173 (272)
                      |||||....  .++.+.+.+++++.+++|+.+++.+++++.+.|.+  .++||++||..+..+.+....|+.||++++.+
T Consensus        63 i~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~~  138 (202)
T 3d7l_A           63 VSATGSATF--SPLTELTPEKNAVTISSKLGGQINLVLLGIDSLND--KGSFTLTTGIMMEDPIVQGASAAMANGAVTAF  138 (202)
T ss_dssp             EECCCCCCC--CCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEE--EEEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred             EECCCCCCC--CChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhcc--CCEEEEEcchhhcCCCCccHHHHHHHHHHHHH
Confidence            999997654  66788899999999999999999999999999864  38999999999988889999999999999999


Q ss_pred             HHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccccEEEe
Q 024145          174 VKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVV  253 (272)
Q Consensus       174 ~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~  253 (272)
                      ++.++.|+ ++||++++++||+++|++...            ....+ ..++.+|+|+|++++++++   .+++|+.|++
T Consensus       139 ~~~~~~e~-~~gi~v~~v~pg~v~~~~~~~------------~~~~~-~~~~~~~~dva~~~~~~~~---~~~~G~~~~v  201 (202)
T 3d7l_A          139 AKSAAIEM-PRGIRINTVSPNVLEESWDKL------------EPFFE-GFLPVPAAKVARAFEKSVF---GAQTGESYQV  201 (202)
T ss_dssp             HHHHTTSC-STTCEEEEEEECCBGGGHHHH------------GGGST-TCCCBCHHHHHHHHHHHHH---SCCCSCEEEE
T ss_pred             HHHHHHHc-cCCeEEEEEecCccCCchhhh------------hhhcc-ccCCCCHHHHHHHHHHhhh---ccccCceEec
Confidence            99999999 789999999999999987431            01112 2678899999999998873   4679999998


Q ss_pred             c
Q 024145          254 D  254 (272)
Q Consensus       254 d  254 (272)
                      |
T Consensus       202 d  202 (202)
T 3d7l_A          202 Y  202 (202)
T ss_dssp             C
T ss_pred             C
Confidence            7

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=100.00  E-value=2.6e-35  Score=295.80  Aligned_cols=238  Identities=18%  Similarity=0.239  Sum_probs=197.2

Q ss_pred             CCCCCcEEEEeCCCCh-HHHHHHHHHHHcCCeEEEee-cCcchHHHHH----HHh---CCceEEEEecCCCHHHHHHHHH
Q 024145           11 KRLEGKVAIITGGASG-IGAMAVELFHENGAKVVIAD-VQDKLGEDLA----DKL---GQDVCYIHCDISNEDEVINLVD   81 (272)
Q Consensus        11 ~~l~~k~vlItGas~g-iG~aia~~la~~G~~V~~~~-r~~~~~~~~~----~~~---~~~~~~~~~D~~~~~~~~~~~~   81 (272)
                      ++++||++|||||++| ||++++++|+++|++|++++ |+.+..++..    +++   +.++.++.||++|.++++++++
T Consensus       648 m~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~  727 (1878)
T 2uv9_A          648 LTFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVN  727 (1878)
T ss_dssp             BCCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHH
Confidence            4689999999999999 99999999999999999985 5555444333    333   4578999999999999999999


Q ss_pred             HHHHH---hC-CccEEEeCCCCCCCCCC-CCCCCC--HHHHHHHHHHHhHHHHHHHHH--HHHhhcCCCCceEEEEeccc
Q 024145           82 TAVSK---FG-KLDIMYNNAGILDRSFG-SILDTP--KSDLERLINVNTIGGFLGAKH--AARVMVPQQKGCILFTASAC  152 (272)
Q Consensus        82 ~~~~~---~g-~id~lv~~ag~~~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~l~~~--~~~~~~~~~~g~iv~iss~~  152 (272)
                      ++.++   +| ++|+||||||+...  + ++.+.+  .++|++++++|+.+++.+++.  +++.|.+++.|+||++||..
T Consensus       728 ~i~~~~~~~G~~IDiLVnNAGi~~~--~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~a  805 (1878)
T 2uv9_A          728 YIYDTKNGLGWDLDYVVPFAAIPEN--GREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNH  805 (1878)
T ss_dssp             HHHCSSSSCCCCCSEEEECCCCCCT--TCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCS
T ss_pred             HHHHhhcccCCCCcEEEeCcccccC--CCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchh
Confidence            99988   88 99999999998654  5 788888  899999999999999999987  77888877779999999998


Q ss_pred             ccccCCCCchhhhhHHHHHHHHHHHHH-HhcCCCcEEEEEeCCccc-CCcccCCCCChhHHHHHHhhcCCCCCCCCChHh
Q 024145          153 TEIAGLGSPAYTISKYGILGLVKCLAA-ELGQYGIRVNCVSPYGLA-TGMSMKGGVDPALIESSMSQMGNLKGEFLKTDG  230 (272)
Q Consensus       153 ~~~~~~~~~~Y~~sK~a~~~~~~~la~-e~~~~gi~v~~i~Pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  230 (272)
                      +..+  +...|++||+|+++|++.++. +++++ |+||+|+||+++ |+|...    .+........ .+  -+..+|+|
T Consensus       806 g~~g--g~~aYaASKAAL~aLt~~laAeEla~~-IrVNaVaPG~V~gT~m~~~----~~~~~~~~~~-~p--lr~~sPeE  875 (1878)
T 2uv9_A          806 GTFG--NDGLYSESKLALETLFNRWYSESWGNY-LTICGAVIGWTRGTGLMSA----NNLVAEGVEK-LG--VRTFSQQE  875 (1878)
T ss_dssp             SSSS--CCSSHHHHHHHHTTHHHHHHHSTTTTT-EEEEEEEECCBCCTTSCSH----HHHTHHHHHT-TT--CCCBCHHH
T ss_pred             hccC--CchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEecceecCccccc----chhhHHHHHh-cC--CCCCCHHH
Confidence            8876  467999999999999887665 47776 999999999999 998652    1111222222 22  25569999


Q ss_pred             HHHHHHHHhcCCC-CCccccEEEe--cCceeec
Q 024145          231 IANAALYLASDES-SYVSGQNLVV--DGGFSVV  260 (272)
Q Consensus       231 va~~~~~l~s~~~-~~~~G~~i~~--dgG~~~~  260 (272)
                      +|.+++||+++.. .+++|+.+.+  |||....
T Consensus       876 VA~avlfLaSd~a~s~iTGq~I~VDVDGG~~~~  908 (1878)
T 2uv9_A          876 MAFNLLGLMAPAIVNLCQSDPVFADLNGGLQFI  908 (1878)
T ss_dssp             HHHHHHHHHSHHHHHHHTTSCEEEEESCSGGGC
T ss_pred             HHHHHHHHhCCcccccccCcEEEEEcCCCcccc
Confidence            9999999999886 8999999987  4997654

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=100.00  E-value=9.5e-36  Score=250.18  Aligned_cols=222  Identities=25%  Similarity=0.281  Sum_probs=180.0

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEe
Q 024145           16 KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYN   95 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~   95 (272)
                      |++|||||+||||++++++|+++|++|++++|+++..+.          .+.+|+++.++++++++++   .+++|+|||
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----------~~~~D~~~~~~~~~~~~~~---~~~~d~vi~   68 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA----------DLSTPGGRETAVAAVLDRC---GGVLDGLVC   68 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC----------CTTSHHHHHHHHHHHHHHH---TTCCSEEEE
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc----------cccCCcccHHHHHHHHHHc---CCCccEEEE
Confidence            589999999999999999999999999999998764321          1678999999988887754   368999999


Q ss_pred             CCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccC------------------
Q 024145           96 NAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAG------------------  157 (272)
Q Consensus        96 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~------------------  157 (272)
                      |||....         .+.+++.+++|+.+++.+++++.+.|.+.+.++||++||..+..+.                  
T Consensus        69 ~Ag~~~~---------~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  139 (255)
T 2dkn_A           69 CAGVGVT---------AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEARA  139 (255)
T ss_dssp             CCCCCTT---------SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHH
T ss_pred             CCCCCCc---------chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchhhh
Confidence            9997542         1237889999999999999999999987777999999999877654                  


Q ss_pred             --------CCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChH
Q 024145          158 --------LGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTD  229 (272)
Q Consensus       158 --------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (272)
                              +....|+.||++++.+++.++.++.++||++++++||++.|++....... ...........+..+++.+++
T Consensus       140 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  218 (255)
T 2dkn_A          140 IELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKAD-PRYGESTRRFVAPLGRGSEPR  218 (255)
T ss_dssp             HHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHHHHC-TTTHHHHHSCCCTTSSCBCHH
T ss_pred             hhhccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhcccc-hhhHHHHHHHHHHhcCCCCHH
Confidence                    45668999999999999999999988899999999999999976421000 001111111110236889999


Q ss_pred             hHHHHHHHHhcCCCCCccccEEEecCceeec
Q 024145          230 GIANAALYLASDESSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       230 dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~  260 (272)
                      |+|++++++++++..+++|+.|.+|||..+.
T Consensus       219 dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~  249 (255)
T 2dkn_A          219 EVAEAIAFLLGPQASFIHGSVLFVDGGMDAL  249 (255)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTHHHH
T ss_pred             HHHHHHHHHhCCCcccceeeEEEecCCeEee
Confidence            9999999999887778999999999997654

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=100.00  E-value=1.8e-34  Score=235.37  Aligned_cols=200  Identities=20%  Similarity=0.257  Sum_probs=171.4

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEe
Q 024145           16 KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYN   95 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~   95 (272)
                      |++|||||+||||++++++|+++  +|++++|+++..+++.++++.  .++.+|++|++++++++++    ++++|+|||
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~--~~~~~D~~~~~~~~~~~~~----~~~id~vi~   72 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGA--RALPADLADELEAKALLEE----AGPLDLLVH   72 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTC--EECCCCTTSHHHHHHHHHH----HCSEEEEEE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccC--cEEEeeCCCHHHHHHHHHh----cCCCCEEEE
Confidence            68999999999999999999999  999999998877777776654  8889999999999988876    689999999


Q ss_pred             CCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHHHHHHH
Q 024145           96 NAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVK  175 (272)
Q Consensus        96 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~~~  175 (272)
                      |||....  .++.+.+.+++++.+++|+.+++.+++++    .+++.++||++||..+..+.++...|++||++++.+++
T Consensus        73 ~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~  146 (207)
T 2yut_A           73 AVGKAGR--ASVREAGRDLVEEMLAAHLLTAAFVLKHA----RFQKGARAVFFGAYPRYVQVPGFAAYAAAKGALEAYLE  146 (207)
T ss_dssp             CCCCCCC--BCSCC---CHHHHHHHHHHHHHHHHHHHC----CEEEEEEEEEECCCHHHHSSTTBHHHHHHHHHHHHHHH
T ss_pred             CCCcCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHH----HhcCCcEEEEEcChhhccCCCCcchHHHHHHHHHHHHH
Confidence            9998654  66778889999999999999999999987    33456899999999998888899999999999999999


Q ss_pred             HHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCC
Q 024145          176 CLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDES  243 (272)
Q Consensus       176 ~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  243 (272)
                      .++.|++++||++++++||++.|++...              .....+++.+|+|+|++++++++++.
T Consensus       147 ~~~~~~~~~gi~v~~v~pg~v~t~~~~~--------------~~~~~~~~~~~~dva~~~~~~~~~~~  200 (207)
T 2yut_A          147 AARKELLREGVHLVLVRLPAVATGLWAP--------------LGGPPKGALSPEEAARKVLEGLFREP  200 (207)
T ss_dssp             HHHHHHHTTTCEEEEECCCCBCSGGGGG--------------GTSCCTTCBCHHHHHHHHHHHHC--C
T ss_pred             HHHHHHhhhCCEEEEEecCcccCCCccc--------------cCCCCCCCCCHHHHHHHHHHHHhCCC
Confidence            9999999999999999999999998431              01122688999999999999997654

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=100.00  E-value=2.9e-32  Score=251.19  Aligned_cols=215  Identities=14%  Similarity=0.154  Sum_probs=179.4

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCe-EEEe-ecCc-------------chHHHHHHH---hCCceEEEEecCCCHHH
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAK-VVIA-DVQD-------------KLGEDLADK---LGQDVCYIHCDISNEDE   75 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~-V~~~-~r~~-------------~~~~~~~~~---~~~~~~~~~~D~~~~~~   75 (272)
                      .+|++|||||++|||++++++|+++|++ |+++ +|+.             +..+++.++   .+.++.++.||++|.++
T Consensus       250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~  329 (525)
T 3qp9_A          250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAEA  329 (525)
T ss_dssp             TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHHH
Confidence            6899999999999999999999999997 7777 8874             333444443   36789999999999999


Q ss_pred             HHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCC-CceEEEEeccccc
Q 024145           76 VINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ-KGCILFTASACTE  154 (272)
Q Consensus        76 ~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~  154 (272)
                      ++++++++. +++++|+||||||+...  +.+.+.+.+++++++++|+.+++++.+.+.+.+.+++ .++||++||..+.
T Consensus       330 v~~~~~~i~-~~g~id~vVh~AGv~~~--~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~  406 (525)
T 3qp9_A          330 AARLLAGVS-DAHPLSAVLHLPPTVDS--EPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAI  406 (525)
T ss_dssp             HHHHHHTSC-TTSCEEEEEECCCCCCC--CCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGT
T ss_pred             HHHHHHHHH-hcCCCcEEEECCcCCCC--CchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHc
Confidence            999999988 78999999999998776  7889999999999999999999999999999997765 7899999999999


Q ss_pred             ccCCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHH
Q 024145          155 IAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANA  234 (272)
Q Consensus       155 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  234 (272)
                      .+.+++..|++||+++++|    +.++.++||++++|+||+++|+|...     ......+....   -..++|++++++
T Consensus       407 ~g~~g~~~YaaaKa~l~~l----A~~~~~~gi~v~sI~pG~~~tgm~~~-----~~~~~~~~~~g---~~~l~pee~a~~  474 (525)
T 3qp9_A          407 WGGAGQGAYAAGTAFLDAL----AGQHRADGPTVTSVAWSPWEGSRVTE-----GATGERLRRLG---LRPLAPATALTA  474 (525)
T ss_dssp             TCCTTCHHHHHHHHHHHHH----HTSCCSSCCEEEEEEECCBTTSGGGS-----SHHHHHHHHTT---BCCBCHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHH----HHHHHhCCCCEEEEECCccccccccc-----hhhHHHHHhcC---CCCCCHHHHHHH
Confidence            9999999999999999887    45677889999999999999999752     11122222221   245799999999


Q ss_pred             HHHHhcCCC
Q 024145          235 ALYLASDES  243 (272)
Q Consensus       235 ~~~l~s~~~  243 (272)
                      +.++++...
T Consensus       475 l~~~l~~~~  483 (525)
T 3qp9_A          475 LDTALGHGD  483 (525)
T ss_dssp             HHHHHHHTC
T ss_pred             HHHHHhCCC
Confidence            999987653

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.97  E-value=6.9e-31  Score=275.33  Aligned_cols=244  Identities=18%  Similarity=0.160  Sum_probs=182.7

Q ss_pred             CCCCCcEEEEeCCCCh-HHHHHHHHHHHcCCeEEEeecCcch-----HHHHHHHh---CCceEEEEecCCCHHHHHHHHH
Q 024145           11 KRLEGKVAIITGGASG-IGAMAVELFHENGAKVVIADVQDKL-----GEDLADKL---GQDVCYIHCDISNEDEVINLVD   81 (272)
Q Consensus        11 ~~l~~k~vlItGas~g-iG~aia~~la~~G~~V~~~~r~~~~-----~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~   81 (272)
                      ..++||++|||||++| ||+++++.|+++|++|++++|+.+.     .+++.+++   +.++..+.+|+++.++++++++
T Consensus      2132 ~~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~ 2211 (3089)
T 3zen_D         2132 XXXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVE 2211 (3089)
T ss_dssp             CCCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             ccCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHH
Confidence            3489999999999999 9999999999999999999998776     55666665   3468899999999999999999


Q ss_pred             HHHH----HhCCccEEEeCCCCCC---CCCCCCCCCCHHH----HHHHHHHHhHHHHHHHHHHHHhhcCCCCc---eEE-
Q 024145           82 TAVS----KFGKLDIMYNNAGILD---RSFGSILDTPKSD----LERLINVNTIGGFLGAKHAARVMVPQQKG---CIL-  146 (272)
Q Consensus        82 ~~~~----~~g~id~lv~~ag~~~---~~~~~~~~~~~~~----~~~~~~~n~~~~~~l~~~~~~~~~~~~~g---~iv-  146 (272)
                      ++.+    ++|++|+||||||+..   +......+.+.++    ++..+++|+.+++.+++.+.+.|.+++.+   .+| 
T Consensus      2212 ~i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~ 2291 (3089)
T 3zen_D         2212 WVGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVL 2291 (3089)
T ss_dssp             HHTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEE
T ss_pred             HHHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEE
Confidence            9998    8899999999999721   1001222333333    44559999999999999999999765432   222 


Q ss_pred             EEecccccccCCCCchhhhhHHHHHHHHHHHHHH--hcCCCcEEEEEeCCccc-CCcccCCCCChhHHHHHHhhcCCCCC
Q 024145          147 FTASACTEIAGLGSPAYTISKYGILGLVKCLAAE--LGQYGIRVNCVSPYGLA-TGMSMKGGVDPALIESSMSQMGNLKG  223 (272)
Q Consensus       147 ~iss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e--~~~~gi~v~~i~Pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~  223 (272)
                      ..|+..+  ..++...|++||+|+++|+++++.|  +++ +|+||+++||+++ |++....    +..........   .
T Consensus      2292 ~~ss~~g--~~g~~~aYsASKaAl~~LtrslA~E~~~a~-~IrVn~v~PG~v~tT~l~~~~----~~~~~~~~~~~---~ 2361 (3089)
T 3zen_D         2292 PGSPNRG--MFGGDGAYGEAKSALDALENRWSAEKSWAE-RVSLAHALIGWTKGTGLMGQN----DAIVSAVEEAG---V 2361 (3089)
T ss_dssp             EECSSTT--SCSSCSSHHHHGGGHHHHHHHHHHCSTTTT-TEEEEEEECCCEECSTTTTTT----TTTHHHHGGGS---C
T ss_pred             ECCcccc--cCCCchHHHHHHHHHHHHHHHHHhccccCC-CeEEEEEeecccCCCcccccc----hhHHHHHHhcC---C
Confidence            2333222  2335568999999999999999999  665 6999999999999 6665421    11122222221   2


Q ss_pred             CCCChHhHHHHHHHHhcCCCCC-ccccEEEec--CceeeccCcc
Q 024145          224 EFLKTDGIANAALYLASDESSY-VSGQNLVVD--GGFSVVNPTV  264 (272)
Q Consensus       224 ~~~~~~dva~~~~~l~s~~~~~-~~G~~i~~d--gG~~~~~~~~  264 (272)
                      +..+|+|+|.+++||+|+++.+ ..|+.+.+|  ||+....+.+
T Consensus      2362 r~~~PeEIA~avlfLaS~~a~~~~~~~p~~vdl~GG~~~~~~~~ 2405 (3089)
T 3zen_D         2362 TTYTTDEMAAMLLDLCTVETKVAAAGAPVKVDLTGGLGDIKIDM 2405 (3089)
T ss_dssp             BCEEHHHHHHHHHHTTSHHHHHHHHHSCEEEECSBSCSSCCCCH
T ss_pred             CCCCHHHHHHHHHHHhChhhhhHhcCCeEEEEcCCCcCcCCCCH
Confidence            3459999999999999987655 556767766  9996543443

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.97  E-value=2.1e-29  Score=229.95  Aligned_cols=212  Identities=17%  Similarity=0.257  Sum_probs=170.7

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcc---hHHHHHHH---hCCceEEEEecCCCHHHHHHHHHHHHHH
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQDK---LGEDLADK---LGQDVCYIHCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~---~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (272)
                      .+|++|||||++|||++++++|+++|+ +|++++|+..   ..+++.++   .+.++.++.||++|.++++++++++.++
T Consensus       238 ~~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~  317 (496)
T 3mje_A          238 VHGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPED  317 (496)
T ss_dssp             CCSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTT
T ss_pred             CCCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHh
Confidence            469999999999999999999999999 7899998743   23444433   4678999999999999999999988776


Q ss_pred             hCCccEEEeCCCCC-CCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhh
Q 024145           87 FGKLDIMYNNAGIL-DRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTI  165 (272)
Q Consensus        87 ~g~id~lv~~ag~~-~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~  165 (272)
                       +++|+||||||+. ..  ..+.+.+.+++++++++|+.+++++.+.+.+.    ..++||++||..+..+.+++..|++
T Consensus       318 -g~ld~vVh~AGv~~~~--~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~----~~~~iV~~SS~a~~~g~~g~~~YaA  390 (496)
T 3mje_A          318 -APLTAVFHSAGVAHDD--APVADLTLGQLDALMRAKLTAARHLHELTADL----DLDAFVLFSSGAAVWGSGGQPGYAA  390 (496)
T ss_dssp             -SCEEEEEECCCCCCSC--CCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTS----CCSEEEEEEEHHHHTTCTTCHHHHH
T ss_pred             -CCCeEEEECCcccCCC--CCcccCCHHHHHHHHHHHHHHHHHHHHHhhcc----CCCEEEEEeChHhcCCCCCcHHHHH
Confidence             6899999999987 44  77899999999999999999999998877653    4578999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCC
Q 024145          166 SKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDES  243 (272)
Q Consensus       166 sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  243 (272)
                      ||+++++|++.++    ++||++++|+||++.++.....   . ...+.+....   -..++|++.+.++.+++..+.
T Consensus       391 aKa~ldala~~~~----~~Gi~v~sV~pG~w~~~gm~~~---~-~~~~~l~~~g---~~~l~pe~~~~~l~~~l~~~~  457 (496)
T 3mje_A          391 ANAYLDALAEHRR----SLGLTASSVAWGTWGEVGMATD---P-EVHDRLVRQG---VLAMEPEHALGALDQMLENDD  457 (496)
T ss_dssp             HHHHHHHHHHHHH----HTTCCCEEEEECEESSSCC----------CHHHHHTT---EEEECHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHH----hcCCeEEEEECCcccCCccccC---h-HHHHHHHhcC---CCCCCHHHHHHHHHHHHcCCC
Confidence            9999999887554    4699999999998877654321   1 1112222211   134689999999999886543

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.97  E-value=5.9e-30  Score=246.03  Aligned_cols=214  Identities=14%  Similarity=0.205  Sum_probs=173.8

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHH-HcCC-eEEEeecCc---chHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHH
Q 024145           14 EGKVAIITGGASGIGAMAVELFH-ENGA-KVVIADVQD---KLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVS   85 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la-~~G~-~V~~~~r~~---~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (272)
                      .+|++|||||++|||++++++|+ ++|+ +|++++|+.   +..+++.+++   +.++.++.||++|.++++++++++.+
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~  608 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPD  608 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            68999999999999999999999 7999 599999983   3445555444   67899999999999999999999887


Q ss_pred             HhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhh
Q 024145           86 KFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTI  165 (272)
Q Consensus        86 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~  165 (272)
                      ++ ++|+||||||+...  ..+.+.+.++|++++++|+.|++++.+++.+.|      +||++||..+..+.+++..|++
T Consensus       609 ~~-~id~lVnnAGv~~~--~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l------~iV~~SS~ag~~g~~g~~~YaA  679 (795)
T 3slk_A          609 EH-PLTAVVHAAGVLDD--GVSESLTVERLDQVLRPKVDGARNLLELIDPDV------ALVLFSSVSGVLGSGGQGNYAA  679 (795)
T ss_dssp             TS-CEEEEEECCCCCCC--CCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS------EEEEEEETHHHHTCSSCHHHHH
T ss_pred             hC-CCEEEEECCCcCCC--CchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC------EEEEEccHHhcCCCCCCHHHHH
Confidence            76 89999999999876  789999999999999999999999999987766      6999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCC
Q 024145          166 SKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSY  245 (272)
Q Consensus       166 sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  245 (272)
                      ||+    |+++++++++++||++|+|+||++.|++...  ...+...+.+....   ...+++++....+...+..+...
T Consensus       680 aka----~~~alA~~~~~~Gi~v~sI~pG~v~t~g~~~--~~~~~~~~~~~~~g---~~~l~~~e~~~~~~~~l~~~~~~  750 (795)
T 3slk_A          680 ANS----FLDALAQQRQSRGLPTRSLAWGPWAEHGMAS--TLREAEQDRLARSG---LLPISTEEGLSQFDAACGGAHTV  750 (795)
T ss_dssp             HHH----HHHHHHHHHHHTTCCEEEEEECCCSCCCHHH--HHHHHHHHHHHHTT---BCCCCHHHHHHHHHHHHTSSCSS
T ss_pred             HHH----HHHHHHHHHHHcCCeEEEEECCeECcchhhc--cccHHHHHHHHhcC---CCCCCHHHHHHHHHHHHhCCCcE
Confidence            995    6666777777789999999999999886541  11111222222221   23467888888877776554433

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.96  E-value=3.1e-29  Score=208.60  Aligned_cols=208  Identities=13%  Similarity=0.142  Sum_probs=159.0

Q ss_pred             CccCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCce-EEEEecCCCHHHHHHHHHHHHH
Q 024145            7 AAPFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDV-CYIHCDISNEDEVINLVDTAVS   85 (272)
Q Consensus         7 ~~~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~   85 (272)
                      +..+.+++||++|||||+|+||++++++|+++|++|++++|+++..+++.+   .++ .++.+|++         +.+.+
T Consensus        13 ~~~~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~---~~~~~~~~~Dl~---------~~~~~   80 (236)
T 3e8x_A           13 GRENLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE---RGASDIVVANLE---------EDFSH   80 (236)
T ss_dssp             --------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH---TTCSEEEECCTT---------SCCGG
T ss_pred             cccccCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh---CCCceEEEcccH---------HHHHH
Confidence            345678999999999999999999999999999999999999887765543   367 89999998         23444


Q ss_pred             HhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccC---CCCch
Q 024145           86 KFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAG---LGSPA  162 (272)
Q Consensus        86 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~---~~~~~  162 (272)
                      .++++|+||||||....          +++++.+++|+.+++.+++++..    .+.++||++||..+..+.   +....
T Consensus        81 ~~~~~D~vi~~ag~~~~----------~~~~~~~~~n~~~~~~l~~a~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~  146 (236)
T 3e8x_A           81 AFASIDAVVFAAGSGPH----------TGADKTILIDLWGAIKTIQEAEK----RGIKRFIMVSSVGTVDPDQGPMNMRH  146 (236)
T ss_dssp             GGTTCSEEEECCCCCTT----------SCHHHHHHTTTHHHHHHHHHHHH----HTCCEEEEECCTTCSCGGGSCGGGHH
T ss_pred             HHcCCCEEEECCCCCCC----------CCccccchhhHHHHHHHHHHHHH----cCCCEEEEEecCCCCCCCCChhhhhh
Confidence            55689999999996432          35788999999999999998855    345789999997766553   45678


Q ss_pred             hhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCC
Q 024145          163 YTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDE  242 (272)
Q Consensus       163 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  242 (272)
                      |+.+|++++.+++       ..|+++++++||++.++......   .    ... .......+.+++|+|++++++++++
T Consensus       147 Y~~sK~~~e~~~~-------~~gi~~~~lrpg~v~~~~~~~~~---~----~~~-~~~~~~~~i~~~Dva~~~~~~~~~~  211 (236)
T 3e8x_A          147 YLVAKRLADDELK-------RSSLDYTIVRPGPLSNEESTGKV---T----VSP-HFSEITRSITRHDVAKVIAELVDQQ  211 (236)
T ss_dssp             HHHHHHHHHHHHH-------HSSSEEEEEEECSEECSCCCSEE---E----EES-SCSCCCCCEEHHHHHHHHHHHTTCG
T ss_pred             HHHHHHHHHHHHH-------HCCCCEEEEeCCcccCCCCCCeE---E----ecc-CCCcccCcEeHHHHHHHHHHHhcCc
Confidence            9999999999876       36899999999999998654210   0    000 1111257789999999999999765


Q ss_pred             CCCccccEEEecCce
Q 024145          243 SSYVSGQNLVVDGGF  257 (272)
Q Consensus       243 ~~~~~G~~i~~dgG~  257 (272)
                      .  ..|+.|++++|.
T Consensus       212 ~--~~g~~~~v~~~~  224 (236)
T 3e8x_A          212 H--TIGKTFEVLNGD  224 (236)
T ss_dssp             G--GTTEEEEEEECS
T ss_pred             c--ccCCeEEEeCCC
Confidence            3  689999998884

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.96  E-value=8.7e-28  Score=219.64  Aligned_cols=210  Identities=15%  Similarity=0.197  Sum_probs=167.8

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCe-EEEeecCcc---hHHHHHH---HhCCceEEEEecCCCHHHHHHHHHHHHHH
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAK-VVIADVQDK---LGEDLAD---KLGQDVCYIHCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~-V~~~~r~~~---~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (272)
                      .+|++|||||+||||++++++|+++|++ |++++|+..   ..+++.+   ..+.++.++.||++|.++++++++.+ ++
T Consensus       225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i-~~  303 (486)
T 2fr1_A          225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI-GD  303 (486)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS-CT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHH-Hh
Confidence            5799999999999999999999999995 999999865   2334433   33678999999999999999999988 56


Q ss_pred             hCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhh
Q 024145           87 FGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTIS  166 (272)
Q Consensus        87 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~s  166 (272)
                      ++++|+||||||....  +.+.+.+.+++++++++|+.+++++.+.+.+    .+.++||++||..+..+.+++..|+++
T Consensus       304 ~g~ld~VIh~AG~~~~--~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~----~~~~~~V~~SS~a~~~g~~g~~~Yaaa  377 (486)
T 2fr1_A          304 DVPLSAVFHAAATLDD--GTVDTLTGERIERASRAKVLGARNLHELTRE----LDLTAFVLFSSFASAFGAPGLGGYAPG  377 (486)
T ss_dssp             TSCEEEEEECCCCCCC--CCGGGCCHHHHHHHTHHHHHHHHHHHHHHTT----SCCSEEEEEEEHHHHTCCTTCTTTHHH
T ss_pred             cCCCcEEEECCccCCC--CccccCCHHHHHHHHHHHHHHHHHHHHHhCc----CCCCEEEEEcChHhcCCCCCCHHHHHH
Confidence            6899999999998765  6788899999999999999999999987644    356899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCC-cccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCC
Q 024145          167 KYGILGLVKCLAAELGQYGIRVNCVSPYGLATG-MSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDES  243 (272)
Q Consensus       167 K~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  243 (272)
                      |++++.|++.++    .+|+++++|+||++.++ |...      .....   ........++++|++.++..++....
T Consensus       378 ka~l~~la~~~~----~~gi~v~~i~pG~~~~~gm~~~------~~~~~---~~~~g~~~i~~e~~a~~l~~~l~~~~  442 (486)
T 2fr1_A          378 NAYLDGLAQQRR----SDGLPATAVAWGTWAGSGMAEG------PVADR---FRRHGVIEMPPETACRALQNALDRAE  442 (486)
T ss_dssp             HHHHHHHHHHHH----HTTCCCEEEEECCBC---------------------CTTTTEECBCHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHH----hcCCeEEEEECCeeCCCcccch------hHHHH---HHhcCCCCCCHHHHHHHHHHHHhCCC
Confidence            999999876554    45999999999999886 3321      00111   11111245799999999999886543

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.96  E-value=8.6e-28  Score=203.69  Aligned_cols=184  Identities=17%  Similarity=0.185  Sum_probs=153.2

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDI   92 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   92 (272)
                      |++|++|||||+||||++++++|+++|++|++++|++...+      +.++.++.+|++|.++++++++       ++|+
T Consensus         1 m~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~------~~~~~~~~~Dl~d~~~~~~~~~-------~~D~   67 (267)
T 3rft_A            1 MAMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA------GPNEECVQCDLADANAVNAMVA-------GCDG   67 (267)
T ss_dssp             CCEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC------CTTEEEEECCTTCHHHHHHHHT-------TCSE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc------CCCCEEEEcCCCCHHHHHHHHc-------CCCE
Confidence            35789999999999999999999999999999999876543      4679999999999999988776       6899


Q ss_pred             EEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccccc------------ccCCCC
Q 024145           93 MYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTE------------IAGLGS  160 (272)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~------------~~~~~~  160 (272)
                      ||||||...          .+.+++.+++|+.+++.+++++.+    .+.++||++||..+.            .+.+..
T Consensus        68 vi~~Ag~~~----------~~~~~~~~~~N~~g~~~l~~a~~~----~~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~  133 (267)
T 3rft_A           68 IVHLGGISV----------EKPFEQILQGNIIGLYNLYEAARA----HGQPRIVFASSNHTIGYYPQTERLGPDVPARPD  133 (267)
T ss_dssp             EEECCSCCS----------CCCHHHHHHHHTHHHHHHHHHHHH----TTCCEEEEEEEGGGGTTSBTTSCBCTTSCCCCC
T ss_pred             EEECCCCcC----------cCCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEcchHHhCCCCCCCCCCCCCCCCCC
Confidence            999999742          235788999999999999999855    456899999998776            334556


Q ss_pred             chhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhc
Q 024145          161 PAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLAS  240 (272)
Q Consensus       161 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  240 (272)
                      ..|+.||++++.+++.++.++   |+++++|+||.+.++....     ..           ...+..++|++..+..++.
T Consensus       134 ~~Y~~sK~~~e~~~~~~a~~~---g~~~~~vr~~~v~~~~~~~-----~~-----------~~~~~~~~d~a~~~~~~~~  194 (267)
T 3rft_A          134 GLYGVSKCFGENLARMYFDKF---GQETALVRIGSCTPEPNNY-----RM-----------LSTWFSHDDFVSLIEAVFR  194 (267)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECBCSSSCCST-----TH-----------HHHBCCHHHHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHHHHHHh---CCeEEEEEeecccCCCCCC-----Cc-----------eeeEEcHHHHHHHHHHHHh
Confidence            789999999999999999885   7899999999999876431     11           1245789999999998886


Q ss_pred             CC
Q 024145          241 DE  242 (272)
Q Consensus       241 ~~  242 (272)
                      .+
T Consensus       195 ~~  196 (267)
T 3rft_A          195 AP  196 (267)
T ss_dssp             CS
T ss_pred             CC
Confidence            54

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.95  E-value=6.7e-27  Score=214.69  Aligned_cols=206  Identities=22%  Similarity=0.299  Sum_probs=167.8

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcc---hHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQDK---LGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~---~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (272)
                      .+|++|||||+||||++++++|+++|+ +|++++|+..   ..+++.+++   +.++.++.||++|.++++++++.    
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~----  333 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTA----  333 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHH----
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhc----
Confidence            579999999999999999999999999 6999999864   234444433   56799999999999999988876    


Q ss_pred             hCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhh
Q 024145           87 FGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTIS  166 (272)
Q Consensus        87 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~s  166 (272)
                       +++|+||||||+...  ..+.+.+.+++++++++|+.+++++.+.+.+.   .+.++||++||..+..+.+++..|+++
T Consensus       334 -~~ld~VVh~AGv~~~--~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~---~~~~~~V~~SS~a~~~g~~g~~~Yaaa  407 (511)
T 2z5l_A          334 -YPPNAVFHTAGILDD--AVIDTLSPESFETVRGAKVCGAELLHQLTADI---KGLDAFVLFSSVTGTWGNAGQGAYAAA  407 (511)
T ss_dssp             -SCCSEEEECCCCCCC--BCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSC---TTCCCEEEEEEGGGTTCCTTBHHHHHH
T ss_pred             -CCCcEEEECCcccCC--cccccCCHHHHHHHHHHHHHHHHHHHHHHhhc---cCCCEEEEEeCHHhcCCCCCCHHHHHH
Confidence             689999999998765  67788999999999999999999998865432   145789999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEEeCCcc-cCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCC
Q 024145          167 KYGILGLVKCLAAELGQYGIRVNCVSPYGL-ATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDE  242 (272)
Q Consensus       167 K~a~~~~~~~la~e~~~~gi~v~~i~Pg~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  242 (272)
                      |++++.|++.+    ...|+++++|+||++ +|+|...    ..  ...+....   ...++|+++++++..++...
T Consensus       408 Ka~ld~la~~~----~~~gi~v~sv~pG~~~~tgm~~~----~~--~~~~~~~g---~~~l~~e~~a~~l~~al~~~  471 (511)
T 2z5l_A          408 NAALDALAERR----RAAGLPATSVAWGLWGGGGMAAG----AG--EESLSRRG---LRAMDPDAAVDALLGAMGRN  471 (511)
T ss_dssp             HHHHHHHHHHH----HTTTCCCEEEEECCBCSTTCCCC----HH--HHHHHHHT---BCCBCHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHH----HHcCCcEEEEECCcccCCccccc----cc--HHHHHhcC---CCCCCHHHHHHHHHHHHhCC
Confidence            99999998865    356999999999998 7777642    11  11121111   24589999999999988654

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.95  E-value=1.1e-26  Score=203.88  Aligned_cols=221  Identities=13%  Similarity=0.105  Sum_probs=172.4

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHc-CC-eEEEeecCcchHHHHHHHhC-CceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHEN-GA-KVVIADVQDKLGEDLADKLG-QDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~-G~-~V~~~~r~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      ..+++|++|||||+|+||++++++|+++ |+ +|++++|++...+.+.+.+. .++.++.+|++|.++++++++      
T Consensus        17 ~~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~------   90 (344)
T 2gn4_A           17 NMLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALE------   90 (344)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTT------
T ss_pred             HhhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHh------
Confidence            3368999999999999999999999999 98 99999998877766666553 579999999999999877664      


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhH
Q 024145           88 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISK  167 (272)
Q Consensus        88 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK  167 (272)
                       ++|+|||+||....+      .......+.+++|+.++.++++++.+.    +.++||++||..+..   ....|+.||
T Consensus        91 -~~D~Vih~Aa~~~~~------~~~~~~~~~~~~Nv~gt~~l~~aa~~~----~v~~~V~~SS~~~~~---p~~~Y~~sK  156 (344)
T 2gn4_A           91 -GVDICIHAAALKHVP------IAEYNPLECIKTNIMGASNVINACLKN----AISQVIALSTDKAAN---PINLYGATK  156 (344)
T ss_dssp             -TCSEEEECCCCCCHH------HHHHSHHHHHHHHHHHHHHHHHHHHHT----TCSEEEEECCGGGSS---CCSHHHHHH
T ss_pred             -cCCEEEECCCCCCCC------chhcCHHHHHHHHHHHHHHHHHHHHhC----CCCEEEEecCCccCC---CccHHHHHH
Confidence             699999999975321      122345689999999999999999874    456899999976644   357899999


Q ss_pred             HHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhc--C-----CCCCCCCChHhHHHHHHHHhc
Q 024145          168 YGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQM--G-----NLKGEFLKTDGIANAALYLAS  240 (272)
Q Consensus       168 ~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~--~-----~~~~~~~~~~dva~~~~~l~s  240 (272)
                      ++++.+++.++.++++.|+++++++||.+.++...   ..+..........  .     ...+.+++++|+|+++++++.
T Consensus       157 ~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~~---~i~~~~~~~~~g~~~~~i~~~~~~r~~i~v~D~a~~v~~~l~  233 (344)
T 2gn4_A          157 LCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRGS---VVPFFKKLVQNKASEIPITDIRMTRFWITLDEGVSFVLKSLK  233 (344)
T ss_dssp             HHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTTS---HHHHHHHHHHHTCCCEEESCTTCEEEEECHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCCC---HHHHHHHHHHcCCCceEEeCCCeEEeeEEHHHHHHHHHHHHh
Confidence            99999999999988888999999999999987532   1112222221111  0     111347899999999999987


Q ss_pred             CCCCCccccEEEecCce
Q 024145          241 DESSYVSGQNLVVDGGF  257 (272)
Q Consensus       241 ~~~~~~~G~~i~~dgG~  257 (272)
                      ...   .|+.+.++++.
T Consensus       234 ~~~---~g~~~~~~~~~  247 (344)
T 2gn4_A          234 RMH---GGEIFVPKIPS  247 (344)
T ss_dssp             HCC---SSCEEEECCCE
T ss_pred             hcc---CCCEEecCCCc
Confidence            542   68888888764

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.95  E-value=4.7e-27  Score=203.75  Aligned_cols=222  Identities=16%  Similarity=0.100  Sum_probs=168.4

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDI   92 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   92 (272)
                      .+-|++|||||+|+||++++++|+++|++|++++|+... +.    +  ++.++.+|++|+++++++++.     +++|+
T Consensus        10 ~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----l--~~~~~~~Dl~d~~~~~~~~~~-----~~~d~   77 (321)
T 2pk3_A           10 HGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----P--NVEMISLDIMDSQRVKKVISD-----IKPDY   77 (321)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----T--TEEEEECCTTCHHHHHHHHHH-----HCCSE
T ss_pred             cCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----c--eeeEEECCCCCHHHHHHHHHh-----cCCCE
Confidence            355899999999999999999999999999999998654 21    2  688999999999999888775     36999


Q ss_pred             EEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccccccc-------------CCC
Q 024145           93 MYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIA-------------GLG  159 (272)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~-------------~~~  159 (272)
                      |||+||....      ..+.+++++.+++|+.++..+++++ +.+  .+.++||++||......             ...
T Consensus        78 vih~A~~~~~------~~~~~~~~~~~~~Nv~g~~~l~~a~-~~~--~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~~  148 (321)
T 2pk3_A           78 IFHLAAKSSV------KDSWLNKKGTFSTNVFGTLHVLDAV-RDS--NLDCRILTIGSSEEYGMILPEESPVSEENQLRP  148 (321)
T ss_dssp             EEECCSCCCH------HHHTTCHHHHHHHHHHHHHHHHHHH-HHH--TCCCEEEEEEEGGGTBSCCGGGCSBCTTSCCBC
T ss_pred             EEEcCcccch------hhhhhcHHHHHHHHHHHHHHHHHHH-HHh--CCCCeEEEEccHHhcCCCCCCCCCCCCCCCCCC
Confidence            9999997532      1123457889999999999999988 544  24578999999865432             235


Q ss_pred             CchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHh---h---c------CCCCCCCCC
Q 024145          160 SPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMS---Q---M------GNLKGEFLK  227 (272)
Q Consensus       160 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~---~---~------~~~~~~~~~  227 (272)
                      ...|+.||++.+.+++.++.++   |+++++++|+.+.+|........+........   .   .      ......+.+
T Consensus       149 ~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~  225 (321)
T 2pk3_A          149 MSPYGVSKASVGMLARQYVKAY---GMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTD  225 (321)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEE
T ss_pred             CCccHHHHHHHHHHHHHHHHHc---CCCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEE
Confidence            6789999999999999999884   89999999999999876531111112222222   1   0      001245788


Q ss_pred             hHhHHHHHHHHhcCCCCCccccEEEecCceeecc
Q 024145          228 TDGIANAALYLASDESSYVSGQNLVVDGGFSVVN  261 (272)
Q Consensus       228 ~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~  261 (272)
                      ++|+|++++++++..   .+|+.|++++|..+..
T Consensus       226 v~Dva~a~~~~~~~~---~~g~~~~i~~~~~~s~  256 (321)
T 2pk3_A          226 VRDIVQAYWLLSQYG---KTGDVYNVCSGIGTRI  256 (321)
T ss_dssp             HHHHHHHHHHHHHHC---CTTCEEEESCSCEEEH
T ss_pred             HHHHHHHHHHHHhCC---CCCCeEEeCCCCCeeH
Confidence            999999999998764   3789999999976643

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.95  E-value=1.1e-26  Score=202.96  Aligned_cols=234  Identities=13%  Similarity=0.068  Sum_probs=170.9

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHH----hCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADK----LGQDVCYIHCDISNEDEVINLVDTAVSKFGK   89 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (272)
                      .+|++|||||+|+||++++++|+++|++|++++|+.....+..+.    .+.++.++.+|++|+++++++++.     ++
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~   78 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDA-----HP   78 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHH-----SC
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhc-----cC
Confidence            467999999999999999999999999999999977655444333    256889999999999999888875     47


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccc-----------cCC
Q 024145           90 LDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEI-----------AGL  158 (272)
Q Consensus        90 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~-----------~~~  158 (272)
                      +|+|||+||....      ....+...+.+++|+.++..+++++..    .+.++||++||.....           +..
T Consensus        79 ~d~vih~A~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~  148 (341)
T 3enk_A           79 ITAAIHFAALKAV------GESVAKPIEYYRNNLDSLLSLLRVMRE----RAVKRIVFSSSATVYGVPERSPIDETFPLS  148 (341)
T ss_dssp             CCEEEECCCCCCH------HHHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGGBCSCSSSSBCTTSCCB
T ss_pred             CcEEEECcccccc------CccccChHHHHHHHHHHHHHHHHHHHh----CCCCEEEEEecceEecCCCCCCCCCCCCCC
Confidence            9999999997542      112344567889999999998887654    4567999999976542           122


Q ss_pred             CCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCC---------CChhHHHHHHhhc-C---------
Q 024145          159 GSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGG---------VDPALIESSMSQM-G---------  219 (272)
Q Consensus       159 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~---------~~~~~~~~~~~~~-~---------  219 (272)
                      ....|+.||.+.+.+++.++.++.  ++++++++|+.+.+|......         ............. .         
T Consensus       149 ~~~~Y~~sK~~~e~~~~~~~~~~~--~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  226 (341)
T 3enk_A          149 ATNPYGQTKLMAEQILRDVEAADP--SWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDY  226 (341)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHCT--TCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCS
T ss_pred             CCChhHHHHHHHHHHHHHHhhcCC--CceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCcc
Confidence            336899999999999999999853  599999999999887532100         0011112211111 1         


Q ss_pred             -----CCCCCCCChHhHHHHHHHHhcCCCCCccccEEEecCceeeccCcc
Q 024145          220 -----NLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVVNPTV  264 (272)
Q Consensus       220 -----~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~~  264 (272)
                           .....+..++|+|+++++++........|+.|++++|..+..-.+
T Consensus       227 ~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~  276 (341)
T 3enk_A          227 PTPDGTGVRDYIHVVDLARGHIAALDALERRDASLTVNLGTGRGYSVLEV  276 (341)
T ss_dssp             SSTTSSCEECEEEHHHHHHHHHHHHHHHHHHTSCEEEEESCSCCEEHHHH
T ss_pred             CCCCCCeeEeeEEHHHHHHHHHHHHHhhhcCCcceEEEeCCCCceeHHHH
Confidence                 111346788999999999886522234689999999987654333

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.95  E-value=1.2e-26  Score=202.30  Aligned_cols=224  Identities=16%  Similarity=0.102  Sum_probs=166.5

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcC--CeEEEeecCcc--hHHHHHHHh--CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENG--AKVVIADVQDK--LGEDLADKL--GQDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G--~~V~~~~r~~~--~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      +++++|||||+|+||++++++|+++|  ++|++++|+..  ..+.+ +.+  +.++.++.+|++|.+++++++.      
T Consensus         2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   74 (336)
T 2hun_A            2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANL-KDLEDDPRYTFVKGDVADYELVKELVR------   74 (336)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGG-TTTTTCTTEEEEECCTTCHHHHHHHHH------
T ss_pred             CCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHH-hhhccCCceEEEEcCCCCHHHHHHHhh------
Confidence            45689999999999999999999997  89999988642  12222 222  3478999999999999888772      


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccc-----------c
Q 024145           88 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEI-----------A  156 (272)
Q Consensus        88 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~-----------~  156 (272)
                       ++|+|||+||....      +.+.+++++.+++|+.++..+++++.+.   ...++||++||.....           +
T Consensus        75 -~~d~vih~A~~~~~------~~~~~~~~~~~~~Nv~g~~~l~~a~~~~---~~~~~iv~~SS~~vyg~~~~~~~~E~~~  144 (336)
T 2hun_A           75 -KVDGVVHLAAESHV------DRSISSPEIFLHSNVIGTYTLLESIRRE---NPEVRFVHVSTDEVYGDILKGSFTENDR  144 (336)
T ss_dssp             -TCSEEEECCCCCCH------HHHHHCTHHHHHHHHHHHHHHHHHHHHH---CTTSEEEEEEEGGGGCCCSSSCBCTTBC
T ss_pred             -CCCEEEECCCCcCh------hhhhhCHHHHHHHHHHHHHHHHHHHHHh---CCCcEEEEeccHHHHCCCCCCCcCCCCC
Confidence             79999999996432      1234567889999999999999999886   1247999999975422           2


Q ss_pred             CCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcC-C------CCCCCCChH
Q 024145          157 GLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMG-N------LKGEFLKTD  229 (272)
Q Consensus       157 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~-~------~~~~~~~~~  229 (272)
                      ......|+.||++.+.+++.++.++   |+++++++|+.+.+|........+........... +      ....+..++
T Consensus       145 ~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  221 (336)
T 2hun_A          145 LMPSSPYSATKAASDMLVLGWTRTY---NLNASITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGKNVRDWLYVE  221 (336)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHT---TCEEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCEEEETC---CEEEEEHH
T ss_pred             CCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEeeeeeeCcCCCcCchHHHHHHHHHcCCCceEeCCCCceeeeEEHH
Confidence            3455689999999999999999884   79999999999999885421111112222222110 0      114577899


Q ss_pred             hHHHHHHHHhcCCCCCccccEEEecCceeec
Q 024145          230 GIANAALYLASDESSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       230 dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~  260 (272)
                      |+|++++++++..   .+|+.|++++|..+.
T Consensus       222 Dva~~~~~~~~~~---~~g~~~~v~~~~~~s  249 (336)
T 2hun_A          222 DHVRAIELVLLKG---ESREIYNISAGEEKT  249 (336)
T ss_dssp             HHHHHHHHHHHHC---CTTCEEEECCSCEEC
T ss_pred             HHHHHHHHHHhCC---CCCCEEEeCCCCccc
Confidence            9999999988653   379999999997654

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.94  E-value=2.3e-26  Score=200.52  Aligned_cols=223  Identities=16%  Similarity=0.102  Sum_probs=161.3

Q ss_pred             ccCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145            8 APFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus         8 ~~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      .+..+++++++|||||+|+||++++++|+++|++|++++|+.....+..+.+ .++.++.+|++|.++++++++++    
T Consensus        13 ~~~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l-~~v~~~~~Dl~d~~~~~~~~~~~----   87 (330)
T 2pzm_A           13 GLVPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPV-AGLSVIEGSVTDAGLLERAFDSF----   87 (330)
T ss_dssp             -CCSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSC-TTEEEEECCTTCHHHHHHHHHHH----
T ss_pred             CCcccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhcc-CCceEEEeeCCCHHHHHHHHhhc----
Confidence            3456688999999999999999999999999999999999654432222222 46889999999999998888765    


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccC-----C----
Q 024145           88 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAG-----L----  158 (272)
Q Consensus        88 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~-----~----  158 (272)
                       ++|+|||+||....  .     +.++++  +++|+.+++.+++++..    .+.++||++||.......     +    
T Consensus        88 -~~D~vih~A~~~~~--~-----~~~~~~--~~~N~~~~~~l~~a~~~----~~~~~iV~~SS~~~~~~~~~~~~~~~E~  153 (330)
T 2pzm_A           88 -KPTHVVHSAAAYKD--P-----DDWAED--AATNVQGSINVAKAASK----AGVKRLLNFQTALCYGRPATVPIPIDSP  153 (330)
T ss_dssp             -CCSEEEECCCCCSC--T-----TCHHHH--HHHHTHHHHHHHHHHHH----HTCSEEEEEEEGGGGCSCSSSSBCTTCC
T ss_pred             -CCCEEEECCccCCC--c-----cccChh--HHHHHHHHHHHHHHHHH----cCCCEEEEecCHHHhCCCccCCCCcCCC
Confidence             79999999997543  1     345555  99999999999998875    245789999998765433     2    


Q ss_pred             --CCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCC----CCCCCChHhHH
Q 024145          159 --GSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNL----KGEFLKTDGIA  232 (272)
Q Consensus       159 --~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~dva  232 (272)
                        ....|+.+|++++.+++.+       ++....++|+.+..|... ..................    ...+.+++|+|
T Consensus       154 ~~~~~~Y~~sK~~~e~~~~~~-------~~~~~~iR~~~v~gp~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva  225 (330)
T 2pzm_A          154 TAPFTSYGISKTAGEAFLMMS-------DVPVVSLRLANVTGPRLA-IGPIPTFYKRLKAGQKCFCSDTVRDFLDMSDFL  225 (330)
T ss_dssp             CCCCSHHHHHHHHHHHHHHTC-------SSCEEEEEECEEECTTCC-SSHHHHHHHHHHTTCCCCEESCEECEEEHHHHH
T ss_pred             CCCCChHHHHHHHHHHHHHHc-------CCCEEEEeeeeeECcCCC-CCHHHHHHHHHHcCCEEeCCCCEecceeHHHHH
Confidence              5678999999999998876       455556666655555431 000011111111111000    25678999999


Q ss_pred             H-HHHHHhcCCCCCccccEEEecCceeecc
Q 024145          233 N-AALYLASDESSYVSGQNLVVDGGFSVVN  261 (272)
Q Consensus       233 ~-~~~~l~s~~~~~~~G~~i~~dgG~~~~~  261 (272)
                      + +++++++...    |+.|++++|..+..
T Consensus       226 ~~a~~~~~~~~~----g~~~~v~~~~~~s~  251 (330)
T 2pzm_A          226 AIADLSLQEGRP----TGVFNVSTGEGHSI  251 (330)
T ss_dssp             HHHHHHTSTTCC----CEEEEESCSCCEEH
T ss_pred             HHHHHHHhhcCC----CCEEEeCCCCCCCH
Confidence            9 9999987632    89999999976643

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.94  E-value=4.5e-27  Score=196.00  Aligned_cols=198  Identities=15%  Similarity=0.079  Sum_probs=150.9

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCC--eEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGA--KVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      +++|++|||||+||||++++++|+++|+  +|++++|+++..+...   ..++.++.+|++|+++++++++       ++
T Consensus        16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~---~~~~~~~~~D~~d~~~~~~~~~-------~~   85 (242)
T 2bka_A           16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA---YKNVNQEVVDFEKLDDYASAFQ-------GH   85 (242)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG---GGGCEEEECCGGGGGGGGGGGS-------SC
T ss_pred             hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc---cCCceEEecCcCCHHHHHHHhc-------CC
Confidence            6789999999999999999999999999  9999999876543221   1357889999999988876654       79


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHH
Q 024145           91 DIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGI  170 (272)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~  170 (272)
                      |+||||||....         .+.+++.+++|+.++..+++++.+    .+.++||++||..+..  +....|+.+|+++
T Consensus        86 d~vi~~ag~~~~---------~~~~~~~~~~n~~~~~~~~~~~~~----~~~~~iv~~SS~~~~~--~~~~~Y~~sK~~~  150 (242)
T 2bka_A           86 DVGFCCLGTTRG---------KAGAEGFVRVDRDYVLKSAELAKA----GGCKHFNLLSSKGADK--SSNFLYLQVKGEV  150 (242)
T ss_dssp             SEEEECCCCCHH---------HHHHHHHHHHHTHHHHHHHHHHHH----TTCCEEEEECCTTCCT--TCSSHHHHHHHHH
T ss_pred             CEEEECCCcccc---------cCCcccceeeeHHHHHHHHHHHHH----CCCCEEEEEccCcCCC--CCcchHHHHHHHH
Confidence            999999996432         245688999999999998887654    4557999999987654  3456899999999


Q ss_pred             HHHHHHHHHHhcCCCc-EEEEEeCCcccCCcccCCCCChhHHHHHHhhcCC---CCCCCCChHhHHHHHHHHhcCCCC
Q 024145          171 LGLVKCLAAELGQYGI-RVNCVSPYGLATGMSMKGGVDPALIESSMSQMGN---LKGEFLKTDGIANAALYLASDESS  244 (272)
Q Consensus       171 ~~~~~~la~e~~~~gi-~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~dva~~~~~l~s~~~~  244 (272)
                      +.+++.+       ++ ++++|+||++.|++...  ...+..........+   ..+++.+++|+|++++++++++..
T Consensus       151 e~~~~~~-------~~~~~~~vrpg~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~  219 (242)
T 2bka_A          151 EAKVEEL-------KFDRYSVFRPGVLLCDRQES--RPGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPRD  219 (242)
T ss_dssp             HHHHHTT-------CCSEEEEEECCEEECTTGGG--SHHHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTSCCC
T ss_pred             HHHHHhc-------CCCCeEEEcCceecCCCCCC--cHHHHHHHHhhcccCccccCCcccCHHHHHHHHHHHHhCccc
Confidence            9988754       45 79999999999997542  111111111111122   025788999999999999987653

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.94  E-value=1.4e-25  Score=196.29  Aligned_cols=224  Identities=15%  Similarity=0.125  Sum_probs=167.2

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCc-chHHHHHHHh--CCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Q 024145           16 KVAIITGGASGIGAMAVELFHENGAKVVIADVQD-KLGEDLADKL--GQDVCYIHCDISNEDEVINLVDTAVSKFGKLDI   92 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~~V~~~~r~~-~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   92 (272)
                      |++|||||+|+||++++++|+++|++|++++|+. .......+.+  ..++.++.+|++|+++++++++..     ++|+
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~   76 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKY-----MPDS   76 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHH-----CCSE
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhcc-----CCCE
Confidence            5799999999999999999999999999998853 2222222222  246889999999999998887752     6999


Q ss_pred             EEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccc-----------------
Q 024145           93 MYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEI-----------------  155 (272)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~-----------------  155 (272)
                      |||+||....      +.+.+++++.+++|+.++..+++++.+.+.   .++||++||.....                 
T Consensus        77 vih~A~~~~~------~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~---~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~  147 (347)
T 1orr_A           77 CFHLAGQVAM------TTSIDNPCMDFEINVGGTLNLLEAVRQYNS---NCNIIYSSTNKVYGDLEQYKYNETETRYTCV  147 (347)
T ss_dssp             EEECCCCCCH------HHHHHCHHHHHHHHHHHHHHHHHHHHHHCT---TCEEEEEEEGGGGTTCTTSCEEECSSCEEET
T ss_pred             EEECCcccCh------hhhhhCHHHHHHHHHHHHHHHHHHHHHhCC---CceEEEeccHHHhCCCCcCCccccccccccc
Confidence            9999996432      123456788999999999999999988763   26899999976432                 


Q ss_pred             ----------cCCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCC---ChhHHHHHHhhcC---
Q 024145          156 ----------AGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGV---DPALIESSMSQMG---  219 (272)
Q Consensus       156 ----------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~---~~~~~~~~~~~~~---  219 (272)
                                +......|+.||.+.+.+++.++.++   |+++++++||++.+|.......   .............   
T Consensus       148 ~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (347)
T 1orr_A          148 DKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF---GLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGIN  224 (347)
T ss_dssp             TCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCC
T ss_pred             ccccCccccCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCC
Confidence                      12345689999999999999999885   7999999999999997542110   0112222222210   


Q ss_pred             -CC--------CCCCCChHhHHHHHHHHhcCCCCCccccEEEecCce
Q 024145          220 -NL--------KGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGF  257 (272)
Q Consensus       220 -~~--------~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~  257 (272)
                       +.        ...+..++|+|+++++++.. ....+|+.|++++|.
T Consensus       225 ~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~-~~~~~g~~~~v~~~~  270 (347)
T 1orr_A          225 KPFTISGNGKQVRDVLHAEDMISLYFTALAN-VSKIRGNAFNIGGTI  270 (347)
T ss_dssp             CCEEEESSSCCEEECEEHHHHHHHHHHHHHT-HHHHTTCEEEESSCG
T ss_pred             CCeEEecCCcceEeeEEHHHHHHHHHHHHhc-cccCCCCEEEeCCCC
Confidence             11        12367899999999998863 234689999999985

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.94  E-value=1.6e-26  Score=203.52  Aligned_cols=227  Identities=18%  Similarity=0.155  Sum_probs=169.4

Q ss_pred             EEEEeCCCChHHHHHHHHHHHc-CCeEEEeecCc--chHHHHHHHh--CCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Q 024145           17 VAIITGGASGIGAMAVELFHEN-GAKVVIADVQD--KLGEDLADKL--GQDVCYIHCDISNEDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~-G~~V~~~~r~~--~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   91 (272)
                      ++|||||+|+||++++++|+++ |++|++++|+.  ...+.+ +++  +.++.++.+|++|.+++++++++.     ++|
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d   75 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESL-SDISESNRYNFEHADICDSAEITRIFEQY-----QPD   75 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGG-TTTTTCTTEEEEECCTTCHHHHHHHHHHH-----CCS
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhh-hhhhcCCCeEEEECCCCCHHHHHHHHhhc-----CCC
Confidence            5999999999999999999998 79999999864  222222 122  347899999999999998887752     799


Q ss_pred             EEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCC-----CceEEEEecccccc-----------
Q 024145           92 IMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ-----KGCILFTASACTEI-----------  155 (272)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~g~iv~iss~~~~~-----------  155 (272)
                      +|||+||....      +.+.+++++.+++|+.+++.+++++.+.|..-+     .++||++||.....           
T Consensus        76 ~vih~A~~~~~------~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~  149 (361)
T 1kew_A           76 AVMHLAAESHV------DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENS  149 (361)
T ss_dssp             EEEECCSCCCH------HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTT
T ss_pred             EEEECCCCcCh------hhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCccccccccc
Confidence            99999996431      223456788999999999999999999864321     35999999975321           


Q ss_pred             ----------cCCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcC-C----
Q 024145          156 ----------AGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMG-N----  220 (272)
Q Consensus       156 ----------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~-~----  220 (272)
                                +......|+.||++++.+++.++.++   |+++++++|+.+.+|........+........... +    
T Consensus       150 ~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (361)
T 1kew_A          150 VTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGK  226 (361)
T ss_dssp             SCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETT
T ss_pred             ccCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCcEEEEeeceeECCCCCcccHHHHHHHHHHcCCCceEcCC
Confidence                      12345689999999999999999885   79999999999999985421111112222222111 0    


Q ss_pred             --CCCCCCChHhHHHHHHHHhcCCCCCccccEEEecCceeecc
Q 024145          221 --LKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVVN  261 (272)
Q Consensus       221 --~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~  261 (272)
                        ....+..++|+|++++++++..   .+|+.|++++|..+..
T Consensus       227 ~~~~~~~i~v~Dva~a~~~~~~~~---~~g~~~~v~~~~~~s~  266 (361)
T 1kew_A          227 GDQIRDWLYVEDHARALHMVVTEG---KAGETYNIGGHNEKKN  266 (361)
T ss_dssp             SCCEEEEEEHHHHHHHHHHHHHHC---CTTCEEEECCCCEEEH
T ss_pred             CceeEeeEEHHHHHHHHHHHHhCC---CCCCEEEecCCCeeeH
Confidence              1145778999999999998654   3799999999986543

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.94  E-value=2.9e-26  Score=188.77  Aligned_cols=195  Identities=10%  Similarity=0.007  Sum_probs=148.2

Q ss_pred             cEEEEeCCCChHHHHHHHHHH-HcCCeEEEeecCcc-hHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           16 KVAIITGGASGIGAMAVELFH-ENGAKVVIADVQDK-LGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la-~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      |++|||||+|+||++++++|+ ++|++|++++|+++ ..+++. ..+.++.++.+|++|+++++++++       ++|+|
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~v   77 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI-IDHERVTVIEGSFQNPGXLEQAVT-------NAEVV   77 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH-HTSTTEEEEECCTTCHHHHHHHHT-------TCSEE
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc-cCCCceEEEECCCCCHHHHHHHHc-------CCCEE
Confidence            689999999999999999999 89999999999987 665543 235679999999999999888775       68999


Q ss_pred             EeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCc----------hh
Q 024145           94 YNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSP----------AY  163 (272)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~----------~Y  163 (272)
                      |||+|..                     |+.     ++.+++.+.+.+.++||++||..+..+.+...          .|
T Consensus        78 v~~ag~~---------------------n~~-----~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~~~~~~~~~~~~~y  131 (221)
T 3r6d_A           78 FVGAMES---------------------GSD-----MASIVKALSRXNIRRVIGVSMAGLSGEFPVALEKWTFDNLPISY  131 (221)
T ss_dssp             EESCCCC---------------------HHH-----HHHHHHHHHHTTCCEEEEEEETTTTSCSCHHHHHHHHHTSCHHH
T ss_pred             EEcCCCC---------------------Chh-----HHHHHHHHHhcCCCeEEEEeeceecCCCCcccccccccccccHH
Confidence            9999842                     222     66777777777778999999988776555433          89


Q ss_pred             hhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHh--cC
Q 024145          164 TISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLA--SD  241 (272)
Q Consensus       164 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~--s~  241 (272)
                      +.+|.+++.+.+.       .|+++++|+||++.++.......  .     .....+..+.+.+++|+|+++++++  ++
T Consensus       132 ~~~K~~~e~~~~~-------~~i~~~~vrpg~v~~~~~~~~~~--~-----~~~~~~~~~~~~~~~dvA~~~~~l~~~~~  197 (221)
T 3r6d_A          132 VQGERQARNVLRE-------SNLNYTILRLTWLYNDPEXTDYE--L-----IPEGAQFNDAQVSREAVVKAIFDILHAAD  197 (221)
T ss_dssp             HHHHHHHHHHHHH-------SCSEEEEEEECEEECCTTCCCCE--E-----ECTTSCCCCCEEEHHHHHHHHHHHHTCSC
T ss_pred             HHHHHHHHHHHHh-------CCCCEEEEechhhcCCCCCccee--e-----ccCCccCCCceeeHHHHHHHHHHHHHhcC
Confidence            9999999987753       58999999999998873221100  0     0011122245788999999999999  88


Q ss_pred             CCCCccccEEEecCcee
Q 024145          242 ESSYVSGQNLVVDGGFS  258 (272)
Q Consensus       242 ~~~~~~G~~i~~dgG~~  258 (272)
                      +..++++.+...+.+..
T Consensus       198 ~~~~~~~~~~i~~~~~~  214 (221)
T 3r6d_A          198 ETPFHRTSIGVGEPGTH  214 (221)
T ss_dssp             CGGGTTEEEEEECTTCC
T ss_pred             hhhhhcceeeecCCCCC
Confidence            87776555544444433

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.94  E-value=8.4e-26  Score=197.18  Aligned_cols=224  Identities=13%  Similarity=0.038  Sum_probs=167.7

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh----CCceEEE-EecCCCHHHHHHHHHHHHHH
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL----GQDVCYI-HCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~-~~D~~~~~~~~~~~~~~~~~   86 (272)
                      .+++|++|||||+|+||++++++|+++|++|++++|+....+.+.+.+    +.++.++ .+|++|.++++++++     
T Consensus         8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   82 (342)
T 1y1p_A            8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK-----   82 (342)
T ss_dssp             SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT-----
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHc-----
Confidence            368899999999999999999999999999999999877655444332    3578888 899999988776654     


Q ss_pred             hCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccc-cCC-------
Q 024145           87 FGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEI-AGL-------  158 (272)
Q Consensus        87 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~-~~~-------  158 (272)
                        ++|+|||+||....  .       +++.+.+++|+.++..+++++.+.   .+.++||++||..... +.+       
T Consensus        83 --~~d~vih~A~~~~~--~-------~~~~~~~~~n~~g~~~ll~~~~~~---~~~~~iv~~SS~~~~~~~~~~~~~~~~  148 (342)
T 1y1p_A           83 --GAAGVAHIASVVSF--S-------NKYDEVVTPAIGGTLNALRAAAAT---PSVKRFVLTSSTVSALIPKPNVEGIYL  148 (342)
T ss_dssp             --TCSEEEECCCCCSC--C-------SCHHHHHHHHHHHHHHHHHHHHTC---TTCCEEEEECCGGGTCCCCTTCCCCEE
T ss_pred             --CCCEEEEeCCCCCC--C-------CCHHHHHHHHHHHHHHHHHHHHhC---CCCcEEEEeccHHHhcCCCCCCCCccc
Confidence              69999999997543  1       245678999999999999988752   2457899999986652 111       


Q ss_pred             -----------------------CCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCC---hhHHH
Q 024145          159 -----------------------GSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVD---PALIE  212 (272)
Q Consensus       159 -----------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~---~~~~~  212 (272)
                                             ....|+.||.+.+.+++.++.+++. ++++++++|+.+.+|........   .....
T Consensus       149 ~E~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~-~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~  227 (342)
T 1y1p_A          149 DEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKP-HFTLNAVLPNYTIGTIFDPETQSGSTSGWMM  227 (342)
T ss_dssp             CTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCC-SSEEEEEEESEEECCCSCTTTCCCHHHHHHH
T ss_pred             CccccCchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCC-CceEEEEcCCceECCCCCCCCCCccHHHHHH
Confidence                                   1247999999999999999999876 89999999999999976532111   11122


Q ss_pred             HHHhhcC------CCCCCCCChHhHHHHHHHHhcCCCCCccccEEEecCce
Q 024145          213 SSMSQMG------NLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGF  257 (272)
Q Consensus       213 ~~~~~~~------~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~  257 (272)
                      .......      ...+.+.+++|+|++++.++...  ..+|+.+.++|+.
T Consensus       228 ~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~--~~~g~~~~~~g~~  276 (342)
T 1y1p_A          228 SLFNGEVSPALALMPPQYYVSAVDIGLLHLGCLVLP--QIERRRVYGTAGT  276 (342)
T ss_dssp             HHHTTCCCHHHHTCCSEEEEEHHHHHHHHHHHHHCT--TCCSCEEEECCEE
T ss_pred             HHHcCCCccccccCCcCCEeEHHHHHHHHHHHHcCc--ccCCceEEEeCCC
Confidence            2211110      01256789999999999988653  3468877777653

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.94  E-value=1.6e-25  Score=196.68  Aligned_cols=229  Identities=18%  Similarity=0.094  Sum_probs=172.0

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcch----HHHHHHHh----CCceEEEEecCCCHHHHHHHHHHH
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKL----GEDLADKL----GQDVCYIHCDISNEDEVINLVDTA   83 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~----~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~   83 (272)
                      +++++++|||||+|+||++++++|+++|++|++++|+...    .+.+.+.+    +.++.++.+|++|.++++++++  
T Consensus        24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--  101 (352)
T 1sb8_A           24 PAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA--  101 (352)
T ss_dssp             HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT--
T ss_pred             CccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhc--
Confidence            3678899999999999999999999999999999987642    23332222    2578999999999999887765  


Q ss_pred             HHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCC-----
Q 024145           84 VSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGL-----  158 (272)
Q Consensus        84 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~-----  158 (272)
                           ++|+|||+||.....      .+.+++++.+++|+.++..+++++.+.    +.++||++||.....+.+     
T Consensus       102 -----~~d~vih~A~~~~~~------~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~v~~SS~~~~~~~~~~~~~  166 (352)
T 1sb8_A          102 -----GVDYVLHQAALGSVP------RSINDPITSNATNIDGFLNMLIAARDA----KVQSFTYAASSSTYGDHPGLPKV  166 (352)
T ss_dssp             -----TCSEEEECCSCCCHH------HHHHCHHHHHHHHTHHHHHHHHHHHHT----TCSEEEEEEEGGGGTTCCCSSBC
T ss_pred             -----CCCEEEECCcccCch------hhhhCHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEeccHHhcCCCCCCCCC
Confidence                 799999999964321      134668889999999999999988763    457899999987654332     


Q ss_pred             ------CCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCC--C--hhHHHHHHhhcCC-------C
Q 024145          159 ------GSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGV--D--PALIESSMSQMGN-------L  221 (272)
Q Consensus       159 ------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~--~--~~~~~~~~~~~~~-------~  221 (272)
                            ....|+.+|.+.+.+++.++.++   |+++++++||.+.+|.......  .  +............       .
T Consensus       167 E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~  243 (352)
T 1sb8_A          167 EDTIGKPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGET  243 (352)
T ss_dssp             TTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCC
T ss_pred             CCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCc
Confidence                  35689999999999999999885   7999999999999987642210  1  1122222222111       1


Q ss_pred             CCCCCChHhHHHHHHHHhcCCCCCccccEEEecCceeecc
Q 024145          222 KGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVVN  261 (272)
Q Consensus       222 ~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~  261 (272)
                      ...+..++|+|+++++++... ....|+.|++++|..+..
T Consensus       244 ~~~~i~v~Dva~a~~~~~~~~-~~~~~~~~ni~~~~~~s~  282 (352)
T 1sb8_A          244 SRDFCYIENTVQANLLAATAG-LDARNQVYNIAVGGRTSL  282 (352)
T ss_dssp             EECCEEHHHHHHHHHHHHTCC-GGGCSEEEEESCSCCEEH
T ss_pred             eEeeEEHHHHHHHHHHHHhcc-ccCCCceEEeCCCCCccH
Confidence            135788999999999888652 235789999999876543

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.94  E-value=2.2e-25  Score=196.14  Aligned_cols=230  Identities=14%  Similarity=0.045  Sum_probs=170.8

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh--CCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL--GQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      ++++++|||||+|+||++++++|+++|++|++++|+......+.+.+  +.++.++.+|++|+++++++++..     ++
T Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~   81 (357)
T 1rkx_A            7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREF-----QP   81 (357)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhc-----CC
Confidence            57899999999999999999999999999999999876554444333  457899999999999998888765     69


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccc------------cCC
Q 024145           91 DIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEI------------AGL  158 (272)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~------------~~~  158 (272)
                      |+|||+||...      .+.+.+++.+.+++|+.++..+++++.+.   ...++||++||.....            +..
T Consensus        82 d~vih~A~~~~------~~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~~  152 (357)
T 1rkx_A           82 EIVFHMAAQPL------VRLSYSEPVETYSTNVMGTVYLLEAIRHV---GGVKAVVNITSDKCYDNKEWIWGYRENEAMG  152 (357)
T ss_dssp             SEEEECCSCCC------HHHHHHCHHHHHHHHTHHHHHHHHHHHHH---CCCCEEEEECCGGGBCCCCSSSCBCTTSCBC
T ss_pred             CEEEECCCCcc------cccchhCHHHHHHHHHHHHHHHHHHHHHh---CCCCeEEEecCHHHhCCCCcCCCCCCCCCCC
Confidence            99999999532      12245667899999999999999998763   1357899999976422            223


Q ss_pred             CCchhhhhHHHHHHHHHHHHHHhc------CCCcEEEEEeCCcccCCcccCCCCC-hhHHHHHHhhcC------CCCCCC
Q 024145          159 GSPAYTISKYGILGLVKCLAAELG------QYGIRVNCVSPYGLATGMSMKGGVD-PALIESSMSQMG------NLKGEF  225 (272)
Q Consensus       159 ~~~~Y~~sK~a~~~~~~~la~e~~------~~gi~v~~i~Pg~v~t~~~~~~~~~-~~~~~~~~~~~~------~~~~~~  225 (272)
                      ....|+.||.+.+.+++.++.++.      +.|+++++++||.+.+|........ ............      .....+
T Consensus       153 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  232 (357)
T 1rkx_A          153 GYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPW  232 (357)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECC
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEECCCCCeecc
Confidence            456899999999999999999875      3489999999999999864311011 111222111111      011357


Q ss_pred             CChHhHHHHHHHHhcCC--CCCccccEEEecCc
Q 024145          226 LKTDGIANAALYLASDE--SSYVSGQNLVVDGG  256 (272)
Q Consensus       226 ~~~~dva~~~~~l~s~~--~~~~~G~~i~~dgG  256 (272)
                      ..++|++++++.++...  .....|+.|++.+|
T Consensus       233 v~v~Dva~a~~~~~~~~~~~~~~~~~~~ni~~~  265 (357)
T 1rkx_A          233 QHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPN  265 (357)
T ss_dssp             EETHHHHHHHHHHHHHHHHTCGGGCSEEECCCC
T ss_pred             EeHHHHHHHHHHHHHhhhhcCCCCCceEEECCC
Confidence            88999999999887531  11235788999864

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.94  E-value=8.8e-26  Score=197.29  Aligned_cols=227  Identities=19%  Similarity=0.104  Sum_probs=163.2

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHH-HHHHHhC--CceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGE-DLADKLG--QDVCYIHCDISNEDEVINLVDTAVSKFGK   89 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~-~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (272)
                      |++|++|||||+|+||++++++|+++|++|++++|+....+ ...+.+.  .++.++.+|++|.++++++++.+     +
T Consensus         1 m~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~   75 (345)
T 2z1m_A            1 MSGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKV-----Q   75 (345)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHH-----C
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhc-----C
Confidence            36789999999999999999999999999999999876432 2223332  36889999999999999888765     6


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccccc-----------ccCC
Q 024145           90 LDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTE-----------IAGL  158 (272)
Q Consensus        90 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~-----------~~~~  158 (272)
                      +|+|||+||....      +.+.+++++.+++|+.++..+++++.+. .  ..++||++||....           .+..
T Consensus        76 ~d~vih~A~~~~~------~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~--~~~~iv~~SS~~vyg~~~~~~~~e~~~~~  146 (345)
T 2z1m_A           76 PDEVYNLAAQSFV------GVSFEQPILTAEVDAIGVLRILEALRTV-K--PDTKFYQASTSEMFGKVQEIPQTEKTPFY  146 (345)
T ss_dssp             CSEEEECCCCCCH------HHHTTSHHHHHHHHTHHHHHHHHHHHHH-C--TTCEEEEEEEGGGGCSCSSSSBCTTSCCC
T ss_pred             CCEEEECCCCcch------hhhhhCHHHHHHHHHHHHHHHHHHHHHh-C--CCceEEEEechhhcCCCCCCCCCccCCCC
Confidence            8999999996432      1223567889999999999999998853 1  14789999998543           2334


Q ss_pred             CCchhhhhHHHHHHHHHHHHHHhc---CCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhc--------CCCCCCCCC
Q 024145          159 GSPAYTISKYGILGLVKCLAAELG---QYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQM--------GNLKGEFLK  227 (272)
Q Consensus       159 ~~~~Y~~sK~a~~~~~~~la~e~~---~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~  227 (272)
                      ....|+.||++.+.+++.++.+++   ..++.++.+.||...|.+...   ............        ......+.+
T Consensus       147 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (345)
T 2z1m_A          147 PRSPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRK---ITYSLARIKYGLQDKLVLGNLNAKRDWGY  223 (345)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHH---HHHHHHHHHTTSCSCEEESCTTCEECCEE
T ss_pred             CCChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHH---HHHHHHHHHcCCCCeeeeCCCCceeeeEE
Confidence            556899999999999999999875   234566677787766654220   011111111110        111134789


Q ss_pred             hHhHHHHHHHHhcCCCCCccccEEEecCceeec
Q 024145          228 TDGIANAALYLASDESSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       228 ~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~  260 (272)
                      ++|+|++++++++...    ++.+++.+|..+.
T Consensus       224 v~Dva~a~~~~~~~~~----~~~~~i~~~~~~s  252 (345)
T 2z1m_A          224 APEYVEAMWLMMQQPE----PDDYVIATGETHT  252 (345)
T ss_dssp             HHHHHHHHHHHHTSSS----CCCEEECCSCCEE
T ss_pred             HHHHHHHHHHHHhCCC----CceEEEeCCCCcc
Confidence            9999999999997643    3678887776543

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.94  E-value=2.2e-25  Score=194.81  Aligned_cols=214  Identities=12%  Similarity=0.048  Sum_probs=158.2

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEe
Q 024145           16 KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYN   95 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~   95 (272)
                      .++|||||+|+||++++++|+++|++|++++|+....+.+.   ..++.++.+|++|+++++++++       ++|+|||
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~---~~~~~~~~~Dl~d~~~~~~~~~-------~~d~vih   83 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLA---YLEPECRVAEMLDHAGLERALR-------GLDGVIF   83 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGG---GGCCEEEECCTTCHHHHHHHTT-------TCSEEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhc---cCCeEEEEecCCCHHHHHHHHc-------CCCEEEE
Confidence            48999999999999999999999999999999876543321   1267899999999998877665       6999999


Q ss_pred             CCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCC----------------
Q 024145           96 NAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLG----------------  159 (272)
Q Consensus        96 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~----------------  159 (272)
                      +||...        ...+++.+.+++|+.++..+++++.+.    +.++||++||.......+.                
T Consensus        84 ~a~~~~--------~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~v~~SS~~~~~~~~~~~~~~E~~~~~p~~~~  151 (342)
T 2x4g_A           84 SAGYYP--------SRPRRWQEEVASALGQTNPFYAACLQA----RVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSG  151 (342)
T ss_dssp             C--------------------CHHHHHHHHHHHHHHHHHHH----TCSCEEEECCGGGSCCCTTSSCBCTTCCCSSCCTT
T ss_pred             CCccCc--------CCCCCHHHHHHHHHHHHHHHHHHHHHc----CCCeEEEECCHHhhCcCCCCCCCCCCCCCCccccc
Confidence            999642        134567889999999999999998874    3467999999876544333                


Q ss_pred             CchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcc-cCCCCChhHHHHHHhhcCC----CCCCCCChHhHHHH
Q 024145          160 SPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMS-MKGGVDPALIESSMSQMGN----LKGEFLKTDGIANA  234 (272)
Q Consensus       160 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~-~~~~~~~~~~~~~~~~~~~----~~~~~~~~~dva~~  234 (272)
                      ...|+.+|.+.+.+++.++.   + |+++++++||.+.++.. ...  ..............    ....+.+++|+|++
T Consensus       152 ~~~Y~~sK~~~e~~~~~~~~---~-g~~~~ilrp~~v~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~  225 (342)
T 2x4g_A          152 KSSYVLCKWALDEQAREQAR---N-GLPVVIGIPGMVLGELDIGPT--TGRVITAIGNGEMTHYVAGQRNVIDAAEAGRG  225 (342)
T ss_dssp             SCHHHHHHHHHHHHHHHHHH---T-TCCEEEEEECEEECSCCSSCS--TTHHHHHHHTTCCCEEECCEEEEEEHHHHHHH
T ss_pred             cChHHHHHHHHHHHHHHHhh---c-CCcEEEEeCCceECCCCcccc--HHHHHHHHHcCCCccccCCCcceeeHHHHHHH
Confidence            66899999999999999886   3 89999999999999876 311  22222222222111    11246789999999


Q ss_pred             HHHHhcCCCCCccccEEEecCceeecc
Q 024145          235 ALYLASDESSYVSGQNLVVDGGFSVVN  261 (272)
Q Consensus       235 ~~~l~s~~~~~~~G~~i~~dgG~~~~~  261 (272)
                      +++++....   .|+.|++++|. +..
T Consensus       226 ~~~~~~~~~---~g~~~~v~~~~-~s~  248 (342)
T 2x4g_A          226 LLMALERGR---IGERYLLTGHN-LEM  248 (342)
T ss_dssp             HHHHHHHSC---TTCEEEECCEE-EEH
T ss_pred             HHHHHhCCC---CCceEEEcCCc-ccH
Confidence            999987654   28999999998 643

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.93  E-value=5.3e-26  Score=190.13  Aligned_cols=217  Identities=11%  Similarity=-0.009  Sum_probs=158.2

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHc--CCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHEN--GAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      +++|++|||||+|+||++++++|+++  |++|++++|++...++    ++.++.++.+|++|.++++++++       .+
T Consensus         2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~----~~~~~~~~~~D~~d~~~~~~~~~-------~~   70 (253)
T 1xq6_A            2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEK----IGGEADVFIGDITDADSINPAFQ-------GI   70 (253)
T ss_dssp             CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHH----TTCCTTEEECCTTSHHHHHHHHT-------TC
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhh----cCCCeeEEEecCCCHHHHHHHHc-------CC
Confidence            46789999999999999999999999  8999999998755432    35578899999999999888765       68


Q ss_pred             cEEEeCCCCCCCCCC-------CCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCch-
Q 024145           91 DIMYNNAGILDRSFG-------SILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPA-  162 (272)
Q Consensus        91 d~lv~~ag~~~~~~~-------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~-  162 (272)
                      |+|||++|.......       ...+...+++.+.+++|+.++..+++++.+.    +.++||++||..+..+...... 
T Consensus        71 d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~iv~~SS~~~~~~~~~~~~~  146 (253)
T 1xq6_A           71 DALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA----GVKHIVVVGSMGGTNPDHPLNKL  146 (253)
T ss_dssp             SEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH----TCSEEEEEEETTTTCTTCGGGGG
T ss_pred             CEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHc----CCCEEEEEcCccCCCCCCccccc
Confidence            999999997542100       0122223445578899999999999887653    3468999999887554333333 


Q ss_pred             ----hhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHH
Q 024145          163 ----YTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYL  238 (272)
Q Consensus       163 ----Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  238 (272)
                          |..+|.+++.+++.       .|+++++++||++.++................   .. ..++.+++|+|++++++
T Consensus       147 ~~~~y~~sK~~~e~~~~~-------~~i~~~~vrpg~v~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~Dva~~~~~~  215 (253)
T 1xq6_A          147 GNGNILVWKRKAEQYLAD-------SGTPYTIIRAGGLLDKEGGVRELLVGKDDELL---QT-DTKTVPRADVAEVCIQA  215 (253)
T ss_dssp             GGCCHHHHHHHHHHHHHT-------SSSCEEEEEECEEECSCSSSSCEEEESTTGGG---GS-SCCEEEHHHHHHHHHHH
T ss_pred             cchhHHHHHHHHHHHHHh-------CCCceEEEecceeecCCcchhhhhccCCcCCc---CC-CCcEEcHHHHHHHHHHH
Confidence                55699999987753       68999999999999986432100000000111   11 14678999999999999


Q ss_pred             hcCCCCCccccEEEecCce
Q 024145          239 ASDESSYVSGQNLVVDGGF  257 (272)
Q Consensus       239 ~s~~~~~~~G~~i~~dgG~  257 (272)
                      +....  ..|+.|++++|.
T Consensus       216 ~~~~~--~~g~~~~i~~~~  232 (253)
T 1xq6_A          216 LLFEE--AKNKAFDLGSKP  232 (253)
T ss_dssp             TTCGG--GTTEEEEEEECC
T ss_pred             HcCcc--ccCCEEEecCCC
Confidence            87543  478999999864

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.93  E-value=2.9e-25  Score=194.50  Aligned_cols=222  Identities=18%  Similarity=0.159  Sum_probs=165.4

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHc--CCeEEEeecCcch-HHHHHHHh-CCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Q 024145           16 KVAIITGGASGIGAMAVELFHEN--GAKVVIADVQDKL-GEDLADKL-GQDVCYIHCDISNEDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~--G~~V~~~~r~~~~-~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   91 (272)
                      |++|||||+|+||++++++|+++  |++|++++|+... ..+..+.+ +.++.++.+|++|+++++++++       .+|
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d   77 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAA-------KAD   77 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHT-------TCS
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCCHHHHHHHhh-------cCC
Confidence            68999999999999999999999  8999999986521 11111222 3578999999999999887765       569


Q ss_pred             EEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccc----------------
Q 024145           92 IMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEI----------------  155 (272)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~----------------  155 (272)
                      +|||+||....      +.+.+++++.+++|+.++..+++++.+.    + ++||++||.....                
T Consensus        78 ~vih~A~~~~~------~~~~~~~~~~~~~Nv~g~~~l~~a~~~~----~-~~~v~~SS~~vyg~~~~~~~~~~~~~~~~  146 (348)
T 1oc2_A           78 AIVHYAAESHN------DNSLNDPSPFIHTNFIGTYTLLEAARKY----D-IRFHHVSTDEVYGDLPLREDLPGHGEGPG  146 (348)
T ss_dssp             EEEECCSCCCH------HHHHHCCHHHHHHHTHHHHHHHHHHHHH----T-CEEEEEEEGGGGCCBCCGGGSTTTTCSTT
T ss_pred             EEEECCcccCc------cchhhCHHHHHHHHHHHHHHHHHHHHHh----C-CeEEEecccceeCCCcccccccccccccC
Confidence            99999996432      1234567789999999999999999875    2 3899999975331                


Q ss_pred             -------cCCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcC-------CC
Q 024145          156 -------AGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMG-------NL  221 (272)
Q Consensus       156 -------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~-------~~  221 (272)
                             +......|+.||.+.+.+++.++.++   |+++++++|+.+.+|........+...........       ..
T Consensus       147 ~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (348)
T 1oc2_A          147 EKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---GVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKN  223 (348)
T ss_dssp             SSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCC
T ss_pred             CCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEeeceeeCCCCCccchHHHHHHHHHcCCCceEecCCCc
Confidence                   22345689999999999999999885   79999999999999876421111122222222211       11


Q ss_pred             CCCCCChHhHHHHHHHHhcCCCCCccccEEEecCceeecc
Q 024145          222 KGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVVN  261 (272)
Q Consensus       222 ~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~  261 (272)
                      ...+.+++|+|++++++++..   .+|+.|++++|..+..
T Consensus       224 ~~~~i~v~Dva~~~~~~~~~~---~~g~~~~i~~~~~~s~  260 (348)
T 1oc2_A          224 VRDWIHTNDHSTGVWAILTKG---RMGETYLIGADGEKNN  260 (348)
T ss_dssp             EEECEEHHHHHHHHHHHHHHC---CTTCEEEECCSCEEEH
T ss_pred             eEeeEEHHHHHHHHHHHhhCC---CCCCeEEeCCCCCCCH
Confidence            246788999999999988654   3799999999976543

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.93  E-value=5.1e-25  Score=192.91  Aligned_cols=231  Identities=12%  Similarity=0.083  Sum_probs=163.3

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcC--CeEEEeecCcch-HHHHHHHh--CCceEEEEecCCCHHHHHHHHHHHH
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENG--AKVVIADVQDKL-GEDLADKL--GQDVCYIHCDISNEDEVINLVDTAV   84 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G--~~V~~~~r~~~~-~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   84 (272)
                      ++.++++++|||||+|+||++++++|+++|  ++|+..+|.... .....+.+  ..++.++.+|++|+++++++++.. 
T Consensus        19 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-   97 (346)
T 4egb_A           19 YFQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKER-   97 (346)
T ss_dssp             -----CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHH-
T ss_pred             ccccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhc-
Confidence            556788999999999999999999999999  677777765421 11111112  247999999999999999888753 


Q ss_pred             HHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccC-------
Q 024145           85 SKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAG-------  157 (272)
Q Consensus        85 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~-------  157 (272)
                          ++|+|||+||....      ..+.+++...+++|+.++..+++++...    +.+++|++||.......       
T Consensus        98 ----~~d~Vih~A~~~~~------~~~~~~~~~~~~~nv~~~~~ll~a~~~~----~~~~~v~~SS~~vy~~~~~~~~~~  163 (346)
T 4egb_A           98 ----DVQVIVNFAAESHV------DRSIENPIPFYDTNVIGTVTLLELVKKY----PHIKLVQVSTDEVYGSLGKTGRFT  163 (346)
T ss_dssp             ----TCCEEEECCCCC---------------CHHHHHHTHHHHHHHHHHHHS----TTSEEEEEEEGGGGCCCCSSCCBC
T ss_pred             ----CCCEEEECCcccch------hhhhhCHHHHHHHHHHHHHHHHHHHHhc----CCCEEEEeCchHHhCCCCcCCCcC
Confidence                69999999997543      1245667889999999999999988763    45689999997654332       


Q ss_pred             -----CCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCC-------CCCCC
Q 024145          158 -----LGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGN-------LKGEF  225 (272)
Q Consensus       158 -----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~-------~~~~~  225 (272)
                           .....|+.+|.+.+.+++.++.++   |+++++++|+.+.+|........+............       ....+
T Consensus       164 E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (346)
T 4egb_A          164 EETPLAPNSPYSSSKASADMIALAYYKTY---QLPVIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDW  240 (346)
T ss_dssp             TTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCCEEETTSCCEECE
T ss_pred             CCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeecceeCcCCCccchHHHHHHHHHcCCCceeeCCCCeEEee
Confidence                 123689999999999999999884   799999999999998754211111222222222110       11345


Q ss_pred             CChHhHHHHHHHHhcCCCCCccccEEEecCceeecc
Q 024145          226 LKTDGIANAALYLASDESSYVSGQNLVVDGGFSVVN  261 (272)
Q Consensus       226 ~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~  261 (272)
                      ..++|+|+++++++....   .|+.|++.+|..+..
T Consensus       241 i~v~Dva~a~~~~~~~~~---~g~~~~i~~~~~~s~  273 (346)
T 4egb_A          241 LHVTDHCSAIDVVLHKGR---VGEVYNIGGNNEKTN  273 (346)
T ss_dssp             EEHHHHHHHHHHHHHHCC---TTCEEEECCSCCEEH
T ss_pred             EEHHHHHHHHHHHHhcCC---CCCEEEECCCCceeH
Confidence            679999999999987654   799999999986543

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.93  E-value=4.9e-25  Score=192.34  Aligned_cols=223  Identities=16%  Similarity=0.129  Sum_probs=158.2

Q ss_pred             ccCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145            8 APFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus         8 ~~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      .+...++++++|||||+|+||++++++|+++|++|++++|+.....+..+.+ .++.++.+|++|+++++++++..    
T Consensus        14 ~~~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~-~~~~~~~~Dl~d~~~~~~~~~~~----   88 (333)
T 2q1w_A           14 LVPRGSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDH-PNLTFVEGSIADHALVNQLIGDL----   88 (333)
T ss_dssp             -------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCC-TTEEEEECCTTCHHHHHHHHHHH----
T ss_pred             eeeecCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhc-CCceEEEEeCCCHHHHHHHHhcc----
Confidence            4466678899999999999999999999999999999998754322111111 46889999999999998887642    


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccc----cC------
Q 024145           88 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEI----AG------  157 (272)
Q Consensus        88 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~----~~------  157 (272)
                       ++|+|||+||....  .     +.++++  +++|+.++..+++++.+    .+.++||++||.....    ..      
T Consensus        89 -~~D~vih~A~~~~~--~-----~~~~~~--~~~N~~~~~~l~~a~~~----~~~~~iV~~SS~~~~g~~~~~~~~~~~E  154 (333)
T 2q1w_A           89 -QPDAVVHTAASYKD--P-----DDWYND--TLTNCVGGSNVVQAAKK----NNVGRFVYFQTALCYGVKPIQQPVRLDH  154 (333)
T ss_dssp             -CCSEEEECCCCCSC--T-----TCHHHH--HHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGGCSCCCSSSBCTTS
T ss_pred             -CCcEEEECceecCC--C-----ccCChH--HHHHHHHHHHHHHHHHH----hCCCEEEEECcHHHhCCCcccCCCCcCC
Confidence             69999999997543  1     334544  99999999999999877    3457899999976543    21      


Q ss_pred             --CCC-chhhhhHHHHHHHHHH-HHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhc----CCCCCCCCChH
Q 024145          158 --LGS-PAYTISKYGILGLVKC-LAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQM----GNLKGEFLKTD  229 (272)
Q Consensus       158 --~~~-~~Y~~sK~a~~~~~~~-la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~  229 (272)
                        ... ..|+.+|++++.+++. ++        .+..++|+.+.+|... ....+..........    ......+..++
T Consensus       155 ~~~p~~~~Y~~sK~~~E~~~~~s~~--------~~~ilR~~~v~gp~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  225 (333)
T 2q1w_A          155 PRNPANSSYAISKSANEDYLEYSGL--------DFVTFRLANVVGPRNV-SGPLPIFFQRLSEGKKCFVTKARRDFVFVK  225 (333)
T ss_dssp             CCCCTTCHHHHHHHHHHHHHHHHTC--------CEEEEEESEEESTTCC-SSHHHHHHHHHHTTCCCEEEECEECEEEHH
T ss_pred             CCCCCCCchHHHHHHHHHHHHhhhC--------CeEEEeeceEECcCCc-CcHHHHHHHHHHcCCeeeCCCceEeeEEHH
Confidence              223 7899999999999887 64        5678899888877621 001111222222211    01125678899


Q ss_pred             hHHHHHHHHhcCCCCCccccEEEecCceeeccC
Q 024145          230 GIANAALYLASDESSYVSGQNLVVDGGFSVVNP  262 (272)
Q Consensus       230 dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~  262 (272)
                      |+|++++++++...    |+.|++++|..+..-
T Consensus       226 Dva~ai~~~~~~~~----g~~~~v~~~~~~s~~  254 (333)
T 2q1w_A          226 DLARATVRAVDGVG----HGAYHFSSGTDVAIK  254 (333)
T ss_dssp             HHHHHHHHHHTTCC----CEEEECSCSCCEEHH
T ss_pred             HHHHHHHHHHhcCC----CCEEEeCCCCCccHH
Confidence            99999999997653    899999998766433

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.93  E-value=4.2e-25  Score=190.76  Aligned_cols=219  Identities=14%  Similarity=0.130  Sum_probs=162.0

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEeC
Q 024145           17 VAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNN   96 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~   96 (272)
                      ++|||||+|+||++++++|+++|++|++++|......   +.+..++.++.+|++|++++++++++.     ++|++||+
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~---~~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~vi~~   73 (311)
T 2p5y_A            2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKR---ENVPKGVPFFRVDLRDKEGVERAFREF-----RPTHVSHQ   73 (311)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCG---GGSCTTCCEECCCTTCHHHHHHHHHHH-----CCSEEEEC
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCch---hhcccCeEEEECCCCCHHHHHHHHHhc-----CCCEEEEC
Confidence            6999999999999999999999999999988543211   122245778999999999998877642     68999999


Q ss_pred             CCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccC-------------CCCchh
Q 024145           97 AGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAG-------------LGSPAY  163 (272)
Q Consensus        97 ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~-------------~~~~~Y  163 (272)
                      |+....      ..+.+++.+.+++|+.+++.+++++..    .+.++||++||..+.++.             .....|
T Consensus        74 a~~~~~------~~~~~~~~~~~~~N~~g~~~l~~a~~~----~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~~~Y  143 (311)
T 2p5y_A           74 AAQASV------KVSVEDPVLDFEVNLLGGLNLLEACRQ----YGVEKLVFASTGGAIYGEVPEGERAEETWPPRPKSPY  143 (311)
T ss_dssp             CSCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHH----TTCSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCCSHH
T ss_pred             ccccCc------hhhhhCHHHHHHHHHHHHHHHHHHHHH----hCCCEEEEeCCChhhcCCCCCCCCcCCCCCCCCCChH
Confidence            986432      123566788999999999999998864    345689999998322211             235689


Q ss_pred             hhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCC---hhHHHHHHhhcC------------CCCCCCCCh
Q 024145          164 TISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVD---PALIESSMSQMG------------NLKGEFLKT  228 (272)
Q Consensus       164 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~---~~~~~~~~~~~~------------~~~~~~~~~  228 (272)
                      +.||++++.+++.++.++   |+++++++|+.+.+|........   +...........            .....+..+
T Consensus       144 ~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v  220 (311)
T 2p5y_A          144 AASKAAFEHYLSVYGQSY---GLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYV  220 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEH
T ss_pred             HHHHHHHHHHHHHHHHHc---CCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEH
Confidence            999999999999999884   79999999999999875421110   111122212110            112356789


Q ss_pred             HhHHHHHHHHhcCCCCCccccEEEecCceeecc
Q 024145          229 DGIANAALYLASDESSYVSGQNLVVDGGFSVVN  261 (272)
Q Consensus       229 ~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~  261 (272)
                      +|+|+++++++...     |+.|++++|..++.
T Consensus       221 ~Dva~a~~~~~~~~-----~~~~~i~~~~~~s~  248 (311)
T 2p5y_A          221 GDVAEAHALALFSL-----EGIYNVGTGEGHTT  248 (311)
T ss_dssp             HHHHHHHHHHHHHC-----CEEEEESCSCCEEH
T ss_pred             HHHHHHHHHHHhCC-----CCEEEeCCCCCccH
Confidence            99999999988653     78999999876543

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.93  E-value=1.3e-24  Score=190.61  Aligned_cols=230  Identities=16%  Similarity=0.098  Sum_probs=172.5

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhC--------CceEEEEecCCCHHHHHHHHHHH
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLG--------QDVCYIHCDISNEDEVINLVDTA   83 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~--------~~~~~~~~D~~~~~~~~~~~~~~   83 (272)
                      .+++|++|||||+|+||++++++|+++|++|++++|+........+.+.        .++.++.+|++|+++++++++  
T Consensus        22 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   99 (351)
T 3ruf_A           22 IFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK--   99 (351)
T ss_dssp             HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT--
T ss_pred             CCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhc--
Confidence            3578999999999999999999999999999999997654333333221        579999999999999887766  


Q ss_pred             HHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCC-----
Q 024145           84 VSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGL-----  158 (272)
Q Consensus        84 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~-----  158 (272)
                           ++|+|||+||....      ..+.+++...+++|+.++..+++++...    +-+++|++||.......+     
T Consensus       100 -----~~d~Vih~A~~~~~------~~~~~~~~~~~~~nv~~~~~ll~a~~~~----~~~~~v~~SS~~vyg~~~~~~~~  164 (351)
T 3ruf_A          100 -----GVDHVLHQAALGSV------PRSIVDPITTNATNITGFLNILHAAKNA----QVQSFTYAASSSTYGDHPALPKV  164 (351)
T ss_dssp             -----TCSEEEECCCCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHHT----TCSEEEEEEEGGGGTTCCCSSBC
T ss_pred             -----CCCEEEECCccCCc------chhhhCHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEEecHHhcCCCCCCCCc
Confidence                 79999999996432      1234567789999999999999988663    345899999986543322     


Q ss_pred             ------CCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCC----hhHHHHHHhhcCC-------C
Q 024145          159 ------GSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVD----PALIESSMSQMGN-------L  221 (272)
Q Consensus       159 ------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~----~~~~~~~~~~~~~-------~  221 (272)
                            ....|+.+|.+.+.+++.++.++   |+++++++|+.+.+|........    +............       .
T Consensus       165 E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~  241 (351)
T 3ruf_A          165 EENIGNPLSPYAVTKYVNEIYAQVYARTY---GFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGET  241 (351)
T ss_dssp             TTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCC
T ss_pred             cCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCe
Confidence                  24689999999999999999885   79999999999999875432111    1222222222111       1


Q ss_pred             CCCCCChHhHHHHHHHHhcCCCCCccccEEEecCceeeccC
Q 024145          222 KGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVVNP  262 (272)
Q Consensus       222 ~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~  262 (272)
                      ...+..++|+|++++.++... ....|+.|++.+|..+...
T Consensus       242 ~~~~i~v~Dva~a~~~~~~~~-~~~~~~~~ni~~~~~~s~~  281 (351)
T 3ruf_A          242 SRDFCYIDNVIQMNILSALAK-DSAKDNIYNVAVGDRTTLN  281 (351)
T ss_dssp             EECCEEHHHHHHHHHHHHTCC-GGGCSEEEEESCSCCEEHH
T ss_pred             EEeeEEHHHHHHHHHHHHhhc-cccCCCEEEeCCCCcccHH
Confidence            135778999999999888652 2457999999998766433

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.93  E-value=7.7e-25  Score=191.84  Aligned_cols=223  Identities=12%  Similarity=0.062  Sum_probs=160.3

Q ss_pred             CccCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHH
Q 024145            7 AAPFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus         7 ~~~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (272)
                      +.++.++++|++|||||+|+||++++++|+++|++|++++|+...         .++.++.+|++|.++++++++     
T Consensus        11 ~~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~---------~~~~~~~~Dl~d~~~~~~~~~-----   76 (347)
T 4id9_A           11 SSGLVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG---------TGGEEVVGSLEDGQALSDAIM-----   76 (347)
T ss_dssp             ----------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS---------SCCSEEESCTTCHHHHHHHHT-----
T ss_pred             CCcccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC---------CCccEEecCcCCHHHHHHHHh-----
Confidence            345677899999999999999999999999999999999998754         467889999999999887766     


Q ss_pred             hCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccc-----------
Q 024145           87 FGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEI-----------  155 (272)
Q Consensus        87 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~-----------  155 (272)
                        ++|+|||+|+....        +.+.++..+++|+.++..+++++..    .+.++||++||.....           
T Consensus        77 --~~d~vih~A~~~~~--------~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~V~~SS~~vyg~~~~~~~~~~E  142 (347)
T 4id9_A           77 --GVSAVLHLGAFMSW--------APADRDRMFAVNVEGTRRLLDAASA----AGVRRFVFASSGEVYPENRPEFLPVTE  142 (347)
T ss_dssp             --TCSEEEECCCCCCS--------SGGGHHHHHHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGTTTTSCSSSSBCT
T ss_pred             --CCCEEEECCcccCc--------chhhHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEECCHHHhCCCCCCCCCcCC
Confidence              79999999996543        2344589999999999999998865    3456899999965432           


Q ss_pred             --cCCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCccc-------------CCcccCCCC-------ChhHHHH
Q 024145          156 --AGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLA-------------TGMSMKGGV-------DPALIES  213 (272)
Q Consensus       156 --~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~-------------t~~~~~~~~-------~~~~~~~  213 (272)
                        +......|+.+|.+.+.+++.++.+   .|+++++++|+.+.             +|.......       .......
T Consensus       143 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~  219 (347)
T 4id9_A          143 DHPLCPNSPYGLTKLLGEELVRFHQRS---GAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAE  219 (347)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHH---SSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHH
T ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHh---cCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHH
Confidence              2234568999999999999999988   48999999999998             333110000       0011111


Q ss_pred             HHhhc---CC--------CCCCC----CChHhHHHHHHHHhcCCCCCccccEEEecCceeeccC
Q 024145          214 SMSQM---GN--------LKGEF----LKTDGIANAALYLASDESSYVSGQNLVVDGGFSVVNP  262 (272)
Q Consensus       214 ~~~~~---~~--------~~~~~----~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~  262 (272)
                      .+...   .+        ....+    ..++|+|++++.++....  ..|+.|++.+|..+...
T Consensus       220 ~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~--~~~~~~ni~~~~~~s~~  281 (347)
T 4id9_A          220 LLQSRDIGEPSHILARNENGRPFRMHITDTRDMVAGILLALDHPE--AAGGTFNLGADEPADFA  281 (347)
T ss_dssp             HHHHHCCSSCCEEEEECTTCCBCEECEEEHHHHHHHHHHHHHCGG--GTTEEEEESCSSCEEHH
T ss_pred             HHHHHHcCCCeEEeCCCCcccCCccCcEeHHHHHHHHHHHhcCcc--cCCCeEEECCCCcccHH
Confidence            11111   00        11345    788999999999997643  35899999998766433

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.93  E-value=1.7e-25  Score=183.86  Aligned_cols=192  Identities=12%  Similarity=0.119  Sum_probs=154.7

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCC-HHHHHHHHHHHHHHhCCccEEEe
Q 024145           17 VAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISN-EDEVINLVDTAVSKFGKLDIMYN   95 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~id~lv~   95 (272)
                      ++|||||+|+||++++++|+++|++|++++|+++..+..     .++.++.+|++| +++++++++       ++|+|||
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-----~~~~~~~~D~~d~~~~~~~~~~-------~~d~vi~   69 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY-----NNVKAVHFDVDWTPEEMAKQLH-------GMDAIIN   69 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC-----TTEEEEECCTTSCHHHHHTTTT-------TCSEEEE
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc-----CCceEEEecccCCHHHHHHHHc-------CCCEEEE
Confidence            699999999999999999999999999999987654322     578999999999 988877665       6999999


Q ss_pred             CCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCC-------CchhhhhHH
Q 024145           96 NAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLG-------SPAYTISKY  168 (272)
Q Consensus        96 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~-------~~~Y~~sK~  168 (272)
                      ++|....              +.+++|+.++..+++++..    .+.++||++||..+..+.+.       ...|+.+|.
T Consensus        70 ~ag~~~~--------------~~~~~n~~~~~~l~~a~~~----~~~~~iv~~SS~~~~~~~~~~e~~~~~~~~Y~~sK~  131 (219)
T 3dqp_A           70 VSGSGGK--------------SLLKVDLYGAVKLMQAAEK----AEVKRFILLSTIFSLQPEKWIGAGFDALKDYYIAKH  131 (219)
T ss_dssp             CCCCTTS--------------SCCCCCCHHHHHHHHHHHH----TTCCEEEEECCTTTTCGGGCCSHHHHHTHHHHHHHH
T ss_pred             CCcCCCC--------------CcEeEeHHHHHHHHHHHHH----hCCCEEEEECcccccCCCcccccccccccHHHHHHH
Confidence            9997542              1678899999999888754    34578999999887766555       678999999


Q ss_pred             HHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccc
Q 024145          169 GILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSG  248 (272)
Q Consensus       169 a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  248 (272)
                      +.+.+++      ...|+++++++||++.++......   .        .......+.+++|+|+++++++.++.  ..|
T Consensus       132 ~~e~~~~------~~~~i~~~ilrp~~v~g~~~~~~~---~--------~~~~~~~~i~~~Dva~~i~~~l~~~~--~~g  192 (219)
T 3dqp_A          132 FADLYLT------KETNLDYTIIQPGALTEEEATGLI---D--------INDEVSASNTIGDVADTIKELVMTDH--SIG  192 (219)
T ss_dssp             HHHHHHH------HSCCCEEEEEEECSEECSCCCSEE---E--------ESSSCCCCEEHHHHHHHHHHHHTCGG--GTT
T ss_pred             HHHHHHH------hccCCcEEEEeCceEecCCCCCcc---c--------cCCCcCCcccHHHHHHHHHHHHhCcc--ccC
Confidence            9999887      357999999999999987543210   0        11223678899999999999997643  459


Q ss_pred             cEEEecCce
Q 024145          249 QNLVVDGGF  257 (272)
Q Consensus       249 ~~i~~dgG~  257 (272)
                      +.|++++|.
T Consensus       193 ~~~~i~~g~  201 (219)
T 3dqp_A          193 KVISMHNGK  201 (219)
T ss_dssp             EEEEEEECS
T ss_pred             cEEEeCCCC
Confidence            999997774

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.93  E-value=2.1e-24  Score=175.07  Aligned_cols=198  Identities=11%  Similarity=0.032  Sum_probs=149.0

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEE
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMY   94 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv   94 (272)
                      +|+++||||+|+||++++++|+++|++|++++|+++..+..   ...++.++.+|++|+++++++++       .+|++|
T Consensus         3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~-------~~d~vi   72 (206)
T 1hdo_A            3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE---GPRPAHVVVGDVLQAADVDKTVA-------GQDAVI   72 (206)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS---SCCCSEEEESCTTSHHHHHHHHT-------TCSEEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc---cCCceEEEEecCCCHHHHHHHHc-------CCCEEE
Confidence            47999999999999999999999999999999987653211   14578899999999999887665       689999


Q ss_pred             eCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCC----CCchhhhhHHHH
Q 024145           95 NNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGL----GSPAYTISKYGI  170 (272)
Q Consensus        95 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~----~~~~Y~~sK~a~  170 (272)
                      |++|....  .   +.        .++|+.++..+++++.+.    +.+++|++||.......+    ....|+.+|.++
T Consensus        73 ~~a~~~~~--~---~~--------~~~n~~~~~~~~~~~~~~----~~~~~v~~Ss~~~~~~~~~~~~~~~~y~~~K~~~  135 (206)
T 1hdo_A           73 VLLGTRND--L---SP--------TTVMSEGARNIVAAMKAH----GVDKVVACTSAFLLWDPTKVPPRLQAVTDDHIRM  135 (206)
T ss_dssp             ECCCCTTC--C---SC--------CCHHHHHHHHHHHHHHHH----TCCEEEEECCGGGTSCTTCSCGGGHHHHHHHHHH
T ss_pred             ECccCCCC--C---Cc--------cchHHHHHHHHHHHHHHh----CCCeEEEEeeeeeccCcccccccchhHHHHHHHH
Confidence            99996532  1   11        137888888888877653    456899999987654433    456899999999


Q ss_pred             HHHHHHHHHHhcCCCcEEEEEeCCcc-cCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCcccc
Q 024145          171 LGLVKCLAAELGQYGIRVNCVSPYGL-ATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQ  249 (272)
Q Consensus       171 ~~~~~~la~e~~~~gi~v~~i~Pg~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  249 (272)
                      +.+++.       .|++++.++||++ .++....   ...    .... .+. +.+.+++|+|+++++++.++.  .+|+
T Consensus       136 e~~~~~-------~~i~~~~lrp~~~~~~~~~~~---~~~----~~~~-~~~-~~~i~~~Dva~~~~~~~~~~~--~~g~  197 (206)
T 1hdo_A          136 HKVLRE-------SGLKYVAVMPPHIGDQPLTGA---YTV----TLDG-RGP-SRVISKHDLGHFMLRCLTTDE--YDGH  197 (206)
T ss_dssp             HHHHHH-------TCSEEEEECCSEEECCCCCSC---CEE----ESSS-CSS-CSEEEHHHHHHHHHHTTSCST--TTTC
T ss_pred             HHHHHh-------CCCCEEEEeCCcccCCCCCcc---eEe----cccC-CCC-CCccCHHHHHHHHHHHhcCcc--cccc
Confidence            998742       5899999999998 3333211   000    0011 111 578899999999999997643  6899


Q ss_pred             EEEecCce
Q 024145          250 NLVVDGGF  257 (272)
Q Consensus       250 ~i~~dgG~  257 (272)
                      .|.++||.
T Consensus       198 ~~~i~~g~  205 (206)
T 1hdo_A          198 STYPSHQY  205 (206)
T ss_dssp             EEEEECCC
T ss_pred             ceeeeccc
Confidence            99999985

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.93  E-value=5.4e-24  Score=190.11  Aligned_cols=227  Identities=11%  Similarity=-0.015  Sum_probs=163.1

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchH--------------------HHHHHHhCCceEEEEecCCC
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLG--------------------EDLADKLGQDVCYIHCDISN   72 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~--------------------~~~~~~~~~~~~~~~~D~~~   72 (272)
                      .++.++|||||+|+||++++++|+++|++|++++|.....                    ....+..+.++.++.+|++|
T Consensus         9 ~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d   88 (404)
T 1i24_A            9 HHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICD   88 (404)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTS
T ss_pred             cCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCC
Confidence            5778999999999999999999999999999998864321                    11111225678999999999


Q ss_pred             HHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccc
Q 024145           73 EDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASAC  152 (272)
Q Consensus        73 ~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~  152 (272)
                      +++++++++..     ++|+|||+||.....   ....+++++...+++|+.++..+++++.+...   ..+||++||..
T Consensus        89 ~~~~~~~~~~~-----~~D~Vih~A~~~~~~---~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~---~~~~V~~SS~~  157 (404)
T 1i24_A           89 FEFLAESFKSF-----EPDSVVHFGEQRSAP---YSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGE---ECHLVKLGTMG  157 (404)
T ss_dssp             HHHHHHHHHHH-----CCSEEEECCSCCCHH---HHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCT---TCEEEEECCGG
T ss_pred             HHHHHHHHhcc-----CCCEEEECCCCCCcc---chhhCccchhhhHHHHHHHHHHHHHHHHHhCC---CcEEEEeCcHH
Confidence            99998887754     699999999975421   11225666788999999999999999876421   24899999975


Q ss_pred             ccc------------------------cCCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCC----
Q 024145          153 TEI------------------------AGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKG----  204 (272)
Q Consensus       153 ~~~------------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~----  204 (272)
                      ...                        +......|+.||.+.+.+++.++.++   |+++++++||.+.+|.....    
T Consensus       158 vyg~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ivrp~~v~Gp~~~~~~~~~  234 (404)
T 1i24_A          158 EYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVKTDETEMHE  234 (404)
T ss_dssp             GGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECSCCTTGGGSG
T ss_pred             HhCCCCCCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhc---CCeEEEEecceeeCCCCCcccccc
Confidence            432                        22345689999999999999999885   89999999999999865310    


Q ss_pred             -------------CCChhHHHHHHhhcCC-------CCCCCCChHhHHHHHHHHhcCCCCCccc--cEEEecC
Q 024145          205 -------------GVDPALIESSMSQMGN-------LKGEFLKTDGIANAALYLASDESSYVSG--QNLVVDG  255 (272)
Q Consensus       205 -------------~~~~~~~~~~~~~~~~-------~~~~~~~~~dva~~~~~l~s~~~~~~~G--~~i~~dg  255 (272)
                                   ................       ....+..++|+|++++.++.....  .|  +.|++.+
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~~--~g~~~~yni~~  305 (404)
T 1i24_A          235 ELRNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAK--AGEFRVFNQFT  305 (404)
T ss_dssp             GGCCCCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCC--TTCEEEEEECS
T ss_pred             ccccccccccchhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCccc--CCCceEEEECC
Confidence                         0011222222222110       113567899999999998865432  46  6888866

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.92  E-value=2.5e-24  Score=191.16  Aligned_cols=225  Identities=15%  Similarity=0.091  Sum_probs=166.5

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      .+.++|++|||||+|+||++++++|+++|++|++++|+.......   ...++.++.+|++|.++++++++       ++
T Consensus        25 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~v~~~~~Dl~d~~~~~~~~~-------~~   94 (379)
T 2c5a_A           25 WPSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE---DMFCDEFHLVDLRVMENCLKVTE-------GV   94 (379)
T ss_dssp             CTTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG---GGTCSEEEECCTTSHHHHHHHHT-------TC
T ss_pred             ccccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh---ccCCceEEECCCCCHHHHHHHhC-------CC
Confidence            334678999999999999999999999999999999986543211   12468899999999999887764       79


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccc---------------
Q 024145           91 DIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEI---------------  155 (272)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~---------------  155 (272)
                      |+|||+||....  .   ..+.+++.+.+++|+.++..+++++..    .+.++||++||.....               
T Consensus        95 d~Vih~A~~~~~--~---~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~  165 (379)
T 2c5a_A           95 DHVFNLAADMGG--M---GFIQSNHSVIMYNNTMISFNMIEAARI----NGIKRFFYASSACIYPEFKQLETTNVSLKES  165 (379)
T ss_dssp             SEEEECCCCCCC--H---HHHTTCHHHHHHHHHHHHHHHHHHHHH----TTCSEEEEEEEGGGSCGGGSSSSSSCEECGG
T ss_pred             CEEEECceecCc--c---cccccCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEeehheeCCCCCCCccCCCcCcc
Confidence            999999996432  0   011245778899999999999998865    3446899999976432               


Q ss_pred             ---cCCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCC----ChhHHHHHHhhcC--------C
Q 024145          156 ---AGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGV----DPALIESSMSQMG--------N  220 (272)
Q Consensus       156 ---~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~----~~~~~~~~~~~~~--------~  220 (272)
                         +......|+.+|.+.+.+++.++.++   |+++++++||++.+|.......    .............        .
T Consensus       166 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~  242 (379)
T 2c5a_A          166 DAWPAEPQDAFGLEKLATEELCKHYNKDF---GIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGL  242 (379)
T ss_dssp             GGSSBCCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSC
T ss_pred             cCCCCCCCChhHHHHHHHHHHHHHHHHHH---CCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCC
Confidence               22345689999999999999998874   7999999999999987542111    1112222222211        0


Q ss_pred             CCCCCCChHhHHHHHHHHhcCCCCCccccEEEecCceeecc
Q 024145          221 LKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVVN  261 (272)
Q Consensus       221 ~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~  261 (272)
                      ....+..++|+|+++++++...    .|+.+++.+|..+..
T Consensus       243 ~~~~~i~v~Dva~ai~~~l~~~----~~~~~ni~~~~~~s~  279 (379)
T 2c5a_A          243 QTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMVSM  279 (379)
T ss_dssp             CEECCEEHHHHHHHHHHHHHSS----CCSCEEECCCCCEEH
T ss_pred             eeEEEEEHHHHHHHHHHHhhcc----CCCeEEeCCCCccCH
Confidence            1245778999999999998754    477899998876543

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.92  E-value=1e-24  Score=192.41  Aligned_cols=223  Identities=18%  Similarity=0.148  Sum_probs=161.3

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHH--cCCeEEEeecCcchH----------HHHHHHhCCceEEEEecCCCHHHHHH
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHE--NGAKVVIADVQDKLG----------EDLADKLGQDVCYIHCDISNEDEVIN   78 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~--~G~~V~~~~r~~~~~----------~~~~~~~~~~~~~~~~D~~~~~~~~~   78 (272)
                      +++++|++|||||+|+||++++++|++  +|++|++++|+....          .......+.++.++.+|++|++++++
T Consensus         6 ~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~   85 (362)
T 3sxp_A            6 DELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRR   85 (362)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHH
T ss_pred             hhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHH
Confidence            467899999999999999999999999  999999999865411          11112224567999999999999877


Q ss_pred             HHHHHHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccC-
Q 024145           79 LVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAG-  157 (272)
Q Consensus        79 ~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~-  157 (272)
                      +      ...++|+|||+||....        +.++++..+++|+.++..+++++..     ..++||++||....... 
T Consensus        86 ~------~~~~~D~vih~A~~~~~--------~~~~~~~~~~~Nv~gt~~ll~aa~~-----~~~~~V~~SS~~vyg~~~  146 (362)
T 3sxp_A           86 L------EKLHFDYLFHQAAVSDT--------TMLNQELVMKTNYQAFLNLLEIARS-----KKAKVIYASSAGVYGNTK  146 (362)
T ss_dssp             H------TTSCCSEEEECCCCCGG--------GCCCHHHHHHHHTHHHHHHHHHHHH-----TTCEEEEEEEGGGGCSCC
T ss_pred             h------hccCCCEEEECCccCCc--------cccCHHHHHHHHHHHHHHHHHHHHH-----cCCcEEEeCcHHHhCCCC
Confidence            6      23489999999996432        3356788999999999999998854     23459999996543221 


Q ss_pred             ---------CCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCC----CChhHHHHHHhhcC-----
Q 024145          158 ---------LGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGG----VDPALIESSMSQMG-----  219 (272)
Q Consensus       158 ---------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~----~~~~~~~~~~~~~~-----  219 (272)
                               .....|+.||.+.+.+++.++.+     +.+..++|+.+.+|......    ..............     
T Consensus       147 ~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (362)
T 3sxp_A          147 APNVVGKNESPENVYGFSKLCMDEFVLSHSND-----NVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFE  221 (362)
T ss_dssp             SSBCTTSCCCCSSHHHHHHHHHHHHHHHTTTT-----SCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSG
T ss_pred             CCCCCCCCCCCCChhHHHHHHHHHHHHHHhcc-----CCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEEC
Confidence                     12346999999999999988766     77888999988887654210    01112222221111     


Q ss_pred             --CCCCCCCChHhHHHHHHHHhcCCCCCccccEEEecCceeecc
Q 024145          220 --NLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVVN  261 (272)
Q Consensus       220 --~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~  261 (272)
                        .....+..++|+|+++++++..+.   +| .|++++|..+..
T Consensus       222 ~g~~~~~~i~v~Dva~ai~~~~~~~~---~g-~~~i~~~~~~s~  261 (362)
T 3sxp_A          222 FGEQLRDFVYIEDVIQANVKAMKAQK---SG-VYNVGYSQARSY  261 (362)
T ss_dssp             GGCCEEECEEHHHHHHHHHHHTTCSS---CE-EEEESCSCEEEH
T ss_pred             CCCeEEccEEHHHHHHHHHHHHhcCC---CC-EEEeCCCCCccH
Confidence              011346789999999999997653   68 999999876653

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.92  E-value=4.6e-25  Score=183.51  Aligned_cols=198  Identities=15%  Similarity=0.073  Sum_probs=139.7

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcC-CeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENG-AKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   91 (272)
                      +..|++|||||+|+||++++++|+++| ++|++++|+++..+++   ...++.++.+|++|+++++++++       .+|
T Consensus        21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~-------~~D   90 (236)
T 3qvo_A           21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP---YPTNSQIIMGDVLNHAALKQAMQ-------GQD   90 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSS---CCTTEEEEECCTTCHHHHHHHHT-------TCS
T ss_pred             CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccc---ccCCcEEEEecCCCHHHHHHHhc-------CCC
Confidence            445899999999999999999999999 8999999987654322   23578999999999999888776       689


Q ss_pred             EEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCc---------h
Q 024145           92 IMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSP---------A  162 (272)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~---------~  162 (272)
                      +||||+|...          .              ...++.+++.+.+.+.++||++||.....+.+...         .
T Consensus        91 ~vv~~a~~~~----------~--------------~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~~~~~~~  146 (236)
T 3qvo_A           91 IVYANLTGED----------L--------------DIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWNNAVIGE  146 (236)
T ss_dssp             EEEEECCSTT----------H--------------HHHHHHHHHHHHHTTCCEEEEECCCCC----------------CG
T ss_pred             EEEEcCCCCc----------h--------------hHHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccchhhcccc
Confidence            9999998421          1              12245667777777778999999987765443321         1


Q ss_pred             hhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCC
Q 024145          163 YTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDE  242 (272)
Q Consensus       163 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  242 (272)
                      +...+...       ...+.+.||++++|+||++.++.....    .    ......+..+++.+++|+|++++++++++
T Consensus       147 ~~~~~~~~-------~~~l~~~gi~~~~vrPg~i~~~~~~~~----~----~~~~~~~~~~~~i~~~DvA~~i~~ll~~~  211 (236)
T 3qvo_A          147 PLKPFRRA-------ADAIEASGLEYTILRPAWLTDEDIIDY----E----LTSRNEPFKGTIVSRKSVAALITDIIDKP  211 (236)
T ss_dssp             GGHHHHHH-------HHHHHTSCSEEEEEEECEEECCSCCCC----E----EECTTSCCSCSEEEHHHHHHHHHHHHHST
T ss_pred             hHHHHHHH-------HHHHHHCCCCEEEEeCCcccCCCCcce----E----EeccCCCCCCcEECHHHHHHHHHHHHcCc
Confidence            12222222       123346799999999999998754311    0    00111222367889999999999999988


Q ss_pred             CCCccccEEEecCceeec
Q 024145          243 SSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       243 ~~~~~G~~i~~dgG~~~~  260 (272)
                      ..++ |+.+.++++.+..
T Consensus       212 ~~~~-g~~~~i~~~~~~~  228 (236)
T 3qvo_A          212 EKHI-GENIGINQPGTDG  228 (236)
T ss_dssp             TTTT-TEEEEEECSSCCC
T ss_pred             cccc-CeeEEecCCCCCC
Confidence            7666 8999999887654

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.92  E-value=6.8e-25  Score=189.35  Aligned_cols=220  Identities=17%  Similarity=0.086  Sum_probs=164.1

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEe
Q 024145           16 KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYN   95 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~   95 (272)
                      +++|||||+|+||++++++|+++|++|++++|+.....+.   ....+.++.+|++|.+ +.++++       . |+|||
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~~~~~~~Dl~d~~-~~~~~~-------~-d~vih   68 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREF---VNPSAELHVRDLKDYS-WGAGIK-------G-DVVFH   68 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGG---SCTTSEEECCCTTSTT-TTTTCC-------C-SEEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhh---cCCCceEEECccccHH-HHhhcC-------C-CEEEE
Confidence            4799999999999999999999999999999876643322   2457889999999987 654433       3 99999


Q ss_pred             CCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccc-----------cCCCCchhh
Q 024145           96 NAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEI-----------AGLGSPAYT  164 (272)
Q Consensus        96 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~-----------~~~~~~~Y~  164 (272)
                      +||....      ..+.+++...+++|+.++.++++++...    +.++||++||.....           +......|+
T Consensus        69 ~A~~~~~------~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~  138 (312)
T 3ko8_A           69 FAANPEV------RLSTTEPIVHFNENVVATFNVLEWARQT----GVRTVVFASSSTVYGDADVIPTPEEEPYKPISVYG  138 (312)
T ss_dssp             CCSSCSS------SGGGSCHHHHHHHHHHHHHHHHHHHHHH----TCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHH
T ss_pred             CCCCCCc------hhhhhCHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEeCcHHHhCCCCCCCCCCCCCCCCCChHH
Confidence            9995432      3345667889999999999999988653    456899999976542           223457899


Q ss_pred             hhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCC--------CCCCCCChHhHHHHHH
Q 024145          165 ISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGN--------LKGEFLKTDGIANAAL  236 (272)
Q Consensus       165 ~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~dva~~~~  236 (272)
                      .||.+.+.+++.++.++   |+++++++|+.+.+|..... ..............+        ....+..++|+|++++
T Consensus       139 ~sK~~~e~~~~~~~~~~---g~~~~~lrp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~  214 (312)
T 3ko8_A          139 AAKAAGEVMCATYARLF---GVRCLAVRYANVVGPRLRHG-VIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATL  214 (312)
T ss_dssp             HHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCSS-HHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHh---CCCEEEEeeccccCcCCCCC-hHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHH
Confidence            99999999999999986   89999999999999875421 111222222221111        1135778999999999


Q ss_pred             HHhcC-CCCCccccEEEecCceeecc
Q 024145          237 YLASD-ESSYVSGQNLVVDGGFSVVN  261 (272)
Q Consensus       237 ~l~s~-~~~~~~G~~i~~dgG~~~~~  261 (272)
                      +++.. ......|+.|++.+|..+..
T Consensus       215 ~~~~~~~~~~~~~~~~ni~~~~~~s~  240 (312)
T 3ko8_A          215 AAWKKFEEMDAPFLALNVGNVDAVRV  240 (312)
T ss_dssp             HHHHHHHHSCCSEEEEEESCSSCEEH
T ss_pred             HHHHhccccCCCCcEEEEcCCCceeH
Confidence            99865 11234789999999876643

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.92  E-value=1.7e-24  Score=187.04  Aligned_cols=218  Identities=14%  Similarity=0.160  Sum_probs=160.7

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEe
Q 024145           16 KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYN   95 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~   95 (272)
                      |++|||||+|+||++++++|+++|+.|++..|+....+    .....+.++.+|+++ +++.++++       ++|++||
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~----~~~~~~~~~~~Dl~~-~~~~~~~~-------~~d~vih   69 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEE----FVNEAARLVKADLAA-DDIKDYLK-------GAEEVWH   69 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGG----GSCTTEEEECCCTTT-SCCHHHHT-------TCSEEEE
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChh----hcCCCcEEEECcCCh-HHHHHHhc-------CCCEEEE
Confidence            47999999999999999999999955555555444322    224578999999999 88777665       7999999


Q ss_pred             CCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccc-----------cCCCCchhh
Q 024145           96 NAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEI-----------AGLGSPAYT  164 (272)
Q Consensus        96 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~-----------~~~~~~~Y~  164 (272)
                      +|+...      ...+.+++++.+++|+.++..+++++..    .+.++||++||.....           +......|+
T Consensus        70 ~a~~~~------~~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~  139 (313)
T 3ehe_A           70 IAANPD------VRIGAENPDEIYRNNVLATYRLLEAMRK----AGVSRIVFTSTSTVYGEAKVIPTPEDYPTHPISLYG  139 (313)
T ss_dssp             CCCCCC------CC-CCCCHHHHHHHHHHHHHHHHHHHHH----HTCCEEEEECCGGGGCSCSSSSBCTTSCCCCCSHHH
T ss_pred             CCCCCC------hhhhhhCHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEeCchHHhCcCCCCCCCCCCCCCCCCHHH
Confidence            998532      2334566788999999999999998655    3456899999976542           334456899


Q ss_pred             hhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCC--------CCCCCCChHhHHHHHH
Q 024145          165 ISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGN--------LKGEFLKTDGIANAAL  236 (272)
Q Consensus       165 ~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~dva~~~~  236 (272)
                      .+|.+.+.+++.++.++   |+++++++|+.+.+|..... ..............+        ....+..++|+|++++
T Consensus       140 ~sK~~~e~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~  215 (313)
T 3ehe_A          140 ASKLACEALIESYCHTF---DMQAWIYRFANVIGRRSTHG-VIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAML  215 (313)
T ss_dssp             HHHHHHHHHHHHHHHHT---TCEEEEEECSCEESTTCCCS-HHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhc---CCCEEEEeeccccCcCCCcC-hHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHH
Confidence            99999999999999984   89999999999998865421 111222222222111        1235788999999999


Q ss_pred             HHhcCCCCCccccEEEecCceeeccC
Q 024145          237 YLASDESSYVSGQNLVVDGGFSVVNP  262 (272)
Q Consensus       237 ~l~s~~~~~~~G~~i~~dgG~~~~~~  262 (272)
                      +++...   ..|+.|++.+|..+..-
T Consensus       216 ~~~~~~---~~~~~~ni~~~~~~s~~  238 (313)
T 3ehe_A          216 FGLRGD---ERVNIFNIGSEDQIKVK  238 (313)
T ss_dssp             HHTTCC---SSEEEEECCCSCCEEHH
T ss_pred             HHhccC---CCCceEEECCCCCeeHH
Confidence            998732   36899999998765433

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.92  E-value=2.3e-24  Score=188.10  Aligned_cols=220  Identities=15%  Similarity=0.152  Sum_probs=162.7

Q ss_pred             EEEEeCCCChHHHHHHHHHHHc---C---CeEEEeecCcc--hHHHHHHHh--CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024145           17 VAIITGGASGIGAMAVELFHEN---G---AKVVIADVQDK--LGEDLADKL--GQDVCYIHCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~---G---~~V~~~~r~~~--~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (272)
                      ++|||||+|+||++++++|+++   |   ++|++++|+..  ..+.+ +.+  +.++.++.+|++|++++++++      
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~------   74 (337)
T 1r6d_A            2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANL-APVDADPRLRFVHGDIRDAGLLAREL------   74 (337)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGG-GGGTTCTTEEEEECCTTCHHHHHHHT------
T ss_pred             eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhh-hhcccCCCeEEEEcCCCCHHHHHHHh------
Confidence            6999999999999999999997   8   99999988642  11111 222  357899999999999887766      


Q ss_pred             hCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccc-----------
Q 024145           87 FGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEI-----------  155 (272)
Q Consensus        87 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~-----------  155 (272)
                       .++|+|||+||....      +.+.+++++.+++|+.++..+++++.+.    +.++||++||.....           
T Consensus        75 -~~~d~Vih~A~~~~~------~~~~~~~~~~~~~Nv~~~~~l~~a~~~~----~~~~~v~~SS~~vyg~~~~~~~~E~~  143 (337)
T 1r6d_A           75 -RGVDAIVHFAAESHV------DRSIAGASVFTETNVQGTQTLLQCAVDA----GVGRVVHVSTNQVYGSIDSGSWTESS  143 (337)
T ss_dssp             -TTCCEEEECCSCCCH------HHHHHCCHHHHHHHTHHHHHHHHHHHHT----TCCEEEEEEEGGGGCCCSSSCBCTTS
T ss_pred             -cCCCEEEECCCccCc------hhhhhCHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEecchHHhCCCCCCCCCCCC
Confidence             379999999996432      1234556789999999999999998874    346899999975432           


Q ss_pred             cCCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcC-C------CCCCCCCh
Q 024145          156 AGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMG-N------LKGEFLKT  228 (272)
Q Consensus       156 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~-~------~~~~~~~~  228 (272)
                      +......|+.||.+.+.+++.++.++   |+++++++|+.+.+|........+........... +      ....+..+
T Consensus       144 ~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  220 (337)
T 1r6d_A          144 PLEPNSPYAASKAGSDLVARAYHRTY---GLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHT  220 (337)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEH
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHHHH---CCCEEEEEeeeeECCCCCCCChHHHHHHHHhcCCCcEEeCCCCeeEeeEeH
Confidence            23345689999999999999999885   79999999999999875421111112222222111 0      11356789


Q ss_pred             HhHHHHHHHHhcCCCCCccccEEEecCceeec
Q 024145          229 DGIANAALYLASDESSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       229 ~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~  260 (272)
                      +|+|+++++++...   .+|+.|++++|..+.
T Consensus       221 ~Dva~a~~~~~~~~---~~g~~~~v~~~~~~s  249 (337)
T 1r6d_A          221 DDHCRGIALVLAGG---RAGEIYHIGGGLELT  249 (337)
T ss_dssp             HHHHHHHHHHHHHC---CTTCEEEECCCCEEE
T ss_pred             HHHHHHHHHHHhCC---CCCCEEEeCCCCCcc
Confidence            99999999988653   278999999997654

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.92  E-value=4.6e-24  Score=186.28  Aligned_cols=219  Identities=18%  Similarity=0.167  Sum_probs=153.9

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHH--HhC---CceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLAD--KLG---QDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~--~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      .++|++|||||+|+||++++++|+++|++|+++.|+....++...  .+.   .++.++.+|++|+++++++++      
T Consensus         3 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   76 (337)
T 2c29_D            3 SQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIK------   76 (337)
T ss_dssp             ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHT------
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHc------
Confidence            367899999999999999999999999999998888764332221  122   258889999999998877665      


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCC---------
Q 024145           88 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGL---------  158 (272)
Q Consensus        88 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~---------  158 (272)
                       .+|+|||+|+...     ...  .+..++.+++|+.++.++++++.+..   ..++||++||..+..+.+         
T Consensus        77 -~~d~Vih~A~~~~-----~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~---~~~riV~~SS~~~~~~~~~~~~~~~E~  145 (337)
T 2c29_D           77 -GCTGVFHVATPMD-----FES--KDPENEVIKPTIEGMLGIMKSCAAAK---TVRRLVFTSSAGTVNIQEHQLPVYDES  145 (337)
T ss_dssp             -TCSEEEECCCCCC-----SSC--SSHHHHTHHHHHHHHHHHHHHHHHHS---CCCEEEEECCGGGTSCSSSCCSEECTT
T ss_pred             -CCCEEEEeccccC-----CCC--CChHHHHHHHHHHHHHHHHHHHHhCC---CccEEEEeeeHhhcccCCCCCcccCcc
Confidence             6899999998532     111  12335789999999999999988754   246899999987543211         


Q ss_pred             -------------CCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHH---HhhcCC--
Q 024145          159 -------------GSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESS---MSQMGN--  220 (272)
Q Consensus       159 -------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~---~~~~~~--  220 (272)
                                   ....|+.||.+.+.+++.++.+   +|+++++++|+.+.+|.....  ........   ......  
T Consensus       146 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~~lrp~~v~Gp~~~~~--~~~~~~~~~~~~~g~~~~~  220 (337)
T 2c29_D          146 CWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKE---NNIDFITIIPTLVVGPFIMSS--MPPSLITALSPITGNEAHY  220 (337)
T ss_dssp             CCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH---HTCCEEEEEECEEESCCSCSS--CCHHHHHHTHHHHTCGGGH
T ss_pred             cCCchhhhcccCCccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCceECCCCCCC--CCchHHHHHHHHcCCCccc
Confidence                         2236999999999999888766   489999999999999975422  11111111   110000  


Q ss_pred             ---CCCCCCChHhHHHHHHHHhcCCCCCccccEEEecCc
Q 024145          221 ---LKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGG  256 (272)
Q Consensus       221 ---~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG  256 (272)
                         ...++..++|+|+++++++...  ...|.+ .+.++
T Consensus       221 ~~~~~~~~i~v~Dva~a~~~~~~~~--~~~~~~-~~~~~  256 (337)
T 2c29_D          221 SIIRQGQFVHLDDLCNAHIYLFENP--KAEGRY-ICSSH  256 (337)
T ss_dssp             HHHTEEEEEEHHHHHHHHHHHHHCT--TCCEEE-EECCE
T ss_pred             cccCCCCEEEHHHHHHHHHHHhcCc--ccCceE-EEeCC
Confidence               1135889999999999988653  235554 44433

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.92  E-value=3.8e-24  Score=192.89  Aligned_cols=226  Identities=15%  Similarity=0.086  Sum_probs=162.7

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchH---HHHHH------------HhCCceEEEEecCCCHH
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLG---EDLAD------------KLGQDVCYIHCDISNED   74 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~---~~~~~------------~~~~~~~~~~~D~~~~~   74 (272)
                      +....+|++|||||+|+||++++++|++.|++|++++|++...   +.+.+            ..+.++.++.+|+++++
T Consensus        64 ~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~  143 (427)
T 4f6c_A           64 LSHRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMD  143 (427)
T ss_dssp             SCCCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---C
T ss_pred             CCCCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcc
Confidence            4456788999999999999999999999999999999987732   22211            12468999999999988


Q ss_pred             HHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccc-
Q 024145           75 EVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACT-  153 (272)
Q Consensus        75 ~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~-  153 (272)
                      ++.        ..+++|+||||||....         .+++.+.+++|+.++..+++++.+     ...++|++||... 
T Consensus       144 ~l~--------~~~~~d~Vih~A~~~~~---------~~~~~~~~~~Nv~g~~~l~~aa~~-----~~~~~v~~SS~~~G  201 (427)
T 4f6c_A          144 DVV--------LPENMDTIIHAGARTDH---------FGDDDEFEKVNVQGTVDVIRLAQQ-----HHARLIYVSTISVG  201 (427)
T ss_dssp             CCC--------CSSCCSEEEECCCCC----------------CHHHHHHHHHHHHHHHHHH-----TTCEEEEEEEGGGG
T ss_pred             cCC--------CcCCCCEEEECCcccCC---------CCCHHHHHHHHHHHHHHHHHHHHh-----cCCcEEEECchHhC
Confidence            876        45689999999997532         256788999999999999999877     3468999999876 


Q ss_pred             c-----------------ccCCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCC------h-h
Q 024145          154 E-----------------IAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVD------P-A  209 (272)
Q Consensus       154 ~-----------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~------~-~  209 (272)
                      .                 .+......|+.||++.+.+++.++.    .|+++++++||.+.++........      . .
T Consensus       202 ~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~  277 (427)
T 4f6c_A          202 TYFDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSM  277 (427)
T ss_dssp             SEECSSCSCCEECTTCSCSSCCCCSHHHHHHHHHHHHHHHHHH----TTCCEEEEEECCEESCSSSCCCCTTGGGCHHHH
T ss_pred             CCccCCCCCccccccccccCCCCCCchHHHHHHHHHHHHHHHH----cCCCEEEEeCCeeecCCCCCccccCcchHHHHH
Confidence            0                 0122567899999999999998764    589999999999999875532111      0 1


Q ss_pred             HHHHHHhhc-C-----CCCCCCCChHhHHHHHHHHhcCCCCCccccEEEecCceeeccCcc
Q 024145          210 LIESSMSQM-G-----NLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVVNPTV  264 (272)
Q Consensus       210 ~~~~~~~~~-~-----~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~~  264 (272)
                      .+....... .     .....++.++|+|+++++++....   .|++|++++|..+....+
T Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~v~v~DvA~ai~~~~~~~~---~g~~~~l~~~~~~s~~el  335 (427)
T 4f6c_A          278 VMNDLLQLDCIGVSMAEMPVDFSFVDTTARQIVALAQVNT---PQIIYHVLSPNKMPVKSL  335 (427)
T ss_dssp             HHHHHHHSSEEEHHHHTCEECCEEHHHHHHHHHHHTTSCC---CCSEEEESCSCCEEHHHH
T ss_pred             HHHHHHhcCCCCCccccceEEEeeHHHHHHHHHHHHcCCC---CCCEEEecCCCCCcHHHH
Confidence            111111111 0     112457889999999999987654   799999999876654333

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.92  E-value=9.2e-25  Score=180.22  Aligned_cols=208  Identities=11%  Similarity=-0.040  Sum_probs=155.6

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEe
Q 024145           16 KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYN   95 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~   95 (272)
                      +++|||||+|+||++++++|+++|++|++++|++.....    ...++.++.+|++|+++++++++       ++|+|||
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~vi~   73 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKI----ENEHLKVKKADVSSLDEVCEVCK-------GADAVIS   73 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCC----CCTTEEEECCCTTCHHHHHHHHT-------TCSEEEE
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchh----ccCceEEEEecCCCHHHHHHHhc-------CCCEEEE
Confidence            689999999999999999999999999999998765422    23678999999999999888776       6899999


Q ss_pred             CCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCC----------CCchhhh
Q 024145           96 NAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGL----------GSPAYTI  165 (272)
Q Consensus        96 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~----------~~~~Y~~  165 (272)
                      ++|....            ..+.+++|+.++..+++++..    .+.+++|++||.....+.+          ....|+.
T Consensus        74 ~a~~~~~------------~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~p~~~Y~~  137 (227)
T 3dhn_A           74 AFNPGWN------------NPDIYDETIKVYLTIIDGVKK----AGVNRFLMVGGAGSLFIAPGLRLMDSGEVPENILPG  137 (227)
T ss_dssp             CCCC------------------CCSHHHHHHHHHHHHHHH----TTCSEEEEECCSTTSEEETTEEGGGTTCSCGGGHHH
T ss_pred             eCcCCCC------------ChhHHHHHHHHHHHHHHHHHH----hCCCEEEEeCChhhccCCCCCccccCCcchHHHHHH
Confidence            9985421            112678899999999888765    3446899999987654432          3568999


Q ss_pred             hHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCC
Q 024145          166 SKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSY  245 (272)
Q Consensus       166 sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  245 (272)
                      +|.+.+.+.+.++.+   .|+++++++||++.+|..........   ............+..++|+|++++.++..+.  
T Consensus       138 sK~~~e~~~~~~~~~---~~~~~~ilrp~~v~g~~~~~~~~~~~---~~~~~~~~~~~~~i~~~Dva~ai~~~l~~~~--  209 (227)
T 3dhn_A          138 VKALGEFYLNFLMKE---KEIDWVFFSPAADMRPGVRTGRYRLG---KDDMIVDIVGNSHISVEDYAAAMIDELEHPK--  209 (227)
T ss_dssp             HHHHHHHHHHTGGGC---CSSEEEEEECCSEEESCCCCCCCEEE---SSBCCCCTTSCCEEEHHHHHHHHHHHHHSCC--
T ss_pred             HHHHHHHHHHHHhhc---cCccEEEEeCCcccCCCccccceeec---CCCcccCCCCCcEEeHHHHHHHHHHHHhCcc--
Confidence            999999988888764   68999999999998886542111100   0000000011456889999999999997654  


Q ss_pred             ccccEEEecCcee
Q 024145          246 VSGQNLVVDGGFS  258 (272)
Q Consensus       246 ~~G~~i~~dgG~~  258 (272)
                      ..|+.+.+.+...
T Consensus       210 ~~g~~~~~~~~~~  222 (227)
T 3dhn_A          210 HHQERFTIGYLEH  222 (227)
T ss_dssp             CCSEEEEEECCSC
T ss_pred             ccCcEEEEEeehh
Confidence            4799999887643

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.92  E-value=1.5e-23  Score=183.53  Aligned_cols=229  Identities=14%  Similarity=0.123  Sum_probs=163.5

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcch----------HHHHHHHhCCceEEEEecCCCHHHHHHHHHHHH
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKL----------GEDLADKLGQDVCYIHCDISNEDEVINLVDTAV   84 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~----------~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   84 (272)
                      +|++|||||+|+||++++++|+++|++|++++|+...          .+.+.+..+.++.++.+|++|.++++++++.. 
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~-   80 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY-   80 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC-
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhc-
Confidence            4789999999999999999999999999999875432          22222223567899999999999988877642 


Q ss_pred             HHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccccccc--------
Q 024145           85 SKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIA--------  156 (272)
Q Consensus        85 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~--------  156 (272)
                          ++|+|||+||....  .    .+.+++.+.+++|+.++..+++++..    .+.++||++||......        
T Consensus        81 ----~~d~vih~A~~~~~--~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~iv~~SS~~~~g~~~~~~~~E  146 (348)
T 1ek6_A           81 ----SFMAVIHFAGLKAV--G----ESVQKPLDYYRVNLTGTIQLLEIMKA----HGVKNLVFSSSATVYGNPQYLPLDE  146 (348)
T ss_dssp             ----CEEEEEECCSCCCH--H----HHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGGGCSCSSSSBCT
T ss_pred             ----CCCEEEECCCCcCc--c----chhhchHHHHHHHHHHHHHHHHHHHH----hCCCEEEEECcHHHhCCCCCCCcCC
Confidence                79999999996532  1    13456788999999999999987654    34578999999765421        


Q ss_pred             ----CCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCccc----CCC----CC-hhHHHHHHh-hcC---
Q 024145          157 ----GLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSM----KGG----VD-PALIESSMS-QMG---  219 (272)
Q Consensus       157 ----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~----~~~----~~-~~~~~~~~~-~~~---  219 (272)
                          .+....|+.||.+++.+++.++.+  ..++++..++|+.+.+|...    ...    .. ...+..... ...   
T Consensus       147 ~~~~~p~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (348)
T 1ek6_A          147 AHPTGGCTNPYGKSKFFIEEMIRDLCQA--DKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALN  224 (348)
T ss_dssp             TSCCCCCSSHHHHHHHHHHHHHHHHHHH--CTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEE
T ss_pred             CCCCCCCCCchHHHHHHHHHHHHHHHhc--CCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeE
Confidence                122568999999999999999988  34699999999999877421    000    00 111112111 111   


Q ss_pred             -----------CCCCCCCChHhHHHHHHHHhcCCCCCccccEEEecCceeec
Q 024145          220 -----------NLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       220 -----------~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~  260 (272)
                                 .....+..++|+|++++.++........++.|++.+|..+.
T Consensus       225 ~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~~~~s  276 (348)
T 1ek6_A          225 VFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYS  276 (348)
T ss_dssp             EECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEE
T ss_pred             EeCCcccCCCCceEEeeEEHHHHHHHHHHHHhcccccCCceEEEeCCCCCcc
Confidence                       01135678999999999888543211224899998886554

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.91  E-value=9e-24  Score=183.01  Aligned_cols=214  Identities=18%  Similarity=0.158  Sum_probs=148.5

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCeEEEeec-Ccch---HHHHHHHhC---CceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGAKVVIADV-QDKL---GEDLADKLG---QDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~~V~~~~r-~~~~---~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      ||++|||||+|+||++++++|+++|++|+++.| ++..   ...+ ..+.   .++.++.+|++|+++++++++      
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   73 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFL-TNLPGASEKLHFFNADLSNPDSFAAAIE------   73 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHH-HTSTTHHHHEEECCCCTTCGGGGHHHHT------
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHH-HhhhccCCceEEEecCCCCHHHHHHHHc------
Confidence            689999999999999999999999999998888 5422   2212 1221   257888999999998887765      


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHH-HHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCC-------
Q 024145           88 GKLDIMYNNAGILDRSFGSILDTPKS-DLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLG-------  159 (272)
Q Consensus        88 g~id~lv~~ag~~~~~~~~~~~~~~~-~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~-------  159 (272)
                       .+|+|||+|+...        .+.+ .+++.+++|+.+++++++++.+..   +.++||++||..+..+.+.       
T Consensus        74 -~~d~vih~A~~~~--------~~~~~~~~~~~~~nv~gt~~l~~aa~~~~---~~~~iV~~SS~~~~~~~~~~~~~~~e  141 (322)
T 2p4h_X           74 -GCVGIFHTASPID--------FAVSEPEEIVTKRTVDGALGILKACVNSK---TVKRFIYTSSGSAVSFNGKDKDVLDE  141 (322)
T ss_dssp             -TCSEEEECCCCC----------------CHHHHHHHHHHHHHHHHHTTCS---SCCEEEEEEEGGGTSCSSSCCSEECT
T ss_pred             -CCCEEEEcCCccc--------CCCCChHHHHHHHHHHHHHHHHHHHHhcC---CccEEEEeccHHHcccCCCCCeecCC
Confidence             6899999996321        1112 235689999999999999887642   3478999999875432211       


Q ss_pred             ------------C---chhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHH---HhhcC-C
Q 024145          160 ------------S---PAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESS---MSQMG-N  220 (272)
Q Consensus       160 ------------~---~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~---~~~~~-~  220 (272)
                                  .   ..|+.||.+.+.+++.++.+   +|+++++++|+++.+|+....  .+......   ..... .
T Consensus       142 ~~~~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrp~~v~g~~~~~~--~~~~~~~~~~~~~g~~~~  216 (322)
T 2p4h_X          142 SDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQ---NGIDVVTLILPFIVGRFVCPK--LPDSIEKALVLVLGKKEQ  216 (322)
T ss_dssp             TCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH---TTCCEEEEEECEEESCCCSSS--CCHHHHHHTHHHHSCGGG
T ss_pred             ccccchhhhcccCcccccHHHHHHHHHHHHHHHHHh---cCCcEEEEcCCceECCCCCCC--CCchHHHHHHHHhCCCcc
Confidence                        1   16999999998888877665   589999999999999976421  11111111   11110 0


Q ss_pred             CC-C--CCCChHhHHHHHHHHhcCCCCCccccEEEecC
Q 024145          221 LK-G--EFLKTDGIANAALYLASDESSYVSGQNLVVDG  255 (272)
Q Consensus       221 ~~-~--~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dg  255 (272)
                      .. .  .+..++|+|++++++++...  .+|+ +++.+
T Consensus       217 ~~~~~~~~i~v~Dva~a~~~~~~~~~--~~g~-~~~~~  251 (322)
T 2p4h_X          217 IGVTRFHMVHVDDVARAHIYLLENSV--PGGR-YNCSP  251 (322)
T ss_dssp             CCEEEEEEEEHHHHHHHHHHHHHSCC--CCEE-EECCC
T ss_pred             CcCCCcCEEEHHHHHHHHHHHhhCcC--CCCC-EEEcC
Confidence            10 1  47899999999999986532  5677 44544

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.91  E-value=5.1e-24  Score=188.98  Aligned_cols=225  Identities=15%  Similarity=0.129  Sum_probs=163.7

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcC-CeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENG-AKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      .++++++|||||+|+||++++++|+++| ++|++++|+.....+... ...++.++.+|++|+++++++++       ++
T Consensus        29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~-~~~~v~~~~~Dl~d~~~l~~~~~-------~~  100 (377)
T 2q1s_A           29 KLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVP-DHPAVRFSETSITDDALLASLQD-------EY  100 (377)
T ss_dssp             GGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSC-CCTTEEEECSCTTCHHHHHHCCS-------CC
T ss_pred             HhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhcc-CCCceEEEECCCCCHHHHHHHhh-------CC
Confidence            4788999999999999999999999999 999999987654221111 13578899999999998776654       79


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCC-CCceEEEEecccccc--------------
Q 024145           91 DIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQ-QKGCILFTASACTEI--------------  155 (272)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~iss~~~~~--------------  155 (272)
                      |+|||+||....      ..+.+++.+.+++|+.++..+++++..    . +.++||++||.....              
T Consensus       101 d~Vih~A~~~~~------~~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~  170 (377)
T 2q1s_A          101 DYVFHLATYHGN------QSSIHDPLADHENNTLTTLKLYERLKH----FKRLKKVVYSAAGCSIAEKTFDDAKATEETD  170 (377)
T ss_dssp             SEEEECCCCSCH------HHHHHCHHHHHHHHTHHHHHHHHHHTT----CSSCCEEEEEEEC--------------CCCC
T ss_pred             CEEEECCCccCc------hhhhhCHHHHHHHHHHHHHHHHHHHHH----hCCCCeEEEeCCHHHcCCCCCCCcCcccccc
Confidence            999999996432      123456788999999999999988743    3 446899999975321              


Q ss_pred             --cC-CCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcc---------cC----CCCChhHHHHHHhhcC
Q 024145          156 --AG-LGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMS---------MK----GGVDPALIESSMSQMG  219 (272)
Q Consensus       156 --~~-~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~---------~~----~~~~~~~~~~~~~~~~  219 (272)
                        +. .....|+.+|.+.+.+++.++.++   |+++++++|+.+.++..         ..    ....+...........
T Consensus       171 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~  247 (377)
T 2q1s_A          171 IVSLHNNDSPYSMSKIFGEFYSVYYHKQH---QLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMP  247 (377)
T ss_dssp             CCCSSCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCC
T ss_pred             cccccCCCCchHHHHHHHHHHHHHHHHHh---CCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCC
Confidence              21 345689999999999999999875   79999999999999875         21    0001112222222111


Q ss_pred             -C------CCCCCCChHhHHHH-HHHHhcCCCCCccccEEEecCceeecc
Q 024145          220 -N------LKGEFLKTDGIANA-ALYLASDESSYVSGQNLVVDGGFSVVN  261 (272)
Q Consensus       220 -~------~~~~~~~~~dva~~-~~~l~s~~~~~~~G~~i~~dgG~~~~~  261 (272)
                       .      ....+..++|+|++ +++++....   +| .|++++|..+..
T Consensus       248 ~~~~g~g~~~~~~i~v~Dva~a~i~~~~~~~~---~g-~~~i~~~~~~s~  293 (377)
T 2q1s_A          248 LPLENGGVATRDFIFVEDVANGLIACAADGTP---GG-VYNIASGKETSI  293 (377)
T ss_dssp             CCCSGGGCCEECCEEHHHHHHHHHHHHHHCCT---TE-EEECCCCCCEEH
T ss_pred             eEEeCCCCeEEeeEEHHHHHHHHHHHHHhcCC---CC-eEEecCCCceeH
Confidence             1      11356779999999 999887643   68 999999866543

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.91  E-value=5.7e-24  Score=185.21  Aligned_cols=222  Identities=14%  Similarity=0.067  Sum_probs=165.3

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHH-HcCCeEEEeecCcchH---------------HHHHHHhCCceEEEEecCCCHHH
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFH-ENGAKVVIADVQDKLG---------------EDLADKLGQDVCYIHCDISNEDE   75 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la-~~G~~V~~~~r~~~~~---------------~~~~~~~~~~~~~~~~D~~~~~~   75 (272)
                      .+.+|++||||||+|||+|++.+|+ +.|++++++.+..+..               .+..++.+.....+.||++++++
T Consensus        47 ~~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~  126 (401)
T 4ggo_A           47 AKAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEI  126 (401)
T ss_dssp             SCCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHH
T ss_pred             cCCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHH
Confidence            4567999999999999999999999 6899999988754322               23445568899999999999999


Q ss_pred             HHHHHHHHHHHhCCccEEEeCCCCCCCCC-----------CC---------------------CCCCCHHHHHHHH---H
Q 024145           76 VINLVDTAVSKFGKLDIMYNNAGILDRSF-----------GS---------------------ILDTPKSDLERLI---N  120 (272)
Q Consensus        76 ~~~~~~~~~~~~g~id~lv~~ag~~~~~~-----------~~---------------------~~~~~~~~~~~~~---~  120 (272)
                      ++++++++++++|++|+||||++......           ++                     +...+.++++.+.   .
T Consensus       127 i~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~vMg  206 (401)
T 4ggo_A          127 KAQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVKVMG  206 (401)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHHHHh
Confidence            99999999999999999999999764210           01                     1123455555444   4


Q ss_pred             HHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCC--CCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccC
Q 024145          121 VNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGL--GSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLAT  198 (272)
Q Consensus       121 ~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~--~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t  198 (272)
                      ...++.+...+...+.|  ..+++++.+|+.+.....|  .+..++.+|++|++.++.|+.++++  +++|+++|+.+.|
T Consensus       207 ~s~~s~w~~al~~a~ll--a~G~siva~SYiGse~t~P~Y~~G~mG~AKaaLEa~~r~La~eL~~--~~a~v~v~~a~vT  282 (401)
T 4ggo_A          207 GEDWERWIKQLSKEGLL--EEGCITLAYSYIGPEATQALYRKGTIGKAKEHLEATAHRLNKENPS--IRAFVSVNKGLVT  282 (401)
T ss_dssp             SHHHHHHHHHHHHTTCE--EEEEEEEEEECCCCGGGHHHHTTSHHHHHHHHHHHHHHHHHHHCTT--EEEEEEECCCCCC
T ss_pred             hhHHHHHHHHHHhhhcc--cCCceEEEEeccCcceeecCCCccHHHHHHHHHHHHHHHHHHhcCC--CcEEEEEcCcccc
Confidence            45556666666666666  3569999999988876555  3457899999999999999999974  8999999999999


Q ss_pred             CcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcC
Q 024145          199 GMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASD  241 (272)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  241 (272)
                      .........+- ....+.+.   +.+..+.|.+.+.+..|..+
T Consensus       283 ~AssaIP~~pl-y~~~l~kv---mk~~g~heg~ieq~~rl~~~  321 (401)
T 4ggo_A          283 RASAVIPVIPL-YLASLFKV---MKEKGNHEGCIEQITRLYAE  321 (401)
T ss_dssp             TTGGGSSSHHH-HHHHHHHH---HHHHTCCCCHHHHHHHHHHH
T ss_pred             chhhcCCCchH-HHHHHHHH---HHhcCCCCchHHHHHHHHHH
Confidence            98775432222 22222111   13445678888888888754

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.91  E-value=4e-24  Score=189.09  Aligned_cols=230  Identities=15%  Similarity=0.096  Sum_probs=167.1

Q ss_pred             ccCCCCCCcEEEEeCCCChHHHHHHHHHHHc-CCeEEEeecCcchHHHHHHHhCCceEEEEecCC-CHHHHHHHHHHHHH
Q 024145            8 APFKRLEGKVAIITGGASGIGAMAVELFHEN-GAKVVIADVQDKLGEDLADKLGQDVCYIHCDIS-NEDEVINLVDTAVS   85 (272)
Q Consensus         8 ~~~~~l~~k~vlItGas~giG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~   85 (272)
                      ..+.++++|++|||||+|+||++++++|+++ |++|++++|+......+.+  ..++.++.+|++ +.++++++++    
T Consensus        17 ~~~~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~--~~~v~~~~~Dl~~d~~~~~~~~~----   90 (372)
T 3slg_A           17 QGPGSMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVK--HERMHFFEGDITINKEWVEYHVK----   90 (372)
T ss_dssp             ------CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGG--STTEEEEECCTTTCHHHHHHHHH----
T ss_pred             cCCcccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhcc--CCCeEEEeCccCCCHHHHHHHhc----
Confidence            3456678899999999999999999999998 9999999998766543322  257999999999 9999888776    


Q ss_pred             HhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccC--------
Q 024145           86 KFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAG--------  157 (272)
Q Consensus        86 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~--------  157 (272)
                         ++|+|||+|+.....      ...++..+.+++|+.++..+++++...    + .++|++||.......        
T Consensus        91 ---~~d~Vih~A~~~~~~------~~~~~~~~~~~~nv~~~~~ll~a~~~~----~-~~~v~~SS~~vyg~~~~~~~~e~  156 (372)
T 3slg_A           91 ---KCDVILPLVAIATPA------TYVKQPLRVFELDFEANLPIVRSAVKY----G-KHLVFPSTSEVYGMCADEQFDPD  156 (372)
T ss_dssp             ---HCSEEEECBCCCCHH------HHHHCHHHHHHHHTTTTHHHHHHHHHH----T-CEEEEECCGGGGBSCCCSSBCTT
T ss_pred             ---cCCEEEEcCccccHH------HHhhCHHHHHHHHHHHHHHHHHHHHHh----C-CcEEEeCcHHHhCCCCCCCCCcc
Confidence               589999999975431      124556788999999999999988653    3 689999996543221        


Q ss_pred             ----------CCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCC----CC----hhHHHHHHhhcC
Q 024145          158 ----------LGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGG----VD----PALIESSMSQMG  219 (272)
Q Consensus       158 ----------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~----~~----~~~~~~~~~~~~  219 (272)
                                .....|+.+|.+.+.+++.++.+    |+++.+++|+.+.+|......    ..    ............
T Consensus       157 ~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~----g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (372)
T 3slg_A          157 ASALTYGPINKPRWIYACSKQLMDRVIWGYGME----GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEN  232 (372)
T ss_dssp             TCCEEECCTTCTTHHHHHHHHHHHHHHHHHHTT----TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCC
T ss_pred             ccccccCCCCCCCCcHHHHHHHHHHHHHHHHHC----CCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCC
Confidence                      12237999999999999988765    899999999999988754210    01    112222222211


Q ss_pred             -------CCCCCCCChHhHHHHHHHHhcCCCCCccccEEEecC-ceeecc
Q 024145          220 -------NLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDG-GFSVVN  261 (272)
Q Consensus       220 -------~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dg-G~~~~~  261 (272)
                             .....+..++|+|++++.++........|++|++.+ |..++.
T Consensus       233 ~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~~s~  282 (372)
T 3slg_A          233 ISLVDGGSQKRAFTYVDDGISALMKIIENSNGVATGKIYNIGNPNNNFSV  282 (372)
T ss_dssp             EEEGGGGCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTCEEEH
T ss_pred             cEEeCCCceEEEEEEHHHHHHHHHHHHhcccCcCCCceEEeCCCCCCccH
Confidence                   111357789999999999987654445799999999 555543

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.91  E-value=6.5e-23  Score=181.13  Aligned_cols=227  Identities=12%  Similarity=0.092  Sum_probs=158.7

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchH-----HHHHHH---hCCceEEEEecCCCHHHHHHHHHHHHHH
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLG-----EDLADK---LGQDVCYIHCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~-----~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (272)
                      +|++|||||+|+||++++++|+++|++|++++|+....     +.+.+.   .+.++.++.+|++|.++++++++..   
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   77 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV---   77 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH---
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhc---
Confidence            37899999999999999999999999999999876531     111111   1357889999999999998888765   


Q ss_pred             hCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccccccc----------
Q 024145           87 FGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIA----------  156 (272)
Q Consensus        87 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~----------  156 (272)
                        ++|+|||+||....      ..+.+++...+++|+.++..+++++.+...+ +.++||++||......          
T Consensus        78 --~~d~vih~A~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~iv~~SS~~v~g~~~~~~~~E~~  148 (372)
T 1db3_A           78 --QPDEVYNLGAMSHV------AVSFESPEYTADVDAMGTLRLLEAIRFLGLE-KKTRFYQASTSELYGLVQEIPQKETT  148 (372)
T ss_dssp             --CCSEEEECCCCCTT------TTTTSCHHHHHHHHTHHHHHHHHHHHHTTCT-TTCEEEEEEEGGGGTTCCSSSBCTTS
T ss_pred             --CCCEEEECCcccCc------cccccCHHHHHHHHHHHHHHHHHHHHHhCCC-CCcEEEEeCChhhhCCCCCCCCCccC
Confidence              68999999997532      1234557788999999999999999886643 3478999999765432          


Q ss_pred             -CCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCC---hhHHHHHHhhcCC--------CCCC
Q 024145          157 -GLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVD---PALIESSMSQMGN--------LKGE  224 (272)
Q Consensus       157 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~---~~~~~~~~~~~~~--------~~~~  224 (272)
                       ......|+.||++++.+++.++.++   |+.+..+.|..+..|........   ...+........+        ....
T Consensus       149 ~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~  225 (372)
T 1db3_A          149 PFYPRSPYAVAKLYAYWITVNYRESY---GMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRD  225 (372)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEEC
T ss_pred             CCCCCChHHHHHHHHHHHHHHHHHHh---CCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceee
Confidence             1235689999999999999999885   57777778777666643211000   0111111111111        1135


Q ss_pred             CCChHhHHHHHHHHhcCCCCCccccEEEecCceeec
Q 024145          225 FLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       225 ~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~  260 (272)
                      +..++|+|++++.++....    ++.+++.+|..+.
T Consensus       226 ~i~v~Dva~a~~~~~~~~~----~~~~ni~~~~~~s  257 (372)
T 1db3_A          226 WGHAKDYVKMQWMMLQQEQ----PEDFVIATGVQYS  257 (372)
T ss_dssp             CEEHHHHHHHHHHTTSSSS----CCCEEECCCCCEE
T ss_pred             eeEHHHHHHHHHHHHhcCC----CceEEEcCCCcee
Confidence            7889999999998876532    4678888776554

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.91  E-value=4.9e-23  Score=183.52  Aligned_cols=169  Identities=19%  Similarity=0.192  Sum_probs=134.0

Q ss_pred             CcEEEEeCCCChHHHHHHHHHH-HcCCeEEEeecCcch---------HHHH---HHHhC-----Cc---eEEEEecCCCH
Q 024145           15 GKVAIITGGASGIGAMAVELFH-ENGAKVVIADVQDKL---------GEDL---ADKLG-----QD---VCYIHCDISNE   73 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la-~~G~~V~~~~r~~~~---------~~~~---~~~~~-----~~---~~~~~~D~~~~   73 (272)
                      ++++|||||+|+||++++++|+ ++|++|++++|+...         .+.+   .+++.     .+   +.++.+|++|+
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~   81 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence            3589999999999999999999 999999999987543         2333   22221     24   88999999999


Q ss_pred             HHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccc
Q 024145           74 DEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACT  153 (272)
Q Consensus        74 ~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~  153 (272)
                      +++++++++    ++++|+|||+||.....      .+.+++++.+++|+.+++.+++++..    .+.++||++||...
T Consensus        82 ~~~~~~~~~----~~~~d~vih~A~~~~~~------~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~~~~iv~~SS~~v  147 (397)
T 1gy8_A           82 DFLNGVFTR----HGPIDAVVHMCAFLAVG------ESVRDPLKYYDNNVVGILRLLQAMLL----HKCDKIIFSSSAAI  147 (397)
T ss_dssp             HHHHHHHHH----SCCCCEEEECCCCCCHH------HHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGG
T ss_pred             HHHHHHHHh----cCCCCEEEECCCccCcC------cchhhHHHHHHHHhHHHHHHHHHHHH----hCCCEEEEECCHHH
Confidence            998877653    45699999999975421      13466788999999999999998754    34578999999654


Q ss_pred             cccCC------------------CCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCc
Q 024145          154 EIAGL------------------GSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGM  200 (272)
Q Consensus       154 ~~~~~------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~  200 (272)
                      .....                  ....|+.||++++.+++.++.++   |+++++++|+.+.+|.
T Consensus       148 ~g~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilRp~~v~G~~  209 (397)
T 1gy8_A          148 FGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY---GIKGICLRYFNACGAH  209 (397)
T ss_dssp             TBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECCC
T ss_pred             hCCCCcccccccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHH---CCcEEEEeccceeCCC
Confidence            32211                  24689999999999999999986   8999999999998875

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.91  E-value=2.7e-24  Score=189.23  Aligned_cols=227  Identities=16%  Similarity=0.169  Sum_probs=159.0

Q ss_pred             cCCCCCCcEEEEeCCCChHHHHHHHHHHHcC-CeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145            9 PFKRLEGKVAIITGGASGIGAMAVELFHENG-AKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      .+.++++|++|||||+|+||++++++|+++| ++|++++|+.....  .+.+. .+. +.+|+++.++++++++.  ..+
T Consensus        40 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~-~~~-~~~d~~~~~~~~~~~~~--~~~  113 (357)
T 2x6t_A           40 GGSGIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLV-DLN-IADYMDKEDFLIQIMAG--EEF  113 (357)
T ss_dssp             --------CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG--GGGTT-TSC-CSEEEEHHHHHHHHHTT--CCC
T ss_pred             ccccCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch--hhccc-Cce-EeeecCcHHHHHHHHhh--ccc
Confidence            3556788999999999999999999999999 89999998765421  11121 223 67899999888776653  124


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCC---------
Q 024145           88 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGL---------  158 (272)
Q Consensus        88 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~---------  158 (272)
                      +++|+|||+||....        +.+++++.+++|+.++..+++++.+.    +. +||++||........         
T Consensus       114 ~~~d~Vih~A~~~~~--------~~~~~~~~~~~n~~~~~~ll~a~~~~----~~-r~V~~SS~~v~g~~~~~~~~E~~~  180 (357)
T 2x6t_A          114 GDVEAIFHEGACSST--------TEWDGKYMMDNNYQYSKELLHYCLER----EI-PFLYASSAATYGGRTSDFIESREY  180 (357)
T ss_dssp             SSCCEEEECCSCCCT--------TCCCHHHHHHHTHHHHHHHHHHHHHH----TC-CEEEEEEGGGGCSCSSCCCSSGGG
T ss_pred             CCCCEEEECCcccCC--------ccCCHHHHHHHHHHHHHHHHHHHHHc----CC-eEEEEcchHHhCCCCCCCcCCcCC
Confidence            579999999996532        22356788999999999999998773    33 799999986543322         


Q ss_pred             --CCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCC---C-ChhHHHHHHhhcC-----C--C-CCC
Q 024145          159 --GSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGG---V-DPALIESSMSQMG-----N--L-KGE  224 (272)
Q Consensus       159 --~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~---~-~~~~~~~~~~~~~-----~--~-~~~  224 (272)
                        ....|+.+|.+.+.+++.++.+   .|+++++++|+.+.+|......   . .............     .  . ...
T Consensus       181 ~~p~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (357)
T 2x6t_A          181 EKPLNVFGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRD  257 (357)
T ss_dssp             CCCSSHHHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEEC
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEc
Confidence              2558999999999999999877   4899999999999988643110   0 0111111111111     0  1 235


Q ss_pred             CCChHhHHHHHHHHhcCCCCCccccEEEecCceeecc
Q 024145          225 FLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVVN  261 (272)
Q Consensus       225 ~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~  261 (272)
                      +..++|+|+++++++....    |+.|++++|..+..
T Consensus       258 ~i~v~Dva~ai~~~~~~~~----~~~~~i~~~~~~s~  290 (357)
T 2x6t_A          258 FVYVGDVADVNLWFLENGV----SGIFNLGTGRAESF  290 (357)
T ss_dssp             EEEHHHHHHHHHHHHHHCC----CEEEEESCSCCEEH
T ss_pred             cEEHHHHHHHHHHHHhcCC----CCeEEecCCCcccH
Confidence            6789999999999987543    88999998876543

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.91  E-value=3.1e-23  Score=181.18  Aligned_cols=222  Identities=13%  Similarity=0.065  Sum_probs=161.0

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHc-CCeEEEeecCcchHHHHHHHhCCceEEEEecCCC-HHHHHHHHHHHHHHhCCccEE
Q 024145           16 KVAIITGGASGIGAMAVELFHEN-GAKVVIADVQDKLGEDLADKLGQDVCYIHCDISN-EDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~id~l   93 (272)
                      +++|||||+|+||++++++|+++ |++|++++|+....+.+.+  ..++.++.+|++| .+.++++++       ++|+|
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~-------~~d~v   71 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLN--HPHFHFVEGDISIHSEWIEYHVK-------KCDVV   71 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTT--CTTEEEEECCTTTCSHHHHHHHH-------HCSEE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhc--CCCeEEEeccccCcHHHHHhhcc-------CCCEE
Confidence            47999999999999999999998 8999999998765433221  2468899999998 456666554       58999


Q ss_pred             EeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCC---------------
Q 024145           94 YNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGL---------------  158 (272)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~---------------  158 (272)
                      ||+||...+.      ...+++.+.+++|+.++..+++++.+    .+ +++|++||........               
T Consensus        72 ih~A~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~  140 (345)
T 2bll_A           72 LPLVAIATPI------EYTRNPLRVFELDFEENLRIIRYCVK----YR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGP  140 (345)
T ss_dssp             EECBCCCCHH------HHHHSHHHHHHHHTHHHHHHHHHHHH----TT-CEEEEECCGGGGBTCCCSSBCTTTCCCBCCC
T ss_pred             EEcccccCcc------chhcCHHHHHHHHHHHHHHHHHHHHH----hC-CeEEEEecHHHcCCCCCCCcCCcccccccCc
Confidence            9999975320      11345678899999999999998865    23 7899999976542211               


Q ss_pred             ---CCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCC----C-C---hhHHHHHHhhcCC-------
Q 024145          159 ---GSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGG----V-D---PALIESSMSQMGN-------  220 (272)
Q Consensus       159 ---~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~----~-~---~~~~~~~~~~~~~-------  220 (272)
                         ....|+.+|.+.+.+++.++.++   |+++++++|+.+.+|......    . .   .............       
T Consensus       141 ~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  217 (345)
T 2bll_A          141 VNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGK  217 (345)
T ss_dssp             TTCGGGHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSC
T ss_pred             ccCcccccHHHHHHHHHHHHHHHHhc---CCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCC
Confidence               11279999999999999999874   799999999999988753210    0 0   1122222221110       


Q ss_pred             CCCCCCChHhHHHHHHHHhcCCCCCccccEEEecCce-eec
Q 024145          221 LKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGF-SVV  260 (272)
Q Consensus       221 ~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~-~~~  260 (272)
                      ....+..++|+|++++.++.......+|+.|++.+|. .+.
T Consensus       218 ~~~~~i~v~Dva~a~~~~~~~~~~~~~g~~~~i~~~~~~~s  258 (345)
T 2bll_A          218 QKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEAS  258 (345)
T ss_dssp             CEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTSEEE
T ss_pred             EEEEEEEHHHHHHHHHHHHhhccccCCCceEEeCCCCCCCC
Confidence            1124788999999999998765434579999999984 443

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.91  E-value=3.2e-23  Score=180.23  Aligned_cols=224  Identities=14%  Similarity=0.130  Sum_probs=162.1

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEe
Q 024145           16 KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYN   95 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~   95 (272)
                      |++|||||+|+||++++++|+++|++|++++|+.....   +.+..++.++.+|++|.+++++++++     .++|+|||
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~vih   73 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE---DAITEGAKFYNGDLRDKAFLRDVFTQ-----ENIEAVMH   73 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG---GGSCTTSEEEECCTTCHHHHHHHHHH-----SCEEEEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch---hhcCCCcEEEECCCCCHHHHHHHHhh-----cCCCEEEE
Confidence            57999999999999999999999999999998754322   23334688999999999998887764     37999999


Q ss_pred             CCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccccccc-----------CCCCchhh
Q 024145           96 NAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIA-----------GLGSPAYT  164 (272)
Q Consensus        96 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~-----------~~~~~~Y~  164 (272)
                      +||....      ..+.+++.+.+++|+.++..+++++..    .+.+++|++||......           ......|+
T Consensus        74 ~a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~~Y~  143 (330)
T 2c20_A           74 FAADSLV------GVSMEKPLQYYNNNVYGALCLLEVMDE----FKVDKFIFSSTAATYGEVDVDLITEETMTNPTNTYG  143 (330)
T ss_dssp             CCCCCCH------HHHHHSHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEECCGGGGCSCSSSSBCTTSCCCCSSHHH
T ss_pred             CCcccCc------cccccCHHHHHHHHhHHHHHHHHHHHH----cCCCEEEEeCCceeeCCCCCCCCCcCCCCCCCChHH
Confidence            9996532      113466788999999999999998754    34578999999765432           12356899


Q ss_pred             hhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCC-------CC-hhHHHHHHhhcCC---------------C
Q 024145          165 ISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGG-------VD-PALIESSMSQMGN---------------L  221 (272)
Q Consensus       165 ~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~-------~~-~~~~~~~~~~~~~---------------~  221 (272)
                      .+|.+.+.+++.++.+   .|+++++++|+.+.++......       .. ............+               .
T Consensus       144 ~sK~~~e~~~~~~~~~---~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~  220 (330)
T 2c20_A          144 ETKLAIEKMLHWYSQA---SNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTC  220 (330)
T ss_dssp             HHHHHHHHHHHHHHHT---SSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSC
T ss_pred             HHHHHHHHHHHHHHHH---hCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCce
Confidence            9999999999999887   4899999999999988521100       00 1111111111110               0


Q ss_pred             CCCCCChHhHHHHHHHHhcCCCCCccccEEEecCceeec
Q 024145          222 KGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       222 ~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~  260 (272)
                      ...+..++|+|++++.++........++.|++.+|..+.
T Consensus       221 ~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s  259 (330)
T 2c20_A          221 IRDYIHVEDLVAAHFLGLKDLQNGGESDFYNLGNGNGFS  259 (330)
T ss_dssp             EECEEEHHHHHHHHHHHHHHHHTTCCCEEEECCCTTCBC
T ss_pred             eEeeEeHHHHHHHHHHHHhccccCCCCCeEEeCCCCCcc
Confidence            124677899999999887543221246889998876554

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.91  E-value=1.2e-23  Score=177.92  Aligned_cols=192  Identities=16%  Similarity=0.133  Sum_probs=148.8

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEe
Q 024145           16 KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYN   95 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~   95 (272)
                      |++|||||+|+||++++++|+++|++|++++|++...      ...++.++.+|++|+++++++++       ++|+|||
T Consensus         3 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~------~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~vi~   69 (267)
T 3ay3_A            3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGA------AEAHEEIVACDLADAQAVHDLVK-------DCDGIIH   69 (267)
T ss_dssp             EEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCC------CCTTEEECCCCTTCHHHHHHHHT-------TCSEEEE
T ss_pred             ceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCccc------cCCCccEEEccCCCHHHHHHHHc-------CCCEEEE
Confidence            6899999999999999999999999999999987532      12357889999999999887765       6899999


Q ss_pred             CCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCC------------CCchh
Q 024145           96 NAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGL------------GSPAY  163 (272)
Q Consensus        96 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~------------~~~~Y  163 (272)
                      +||...          .+++++.+++|+.++..+++++.+    .+.++||++||.......+            ....|
T Consensus        70 ~a~~~~----------~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~~~Y  135 (267)
T 3ay3_A           70 LGGVSV----------ERPWNDILQANIIGAYNLYEAARN----LGKPRIVFASSNHTIGYYPRTTRIDTEVPRRPDSLY  135 (267)
T ss_dssp             CCSCCS----------CCCHHHHHHHTHHHHHHHHHHHHH----TTCCEEEEEEEGGGSTTSBTTSCBCTTSCCCCCSHH
T ss_pred             CCcCCC----------CCCHHHHHHHHHHHHHHHHHHHHH----hCCCEEEEeCCHHHhCCCCCCCCCCCCCCCCCCChH
Confidence            999642          134578899999999999998875    3457899999987654322            34689


Q ss_pred             hhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCccc-CCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCC
Q 024145          164 TISKYGILGLVKCLAAELGQYGIRVNCVSPYGLA-TGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDE  242 (272)
Q Consensus       164 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  242 (272)
                      +.+|++++.+++.++.+   .|+++++++||++. ++..      ..    .       ...+.+++|+|++++.++...
T Consensus       136 ~~sK~~~e~~~~~~~~~---~gi~~~~lrp~~v~~~~~~------~~----~-------~~~~~~~~dva~~~~~~~~~~  195 (267)
T 3ay3_A          136 GLSKCFGEDLASLYYHK---FDIETLNIRIGSCFPKPKD------AR----M-------MATWLSVDDFMRLMKRAFVAP  195 (267)
T ss_dssp             HHHHHHHHHHHHHHHHT---TCCCEEEEEECBCSSSCCS------HH----H-------HHHBCCHHHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHHHHHHHHH---cCCCEEEEeceeecCCCCC------CC----e-------eeccccHHHHHHHHHHHHhCC
Confidence            99999999999988754   68999999999984 3321      11    0       135689999999999988654


Q ss_pred             CCCccccEEEecCc
Q 024145          243 SSYVSGQNLVVDGG  256 (272)
Q Consensus       243 ~~~~~G~~i~~dgG  256 (272)
                      ..  .+..+++.++
T Consensus       196 ~~--~~~~~~~~~~  207 (267)
T 3ay3_A          196 KL--GCTVVYGASA  207 (267)
T ss_dssp             CC--CEEEEEECCS
T ss_pred             CC--CceeEecCCC
Confidence            32  2345555444

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.90  E-value=9.8e-23  Score=180.43  Aligned_cols=226  Identities=12%  Similarity=0.048  Sum_probs=162.5

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcch-----HHHHHHH----hCCceEEEEecCCCHHHHHHHHHHHHHH
Q 024145           16 KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKL-----GEDLADK----LGQDVCYIHCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~-----~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (272)
                      |++|||||+|+||++++++|+++|++|++++|+...     .+.+.+.    .+.++.++.+|++|+++++++++.+   
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---  101 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV---  101 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH---
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhc---
Confidence            689999999999999999999999999999987543     2211111    1346889999999999998888765   


Q ss_pred             hCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccccccc----------
Q 024145           87 FGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIA----------  156 (272)
Q Consensus        87 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~----------  156 (272)
                        ++|+|||+||....      ..+.+++++.+++|+.++..+++++.+...+ +.++||++||......          
T Consensus       102 --~~d~vih~A~~~~~------~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~-~~~~iv~~SS~~~~~~~~~~~~~E~~  172 (375)
T 1t2a_A          102 --KPTEIYNLGAQSHV------KISFDLAEYTADVDGVGTLRLLDAVKTCGLI-NSVKFYQASTSELYGKVQEIPQKETT  172 (375)
T ss_dssp             --CCSEEEECCSCCCH------HHHHHSHHHHHHHHTHHHHHHHHHHHHTTCT-TTCEEEEEEEGGGTCSCSSSSBCTTS
T ss_pred             --CCCEEEECCCcccc------cccccCHHHHHHHHHHHHHHHHHHHHHhCCC-ccceEEEecchhhhCCCCCCCCCccC
Confidence              68999999996432      1234667889999999999999999886642 3478999999866432          


Q ss_pred             -CCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCC---hhHHHHHHhhcCC--------CCCC
Q 024145          157 -GLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVD---PALIESSMSQMGN--------LKGE  224 (272)
Q Consensus       157 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~---~~~~~~~~~~~~~--------~~~~  224 (272)
                       ......|+.+|++++.+++.++.++   ++.+..+.|+.+..|........   ...+........+        ....
T Consensus       173 ~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~  249 (375)
T 1t2a_A          173 PFYPRSPYGAAKLYAYWIVVNFREAY---NLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRD  249 (375)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEEC
T ss_pred             CCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceee
Confidence             2245689999999999999999884   68888899888777653311100   0111111222111        1135


Q ss_pred             CCChHhHHHHHHHHhcCCCCCccccEEEecCceeec
Q 024145          225 FLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       225 ~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~  260 (272)
                      +..++|+|++++.++....    ++.+++.+|..+.
T Consensus       250 ~i~v~Dva~a~~~~~~~~~----~~~~ni~~~~~~s  281 (375)
T 1t2a_A          250 WGHAKDYVEAMWLMLQNDE----PEDFVIATGEVHS  281 (375)
T ss_dssp             CEEHHHHHHHHHHHHHSSS----CCCEEECCSCCEE
T ss_pred             eEEHHHHHHHHHHHHhcCC----CceEEEeCCCccc
Confidence            7789999999999886542    3678887776543

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.90  E-value=8.2e-23  Score=181.27  Aligned_cols=228  Identities=12%  Similarity=0.005  Sum_probs=162.7

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcch-----HHHHHHHh---CC-ceEEEEecCCCHHHHHHHHHHHHHH
Q 024145           16 KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKL-----GEDLADKL---GQ-DVCYIHCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~-----~~~~~~~~---~~-~~~~~~~D~~~~~~~~~~~~~~~~~   86 (272)
                      |++|||||+|+||++++++|+++|++|++++|+...     .+.+.+..   +. ++.++.+|++|.++++++++.+   
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---  105 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI---  105 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH---
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhc---
Confidence            689999999999999999999999999999987653     22211111   22 6889999999999998888765   


Q ss_pred             hCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcC-CCCceEEEEecccccc----------
Q 024145           87 FGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVP-QQKGCILFTASACTEI----------  155 (272)
Q Consensus        87 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~g~iv~iss~~~~~----------  155 (272)
                        ++|+|||+||....      ..+.+++...+++|+.++..+++++.+...+ .+.++||++||.....          
T Consensus       106 --~~d~Vih~A~~~~~------~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~E~~  177 (381)
T 1n7h_A          106 --KPDEVYNLAAQSHV------AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETT  177 (381)
T ss_dssp             --CCSEEEECCSCCCH------HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTS
T ss_pred             --CCCEEEECCcccCc------cccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCCCCCCCC
Confidence              68999999996532      1235668899999999999999999987654 2346999999986533          


Q ss_pred             cCCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCC---hhHHHHHHhhcC--------CCCCC
Q 024145          156 AGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVD---PALIESSMSQMG--------NLKGE  224 (272)
Q Consensus       156 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~---~~~~~~~~~~~~--------~~~~~  224 (272)
                      +......|+.+|.+.+.+++.++.++   |+.+..+.|..+..|........   ............        .....
T Consensus       178 ~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~  254 (381)
T 1n7h_A          178 PFHPRSPYAASKCAAHWYTVNYREAY---GLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRD  254 (381)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEE
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceee
Confidence            23345689999999999999999885   56666666655555443211000   011111111111        11135


Q ss_pred             CCChHhHHHHHHHHhcCCCCCccccEEEecCceeecc
Q 024145          225 FLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVVN  261 (272)
Q Consensus       225 ~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~  261 (272)
                      +..++|+|+++++++....    ++.|++.+|..+..
T Consensus       255 ~v~v~Dva~a~~~~~~~~~----~~~~~i~~~~~~s~  287 (381)
T 1n7h_A          255 WGFAGDYVEAMWLMLQQEK----PDDYVVATEEGHTV  287 (381)
T ss_dssp             CEEHHHHHHHHHHHHTSSS----CCEEEECCSCEEEH
T ss_pred             eEEHHHHHHHHHHHHhCCC----CCeEEeeCCCCCcH
Confidence            7889999999999987643    47899998876543

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.90  E-value=2.8e-23  Score=179.52  Aligned_cols=213  Identities=12%  Similarity=0.038  Sum_probs=129.2

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEE
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMY   94 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv   94 (272)
                      +|++|||||+|+||++++++|+++|++|++++|+...        + +  ++.+|++|+++++++++..     ++|+||
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~--------~-~--~~~~Dl~d~~~~~~~~~~~-----~~d~vi   65 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR--------P-K--FEQVNLLDSNAVHHIIHDF-----QPHVIV   65 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC-----------------------------CHHHHHHH-----CCSEEE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC--------C-C--eEEecCCCHHHHHHHHHhh-----CCCEEE
Confidence            5799999999999999999999999999999986543        1 2  6789999999988887754     699999


Q ss_pred             eCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccccccc----------CCCCchhh
Q 024145           95 NNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIA----------GLGSPAYT  164 (272)
Q Consensus        95 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~----------~~~~~~Y~  164 (272)
                      |+||....      ..+.+++++.+++|+.++..+++++.+.    + +++|++||.....+          ......|+
T Consensus        66 h~A~~~~~------~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~-~~~v~~SS~~v~~~~~~~~~E~~~~~~~~~Y~  134 (315)
T 2ydy_A           66 HCAAERRP------DVVENQPDAASQLNVDASGNLAKEAAAV----G-AFLIYISSDYVFDGTNPPYREEDIPAPLNLYG  134 (315)
T ss_dssp             ECC-------------------------CHHHHHHHHHHHHH----T-CEEEEEEEGGGSCSSSCSBCTTSCCCCCSHHH
T ss_pred             ECCcccCh------hhhhcCHHHHHHHHHHHHHHHHHHHHHc----C-CeEEEEchHHHcCCCCCCCCCCCCCCCcCHHH
Confidence            99997532      1245678899999999999999998863    2 48999999876543          34456899


Q ss_pred             hhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCC-CCChhHHHHHH-hhc-----CCCCCCCCChHhHHHHHHH
Q 024145          165 ISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKG-GVDPALIESSM-SQM-----GNLKGEFLKTDGIANAALY  237 (272)
Q Consensus       165 ~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~-~~~~~~~~~~~-~~~-----~~~~~~~~~~~dva~~~~~  237 (272)
                      .+|.+++.+++.++.       .+..++|+.+.++..... ........... ...     ......+..++|+|+++++
T Consensus       135 ~sK~~~e~~~~~~~~-------~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~  207 (315)
T 2ydy_A          135 KTKLDGEKAVLENNL-------GAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQ  207 (315)
T ss_dssp             HHHHHHHHHHHHHCT-------TCEEEEECSEECSCSSGGGSTTGGGHHHHHCCSSCEEEECSSBBCCEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCC-------CeEEEeeeeeeCCCCcccccHHHHHHHHHHhcCCCeeeccCceECcEEHHHHHHHHHH
Confidence            999999999988743       335677777765543210 01111111111 111     1122577899999999999


Q ss_pred             HhcCC-CCCccccEEEecCceeecc
Q 024145          238 LASDE-SSYVSGQNLVVDGGFSVVN  261 (272)
Q Consensus       238 l~s~~-~~~~~G~~i~~dgG~~~~~  261 (272)
                      ++++. .....|+.+++++|..+..
T Consensus       208 ~~~~~~~~~~~~~~~~i~~~~~~s~  232 (315)
T 2ydy_A          208 LAEKRMLDPSIKGTFHWSGNEQMTK  232 (315)
T ss_dssp             HHHHHHTCTTCCEEEECCCSCCBCH
T ss_pred             HHHhhccccCCCCeEEEcCCCcccH
Confidence            88643 1224689999999876543

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.90  E-value=7.5e-23  Score=176.68  Aligned_cols=216  Identities=16%  Similarity=0.129  Sum_probs=159.4

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEE
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMY   94 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv   94 (272)
                      +|++|||||+|+||++++++|+++|++|++++|++...+  .    .++.++.+|++ .++++++++       ++|+||
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~----~~~~~~~~Dl~-~~~~~~~~~-------~~d~Vi   67 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA--I----NDYEYRVSDYT-LEDLINQLN-------DVDAVV   67 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC-----------CCEEEECCCC-HHHHHHHTT-------TCSEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc--C----CceEEEEcccc-HHHHHHhhc-------CCCEEE
Confidence            368999999999999999999999999999999844332  2    16889999999 888877665       799999


Q ss_pred             eCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccccccc-----------CCCCchh
Q 024145           95 NNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIA-----------GLGSPAY  163 (272)
Q Consensus        95 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~-----------~~~~~~Y  163 (272)
                      |+|+....  .        +..+.+++|+.++..+++++..    .+-.++|++||......           ......|
T Consensus        68 h~a~~~~~--~--------~~~~~~~~n~~~~~~ll~a~~~----~~~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y  133 (311)
T 3m2p_A           68 HLAATRGS--Q--------GKISEFHDNEILTQNLYDACYE----NNISNIVYASTISAYSDETSLPWNEKELPLPDLMY  133 (311)
T ss_dssp             ECCCCCCS--S--------SCGGGTHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGGCCCGGGCSBCTTSCCCCSSHH
T ss_pred             EccccCCC--C--------ChHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCchh
Confidence            99997643  1        3445788999999999998865    34467999999654321           1234689


Q ss_pred             hhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcC-------CCCCCCCChHhHHHHHH
Q 024145          164 TISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMG-------NLKGEFLKTDGIANAAL  236 (272)
Q Consensus       164 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~dva~~~~  236 (272)
                      +.+|.+.+.+++.++.+   .|++++.++|+.+.+|....................       .....+..++|+|++++
T Consensus       134 ~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~  210 (311)
T 3m2p_A          134 GVSKLACEHIGNIYSRK---KGLCIKNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVI  210 (311)
T ss_dssp             HHHHHHHHHHHHHHHHH---SCCEEEEEEECEEECSCC--CCHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHH---cCCCEEEEeeCceeCcCCCCCCHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHH
Confidence            99999999999999887   589999999999998875421111112222221111       11135678899999999


Q ss_pred             HHhcCCCCCccccEEEecCceeeccCcc
Q 024145          237 YLASDESSYVSGQNLVVDGGFSVVNPTV  264 (272)
Q Consensus       237 ~l~s~~~~~~~G~~i~~dgG~~~~~~~~  264 (272)
                      .++....   .|+.|++.+|..++...+
T Consensus       211 ~~~~~~~---~~~~~~i~~~~~~s~~e~  235 (311)
T 3m2p_A          211 YALKQEK---VSGTFNIGSGDALTNYEV  235 (311)
T ss_dssp             HHTTCTT---CCEEEEECCSCEECHHHH
T ss_pred             HHHhcCC---CCCeEEeCCCCcccHHHH
Confidence            9987654   789999999877654433

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.90  E-value=1.8e-23  Score=182.73  Aligned_cols=229  Identities=16%  Similarity=0.078  Sum_probs=157.1

Q ss_pred             ccCCCCCCcEEEEeCCCChHHHHHHHHHHHcC-------CeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHH
Q 024145            8 APFKRLEGKVAIITGGASGIGAMAVELFHENG-------AKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLV   80 (272)
Q Consensus         8 ~~~~~l~~k~vlItGas~giG~aia~~la~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   80 (272)
                      .+...++++++|||||+|+||++++++|+++|       ++|++++|+......   ....++.++.+|++|++++++++
T Consensus         7 ~~~~~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~   83 (342)
T 2hrz_A            7 RENLYFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA---GFSGAVDARAADLSAPGEAEKLV   83 (342)
T ss_dssp             CCCSCCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT---TCCSEEEEEECCTTSTTHHHHHH
T ss_pred             CCCCCccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc---ccCCceeEEEcCCCCHHHHHHHH
Confidence            33456789999999999999999999999999       899999987653321   12457889999999999988776


Q ss_pred             HHHHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCC-CCceEEEEecccccccC-C
Q 024145           81 DTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQ-QKGCILFTASACTEIAG-L  158 (272)
Q Consensus        81 ~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~iss~~~~~~~-~  158 (272)
                      +      +++|+|||+||....       .+.+++.+.+++|+.++..+++++.+...+. ..++||++||.....+. +
T Consensus        84 ~------~~~d~vih~A~~~~~-------~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~  150 (342)
T 2hrz_A           84 E------ARPDVIFHLAAIVSG-------EAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLP  150 (342)
T ss_dssp             H------TCCSEEEECCCCCHH-------HHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCC
T ss_pred             h------cCCCEEEECCccCcc-------cccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCC
Confidence            5      379999999996431       2356788999999999999999987754221 14789999998654432 1


Q ss_pred             ----------CCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEe-------CCcccCCcccCCCCChhHHHHHHhhcC--
Q 024145          159 ----------GSPAYTISKYGILGLVKCLAAELGQYGIRVNCVS-------PYGLATGMSMKGGVDPALIESSMSQMG--  219 (272)
Q Consensus       159 ----------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~-------Pg~v~t~~~~~~~~~~~~~~~~~~~~~--  219 (272)
                                ....|+.||.+.+.+++.++.++   ++....+.       ||...++...   ..............  
T Consensus       151 ~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~ir~~~v~g~pg~~~~~~~~---~~~~~~~~~~~~~~~~  224 (342)
T 2hrz_A          151 YPIPDEFHTTPLTSYGTQKAICELLLSDYSRRG---FFDGIGIRLPTICIRPGKPNAAASG---FFSNILREPLVGQEAV  224 (342)
T ss_dssp             SSBCTTCCCCCSSHHHHHHHHHHHHHHHHHHTT---SCEEEEEEECEETTCCSSCCCSGGG---HHHHHHHHHHTTCCEE
T ss_pred             CCcCCCCCCCCcchHHHHHHHHHHHHHHHHHhc---CCCceeEEeeeEEecCCCCcchhHH---HHHHHHHHHhcCCCee
Confidence                      45689999999999999988763   44444444       5443322111   00111112221111  


Q ss_pred             -CCC----CCCCChHhHHHHHHHHhcCCCC-CccccEEEecCceee
Q 024145          220 -NLK----GEFLKTDGIANAALYLASDESS-YVSGQNLVVDGGFSV  259 (272)
Q Consensus       220 -~~~----~~~~~~~dva~~~~~l~s~~~~-~~~G~~i~~dgG~~~  259 (272)
                       +..    ..+..++|++++++.++..... ...|+.|++. |..+
T Consensus       225 ~~~~~~~~~~~~~v~Dva~~~~~~~~~~~~~~~~~~~~ni~-g~~~  269 (342)
T 2hrz_A          225 LPVPESIRHWHASPRSAVGFLIHGAMIDVEKVGPRRNLSMP-GLSA  269 (342)
T ss_dssp             ECSCTTCEEEEECHHHHHHHHHHHHHSCHHHHCSCCEEECC-CEEE
T ss_pred             ccCCCccceeeEehHHHHHHHHHHHhccccccCCccEEEcC-CCCC
Confidence             110    1256899999999988864321 0136788885 4443

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.90  E-value=1.5e-22  Score=176.41  Aligned_cols=227  Identities=13%  Similarity=0.035  Sum_probs=162.2

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchH-HHHHHHh--CCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLG-EDLADKL--GQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~-~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      .++++|||||+|+||++++++|+++|++|++++|+.... ....+.+  ..++.++.+|++|.++++++++..     ++
T Consensus        13 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~   87 (335)
T 1rpn_A           13 MTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKA-----QP   87 (335)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             cCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHc-----CC
Confidence            568999999999999999999999999999999976542 1122222  246889999999999998888765     68


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccC-----------CC
Q 024145           91 DIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAG-----------LG  159 (272)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~-----------~~  159 (272)
                      |+|||+||....      ..+.+++.+.+++|+.++..+++++.+.-   ..+++|++||.......           ..
T Consensus        88 d~Vih~A~~~~~------~~~~~~~~~~~~~n~~~~~~l~~a~~~~~---~~~~~v~~SS~~v~g~~~~~~~~E~~~~~p  158 (335)
T 1rpn_A           88 QEVYNLAAQSFV------GASWNQPVTTGVVDGLGVTHLLEAIRQFS---PETRFYQASTSEMFGLIQAERQDENTPFYP  158 (335)
T ss_dssp             SEEEECCSCCCH------HHHTTSHHHHHHHHTHHHHHHHHHHHHHC---TTSEEEEEEEGGGGCSCSSSSBCTTSCCCC
T ss_pred             CEEEECccccch------hhhhhChHHHHHHHHHHHHHHHHHHHHhC---CCCeEEEEeCHHHhCCCCCCCCCcccCCCC
Confidence            999999996432      11123567889999999999999887641   13689999997654322           12


Q ss_pred             CchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCC---ChhHHHHHHhhcCC--------CCCCCCCh
Q 024145          160 SPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGV---DPALIESSMSQMGN--------LKGEFLKT  228 (272)
Q Consensus       160 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~---~~~~~~~~~~~~~~--------~~~~~~~~  228 (272)
                      ...|+.+|.+.+.+++.++.++   |+.+..++|+.+.+|.......   .............+        ....+..+
T Consensus       159 ~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v  235 (335)
T 1rpn_A          159 RSPYGVAKLYGHWITVNYRESF---GLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFA  235 (335)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEH
T ss_pred             CChhHHHHHHHHHHHHHHHHHc---CCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEH
Confidence            4589999999999999999875   6888889999888876432110   00111111111111        01246788


Q ss_pred             HhHHHHHHHHhcCCCCCccccEEEecCceeecc
Q 024145          229 DGIANAALYLASDESSYVSGQNLVVDGGFSVVN  261 (272)
Q Consensus       229 ~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~  261 (272)
                      +|+|++++.++....    ++.+++.+|..+..
T Consensus       236 ~Dva~a~~~~~~~~~----~~~~ni~~~~~~s~  264 (335)
T 1rpn_A          236 GDYVEAMWLMLQQDK----ADDYVVATGVTTTV  264 (335)
T ss_dssp             HHHHHHHHHHHHSSS----CCCEEECCSCEEEH
T ss_pred             HHHHHHHHHHHhcCC----CCEEEEeCCCCccH
Confidence            999999999886543    46788888876543

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.90  E-value=2.3e-22  Score=165.40  Aligned_cols=200  Identities=12%  Similarity=0.057  Sum_probs=142.6

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEeC
Q 024145           17 VAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNN   96 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~   96 (272)
                      ++|||||+|+||++++++|+++|++|++++|+++..+.+   ...++.++.+|++|+++         +.++++|+|||+
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~~~~~~~D~~d~~~---------~~~~~~d~vi~~   69 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADR---LGATVATLVKEPLVLTE---------ADLDSVDAVVDA   69 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---TCTTSEEEECCGGGCCH---------HHHTTCSEEEEC
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccc---cCCCceEEecccccccH---------hhcccCCEEEEC
Confidence            599999999999999999999999999999987765433   34578999999999887         223479999999


Q ss_pred             CCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCC--------------Cch
Q 024145           97 AGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLG--------------SPA  162 (272)
Q Consensus        97 ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~--------------~~~  162 (272)
                      +|....  ..           ..++|+.++..    +++.+.+.+ +++|++||..+..+.+.              ...
T Consensus        70 ag~~~~--~~-----------~~~~n~~~~~~----l~~a~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (224)
T 3h2s_A           70 LSVPWG--SG-----------RGYLHLDFATH----LVSLLRNSD-TLAVFILGSASLAMPGADHPMILDFPESAASQPW  131 (224)
T ss_dssp             CCCCTT--SS-----------CTHHHHHHHHH----HHHTCTTCC-CEEEEECCGGGSBCTTCSSCGGGGCCGGGGGSTT
T ss_pred             CccCCC--cc-----------hhhHHHHHHHH----HHHHHHHcC-CcEEEEecceeeccCCCCccccccCCCCCccchh
Confidence            997521  00           02457766644    555566666 99999999876654443              568


Q ss_pred             hhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCC
Q 024145          163 YTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDE  242 (272)
Q Consensus       163 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  242 (272)
                      |+.+|.+.+.+ +.   .....|++++.++||++.++.....   .......+. .......+.+++|+|++++.++..+
T Consensus       132 y~~sK~~~e~~-~~---~~~~~~i~~~ivrp~~v~g~~~~~~---~~~~~~~~~-~~~~~~~~i~~~DvA~~~~~~l~~~  203 (224)
T 3h2s_A          132 YDGALYQYYEY-QF---LQMNANVNWIGISPSEAFPSGPATS---YVAGKDTLL-VGEDGQSHITTGNMALAILDQLEHP  203 (224)
T ss_dssp             HHHHHHHHHHH-HH---HTTCTTSCEEEEEECSBCCCCCCCC---EEEESSBCC-CCTTSCCBCCHHHHHHHHHHHHHSC
T ss_pred             hHHHHHHHHHH-HH---HHhcCCCcEEEEcCccccCCCcccC---ceecccccc-cCCCCCceEeHHHHHHHHHHHhcCc
Confidence            99999998854 22   2235799999999999998843211   000000000 0111256789999999999999765


Q ss_pred             CCCccccEEEecCc
Q 024145          243 SSYVSGQNLVVDGG  256 (272)
Q Consensus       243 ~~~~~G~~i~~dgG  256 (272)
                      .  ..|+.|.+.+=
T Consensus       204 ~--~~g~~~~~~~~  215 (224)
T 3h2s_A          204 T--AIRDRIVVRDA  215 (224)
T ss_dssp             C--CTTSEEEEEEC
T ss_pred             c--ccCCEEEEecC
Confidence            4  36888887653

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.90  E-value=1e-22  Score=175.52  Aligned_cols=220  Identities=15%  Similarity=0.147  Sum_probs=160.0

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHc--CCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Q 024145           15 GKVAIITGGASGIGAMAVELFHEN--GAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDI   92 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   92 (272)
                      +|++|||||+|+||++++++|+++  |++|++++|+....+ ..    .++.++.+|++|.+++++++++.     ++|+
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~~----~~~~~~~~D~~d~~~~~~~~~~~-----~~d~   71 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-VV----NSGPFEVVNALDFNQIEHLVEVH-----KITD   71 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-HH----HSSCEEECCTTCHHHHHHHHHHT-----TCCE
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-cc----CCCceEEecCCCHHHHHHHHhhc-----CCCE
Confidence            468999999999999999999999  899999998766532 21    24678999999999988877643     6999


Q ss_pred             EEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccC------------CCC
Q 024145           93 MYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAG------------LGS  160 (272)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~------------~~~  160 (272)
                      |||+||....       ...+++.+.+++|+.++..+++++.+    .+.+++|++||.......            ...
T Consensus        72 vih~a~~~~~-------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~  140 (312)
T 2yy7_A           72 IYLMAALLSA-------TAEKNPAFAWDLNMNSLFHVLNLAKA----KKIKKIFWPSSIAVFGPTTPKENTPQYTIMEPS  140 (312)
T ss_dssp             EEECCCCCHH-------HHHHCHHHHHHHHHHHHHHHHHHHHT----TSCSEEECCEEGGGCCTTSCSSSBCSSCBCCCC
T ss_pred             EEECCccCCC-------chhhChHHHHHHHHHHHHHHHHHHHH----cCCCEEEEeccHHHhCCCCCCCCccccCcCCCC
Confidence            9999996432       12356788999999999999998865    344689999998654321            235


Q ss_pred             chhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCC----hhHHHHHHhhc-C------CCCCCCCChH
Q 024145          161 PAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVD----PALIESSMSQM-G------NLKGEFLKTD  229 (272)
Q Consensus       161 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~----~~~~~~~~~~~-~------~~~~~~~~~~  229 (272)
                      ..|+.+|.+.+.+++.++.++   |+++++++|+.+.++........    ...+....... .      .....+..++
T Consensus       141 ~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  217 (312)
T 2yy7_A          141 TVYGISKQAGERWCEYYHNIY---GVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMD  217 (312)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHH---CCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCCEEEEEHH
T ss_pred             chhHHHHHHHHHHHHHHHHhc---CCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCceeeeeeHH
Confidence            689999999999999998874   79999999999998754321111    11111111111 0      0113457789


Q ss_pred             hHHHHHHHHhcCCCCCc-cccEEEecCceee
Q 024145          230 GIANAALYLASDESSYV-SGQNLVVDGGFSV  259 (272)
Q Consensus       230 dva~~~~~l~s~~~~~~-~G~~i~~dgG~~~  259 (272)
                      |+|++++.++....... .|+.|++.+ ..+
T Consensus       218 Dva~a~~~~~~~~~~~~~~~~~~ni~~-~~~  247 (312)
T 2yy7_A          218 DAIDATINIMKAPVEKIKIHSSYNLAA-MSF  247 (312)
T ss_dssp             HHHHHHHHHHHSCGGGCCCSSCEECCS-EEE
T ss_pred             HHHHHHHHHHhCcccccccCceEEeCC-Ccc
Confidence            99999999886543322 258899875 444

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.89  E-value=3.7e-23  Score=217.61  Aligned_cols=175  Identities=15%  Similarity=0.162  Sum_probs=139.0

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCe-EEEeecCcchH---HHHHHH---hCCceEEEEecCCCHHHHHHHHHHHHHH
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAK-VVIADVQDKLG---EDLADK---LGQDVCYIHCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~-V~~~~r~~~~~---~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (272)
                      .+|++|||||++|||++++++|+++|++ |++++|+....   ++..++   .+.++.++.||++|.++++++++++. +
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~-~ 1961 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEAT-Q 1961 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHH-H
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHH-h
Confidence            6899999999999999999999999997 88889886543   223333   36678999999999999999999987 4


Q ss_pred             hCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhh
Q 024145           87 FGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTIS  166 (272)
Q Consensus        87 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~s  166 (272)
                      +|++|+||||||+...  .++.+.+.++|++++++|+.|++++.+.+.+.|.+  .|+||++||..+..+.+++..|++|
T Consensus      1962 ~g~id~lVnnAgv~~~--~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~--~g~iV~iSS~ag~~g~~g~~~Y~aa 2037 (2512)
T 2vz8_A         1962 LGPVGGVFNLAMVLRD--AVLENQTPEFFQDVSKPKYSGTANLDRVTREACPE--LDYFVIFSSVSCGRGNAGQANYGFA 2037 (2512)
T ss_dssp             HSCEEEEEECCCC------------------CTTTTHHHHHHHHHHHHHHCTT--CCEEEEECCHHHHTTCTTCHHHHHH
T ss_pred             cCCCcEEEECCCcCCC--CchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhccc--CCEEEEecchhhcCCCCCcHHHHHH
Confidence            7899999999998765  67889999999999999999999999999998854  3899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEEeCCccc
Q 024145          167 KYGILGLVKCLAAELGQYGIRVNCVSPYGLA  197 (272)
Q Consensus       167 K~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~  197 (272)
                      |+++++|++....+    |+...++..|...
T Consensus      2038 Kaal~~l~~~rr~~----Gl~~~a~~~g~~~ 2064 (2512)
T 2vz8_A         2038 NSAMERICEKRRHD----GLPGLAVQWGAIG 2064 (2512)
T ss_dssp             HHHHHHHHHHHHHT----TSCCCEEEECCBC
T ss_pred             HHHHHHHHHHHHHC----CCcEEEEEccCcC
Confidence            99999999987765    7777888887654

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.89  E-value=1.4e-23  Score=183.18  Aligned_cols=217  Identities=18%  Similarity=0.149  Sum_probs=147.4

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHH--HHHHh--CCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGED--LADKL--GQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~--~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      +|++|||||+|+||++++++|+++|++|+++.|+.+..+.  ....+  ..++.++.+|++|+++++++++       ++
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   81 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIA-------GC   81 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHT-------TC
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHHc-------CC
Confidence            6899999999999999999999999999988887653211  11122  2468899999999988877665       68


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccccccc---C----------
Q 024145           91 DIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIA---G----------  157 (272)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~---~----------  157 (272)
                      |+|||+|+....     .  ..+..++.+++|+.+++++++++.+..   +-++||++||..+..+   .          
T Consensus        82 D~Vih~A~~~~~-----~--~~~~~~~~~~~nv~gt~~ll~aa~~~~---~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~  151 (338)
T 2rh8_A           82 DFVFHVATPVHF-----A--SEDPENDMIKPAIQGVVNVMKACTRAK---SVKRVILTSSAAAVTINQLDGTGLVVDEKN  151 (338)
T ss_dssp             SEEEEESSCCCC----------------CHHHHHHHHHHHHHHHHCT---TCCEEEEECCHHHHHHHHHTCSCCCCCTTT
T ss_pred             CEEEEeCCccCC-----C--CCCcHHHHHHHHHHHHHHHHHHHHHcC---CcCEEEEEecHHHeecCCcCCCCcccChhh
Confidence            999999985321     1  112224589999999999999988743   2468999999763211   0          


Q ss_pred             --------C---CCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHH---Hhhc----C
Q 024145          158 --------L---GSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESS---MSQM----G  219 (272)
Q Consensus       158 --------~---~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~---~~~~----~  219 (272)
                              +   ....|+.||.+.+.+++.++.+   +|+++++++|+.+.+|.....  .+......   ....    .
T Consensus       152 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~~lrp~~v~Gp~~~~~--~~~~~~~~~~~~~g~~~~~~  226 (338)
T 2rh8_A          152 WTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEE---NNIDLITVIPTLMAGSSLTSD--VPSSIGLAMSLITGNEFLIN  226 (338)
T ss_dssp             TTCC-------CCCCCCTTSCCHHHHHHHHHHHH---HTCCEEEEEECEEESCCSSSS--CCHHHHHHHHHHHTCHHHHH
T ss_pred             ccchhhccccCCccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCceECCCCCCC--CCchHHHHHHHHcCCccccc
Confidence                    0   0115999999999999888766   489999999999999975431  11111100   0000    0


Q ss_pred             -------CC-CCCCCChHhHHHHHHHHhcCCCCCccccEEEecCc
Q 024145          220 -------NL-KGEFLKTDGIANAALYLASDESSYVSGQNLVVDGG  256 (272)
Q Consensus       220 -------~~-~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG  256 (272)
                             .. ...+..++|+|++++++++...  ..|. +.+.++
T Consensus       227 ~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~--~~~~-~~~~~~  268 (338)
T 2rh8_A          227 GMKGMQMLSGSVSIAHVEDVCRAHIFVAEKES--ASGR-YICCAA  268 (338)
T ss_dssp             HHHHHHHHHSSEEEEEHHHHHHHHHHHHHCTT--CCEE-EEECSE
T ss_pred             cccccccccCcccEEEHHHHHHHHHHHHcCCC--cCCc-EEEecC
Confidence                   00 0157899999999999886532  2455 444443

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.89  E-value=3.7e-22  Score=163.60  Aligned_cols=204  Identities=14%  Similarity=0.084  Sum_probs=134.7

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEeC
Q 024145           17 VAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNN   96 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~   96 (272)
                      ++|||||+|+||++++++|+++|++|++++|+++..+.+.    .++.++.+|++|+++         +.+.++|+|||+
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~----~~~~~~~~D~~d~~~---------~~~~~~d~vi~~   68 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH----KDINILQKDIFDLTL---------SDLSDQNVVVDA   68 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC----SSSEEEECCGGGCCH---------HHHTTCSEEEEC
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc----CCCeEEeccccChhh---------hhhcCCCEEEEC
Confidence            6999999999999999999999999999999877654432    578999999999887         223479999999


Q ss_pred             CCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCC------------CCchhh
Q 024145           97 AGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGL------------GSPAYT  164 (272)
Q Consensus        97 ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~------------~~~~Y~  164 (272)
                      +|....               ..+.|+.++..    +++.+.+.+.+++|++||..+..+.+            ....|+
T Consensus        69 ag~~~~---------------~~~~~~~~~~~----l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~  129 (221)
T 3ew7_A           69 YGISPD---------------EAEKHVTSLDH----LISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYP  129 (221)
T ss_dssp             CCSSTT---------------TTTSHHHHHHH----HHHHHCSCCSSEEEEECCCC-------------------CCCSC
T ss_pred             CcCCcc---------------ccchHHHHHHH----HHHHHHhcCCceEEEEecceEEEcCCCCccccccCCCCCHHHHH
Confidence            997421               02335555544    45555666678999999987755433            235699


Q ss_pred             hhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCC
Q 024145          165 ISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESS  244 (272)
Q Consensus       165 ~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  244 (272)
                      .+|.+.+.+. .+..  ...|++++.++||++.++.......  ....+...... ....+.+++|+|++++.++.... 
T Consensus       130 ~~k~~~e~~~-~~~~--~~~gi~~~ivrp~~v~g~~~~~~~~--~~~~~~~~~~~-~~~~~i~~~Dva~~~~~~l~~~~-  202 (221)
T 3ew7_A          130 TARAQAKQLE-HLKS--HQAEFSWTYISPSAMFEPGERTGDY--QIGKDHLLFGS-DGNSFISMEDYAIAVLDEIERPN-  202 (221)
T ss_dssp             CHHHHHHHHH-HHHT--TTTTSCEEEEECSSCCCCC------------------------CCCHHHHHHHHHHHHHSCS-
T ss_pred             HHHHHHHHHH-HHHh--hccCccEEEEeCcceecCCCccCce--EeccccceecC-CCCceEeHHHHHHHHHHHHhCcc-
Confidence            9999998863 2222  1478999999999999873221100  00000000001 11357889999999999997654 


Q ss_pred             CccccEEEecCceeec
Q 024145          245 YVSGQNLVVDGGFSVV  260 (272)
Q Consensus       245 ~~~G~~i~~dgG~~~~  260 (272)
                       ..|+.|++.+-...+
T Consensus       203 -~~g~~~~~~~~~~~~  217 (221)
T 3ew7_A          203 -HLNEHFTVAGKLEHH  217 (221)
T ss_dssp             -CTTSEEECCC-----
T ss_pred             -ccCCEEEECCCCccc
Confidence             368999988765543

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.89  E-value=2.7e-22  Score=190.14  Aligned_cols=222  Identities=13%  Similarity=0.078  Sum_probs=162.7

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHc-CCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHH-HHHHHHHHHHHhCCc
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHEN-GAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDE-VINLVDTAVSKFGKL   90 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~~g~i   90 (272)
                      +++|++|||||+|+||++++++|+++ |++|++++|+....+.+.+  ..++.++.+|+++.++ ++++++       ++
T Consensus       313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~~--~~~v~~v~~Dl~d~~~~~~~~~~-------~~  383 (660)
T 1z7e_A          313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLN--HPHFHFVEGDISIHSEWIEYHVK-------KC  383 (660)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGTT--CTTEEEEECCTTTCHHHHHHHHH-------HC
T ss_pred             ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhcc--CCceEEEECCCCCcHHHHHHhhc-------CC
Confidence            57899999999999999999999998 8999999998765432211  3478899999998765 555544       58


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCC------------
Q 024145           91 DIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGL------------  158 (272)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~------------  158 (272)
                      |+|||+||.....      ...+++.+.+++|+.++..+++++.+.    + +++|++||........            
T Consensus       384 D~Vih~Aa~~~~~------~~~~~~~~~~~~Nv~gt~~ll~aa~~~----~-~r~V~~SS~~vyg~~~~~~~~E~~~~~~  452 (660)
T 1z7e_A          384 DVVLPLVAIATPI------EYTRNPLRVFELDFEENLRIIRYCVKY----R-KRIIFPSTSEVYGMCSDKYFDEDHSNLI  452 (660)
T ss_dssp             SEEEECCCCCCTH------HHHHSHHHHHHHHTHHHHHHHHHHHHT----T-CEEEEECCGGGGBTCCSSSBCTTTCCEE
T ss_pred             CEEEECceecCcc------ccccCHHHHHHhhhHHHHHHHHHHHHh----C-CEEEEEecHHHcCCCCCcccCCCccccc
Confidence            9999999975320      123456789999999999999988762    3 7899999976542211            


Q ss_pred             ------CCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccC--------CCCChhHHHHHHhhcCC----
Q 024145          159 ------GSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMK--------GGVDPALIESSMSQMGN----  220 (272)
Q Consensus       159 ------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~--------~~~~~~~~~~~~~~~~~----  220 (272)
                            ....|+.||.+.+.+++.++.++   |+++++++||.+.++....        .................    
T Consensus       453 ~~p~~~p~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g  529 (660)
T 1z7e_A          453 VGPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLID  529 (660)
T ss_dssp             ECCTTCTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEG
T ss_pred             cCcccCCCCCcHHHHHHHHHHHHHHHHHc---CCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeC
Confidence                  12269999999999999998874   7999999999999887531        00011122222222110    


Q ss_pred             ---CCCCCCChHhHHHHHHHHhcCCCCCccccEEEecCce
Q 024145          221 ---LKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGF  257 (272)
Q Consensus       221 ---~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~  257 (272)
                         ....+++++|+|+++++++.......+|++|++++|.
T Consensus       530 ~g~~~~~~i~v~Dva~ai~~~l~~~~~~~~g~~~ni~~~~  569 (660)
T 1z7e_A          530 GGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPE  569 (660)
T ss_dssp             GGCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCGG
T ss_pred             CCCeEEEEEEHHHHHHHHHHHHhCccccCCCeEEEECCCC
Confidence               1134788999999999998765444679999999985

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.89  E-value=7.9e-22  Score=172.04  Aligned_cols=227  Identities=14%  Similarity=0.128  Sum_probs=155.6

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcc----hHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Q 024145           17 VAIITGGASGIGAMAVELFHENGAKVVIADVQDK----LGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDI   92 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   92 (272)
                      ++|||||+|+||++++++|+++|++|++++|...    ..+.+.+..+.++.++.+|++|+++++++++..     ++|+
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~D~   76 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDH-----AIDT   76 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHT-----TCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhcc-----CCCE
Confidence            6899999999999999999999999999876432    122222222456889999999999988877642     6999


Q ss_pred             EEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccccccc-----------C-CCC
Q 024145           93 MYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIA-----------G-LGS  160 (272)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~-----------~-~~~  160 (272)
                      |||+||....  .    ...++..+.+++|+.+++.+++++..    .+.++||++||......           . +..
T Consensus        77 vih~A~~~~~--~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~  146 (338)
T 1udb_A           77 VIHFAGLKAV--G----ESVQKPLEYYDNNVNGTLRLISAMRA----ANVKNFIFSSSATVYGDNPKIPYVESFPTGTPQ  146 (338)
T ss_dssp             EEECCSCCCH--H----HHHHCHHHHHHHHHHHHHHHHHHHHH----HTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCS
T ss_pred             EEECCccCcc--c----cchhcHHHHHHHHHHHHHHHHHHHHh----cCCCeEEEEccHHHhCCCCCCCcCcccCCCCCC
Confidence            9999996432  1    12345677899999999999987654    24568999999765321           1 235


Q ss_pred             chhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCccc----CCC----CC-hhHHHHHHhhcCC-----------
Q 024145          161 PAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSM----KGG----VD-PALIESSMSQMGN-----------  220 (272)
Q Consensus       161 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~----~~~----~~-~~~~~~~~~~~~~-----------  220 (272)
                      ..|+.||++++.+++.++.++  .|+++..++|+.+..+...    ...    .. .............           
T Consensus       147 ~~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  224 (338)
T 1udb_A          147 SPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPT  224 (338)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHS--TTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSS
T ss_pred             ChHHHHHHHHHHHHHHHHHhc--CCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccC
Confidence            689999999999999999884  3799999999877665211    000    00 1111111110000           


Q ss_pred             ----CCCCCCChHhHHHHHHHHhcCCCCCccccEEEecCceeec
Q 024145          221 ----LKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       221 ----~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~  260 (272)
                          ....+..++|+|++++.++........++.|++.+|..++
T Consensus       225 ~~g~~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~yni~~~~~~s  268 (338)
T 1udb_A          225 EDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNS  268 (338)
T ss_dssp             SSSSCEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSCCEE
T ss_pred             CCCceeeeeEEHHHHHHHHHHHHhhhhccCCCcEEEecCCCcee
Confidence                0125678899999998877532111134788988776543

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.88  E-value=1.7e-22  Score=172.85  Aligned_cols=199  Identities=18%  Similarity=0.117  Sum_probs=149.5

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      ..+++|||||+|+||++++++|+++|++|++++|+                  .+|++|.++++++++..     ++|+|
T Consensus        11 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~------------------~~Dl~d~~~~~~~~~~~-----~~d~v   67 (292)
T 1vl0_A           11 HHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ------------------DLDITNVLAVNKFFNEK-----KPNVV   67 (292)
T ss_dssp             -CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT------------------TCCTTCHHHHHHHHHHH-----CCSEE
T ss_pred             ccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc------------------cCCCCCHHHHHHHHHhc-----CCCEE
Confidence            45899999999999999999999999999999986                  27999999998877754     69999


Q ss_pred             EeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCC-----------CCch
Q 024145           94 YNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGL-----------GSPA  162 (272)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~-----------~~~~  162 (272)
                      ||+||....      +.+.+++++.+++|+.++..+++++.+.    + .++|++||.....+..           ....
T Consensus        68 ih~A~~~~~------~~~~~~~~~~~~~nv~~~~~l~~a~~~~----~-~~iv~~SS~~v~~~~~~~~~~E~~~~~~~~~  136 (292)
T 1vl0_A           68 INCAAHTAV------DKCEEQYDLAYKINAIGPKNLAAAAYSV----G-AEIVQISTDYVFDGEAKEPITEFDEVNPQSA  136 (292)
T ss_dssp             EECCCCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHHH----T-CEEEEEEEGGGSCSCCSSCBCTTSCCCCCSH
T ss_pred             EECCccCCH------HHHhcCHHHHHHHHHHHHHHHHHHHHHc----C-CeEEEechHHeECCCCCCCCCCCCCCCCccH
Confidence            999996432      1234678899999999999999998763    2 3899999986543322           3568


Q ss_pred             hhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhc-----CCCCCCCCChHhHHHHHHH
Q 024145          163 YTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQM-----GNLKGEFLKTDGIANAALY  237 (272)
Q Consensus       163 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~dva~~~~~  237 (272)
                      |+.+|.+.+.+++.++.       .+..++|+.+.++ .. . .............     ......+..++|+|+++++
T Consensus       137 Y~~sK~~~E~~~~~~~~-------~~~~lR~~~v~G~-~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  206 (292)
T 1vl0_A          137 YGKTKLEGENFVKALNP-------KYYIVRTAWLYGD-GN-N-FVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLK  206 (292)
T ss_dssp             HHHHHHHHHHHHHHHCS-------SEEEEEECSEESS-SS-C-HHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhCC-------CeEEEeeeeeeCC-Cc-C-hHHHHHHHHhcCCcEEeecCeeeCCccHHHHHHHHHH
Confidence            99999999999988643       3688999999877 21 0 1111111111111     1112567889999999999


Q ss_pred             HhcCCCCCccccEEEecCceeec
Q 024145          238 LASDESSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       238 l~s~~~~~~~G~~i~~dgG~~~~  260 (272)
                      +++..    .|+.|++++|..+.
T Consensus       207 ~~~~~----~~~~~~i~~~~~~s  225 (292)
T 1vl0_A          207 VIDEK----NYGTFHCTCKGICS  225 (292)
T ss_dssp             HHHHT----CCEEEECCCBSCEE
T ss_pred             HHhcC----CCcEEEecCCCCcc
Confidence            98764    68999999986554

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.88  E-value=5.4e-22  Score=171.82  Aligned_cols=213  Identities=16%  Similarity=0.166  Sum_probs=155.5

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      .++++|||||+|+||++++++|+++|++|+++.|+.                 .+|++|.++++++++..     ++|+|
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~-----------------~~D~~d~~~~~~~~~~~-----~~d~v   59 (321)
T 1e6u_A            2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD-----------------ELNLLDSRAVHDFFASE-----RIDQV   59 (321)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT-----------------TCCTTCHHHHHHHHHHH-----CCSEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc-----------------cCCccCHHHHHHHHHhc-----CCCEE
Confidence            468999999999999999999999999999888753                 26999999988877654     69999


Q ss_pred             EeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccC-------------CC-
Q 024145           94 YNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAG-------------LG-  159 (272)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~-------------~~-  159 (272)
                      ||+||....     .....++..+.+++|+.++..+++++...    +.+++|++||.......             +. 
T Consensus        60 ih~a~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~  130 (321)
T 1e6u_A           60 YLAAAKVGG-----IVANNTYPADFIYQNMMIESNIIHAAHQN----DVNKLLFLGSSCIYPKLAKQPMAESELLQGTLE  130 (321)
T ss_dssp             EECCCCCCC-----HHHHHHCHHHHHHHHHHHHHHHHHHHHHT----TCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCC
T ss_pred             EEcCeecCC-----cchhhhCHHHHHHHHHHHHHHHHHHHHHh----CCCeEEEEccHHHcCCCCCCCcCccccccCCCC
Confidence            999986431     11124456788999999999999988762    34689999997654211             11 


Q ss_pred             --CchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCC--C--hhHHHHHHhh------cC------CC
Q 024145          160 --SPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGV--D--PALIESSMSQ------MG------NL  221 (272)
Q Consensus       160 --~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~--~--~~~~~~~~~~------~~------~~  221 (272)
                        ...|+.+|.+.+.+++.++.++   |+++++++|+++.+|.......  .  +.........      ..      ..
T Consensus       131 p~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~  207 (321)
T 1e6u_A          131 PTNEPYAIAKIAGIKLCESYNRQY---GRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTP  207 (321)
T ss_dssp             GGGHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCC
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCE
Confidence              2489999999999999998874   7999999999999886542110  1  1122222210      11      01


Q ss_pred             CCCCCChHhHHHHHHHHhcCCCC------CccccEEEecCceeec
Q 024145          222 KGEFLKTDGIANAALYLASDESS------YVSGQNLVVDGGFSVV  260 (272)
Q Consensus       222 ~~~~~~~~dva~~~~~l~s~~~~------~~~G~~i~~dgG~~~~  260 (272)
                      ...+..++|+|++++.++.....      ...|+.|++.+|..+.
T Consensus       208 ~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~~s  252 (321)
T 1e6u_A          208 MREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCT  252 (321)
T ss_dssp             EECEEEHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEE
T ss_pred             EEEeEEHHHHHHHHHHHHhCcccccccccccCCceEEeCCCCCcc
Confidence            13567899999999998865421      1237889998876554

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.88  E-value=3e-22  Score=175.21  Aligned_cols=221  Identities=14%  Similarity=0.098  Sum_probs=154.7

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh--CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL--GQDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      +..++++++|||||+|+||++++++|+++|++|++++|+........+.+  ..++.++.+|+.+..            +
T Consensus        22 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~   89 (343)
T 2b69_A           22 HMEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL------------Y   89 (343)
T ss_dssp             -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCC------------C
T ss_pred             ccccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhccCCceEEEeCccCChh------------h
Confidence            45578899999999999999999999999999999998654221111111  246889999998752            3


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccc------------
Q 024145           88 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEI------------  155 (272)
Q Consensus        88 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~------------  155 (272)
                      .++|+|||+||.....  .    ..+++.+.+++|+.++..+++++.+.    + .++|++||.....            
T Consensus        90 ~~~d~vih~A~~~~~~--~----~~~~~~~~~~~n~~~~~~l~~a~~~~----~-~~~v~~SS~~v~g~~~~~~~~E~~~  158 (343)
T 2b69_A           90 IEVDQIYHLASPASPP--N----YMYNPIKTLKTNTIGTLNMLGLAKRV----G-ARLLLASTSEVYGDPEVHPQSEDYW  158 (343)
T ss_dssp             CCCSEEEECCSCCSHH--H----HTTCHHHHHHHHHHHHHHHHHHHHHH----T-CEEEEEEEGGGGBSCSSSSBCTTCC
T ss_pred             cCCCEEEECccccCch--h----hhhCHHHHHHHHHHHHHHHHHHHHHh----C-CcEEEECcHHHhCCCCCCCCccccc
Confidence            5799999999965421  0    11245678999999999999988763    2 3899999976432            


Q ss_pred             ----cCCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCC--hhHHHHHHhhcCC-------CC
Q 024145          156 ----AGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVD--PALIESSMSQMGN-------LK  222 (272)
Q Consensus       156 ----~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~~-------~~  222 (272)
                          +......|+.+|.+.+.+++.++.++   |+++++++|+.+.+|........  .............       ..
T Consensus       159 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (343)
T 2b69_A          159 GHVNPIGPRACYDEGKRVAETMCYAYMKQE---GVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQT  235 (343)
T ss_dssp             CBCCSSSTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCE
T ss_pred             ccCCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeE
Confidence                12234579999999999999998874   89999999999999865421111  1122222221110       11


Q ss_pred             CCCCChHhHHHHHHHHhcCCCCCccccEEEecCceeec
Q 024145          223 GEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       223 ~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~  260 (272)
                      ..+..++|+|++++.++...    .|+.+++.+|..+.
T Consensus       236 ~~~v~v~Dva~a~~~~~~~~----~~~~~~i~~~~~~s  269 (343)
T 2b69_A          236 RAFQYVSDLVNGLVALMNSN----VSSPVNLGNPEEHT  269 (343)
T ss_dssp             EECEEHHHHHHHHHHHHTSS----CCSCEEESCCCEEE
T ss_pred             EeeEeHHHHHHHHHHHHhcC----CCCeEEecCCCCCc
Confidence            34678999999999988654    26788998887654

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.88  E-value=9.9e-24  Score=172.38  Aligned_cols=200  Identities=14%  Similarity=0.026  Sum_probs=149.1

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC--eEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGA--KVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   91 (272)
                      .+|++|||||+|+||++++++|+++|+  +|++++|++..       ...++.++.+|+++++++++++         +|
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~-------~~~~~~~~~~D~~~~~~~~~~~---------~d   67 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA-------EHPRLDNPVGPLAELLPQLDGS---------ID   67 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC-------CCTTEECCBSCHHHHGGGCCSC---------CS
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc-------cCCCceEEeccccCHHHHHHhh---------hc
Confidence            468999999999999999999999998  99999998764       1346788889998887765443         89


Q ss_pred             EEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHHH
Q 024145           92 IMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGIL  171 (272)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~  171 (272)
                      +|||++|....        +.+++++.+++|+.++..+++++.+    .+.+++|++||......  ....|+.+|.+++
T Consensus        68 ~vi~~a~~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~--~~~~y~~sK~~~e  133 (215)
T 2a35_A           68 TAFCCLGTTIK--------EAGSEEAFRAVDFDLPLAVGKRALE----MGARHYLVVSALGADAK--SSIFYNRVKGELE  133 (215)
T ss_dssp             EEEECCCCCHH--------HHSSHHHHHHHHTHHHHHHHHHHHH----TTCCEEEEECCTTCCTT--CSSHHHHHHHHHH
T ss_pred             EEEECeeeccc--------cCCCHHHHHHhhHHHHHHHHHHHHH----cCCCEEEEECCcccCCC--CccHHHHHHHHHH
Confidence            99999996432        1345778899999999999998765    34568999999876542  3568999999999


Q ss_pred             HHHHHHHHHhcCCCcE-EEEEeCCcccCCcccCCCCChhHHHHHHhhcCCC---CCCCCChHhHHHHHHHHhcCCCCCcc
Q 024145          172 GLVKCLAAELGQYGIR-VNCVSPYGLATGMSMKGGVDPALIESSMSQMGNL---KGEFLKTDGIANAALYLASDESSYVS  247 (272)
Q Consensus       172 ~~~~~la~e~~~~gi~-v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~dva~~~~~l~s~~~~~~~  247 (272)
                      .+++.       .|++ ++.++||++.++....     ...........+.   ...+.+++|+|++++.++....    
T Consensus       134 ~~~~~-------~~~~~~~~vrp~~v~g~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~----  197 (215)
T 2a35_A          134 QALQE-------QGWPQLTIARPSLLFGPREEF-----RLAEILAAPIARILPGKYHGIEACDLARALWRLALEEG----  197 (215)
T ss_dssp             HHHTT-------SCCSEEEEEECCSEESTTSCE-----EGGGGTTCCCC----CHHHHHHHHHHHHHHHHHHTCCC----
T ss_pred             HHHHH-------cCCCeEEEEeCceeeCCCCcc-----hHHHHHHHhhhhccCCCcCcEeHHHHHHHHHHHHhcCC----
Confidence            98764       3898 9999999999886431     0000100000110   1245678999999999987653    


Q ss_pred             ccEEEecCceee
Q 024145          248 GQNLVVDGGFSV  259 (272)
Q Consensus       248 G~~i~~dgG~~~  259 (272)
                      ++.+++.++..+
T Consensus       198 ~~~~~i~~~~~~  209 (215)
T 2a35_A          198 KGVRFVESDELR  209 (215)
T ss_dssp             SEEEEEEHHHHH
T ss_pred             CCceEEcHHHHH
Confidence            678888776543

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.88  E-value=1.2e-21  Score=169.22  Aligned_cols=213  Identities=16%  Similarity=0.191  Sum_probs=153.4

Q ss_pred             EEEEeCCCChHHHHHHHHHHHc--CCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEE
Q 024145           17 VAIITGGASGIGAMAVELFHEN--GAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMY   94 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv   94 (272)
                      ++|||||+|+||++++++|+++  |++|++++|+....+        .+.++.+|++|+++++++++..     ++|+||
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--------~~~~~~~D~~d~~~~~~~~~~~-----~~d~vi   67 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG--------GIKFITLDVSNRDEIDRAVEKY-----SIDAIF   67 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT--------TCCEEECCTTCHHHHHHHHHHT-----TCCEEE
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc--------CceEEEecCCCHHHHHHHHhhc-----CCcEEE
Confidence            4899999999999999999999  899999988765421        4678899999999988877642     699999


Q ss_pred             eCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccC------------CCCch
Q 024145           95 NNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAG------------LGSPA  162 (272)
Q Consensus        95 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~------------~~~~~  162 (272)
                      |+||....       ...+++.+.+++|+.++..+++++.+    .+.+++|++||.....+.            .....
T Consensus        68 h~a~~~~~-------~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~~~  136 (317)
T 3ajr_A           68 HLAGILSA-------KGEKDPALAYKVNMNGTYNILEAAKQ----HRVEKVVIPSTIGVFGPETPKNKVPSITITRPRTM  136 (317)
T ss_dssp             ECCCCCHH-------HHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGGCCTTSCSSSBCSSSCCCCCSH
T ss_pred             ECCcccCC-------ccccChHHHhhhhhHHHHHHHHHHHH----cCCCEEEEecCHHHhCCCCCCCCccccccCCCCch
Confidence            99996432       12356788999999999999998875    345689999998765432            13568


Q ss_pred             hhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChh----HHHHHHhhcC-------CCCCCCCChHhH
Q 024145          163 YTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPA----LIESSMSQMG-------NLKGEFLKTDGI  231 (272)
Q Consensus       163 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~----~~~~~~~~~~-------~~~~~~~~~~dv  231 (272)
                      |+.||.+.+.+++.++.+   .|+++++++|+.+..+..........    ...+......       .....+...+|+
T Consensus       137 Y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv  213 (317)
T 3ajr_A          137 FGVTKIAAELLGQYYYEK---FGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDA  213 (317)
T ss_dssp             HHHHHHHHHHHHHHHHHH---HCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHH
T ss_pred             HHHHHHHHHHHHHHHHHh---cCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHHHH
Confidence            999999999999999877   47999999977666543221111111    1111111110       011245678999


Q ss_pred             HHHHHHHhcCCC-CCccccEEEecCc
Q 024145          232 ANAALYLASDES-SYVSGQNLVVDGG  256 (272)
Q Consensus       232 a~~~~~l~s~~~-~~~~G~~i~~dgG  256 (272)
                      +++++.++.... ...+|+.|++.|+
T Consensus       214 a~a~~~~l~~~~~~~~~g~~~~i~~~  239 (317)
T 3ajr_A          214 LKALVDLYEADRDKLVLRNGYNVTAY  239 (317)
T ss_dssp             HHHHHHHHHCCGGGCSSCSCEECCSE
T ss_pred             HHHHHHHHhCCccccccCceEecCCc
Confidence            999998875543 2335788999864

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.87  E-value=7.8e-22  Score=169.80  Aligned_cols=218  Identities=16%  Similarity=0.154  Sum_probs=154.1

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcC-CeEEEeecCcchHH-HHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEE
Q 024145           17 VAIITGGASGIGAMAVELFHENG-AKVVIADVQDKLGE-DLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMY   94 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G-~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv   94 (272)
                      ++|||||+|+||++++++|+++| ++|++++|+..... ....    .+. +.+|+++.++++++++...  ++++|+||
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~----~~~-~~~d~~~~~~~~~~~~~~~--~~~~d~vi   73 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLV----DLN-IADYMDKEDFLIQIMAGEE--FGDVEAIF   73 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHH----TSC-CSEEEEHHHHHHHHHTTCC--CSSCCEEE
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCchhhhcC----cce-eccccccHHHHHHHHhccc--cCCCcEEE
Confidence            48999999999999999999999 89999998765421 1111    122 6789999888776654110  12699999


Q ss_pred             eCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCC-----------CCchh
Q 024145           95 NNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGL-----------GSPAY  163 (272)
Q Consensus        95 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~-----------~~~~Y  163 (272)
                      |+||....        +.+++.+.+++|+.++..+++++.+.    +. ++|++||........           ....|
T Consensus        74 ~~a~~~~~--------~~~~~~~~~~~n~~~~~~l~~a~~~~----~~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y  140 (310)
T 1eq2_A           74 HEGACSST--------TEWDGKYMMDNNYQYSKELLHYCLER----EI-PFLYASSAATYGGRTSDFIESREYEKPLNVY  140 (310)
T ss_dssp             ECCSCCCT--------TCCCHHHHHHHTHHHHHHHHHHHHHH----TC-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSHH
T ss_pred             ECcccccC--------cccCHHHHHHHHHHHHHHHHHHHHHc----CC-eEEEEeeHHHhCCCCCCCCCCCCCCCCCChh
Confidence            99996532        22346788999999999999988764    33 799999986543221           24589


Q ss_pred             hhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCC---C-ChhHHHHHHhhc-------CCC-CCCCCChHhH
Q 024145          164 TISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGG---V-DPALIESSMSQM-------GNL-KGEFLKTDGI  231 (272)
Q Consensus       164 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~---~-~~~~~~~~~~~~-------~~~-~~~~~~~~dv  231 (272)
                      +.+|.+.+.+++.++.+   .|+++++++||++.+|......   . ............       ... ...+..++|+
T Consensus       141 ~~sK~~~e~~~~~~~~~---~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dv  217 (310)
T 1eq2_A          141 GYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDV  217 (310)
T ss_dssp             HHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHH
T ss_pred             HHHHHHHHHHHHHHHHH---cCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHH
Confidence            99999999999998876   5899999999999988643100   0 011111111110       011 2456789999


Q ss_pred             HHHHHHHhcCCCCCccccEEEecCceeecc
Q 024145          232 ANAALYLASDESSYVSGQNLVVDGGFSVVN  261 (272)
Q Consensus       232 a~~~~~l~s~~~~~~~G~~i~~dgG~~~~~  261 (272)
                      |++++.++....    |+.+++.+|..+..
T Consensus       218 a~~~~~~~~~~~----~~~~~i~~~~~~s~  243 (310)
T 1eq2_A          218 ADVNLWFLENGV----SGIFNLGTGRAESF  243 (310)
T ss_dssp             HHHHHHHHHHCC----CEEEEESCSCCBCH
T ss_pred             HHHHHHHHhcCC----CCeEEEeCCCccCH
Confidence            999999886543    78999998876543

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.87  E-value=1.3e-21  Score=166.74  Aligned_cols=198  Identities=12%  Similarity=0.051  Sum_probs=149.0

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHc--CCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           16 KVAIITGGASGIGAMAVELFHEN--GAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      |++|||||+|+||++++++|+++  |++|++++|++...+.+..   .++.++.+|++|+++++++++       ++|++
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~---~~~~~~~~D~~d~~~l~~~~~-------~~d~v   70 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLAD---QGVEVRHGDYNQPESLQKAFA-------GVSKL   70 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHH---TTCEEEECCTTCHHHHHHHTT-------TCSEE
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhh---cCCeEEEeccCCHHHHHHHHh-------cCCEE
Confidence            46999999999999999999999  9999999998776554432   467899999999998877665       68999


Q ss_pred             EeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHHHHH
Q 024145           94 YNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGL  173 (272)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~  173 (272)
                      ||+++.. .        . +      ++|+.++..+++++..    .+-++||++||.....   ....|+.+|.+.+.+
T Consensus        71 i~~a~~~-~--------~-~------~~n~~~~~~l~~a~~~----~~~~~~v~~Ss~~~~~---~~~~y~~~K~~~E~~  127 (287)
T 2jl1_A           71 LFISGPH-Y--------D-N------TLLIVQHANVVKAARD----AGVKHIAYTGYAFAEE---SIIPLAHVHLATEYA  127 (287)
T ss_dssp             EECCCCC-S--------C-H------HHHHHHHHHHHHHHHH----TTCSEEEEEEETTGGG---CCSTHHHHHHHHHHH
T ss_pred             EEcCCCC-c--------C-c------hHHHHHHHHHHHHHHH----cCCCEEEEECCCCCCC---CCCchHHHHHHHHHH
Confidence            9999852 1        1 1      5788899988888765    3456899999987642   234899999999998


Q ss_pred             HHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHh-h---c--CCCCCCCCChHhHHHHHHHHhcCCCCCcc
Q 024145          174 VKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMS-Q---M--GNLKGEFLKTDGIANAALYLASDESSYVS  247 (272)
Q Consensus       174 ~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~-~---~--~~~~~~~~~~~dva~~~~~l~s~~~~~~~  247 (272)
                      ++.       .|++++.++||++.++....      ....... .   .  ......+.+++|+|++++.++..+.  ..
T Consensus       128 ~~~-------~~~~~~ilrp~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~--~~  192 (287)
T 2jl1_A          128 IRT-------TNIPYTFLRNALYTDFFVNE------GLRASTESGAIVTNAGSGIVNSVTRNELALAAATVLTEEG--HE  192 (287)
T ss_dssp             HHH-------TTCCEEEEEECCBHHHHSSG------GGHHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHTSSS--CT
T ss_pred             HHH-------cCCCeEEEECCEeccccchh------hHHHHhhCCceeccCCCCccCccCHHHHHHHHHHHhcCCC--CC
Confidence            753       58999999999988765221      1111111 1   0  1112468899999999999987643  37


Q ss_pred             ccEEEecCceeecc
Q 024145          248 GQNLVVDGGFSVVN  261 (272)
Q Consensus       248 G~~i~~dgG~~~~~  261 (272)
                      |+.|++++|..+..
T Consensus       193 g~~~~i~~~~~~s~  206 (287)
T 2jl1_A          193 NKTYNLVSNQPWTF  206 (287)
T ss_dssp             TEEEEECCSSCBCH
T ss_pred             CcEEEecCCCcCCH
Confidence            89999999866543

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.86  E-value=6.6e-21  Score=181.75  Aligned_cols=234  Identities=15%  Similarity=0.119  Sum_probs=160.8

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHH----HHHHHhCCceEEEEecCCCHHHHHHHHHHHHHH
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGE----DLADKLGQDVCYIHCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (272)
                      ..+++|++|||||+|+||++++++|+++|++|++++|+.....    .+....+.++.++.+|++++++++++++..   
T Consensus         7 ~~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~---   83 (699)
T 1z45_A            7 SESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEY---   83 (699)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHS---
T ss_pred             cccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhC---
Confidence            4568899999999999999999999999999999998754322    221122457889999999999988877643   


Q ss_pred             hCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccccccc----------
Q 024145           87 FGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIA----------  156 (272)
Q Consensus        87 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~----------  156 (272)
                        ++|+|||+||....  .    ...+...+.+++|+.++..+++++..    .+.++||++||......          
T Consensus        84 --~~D~Vih~A~~~~~--~----~~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~~iV~~SS~~vyg~~~~~~~~~~~  151 (699)
T 1z45_A           84 --KIDSVIHFAGLKAV--G----ESTQIPLRYYHNNILGTVVLLELMQQ----YNVSKFVFSSSATVYGDATRFPNMIPI  151 (699)
T ss_dssp             --CCCEEEECCSCCCH--H----HHHHSHHHHHHHHHHHHHHHHHHHHH----HTCCEEEEEEEGGGGCCGGGSTTCCSB
T ss_pred             --CCCEEEECCcccCc--C----ccccCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEECcHHHhCCCccccccCCc
Confidence              69999999997532  1    11233467899999999999887754    24578999999764321          


Q ss_pred             -----CCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCC--------CC-hhHHHHHHhh---cC
Q 024145          157 -----GLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGG--------VD-PALIESSMSQ---MG  219 (272)
Q Consensus       157 -----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~--------~~-~~~~~~~~~~---~~  219 (272)
                           ......|+.||++++.+++.++.+. +.|+++.+++|+.+..+......        .. ...+......   ..
T Consensus       152 ~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  230 (699)
T 1z45_A          152 PEECPLGPTNPYGHTKYAIENILNDLYNSD-KKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKL  230 (699)
T ss_dssp             CTTSCCCCCSHHHHHHHHHHHHHHHHHHHS-TTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCC
T ss_pred             cccCCCCCCChHHHHHHHHHHHHHHHHHhc-cCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCce
Confidence                 1234689999999999999998875 45899999999988776421100        00 1112221111   01


Q ss_pred             CC------------CCCCCChHhHHHHHHHHhcCC----CCCccccEEEecCceeec
Q 024145          220 NL------------KGEFLKTDGIANAALYLASDE----SSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       220 ~~------------~~~~~~~~dva~~~~~l~s~~----~~~~~G~~i~~dgG~~~~  260 (272)
                      ..            ...+...+|+|++++.++...    ...-.|+.+++.+|..+.
T Consensus       231 ~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~~~s  287 (699)
T 1z45_A          231 YIFGDDYDSRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGST  287 (699)
T ss_dssp             CCC------CCSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEE
T ss_pred             EEeCCcccCCCCCeeEeeEEHHHHHHHHHHHHhhhhccccccCCceEEEECCCCCCc
Confidence            11            124567899999998877421    111246789998887554

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.86  E-value=7.2e-21  Score=173.90  Aligned_cols=224  Identities=13%  Similarity=0.059  Sum_probs=158.6

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHc---CCeEEEeecCcchHHHHH---H---------------HhCCceEEEEec
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHEN---GAKVVIADVQDKLGEDLA---D---------------KLGQDVCYIHCD   69 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~---G~~V~~~~r~~~~~~~~~---~---------------~~~~~~~~~~~D   69 (272)
                      ...++|+||||||+|+||++++++|+++   |++|++++|+........   +               ....++.++.+|
T Consensus        69 ~~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~D  148 (478)
T 4dqv_A           69 PSPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGD  148 (478)
T ss_dssp             CCSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECC
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeE
Confidence            4467899999999999999999999999   999999999876432211   1               123589999999


Q ss_pred             CC------CHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCc
Q 024145           70 IS------NEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKG  143 (272)
Q Consensus        70 ~~------~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g  143 (272)
                      ++      +.++++++++       ++|+|||+||....          +.+.+.+++|+.++..+++.+..    .+..
T Consensus       149 l~~~~~gld~~~~~~~~~-------~~D~Vih~Aa~~~~----------~~~~~~~~~Nv~gt~~ll~aa~~----~~~~  207 (478)
T 4dqv_A          149 KSEPDLGLDQPMWRRLAE-------TVDLIVDSAAMVNA----------FPYHELFGPNVAGTAELIRIALT----TKLK  207 (478)
T ss_dssp             TTSGGGGCCHHHHHHHHH-------HCCEEEECCSSCSB----------SSCCEEHHHHHHHHHHHHHHHTS----SSCC
T ss_pred             CCCcccCCCHHHHHHHHc-------CCCEEEECccccCC----------cCHHHHHHHHHHHHHHHHHHHHh----CCCC
Confidence            98      6667766655       58999999997543          22346789999999999987754    3445


Q ss_pred             eEEEEecccccccCCC----------------------CchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcc
Q 024145          144 CILFTASACTEIAGLG----------------------SPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMS  201 (272)
Q Consensus       144 ~iv~iss~~~~~~~~~----------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~  201 (272)
                      ++|++||.........                      ...|+.||.+.+.+++.++.+.   |+++++++||.+.++..
T Consensus       208 ~~V~iSS~~v~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ivRpg~v~G~~~  284 (478)
T 4dqv_A          208 PFTYVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLC---ALPVAVFRCGMILADTS  284 (478)
T ss_dssp             CEEEEEEGGGGTTSCTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECCSS
T ss_pred             eEEEEeehhhcCccCCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHh---CCCeEEEECceeeCCCc
Confidence            7999999754322111                      1339999999999999998874   79999999999988743


Q ss_pred             cCCC-CChhHHHHHHh---h--cCC--------------CCCCCCChHhHHHHHHHHhcCC--CCCccccEEEecCcee
Q 024145          202 MKGG-VDPALIESSMS---Q--MGN--------------LKGEFLKTDGIANAALYLASDE--SSYVSGQNLVVDGGFS  258 (272)
Q Consensus       202 ~~~~-~~~~~~~~~~~---~--~~~--------------~~~~~~~~~dva~~~~~l~s~~--~~~~~G~~i~~dgG~~  258 (272)
                      .... .....+.....   .  ..+              ....+...+|+|++++.++...  .....|++|++.++..
T Consensus       285 ~~g~~~~~~~~~~l~~~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~~~  363 (478)
T 4dqv_A          285 YAGQLNMSDWVTRMVLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHD  363 (478)
T ss_dssp             SSSCCCTTBHHHHHHHHHHHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCCCC
T ss_pred             cCCcCCHHHHHHHHHHHHHHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCCCC
Confidence            2111 11222222211   1  111              1124577899999999887541  1223688999988764

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.86  E-value=3.6e-21  Score=162.75  Aligned_cols=197  Identities=14%  Similarity=0.104  Sum_probs=143.8

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEeC
Q 024145           17 VAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNN   96 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~   96 (272)
                      ++|||||+|+||++++++|+ +|++|++++|++...        .+   +.+|++|+++++++++..     ++|+||||
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~~--------~~---~~~Dl~~~~~~~~~~~~~-----~~d~vi~~   64 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEIQ--------GG---YKLDLTDFPRLEDFIIKK-----RPDVIINA   64 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCCT--------TC---EECCTTSHHHHHHHHHHH-----CCSEEEEC
T ss_pred             EEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcCC--------CC---ceeccCCHHHHHHHHHhc-----CCCEEEEC
Confidence            58999999999999999999 589999999987531        12   889999999998888765     69999999


Q ss_pred             CCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCC----------CCchhhhh
Q 024145           97 AGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGL----------GSPAYTIS  166 (272)
Q Consensus        97 ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~----------~~~~Y~~s  166 (272)
                      ||....      +.+.+++++.+++|+.++..+++++.+    . ++++|++||.....+.+          ....|+.+
T Consensus        65 a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~----~-~~~iv~~SS~~~~~~~~~~~~e~~~~~~~~~Y~~s  133 (273)
T 2ggs_A           65 AAMTDV------DKCEIEKEKAYKINAEAVRHIVRAGKV----I-DSYIVHISTDYVFDGEKGNYKEEDIPNPINYYGLS  133 (273)
T ss_dssp             CCCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHH----T-TCEEEEEEEGGGSCSSSCSBCTTSCCCCSSHHHHH
T ss_pred             CcccCh------hhhhhCHHHHHHHhHHHHHHHHHHHHH----h-CCeEEEEecceeEcCCCCCcCCCCCCCCCCHHHHH
Confidence            996532      123467889999999999999998875    2 35899999987654432          25689999


Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCC-----CCCCCChHhHHHHHHHHhcC
Q 024145          167 KYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNL-----KGEFLKTDGIANAALYLASD  241 (272)
Q Consensus       167 K~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~dva~~~~~l~s~  241 (272)
                      |++++.+++.         +....++|+.+..+  .   ..............+.     ...+.+++|+|++++++++.
T Consensus       134 K~~~e~~~~~---------~~~~~iR~~~v~G~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~~~~~  199 (273)
T 2ggs_A          134 KLLGETFALQ---------DDSLIIRTSGIFRN--K---GFPIYVYKTLKEGKTVFAFKGYYSPISARKLASAILELLEL  199 (273)
T ss_dssp             HHHHHHHHCC---------TTCEEEEECCCBSS--S---SHHHHHHHHHHTTCCEEEESCEECCCBHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhC---------CCeEEEeccccccc--c---HHHHHHHHHHHcCCCEEeecCCCCceEHHHHHHHHHHHHhc
Confidence            9999999877         23456777776631  0   1111111111111110     25788999999999999876


Q ss_pred             CCCCccccEEEecCceeec
Q 024145          242 ESSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       242 ~~~~~~G~~i~~dgG~~~~  260 (272)
                      ..   +| .|++++ ..+.
T Consensus       200 ~~---~g-~~~i~~-~~~s  213 (273)
T 2ggs_A          200 RK---TG-IIHVAG-ERIS  213 (273)
T ss_dssp             TC---CE-EEECCC-CCEE
T ss_pred             Cc---CC-eEEECC-Cccc
Confidence            42   45 888888 5443

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.86  E-value=4.1e-21  Score=165.36  Aligned_cols=219  Identities=14%  Similarity=0.074  Sum_probs=153.4

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   91 (272)
                      .++++++|||||+|+||++++++|+++|+      +....        ...+.++.+|++|+++++++++..     ++|
T Consensus         3 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~~--------~~~~~~~~~D~~d~~~~~~~~~~~-----~~d   63 (319)
T 4b8w_A            3 YFQSMRILVTGGSGLVGKAIQKVVADGAG------LPGED--------WVFVSSKDADLTDTAQTRALFEKV-----QPT   63 (319)
T ss_dssp             CCCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTCE--------EEECCTTTCCTTSHHHHHHHHHHS-----CCS
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhcCC------ccccc--------ccccCceecccCCHHHHHHHHhhc-----CCC
Confidence            36789999999999999999999999998      11100        012334578999999998877742     699


Q ss_pred             EEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccccccc---------------
Q 024145           92 IMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIA---------------  156 (272)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~---------------  156 (272)
                      +|||+|+....     ...+.++..+.+++|+.++..+++++...    +-.++|++||......               
T Consensus        64 ~Vih~A~~~~~-----~~~~~~~~~~~~~~nv~gt~~ll~a~~~~----~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~  134 (319)
T 4b8w_A           64 HVIHLAAMVGG-----LFRNIKYNLDFWRKNVHMNDNVLHSAFEV----GARKVVSCLSTCIFPDKTTYPIDETMIHNGP  134 (319)
T ss_dssp             EEEECCCCCCC-----HHHHTTCHHHHHHHHHHHHHHHHHHHHHT----TCSEEEEECCGGGSCSSCCSSBCGGGGGBSC
T ss_pred             EEEECceeccc-----ccccccCHHHHHHHHHHHHHHHHHHHHHc----CCCeEEEEcchhhcCCCCCCCccccccccCC
Confidence            99999997431     11122445678999999999999988653    3458999999864321               


Q ss_pred             -CCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCC----hhHHHH----HHhhcC-C------
Q 024145          157 -GLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVD----PALIES----SMSQMG-N------  220 (272)
Q Consensus       157 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~----~~~~~~----~~~~~~-~------  220 (272)
                       .+....|+.+|.+.+.+++.++.+.   |+++.+++|+.+.+|........    +.....    ...... .      
T Consensus       135 ~~p~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  211 (319)
T 4b8w_A          135 PHNSNFGYSYAKRMIDVQNRAYFQQY---GCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGN  211 (319)
T ss_dssp             CCSSSHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSC
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHhh---CCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCC
Confidence             1122269999999999999999884   79999999999998875421111    112222    111111 0      


Q ss_pred             CCCCCCChHhHHHHHHHHhcCCCCCccccEEEecCceeeccC
Q 024145          221 LKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVVNP  262 (272)
Q Consensus       221 ~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~  262 (272)
                      ....+..++|+|++++.++..... ..|++|++.+|..++..
T Consensus       212 ~~~~~i~v~Dva~a~~~~~~~~~~-~~~~~~ni~~~~~~s~~  252 (319)
T 4b8w_A          212 PRRQFIYSLDLAQLFIWVLREYNE-VEPIILSVGEEDEVSIK  252 (319)
T ss_dssp             CEECEEEHHHHHHHHHHHHHHCCC-SSCEEECCCGGGCEEHH
T ss_pred             eeEEEEeHHHHHHHHHHHHhcccc-CCceEEEecCCCceeHH
Confidence            113567899999999998865322 35788989887665433

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.86  E-value=1.5e-21  Score=166.47  Aligned_cols=196  Identities=17%  Similarity=0.068  Sum_probs=147.1

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEeC
Q 024145           17 VAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNN   96 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~   96 (272)
                      ++|||||+|+||++++++|+++|++|++++|.                  .+|++|.++++++++..     ++|+|||+
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~------------------~~D~~d~~~~~~~~~~~-----~~d~vi~~   63 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKK------------------LLDITNISQVQQVVQEI-----RPHIIIHC   63 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTEEEEEECTT------------------TSCTTCHHHHHHHHHHH-----CCSEEEEC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeccc------------------ccCCCCHHHHHHHHHhc-----CCCEEEEC
Confidence            89999999999999999999999999999982                  37999999998888765     79999999


Q ss_pred             CCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccC-----------CCCchhhh
Q 024145           97 AGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAG-----------LGSPAYTI  165 (272)
Q Consensus        97 ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~-----------~~~~~Y~~  165 (272)
                      ||....      ....+++.+.+++|+.++..+++++.+.     +.++|++||.....+.           .....|+.
T Consensus        64 a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~  132 (287)
T 3sc6_A           64 AAYTKV------DQAEKERDLAYVINAIGARNVAVASQLV-----GAKLVYISTDYVFQGDRPEGYDEFHNPAPINIYGA  132 (287)
T ss_dssp             CCCCCH------HHHTTCHHHHHHHHTHHHHHHHHHHHHH-----TCEEEEEEEGGGSCCCCSSCBCTTSCCCCCSHHHH
T ss_pred             CcccCh------HHHhcCHHHHHHHHHHHHHHHHHHHHHc-----CCeEEEEchhhhcCCCCCCCCCCCCCCCCCCHHHH
Confidence            997542      1122457889999999999999988763     2379999998654321           23468999


Q ss_pred             hHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhc------CCCCCCCCChHhHHHHHHHHh
Q 024145          166 SKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQM------GNLKGEFLKTDGIANAALYLA  239 (272)
Q Consensus       166 sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~dva~~~~~l~  239 (272)
                      +|.+.+.+++.++.       .+..++|+.+.+|...   .............      ......+..++|+|+++++++
T Consensus       133 sK~~~E~~~~~~~~-------~~~ilR~~~v~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~  202 (287)
T 3sc6_A          133 SKYAGEQFVKELHN-------KYFIVRTSWLYGKYGN---NFVKTMIRLGKEREEISVVADQIGSPTYVADLNVMINKLI  202 (287)
T ss_dssp             HHHHHHHHHHHHCS-------SEEEEEECSEECSSSC---CHHHHHHHHHTTCSEEEEECSCEECCEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCC-------CcEEEeeeeecCCCCC---cHHHHHHHHHHcCCCeEeecCcccCceEHHHHHHHHHHHH
Confidence            99999999887654       3588999999887533   1111111111111      111245677999999999999


Q ss_pred             cCCCCCccccEEEecCceeec
Q 024145          240 SDESSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       240 s~~~~~~~G~~i~~dgG~~~~  260 (272)
                      ....    ++.+++.+|..+.
T Consensus       203 ~~~~----~~~~~i~~~~~~s  219 (287)
T 3sc6_A          203 HTSL----YGTYHVSNTGSCS  219 (287)
T ss_dssp             TSCC----CEEEECCCBSCEE
T ss_pred             hCCC----CCeEEEcCCCccc
Confidence            7654    6699999887554

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.85  E-value=1.1e-21  Score=169.44  Aligned_cols=218  Identities=16%  Similarity=0.115  Sum_probs=149.6

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcch----HHHHHHHh-CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKL----GEDLADKL-GQDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~----~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      +.+|++|||||+|+||++++++|+++|++|++++|+...    .+.+.+.. ...+.++.+|++                
T Consensus         5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~----------------   68 (321)
T 3vps_A            5 TLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS----------------   68 (321)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT----------------
T ss_pred             cCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc----------------
Confidence            467899999999999999999999999999999997651    11111100 123444555554                


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccC----------
Q 024145           88 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAG----------  157 (272)
Q Consensus        88 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~----------  157 (272)
                       ++|+|||+||.....  .    ..++....++ |+.++..+++++...    +-.++|++||.......          
T Consensus        69 -~~d~vi~~a~~~~~~--~----~~~~~~~~~~-n~~~~~~ll~a~~~~----~v~~~v~~SS~~v~~~~~~~~~~E~~~  136 (321)
T 3vps_A           69 -DVRLVYHLASHKSVP--R----SFKQPLDYLD-NVDSGRHLLALCTSV----GVPKVVVGSTCEVYGQADTLPTPEDSP  136 (321)
T ss_dssp             -TEEEEEECCCCCCHH--H----HTTSTTTTHH-HHHHHHHHHHHHHHH----TCCEEEEEEEGGGGCSCSSSSBCTTSC
T ss_pred             -cCCEEEECCccCChH--H----HHhCHHHHHH-HHHHHHHHHHHHHHc----CCCeEEEecCHHHhCCCCCCCCCCCCC
Confidence             699999999976421  0    0111223456 999999999988764    34579999997654322          


Q ss_pred             -CCCchhhhhHHHHHHHHHHHHHHhcCCCc-EEEEEeCCcccCCcccCCCCChhHHHHHHhhc-------CCCCCCCCCh
Q 024145          158 -LGSPAYTISKYGILGLVKCLAAELGQYGI-RVNCVSPYGLATGMSMKGGVDPALIESSMSQM-------GNLKGEFLKT  228 (272)
Q Consensus       158 -~~~~~Y~~sK~a~~~~~~~la~e~~~~gi-~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~  228 (272)
                       .....|+.+|.+.+.+++.++.+   .|+ ++++++|+.+.+|...................       ......+..+
T Consensus       137 ~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v  213 (321)
T 3vps_A          137 LSPRSPYAASKVGLEMVAGAHQRA---SVAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQRRDFTYI  213 (321)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHS---SSSCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEEEEETTSCCEECEEEH
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHH---cCCCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCeEEeCCCCceEceEEH
Confidence             23468999999999999999887   588 99999999999887553111112222222211       1112356789


Q ss_pred             HhHHHHHHHHhcCCCCCccccEEEecCceeeccCccc
Q 024145          229 DGIANAALYLASDESSYVSGQNLVVDGGFSVVNPTVM  265 (272)
Q Consensus       229 ~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~~~  265 (272)
                      +|+|+++++++.....   | .|++.+|..+....++
T Consensus       214 ~Dva~~~~~~~~~~~~---g-~~~i~~~~~~s~~e~~  246 (321)
T 3vps_A          214 TDVVDKLVALANRPLP---S-VVNFGSGQSLSVNDVI  246 (321)
T ss_dssp             HHHHHHHHHGGGSCCC---S-EEEESCSCCEEHHHHH
T ss_pred             HHHHHHHHHHHhcCCC---C-eEEecCCCcccHHHHH
Confidence            9999999999977653   7 9999998876544443

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.85  E-value=1.4e-21  Score=167.50  Aligned_cols=205  Identities=13%  Similarity=0.030  Sum_probs=148.3

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEeC
Q 024145           17 VAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNN   96 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~   96 (272)
                      ++|||||+|+||++++++|+ +|++|++++|+..              ++.+|++|+++++++++..     ++|+|||+
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~--------------~~~~D~~d~~~~~~~~~~~-----~~d~vih~   61 (299)
T 1n2s_A            2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK--------------EFCGDFSNPKGVAETVRKL-----RPDVIVNA   61 (299)
T ss_dssp             EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS--------------SSCCCTTCHHHHHHHHHHH-----CCSEEEEC
T ss_pred             eEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc--------------cccccCCCHHHHHHHHHhc-----CCCEEEEC
Confidence            69999999999999999999 8999999998752              3578999999988877754     69999999


Q ss_pred             CCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccC-----------CCCchhhh
Q 024145           97 AGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAG-----------LGSPAYTI  165 (272)
Q Consensus        97 ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~-----------~~~~~Y~~  165 (272)
                      ||....      ..+.+++.+.+++|+.++..+++++..    .+ .++|++||.....+.           .....|+.
T Consensus        62 a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~a~~~----~~-~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~  130 (299)
T 1n2s_A           62 AAHTAV------DKAESEPELAQLLNATSVEAIAKAANE----TG-AWVVHYSTDYVFPGTGDIPWQETDATSPLNVYGK  130 (299)
T ss_dssp             CCCCCH------HHHTTCHHHHHHHHTHHHHHHHHHHTT----TT-CEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHH
T ss_pred             cccCCH------hhhhcCHHHHHHHHHHHHHHHHHHHHH----cC-CcEEEEecccEEeCCCCCCCCCCCCCCCccHHHH
Confidence            996532      012245678899999999999998743    22 389999998654322           12458999


Q ss_pred             hHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhc-----CCCCCCCCChHhHHHHHHHHhc
Q 024145          166 SKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQM-----GNLKGEFLKTDGIANAALYLAS  240 (272)
Q Consensus       166 sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~dva~~~~~l~s  240 (272)
                      +|.+.+.+++.++.       +++.++|+++.++....  .............     ......+..++|+|++++.++.
T Consensus       131 sK~~~E~~~~~~~~-------~~~ilRp~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~  201 (299)
T 1n2s_A          131 TKLAGEKALQDNCP-------KHLIFRTSWVYAGKGNN--FAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIR  201 (299)
T ss_dssp             HHHHHHHHHHHHCS-------SEEEEEECSEECSSSCC--HHHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCC-------CeEEEeeeeecCCCcCc--HHHHHHHHHhcCCCEEeecCcccCCeeHHHHHHHHHHHHH
Confidence            99999999887642       78999999999886431  1111111111111     1111456679999999999886


Q ss_pred             CCCCCc-cccEEEecCceeecc
Q 024145          241 DESSYV-SGQNLVVDGGFSVVN  261 (272)
Q Consensus       241 ~~~~~~-~G~~i~~dgG~~~~~  261 (272)
                      ...... .|+.+++.+|..+..
T Consensus       202 ~~~~~~~~~~~~~i~~~~~~s~  223 (299)
T 1n2s_A          202 VALNKPEVAGLYHLVAGGTTTW  223 (299)
T ss_dssp             HHHHCGGGCEEEECCCBSCEEH
T ss_pred             HhccccccCceEEEeCCCCCCH
Confidence            532122 488999999875543

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.84  E-value=2.3e-20  Score=171.76  Aligned_cols=222  Identities=15%  Similarity=0.109  Sum_probs=159.1

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHH---HH------------HHHhCCceEEEEecCCCHHHHHH
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGE---DL------------ADKLGQDVCYIHCDISNEDEVIN   78 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~---~~------------~~~~~~~~~~~~~D~~~~~~~~~   78 (272)
                      ..|++|||||+|+||++++++|.+.|++|++++|+....+   .+            ......++.++.+|+++++++. 
T Consensus       149 ~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-  227 (508)
T 4f6l_B          149 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-  227 (508)
T ss_dssp             CCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC-
T ss_pred             CCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC-
Confidence            3489999999999999999999999999999999876321   11            1123568999999999988776 


Q ss_pred             HHHHHHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccc--cc-
Q 024145           79 LVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACT--EI-  155 (272)
Q Consensus        79 ~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~--~~-  155 (272)
                             ...++|+|||+|+....         ...+...+++|+.++..+++.+.+     ...++|++||...  .. 
T Consensus       228 -------~~~~~D~Vih~Aa~~~~---------~~~~~~~~~~Nv~gt~~ll~~a~~-----~~~~~v~iSS~~vG~~~~  286 (508)
T 4f6l_B          228 -------LPENMDTIIHAGARTDH---------FGDDDEFEKVNVQGTVDVIRLAQQ-----HHARLIYVSTISVGTYFD  286 (508)
T ss_dssp             -------CSSCCSEEEECCCC-----------------CCHHHHHHHHHHHHHHHHT-----TTCEEEEEEESCTTSEEC
T ss_pred             -------CccCCCEEEECCceecC---------CCCHHHHhhhHHHHHHHHHHHHHh-----CCCcEEEeCChhhccCCc
Confidence                   34589999999997532         235677889999999999998865     3468999999876  10 


Q ss_pred             ---------------cCCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCC---ChhHHHHHHhh
Q 024145          156 ---------------AGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGV---DPALIESSMSQ  217 (272)
Q Consensus       156 ---------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~---~~~~~~~~~~~  217 (272)
                                     +......|+.+|.+.|.+++.++.    .|+++++++||.+.++.......   ........+..
T Consensus       287 ~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~  362 (508)
T 4f6l_B          287 IDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMND  362 (508)
T ss_dssp             TTCSCCEECTTCSCSSBCCCSHHHHHHHHHHHHHHHHHH----TTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHH
T ss_pred             cCCcCcccccccccccccCCCcHHHHHHHHHHHHHHHHH----cCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHH
Confidence                           011456899999999999998753    58999999999999886543210   01111122211


Q ss_pred             c---CC-------CCCCCCChHhHHHHHHHHhcCCCCCccccEEEecCceeeccCcc
Q 024145          218 M---GN-------LKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVVNPTV  264 (272)
Q Consensus       218 ~---~~-------~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~~  264 (272)
                      .   ..       ....+..++|+|+++++++....   .|++|++.+|..+....+
T Consensus       363 ~~~~~~~~~~~g~~~~~~v~v~DvA~ai~~~~~~~~---~~~~~nl~~~~~~s~~el  416 (508)
T 4f6l_B          363 LLQLDCIGVSMAEMPVDFSFVDTTARQIVALAQVNT---PQIIYHVLSPNKMPVKSL  416 (508)
T ss_dssp             HTTCSEEETTGGGSEEECEEHHHHHHHHHHHTTBCC---SCSEEEESCSCEEEHHHH
T ss_pred             HHHcCCCCCCccCceEEEEcHHHHHHHHHHHHhCCC---CCCEEEeCCCCCCCHHHH
Confidence            1   11       11246778999999999987654   789999999887654433

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.84  E-value=1.1e-21  Score=167.42  Aligned_cols=205  Identities=12%  Similarity=0.045  Sum_probs=149.4

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      +++++|||| +|+||++++++|+++|++|++++|+...       ...++.++.+|++|.++++++++      +++|+|
T Consensus         2 ~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~-------~~~~~~~~~~Dl~d~~~~~~~~~------~~~d~v   67 (286)
T 3gpi_A            2 SLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQP-------MPAGVQTLIADVTRPDTLASIVH------LRPEIL   67 (286)
T ss_dssp             CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSC-------CCTTCCEEECCTTCGGGCTTGGG------GCCSEE
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCccc-------cccCCceEEccCCChHHHHHhhc------CCCCEE
Confidence            457899999 5999999999999999999999998764       24678899999999998877654      269999


Q ss_pred             EeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccccccc-----------CCCCch
Q 024145           94 YNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIA-----------GLGSPA  162 (272)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~-----------~~~~~~  162 (272)
                      ||+||...           .+....+++|+.++..+++++.    +.+.+++|++||......           ......
T Consensus        68 ih~a~~~~-----------~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~  132 (286)
T 3gpi_A           68 VYCVAASE-----------YSDEHYRLSYVEGLRNTLSALE----GAPLQHVFFVSSTGVYGQEVEEWLDEDTPPIAKDF  132 (286)
T ss_dssp             EECHHHHH-----------HC-----CCSHHHHHHHHHHTT----TSCCCEEEEEEEGGGCCCCCSSEECTTSCCCCCSH
T ss_pred             EEeCCCCC-----------CCHHHHHHHHHHHHHHHHHHHh----hCCCCEEEEEcccEEEcCCCCCCCCCCCCCCCCCh
Confidence            99998531           3456778899999998888764    345578999999765322           123568


Q ss_pred             hhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHh----hcCCCCCCCCChHhHHHHHHHH
Q 024145          163 YTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMS----QMGNLKGEFLKTDGIANAALYL  238 (272)
Q Consensus       163 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~dva~~~~~l  238 (272)
                      |+.+|.+.|.+ +..        +++++++|+.+.++...      ........    ........+..++|+|++++++
T Consensus       133 Y~~sK~~~E~~-~~~--------~~~~ilR~~~v~G~~~~------~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~  197 (286)
T 3gpi_A          133 SGKRMLEAEAL-LAA--------YSSTILRFSGIYGPGRL------RMIRQAQTPEQWPARNAWTNRIHRDDGAAFIAYL  197 (286)
T ss_dssp             HHHHHHHHHHH-GGG--------SSEEEEEECEEEBTTBC------HHHHHTTCGGGSCSSBCEECEEEHHHHHHHHHHH
T ss_pred             hhHHHHHHHHH-Hhc--------CCeEEEecccccCCCch------hHHHHHHhcccCCCcCceeEEEEHHHHHHHHHHH
Confidence            99999999987 542        78999999999987643      11111111    1111224677899999999999


Q ss_pred             hcCCCCCccccEEEecCceeeccC
Q 024145          239 ASDESSYVSGQNLVVDGGFSVVNP  262 (272)
Q Consensus       239 ~s~~~~~~~G~~i~~dgG~~~~~~  262 (272)
                      +........|+.+++.+|..++..
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~s~~  221 (286)
T 3gpi_A          198 IQQRSHAVPERLYIVTDNQPLPVH  221 (286)
T ss_dssp             HHHHTTSCCCSEEEECCSCCEEHH
T ss_pred             HhhhccCCCCceEEEeCCCCCCHH
Confidence            876422346899999988765433

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.84  E-value=2e-20  Score=159.29  Aligned_cols=198  Identities=14%  Similarity=0.077  Sum_probs=141.4

Q ss_pred             EEEEeCCCChHHHHHHHHHHHc--CCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEE
Q 024145           17 VAIITGGASGIGAMAVELFHEN--GAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMY   94 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv   94 (272)
                      ++|||||+|+||++++++|+++  |++|++++|++...+.+..   ..+.++.+|++|+++++++++       ++|+||
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~D~~d~~~~~~~~~-------~~d~vi   70 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAA---QGITVRQADYGDEAALTSALQ-------GVEKLL   70 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHH---TTCEEEECCTTCHHHHHHHTT-------TCSEEE
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhc---CCCeEEEcCCCCHHHHHHHHh-------CCCEEE
Confidence            3899999999999999999998  9999999998776554432   357889999999998877665       689999


Q ss_pred             eCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHHHHHH
Q 024145           95 NNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLV  174 (272)
Q Consensus        95 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~~  174 (272)
                      |++|.. .                 ..|+.++..+++++..    .+-++||++||....   .....|+.+|.+.+.++
T Consensus        71 ~~a~~~-~-----------------~~~~~~~~~l~~a~~~----~~~~~~v~~Ss~~~~---~~~~~y~~sK~~~e~~~  125 (286)
T 2zcu_A           71 LISSSE-V-----------------GQRAPQHRNVINAAKA----AGVKFIAYTSLLHAD---TSPLGLADEHIETEKML  125 (286)
T ss_dssp             ECC--------------------------CHHHHHHHHHHH----HTCCEEEEEEETTTT---TCCSTTHHHHHHHHHHH
T ss_pred             EeCCCC-c-----------------hHHHHHHHHHHHHHHH----cCCCEEEEECCCCCC---CCcchhHHHHHHHHHHH
Confidence            999842 0                 0266677777776654    345689999998764   23358999999999987


Q ss_pred             HHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhc--CCCCCCCCChHhHHHHHHHHhcCCCCCccccEEE
Q 024145          175 KCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQM--GNLKGEFLKTDGIANAALYLASDESSYVSGQNLV  252 (272)
Q Consensus       175 ~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~  252 (272)
                      +.       .|++++.++||++.++...   .............  ......+.+++|+|+++++++..+.  .+|+.|+
T Consensus       126 ~~-------~~~~~~ilrp~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~--~~g~~~~  193 (286)
T 2zcu_A          126 AD-------SGIVYTLLRNGWYSENYLA---SAPAALEHGVFIGAAGDGKIASATRADYAAAAARVISEAG--HEGKVYE  193 (286)
T ss_dssp             HH-------HCSEEEEEEECCBHHHHHT---THHHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHHSSS--CTTCEEE
T ss_pred             HH-------cCCCeEEEeChHHhhhhHH---HhHHhhcCCceeccCCCCccccccHHHHHHHHHHHhcCCC--CCCceEE
Confidence            63       4899999999988776432   1011111000001  1122567899999999999987643  3799999


Q ss_pred             ecCceeecc
Q 024145          253 VDGGFSVVN  261 (272)
Q Consensus       253 ~dgG~~~~~  261 (272)
                      ++||..++.
T Consensus       194 i~~~~~~s~  202 (286)
T 2zcu_A          194 LAGDSAWTL  202 (286)
T ss_dssp             ECCSSCBCH
T ss_pred             EeCCCcCCH
Confidence            999865543

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.82  E-value=5.9e-20  Score=157.59  Aligned_cols=211  Identities=13%  Similarity=0.057  Sum_probs=141.4

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcC-CeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           15 GKVAIITGGASGIGAMAVELFHENG-AKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      .|++|||||+|+||++++++|+++| ++|++++|++...... ......+.++.+|++|+++++++++       ++|+|
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~-~l~~~~~~~~~~D~~d~~~l~~~~~-------~~d~v   76 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAK-ELRLQGAEVVQGDQDDQVIMELALN-------GAYAT   76 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHH-HHHHTTCEEEECCTTCHHHHHHHHT-------TCSEE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHH-HHHHCCCEEEEecCCCHHHHHHHHh-------cCCEE
Confidence            5799999999999999999999999 9999999987654211 1112468899999999999887765       68999


Q ss_pred             EeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccc--cCCCCchhhhhHHHHH
Q 024145           94 YNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEI--AGLGSPAYTISKYGIL  171 (272)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~--~~~~~~~Y~~sK~a~~  171 (272)
                      ||+++....  .            ..+.|+.+...+++++..    .+-++||++|+.....  .......|..+|.+++
T Consensus        77 i~~a~~~~~--~------------~~~~~~~~~~~~~~aa~~----~gv~~iv~~S~~~~~~~~~~~~~~~y~~sK~~~e  138 (299)
T 2wm3_A           77 FIVTNYWES--C------------SQEQEVKQGKLLADLARR----LGLHYVVYSGLENIKKLTAGRLAAAHFDGKGEVE  138 (299)
T ss_dssp             EECCCHHHH--T------------CHHHHHHHHHHHHHHHHH----HTCSEEEECCCCCHHHHTTTSCCCHHHHHHHHHH
T ss_pred             EEeCCCCcc--c------------cchHHHHHHHHHHHHHHH----cCCCEEEEEcCccccccCCCcccCchhhHHHHHH
Confidence            999985321  0            123455555555555443    4557899966644322  1122468999999999


Q ss_pred             HHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHH--HH-hhcCCCCCCCCChHhHHHHHHHHhcCCCCCccc
Q 024145          172 GLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIES--SM-SQMGNLKGEFLKTDGIANAALYLASDESSYVSG  248 (272)
Q Consensus       172 ~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  248 (272)
                      .+++.       .|++++.++||++.+++............+  .. .........+.+++|+|+++..++..... ..|
T Consensus       139 ~~~~~-------~gi~~~ilrp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~-~~g  210 (299)
T 2wm3_A          139 EYFRD-------IGVPMTSVRLPCYFENLLSHFLPQKAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPEK-YVG  210 (299)
T ss_dssp             HHHHH-------HTCCEEEEECCEEGGGGGTTTCCEECTTSSSEEECCCCTTSCEEEECGGGHHHHHHHHHHSHHH-HTT
T ss_pred             HHHHH-------CCCCEEEEeecHHhhhchhhcCCcccCCCCEEEEEecCCCCccceecHHHHHHHHHHHHcChhh-hCC
Confidence            98764       379999999999998765311000000000  00 00011113567899999999998865322 368


Q ss_pred             cEEEecCceeec
Q 024145          249 QNLVVDGGFSVV  260 (272)
Q Consensus       249 ~~i~~dgG~~~~  260 (272)
                      +.+.++| ..+.
T Consensus       211 ~~~~~~g-~~~s  221 (299)
T 2wm3_A          211 QNIGLST-CRHT  221 (299)
T ss_dssp             CEEECCS-EEEC
T ss_pred             eEEEeee-ccCC
Confidence            9999986 4444

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.81  E-value=5.5e-19  Score=150.75  Aligned_cols=200  Identities=13%  Similarity=0.098  Sum_probs=138.0

Q ss_pred             EEEEeCCCChHHHHHHHHHHHc-CCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEe
Q 024145           17 VAIITGGASGIGAMAVELFHEN-GAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYN   95 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~   95 (272)
                      ++|||||+|+||++++++|+++ |++|++++|+++....+   ...++.++.+|++|+++++++++       ++|+|||
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~---~~~~v~~~~~D~~d~~~l~~~~~-------~~d~vi~   71 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD---WRGKVSVRQLDYFNQESMVEAFK-------GMDTVVF   71 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG---GBTTBEEEECCTTCHHHHHHHTT-------TCSEEEE
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh---hhCCCEEEEcCCCCHHHHHHHHh-------CCCEEEE
Confidence            5899999999999999999998 99999999987754332   23578999999999999887665       7899999


Q ss_pred             CCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHHHHHHH
Q 024145           96 NAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVK  175 (272)
Q Consensus        96 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~~~  175 (272)
                      ++|....         .       ..|+.++..+++++..    .+-++||++||......    ..|..++...  +  
T Consensus        72 ~a~~~~~---------~-------~~~~~~~~~l~~aa~~----~gv~~iv~~Ss~~~~~~----~~~~~~~~~~--~--  123 (289)
T 3e48_A           72 IPSIIHP---------S-------FKRIPEVENLVYAAKQ----SGVAHIIFIGYYADQHN----NPFHMSPYFG--Y--  123 (289)
T ss_dssp             CCCCCCS---------H-------HHHHHHHHHHHHHHHH----TTCCEEEEEEESCCSTT----CCSTTHHHHH--H--
T ss_pred             eCCCCcc---------c-------hhhHHHHHHHHHHHHH----cCCCEEEEEcccCCCCC----CCCccchhHH--H--
Confidence            9986432         1       2256666666555543    45578999999654322    2344444221  1  


Q ss_pred             HHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhh---cCCC---CCCCCChHhHHHHHHHHhcCCCCCcccc
Q 024145          176 CLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQ---MGNL---KGEFLKTDGIANAALYLASDESSYVSGQ  249 (272)
Q Consensus       176 ~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~---~~~~---~~~~~~~~dva~~~~~l~s~~~~~~~G~  249 (272)
                       ....+...|++++.++||++.+++..       ........   ..+.   ...+.+++|+|+++++++.+...  .|+
T Consensus       124 -~e~~~~~~g~~~~ilrp~~~~~~~~~-------~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~--~g~  193 (289)
T 3e48_A          124 -ASRLLSTSGIDYTYVRMAMYMDPLKP-------YLPELMNMHKLIYPAGDGRINYITRNDIARGVIAIIKNPDT--WGK  193 (289)
T ss_dssp             -HHHHHHHHCCEEEEEEECEESTTHHH-------HHHHHHHHTEECCCCTTCEEEEECHHHHHHHHHHHHHCGGG--TTC
T ss_pred             -HHHHHHHcCCCEEEEeccccccccHH-------HHHHHHHCCCEecCCCCceeeeEEHHHHHHHHHHHHcCCCc--CCc
Confidence             22223346899999999999887542       11111111   1111   12378899999999999976543  299


Q ss_pred             EEEecCceeeccCccc
Q 024145          250 NLVVDGGFSVVNPTVM  265 (272)
Q Consensus       250 ~i~~dgG~~~~~~~~~  265 (272)
                      .|+++ |..+....++
T Consensus       194 ~~~~~-~~~~s~~e~~  208 (289)
T 3e48_A          194 RYLLS-GYSYDMKELA  208 (289)
T ss_dssp             EEEEC-CEEEEHHHHH
T ss_pred             eEEeC-CCcCCHHHHH
Confidence            99999 8777644443

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.81  E-value=3.9e-19  Score=156.31  Aligned_cols=206  Identities=13%  Similarity=0.063  Sum_probs=140.1

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchH--HHHHHHhCCceEEEEec-CCCHHHHHHHHHHHHHHhCCc
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLG--EDLADKLGQDVCYIHCD-ISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~D-~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      ++|+++||||+|+||++++++|+++|++|++++|++...  +.+.+  ..++.++.+| ++|+++++++++       .+
T Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~--~~~v~~v~~D~l~d~~~l~~~~~-------~~   74 (352)
T 1xgk_A            4 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQA--IPNVTLFQGPLLNNVPLMDTLFE-------GA   74 (352)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHT--STTEEEEESCCTTCHHHHHHHHT-------TC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhh--cCCcEEEECCccCCHHHHHHHHh-------cC
Confidence            467899999999999999999999999999999987654  22211  2368899999 999999887665       68


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCC-CceEEEEeccc-ccccCCCCchhhhhHH
Q 024145           91 DIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ-KGCILFTASAC-TEIAGLGSPAYTISKY  168 (272)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~-~~~~~~~~~~Y~~sK~  168 (272)
                      |++|||++....                 +.|..+ ..+++++..    .+ -++||++||.. ...+......|..+|.
T Consensus        75 d~Vi~~a~~~~~-----------------~~~~~~-~~l~~aa~~----~g~v~~~V~~SS~~~~~~~~~~~~~y~~sK~  132 (352)
T 1xgk_A           75 HLAFINTTSQAG-----------------DEIAIG-KDLADAAKR----AGTIQHYIYSSMPDHSLYGPWPAVPMWAPKF  132 (352)
T ss_dssp             SEEEECCCSTTS-----------------CHHHHH-HHHHHHHHH----HSCCSEEEEEECCCGGGTSSCCCCTTTHHHH
T ss_pred             CEEEEcCCCCCc-----------------HHHHHH-HHHHHHHHH----cCCccEEEEeCCccccccCCCCCccHHHHHH
Confidence            999999874210                 124444 555555543    34 46899999986 3444455578999999


Q ss_pred             HHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChh-H--HHHHH--hhc--CCCCCCCCCh-HhHHHHHHHHhc
Q 024145          169 GILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPA-L--IESSM--SQM--GNLKGEFLKT-DGIANAALYLAS  240 (272)
Q Consensus       169 a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~-~--~~~~~--~~~--~~~~~~~~~~-~dva~~~~~l~s  240 (272)
                      +.+.+++.       .|+++++++||++.+........... .  .....  ...  ......+.++ +|+|++++.++.
T Consensus       133 ~~E~~~~~-------~gi~~~ivrpg~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~  205 (352)
T 1xgk_A          133 TVENYVRQ-------LGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFK  205 (352)
T ss_dssp             HHHHHHHT-------SSSCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHH
T ss_pred             HHHHHHHH-------cCCCEEEEecceecCCchhcccccccccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHHh
Confidence            99998875       27999999999775443221000000 0  00000  000  0011246778 899999999886


Q ss_pred             CCCCCccccEEEecCce
Q 024145          241 DESSYVSGQNLVVDGGF  257 (272)
Q Consensus       241 ~~~~~~~G~~i~~dgG~  257 (272)
                      +......|+.|++.++.
T Consensus       206 ~~~~~~~g~~~~l~~~~  222 (352)
T 1xgk_A          206 DGPQKWNGHRIALTFET  222 (352)
T ss_dssp             HCHHHHTTCEEEECSEE
T ss_pred             CCchhhCCeEEEEecCC
Confidence            54333468999998653

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.79  E-value=7.5e-19  Score=149.61  Aligned_cols=200  Identities=7%  Similarity=-0.110  Sum_probs=137.6

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEe
Q 024145           16 KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYN   95 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~   95 (272)
                      +++||||| |+||++++++|+++|++|++++|++.....+..   ..+.++.+|++|.+            ..++|+|||
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~D~~d~~------------~~~~d~vi~   69 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA---SGAEPLLWPGEEPS------------LDGVTHLLI   69 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH---TTEEEEESSSSCCC------------CTTCCEEEE
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh---CCCeEEEecccccc------------cCCCCEEEE
Confidence            68999998 999999999999999999999998876654433   46899999999832            347999999


Q ss_pred             CCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccC-----------CCCchhh
Q 024145           96 NAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAG-----------LGSPAYT  164 (272)
Q Consensus        96 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~-----------~~~~~Y~  164 (272)
                      +|+....  .     .  ..          ...+++++...  ..+-.++|++||.......           .....|+
T Consensus        70 ~a~~~~~--~-----~--~~----------~~~l~~a~~~~--~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~~~Y~  128 (286)
T 3ius_A           70 STAPDSG--G-----D--PV----------LAALGDQIAAR--AAQFRWVGYLSTTAVYGDHDGAWVDETTPLTPTAARG  128 (286)
T ss_dssp             CCCCBTT--B-----C--HH----------HHHHHHHHHHT--GGGCSEEEEEEEGGGGCCCTTCEECTTSCCCCCSHHH
T ss_pred             CCCcccc--c-----c--HH----------HHHHHHHHHhh--cCCceEEEEeecceecCCCCCCCcCCCCCCCCCCHHH
Confidence            9996533  1     0  10          12223333221  1244689999997543221           2234799


Q ss_pred             hhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCC
Q 024145          165 ISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESS  244 (272)
Q Consensus       165 ~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  244 (272)
                      .+|.+.+.+++.+      .|+++++++|+.+.++.................. ......+...+|+|++++.++.... 
T Consensus       129 ~sK~~~E~~~~~~------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~-~~~~~~~i~v~Dva~a~~~~~~~~~-  200 (286)
T 3ius_A          129 RWRVMAEQQWQAV------PNLPLHVFRLAGIYGPGRGPFSKLGKGGIRRIIK-PGQVFSRIHVEDIAQVLAASMARPD-  200 (286)
T ss_dssp             HHHHHHHHHHHHS------TTCCEEEEEECEEEBTTBSSSTTSSSSCCCEEEC-TTCCBCEEEHHHHHHHHHHHHHSCC-
T ss_pred             HHHHHHHHHHHhh------cCCCEEEEeccceECCCchHHHHHhcCCccccCC-CCcccceEEHHHHHHHHHHHHhCCC-
Confidence            9999999988877      5899999999999987643210000000000000 0112467788999999999997654 


Q ss_pred             CccccEEEecCceeeccC
Q 024145          245 YVSGQNLVVDGGFSVVNP  262 (272)
Q Consensus       245 ~~~G~~i~~dgG~~~~~~  262 (272)
                        .|+.|++.+|..++..
T Consensus       201 --~g~~~~i~~~~~~s~~  216 (286)
T 3ius_A          201 --PGAVYNVCDDEPVPPQ  216 (286)
T ss_dssp             --TTCEEEECCSCCBCHH
T ss_pred             --CCCEEEEeCCCCccHH
Confidence              6899999998765433

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.78  E-value=4.9e-19  Score=156.40  Aligned_cols=197  Identities=16%  Similarity=0.035  Sum_probs=144.6

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEe
Q 024145           17 VAIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYN   95 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~   95 (272)
                      ++|||||+|+||++++++|+++|+ +|+..+|+                      +|+++++++++       ++|+|||
T Consensus         2 ~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~----------------------~d~~~l~~~~~-------~~d~Vih   52 (369)
T 3st7_A            2 NIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ----------------------TKEEELESALL-------KADFIVH   52 (369)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT----------------------CCHHHHHHHHH-------HCSEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC----------------------CCHHHHHHHhc-------cCCEEEE
Confidence            699999999999999999999998 77766553                      77888887776       4899999


Q ss_pred             CCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCC-ceEEEEecccccccCCCCchhhhhHHHHHHHH
Q 024145           96 NAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQK-GCILFTASACTEIAGLGSPAYTISKYGILGLV  174 (272)
Q Consensus        96 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~~  174 (272)
                      +||....          ++....+++|+.++..+++++..    .+. .++|++||.....    ...|+.+|.+.+.++
T Consensus        53 ~a~~~~~----------~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~~v~~Ss~~~~~----~~~Y~~sK~~~E~~~  114 (369)
T 3st7_A           53 LAGVNRP----------EHDKEFSLGNVSYLDHVLDILTR----NTKKPAILLSSSIQATQ----DNPYGESKLQGEQLL  114 (369)
T ss_dssp             CCCSBCT----------TCSTTCSSSCCBHHHHHHHHHTT----CSSCCEEEEEEEGGGGS----CSHHHHHHHHHHHHH
T ss_pred             CCcCCCC----------CCHHHHHHHHHHHHHHHHHHHHH----hCCCCeEEEeCchhhcC----CCCchHHHHHHHHHH
Confidence            9997543          12334577899999998887743    332 3899999987654    678999999999999


Q ss_pred             HHHHHHhcCCCcEEEEEeCCcccCCcccCCCCC--hhHHHHHHhhcCCC------CCCCCChHhHHHHHHHHhcCCCCCc
Q 024145          175 KCLAAELGQYGIRVNCVSPYGLATGMSMKGGVD--PALIESSMSQMGNL------KGEFLKTDGIANAALYLASDESSYV  246 (272)
Q Consensus       175 ~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~------~~~~~~~~dva~~~~~l~s~~~~~~  246 (272)
                      +.++.+.   |+++..++|+.+.++........  ..............      ...+..++|+|++++.++..... .
T Consensus       115 ~~~~~~~---g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~-~  190 (369)
T 3st7_A          115 REYAEEY---GNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKRAIEGTPT-I  190 (369)
T ss_dssp             HHHHHHH---CCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCCSCTTCEEEEEEHHHHHHHHHHHHHTCCC-E
T ss_pred             HHHHHHh---CCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEecCCCeEEEEEEHHHHHHHHHHHHhCCcc-c
Confidence            9999884   78999999999998865431111  11122222211111      12466799999999999876542 2


Q ss_pred             cccEEEecCceeeccCcc
Q 024145          247 SGQNLVVDGGFSVVNPTV  264 (272)
Q Consensus       247 ~G~~i~~dgG~~~~~~~~  264 (272)
                      .|+.+++.+|..+....+
T Consensus       191 ~~~~~~i~~~~~~s~~e~  208 (369)
T 3st7_A          191 ENGVPTVPNVFKVTLGEI  208 (369)
T ss_dssp             ETTEECCSCCEEEEHHHH
T ss_pred             CCceEEeCCCCceeHHHH
Confidence            489999999877654443

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.76  E-value=4.9e-18  Score=145.92  Aligned_cols=202  Identities=13%  Similarity=0.077  Sum_probs=131.3

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCc-------chHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGAKVVIADVQD-------KLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      +++++||||+|+||++++++|+++|++|++++|+.       +..+.+.+.....+.++.+|++|++++.++++      
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~------   75 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIK------   75 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHT------
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHh------
Confidence            46899999999999999999999999999999986       33332221113468899999999999877765      


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCC-CceEEEEecccccc------cCCCC
Q 024145           88 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ-KGCILFTASACTEI------AGLGS  160 (272)
Q Consensus        88 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~------~~~~~  160 (272)
                       ++|+|||++|...                     +.+...+++++..    .+ -+++|+  |..+..      ..+..
T Consensus        76 -~~d~vi~~a~~~~---------------------~~~~~~l~~aa~~----~g~v~~~v~--S~~g~~~~~~~~~~p~~  127 (307)
T 2gas_A           76 -QVDIVICAAGRLL---------------------IEDQVKIIKAIKE----AGNVKKFFP--SEFGLDVDRHDAVEPVR  127 (307)
T ss_dssp             -TCSEEEECSSSSC---------------------GGGHHHHHHHHHH----HCCCSEEEC--SCCSSCTTSCCCCTTHH
T ss_pred             -CCCEEEECCcccc---------------------cccHHHHHHHHHh----cCCceEEee--cccccCcccccCCCcch
Confidence             6999999998531                     2234445555433    33 456763  433321      12223


Q ss_pred             chhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCCh--hHHHHHHh--hcCCCCCCCCChHhHHHHHH
Q 024145          161 PAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDP--ALIESSMS--QMGNLKGEFLKTDGIANAAL  236 (272)
Q Consensus       161 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~~~~dva~~~~  236 (272)
                      ..| .+|.+++.+++.       .|++++.++||++.+++........  ........  ........+.+++|+|+++.
T Consensus       128 ~~y-~sK~~~e~~~~~-------~~i~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  199 (307)
T 2gas_A          128 QVF-EEKASIRRVIEA-------EGVPYTYLCCHAFTGYFLRNLAQLDATDPPRDKVVILGDGNVKGAYVTEADVGTFTI  199 (307)
T ss_dssp             HHH-HHHHHHHHHHHH-------HTCCBEEEECCEETTTTGGGTTCTTCSSCCSSEEEEETTSCSEEEEECHHHHHHHHH
T ss_pred             hHH-HHHHHHHHHHHH-------cCCCeEEEEcceeeccccccccccccccCCCCeEEEecCCCcceEEeeHHHHHHHHH
Confidence            578 999999887753       3789999999999886543110000  00000000  00111245678999999999


Q ss_pred             HHhcCCCCCccccEEEecC-ceeec
Q 024145          237 YLASDESSYVSGQNLVVDG-GFSVV  260 (272)
Q Consensus       237 ~l~s~~~~~~~G~~i~~dg-G~~~~  260 (272)
                      .++.++.  ..|+.+++.| |..+.
T Consensus       200 ~~l~~~~--~~~~~~~~~~~~~~~s  222 (307)
T 2gas_A          200 RAANDPN--TLNKAVHIRLPKNYLT  222 (307)
T ss_dssp             HHHTCGG--GTTEEEECCCGGGEEE
T ss_pred             HHHcCcc--ccCceEEEeCCCCcCC
Confidence            9987543  2477787765 34443

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.76  E-value=5.4e-18  Score=148.41  Aligned_cols=209  Identities=11%  Similarity=0.041  Sum_probs=138.7

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcc----hHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDK----LGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      +..+++|||||||+||++++++|+++|++|++++|+..    ..+.+.+....++.++.+|++|.+++.+++++.     
T Consensus         8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~-----   82 (346)
T 3i6i_A            8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEH-----   82 (346)
T ss_dssp             ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHT-----
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhC-----
Confidence            34678999999999999999999999999999999762    222222222467899999999999988877653     


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccc----cCCCCchhh
Q 024145           89 KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEI----AGLGSPAYT  164 (272)
Q Consensus        89 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~----~~~~~~~Y~  164 (272)
                      ++|+|||++|..                     |+.+...+++++...-   .-.++|+ |+.....    +......|.
T Consensus        83 ~~d~Vi~~a~~~---------------------n~~~~~~l~~aa~~~g---~v~~~v~-S~~g~~~~e~~~~~p~~~y~  137 (346)
T 3i6i_A           83 EIDIVVSTVGGE---------------------SILDQIALVKAMKAVG---TIKRFLP-SEFGHDVNRADPVEPGLNMY  137 (346)
T ss_dssp             TCCEEEECCCGG---------------------GGGGHHHHHHHHHHHC---CCSEEEC-SCCSSCTTTCCCCTTHHHHH
T ss_pred             CCCEEEECCchh---------------------hHHHHHHHHHHHHHcC---CceEEee-cccCCCCCccCcCCCcchHH
Confidence            699999999851                     7777888888776532   1345664 4322211    123445899


Q ss_pred             hhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhH--HHHHH--hhcCCCCCCCCChHhHHHHHHHHhc
Q 024145          165 ISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPAL--IESSM--SQMGNLKGEFLKTDGIANAALYLAS  240 (272)
Q Consensus       165 ~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~~dva~~~~~l~s  240 (272)
                      .+|.+++.+.+.       .|+.+..++||++.+............  .....  .........+.+++|+|++++.++.
T Consensus       138 ~sK~~~e~~l~~-------~g~~~tivrpg~~~g~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~  210 (346)
T 3i6i_A          138 REKRRVRQLVEE-------SGIPFTYICCNSIASWPYYNNIHPSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVD  210 (346)
T ss_dssp             HHHHHHHHHHHH-------TTCCBEEEECCEESSCCCSCC-----CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHH-------cCCCEEEEEecccccccCccccccccccCCCceEEEccCCCceEEecCHHHHHHHHHHHHh
Confidence            999998887764       479999999998887553311100000  00000  0001112457889999999999987


Q ss_pred             CCCCCccccEEEecC-ceeec
Q 024145          241 DESSYVSGQNLVVDG-GFSVV  260 (272)
Q Consensus       241 ~~~~~~~G~~i~~dg-G~~~~  260 (272)
                      +..  ..|+.+++.| |..+.
T Consensus       211 ~~~--~~~~~~~i~g~~~~~s  229 (346)
T 3i6i_A          211 DVR--TLNKSVHFRPSCNCLN  229 (346)
T ss_dssp             CGG--GTTEEEECCCGGGEEC
T ss_pred             Ccc--ccCeEEEEeCCCCCCC
Confidence            642  2467777764 45544

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.75  E-value=1.6e-17  Score=146.05  Aligned_cols=216  Identities=13%  Similarity=0.041  Sum_probs=145.0

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcC-----CeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024145           15 GKVAIITGGASGIGAMAVELFHENG-----AKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGK   89 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G-----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (272)
                      +|++|||||+|+||++++++|+++|     ++|++++|+.....    ....++.++.+|++|.++++++++..    ++
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~----~~~~~~~~~~~Dl~d~~~~~~~~~~~----~~   72 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW----HEDNPINYVQCDISDPDDSQAKLSPL----TD   72 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC----CCSSCCEEEECCTTSHHHHHHHHTTC----TT
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc----cccCceEEEEeecCCHHHHHHHHhcC----CC
Confidence            5789999999999999999999999     99999999866432    11346889999999999887766522    23


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEE-------EEecccccccC-----
Q 024145           90 LDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCIL-------FTASACTEIAG-----  157 (272)
Q Consensus        90 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv-------~iss~~~~~~~-----  157 (272)
                      +|+|||+||...           ++..+.+++|+.++..+++++.+...  +-.++|       ++||.......     
T Consensus        73 ~d~vih~a~~~~-----------~~~~~~~~~n~~~~~~l~~a~~~~~~--~~~~~v~~~g~~i~~Ss~~vyg~~~~~~~  139 (364)
T 2v6g_A           73 VTHVFYVTWANR-----------STEQENCEANSKMFRNVLDAVIPNCP--NLKHISLQTGRKHYMGPFESYGKIESHDP  139 (364)
T ss_dssp             CCEEEECCCCCC-----------SSHHHHHHHHHHHHHHHHHHHTTTCT--TCCEEEEECCTHHHHCCGGGTTTSCCCCS
T ss_pred             CCEEEECCCCCc-----------chHHHHHHHhHHHHHHHHHHHHHhcc--ccceEEeccCceEEEechhhccccccCCC
Confidence            999999999642           13567889999999999998876421  234565       67776432110     


Q ss_pred             ---------CCCchhhhhHHHHHHHHHHHHHHhcCCC-cEEEEEeCCcccCCcccCCCCC--hhHHHHHH---hhcC-CC
Q 024145          158 ---------LGSPAYTISKYGILGLVKCLAAELGQYG-IRVNCVSPYGLATGMSMKGGVD--PALIESSM---SQMG-NL  221 (272)
Q Consensus       158 ---------~~~~~Y~~sK~a~~~~~~~la~e~~~~g-i~v~~i~Pg~v~t~~~~~~~~~--~~~~~~~~---~~~~-~~  221 (272)
                               +....|    .+.+.+++.++.+   +| +++.+++|+.+.+|........  +..+...+   .... ..
T Consensus       140 ~~~E~~~~~~~~~~y----~~~E~~~~~~~~~---~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  212 (364)
T 2v6g_A          140 PYTEDLPRLKYMNFY----YDLEDIMLEEVEK---KEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRF  212 (364)
T ss_dssp             SBCTTSCCCSSCCHH----HHHHHHHHHHHTT---STTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCC
T ss_pred             CCCccccCCccchhh----HHHHHHHHHHhhc---CCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceec
Confidence                     112346    3455555555433   45 9999999999998865421110  01112222   1111 11


Q ss_pred             CC---------CCCChHhHHHHHHHHhcCCCCCccccEEEecCceeec
Q 024145          222 KG---------EFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       222 ~~---------~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~  260 (272)
                      .+         .+.+.+|+|++++.++....  ..|+.|++.+|..+.
T Consensus       213 ~g~~~~~~~~~~~~~v~Dva~a~~~~~~~~~--~~g~~~ni~~~~~~s  258 (364)
T 2v6g_A          213 TGCKAAWDGYSDCSDADLIAEHHIWAAVDPY--AKNEAFNVSNGDVFK  258 (364)
T ss_dssp             CSCHHHHHSCBCCEEHHHHHHHHHHHHHCGG--GTTEEEEECCSCCBC
T ss_pred             CCCcccccccCCCCcHHHHHHHHHHHHhCCC--CCCceEEecCCCcCC
Confidence            11         23344889999998886432  368999999886544

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.75  E-value=5.8e-18  Score=145.87  Aligned_cols=206  Identities=12%  Similarity=0.051  Sum_probs=134.7

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcc-----hHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGAKVVIADVQDK-----LGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGK   89 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~-----~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (272)
                      .++++||||||+||++++++|+++|++|++++|+..     ..+.+.+....++.++.+|++|++++.++++       +
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~-------~   76 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALK-------Q   76 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHT-------T
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHh-------C
Confidence            367999999999999999999999999999999853     2222222124578999999999999887765       6


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCC-CceEEEEeccccc-cc------CCCCc
Q 024145           90 LDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ-KGCILFTASACTE-IA------GLGSP  161 (272)
Q Consensus        90 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~-~~------~~~~~  161 (272)
                      +|+|||+++....  .               .|+.+...+++++..    .+ -+++|+ | ..+. ..      .+...
T Consensus        77 ~d~vi~~a~~~~~--~---------------~~~~~~~~l~~aa~~----~g~v~~~v~-S-~~g~~~~~~~~~~~p~~~  133 (313)
T 1qyd_A           77 VDVVISALAGGVL--S---------------HHILEQLKLVEAIKE----AGNIKRFLP-S-EFGMDPDIMEHALQPGSI  133 (313)
T ss_dssp             CSEEEECCCCSSS--S---------------TTTTTHHHHHHHHHH----SCCCSEEEC-S-CCSSCTTSCCCCCSSTTH
T ss_pred             CCEEEECCccccc--h---------------hhHHHHHHHHHHHHh----cCCCceEEe-c-CCcCCccccccCCCCCcc
Confidence            9999999986532  1               155666666666644    33 457774 3 3331 11      13345


Q ss_pred             hhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCCh--h-HHHHHHhh--cCCCCCCCCChHhHHHHHH
Q 024145          162 AYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDP--A-LIESSMSQ--MGNLKGEFLKTDGIANAAL  236 (272)
Q Consensus       162 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~--~-~~~~~~~~--~~~~~~~~~~~~dva~~~~  236 (272)
                      .| .+|.+++.+.+    +   .|+.+..++||++.+++........  . ........  .......+.+++|+|+++.
T Consensus       134 ~y-~sK~~~e~~~~----~---~g~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~  205 (313)
T 1qyd_A          134 TF-IDKRKVRRAIE----A---ASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTI  205 (313)
T ss_dssp             HH-HHHHHHHHHHH----H---TTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHH
T ss_pred             hH-HHHHHHHHHHH----h---cCCCeEEEEeceeccccccccccccccccCCCCeEEEeCCCCceEEEEEHHHHHHHHH
Confidence            78 99999988775    2   4788999999988765432110000  0 00000000  0011135678999999999


Q ss_pred             HHhcCCCCCccccEEEecC-ceeec
Q 024145          237 YLASDESSYVSGQNLVVDG-GFSVV  260 (272)
Q Consensus       237 ~l~s~~~~~~~G~~i~~dg-G~~~~  260 (272)
                      .++.++.  ..|+.+++.| |..+.
T Consensus       206 ~~l~~~~--~~~~~~~~~g~~~~~s  228 (313)
T 1qyd_A          206 KSIDDPQ--TLNKTMYIRPPMNILS  228 (313)
T ss_dssp             HHTTCGG--GSSSEEECCCGGGEEE
T ss_pred             HHHhCcc--cCCceEEEeCCCCccC
Confidence            9887543  2477777765 34443

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.73  E-value=3.6e-17  Score=150.72  Aligned_cols=208  Identities=14%  Similarity=0.041  Sum_probs=140.8

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEE
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMY   94 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv   94 (272)
                      ++++|||||+|+||++++++|+++|++|++++|+....+           .+.+|+.+..         .+.+.++|+||
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~-----------~v~~d~~~~~---------~~~l~~~D~Vi  206 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPG-----------KRFWDPLNPA---------SDLLDGADVLV  206 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTT-----------CEECCTTSCC---------TTTTTTCSEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCcc-----------ceeecccchh---------HHhcCCCCEEE
Confidence            679999999999999999999999999999999876421           2567776421         22334799999


Q ss_pred             eCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccc-----------cCCCCchh
Q 024145           95 NNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEI-----------AGLGSPAY  163 (272)
Q Consensus        95 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~-----------~~~~~~~Y  163 (272)
                      |+||....     ...+.+.....+++|+.++..+++++..   +.+.+++|++||...+.           .......|
T Consensus       207 h~A~~~~~-----~~~~~~~~~~~~~~Nv~gt~~ll~a~a~---~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~~~~~y  278 (516)
T 3oh8_A          207 HLAGEPIF-----GRFNDSHKEAIRESRVLPTKFLAELVAE---STQCTTMISASAVGFYGHDRGDEILTEESESGDDFL  278 (516)
T ss_dssp             ECCCC----------CCGGGHHHHHHHTHHHHHHHHHHHHH---CSSCCEEEEEEEGGGGCSEEEEEEECTTSCCCSSHH
T ss_pred             ECCCCccc-----cccchhHHHHHHHHHHHHHHHHHHHHHh---cCCCCEEEEeCcceEecCCCCCCccCCCCCCCcChH
Confidence            99997532     1345566788999999999999997442   23456899999975432           01134568


Q ss_pred             hhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHH-hhcCC------CCCCCCChHhHHHHHH
Q 024145          164 TISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSM-SQMGN------LKGEFLKTDGIANAAL  236 (272)
Q Consensus       164 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~-~~~~~------~~~~~~~~~dva~~~~  236 (272)
                      +.+|...+.+.+.+    ...|+++++++||.+.++...    ....+.... .....      ....++.++|+|++++
T Consensus       279 ~~~~~~~E~~~~~~----~~~gi~~~ilRp~~v~Gp~~~----~~~~~~~~~~~g~~~~~g~g~~~~~~i~v~Dva~ai~  350 (516)
T 3oh8_A          279 AEVCRDWEHATAPA----SDAGKRVAFIRTGVALSGRGG----MLPLLKTLFSTGLGGKFGDGTSWFSWIAIDDLTDIYY  350 (516)
T ss_dssp             HHHHHHHHHTTHHH----HHTTCEEEEEEECEEEBTTBS----HHHHHHHTTC---CCCCTTSCCEECEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH----HhCCCCEEEEEeeEEECCCCC----hHHHHHHHHHhCCCcccCCCCceEceEeHHHHHHHHH
Confidence            88888877665432    336899999999999987621    011111111 10011      1135678899999999


Q ss_pred             HHhcCCCCCccccEEEecCceeecc
Q 024145          237 YLASDESSYVSGQNLVVDGGFSVVN  261 (272)
Q Consensus       237 ~l~s~~~~~~~G~~i~~dgG~~~~~  261 (272)
                      .++....  ..| .+++.++..+..
T Consensus       351 ~~l~~~~--~~g-~~ni~~~~~~s~  372 (516)
T 3oh8_A          351 RAIVDAQ--ISG-PINAVAPNPVSN  372 (516)
T ss_dssp             HHHHCTT--CCE-EEEESCSCCEEH
T ss_pred             HHHhCcc--cCC-cEEEECCCCCCH
Confidence            9987543  234 677777765543

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.71  E-value=2.8e-18  Score=148.48  Aligned_cols=201  Identities=12%  Similarity=-0.004  Sum_probs=129.2

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCc-c-----hHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGAKVVIADVQD-K-----LGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~-~-----~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      .++++||||+|+||++++++|+++|++|++++|+. .     ..+.+.+.....+.++.+|++|++++.++++       
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~-------   76 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLK-------   76 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHT-------
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHc-------
Confidence            36799999999999999999999999999999986 1     2222211123568899999999999887765       


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCC-CceEEEEeccccccc---C---CCCc
Q 024145           89 KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ-KGCILFTASACTEIA---G---LGSP  161 (272)
Q Consensus        89 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~---~---~~~~  161 (272)
                      ++|+|||+++...                     +.+...+++++..    .+ -++||  .|..+...   .   +...
T Consensus        77 ~~d~vi~~a~~~~---------------------~~~~~~l~~aa~~----~g~v~~~v--~S~~g~~~~~~~~~~p~~~  129 (321)
T 3c1o_A           77 QVDIVISALPFPM---------------------ISSQIHIINAIKA----AGNIKRFL--PSDFGCEEDRIKPLPPFES  129 (321)
T ss_dssp             TCSEEEECCCGGG---------------------SGGGHHHHHHHHH----HCCCCEEE--CSCCSSCGGGCCCCHHHHH
T ss_pred             CCCEEEECCCccc---------------------hhhHHHHHHHHHH----hCCccEEe--ccccccCccccccCCCcch
Confidence            6899999998531                     2334445554443    33 45676  34333211   1   1134


Q ss_pred             hhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccC---CC--CChhHHHHHHhhcCCCCCCCCChHhHHHHHH
Q 024145          162 AYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMK---GG--VDPALIESSMSQMGNLKGEFLKTDGIANAAL  236 (272)
Q Consensus       162 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  236 (272)
                      .| .+|.+++.+++.       .|+.+..++||++.++....   ..  .......... ........+.+++|+|+++.
T Consensus       130 ~y-~sK~~~e~~~~~-------~~~~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~Dva~~~~  200 (321)
T 3c1o_A          130 VL-EKKRIIRRAIEA-------AALPYTYVSANCFGAYFVNYLLHPSPHPNRNDDIVIY-GTGETKFVLNYEEDIAKYTI  200 (321)
T ss_dssp             HH-HHHHHHHHHHHH-------HTCCBEEEECCEEHHHHHHHHHCCCSSCCTTSCEEEE-TTSCCEEEEECHHHHHHHHH
T ss_pred             HH-HHHHHHHHHHHH-------cCCCeEEEEeceeccccccccccccccccccCceEEe-cCCCcceeEeeHHHHHHHHH
Confidence            79 999999988763       36888899999886643210   00  0000000000 00111245788999999999


Q ss_pred             HHhcCCCCCccccEEEecC-ceeec
Q 024145          237 YLASDESSYVSGQNLVVDG-GFSVV  260 (272)
Q Consensus       237 ~l~s~~~~~~~G~~i~~dg-G~~~~  260 (272)
                      .++.++.  ..|+.+++.| |..+.
T Consensus       201 ~~l~~~~--~~g~~~~~~g~~~~~t  223 (321)
T 3c1o_A          201 KVACDPR--CCNRIVIYRPPKNIIS  223 (321)
T ss_dssp             HHHHCGG--GTTEEEECCCGGGEEE
T ss_pred             HHHhCcc--ccCeEEEEeCCCCccc
Confidence            9987643  2478888876 45544

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.69  E-value=4.6e-17  Score=139.88  Aligned_cols=203  Identities=13%  Similarity=0.106  Sum_probs=128.5

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcch------HHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKL------GEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~------~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      .|+++||||+|+||++++++|+++|++|++++|+...      .+.+.......+.++.+|++|++++.++++       
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~-------   76 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVK-------   76 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHH-------
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHc-------
Confidence            4679999999999999999999999999999997532      111111124578999999999999887776       


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCC-CceEEEEeccccccc-----CCCCch
Q 024145           89 KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ-KGCILFTASACTEIA-----GLGSPA  162 (272)
Q Consensus        89 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~-----~~~~~~  162 (272)
                      ++|+|||+++...                     +.+...+++++..    .+ -+++|+ |+......     .+....
T Consensus        77 ~~d~vi~~a~~~~---------------------~~~~~~l~~aa~~----~g~v~~~v~-S~~g~~~~~~~~~~p~~~~  130 (308)
T 1qyc_A           77 NVDVVISTVGSLQ---------------------IESQVNIIKAIKE----VGTVKRFFP-SEFGNDVDNVHAVEPAKSV  130 (308)
T ss_dssp             TCSEEEECCCGGG---------------------SGGGHHHHHHHHH----HCCCSEEEC-SCCSSCTTSCCCCTTHHHH
T ss_pred             CCCEEEECCcchh---------------------hhhHHHHHHHHHh----cCCCceEee-cccccCccccccCCcchhH
Confidence            6899999998531                     2233444454443    23 456763 43221111     122346


Q ss_pred             hhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCCh--hHHHHHHh--hcCCCCCCCCChHhHHHHHHHH
Q 024145          163 YTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDP--ALIESSMS--QMGNLKGEFLKTDGIANAALYL  238 (272)
Q Consensus       163 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~~~~dva~~~~~l  238 (272)
                      | .+|.+++.+++.       .|+.+..++||++.+.+........  ........  ........+.+++|+++++..+
T Consensus       131 y-~sK~~~e~~~~~-------~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  202 (308)
T 1qyc_A          131 F-EVKAKVRRAIEA-------EGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKA  202 (308)
T ss_dssp             H-HHHHHHHHHHHH-------HTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTT
T ss_pred             H-HHHHHHHHHHHh-------cCCCeEEEEeceeccccccccccccccCCCCCceEEecCCCceEEEecHHHHHHHHHHH
Confidence            8 999999887763       3688889999988765432110000  00000000  0011124567899999999998


Q ss_pred             hcCCCCCccccEEEecC-ceeec
Q 024145          239 ASDESSYVSGQNLVVDG-GFSVV  260 (272)
Q Consensus       239 ~s~~~~~~~G~~i~~dg-G~~~~  260 (272)
                      +.+..  ..|+.+++.| |..++
T Consensus       203 l~~~~--~~~~~~~~~g~~~~~s  223 (308)
T 1qyc_A          203 VDDPR--TLNKTLYLRLPANTLS  223 (308)
T ss_dssp             SSCGG--GTTEEEECCCGGGEEE
T ss_pred             HhCcc--ccCeEEEEeCCCCccC
Confidence            86542  2467777765 34443

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.67  E-value=1.4e-17  Score=144.00  Aligned_cols=199  Identities=13%  Similarity=0.040  Sum_probs=127.0

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcc-hHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEE
Q 024145           16 KVAIITGGASGIGAMAVELFHENGAKVVIADVQDK-LGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMY   94 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv   94 (272)
                      |++|||||+|+||++++++|+++|++|++++|+.. ..+.+.+.....+.++.+|++|++++.++++       ++|+||
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~-------~~d~vi   84 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMK-------KVDVVI   84 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHT-------TCSEEE
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHc-------CCCEEE
Confidence            57999999999999999999999999999999875 3322221113468899999999999887765       699999


Q ss_pred             eCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCC-CceEEEEeccccccc---C---CCCchhhhhH
Q 024145           95 NNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ-KGCILFTASACTEIA---G---LGSPAYTISK  167 (272)
Q Consensus        95 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~---~---~~~~~Y~~sK  167 (272)
                      |+++...                     +.+...+++++..    .+ -+++|+ | ..+...   .   +....| .+|
T Consensus        85 ~~a~~~~---------------------~~~~~~l~~aa~~----~g~v~~~v~-S-~~g~~~~~~~~~~p~~~~y-~sK  136 (318)
T 2r6j_A           85 SALAFPQ---------------------ILDQFKILEAIKV----AGNIKRFLP-S-DFGVEEDRINALPPFEALI-ERK  136 (318)
T ss_dssp             ECCCGGG---------------------STTHHHHHHHHHH----HCCCCEEEC-S-CCSSCTTTCCCCHHHHHHH-HHH
T ss_pred             ECCchhh---------------------hHHHHHHHHHHHh----cCCCCEEEe-e-ccccCcccccCCCCcchhH-HHH
Confidence            9998531                     2233444444433    23 456764 3 333111   1   112468 999


Q ss_pred             HHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccC---CCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCC
Q 024145          168 YGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMK---GGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESS  244 (272)
Q Consensus       168 ~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  244 (272)
                      .+++.+++.       .|+.+..++||++...+...   ........ ... ........+.+++|+++++..++.++..
T Consensus       137 ~~~e~~~~~-------~~~~~~~lr~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~i~~~Dva~~~~~~l~~~~~  207 (318)
T 2r6j_A          137 RMIRRAIEE-------ANIPYTYVSANCFASYFINYLLRPYDPKDEI-TVY-GTGEAKFAMNYEQDIGLYTIKVATDPRA  207 (318)
T ss_dssp             HHHHHHHHH-------TTCCBEEEECCEEHHHHHHHHHCTTCCCSEE-EEE-TTSCCEEEEECHHHHHHHHHHHTTCGGG
T ss_pred             HHHHHHHHh-------cCCCeEEEEcceehhhhhhhhccccCCCCce-EEe-cCCCceeeEeeHHHHHHHHHHHhcCccc
Confidence            998887753       47888999999876543210   00000000 000 0011124567899999999999875432


Q ss_pred             CccccEEEecC-ceeec
Q 024145          245 YVSGQNLVVDG-GFSVV  260 (272)
Q Consensus       245 ~~~G~~i~~dg-G~~~~  260 (272)
                        .|+.+++.| |..+.
T Consensus       208 --~~~~~~~~g~~~~~s  222 (318)
T 2r6j_A          208 --LNRVVIYRPSTNIIT  222 (318)
T ss_dssp             --TTEEEECCCGGGEEE
T ss_pred             --cCeEEEecCCCCccC
Confidence              367777765 45444

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.59  E-value=4.4e-14  Score=120.89  Aligned_cols=209  Identities=16%  Similarity=0.053  Sum_probs=131.8

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEeC
Q 024145           17 VAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNN   96 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~   96 (272)
                      ++|||||||.||++++++|.++|++|+++.|++...         .   +..|     ..      ..+...++|.+||.
T Consensus         2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~---------~---~~~~-----~~------~~~~l~~~d~vihl   58 (298)
T 4b4o_A            2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPG---------R---ITWD-----EL------AASGLPSCDAAVNL   58 (298)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT---------E---EEHH-----HH------HHHCCCSCSEEEEC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcC---------e---eecc-----hh------hHhhccCCCEEEEe
Confidence            599999999999999999999999999999976431         1   1222     11      11234579999999


Q ss_pred             CCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccC-----------CCCchhhh
Q 024145           97 AGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAG-----------LGSPAYTI  165 (272)
Q Consensus        97 ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~-----------~~~~~Y~~  165 (272)
                      ||....  ......+.+..+..++.|+.++..+.+.+...-  .+..++|+.||.......           .....|+.
T Consensus        59 a~~~i~--~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~--~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~~~~~~  134 (298)
T 4b4o_A           59 AGENIL--NPLRRWNETFQKEVLGSRLETTQLLAKAITKAP--QPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDFDFFSN  134 (298)
T ss_dssp             CCCCSS--CTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCS--SCCSEEEEEEEGGGSCCCSSCCBCTTCCCSCSSHHHH
T ss_pred             ccCccc--chhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhC--CCceEEEEEeeeeeecCCCCCcccccCCccccchhHH
Confidence            985432  333445677778899999999988887665422  234556777776543221           12223444


Q ss_pred             hHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcC------CCCCCCCChHhHHHHHHHHh
Q 024145          166 SKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMG------NLKGEFLKTDGIANAALYLA  239 (272)
Q Consensus       166 sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~dva~~~~~l~  239 (272)
                      .|...+.     +......++++..+.|+.+..|...   ..............      .....+...+|+++++++++
T Consensus       135 ~~~~~e~-----~~~~~~~~~~~~~~r~~~v~g~~~~---~~~~~~~~~~~~~~~~~g~g~~~~~~ihv~Dva~a~~~~~  206 (298)
T 4b4o_A          135 LVTKWEA-----AARLPGDSTRQVVVRSGVVLGRGGG---AMGHMLLPFRLGLGGPIGSGHQFFPWIHIGDLAGILTHAL  206 (298)
T ss_dssp             HHHHHHH-----HHCCSSSSSEEEEEEECEEECTTSH---HHHHHHHHHHTTCCCCBTTSCSBCCEEEHHHHHHHHHHHH
T ss_pred             HHHHHHH-----HHHhhccCCceeeeeeeeEEcCCCC---chhHHHHHHhcCCcceecccCceeecCcHHHHHHHHHHHH
Confidence            4444332     2234567899999999999887421   11111111111111      11234567899999999988


Q ss_pred             cCCCCCccccEEEecCceeeccCc
Q 024145          240 SDESSYVSGQNLVVDGGFSVVNPT  263 (272)
Q Consensus       240 s~~~~~~~G~~i~~dgG~~~~~~~  263 (272)
                      ..+.  ..| .+++.++..+..-.
T Consensus       207 ~~~~--~~g-~yn~~~~~~~t~~e  227 (298)
T 4b4o_A          207 EANH--VHG-VLNGVAPSSATNAE  227 (298)
T ss_dssp             HCTT--CCE-EEEESCSCCCBHHH
T ss_pred             hCCC--CCC-eEEEECCCccCHHH
Confidence            6543  234 88888877664433

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.37  E-value=5.9e-14  Score=119.74  Aligned_cols=109  Identities=17%  Similarity=0.212  Sum_probs=80.4

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhC--CceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLG--QDVCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      .+++||++|||||+||||+++++.|+++|++|++++|+.++.+++.+++.  ..+.++.+|+++.++++++++       
T Consensus       115 ~~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------  187 (287)
T 1lu9_A          115 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVK-------  187 (287)
T ss_dssp             SCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTT-------
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHH-------
Confidence            35789999999999999999999999999999999999887777665542  146678899999998876655       


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCH-HHHHHHHHHHhHHHH
Q 024145           89 KLDIMYNNAGILDRSFGSILDTPK-SDLERLINVNTIGGF  127 (272)
Q Consensus        89 ~id~lv~~ag~~~~~~~~~~~~~~-~~~~~~~~~n~~~~~  127 (272)
                      .+|+||||+|..... .+..+.+. +++..++++|+.+++
T Consensus       188 ~~DvlVn~ag~g~~~-~~~~~~~~~~~~~~~~dvn~~~~~  226 (287)
T 1lu9_A          188 GAHFVFTAGAIGLEL-LPQAAWQNESSIEIVADYNAQPPL  226 (287)
T ss_dssp             TCSEEEECCCTTCCS-BCHHHHTTCTTCCEEEECCCSSSC
T ss_pred             hCCEEEECCCccccC-CChhHcCchHHHHHHHHhhhhhhH
Confidence            589999999864221 11111221 334446666666654

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.30  E-value=3.2e-12  Score=110.98  Aligned_cols=163  Identities=12%  Similarity=0.036  Sum_probs=108.2

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCC-------eEEEeecCcc--hHHHHHHHh-CCceEEEEecCCCHHHHHHHHHHHHH
Q 024145           16 KVAIITGGASGIGAMAVELFHENGA-------KVVIADVQDK--LGEDLADKL-GQDVCYIHCDISNEDEVINLVDTAVS   85 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~-------~V~~~~r~~~--~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (272)
                      .+++||||+|+||.+++..|+++|+       +|+++++.+.  ..+.....+ ...+.++ .|+.+.+++.+.+     
T Consensus         5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~-~di~~~~~~~~a~-----   78 (327)
T 1y7t_A            5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLL-AGLEATDDPKVAF-----   78 (327)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTE-EEEEEESCHHHHT-----
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhccccccc-CCeEeccChHHHh-----
Confidence            4799999999999999999999996       7999988642  222211122 1111222 4665544443333     


Q ss_pred             HhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccc-------cc--c
Q 024145           86 KFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACT-------EI--A  156 (272)
Q Consensus        86 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~-------~~--~  156 (272)
                        .+.|++||.||....+     ..+   ..+.++.|+.++..+++++..+-  ....+++++|+...       ..  +
T Consensus        79 --~~~D~Vih~Ag~~~~~-----~~~---~~~~~~~Nv~~t~~l~~a~~~~~--~~~~~vvv~snp~~~~~~~~~~~~~~  146 (327)
T 1y7t_A           79 --KDADYALLVGAAPRKA-----GME---RRDLLQVNGKIFTEQGRALAEVA--KKDVKVLVVGNPANTNALIAYKNAPG  146 (327)
T ss_dssp             --TTCSEEEECCCCCCCT-----TCC---HHHHHHHHHHHHHHHHHHHHHHS--CTTCEEEECSSSHHHHHHHHHHTCTT
T ss_pred             --CCCCEEEECCCcCCCC-----CCC---HHHHHHHHHHHHHHHHHHHHhhc--CCCeEEEEeCCchhhhHHHHHHHcCC
Confidence              2689999999975431     122   34678999999999999887652  13457888877541       11  2


Q ss_pred             CCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCC
Q 024145          157 GLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATG  199 (272)
Q Consensus       157 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~  199 (272)
                      .+....|+.+|...+.+.+.++..+   |+.+..++|.++..|
T Consensus       147 ~~p~~~yg~tkl~~er~~~~~a~~~---g~~~~~vr~~~V~G~  186 (327)
T 1y7t_A          147 LNPRNFTAMTRLDHNRAKAQLAKKT---GTGVDRIRRMTVWGN  186 (327)
T ss_dssp             SCGGGEEECCHHHHHHHHHHHHHHH---TCCGGGEECCEEEBC
T ss_pred             CChhheeccchHHHHHHHHHHHHHh---CcChhheeeeEEEcC
Confidence            3445579999999999999998875   455555555544443

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=99.20  E-value=7.6e-11  Score=96.11  Aligned_cols=82  Identities=18%  Similarity=0.184  Sum_probs=63.7

Q ss_pred             CCCCCCcEEEEeCC----------------CChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCH
Q 024145           10 FKRLEGKVAIITGG----------------ASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNE   73 (272)
Q Consensus        10 ~~~l~~k~vlItGa----------------s~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~   73 (272)
                      ..+++||++|||||                |||||.++|++|+++|++|++++++... +     ....+  ..+|+++.
T Consensus         3 ~~~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~l-~-----~~~g~--~~~dv~~~   74 (226)
T 1u7z_A            3 VNDLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL-P-----TPPFV--KRVDVMTA   74 (226)
T ss_dssp             CCTTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCC-C-----CCTTE--EEEECCSH
T ss_pred             ccCCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCccc-c-----cCCCC--eEEccCcH
Confidence            34689999999999                6999999999999999999998876521 1     11122  35688775


Q ss_pred             HHHHHHHHHHHHHhCCccEEEeCCCCCCC
Q 024145           74 DEVINLVDTAVSKFGKLDIMYNNAGILDR  102 (272)
Q Consensus        74 ~~~~~~~~~~~~~~g~id~lv~~ag~~~~  102 (272)
                      ++   +++.+.+.++++|++|||||+...
T Consensus        75 ~~---~~~~v~~~~~~~Dili~~Aav~d~  100 (226)
T 1u7z_A           75 LE---MEAAVNASVQQQNIFIGCAAVADY  100 (226)
T ss_dssp             HH---HHHHHHHHGGGCSEEEECCBCCSE
T ss_pred             HH---HHHHHHHhcCCCCEEEECCcccCC
Confidence            55   566777788899999999998754

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=99.02  E-value=5.6e-10  Score=91.23  Aligned_cols=92  Identities=12%  Similarity=0.241  Sum_probs=64.5

Q ss_pred             CCcEEEEeCC----------------CChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHH
Q 024145           14 EGKVAIITGG----------------ASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVI   77 (272)
Q Consensus        14 ~~k~vlItGa----------------s~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~   77 (272)
                      +||++|||||                ||++|.++|++|+++|++|++++|......    ..+..+..  .|+.   +++
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~----~~~~~~~~--~~v~---s~~   72 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKP----EPHPNLSI--REIT---NTK   72 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCC----CCCTTEEE--EECC---SHH
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccc----cCCCCeEE--EEHh---HHH
Confidence            5899999999                888999999999999999999998654210    01122322  3444   555


Q ss_pred             HHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHH
Q 024145           78 NLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLE  116 (272)
Q Consensus        78 ~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~  116 (272)
                      ++++.+.+.++++|++|+||++...  .+....+.+++.
T Consensus        73 em~~~v~~~~~~~Dili~aAAvsD~--~p~~~~~~e~~~  109 (232)
T 2gk4_A           73 DLLIEMQERVQDYQVLIHSMAVSDY--TPVYMTGLEEVQ  109 (232)
T ss_dssp             HHHHHHHHHGGGCSEEEECSBCCSE--EEEEEEEHHHHH
T ss_pred             HHHHHHHHhcCCCCEEEEcCccccc--cchhhcchhhhh
Confidence            5677777788899999999998654  333333344433

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=99.00  E-value=2.4e-09  Score=78.08  Aligned_cols=74  Identities=19%  Similarity=0.179  Sum_probs=62.6

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcC-CeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENG-AKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDI   92 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   92 (272)
                      .+++++|+|+ |++|+++++.|.++| ++|++++|+++..+.+.   ...+.++.+|+++.+++++++.       ++|+
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~-------~~d~   72 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN---RMGVATKQVDAKDEAGLAKALG-------GFDA   72 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH---TTTCEEEECCTTCHHHHHHHTT-------TCSE
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH---hCCCcEEEecCCCHHHHHHHHc-------CCCE
Confidence            4578999999 999999999999999 89999999887766554   3457789999999988776554       7899


Q ss_pred             EEeCCC
Q 024145           93 MYNNAG   98 (272)
Q Consensus        93 lv~~ag   98 (272)
                      +|++++
T Consensus        73 vi~~~~   78 (118)
T 3ic5_A           73 VISAAP   78 (118)
T ss_dssp             EEECSC
T ss_pred             EEECCC
Confidence            999996

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=98.83  E-value=5.6e-09  Score=80.76  Aligned_cols=75  Identities=23%  Similarity=0.292  Sum_probs=63.2

Q ss_pred             ChHHHHHHHHHHHcCCeEEEeecCcchH------HHHHHHhCCceEEEEecCCCH--HHHHHHHHHHHHHhCCccEEEeC
Q 024145           25 SGIGAMAVELFHENGAKVVIADVQDKLG------EDLADKLGQDVCYIHCDISNE--DEVINLVDTAVSKFGKLDIMYNN   96 (272)
Q Consensus        25 ~giG~aia~~la~~G~~V~~~~r~~~~~------~~~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~g~id~lv~~   96 (272)
                      +.++.++++.|++.|++|++..|+....      .+..++.+.++..+.+|++++  ++++++++.+.+++|+ |+||||
T Consensus        26 ~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~-dVLVnn  104 (157)
T 3gxh_A           26 GLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGK-DVLVHC  104 (157)
T ss_dssp             BCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTS-CEEEEC
T ss_pred             CCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCC-CEEEEC
Confidence            4578999999999999999988865432      334455677888999999999  9999999999998999 999999


Q ss_pred             CCCC
Q 024145           97 AGIL  100 (272)
Q Consensus        97 ag~~  100 (272)
                      +|+.
T Consensus       105 Agg~  108 (157)
T 3gxh_A          105 LANY  108 (157)
T ss_dssp             SBSH
T ss_pred             CCCC
Confidence            9964

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.78  E-value=2.3e-08  Score=89.12  Aligned_cols=78  Identities=17%  Similarity=0.274  Sum_probs=68.1

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcC---CeEEEeecCcchHHHHHHHhC----CceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145           16 KVAIITGGASGIGAMAVELFHENG---AKVVIADVQDKLGEDLADKLG----QDVCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G---~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      ++++|+|| |+||+++++.|+++|   .+|++++|+.++.+++.++++    .++..+.+|+++.+++++++++.     
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~-----   75 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEV-----   75 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHH-----
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhh-----
Confidence            47899999 899999999999998   389999999998888877764    36889999999999999988865     


Q ss_pred             CccEEEeCCCC
Q 024145           89 KLDIMYNNAGI   99 (272)
Q Consensus        89 ~id~lv~~ag~   99 (272)
                      ++|+|||+++.
T Consensus        76 ~~DvVin~ag~   86 (405)
T 4ina_A           76 KPQIVLNIALP   86 (405)
T ss_dssp             CCSEEEECSCG
T ss_pred             CCCEEEECCCc
Confidence            68999999974

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.71  E-value=3.2e-08  Score=89.31  Aligned_cols=78  Identities=15%  Similarity=0.200  Sum_probs=63.7

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      ++|+++|+| +|++|++++++|++.|++|++++|+.+..+++.+.++ .+..+.+|+++.++++++++       ++|+|
T Consensus         2 ~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~-~~~~~~~Dv~d~~~l~~~l~-------~~DvV   72 (450)
T 1ff9_A            2 ATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQ-HSTPISLDVNDDAALDAEVA-------KHDLV   72 (450)
T ss_dssp             CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCT-TEEEEECCTTCHHHHHHHHT-------TSSEE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcC-CceEEEeecCCHHHHHHHHc-------CCcEE
Confidence            578999998 7999999999999999999999998876665544433 46788999999988876654       69999


Q ss_pred             EeCCCCC
Q 024145           94 YNNAGIL  100 (272)
Q Consensus        94 v~~ag~~  100 (272)
                      ||+++..
T Consensus        73 In~a~~~   79 (450)
T 1ff9_A           73 ISLIPYT   79 (450)
T ss_dssp             EECCC--
T ss_pred             EECCccc
Confidence            9999863

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.69  E-value=5.6e-08  Score=85.57  Aligned_cols=108  Identities=20%  Similarity=0.226  Sum_probs=77.3

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      ..+++++++|+|+ |+||+++++.+...|++|++++|++++.+.+.+..+..   +.+|.++.+++++++.       ..
T Consensus       162 ~~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~---~~~~~~~~~~l~~~~~-------~~  230 (369)
T 2eez_A          162 PGVAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGR---VITLTATEANIKKSVQ-------HA  230 (369)
T ss_dssp             TBBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTS---EEEEECCHHHHHHHHH-------HC
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCce---EEEecCCHHHHHHHHh-------CC
Confidence            3578899999999 99999999999999999999999988776665555544   4567778887766554       58


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccc
Q 024145           91 DIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASAC  152 (272)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~  152 (272)
                      |++|++++....   .                  .+..+.+..++.|+  +.++||++++..
T Consensus       231 DvVi~~~g~~~~---~------------------~~~li~~~~l~~mk--~gg~iV~v~~~~  269 (369)
T 2eez_A          231 DLLIGAVLVPGA---K------------------APKLVTRDMLSLMK--EGAVIVDVAVDQ  269 (369)
T ss_dssp             SEEEECCC----------------------------CCSCHHHHTTSC--TTCEEEECC---
T ss_pred             CEEEECCCCCcc---c------------------cchhHHHHHHHhhc--CCCEEEEEecCC
Confidence            999999986421   0                  01223455667774  568899988653

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=98.68  E-value=1.4e-11  Score=110.74  Aligned_cols=45  Identities=20%  Similarity=0.420  Sum_probs=39.0

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHH
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLA   56 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~   56 (272)
                      .++.||+++|||++ +||+++++.|++.|++|+++++++...++..
T Consensus       261 ~~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa  305 (488)
T 3ond_A          261 VMIAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICALQAT  305 (488)
T ss_dssp             CCCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CcccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence            35899999999987 9999999999999999999999876655443

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.68  E-value=3.6e-08  Score=85.45  Aligned_cols=79  Identities=20%  Similarity=0.330  Sum_probs=61.4

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      .|+++|||||+||||.++++.+...|++|+++++++++.+.+ ++++..   ..+|.++.+++.+.+.++..  +++|++
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~g~~---~~~d~~~~~~~~~~~~~~~~--~~~d~v  218 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQIGFD---AAFNYKTVNSLEEALKKASP--DGYDCY  218 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTTCS---EEEETTSCSCHHHHHHHHCT--TCEEEE
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HhcCCc---EEEecCCHHHHHHHHHHHhC--CCCeEE
Confidence            679999999999999999999999999999999988777665 666543   23577764445444444332  579999


Q ss_pred             EeCCC
Q 024145           94 YNNAG   98 (272)
Q Consensus        94 v~~ag   98 (272)
                      |+|+|
T Consensus       219 i~~~g  223 (333)
T 1v3u_A          219 FDNVG  223 (333)
T ss_dssp             EESSC
T ss_pred             EECCC
Confidence            99998

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.66  E-value=4.2e-08  Score=78.47  Aligned_cols=103  Identities=17%  Similarity=0.226  Sum_probs=71.4

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      .|+++|||||+||||.++++.+...|++|++++|+++..+.. ++.+..   ..+|..+.+..+.+.+...  .+++|++
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~g~~---~~~d~~~~~~~~~~~~~~~--~~~~D~v  111 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREML-SRLGVE---YVGDSRSVDFADEILELTD--GYGVDVV  111 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH-HTTCCS---EEEETTCSTHHHHHHHHTT--TCCEEEE
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCC---EEeeCCcHHHHHHHHHHhC--CCCCeEE
Confidence            679999999999999999999999999999999987765544 344433   2247766554443333221  1369999


Q ss_pred             EeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccc
Q 024145           94 YNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASAC  152 (272)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~  152 (272)
                      |+|+|.             +.               .+.+++.+.  +.|+++.+++..
T Consensus       112 i~~~g~-------------~~---------------~~~~~~~l~--~~G~~v~~g~~~  140 (198)
T 1pqw_A          112 LNSLAG-------------EA---------------IQRGVQILA--PGGRFIELGKKD  140 (198)
T ss_dssp             EECCCT-------------HH---------------HHHHHHTEE--EEEEEEECSCGG
T ss_pred             EECCch-------------HH---------------HHHHHHHhc--cCCEEEEEcCCC
Confidence            999972             11               234555553  468999987754

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=98.61  E-value=4.6e-09  Score=96.62  Aligned_cols=101  Identities=19%  Similarity=0.200  Sum_probs=65.8

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   91 (272)
                      ++++|+++|||| ||+|++++.+|++.|++|++++|+.++.+++.++++..+.    ++.+   ++++      ..+.+|
T Consensus       361 ~l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~~~~~~----~~~d---l~~~------~~~~~D  426 (523)
T 2o7s_A          361 PLASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAIGGKAL----SLTD---LDNY------HPEDGM  426 (523)
T ss_dssp             -----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHTTC-CE----ETTT---TTTC--------CCSE
T ss_pred             ccCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCcee----eHHH---hhhc------cccCce
Confidence            578899999999 5999999999999999999999999888888877754332    2222   1100      113589


Q ss_pred             EEEeCCCCCCCC---CCCCCCCCHHHHHHHHHHHhHHH
Q 024145           92 IMYNNAGILDRS---FGSILDTPKSDLERLINVNTIGG  126 (272)
Q Consensus        92 ~lv~~ag~~~~~---~~~~~~~~~~~~~~~~~~n~~~~  126 (272)
                      ++|||+|....+   ..++.+.+.+++..++++|+.+.
T Consensus       427 ilVN~agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~p~  464 (523)
T 2o7s_A          427 VLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPR  464 (523)
T ss_dssp             EEEECSSTTCTTCTTCCSSCTTTGGGEEEEEECCCSSS
T ss_pred             EEEECCCCCCCCCCCCCCCChHHcCcCcEEEEEeeCCc
Confidence            999999974321   12344555566666777776653

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.60  E-value=1.4e-07  Score=85.31  Aligned_cols=80  Identities=15%  Similarity=0.178  Sum_probs=64.5

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHc-CCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHEN-GAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGK   89 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (272)
                      .++++|+++|+|+ |++|+++++.|++. |++|++++|+.++.+++.+.  ..+.++.+|+.+.+++.++++       +
T Consensus        19 ~~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~--~~~~~~~~D~~d~~~l~~~l~-------~   88 (467)
T 2axq_A           19 GRHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP--SGSKAISLDVTDDSALDKVLA-------D   88 (467)
T ss_dssp             ----CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG--GTCEEEECCTTCHHHHHHHHH-------T
T ss_pred             cCCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh--cCCcEEEEecCCHHHHHHHHc-------C
Confidence            4578899999997 99999999999998 78999999998887777655  246677899999988776664       6


Q ss_pred             ccEEEeCCCCC
Q 024145           90 LDIMYNNAGIL  100 (272)
Q Consensus        90 id~lv~~ag~~  100 (272)
                      +|+|||+++..
T Consensus        89 ~DvVIn~tp~~   99 (467)
T 2axq_A           89 NDVVISLIPYT   99 (467)
T ss_dssp             SSEEEECSCGG
T ss_pred             CCEEEECCchh
Confidence            89999999853

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.50  E-value=3.1e-07  Score=80.00  Aligned_cols=104  Identities=20%  Similarity=0.302  Sum_probs=74.9

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      .|+++||+|++|+||+++++.+...|++|++++|++++.+ ..++++..   ..+|.++.+++.+.+.++...  ++|++
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~-~~~~~g~~---~~~d~~~~~~~~~~~~~~~~~--~~D~v  242 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEE-LFRSIGGE---VFIDFTKEKDIVGAVLKATDG--GAHGV  242 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHH-HHHHTTCC---EEEETTTCSCHHHHHHHHHTS--CEEEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHH-HHHHcCCc---eEEecCccHhHHHHHHHHhCC--CCCEE
Confidence            6799999999999999999999999999999999887764 34456543   234777555555555544332  69999


Q ss_pred             EeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccc
Q 024145           94 YNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASAC  152 (272)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~  152 (272)
                      |+++|..            +               .++.+++.+.  +.|+++.+++..
T Consensus       243 i~~~g~~------------~---------------~~~~~~~~l~--~~G~iv~~g~~~  272 (347)
T 2hcy_A          243 INVSVSE------------A---------------AIEASTRYVR--ANGTTVLVGMPA  272 (347)
T ss_dssp             EECSSCH------------H---------------HHHHHTTSEE--EEEEEEECCCCT
T ss_pred             EECCCcH------------H---------------HHHHHHHHHh--cCCEEEEEeCCC
Confidence            9999831            1               2344555553  468999887643

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=98.49  E-value=2.7e-08  Score=84.61  Aligned_cols=78  Identities=19%  Similarity=0.228  Sum_probs=58.4

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCc---eEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQD---VCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      ++++|+++|||++ |+|++++++|++.| +|++++|+.++.+++.++++..   ...+.+|+.+.          .+.++
T Consensus       125 ~l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~----------~~~~~  192 (287)
T 1nvt_A          125 RVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGL----------DVDLD  192 (287)
T ss_dssp             CCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECT----------TCCCT
T ss_pred             CcCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEeeH----------HHhhC
Confidence            5789999999997 99999999999999 9999999988777776655321   00122344431          23456


Q ss_pred             CccEEEeCCCCCC
Q 024145           89 KLDIMYNNAGILD  101 (272)
Q Consensus        89 ~id~lv~~ag~~~  101 (272)
                      ++|+||||+|...
T Consensus       193 ~~DilVn~ag~~~  205 (287)
T 1nvt_A          193 GVDIIINATPIGM  205 (287)
T ss_dssp             TCCEEEECSCTTC
T ss_pred             CCCEEEECCCCCC
Confidence            8999999999754

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.47  E-value=5.7e-07  Score=67.76  Aligned_cols=75  Identities=19%  Similarity=0.170  Sum_probs=60.4

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      ..++++|+|+ |.+|+++++.|.++|++|++++++++..+.+.+   ..+.++..|.++++.++++      ...+.|.+
T Consensus         5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~---~~~~~~~gd~~~~~~l~~~------~~~~~d~v   74 (141)
T 3llv_A            5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLED---EGFDAVIADPTDESFYRSL------DLEGVSAV   74 (141)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH---TTCEEEECCTTCHHHHHHS------CCTTCSEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH---CCCcEEECCCCCHHHHHhC------CcccCCEE
Confidence            4568999998 789999999999999999999999887766554   2467889999999887653      12368999


Q ss_pred             EeCCC
Q 024145           94 YNNAG   98 (272)
Q Consensus        94 v~~ag   98 (272)
                      |.+.+
T Consensus        75 i~~~~   79 (141)
T 3llv_A           75 LITGS   79 (141)
T ss_dssp             EECCS
T ss_pred             EEecC
Confidence            98775

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=98.46  E-value=2.3e-07  Score=80.72  Aligned_cols=80  Identities=20%  Similarity=0.333  Sum_probs=60.2

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      .|+++||+||+|+||.++++.+...|++|+++++++++.+.+.++++...   .+|..+.+++.+.+.++..  +++|++
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~~~---~~d~~~~~~~~~~~~~~~~--~~~d~v  229 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDD---AFNYKEESDLTAALKRCFP--NGIDIY  229 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCCSE---EEETTSCSCSHHHHHHHCT--TCEEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCce---EEecCCHHHHHHHHHHHhC--CCCcEE
Confidence            67999999999999999999999999999999998877766654566432   2366554344444443322  479999


Q ss_pred             EeCCC
Q 024145           94 YNNAG   98 (272)
Q Consensus        94 v~~ag   98 (272)
                      |+++|
T Consensus       230 i~~~g  234 (345)
T 2j3h_A          230 FENVG  234 (345)
T ss_dssp             EESSC
T ss_pred             EECCC
Confidence            99997

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.46  E-value=1.2e-06  Score=75.08  Aligned_cols=82  Identities=18%  Similarity=0.229  Sum_probs=62.4

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecC---cchHHHHHHHhCC--ceEEEEecCCCHHHHHHHHHHHH
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQ---DKLGEDLADKLGQ--DVCYIHCDISNEDEVINLVDTAV   84 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~---~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~   84 (272)
                      .+++||++||+|+ ||+|++++..|++.|+ +|++++|+   .++.+++.++++.  .+.+...++.+.+++.+.+.   
T Consensus       150 ~~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~---  225 (315)
T 3tnl_A          150 HDIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIA---  225 (315)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH---
T ss_pred             CCccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhc---
Confidence            4578999999997 7999999999999998 89999999   7777777666532  23344456667666554443   


Q ss_pred             HHhCCccEEEeCCCCC
Q 024145           85 SKFGKLDIMYNNAGIL  100 (272)
Q Consensus        85 ~~~g~id~lv~~ag~~  100 (272)
                          ..|+|||+....
T Consensus       226 ----~aDiIINaTp~G  237 (315)
T 3tnl_A          226 ----ESVIFTNATGVG  237 (315)
T ss_dssp             ----TCSEEEECSSTT
T ss_pred             ----CCCEEEECccCC
Confidence                689999988643

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.46  E-value=1.5e-07  Score=70.86  Aligned_cols=77  Identities=18%  Similarity=0.323  Sum_probs=57.0

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   91 (272)
                      ++++++++|+|+ |++|+.+++.|.+.|++|++++++++..+.+.+   ....++..|.++.+.++++      ...+.|
T Consensus         3 ~~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~---~~~~~~~~d~~~~~~l~~~------~~~~~d   72 (144)
T 2hmt_A            3 RIKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYAS---YATHAVIANATEENELLSL------GIRNFE   72 (144)
T ss_dssp             ---CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTT---TCSEEEECCTTCHHHHHTT------TGGGCS
T ss_pred             CCcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---hCCEEEEeCCCCHHHHHhc------CCCCCC
Confidence            456788999998 999999999999999999999998765443221   2345678899987665432      123689


Q ss_pred             EEEeCCC
Q 024145           92 IMYNNAG   98 (272)
Q Consensus        92 ~lv~~ag   98 (272)
                      ++|++++
T Consensus        73 ~vi~~~~   79 (144)
T 2hmt_A           73 YVIVAIG   79 (144)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999986

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=98.45  E-value=4.4e-07  Score=78.52  Aligned_cols=150  Identities=10%  Similarity=0.048  Sum_probs=96.1

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCC-------eEEEeecC----cchHHHHHHHhCCc-eEEEEecCCCHHHHHHHHHH
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGA-------KVVIADVQ----DKLGEDLADKLGQD-VCYIHCDISNEDEVINLVDT   82 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~-------~V~~~~r~----~~~~~~~~~~~~~~-~~~~~~D~~~~~~~~~~~~~   82 (272)
                      ..+++||||+|++|.+++..|+..|.       +|++.+++    +++.+.....+... ..+ ..|+...++.++.   
T Consensus         5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~-~~~i~~~~~~~~a---   80 (329)
T 1b8p_A            5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPL-LAGMTAHADPMTA---   80 (329)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTT-EEEEEEESSHHHH---
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccc-cCcEEEecCcHHH---
Confidence            35899999999999999999999885       79999887    44343322222111 111 1244332333322   


Q ss_pred             HHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccc--------c
Q 024145           83 AVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACT--------E  154 (272)
Q Consensus        83 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~--------~  154 (272)
                          +.+.|++||.||....     ...+.   .+.+..|+.....+++.+..+-  ...+++|++|....        .
T Consensus        81 ----l~~aD~Vi~~ag~~~~-----~g~~r---~dl~~~N~~i~~~i~~~i~~~~--~p~a~ii~~SNPv~~~t~~~~~~  146 (329)
T 1b8p_A           81 ----FKDADVALLVGARPRG-----PGMER---KDLLEANAQIFTVQGKAIDAVA--SRNIKVLVVGNPANTNAYIAMKS  146 (329)
T ss_dssp             ----TTTCSEEEECCCCCCC-----TTCCH---HHHHHHHHHHHHHHHHHHHHHS--CTTCEEEECSSSHHHHHHHHHHT
T ss_pred             ----hCCCCEEEEeCCCCCC-----CCCCH---HHHHHHHHHHHHHHHHHHHHhc--CCCeEEEEccCchHHHHHHHHHH
Confidence                2378999999996532     12232   3467889998888888877642  14578999987542        1


Q ss_pred             c-cCCCCchhhhhHHHHHHHHHHHHHHhc
Q 024145          155 I-AGLGSPAYTISKYGILGLVKCLAAELG  182 (272)
Q Consensus       155 ~-~~~~~~~Y~~sK~a~~~~~~~la~e~~  182 (272)
                      . +.|....|+.++.--..+...++..+.
T Consensus       147 ~~~~p~~~v~g~t~Ld~~r~~~~la~~lg  175 (329)
T 1b8p_A          147 APSLPAKNFTAMLRLDHNRALSQIAAKTG  175 (329)
T ss_dssp             CTTSCGGGEEECCHHHHHHHHHHHHHHHT
T ss_pred             cCCCCHHHEEEeecHHHHHHHHHHHHHhC
Confidence            1 334444688887666677777777764

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.43  E-value=4.3e-07  Score=76.45  Aligned_cols=77  Identities=16%  Similarity=0.145  Sum_probs=58.1

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   91 (272)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.++++........|+   +++       .+  +..|
T Consensus       116 ~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~~~~~---~~~-------~~--~~~D  182 (271)
T 1nyt_A          116 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSM---DEL-------EG--HEFD  182 (271)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCS---GGG-------TT--CCCS
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCeeEecH---HHh-------cc--CCCC
Confidence            578999999998 7999999999999999999999998888888776643111112332   221       11  5899


Q ss_pred             EEEeCCCCCC
Q 024145           92 IMYNNAGILD  101 (272)
Q Consensus        92 ~lv~~ag~~~  101 (272)
                      +||++++...
T Consensus       183 ivVn~t~~~~  192 (271)
T 1nyt_A          183 LIINATSSGI  192 (271)
T ss_dssp             EEEECCSCGG
T ss_pred             EEEECCCCCC
Confidence            9999999653

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.41  E-value=4.2e-07  Score=78.42  Aligned_cols=79  Identities=20%  Similarity=0.241  Sum_probs=58.4

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      .|+++|||||+|+||.++++.+...|++|++++|++++.+.+. +++...   .+|..+.+..+.+.+...  ..++|++
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~-~~g~~~---~~~~~~~~~~~~~~~~~~--~~~~D~v  213 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL-KAGAWQ---VINYREEDLVERLKEITG--GKKVRVV  213 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HHTCSE---EEETTTSCHHHHHHHHTT--TCCEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCE---EEECCCccHHHHHHHHhC--CCCceEE
Confidence            5799999999999999999999999999999999877665544 455432   246666544444333221  1369999


Q ss_pred             EeCCC
Q 024145           94 YNNAG   98 (272)
Q Consensus        94 v~~ag   98 (272)
                      |+|+|
T Consensus       214 i~~~g  218 (327)
T 1qor_A          214 YDSVG  218 (327)
T ss_dssp             EECSC
T ss_pred             EECCc
Confidence            99998

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=98.41  E-value=2.3e-06  Score=77.12  Aligned_cols=84  Identities=23%  Similarity=0.410  Sum_probs=62.6

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEe--cCC---------CHHHHHHHHHH
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHC--DIS---------NEDEVINLVDT   82 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~--D~~---------~~~~~~~~~~~   82 (272)
                      .|+++||+||+|+||.+.++.+...|++|+++++++++.+.+ ++++....+...  |+.         +.++++.+.++
T Consensus       220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~-~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (447)
T 4a0s_A          220 QGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAV-RALGCDLVINRAELGITDDIADDPRRVVETGRKLAKL  298 (447)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HhcCCCEEEecccccccccccccccccchhhhHHHHH
Confidence            679999999999999999999999999999999887766544 566654333222  221         23555666777


Q ss_pred             HHHHhC-CccEEEeCCC
Q 024145           83 AVSKFG-KLDIMYNNAG   98 (272)
Q Consensus        83 ~~~~~g-~id~lv~~ag   98 (272)
                      +.+..+ ++|++|+++|
T Consensus       299 v~~~~g~g~Dvvid~~G  315 (447)
T 4a0s_A          299 VVEKAGREPDIVFEHTG  315 (447)
T ss_dssp             HHHHHSSCCSEEEECSC
T ss_pred             HHHHhCCCceEEEECCC
Confidence            777554 6999999998

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.41  E-value=5.9e-07  Score=77.75  Aligned_cols=80  Identities=23%  Similarity=0.296  Sum_probs=58.8

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      .|+++|||||+|+||.++++.+...|++|++++|++++.+.+ ++++...   .+|.++.+..+.+.+...  ..++|++
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~-~~~g~~~---~~d~~~~~~~~~i~~~~~--~~~~d~v  218 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETA-RKLGCHH---TINYSTQDFAEVVREITG--GKGVDVV  218 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHHTCSE---EEETTTSCHHHHHHHHHT--TCCEEEE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCCCE---EEECCCHHHHHHHHHHhC--CCCCeEE
Confidence            678999999999999999999999999999999988766554 3455432   246665444433333221  1369999


Q ss_pred             EeCCCC
Q 024145           94 YNNAGI   99 (272)
Q Consensus        94 v~~ag~   99 (272)
                      |+|+|.
T Consensus       219 i~~~g~  224 (333)
T 1wly_A          219 YDSIGK  224 (333)
T ss_dssp             EECSCT
T ss_pred             EECCcH
Confidence            999983

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=98.38  E-value=6.7e-07  Score=77.44  Aligned_cols=79  Identities=27%  Similarity=0.400  Sum_probs=59.5

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      .|+++||+|++|+||.++++.+...|++|+++++++++.+.+.++++...   .+|..+.+..+.+.+..   .+++|++
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~---~~~~d~v  222 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDG---AIDYKNEDLAAGLKREC---PKGIDVF  222 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCSE---EEETTTSCHHHHHHHHC---TTCEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCE---EEECCCHHHHHHHHHhc---CCCceEE
Confidence            68999999999999999999999999999999999888776656676532   24555543333322221   2469999


Q ss_pred             EeCCC
Q 024145           94 YNNAG   98 (272)
Q Consensus        94 v~~ag   98 (272)
                      |+|+|
T Consensus       223 i~~~g  227 (336)
T 4b7c_A          223 FDNVG  227 (336)
T ss_dssp             EESSC
T ss_pred             EECCC
Confidence            99998

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.38  E-value=5.8e-07  Score=78.56  Aligned_cols=79  Identities=22%  Similarity=0.330  Sum_probs=58.3

Q ss_pred             CC--cEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           14 EG--KVAIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        14 ~~--k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      .|  +++|||||+||||.++++.+...|+ +|+++++++++.+.+.++++..   ..+|..+.+..+. +.+...  +++
T Consensus       158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~---~~~d~~~~~~~~~-~~~~~~--~~~  231 (357)
T 2zb4_A          158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFD---AAINYKKDNVAEQ-LRESCP--AGV  231 (357)
T ss_dssp             TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCS---EEEETTTSCHHHH-HHHHCT--TCE
T ss_pred             CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc---eEEecCchHHHHH-HHHhcC--CCC
Confidence            56  8999999999999999999999999 9999999887776665556643   2356665332222 222211  269


Q ss_pred             cEEEeCCC
Q 024145           91 DIMYNNAG   98 (272)
Q Consensus        91 d~lv~~ag   98 (272)
                      |++|+|+|
T Consensus       232 d~vi~~~G  239 (357)
T 2zb4_A          232 DVYFDNVG  239 (357)
T ss_dssp             EEEEESCC
T ss_pred             CEEEECCC
Confidence            99999998

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=98.38  E-value=7.2e-07  Score=77.93  Aligned_cols=80  Identities=21%  Similarity=0.273  Sum_probs=58.8

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      .|+++||+||+|+||.++++.+...|++|++++|++++.+.+ ++++..   ..+|..+.+..+.+.+...  .+++|++
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~g~~---~~~~~~~~~~~~~~~~~~~--~~~~d~v  235 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA-EKLGAA---AGFNYKKEDFSEATLKFTK--GAGVNLI  235 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHHTCS---EEEETTTSCHHHHHHHHTT--TSCEEEE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCc---EEEecCChHHHHHHHHHhc--CCCceEE
Confidence            578999999999999999999999999999999988776655 556643   2346665443333322111  1369999


Q ss_pred             EeCCCC
Q 024145           94 YNNAGI   99 (272)
Q Consensus        94 v~~ag~   99 (272)
                      |+|+|.
T Consensus       236 i~~~G~  241 (354)
T 2j8z_A          236 LDCIGG  241 (354)
T ss_dssp             EESSCG
T ss_pred             EECCCc
Confidence            999983

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=98.37  E-value=9.2e-07  Score=77.20  Aligned_cols=77  Identities=13%  Similarity=0.205  Sum_probs=58.1

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHh--CCcc
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKF--GKLD   91 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g~id   91 (272)
                      .|+++||+||+|+||.++++.+...|++|++++|++++.+ ..++++..   ..+|..+.+..++    +.+..  .++|
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~~~~ga~---~~~d~~~~~~~~~----~~~~~~~~~~D  241 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQK-IVLQNGAH---EVFNHREVNYIDK----IKKYVGEKGID  241 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHHHTTCS---EEEETTSTTHHHH----HHHHHCTTCEE
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHH-HHHHcCCC---EEEeCCCchHHHH----HHHHcCCCCcE
Confidence            5789999999999999999999999999999999887766 44556543   2346666443333    33322  2699


Q ss_pred             EEEeCCC
Q 024145           92 IMYNNAG   98 (272)
Q Consensus        92 ~lv~~ag   98 (272)
                      ++|+|+|
T Consensus       242 ~vi~~~G  248 (351)
T 1yb5_A          242 IIIEMLA  248 (351)
T ss_dssp             EEEESCH
T ss_pred             EEEECCC
Confidence            9999997

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.28  E-value=4.8e-06  Score=63.58  Aligned_cols=78  Identities=13%  Similarity=0.153  Sum_probs=60.7

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCc-chHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQD-KLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDI   92 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   92 (272)
                      .++.++|.|+ |.+|+.+++.|.+.|++|+++++++ +..+.+.+.....+.++..|.++++.++++      ...+.|.
T Consensus         2 ~~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a------~i~~ad~   74 (153)
T 1id1_A            2 RKDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKA------GIDRCRA   74 (153)
T ss_dssp             CCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHH------TTTTCSE
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHc------ChhhCCE
Confidence            3567888886 9999999999999999999999974 545555555555688999999998876543      1236899


Q ss_pred             EEeCCC
Q 024145           93 MYNNAG   98 (272)
Q Consensus        93 lv~~ag   98 (272)
                      +|.+.+
T Consensus        75 vi~~~~   80 (153)
T 1id1_A           75 ILALSD   80 (153)
T ss_dssp             EEECSS
T ss_pred             EEEecC
Confidence            988875

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=98.22  E-value=6.3e-07  Score=75.81  Aligned_cols=79  Identities=16%  Similarity=0.263  Sum_probs=58.6

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHHHHHHHhCC---ceEEEEecCCCHHHHHHHHHHHHHH
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGEDLADKLGQ---DVCYIHCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~~   86 (272)
                      .++++|+++|+|+ ||+|++++.+|++.|+ +|++++|+.++.+++.++++.   .+.+...+..+.+   +.+.     
T Consensus       123 ~~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~---~~l~-----  193 (283)
T 3jyo_A          123 PNAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIE---DVIA-----  193 (283)
T ss_dssp             TTCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTHH---HHHH-----
T ss_pred             cCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHHH---HHHh-----
Confidence            3578999999998 8999999999999998 699999999988877766532   2333344443332   2222     


Q ss_pred             hCCccEEEeCCCCC
Q 024145           87 FGKLDIMYNNAGIL  100 (272)
Q Consensus        87 ~g~id~lv~~ag~~  100 (272)
                        ..|+|||+....
T Consensus       194 --~~DiVInaTp~G  205 (283)
T 3jyo_A          194 --AADGVVNATPMG  205 (283)
T ss_dssp             --HSSEEEECSSTT
T ss_pred             --cCCEEEECCCCC
Confidence              479999988643

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=98.18  E-value=3.9e-06  Score=73.00  Aligned_cols=78  Identities=22%  Similarity=0.328  Sum_probs=57.4

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHc-CCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHh--CCc
Q 024145           14 EGKVAIITGGASGIGAMAVELFHEN-GAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKF--GKL   90 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g~i   90 (272)
                      .|+++||+|++++||.++++.+... |++|+++++++++.+.+ ++++...   .+|..+.+..+.    +.+..  +++
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~-~~~g~~~---~~~~~~~~~~~~----~~~~~~~~~~  241 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAA-KRAGADY---VINASMQDPLAE----IRRITESKGV  241 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHH-HHHTCSE---EEETTTSCHHHH----HHHHTTTSCE
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHhCCCE---EecCCCccHHHH----HHHHhcCCCc
Confidence            6789999999999999999999999 99999999988776554 4566432   235555333222    22222  479


Q ss_pred             cEEEeCCCC
Q 024145           91 DIMYNNAGI   99 (272)
Q Consensus        91 d~lv~~ag~   99 (272)
                      |++|+++|.
T Consensus       242 d~vi~~~g~  250 (347)
T 1jvb_A          242 DAVIDLNNS  250 (347)
T ss_dssp             EEEEESCCC
T ss_pred             eEEEECCCC
Confidence            999999983

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=98.18  E-value=6.9e-06  Score=70.26  Aligned_cols=82  Identities=13%  Similarity=0.231  Sum_probs=59.2

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecC---cchHHHHHHHhCC--ceEEEEecCCCHHHHHHHHHHHH
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQ---DKLGEDLADKLGQ--DVCYIHCDISNEDEVINLVDTAV   84 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~---~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~   84 (272)
                      .++++|++||+|+ ||.|++++.+|++.|+ +|+++.|+   .++.+++.++++.  .......+..+.+...+.+.   
T Consensus       144 ~~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~---  219 (312)
T 3t4e_A          144 FDMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALA---  219 (312)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH---
T ss_pred             CCcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhcc---
Confidence            4578999999997 8999999999999998 79999999   6677777665532  12333445555433322222   


Q ss_pred             HHhCCccEEEeCCCCC
Q 024145           85 SKFGKLDIMYNNAGIL  100 (272)
Q Consensus        85 ~~~g~id~lv~~ag~~  100 (272)
                          ..|+|||+....
T Consensus       220 ----~~DiIINaTp~G  231 (312)
T 3t4e_A          220 ----SADILTNGTKVG  231 (312)
T ss_dssp             ----HCSEEEECSSTT
T ss_pred             ----CceEEEECCcCC
Confidence                479999987654

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=98.17  E-value=4.6e-06  Score=73.09  Aligned_cols=76  Identities=20%  Similarity=0.383  Sum_probs=55.3

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCc---chHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQD---KLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      +++|+++||+|+ |++|..+++.+...|++|+++++++   ++.+ ..++++..  .+  | .+  ++.+.+.+ . . +
T Consensus       178 ~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~-~~~~~ga~--~v--~-~~--~~~~~~~~-~-~-~  245 (366)
T 2cdc_A          178 TLNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQT-VIEETKTN--YY--N-SS--NGYDKLKD-S-V-G  245 (366)
T ss_dssp             SSTTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHH-HHHHHTCE--EE--E-CT--TCSHHHHH-H-H-C
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHH-HHHHhCCc--ee--c-hH--HHHHHHHH-h-C-C
Confidence            456999999999 9999999999999999999999987   6553 44566642  23  5 44  22222222 1 2 5


Q ss_pred             CccEEEeCCCC
Q 024145           89 KLDIMYNNAGI   99 (272)
Q Consensus        89 ~id~lv~~ag~   99 (272)
                      ++|++|+++|.
T Consensus       246 ~~d~vid~~g~  256 (366)
T 2cdc_A          246 KFDVIIDATGA  256 (366)
T ss_dssp             CEEEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999984

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=98.15  E-value=4.9e-05  Score=65.50  Aligned_cols=116  Identities=16%  Similarity=0.189  Sum_probs=72.9

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcC--CeEEEeecCcchHHHHHHHh--CCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Q 024145           16 KVAIITGGASGIGAMAVELFHENG--AKVVIADVQDKLGEDLADKL--GQDVCYIHCDISNEDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G--~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   91 (272)
                      .+++||||+|++|..++..|+++|  .+|++++++++ .....+..  ..... +.. +.+.++.++++.       +.|
T Consensus         9 mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~-~~~~~dL~~~~~~~~-v~~-~~~t~d~~~al~-------gaD   78 (326)
T 1smk_A            9 FKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA-PGVTADISHMDTGAV-VRG-FLGQQQLEAALT-------GMD   78 (326)
T ss_dssp             EEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH-HHHHHHHHTSCSSCE-EEE-EESHHHHHHHHT-------TCS
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc-HhHHHHhhcccccce-EEE-EeCCCCHHHHcC-------CCC
Confidence            589999999999999999999998  78999987765 21221111  11111 111 223444443333       789


Q ss_pred             EEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccc
Q 024145           92 IMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASAC  152 (272)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~  152 (272)
                      ++|+.+|....+ +    .+..   +.+..|+.....+++.+..+-   ..+.|+++|-..
T Consensus        79 vVi~~ag~~~~~-g----~~r~---dl~~~N~~~~~~i~~~i~~~~---p~~~viv~SNPv  128 (326)
T 1smk_A           79 LIIVPAGVPRKP-G----MTRD---DLFKINAGIVKTLCEGIAKCC---PRAIVNLISNPV  128 (326)
T ss_dssp             EEEECCCCCCCS-S----CCCS---HHHHHHHHHHHHHHHHHHHHC---TTSEEEECCSSH
T ss_pred             EEEEcCCcCCCC-C----CCHH---HHHHHHHHHHHHHHHHHHhhC---CCeEEEEECCch
Confidence            999999965431 1    1111   347889999888888877643   345555544333

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=98.14  E-value=1e-05  Score=67.93  Aligned_cols=75  Identities=13%  Similarity=0.168  Sum_probs=56.7

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCC--ceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQ--DVCYIHCDISNEDEVINLVDTAVSKFGK   89 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (272)
                      ++++|+++|+|+ ||+|++++.+|++.|++|++++|+.++.+++.+.++.  .+..  .|+   +++.       +  +.
T Consensus       116 ~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~~~~~--~~~---~~~~-------~--~~  180 (272)
T 1p77_A          116 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQA--VSM---DSIP-------L--QT  180 (272)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEE--EEG---GGCC-------C--SC
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccCCeEE--eeH---HHhc-------c--CC
Confidence            568999999998 8999999999999999999999999888888776643  2322  232   1110       1  47


Q ss_pred             ccEEEeCCCCCC
Q 024145           90 LDIMYNNAGILD  101 (272)
Q Consensus        90 id~lv~~ag~~~  101 (272)
                      .|+||++++...
T Consensus       181 ~DivIn~t~~~~  192 (272)
T 1p77_A          181 YDLVINATSAGL  192 (272)
T ss_dssp             CSEEEECCCC--
T ss_pred             CCEEEECCCCCC
Confidence            999999998643

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=98.13  E-value=8.5e-06  Score=71.05  Aligned_cols=79  Identities=28%  Similarity=0.377  Sum_probs=58.1

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      .|+++||+||+|+||.++++.+...|++|+++++++++.+.+ ++++....   +|..+.+..+.+.+..   .+++|++
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~lGa~~~---~~~~~~~~~~~~~~~~---~~g~Dvv  239 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEAC-ERLGAKRG---INYRSEDFAAVIKAET---GQGVDII  239 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHHTCSEE---EETTTSCHHHHHHHHH---SSCEEEE
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HhcCCCEE---EeCCchHHHHHHHHHh---CCCceEE
Confidence            678999999999999999999999999999999988876644 45665422   3554443333332222   3479999


Q ss_pred             EeCCCC
Q 024145           94 YNNAGI   99 (272)
Q Consensus        94 v~~ag~   99 (272)
                      |+++|.
T Consensus       240 id~~g~  245 (353)
T 4dup_A          240 LDMIGA  245 (353)
T ss_dssp             EESCCG
T ss_pred             EECCCH
Confidence            999983

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=98.12  E-value=2e-05  Score=69.32  Aligned_cols=79  Identities=16%  Similarity=0.190  Sum_probs=60.9

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      ..+.|++++|+|+ |+||+++++.+...|++|++++|++++.+.+.+..+..+.   .+..+.+++++++.       ..
T Consensus       164 ~~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~---~~~~~~~~l~~~l~-------~a  232 (377)
T 2vhw_A          164 PGVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIH---TRYSSAYELEGAVK-------RA  232 (377)
T ss_dssp             TTBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSE---EEECCHHHHHHHHH-------HC
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeE---eccCCHHHHHHHHc-------CC
Confidence            4678999999998 9999999999999999999999998877766655655432   23445555554443       57


Q ss_pred             cEEEeCCCCC
Q 024145           91 DIMYNNAGIL  100 (272)
Q Consensus        91 d~lv~~ag~~  100 (272)
                      |++|++++..
T Consensus       233 DvVi~~~~~p  242 (377)
T 2vhw_A          233 DLVIGAVLVP  242 (377)
T ss_dssp             SEEEECCCCT
T ss_pred             CEEEECCCcC
Confidence            9999988753

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=98.11  E-value=6.9e-06  Score=71.29  Aligned_cols=77  Identities=17%  Similarity=0.238  Sum_probs=57.5

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHh--CCcc
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKF--GKLD   91 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g~id   91 (272)
                      .|+++||+|++|++|.++++.+...|++|+++++++++.+.+ ++++...   .+|..+.+..    +++.+..  .++|
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~-~~~ga~~---~~d~~~~~~~----~~~~~~~~~~~~d  237 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRA-KALGADE---TVNYTHPDWP----KEVRRLTGGKGAD  237 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHHTCSE---EEETTSTTHH----HHHHHHTTTTCEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HhcCCCE---EEcCCcccHH----HHHHHHhCCCCce
Confidence            678999999999999999999999999999999988776655 4565432   2466654322    2233322  3699


Q ss_pred             EEEeCCC
Q 024145           92 IMYNNAG   98 (272)
Q Consensus        92 ~lv~~ag   98 (272)
                      ++|+++|
T Consensus       238 ~vi~~~g  244 (343)
T 2eih_A          238 KVVDHTG  244 (343)
T ss_dssp             EEEESSC
T ss_pred             EEEECCC
Confidence            9999998

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.10  E-value=1.6e-05  Score=59.18  Aligned_cols=75  Identities=19%  Similarity=0.329  Sum_probs=57.4

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEE
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMY   94 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv   94 (272)
                      +++++|+|+ |.+|..+++.|.+.|++|++++|+++..+.+.+..  .+.++..|.++.+.+.+.      ...+.|++|
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~--~~~~~~~d~~~~~~l~~~------~~~~~d~vi   74 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI--DALVINGDCTKIKTLEDA------GIEDADMYI   74 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC--SSEEEESCTTSHHHHHHT------TTTTCSEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhc--CcEEEEcCCCCHHHHHHc------CcccCCEEE
Confidence            457899987 99999999999999999999999887766655443  355678899887765321      123689999


Q ss_pred             eCCC
Q 024145           95 NNAG   98 (272)
Q Consensus        95 ~~ag   98 (272)
                      .+.+
T Consensus        75 ~~~~   78 (140)
T 1lss_A           75 AVTG   78 (140)
T ss_dssp             ECCS
T ss_pred             EeeC
Confidence            9874

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=98.09  E-value=6.6e-06  Score=70.09  Aligned_cols=78  Identities=17%  Similarity=0.190  Sum_probs=58.6

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      ++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++.+.++....    ++.+.+++       .+.....
T Consensus       138 ~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~----~~~~~~~~-------~~~~~~a  205 (297)
T 2egg_A          138 TLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRS----AYFSLAEA-------ETRLAEY  205 (297)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSC----CEECHHHH-------HHTGGGC
T ss_pred             CCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccC----ceeeHHHH-------HhhhccC
Confidence            578999999997 7999999999999998 899999999888888877754210    11122222       2233468


Q ss_pred             cEEEeCCCCCC
Q 024145           91 DIMYNNAGILD  101 (272)
Q Consensus        91 d~lv~~ag~~~  101 (272)
                      |+||++.+...
T Consensus       206 DivIn~t~~~~  216 (297)
T 2egg_A          206 DIIINTTSVGM  216 (297)
T ss_dssp             SEEEECSCTTC
T ss_pred             CEEEECCCCCC
Confidence            99999998643

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=98.06  E-value=7e-06  Score=70.95  Aligned_cols=78  Identities=19%  Similarity=0.353  Sum_probs=57.3

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHh--CCcc
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKF--GKLD   91 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g~id   91 (272)
                      .|+++||+||+|+||.++++.+...|++|+++++++++.+ ..++++....   .|..+.+..    +++.+..  .++|
T Consensus       148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~~~~ga~~~---~~~~~~~~~----~~~~~~~~~~g~D  219 (334)
T 3qwb_A          148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLK-IAKEYGAEYL---INASKEDIL----RQVLKFTNGKGVD  219 (334)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHHHTTCSEE---EETTTSCHH----HHHHHHTTTSCEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHcCCcEE---EeCCCchHH----HHHHHHhCCCCce
Confidence            6799999999999999999999999999999999887766 4455664422   344443332    2333322  2699


Q ss_pred             EEEeCCCC
Q 024145           92 IMYNNAGI   99 (272)
Q Consensus        92 ~lv~~ag~   99 (272)
                      ++|+++|.
T Consensus       220 ~vid~~g~  227 (334)
T 3qwb_A          220 ASFDSVGK  227 (334)
T ss_dssp             EEEECCGG
T ss_pred             EEEECCCh
Confidence            99999983

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=98.05  E-value=1.8e-05  Score=71.41  Aligned_cols=84  Identities=18%  Similarity=0.294  Sum_probs=64.7

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEe--c--------CCCHHHHHHHHHHH
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHC--D--------ISNEDEVINLVDTA   83 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~--D--------~~~~~~~~~~~~~~   83 (272)
                      .|+++||+||+|++|...++.+...|++|+++++++++.+.+ ++++....+-.-  |        ..+.++++.+.+++
T Consensus       228 ~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~-~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~i  306 (456)
T 3krt_A          228 QGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEIC-RAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRI  306 (456)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHH-HhhCCcEEEecCcCcccccccccccchHHHHHHHHHH
Confidence            678999999999999999998888999999998877766544 667654322211  1        24677788888888


Q ss_pred             HHHhC--CccEEEeCCC
Q 024145           84 VSKFG--KLDIMYNNAG   98 (272)
Q Consensus        84 ~~~~g--~id~lv~~ag   98 (272)
                      .+..+  ++|++|.++|
T Consensus       307 ~~~t~g~g~Dvvid~~G  323 (456)
T 3krt_A          307 RELTGGEDIDIVFEHPG  323 (456)
T ss_dssp             HHHHTSCCEEEEEECSC
T ss_pred             HHHhCCCCCcEEEEcCC
Confidence            87653  6999999997

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=98.04  E-value=1.1e-05  Score=69.98  Aligned_cols=78  Identities=19%  Similarity=0.209  Sum_probs=57.1

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHh--CCcc
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKF--GKLD   91 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g~id   91 (272)
                      .|+++||+|++++||..+++.+...|++|+++++++++.+.+ ++++....   +|..+.+..    +.+.+..  .++|
T Consensus       144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~lga~~~---~~~~~~~~~----~~~~~~~~~~g~D  215 (340)
T 3gms_A          144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEEL-LRLGAAYV---IDTSTAPLY----ETVMELTNGIGAD  215 (340)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHH-HHHTCSEE---EETTTSCHH----HHHHHHTTTSCEE
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HhCCCcEE---EeCCcccHH----HHHHHHhCCCCCc
Confidence            678999999999999999998888999999999988877654 44665432   344443332    2333322  2699


Q ss_pred             EEEeCCCC
Q 024145           92 IMYNNAGI   99 (272)
Q Consensus        92 ~lv~~ag~   99 (272)
                      ++|+++|.
T Consensus       216 vvid~~g~  223 (340)
T 3gms_A          216 AAIDSIGG  223 (340)
T ss_dssp             EEEESSCH
T ss_pred             EEEECCCC
Confidence            99999983

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=98.02  E-value=1.1e-05  Score=69.55  Aligned_cols=78  Identities=22%  Similarity=0.331  Sum_probs=57.3

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHh--CCcc
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKF--GKLD   91 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g~id   91 (272)
                      .|+++||+||+|+||.++++.+...|++|+++++++++.+.+ ++++...   ..|..+.+..    +++.+..  .++|
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~Ga~~---~~~~~~~~~~----~~~~~~~~~~g~D  211 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHA-KALGAWE---TIDYSHEDVA----KRVLELTDGKKCP  211 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH-HHHTCSE---EEETTTSCHH----HHHHHHTTTCCEE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCCCE---EEeCCCccHH----HHHHHHhCCCCce
Confidence            589999999999999999999999999999999988776644 4566432   2354443333    2333332  2699


Q ss_pred             EEEeCCCC
Q 024145           92 IMYNNAGI   99 (272)
Q Consensus        92 ~lv~~ag~   99 (272)
                      ++|+++|.
T Consensus       212 vvid~~g~  219 (325)
T 3jyn_A          212 VVYDGVGQ  219 (325)
T ss_dssp             EEEESSCG
T ss_pred             EEEECCCh
Confidence            99999984

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.98  E-value=1.9e-05  Score=68.46  Aligned_cols=77  Identities=22%  Similarity=0.391  Sum_probs=55.9

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhC--Ccc
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFG--KLD   91 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g--~id   91 (272)
                      .|+++||+||+|+||.++++.+...|++|+++++++++.+. .++++... ++  |..  +++   .+++.+..+  ++|
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~-~~~~ga~~-v~--~~~--~~~---~~~v~~~~~~~g~D  229 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEF-VKSVGADI-VL--PLE--EGW---AKAVREATGGAGVD  229 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHH-HHHHTCSE-EE--ESS--TTH---HHHHHHHTTTSCEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHH-HHhcCCcE-Ee--cCc--hhH---HHHHHHHhCCCCce
Confidence            68899999999999999999999999999999998877654 44566542 22  333  222   233344332  599


Q ss_pred             EEEeCCCC
Q 024145           92 IMYNNAGI   99 (272)
Q Consensus        92 ~lv~~ag~   99 (272)
                      ++|+++|.
T Consensus       230 vvid~~g~  237 (342)
T 4eye_A          230 MVVDPIGG  237 (342)
T ss_dssp             EEEESCC-
T ss_pred             EEEECCch
Confidence            99999983

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.95  E-value=1.1e-05  Score=68.65  Aligned_cols=91  Identities=14%  Similarity=0.177  Sum_probs=61.7

Q ss_pred             CCCCcE-EEEeCC-C-----------------ChHHHHHHHHHHHcCCeEEEeecCcchH--------HHHHHH------
Q 024145           12 RLEGKV-AIITGG-A-----------------SGIGAMAVELFHENGAKVVIADVQDKLG--------EDLADK------   58 (272)
Q Consensus        12 ~l~~k~-vlItGa-s-----------------~giG~aia~~la~~G~~V~~~~r~~~~~--------~~~~~~------   58 (272)
                      ++.||+ ||||+| |                 |-.|.++|++++++|+.|+++.+.....        ..+.+.      
T Consensus        33 ~l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~sl~p~~r~~~~~~~~~~~~~~~~  112 (313)
T 1p9o_A           33 GAQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARSAFPYAHRFPPQTWLSALRPSGP  112 (313)
T ss_dssp             HHTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTSCCTTGGGSCHHHHHHHCEECCC
T ss_pred             hhcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCCcCcchhccCccchhhhhccccc
Confidence            367877 999955 5                 5599999999999999999988753311        011111      


Q ss_pred             hCCceEEEEecCCCHHHHHHHHHHH------------------------------HHHhCCccEEEeCCCCCCC
Q 024145           59 LGQDVCYIHCDISNEDEVINLVDTA------------------------------VSKFGKLDIMYNNAGILDR  102 (272)
Q Consensus        59 ~~~~~~~~~~D~~~~~~~~~~~~~~------------------------------~~~~g~id~lv~~ag~~~~  102 (272)
                      .+..+..+..|+...+++.+++...                              .+.++..|++|++|++...
T Consensus       113 ~~~~~~~i~v~v~sa~~m~~av~~~~~~~~~~~l~~i~f~tv~eyl~~L~~~~~~l~~~~~~di~i~aAAVsDf  186 (313)
T 1p9o_A          113 ALSGLLSLEAEENALPGFAEALRSYQEAAAAGTFLVVEFTTLADYLHLLQAAAQALNPLGPSAMFYLAAAVSDF  186 (313)
T ss_dssp             -CCSEEEEEEETTTSTTHHHHHHHHHHHHHHTCEEEEEECBHHHHHHHHHHHHHHHGGGGGGEEEEECSBCCSE
T ss_pred             cccccceeeeccccHHHHHHHHHHHhhhhccccceeeccccHHHHHHHHHHhhHHhhccCCCCEEEECCchhhc
Confidence            1133456777777766666555433                              2345789999999998765

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.92  E-value=2.5e-05  Score=59.73  Aligned_cols=77  Identities=17%  Similarity=0.233  Sum_probs=57.4

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDI   92 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   92 (272)
                      ..+++++|.|+ |.+|..+++.|.+.|++|++++|+++..+.+.+.  ....++..|..+++.++++      .....|+
T Consensus        17 ~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~--~g~~~~~~d~~~~~~l~~~------~~~~ad~   87 (155)
T 2g1u_A           17 QKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSE--FSGFTVVGDAAEFETLKEC------GMEKADM   87 (155)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTT--CCSEEEESCTTSHHHHHTT------TGGGCSE
T ss_pred             cCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhc--CCCcEEEecCCCHHHHHHc------CcccCCE
Confidence            46788999996 9999999999999999999999988766543212  2345677888887654321      1236899


Q ss_pred             EEeCCC
Q 024145           93 MYNNAG   98 (272)
Q Consensus        93 lv~~ag   98 (272)
                      +|.+.+
T Consensus        88 Vi~~~~   93 (155)
T 2g1u_A           88 VFAFTN   93 (155)
T ss_dssp             EEECSS
T ss_pred             EEEEeC
Confidence            999886

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.91  E-value=2.6e-05  Score=65.40  Aligned_cols=75  Identities=19%  Similarity=0.244  Sum_probs=57.2

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHHHHHHHhCC-ceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGEDLADKLGQ-DVCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      .++++|+++|+|+ ||+|++++.+|++.|+ +|++++|+.++.+++.++++. .+..+.  ..+   +.       .  .
T Consensus       116 ~~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~--~~~---l~-------~--~  180 (272)
T 3pwz_A          116 EPLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISR--YEA---LE-------G--Q  180 (272)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEEC--SGG---GT-------T--C
T ss_pred             CCccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEee--HHH---hc-------c--c
Confidence            3578999999997 7999999999999996 899999999998888887753 233332  211   11       1  3


Q ss_pred             CccEEEeCCCCC
Q 024145           89 KLDIMYNNAGIL  100 (272)
Q Consensus        89 ~id~lv~~ag~~  100 (272)
                      ..|+|||+....
T Consensus       181 ~~DivInaTp~g  192 (272)
T 3pwz_A          181 SFDIVVNATSAS  192 (272)
T ss_dssp             CCSEEEECSSGG
T ss_pred             CCCEEEECCCCC
Confidence            689999987653

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.91  E-value=4.7e-05  Score=66.60  Aligned_cols=78  Identities=23%  Similarity=0.273  Sum_probs=57.9

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   91 (272)
                      .+++++++|+|+ |++|+++++.+...|++|++++|++++.+.+.+.....+..+   ..+.+++.+.+.       ..|
T Consensus       164 ~l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~~~-------~~D  232 (361)
T 1pjc_A          164 GVKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELL---YSNSAEIETAVA-------EAD  232 (361)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEE---ECCHHHHHHHHH-------TCS
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCceeEee---eCCHHHHHHHHc-------CCC
Confidence            467799999999 999999999999999999999999888776655443333222   234444433222       689


Q ss_pred             EEEeCCCCC
Q 024145           92 IMYNNAGIL  100 (272)
Q Consensus        92 ~lv~~ag~~  100 (272)
                      ++|++++..
T Consensus       233 vVI~~~~~~  241 (361)
T 1pjc_A          233 LLIGAVLVP  241 (361)
T ss_dssp             EEEECCCCT
T ss_pred             EEEECCCcC
Confidence            999999864

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.90  E-value=3.6e-05  Score=67.42  Aligned_cols=75  Identities=20%  Similarity=0.288  Sum_probs=57.4

Q ss_pred             CCCC--cEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024145           12 RLEG--KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGK   89 (272)
Q Consensus        12 ~l~~--k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (272)
                      +++|  ++|+|.|| |++|+.+++.|++ .++|.+.+++.+.++.+    ...+..+.+|+.|.+++++++.       +
T Consensus        11 ~~~g~~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~----~~~~~~~~~d~~d~~~l~~~~~-------~   77 (365)
T 3abi_A           11 HIEGRHMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKV----KEFATPLKVDASNFDKLVEVMK-------E   77 (365)
T ss_dssp             -----CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHH----TTTSEEEECCTTCHHHHHHHHT-------T
T ss_pred             cccCCccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHH----hccCCcEEEecCCHHHHHHHHh-------C
Confidence            3455  47999998 9999999998865 57899999987765543    3456778999999998877665       6


Q ss_pred             ccEEEeCCCC
Q 024145           90 LDIMYNNAGI   99 (272)
Q Consensus        90 id~lv~~ag~   99 (272)
                      .|+||++++.
T Consensus        78 ~DvVi~~~p~   87 (365)
T 3abi_A           78 FELVIGALPG   87 (365)
T ss_dssp             CSEEEECCCG
T ss_pred             CCEEEEecCC
Confidence            8999998864

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=97.88  E-value=7.1e-05  Score=65.01  Aligned_cols=78  Identities=18%  Similarity=0.218  Sum_probs=55.5

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEE
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMY   94 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv   94 (272)
                      ++++||+||+|+||.+.++.+...|++|+++++++++.+.+ ++++....   .|..+.+..+.+.+....  .++|++|
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~~Ga~~~---~~~~~~~~~~~v~~~~~~--~g~D~vi  238 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALL-KDIGAAHV---LNEKAPDFEATLREVMKA--EQPRIFL  238 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHH-HHHTCSEE---EETTSTTHHHHHHHHHHH--HCCCEEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCCCEE---EECCcHHHHHHHHHHhcC--CCCcEEE
Confidence            38999999999999999999988999999999988876644 45665422   344443332222222211  2699999


Q ss_pred             eCCC
Q 024145           95 NNAG   98 (272)
Q Consensus        95 ~~ag   98 (272)
                      .++|
T Consensus       239 d~~g  242 (349)
T 3pi7_A          239 DAVT  242 (349)
T ss_dssp             ESSC
T ss_pred             ECCC
Confidence            9998

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.85  E-value=2.2e-05  Score=66.25  Aligned_cols=74  Identities=14%  Similarity=0.233  Sum_probs=56.9

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHHHHHHHhCC--ceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGEDLADKLGQ--DVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      .++++|+++|+|+ ||+|++++.+|++.|+ +|++++|+.++.+++.++++.  .+.....+  +   +.          
T Consensus       122 ~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~--~---l~----------  185 (281)
T 3o8q_A          122 VLLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFE--Q---LK----------  185 (281)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGG--G---CC----------
T ss_pred             CCccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHH--H---hc----------
Confidence            3578999999997 7999999999999996 899999999888888877653  23433321  1   10          


Q ss_pred             CCccEEEeCCCCC
Q 024145           88 GKLDIMYNNAGIL  100 (272)
Q Consensus        88 g~id~lv~~ag~~  100 (272)
                      ...|+||++.+..
T Consensus       186 ~~aDiIInaTp~g  198 (281)
T 3o8q_A          186 QSYDVIINSTSAS  198 (281)
T ss_dssp             SCEEEEEECSCCC
T ss_pred             CCCCEEEEcCcCC
Confidence            2689999988653

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=97.81  E-value=0.00037  Score=59.64  Aligned_cols=143  Identities=15%  Similarity=0.138  Sum_probs=87.3

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCC--eEEEeec--CcchHHH----HHHHh---CCceEEEEecCCCHHHHHHHHHHHHH
Q 024145           17 VAIITGGASGIGAMAVELFHENGA--KVVIADV--QDKLGED----LADKL---GQDVCYIHCDISNEDEVINLVDTAVS   85 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~--~V~~~~r--~~~~~~~----~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (272)
                      +++||||+|++|.+++..|+.+|.  ++.+.++  ++++.+.    +.+..   +..+.+...|    +++.       +
T Consensus         2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~----d~l~-------~   70 (313)
T 1hye_A            2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES----DENL-------R   70 (313)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE----TTCG-------G
T ss_pred             EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC----cchH-------H
Confidence            689999999999999999999884  5888887  5443322    22211   1122222211    0111       1


Q ss_pred             HhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccccc--------ccC
Q 024145           86 KFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTE--------IAG  157 (272)
Q Consensus        86 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~--------~~~  157 (272)
                      .+.+.|++||.||....+     ..+.   ...+..|+.....+++.+..+-    .+.++++|.....        .+.
T Consensus        71 al~gaD~Vi~~Ag~~~~~-----g~~r---~dl~~~N~~i~~~i~~~i~~~~----~~~vlv~SNPv~~~t~~~~k~~~~  138 (313)
T 1hye_A           71 IIDESDVVIITSGVPRKE-----GMSR---MDLAKTNAKIVGKYAKKIAEIC----DTKIFVITNPVDVMTYKALVDSKF  138 (313)
T ss_dssp             GGTTCSEEEECCSCCCCT-----TCCH---HHHHHHHHHHHHHHHHHHHHHC----CCEEEECSSSHHHHHHHHHHHHCC
T ss_pred             HhCCCCEEEECCCCCCCC-----CCcH---HHHHHHHHHHHHHHHHHHHHhC----CeEEEEecCcHHHHHHHHHHhhCc
Confidence            233799999999965321     1222   3458899999999988887653    3445555543321        234


Q ss_pred             CCCchhhh-hHHHHHHHHHHHHHHhc
Q 024145          158 LGSPAYTI-SKYGILGLVKCLAAELG  182 (272)
Q Consensus       158 ~~~~~Y~~-sK~a~~~~~~~la~e~~  182 (272)
                      |....++. +..--..+...++..+.
T Consensus       139 p~~rviG~gt~LD~~r~~~~la~~lg  164 (313)
T 1hye_A          139 ERNQVFGLGTHLDSLRFKVAIAKFFG  164 (313)
T ss_dssp             CTTSEEECTTHHHHHHHHHHHHHHHT
T ss_pred             ChhcEEEeCccHHHHHHHHHHHHHhC
Confidence            55556776 55555666667777664

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.81  E-value=5.9e-05  Score=64.12  Aligned_cols=74  Identities=19%  Similarity=0.236  Sum_probs=54.3

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      .|+++||+|++|++|..+++.+...|++|+++++++++.+.. ++++...   ..|..+.+++   .+.+    +++|++
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~ga~~---~~~~~~~~~~---~~~~----~~~d~v  193 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALP-LALGAEE---AATYAEVPER---AKAW----GGLDLV  193 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHH-HHTTCSE---EEEGGGHHHH---HHHT----TSEEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HhcCCCE---EEECCcchhH---HHHh----cCceEE
Confidence            678999999999999999999999999999999988776654 4566432   2354441222   2222    479999


Q ss_pred             EeCCCC
Q 024145           94 YNNAGI   99 (272)
Q Consensus        94 v~~ag~   99 (272)
                      |+ +|.
T Consensus       194 id-~g~  198 (302)
T 1iz0_A          194 LE-VRG  198 (302)
T ss_dssp             EE-CSC
T ss_pred             EE-CCH
Confidence            99 873

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.78  E-value=5.1e-05  Score=66.33  Aligned_cols=78  Identities=26%  Similarity=0.366  Sum_probs=55.2

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      .|+++||+||+|+||..+++.+...|++|+++++++++.+.+ ++++... +  +|..+. ++.+.+.+..  .+++|++
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~-~~~Ga~~-~--~~~~~~-~~~~~~~~~~--~~g~D~v  235 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFL-KSLGCDR-P--INYKTE-PVGTVLKQEY--PEGVDVV  235 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTTCSE-E--EETTTS-CHHHHHHHHC--TTCEEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHH-HHcCCcE-E--EecCCh-hHHHHHHHhc--CCCCCEE
Confidence            678999999999999999999999999999999987766544 4466442 2  244332 2222222221  1369999


Q ss_pred             EeCCC
Q 024145           94 YNNAG   98 (272)
Q Consensus        94 v~~ag   98 (272)
                      |+++|
T Consensus       236 id~~g  240 (362)
T 2c0c_A          236 YESVG  240 (362)
T ss_dssp             EECSC
T ss_pred             EECCC
Confidence            99997

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.78  E-value=8.7e-05  Score=64.19  Aligned_cols=77  Identities=27%  Similarity=0.299  Sum_probs=55.9

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      .|+++||+|+ |++|..+++.+...|++|+++++++++.+.+ ++++...   .+|..+.+ +.+   ++.+..+++|++
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~lGa~~---~~d~~~~~-~~~---~~~~~~~~~d~v  234 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELA-KELGADL---VVNPLKED-AAK---FMKEKVGGVHAA  234 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHH-HHTTCSE---EECTTTSC-HHH---HHHHHHSSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHCCCCE---EecCCCcc-HHH---HHHHHhCCCCEE
Confidence            5789999999 8899999999999999999999988776644 4566432   24665432 222   222222579999


Q ss_pred             EeCCCC
Q 024145           94 YNNAGI   99 (272)
Q Consensus        94 v~~ag~   99 (272)
                      |+++|.
T Consensus       235 id~~g~  240 (339)
T 1rjw_A          235 VVTAVS  240 (339)
T ss_dssp             EESSCC
T ss_pred             EECCCC
Confidence            999983

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.73  E-value=6.4e-05  Score=65.16  Aligned_cols=76  Identities=22%  Similarity=0.448  Sum_probs=53.0

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      .|+++||+||+|+||..+++.+...|++|+++ +++++.+ ..++++...    +| .+.+ +.+.+.+... ..++|++
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~-~~~~lGa~~----i~-~~~~-~~~~~~~~~~-~~g~D~v  220 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLE-YVRDLGATP----ID-ASRE-PEDYAAEHTA-GQGFDLV  220 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHH-HHHHHTSEE----EE-TTSC-HHHHHHHHHT-TSCEEEE
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHH-HHHHcCCCE----ec-cCCC-HHHHHHHHhc-CCCceEE
Confidence            67899999999999999999999999999998 6666554 446676543    34 3222 2222222211 1369999


Q ss_pred             EeCCC
Q 024145           94 YNNAG   98 (272)
Q Consensus        94 v~~ag   98 (272)
                      |.++|
T Consensus       221 id~~g  225 (343)
T 3gaz_A          221 YDTLG  225 (343)
T ss_dssp             EESSC
T ss_pred             EECCC
Confidence            99997

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.73  E-value=2e-05  Score=59.52  Aligned_cols=72  Identities=17%  Similarity=0.224  Sum_probs=55.1

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      .+++++|.|+ |++|+++++.|.+.|++|++.+|++++.+++.++++..+  .  +..+.+   +++.       ..|++
T Consensus        20 ~~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~~--~--~~~~~~---~~~~-------~~Div   84 (144)
T 3oj0_A           20 GGNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYEY--V--LINDID---SLIK-------NNDVI   84 (144)
T ss_dssp             CCCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCEE--E--ECSCHH---HHHH-------TCSEE
T ss_pred             cCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCce--E--eecCHH---HHhc-------CCCEE
Confidence            3889999996 999999999999999999999999998888887776321  1  223332   2222       68999


Q ss_pred             EeCCCCC
Q 024145           94 YNNAGIL  100 (272)
Q Consensus        94 v~~ag~~  100 (272)
                      |.+.+..
T Consensus        85 i~at~~~   91 (144)
T 3oj0_A           85 ITATSSK   91 (144)
T ss_dssp             EECSCCS
T ss_pred             EEeCCCC
Confidence            9998753

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.72  E-value=5.4e-05  Score=59.40  Aligned_cols=78  Identities=13%  Similarity=0.138  Sum_probs=58.8

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHc-CCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHEN-GAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      ++.+++++|.| .|.+|..+++.|.+. |++|++++++++..+.+.+ .  .+.++..|.++++.++++     ....+.
T Consensus        36 ~~~~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~-~--g~~~~~gd~~~~~~l~~~-----~~~~~a  106 (183)
T 3c85_A           36 NPGHAQVLILG-MGRIGTGAYDELRARYGKISLGIEIREEAAQQHRS-E--GRNVISGDATDPDFWERI-----LDTGHV  106 (183)
T ss_dssp             CCTTCSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH-T--TCCEEECCTTCHHHHHTB-----CSCCCC
T ss_pred             CCCCCcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH-C--CCCEEEcCCCCHHHHHhc-----cCCCCC
Confidence            35567788888 599999999999999 9999999999877665543 2  356678899988765432     012368


Q ss_pred             cEEEeCCC
Q 024145           91 DIMYNNAG   98 (272)
Q Consensus        91 d~lv~~ag   98 (272)
                      |.+|.+.+
T Consensus       107 d~vi~~~~  114 (183)
T 3c85_A          107 KLVLLAMP  114 (183)
T ss_dssp             CEEEECCS
T ss_pred             CEEEEeCC
Confidence            99998775

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.72  E-value=0.00012  Score=64.00  Aligned_cols=75  Identities=23%  Similarity=0.330  Sum_probs=57.8

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      .|+++||+|+ |+||..+++.+...|++|+++++++++.+.+.++++...   .+|..+.+.+++       ..+++|++
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~---v~~~~~~~~~~~-------~~~~~D~v  255 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADS---FLVSRDQEQMQA-------AAGTLDGI  255 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSE---EEETTCHHHHHH-------TTTCEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCce---EEeccCHHHHHH-------hhCCCCEE
Confidence            6899999996 999999999998999999999998887776665676542   246666543322       23579999


Q ss_pred             EeCCCC
Q 024145           94 YNNAGI   99 (272)
Q Consensus        94 v~~ag~   99 (272)
                      |.++|.
T Consensus       256 id~~g~  261 (366)
T 1yqd_A          256 IDTVSA  261 (366)
T ss_dssp             EECCSS
T ss_pred             EECCCc
Confidence            999984

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.71  E-value=0.00017  Score=54.01  Aligned_cols=73  Identities=12%  Similarity=0.158  Sum_probs=57.9

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEe
Q 024145           16 KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYN   95 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~   95 (272)
                      +.++|.|+ |.+|..+++.|.+.|++|++++++++..+.+.+   ..+.++..|.++++.++++      ...+.|.+|.
T Consensus         8 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~---~g~~~i~gd~~~~~~l~~a------~i~~ad~vi~   77 (140)
T 3fwz_A            8 NHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRE---RGVRAVLGNAANEEIMQLA------HLECAKWLIL   77 (140)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH---TTCEEEESCTTSHHHHHHT------TGGGCSEEEE
T ss_pred             CCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH---cCCCEEECCCCCHHHHHhc------CcccCCEEEE
Confidence            36777786 899999999999999999999999887766554   3567889999999876543      1126799888


Q ss_pred             CCC
Q 024145           96 NAG   98 (272)
Q Consensus        96 ~ag   98 (272)
                      +.+
T Consensus        78 ~~~   80 (140)
T 3fwz_A           78 TIP   80 (140)
T ss_dssp             CCS
T ss_pred             ECC
Confidence            775

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.70  E-value=0.00011  Score=63.71  Aligned_cols=76  Identities=21%  Similarity=0.386  Sum_probs=55.0

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHh-CCccE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKF-GKLDI   92 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~id~   92 (272)
                      .|+++||+||+|++|...++.+...|++|+++++++++.+.+ ++++....   .|..+  ++   .+++.+.. +++|+
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~lGa~~v---i~~~~--~~---~~~~~~~~~~g~Dv  220 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWT-KKMGADIV---LNHKE--SL---LNQFKTQGIELVDY  220 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHH-HHHTCSEE---ECTTS--CH---HHHHHHHTCCCEEE
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HhcCCcEE---EECCc--cH---HHHHHHhCCCCccE
Confidence            589999999999999999999999999999999987766544 44664322   23332  22   22333322 36999


Q ss_pred             EEeCCC
Q 024145           93 MYNNAG   98 (272)
Q Consensus        93 lv~~ag   98 (272)
                      +|.++|
T Consensus       221 v~d~~g  226 (346)
T 3fbg_A          221 VFCTFN  226 (346)
T ss_dssp             EEESSC
T ss_pred             EEECCC
Confidence            999987

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=97.69  E-value=0.00073  Score=57.53  Aligned_cols=110  Identities=15%  Similarity=0.058  Sum_probs=69.3

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCC--eEEEeec--CcchHHHHHHHh------CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024145           17 VAIITGGASGIGAMAVELFHENGA--KVVIADV--QDKLGEDLADKL------GQDVCYIHCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~--~V~~~~r--~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (272)
                      +++||||+|++|.+++..|+..|.  ++++.++  ++++.+.....+      ...+.+.. |  +.+           .
T Consensus         2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~~~-----------a   67 (303)
T 1o6z_A            2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--GYE-----------D   67 (303)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--CGG-----------G
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--CHH-----------H
Confidence            689999999999999999999885  6888888  554433212111      12222222 2  211           1


Q ss_pred             hCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecc
Q 024145           87 FGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASA  151 (272)
Q Consensus        87 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~  151 (272)
                      +.+.|++|+.+|....+     ..+..   ..+..|+.....+++.+..+   ...+.|+++|-.
T Consensus        68 ~~~aDvVi~~ag~~~~~-----g~~r~---dl~~~N~~i~~~i~~~i~~~---~p~~~viv~SNP  121 (303)
T 1o6z_A           68 TAGSDVVVITAGIPRQP-----GQTRI---DLAGDNAPIMEDIQSSLDEH---NDDYISLTTSNP  121 (303)
T ss_dssp             GTTCSEEEECCCCCCCT-----TCCHH---HHHHHHHHHHHHHHHHHHTT---CSCCEEEECCSS
T ss_pred             hCCCCEEEEcCCCCCCC-----CCCHH---HHHHHHHHHHHHHHHHHHHH---CCCcEEEEeCCh
Confidence            33799999999965321     22332   45788999888888877654   234555554443

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=97.62  E-value=0.00028  Score=61.55  Aligned_cols=81  Identities=19%  Similarity=0.263  Sum_probs=60.4

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCe-EEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHh--CCc
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAK-VVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKF--GKL   90 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g~i   90 (272)
                      .|+++||+|+ |++|...++.+...|++ |+++++++++.+.+.+ +...+..+..|-.+.+++.+   ++.+..  .++
T Consensus       179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~-l~~~~~~~~~~~~~~~~~~~---~v~~~t~g~g~  253 (363)
T 3m6i_A          179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAKE-ICPEVVTHKVERLSAEESAK---KIVESFGGIEP  253 (363)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHH-HCTTCEEEECCSCCHHHHHH---HHHHHTSSCCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-hchhcccccccccchHHHHH---HHHHHhCCCCC
Confidence            5789999998 99999999888888997 8999988877765544 45466666666666666543   344433  269


Q ss_pred             cEEEeCCCC
Q 024145           91 DIMYNNAGI   99 (272)
Q Consensus        91 d~lv~~ag~   99 (272)
                      |++|.+.|.
T Consensus       254 Dvvid~~g~  262 (363)
T 3m6i_A          254 AVALECTGV  262 (363)
T ss_dssp             SEEEECSCC
T ss_pred             CEEEECCCC
Confidence            999999983

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.62  E-value=0.0002  Score=62.79  Aligned_cols=76  Identities=26%  Similarity=0.411  Sum_probs=53.6

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      .|+++||+||+|++|..+++.+...|++|+++++ +++.+ ..++++....   +|..+.+..    +++.+ .+++|++
T Consensus       183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~~~~-~~~~lGa~~v---~~~~~~~~~----~~~~~-~~g~D~v  252 (375)
T 2vn8_A          183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-QDASE-LVRKLGADDV---IDYKSGSVE----EQLKS-LKPFDFI  252 (375)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-GGGHH-HHHHTTCSEE---EETTSSCHH----HHHHT-SCCBSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-hHHHH-HHHHcCCCEE---EECCchHHH----HHHhh-cCCCCEE
Confidence            6789999999999999999988889999988884 44443 4466765422   344443222    22322 2579999


Q ss_pred             EeCCCC
Q 024145           94 YNNAGI   99 (272)
Q Consensus        94 v~~ag~   99 (272)
                      |.++|.
T Consensus       253 id~~g~  258 (375)
T 2vn8_A          253 LDNVGG  258 (375)
T ss_dssp             EESSCT
T ss_pred             EECCCC
Confidence            999984

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=97.60  E-value=0.00021  Score=63.42  Aligned_cols=74  Identities=19%  Similarity=0.389  Sum_probs=56.7

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      ++.|++++|.|+ |++|+.+++.|...|+ +|++++|+.++.+++.++++..  .  .+.   +++.+++       ...
T Consensus       164 ~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~--~--~~~---~~l~~~l-------~~a  228 (404)
T 1gpj_A          164 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGE--A--VRF---DELVDHL-------ARS  228 (404)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCE--E--CCG---GGHHHHH-------HTC
T ss_pred             cccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCc--e--ecH---HhHHHHh-------cCC
Confidence            478999999998 9999999999999998 8999999988877777777643  1  222   2333322       268


Q ss_pred             cEEEeCCCCC
Q 024145           91 DIMYNNAGIL  100 (272)
Q Consensus        91 d~lv~~ag~~  100 (272)
                      |++|.+.+..
T Consensus       229 DvVi~at~~~  238 (404)
T 1gpj_A          229 DVVVSATAAP  238 (404)
T ss_dssp             SEEEECCSSS
T ss_pred             CEEEEccCCC
Confidence            9999998743

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=97.55  E-value=0.00095  Score=55.71  Aligned_cols=66  Identities=15%  Similarity=0.189  Sum_probs=52.4

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEE
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMY   94 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv   94 (272)
                      +|+++|.|+ ||.|++++.+|++.|.+|+++.|+.++.+++. +++  +...  +..+.              ...|++|
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~~--~~~~--~~~~l--------------~~~DiVI  177 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RLG--CDCF--MEPPK--------------SAFDLII  177 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HHT--CEEE--SSCCS--------------SCCSEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCC--CeEe--cHHHh--------------ccCCEEE
Confidence            899999996 99999999999999999999999999988887 665  2222  22221              1589999


Q ss_pred             eCCCCC
Q 024145           95 NNAGIL  100 (272)
Q Consensus        95 ~~ag~~  100 (272)
                      |+....
T Consensus       178 naTp~G  183 (269)
T 3phh_A          178 NATSAS  183 (269)
T ss_dssp             ECCTTC
T ss_pred             EcccCC
Confidence            987654

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.54  E-value=0.00022  Score=57.58  Aligned_cols=73  Identities=25%  Similarity=0.263  Sum_probs=59.1

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEeC
Q 024145           17 VAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNN   96 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~   96 (272)
                      +++|.|+ |.+|..+++.|.++|++|++++++++..+.+.+..  .+.++..|.++++.++++      ...+.|.+|.+
T Consensus         2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~--~~~~i~gd~~~~~~l~~a------~i~~ad~vi~~   72 (218)
T 3l4b_C            2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKL--KATIIHGDGSHKEILRDA------EVSKNDVVVIL   72 (218)
T ss_dssp             CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHS--SSEEEESCTTSHHHHHHH------TCCTTCEEEEC
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHc--CCeEEEcCCCCHHHHHhc------CcccCCEEEEe
Confidence            4889996 99999999999999999999999988877666553  467899999998876643      12368999877


Q ss_pred             CC
Q 024145           97 AG   98 (272)
Q Consensus        97 ag   98 (272)
                      .+
T Consensus        73 ~~   74 (218)
T 3l4b_C           73 TP   74 (218)
T ss_dssp             CS
T ss_pred             cC
Confidence            65

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=97.51  E-value=0.00055  Score=58.57  Aligned_cols=114  Identities=15%  Similarity=0.226  Sum_probs=70.5

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcC--CeEEEeecCcchHHHHHHHhCCceEEEEecCCC---HHHHHHHHHHHHHHhCCcc
Q 024145           17 VAIITGGASGIGAMAVELFHENG--AKVVIADVQDKLGEDLADKLGQDVCYIHCDISN---EDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~---~~~~~~~~~~~~~~~g~id   91 (272)
                      ++.|+||+|.+|..++..|++.|  .+|+++++++  .+....++.....  ..++..   .++.+++       +.+.|
T Consensus         2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~dL~~~~~--~~~l~~~~~t~d~~~a-------~~~aD   70 (314)
T 1mld_A            2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLSHIET--RATVKGYLGPEQLPDC-------LKGCD   70 (314)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHTTSSS--SCEEEEEESGGGHHHH-------HTTCS
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHHHhccCc--CceEEEecCCCCHHHH-------hCCCC
Confidence            68999999999999999999988  6899999987  2222223322110  011111   1122222       23789


Q ss_pred             EEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccc
Q 024145           92 IMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASAC  152 (272)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~  152 (272)
                      ++|+.+|....+ +    .+..   +.+..|+.....+.+.+.++-   ..++++++|-..
T Consensus        71 vVvi~ag~~~~~-g----~~r~---dl~~~n~~i~~~i~~~i~~~~---p~a~viv~sNPv  120 (314)
T 1mld_A           71 VVVIPAGVPRKP-G----MTRD---DLFNTNATIVATLTAACAQHC---PDAMICIISNPV  120 (314)
T ss_dssp             EEEECCSCCCCT-T----CCGG---GGHHHHHHHHHHHHHHHHHHC---TTSEEEECSSCH
T ss_pred             EEEECCCcCCCC-C----CcHH---HHHHHHHHHHHHHHHHHHhhC---CCeEEEEECCCc
Confidence            999999975431 1    1211   236777777777777666543   567888876543

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.48  E-value=0.00046  Score=57.02  Aligned_cols=78  Identities=18%  Similarity=0.343  Sum_probs=55.1

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCc-------------------chHHHHHHHh---CC--ceEEE
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQD-------------------KLGEDLADKL---GQ--DVCYI   66 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~-------------------~~~~~~~~~~---~~--~~~~~   66 (272)
                      ++++++|+|.|+ ||+|..+++.|++.|. ++.+++++.                   .+.+.+.+.+   +.  ++..+
T Consensus        28 ~l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~  106 (249)
T 1jw9_B           28 ALKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPV  106 (249)
T ss_dssp             HHHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEE
Confidence            467789999995 7999999999999997 799999886                   5555554443   33  34455


Q ss_pred             EecCCCHHHHHHHHHHHHHHhCCccEEEeCCC
Q 024145           67 HCDISNEDEVINLVDTAVSKFGKLDIMYNNAG   98 (272)
Q Consensus        67 ~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag   98 (272)
                      ..++. .+.+++++.       ..|++|.+..
T Consensus       107 ~~~~~-~~~~~~~~~-------~~DvVi~~~d  130 (249)
T 1jw9_B          107 NALLD-DAELAALIA-------EHDLVLDCTD  130 (249)
T ss_dssp             CSCCC-HHHHHHHHH-------TSSEEEECCS
T ss_pred             eccCC-HhHHHHHHh-------CCCEEEEeCC
Confidence            55564 344433333       6899998764

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=97.47  E-value=0.00091  Score=59.21  Aligned_cols=48  Identities=19%  Similarity=0.295  Sum_probs=40.7

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCC
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQ   61 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~   61 (272)
                      .+.+++++|+|+ |.+|+.+++.+...|++|+++++++...+.+ ++++.
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~-~~lGa  216 (401)
T 1x13_A          169 KVPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQV-QSMGA  216 (401)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHH-HHTTC
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH-HHcCC
Confidence            367899999996 8999999999999999999999998877665 45554

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.46  E-value=3.8e-05  Score=64.56  Aligned_cols=71  Identities=14%  Similarity=0.138  Sum_probs=51.0

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      ++++|+++|+|+ ||+|++++..|++.|+ +|+++.|+.++.+++.+    .+..+     ..++...+       ....
T Consensus       114 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~----~~~~~-----~~~~~~~~-------~~~a  176 (277)
T 3don_A          114 GIEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWSL----NINKI-----NLSHAESH-------LDEF  176 (277)
T ss_dssp             TGGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCS----CCEEE-----CHHHHHHT-------GGGC
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH----hcccc-----cHhhHHHH-------hcCC
Confidence            578999999997 7999999999999998 89999999877654432    22222     22332221       2368


Q ss_pred             cEEEeCCCC
Q 024145           91 DIMYNNAGI   99 (272)
Q Consensus        91 d~lv~~ag~   99 (272)
                      |+||++...
T Consensus       177 DiVInaTp~  185 (277)
T 3don_A          177 DIIINTTPA  185 (277)
T ss_dssp             SEEEECCC-
T ss_pred             CEEEECccC
Confidence            999998764

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=97.40  E-value=0.00048  Score=59.46  Aligned_cols=76  Identities=25%  Similarity=0.367  Sum_probs=55.2

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      .|+++||+|+ |++|...++.+...|++|+++++++++.+ ..++++....   .|..+.+..    +.+.+..+++|++
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~-~~~~lGa~~~---i~~~~~~~~----~~~~~~~g~~d~v  236 (340)
T 3s2e_A          166 PGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLN-LARRLGAEVA---VNARDTDPA----AWLQKEIGGAHGV  236 (340)
T ss_dssp             TTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHTTCSEE---EETTTSCHH----HHHHHHHSSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHH-HHHHcCCCEE---EeCCCcCHH----HHHHHhCCCCCEE
Confidence            6789999997 89999999888889999999999887765 4456665432   344443322    2333344689999


Q ss_pred             EeCCC
Q 024145           94 YNNAG   98 (272)
Q Consensus        94 v~~ag   98 (272)
                      |.++|
T Consensus       237 id~~g  241 (340)
T 3s2e_A          237 LVTAV  241 (340)
T ss_dssp             EESSC
T ss_pred             EEeCC
Confidence            99987

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=97.39  E-value=0.0003  Score=60.88  Aligned_cols=120  Identities=12%  Similarity=0.072  Sum_probs=69.8

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCC--eEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGA--KVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      ++++++.|+|++|++|..++..++..|.  +|++++.++++.+....++.... +...++.-..+..+       .+.+.
T Consensus         6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~-~~~~~i~~t~d~~~-------al~dA   77 (343)
T 3fi9_A            6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCG-FEGLNLTFTSDIKE-------ALTDA   77 (343)
T ss_dssp             SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHC-CTTCCCEEESCHHH-------HHTTE
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCc-CCCCceEEcCCHHH-------HhCCC
Confidence            5678999999999999999999999984  79999998765553322221100 00011110011111       12378


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCce-EEEEecc
Q 024145           91 DIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGC-ILFTASA  151 (272)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~-iv~iss~  151 (272)
                      |++|..+|....+     ..+   -.+.++.|+.-...+.+.+..+-   ..+. ++.+|-.
T Consensus        78 DvVvitaG~p~kp-----G~~---R~dLl~~N~~I~~~i~~~i~~~~---p~a~~vlvvsNP  128 (343)
T 3fi9_A           78 KYIVSSGGAPRKE-----GMT---REDLLKGNAEIAAQLGKDIKSYC---PDCKHVIIIFNP  128 (343)
T ss_dssp             EEEEECCC------------C---HHHHHHHHHHHHHHHHHHHHHHC---TTCCEEEECSSS
T ss_pred             CEEEEccCCCCCC-----CCC---HHHHHHHHHHHHHHHHHHHHHhc---cCcEEEEEecCc
Confidence            9999999964321     112   23456777776666666655543   4564 6666554

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.36  E-value=0.00034  Score=60.64  Aligned_cols=77  Identities=26%  Similarity=0.414  Sum_probs=54.8

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHh--CCc
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKF--GKL   90 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g~i   90 (272)
                      .|+++||+|+ |++|..+++.+...|+ +|+++++++++.+.+ ++++...   ..|..+.+ +   .+++.+..  ..+
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~-~~~Ga~~---~~~~~~~~-~---~~~v~~~~~g~g~  237 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELA-KKVGADY---VINPFEED-V---VKEVMDITDGNGV  237 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHH-HHHTCSE---EECTTTSC-H---HHHHHHHTTTSCE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHhCCCE---EECCCCcC-H---HHHHHHHcCCCCC
Confidence            7889999999 9999999999888999 899999987765544 4566432   23544422 2   23333322  259


Q ss_pred             cEEEeCCCC
Q 024145           91 DIMYNNAGI   99 (272)
Q Consensus        91 d~lv~~ag~   99 (272)
                      |++|.++|.
T Consensus       238 D~vid~~g~  246 (348)
T 2d8a_A          238 DVFLEFSGA  246 (348)
T ss_dssp             EEEEECSCC
T ss_pred             CEEEECCCC
Confidence            999999983

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=97.35  E-value=0.00088  Score=58.60  Aligned_cols=78  Identities=12%  Similarity=0.131  Sum_probs=55.0

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHh-CCcc
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKF-GKLD   91 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~id   91 (272)
                      ..|+++||+||+|++|...++.+...|++|+.+. ++++.+ +.++++....   +|..+.+-    .+++.+.. +++|
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~-~~~~lGa~~v---i~~~~~~~----~~~v~~~t~g~~d  233 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFD-LAKSRGAEEV---FDYRAPNL----AQTIRTYTKNNLR  233 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHH-HHHHTTCSEE---EETTSTTH----HHHHHHHTTTCCC
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHH-HHHHcCCcEE---EECCCchH----HHHHHHHccCCcc
Confidence            4789999999999999999998888999998886 444444 6677775322   24444332    23333332 4699


Q ss_pred             EEEeCCCC
Q 024145           92 IMYNNAGI   99 (272)
Q Consensus        92 ~lv~~ag~   99 (272)
                      ++|.+.|.
T Consensus       234 ~v~d~~g~  241 (371)
T 3gqv_A          234 YALDCITN  241 (371)
T ss_dssp             EEEESSCS
T ss_pred             EEEECCCc
Confidence            99999984

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=97.34  E-value=0.00024  Score=60.97  Aligned_cols=75  Identities=16%  Similarity=0.203  Sum_probs=50.7

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEeC
Q 024145           17 VAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNN   96 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~   96 (272)
                      ++||+|++|++|...++.+...|++|+++++++++.+.+ ++++....   +|..+.+  .+.+.++.  .+++|++|.+
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~-~~lGa~~~---i~~~~~~--~~~~~~~~--~~~~d~vid~  223 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYL-RVLGAKEV---LAREDVM--AERIRPLD--KQRWAAAVDP  223 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHH-HHTTCSEE---EECC-----------CC--SCCEEEEEEC
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-HHcCCcEE---EecCCcH--HHHHHHhc--CCcccEEEEC
Confidence            799999999999999998888999999999987776544 55665422   3444332  11122221  2369999999


Q ss_pred             CCC
Q 024145           97 AGI   99 (272)
Q Consensus        97 ag~   99 (272)
                      +|.
T Consensus       224 ~g~  226 (328)
T 1xa0_A          224 VGG  226 (328)
T ss_dssp             STT
T ss_pred             CcH
Confidence            983

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=97.33  E-value=0.00053  Score=59.82  Aligned_cols=76  Identities=18%  Similarity=0.323  Sum_probs=54.4

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHh--CCcc
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKF--GKLD   91 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g~id   91 (272)
                      .|+++||+| +|++|...++.+...|++|+++++++++.+. .++++....   .| .+.+++.+   ++.+..  .++|
T Consensus       189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~-~~~lGa~~v---i~-~~~~~~~~---~v~~~~~g~g~D  259 (363)
T 3uog_A          189 AGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDR-AFALGADHG---IN-RLEEDWVE---RVYALTGDRGAD  259 (363)
T ss_dssp             TTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHTCSEE---EE-TTTSCHHH---HHHHHHTTCCEE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHH-HHHcCCCEE---Ec-CCcccHHH---HHHHHhCCCCce
Confidence            578999999 8999999999888899999999998777655 456765432   24 33223322   233322  2699


Q ss_pred             EEEeCCC
Q 024145           92 IMYNNAG   98 (272)
Q Consensus        92 ~lv~~ag   98 (272)
                      ++|.++|
T Consensus       260 ~vid~~g  266 (363)
T 3uog_A          260 HILEIAG  266 (363)
T ss_dssp             EEEEETT
T ss_pred             EEEECCC
Confidence            9999998

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=97.32  E-value=0.00036  Score=56.88  Aligned_cols=72  Identities=11%  Similarity=0.126  Sum_probs=56.4

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEE
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMY   94 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv   94 (272)
                      .+.++|.|+ |.+|+.+++.|.+.|+ |++++++++..+.+.    ..+.++..|.++++.++++      ...+.|.+|
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~----~~~~~i~gd~~~~~~l~~a------~i~~ad~vi   76 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR----SGANFVHGDPTRVSDLEKA------NVRGARAVI   76 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH----TTCEEEESCTTCHHHHHHT------TCTTCSEEE
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh----cCCeEEEcCCCCHHHHHhc------CcchhcEEE
Confidence            357889997 8999999999999999 999999887765554    3478899999998876543      123689888


Q ss_pred             eCCC
Q 024145           95 NNAG   98 (272)
Q Consensus        95 ~~ag   98 (272)
                      ...+
T Consensus        77 ~~~~   80 (234)
T 2aef_A           77 VDLE   80 (234)
T ss_dssp             ECCS
T ss_pred             EcCC
Confidence            8764

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=97.31  E-value=0.0032  Score=55.01  Aligned_cols=84  Identities=21%  Similarity=0.264  Sum_probs=58.6

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecC-----------CCHHHHHHHHH
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDI-----------SNEDEVINLVD   81 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----------~~~~~~~~~~~   81 (272)
                      +.+++++|.|+ |.+|..+++.+...|++|++.+|++.+.+.+.+ ++.+  ++..|+           ...+....-..
T Consensus       182 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~-lGa~--~~~l~~~~~~~~gya~~~~~~~~~~~~~  257 (381)
T 3p2y_A          182 VKPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS-VGAQ--WLDLGIDAAGEGGYARELSEAERAQQQQ  257 (381)
T ss_dssp             ECCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH-TTCE--ECCCC-------------CHHHHHHHHH
T ss_pred             cCCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCe--EEeccccccccccchhhhhHHHHhhhHH
Confidence            47789999998 899999999999999999999999888776654 5543  333221           01111223334


Q ss_pred             HHHHHhCCccEEEeCCCCC
Q 024145           82 TAVSKFGKLDIMYNNAGIL  100 (272)
Q Consensus        82 ~~~~~~g~id~lv~~ag~~  100 (272)
                      .+.+.....|++|..+...
T Consensus       258 ~l~e~l~~aDIVI~tv~iP  276 (381)
T 3p2y_A          258 ALEDAITKFDIVITTALVP  276 (381)
T ss_dssp             HHHHHHTTCSEEEECCCCT
T ss_pred             HHHHHHhcCCEEEECCCCC
Confidence            4555556899999987554

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=97.29  E-value=0.00011  Score=59.04  Aligned_cols=43  Identities=16%  Similarity=0.271  Sum_probs=37.2

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh
Q 024145           17 VAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL   59 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~   59 (272)
                      +++|+||+|.+|.++++.|++.|++|++.+|+++..+.+.+..
T Consensus         2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~   44 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEY   44 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHH
T ss_pred             eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh
Confidence            5889999999999999999999999999999887766665543

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=97.29  E-value=0.0021  Score=55.65  Aligned_cols=81  Identities=21%  Similarity=0.220  Sum_probs=53.6

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCC-HHHHHHHHHHHHH-HhCCcc
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISN-EDEVINLVDTAVS-KFGKLD   91 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~-~~g~id   91 (272)
                      .|+++||+|+ |++|...++.+...|++|+++++++++.+. .++++... +  .|..+ .+..+++.+.... ..+++|
T Consensus       168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~-~~~lGa~~-~--~~~~~~~~~~~~i~~~~~~~~g~g~D  242 (352)
T 1e3j_A          168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEV-AKNCGADV-T--LVVDPAKEEESSIIERIRSAIGDLPN  242 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHTTCSE-E--EECCTTTSCHHHHHHHHHHHSSSCCS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHH-HHHhCCCE-E--EcCcccccHHHHHHHHhccccCCCCC
Confidence            5789999997 999999998888899999999988776654 35666542 2  24332 2222222221110 013699


Q ss_pred             EEEeCCCC
Q 024145           92 IMYNNAGI   99 (272)
Q Consensus        92 ~lv~~ag~   99 (272)
                      ++|.++|.
T Consensus       243 ~vid~~g~  250 (352)
T 1e3j_A          243 VTIDCSGN  250 (352)
T ss_dssp             EEEECSCC
T ss_pred             EEEECCCC
Confidence            99999973

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=97.28  E-value=0.00064  Score=59.14  Aligned_cols=75  Identities=23%  Similarity=0.295  Sum_probs=55.5

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      .|+++||+|+ |++|...++.+...|++|+++++++++.+.+.++++....   .|..+.+.++       +..+++|++
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v---i~~~~~~~~~-------~~~~g~D~v  248 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDY---VIGSDQAKMS-------ELADSLDYV  248 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSCE---EETTCHHHHH-------HSTTTEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCcee---eccccHHHHH-------HhcCCCCEE
Confidence            6889999995 9999999988888899999999988877666556765322   2444543332       222479999


Q ss_pred             EeCCCC
Q 024145           94 YNNAGI   99 (272)
Q Consensus        94 v~~ag~   99 (272)
                      |.++|.
T Consensus       249 id~~g~  254 (357)
T 2cf5_A          249 IDTVPV  254 (357)
T ss_dssp             EECCCS
T ss_pred             EECCCC
Confidence            999984

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=97.27  E-value=0.0024  Score=55.41  Aligned_cols=78  Identities=22%  Similarity=0.373  Sum_probs=53.8

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHHHHHHHhCCceEEEEecCC--CHHHHHHHHHHHHHHh-CC
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGEDLADKLGQDVCYIHCDIS--NEDEVINLVDTAVSKF-GK   89 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~--~~~~~~~~~~~~~~~~-g~   89 (272)
                      .|+++||+|+ |++|...++.+...|+ +|+++++++++.+. .++++... +  .|..  +.+++.   +++.+.. ++
T Consensus       171 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~-a~~lGa~~-v--i~~~~~~~~~~~---~~i~~~~~~g  242 (356)
T 1pl8_A          171 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSK-AKEIGADL-V--LQISKESPQEIA---RKVEGQLGCK  242 (356)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHH-HHHTTCSE-E--EECSSCCHHHHH---HHHHHHHTSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH-HHHhCCCE-E--EcCcccccchHH---HHHHHHhCCC
Confidence            5789999996 9999999888888899 89999988776554 45666542 2  3443  233332   2333322 47


Q ss_pred             ccEEEeCCCC
Q 024145           90 LDIMYNNAGI   99 (272)
Q Consensus        90 id~lv~~ag~   99 (272)
                      +|++|.++|.
T Consensus       243 ~D~vid~~g~  252 (356)
T 1pl8_A          243 PEVTIECTGA  252 (356)
T ss_dssp             CSEEEECSCC
T ss_pred             CCEEEECCCC
Confidence            9999999973

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=97.25  E-value=0.0064  Score=51.01  Aligned_cols=42  Identities=12%  Similarity=0.090  Sum_probs=35.1

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHH
Q 024145           16 KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADK   58 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~   58 (272)
                      +++.|.|+ |.+|.+++..|++.|++|++.+|+++..+...+.
T Consensus         5 ~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~   46 (283)
T 4e12_A            5 TNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKR   46 (283)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHH
Confidence            56777775 8899999999999999999999998876655543

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=97.22  E-value=0.00038  Score=60.04  Aligned_cols=115  Identities=14%  Similarity=0.134  Sum_probs=68.2

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCC--e-----EEEeecCcc--hHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHH
Q 024145           16 KVAIITGGASGIGAMAVELFHENGA--K-----VVIADVQDK--LGEDLADKL---GQDVCYIHCDISNEDEVINLVDTA   83 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~--~-----V~~~~r~~~--~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~   83 (272)
                      .+++||||+|+||.+++..|+..|.  +     +++.+.++.  ..+....++   ...+. ......+  +.       
T Consensus         4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~-~~~~~~~--~~-------   73 (333)
T 5mdh_A            4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLL-KDVIATD--KE-------   73 (333)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTE-EEEEEES--CH-------
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhccc-CCEEEcC--Cc-------
Confidence            5799999999999999999998875  4     888888642  222222222   11111 1111111  11       


Q ss_pred             HHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCc-eEEEEecc
Q 024145           84 VSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKG-CILFTASA  151 (272)
Q Consensus        84 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g-~iv~iss~  151 (272)
                      .+.+.+.|++|+.||....+ +    .+   -.+.++.|+.....+.+.+..+-   ..+ +++.+|-.
T Consensus        74 ~~~~~daDvVvitAg~prkp-G----~t---R~dll~~N~~i~~~i~~~i~~~~---~~~~~vivvsNP  131 (333)
T 5mdh_A           74 EIAFKDLDVAILVGSMPRRD-G----ME---RKDLLKANVKIFKCQGAALDKYA---KKSVKVIVVGNP  131 (333)
T ss_dssp             HHHTTTCSEEEECCSCCCCT-T----CC---TTTTHHHHHHHHHHHHHHHHHHS---CTTCEEEECSSS
T ss_pred             HHHhCCCCEEEEeCCCCCCC-C----CC---HHHHHHHHHHHHHHHHHHHHHhC---CCCeEEEEcCCc
Confidence            12233789999999865331 2    11   22346778777777776665542   345 57777654

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=97.21  E-value=0.00094  Score=58.12  Aligned_cols=81  Identities=17%  Similarity=0.113  Sum_probs=52.4

Q ss_pred             CC-cEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcch---HHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHH---
Q 024145           14 EG-KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKL---GEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSK---   86 (272)
Q Consensus        14 ~~-k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~---~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~---   86 (272)
                      .| +++||+||+|++|...++.+...|++|+++.++.+.   ..+..++++.... +  |-.+. .-+.+.+++.+.   
T Consensus       166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~v-i--~~~~~-~~~~~~~~i~~~t~~  241 (364)
T 1gu7_A          166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQV-I--TEDQN-NSREFGPTIKEWIKQ  241 (364)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEE-E--EHHHH-HCGGGHHHHHHHHHH
T ss_pred             CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCeEE-E--ecCcc-chHHHHHHHHHHhhc
Confidence            57 899999999999999888877789999988876654   1234466775422 2  21110 001122333332   


Q ss_pred             -hCCccEEEeCCC
Q 024145           87 -FGKLDIMYNNAG   98 (272)
Q Consensus        87 -~g~id~lv~~ag   98 (272)
                       .+++|++|.+.|
T Consensus       242 ~~~g~Dvvid~~G  254 (364)
T 1gu7_A          242 SGGEAKLALNCVG  254 (364)
T ss_dssp             HTCCEEEEEESSC
T ss_pred             cCCCceEEEECCC
Confidence             246999999997

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.20  E-value=0.0015  Score=57.14  Aligned_cols=74  Identities=28%  Similarity=0.415  Sum_probs=54.7

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      .|.++||+|+ |++|...++.+...|++|+++++++++.+.+ ++++...   ..|..+.+.+++    +.   +++|++
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a-~~lGa~~---vi~~~~~~~~~~----~~---~g~Dvv  261 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAA-KALGADE---VVNSRNADEMAA----HL---KSFDFI  261 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHH-HHHTCSE---EEETTCHHHHHT----TT---TCEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCCcE---EeccccHHHHHH----hh---cCCCEE
Confidence            5789999998 8999999988888899999999988876654 4566532   235555543322    21   479999


Q ss_pred             EeCCCC
Q 024145           94 YNNAGI   99 (272)
Q Consensus        94 v~~ag~   99 (272)
                      |.++|.
T Consensus       262 id~~g~  267 (369)
T 1uuf_A          262 LNTVAA  267 (369)
T ss_dssp             EECCSS
T ss_pred             EECCCC
Confidence            999984

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=97.19  E-value=0.0012  Score=57.78  Aligned_cols=79  Identities=18%  Similarity=0.328  Sum_probs=54.3

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHHHHHHHhCCceEEEEecCCC-HHHHHHHHHHHHHHhCCcc
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGEDLADKLGQDVCYIHCDISN-EDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~id   91 (272)
                      .|+++||+|+ |++|...++.+...|+ +|+++++++++.+.+ ++++... +  +|..+ .+++.+.+.++..  +++|
T Consensus       192 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~-~~lGa~~-v--i~~~~~~~~~~~~~~~~~~--~g~D  264 (374)
T 1cdo_A          192 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKA-KVFGATD-F--VNPNDHSEPISQVLSKMTN--GGVD  264 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HHTTCCE-E--ECGGGCSSCHHHHHHHHHT--SCBS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH-HHhCCce-E--EeccccchhHHHHHHHHhC--CCCC
Confidence            5789999995 9999999988888999 799999888776644 5666532 2  34332 1223333333222  4799


Q ss_pred             EEEeCCCC
Q 024145           92 IMYNNAGI   99 (272)
Q Consensus        92 ~lv~~ag~   99 (272)
                      ++|.++|.
T Consensus       265 ~vid~~g~  272 (374)
T 1cdo_A          265 FSLECVGN  272 (374)
T ss_dssp             EEEECSCC
T ss_pred             EEEECCCC
Confidence            99999973

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=97.16  E-value=0.0015  Score=56.77  Aligned_cols=77  Identities=25%  Similarity=0.369  Sum_probs=54.1

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHc-CCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhC-Ccc
Q 024145           14 EGKVAIITGGASGIGAMAVELFHEN-GAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFG-KLD   91 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g-~id   91 (272)
                      .|+++||+|+ |++|...++.+... |++|+++++++++.+.+ ++++....   .|..+.  +.+.+.++.  .+ ++|
T Consensus       186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~-~~lGa~~v---i~~~~~--~~~~v~~~~--~g~g~D  256 (359)
T 1h2b_A          186 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLA-ERLGADHV---VDARRD--PVKQVMELT--RGRGVN  256 (359)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHH-HHTTCSEE---EETTSC--HHHHHHHHT--TTCCEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHhCCCEE---Eeccch--HHHHHHHHh--CCCCCc
Confidence            6789999999 89999998888888 99999999987766544 56765322   344443  222222221  13 699


Q ss_pred             EEEeCCCC
Q 024145           92 IMYNNAGI   99 (272)
Q Consensus        92 ~lv~~ag~   99 (272)
                      ++|.++|.
T Consensus       257 vvid~~G~  264 (359)
T 1h2b_A          257 VAMDFVGS  264 (359)
T ss_dssp             EEEESSCC
T ss_pred             EEEECCCC
Confidence            99999983

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=97.16  E-value=0.00051  Score=59.37  Aligned_cols=77  Identities=21%  Similarity=0.301  Sum_probs=52.6

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDI   92 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   92 (272)
                      .|+++||+|+ |++|...++.+...|+ +|+++++++++.+.+. ++ ..   ...|..+. ++.+.+.++.  ..++|+
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~-~l-a~---~v~~~~~~-~~~~~~~~~~--~~g~D~  234 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFAR-PY-AD---RLVNPLEE-DLLEVVRRVT--GSGVEV  234 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGT-TT-CS---EEECTTTS-CHHHHHHHHH--SSCEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh-HH---hccCcCcc-CHHHHHHHhc--CCCCCE
Confidence            7889999999 9999999998888999 8999998876654332 22 21   12354442 2322233322  236999


Q ss_pred             EEeCCCC
Q 024145           93 MYNNAGI   99 (272)
Q Consensus        93 lv~~ag~   99 (272)
                      +|.++|.
T Consensus       235 vid~~g~  241 (343)
T 2dq4_A          235 LLEFSGN  241 (343)
T ss_dssp             EEECSCC
T ss_pred             EEECCCC
Confidence            9999983

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=97.15  E-value=0.00068  Score=58.72  Aligned_cols=69  Identities=23%  Similarity=0.362  Sum_probs=52.7

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      .|+++||+|+ |++|...++.+...|++|+++++++++.+. .++++....+     .+.+.+++          ++|++
T Consensus       176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~-~~~lGa~~v~-----~~~~~~~~----------~~D~v  238 (348)
T 3two_A          176 KGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQD-ALSMGVKHFY-----TDPKQCKE----------ELDFI  238 (348)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHH-HHHTTCSEEE-----SSGGGCCS----------CEEEE
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHH-HHhcCCCeec-----CCHHHHhc----------CCCEE
Confidence            6889999997 999999998888899999999998887764 4557755433     33332211          69999


Q ss_pred             EeCCCC
Q 024145           94 YNNAGI   99 (272)
Q Consensus        94 v~~ag~   99 (272)
                      |.+.|.
T Consensus       239 id~~g~  244 (348)
T 3two_A          239 ISTIPT  244 (348)
T ss_dssp             EECCCS
T ss_pred             EECCCc
Confidence            999984

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=97.13  E-value=0.001  Score=57.81  Aligned_cols=74  Identities=26%  Similarity=0.289  Sum_probs=53.4

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCH-HHHHHHHHHHHHHhCCccE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNE-DEVINLVDTAVSKFGKLDI   92 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g~id~   92 (272)
                      .|+++||+|+ |++|...++.+...|++|+++++++++.+.+ ++++....   .|..+. +.    .+++.   +++|+
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~-~~lGa~~v---~~~~~~~~~----~~~~~---~~~D~  246 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDA-MKMGADHY---IATLEEGDW----GEKYF---DTFDL  246 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHH-HHHTCSEE---EEGGGTSCH----HHHSC---SCEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH-HHcCCCEE---EcCcCchHH----HHHhh---cCCCE
Confidence            6789999999 9999999988888899999999988876644 45665422   233222 11    12221   47999


Q ss_pred             EEeCCCC
Q 024145           93 MYNNAGI   99 (272)
Q Consensus        93 lv~~ag~   99 (272)
                      +|.++|.
T Consensus       247 vid~~g~  253 (360)
T 1piw_A          247 IVVCASS  253 (360)
T ss_dssp             EEECCSC
T ss_pred             EEECCCC
Confidence            9999985

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=97.13  E-value=0.0012  Score=57.62  Aligned_cols=76  Identities=20%  Similarity=0.341  Sum_probs=52.9

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHH-cCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHh-CCcc
Q 024145           14 EGKVAIITGGASGIGAMAVELFHE-NGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKF-GKLD   91 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~id   91 (272)
                      .|+++||+||+|++|...++.+.. .|++|+++++++++.+.+ ++++....   .|-.+  ++   .+++.+.. +++|
T Consensus       171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~-~~lGad~v---i~~~~--~~---~~~v~~~~~~g~D  241 (363)
T 4dvj_A          171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWV-KSLGAHHV---IDHSK--PL---AAEVAALGLGAPA  241 (363)
T ss_dssp             SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHH-HHTTCSEE---ECTTS--CH---HHHHHTTCSCCEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHH-HHcCCCEE---EeCCC--CH---HHHHHHhcCCCce
Confidence            578999999999999987776655 589999999987766544 55765422   24333  22   23333322 4799


Q ss_pred             EEEeCCC
Q 024145           92 IMYNNAG   98 (272)
Q Consensus        92 ~lv~~ag   98 (272)
                      ++|.++|
T Consensus       242 vvid~~g  248 (363)
T 4dvj_A          242 FVFSTTH  248 (363)
T ss_dssp             EEEECSC
T ss_pred             EEEECCC
Confidence            9999987

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=97.12  E-value=0.0013  Score=57.41  Aligned_cols=79  Identities=14%  Similarity=0.301  Sum_probs=54.0

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHHHHHHHhCCceEEEEecCCC-HHHHHHHHHHHHHHhCCcc
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGEDLADKLGQDVCYIHCDISN-EDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~id   91 (272)
                      .|+++||+|+ |++|...++.+...|+ +|+++++++++.+.+ ++++... +  +|..+ .+++.+.+.++..  +++|
T Consensus       191 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~-~~lGa~~-v--i~~~~~~~~~~~~~~~~~~--~g~D  263 (374)
T 2jhf_A          191 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKA-KEVGATE-C--VNPQDYKKPIQEVLTEMSN--GGVD  263 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HHTTCSE-E--ECGGGCSSCHHHHHHHHTT--SCBS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHhCCce-E--ecccccchhHHHHHHHHhC--CCCc
Confidence            5789999995 9999999998888999 799999888776544 5666532 2  34332 1223322332221  4799


Q ss_pred             EEEeCCCC
Q 024145           92 IMYNNAGI   99 (272)
Q Consensus        92 ~lv~~ag~   99 (272)
                      ++|.++|.
T Consensus       264 ~vid~~g~  271 (374)
T 2jhf_A          264 FSFEVIGR  271 (374)
T ss_dssp             EEEECSCC
T ss_pred             EEEECCCC
Confidence            99999983

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=97.11  E-value=0.0047  Score=52.98  Aligned_cols=116  Identities=16%  Similarity=0.106  Sum_probs=65.2

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCC--eEEEeecCcchHHHHHHHhC------CceEEEEecCCCHHHHHHHHH
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGA--KVVIADVQDKLGEDLADKLG------QDVCYIHCDISNEDEVINLVD   81 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~   81 (272)
                      .++.+++++.|+|+ |++|.+++..|+..|.  ++++.+++++..+....++.      ..+.... |  +.        
T Consensus         4 ~~~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~-~--~~--------   71 (326)
T 3vku_A            4 ITDKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYS-A--EY--------   71 (326)
T ss_dssp             ---CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C--CG--------
T ss_pred             cccCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEE-C--cH--------
Confidence            45667789999996 9999999999999987  89999998776654333331      1222222 2  11        


Q ss_pred             HHHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecc
Q 024145           82 TAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASA  151 (272)
Q Consensus        82 ~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~  151 (272)
                         +.+.+.|++|..+|....+ +       +.-.+.++.|..-...+.+.+..+   .+.+.++.+|-.
T Consensus        72 ---~a~~~aDiVvi~ag~~~kp-G-------~tR~dL~~~N~~I~~~i~~~i~~~---~p~a~ilvvtNP  127 (326)
T 3vku_A           72 ---SDAKDADLVVITAGAPQKP-G-------ETRLDLVNKNLKILKSIVDPIVDS---GFNGIFLVAANP  127 (326)
T ss_dssp             ---GGGTTCSEEEECCCCC------------------------CHHHHHHHHHTT---TCCSEEEECSSS
T ss_pred             ---HHhcCCCEEEECCCCCCCC-C-------chHHHHHHHHHHHHHHHHHHHHhc---CCceEEEEccCc
Confidence               2234789999999964321 1       112344566665555555544432   356777777654

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=97.10  E-value=0.00086  Score=57.38  Aligned_cols=73  Identities=23%  Similarity=0.464  Sum_probs=52.5

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      .|+++||+||+|++|...++.+...|++|+.+.++.+  .++.++++... +  .|..+.+.+.+       ...++|++
T Consensus       152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~~--~~~~~~lGa~~-~--i~~~~~~~~~~-------~~~g~D~v  219 (321)
T 3tqh_A          152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKRN--HAFLKALGAEQ-C--INYHEEDFLLA-------ISTPVDAV  219 (321)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHHH--HHHHHHHTCSE-E--EETTTSCHHHH-------CCSCEEEE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccch--HHHHHHcCCCE-E--EeCCCcchhhh-------hccCCCEE
Confidence            6789999999999999999999889999998875443  45566677542 2  34443332211       12479999


Q ss_pred             EeCCC
Q 024145           94 YNNAG   98 (272)
Q Consensus        94 v~~ag   98 (272)
                      |.+.|
T Consensus       220 ~d~~g  224 (321)
T 3tqh_A          220 IDLVG  224 (321)
T ss_dssp             EESSC
T ss_pred             EECCC
Confidence            99987

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=97.09  E-value=0.0018  Score=56.68  Aligned_cols=79  Identities=19%  Similarity=0.304  Sum_probs=53.8

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHHHHHHHhCCceEEEEecCCC-HHHHHHHHHHHHHHhCCcc
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGEDLADKLGQDVCYIHCDISN-EDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~id   91 (272)
                      .|+++||+|+ |++|...++.+...|+ +|+++++++++.+.+ ++++....   +|..+ .+++.+.+.++.  .+.+|
T Consensus       195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~~lGa~~v---i~~~~~~~~~~~~v~~~~--~~g~D  267 (376)
T 1e3i_A          195 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKA-KALGATDC---LNPRELDKPVQDVITELT--AGGVD  267 (376)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HHTTCSEE---ECGGGCSSCHHHHHHHHH--TSCBS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHhCCcEE---EccccccchHHHHHHHHh--CCCcc
Confidence            5789999996 9999999988888899 799999888776544 56665322   24332 122322232222  14799


Q ss_pred             EEEeCCCC
Q 024145           92 IMYNNAGI   99 (272)
Q Consensus        92 ~lv~~ag~   99 (272)
                      ++|.++|.
T Consensus       268 vvid~~G~  275 (376)
T 1e3i_A          268 YSLDCAGT  275 (376)
T ss_dssp             EEEESSCC
T ss_pred             EEEECCCC
Confidence            99999983

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=97.08  E-value=0.0029  Score=55.40  Aligned_cols=78  Identities=18%  Similarity=0.260  Sum_probs=55.0

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcC-CeEEEeecCcchHHHHHHHhCCceEEEEecCC--CHHHHHHHHHHHHHHhC--
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENG-AKVVIADVQDKLGEDLADKLGQDVCYIHCDIS--NEDEVINLVDTAVSKFG--   88 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~--~~~~~~~~~~~~~~~~g--   88 (272)
                      .|+++||+| +|++|...++.+...| ++|+++++++++.+.+ ++++... +  .|..  +.+++.   +++.+..+  
T Consensus       195 ~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~-~~lGa~~-v--i~~~~~~~~~~~---~~v~~~~~g~  266 (380)
T 1vj0_A          195 AGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLA-EEIGADL-T--LNRRETSVEERR---KAIMDITHGR  266 (380)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH-HHTTCSE-E--EETTTSCHHHHH---HHHHHHTTTS
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHH-HHcCCcE-E--EeccccCcchHH---HHHHHHhCCC
Confidence            578999999 8999999998888889 5999999988766544 4666532 2  2333  234433   33444332  


Q ss_pred             CccEEEeCCCC
Q 024145           89 KLDIMYNNAGI   99 (272)
Q Consensus        89 ~id~lv~~ag~   99 (272)
                      ++|++|.++|.
T Consensus       267 g~Dvvid~~g~  277 (380)
T 1vj0_A          267 GADFILEATGD  277 (380)
T ss_dssp             CEEEEEECSSC
T ss_pred             CCcEEEECCCC
Confidence            59999999984

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=97.08  E-value=0.0014  Score=57.51  Aligned_cols=80  Identities=23%  Similarity=0.343  Sum_probs=54.8

Q ss_pred             CCcEEEEeC-CCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Q 024145           14 EGKVAIITG-GASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDI   92 (272)
Q Consensus        14 ~~k~vlItG-as~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   92 (272)
                      .|.++||.| |+|++|...++.+...|++|+++++++++.+.+ ++++....   .|-.+.+-.+++.+....  .++|+
T Consensus       170 ~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~-~~lGa~~~---~~~~~~~~~~~v~~~t~~--~g~d~  243 (379)
T 3iup_A          170 EGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLL-KAQGAVHV---CNAASPTFMQDLTEALVS--TGATI  243 (379)
T ss_dssp             TTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHH-HHTTCSCE---EETTSTTHHHHHHHHHHH--HCCCE
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-HhCCCcEE---EeCCChHHHHHHHHHhcC--CCceE
Confidence            577899987 999999999988888899999999887766544 45765422   233333322222222211  26999


Q ss_pred             EEeCCCC
Q 024145           93 MYNNAGI   99 (272)
Q Consensus        93 lv~~ag~   99 (272)
                      +|.+.|.
T Consensus       244 v~d~~g~  250 (379)
T 3iup_A          244 AFDATGG  250 (379)
T ss_dssp             EEESCEE
T ss_pred             EEECCCc
Confidence            9999985

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=97.03  E-value=0.001  Score=58.17  Aligned_cols=77  Identities=30%  Similarity=0.456  Sum_probs=53.9

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHH---H-hC
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVS---K-FG   88 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~---~-~g   88 (272)
                      .|+++||+|+ |++|...++.+...|+ +|+++++++++.+ +.++++....   .|..+.+.    .+.+.+   . .+
T Consensus       182 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~-~a~~lGa~~v---i~~~~~~~----~~~i~~~~~~~~g  252 (370)
T 4ej6_A          182 AGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRR-LAEEVGATAT---VDPSAGDV----VEAIAGPVGLVPG  252 (370)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHH-HHHHHTCSEE---ECTTSSCH----HHHHHSTTSSSTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH-HHHHcCCCEE---ECCCCcCH----HHHHHhhhhccCC
Confidence            5789999998 9999999888888999 7888888877654 5566765422   34444322    223332   1 24


Q ss_pred             CccEEEeCCCC
Q 024145           89 KLDIMYNNAGI   99 (272)
Q Consensus        89 ~id~lv~~ag~   99 (272)
                      ++|++|.++|.
T Consensus       253 g~Dvvid~~G~  263 (370)
T 4ej6_A          253 GVDVVIECAGV  263 (370)
T ss_dssp             CEEEEEECSCC
T ss_pred             CCCEEEECCCC
Confidence            79999999873

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=97.03  E-value=0.0016  Score=56.82  Aligned_cols=79  Identities=16%  Similarity=0.319  Sum_probs=53.6

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHHHHHHHhCCceEEEEecCCC-HHHHHHHHHHHHHHhCCcc
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGEDLADKLGQDVCYIHCDISN-EDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~id   91 (272)
                      .|+++||+|+ |++|...++.+...|+ +|+++++++++.+.+ ++++....   .|..+ .+++.+.+.++..  +++|
T Consensus       190 ~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~-~~lGa~~v---i~~~~~~~~~~~~v~~~~~--~g~D  262 (373)
T 2fzw_A          190 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARA-KEFGATEC---INPQDFSKPIQEVLIEMTD--GGVD  262 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHH-HHHTCSEE---ECGGGCSSCHHHHHHHHTT--SCBS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHcCCceE---eccccccccHHHHHHHHhC--CCCC
Confidence            5789999996 9999999988888899 799999888776544 46665322   23332 1223222322211  4799


Q ss_pred             EEEeCCCC
Q 024145           92 IMYNNAGI   99 (272)
Q Consensus        92 ~lv~~ag~   99 (272)
                      ++|.++|.
T Consensus       263 ~vid~~g~  270 (373)
T 2fzw_A          263 YSFECIGN  270 (373)
T ss_dssp             EEEECSCC
T ss_pred             EEEECCCc
Confidence            99999973

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=97.03  E-value=0.0019  Score=57.13  Aligned_cols=77  Identities=29%  Similarity=0.503  Sum_probs=54.5

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHh-C-Cc
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKF-G-KL   90 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g-~i   90 (272)
                      .|.++||+|+ |++|...++.+...|+ +|+++++++++.+ +.++++....   .|-.+.+.    .+++.+.. + ++
T Consensus       213 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~-~~~~lGa~~v---i~~~~~~~----~~~i~~~t~g~g~  283 (404)
T 3ip1_A          213 PGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRN-LAKELGADHV---IDPTKENF----VEAVLDYTNGLGA  283 (404)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHH-HHHHHTCSEE---ECTTTSCH----HHHHHHHTTTCCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH-HHHHcCCCEE---EcCCCCCH----HHHHHHHhCCCCC
Confidence            6789999998 9999998888888899 8999988877655 4466765422   24433322    23333333 2 59


Q ss_pred             cEEEeCCCC
Q 024145           91 DIMYNNAGI   99 (272)
Q Consensus        91 d~lv~~ag~   99 (272)
                      |++|.++|.
T Consensus       284 D~vid~~g~  292 (404)
T 3ip1_A          284 KLFLEATGV  292 (404)
T ss_dssp             SEEEECSSC
T ss_pred             CEEEECCCC
Confidence            999999984

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=97.02  E-value=0.00036  Score=58.56  Aligned_cols=72  Identities=17%  Similarity=0.299  Sum_probs=52.6

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   91 (272)
                      ++++++++|.|+ |++|++++..|++.|++|++.+|+.++.+++.+..+  +..  .+  +.   ++++       ...|
T Consensus       126 ~~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~g--~~~--~~--~~---~~~~-------~~aD  188 (275)
T 2hk9_A          126 EVKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFP--LEV--VN--SP---EEVI-------DKVQ  188 (275)
T ss_dssp             TGGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTSC--EEE--CS--CG---GGTG-------GGCS
T ss_pred             CcCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHcC--Cee--eh--hH---Hhhh-------cCCC
Confidence            567899999996 799999999999999999999999877766655443  211  11  11   1111       2589


Q ss_pred             EEEeCCCCC
Q 024145           92 IMYNNAGIL  100 (272)
Q Consensus        92 ~lv~~ag~~  100 (272)
                      ++|++....
T Consensus       189 iVi~atp~~  197 (275)
T 2hk9_A          189 VIVNTTSVG  197 (275)
T ss_dssp             EEEECSSTT
T ss_pred             EEEEeCCCC
Confidence            999998753

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=97.01  E-value=0.0041  Score=54.78  Aligned_cols=84  Identities=24%  Similarity=0.281  Sum_probs=56.2

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecC----------------CCHHHH
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDI----------------SNEDEV   76 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~----------------~~~~~~   76 (272)
                      +.+.+++|.|+ |.+|..+++.+...|++|++.++++.+.+.+.+ .+.+  ++..++                ++.. .
T Consensus       188 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~-~G~~--~~~~~~~~~~d~~~~~~ya~e~s~~~-~  262 (405)
T 4dio_A          188 VPAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVAS-LGAK--FIAVEDEEFKAAETAGGYAKEMSGEY-Q  262 (405)
T ss_dssp             ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHH-TTCE--ECCCCC-----------------CHH-H
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-cCCc--eeecccccccccccccchhhhcchhh-h
Confidence            46789999998 899999999999999999999999887766544 5543  333322                2211 0


Q ss_pred             HHHHHHHHHHhCCccEEEeCCCCCC
Q 024145           77 INLVDTAVSKFGKLDIMYNNAGILD  101 (272)
Q Consensus        77 ~~~~~~~~~~~g~id~lv~~ag~~~  101 (272)
                      +.-...+.+.....|++|.++....
T Consensus       263 ~~~~~~l~e~l~~aDVVI~tvlipg  287 (405)
T 4dio_A          263 VKQAALVAEHIAKQDIVITTALIPG  287 (405)
T ss_dssp             HHHHHHHHHHHHTCSEEEECCCCSS
T ss_pred             hhhHhHHHHHhcCCCEEEECCcCCC
Confidence            1111223333347899999886543

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=97.00  E-value=0.01  Score=50.84  Aligned_cols=113  Identities=15%  Similarity=0.065  Sum_probs=72.2

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC--eEEEeecCcchHHHHHHHh----C---CceEEEEecCCCHHHHHHHHHHHH
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGA--KVVIADVQDKLGEDLADKL----G---QDVCYIHCDISNEDEVINLVDTAV   84 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~----~---~~~~~~~~D~~~~~~~~~~~~~~~   84 (272)
                      +.+++.|+|+ |.+|.+++..|++.|.  +|++.++++++.+....++    +   ..+....-|   .           
T Consensus         4 ~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~---~-----------   68 (326)
T 3pqe_A            4 HVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT---Y-----------   68 (326)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC---G-----------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc---H-----------
Confidence            3468999996 9999999999999996  8999999877655432222    1   233333222   1           


Q ss_pred             HHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccc
Q 024145           85 SKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASAC  152 (272)
Q Consensus        85 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~  152 (272)
                      +.+...|++|..+|....+     ..+.   .+.++.|..-...+.+.+..+   .+.+.++.+|-..
T Consensus        69 ~a~~~aDvVvi~ag~p~kp-----G~~R---~dL~~~N~~Iv~~i~~~I~~~---~p~a~vlvvtNPv  125 (326)
T 3pqe_A           69 EDCKDADIVCICAGANQKP-----GETR---LELVEKNLKIFKGIVSEVMAS---GFDGIFLVATNPV  125 (326)
T ss_dssp             GGGTTCSEEEECCSCCCCT-----TCCH---HHHHHHHHHHHHHHHHHHHHT---TCCSEEEECSSSH
T ss_pred             HHhCCCCEEEEecccCCCC-----CccH---HHHHHHHHHHHHHHHHHHHHh---cCCeEEEEcCChH
Confidence            1233789999999964321     1222   234677776666666665553   2467777776543

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=96.99  E-value=0.0014  Score=57.31  Aligned_cols=78  Identities=22%  Similarity=0.293  Sum_probs=54.2

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHHHHHHHhCCceEEEEecCCC-HHHHHHHHHHHHHHh-CCc
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGEDLADKLGQDVCYIHCDISN-EDEVINLVDTAVSKF-GKL   90 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~-g~i   90 (272)
                      .|.++||+|+ |++|...++.+...|+ +|+++++++++.+ +.++++....   .|..+ .+++.+   .+.+.. +++
T Consensus       193 ~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~-~a~~lGa~~v---i~~~~~~~~~~~---~i~~~~~gg~  264 (378)
T 3uko_A          193 PGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYE-TAKKFGVNEF---VNPKDHDKPIQE---VIVDLTDGGV  264 (378)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHH-HHHTTTCCEE---ECGGGCSSCHHH---HHHHHTTSCB
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHH-HHHHcCCcEE---EccccCchhHHH---HHHHhcCCCC
Confidence            5789999998 9999999888888899 7999998888766 4566665332   23321 122222   233322 479


Q ss_pred             cEEEeCCCC
Q 024145           91 DIMYNNAGI   99 (272)
Q Consensus        91 d~lv~~ag~   99 (272)
                      |++|.++|.
T Consensus       265 D~vid~~g~  273 (378)
T 3uko_A          265 DYSFECIGN  273 (378)
T ss_dssp             SEEEECSCC
T ss_pred             CEEEECCCC
Confidence            999999983

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=96.98  E-value=0.00074  Score=56.78  Aligned_cols=70  Identities=14%  Similarity=0.286  Sum_probs=52.4

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGK   89 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (272)
                      .++++|+++|+|+ ||.|++++..|++.|+ +|+++.|+.++.+++.+.+    ..+.     .+++       .+ . .
T Consensus       118 ~~~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~~----~~~~-----~~~l-------~~-l-~  178 (282)
T 3fbt_A          118 VEIKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGEF----KVIS-----YDEL-------SN-L-K  178 (282)
T ss_dssp             CCCTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTTS----EEEE-----HHHH-------TT-C-C
T ss_pred             CCccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhc----Cccc-----HHHH-------Hh-c-c
Confidence            3468999999997 7999999999999998 8999999988776665433    2221     1222       12 3 6


Q ss_pred             ccEEEeCCCC
Q 024145           90 LDIMYNNAGI   99 (272)
Q Consensus        90 id~lv~~ag~   99 (272)
                      .|+|||+...
T Consensus       179 ~DivInaTp~  188 (282)
T 3fbt_A          179 GDVIINCTPK  188 (282)
T ss_dssp             CSEEEECSST
T ss_pred             CCEEEECCcc
Confidence            8999998864

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=96.97  E-value=0.00037  Score=57.75  Aligned_cols=70  Identities=11%  Similarity=0.242  Sum_probs=49.7

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      +++| +++|.|+ ||.|++++..|++.|+ +|++++|+.++.+++.+++    .....     +++.+.+.       ..
T Consensus       106 ~~~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~----~~~~~-----~~~~~~~~-------~a  167 (253)
T 3u62_A          106 EVKE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPV----KIFSL-----DQLDEVVK-------KA  167 (253)
T ss_dssp             CCCS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSC----EEEEG-----GGHHHHHH-------TC
T ss_pred             CCCC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHc----ccCCH-----HHHHhhhc-------CC
Confidence            4577 8999996 8999999999999998 8999999987765544332    22221     22222222       68


Q ss_pred             cEEEeCCCC
Q 024145           91 DIMYNNAGI   99 (272)
Q Consensus        91 d~lv~~ag~   99 (272)
                      |+||++...
T Consensus       168 DiVInatp~  176 (253)
T 3u62_A          168 KSLFNTTSV  176 (253)
T ss_dssp             SEEEECSST
T ss_pred             CEEEECCCC
Confidence            999998754

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=96.97  E-value=0.0047  Score=53.24  Aligned_cols=77  Identities=16%  Similarity=0.239  Sum_probs=53.0

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHc--CCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Q 024145           14 EGKVAIITGGASGIGAMAVELFHEN--GAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   91 (272)
                      .|+++||+|+ |++|...++.+...  |++|+++++++++.+.+ ++++....   .|..+.+   ..+.++.+ ..++|
T Consensus       170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~-~~lGa~~v---i~~~~~~---~~~~~~~~-g~g~D  240 (344)
T 2h6e_A          170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFA-LELGADYV---SEMKDAE---SLINKLTD-GLGAS  240 (344)
T ss_dssp             SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHH-HHHTCSEE---ECHHHHH---HHHHHHHT-TCCEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHH-HHhCCCEE---eccccch---HHHHHhhc-CCCcc
Confidence            6899999999 99999999888888  99999999887766544 45664321   2322201   12233322 12699


Q ss_pred             EEEeCCCC
Q 024145           92 IMYNNAGI   99 (272)
Q Consensus        92 ~lv~~ag~   99 (272)
                      ++|.++|.
T Consensus       241 ~vid~~g~  248 (344)
T 2h6e_A          241 IAIDLVGT  248 (344)
T ss_dssp             EEEESSCC
T ss_pred             EEEECCCC
Confidence            99999973

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=96.96  E-value=0.0056  Score=51.63  Aligned_cols=87  Identities=13%  Similarity=0.261  Sum_probs=58.1

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCc------------------chHHHHHH---HhCC--ceEE
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQD------------------KLGEDLAD---KLGQ--DVCY   65 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~------------------~~~~~~~~---~~~~--~~~~   65 (272)
                      ..++++++|+|.|+ ||+|..+++.|+..|. ++.+++.+.                  .+.+.+.+   +++.  ++..
T Consensus        31 q~kL~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~  109 (292)
T 3h8v_A           31 YEKIRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEV  109 (292)
T ss_dssp             -CGGGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEE
T ss_pred             HHHHhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEE
Confidence            45678889999985 7999999999999996 688888765                  33333332   3333  4556


Q ss_pred             EEecCCCHHHHHHHHHHHHHH----hCCccEEEeCC
Q 024145           66 IHCDISNEDEVINLVDTAVSK----FGKLDIMYNNA   97 (272)
Q Consensus        66 ~~~D~~~~~~~~~~~~~~~~~----~g~id~lv~~a   97 (272)
                      +..++++.+.++.+++.+...    ....|+||.+.
T Consensus       110 ~~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~  145 (292)
T 3h8v_A          110 HNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCV  145 (292)
T ss_dssp             ECCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECC
T ss_pred             ecccCCcHHHHHHHhhhhcccccccCCCCCEEEECC
Confidence            666777766666665543221    13678888665

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=96.93  E-value=0.00093  Score=57.15  Aligned_cols=73  Identities=21%  Similarity=0.331  Sum_probs=51.0

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEE
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMY   94 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv   94 (272)
                      |+ +||+||+|++|...++.+...|++|+++++++++.+.+ ++++....+-.-|...   +    .++  ..+++|++|
T Consensus       148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~-~~lGa~~vi~~~~~~~---~----~~~--~~~~~d~v~  216 (324)
T 3nx4_A          148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYL-KSLGANRILSRDEFAE---S----RPL--EKQLWAGAI  216 (324)
T ss_dssp             CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH-HHHTCSEEEEGGGSSC---C----CSS--CCCCEEEEE
T ss_pred             Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HhcCCCEEEecCCHHH---H----Hhh--cCCCccEEE
Confidence            45 99999999999999998888999999999988776544 5576543332222211   1    111  114689999


Q ss_pred             eCCC
Q 024145           95 NNAG   98 (272)
Q Consensus        95 ~~ag   98 (272)
                      .+.|
T Consensus       217 d~~g  220 (324)
T 3nx4_A          217 DTVG  220 (324)
T ss_dssp             ESSC
T ss_pred             ECCC
Confidence            8876

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=96.89  E-value=0.0026  Score=53.95  Aligned_cols=73  Identities=19%  Similarity=0.255  Sum_probs=52.3

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      .++.||+++|.|+ |+||+++++.|...|++|++.+|+.+..+.+.+ .+.  ..+..     ++++++       ....
T Consensus       153 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~-~g~--~~~~~-----~~l~~~-------l~~a  216 (300)
T 2rir_A          153 YTIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLARITE-MGL--VPFHT-----DELKEH-------VKDI  216 (300)
T ss_dssp             SCSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TTC--EEEEG-----GGHHHH-------STTC
T ss_pred             CCCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-CCC--eEEch-----hhHHHH-------hhCC
Confidence            4689999999996 999999999999999999999998766544332 332  22211     222222       2368


Q ss_pred             cEEEeCCCC
Q 024145           91 DIMYNNAGI   99 (272)
Q Consensus        91 d~lv~~ag~   99 (272)
                      |+++++...
T Consensus       217 DvVi~~~p~  225 (300)
T 2rir_A          217 DICINTIPS  225 (300)
T ss_dssp             SEEEECCSS
T ss_pred             CEEEECCCh
Confidence            999998863

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=96.86  E-value=0.0027  Score=55.48  Aligned_cols=79  Identities=16%  Similarity=0.226  Sum_probs=52.8

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHHHHHHHhCCceEEEEecCCC-HHHHHHHHHHHHHHhCCcc
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGEDLADKLGQDVCYIHCDISN-EDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~id   91 (272)
                      .|+++||+|+ |++|...++.+...|+ +|+++++++++.+.+ ++++... +  .|..+ .+++.+.+.++.  .+++|
T Consensus       191 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~~lGa~~-v--i~~~~~~~~~~~~i~~~t--~gg~D  263 (373)
T 1p0f_A          191 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKA-IELGATE-C--LNPKDYDKPIYEVICEKT--NGGVD  263 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHH-HHTTCSE-E--ECGGGCSSCHHHHHHHHT--TSCBS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHcCCcE-E--EecccccchHHHHHHHHh--CCCCC
Confidence            5789999995 9999999888877899 799999888776544 5666532 2  23322 112222222221  14799


Q ss_pred             EEEeCCCC
Q 024145           92 IMYNNAGI   99 (272)
Q Consensus        92 ~lv~~ag~   99 (272)
                      ++|.++|.
T Consensus       264 vvid~~g~  271 (373)
T 1p0f_A          264 YAVECAGR  271 (373)
T ss_dssp             EEEECSCC
T ss_pred             EEEECCCC
Confidence            99999973

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=96.81  E-value=0.0022  Score=55.65  Aligned_cols=75  Identities=19%  Similarity=0.407  Sum_probs=51.7

Q ss_pred             CCcEEEEeCCCChHHHHH-HHHH-HHcCCe-EEEeecCcc---hHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           14 EGKVAIITGGASGIGAMA-VELF-HENGAK-VVIADVQDK---LGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        14 ~~k~vlItGas~giG~ai-a~~l-a~~G~~-V~~~~r~~~---~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      +++++||+|+ |++|... ++.+ ...|++ |++++++++   +.+. .++++..  .+  |..+. ++.+ +.++   .
T Consensus       172 ~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~-~~~lGa~--~v--~~~~~-~~~~-i~~~---~  240 (357)
T 2b5w_A          172 DPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDI-IEELDAT--YV--DSRQT-PVED-VPDV---Y  240 (357)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHH-HHHTTCE--EE--ETTTS-CGGG-HHHH---S
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHH-HHHcCCc--cc--CCCcc-CHHH-HHHh---C
Confidence            4489999999 9999998 7666 567997 999999877   5554 4566643  22  54432 2222 3333   2


Q ss_pred             CCccEEEeCCCC
Q 024145           88 GKLDIMYNNAGI   99 (272)
Q Consensus        88 g~id~lv~~ag~   99 (272)
                      +++|++|.+.|.
T Consensus       241 gg~Dvvid~~g~  252 (357)
T 2b5w_A          241 EQMDFIYEATGF  252 (357)
T ss_dssp             CCEEEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999973

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=96.80  E-value=0.0015  Score=55.78  Aligned_cols=82  Identities=20%  Similarity=0.155  Sum_probs=55.8

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceE-EEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVC-YIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      ++.||+++|.|++.-+|+.+++.|+..|++|.++.|+....-+..+.+....+ ...+..++++++++.+.       ..
T Consensus       174 ~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e~l~-------~A  246 (320)
T 1edz_A          174 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSL-------DS  246 (320)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHH-------HC
T ss_pred             CCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHHHhc-------cC
Confidence            78999999999998899999999999999999998874432222222222111 11111234566655555       57


Q ss_pred             cEEEeCCCCC
Q 024145           91 DIMYNNAGIL  100 (272)
Q Consensus        91 d~lv~~ag~~  100 (272)
                      |+||...|..
T Consensus       247 DIVIsAtg~p  256 (320)
T 1edz_A          247 DVVITGVPSE  256 (320)
T ss_dssp             SEEEECCCCT
T ss_pred             CEEEECCCCC
Confidence            9999999863

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=96.79  E-value=0.0039  Score=54.39  Aligned_cols=76  Identities=17%  Similarity=0.221  Sum_probs=51.9

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHh-CCcc
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKF-GKLD   91 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~id   91 (272)
                      .|+++||+|+ |++|...++.+...|+ +|+++++++++.+.+ ++++... +  .|..+.+.    .+++.+.. +++|
T Consensus       190 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a-~~lGa~~-v--i~~~~~~~----~~~~~~~~~gg~D  260 (371)
T 1f8f_A          190 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELA-KQLGATH-V--INSKTQDP----VAAIKEITDGGVN  260 (371)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-HHHTCSE-E--EETTTSCH----HHHHHHHTTSCEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHcCCCE-E--ecCCccCH----HHHHHHhcCCCCc
Confidence            5789999995 9999999888777899 689999887766544 5666532 2  23333221    22333322 3699


Q ss_pred             EEEeCCC
Q 024145           92 IMYNNAG   98 (272)
Q Consensus        92 ~lv~~ag   98 (272)
                      ++|.++|
T Consensus       261 ~vid~~g  267 (371)
T 1f8f_A          261 FALESTG  267 (371)
T ss_dssp             EEEECSC
T ss_pred             EEEECCC
Confidence            9999997

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=96.78  E-value=0.0037  Score=52.76  Aligned_cols=72  Identities=19%  Similarity=0.282  Sum_probs=51.5

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      .++.||+++|.| .|+||+++++.|...|++|++.+|+.+..+... +.+.  ..+  +.   ++++++       ....
T Consensus       151 ~~l~g~~v~IiG-~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~-~~g~--~~~--~~---~~l~~~-------l~~a  214 (293)
T 3d4o_A          151 FTIHGANVAVLG-LGRVGMSVARKFAALGAKVKVGARESDLLARIA-EMGM--EPF--HI---SKAAQE-------LRDV  214 (293)
T ss_dssp             SCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTS--EEE--EG---GGHHHH-------TTTC
T ss_pred             CCCCCCEEEEEe-eCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-HCCC--eec--Ch---hhHHHH-------hcCC
Confidence            368999999999 589999999999999999999999876654433 3342  222  11   222222       2368


Q ss_pred             cEEEeCCC
Q 024145           91 DIMYNNAG   98 (272)
Q Consensus        91 d~lv~~ag   98 (272)
                      |+++++..
T Consensus       215 DvVi~~~p  222 (293)
T 3d4o_A          215 DVCINTIP  222 (293)
T ss_dssp             SEEEECCS
T ss_pred             CEEEECCC
Confidence            99999874

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=96.76  E-value=0.002  Score=53.47  Aligned_cols=69  Identities=20%  Similarity=0.304  Sum_probs=53.2

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   91 (272)
                      +++| +++|.|+ |++|+++++.|.+.|++|.+.+|+.++.+++.+..+..     .  .+.+   +    +    ...|
T Consensus       114 ~l~~-~v~iiG~-G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~~~~-----~--~~~~---~----~----~~~D  173 (263)
T 2d5c_A          114 PLKG-PALVLGA-GGAGRAVAFALREAGLEVWVWNRTPQRALALAEEFGLR-----A--VPLE---K----A----REAR  173 (263)
T ss_dssp             CCCS-CEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHTCE-----E--CCGG---G----G----GGCS
T ss_pred             CCCC-eEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccc-----h--hhHh---h----c----cCCC
Confidence            5788 8999996 88999999999999999999999988877777776542     1  1211   1    1    2689


Q ss_pred             EEEeCCCCC
Q 024145           92 IMYNNAGIL  100 (272)
Q Consensus        92 ~lv~~ag~~  100 (272)
                      ++|++.+..
T Consensus       174 ivi~~tp~~  182 (263)
T 2d5c_A          174 LLVNATRVG  182 (263)
T ss_dssp             EEEECSSTT
T ss_pred             EEEEccCCC
Confidence            999998754

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=96.73  E-value=0.0043  Score=54.52  Aligned_cols=49  Identities=22%  Similarity=0.276  Sum_probs=41.2

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCc
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQD   62 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~   62 (272)
                      .+.+++++|+|+ |.+|+.+++.+...|++|+++++++.+.+...+ ++..
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~-~Ga~  217 (384)
T 1l7d_A          169 TVPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVES-LGGK  217 (384)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHH-TTCE
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCe
Confidence            568999999996 899999999999999999999998877665543 6543

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=96.69  E-value=0.0059  Score=50.36  Aligned_cols=37  Identities=27%  Similarity=0.424  Sum_probs=31.1

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecC
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQ   48 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~   48 (272)
                      .++++++|+|.|+ ||+|.++++.|+..|. ++.+++++
T Consensus        24 ~~l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d   61 (251)
T 1zud_1           24 QKLLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDD   61 (251)
T ss_dssp             HHHHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCC
T ss_pred             HHHhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            3467889999997 7899999999999997 67887654

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=96.65  E-value=0.0064  Score=52.40  Aligned_cols=76  Identities=21%  Similarity=0.427  Sum_probs=52.1

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHc-CCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhC--Cc
Q 024145           14 EGKVAIITGGASGIGAMAVELFHEN-GAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFG--KL   90 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g--~i   90 (272)
                      .|+++||+|+ |++|...++.+... |++|+++++++++.+ +.++++.... +  |-.+ +.    .+++.+..+  ++
T Consensus       171 ~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~-~~~~lGa~~~-i--~~~~-~~----~~~v~~~t~g~g~  240 (345)
T 3jv7_A          171 PGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLA-LAREVGADAA-V--KSGA-GA----ADAIRELTGGQGA  240 (345)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHH-HHHHTTCSEE-E--ECST-TH----HHHHHHHHGGGCE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHH-HHHHcCCCEE-E--cCCC-cH----HHHHHHHhCCCCC
Confidence            5789999998 99999988777666 789999999887765 4456765432 2  2222 22    223333222  69


Q ss_pred             cEEEeCCCC
Q 024145           91 DIMYNNAGI   99 (272)
Q Consensus        91 d~lv~~ag~   99 (272)
                      |++|.+.|.
T Consensus       241 d~v~d~~G~  249 (345)
T 3jv7_A          241 TAVFDFVGA  249 (345)
T ss_dssp             EEEEESSCC
T ss_pred             eEEEECCCC
Confidence            999999983

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=96.65  E-value=0.046  Score=46.57  Aligned_cols=114  Identities=18%  Similarity=0.217  Sum_probs=71.1

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecC--cchHHHHHHHh-------CCceEEEEecCCCHHHHHHHHHH
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQ--DKLGEDLADKL-------GQDVCYIHCDISNEDEVINLVDT   82 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~--~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~   82 (272)
                      ++.+++.|+|+ |.+|.+++..|++.|. +|++.+++  ++..+....++       +........+  +.         
T Consensus         6 ~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~--d~---------   73 (315)
T 3tl2_A            6 IKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTS--DY---------   73 (315)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEES--CG---------
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcC--CH---------
Confidence            45678999997 9999999999999999 99999998  33333221111       1111111111  11         


Q ss_pred             HHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecc
Q 024145           83 AVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASA  151 (272)
Q Consensus        83 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~  151 (272)
                        +.+.+.|++|..+|....+     ..+-   .+.++.|..-...+.+.+..+   .+.+.++.+|-.
T Consensus        74 --~a~~~aDvVIiaag~p~kp-----g~~R---~dl~~~N~~i~~~i~~~i~~~---~p~a~vlvvsNP  129 (315)
T 3tl2_A           74 --ADTADSDVVVITAGIARKP-----GMSR---DDLVATNSKIMKSITRDIAKH---SPNAIIVVLTNP  129 (315)
T ss_dssp             --GGGTTCSEEEECCSCCCCT-----TCCH---HHHHHHHHHHHHHHHHHHHHH---CTTCEEEECCSS
T ss_pred             --HHhCCCCEEEEeCCCCCCC-----CCCH---HHHHHHHHHHHHHHHHHHHHh---CCCeEEEECCCh
Confidence              2234799999999975431     2232   345666776666666666554   356777777754

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=96.62  E-value=0.0032  Score=54.65  Aligned_cols=80  Identities=15%  Similarity=0.178  Sum_probs=49.7

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcch---HHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKL---GEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~---~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      .|+++||+||+|++|...++.+...|++++++.+..+.   ..+..++++.... +  |-.+ ...+. +.++....+++
T Consensus       167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~v-i--~~~~-~~~~~-~~~~~~~~~~~  241 (357)
T 1zsy_A          167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHV-I--TEEE-LRRPE-MKNFFKDMPQP  241 (357)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEE-E--EHHH-HHSGG-GGGTTSSSCCC
T ss_pred             CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEE-E--ecCc-chHHH-HHHHHhCCCCc
Confidence            67899999999999999888777789998877655432   2245566765422 2  2111 11111 11111111258


Q ss_pred             cEEEeCCC
Q 024145           91 DIMYNNAG   98 (272)
Q Consensus        91 d~lv~~ag   98 (272)
                      |++|.+.|
T Consensus       242 Dvvid~~g  249 (357)
T 1zsy_A          242 RLALNCVG  249 (357)
T ss_dssp             SEEEESSC
T ss_pred             eEEEECCC
Confidence            99999987

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=96.61  E-value=0.0054  Score=53.97  Aligned_cols=77  Identities=17%  Similarity=0.268  Sum_probs=53.4

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHh--CCc
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKF--GKL   90 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g~i   90 (272)
                      .|+++||.|+ |++|...++.+...|+ +|+++++++++.+.+ ++++..  .  .|..+.+++   .+++.+..  .++
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a-~~lGa~--~--i~~~~~~~~---~~~v~~~t~g~g~  255 (398)
T 1kol_A          185 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHA-KAQGFE--I--ADLSLDTPL---HEQIAALLGEPEV  255 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HHTTCE--E--EETTSSSCH---HHHHHHHHSSSCE
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHH-HHcCCc--E--EccCCcchH---HHHHHHHhCCCCC
Confidence            6789999995 9999998888777899 688898887766544 567653  2  344433222   22333322  269


Q ss_pred             cEEEeCCCC
Q 024145           91 DIMYNNAGI   99 (272)
Q Consensus        91 d~lv~~ag~   99 (272)
                      |++|.++|.
T Consensus       256 Dvvid~~G~  264 (398)
T 1kol_A          256 DCAVDAVGF  264 (398)
T ss_dssp             EEEEECCCT
T ss_pred             CEEEECCCC
Confidence            999999985

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=96.60  E-value=0.031  Score=47.79  Aligned_cols=115  Identities=13%  Similarity=0.170  Sum_probs=70.4

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHHHHHHHh-------CCceEEEEecCCCHHHHHHHHHHHH
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGEDLADKL-------GQDVCYIHCDISNEDEVINLVDTAV   84 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~~~   84 (272)
                      ++.+++.|+|+ |.+|.+++..|+..|. +|++.+++++..+....++       +....+...  .|.+          
T Consensus         5 m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t--~d~~----------   71 (324)
T 3gvi_A            5 MARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGA--NDYA----------   71 (324)
T ss_dssp             -CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEE--SSGG----------
T ss_pred             CcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEe--CCHH----------
Confidence            45578999998 9999999999999998 9999999887654222111       112222211  1211          


Q ss_pred             HHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccc
Q 024145           85 SKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASAC  152 (272)
Q Consensus        85 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~  152 (272)
                       .+.+.|++|..+|....+ +    .+   -.+.+..|..-...+.+.+..+   .+.+.++.+|-..
T Consensus        72 -a~~~aDiVIiaag~p~k~-G----~~---R~dl~~~N~~i~~~i~~~i~~~---~p~a~iivvtNPv  127 (324)
T 3gvi_A           72 -AIEGADVVIVTAGVPRKP-G----MS---RDDLLGINLKVMEQVGAGIKKY---APEAFVICITNPL  127 (324)
T ss_dssp             -GGTTCSEEEECCSCCCC-------------CHHHHHHHHHHHHHHHHHHHH---CTTCEEEECCSSH
T ss_pred             -HHCCCCEEEEccCcCCCC-C----CC---HHHHHHhhHHHHHHHHHHHHHH---CCCeEEEecCCCc
Confidence             223789999999865331 1    11   1234556766666666655544   2567777777543

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=96.57  E-value=0.0075  Score=53.12  Aligned_cols=77  Identities=19%  Similarity=0.187  Sum_probs=53.0

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHh-C-Cc
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKF-G-KL   90 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g-~i   90 (272)
                      .|+++||+|+ |++|...++.+...|+ +|+++++++++.+. .++++.  .+  +|..+.+.+   .+++.+.. + ++
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~-a~~lGa--~~--i~~~~~~~~---~~~~~~~~~g~g~  255 (398)
T 2dph_A          185 PGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKL-LSDAGF--ET--IDLRNSAPL---RDQIDQILGKPEV  255 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHH-HHTTTC--EE--EETTSSSCH---HHHHHHHHSSSCE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHH-HHHcCC--cE--EcCCCcchH---HHHHHHHhCCCCC
Confidence            6789999996 9999998888777899 89999998877654 455664  33  344432211   12222222 2 59


Q ss_pred             cEEEeCCCC
Q 024145           91 DIMYNNAGI   99 (272)
Q Consensus        91 d~lv~~ag~   99 (272)
                      |++|.++|.
T Consensus       256 Dvvid~~g~  264 (398)
T 2dph_A          256 DCGVDAVGF  264 (398)
T ss_dssp             EEEEECSCT
T ss_pred             CEEEECCCC
Confidence            999999985

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.54  E-value=0.0051  Score=54.57  Aligned_cols=73  Identities=21%  Similarity=0.214  Sum_probs=53.0

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEe
Q 024145           16 KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYN   95 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~   95 (272)
                      ..++|.|. |-+|+.+++.|.+.|..|++++++++..+.+.+   ..+.++..|.++++.++++      ...+.|.+|.
T Consensus         5 ~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~---~g~~vi~GDat~~~~L~~a------gi~~A~~viv   74 (413)
T 3l9w_A            5 MRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRK---FGMKVFYGDATRMDLLESA------GAAKAEVLIN   74 (413)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHH---TTCCCEESCTTCHHHHHHT------TTTTCSEEEE
T ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHh---CCCeEEEcCCCCHHHHHhc------CCCccCEEEE
Confidence            45888886 889999999999999999999999887765543   2355677788777765443      1124566665


Q ss_pred             CCC
Q 024145           96 NAG   98 (272)
Q Consensus        96 ~ag   98 (272)
                      +.+
T Consensus        75 ~~~   77 (413)
T 3l9w_A           75 AID   77 (413)
T ss_dssp             CCS
T ss_pred             CCC
Confidence            553

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=96.53  E-value=0.036  Score=47.52  Aligned_cols=115  Identities=10%  Similarity=0.076  Sum_probs=73.2

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCC--eEEEeecCcchHHHHHHHhC------CceEEEEecCCCHHHHHHHHHHHH
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGA--KVVIADVQDKLGEDLADKLG------QDVCYIHCDISNEDEVINLVDTAV   84 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~   84 (272)
                      ...+++.|+|+ |++|.+++..|+.+|.  +|++.+++++..+....++.      .....+..  .|.+          
T Consensus        17 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~--~d~~----------   83 (331)
T 4aj2_A           17 VPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSS--KDYS----------   83 (331)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEEC--SSGG----------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEc--CCHH----------
Confidence            45678999997 9999999999999987  79999998776554333221      11122222  1221          


Q ss_pred             HHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccc
Q 024145           85 SKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASAC  152 (272)
Q Consensus        85 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~  152 (272)
                       .+.+.|++|..+|....+ +    .+-   .+.++.|..-...+.+.+..+   .+.+.++++|-..
T Consensus        84 -~~~~aDiVvi~aG~~~kp-G----~tR---~dL~~~N~~I~~~i~~~i~~~---~p~a~vlvvtNPv  139 (331)
T 4aj2_A           84 -VTANSKLVIITAGARQQE-G----ESR---LNLVQRNVNIFKFIIPNVVKY---SPQCKLLIVSNPV  139 (331)
T ss_dssp             -GGTTEEEEEECCSCCCCT-T----CCG---GGGHHHHHHHHHHHHHHHHHH---CTTCEEEECSSSH
T ss_pred             -HhCCCCEEEEccCCCCCC-C----ccH---HHHHHHHHHHHHHHHHHHHHH---CCCeEEEEecChH
Confidence             123789999999975431 2    222   234666666666666666554   3567788877653

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=96.50  E-value=0.037  Score=47.30  Aligned_cols=114  Identities=15%  Similarity=0.162  Sum_probs=71.7

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHHHHHHHhC-------CceEEEEecCCCHHHHHHHHHHHHH
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGEDLADKLG-------QDVCYIHCDISNEDEVINLVDTAVS   85 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~-------~~~~~~~~D~~~~~~~~~~~~~~~~   85 (272)
                      +.+++.|+|+ |.+|.+++..|+..|. +|++.+++++..+....++.       ....+...+  +.+           
T Consensus         4 ~~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~--d~~-----------   69 (321)
T 3p7m_A            4 ARKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTN--DYK-----------   69 (321)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEES--CGG-----------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcC--CHH-----------
Confidence            4567888895 9999999999999987 99999998876553332221       122222111  211           


Q ss_pred             HhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccc
Q 024145           86 KFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASAC  152 (272)
Q Consensus        86 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~  152 (272)
                      .+.+.|++|..+|....+ +    .+-.   +.+..|..-...+.+.+..+-   +.+.++.+|-..
T Consensus        70 a~~~aDvVIi~ag~p~k~-G----~~R~---dl~~~N~~i~~~i~~~i~~~~---p~a~vivvtNPv  125 (321)
T 3p7m_A           70 DLENSDVVIVTAGVPRKP-G----MSRD---DLLGINIKVMQTVGEGIKHNC---PNAFVICITNPL  125 (321)
T ss_dssp             GGTTCSEEEECCSCCCCT-T----CCHH---HHHHHHHHHHHHHHHHHHHHC---TTCEEEECCSSH
T ss_pred             HHCCCCEEEEcCCcCCCC-C----CCHH---HHHHHhHHHHHHHHHHHHHHC---CCcEEEEecCch
Confidence            223689999999865331 2    2332   345667766666666655542   557777776543

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=96.49  E-value=0.011  Score=49.86  Aligned_cols=39  Identities=26%  Similarity=0.384  Sum_probs=35.4

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCc
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQD   49 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~   49 (272)
                      .+++||.++|.|+++-+|+.++..|++.|++|.++.|+.
T Consensus       161 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T  199 (300)
T 4a26_A          161 IEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGT  199 (300)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTS
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCC
Confidence            468999999999999999999999999999999887743

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=96.48  E-value=0.0048  Score=53.30  Aligned_cols=119  Identities=13%  Similarity=0.117  Sum_probs=67.8

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCC-------eEEEeecCcch--HHHHHHH---hC--CceEEEEecCCCHHHH
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGA-------KVVIADVQDKL--GEDLADK---LG--QDVCYIHCDISNEDEV   76 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~-------~V~~~~r~~~~--~~~~~~~---~~--~~~~~~~~D~~~~~~~   76 (272)
                      ..++.-+|.|+||+|+||..++..|++...       ++.+.+..+..  .+-..-+   ..  .....+..  ++..  
T Consensus        20 ~s~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~--~~~~--   95 (345)
T 4h7p_A           20 GSMSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVT--ADPR--   95 (345)
T ss_dssp             --CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEE--SCHH--
T ss_pred             CCCCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEc--CChH--
Confidence            445667999999999999999999998743       68888876532  2211111   11  11122221  1221  


Q ss_pred             HHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecc
Q 024145           77 INLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASA  151 (272)
Q Consensus        77 ~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~  151 (272)
                              +.+.+.|++|..||....+     ..+-+   +.++.|..=.-.+.+.+..+-  .+...|+.+|-.
T Consensus        96 --------~a~~~advVvi~aG~prkp-----GmtR~---DLl~~Na~I~~~~~~~i~~~a--~~~~~vlvvsNP  152 (345)
T 4h7p_A           96 --------VAFDGVAIAIMCGAFPRKA-----GMERK---DLLEMNARIFKEQGEAIAAVA--ASDCRVVVVGNP  152 (345)
T ss_dssp             --------HHTTTCSEEEECCCCCCCT-----TCCHH---HHHHHHHHHHHHHHHHHHHHS--CTTCEEEECSSS
T ss_pred             --------HHhCCCCEEEECCCCCCCC-----CCCHH---HHHHHhHHHHHHHHHHHHhhc--cCceEEEEeCCC
Confidence                    1234789999999976432     23443   346677665555555544332  234455665543

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=96.48  E-value=0.013  Score=48.19  Aligned_cols=77  Identities=12%  Similarity=0.140  Sum_probs=57.3

Q ss_pred             EEEEeCCCChHHHHHHHHHHHc-CCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEe
Q 024145           17 VAIITGGASGIGAMAVELFHEN-GAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYN   95 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~   95 (272)
                      ++.|.|++|.+|+.+++.+.+. +++++.+.......+++...   .+. +..|.+.++.+...+..+.+.  ++++|+-
T Consensus         2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~~---~~D-vvIDfT~p~a~~~~~~~a~~~--g~~~Vig   75 (245)
T 1p9l_A            2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTDG---NTE-VVIDFTHPDVVMGNLEFLIDN--GIHAVVG   75 (245)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHHT---TCC-EEEECSCTTTHHHHHHHHHHT--TCEEEEC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhcc---CCc-EEEEccChHHHHHHHHHHHHc--CCCEEEc
Confidence            5899999999999999999876 88887655444444444431   222 778999999988888776665  6888887


Q ss_pred             CCCC
Q 024145           96 NAGI   99 (272)
Q Consensus        96 ~ag~   99 (272)
                      ..|.
T Consensus        76 TTG~   79 (245)
T 1p9l_A           76 TTGF   79 (245)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            7763

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=96.45  E-value=0.0042  Score=52.85  Aligned_cols=68  Identities=15%  Similarity=0.207  Sum_probs=47.9

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      .|+++||+|+ |++|...++.+...|++|+.++ ++++.+ ..++++....+   |  |   .++    +   .+++|++
T Consensus       142 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~-~~~~~~-~~~~lGa~~v~---~--d---~~~----v---~~g~Dvv  203 (315)
T 3goh_A          142 KQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS-ASLSQA-LAAKRGVRHLY---R--E---PSQ----V---TQKYFAI  203 (315)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC-SSCCHH-HHHHHTEEEEE---S--S---GGG----C---CSCEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE-ChhhHH-HHHHcCCCEEE---c--C---HHH----h---CCCccEE
Confidence            6789999999 9999998888888899999999 666554 44567653222   3  2   222    2   3479999


Q ss_pred             EeCCCC
Q 024145           94 YNNAGI   99 (272)
Q Consensus        94 v~~ag~   99 (272)
                      |.+.|.
T Consensus       204 ~d~~g~  209 (315)
T 3goh_A          204 FDAVNS  209 (315)
T ss_dssp             ECC---
T ss_pred             EECCCc
Confidence            999874

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=96.45  E-value=0.0036  Score=54.15  Aligned_cols=77  Identities=18%  Similarity=0.242  Sum_probs=53.2

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhC--Cc
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFG--KL   90 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g--~i   90 (272)
                      .|+++||+|+ |++|...++.+...|+ +|+++++++++.+ +.++++....   .|..+.+    +.+++.+..+  ++
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~-~~~~lGa~~v---i~~~~~~----~~~~v~~~t~g~g~  236 (352)
T 3fpc_A          166 LGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCD-IALEYGATDI---INYKNGD----IVEQILKATDGKGV  236 (352)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHH-HHHHHTCCEE---ECGGGSC----HHHHHHHHTTTCCE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHH-HHHHhCCceE---EcCCCcC----HHHHHHHHcCCCCC
Confidence            5789999985 9999998888888899 7999998876654 5566765322   2333322    2333444332  59


Q ss_pred             cEEEeCCCC
Q 024145           91 DIMYNNAGI   99 (272)
Q Consensus        91 d~lv~~ag~   99 (272)
                      |++|.+.|.
T Consensus       237 D~v~d~~g~  245 (352)
T 3fpc_A          237 DKVVIAGGD  245 (352)
T ss_dssp             EEEEECSSC
T ss_pred             CEEEECCCC
Confidence            999999874

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=96.43  E-value=0.038  Score=47.14  Aligned_cols=114  Identities=13%  Similarity=0.120  Sum_probs=69.8

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCC--eEEEeecCcchHHHHHHHh-------CCceEEEEecCCCHHHHHHHHHHH
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGA--KVVIADVQDKLGEDLADKL-------GQDVCYIHCDISNEDEVINLVDTA   83 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~~   83 (272)
                      ++..++.|+|+ |.+|.+++..|+..|.  +|++.+.++++.+.....+       +..+.+. .|  +.+         
T Consensus         4 m~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~-~~--~~~---------   70 (317)
T 3d0o_A            4 FKGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVK-AG--EYS---------   70 (317)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEE-EC--CGG---------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEE-eC--CHH---------
Confidence            34468999998 9999999999999884  7999998876554322211       1222222 22  211         


Q ss_pred             HHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccc
Q 024145           84 VSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASAC  152 (272)
Q Consensus        84 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~  152 (272)
                        .+.+.|++|..+|....+     ..+..   ..+..|..-...+.+.+.++   .+.+.++++|-..
T Consensus        71 --a~~~aDvVvi~ag~~~~~-----g~~r~---dl~~~n~~i~~~i~~~i~~~---~p~a~viv~tNPv  126 (317)
T 3d0o_A           71 --DCHDADLVVICAGAAQKP-----GETRL---DLVSKNLKIFKSIVGEVMAS---KFDGIFLVATNPV  126 (317)
T ss_dssp             --GGTTCSEEEECCCCCCCT-----TCCHH---HHHHHHHHHHHHHHHHHHHT---TCCSEEEECSSSH
T ss_pred             --HhCCCCEEEECCCCCCCC-----CCcHH---HHHHHHHHHHHHHHHHHHHh---CCCcEEEEecCcH
Confidence              233789999999874331     12222   34565665555555555544   3567777765443

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=96.42  E-value=0.0064  Score=52.94  Aligned_cols=48  Identities=23%  Similarity=0.347  Sum_probs=42.6

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhC
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLG   60 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~   60 (272)
                      +++||+++|.|. |.+|..+++.|.+.|++|++.+++.+..+++.++.+
T Consensus       170 ~L~GktV~V~G~-G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~g  217 (364)
T 1leh_A          170 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEG  217 (364)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHC
T ss_pred             CCCcCEEEEECc-hHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcC
Confidence            689999999996 899999999999999999999998887777777664

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=96.36  E-value=0.0058  Score=51.08  Aligned_cols=39  Identities=28%  Similarity=0.473  Sum_probs=35.4

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCc
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQD   49 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~   49 (272)
                      .+++||+++|.|+++-+|+.++..|+++|++|.++.|+.
T Consensus       156 i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t  194 (285)
T 3p2o_A          156 IDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT  194 (285)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCc
Confidence            468999999999999999999999999999999887653

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=96.32  E-value=0.088  Score=43.84  Aligned_cols=162  Identities=13%  Similarity=0.060  Sum_probs=91.5

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHc-CCeEE-EeecCcchH--H-----------------HHHHHhCCceEEEEecCCCHH
Q 024145           16 KVAIITGGASGIGAMAVELFHEN-GAKVV-IADVQDKLG--E-----------------DLADKLGQDVCYIHCDISNED   74 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~-G~~V~-~~~r~~~~~--~-----------------~~~~~~~~~~~~~~~D~~~~~   74 (272)
                      -++.|+|++|.+|+.+++.+.+. |++++ ++++++...  +                 .+.+.+. .+ -+..|++.++
T Consensus         6 mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~~~dl~~~l~-~~-DvVIDft~p~   83 (273)
T 1dih_A            6 IRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKD-DF-DVFIDFTRPE   83 (273)
T ss_dssp             EEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTT-SC-SEEEECSCHH
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCCcCCceecCCHHHHhc-CC-CEEEEcCChH
Confidence            47999999999999999998854 77766 445543210  0                 0001111 12 2445889999


Q ss_pred             HHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHH----------------HHhHHHHHHHHHHHHhhc
Q 024145           75 EVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLIN----------------VNTIGGFLGAKHAARVMV  138 (272)
Q Consensus        75 ~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~----------------~n~~~~~~l~~~~~~~~~  138 (272)
                      .....+..+.+.  ++.+++-..|..           .++.++..+                +|+  .+.+++.+.+.+.
T Consensus        84 ~~~~~~~~a~~~--G~~vVigTtG~~-----------~e~~~~L~~~a~~~~vv~a~N~siGvn~--~~~l~~~aa~~~~  148 (273)
T 1dih_A           84 GTLNHLAFCRQH--GKGMVIGTTGFD-----------EAGKQAIRDAAADIAIVFAANFSVGVNV--MLKLLEKAAKVMG  148 (273)
T ss_dssp             HHHHHHHHHHHT--TCEEEECCCCCC-----------HHHHHHHHHHTTTSCEEECSCCCHHHHH--HHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHhC--CCCEEEECCCCC-----------HHHHHHHHHhcCCCCEEEEecCcHHHHH--HHHHHHHHHHhcC
Confidence            888888777665  577777666532           232222221                221  2344444555443


Q ss_pred             CCCCceEEEEecccccccCCCCchhhhhHHHHHHHHHHHHHHh---------------cCCCcEEEEEeCCcccCC
Q 024145          139 PQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAEL---------------GQYGIRVNCVSPYGLATG  199 (272)
Q Consensus       139 ~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~---------------~~~gi~v~~i~Pg~v~t~  199 (272)
                      .  .-.|=.+ -.  .....--.+|+.++...+.+.+.+...+               .+.+|.+.+++-|.+-..
T Consensus       149 ~--~~dieii-E~--Hh~~K~DaPSGTA~~~ae~i~~~~~~~~~~~~~~~r~~~~~~r~~~~i~i~s~R~g~vvg~  219 (273)
T 1dih_A          149 D--YTDIEII-EA--HHRHKVDAPSGTALAMGEAIAHALDKDLKDCAVYSREGHTGERVPGTIGFATVRAGDIVGE  219 (273)
T ss_dssp             T--TSEEEEE-EE--ECTTCCSSSCHHHHHHHHHHHHHTTCCGGGTEECCCCSCCCSCCTTCEEEEEEECTTCCEE
T ss_pred             C--CCCEEEE-Ee--ecCCCCCCCCHHHHHHHHHHHHhhCCCccccccccccCccCCCCCCcceEEEEeCCCCCcc
Confidence            1  1111111 11  1122334578999988888876655432               135788999986655443

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=96.26  E-value=0.017  Score=49.62  Aligned_cols=80  Identities=23%  Similarity=0.294  Sum_probs=51.9

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCeE-EEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGAKV-VIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~~V-~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   91 (272)
                      ..|++++|+|+ |++|...++.+...|+++ +++++++++. ++.++++....+   |..+.+. .+...++. .....|
T Consensus       159 ~~g~~VlV~Ga-G~vG~~aiq~ak~~G~~~vi~~~~~~~k~-~~a~~lGa~~~i---~~~~~~~-~~~~~~~~-~~~g~d  231 (346)
T 4a2c_A          159 CENKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKL-ALAKSFGAMQTF---NSSEMSA-PQMQSVLR-ELRFNQ  231 (346)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHH-HHHHHTTCSEEE---ETTTSCH-HHHHHHHG-GGCSSE
T ss_pred             CCCCEEEEECC-CCcchHHHHHHHHcCCcEEEEEechHHHH-HHHHHcCCeEEE---eCCCCCH-HHHHHhhc-ccCCcc
Confidence            36789999987 899999998888889875 5677776654 455677754332   3322221 12222222 234689


Q ss_pred             EEEeCCCC
Q 024145           92 IMYNNAGI   99 (272)
Q Consensus        92 ~lv~~ag~   99 (272)
                      +++.+.|.
T Consensus       232 ~v~d~~G~  239 (346)
T 4a2c_A          232 LILETAGV  239 (346)
T ss_dssp             EEEECSCS
T ss_pred             cccccccc
Confidence            99998873

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=96.25  E-value=0.006  Score=52.40  Aligned_cols=72  Identities=10%  Similarity=0.125  Sum_probs=56.8

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEE
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMY   94 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv   94 (272)
                      .+.++|.|+ |.+|+.+++.|.++|. |++++++++..+ +.+   ..+.++..|.++++.++++      ...+.|.++
T Consensus       115 ~~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~---~~~~~i~gd~~~~~~L~~a------~i~~a~~vi  182 (336)
T 1lnq_A          115 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK-VLR---SGANFVHGDPTRVSDLEKA------NVRGARAVI  182 (336)
T ss_dssp             -CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHH---TTCEEEESCTTSHHHHHHT------CSTTEEEEE
T ss_pred             cCCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHh---CCcEEEEeCCCCHHHHHhc------ChhhccEEE
Confidence            457999996 8999999999999999 999999988776 432   4578999999999887653      112678888


Q ss_pred             eCCC
Q 024145           95 NNAG   98 (272)
Q Consensus        95 ~~ag   98 (272)
                      ...+
T Consensus       183 ~~~~  186 (336)
T 1lnq_A          183 VDLE  186 (336)
T ss_dssp             ECCS
T ss_pred             EcCC
Confidence            7653

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=96.20  E-value=0.097  Score=44.09  Aligned_cols=111  Identities=14%  Similarity=0.065  Sum_probs=68.0

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCC--eEEEeecCcchHHHH----HHHh---CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           17 VAIITGGASGIGAMAVELFHENGA--KVVIADVQDKLGEDL----ADKL---GQDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~--~V~~~~r~~~~~~~~----~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      ++.|+|+ |.+|.+++..|++.|.  +|++.+++++..+..    .+..   +....+...  +|.+.           +
T Consensus         2 kI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~~a-----------~   67 (294)
T 1oju_A            2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYSL-----------L   67 (294)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCGGG-----------G
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CCHHH-----------h
Confidence            5789999 9999999999999997  899999988765421    1111   112222211  12221           2


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccc
Q 024145           88 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASAC  152 (272)
Q Consensus        88 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~  152 (272)
                      .+.|++|..+|....+     ..+..   +.++.|..-...+.+.+..+   .+.+.++.+|-..
T Consensus        68 ~~aDiVViaag~~~kp-----G~~R~---dl~~~N~~i~~~i~~~i~~~---~p~a~iivvsNPv  121 (294)
T 1oju_A           68 KGSEIIVVTAGLARKP-----GMTRL---DLAHKNAGIIKDIAKKIVEN---APESKILVVTNPM  121 (294)
T ss_dssp             TTCSEEEECCCCCCCS-----SCCHH---HHHHHHHHHHHHHHHHHHTT---STTCEEEECSSSH
T ss_pred             CCCCEEEECCCCCCCC-----CCcHH---HHHHHHHHHHHHHHHHHHhh---CCCeEEEEeCCcc
Confidence            3689999999975331     22333   34666655555555544433   3567777777543

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=96.20  E-value=0.042  Score=46.77  Aligned_cols=113  Identities=18%  Similarity=0.171  Sum_probs=68.6

Q ss_pred             EEEEeCCCChHHHHHHHHHHHc-C--CeEEEeecCcchHHHHHHHhC--CceEEEEe-cCCCHHHHHHHHHHHHHHhCCc
Q 024145           17 VAIITGGASGIGAMAVELFHEN-G--AKVVIADVQDKLGEDLADKLG--QDVCYIHC-DISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~-G--~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~-D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      ++.|+||+|.+|.+++..|+++ +  .++++.+.++....+..+...  ........ .-.+.++           +.+.
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~~~~G~a~Dl~~~~~~~~v~~~~~~~~~~~-----------~~~a   70 (312)
T 3hhp_A            2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATPA-----------LEGA   70 (312)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSSTTHHHHHHHHHTSCSSEEEEEECSSCCHHH-----------HTTC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCCCchhHHHHhhCCCCCceEEEecCCCcHHH-----------hCCC
Confidence            6889999999999999999886 5  479999987622122222211  11222211 1112222           2379


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecc
Q 024145           91 DIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASA  151 (272)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~  151 (272)
                      |++|..+|....+     ..+-   .+.++.|..-...+.+.+..+   .+.+.++.+|-.
T Consensus        71 Divii~ag~~rkp-----G~~R---~dll~~N~~I~~~i~~~i~~~---~p~a~vlvvtNP  120 (312)
T 3hhp_A           71 DVVLISAGVARKP-----GMDR---SDLFNVNAGIVKNLVQQVAKT---CPKACIGIITNP  120 (312)
T ss_dssp             SEEEECCSCSCCT-----TCCH---HHHHHHHHHHHHHHHHHHHHH---CTTSEEEECSSC
T ss_pred             CEEEEeCCCCCCC-----CCCH---HHHHHHHHHHHHHHHHHHHHH---CCCcEEEEecCc
Confidence            9999999975331     2232   445677777666666666554   256777777653

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=96.19  E-value=0.0013  Score=56.95  Aligned_cols=46  Identities=26%  Similarity=0.426  Sum_probs=37.7

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL   59 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~   59 (272)
                      +++||++.|.| .|.||+.+++.+.+.|++|++.++++.. .+..++.
T Consensus       172 ~L~GktV~I~G-~GnVG~~~A~~l~~~GakVvvsD~~~~~-~~~a~~~  217 (355)
T 1c1d_A          172 SLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTER-VAHAVAL  217 (355)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHH-HHHHHHT
T ss_pred             CCCCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEEeCCccH-HHHHHhc
Confidence            68999999997 6999999999999999999988877554 3344444

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=96.17  E-value=0.13  Score=44.01  Aligned_cols=40  Identities=25%  Similarity=0.223  Sum_probs=34.7

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHHH
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGED   54 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~~   54 (272)
                      +..++.|.|| |.+|.+++..|++.|. +|++.+++++..+.
T Consensus         8 ~~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~   48 (331)
T 1pzg_A            8 RRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEG   48 (331)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHH
Confidence            3457999998 9999999999999998 99999999876654

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=96.17  E-value=0.072  Score=45.34  Aligned_cols=111  Identities=18%  Similarity=0.174  Sum_probs=66.4

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCC--eEEEeecCcchHHHHHHHh-------CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           17 VAIITGGASGIGAMAVELFHENGA--KVVIADVQDKLGEDLADKL-------GQDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      ++.|+|+ |.+|.+++..|++.|.  +|++.++++++.+....++       +........|.  .           +.+
T Consensus         2 kv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~~--~-----------~a~   67 (314)
T 3nep_X            2 KVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTND--Y-----------GPT   67 (314)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEESS--S-----------GGG
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECCC--H-----------HHh
Confidence            5788996 9999999999999986  8999999887654322221       12233332221  1           123


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccc
Q 024145           88 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASAC  152 (272)
Q Consensus        88 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~  152 (272)
                      ...|++|..+|....+ +    .+   -.+.++.|+.-...+.+.+..+   .+.+.++.+|-..
T Consensus        68 ~~aDvVii~ag~~~kp-G----~~---R~dl~~~N~~i~~~i~~~i~~~---~p~a~vivvtNPv  121 (314)
T 3nep_X           68 EDSDVCIITAGLPRSP-G----MS---RDDLLAKNTEIVGGVTEQFVEG---SPDSTIIVVANPL  121 (314)
T ss_dssp             TTCSEEEECCCC---------------CHHHHHHHHHHHHHHHHHHHTT---CTTCEEEECCSSH
T ss_pred             CCCCEEEECCCCCCCC-C----CC---HHHHHHhhHHHHHHHHHHHHHh---CCCcEEEecCCch
Confidence            4789999999975331 1    11   2244566665555555544432   3567777776543

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=96.15  E-value=0.036  Score=47.30  Aligned_cols=115  Identities=16%  Similarity=0.164  Sum_probs=67.4

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCC--eEEEeecCcchHHHHHHHhCCceEE-EEecCCCHHHHHHHHHHHHHHhCCccE
Q 024145           16 KVAIITGGASGIGAMAVELFHENGA--KVVIADVQDKLGEDLADKLGQDVCY-IHCDISNEDEVINLVDTAVSKFGKLDI   92 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~-~~~D~~~~~~~~~~~~~~~~~~g~id~   92 (272)
                      .++.|+|+ |.+|..++..|+..|.  +|++.+.++++.+.....+.....+ ..+.+.. .+        .+.+.+.|+
T Consensus         8 ~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~-~~--------~~a~~~aDv   77 (318)
T 1y6j_A            8 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYA-GD--------YSDVKDCDV   77 (318)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC---C--------GGGGTTCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEE-CC--------HHHhCCCCE
Confidence            47888898 9999999999999987  8999999876655444444221100 0111111 01        122347899


Q ss_pred             EEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecc
Q 024145           93 MYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASA  151 (272)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~  151 (272)
                      +|..+|....+     ..+.   .+.+..|+.-...+++.+.++   .+.+.++++|-.
T Consensus        78 Vii~~g~p~k~-----g~~r---~dl~~~n~~i~~~i~~~i~~~---~p~a~viv~tNP  125 (318)
T 1y6j_A           78 IVVTAGANRKP-----GETR---LDLAKKNVMIAKEVTQNIMKY---YNHGVILVVSNP  125 (318)
T ss_dssp             EEECCCC-----------CH---HHHHHHHHHHHHHHHHHHHHH---CCSCEEEECSSS
T ss_pred             EEEcCCCCCCC-----CcCH---HHHHHhhHHHHHHHHHHHHHh---CCCcEEEEecCc
Confidence            99999864321     1122   234677777666777766665   356777776544

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=96.13  E-value=0.083  Score=45.20  Aligned_cols=115  Identities=15%  Similarity=0.106  Sum_probs=71.5

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCC--eEEEeecCcchHHHHHHHhC------CceEEEEecCCCHHHHHHHHHHH
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGA--KVVIADVQDKLGEDLADKLG------QDVCYIHCDISNEDEVINLVDTA   83 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~   83 (272)
                      +.+..++.|+|+ |.+|.+++..|+..+.  +|++.+.++++.+....++.      ..+.+. .|  +.++        
T Consensus         6 ~~~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~~--~~~a--------   73 (326)
T 2zqz_A            6 DKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIY-SA--EYSD--------   73 (326)
T ss_dssp             CCCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEE-EC--CGGG--------
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEE-EC--CHHH--------
Confidence            335568999998 9999999999998885  79999998776654433331      122222 22  2221        


Q ss_pred             HHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccc
Q 024145           84 VSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASAC  152 (272)
Q Consensus        84 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~  152 (272)
                         +.+.|++|..+|....+     ..+-.   ..+..|+.-...+.+.+..+   .+.+.++++|-..
T Consensus        74 ---~~~aDvVii~ag~~~k~-----g~~R~---dl~~~n~~i~~~i~~~i~~~---~p~a~iiv~tNPv  128 (326)
T 2zqz_A           74 ---AKDADLVVITAGAPQKP-----GETRL---DLVNKNLKILKSIVDPIVDS---GFNGIFLVAANPV  128 (326)
T ss_dssp             ---GGGCSEEEECCCCC----------CHH---HHHHHHHHHHHHHHHHHHHH---TCCSEEEECSSSH
T ss_pred             ---hCCCCEEEEcCCCCCCC-----CCCHH---HHHHHHHHHHHHHHHHHHHH---CCCeEEEEeCCcH
Confidence               23689999999864321     12222   34566666655665555554   3567788875543

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=96.13  E-value=0.0058  Score=52.29  Aligned_cols=76  Identities=20%  Similarity=0.314  Sum_probs=50.8

Q ss_pred             Cc-EEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           15 GK-VAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        15 ~k-~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      |+ ++||+||+|++|...++.+...|++|+++++++++.+.+ ++++.... +  |..+.+  .+.+.++  ..+++|++
T Consensus       150 g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~-~~lGa~~v-~--~~~~~~--~~~~~~~--~~~~~d~v  221 (330)
T 1tt7_A          150 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYL-KQLGASEV-I--SREDVY--DGTLKAL--SKQQWQGA  221 (330)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHH-HHHTCSEE-E--EHHHHC--SSCCCSS--CCCCEEEE
T ss_pred             CCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCCcEE-E--ECCCch--HHHHHHh--hcCCccEE
Confidence            44 799999999999999998888999999999987776544 45665322 2  221110  0001111  11368999


Q ss_pred             EeCCC
Q 024145           94 YNNAG   98 (272)
Q Consensus        94 v~~ag   98 (272)
                      |.++|
T Consensus       222 id~~g  226 (330)
T 1tt7_A          222 VDPVG  226 (330)
T ss_dssp             EESCC
T ss_pred             EECCc
Confidence            99997

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=96.10  E-value=0.034  Score=46.52  Aligned_cols=79  Identities=13%  Similarity=0.134  Sum_probs=55.8

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCC---eEEEeecCcchHHHHHHHhC-------------CceEEEEecCCCHHHHHH
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGA---KVVIADVQDKLGEDLADKLG-------------QDVCYIHCDISNEDEVIN   78 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~---~V~~~~r~~~~~~~~~~~~~-------------~~~~~~~~D~~~~~~~~~   78 (272)
                      .+++.|.|+ |.+|.++++.|++.|+   +|++.+|+++..+.+.+..+             .++.++.+   .+..++.
T Consensus         3 ~~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav---~p~~~~~   78 (280)
T 3tri_A            3 TSNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAV---KPHQIKM   78 (280)
T ss_dssp             CSCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECS---CGGGHHH
T ss_pred             CCEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEe---CHHHHHH
Confidence            356788886 9999999999999998   89999999988877766432             12333333   3566677


Q ss_pred             HHHHHHHH-hCCcc-EEEeCCC
Q 024145           79 LVDTAVSK-FGKLD-IMYNNAG   98 (272)
Q Consensus        79 ~~~~~~~~-~g~id-~lv~~ag   98 (272)
                      +++++... .. .+ ++|++++
T Consensus        79 vl~~l~~~~l~-~~~iiiS~~a   99 (280)
T 3tri_A           79 VCEELKDILSE-TKILVISLAV   99 (280)
T ss_dssp             HHHHHHHHHHT-TTCEEEECCT
T ss_pred             HHHHHHhhccC-CCeEEEEecC
Confidence            77777655 43 34 7777655

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=96.09  E-value=0.013  Score=52.83  Aligned_cols=74  Identities=19%  Similarity=0.232  Sum_probs=59.8

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEe
Q 024145           16 KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYN   95 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~   95 (272)
                      .+++|.|+ |-+|+.+++.|.++|++|++++++++..+.+.+.+  .+.++..|.++++-++++=-      .+.|.+|.
T Consensus         4 M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~--~~~~i~Gd~~~~~~L~~Agi------~~ad~~ia   74 (461)
T 4g65_A            4 MKIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY--DLRVVNGHASHPDVLHEAGA------QDADMLVA   74 (461)
T ss_dssp             EEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS--SCEEEESCTTCHHHHHHHTT------TTCSEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc--CcEEEEEcCCCHHHHHhcCC------CcCCEEEE
Confidence            46788886 79999999999999999999999999888777665  46789999999988765411      26788876


Q ss_pred             CCC
Q 024145           96 NAG   98 (272)
Q Consensus        96 ~ag   98 (272)
                      ..+
T Consensus        75 ~t~   77 (461)
T 4g65_A           75 VTN   77 (461)
T ss_dssp             CCS
T ss_pred             EcC
Confidence            554

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=96.05  E-value=0.049  Score=46.10  Aligned_cols=109  Identities=14%  Similarity=0.153  Sum_probs=63.5

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCC--eEEEeecCcchHHHHHHHhCC------ceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145           17 VAIITGGASGIGAMAVELFHENGA--KVVIADVQDKLGEDLADKLGQ------DVCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~------~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      ++.|+|+ |.+|..++..|+..|.  +|++.+++++..+.....+..      ...+. .  .+.+           .+.
T Consensus         2 kI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~-~--~~~~-----------a~~   66 (304)
T 2v6b_A            2 KVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVW-H--GGHS-----------ELA   66 (304)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEE-E--ECGG-----------GGT
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEE-E--CCHH-----------HhC
Confidence            6889998 9999999999999998  899999988765543333321      11221 1  1211           123


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecc
Q 024145           89 KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASA  151 (272)
Q Consensus        89 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~  151 (272)
                      +.|++|..++....+ +    .+   -.+.+..|..-...+.+.+.++   .+.+.++++|-.
T Consensus        67 ~aDvVIi~~~~~~~~-g----~~---r~dl~~~n~~i~~~i~~~i~~~---~p~~~vi~~tNP  118 (304)
T 2v6b_A           67 DAQVVILTAGANQKP-G----ES---RLDLLEKNADIFRELVPQITRA---APDAVLLVTSNP  118 (304)
T ss_dssp             TCSEEEECC--------------------CHHHHHHHHHHHHHHHHHH---CSSSEEEECSSS
T ss_pred             CCCEEEEcCCCCCCC-C----Cc---HHHHHHhHHHHHHHHHHHHHHh---CCCeEEEEecCc
Confidence            789999999864321 1    11   1223455666555666666554   245666665433

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=96.00  E-value=0.013  Score=49.05  Aligned_cols=39  Identities=18%  Similarity=0.210  Sum_probs=35.1

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCc
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQD   49 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~   49 (272)
                      .+++||.++|.|.++-+|+.++..|+..|++|.++.++.
T Consensus       157 i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T  195 (286)
T 4a5o_A          157 ADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFT  195 (286)
T ss_dssp             CCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCC
Confidence            468999999999999999999999999999999887643

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=95.99  E-value=0.014  Score=48.48  Aligned_cols=36  Identities=8%  Similarity=0.125  Sum_probs=33.7

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecC
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQ   48 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~   48 (272)
                      ++||+++|.|+++-+|+.++..|+++|++|.++.++
T Consensus       148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~  183 (276)
T 3ngx_A          148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSK  183 (276)
T ss_dssp             CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCC
Confidence            899999999999999999999999999999988764

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=95.96  E-value=0.15  Score=43.56  Aligned_cols=113  Identities=12%  Similarity=0.011  Sum_probs=69.3

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC--eEEEeecCcchHHHHHHHh------CCceEEE-EecCCCHHHHHHHHHHHH
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGA--KVVIADVQDKLGEDLADKL------GQDVCYI-HCDISNEDEVINLVDTAV   84 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~------~~~~~~~-~~D~~~~~~~~~~~~~~~   84 (272)
                      ..+++.|+|+ |.+|..++..|+..|.  +|++.+.+++..+....++      ....... ..|..+            
T Consensus        20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~------------   86 (330)
T 3ldh_A           20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV------------   86 (330)
T ss_dssp             CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS------------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH------------
Confidence            3468999998 9999999999999996  8999999876554332222      1111222 223322            


Q ss_pred             HHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccc
Q 024145           85 SKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASAC  152 (272)
Q Consensus        85 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~  152 (272)
                        +.+.|++|..+|....+ +.    +-   .+.+..|..-...+.+.+.++   .+.+.++.+|-..
T Consensus        87 --~~daDiVIitaG~p~kp-G~----tR---~dll~~N~~I~k~i~~~I~k~---~P~a~ilvvtNPv  141 (330)
T 3ldh_A           87 --SAGSKLVVITAGARQQE-GE----SR---LNLVQRNVNIFKFIIPNIVKH---SPDCLKELHPELG  141 (330)
T ss_dssp             --CSSCSEEEECCSCCCCS-SC----CT---TGGGHHHHHHHHHHHHHHHHH---CTTCEEEECSSSH
T ss_pred             --hCCCCEEEEeCCCCCCC-CC----CH---HHHHHhhHHHHHHHHHHHHhh---CCCceEEeCCCcc
Confidence              23789999999975432 21    11   123444554444555555544   3567777777543

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=95.89  E-value=0.014  Score=48.82  Aligned_cols=38  Identities=21%  Similarity=0.311  Sum_probs=34.5

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecC
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQ   48 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~   48 (272)
                      .+++||.++|.|+++-+|+.++..|+.+|++|.++.|+
T Consensus       157 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~  194 (285)
T 3l07_A          157 IKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRF  194 (285)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC
Confidence            46899999999999999999999999999999887654

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=95.86  E-value=0.0059  Score=58.79  Aligned_cols=76  Identities=18%  Similarity=0.257  Sum_probs=50.3

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHh--CCcc
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKF--GKLD   91 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g~id   91 (272)
                      .|.++||.||+|++|.+.++.....|++|+.+++++ +.+ ..+ ++....   .|-.+.+.    .+++.+..  .++|
T Consensus       345 ~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~~~~-k~~-~l~-lga~~v---~~~~~~~~----~~~i~~~t~g~GvD  414 (795)
T 3slk_A          345 PGESLLVHSAAGGVGMAAIQLARHLGAEVYATASED-KWQ-AVE-LSREHL---ASSRTCDF----EQQFLGATGGRGVD  414 (795)
T ss_dssp             TTCCEEEESTTBHHHHHHHHHHHHTTCCEEEECCGG-GGG-GSC-SCGGGE---ECSSSSTH----HHHHHHHSCSSCCS
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeChH-Hhh-hhh-cChhhe---eecCChhH----HHHHHHHcCCCCeE
Confidence            678999999999999998888888899999998765 222 112 443222   23333322    23344433  2599


Q ss_pred             EEEeCCCC
Q 024145           92 IMYNNAGI   99 (272)
Q Consensus        92 ~lv~~ag~   99 (272)
                      +++++.|.
T Consensus       415 vVld~~gg  422 (795)
T 3slk_A          415 VVLNSLAG  422 (795)
T ss_dssp             EEEECCCT
T ss_pred             EEEECCCc
Confidence            99998764

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=95.84  E-value=0.15  Score=43.23  Aligned_cols=110  Identities=15%  Similarity=0.180  Sum_probs=70.1

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcC--CeEEEeecCcchHHHHHHHhCC------ceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145           17 VAIITGGASGIGAMAVELFHENG--AKVVIADVQDKLGEDLADKLGQ------DVCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G--~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      ++.|+|+ |.+|.+++..|+..+  .++++.+.++++.+....++..      .+.+. .|  +.++           +.
T Consensus         2 KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~-~~--~~~a-----------~~   66 (310)
T 2xxj_A            2 KVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVW-AG--SYGD-----------LE   66 (310)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEE-EC--CGGG-----------GT
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEE-EC--CHHH-----------hC
Confidence            6889998 999999999999987  5799999987766544433321      22222 22  2222           33


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccc
Q 024145           89 KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASAC  152 (272)
Q Consensus        89 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~  152 (272)
                      +.|++|..+|....+     ..+-.   ..+..|..-...+.+.+..+   .+.+.++++|-..
T Consensus        67 ~aD~Vii~ag~~~~~-----g~~r~---dl~~~n~~i~~~i~~~i~~~---~p~a~iiv~tNPv  119 (310)
T 2xxj_A           67 GARAVVLAAGVAQRP-----GETRL---QLLDRNAQVFAQVVPRVLEA---APEAVLLVATNPV  119 (310)
T ss_dssp             TEEEEEECCCCCCCT-----TCCHH---HHHHHHHHHHHHHHHHHHHH---CTTCEEEECSSSH
T ss_pred             CCCEEEECCCCCCCC-----CcCHH---HHHHhhHHHHHHHHHHHHHH---CCCcEEEEecCch
Confidence            789999999875331     22332   33566666555555555544   3567788875543

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=95.81  E-value=0.027  Score=48.42  Aligned_cols=77  Identities=27%  Similarity=0.389  Sum_probs=49.6

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHc-CCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhC--C
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHEN-GAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFG--K   89 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g--~   89 (272)
                      ..|.++||.|+ |++|...+..+... |++|+++++++++.+ +.++++....+   |-.+.+..    +++.+..+  .
T Consensus       162 ~~g~~VlV~Ga-G~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~-~~~~~Ga~~~i---~~~~~~~~----~~v~~~t~g~g  232 (348)
T 4eez_A          162 KPGDWQVIFGA-GGLGNLAIQYAKNVFGAKVIAVDINQDKLN-LAKKIGADVTI---NSGDVNPV----DEIKKITGGLG  232 (348)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTSCCEEEEEESCHHHHH-HHHHTTCSEEE---EC-CCCHH----HHHHHHTTSSC
T ss_pred             CCCCEEEEEcC-CCccHHHHHHHHHhCCCEEEEEECcHHHhh-hhhhcCCeEEE---eCCCCCHH----HHhhhhcCCCC
Confidence            35789999987 77887777777665 789999999887654 45566654332   33333322    23333332  4


Q ss_pred             ccEEEeCCC
Q 024145           90 LDIMYNNAG   98 (272)
Q Consensus        90 id~lv~~ag   98 (272)
                      +|.++.+++
T Consensus       233 ~d~~~~~~~  241 (348)
T 4eez_A          233 VQSAIVCAV  241 (348)
T ss_dssp             EEEEEECCS
T ss_pred             ceEEEEecc
Confidence            788888876

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=95.73  E-value=0.073  Score=45.72  Aligned_cols=37  Identities=14%  Similarity=0.285  Sum_probs=31.6

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecC
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQ   48 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~   48 (272)
                      ..+++++|+|.|+ ||+|.++++.|+..|. ++.+++++
T Consensus        30 ~kL~~~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D   67 (340)
T 3rui_A           30 DIIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNG   67 (340)
T ss_dssp             HHHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             HHHhCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCC
Confidence            3567899999995 7999999999999997 68888764

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=95.73  E-value=0.016  Score=50.28  Aligned_cols=38  Identities=21%  Similarity=0.481  Sum_probs=32.4

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCc
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQD   49 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~   49 (272)
                      .++++++|+|.|+ ||+|.++++.|+..|. ++.+++++.
T Consensus       114 ~~L~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~  152 (353)
T 3h5n_A          114 DKLKNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQ  152 (353)
T ss_dssp             HHHHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCB
T ss_pred             HHHhCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCc
Confidence            3467889999997 8999999999999997 688888753

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=95.67  E-value=0.024  Score=48.82  Aligned_cols=76  Identities=18%  Similarity=0.154  Sum_probs=46.1

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcC-CeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENG-AKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDI   92 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   92 (272)
                      .|+++||+|++|++|...++.+...| .+|+.+++ .++.+ ..+ .+... ++  | .+.+..+. +.++.  .+++|+
T Consensus       142 ~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~~-~~~~~-~~~-~ga~~-~~--~-~~~~~~~~-~~~~~--~~g~Dv  211 (349)
T 4a27_A          142 EGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTAS-TFKHE-AIK-DSVTH-LF--D-RNADYVQE-VKRIS--AEGVDI  211 (349)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEEC-GGGHH-HHG-GGSSE-EE--E-TTSCHHHH-HHHHC--TTCEEE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeCC-HHHHH-HHH-cCCcE-EE--c-CCccHHHH-HHHhc--CCCceE
Confidence            67899999999999999877665564 67887774 33333 333 54432 22  3 22222222 22221  247999


Q ss_pred             EEeCCCC
Q 024145           93 MYNNAGI   99 (272)
Q Consensus        93 lv~~ag~   99 (272)
                      +|.+.|.
T Consensus       212 v~d~~g~  218 (349)
T 4a27_A          212 VLDCLCG  218 (349)
T ss_dssp             EEEECC-
T ss_pred             EEECCCc
Confidence            9999973

>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A

Probab=95.61  E-value=0.022  Score=47.41  Aligned_cols=38  Identities=16%  Similarity=0.276  Sum_probs=34.1

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHc--CCeEEEeecCc
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHEN--GAKVVIADVQD   49 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~--G~~V~~~~r~~   49 (272)
                      +++||+++|.|++.-+|+.+++.|+++  |++|.++.|+.
T Consensus       155 ~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~t  194 (281)
T 2c2x_A          155 SIAGAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGT  194 (281)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTTC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECch
Confidence            689999999999988999999999999  89998876544

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=95.59  E-value=0.15  Score=42.83  Aligned_cols=38  Identities=24%  Similarity=0.365  Sum_probs=33.6

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHH
Q 024145           16 KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGED   54 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~   54 (272)
                      +++.|.|+ |.+|.+++..|++.|++|++.+|+++..+.
T Consensus        16 ~~I~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~   53 (302)
T 1f0y_A           16 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAK   53 (302)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHH
Confidence            57888887 999999999999999999999998876554

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=95.59  E-value=0.19  Score=42.78  Aligned_cols=111  Identities=19%  Similarity=0.150  Sum_probs=66.9

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCC--eEEEeecCcchHHHHHHHhC------CceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           16 KVAIITGGASGIGAMAVELFHENGA--KVVIADVQDKLGEDLADKLG------QDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      .++.|+|+ |.+|.+++..|+..+.  ++++.+.++++.+.....+.      ..+.+. .|  +.           +.+
T Consensus         6 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~-~~--~~-----------~a~   70 (318)
T 1ez4_A            6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIY-SG--EY-----------SDC   70 (318)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEE-EC--CG-----------GGG
T ss_pred             CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEE-EC--CH-----------HHh
Confidence            58999998 9999999999999885  79999998776654333331      122222 22  21           123


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccc
Q 024145           88 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASAC  152 (272)
Q Consensus        88 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~  152 (272)
                      .+.|++|..+|....+ +    .+   -.+.+..|..-...+.+.+..+   .+.+.++++|-..
T Consensus        71 ~~aDvVii~ag~~~~~-g----~~---R~dl~~~n~~i~~~i~~~i~~~---~p~a~iiv~tNPv  124 (318)
T 1ez4_A           71 KDADLVVITAGAPQKP-G----ES---RLDLVNKNLNILSSIVKPVVDS---GFDGIFLVAANPV  124 (318)
T ss_dssp             TTCSEEEECCCC------------------CHHHHHHHHHHHHHHHHHT---TCCSEEEECSSSH
T ss_pred             CCCCEEEECCCCCCCC-C----CC---HHHHHHHHHHHHHHHHHHHHHh---CCCeEEEEeCCcH
Confidence            4789999999875331 1    11   1123455655555555554443   3567788875543

>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}

Probab=95.58  E-value=0.0032  Score=55.69  Aligned_cols=35  Identities=26%  Similarity=0.398  Sum_probs=31.9

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEE-Eeec
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVV-IADV   47 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~-~~~r   47 (272)
                      +++||+++|+| .|.+|..+++.|.+.|++|+ +.++
T Consensus       215 ~l~gk~vaVqG-~GnVG~~~a~~L~~~GakVVavsD~  250 (419)
T 3aoe_E          215 DLRGARVVVQG-LGQVGAAVALHAERLGMRVVAVATS  250 (419)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             CccCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEEEcC
Confidence            68999999999 89999999999999999988 5666

>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}

Probab=95.55  E-value=0.027  Score=46.01  Aligned_cols=41  Identities=17%  Similarity=0.236  Sum_probs=33.2

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcch
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKL   51 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~   51 (272)
                      ..++.++++.|.| .|.+|.++++.|++.|++|++.+|+++.
T Consensus        14 ~~~~~~~kIgiIG-~G~mG~alA~~L~~~G~~V~~~~r~~~~   54 (245)
T 3dtt_A           14 NLYFQGMKIAVLG-TGTVGRTMAGALADLGHEVTIGTRDPKA   54 (245)
T ss_dssp             -----CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHH
T ss_pred             ccccCCCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCChhh
Confidence            4567888898886 8999999999999999999999998775

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=95.54  E-value=0.026  Score=47.19  Aligned_cols=39  Identities=13%  Similarity=0.098  Sum_probs=35.2

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCc
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQD   49 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~   49 (272)
                      .++.||.++|.|++.-+|+.+++.|+..|++|.++.++.
T Consensus       155 i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t  193 (288)
T 1b0a_A          155 IDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT  193 (288)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC
T ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCc
Confidence            468999999999999999999999999999999887554

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=95.54  E-value=0.068  Score=44.58  Aligned_cols=42  Identities=17%  Similarity=0.300  Sum_probs=36.8

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHH
Q 024145           16 KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLAD   57 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~   57 (272)
                      +++.|.|++|.+|.++++.|++.|++|++.+|+++..+.+.+
T Consensus        12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~   53 (286)
T 3c24_A           12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQG   53 (286)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHh
Confidence            479999999999999999999999999999998877665543

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=95.53  E-value=0.095  Score=41.64  Aligned_cols=76  Identities=13%  Similarity=0.153  Sum_probs=51.1

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh-CCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL-GQDVCYIHCDISNEDEVINLVDTAVSKFGK   89 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (272)
                      .++..+++.|.| .|.+|.+++..|++.|++|++.+|+++       .+ ..++.++.+-   ...++.+++++..... 
T Consensus        15 ~~~~~~~I~iiG-~G~mG~~la~~l~~~g~~V~~~~~~~~-------~~~~aD~vi~av~---~~~~~~v~~~l~~~~~-   82 (209)
T 2raf_A           15 LYFQGMEITIFG-KGNMGQAIGHNFEIAGHEVTYYGSKDQ-------ATTLGEIVIMAVP---YPALAALAKQYATQLK-   82 (209)
T ss_dssp             -----CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECTTCC-------CSSCCSEEEECSC---HHHHHHHHHHTHHHHT-
T ss_pred             cccCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHH-------HhccCCEEEEcCC---cHHHHHHHHHHHHhcC-
Confidence            346778899999 799999999999999999999998865       11 2344444332   6677778877766554 


Q ss_pred             ccEEEeCCC
Q 024145           90 LDIMYNNAG   98 (272)
Q Consensus        90 id~lv~~ag   98 (272)
                      =.+++....
T Consensus        83 ~~~vi~~~~   91 (209)
T 2raf_A           83 GKIVVDITN   91 (209)
T ss_dssp             TSEEEECCC
T ss_pred             CCEEEEECC
Confidence            235555544

>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36

Probab=95.51  E-value=0.17  Score=39.78  Aligned_cols=74  Identities=14%  Similarity=0.134  Sum_probs=54.5

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh----------------CCceEEEEecCCCHHHHH
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL----------------GQDVCYIHCDISNEDEVI   77 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----------------~~~~~~~~~D~~~~~~~~   77 (272)
                      .++++|-.|+..|.-   +..|+++|++|+.++.++...+...+..                ..++.++.+|+.+...-.
T Consensus        22 ~~~~vLD~GCG~G~~---~~~la~~g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~   98 (203)
T 1pjz_A           22 PGARVLVPLCGKSQD---MSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARD   98 (203)
T ss_dssp             TTCEEEETTTCCSHH---HHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHH
T ss_pred             CCCEEEEeCCCCcHh---HHHHHHCCCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCccc
Confidence            678999999987743   4567778999999999998887766553                246899999998754210


Q ss_pred             HHHHHHHHHhCCccEEEeCCCC
Q 024145           78 NLVDTAVSKFGKLDIMYNNAGI   99 (272)
Q Consensus        78 ~~~~~~~~~~g~id~lv~~ag~   99 (272)
                               .+.+|.++.+...
T Consensus        99 ---------~~~fD~v~~~~~l  111 (203)
T 1pjz_A           99 ---------IGHCAAFYDRAAM  111 (203)
T ss_dssp             ---------HHSEEEEEEESCG
T ss_pred             ---------CCCEEEEEECcch
Confidence                     1278999876543

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=95.47  E-value=0.54  Score=42.87  Aligned_cols=149  Identities=10%  Similarity=0.019  Sum_probs=90.0

Q ss_pred             CCCCcEEEEeCCCC-hHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHH-HHhCC
Q 024145           12 RLEGKVAIITGGAS-GIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAV-SKFGK   89 (272)
Q Consensus        12 ~l~~k~vlItGas~-giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~g~   89 (272)
                      ...|.+.++....+ +++.+++..|.++|.+|+.+.-...                    .+.++..+.+.+.. ...+.
T Consensus        47 ~~~g~wlv~~~~~~~~~~~~l~~~L~~~G~~v~~v~~~~~--------------------~~~~~~~~~l~~~~~~~~~~  106 (525)
T 3qp9_A           47 GLSGRWLVVVPEDRSAEAAPVLAALSGAGADPVQLDVSPL--------------------GDRQRLAATLGEALAAAGGA  106 (525)
T ss_dssp             CCCSEEEEEEEGGGCTTTHHHHHHHHHTTCEEEEEEECTT--------------------CCHHHHHHHHHHHHHHTTSC
T ss_pred             CCCCeEEEEECCCcchHHHHHHHHHHhcCCeEEEEeCCCC--------------------CCHHHHHHHHHhhhhcccCC
Confidence            34566766665443 2889999999999999876643211                    16666666665332 45567


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHH
Q 024145           90 LDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYG  169 (272)
Q Consensus        90 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a  169 (272)
                      ++.++|..+.............        ...+.+.+.++|++...-   ...++..++....... +....-...+++
T Consensus       107 ~~~v~~l~~~~~~~~~~~~~~~--------~~g~~~~l~l~qal~~~~---~~~~l~~vT~ga~~~~-~~~~~~~p~~a~  174 (525)
T 3qp9_A          107 VDGVLSLLAWDESAHPGHPAPF--------TRGTGATLTLVQALEDAG---VAAPLWCVTHGAVSVG-RADHVTSPAQAM  174 (525)
T ss_dssp             CSEEEECGGGCCCBCTTSCTTC--------BHHHHHHHHHHHHHHHTT---CCSCEEEEEESCCCCB-TTBCCSCHHHHH
T ss_pred             CCeEEEcccCCCCccccccccc--------cchHHHHHHHHHHHHhcC---CCCcEEEEECCCEeCC-CCCCCCCHHHHH
Confidence            8999998876432111111111        123456777888776532   2356777766443221 111234678899


Q ss_pred             HHHHHHHHHHHhcCCCcEEEEEe
Q 024145          170 ILGLVKCLAAELGQYGIRVNCVS  192 (272)
Q Consensus       170 ~~~~~~~la~e~~~~gi~v~~i~  192 (272)
                      +-+|+|+++.|+...-.+...+.
T Consensus       175 l~Gl~r~~~~E~p~~~~~~vDl~  197 (525)
T 3qp9_A          175 VWGMGRVAALEHPERWGGLIDLP  197 (525)
T ss_dssp             HHHHHHHHHHHSTTTEEEEEEEC
T ss_pred             HHHHHHHHHHhCCCceEEEEEcC
Confidence            99999999999865333444443

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=95.46  E-value=0.052  Score=46.94  Aligned_cols=73  Identities=21%  Similarity=0.268  Sum_probs=51.5

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGK   89 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (272)
                      ..++.||++.|.| .|.||+++++.|...|++|+..+|++...+.. ++.+.  ..  +  .+   +++++.       .
T Consensus       159 ~~~l~gktvGIIG-~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~-~~~g~--~~--~--~~---l~ell~-------~  220 (351)
T 3jtm_A          159 AYDLEGKTIGTVG-AGRIGKLLLQRLKPFGCNLLYHDRLQMAPELE-KETGA--KF--V--ED---LNEMLP-------K  220 (351)
T ss_dssp             CCCSTTCEEEEEC-CSHHHHHHHHHHGGGCCEEEEECSSCCCHHHH-HHHCC--EE--C--SC---HHHHGG-------G
T ss_pred             cccccCCEEeEEE-eCHHHHHHHHHHHHCCCEEEEeCCCccCHHHH-HhCCC--eE--c--CC---HHHHHh-------c
Confidence            3578999999998 58999999999999999999999876544333 33332  11  1  22   233333       5


Q ss_pred             ccEEEeCCCCC
Q 024145           90 LDIMYNNAGIL  100 (272)
Q Consensus        90 id~lv~~ag~~  100 (272)
                      .|+|+.+....
T Consensus       221 aDvV~l~~Plt  231 (351)
T 3jtm_A          221 CDVIVINMPLT  231 (351)
T ss_dssp             CSEEEECSCCC
T ss_pred             CCEEEECCCCC
Confidence            79999988654

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=95.44  E-value=0.014  Score=62.89  Aligned_cols=78  Identities=15%  Similarity=0.308  Sum_probs=53.4

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHH---hCCceEEEEecCCCHHHHHHHHHHHHHHh--C
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADK---LGQDVCYIHCDISNEDEVINLVDTAVSKF--G   88 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g   88 (272)
                      .|.+|||.||+||+|.+.++.....|++|+++++++++.+.+.+.   ++... +  .|-.+.+-    .+++.+..  .
T Consensus      1667 ~Ge~VLI~gaaGgVG~aAiqlAk~~Ga~Viat~~s~~k~~~l~~~~~~lga~~-v--~~~~~~~~----~~~i~~~t~g~ 1739 (2512)
T 2vz8_A         1667 PGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFPQLDETC-F--ANSRDTSF----EQHVLRHTAGK 1739 (2512)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTCCSTT-E--EESSSSHH----HHHHHHTTTSC
T ss_pred             CCCEEEEEeCChHHHHHHHHHHHHcCCEEEEEeCChhhhHHHHhhcCCCCceE-E--ecCCCHHH----HHHHHHhcCCC
Confidence            678999999999999999888888899999999887776655553   33221 1  23333322    33343322  2


Q ss_pred             CccEEEeCCC
Q 024145           89 KLDIMYNNAG   98 (272)
Q Consensus        89 ~id~lv~~ag   98 (272)
                      ++|+++++.+
T Consensus      1740 GvDvVld~~g 1749 (2512)
T 2vz8_A         1740 GVDLVLNSLA 1749 (2512)
T ss_dssp             CEEEEEECCC
T ss_pred             CceEEEECCC
Confidence            5899988765

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=95.40  E-value=0.027  Score=47.42  Aligned_cols=38  Identities=24%  Similarity=0.342  Sum_probs=34.5

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecC
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQ   48 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~   48 (272)
                      .++.||.++|.|++.-+|+.+++.|+..|++|.++.++
T Consensus       161 i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~  198 (301)
T 1a4i_A          161 VPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSK  198 (301)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECC
Confidence            36899999999999999999999999999999888654

>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}

Probab=95.40  E-value=0.094  Score=45.40  Aligned_cols=36  Identities=22%  Similarity=0.382  Sum_probs=25.0

Q ss_pred             CCcEEEEeCCCC-hH--HHHHHHHHHHcCCeEEEeecCc
Q 024145           14 EGKVAIITGGAS-GI--GAMAVELFHENGAKVVIADVQD   49 (272)
Q Consensus        14 ~~k~vlItGas~-gi--G~aia~~la~~G~~V~~~~r~~   49 (272)
                      ++|.++.+|||| .|  +.+++++|.++|++|..++...
T Consensus         2 ~~~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~   40 (365)
T 3s2u_A            2 KGNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPR   40 (365)
T ss_dssp             -CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSS
T ss_pred             CCcEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCc
Confidence            455555556664 34  6899999999999997766443

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=95.37  E-value=0.32  Score=41.33  Aligned_cols=109  Identities=16%  Similarity=0.156  Sum_probs=66.2

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCC--eEEEeecCcchHHHHHHHhC------CceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145           17 VAIITGGASGIGAMAVELFHENGA--KVVIADVQDKLGEDLADKLG------QDVCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      ++.|.|+ |.+|.+++..|++.|.  +|++.+++++..+.....+.      ....+. .  ++.+.           ..
T Consensus         2 kI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~-~--~d~~~-----------~~   66 (319)
T 1a5z_A            2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIY-A--GDYAD-----------LK   66 (319)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEE-E--CCGGG-----------GT
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEE-e--CCHHH-----------hC
Confidence            5789998 9999999999999998  99999998876665443221      011111 1  23221           23


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecc
Q 024145           89 KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASA  151 (272)
Q Consensus        89 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~  151 (272)
                      ..|++|.+++....+     ..+..   +.+..|..-...+++.+.++.   +.+.+|.+|-.
T Consensus        67 ~aDvViiav~~~~~~-----g~~r~---dl~~~n~~i~~~i~~~i~~~~---~~~~ii~~tNp  118 (319)
T 1a5z_A           67 GSDVVIVAAGVPQKP-----GETRL---QLLGRNARVMKEIARNVSKYA---PDSIVIVVTNP  118 (319)
T ss_dssp             TCSEEEECCCCCCCS-----SCCHH---HHHHHHHHHHHHHHHHHHHHC---TTCEEEECSSS
T ss_pred             CCCEEEEccCCCCCC-----CCCHH---HHHHHHHHHHHHHHHHHHhhC---CCeEEEEeCCc
Confidence            689999999864321     11221   234555555555555555542   45666666443

>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5

Probab=95.36  E-value=0.021  Score=47.65  Aligned_cols=68  Identities=26%  Similarity=0.365  Sum_probs=52.2

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDI   92 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   92 (272)
                      .+|+++|.| +||.|++++.+|++.|+ +|.++.|+.++.+++.+.++..  + .-++          .     ....|+
T Consensus       118 ~~~~vlvlG-aGgaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~~~--~-~~~~----------~-----~~~~Di  178 (271)
T 1npy_A          118 KNAKVIVHG-SGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYA--Y-INSL----------E-----NQQADI  178 (271)
T ss_dssp             TTSCEEEEC-SSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCE--E-ESCC----------T-----TCCCSE
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCc--c-chhh----------h-----cccCCE
Confidence            568899999 58999999999999997 7999999998888888777531  1 1011          0     126899


Q ss_pred             EEeCCCCC
Q 024145           93 MYNNAGIL  100 (272)
Q Consensus        93 lv~~ag~~  100 (272)
                      ||++....
T Consensus       179 vInaTp~g  186 (271)
T 1npy_A          179 LVNVTSIG  186 (271)
T ss_dssp             EEECSSTT
T ss_pred             EEECCCCC
Confidence            99988754

>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A

Probab=95.36  E-value=0.025  Score=48.20  Aligned_cols=72  Identities=18%  Similarity=0.078  Sum_probs=52.2

Q ss_pred             cCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145            9 PFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      ...++.||++.|.| .|.||+++++.|...|++|+..+|+++..+        .+...    ...+++++++.       
T Consensus       133 ~~~~l~g~tvGIiG-~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~--------~~~~~----~~~~~l~ell~-------  192 (315)
T 3pp8_A          133 PEYTREEFSVGIMG-AGVLGAKVAESLQAWGFPLRCWSRSRKSWP--------GVESY----VGREELRAFLN-------  192 (315)
T ss_dssp             CCCCSTTCCEEEEC-CSHHHHHHHHHHHTTTCCEEEEESSCCCCT--------TCEEE----ESHHHHHHHHH-------
T ss_pred             CCCCcCCCEEEEEe-eCHHHHHHHHHHHHCCCEEEEEcCCchhhh--------hhhhh----cccCCHHHHHh-------
Confidence            45678999999998 589999999999999999999998765321        11111    11245555544       


Q ss_pred             CccEEEeCCCCC
Q 024145           89 KLDIMYNNAGIL  100 (272)
Q Consensus        89 ~id~lv~~ag~~  100 (272)
                      ..|+|+.+....
T Consensus       193 ~aDiV~l~~Plt  204 (315)
T 3pp8_A          193 QTRVLINLLPNT  204 (315)
T ss_dssp             TCSEEEECCCCC
T ss_pred             hCCEEEEecCCc
Confidence            679999887643

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=95.35  E-value=0.088  Score=43.93  Aligned_cols=82  Identities=11%  Similarity=0.061  Sum_probs=55.5

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh----------CCceEEEEecCCCHHHHHHHH---HH
Q 024145           16 KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL----------GQDVCYIHCDISNEDEVINLV---DT   82 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~~---~~   82 (272)
                      +++.|.| .|.+|.++++.|++.|++|++.+|+++..+.+.+.-          -....++-.=+.++..++.++   +.
T Consensus         2 ~~i~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~   80 (287)
T 3pef_A            2 QKFGFIG-LGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVVESCPVTFAMLADPAAAEEVCFGKHG   80 (287)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTC
T ss_pred             CEEEEEe-ecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEcCCHHHHHHHHcCcch
Confidence            4677887 599999999999999999999999988776665320          011233444445566777776   66


Q ss_pred             HHHHhCCccEEEeCCC
Q 024145           83 AVSKFGKLDIMYNNAG   98 (272)
Q Consensus        83 ~~~~~g~id~lv~~ag   98 (272)
                      +.....+=.++|+..+
T Consensus        81 l~~~l~~~~~vi~~st   96 (287)
T 3pef_A           81 VLEGIGEGRGYVDMST   96 (287)
T ss_dssp             HHHHCCTTCEEEECSC
T ss_pred             HhhcCCCCCEEEeCCC
Confidence            6555433456666643

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=95.33  E-value=0.14  Score=43.39  Aligned_cols=72  Identities=18%  Similarity=0.213  Sum_probs=47.7

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHHHHHHHhCC-------ceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           16 KVAIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGEDLADKLGQ-------DVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      +++.|+|+ |.+|..++..|+..|. +|++.+++++..+.....+..       .......  +|.+           .+
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~~-----------a~   68 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT--NNYA-----------DT   68 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCGG-----------GG
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEEC--CCHH-----------HH
Confidence            47899998 9999999999999996 899999988766543332211       1111110  1211           12


Q ss_pred             CCccEEEeCCCCCC
Q 024145           88 GKLDIMYNNAGILD  101 (272)
Q Consensus        88 g~id~lv~~ag~~~  101 (272)
                      .+.|++|..+|...
T Consensus        69 ~~aD~Vi~a~g~p~   82 (309)
T 1ur5_A           69 ANSDVIVVTSGAPR   82 (309)
T ss_dssp             TTCSEEEECCCC--
T ss_pred             CCCCEEEEcCCCCC
Confidence            37899999998753

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=95.31  E-value=0.072  Score=45.18  Aligned_cols=70  Identities=20%  Similarity=0.265  Sum_probs=50.7

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      .++.||++.|.| .|.||+++++.|...|++|+..+|+.+. + ...+.+.  ..     .+.   ++++.       ..
T Consensus       138 ~~l~g~~vgIiG-~G~IG~~~A~~l~~~G~~V~~~d~~~~~-~-~~~~~g~--~~-----~~l---~ell~-------~a  197 (307)
T 1wwk_A          138 IELEGKTIGIIG-FGRIGYQVAKIANALGMNILLYDPYPNE-E-RAKEVNG--KF-----VDL---ETLLK-------ES  197 (307)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCH-H-HHHHTTC--EE-----CCH---HHHHH-------HC
T ss_pred             cccCCceEEEEc-cCHHHHHHHHHHHHCCCEEEEECCCCCh-h-hHhhcCc--cc-----cCH---HHHHh-------hC
Confidence            578999999997 5999999999999999999999988765 2 2333332  11     132   33333       46


Q ss_pred             cEEEeCCCCC
Q 024145           91 DIMYNNAGIL  100 (272)
Q Consensus        91 d~lv~~ag~~  100 (272)
                      |+|+.+....
T Consensus       198 DvV~l~~p~~  207 (307)
T 1wwk_A          198 DVVTIHVPLV  207 (307)
T ss_dssp             SEEEECCCCS
T ss_pred             CEEEEecCCC
Confidence            9999887643

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	272
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	2e-73
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	1e-72
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	7e-72
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	5e-67
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	9e-66
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	2e-65
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	5e-65
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	6e-64
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	1e-63
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	2e-62
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	1e-61
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	1e-61
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	3e-61
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	5e-61
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	7e-61
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	2e-60
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	2e-60
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	1e-59
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	1e-59
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	2e-59
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	1e-58
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	2e-58
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	6e-58
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	3e-57
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	4e-57
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	4e-57
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	5e-57
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	6e-57
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	2e-56
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	2e-56
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	9e-56
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	1e-55
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	2e-55
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	4e-55
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	7e-55
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	1e-54
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	4e-54
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	5e-54
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	6e-53
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	3e-50
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	3e-50
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	3e-50
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	6e-50
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	4e-49
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	3e-47
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	3e-47
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	7e-47
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	3e-45
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	1e-44
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	3e-41
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	1e-40
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	6e-39
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	7e-39
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	8e-38
d2pd4a1	274	c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte	8e-38
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	2e-35
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	2e-35
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	4e-34
d2h7ma1	268	c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri	4e-34
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	3e-32
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	1e-30
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	2e-29
d1uh5a_	329	c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite	1e-27
d1d7oa_	297	c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B	7e-26
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	6e-24
d1luaa1	191	c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter	2e-15
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	5e-15
d1jaya_	212	c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase	7e-14
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	4e-08
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	4e-06
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	5e-06
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	9e-06
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	1e-05
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	2e-05
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	2e-05
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	1e-04
d1i24a_	393	c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1	1e-04
d2blla1	342	c.2.1.2 (A:316-657) Polymyxin resistance protein A	4e-04
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	4e-04
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	8e-04
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	9e-04
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	0.001
d2gv8a1	335	c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monox	0.002
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	0.002
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	0.003

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score =  223 bits (570), Expect = 2e-73
 Identities = 127/260 (48%), Positives = 173/260 (66%), Gaps = 4/260 (1%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQD--VCYIHCD 69
           RL+ KVAIITGGA GIG    +LF   GAKVVIAD+ D  G+ + + +G    + ++HCD
Sbjct: 3   RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCD 62

Query: 70  ISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLG 129
           ++ +++V NLVDT ++K GKLDIM+ N G+L  +  SIL+    D +R++++N  G FL 
Sbjct: 63  VTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLV 122

Query: 130 AKHAARVMVPQQKGCILFTASACTEIAGLGSPA-YTISKYGILGLVKCLAAELGQYGIRV 188
           AKHAARVM+P +KG I+FTAS  +  AG G    YT +K+ +LGL   L  ELG+YGIRV
Sbjct: 123 AKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIRV 182

Query: 189 NCVSPYGLATGMSMKG-GVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVS 247
           NCVSPY +A+ +     GVD + +E    Q  NLKG  L+ + +A+A  YLA DES YVS
Sbjct: 183 NCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDESKYVS 242

Query: 248 GQNLVVDGGFSVVNPTVMRA 267
           G NLV+DGG++  NP    A
Sbjct: 243 GLNLVIDGGYTRTNPAFPTA 262

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score =  220 bits (563), Expect = 1e-72
 Identities = 77/250 (30%), Positives = 123/250 (49%), Gaps = 9/250 (3%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDIS 71
              GK  ++TGGA GIG    + F   GA V + D++ + G+++A+ +G    +   D+ 
Sbjct: 2   LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPE-GKEVAEAIG--GAFFQVDLE 58

Query: 72  NEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAK 131
           +E E +  V+ A    G++D++ NNA I     GS L     +  R++ VN       + 
Sbjct: 59  DERERVRFVEEAAYALGRVDVLVNNAAIAAP--GSALTVRLPEWRRVLEVNLTAPMHLSA 116

Query: 132 HAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCV 191
            AAR M     G I+  AS     A   + AY  SK G++ L + LA +L    IRVN V
Sbjct: 117 LAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAV 176

Query: 192 SPYGLATGM---SMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSG 248
           +P  +AT     ++    DP         +  L     K + +A A L+LAS+++S+++G
Sbjct: 177 APGAIATEAVLEAIALSPDPERTRRDWEDLHAL-RRLGKPEEVAEAVLFLASEKASFITG 235

Query: 249 QNLVVDGGFS 258
             L VDGG +
Sbjct: 236 AILPVDGGMT 245

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score =  218 bits (558), Expect = 7e-72
 Identities = 75/247 (30%), Positives = 113/247 (45%), Gaps = 5/247 (2%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADV-QDKLGEDLADKLGQDVCYIHCDI 70
           RL+ K+A+ITGGA+GIG    E F   GA + IAD+      E     LG+ V  + CD+
Sbjct: 2   RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDV 61

Query: 71  SNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGA 130
           S   +V       +S FG+ DI+ NNAGI         +      ++   +N   GFL A
Sbjct: 62  SQPGDVEAFGKQVISTFGRCDILVNNAGIYPL--IPFDELTFEQWKKTFEINVDSGFLMA 119

Query: 131 KHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNC 190
           K     M     G I+   S    +       Y  +K   +G  + LA++LG+ GI VN 
Sbjct: 120 KAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGITVNA 179

Query: 191 VSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQN 250
           ++P  + T  +    +        +  M            +  AA +LASD++S+++GQ 
Sbjct: 180 IAPSLVRTATTEASALSAM--FDVLPNMLQAIPRLQVPLDLTGAAAFLASDDASFITGQT 237

Query: 251 LVVDGGF 257
           L VDGG 
Sbjct: 238 LAVDGGM 244

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  207 bits (527), Expect = 5e-67
 Identities = 79/263 (30%), Positives = 119/263 (45%), Gaps = 14/263 (5%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL------GQDVCY 65
           R   KVAIITG ++GIG     LF   GAKV I     +  E+   ++       Q+V  
Sbjct: 2   RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNS 61

Query: 66  IHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGI--LDRSFGSILDTPKSDLERLINVNT 123
           +  D++ +     ++ T + KFGKLDI+ NNAG    D    +         +  +N+N 
Sbjct: 62  VVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNL 121

Query: 124 IGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQ 183
                  K A   +   +   +  ++ A    A    P Y+I+K  I    +  A +L Q
Sbjct: 122 RSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQ 181

Query: 184 YGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLK-----GEFLKTDGIANAALYL 238
           +GIRVN +SP  +ATG     G+     +   S M  +K     G   +   IA    +L
Sbjct: 182 HGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAFL 241

Query: 239 ASDE-SSYVSGQNLVVDGGFSVV 260
           A  + SSY+ G  LVVDGG S++
Sbjct: 242 ADRKTSSYIIGHQLVVDGGSSLI 264

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score =  203 bits (518), Expect = 9e-66
 Identities = 80/251 (31%), Positives = 125/251 (49%), Gaps = 8/251 (3%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDIS 71
           RL+GKVA++TGGASG+G   V+L    GAKV  +D+ +  G+ LA +LG+   ++  D+S
Sbjct: 3   RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVS 62

Query: 72  NEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAK 131
           +E +   ++     + G L+++ NNAGIL    G +      D  RL+ +NT   F+G +
Sbjct: 63  SEADWTLVMAAVQRRLGTLNVLVNNAGILLP--GDMETGRLEDFSRLLKINTESVFIGCQ 120

Query: 132 HAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQ--YGIRVN 189
                M  +  G I+  AS  + +       Y+ SK  +  L +  A    +  Y IRVN
Sbjct: 121 QGIAAM-KETGGSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVN 179

Query: 190 CVSPYGLATGMSMKGGVDPALIESSMSQMGNLK--GEFLKTDGIANAALYLASDESSYVS 247
            + P G+ T M M+  +   + +  +     L   G     + IA   L+LASDESS +S
Sbjct: 180 SIHPDGIYTPM-MQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDESSVMS 238

Query: 248 GQNLVVDGGFS 258
           G  L  D    
Sbjct: 239 GSELHADNSIL 249

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  202 bits (515), Expect = 2e-65
 Identities = 73/250 (29%), Positives = 124/250 (49%), Gaps = 6/250 (2%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDIS 71
           R  GKV ++TGG  GIGA  V  F  +GA+VVI D  +  G  L  +L     +I CD++
Sbjct: 3   RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP-GAVFILCDVT 61

Query: 72  NEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAK 131
            ED+V  LV   + +FG+LD + NNAG          +T      +L+ +N +G +   K
Sbjct: 62  QEDDVKTLVSETIRRFGRLDCVVNNAGHHPPP-QRPEETSAQGFRQLLELNLLGTYTLTK 120

Query: 132 HAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCV 191
            A   +  + +G ++  +S    I    +  Y  +K  +  + K LA +   YG+RVNC+
Sbjct: 121 LALPYLR-KSQGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCI 179

Query: 192 SPYGLATGMSMKGGVDPALIESSMSQMGNLK--GEFLKTDGIANAALYLASDESSYVSGQ 249
           SP  + T +  +         +S+ +    +  G   +   +  AA++LAS+ +++ +G 
Sbjct: 180 SPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLASE-ANFCTGI 238

Query: 250 NLVVDGGFSV 259
            L+V GG  +
Sbjct: 239 ELLVTGGAEL 248

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score =  201 bits (513), Expect = 5e-65
 Identities = 92/252 (36%), Positives = 127/252 (50%), Gaps = 6/252 (2%)

Query: 13  LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISN 72
           L GK  IITGGA G+GA A       GA+VV+ADV D+ G   A +LG    Y H D++ 
Sbjct: 3   LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTI 62

Query: 73  EDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKH 132
           E++   +V  A  +FG +D + NNAGI    F  +         +++ +N  G F+G K 
Sbjct: 63  EEDWQRVVAYAREEFGSVDGLVNNAGISTGMF--LETESVERFRKVVEINLTGVFIGMKT 120

Query: 133 AARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVS 192
               M     G I+  +SA   +    + +Y  SK+G+ GL K  A ELG   IRVN V 
Sbjct: 121 VIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVH 180

Query: 193 PYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLV 252
           P    T M+ + G+         + MG +  E      IA A + L SD SSYV+G  L 
Sbjct: 181 PGMTYTPMTAETGIRQGEGNYPNTPMGRVGNE---PGEIAGAVVKLLSDTSSYVTGAELA 237

Query: 253 VDGGFSVVNPTV 264
           VDGG++   PTV
Sbjct: 238 VDGGWT-TGPTV 248

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  199 bits (507), Expect = 6e-64
 Identities = 69/263 (26%), Positives = 115/263 (43%), Gaps = 14/263 (5%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL------GQDVCY 65
           R   K  IITG ++GIG     LF + GA V I     +  E+    +       + V  
Sbjct: 2   RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNS 61

Query: 66  IHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRS--FGSILDTPKSDLERLINVNT 123
           +  D++ ED    ++++ + +FGK+D++ NNAG         +  D       + + +N 
Sbjct: 62  VVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNL 121

Query: 124 IGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQ 183
                  K     +V  +   +  ++      A      Y I+K  +    +  A +L +
Sbjct: 122 QAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLAK 181

Query: 184 YGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLK-----GEFLKTDGIANAALYL 238
           +GIRVN VSP  + TG +   G+     +   + M + K     G   K + IAN  L+L
Sbjct: 182 FGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIILFL 241

Query: 239 ASDE-SSYVSGQNLVVDGGFSVV 260
           A    S Y+ GQ++V DGG S+V
Sbjct: 242 ADRNLSFYILGQSIVADGGTSLV 264

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  199 bits (506), Expect = 1e-63
 Identities = 72/261 (27%), Positives = 125/261 (47%), Gaps = 12/261 (4%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL------GQDVCY 65
           R  GK  IITG ++GIG  A  +F + GA+V I    +   E+   ++       + +  
Sbjct: 1   RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINA 60

Query: 66  IHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIG 125
           +  D++      ++++T ++KFGK+DI+ NNAG       +  D P    ++   +N   
Sbjct: 61  VVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQA 120

Query: 126 GFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYG 185
                +     ++  +   +  ++      A  G P Y  +K  +    +C A +L Q+G
Sbjct: 121 VIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQHG 180

Query: 186 IRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLK-----GEFLKTDGIANAALYLAS 240
           +RVN VSP  +ATG     G+     +   S +G+ K     G   K + IAN  ++LA 
Sbjct: 181 VRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLAD 240

Query: 241 -DESSYVSGQNLVVDGGFSVV 260
            + SSY+ GQ++V DGG ++V
Sbjct: 241 RNLSSYIIGQSIVADGGSTLV 261

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score =  194 bits (495), Expect = 2e-62
 Identities = 82/253 (32%), Positives = 122/253 (48%), Gaps = 12/253 (4%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQ--DVCYIHCD 69
           RL+GKVAIITGG  GIG      F E GAKV+I      +GE  A  +G    + +   D
Sbjct: 3   RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHD 62

Query: 70  ISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLG 129
            S+ED    L D     FG +  + NNAGI      S+ +T  ++  +L+ VN  G F G
Sbjct: 63  SSDEDGWTKLFDATEKAFGPVSTLVNNAGI--AVNKSVEETTTAEWRKLLAVNLDGVFFG 120

Query: 130 AKHAARVMVPQQKG-CILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAE--LGQYGI 186
            +   + M  +  G  I+  +S    +      AY  SK  +  + K  A +  L  Y +
Sbjct: 121 TRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDV 180

Query: 187 RVNCVSPYGLATGMSMK-GGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSY 245
           RVN V P  + T +     G + A+ + + + M    G   + + IA   +YLAS+ES +
Sbjct: 181 RVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPM----GHIGEPNDIAYICVYLASNESKF 236

Query: 246 VSGQNLVVDGGFS 258
            +G   VVDGG++
Sbjct: 237 ATGSEFVVDGGYT 249

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  193 bits (491), Expect = 1e-61
 Identities = 70/251 (27%), Positives = 111/251 (44%), Gaps = 9/251 (3%)

Query: 13  LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCD 69
           L+ K  ++TGG  GIG   VE F   GA +      +    +   K    G  V    CD
Sbjct: 6   LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCD 65

Query: 70  ISNEDEVINLVDTAVSKF-GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFL 128
            S   E   L+ T  S F GKLDI+ NN G +       LD    D    I+ N    + 
Sbjct: 66  ASLRPEREKLMQTVSSMFGGKLDILINNLGAIRS--KPTLDYTAEDFSFHISTNLESAYH 123

Query: 129 GAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRV 188
            ++ A  ++     G I+F +S    ++      Y+ +K  +  L + LA E    GIR 
Sbjct: 124 LSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGIRA 183

Query: 189 NCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSG 248
           N V+P  +AT +  +   D    +  +S+     G F + + +++   +L    +SY++G
Sbjct: 184 NAVAPAVIATPL-AEAVYDDEFKKVVISR--KPLGRFGEPEEVSSLVAFLCMPAASYITG 240

Query: 249 QNLVVDGGFSV 259
           Q + VDGG +V
Sbjct: 241 QTICVDGGLTV 251

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  192 bits (489), Expect = 1e-61
 Identities = 67/247 (27%), Positives = 112/247 (45%), Gaps = 10/247 (4%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDIS 71
              G  A++TG   GIG   V+  H +GAKVV     +     LA +    +  +  D+ 
Sbjct: 2   NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECP-GIEPVCVDLG 60

Query: 72  NEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAK 131
           + D      + A+   G +D++ NNA ++       L+  K   +R  +VN    F  ++
Sbjct: 61  DWDA----TEKALGGIGPVDLLVNNAALVIM--QPFLEVTKEAFDRSFSVNLRSVFQVSQ 114

Query: 132 HAARVMVPQQK-GCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNC 190
             AR M+ +   G I+  +S    +       Y+ +K  +  L K +A ELG + IRVN 
Sbjct: 115 MVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNS 174

Query: 191 VSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQN 250
           V+P  + T M  K   DP        +      +F + + + N+ L+L SD S+  SG  
Sbjct: 175 VNPTVVLTDMGKKVSADPEFARKLKERH--PLRKFAEVEDVVNSILFLLSDRSASTSGGG 232

Query: 251 LVVDGGF 257
           ++VD G+
Sbjct: 233 ILVDAGY 239

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  191 bits (487), Expect = 3e-61
 Identities = 88/247 (35%), Positives = 135/247 (54%), Gaps = 11/247 (4%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDIS 71
           RL GKVA+++GGA G+GA  V      GAKVV  D+ D+ G+ +A +L     Y+H D++
Sbjct: 3   RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVT 62

Query: 72  NEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAK 131
              +    VDTAV+ FG L ++ NNAGI   + G+I D   ++ +R+++VN  G FLG +
Sbjct: 63  QPAQWKAAVDTAVTAFGGLHVLVNNAGI--LNIGTIEDYALTEWQRILDVNLTGVFLGIR 120

Query: 132 HAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCV 191
              + M    +G I+  +S       +    YT +K+ + GL K  A ELG  GIRVN +
Sbjct: 121 AVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSI 180

Query: 192 SPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNL 251
            P  + T M+    V   + ++++ +         +   ++N  +YLASDESSY +G   
Sbjct: 181 HPGLVKTPMT--DWVPEDIFQTALGRAA-------EPVEVSNLVVYLASDESSYSTGAEF 231

Query: 252 VVDGGFS 258
           VVDGG  
Sbjct: 232 VVDGGTV 238

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score =  191 bits (487), Expect = 5e-61
 Identities = 70/251 (27%), Positives = 110/251 (43%), Gaps = 7/251 (2%)

Query: 13  LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVC---YIHCD 69
           LEG  A++TGG+ GIG   VE     GA V       K   D   +            CD
Sbjct: 6   LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCD 65

Query: 70  ISNEDEVINLVDTAVSKF-GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFL 128
           +S+  E   L++T  + F GKL+I+ NNAGI+   +    D    D   ++++N    + 
Sbjct: 66  LSSRSERQELMNTVANHFHGKLNILVNNAGIVI--YKEAKDYTVEDYSLIMSINFEAAYH 123

Query: 129 GAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRV 188
            +  A   +   ++G ++F +S    +A      Y  +K  +  L +CLA E  +  IRV
Sbjct: 124 LSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRV 183

Query: 189 NCVSPYGLATGMSMKGGVDPALIESSMSQMGNLK-GEFLKTDGIANAALYLASDESSYVS 247
           N V P  +AT +      DP   E+    +         +   +A    +L    +SYV+
Sbjct: 184 NGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAASYVT 243

Query: 248 GQNLVVDGGFS 258
           GQ + VDGG  
Sbjct: 244 GQIIYVDGGLM 254

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score =  190 bits (484), Expect = 7e-61
 Identities = 87/248 (35%), Positives = 134/248 (54%), Gaps = 9/248 (3%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDIS 71
           RL+ K  +ITG A GIG   +ELF + GA++V  D+++    + A+ +G     +  D++
Sbjct: 2   RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAH--PVVMDVA 59

Query: 72  NEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAK 131
           +   V      A++  G+LD + + AGI           P  D E ++ VN  G FL AK
Sbjct: 60  DPASVERGFAEALAHLGRLDGVVHYAGITR--DNFHWKMPLEDWELVLRVNLTGSFLVAK 117

Query: 132 HAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCV 191
            A+  M  +  G I+ TAS    +  LG   Y  S  G++GL + LA ELG++GIRVN +
Sbjct: 118 AASEAMREKNPGSIVLTASRVY-LGNLGQANYAASMAGVVGLTRTLALELGRWGIRVNTL 176

Query: 192 SPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNL 251
           +P  + T M+ K  V   + E +++      G   K   +A AAL+L SDESS+++GQ L
Sbjct: 177 APGFIETRMTAK--VPEKVREKAIAA--TPLGRAGKPLEVAYAALFLLSDESSFITGQVL 232

Query: 252 VVDGGFSV 259
            VDGG ++
Sbjct: 233 FVDGGRTI 240

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score =  189 bits (482), Expect = 2e-60
 Identities = 84/248 (33%), Positives = 120/248 (48%), Gaps = 9/248 (3%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHC 68
           RL+GK AIITG  +GIG      F   GA VV++D+       + D++   G       C
Sbjct: 8   RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRC 67

Query: 69  DISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFL 128
           DI++E E+  L D A+SK GK+DI+ NNAG          D P +D  R   +N    F 
Sbjct: 68  DITSEQELSALADFAISKLGKVDILVNNAGG---GGPKPFDMPMADFRRAYELNVFSFFH 124

Query: 129 GAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRV 188
            ++  A  M     G IL   S   E   +   +Y  SK     LV+ +A +LG+  IRV
Sbjct: 125 LSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRV 184

Query: 189 NCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSG 248
           N ++P  + T   +K  + P + +  +           +   IANAAL+L S  +S+VSG
Sbjct: 185 NGIAPGAILTDA-LKSVITPEIEQKMLQH--TPIRRLGQPQDIANAALFLCSPAASWVSG 241

Query: 249 QNLVVDGG 256
           Q L V GG
Sbjct: 242 QILTVSGG 249

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  191 bits (485), Expect = 2e-60
 Identities = 72/262 (27%), Positives = 121/262 (46%), Gaps = 15/262 (5%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL--------GQDV 63
            L+G+VAI+TGGA+GIG   V+   E G+ VVIA  + +  +  AD+L           V
Sbjct: 9   LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARV 68

Query: 64  CYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNT 123
             I C+I NE+EV NLV + +  FGK++ + NN G                   ++  N 
Sbjct: 69  IPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQF--LSPAEHISSKGWHAVLETNL 126

Query: 124 IGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQ 183
            G F   K      + +  G I+           L   +   ++ G+  L K LA E   
Sbjct: 127 TGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFPLAVHSGA-ARAGVYNLTKSLALEWAC 185

Query: 184 YGIRVNCVSPYGLATGMSMK--GGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASD 241
            GIR+NCV+P  + +  +++  G    +  E S  ++          + +++   +L S 
Sbjct: 186 SGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKI--PAKRIGVPEEVSSVVCFLLSP 243

Query: 242 ESSYVSGQNLVVDGGFSVVNPT 263
            +S+++GQ++ VDGG S+   +
Sbjct: 244 AASFITGQSVDVDGGRSLYTHS 265

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  188 bits (478), Expect = 1e-59
 Identities = 63/258 (24%), Positives = 111/258 (43%), Gaps = 19/258 (7%)

Query: 11  KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQ-----DVCY 65
           +R   ++A++TG + GIGA       + G KVV         E+LA +         +  
Sbjct: 6   ERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIP 65

Query: 66  IHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIG 125
             CD+SNE++++++     S+   +DI  NNAG+      ++L    S  + + NVN + 
Sbjct: 66  YRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLAR--PDTLLSGSTSGWKDMFNVNVLA 123

Query: 126 GFLGAKHAARVMVPQ--QKGCILFTAS--ACTEIAGLGSPAYTISKYGILGLVKCLAAEL 181
             +  + A + M  +    G I+   S      +    +  Y+ +KY +  L + L  EL
Sbjct: 124 LSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQEL 183

Query: 182 --GQYGIRVNCVSPYGLATGMSMK-GGVDPALIESSMSQMGNLKGEFLKTDGIANAALYL 238
              Q  IR  C+SP  + T  + K    DP    ++  Q      + LK + +A A +Y+
Sbjct: 184 REAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATYEQ-----MKCLKPEDVAEAVIYV 238

Query: 239 ASDESSYVSGQNLVVDGG 256
            S  +    G   +   G
Sbjct: 239 LSTPAHIQIGDIQMRPTG 256

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score =  187 bits (477), Expect = 1e-59
 Identities = 79/251 (31%), Positives = 125/251 (49%), Gaps = 9/251 (3%)

Query: 13  LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL----GQDVCYIHC 68
           L G+VA++TGG+ G+G    +   E G  VV+A    +   + A KL    G +     C
Sbjct: 3   LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRC 62

Query: 69  DISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIG-GF 127
           D+SN +EV  L++    KFGKLD + N AGI  R      + P  +  ++I VN  G  +
Sbjct: 63  DVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRR--HPAEEFPLDEFRQVIEVNLFGTYY 120

Query: 128 LGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIR 187
           +  +  + +        I   +    E+      AY  SK G+  L K LA E G+YGIR
Sbjct: 121 VCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYGIR 180

Query: 188 VNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVS 247
           VN ++P    T M+     DP  ++  + ++    G     + +   A++LAS+E+ YV+
Sbjct: 181 VNVIAPGWYRTKMTEAVFSDPEKLDYMLKRI--PLGRTGVPEDLKGVAVFLASEEAKYVT 238

Query: 248 GQNLVVDGGFS 258
           GQ + VDGG++
Sbjct: 239 GQIIFVDGGWT 249

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  189 bits (480), Expect = 2e-59
 Identities = 64/255 (25%), Positives = 105/255 (41%), Gaps = 26/255 (10%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLG---------EDLADKLGQD 62
           R +G+V ++TG   G+G      F E GA VV+ D+              + + +++ + 
Sbjct: 4   RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR 63

Query: 63  VCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVN 122
                 +  + +    LV TA+  FG++D++ NNAGIL     S       D + +  V+
Sbjct: 64  GGKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRD--RSFSRISDEDWDIIQRVH 121

Query: 123 TIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELG 182
             G F   + A   M  Q  G I+ TASA       G   Y+ +K G+LGL   L  E  
Sbjct: 122 LRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSAAKLGLLGLANTLVIEGR 181

Query: 183 QYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDE 242
           +  I  N ++P    + M+     +                E LK + +A   L+L  + 
Sbjct: 182 KNNIHCNTIAP-NAGSRMTETVMPEDL-------------VEALKPEYVAPLVLWLCHE- 226

Query: 243 SSYVSGQNLVVDGGF 257
           S   +G    V  G+
Sbjct: 227 SCEENGGLFEVGAGW 241

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score =  185 bits (470), Expect = 1e-58
 Identities = 79/249 (31%), Positives = 127/249 (51%), Gaps = 9/249 (3%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDIS 71
           RL GK  ++TG ASGIG  A++LF   GA +V  D +++L  +    L  +   +  D+S
Sbjct: 2   RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVS 61

Query: 72  NEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAK 131
           +   V  +   A+ +FG+L  + + AG+         + P    E+++ VN  G FL A+
Sbjct: 62  DPKAVEAVFAEALEEFGRLHGVAHFAGVAHS--ALSWNLPLEAWEKVLRVNLTGSFLVAR 119

Query: 132 HAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCV 191
            A  V+        L    +   +   G   Y   K G++GL + LA EL + G+RVN +
Sbjct: 120 KAGEVLEEG---GSLVLTGSVAGLGAFGLAHYAAGKLGVVGLARTLALELARKGVRVNVL 176

Query: 192 SPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNL 251
            P  + T M+   G+ P   E  +    +  G   + + +A AAL+L S+ES+Y++GQ L
Sbjct: 177 LPGLIQTPMT--AGLPPWAWEQEVGA--SPLGRAGRPEEVAQAALFLLSEESAYITGQAL 232

Query: 252 VVDGGFSVV 260
            VDGG S+V
Sbjct: 233 YVDGGRSIV 241

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  184 bits (468), Expect = 2e-58
 Identities = 65/247 (26%), Positives = 113/247 (45%), Gaps = 10/247 (4%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDIS 71
            L G+  ++TG   GIG   V+  H  GA+VV         + L  +    +  +  D+ 
Sbjct: 4   FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP-GIEPVCVDLG 62

Query: 72  NEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAK 131
           + +      + A+   G +D++ NNA +        L+  K   +R   VN       ++
Sbjct: 63  DWEA----TERALGSVGPVDLLVNNAAVALL--QPFLEVTKEAFDRSFEVNLRAVIQVSQ 116

Query: 132 HAARVMVPQQKGC-ILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNC 190
             AR ++ +     I+  +S C++ A      Y  +K  +  L K +A ELG + IRVN 
Sbjct: 117 IVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNA 176

Query: 191 VSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQN 250
           V+P  + T M      DP   ++ ++++    G+F + + + NA L+L SD S   +G  
Sbjct: 177 VNPTVVMTSMGQATWSDPHKAKTMLNRI--PLGKFAEVEHVVNAILFLLSDRSGMTTGST 234

Query: 251 LVVDGGF 257
           L V+GGF
Sbjct: 235 LPVEGGF 241

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score =  184 bits (468), Expect = 6e-58
 Identities = 70/258 (27%), Positives = 120/258 (46%), Gaps = 12/258 (4%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDIS 71
           +L+G+  +ITGGASG+G   V+ F   GAKV + D   +   +L    G +V  I  D+ 
Sbjct: 2   KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVR 61

Query: 72  NEDEVINLVDTAVSKFGKLDIMYNNAGILDRS---FGSILDTPKSDLERLINVNTIGGFL 128
           + ++        V++FGK+D +  NAGI D S        ++  +  + + ++N  G   
Sbjct: 62  SLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIH 121

Query: 129 GAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRV 188
             K     +V   +G ++FT S        G P YT +K+ I+GLV+ LA EL  Y +RV
Sbjct: 122 AVKACLPALV-ASRGNVIFTISNAGFYPNGGGPLYTAAKHAIVGLVRELAFELAPY-VRV 179

Query: 189 NCVSPYGLATGMSMKGGVDPALIESSMSQMGNLK------GEFLKTDGIANAALYLAS-D 241
           N V   G+ + +     +       S   + ++       G   + +    A ++ A+  
Sbjct: 180 NGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVEEYTGAYVFFATRG 239

Query: 242 ESSYVSGQNLVVDGGFSV 259
           +++  +G  L  DGG  V
Sbjct: 240 DAAPATGALLNYDGGLGV 257

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score =  183 bits (464), Expect = 3e-57
 Identities = 65/259 (25%), Positives = 107/259 (41%), Gaps = 8/259 (3%)

Query: 9   PFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQ----DKLGEDLADKLGQDVC 64
           P    +GKVA ITGG +G+G     L    GA+ VIA  +        E ++ + G  V 
Sbjct: 19  PPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVH 78

Query: 65  YIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTI 124
            I CD+ + D V N V   +   G  +I+ NNA               +  + + ++   
Sbjct: 79  AIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAG--NFISPTERLSPNAWKTITDIVLN 136

Query: 125 GGF-LGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQ 183
           G   +  +   +++  Q+    L   +   E           +K G+  + K LAAE G+
Sbjct: 137 GTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGK 196

Query: 184 YGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDES 243
           YG+R N + P  + T  +          E  M       G     + +AN A +L SD +
Sbjct: 197 YGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPC-GRLGTVEELANLAAFLCSDYA 255

Query: 244 SYVSGQNLVVDGGFSVVNP 262
           S+++G  +  DGG  V+  
Sbjct: 256 SWINGAVIKFDGGEEVLIS 274

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score =  181 bits (461), Expect = 4e-57
 Identities = 61/260 (23%), Positives = 102/260 (39%), Gaps = 18/260 (6%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL----GQDVCYIH 67
               K  I+TGG  GIG          GA V +         ++ +K+    G       
Sbjct: 6   SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQ 65

Query: 68  CDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGF 127
           CD+SN D V   +    +  G +  +  NAG+         +    D   + +VN  G F
Sbjct: 66  CDVSNTDIVTKTIQQIDADLGPISGLIANAGVSV--VKPATELTHEDFAFVYDVNVFGVF 123

Query: 128 LGAKHAARVMVPQQKGCIL--------FTASACTEIAGLGSPAYTISKYGILGLVKCLAA 179
              +  A++ + +Q+   +           +  +    L    Y  SK     LVK LAA
Sbjct: 124 NTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAA 183

Query: 180 ELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLA 239
           E    GIRVN +SP  + T  +    +D  + +   S +      F + + +   A+ L 
Sbjct: 184 EWASAGIRVNALSPGYVNTDQT--AHMDKKIRDHQASNI--PLNRFAQPEEMTGQAILLL 239

Query: 240 SDESSYVSGQNLVVDGGFSV 259
           SD ++Y++G    +DGG  +
Sbjct: 240 SDHATYMTGGEYFIDGGQLI 259

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score =  181 bits (460), Expect = 4e-57
 Identities = 54/249 (21%), Positives = 86/249 (34%), Gaps = 12/249 (4%)

Query: 18  AIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVI 77
           AI+T      G  +     E G  V   D   K  ++L         Y      +E E  
Sbjct: 3   AIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELE---AFAETYPQLKPMSEQEPA 59

Query: 78  NLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVM 137
            L++   S +G++D++ +N       F  I      D    +    I  F      A  M
Sbjct: 60  ELIEAVTSAYGQVDVLVSNDIFA-PEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQM 118

Query: 138 VPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLA 197
             ++ G I+F  SA           YT ++ G   L   L+ ELG+Y I V  + P  L 
Sbjct: 119 KKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLH 178

Query: 198 TGMS------MKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNL 251
           +  S           +P  +                   +     +LAS    Y++GQ  
Sbjct: 179 SEDSPYFYPTEPWKTNPEHVAHVKKV--TALQRLGTQKELGELVAFLASGSCDYLTGQVF 236

Query: 252 VVDGGFSVV 260
            + GGF ++
Sbjct: 237 WLAGGFPMI 245

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score =  180 bits (459), Expect = 5e-57
 Identities = 61/250 (24%), Positives = 115/250 (46%), Gaps = 9/250 (3%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHC 68
             E KVA++TG   GIG    ++  ++ + V+      K  + + D++   G +      
Sbjct: 7   CGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAG 66

Query: 69  DISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFL 128
           D+S ++E+  +++  +++   +DI+ NN           L     + E ++  N    F 
Sbjct: 67  DVSKKEEISEVINKILTEHKNVDILVNN--AGITRDNLFLRMKNDEWEDVLRTNLNSLFY 124

Query: 129 GAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRV 188
             +  ++ M+  + G I+  +S       +G   Y+ SK G++G  K LA EL    I V
Sbjct: 125 ITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELASRNITV 184

Query: 189 NCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSG 248
           N ++P  +++ M+ K          S        G     + +AN A +L+SD+S Y++G
Sbjct: 185 NAIAPGFISSDMTDKISEQIKKNIISNIPA----GRMGTPEEVANLACFLSSDKSGYING 240

Query: 249 QNLVVDGGFS 258
           +  V+DGG S
Sbjct: 241 RVFVIDGGLS 250

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score =  181 bits (461), Expect = 6e-57
 Identities = 64/267 (23%), Positives = 117/267 (43%), Gaps = 17/267 (6%)

Query: 4   PSSAAP-FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADV-QDKLGEDLADKL-- 59
           P    P    LEGKVA++TG   GIG          G KV++      +  E++   +  
Sbjct: 6   PGPLGPQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKK 65

Query: 60  -GQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERL 118
            G D   +  ++   ++++ + + AV  FGKLDI+ +N+G    SFG + D    + +R+
Sbjct: 66  NGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSG--VVSFGHVKDVTPEEFDRV 123

Query: 119 INVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLA 178
             +NT G F  A+ A + +    +  ++ + +   +     +     SK  I    +C+A
Sbjct: 124 FTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVPKHAVYSG-SKGAIETFARCMA 182

Query: 179 AELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLK---------GEFLKTD 229
            ++    I VN V+P G+ T M      +      ++S     +                
Sbjct: 183 IDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPI 242

Query: 230 GIANAALYLASDESSYVSGQNLVVDGG 256
            IA    +LAS++  +V+G+ + +DGG
Sbjct: 243 DIARVVCFLASNDGGWVTGKVIGIDGG 269

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score =  180 bits (457), Expect = 2e-56
 Identities = 75/261 (28%), Positives = 116/261 (44%), Gaps = 16/261 (6%)

Query: 11  KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIH 67
           K+  GKV ++TG    IG        E G  + + D+  +  E     +   G +     
Sbjct: 1   KKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYV 60

Query: 68  CDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGF 127
           CD+++E+ VI  VD+ V  FGK+D ++NNAG    +F  + D P  D  R++ +N  G F
Sbjct: 61  CDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGY-QGAFAPVQDYPSDDFARVLTINVTGAF 119

Query: 128 LGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIR 187
              K  +R M+ Q  G I+ TAS           AY  SK  I+ L +  A +L  Y IR
Sbjct: 120 HVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNIR 179

Query: 188 VNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLK------------GEFLKTDGIANAA 235
           VN +SP  +  G   +  V+      S     + K              +   + I    
Sbjct: 180 VNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVV 239

Query: 236 LYLASDESSYVSGQNLVVDGG 256
            +L  D+SS+++G NL + GG
Sbjct: 240 AFLLGDDSSFMTGVNLPIAGG 260

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score =  179 bits (456), Expect = 2e-56
 Identities = 70/256 (27%), Positives = 122/256 (47%), Gaps = 10/256 (3%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL-----GQDVCYI 66
           R   +V +ITGG SG+G          GAK+ + DV  +  E     +       +V   
Sbjct: 1   RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTT 60

Query: 67  HCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGG 126
             D+S+E +V   V     +FG++D  +NNAGI +           ++ ++++++N  G 
Sbjct: 61  VADVSDEAQVEAYVTATTERFGRIDGFFNNAGI-EGKQNPTESFTAAEFDKVVSINLRGV 119

Query: 127 FLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGI 186
           FLG +   ++M  Q  G ++ TAS            Y  +K+G++GL +  A E G+YGI
Sbjct: 120 FLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGI 179

Query: 187 RVNCVSPYGLATGM--SMKGGVDPALIESSMSQMGNLK--GEFLKTDGIANAALYLASDE 242
           R+N ++P  + T M  +    +DP     +  +   +     + +   IA    +L SD+
Sbjct: 180 RINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSDD 239

Query: 243 SSYVSGQNLVVDGGFS 258
           +SYV+   + +DGG S
Sbjct: 240 ASYVNATVVPIDGGQS 255

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score =  178 bits (452), Expect = 9e-56
 Identities = 83/255 (32%), Positives = 132/255 (51%), Gaps = 9/255 (3%)

Query: 10  FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADV-QDKLGEDLAD---KLGQDVCY 65
           +K LEGKV +ITG ++G+G      F    AKVV+    ++     + +   K+G +   
Sbjct: 2   YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIA 61

Query: 66  IHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIG 125
           +  D++ E +VINLV +A+ +FGKLD+M NNAG+ +    S  +   SD  ++I+ N  G
Sbjct: 62  VKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENP--VSSHEMSLSDWNKVIDTNLTG 119

Query: 126 GFLGAKHAARVMVPQQK-GCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQY 184
            FLG++ A +  V     G ++  +S   +I       Y  SK G+  + + LA E    
Sbjct: 120 AFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPK 179

Query: 185 GIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESS 244
           GIRVN + P  + T ++ +   DP       S +    G   + + IA  A +LAS E+S
Sbjct: 180 GIRVNNIGPGAINTPINAEKFADPEQRADVESMI--PMGYIGEPEEIAAVAAWLASSEAS 237

Query: 245 YVSGQNLVVDGGFSV 259
           YV+G  L  DGG ++
Sbjct: 238 YVTGITLFADGGMTL 252

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  177 bits (450), Expect = 1e-55
 Identities = 75/251 (29%), Positives = 129/251 (51%), Gaps = 11/251 (4%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDIS 71
           RL+GKV I+T  A GIG  A   F   GAKV+  D+ +   ++L    G  +     D++
Sbjct: 3   RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPG--IQTRVLDVT 60

Query: 72  NEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAK 131
            + ++    +    +  +LD+++N AG +    G++LD  + D +  +N+N    +L  K
Sbjct: 61  KKKQIDQFAN----EVERLDVLFNVAGFVHH--GTVLDCEEKDWDFSMNLNVRSMYLMIK 114

Query: 132 HAARVMVPQQKGCILFTASACTEIAG-LGSPAYTISKYGILGLVKCLAAELGQYGIRVNC 190
                M+ Q+ G I+  +S  + + G +    Y+ +K  ++GL K +AA+  Q GIR NC
Sbjct: 115 AFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNC 174

Query: 191 VSPYGLATGMSMKGGVDPALIESSMSQMGNLK--GEFLKTDGIANAALYLASDESSYVSG 248
           V P  + T    +        E + +     +  G F   + IA   +YLASDES+YV+G
Sbjct: 175 VCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESAYVTG 234

Query: 249 QNLVVDGGFSV 259
             +++DGG+S+
Sbjct: 235 NPVIIDGGWSL 245

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score =  177 bits (449), Expect = 2e-55
 Identities = 66/253 (26%), Positives = 108/253 (42%), Gaps = 8/253 (3%)

Query: 13  LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCD 69
           L+G  A++TGG+ GIG   VE     GA+V      +K  ++  +     G +V    CD
Sbjct: 4   LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCD 63

Query: 70  ISNEDEVINLVDTAVSKF-GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFL 128
           + +  E   L+ T    F GKL+I+ NNAG          D  + D   ++  N    + 
Sbjct: 64  LLSRTERDKLMQTVAHVFDGKLNILVNNAG--VVIHKEAKDFTEKDYNIIMGTNFEAAYH 121

Query: 129 GAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRV 188
            ++ A  ++   Q G ++F +S     A      Y+ SK  I  + K LA E  +  IRV
Sbjct: 122 LSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIRV 181

Query: 189 NCVSPYGLATGMSMKGGVDPALIESSMSQMGNLK--GEFLKTDGIANAALYLASDESSYV 246
           N V+P  + T +           +  +         G   K   ++    +L    +SY+
Sbjct: 182 NSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPAASYI 241

Query: 247 SGQNLVVDGGFSV 259
           +GQ +  DGGF+ 
Sbjct: 242 TGQIIWADGGFTA 254

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score =  176 bits (447), Expect = 4e-55
 Identities = 73/260 (28%), Positives = 111/260 (42%), Gaps = 18/260 (6%)

Query: 11  KRLEGKVAIITGGASGIGAMAVELFHENGAKVVI-ADVQDKLGEDLAD---KLGQDVCYI 66
           K L GKVA+ TG   GIG          GA VV+      K  E++     KLG     I
Sbjct: 2   KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAI 61

Query: 67  HCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGG 126
             DIS   EV+ L D AVS FG LD + +N+G+        L+  +   +++ N+NT G 
Sbjct: 62  QADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVW--CDELEVTQELFDKVFNLNTRGQ 119

Query: 127 FLGAKHAARVMVPQQKGCILFTASACTEIAGL-GSPAYTISKYGILGLVKCLAAELGQYG 185
           F  A+   +    ++ G I+ T+S    + G+     Y  SK  + G  +  A + G  G
Sbjct: 120 FFVAQQGLKHC--RRGGRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAKG 177

Query: 186 IRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLK---------GEFLKTDGIANAAL 236
           + VNC++P G+ T M  +     A           +                  I  A  
Sbjct: 178 VTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVS 237

Query: 237 YLASDESSYVSGQNLVVDGG 256
            L  +ES +++GQ + + GG
Sbjct: 238 ALCQEESEWINGQVIKLTGG 257

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score =  175 bits (444), Expect = 7e-55
 Identities = 70/248 (28%), Positives = 122/248 (49%), Gaps = 6/248 (2%)

Query: 13  LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISN 72
            EGK+A++TG + GIG    E     GAKV+     +   + ++D LG +   +  ++++
Sbjct: 2   FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTD 61

Query: 73  EDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKH 132
              + ++++   ++FG++DI+ NNAGI   +   ++     +   +I  N    F  +K 
Sbjct: 62  PASIESVLEKIRAEFGEVDILVNNAGITRDNL--LMRMKDEEWNDIIETNLSSVFRLSKA 119

Query: 133 AARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVS 192
             R M+ ++ G I+   S    +   G   Y  +K G++G  K LA E+   GI VN V+
Sbjct: 120 VMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVA 179

Query: 193 PYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLV 252
           P  + T M+     D      +        G       IANA  +LASDE++Y++G+ L 
Sbjct: 180 PGFIETDMTRALSDDQRAGILAQVPA----GRLGGAQEIANAVAFLASDEAAYITGETLH 235

Query: 253 VDGGFSVV 260
           V+GG  +V
Sbjct: 236 VNGGMYMV 243

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score =  175 bits (444), Expect = 1e-54
 Identities = 77/259 (29%), Positives = 119/259 (45%), Gaps = 15/259 (5%)

Query: 13  LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQD-----KLGEDLADKLGQDVCYIH 67
           L+GKVA++TG  SGIG          GA +V+    D     K+   LA + G  V Y  
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61

Query: 68  CDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGF 127
            D+S  + V  LVD AV + G++DI+ NN     +    I D P    + ++ +N    F
Sbjct: 62  ADLSKGEAVRGLVDNAVRQMGRIDILVNN--AGIQHTALIEDFPTEKWDAILALNLSAVF 119

Query: 128 LGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIR 187
            G   A   M  Q  G I+  ASA   +A     AY  +K+G++G  K  A E    GI 
Sbjct: 120 HGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGIT 179

Query: 188 VNCVSPYGLATGM--------SMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLA 239
            N + P  + T +        + K GVD       +        +F+  + +   A++LA
Sbjct: 180 ANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLA 239

Query: 240 SDESSYVSGQNLVVDGGFS 258
           SD ++ ++G  + VDGG++
Sbjct: 240 SDAAAQITGTTVSVDGGWT 258

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  173 bits (440), Expect = 4e-54
 Identities = 64/260 (24%), Positives = 109/260 (41%), Gaps = 26/260 (10%)

Query: 14  EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL-----GQDVCYIHC 68
            GKVA++TG A GIG    E     GAKV + D   + G      L      Q   +I C
Sbjct: 2   NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQC 61

Query: 69  DISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFL 128
           D++++ ++ +     V  FG+LDI+ NNAG+ +            + E+ + +N +    
Sbjct: 62  DVADQQQLRDTFRKVVDHFGRLDILVNNAGVNNE----------KNWEKTLQINLVSVIS 111

Query: 129 GAKHAARVMVPQQKGC---ILFTASACTEIAGLGSPAYTISKYGILGLVKC--LAAELGQ 183
           G       M  Q  G    I+  +S    +     P Y  SK+GI+G  +   LAA L  
Sbjct: 112 GTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMN 171

Query: 184 YGIRVNCVSPYGLATGM--SMKGGVDPALIESSMSQMGNL--KGEFLKTDGIANAALYLA 239
            G+R+N + P  + T +  S++   +          + ++      L    IAN  + L 
Sbjct: 172 SGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLI 231

Query: 240 SDESSYVSGQNLVVDGGFSV 259
            D+   ++G  + +     +
Sbjct: 232 EDD--ALNGAIMKITTSKGI 249

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score =  173 bits (440), Expect = 5e-54
 Identities = 61/256 (23%), Positives = 104/256 (40%), Gaps = 14/256 (5%)

Query: 15  GKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDIS 71
            +VA++TG  SGIG        + G +V +    ++       +L   G +     CD+ 
Sbjct: 2   SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVR 61

Query: 72  NEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAK 131
           +  E+  LV   V ++G +D++ NNAG      G+  +        ++  N  G F   K
Sbjct: 62  SVPEIEALVAAVVERYGPVDVLVNNAG--RPGGGATAELADELWLDVVETNLTGVFRVTK 119

Query: 132 HAARVMVPQQKGCILFTASACTEIAGL--GSPAYTISKYGILGLVKCLAAELGQYGIRVN 189
              +     ++G       A T        +  Y+ SK+G++G  K L  EL + GI VN
Sbjct: 120 QVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVN 179

Query: 190 CVSPYGLATGM--SMKGGVDPALIESSMSQMGNLK-----GEFLKTDGIANAALYLASDE 242
            V P  + T M  S++         S+      +      G +++   +A    YL    
Sbjct: 180 AVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPG 239

Query: 243 SSYVSGQNLVVDGGFS 258
           ++ V+ Q L V GG  
Sbjct: 240 AAAVTAQALNVCGGLG 255

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score =  170 bits (432), Expect = 6e-53
 Identities = 64/255 (25%), Positives = 111/255 (43%), Gaps = 14/255 (5%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDIS 71
           RL+GK A+ITG A GIG    E +   GA+V IAD+  +     A ++G   C I  D++
Sbjct: 2   RLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVT 61

Query: 72  NEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAK 131
           ++  +   V   + ++G +DI+ NN          I++  +   +RL  +N  G     +
Sbjct: 62  DQASIDRCVAELLDRWGSIDILVNN--AALFDLAPIVEITRESYDRLFAINVSGTLFMMQ 119

Query: 132 HAARVMVPQQKGCILFTASACTEIAGLGSPAYT-ISKYGILGLVKCLAAELGQYGIRVNC 190
             AR M+   +G  +   ++     G         +K  ++ L +     L ++GI VN 
Sbjct: 120 AVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGINVNA 179

Query: 191 VSPYGLATGMSMKGGVDPALIESSMSQMGNLK---------GEFLKTDGIANAALYLASD 241
           ++P  +        GVD    +      G  K         G   + + +   A++LA+ 
Sbjct: 180 IAPGVVDGEHW--DGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGMAIFLATP 237

Query: 242 ESSYVSGQNLVVDGG 256
           E+ Y+  Q   VDGG
Sbjct: 238 EADYIVAQTYNVDGG 252

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  163 bits (414), Expect = 3e-50
 Identities = 56/258 (21%), Positives = 105/258 (40%), Gaps = 32/258 (12%)

Query: 11  KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIH 67
           K + G++ +ITG   GIG +    F +  +K+V+ D+     E+ A K    G  V    
Sbjct: 3   KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFV 62

Query: 68  CDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGF 127
            D SN +++ +      ++ G + I+ NNAG++      +  T    +E+   VN +  F
Sbjct: 63  VDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVY--TSDLFATQDPQIEKTFEVNVLAHF 120

Query: 128 LGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQY--- 184
              K     M     G I+  ASA   ++     AY  SK+  +G  K L  EL      
Sbjct: 121 WTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQIT 180

Query: 185 GIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAAL-------- 236
           G++  C+ P            V+   I++  + +    G  L+ + + N  +        
Sbjct: 181 GVKTTCLCP----------NFVNTGFIKNPSTSL----GPTLEPEEVVNRLMHGILTEQK 226

Query: 237 --YLASDESSYVSGQNLV 252
             ++ S  +   + + ++
Sbjct: 227 MIFIPSSIAFLTTLERIL 244

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score =  163 bits (414), Expect = 3e-50
 Identities = 67/249 (26%), Positives = 119/249 (47%), Gaps = 11/249 (4%)

Query: 16  KVAIITGGASGIGAMAVELFHENGAKVVIADVQD-KLGEDLADKL---GQDVCYIHCDIS 71
            V ++TG + GIG        + G KV++   +  K  E+++ ++   G        D+S
Sbjct: 2   PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVS 61

Query: 72  NEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAK 131
            E +V  ++ TA+  +G +D++ NN          ++   KS  + +I++N  G FL  +
Sbjct: 62  KEADVEAMMKTAIDAWGTIDVVVNN--AGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQ 119

Query: 132 HAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCV 191
            A ++M+ ++KG I+  AS    I  +G   Y  +K G++G  K  A E     I VN V
Sbjct: 120 AATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVV 179

Query: 192 SPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLA-SDESSYVSGQN 250
            P  +A+ M+ K G D          +    G   + + +A    +LA S  +SY++GQ 
Sbjct: 180 CPGFIASDMTAKLGEDMEKKILGTIPL----GRTGQPENVAGLVEFLALSPAASYITGQA 235

Query: 251 LVVDGGFSV 259
             +DGG ++
Sbjct: 236 FTIDGGIAI 244

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score =  163 bits (413), Expect = 3e-50
 Identities = 57/246 (23%), Positives = 104/246 (42%), Gaps = 17/246 (6%)

Query: 13  LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISN 72
           +  K  ++   + GIG    ++  + GA+V I    ++L +    +      Y+ CD+  
Sbjct: 2   IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHR------YVVCDLRK 55

Query: 73  EDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKH 132
           +      +D    K  ++DI+  NAG      G   +    D +  I+   +      ++
Sbjct: 56  D------LDLLFEKVKEVDILVLNAGGPKA--GFFDELTNEDFKEAIDSLFLNMIKIVRN 107

Query: 133 AARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVS 192
               M  +  G I+   S               ++  + G +K L+ E+  YGI VNCV+
Sbjct: 108 YLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVA 167

Query: 193 PYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLV 252
           P    T   +K  +     +   SQ+        K + IA+   +L S+++SY++GQ +V
Sbjct: 168 PGWTETER-VKELLSEEKKKQVESQI--PMRRMAKPEEIASVVAFLCSEKASYLTGQTIV 224

Query: 253 VDGGFS 258
           VDGG S
Sbjct: 225 VDGGLS 230

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score =  162 bits (412), Expect = 6e-50
 Identities = 45/263 (17%), Positives = 81/263 (30%), Gaps = 24/263 (9%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL----GQDVCYIH 67
            L  K  I      GIG        +   K  +   + +    LA+        ++ +  
Sbjct: 2   DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHT 61

Query: 68  CDISNEDE-VINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGG 126
            D++        L+     +   +DI+ N AGILD             +ER I +N  G 
Sbjct: 62  YDVTVPVAESKKLLKKIFDQLKTVDILINGAGILDDH----------QIERTIAINFTGL 111

Query: 127 FLGAKHAARVMVPQQ---KGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQ 183
                        ++    G I    S     A    P Y+ SK  ++     LA     
Sbjct: 112 VNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPI 171

Query: 184 YGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDES 243
            G+    ++P    T + +        +E  ++++  L     +T          A    
Sbjct: 172 TGVTAYSINPGITRTPL-VHTFNSWLDVEPRVAEL--LLSHPTQTSEQCGQNFVKAI--E 226

Query: 244 SYVSGQNLVVDGGF-SVVNPTVM 265
           +  +G    +D G    +  T  
Sbjct: 227 ANKNGAIWKLDLGTLEAIEWTKH 249

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score =  161 bits (407), Expect = 4e-49
 Identities = 72/259 (27%), Positives = 116/259 (44%), Gaps = 18/259 (6%)

Query: 16  KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISN 72
           KVA++TG   GIG        ++G  V IAD  D   + +A ++   G     +  D+S+
Sbjct: 2   KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSD 61

Query: 73  EDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKH 132
            D+V   V+ A    G  D++ NNAG        I       ++++ N+N  G   G + 
Sbjct: 62  RDQVFAAVEQARKTLGGFDVIVNNAG--VAPSTPIESITPEIVDKVYNINVKGVIWGIQA 119

Query: 133 AARVMVPQQKGCILFTASACTEIAGLG-SPAYTISKYGILGLVKCLAAELGQYGIRVNCV 191
           A      +  G  +  A +     G      Y+ SK+ + GL +  A +L   GI VN  
Sbjct: 120 AVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGY 179

Query: 192 SPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKT---------DGIANAALYLASDE 242
            P  + T M  +  +D  + E++   +G    EF K          + +A    YLAS +
Sbjct: 180 CPGIVKTPMWAE--IDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPD 237

Query: 243 SSYVSGQNLVVDGGFSVVN 261
           S Y++GQ+L++DGG  V N
Sbjct: 238 SDYMTGQSLLIDGGM-VFN 255

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score =  156 bits (395), Expect = 3e-47
 Identities = 52/254 (20%), Positives = 101/254 (39%), Gaps = 10/254 (3%)

Query: 13  LEGKVAIITGGAS--GIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQD--VCYIHC 68
           L GK A++ G  +   +G        E GA+V ++   ++L  +                
Sbjct: 6   LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRA 65

Query: 69  DISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRS--FGSILDTPKSDLERLINVNTIGG 126
           D++ ++E+  L       FG LD + +      R    G  +DT + D    + V+    
Sbjct: 66  DVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSL 125

Query: 127 FLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGI 186
              A+ A  ++  ++ G I+      +E          I+K  +   V+ LA ELG  G+
Sbjct: 126 VAVARRAEPLL--REGGGIVTLTYYASEKVVPKYNVMAIAKAALEASVRYLAYELGPKGV 183

Query: 187 RVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYV 246
           RVN +S   + T  +        + +             +  + + N  L+L S  +S +
Sbjct: 184 RVNAISAGPVRTVAARSIPGFTKMYDRVAQT--APLRRNITQEEVGNLGLFLLSPLASGI 241

Query: 247 SGQNLVVDGGFSVV 260
           +G+ + VD G+ ++
Sbjct: 242 TGEVVYVDAGYHIM 255

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  155 bits (393), Expect = 3e-47
 Identities = 56/246 (22%), Positives = 106/246 (43%), Gaps = 14/246 (5%)

Query: 13  LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISN 72
              +  ++TGG  GIG    +    +G KV +        + L          +  D+++
Sbjct: 5   FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF--------GVEVDVTD 56

Query: 73  EDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKH 132
            D V           G ++++ +NAG    +   ++   +   E++IN N  G F  A+ 
Sbjct: 57  SDAVDRAFTAVEEHQGPVEVLVSNAG--LSADAFLMRMTEEKFEKVINANLTGAFRVAQR 114

Query: 133 AARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVS 192
           A+R M   + G ++F  S            Y  SK G++G+ + +A EL +  +  N V+
Sbjct: 115 ASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVA 174

Query: 193 PYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLV 252
           P  + T M+    +D  + + ++  +            +A    +LAS+++SY+SG  + 
Sbjct: 175 PGYIDTDMT--RALDERIQQGALQFI--PAKRVGTPAEVAGVVSFLASEDASYISGAVIP 230

Query: 253 VDGGFS 258
           VDGG  
Sbjct: 231 VDGGMG 236

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score =  155 bits (392), Expect = 7e-47
 Identities = 59/266 (22%), Positives = 98/266 (36%), Gaps = 28/266 (10%)

Query: 17  VAIITGGASGIGAMAVELFHENGAKVVIADVQ-----DKLGEDLADKLGQDVCYIHCDIS 71
            A+ITGGA  IG       H+ G +VV+          +L  +L             D+S
Sbjct: 3   AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLS 62

Query: 72  N----EDEVINLVDTAVSKFGKLDIMYNNAGILDRS---------FGSILDTPKSDLERL 118
                 D   +++D +   FG+ D++ NNA     +           +      + +  L
Sbjct: 63  LSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAEL 122

Query: 119 INVNTIGGFLGAKHAARVMVPQQKGCILFTA-----SACTEIAGLGSPAYTISKYGILGL 173
              N +      +  AR             +      A T++   G   YT++K+ + GL
Sbjct: 123 FGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKHALGGL 182

Query: 174 VKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIAN 233
            +  A EL    IRVN V+P       +M               +G  +        IA+
Sbjct: 183 TRAAALELAPRHIRVNAVAPGLSLLPPAMPQETQEEYRRKVP--LGQSEAS---AAQIAD 237

Query: 234 AALYLASDESSYVSGQNLVVDGGFSV 259
           A  +L S ++ Y++G  L VDGG  +
Sbjct: 238 AIAFLVSKDAGYITGTTLKVDGGLIL 263

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score =  150 bits (379), Expect = 3e-45
 Identities = 55/253 (21%), Positives = 92/253 (36%), Gaps = 27/253 (10%)

Query: 16  KVAIITGGASGIGAMAVELFHENGAK-------VVIADVQDKLGEDLADKL---GQDVCY 65
            + +ITG   GIG      F             +V++       E ++ +    G     
Sbjct: 2   HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDT 61

Query: 66  IHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIG 125
           I  DIS+  +V  L    V ++G +D + NN       FG++ D  + D +  +N N  G
Sbjct: 62  ITADISDMADVRRLTTHIVERYGHIDCLVNN--AGVGRFGALSDLTEEDFDYTMNTNLKG 119

Query: 126 GFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYG 185
            F   +    +M  Q  G I F  S     A   S  Y +SK+G  GLV+ +     +  
Sbjct: 120 TFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKCN 179

Query: 186 IRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSY 245
           +R+  V P  + T M  K   +              +   +  + IA   +      S  
Sbjct: 180 VRITDVQPGAVYTPMWGKVDDEM-------------QALMMMPEDIAAPVVQAYLQPSRT 226

Query: 246 VSGQNLV--VDGG 256
           V  + ++    G 
Sbjct: 227 VVEEIILRPTSGD 239

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score =  149 bits (376), Expect = 1e-44
 Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 21/248 (8%)

Query: 16  KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDE 75
           + A++TGGASG+G  A       G +VV+ D++ +         G+D+ Y+  D++ E++
Sbjct: 2   RSALVTGGASGLGRAAALALKARGYRVVVLDLRRE---------GEDLIYVEGDVTREED 52

Query: 76  VINLVDTAVSKF-GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAA 134
           V   V  A  +      +     G+ ++  G           R++ VN +G F   + AA
Sbjct: 53  VRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAA 112

Query: 135 RV------MVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRV 188
                       Q+G I+ TAS       +G  AY  SK G++ L    A EL  +GIRV
Sbjct: 113 WAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELAGWGIRV 172

Query: 189 NCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSG 248
             V+P    T +           ++S++          + +  A   L++  +    ++G
Sbjct: 173 VTVAPGLFDTPLLQGLPEKA---KASLAAQVPFPPRLGRPEEYAALVLHILEN--PMLNG 227

Query: 249 QNLVVDGG 256
           + + +DG 
Sbjct: 228 EVVRLDGA 235

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score =  140 bits (354), Expect = 3e-41
 Identities = 50/254 (19%), Positives = 92/254 (36%), Gaps = 7/254 (2%)

Query: 12  RLEGKVAIITGGAS--GIGAMAVELFHENGAKVVIADVQDKLGEDLAD--KLGQDVCYIH 67
            L GK  ++TG AS   I     +  H  GA++      DKL   + +          + 
Sbjct: 2   FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQ 61

Query: 68  CDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGF 127
           CD++ +  +  +       + K D   ++ G                 E     + I  +
Sbjct: 62  CDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSY 121

Query: 128 LGAKHAARVMVPQQKGCILFTASACTEIAGL-GSPAYTISKYGILGLVKCLAAELGQYGI 186
                A         G  L T S       +       ++K  +   V+ +A  +G  G+
Sbjct: 122 SFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPEGV 181

Query: 187 RVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYV 246
           RVN +S   + T  +        ++    +         +  + + N+A +L SD S+ +
Sbjct: 182 RVNAISAGPIRTLAASGIKDFRKMLAHCEAV--TPIRRTVTIEDVGNSAAFLCSDLSAGI 239

Query: 247 SGQNLVVDGGFSVV 260
           SG+ + VDGGFS+ 
Sbjct: 240 SGEVVHVDGGFSIA 253

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  138 bits (349), Expect = 1e-40
 Identities = 44/259 (16%), Positives = 85/259 (32%), Gaps = 21/259 (8%)

Query: 12  RLEGKVAIITGGASGIGAMAVELFHE---NGAKVVIADVQDKLGEDLADKL-----GQDV 63
            L   V ++TG + G G             G+ ++++   + +   L ++L        V
Sbjct: 3   GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKV 62

Query: 64  CYIHCDISNEDEVINLV----DTAVSKFGKLDIMYNNAGILDR-SFGSILDTPKSDLERL 118
                D+  E  V  L+    +    +  +  ++ NNA  L   S G +     +++   
Sbjct: 63  VLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNY 122

Query: 119 INVNTIGGFLGAKHAARVM--VPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKC 176
             +N                  P     ++  +S C      G   Y   K     L + 
Sbjct: 123 WALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLYQV 182

Query: 177 LAAELGQYGIRVNCVSPYGLATGM--SMKGGVDPALIESSMSQMGNLKGEFLKTDGIANA 234
           LAAE     +RV   +P  L   M    +       + S + ++ +  G  +     A  
Sbjct: 183 LAAEE--PSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSD-GALVDCGTSAQK 239

Query: 235 ALYLASDESSYVSGQNLVV 253
            L L     ++ SG ++  
Sbjct: 240 LLGLLQK-DTFQSGAHVDF 257

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  134 bits (338), Expect = 6e-39
 Identities = 67/253 (26%), Positives = 116/253 (45%), Gaps = 15/253 (5%)

Query: 11  KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDI 70
           + ++G VA+ITGGASG+G    E     GA  V+ D+ +  GE  A KLG +  +   D+
Sbjct: 1   RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADV 60

Query: 71  SNEDEVINLVDTAVSKFGKLDIMYNNAGILDRS----FGSILDTPKSDLERLINVNTIGG 126
           ++E +V   +  A  KFG++D+  N AGI   S              D +R+++VN +G 
Sbjct: 61  TSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGT 120

Query: 127 FLGAKHAARVMVPQQ------KGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAE 180
           F   +  A  M   +      +G I+ TAS       +G  AY+ SK GI+G+   +A +
Sbjct: 121 FNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARD 180

Query: 181 LGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLAS 240
           L   GIRV  ++P    T +       P  + + ++               A+    +  
Sbjct: 181 LAPIGIRVMTIAPGLFGTPLLTS---LPEKVCNFLASQVPFPSRLGDPAEYAHLVQAIIE 237

Query: 241 DESSYVSGQNLVV 253
             + +++G+ + +
Sbjct: 238 --NPFLNGEVIRL 248

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  134 bits (339), Expect = 7e-39
 Identities = 38/199 (19%), Positives = 74/199 (37%), Gaps = 9/199 (4%)

Query: 11  KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL----GQDVCYI 66
           + L+GK  I+TG + GIG        + GA VV+     +  + +             YI
Sbjct: 10  EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYI 69

Query: 67  HCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGG 126
              + +       V  A    G LD++  N      +  ++       + + + VN +  
Sbjct: 70  AGTMEDMTFAEQFVAQAGKLMGGLDMLILNHIT--NTSLNLFHDDIHHVRKSMEVNFLSY 127

Query: 127 FLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELG--QY 184
            +    A  ++  Q  G I+  +S   ++A     AY+ SK+ + G    +  E    + 
Sbjct: 128 VVLTVAALPML-KQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRV 186

Query: 185 GIRVNCVSPYGLATGMSMK 203
            + +       + T  +MK
Sbjct: 187 NVSITLCVLGLIDTETAMK 205

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  131 bits (329), Expect = 8e-38
 Identities = 36/253 (14%), Positives = 73/253 (28%), Gaps = 24/253 (9%)

Query: 14  EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNE 73
           E +  ++ GG   +G+  V+ F      V   DV     E+        V          
Sbjct: 1   EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVV----ENEEASASVIVKMTDSFTEQA 56

Query: 74  DEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHA 133
           D+V   V   +    K+D +   AG       +   +   + + +   +     + +  A
Sbjct: 57  DQVTAEVGKLL-GDQKVDAILCVAGG-WAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLA 114

Query: 134 ARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYG--IRVNCV 191
            + +       +    +        G   Y ++K  +  L + LA +            V
Sbjct: 115 TKHLKEGG--LLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAV 172

Query: 192 SPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNL 251
            P  L T M+ K   +                 +   + +        +      SG  +
Sbjct: 173 LPVTLDTPMNRKSMPEADF------------SSWTPLEFLVETFHDWITGNKRPNSGSLI 220

Query: 252 VV--DGGFSVVNP 262
            V    G + + P
Sbjct: 221 QVVTTDGKTELTP 233

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

 Score =  132 bits (331), Expect = 8e-38
 Identities = 47/253 (18%), Positives = 92/253 (36%), Gaps = 6/253 (2%)

Query: 12  RLEGKVAIITGGAS--GIGAMAVELFHENGAKVVIADVQDKLGEDLAD--KLGQDVCYIH 67
            L+GK  +I G A+   I     +     GA +    + + L + +    +         
Sbjct: 2   FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYE 61

Query: 68  CDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGF 127
            D+S E+   +L ++     G LD + ++     +          S       +      
Sbjct: 62  LDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYS 121

Query: 128 LGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIR 187
           L         +      +L  +   +           ++K  +   V+ LA +LG++ IR
Sbjct: 122 LIELTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMGLAKAALESAVRYLAVDLGKHHIR 181

Query: 188 VNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVS 247
           VN +S   + T  S        +++ +         + +  + + NA +YL S  SS VS
Sbjct: 182 VNALSAGPIRTLASSGIADFRMILKWNEINAPL--RKNVSLEEVGNAGMYLLSSLSSGVS 239

Query: 248 GQNLVVDGGFSVV 260
           G+   VD G+ V+
Sbjct: 240 GEVHFVDAGYHVM 252

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score =  125 bits (315), Expect = 2e-35
 Identities = 56/269 (20%), Positives = 108/269 (40%), Gaps = 36/269 (13%)

Query: 16  KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDE 75
            + +I+G A+GIGA   ++    G ++V  D++D                +  D+S  + 
Sbjct: 2   SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDA--------------EVIADLSTAEG 47

Query: 76  VINLVDTAVSKFGK-LDIMYNNAGILDRS--FGSILDT----------------PKSDLE 116
               +   ++K  K +D +   AG+  ++   G+++                   K    
Sbjct: 48  RKQAIADVLAKCSKGMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQP 107

Query: 117 RLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLG-SPAYTISKYGILGLVK 175
             + ++++     A     + +  + G      +        G + AY  SK  +   V+
Sbjct: 108 AAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVR 167

Query: 176 CLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAA 235
             AA  G+ G+R+N ++P    T +   G  DP   ES    +  + G   +   +A+  
Sbjct: 168 KRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPM-GRRAEPSEMASVI 226

Query: 236 LYLASDESSYVSGQNLVVDGGFS-VVNPT 263
            +L S  +SYV G  +V+DGG   V+ PT
Sbjct: 227 AFLMSPAASYVHGAQIVIDGGIDAVMRPT 255

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  124 bits (313), Expect = 2e-35
 Identities = 39/246 (15%), Positives = 78/246 (31%), Gaps = 29/246 (11%)

Query: 13  LEGKVAIITGGASGIGAMAVELFHENGA--KVVIADVQDKLGEDLADKLGQDVCYIHCDI 70
           +     ++TG   GIG   V+   ++     ++      +   +L       V  +   +
Sbjct: 1   MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTV 60

Query: 71  SNEDEVINLVDTAVSKFGK--LDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFL 128
           + +  +   V       G   L ++ NNAG+L  S+G+  +  ++ +   ++VNT    L
Sbjct: 61  TCDKSLDTFVSKVGEIVGSDGLSLLINNAGVL-LSYGTNTEPNRAVIAEQLDVNTTSVVL 119

Query: 129 GAKHAARVMVPQQKG------------------CILFTASACTEIAGLGSPAYTISKYGI 170
             +    ++                         +       +  A     AY +SK  I
Sbjct: 120 LTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAI 179

Query: 171 LGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPA--LIESSMSQMGNLK----GE 224
               + LA +L    + V    P  + T +  K             +S    L     G 
Sbjct: 180 NMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKNAALTVEQSTAELISSFNKLDNSHNGR 239

Query: 225 FLKTDG 230
           F   + 
Sbjct: 240 FFMRNL 245

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score =  122 bits (307), Expect = 4e-34
 Identities = 59/285 (20%), Positives = 95/285 (33%), Gaps = 49/285 (17%)

Query: 17  VAIITGGASGIGAMAVELFHENGAKVVIADVQDK-LGEDLADKLGQ-------------- 61
           VA++TG A  +G    E  H  G  V +   +       L+  L                
Sbjct: 4   VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLS 63

Query: 62  -------DVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSD 114
                          ++       LV    + +G+ D++ NNA         +L   +  
Sbjct: 64  NVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYP--TPLLRNDEDG 121

Query: 115 LER--------------LINVNTIGGFLGAKHA------ARVMVPQQKGCILFTASACTE 154
            E               L   N I  +   K                   I+    A T 
Sbjct: 122 HEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTN 181

Query: 155 IAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESS 214
              LG   YT++K  + GL +  A EL    IRVN V P        M     PA+ E  
Sbjct: 182 QPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDM----PPAVWEGH 237

Query: 215 MSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSV 259
            S++  L         +++  ++L S ++ Y++G  + VDGG+S+
Sbjct: 238 RSKV-PLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL 281

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

 Score =  122 bits (306), Expect = 4e-34
 Identities = 50/264 (18%), Positives = 95/264 (35%), Gaps = 15/264 (5%)

Query: 12  RLEGKVAIITGGA--SGIGAMAVELFHENGAKVVIADVQ-DKLGEDLADKLGQDVCYIHC 68
            L+GK  +++G    S I      +  E GA++V+      +L + + D+L      +  
Sbjct: 3   LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLEL 62

Query: 69  DISNEDEVINLVDTAVSK---FGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIG 125
           D+ NE+ + +L            KLD + ++ G + ++   I     +    +     I 
Sbjct: 63  DVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHIS 122

Query: 126 GFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYG 185
            +  A  A  ++     G  +         A       T++K  +  + + +A E G+YG
Sbjct: 123 AYSYASMAKALLPIMNPGGSIVGMDFDPSRAMPAYNWMTVAKSALESVNRFVAREAGKYG 182

Query: 186 IRVNCVSPYGLATGM---------SMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAAL 236
           +R N V+   + T             + G    L+E    Q   +         +A    
Sbjct: 183 VRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVAKTVC 242

Query: 237 YLASDESSYVSGQNLVVDGGFSVV 260
            L SD     +G  +  DGG    
Sbjct: 243 ALLSDWLPATTGDIIYADGGAHTQ 266

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  117 bits (294), Expect = 3e-32
 Identities = 49/285 (17%), Positives = 87/285 (30%), Gaps = 74/285 (25%)

Query: 16  KVAIITGGASGIG-AMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDIS 71
            VA++TGG  GIG A+  +L       VV+       G+    +L   G    +   DI 
Sbjct: 4   HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDID 63

Query: 72  NEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAK 131
           +   +  L D    ++G LD++ NNAGI  +   +         E  +  N  G      
Sbjct: 64  DLQSIRALRDFLRKEYGGLDVLVNNAGIAFK--VADPTPFHIQAEVTMKTNFFGTRDVCT 121

Query: 132 HAARVMVPQQKGCILFTASACTEIAGLGSPAY---------------------------- 163
               ++  + +G ++  +S  +  A                                   
Sbjct: 122 ELLPLI--KPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKK 179

Query: 164 -------------TISKYGILGLVKCLAAELGQY----GIRVNCVSPYGLATGMSMKGGV 206
                         ++K G+  L +  A +L +      I +N   P  + T M+     
Sbjct: 180 GVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPKAT 239

Query: 207 DPALIESSMSQMGNLKGEFLKTDGIANAALYLA--SDESSYVSGQ 249
                                 +  A   +YLA    ++    GQ
Sbjct: 240 KSP-------------------EEGAETPVYLALLPPDAEGPHGQ 265

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  113 bits (283), Expect = 1e-30
 Identities = 41/262 (15%), Positives = 80/262 (30%), Gaps = 29/262 (11%)

Query: 16  KVAIITGGASGIGAMAVELFHENGAKVVIADV-------QDKLGEDLAD--KLGQDVCYI 66
            V +ITG +SGIG         + ++             Q +L E           +  +
Sbjct: 3   TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETL 62

Query: 67  HCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGG 126
             D+ +   V    +        + +     G+L        D   S     ++VN +G 
Sbjct: 63  QLDVRDSKSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASV----LDVNVVGT 118

Query: 127 FLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGI 186
               +     M  +  G +L T S    +    +  Y  SK+ + GL + LA  L  +G+
Sbjct: 119 VRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGV 178

Query: 187 RVNCVSPYGLATGM---------SMKGGVDPALIESSMSQMGNLKGEFLKTDG----IAN 233
            ++ +    + T            +    D          + + K  F +       +A 
Sbjct: 179 HLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAE 238

Query: 234 AALYLASDES---SYVSGQNLV 252
             L           Y + +  +
Sbjct: 239 VFLTALRAPKPTLRYFTTERFL 260

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  109 bits (272), Expect = 2e-29
 Identities = 43/254 (16%), Positives = 88/254 (34%), Gaps = 31/254 (12%)

Query: 15  GKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNED 74
           GKV I+ GG   +G+  +E F +NG  V+  D+        A+        +  + +  +
Sbjct: 3   GKV-IVYGGKGALGSAILEFFKKNGYTVLNIDLS-------ANDQADSNILVDGNKNWTE 54

Query: 75  EVINLVDTAVS--KFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKH 132
           +  ++++   S  +  ++D ++  AG       +       + + +I  +     + AK 
Sbjct: 55  QEQSILEQTASSLQGSQVDGVFCVAGGW-AGGSASSKDFVKNADLMIKQSVWSSAIAAKL 113

Query: 133 AARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYG--IRVNC 190
                  +  G +  T +A           Y ++K  +  L   LAA+         V  
Sbjct: 114 --ATTHLKPGGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLT 171

Query: 191 VSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAAL-YLASDESSYVSGQ 249
           + P  L T M+ K   +                 +     I+   L +     S   SG 
Sbjct: 172 IMPVTLDTPMNRKWMPNADH------------SSWTPLSFISEHLLKWTTETSSRPSSGA 219

Query: 250 NLVV---DGGFSVV 260
            L +   +G  ++ 
Sbjct: 220 LLKITTENGTSTIT 233

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score =  106 bits (264), Expect = 1e-27
 Identities = 45/325 (13%), Positives = 98/325 (30%), Gaps = 80/325 (24%)

Query: 15  GKVAIITGGAS--GIGAMAVELFHENGAKVVIADVQDKLGE------------------- 53
             +  I G     G G    +   +   K++                             
Sbjct: 2   EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKD 61

Query: 54  ---DLADKLGQDVCYIH-------------CDISNEDEVINLVDTAVSKFGKLDIMYNNA 97
              ++ D L  D  +                ++     + ++ +    K+GK++++ ++ 
Sbjct: 62  KKMNILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSL 121

Query: 98  GILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAG 157
                    +L+T +      ++ ++       K+   +M PQ       T  A  ++  
Sbjct: 122 ANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQSSIIS-LTYHASQKVVP 180

Query: 158 LGSPAYTISKYGILGLVKCLAAELG-QYGIRVNCVSPYGLATGMSMKGGVDPALIESSMS 216
                 + +K  +    + LA  LG  Y IR+N +S   L +  +          E++ +
Sbjct: 181 GYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENNTN 240

Query: 217 QMGNLK-----------------------------------------GEFLKTDGIANAA 235
           Q  N                                            + L +  I + A
Sbjct: 241 QNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVA 300

Query: 236 LYLASDESSYVSGQNLVVDGGFSVV 260
            +L S ES  ++GQ + VD G +++
Sbjct: 301 SFLLSRESRAITGQTIYVDNGLNIM 325

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score =  101 bits (251), Expect = 7e-26
 Identities = 51/286 (17%), Positives = 87/286 (30%), Gaps = 39/286 (13%)

Query: 12  RLEGKVAIITGGAS--GIGAMAVELFHENGAKVVIADVQDKLGED--------------- 54
            L GK A I G A   G G    +     GA++++      L                  
Sbjct: 5   DLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVL 64

Query: 55  -------------LADKLGQDVCY-------IHCDISNEDEVINLVDTAVSKFGKLDIMY 94
                        L                      S+   V    +     FG +DI+ 
Sbjct: 65  PDGSLMEIKKVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILV 124

Query: 95  NNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTE 154
           ++          +L+T +      I+ ++        H   +M P      L   ++   
Sbjct: 125 HSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGGASISLTYIASERI 184

Query: 155 IAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESS 214
           I G G    +                  +  IRVN +S   L +  +   G    +IE S
Sbjct: 185 IPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMIEYS 244

Query: 215 MSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVV 260
            +       + L  D + NAA +L S  +S ++G  + VD G + +
Sbjct: 245 YNN--APIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNSM 288

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 95.2 bits (235), Expect = 6e-24
 Identities = 48/262 (18%), Positives = 84/262 (32%), Gaps = 41/262 (15%)

Query: 16  KVAIITGGASGIGAMAVELF---HENGAKVVIADVQDKLGEDLAD--KLGQDVCYIHCDI 70
              +ITG   G+G   V+      +    +       +  ++L D  K   ++  +  D+
Sbjct: 3   NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDL 62

Query: 71  SNEDEV--INLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFL 128
            N D    +      V+K   L++++NNAGI  +S   I      +L   +  NT+   +
Sbjct: 63  RNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKS-ARITAVRSQELLDTLQTNTVVPIM 121

Query: 129 GAKHAARVMVPQQKGCILF--------------TASACTEIAGLGSPAYTISKYGILGLV 174
            AK    ++    K                      +       G  AY  SK  +    
Sbjct: 122 LAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAAT 181

Query: 175 KCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANA 234
           K L+ +L    I    + P  + T M       P  + +S             T  I   
Sbjct: 182 KSLSVDLYPQRIMCVSLHPGWVKTDMGGSSA--PLDVPTS-------------TGQIVQT 226

Query: 235 ALYLASDESSYVSGQNLVVDGG 256
              L   +    +G  +  DG 
Sbjct: 227 ISKLGEKQ----NGGFVNYDGT 244

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

 Score = 70.7 bits (172), Expect = 2e-15
 Identities = 20/178 (11%), Positives = 52/178 (29%), Gaps = 15/178 (8%)

Query: 11  KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQD--VCYIHC 68
             ++GK A++  G   +G  +  L    GA+VV+   +    +  AD + +   V     
Sbjct: 19  GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAA 78

Query: 69  DISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFL 128
           + +++                   ++    I       +   P++  +   ++  +  + 
Sbjct: 79  ETADDASRAEA-------VKGAHFVFTAGAI------GLELLPQAAWQNESSIEIVADYN 125

Query: 129 GAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGI 186
                    +        +         G+G     + +  I  L +          I
Sbjct: 126 AQPPLGIGGIDATDKGKEYGGKRAFGALGIGGLKLKLHRACIAKLFESSEGVFDAEEI 183

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 70.8 bits (172), Expect = 5e-15
 Identities = 27/218 (12%), Positives = 61/218 (27%), Gaps = 14/218 (6%)

Query: 5   SSAAPFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVI----ADVQDKLGEDLADKLG 60
           ++   +K       ++TGG  G+G          GA  ++    +        +L  +L 
Sbjct: 1   ATDDEWK--PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELE 58

Query: 61  QDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLIN 120
                      +  +  ++ +        + +            G++       +ER   
Sbjct: 59  ALGARTTVAACDVTDRESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASR 118

Query: 121 VNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAE 180
                  LGA++   +         +  +S  +     G   Y          +  LA +
Sbjct: 119 AK----VLGARNLHELTRELDLTAFVLFSSFASAFGAPGLGGYAPGN----AYLDGLAQQ 170

Query: 181 LGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQM 218
               G+    V+    A     +G V        + +M
Sbjct: 171 RRSDGLPATAVAWGTWAGSGMAEGPVADRFRRHGVIEM 208

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 66.6 bits (161), Expect = 7e-14
 Identities = 25/193 (12%), Positives = 54/193 (27%), Gaps = 6/193 (3%)

Query: 16  KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISN 72
           +VA++ GG   +G          G ++V+   +++  E  A +      D         +
Sbjct: 2   RVALL-GGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNED 60

Query: 73  EDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKH 132
             E  ++    +     +D   +   IL          P                  A+ 
Sbjct: 61  AAEACDIAVLTIPWEHAIDTARDLKNILREKIVVSPLVP--VSRGAKGFTYSSERSAAEI 118

Query: 133 AARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVS 192
            A V+  ++    L T  A           + +   G     K +   L      +  + 
Sbjct: 119 VAEVLESEKVVSALHTIPAARFANLDEKFDWDVPVCGDDDESKKVVMSLISEIDGLRPLD 178

Query: 193 PYGLATGMSMKGG 205
              L+    ++  
Sbjct: 179 AGPLSNSRLVESL 191

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.1 bits (121), Expect = 4e-08
 Identities = 24/200 (12%), Positives = 57/200 (28%), Gaps = 32/200 (16%)

Query: 16  KVAIITGGASGIGAMAVELFHENGAKVVIAD---------VQDKLGEDLADKLGQDVCYI 66
            VA+ITG     G+   E   E G +V               + L ++    +  ++   
Sbjct: 2   NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLH 61

Query: 67  HCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGG 126
           + D+++   ++ +++    +    +I    A        S +       E   +V+ + G
Sbjct: 62  YGDLTDSTCLVKIIN----EVKPTEIYNLGA-------QSHVKISFDLAEYTADVDGV-G 109

Query: 127 FLGAKHAARVMVPQQKGCILFTASACTEIAGLGSP-----------AYTISKYGILGLVK 175
            L    A +             +++         P            Y  +K     +V 
Sbjct: 110 TLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVV 169

Query: 176 CLAAELGQYGIRVNCVSPYG 195
                   + +     +   
Sbjct: 170 NFREAYNLFAVNGILFNHES 189

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 45.1 bits (105), Expect = 4e-06
 Identities = 12/75 (16%), Positives = 26/75 (34%), Gaps = 9/75 (12%)

Query: 16 KVAIITGGASGIGAMAVELFHENGAKVVIAD---------VQDKLGEDLADKLGQDVCYI 66
          K+A+ITG     G+   E     G +V               + +  D  +     +   
Sbjct: 2  KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLH 61

Query: 67 HCDISNEDEVINLVD 81
          + D+++   +   +D
Sbjct: 62 YADLTDASSLRRWID 76

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 44.6 bits (104), Expect = 5e-06
 Identities = 34/204 (16%), Positives = 72/204 (35%), Gaps = 14/204 (6%)

Query: 19  IITGGASGIGAMAVELFHENGAKVVIADV----QDKLGEDLADKLGQDVCYIHCDISNED 74
           ++TGG+  IG+       +NG  V+I D     +  +   +    G+   ++  DI NE 
Sbjct: 4   LVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEA 63

Query: 75  EVINLVDTAVSKFGKLDIMYNNAGI--LDRSFGSILDTPKSDLERLINVNTIGGFLGAKH 132
            +  ++         +D + + AG+  +  S    L+   +++   + + +       K+
Sbjct: 64  LMTEIL-----HDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKN 118

Query: 133 AARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVK-CLAAELGQYGIRVNCV 191
                     G         +   G     Y  SK  +  ++     A+       +   
Sbjct: 119 FIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYF 178

Query: 192 SPYGLATGMSMKGGVDPALIESSM 215
           +P G     S   G DP  I +++
Sbjct: 179 NPVG--AHPSGDMGEDPQGIPNNL 200

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 44.0 bits (103), Expect = 9e-06
 Identities = 33/201 (16%), Positives = 62/201 (30%), Gaps = 35/201 (17%)

Query: 16  KVAIITGGASGIGAMAVELFHENGAKVVIAD---------VQDKLGEDLADKLGQDVCYI 66
           KVA+ITG     G+   E   E G +V               D + +D            
Sbjct: 2   KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTC-NPKFHLH 60

Query: 67  HCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGG 126
           + D+S+   +  ++     +  + D +YN   +      S +       E   +V+ + G
Sbjct: 61  YGDLSDTSNLTRIL-----REVQPDEVYNLGAM------SHVAVSFESPEYTADVDAM-G 108

Query: 127 FLGAKHAARVMVPQQKGCILFTASAC----------TEIAGLG--SPAYTISKYGILGLV 174
            L    A R +  ++K      +++            E       SP Y ++K     + 
Sbjct: 109 TLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSP-YAVAKLYAYWIT 167

Query: 175 KCLAAELGQYGIRVNCVSPYG 195
                  G Y       +   
Sbjct: 168 VNYRESYGMYACNGILFNHES 188

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 43.5 bits (101), Expect = 1e-05
 Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 9/87 (10%)

Query: 16 KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL----GQDVCYIHCDIS 71
          K+ ++TGGA  IG+  V    ENG   V+AD       D   +L       + +   D+ 
Sbjct: 2  KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLC 61

Query: 72 NEDEVINLVDTAVSKFGKLDIMYNNAG 98
          +   +  +      K  K+D + + AG
Sbjct: 62 DRKGLEKVF-----KEYKIDSVIHFAG 83

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score = 42.9 bits (100), Expect = 2e-05
 Identities = 31/216 (14%), Positives = 63/216 (29%), Gaps = 23/216 (10%)

Query: 19  IITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVIN 78
            I G    +G+       + G   ++   +D+L  +L D       +    I   D+V  
Sbjct: 6   FIAGHRGMVGSAIRRQLEQRGDVELVLRTRDEL--NLLDSRAVHDFFASERI---DQVYL 60

Query: 79  LVDTAV----SKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAA 134
                     +     D +Y N  I       I    ++D+ +L+ + +   +       
Sbjct: 61  AAAKVGGIVANNTYPADFIYQNMMI---ESNIIHAAHQNDVNKLLFLGSSCIYPKLAK-- 115

Query: 135 RVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPY 194
               P  +  +L        +     P Y I+K   + L +    + G+    V   + Y
Sbjct: 116 ---QPMAESELL-----QGTLEPTNEP-YAIAKIAGIKLCESYNRQYGRDYRSVMPTNLY 166

Query: 195 GLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDG 230
           G               +     +    K   +   G
Sbjct: 167 GPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWG 202

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 42.9 bits (99), Expect = 2e-05
 Identities = 11/66 (16%), Positives = 23/66 (34%), Gaps = 2/66 (3%)

Query: 15 GKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLAD--KLGQDVCYIHCDISN 72
          GK   +TG     G          GA V    +       L +  ++   +     DI +
Sbjct: 8  GKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRD 67

Query: 73 EDEVIN 78
          +++++ 
Sbjct: 68 QNKLLE 73

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 40.8 bits (94), Expect = 1e-04
 Identities = 15/66 (22%), Positives = 26/66 (39%), Gaps = 3/66 (4%)

Query: 16 KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLG-EDLADKLGQ--DVCYIHCDISN 72
          + A++TG     GA   +L  E G +V     +          +LG   D+ Y   D+++
Sbjct: 1  RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMAD 60

Query: 73 EDEVIN 78
             V  
Sbjct: 61 ACSVQR 66

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 40.3 bits (92), Expect = 1e-04
 Identities = 12/87 (13%), Positives = 22/87 (25%), Gaps = 20/87 (22%)

Query: 15 GKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL--------------- 59
          G   ++ GG    G        +   +V I D   +   D    L               
Sbjct: 1  GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISR 60

Query: 60 -----GQDVCYIHCDISNEDEVINLVD 81
               G+ +     DI + + +     
Sbjct: 61 WKALTGKSIELYVGDICDFEFLAESFK 87

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

 Score = 38.8 bits (88), Expect = 4e-04
 Identities = 14/65 (21%), Positives = 21/65 (32%), Gaps = 4/65 (6%)

Query: 16 KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQD-VCYIHCDISNED 74
          +V +I G    IG    E         V     D   + ++  L      ++  DIS   
Sbjct: 2  RV-LILGVNGFIGNHLTERLLREDHYEVYGL--DIGSDAISRFLNHPHFHFVEGDISIHS 58

Query: 75 EVINL 79
          E I  
Sbjct: 59 EWIEY 63

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score = 38.9 bits (89), Expect = 4e-04
 Identities = 16/69 (23%), Positives = 33/69 (47%), Gaps = 4/69 (5%)

Query: 16 KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLG--EDLADKLG-QDVCYIHCDISN 72
          K+ +ITGG   +G+         G  +++ D   + G  ++L       +  ++H DI N
Sbjct: 2  KL-LITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRN 60

Query: 73 EDEVINLVD 81
          +++V  L+ 
Sbjct: 61 KNDVTRLIT 69

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 37.8 bits (87), Expect = 8e-04
 Identities = 46/204 (22%), Positives = 70/204 (34%), Gaps = 35/204 (17%)

Query: 19  IITGGASGIGAMAVELFHENGAKVVIADVQDKLG-----EDLADKLGQD-VCYIHCDISN 72
           +ITGGA  IG+  V    +N    V+    DKL      E L+D    +   + H DI +
Sbjct: 4   LITGGAGFIGSAVVRHIIKNTQDTVVNI--DKLTYAGNLESLSDISESNRYNFEHADICD 61

Query: 73  E------------DEVINL---VDTAVSKFGKLDIMYNNAGI------LDRSFGSILDTP 111
                        D V++L        S  G    +  N         + R + S L   
Sbjct: 62  SAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGED 121

Query: 112 KSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGIL 171
           K +  R  +++T   +    H       + +  +       T      SP Y+ SK    
Sbjct: 122 KKNNFRFHHISTDEVYGDLPH-----PDEVENSVTLPLFTETTAYAPSSP-YSASKASSD 175

Query: 172 GLVKCLAAELGQYGIRVNCVSPYG 195
            LV+      G   I  NC + YG
Sbjct: 176 HLVRAWRRTYGLPTIVTNCSNNYG 199

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 37.9 bits (86), Expect = 9e-04
 Identities = 14/68 (20%), Positives = 25/68 (36%), Gaps = 5/68 (7%)

Query: 14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDL-----ADKLGQDVCYIHC 68
          EG + ++TG    + +  VE   E+G KV           +L     A   G+    +  
Sbjct: 10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVE 69

Query: 69 DISNEDEV 76
          D+  +   
Sbjct: 70 DMLKQGAY 77

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.9 bits (85), Expect = 0.001
 Identities = 33/192 (17%), Positives = 65/192 (33%), Gaps = 34/192 (17%)

Query: 16  KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDE 75
           K  +ITGGA  +G+   +    +G +V +    D         +   + + + ++ N D 
Sbjct: 2   KRILITGGAGFVGSHLTDKLMMDGHEVTVV---DNFFTGRKRNVEHWIGHENFELINHDV 58

Query: 76  VINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAAR 135
           V  L       + ++D +Y+ A        +       +  + +  NTIG       A R
Sbjct: 59  VEPL-------YIEVDQIYHLASP------ASPPNYMYNPIKTLKTNTIGTLNMLGLAKR 105

Query: 136 VMVPQQKGCILFTASACT-----------EIAGLGSPAYTISKYGILGLV--KCLAAELG 182
           V        +L  +++             +  G  +P    + Y     V      A + 
Sbjct: 106 VGAR-----LLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMK 160

Query: 183 QYGIRVNCVSPY 194
           Q G+ V     +
Sbjct: 161 QEGVEVRVARIF 172

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} Length = 335

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

 Score = 36.9 bits (84), Expect = 0.002
 Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 2/38 (5%)

Query: 16 KVAIITGGASGIGAMAVELFHEN-GAKVVIADVQDKLG 52
          K+AII  G SG+   A  L  E    +V + + +   G
Sbjct: 6  KIAIIGAGPSGL-VTAKALLAEKAFDQVTLFERRGSPG 42

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 36.9 bits (84), Expect = 0.002
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 6/66 (9%)

Query: 19 IITGGASGIGAMAVELFHENGAKVVIADVQDKLG-----EDLADKLGQDVCYIHCDISNE 73
          I+TGGA  IG+  V   + N   V +  + DKL       +L   LG  V  +  DI++ 
Sbjct: 6  IVTGGAGFIGSNFVHYVYNNHPDVHVTVL-DKLTYAGNKANLEAILGDRVELVVGDIADA 64

Query: 74 DEVINL 79
          + V  L
Sbjct: 65 ELVDKL 70

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 36.1 bits (82), Expect = 0.003
 Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 8/71 (11%)

Query: 16 KVAIITGGASGIGAMAVELFHENGAKVVIAD--------VQDKLGEDLADKLGQDVCYIH 67
          KV +ITG A  IG+  +E   +   KVV  D          D++   +++K   +  +I 
Sbjct: 17 KVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQ 76

Query: 68 CDISNEDEVIN 78
           DI N D+  N
Sbjct: 77 GDIRNLDDCNN 87

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	272
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	100.0
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	100.0
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	100.0
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	100.0
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	100.0
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	100.0
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	100.0
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	100.0
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	100.0
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	100.0
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	100.0
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	100.0
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	100.0
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	100.0
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	100.0
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	100.0
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	100.0
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	100.0
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	100.0
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	100.0
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	100.0
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	100.0
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	100.0
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	100.0
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	100.0
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	100.0
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	100.0
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	100.0
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	100.0
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	100.0
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	100.0
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	100.0
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	100.0
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	100.0
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	100.0
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	100.0
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	100.0
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	100.0
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	100.0
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	100.0
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	100.0
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	100.0
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	100.0
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	100.0
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	100.0
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	100.0
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	100.0
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	100.0
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	100.0
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	100.0
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	100.0
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	100.0
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	100.0
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	100.0
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	100.0
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	100.0
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	100.0
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	100.0
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	100.0
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	100.0
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	100.0
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	100.0
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	100.0
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.98
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.9
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.84
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.84
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.83
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.82
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.82
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.82
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.8
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.8
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.8
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.79
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.78
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.78
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.78
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.78
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.77
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.77
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.76
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.75
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.75
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.75
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.71
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.7
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.69
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.54
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.5
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.49
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.43
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.37
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.34
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.31
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.93
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	98.21
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	98.09
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	98.07
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	98.05
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.04
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	98.03
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	97.99
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.95
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.88
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.84
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.79
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.75
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.75
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.72
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.66
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.65
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	97.63
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	97.59
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	97.55
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.52
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	97.52
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.45
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.45
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	97.34
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	97.31
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.3
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.29
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	97.27
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	97.25
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	97.2
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	97.15
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	97.14
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	97.14
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	97.08
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	97.08
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	97.06
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	97.01
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	97.01
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	96.99
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	96.94
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	96.94
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	96.86
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	96.85
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	96.83
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	96.8
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	96.78
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	96.78
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	96.77
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	96.75
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.74
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	96.73
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	96.71
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	96.7
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.69
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	96.68
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	96.6
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	96.53
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	96.51
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	96.5
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	96.47
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	96.2
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	96.05
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.04
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	96.02
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	95.94
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	95.93
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	95.91
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	95.8
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	95.71
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	95.7
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	95.68
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	95.63
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	95.63
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.56
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	95.45
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	95.41
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	95.36
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.36
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	95.34
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.31
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	95.28
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	95.26
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	95.25
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	95.25
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	95.23
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	95.16
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	95.13
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	95.07
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	95.05
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	94.96
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	94.82
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	94.75
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	94.58
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	94.51
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	94.2
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	94.05
d1u0sy_	118	CheY protein {Thermotoga maritima [TaxId: 2336]}	94.0
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	94.0
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	93.87
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	93.86
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	93.76
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	93.71
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	93.54
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	93.54
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	93.36
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	93.26
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	93.16
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	93.15
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	93.12
d2fr1a2	209	Erythromycin synthase, eryAI, 1st ketoreductase mo	93.05
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	93.03
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	92.87
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	92.76
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	92.72
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	92.7
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	92.64
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	92.56
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	92.35
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	92.3
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	92.24
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	92.2
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	91.86
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	91.56
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	91.55
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	91.55
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	91.51
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	91.38
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	91.3
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	91.04
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	91.02
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	90.86
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	90.8
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	90.65
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	90.6
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	90.57
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	90.56
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	90.54
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	90.43
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	90.4
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	90.23
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	90.02
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	89.9
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	89.56
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	89.54
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	89.49
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	89.44
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	89.42
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	89.3
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	89.22
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	88.88
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	88.75
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	88.73
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	88.73
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	88.59
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	88.4
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	88.31
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	88.09
d1nv8a_	271	N5-glutamine methyltransferase, HemK {Thermotoga m	87.85
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	87.74
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	87.6
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	87.53
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	87.43
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	87.3
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	87.28
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	86.92
d1pn3a_	391	TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi	86.71
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	86.7
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	86.56
d2o14a2	208	Hypothetical protein YxiM {Bacillus subtilis [TaxI	86.19
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	85.92
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	85.45
d1qkia1	203	Glucose 6-phosphate dehydrogenase, N-terminal doma	85.15
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	84.84
d1hyqa_	232	Cell division regulator MinD {Archaeon Archaeoglob	84.73
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	84.31
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	84.26
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	83.52
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	83.47
d1v71a1	318	Hypothetical protein C320.14 (SPCC320.14, SPCC330.	83.25
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	83.12
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	82.8
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	82.73
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	82.7
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	82.27
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	82.24
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	82.18
d2csua3	163	Acetate-CoA ligase alpha chain, AcdA, domains 2 an	82.15
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	82.13
d1gsoa2	105	Glycinamide ribonucleotide synthetase (GAR-syn), N	81.91
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	81.8
d1wg8a2	182	TM0872, methyltransferase domain {Thermus thermoph	81.56
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	81.47
d1peya_	119	Sporulation response regulator Spo0F {Bacillus sub	80.88
d2fhpa1	182	Putative methylase EF2452 {Enterococcus faecalis [	80.84
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	80.67
d1h9aa1	195	Glucose 6-phosphate dehydrogenase, N-terminal doma	80.57
d1cp2a_	269	Nitrogenase iron protein {Clostridium pasteurianum	80.51
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	80.44

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=4.1e-59  Score=389.00  Aligned_cols=242  Identities=28%  Similarity=0.453  Sum_probs=225.9

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   91 (272)
                      +|+||++|||||++|||++++++|+++|++|++++|+++.++++.++++.+...+.+|++++++++++++++.+++|++|
T Consensus         1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   80 (243)
T d1q7ba_           1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVD   80 (243)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCcc
Confidence            58999999999999999999999999999999999999999999999988999999999999999999999999999999


Q ss_pred             EEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHHH
Q 024145           92 IMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGIL  171 (272)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~  171 (272)
                      +||||||....  .++.+.+.++|++++++|+.+++.++|+++|+|.+++.|+||++||..+..+.++..+|++||+|++
T Consensus        81 ilVnnAg~~~~--~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaal~  158 (243)
T d1q7ba_          81 ILVNNAGITRD--NLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLI  158 (243)
T ss_dssp             EEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHH
T ss_pred             eehhhhhhccc--cccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCCCCHHHHHHHHHHH
Confidence            99999998766  7899999999999999999999999999999999888999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccccEE
Q 024145          172 GLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNL  251 (272)
Q Consensus       172 ~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i  251 (272)
                      +|++++|.|++++||+||+|+||+++||+.+.   ..++..+......|+ +|+.+|||+|++++||+|++++++|||+|
T Consensus       159 ~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~---~~~~~~~~~~~~~pl-~R~~~pedvA~~v~fL~S~~s~~itGq~i  234 (243)
T d1q7ba_         159 GFSKSLAREVASRGITVNVVAPGFIETDMTRA---LSDDQRAGILAQVPA-GRLGGAQEIANAVAFLASDEAAYITGETL  234 (243)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT---SCHHHHHHHHTTCTT-SSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHHHHHhCccCeEEEEEecceEechhhhh---hhhhHHHHHHhcCCC-CCCCCHHHHHHHHHHHhCchhcCCcCCeE
Confidence            99999999999999999999999999999874   233333444445555 89999999999999999999999999999


Q ss_pred             EecCceee
Q 024145          252 VVDGGFSV  259 (272)
Q Consensus       252 ~~dgG~~~  259 (272)
                      .+|||.++
T Consensus       235 ~vdGG~~~  242 (243)
T d1q7ba_         235 HVNGGMYM  242 (243)
T ss_dssp             EESTTSSC
T ss_pred             EECCCeEe
Confidence            99999875

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=7.4e-58  Score=383.25  Aligned_cols=244  Identities=26%  Similarity=0.419  Sum_probs=222.6

Q ss_pred             cCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHH
Q 024145            9 PFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVS   85 (272)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (272)
                      .+++|+||++|||||++|||++++++|+++|++|++++|+++.++++.+++   +.++.++.+|++|+++++++++++.+
T Consensus         4 ~~f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   83 (251)
T d2c07a1           4 YYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILT   83 (251)
T ss_dssp             CCCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            478899999999999999999999999999999999999999888877766   56799999999999999999999999


Q ss_pred             HhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhh
Q 024145           86 KFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTI  165 (272)
Q Consensus        86 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~  165 (272)
                      ++|++|+||||||....  .++.+.+.++|++++++|+.+++.++|+++|+|.+++.|+||++||..+..+.++...|++
T Consensus        84 ~~g~iDilvnnag~~~~--~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~a  161 (251)
T d2c07a1          84 EHKNVDILVNNAGITRD--NLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSS  161 (251)
T ss_dssp             HCSCCCEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHH
T ss_pred             hcCCceeeeeccccccc--cccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCCCCHHHHH
Confidence            99999999999998766  7889999999999999999999999999999999989999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCC
Q 024145          166 SKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSY  245 (272)
Q Consensus       166 sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  245 (272)
                      ||+|+++|+|++|.|++++|||||+|+||+++|++...   .+++..+.+....|+ +|+.+|||+|++++||+|++++|
T Consensus       162 sKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~---~~~~~~~~~~~~~pl-~R~~~pedvA~~v~fL~S~~s~~  237 (251)
T d2c07a1         162 SKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDK---ISEQIKKNIISNIPA-GRMGTPEEVANLACFLSSDKSGY  237 (251)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC--------CCHHHHHHHHTTCTT-SSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHhhhhCeEEEEEccCCEecccccc---cCHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCchhCC
Confidence            99999999999999999999999999999999999873   344555555555666 89999999999999999999999


Q ss_pred             ccccEEEecCcee
Q 024145          246 VSGQNLVVDGGFS  258 (272)
Q Consensus       246 ~~G~~i~~dgG~~  258 (272)
                      +|||+|.+|||++
T Consensus       238 itG~~i~vDGG~s  250 (251)
T d2c07a1         238 INGRVFVIDGGLS  250 (251)
T ss_dssp             CCSCEEEESTTSC
T ss_pred             CcCcEEEECCCcC
Confidence            9999999999964

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=2.1e-57  Score=380.33  Aligned_cols=245  Identities=34%  Similarity=0.506  Sum_probs=220.8

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh----CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL----GQDVCYIHCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (272)
                      ++|+||++|||||++|||++++++|+++|++|++++|+.+.+++..+++    +.++.++++|++++++++++++++.++
T Consensus         1 f~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   80 (251)
T d1vl8a_           1 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEK   80 (251)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            5799999999999999999999999999999999999988776665443    678999999999999999999999999


Q ss_pred             hCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccc-cccCCCCchhhh
Q 024145           87 FGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACT-EIAGLGSPAYTI  165 (272)
Q Consensus        87 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~-~~~~~~~~~Y~~  165 (272)
                      +|++|+||||||+...  +++.+.+.++|++++++|+.+++.++|+++|+|.+++.|+||+++|..+ ..+.+....|++
T Consensus        81 ~g~iDiLVnnAG~~~~--~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~~~~~~Y~a  158 (251)
T d1vl8a_          81 FGKLDTVVNAAGINRR--HPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAA  158 (251)
T ss_dssp             HSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHHHHH
T ss_pred             cCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccccCccccchHH
Confidence            9999999999998765  7899999999999999999999999999999999999999999999766 457788899999


Q ss_pred             hHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCC
Q 024145          166 SKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSY  245 (272)
Q Consensus       166 sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  245 (272)
                      ||+|+++|++++|.|++++||+||+|+||+++|++.+.....++.. +.+....|+ +|+.+|||+|++++||+|+++++
T Consensus       159 sKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~-~~~~~~~pl-~R~~~pedvA~~v~fL~S~~a~~  236 (251)
T d1vl8a_         159 SKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKL-DYMLKRIPL-GRTGVPEDLKGVAVFLASEEAKY  236 (251)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHH-HHHHHTCTT-SSCBCGGGGHHHHHHHHSGGGTT
T ss_pred             HHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCCHHHH-HHHHhcCCC-CCCCCHHHHHHHHHHHhCchhCC
Confidence            9999999999999999999999999999999999987433333333 333444555 89999999999999999999999


Q ss_pred             ccccEEEecCceee
Q 024145          246 VSGQNLVVDGGFSV  259 (272)
Q Consensus       246 ~~G~~i~~dgG~~~  259 (272)
                      +|||+|.||||++.
T Consensus       237 itG~~i~vDGG~ta  250 (251)
T d1vl8a_         237 VTGQIIFVDGGWTA  250 (251)
T ss_dssp             CCSCEEEESTTGGG
T ss_pred             CcCcEEEeCcCeeC
Confidence            99999999999875

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=9.4e-58  Score=384.18  Aligned_cols=251  Identities=27%  Similarity=0.358  Sum_probs=199.8

Q ss_pred             cCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHH
Q 024145            9 PFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVS   85 (272)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (272)
                      +.++|+||++|||||++|||++++++|+++|++|++++|+++.+++..+++   +.++.++.+|++++++++++++++.+
T Consensus         2 ~~F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   81 (259)
T d1xq1a_           2 QRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSS   81 (259)
T ss_dssp             CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHH
Confidence            457899999999999999999999999999999999999998888777665   45799999999999999999999999


Q ss_pred             Hh-CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhh
Q 024145           86 KF-GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYT  164 (272)
Q Consensus        86 ~~-g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~  164 (272)
                      ++ |++|+||||||...+  .++.+.+.++|++++++|+.+++.++|+++|+|++++.|+||++||..+..+.++...|+
T Consensus        82 ~~~g~idilvnnAG~~~~--~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~  159 (259)
T d1xq1a_          82 MFGGKLDILINNLGAIRS--KPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYS  159 (259)
T ss_dssp             HHTTCCSEEEEECCC--------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHH
T ss_pred             HhCCCcccccccccccCC--CchhhCCHHHHHHHHHHHhhhheeeehhhhhccccccccccccccccccccccccccccc
Confidence            98 689999999998776  789999999999999999999999999999999988899999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCC
Q 024145          165 ISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESS  244 (272)
Q Consensus       165 ~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  244 (272)
                      +||+|+.+|+|++|.|++++||+||+|+||+++||+.....  .++..+......|+ +|+.+|||+|++++||+|++++
T Consensus       160 asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~--~~~~~~~~~~~~pl-~R~~~pedvA~~v~fL~S~~s~  236 (259)
T d1xq1a_         160 ATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVY--DDEFKKVVISRKPL-GRFGEPEEVSSLVAFLCMPAAS  236 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC----------------------------CCGGGGHHHHHHHTSGGGT
T ss_pred             ccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhc--hHHHHHHHHhCCCC-CCCcCHHHHHHHHHHHhCchhc
Confidence            99999999999999999999999999999999999987422  23333444444555 8999999999999999999999


Q ss_pred             CccccEEEecCceeeccCcc
Q 024145          245 YVSGQNLVVDGGFSVVNPTV  264 (272)
Q Consensus       245 ~~~G~~i~~dgG~~~~~~~~  264 (272)
                      |+|||+|.+|||++++...+
T Consensus       237 ~iTG~~i~vDGG~s~~g~~~  256 (259)
T d1xq1a_         237 YITGQTICVDGGLTVNGFSY  256 (259)
T ss_dssp             TCCSCEEECCCCEEETTEEE
T ss_pred             CCcCcEEEeCCCEECCCCCC
Confidence            99999999999999975544

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=100.00  E-value=2.5e-57  Score=379.22  Aligned_cols=244  Identities=31%  Similarity=0.450  Sum_probs=210.7

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcch-HHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKL-GEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      +|+||++|||||++|||++++++|+++|++|++++|++.. .++..++.+.++.++.+|++|+++++++++++.+++|++
T Consensus         2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~i   81 (247)
T d2ew8a1           2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRC   81 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence            5899999999999999999999999999999999997653 445556778899999999999999999999999999999


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHH
Q 024145           91 DIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGI  170 (272)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~  170 (272)
                      |+||||||+...  .++.+.+.++|++++++|+.+++.++|+++|+|++++.|+||++||..+..+.++...|++||+|+
T Consensus        82 DilVnnAG~~~~--~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal  159 (247)
T d2ew8a1          82 DILVNNAGIYPL--IPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAAN  159 (247)
T ss_dssp             CEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHHHHHH
T ss_pred             CEEEECCCCCCC--CChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccCcccccchhhhccH
Confidence            999999998765  789999999999999999999999999999999998899999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccccE
Q 024145          171 LGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQN  250 (272)
Q Consensus       171 ~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~  250 (272)
                      .+|++++|.|++++||+||+|+||+++|++.+..... ...........++ +|+.+|||+|++++||+|++++|+|||+
T Consensus       160 ~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~-~~~~~~~~~~~~l-~r~~~pedvA~~v~fL~S~~s~~itG~~  237 (247)
T d2ew8a1         160 IGFTRALASDLGKDGITVNAIAPSLVRTATTEASALS-AMFDVLPNMLQAI-PRLQVPLDLTGAAAFLASDDASFITGQT  237 (247)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECCC-------------------CTTSSS-CSCCCTHHHHHHHHHHTSGGGTTCCSCE
T ss_pred             HHHHHHHHHHhcccCeEEEEEeeCCCCCccccccccc-hhHHHHHHHhccC-CCCCCHHHHHHHHHHHhCchhcCCcCCe
Confidence            9999999999999999999999999999998743211 1111122222344 8999999999999999999999999999


Q ss_pred             EEecCceee
Q 024145          251 LVVDGGFSV  259 (272)
Q Consensus       251 i~~dgG~~~  259 (272)
                      |.+|||+..
T Consensus       238 i~vDGG~~~  246 (247)
T d2ew8a1         238 LAVDGGMVR  246 (247)
T ss_dssp             EEESSSCCC
T ss_pred             EEECCCEec
Confidence            999999864

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=1.6e-57  Score=379.14  Aligned_cols=240  Identities=38%  Similarity=0.548  Sum_probs=223.3

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      .+|+||++|||||++|||++++++|+++|++|++++|+++.++++.++++.++.++++|++|+++++++++++.+++|++
T Consensus         2 G~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   81 (244)
T d1nffa_           2 GRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGL   81 (244)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            46899999999999999999999999999999999999999999999998899999999999999999999999999999


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHH
Q 024145           91 DIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGI  170 (272)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~  170 (272)
                      |+||||||....  .++.+.+.++|++++++|+.+++.++|++.|+|.++++|+||++||..+..+.++...|++||+|+
T Consensus        82 dilinnAG~~~~--~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal  159 (244)
T d1nffa_          82 HVLVNNAGILNI--GTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAV  159 (244)
T ss_dssp             CEEEECCCCCCC--BCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHH
T ss_pred             eEEEECCcccCC--CchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccccccccchhhHHHHH
Confidence            999999998766  789999999999999999999999999999999998899999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccccE
Q 024145          171 LGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQN  250 (272)
Q Consensus       171 ~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~  250 (272)
                      ++|+|++|.|++++||+||+|+||+++||+.....   +.     ....|+ +|+.+|||+|++++||+|++++++|||+
T Consensus       160 ~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~---~~-----~~~~pl-~R~~~p~diA~~v~fL~s~~s~~itG~~  230 (244)
T d1nffa_         160 RGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVP---ED-----IFQTAL-GRAAEPVEVSNLVVYLASDESSYSTGAE  230 (244)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSC---TT-----CSCCSS-SSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhh---HH-----HHhccc-cCCCCHHHHHHHHHHHhChhhCCCcCCE
Confidence            99999999999999999999999999999986321   11     112344 8999999999999999999999999999


Q ss_pred             EEecCceeecc
Q 024145          251 LVVDGGFSVVN  261 (272)
Q Consensus       251 i~~dgG~~~~~  261 (272)
                      |.||||+....
T Consensus       231 i~vDGG~~ag~  241 (244)
T d1nffa_         231 FVVDGGTVAGL  241 (244)
T ss_dssp             EEESTTGGGSC
T ss_pred             EEECCCeeccc
Confidence            99999998653

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=100.00  E-value=7e-58  Score=383.43  Aligned_cols=247  Identities=36%  Similarity=0.483  Sum_probs=225.2

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      .+|+||++|||||++|||++++++|+++|++|++++|+++.+++..++++.++.++++|++++++++++++++.+++|++
T Consensus         1 ndL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   80 (254)
T d1hdca_           1 NDLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSV   80 (254)
T ss_dssp             CCCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCc
Confidence            36899999999999999999999999999999999999999999999998899999999999999999999999999999


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHH
Q 024145           91 DIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGI  170 (272)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~  170 (272)
                      |+||||||+...  .++.+.+.++|++++++|+.+++.++|+++|+|++++.|+||++||..+..+.++...|++||+|+
T Consensus        81 DilVnnAg~~~~--~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaal  158 (254)
T d1hdca_          81 DGLVNNAGISTG--MFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGV  158 (254)
T ss_dssp             CEEEECCCCCCC--SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred             cEEEecCccccc--cccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccccchhhHHHHHHHH
Confidence            999999998766  789999999999999999999999999999999988899999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCC-ChHhHHHHHHHHhcCCCCCcccc
Q 024145          171 LGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFL-KTDGIANAALYLASDESSYVSGQ  249 (272)
Q Consensus       171 ~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~dva~~~~~l~s~~~~~~~G~  249 (272)
                      ++|++++|.|++++||+||+|+||+++|++.......   ..+......|+ +|+. .|||+|++++||+|++++|+|||
T Consensus       159 ~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~~~~~~~---~~~~~~~~~pl-~R~g~~PedvA~~v~fL~S~~a~~itG~  234 (254)
T d1hdca_         159 RGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIR---QGEGNYPNTPM-GRVGNEPGEIAGAVVKLLSDTSSYVTGA  234 (254)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCC---CSTTSCTTSTT-SSCB-CHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHhCCCceEEEEeeeCcccCccchhcCHH---HHHHHHhCCCC-CCCCCCHHHHHHHHHHHhchhhCCCCCc
Confidence            9999999999999999999999999999987642211   11122233444 7776 69999999999999999999999


Q ss_pred             EEEecCceeeccCcc
Q 024145          250 NLVVDGGFSVVNPTV  264 (272)
Q Consensus       250 ~i~~dgG~~~~~~~~  264 (272)
                      +|.+|||++.. |.+
T Consensus       235 ~i~vDGG~t~g-p~~  248 (254)
T d1hdca_         235 ELAVDGGWTTG-PTV  248 (254)
T ss_dssp             EEEESTTTTTS-CCH
T ss_pred             eEEeCCCccCC-CCc
Confidence            99999999875 655

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=100.00  E-value=2.6e-56  Score=377.64  Aligned_cols=254  Identities=48%  Similarity=0.803  Sum_probs=227.7

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhC--CceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLG--QDVCYIHCDISNEDEVINLVDTAVSKFGK   89 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (272)
                      +|+||++|||||++|||++++++|+++|++|++++|+++.++++.++++  ..+.++.+|++|+++++++++++.+++|+
T Consensus         3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (268)
T d2bgka1           3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGK   82 (268)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            6899999999999999999999999999999999999999998888874  46888999999999999999999999999


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCC-chhhhhHH
Q 024145           90 LDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGS-PAYTISKY  168 (272)
Q Consensus        90 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~-~~Y~~sK~  168 (272)
                      +|+||||||.....+..+.+.+.++|++++++|+.+++.++|+++|+|.+++.|+||++||..+..+.++. ..|++||+
T Consensus        83 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~~Y~asKa  162 (268)
T d2bgka1          83 LDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKH  162 (268)
T ss_dssp             CCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHHHHHHH
T ss_pred             cceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccccccccccccccchhHH
Confidence            99999999987664456889999999999999999999999999999999899999999999988876654 48999999


Q ss_pred             HHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCCh-hHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCcc
Q 024145          169 GILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDP-ALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVS  247 (272)
Q Consensus       169 a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  247 (272)
                      |+++|++++|.|++++||+||+|+||+++||+........ +...+......++.+|+.+|||+|++++||+|++++|+|
T Consensus       163 al~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL~S~~s~~it  242 (268)
T d2bgka1         163 AVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDESKYVS  242 (268)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhccccCCCCcCHHHHHHHHHHHhChhhCCcc
Confidence            9999999999999999999999999999999987654333 333333334444558999999999999999999999999


Q ss_pred             ccEEEecCceeeccCccc
Q 024145          248 GQNLVVDGGFSVVNPTVM  265 (272)
Q Consensus       248 G~~i~~dgG~~~~~~~~~  265 (272)
                      ||+|.||||++...|.+-
T Consensus       243 Gq~i~VDGG~t~~~p~~p  260 (268)
T d2bgka1         243 GLNLVIDGGYTRTNPAFP  260 (268)
T ss_dssp             SCEEEESTTGGGCCTHHH
T ss_pred             CceEEECcCcccCCCCCh
Confidence            999999999999888664

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=100.00  E-value=3.5e-57  Score=380.47  Aligned_cols=246  Identities=28%  Similarity=0.453  Sum_probs=220.9

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh-----CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL-----GQDVCYIHCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (272)
                      +|+||++|||||++|||++++++|+++|++|++++|+++.+++..+++     +.++..+++|++|+++++++++++.++
T Consensus         1 rl~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~   80 (258)
T d1iy8a_           1 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER   80 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHH
Confidence            589999999999999999999999999999999999998877666544     457899999999999999999999999


Q ss_pred             hCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhh
Q 024145           87 FGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTIS  166 (272)
Q Consensus        87 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~s  166 (272)
                      +|++|+||||||+..+ ..++.+.+.++|++++++|+.+++.++|+++|+|+++++|+||++||..+..+.+....|++|
T Consensus        81 ~G~iDiLVnnAG~~~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~as  159 (258)
T d1iy8a_          81 FGRIDGFFNNAGIEGK-QNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAA  159 (258)
T ss_dssp             HSCCSEEEECCCCCCC-CBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHHHHH
T ss_pred             hCCCCEEEECCccccc-CCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCCCCchHHHHH
Confidence            9999999999997654 267889999999999999999999999999999998899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCC-----CCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcC
Q 024145          167 KYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKG-----GVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASD  241 (272)
Q Consensus       167 K~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  241 (272)
                      |+|+.+|++++|.|++++||+||+|+||+++|||.+..     ....+...+.+....|+ +|+.+|||+|++++||+|+
T Consensus       160 Kaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl-~R~~~p~dvA~~v~fL~S~  238 (258)
T d1iy8a_         160 KHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPS-KRYGEAPEIAAVVAFLLSD  238 (258)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTT-CSCBCHHHHHHHHHHHTSG
T ss_pred             HHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCc
Confidence            99999999999999999999999999999999986532     12223333334444555 8999999999999999999


Q ss_pred             CCCCccccEEEecCceee
Q 024145          242 ESSYVSGQNLVVDGGFSV  259 (272)
Q Consensus       242 ~~~~~~G~~i~~dgG~~~  259 (272)
                      +++++|||+|.||||++.
T Consensus       239 ~s~~itG~~i~VDGG~sa  256 (258)
T d1iy8a_         239 DASYVNATVVPIDGGQSA  256 (258)
T ss_dssp             GGTTCCSCEEEESTTTTT
T ss_pred             hhcCCcCceEEcCcchhc
Confidence            999999999999999874

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=100.00  E-value=1.3e-56  Score=375.57  Aligned_cols=244  Identities=33%  Similarity=0.474  Sum_probs=220.3

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhC--CceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLG--QDVCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      .+|+||++|||||++|||++++++|+++|++|++++|+++.++++.+++.  .++.++.+|++|+++++++++++.+++|
T Consensus         2 nrL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   81 (251)
T d1zk4a1           2 NRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFG   81 (251)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            35899999999999999999999999999999999999998888888773  5799999999999999999999999999


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCc-eEEEEecccccccCCCCchhhhhH
Q 024145           89 KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKG-CILFTASACTEIAGLGSPAYTISK  167 (272)
Q Consensus        89 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g-~iv~iss~~~~~~~~~~~~Y~~sK  167 (272)
                      ++|+||||||...+  +++.+.+.++|++++++|+.+++.++|+++|+|.+++.| +||++||..+..+.+....|++||
T Consensus        82 ~iDiLVnnAg~~~~--~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~~~~~Y~asK  159 (251)
T d1zk4a1          82 PVSTLVNNAGIAVN--KSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASK  159 (251)
T ss_dssp             SCCEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CceEEEeccccccc--cchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCCCchhHHHHH
Confidence            99999999998776  789999999999999999999999999999999987754 899999999999999999999999


Q ss_pred             HHHHHHHHHHHHH--hcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCC
Q 024145          168 YGILGLVKCLAAE--LGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSY  245 (272)
Q Consensus       168 ~a~~~~~~~la~e--~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  245 (272)
                      +|+.+|++++|.|  ++++||+||+|+||+++||+..... ..+. ........|+ +|+.+|||+|++++||+|++++|
T Consensus       160 aal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~-~~~~-~~~~~~~~pl-~R~~~pedvA~~v~fL~S~~s~~  236 (251)
T d1zk4a1         160 GAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLP-GAEE-AMSQRTKTPM-GHIGEPNDIAYICVYLASNESKF  236 (251)
T ss_dssp             HHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTST-THHH-HHTSTTTCTT-SSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcC-CHHH-HHHHHhCCCC-CCCcCHHHHHHHHHHHhCchhCC
Confidence            9999999999998  5789999999999999999987422 2222 2222233444 89999999999999999999999


Q ss_pred             ccccEEEecCceee
Q 024145          246 VSGQNLVVDGGFSV  259 (272)
Q Consensus       246 ~~G~~i~~dgG~~~  259 (272)
                      +|||+|.+|||++.
T Consensus       237 itG~~i~vDGG~ta  250 (251)
T d1zk4a1         237 ATGSEFVVDGGYTA  250 (251)
T ss_dssp             CCSCEEEESTTGGG
T ss_pred             CcCcEEEECccccc
Confidence            99999999999875

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.6e-56  Score=373.06  Aligned_cols=240  Identities=36%  Similarity=0.535  Sum_probs=219.2

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      ++|+||++|||||++|||++++++|+++|++|++++|+++.+++..++++  ..++.||++|+++++++++++.+++|++
T Consensus         1 M~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~~--~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   78 (242)
T d1ulsa_           1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVG--AHPVVMDVADPASVERGFAEALAHLGRL   78 (242)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTT--CEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC--CeEEEEecCCHHHHHHHHHHHHHhcCCc
Confidence            35899999999999999999999999999999999999998888887764  5788999999999999999999999999


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHH
Q 024145           91 DIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGI  170 (272)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~  170 (272)
                      |+||||||+..+  +++.+.+.++|++++++|+.+++.++|+++|+|.+++.++++++|| .+..+.++..+|++||+|+
T Consensus        79 DilVnnAG~~~~--~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss-~~~~~~~~~~~Y~asKaal  155 (242)
T d1ulsa_          79 DGVVHYAGITRD--NFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTAS-RVYLGNLGQANYAASMAGV  155 (242)
T ss_dssp             CEEEECCCCCCC--CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECC-GGGGCCTTCHHHHHHHHHH
T ss_pred             eEEEECCccccc--CchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeecc-ccccCCCCCcchHHHHHHH
Confidence            999999998766  7899999999999999999999999999999999888888887776 4567888999999999999


Q ss_pred             HHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccccE
Q 024145          171 LGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQN  250 (272)
Q Consensus       171 ~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~  250 (272)
                      ++|++++|.|++++|||||+|+||+++|++...   .++...+......|+ +|+.+|||+|++++||+|++++|+|||+
T Consensus       156 ~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~---~~~~~~~~~~~~~pl-~R~~~pedia~~v~fL~S~~s~~itG~~  231 (242)
T d1ulsa_         156 VGLTRTLALELGRWGIRVNTLAPGFIETRMTAK---VPEKVREKAIAATPL-GRAGKPLEVAYAALFLLSDESSFITGQV  231 (242)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSS---SCHHHHHHHHHTCTT-CSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHHHhhhCcEEEEEeeCcccChhhhc---CCHHHHHHHHhcCCC-CCCCCHHHHHHHHHHHhchhhCCCCCcE
Confidence            999999999999999999999999999999873   344444555555666 8999999999999999999999999999


Q ss_pred             EEecCceee
Q 024145          251 LVVDGGFSV  259 (272)
Q Consensus       251 i~~dgG~~~  259 (272)
                      |.+|||+++
T Consensus       232 i~vDGG~t~  240 (242)
T d1ulsa_         232 LFVDGGRTI  240 (242)
T ss_dssp             EEESTTTTT
T ss_pred             EEECCCccC
Confidence            999999876

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.1e-56  Score=376.89  Aligned_cols=243  Identities=35%  Similarity=0.467  Sum_probs=221.7

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (272)
                      -++|+||++|||||++|||++++++|+++|++|++++|+++.++++.+++   +.++.++++|++++++++++++++.++
T Consensus         6 ~m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~   85 (255)
T d1fmca_           6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISK   85 (255)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999998888777665   568999999999999999999999999


Q ss_pred             hCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhh
Q 024145           87 FGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTIS  166 (272)
Q Consensus        87 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~s  166 (272)
                      +|++|+||||||+..+  .++ +.+.++|++++++|+.+++.++|+++|+|.+++.|+||++||..+..+.++...|++|
T Consensus        86 ~g~iDilvnnAG~~~~--~~~-e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~~~~~~Y~as  162 (255)
T d1fmca_          86 LGKVDILVNNAGGGGP--KPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASS  162 (255)
T ss_dssp             HSSCCEEEECCCCCCC--CCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHH
T ss_pred             cCCCCEeeeCCcCCCC--Ccc-cCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhccccccccchhH
Confidence            9999999999998765  444 7899999999999999999999999999999899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCc
Q 024145          167 KYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYV  246 (272)
Q Consensus       167 K~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  246 (272)
                      |+|+++|+|++|.|++++||+||+|+||+++|++....  ..++..+......|+ +|+.+|||+|++++||+|++++|+
T Consensus       163 Kaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~--~~~e~~~~~~~~~pl-~R~g~pedvA~~v~fL~S~~s~~i  239 (255)
T d1fmca_         163 KAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSV--ITPEIEQKMLQHTPI-RRLGQPQDIANAALFLCSPAASWV  239 (255)
T ss_dssp             HHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT--CCHHHHHHHHHTCSS-CSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhcc--CCHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCchhcCC
Confidence            99999999999999999999999999999999998742  233444444555566 899999999999999999999999


Q ss_pred             cccEEEecCcee
Q 024145          247 SGQNLVVDGGFS  258 (272)
Q Consensus       247 ~G~~i~~dgG~~  258 (272)
                      |||+|.+|||..
T Consensus       240 tG~~i~vDGG~~  251 (255)
T d1fmca_         240 SGQILTVSGGGV  251 (255)
T ss_dssp             CSCEEEESTTSC
T ss_pred             cCCEEEECcCcc
Confidence            999999999974

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=100.00  E-value=6.7e-57  Score=378.61  Aligned_cols=246  Identities=26%  Similarity=0.420  Sum_probs=223.4

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      ++|+||++|||||++|||++++++|+++|++|++++|+.+.++++.++++.++.++.+|++++++++++++++.+++|++
T Consensus         1 M~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~i   80 (256)
T d1k2wa_           1 MRLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSI   80 (256)
T ss_dssp             CTTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCc
Confidence            35899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCC-CCceEEEEecccccccCCCCchhhhhHHH
Q 024145           91 DIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQ-QKGCILFTASACTEIAGLGSPAYTISKYG  169 (272)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~iss~~~~~~~~~~~~Y~~sK~a  169 (272)
                      |+||||||+...  +++.+.+.++|++.+++|+.+++.++|+++|+|.++ +.|+||++||..+..+.+....|++||+|
T Consensus        81 DilVnnAg~~~~--~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa  158 (256)
T d1k2wa_          81 DILVNNAALFDL--APIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAA  158 (256)
T ss_dssp             CEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             cEEEeecccccc--cccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccccccccchhhhhhH
Confidence            999999998765  789999999999999999999999999999987554 57999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCC--------CChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcC
Q 024145          170 ILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGG--------VDPALIESSMSQMGNLKGEFLKTDGIANAALYLASD  241 (272)
Q Consensus       170 ~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  241 (272)
                      +++|++++|.|++++||+||+|+||+++||+.....        ...++..+.+....|+ +|+.+|||+|++++||+|+
T Consensus       159 l~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl-gR~~~p~evA~~v~fL~S~  237 (256)
T d1k2wa_         159 VISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPF-GRMGRAEDLTGMAIFLATP  237 (256)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTT-SSCBCHHHHHHHHHHTTSG
T ss_pred             HHHHHHHHHHHhcccCeEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCc
Confidence            999999999999999999999999999999865210        1112233334444566 8999999999999999999


Q ss_pred             CCCCccccEEEecCceee
Q 024145          242 ESSYVSGQNLVVDGGFSV  259 (272)
Q Consensus       242 ~~~~~~G~~i~~dgG~~~  259 (272)
                      +++++|||+|.+|||.++
T Consensus       238 ~a~~iTG~~i~vDGG~~m  255 (256)
T d1k2wa_         238 EADYIVAQTYNVDGGNWM  255 (256)
T ss_dssp             GGTTCCSCEEEESTTSSC
T ss_pred             hhCCccCceEEECcchhh
Confidence            999999999999999875

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=100.00  E-value=1e-56  Score=377.94  Aligned_cols=248  Identities=29%  Similarity=0.348  Sum_probs=224.9

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (272)
                      .++|+||++|||||++|||++++++|+++|++|++++|+++.+++..+++   +.++.++.+|++|+++++++++++.++
T Consensus         3 ~f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (259)
T d2ae2a_           3 RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANH   82 (259)
T ss_dssp             TTCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999999999888877766   567899999999999999999999999


Q ss_pred             hC-CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhh
Q 024145           87 FG-KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTI  165 (272)
Q Consensus        87 ~g-~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~  165 (272)
                      ++ ++|++|||||+...  .++.+.+.++|++++++|+.+++.++|+++|+|.++++|+||++||..+..+.++...|++
T Consensus        83 ~~~~idilvnnAG~~~~--~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~a  160 (259)
T d2ae2a_          83 FHGKLNILVNNAGIVIY--KEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGA  160 (259)
T ss_dssp             TTTCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             hCCCceEEEECCceecc--CccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccccccccccchHH
Confidence            86 79999999998766  7899999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChh--HHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCC
Q 024145          166 SKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPA--LIESSMSQMGNLKGEFLKTDGIANAALYLASDES  243 (272)
Q Consensus       166 sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  243 (272)
                      ||+|+++|+|++|.|++++||+||+|+||+++||+.+.....++  +..+.+....|+ +|+.+|||+|++++||+|+++
T Consensus       161 sKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl-~R~g~pedvA~~v~fL~S~~s  239 (259)
T d2ae2a_         161 TKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCAL-RRMGEPKELAAMVAFLCFPAA  239 (259)
T ss_dssp             HHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTT-CSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCchh
Confidence            99999999999999999999999999999999998764333322  222233344555 899999999999999999999


Q ss_pred             CCccccEEEecCceeec
Q 024145          244 SYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       244 ~~~~G~~i~~dgG~~~~  260 (272)
                      +|+|||+|.||||++.+
T Consensus       240 ~~itG~~i~VDGG~~a~  256 (259)
T d2ae2a_         240 SYVTGQIIYVDGGLMAN  256 (259)
T ss_dssp             TTCCSCEEEESTTGGGC
T ss_pred             CCCcCcEEEECCCeEee
Confidence            99999999999998775

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=100.00  E-value=9.3e-57  Score=378.74  Aligned_cols=244  Identities=31%  Similarity=0.439  Sum_probs=212.4

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCc-chHHHHHHH----hCCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQD-KLGEDLADK----LGQDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~-~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      |+||++|||||++|||+++|++|+++|++|++++|++ +..+++.++    .+.++.++.+|++|+++++++++++.+++
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            6899999999999999999999999999999999975 445544433    36789999999999999999999999999


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhH
Q 024145           88 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISK  167 (272)
Q Consensus        88 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK  167 (272)
                      |++|+||||||+...  +++.+.+.++|+++|++|+.+++.++|+++|+|++++.|+||++||..+..+.++...|++||
T Consensus        82 G~iDiLVnnAG~~~~--~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asK  159 (260)
T d1x1ta1          82 GRIDILVNNAGIQHT--ALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAK  159 (260)
T ss_dssp             SCCSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCCcEEEeecccccC--CchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceeccCCcchhhhhh
Confidence            999999999998766  789999999999999999999999999999999998899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCC---------hhHHHHHHhhcCCCCCCCCChHhHHHHHHHH
Q 024145          168 YGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVD---------PALIESSMSQMGNLKGEFLKTDGIANAALYL  238 (272)
Q Consensus       168 ~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  238 (272)
                      +|+++|++++|.|++++||+||+|+||+++||+.......         .+...+.+....|+ +|+.+|||+|++++||
T Consensus       160 aal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl-~R~g~pediA~~v~fL  238 (260)
T d1x1ta1         160 HGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPS-LQFVTPEQLGGTAVFL  238 (260)
T ss_dssp             HHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTT-CCCBCHHHHHHHHHHH
T ss_pred             hhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhcCCC-CCCcCHHHHHHHHHHH
Confidence            9999999999999999999999999999999997643211         01112223444555 8999999999999999


Q ss_pred             hcCCCCCccccEEEecCceee
Q 024145          239 ASDESSYVSGQNLVVDGGFSV  259 (272)
Q Consensus       239 ~s~~~~~~~G~~i~~dgG~~~  259 (272)
                      +|++++++|||+|.+|||++.
T Consensus       239 ~S~~a~~itG~~i~vDGG~ta  259 (260)
T d1x1ta1         239 ASDAAAQITGTTVSVDGGWTA  259 (260)
T ss_dssp             HSGGGTTCCSCEEEESTTGGG
T ss_pred             hChhhCCCcCCEEEECcchhc
Confidence            999999999999999999865

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=100.00  E-value=9e-57  Score=378.45  Aligned_cols=251  Identities=33%  Similarity=0.485  Sum_probs=222.4

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcc-hHHHHHHH---hCCceEEEEecCCCHHHHHHHHHHHHHH
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDK-LGEDLADK---LGQDVCYIHCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~-~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (272)
                      .+|+||++|||||++|||++++++|+++|++|++++|+.+ ..+++.++   .+.++.++++|++|+++++++++++.++
T Consensus         3 ~dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (261)
T d1geea_           3 KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKE   82 (261)
T ss_dssp             GGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4699999999999999999999999999999999999864 44555444   3678999999999999999999999999


Q ss_pred             hCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCc-eEEEEecccccccCCCCchhhh
Q 024145           87 FGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKG-CILFTASACTEIAGLGSPAYTI  165 (272)
Q Consensus        87 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g-~iv~iss~~~~~~~~~~~~Y~~  165 (272)
                      +|++|+||||||+..+  .++.+.+.++|++++++|+.+++.++|+++|+|.+++.| +||++||..+..+.+....|++
T Consensus        83 ~G~iDiLVnnAG~~~~--~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~~~~~Y~a  160 (261)
T d1geea_          83 FGKLDVMINNAGLENP--VSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAA  160 (261)
T ss_dssp             HSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHH
T ss_pred             hCCCCEeeccceecCC--cchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCcccccccc
Confidence            9999999999998776  789999999999999999999999999999999877655 5889999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCC
Q 024145          166 SKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSY  245 (272)
Q Consensus       166 sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  245 (272)
                      ||+|+++|++++|.|++++||+||+|+||+++||+.......+ +..+......|+ +|+.+|||+|++++||+|+++++
T Consensus       161 sKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~-~~~~~~~~~~pl-~R~~~pediA~~v~fL~S~~s~~  238 (261)
T d1geea_         161 SKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADP-EQRADVESMIPM-GYIGEPEEIAAVAAWLASSEASY  238 (261)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSH-HHHHHHHTTCTT-SSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             CCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCCH-HHHHHHHhcCCC-CCCCCHHHHHHHHHHHhCchhcC
Confidence            9999999999999999999999999999999999976422222 333444455566 89999999999999999999999


Q ss_pred             ccccEEEecCceeeccCcccc
Q 024145          246 VSGQNLVVDGGFSVVNPTVMR  266 (272)
Q Consensus       246 ~~G~~i~~dgG~~~~~~~~~~  266 (272)
                      +|||+|.||||+++. |.+.+
T Consensus       239 itG~~i~vDGG~sl~-p~~~~  258 (261)
T d1geea_         239 VTGITLFADGGMTLY-PSFQA  258 (261)
T ss_dssp             CCSCEEEESTTGGGC-GGGGG
T ss_pred             CcCCeEEECCCeeCC-CCCCC
Confidence            999999999999986 54433

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=2.6e-56  Score=372.88  Aligned_cols=242  Identities=31%  Similarity=0.484  Sum_probs=216.6

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   91 (272)
                      .|+||++|||||++|||++++++|+++|++|++++|+++.. +..++++  ..++++|++|+++++++++++.+++|++|
T Consensus         2 ~l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~-~~~~~~~--~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD   78 (248)
T d2d1ya1           2 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGK-EVAEAIG--GAFFQVDLEDERERVRFVEEAAYALGRVD   78 (248)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHH-HHHHHHT--CEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHcC--CeEEEEeCCCHHHHHHHHHHHHHhcCCCC
Confidence            58999999999999999999999999999999999987754 4555655  45789999999999999999999999999


Q ss_pred             EEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHHH
Q 024145           92 IMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGIL  171 (272)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~  171 (272)
                      +||||||...+  +++.+.+.++|++++++|+.+++.++|+++|+|++++.|+||++||..+..+.+....|++||+|++
T Consensus        79 iLVnnAG~~~~--~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~  156 (248)
T d2d1ya1          79 VLVNNAAIAAP--GSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLV  156 (248)
T ss_dssp             EEEECCCCCCC--BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHHHHHH
T ss_pred             eEEEeCcCCCC--CChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccccccccchhHHHHHHHH
Confidence            99999998766  7899999999999999999999999999999999989999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCC---CChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccc
Q 024145          172 GLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGG---VDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSG  248 (272)
Q Consensus       172 ~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  248 (272)
                      +|+|++|.|++++||+||+|+||+++||+.....   ..++...+.+....|+ +|+.+|||++++++||+|++++|+||
T Consensus       157 ~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pl-~R~~~pedia~~v~fL~S~~s~~itG  235 (248)
T d2d1ya1         157 NLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHAL-RRLGKPEEVAEAVLFLASEKASFITG  235 (248)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTT-SSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCchhcCCCC
Confidence            9999999999999999999999999999865321   1223334445555566 89999999999999999999999999


Q ss_pred             cEEEecCceee
Q 024145          249 QNLVVDGGFSV  259 (272)
Q Consensus       249 ~~i~~dgG~~~  259 (272)
                      |+|.+|||++.
T Consensus       236 ~~i~vDGG~ta  246 (248)
T d2d1ya1         236 AILPVDGGMTA  246 (248)
T ss_dssp             CEEEESTTGGG
T ss_pred             cEEEcCcCccc
Confidence            99999999865

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=1.3e-56  Score=372.36  Aligned_cols=234  Identities=24%  Similarity=0.383  Sum_probs=207.2

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      .+|+||++|||||++|||++++++|+++|++|++++|+.+..        .++..+++|++|+++++++++++.+++|++
T Consensus         3 psl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~--------~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   74 (237)
T d1uzma1           3 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP--------KGLFGVEVDVTDSDAVDRAFTAVEEHQGPV   74 (237)
T ss_dssp             CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC--------TTSEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchh--------cCceEEEEecCCHHHHHHHHHHHHHhcCCc
Confidence            358999999999999999999999999999999999987653        356789999999999999999999999999


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHH
Q 024145           91 DIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGI  170 (272)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~  170 (272)
                      |+||||||...+  .++.+.+.++|++++++|+.+++.++|+++|+|.+++.|+||++||..+..+.++...|++||+|+
T Consensus        75 DiLVnnAG~~~~--~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal  152 (237)
T d1uzma1          75 EVLVSNAGLSAD--AFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGV  152 (237)
T ss_dssp             SEEEEECSCCC-------CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHHHHHHH
T ss_pred             eEEEeeeccccc--ccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCCcccHHHHHHHHHH
Confidence            999999998766  789999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccccE
Q 024145          171 LGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQN  250 (272)
Q Consensus       171 ~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~  250 (272)
                      ++|++++|.|++++||+||+|+||+++|++.+.   .++...+......|+ +|+.+|||+|++++||+|++++|+|||+
T Consensus       153 ~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~---~~~~~~~~~~~~~pl-~R~~~pedvA~~v~fL~S~~s~~itG~~  228 (237)
T d1uzma1         153 IGMARSIARELSKANVTANVVAPGYIDTDMTRA---LDERIQQGALQFIPA-KRVGTPAEVAGVVSFLASEDASYISGAV  228 (237)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH---SCHHHHHHHGGGCTT-CSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHhhhhcCCceeeeeeeCcCCChhhhc---cCHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCchhcCCcCCe
Confidence            999999999999999999999999999999873   234444445555666 8999999999999999999999999999


Q ss_pred             EEecCcee
Q 024145          251 LVVDGGFS  258 (272)
Q Consensus       251 i~~dgG~~  258 (272)
                      |.+|||.+
T Consensus       229 i~vdGG~~  236 (237)
T d1uzma1         229 IPVDGGMG  236 (237)
T ss_dssp             EEESTTTT
T ss_pred             EEECCCCC
Confidence            99999975

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=100.00  E-value=2.7e-56  Score=375.72  Aligned_cols=244  Identities=31%  Similarity=0.514  Sum_probs=221.8

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      .+|+||++|||||++|||++++++|+++|++|++++|+++.++++.+++   +.++..+.+|++++++++++++++.+++
T Consensus         1 krL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (260)
T d1zema1           1 KKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDF   80 (260)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            3689999999999999999999999999999999999998888777665   5689999999999999999999999999


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhH
Q 024145           88 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISK  167 (272)
Q Consensus        88 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK  167 (272)
                      |++|+||||||.... ..++.+.+.++|++++++|+.+++.++|+++|+|.+++.|+||++||..+..+.++...|++||
T Consensus        81 g~iDilVnnaG~~~~-~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asK  159 (260)
T d1zema1          81 GKIDFLFNNAGYQGA-FAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSK  159 (260)
T ss_dssp             SCCCEEEECCCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHHH
T ss_pred             CCCCeehhhhccccc-cCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCcchHHHHHHH
Confidence            999999999997644 2679999999999999999999999999999999998999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccC-------------CCCChhHHHHHHhhcCCCCCCCCChHhHHHH
Q 024145          168 YGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMK-------------GGVDPALIESSMSQMGNLKGEFLKTDGIANA  234 (272)
Q Consensus       168 ~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  234 (272)
                      +|+++|+|++|.|++++||+||+|+||+++|++...             ....++...+.+....|+ +|+.+|||+|++
T Consensus       160 aal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl-~R~g~pedvA~~  238 (260)
T d1zema1         160 GAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPM-RRYGDINEIPGV  238 (260)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTT-SSCBCGGGSHHH
T ss_pred             HHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcCCC-CCCcCHHHHHHH
Confidence            999999999999999999999999999999997531             112334444555555666 899999999999


Q ss_pred             HHHHhcCCCCCccccEEEecCc
Q 024145          235 ALYLASDESSYVSGQNLVVDGG  256 (272)
Q Consensus       235 ~~~l~s~~~~~~~G~~i~~dgG  256 (272)
                      ++||+|++++++|||+|.||||
T Consensus       239 v~fL~S~~s~~itG~~i~VDGG  260 (260)
T d1zema1         239 VAFLLGDDSSFMTGVNLPIAGG  260 (260)
T ss_dssp             HHHHHSGGGTTCCSCEEEESCC
T ss_pred             HHHHhCchhcCccCCeEEeCCC
Confidence            9999999999999999999998

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=2.8e-56  Score=375.20  Aligned_cols=242  Identities=25%  Similarity=0.370  Sum_probs=219.1

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      .||++|||||++|||++++++|+++|++|++++|+++.+++..+++   +.++.++++|++|+++++++++++.+++|++
T Consensus         1 DgKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~i   80 (257)
T d2rhca1           1 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPV   80 (257)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            4899999999999999999999999999999999998888777665   5689999999999999999999999999999


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhh--cCCCCceEEEEecccccccCCCCchhhhhHH
Q 024145           91 DIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVM--VPQQKGCILFTASACTEIAGLGSPAYTISKY  168 (272)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~  168 (272)
                      |+||||||+...  +++.+.+.++|++++++|+.+++.++|+++|+|  .+++.|+||+++|..+..+.++...|++||+
T Consensus        81 DilVnnAG~~~~--~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~~~~~Y~asKa  158 (257)
T d2rhca1          81 DVLVNNAGRPGG--GATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKH  158 (257)
T ss_dssp             SEEEECCCCCCC--SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CEEEecccccCC--CChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccccccchhHHHHHH
Confidence            999999998766  789999999999999999999999999999974  5567799999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCC--------CCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhc
Q 024145          169 GILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKG--------GVDPALIESSMSQMGNLKGEFLKTDGIANAALYLAS  240 (272)
Q Consensus       169 a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  240 (272)
                      |+.+|+|++|.|++++|||||+|+||+++|||....        ....++..+.+....|+ +|+.+|||+|++++||+|
T Consensus       159 al~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~Pl-gR~~~pedia~~v~fL~S  237 (257)
T d2rhca1         159 GVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPI-GRYVQPSEVAEMVAYLIG  237 (257)
T ss_dssp             HHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTT-SSCBCHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhC
Confidence            999999999999999999999999999999986531        12334444444555666 999999999999999999


Q ss_pred             CCCCCccccEEEecCcee
Q 024145          241 DESSYVSGQNLVVDGGFS  258 (272)
Q Consensus       241 ~~~~~~~G~~i~~dgG~~  258 (272)
                      ++++++|||+|.+|||++
T Consensus       238 ~~s~~itG~~i~vDGG~~  255 (257)
T d2rhca1         238 PGAAAVTAQALNVCGGLG  255 (257)
T ss_dssp             GGGTTCCSCEEEESTTCC
T ss_pred             chhcCCcCceEEECcCcc
Confidence            999999999999999974

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6e-56  Score=370.96  Aligned_cols=244  Identities=31%  Similarity=0.494  Sum_probs=217.0

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      .+|+||++|||||++|||++++++|+++|++|++++|+++.++++.++++ +..++.+|++|+++++++++++.+++|++
T Consensus         2 ~rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~-~~~~~~~Dvs~~~~v~~~~~~~~~~~g~i   80 (250)
T d1ydea1           2 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP-GAVFILCDVTQEDDVKTLVSETIRRFGRL   80 (250)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT-TEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcC-CCeEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            36899999999999999999999999999999999999998888887775 57899999999999999999999999999


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHH
Q 024145           91 DIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGI  170 (272)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~  170 (272)
                      |+||||||.... ..++.+.+.++|++++++|+.+++.++|+++|+|++ ++|+||++||..+..+.+....|++||+|+
T Consensus        81 DilVnnAG~~~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~-~~G~Ii~isS~~~~~~~~~~~~Y~asKaal  158 (250)
T d1ydea1          81 DCVVNNAGHHPP-PQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRK-SQGNVINISSLVGAIGQAQAVPYVATKGAV  158 (250)
T ss_dssp             CEEEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HTCEEEEECCHHHHHCCTTCHHHHHHHHHH
T ss_pred             CEEEeccccccc-ccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHh-CCCCCcccccccccccccCcchhHHHHhhH
Confidence            999999997644 256789999999999999999999999999999976 469999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCC---CChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCcc
Q 024145          171 LGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGG---VDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVS  247 (272)
Q Consensus       171 ~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  247 (272)
                      ++|++++|.|++++||+||+|+||+++|||.+...   .......+......|+ +|+.+|||+|++++||+|+ ++|+|
T Consensus       159 ~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl-~R~g~p~eva~~v~fL~Sd-a~~it  236 (250)
T d1ydea1         159 TAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPL-GRMGQPAEVGAAAVFLASE-ANFCT  236 (250)
T ss_dssp             HHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTT-SSCBCHHHHHHHHHHHHHH-CTTCC
T ss_pred             HHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCCC-CCCCCHHHHHHHHHHHhCc-cCCCc
Confidence            99999999999999999999999999999875321   1122222222233455 8999999999999999986 78999


Q ss_pred             ccEEEecCceee
Q 024145          248 GQNLVVDGGFSV  259 (272)
Q Consensus       248 G~~i~~dgG~~~  259 (272)
                      ||+|.+|||+++
T Consensus       237 G~~i~vDGG~~l  248 (250)
T d1ydea1         237 GIELLVTGGAEL  248 (250)
T ss_dssp             SCEEEESTTTTS
T ss_pred             CCeEEECCCccc
Confidence            999999999875

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=4.1e-56  Score=370.99  Aligned_cols=238  Identities=29%  Similarity=0.475  Sum_probs=216.1

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCeEEEee-cCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Q 024145           16 KVAIITGGASGIGAMAVELFHENGAKVVIAD-VQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~~V~~~~-r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   91 (272)
                      +++|||||++|||++++++|+++|++|++++ |+++..+++.+++   +.++.++++|++|+++++++++++.+++|++|
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   81 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID   81 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            5899999999999999999999999999875 4555566555443   67899999999999999999999999999999


Q ss_pred             EEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHHH
Q 024145           92 IMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGIL  171 (272)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~  171 (272)
                      +||||||....  .++.+.+.++|++++++|+.+++.++|+++|+|+++++|+||++||..+..+.++...|++||+|+.
T Consensus        82 iLVnnAg~~~~--~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal~  159 (244)
T d1edoa_          82 VVVNNAGITRD--TLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVI  159 (244)
T ss_dssp             EEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHH
T ss_pred             ccccccccccc--cchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCCCCHHHHHHHHHHH
Confidence            99999998776  7899999999999999999999999999999999989999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHh-cCCCCCccccE
Q 024145          172 GLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLA-SDESSYVSGQN  250 (272)
Q Consensus       172 ~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~-s~~~~~~~G~~  250 (272)
                      +|+|++|.|++++|||||+|+||+++||+...   ..++..+......|+ +|+.+|||+|++++||+ |++++++|||+
T Consensus       160 ~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~---~~~~~~~~~~~~~pl-~R~~~p~dvA~~v~fLa~S~~a~~itG~~  235 (244)
T d1edoa_         160 GFSKTAAREGASRNINVNVVCPGFIASDMTAK---LGEDMEKKILGTIPL-GRTGQPENVAGLVEFLALSPAASYITGQA  235 (244)
T ss_dssp             HHHHHHHHHHHTTTEEEEEEEECSBCSHHHHT---TCHHHHHHHHTSCTT-CSCBCHHHHHHHHHHHHHCSGGGGCCSCE
T ss_pred             HChHHHHHHHhhhCcEEEEEecceeccHHHHH---hhHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHHCCchhcCCcCCe
Confidence            99999999999999999999999999999874   334444555555666 89999999999999996 89999999999


Q ss_pred             EEecCceee
Q 024145          251 LVVDGGFSV  259 (272)
Q Consensus       251 i~~dgG~~~  259 (272)
                      |.+|||+++
T Consensus       236 i~vdGG~si  244 (244)
T d1edoa_         236 FTIDGGIAI  244 (244)
T ss_dssp             EEESTTTTC
T ss_pred             EEeCCCeeC
Confidence            999999864

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=1.4e-55  Score=369.74  Aligned_cols=244  Identities=32%  Similarity=0.474  Sum_probs=219.3

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   91 (272)
                      +|+||++|||||++|||++++++|+++|++|++++|+++.++++.++++.+..++++|++++++++++++++.+++|++|
T Consensus         3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iD   82 (253)
T d1hxha_           3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLN   82 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            58999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHHH
Q 024145           92 IMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGIL  171 (272)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~  171 (272)
                      +||||||...+  .++.+.+.++|++++++|+.+++.++|+++|+|++ ++|+||++||..+..+.+....|++||+|+.
T Consensus        83 ilVnnAG~~~~--~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~-~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~  159 (253)
T d1hxha_          83 VLVNNAGILLP--GDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKE-TGGSIINMASVSSWLPIEQYAGYSASKAAVS  159 (253)
T ss_dssp             EEEECCCCCCC--BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTT-TCEEEEEECCGGGTSCCTTBHHHHHHHHHHH
T ss_pred             eEEecccccCC--CCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHh-cCCceecccchhhhcCccccccccchhHHHH
Confidence            99999998766  78999999999999999999999999999999976 4699999999999999999999999999999


Q ss_pred             HHHHHHHHHhcCC--CcEEEEEeCCcccCCcccCCCCChhHHHHHHh---hcCCCCCCCCChHhHHHHHHHHhcCCCCCc
Q 024145          172 GLVKCLAAELGQY--GIRVNCVSPYGLATGMSMKGGVDPALIESSMS---QMGNLKGEFLKTDGIANAALYLASDESSYV  246 (272)
Q Consensus       172 ~~~~~la~e~~~~--gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  246 (272)
                      +|++++|.|++++  |||||+|+||+++|++.+....... ..+...   ...+ .+|+.+|||+|++++||+|++++|+
T Consensus       160 ~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~~-~~~~~~~~~~~~~-~gr~~~pedvA~~v~fL~S~~s~~i  237 (253)
T d1hxha_         160 ALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGV-SKEMVLHDPKLNR-AGRAYMPERIAQLVLFLASDESSVM  237 (253)
T ss_dssp             HHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTC-CHHHHBCBTTTBT-TCCEECHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcchh-hHHHHHhCccccc-cCCCCCHHHHHHHHHHHhChhhCCC
Confidence            9999999999874  5999999999999998753221111 112222   2222 3889999999999999999999999


Q ss_pred             cccEEEecCceeec
Q 024145          247 SGQNLVVDGGFSVV  260 (272)
Q Consensus       247 ~G~~i~~dgG~~~~  260 (272)
                      |||+|.+|||+..+
T Consensus       238 tG~~i~VDGG~~~~  251 (253)
T d1hxha_         238 SGSELHADNSILGM  251 (253)
T ss_dssp             CSCEEEESSSCTTT
T ss_pred             cCcEEEECccHhhC
Confidence            99999999998654

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=100.00  E-value=7.6e-55  Score=366.19  Aligned_cols=248  Identities=27%  Similarity=0.333  Sum_probs=219.9

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      ++|+||++|||||++|||++++++|+++|++|++++|+++.+++..+++   +..++++.+|+++.++++++++++.+++
T Consensus         2 f~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~   81 (258)
T d1ae1a_           2 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVF   81 (258)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHh
Confidence            6799999999999999999999999999999999999998888777665   5678899999999999999999999998


Q ss_pred             -CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhh
Q 024145           88 -GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTIS  166 (272)
Q Consensus        88 -g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~s  166 (272)
                       +.+|+||||||....  .++.+.+.++|++++++|+.+++.+++++.|+|.+++.|+||++||..+..+.+....|+++
T Consensus        82 ~g~idilinnag~~~~--~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~~~~~~Y~~s  159 (258)
T d1ae1a_          82 DGKLNILVNNAGVVIH--KEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSAS  159 (258)
T ss_dssp             TSCCCEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             CCCcEEEecccccccc--CccccCCHHHHhhhhhhccccccccccccccccccccccccccccccccccccccchhHHHH
Confidence             679999999998776  78999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCC---hhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCC
Q 024145          167 KYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVD---PALIESSMSQMGNLKGEFLKTDGIANAALYLASDES  243 (272)
Q Consensus       167 K~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  243 (272)
                      |+|+++|++.+|+|++++||+||+|+||+++||+.......   ..+..+.+....|+ +|+.+|||+|++++||+|+++
T Consensus       160 K~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl-gR~~~pediA~~v~fL~S~~s  238 (258)
T d1ae1a_         160 KGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPM-GRAGKPQEVSALIAFLCFPAA  238 (258)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTT-CSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhChhh
Confidence            99999999999999999999999999999999997654322   22333444444566 899999999999999999999


Q ss_pred             CCccccEEEecCceeecc
Q 024145          244 SYVSGQNLVVDGGFSVVN  261 (272)
Q Consensus       244 ~~~~G~~i~~dgG~~~~~  261 (272)
                      +++|||+|.||||+++..
T Consensus       239 ~~itG~~i~vDGG~s~~g  256 (258)
T d1ae1a_         239 SYITGQIIWADGGFTANG  256 (258)
T ss_dssp             TTCCSCEEEESTTGGGCS
T ss_pred             CCCcCcEEEeCCCeeccC
Confidence            999999999999998863

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=100.00  E-value=4.1e-55  Score=367.59  Aligned_cols=243  Identities=27%  Similarity=0.423  Sum_probs=216.1

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   91 (272)
                      .|++|||||++|||++++++|+++|++|++++|+++.++++.+++   +.++.++++|++|+++++++++++.+++|++|
T Consensus         1 KKValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   80 (255)
T d1gega_           1 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD   80 (255)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred             CCEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCcc
Confidence            378999999999999999999999999999999998888777665   56899999999999999999999999999999


Q ss_pred             EEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCC-CCceEEEEecccccccCCCCchhhhhHHHH
Q 024145           92 IMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQ-QKGCILFTASACTEIAGLGSPAYTISKYGI  170 (272)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~  170 (272)
                      +||||||+...  +++.+.+.++|++++++|+.+++.++|+++|+|.++ ..++||++||..+..+.++...|++||+|+
T Consensus        81 ilVnnAG~~~~--~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal  158 (255)
T d1gega_          81 VIVNNAGVAPS--TPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAV  158 (255)
T ss_dssp             EEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHH
T ss_pred             EEEeccccccc--CcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCcccccchhCHHHH
Confidence            99999998765  789999999999999999999999999999987665 468899999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCC--------CChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCC
Q 024145          171 LGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGG--------VDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDE  242 (272)
Q Consensus       171 ~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  242 (272)
                      ++|+|++|.|++++|||||+|+||+++||+.....        ...+.....+....|+ +|+.+|||+|++++||+|++
T Consensus       159 ~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl-~R~~~peevA~~v~fL~S~~  237 (255)
T d1gega_         159 RGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITL-GRLSEPEDVAACVSYLASPD  237 (255)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTT-CSCBCHHHHHHHHHHHHSGG
T ss_pred             HhhHHHHHHHhhhhCcEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCch
Confidence            99999999999999999999999999999865310        1111222233344555 89999999999999999999


Q ss_pred             CCCccccEEEecCceeec
Q 024145          243 SSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       243 ~~~~~G~~i~~dgG~~~~  260 (272)
                      ++|+|||+|.+|||+.++
T Consensus       238 a~~itG~~i~vDGG~~~n  255 (255)
T d1gega_         238 SDYMTGQSLLIDGGMVFN  255 (255)
T ss_dssp             GTTCCSCEEEESSSSSCC
T ss_pred             hCCccCcEEEecCCEEeC
Confidence            999999999999998653

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=1.3e-54  Score=368.04  Aligned_cols=248  Identities=29%  Similarity=0.420  Sum_probs=219.0

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---C---CceEEEEecCCCHHHHHHHHHHHHH
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---G---QDVCYIHCDISNEDEVINLVDTAVS   85 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~---~~~~~~~~D~~~~~~~~~~~~~~~~   85 (272)
                      +|+||++|||||++|||++++++|+++|++|++++|+++.++++.+++   +   .++.++.+|++++++++++++++.+
T Consensus         1 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (274)
T d1xhla_           1 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA   80 (274)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHH
Confidence            589999999999999999999999999999999999998888777765   1   3689999999999999999999999


Q ss_pred             HhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhh
Q 024145           86 KFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTI  165 (272)
Q Consensus        86 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~  165 (272)
                      ++|++|++|||||..........+.+.++|++++++|+.+++.++|+++|+|.+++.|+|+++||..+..+.++...|++
T Consensus        81 ~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~~~~~~Y~a  160 (274)
T d1xhla_          81 KFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYAC  160 (274)
T ss_dssp             HHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCTTSHHHHH
T ss_pred             HcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccCCCCceehh
Confidence            99999999999997655334566778999999999999999999999999999888999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChh---HHHHHHh---hcCCCCCCCCChHhHHHHHHHHh
Q 024145          166 SKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPA---LIESSMS---QMGNLKGEFLKTDGIANAALYLA  239 (272)
Q Consensus       166 sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~---~~~~~~~---~~~~~~~~~~~~~dva~~~~~l~  239 (272)
                      ||+|+++|+|++|.|++++|||||+|+||+++||+.........   ...+...   ...|+ +|+.+|||+|++++||+
T Consensus       161 sKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPl-gR~g~pediA~~v~fL~  239 (274)
T d1xhla_         161 AKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPV-GHCGKPEEIANIIVFLA  239 (274)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTT-SSCBCHHHHHHHHHHHH
T ss_pred             hhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCC-CCCcCHHHHHHHHHHHc
Confidence            99999999999999999999999999999999998765433222   1222222   22455 89999999999999999


Q ss_pred             cC-CCCCccccEEEecCceeec
Q 024145          240 SD-ESSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       240 s~-~~~~~~G~~i~~dgG~~~~  260 (272)
                      |+ .++|+|||+|.+|||+++.
T Consensus       240 S~d~s~~itG~~i~vDGG~~l~  261 (274)
T d1xhla_         240 DRNLSSYIIGQSIVADGGSTLV  261 (274)
T ss_dssp             CHHHHTTCCSCEEEESTTGGGC
T ss_pred             CCccccCccCcEEEeCcCHHHh
Confidence            95 6899999999999999875

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2e-54  Score=360.35  Aligned_cols=240  Identities=28%  Similarity=0.390  Sum_probs=214.9

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      ++|+||++|||||++|||++++++|+++|++|++++|+++.++++.++++ .+..+.+|++|++++++++    +++|++
T Consensus         1 mdl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~-~~~~~~~Dv~~~~~v~~~~----~~~g~i   75 (242)
T d1cyda_           1 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECP-GIEPVCVDLGDWDATEKAL----GGIGPV   75 (242)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST-TCEEEECCTTCHHHHHHHH----TTCCCC
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcC-CCeEEEEeCCCHHHHHHHH----HHcCCC
Confidence            46899999999999999999999999999999999999998888888775 5788999999999987655    467999


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcC-CCCceEEEEecccccccCCCCchhhhhHHH
Q 024145           91 DIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVP-QQKGCILFTASACTEIAGLGSPAYTISKYG  169 (272)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a  169 (272)
                      |+||||||+...  +++.+.+.++|++++++|+.+++.++|.+.|+|.+ +..|+||+++|..+..+.++...|++||+|
T Consensus        76 DilVnnAg~~~~--~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asKaa  153 (242)
T d1cyda_          76 DLLVNNAALVIM--QPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGA  153 (242)
T ss_dssp             SEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred             eEEEECCccccc--hhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCCccccccchHHH
Confidence            999999998765  78999999999999999999999999999998654 467999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCcccc
Q 024145          170 ILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQ  249 (272)
Q Consensus       170 ~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  249 (272)
                      +.+|+|++|.|++++|||||+|+||+++||+.+.....++. .+......|+ +|+.+|||+|++++||+|++++|+|||
T Consensus       154 l~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~-~~~~~~~~pl-~R~~~peeva~~v~fL~S~~s~~itG~  231 (242)
T d1cyda_         154 MTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEF-ARKLKERHPL-RKFAEVEDVVNSILFLLSDRSASTSGG  231 (242)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHH-HHHHHHHSTT-SSCBCHHHHHHHHHHHHSGGGTTCCSS
T ss_pred             HHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcCCHHH-HHHHHhcCCC-CCCcCHHHHHHHHHHHhCchhcCcCCc
Confidence            99999999999999999999999999999997754333333 3344445566 899999999999999999999999999


Q ss_pred             EEEecCceee
Q 024145          250 NLVVDGGFSV  259 (272)
Q Consensus       250 ~i~~dgG~~~  259 (272)
                      +|.+|||++.
T Consensus       232 ~i~vDGG~~a  241 (242)
T d1cyda_         232 GILVDAGYLA  241 (242)
T ss_dssp             EEEESTTGGG
T ss_pred             eEEeCcchhc
Confidence            9999999864

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=2.1e-54  Score=365.02  Aligned_cols=247  Identities=32%  Similarity=0.390  Sum_probs=203.8

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh------CCceEEEEecCCCHHHHHHHHHHHH
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL------GQDVCYIHCDISNEDEVINLVDTAV   84 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~   84 (272)
                      .+|+||++|||||++|||++++++|+++|++|++++|+++.++++.+++      +.++.++.+|++++++++++++++.
T Consensus         1 ~rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~   80 (264)
T d1spxa_           1 TRFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTL   80 (264)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHH
Confidence            3689999999999999999999999999999999999999888887765      1358999999999999999999999


Q ss_pred             HHhCCccEEEeCCCCCCC--CCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecc-cccccCCCCc
Q 024145           85 SKFGKLDIMYNNAGILDR--SFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASA-CTEIAGLGSP  161 (272)
Q Consensus        85 ~~~g~id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~-~~~~~~~~~~  161 (272)
                      +++|++|+||||||...+  ....+.+.+.++|++++++|+.+++.++|+++|+|.+++ |++|+++|. .+..+.+...
T Consensus        81 ~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~S~~~~~~~~~~~~  159 (264)
T d1spxa_          81 GKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHATPDFP  159 (264)
T ss_dssp             HHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCCTTSH
T ss_pred             HHhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCcccccc-CcceeeeeeccccccCCCch
Confidence            999999999999998643  123566778999999999999999999999999998754 556666555 5677899999


Q ss_pred             hhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCCh------hHHHHHHhhcCCCCCCCCChHhHHHHH
Q 024145          162 AYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDP------ALIESSMSQMGNLKGEFLKTDGIANAA  235 (272)
Q Consensus       162 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~dva~~~  235 (272)
                      .|++||+|+++|++++|.|++++|||||+|+||+++|+|........      ......+....|+ +|+.+|||+|+++
T Consensus       160 ~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl-~R~g~pedvA~~v  238 (264)
T d1spxa_         160 YYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPA-GVMGQPQDIAEVI  238 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTT-SSCBCHHHHHHHH
T ss_pred             hhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcCCC-CCCcCHHHHHHHH
Confidence            99999999999999999999999999999999999999876432211      1122233344555 8999999999999


Q ss_pred             HHHhcCC-CCCccccEEEecCceee
Q 024145          236 LYLASDE-SSYVSGQNLVVDGGFSV  259 (272)
Q Consensus       236 ~~l~s~~-~~~~~G~~i~~dgG~~~  259 (272)
                      +||+|++ ++|+|||+|.+|||+++
T Consensus       239 ~fL~S~~~s~~itG~~i~vDGG~sl  263 (264)
T d1spxa_         239 AFLADRKTSSYIIGHQLVVDGGSSL  263 (264)
T ss_dssp             HHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred             HHHhCCcccCCccCceEEeCCChhh
Confidence            9999964 89999999999999976

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=100.00  E-value=5.6e-54  Score=361.66  Aligned_cols=243  Identities=28%  Similarity=0.395  Sum_probs=215.5

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHH----hCCceEEEEecCCCHHHHHHHHHHHHHH
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADK----LGQDVCYIHCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (272)
                      ++|+||++|||||++|||++++++|+++|++|++++|+++..++..++    .+.++.++++|++++++++++++++.++
T Consensus         5 m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   84 (260)
T d1h5qa_           5 ISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDAD   84 (260)
T ss_dssp             ECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999998887665544    3678999999999999999999999999


Q ss_pred             hCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcC-CCCceEEEEecccccc-------cCC
Q 024145           87 FGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVP-QQKGCILFTASACTEI-------AGL  158 (272)
Q Consensus        87 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~g~iv~iss~~~~~-------~~~  158 (272)
                      +|++|+||||||...+  .++.+.+.++|++++++|+.+++.+++++.|+|.+ ...|+|++++|.....       +.+
T Consensus        85 ~g~iDilVnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~~~~~  162 (260)
T d1h5qa_          85 LGPISGLIANAGVSVV--KPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSL  162 (260)
T ss_dssp             SCSEEEEEECCCCCCC--SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEEC
T ss_pred             hCCCcEeccccccccc--CCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccccccCc
Confidence            9999999999998765  78999999999999999999999999999999864 4567777777765443       345


Q ss_pred             CCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHH
Q 024145          159 GSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYL  238 (272)
Q Consensus       159 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  238 (272)
                      +...|++||+|+.+|+|++|.|++++|||||+|+||+++|++...   .+++..+......|+ +|+.+|||+|++++||
T Consensus       163 ~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~---~~~~~~~~~~~~~pl-~R~g~pedvA~~v~fL  238 (260)
T d1h5qa_         163 TQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAH---MDKKIRDHQASNIPL-NRFAQPEEMTGQAILL  238 (260)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGG---SCHHHHHHHHHTCTT-SSCBCGGGGHHHHHHH
T ss_pred             cccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhc---cCHHHHHHHHhcCCC-CCCcCHHHHHHHHHHH
Confidence            778999999999999999999999999999999999999999874   334444555556666 8999999999999999


Q ss_pred             hcCCCCCccccEEEecCceee
Q 024145          239 ASDESSYVSGQNLVVDGGFSV  259 (272)
Q Consensus       239 ~s~~~~~~~G~~i~~dgG~~~  259 (272)
                      +|++++|+|||+|.||||+.+
T Consensus       239 ~S~~s~~itG~~i~VDGG~~~  259 (260)
T d1h5qa_         239 LSDHATYMTGGEYFIDGGQLI  259 (260)
T ss_dssp             HSGGGTTCCSCEEEECTTGGG
T ss_pred             hcchhCCCcCceEEECCCeec
Confidence            999999999999999999864

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.2e-54  Score=357.89  Aligned_cols=240  Identities=28%  Similarity=0.389  Sum_probs=215.5

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   91 (272)
                      .|+||++|||||++|||++++++|+++|++|++++|+++.++++.++++ .+..+.+|++|++++++++    +++|++|
T Consensus         4 ~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~-~~~~~~~Dv~d~~~v~~~~----~~~g~iD   78 (244)
T d1pr9a_           4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP-GIEPVCVDLGDWEATERAL----GSVGPVD   78 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST-TCEEEECCTTCHHHHHHHH----TTCCCCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcC-CCeEEEEeCCCHHHHHHHH----HHhCCce
Confidence            5899999999999999999999999999999999999999988888875 5788999999999987665    4679999


Q ss_pred             EEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhc-CCCCceEEEEecccccccCCCCchhhhhHHHH
Q 024145           92 IMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMV-PQQKGCILFTASACTEIAGLGSPAYTISKYGI  170 (272)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~  170 (272)
                      +||||||....  .++.+.+.++|++.+++|+.+++.++++++|+|. +++.|+||++||..+..+.+....|++||+|+
T Consensus        79 ilVnnAg~~~~--~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y~asKaal  156 (244)
T d1pr9a_          79 LLVNNAAVALL--QPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGAL  156 (244)
T ss_dssp             EEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHH
T ss_pred             EEEeccccccc--cchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccccchhhhhhhHHHH
Confidence            99999998766  7899999999999999999999999999999764 45689999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccccE
Q 024145          171 LGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQN  250 (272)
Q Consensus       171 ~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~  250 (272)
                      ++|+|++|.|++++|||||+|+||+++|++.+......+... ......|+ +|+.+|||+|++++||+|++++|+|||+
T Consensus       157 ~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~-~~~~~~pl-~R~~~peevA~~v~fL~S~~a~~itG~~  234 (244)
T d1pr9a_         157 DMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAK-TMLNRIPL-GKFAEVEHVVNAILFLLSDRSGMTTGST  234 (244)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCSHHHHH-HHHTTCTT-CSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccChHHHH-HHHhcCCC-CCCcCHHHHHHHHHHHhCchhCCcCCcE
Confidence            999999999999999999999999999999875444444333 33344555 8999999999999999999999999999


Q ss_pred             EEecCceeec
Q 024145          251 LVVDGGFSVV  260 (272)
Q Consensus       251 i~~dgG~~~~  260 (272)
                      |.+|||++.+
T Consensus       235 i~vDGG~~Ac  244 (244)
T d1pr9a_         235 LPVEGGFWAC  244 (244)
T ss_dssp             EEESTTGGGC
T ss_pred             EEECccHhhC
Confidence            9999999753

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=4.8e-54  Score=364.27  Aligned_cols=248  Identities=27%  Similarity=0.363  Sum_probs=211.7

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhC------CceEEEEecCCCHHHHHHHHHHHHH
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLG------QDVCYIHCDISNEDEVINLVDTAVS   85 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~   85 (272)
                      +|+||++|||||++|||++++++|+++|++|++++|+++.++++.+++.      .++.++.+|++++++++++++++.+
T Consensus         2 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~   81 (272)
T d1xkqa_           2 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK   81 (272)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            5899999999999999999999999999999999999998888877661      3689999999999999999999999


Q ss_pred             HhCCccEEEeCCCCCCCCC--CCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchh
Q 024145           86 KFGKLDIMYNNAGILDRSF--GSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAY  163 (272)
Q Consensus        86 ~~g~id~lv~~ag~~~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y  163 (272)
                      ++|++|+||||||...+..  ....+.+.++|++++++|+.+++.++|+++|+|++++.+.|+++||.++..+.++...|
T Consensus        82 ~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~~~~~~~~Y  161 (272)
T d1xkqa_          82 QFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYY  161 (272)
T ss_dssp             HHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSCCCSSHHH
T ss_pred             HhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhccccCCCCcchh
Confidence            9999999999999876511  22356778899999999999999999999999987554444444556778899999999


Q ss_pred             hhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHH---HH---HhhcCCCCCCCCChHhHHHHHHH
Q 024145          164 TISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIE---SS---MSQMGNLKGEFLKTDGIANAALY  237 (272)
Q Consensus       164 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~---~~---~~~~~~~~~~~~~~~dva~~~~~  237 (272)
                      ++||+|+.+|+|++|.|++++||+||+|+||+++|+|............   +.   .....|+ +|+.+|||+|++++|
T Consensus       162 ~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl-gR~g~pediA~~v~f  240 (272)
T d1xkqa_         162 AIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPI-GAAGKPEHIANIILF  240 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTT-SSCBCHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCCC-CCCcCHHHHHHHHHH
Confidence            9999999999999999999999999999999999999775433322111   11   1223444 899999999999999


Q ss_pred             HhcCC-CCCccccEEEecCceeec
Q 024145          238 LASDE-SSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       238 l~s~~-~~~~~G~~i~~dgG~~~~  260 (272)
                      |+|++ +.|+|||+|.+|||+++.
T Consensus       241 L~S~~as~~iTG~~i~vDGG~~l~  264 (272)
T d1xkqa_         241 LADRNLSFYILGQSIVADGGTSLV  264 (272)
T ss_dssp             HHCHHHHTTCCSCEEEESTTGGGC
T ss_pred             HhCcchhCCccCeEEEeCcCHHHh
Confidence            99976 579999999999999885

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=100.00  E-value=6.7e-54  Score=357.04  Aligned_cols=239  Identities=33%  Similarity=0.529  Sum_probs=211.1

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   91 (272)
                      +|+||++|||||++|||+++|++|+++|++|++++|+.+.+++..++++.++.++++|++++++++++++++.+++|++|
T Consensus         2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iD   81 (241)
T d2a4ka1           2 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLH   81 (241)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence            58999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHHH
Q 024145           92 IMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGIL  171 (272)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~  171 (272)
                      +||||||....  .++.+.+.++|++++++|+.+++.++|++.|+|.+.  +.++++|| .+..+.+++..|+++|+|++
T Consensus        82 iLinnAg~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~--~~i~~~ss-~a~~~~~~~~~Y~~sK~al~  156 (241)
T d2a4ka1          82 GVAHFAGVAHS--ALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEG--GSLVLTGS-VAGLGAFGLAHYAAGKLGVV  156 (241)
T ss_dssp             EEEEGGGGTTT--TC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTT--CEEEEECC-CTTCCHHHHHHHHHCSSHHH
T ss_pred             Eeccccccccc--cchhhhhccccccccccccccccccccccccccccc--cceeeccc-cccccccCccccchhhHHHH
Confidence            99999998765  789999999999999999999999999999998653  44555544 44455578889999999999


Q ss_pred             HHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccccEE
Q 024145          172 GLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNL  251 (272)
Q Consensus       172 ~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i  251 (272)
                      +|++++|+|++++||+||+|+||+++|++.+.   .+++..+......|+ +|+.+|||+|++++||+|+.++|+|||+|
T Consensus       157 ~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~---~~~~~~~~~~~~~p~-~r~~~p~dva~~v~fL~S~~s~~itG~~i  232 (241)
T d2a4ka1         157 GLARTLALELARKGVRVNVLLPGLIQTPMTAG---LPPWAWEQEVGASPL-GRAGRPEEVAQAALFLLSEESAYITGQAL  232 (241)
T ss_dssp             HHHHHHHHHHTTTTCEEEEEEECSBCCGGGTT---SCHHHHHHHHHTSTT-CSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHHHHHHhHhCCEEeeeccCcCCCHHHHh---hhHhHHHHHHhCCCC-CCCcCHHHHHHHHHHHhcchhCCCcCceE
Confidence            99999999999999999999999999999873   334444444445555 89999999999999999999999999999


Q ss_pred             EecCceee
Q 024145          252 VVDGGFSV  259 (272)
Q Consensus       252 ~~dgG~~~  259 (272)
                      .+|||+++
T Consensus       233 ~vDGG~s~  240 (241)
T d2a4ka1         233 YVDGGRSI  240 (241)
T ss_dssp             EESTTTTT
T ss_pred             EeCCCccc
Confidence            99999876

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-53  Score=365.37  Aligned_cols=246  Identities=28%  Similarity=0.360  Sum_probs=218.8

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh--------CCceEEEEecCCCHHHHHHHHHH
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL--------GQDVCYIHCDISNEDEVINLVDT   82 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~--------~~~~~~~~~D~~~~~~~~~~~~~   82 (272)
                      ..|+||++|||||++|||++++++|+++|++|++++|+.+.+++..+++        +.++.++++|++|++++++++++
T Consensus         8 g~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~   87 (297)
T d1yxma1           8 GLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS   87 (297)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHH
Confidence            4589999999999999999999999999999999999988877776654        35799999999999999999999


Q ss_pred             HHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCch
Q 024145           83 AVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPA  162 (272)
Q Consensus        83 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  162 (272)
                      +.+++|++|+||||||....  .++.+.+.++|++++++|+.+++.++|+++|+|.+++.|+||++|+ .+..+.+....
T Consensus        88 ~~~~~G~iDiLVnnAg~~~~--~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss-~~~~~~~~~~~  164 (297)
T d1yxma1          88 TLDTFGKINFLVNNGGGQFL--SPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIV-PTKAGFPLAVH  164 (297)
T ss_dssp             HHHHHSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECC-CCTTCCTTCHH
T ss_pred             HHHHhCCeEEEEeecccccc--CchhhhhhhhhhhhhcccccchhhHHHHHHHhhccccccccccccc-ccccccccccc
Confidence            99999999999999998765  7899999999999999999999999999999999988999998866 45567889999


Q ss_pred             hhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCC-hhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcC
Q 024145          163 YTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVD-PALIESSMSQMGNLKGEFLKTDGIANAALYLASD  241 (272)
Q Consensus       163 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  241 (272)
                      |++||+|+++|+|++|.|++++||+||+|+||+++|++....... .++..+......|+ +|+.+|||+|++++||+|+
T Consensus       165 Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~pl-gR~g~pedvA~~v~fL~Sd  243 (297)
T d1yxma1         165 SGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPA-KRIGVPEEVSSVVCFLLSP  243 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTT-SSCBCTHHHHHHHHHHHSG
T ss_pred             chhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCc
Confidence            999999999999999999999999999999999999997643221 22222333344455 8999999999999999999


Q ss_pred             CCCCccccEEEecCceeec
Q 024145          242 ESSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       242 ~~~~~~G~~i~~dgG~~~~  260 (272)
                      +++++|||+|.||||+++.
T Consensus       244 ~s~~iTG~~i~VDGG~sl~  262 (297)
T d1yxma1         244 AASFITGQSVDVDGGRSLY  262 (297)
T ss_dssp             GGTTCCSCEEEESTTGGGC
T ss_pred             hhcCcCCcEEEeCcChhhh
Confidence            9999999999999999874

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=100.00  E-value=2.5e-53  Score=360.46  Aligned_cols=247  Identities=28%  Similarity=0.447  Sum_probs=216.7

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      ++|+||++|||||++|||++++++|+++|++|++++|+++.++++.++.+.++..+.+|++++++++++++++.+++|++
T Consensus         1 M~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i   80 (276)
T d1bdba_           1 MKLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKI   80 (276)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCc
Confidence            35899999999999999999999999999999999999999998888888899999999999999999999999999999


Q ss_pred             cEEEeCCCCCCCCC---CCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhH
Q 024145           91 DIMYNNAGILDRSF---GSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISK  167 (272)
Q Consensus        91 d~lv~~ag~~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK  167 (272)
                      |++|||||+.....   ....+.+.++|++++++|+.+++.++|+++|+|+++ +|+||+++|..+..+.++...|++||
T Consensus        81 dilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~-~g~iI~i~S~~~~~~~~~~~~Y~asK  159 (276)
T d1bdba_          81 DTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVAS-RGNVIFTISNAGFYPNGGGPLYTAAK  159 (276)
T ss_dssp             CEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCGGGTSTTSSCHHHHHHH
T ss_pred             ccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhc-CCCceeeeechhccCCCCCchHHHHH
Confidence            99999999865421   123455567899999999999999999999999864 58999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCC-------ChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhc
Q 024145          168 YGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGV-------DPALIESSMSQMGNLKGEFLKTDGIANAALYLAS  240 (272)
Q Consensus       168 ~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  240 (272)
                      +|+++|+|++|.|++++ ||||+|+||+++|++......       ..++..+......|+ +|+.+|||+|++++||+|
T Consensus       160 aal~~ltr~lA~ela~~-IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl-gR~g~peeva~~v~fL~S  237 (276)
T d1bdba_         160 HAIVGLVRELAFELAPY-VRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPI-GRMPEVEEYTGAYVFFAT  237 (276)
T ss_dssp             HHHHHHHHHHHHHHTTT-CEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCTT-SSCCCGGGGSHHHHHHHC
T ss_pred             HHHHHHHHHHHHHhhcc-eEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHcC
Confidence            99999999999999975 999999999999998653211       122334444555666 999999999999999998


Q ss_pred             C-CCCCccccEEEecCceeec
Q 024145          241 D-ESSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       241 ~-~~~~~~G~~i~~dgG~~~~  260 (272)
                      + +++|+|||+|.||||+++.
T Consensus       238 ~~~a~~itG~~i~VDGG~~~~  258 (276)
T d1bdba_         238 RGDAAPATGALLNYDGGLGVR  258 (276)
T ss_dssp             HHHHTTCSSCEEEESSSGGGC
T ss_pred             CcccCCeeCcEEEECcChhhc
Confidence            5 6899999999999999875

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=2.1e-53  Score=356.52  Aligned_cols=239  Identities=23%  Similarity=0.259  Sum_probs=212.5

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEeC
Q 024145           17 VAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNN   96 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~   96 (272)
                      |+|||||++|||+++|++|+++|++|++++|+.+..+++.....   .+.++|+++.++++++++++.+++|++|+||||
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~---~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLVnN   78 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAE---TYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSN   78 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHH---HCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhC---cEEEeccCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            79999999999999999999999999999999888776654321   234689999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHHHHHHHH
Q 024145           97 AGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKC  176 (272)
Q Consensus        97 ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~~~~  176 (272)
                      ||+... .+++.+.+.++|++.+++|+.+++.++|+++|+|++++.|+||++||..+..+.+....|++||+|+++|+|+
T Consensus        79 Ag~~~~-~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~~~~~~Y~asKaal~~lt~~  157 (252)
T d1zmta1          79 DIFAPE-FQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANA  157 (252)
T ss_dssp             CCCCCC-CCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHHHHHHH
T ss_pred             CcCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccccccccccccccccccHHHHHHH
Confidence            997643 2678999999999999999999999999999999998899999999999999999999999999999999999


Q ss_pred             HHHHhcCCCcEEEEEeCCcccCCcccCCCC-----ChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccccEE
Q 024145          177 LAAELGQYGIRVNCVSPYGLATGMSMKGGV-----DPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNL  251 (272)
Q Consensus       177 la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i  251 (272)
                      +|.|++++|||||+|+||+++|++......     ..++..+......|+ +|+.+|||+|++++||+|++++|+|||+|
T Consensus       158 lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl-~R~g~pedvA~~v~fL~S~~s~~iTG~~i  236 (252)
T d1zmta1         158 LSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTAL-QRLGTQKELGELVAFLASGSCDYLTGQVF  236 (252)
T ss_dssp             HHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSS-SSCBCHHHHHHHHHHHHTTSCGGGTTCEE
T ss_pred             HHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCchhcCCcCCeE
Confidence            999999999999999999999998764321     122333444555666 89999999999999999999999999999


Q ss_pred             EecCceeec
Q 024145          252 VVDGGFSVV  260 (272)
Q Consensus       252 ~~dgG~~~~  260 (272)
                      .+|||+++.
T Consensus       237 ~vdGG~~~~  245 (252)
T d1zmta1         237 WLAGGFPMI  245 (252)
T ss_dssp             EESTTCCCC
T ss_pred             EECCCceeC
Confidence            999999875

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=2.7e-52  Score=350.75  Aligned_cols=246  Identities=22%  Similarity=0.277  Sum_probs=209.3

Q ss_pred             CCCCCcEEEEeCCCC--hHHHHHHHHHHHcCCeEEEeecCcchHHHHHHH--hCCceEEEEecCCCHHHHHHHHHHHHHH
Q 024145           11 KRLEGKVAIITGGAS--GIGAMAVELFHENGAKVVIADVQDKLGEDLADK--LGQDVCYIHCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus        11 ~~l~~k~vlItGas~--giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (272)
                      .+|+||++|||||+|  |||++++++|+++|++|++++|+++..++..+.  .+....++++|++|+++++++++++.++
T Consensus         4 ~~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (256)
T d1ulua_           4 VDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEA   83 (256)
T ss_dssp             ECCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHh
Confidence            478999999999987  999999999999999999999987655443322  2456788999999999999999999999


Q ss_pred             hCCccEEEeCCCCCCC--CCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhh
Q 024145           87 FGKLDIMYNNAGILDR--SFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYT  164 (272)
Q Consensus        87 ~g~id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~  164 (272)
                      +|++|+||||||....  ...++.+.+.++|+..+++|+.+++.+++++.|+|.+  .|+||++||..+..+.+....|+
T Consensus        84 ~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~--~G~Iv~isS~~~~~~~~~~~~Y~  161 (256)
T d1ulua_          84 FGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE--GGGIVTLTYYASEKVVPKYNVMA  161 (256)
T ss_dssp             HSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEEECGGGTSBCTTCHHHH
T ss_pred             cCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhcc--CCEEEEEeehHhcCCCCCchHHH
Confidence            9999999999998643  2245778899999999999999999999999999864  59999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCC
Q 024145          165 ISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESS  244 (272)
Q Consensus       165 ~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  244 (272)
                      +||+|+++|+|++|.|++++|||||+|+||+++|++....... ++..+......|+ +|+.+|||+|++++||+|++++
T Consensus       162 asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~-~~~~~~~~~~~pl-~R~~~pedvA~~v~fL~S~~s~  239 (256)
T d1ulua_         162 IAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGF-TKMYDRVAQTAPL-RRNITQEEVGNLGLFLLSPLAS  239 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------C-HHHHHHHHHHSTT-SSCCCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhh-HHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCchhC
Confidence            9999999999999999999999999999999999987743333 3334444455566 8999999999999999999999


Q ss_pred             CccccEEEecCceeec
Q 024145          245 YVSGQNLVVDGGFSVV  260 (272)
Q Consensus       245 ~~~G~~i~~dgG~~~~  260 (272)
                      |+|||+|.+|||+++.
T Consensus       240 ~itG~~i~VDGG~~~~  255 (256)
T d1ulua_         240 GITGEVVYVDAGYHIM  255 (256)
T ss_dssp             TCCSCEEEESTTGGGB
T ss_pred             CccCCeEEECcCEeCc
Confidence            9999999999999875

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=1.8e-51  Score=346.23  Aligned_cols=242  Identities=31%  Similarity=0.452  Sum_probs=211.1

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCc-chHHHHHHH---hCCceEEEEecCCCHHHHHHHHHHHHHH
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQD-KLGEDLADK---LGQDVCYIHCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~-~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (272)
                      .+|+||++|||||++|||+++++.|+++|++|++++++. +..++..++   .+.++.++.+|++|+++++++++++.++
T Consensus         2 ~~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~   81 (259)
T d1ja9a_           2 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSH   81 (259)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999876554 444554444   4678999999999999999999999999


Q ss_pred             hCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccc-cccCCCCchhhh
Q 024145           87 FGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACT-EIAGLGSPAYTI  165 (272)
Q Consensus        87 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~-~~~~~~~~~Y~~  165 (272)
                      +|++|++|||||....  .++.+.+.++|++.+++|+.+++.++|.++|+|++  .|++++++|..+ ..+.+.+..|++
T Consensus        82 ~g~idilinnag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~--~g~~iii~s~~~~~~~~~~~~~Y~a  157 (259)
T d1ja9a_          82 FGGLDFVMSNSGMEVW--CDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRR--GGRIILTSSIAAVMTGIPNHALYAG  157 (259)
T ss_dssp             HSCEEEEECCCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEE--EEEEEEECCGGGTCCSCCSCHHHHH
T ss_pred             cCCCcEEEeccccccc--cccccchHHHHHHHHhhccceeeeehhhhhhhhhc--CCcccccccccccccCCCCchhHHH
Confidence            9999999999998765  78999999999999999999999999999999965  467777777655 447889999999


Q ss_pred             hHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCC----------CCChhHHHHHHhhcCCCCCCCCChHhHHHHH
Q 024145          166 SKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKG----------GVDPALIESSMSQMGNLKGEFLKTDGIANAA  235 (272)
Q Consensus       166 sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  235 (272)
                      ||+|+++|+|++|+|++++||+||+|+||+++|++.+..          ....++..+......|+ +|+.+|+||++++
T Consensus       158 sK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl-~R~g~p~eVa~~v  236 (259)
T d1ja9a_         158 SKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPL-KRIGYPADIGRAV  236 (259)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTT-SSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCC-CCCcCHHHHHHHH
Confidence            999999999999999999999999999999999975421          12234455555666666 8999999999999


Q ss_pred             HHHhcCCCCCccccEEEecCce
Q 024145          236 LYLASDESSYVSGQNLVVDGGF  257 (272)
Q Consensus       236 ~~l~s~~~~~~~G~~i~~dgG~  257 (272)
                      +||+|++++++||++|.+|||.
T Consensus       237 ~fL~S~~a~~itG~~i~vDGG~  258 (259)
T d1ja9a_         237 SALCQEESEWINGQVIKLTGGG  258 (259)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHhCchhcCCcCceEEeCCCC
Confidence            9999999999999999999996

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=4.3e-52  Score=344.78  Aligned_cols=231  Identities=24%  Similarity=0.346  Sum_probs=204.7

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDI   92 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   92 (272)
                      |+||++|||||++|||++++++|+++|++|++++|+++.+    ++.+  ..++.+|+++.      ++.+.++++++|+
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l----~~~~--~~~~~~Dv~~~------~~~~~~~~g~iD~   69 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELL----KRSG--HRYVVCDLRKD------LDLLFEKVKEVDI   69 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHH----HHTC--SEEEECCTTTC------HHHHHHHSCCCSE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHH----HhcC--CcEEEcchHHH------HHHHHHHhCCCcE
Confidence            6899999999999999999999999999999999986543    3333  35678999863      4556778899999


Q ss_pred             EEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHHHH
Q 024145           93 MYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILG  172 (272)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~  172 (272)
                      ||||||....  .++.+.+.++|++.+++|+.+++.++|+++|+|++++.|+||+++|..+..+.+....|++||+|+++
T Consensus        70 lVnnAG~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~~~~~~Y~asKaal~~  147 (234)
T d1o5ia_          70 LVLNAGGPKA--GFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTG  147 (234)
T ss_dssp             EEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHH
T ss_pred             EEecccccCC--cchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccccccccccchhHHHHHHH
Confidence            9999998655  78899999999999999999999999999999999889999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccccEEE
Q 024145          173 LVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLV  252 (272)
Q Consensus       173 ~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~  252 (272)
                      |+|++|.|++++|||||+|+||+++|++....  ..++..+......|+ +|+.+|||+|++++||+|++++|+|||+|.
T Consensus       148 ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~--~~~~~~~~~~~~~pl-~R~~~pediA~~v~fL~S~~s~~itG~~i~  224 (234)
T d1o5ia_         148 FLKTLSFEVAPYGITVNCVAPGWTETERVKEL--LSEEKKKQVESQIPM-RRMAKPEEIASVVAFLCSEKASYLTGQTIV  224 (234)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBCCTTHHHH--SCHHHHHHHHTTSTT-SSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHHHHhcccCeEEeecccCccchhhhhhh--cCHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhChhhcCCcCcEEE
Confidence            99999999999999999999999999987642  233444445555666 899999999999999999999999999999


Q ss_pred             ecCceeec
Q 024145          253 VDGGFSVV  260 (272)
Q Consensus       253 ~dgG~~~~  260 (272)
                      +|||++.-
T Consensus       225 vDGG~s~~  232 (234)
T d1o5ia_         225 VDGGLSKF  232 (234)
T ss_dssp             ESTTCCCC
T ss_pred             ECcccccC
Confidence            99998753

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=1.2e-50  Score=343.44  Aligned_cols=247  Identities=26%  Similarity=0.436  Sum_probs=212.1

Q ss_pred             ccCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcc-hHHHHHHH---hCCceEEEEecCCCHHHHHHHHHHH
Q 024145            8 APFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDK-LGEDLADK---LGQDVCYIHCDISNEDEVINLVDTA   83 (272)
Q Consensus         8 ~~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~-~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~   83 (272)
                      +...+|+||++|||||++|||++++++|+++|++|++++|+.+ ..+++.++   .+.++.++.+|++|+++++++++++
T Consensus        11 ~~~~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~   90 (272)
T d1g0oa_          11 PQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEA   90 (272)
T ss_dssp             GGGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCcCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHH
Confidence            3557799999999999999999999999999999999987744 44555443   3678999999999999999999999


Q ss_pred             HHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccccc-ccCCCCch
Q 024145           84 VSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTE-IAGLGSPA  162 (272)
Q Consensus        84 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~-~~~~~~~~  162 (272)
                      .+++|++|++|||+|....  .++.+.+.++|++.+++|+.+++.++|++.|+|.+  .|++++++|..+. .+.+.+..
T Consensus        91 ~~~~g~idilV~nag~~~~--~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~--~g~~i~i~s~~~~~~~~~~~~~  166 (272)
T d1g0oa_          91 VKIFGKLDIVCSNSGVVSF--GHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEI--GGRLILMGSITGQAKAVPKHAV  166 (272)
T ss_dssp             HHHHSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCT--TCEEEEECCGGGTCSSCSSCHH
T ss_pred             HHHhCCCCccccccccchh--hhhhhhhhhHHHHHhhhccceeeeecccccccccc--ccccccccccccccccccchhh
Confidence            9999999999999998766  78999999999999999999999999999999975  4788888887654 45777788


Q ss_pred             hhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCC---------CCChhHHHHH-HhhcCCCCCCCCChHhHH
Q 024145          163 YTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKG---------GVDPALIESS-MSQMGNLKGEFLKTDGIA  232 (272)
Q Consensus       163 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~---------~~~~~~~~~~-~~~~~~~~~~~~~~~dva  232 (272)
                      |++||+|+++|+|++|.|++++|||||+|+||+++|++.+..         ....++..+. .....|+ +|+.+|||||
T Consensus       167 Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl-gR~~~peevA  245 (272)
T d1g0oa_         167 YSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPL-RRVGLPIDIA  245 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTT-CSCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCCC-CCCcCHHHHH
Confidence            999999999999999999999999999999999999975421         1112222222 2334555 8999999999


Q ss_pred             HHHHHHhcCCCCCccccEEEecCceee
Q 024145          233 NAALYLASDESSYVSGQNLVVDGGFSV  259 (272)
Q Consensus       233 ~~~~~l~s~~~~~~~G~~i~~dgG~~~  259 (272)
                      ++++||+|++++++||++|.+|||+++
T Consensus       246 ~~v~fL~s~~s~~itG~~i~vDGG~~m  272 (272)
T d1g0oa_         246 RVVCFLASNDGGWVTGKVIGIDGGACM  272 (272)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred             HHHHHHhCchhcCccCceEeECCCCCC
Confidence            999999999999999999999999753

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.3e-51  Score=343.48  Aligned_cols=235  Identities=27%  Similarity=0.409  Sum_probs=204.8

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh-----CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL-----GQDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      .+||++|||||++|||++++++|+++|++|++++|+.+.+++..+++     +.++.++.+|++++++++++++++.+++
T Consensus         1 i~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (254)
T d2gdza1           1 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   80 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            37999999999999999999999999999999999999888777766     3478999999999999999999999999


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCC---CceEEEEecccccccCCCCchhh
Q 024145           88 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ---KGCILFTASACTEIAGLGSPAYT  164 (272)
Q Consensus        88 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~g~iv~iss~~~~~~~~~~~~Y~  164 (272)
                      |++|+||||||....          ++|++++++|+.+++.+++.++|+|.+++   .|+||++||..+..+.+....|+
T Consensus        81 G~iDilVnnAg~~~~----------~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~  150 (254)
T d2gdza1          81 GRLDILVNNAGVNNE----------KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYC  150 (254)
T ss_dssp             SCCCEEEECCCCCCS----------SSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHH
T ss_pred             CCcCeeccccccccc----------ccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCCCccchH
Confidence            999999999997643          35889999999999999999999998753   48899999999999999999999


Q ss_pred             hhHHHHHHHHHH--HHHHhcCCCcEEEEEeCCcccCCcccCCCCCh-----hHHHHHHhhcCCCCCCCCChHhHHHHHHH
Q 024145          165 ISKYGILGLVKC--LAAELGQYGIRVNCVSPYGLATGMSMKGGVDP-----ALIESSMSQMGNLKGEFLKTDGIANAALY  237 (272)
Q Consensus       165 ~sK~a~~~~~~~--la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~dva~~~~~  237 (272)
                      +||+|+.+|+|+  ++.|++++|||||+|+||+++|||.+......     .+..+.+....|+ +|+.+|||+|++++|
T Consensus       151 asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~pedvA~~v~f  229 (254)
T d2gdza1         151 ASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKY-YGILDPPLIANGLIT  229 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHH-HCCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcCCC-CCCcCHHHHHHHHHH
Confidence            999999999997  68899999999999999999999976422111     1122223333444 789999999999999


Q ss_pred             HhcCCCCCccccEEEecCceeec
Q 024145          238 LASDESSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       238 l~s~~~~~~~G~~i~~dgG~~~~  260 (272)
                      |+|++  ++|||+|.||||..+.
T Consensus       230 L~s~~--~itG~~i~VdGG~~~~  250 (254)
T d2gdza1         230 LIEDD--ALNGAIMKITTSKGIH  250 (254)
T ss_dssp             HHHCT--TCSSCEEEEETTTEEE
T ss_pred             HHcCC--CCCCCEEEECCCCeee
Confidence            99874  4999999999998875

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=100.00  E-value=2.1e-50  Score=335.58  Aligned_cols=226  Identities=25%  Similarity=0.318  Sum_probs=206.1

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCe-------EEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHH
Q 024145           16 KVAIITGGASGIGAMAVELFHENGAK-------VVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVS   85 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~~-------V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (272)
                      +++|||||++|||++++++|+++|++       |++.+|+++.++++.+++   +.++.++.+|++|+++++++++++.+
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE   81 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            57999999999999999999999997       899999998888877665   56789999999999999999999999


Q ss_pred             HhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhh
Q 024145           86 KFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTI  165 (272)
Q Consensus        86 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~  165 (272)
                      ++|++|+||||||....  .++.+.+.++|++++++|+.+++.++|+++|+|++++.|+||++||..+..+.+++..|++
T Consensus        82 ~~g~iDilvnnAg~~~~--~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~a  159 (240)
T d2bd0a1          82 RYGHIDCLVNNAGVGRF--GALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCM  159 (240)
T ss_dssp             HTSCCSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             HcCCcceeecccccccC--CccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCCCCChHHHH
Confidence            99999999999998766  8899999999999999999999999999999999988999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCC
Q 024145          166 SKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSY  245 (272)
Q Consensus       166 sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  245 (272)
                      ||+|+.+|+++++.|++++||+||+|+||+++|||.....   ++          ...++++|||+|++++|+++++.++
T Consensus       160 sK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~~---~~----------~~~~~~~PedvA~~v~~l~s~~~~~  226 (240)
T d2bd0a1         160 SKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVD---DE----------MQALMMMPEDIAAPVVQAYLQPSRT  226 (240)
T ss_dssp             HHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCC---ST----------TGGGSBCHHHHHHHHHHHHTSCTTE
T ss_pred             HHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhcC---Hh----------hHhcCCCHHHHHHHHHHHHcCCccC
Confidence            9999999999999999999999999999999999987422   11          1146789999999999999988888


Q ss_pred             cccc-EEEecCc
Q 024145          246 VSGQ-NLVVDGG  256 (272)
Q Consensus       246 ~~G~-~i~~dgG  256 (272)
                      ++|+ ++..+||
T Consensus       227 ~~~~~~i~p~~G  238 (240)
T d2bd0a1         227 VVEEIILRPTSG  238 (240)
T ss_dssp             EEEEEEEEETTC
T ss_pred             ccCCEEEEecCC
Confidence            7777 4667776

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.5e-51  Score=341.35  Aligned_cols=241  Identities=30%  Similarity=0.490  Sum_probs=209.9

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGK   89 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (272)
                      |.+|+||++|||||++|||+++++.|+++|++|++++|+++.++++.+..  .+....+|+.+.+.++    ...+.+++
T Consensus         1 m~~l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~~--~~~~~~~d~~~~~~~~----~~~~~~~~   74 (245)
T d2ag5a1           1 MGRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYP--GIQTRVLDVTKKKQID----QFANEVER   74 (245)
T ss_dssp             CCTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGST--TEEEEECCTTCHHHHH----HHHHHCSC
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcc--CCceeeeecccccccc----cccccccc
Confidence            45699999999999999999999999999999999999988777665543  4778888998876654    45556789


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccccc-ccCCCCchhhhhHH
Q 024145           90 LDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTE-IAGLGSPAYTISKY  168 (272)
Q Consensus        90 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~-~~~~~~~~Y~~sK~  168 (272)
                      +|+||||+|....  +++.+.+.++|++.+++|+.+++.++|++.|+|.+++.|+||+++|..+. .+.+.+..|+++|+
T Consensus        75 id~lVn~ag~~~~--~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~~Y~~sKa  152 (245)
T d2ag5a1          75 LDVLFNVAGFVHH--GTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKA  152 (245)
T ss_dssp             CSEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHHHH
T ss_pred             ceeEEecccccCC--CChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhccCCccchhHHHHHHH
Confidence            9999999998776  78999999999999999999999999999999999899999999998775 57888899999999


Q ss_pred             HHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCC---CCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCC
Q 024145          169 GILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKG---GVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSY  245 (272)
Q Consensus       169 a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  245 (272)
                      |+++|+|++|.|++++|||||+|+||+++||+.+..   ....+...+......|+ +|+.+|||+++++.||+++++++
T Consensus       153 al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl-~R~~~pedva~~v~fL~s~~s~~  231 (245)
T d2ag5a1         153 AVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKT-GRFATAEEIAMLCVYLASDESAY  231 (245)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTT-SSCEEHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhChhhCC
Confidence            999999999999999999999999999999987632   12233333444445566 89999999999999999999999


Q ss_pred             ccccEEEecCceee
Q 024145          246 VSGQNLVVDGGFSV  259 (272)
Q Consensus       246 ~~G~~i~~dgG~~~  259 (272)
                      +|||+|.||||+++
T Consensus       232 iTG~~i~VDGG~sl  245 (245)
T d2ag5a1         232 VTGNPVIIDGGWSL  245 (245)
T ss_dssp             CCSCEEEECTTGGG
T ss_pred             CcCceEEeCCCcCC
Confidence            99999999999874

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=100.00  E-value=3.8e-50  Score=344.18  Aligned_cols=251  Identities=26%  Similarity=0.340  Sum_probs=217.7

Q ss_pred             cCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh----CCceEEEEecCCCHHHHHHHHHHHH
Q 024145            9 PFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL----GQDVCYIHCDISNEDEVINLVDTAV   84 (272)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~   84 (272)
                      +.++|+||++|||||++|||++++++|+++|++|++++|+.+..++..+++    +.++.++.+|+++.++++++++.+.
T Consensus        19 ~~~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~   98 (294)
T d1w6ua_          19 PPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELI   98 (294)
T ss_dssp             CTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhh
Confidence            346899999999999999999999999999999999999988777666544    6789999999999999999999999


Q ss_pred             HHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcC-CCCceEEEEecccccccCCCCchh
Q 024145           85 SKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVP-QQKGCILFTASACTEIAGLGSPAY  163 (272)
Q Consensus        85 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~g~iv~iss~~~~~~~~~~~~Y  163 (272)
                      ++++++|++|||||....  .++.+.+.+++++.+.+|+.+.+.+.+...+.+.. ...+.+++++|..+..+.++..+|
T Consensus        99 ~~~g~iDilvnnAg~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~~~~~Y  176 (294)
T d1w6ua_          99 KVAGHPNIVINNAAGNFI--SPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPS  176 (294)
T ss_dssp             HHTCSCSEEEECCCCCCC--SCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHH
T ss_pred             hhccccchhhhhhhhccc--cccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhcccccchH
Confidence            999999999999998766  77889999999999999999999998887766654 467778888998889999999999


Q ss_pred             hhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCC
Q 024145          164 TISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDES  243 (272)
Q Consensus       164 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  243 (272)
                      ++||+|+++|+|++|.|++++|||||+|+||+++|++........+...+......|+ +|+.+|||+|+++.||+|+++
T Consensus       177 sasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~pl-~R~~~pediA~~v~fL~sd~s  255 (294)
T d1w6ua_         177 ASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPC-GRLGTVEELANLAAFLCSDYA  255 (294)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTT-SSCBCHHHHHHHHHHHTSGGG
T ss_pred             HHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHHHHHHHhhcCCC-CCCCCHHHHHHHHHHHhCchh
Confidence            9999999999999999999999999999999999999875443344444445555566 899999999999999999999


Q ss_pred             CCccccEEEecCceeeccC
Q 024145          244 SYVSGQNLVVDGGFSVVNP  262 (272)
Q Consensus       244 ~~~~G~~i~~dgG~~~~~~  262 (272)
                      +|+|||+|.+|||.++..+
T Consensus       256 ~~itG~~i~vDGG~~l~~~  274 (294)
T d1w6ua_         256 SWINGAVIKFDGGEEVLIS  274 (294)
T ss_dssp             TTCCSCEEEESTTHHHHHH
T ss_pred             cCCCCcEEEECCChhheeC
Confidence            9999999999999887543

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.7e-50  Score=338.29  Aligned_cols=242  Identities=25%  Similarity=0.342  Sum_probs=208.3

Q ss_pred             ccCCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh-----CCceEEEEecCCCHHHHHHHHHH
Q 024145            8 APFKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL-----GQDVCYIHCDISNEDEVINLVDT   82 (272)
Q Consensus         8 ~~~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~   82 (272)
                      +.|.+|+||++|||||++|||+++|++|+++|++|++++|+++..+++.+++     +.++.+++||+++++++++++++
T Consensus         3 ~~M~~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~   82 (257)
T d1xg5a_           3 PGMERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSA   82 (257)
T ss_dssp             TTCGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHH
Confidence            3467799999999999999999999999999999999999998888887765     24789999999999999999999


Q ss_pred             HHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCC--CceEEEEeccccccc--CC
Q 024145           83 AVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ--KGCILFTASACTEIA--GL  158 (272)
Q Consensus        83 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~g~iv~iss~~~~~~--~~  158 (272)
                      +.+++|++|+||||||...+  .++.+.+.++|++.+++|+.+++.++++++|.|.+.+  .|+||++||..+...  .+
T Consensus        83 ~~~~~g~iD~lVnnAg~~~~--~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~~  160 (257)
T d1xg5a_          83 IRSQHSGVDICINNAGLARP--DTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLS  160 (257)
T ss_dssp             HHHHHCCCSEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCG
T ss_pred             HHHhcCCCCEEEecccccCC--CccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCCc
Confidence            99999999999999998766  7899999999999999999999999999999987643  699999999998754  44


Q ss_pred             CCchhhhhHHHHHHHHHHHHHHh--cCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHH
Q 024145          159 GSPAYTISKYGILGLVKCLAAEL--GQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAAL  236 (272)
Q Consensus       159 ~~~~Y~~sK~a~~~~~~~la~e~--~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  236 (272)
                      ....|++||+|+.+|+++++.|+  +++||+||+|+||+++|++.......  .... .....++ +++.+|||+|++++
T Consensus       161 ~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~--~~~~-~~~~~~~-~r~~~pedvA~~v~  236 (257)
T d1xg5a_         161 VTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDK--DPEK-AAATYEQ-MKCLKPEDVAEAVI  236 (257)
T ss_dssp             GGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTT--CHHH-HHHHHC----CBCHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcChh--hHHH-HHhcCCC-CCCcCHHHHHHHHH
Confidence            56679999999999999999998  78999999999999999987642211  1122 2223344 78999999999999


Q ss_pred             HHhcCCCCCccccE-EEecC
Q 024145          237 YLASDESSYVSGQN-LVVDG  255 (272)
Q Consensus       237 ~l~s~~~~~~~G~~-i~~dg  255 (272)
                      ||+|+++++++||+ ++.||
T Consensus       237 fL~s~~a~~itG~i~i~~~g  256 (257)
T d1xg5a_         237 YVLSTPAHIQIGDIQMRPTG  256 (257)
T ss_dssp             HHHHSCTTEEEEEEEEEETT
T ss_pred             HHhCChhcCeECCEEEEeCC
Confidence            99999999999997 55544

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.5e-50  Score=346.86  Aligned_cols=233  Identities=27%  Similarity=0.389  Sum_probs=208.5

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCc---------chHHHHHHHhCCceEEEEecCCCHHHHHHHHH
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQD---------KLGEDLADKLGQDVCYIHCDISNEDEVINLVD   81 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~---------~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   81 (272)
                      ++|+||++|||||++|||++++++|+++|++|++++|+.         +.+++..++++.......+|+++.++++++++
T Consensus         3 m~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~   82 (302)
T d1gz6a_           3 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVK   82 (302)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHH
T ss_pred             cCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHH
Confidence            468999999999999999999999999999999987643         34556666666666778899999999999999


Q ss_pred             HHHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCc
Q 024145           82 TAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSP  161 (272)
Q Consensus        82 ~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  161 (272)
                      ++.+++|++|+||||||+..+  +++.+.+.++|++++++|+.+++.++|+++|+|++++.|+||++||..+..+.++..
T Consensus        83 ~~~~~~G~iDiLVnNAGi~~~--~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~~~~~  160 (302)
T d1gz6a_          83 TALDTFGRIDVVVNNAGILRD--RSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQA  160 (302)
T ss_dssp             HHHHHTSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCH
T ss_pred             HHHHHcCCCCEEEECCccCCC--CChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCCCCcH
Confidence            999999999999999999876  889999999999999999999999999999999998899999999999999999999


Q ss_pred             hhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcC
Q 024145          162 AYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASD  241 (272)
Q Consensus       162 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  241 (272)
                      .|++||+|+.+|+++++.|++++||+||+|+||++.|++...   .++..           .+..+|||+|++++||+|+
T Consensus       161 ~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~---~~~~~-----------~~~~~PedvA~~v~fL~S~  226 (302)
T d1gz6a_         161 NYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETV---MPEDL-----------VEALKPEYVAPLVLWLCHE  226 (302)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGG---SCHHH-----------HHHSCGGGTHHHHHHHTST
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhc---CcHhh-----------HhcCCHHHHHHHHHHHcCC
Confidence            999999999999999999999999999999999998877652   22211           3446899999999999997


Q ss_pred             CCCCccccEEEecCceeec
Q 024145          242 ESSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       242 ~~~~~~G~~i~~dgG~~~~  260 (272)
                      .+ ++|||+|.+|||+...
T Consensus       227 ~a-~itG~~i~vdGG~~~~  244 (302)
T d1gz6a_         227 SC-EENGGLFEVGAGWIGK  244 (302)
T ss_dssp             TC-CCCSCEEEEETTEEEE
T ss_pred             Cc-CCCCcEEEeCCCceeE
Confidence            64 7999999999998653

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.7e-47  Score=318.64  Aligned_cols=238  Identities=29%  Similarity=0.423  Sum_probs=207.9

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      ++|+||++|||||++|||++++++|+++|++|++++|+++.+++..++++.......+|+.+.++++.....+...++.+
T Consensus         1 ~slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (248)
T d2o23a1           1 RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRV   80 (248)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCcccccccccccccccccccccccccccc
Confidence            46899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cEEEeCCCCCCCC----CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCC------CCceEEEEecccccccCCCC
Q 024145           91 DIMYNNAGILDRS----FGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQ------QKGCILFTASACTEIAGLGS  160 (272)
Q Consensus        91 d~lv~~ag~~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~------~~g~iv~iss~~~~~~~~~~  160 (272)
                      |.+++|++.....    ..+..+.+.++|++++++|+.+++++++++.|+|..+      ++|+||++||..+..+.+++
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~  160 (248)
T d2o23a1          81 DVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQ  160 (248)
T ss_dssp             CEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTC
T ss_pred             cccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCCCCc
Confidence            9999998765431    1456678899999999999999999999999997643      57899999999999999999


Q ss_pred             chhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhc
Q 024145          161 PAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLAS  240 (272)
Q Consensus       161 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  240 (272)
                      ..|++||+|+++|+|+++.|++++||+||+|+||+++|++...   .+++..+......|+.+|+.+|||+|++++||++
T Consensus       161 ~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~---~~~~~~~~~~~~~pl~~R~g~peevA~~v~fL~s  237 (248)
T d2o23a1         161 AAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTS---LPEKVCNFLASQVPFPSRLGDPAEYAHLVQAIIE  237 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-------------CHHHHTCSSSCSCBCHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhc---CCHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999999999873   2333334444455555899999999999999997


Q ss_pred             CCCCCccccEEEe
Q 024145          241 DESSYVSGQNLVV  253 (272)
Q Consensus       241 ~~~~~~~G~~i~~  253 (272)
                        ++|+|||+|+|
T Consensus       238 --~~~itGq~I~v  248 (248)
T d2o23a1         238 --NPFLNGEVIRL  248 (248)
T ss_dssp             --CTTCCSCEEEE
T ss_pred             --CCCCCceEeEC
Confidence              58999999986

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=5.5e-47  Score=318.72  Aligned_cols=238  Identities=18%  Similarity=0.198  Sum_probs=205.5

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHH---cCCeEEEeecCcchHHHHHHHh-----CCceEEEEecCCCHHHHHHHHHHH
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHE---NGAKVVIADVQDKLGEDLADKL-----GQDVCYIHCDISNEDEVINLVDTA   83 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~---~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~   83 (272)
                      .|+||++|||||++|||++++++|++   +|++|++++|+++.++++.+++     +.++.++.||++++++++++++.+
T Consensus         3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~   82 (259)
T d1oaaa_           3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV   82 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence            58999999999999999999999997   7999999999999888887765     347899999999999999999998


Q ss_pred             HHH----hCCccEEEeCCCCCCC-CCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCC--CceEEEEeccccccc
Q 024145           84 VSK----FGKLDIMYNNAGILDR-SFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQ--KGCILFTASACTEIA  156 (272)
Q Consensus        84 ~~~----~g~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~g~iv~iss~~~~~~  156 (272)
                      .+.    ++.+|++|||||...+ ..+++.+.+.++|++++++|+.+++.++|+++|+|.+++  .|+||++||..+..+
T Consensus        83 ~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~~  162 (259)
T d1oaaa_          83 RELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQP  162 (259)
T ss_dssp             HHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSC
T ss_pred             HHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccCC
Confidence            763    4578999999997653 236688999999999999999999999999999998865  589999999999999


Q ss_pred             CCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCC--CChhHHHHHHhhcCCCCCCCCChHhHHHH
Q 024145          157 GLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGG--VDPALIESSMSQMGNLKGEFLKTDGIANA  234 (272)
Q Consensus       157 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~dva~~  234 (272)
                      .+++..|++||+|+++|+++++.|  .+||+||+|+||+++|+|.+...  ...++..+.+....+. +++.+|+|+|+.
T Consensus       163 ~~~~~~Y~asKaal~~lt~~la~e--~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~-~r~~~p~evA~~  239 (259)
T d1oaaa_         163 YKGWGLYCAGKAARDMLYQVLAAE--EPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSD-GALVDCGTSAQK  239 (259)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHH--CTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHT-TCSBCHHHHHHH
T ss_pred             CccchHHHHHHHHHHHHHHHHHhC--CCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhcCCC-CCCCCHHHHHHH
Confidence            999999999999999999999999  67999999999999999865321  1122333334444444 889999999999


Q ss_pred             HHHHhcCCCCCccccEEEe
Q 024145          235 ALYLASDESSYVSGQNLVV  253 (272)
Q Consensus       235 ~~~l~s~~~~~~~G~~i~~  253 (272)
                      +++|+++ ++++|||+|.+
T Consensus       240 i~~ll~~-~s~~TG~~idv  257 (259)
T d1oaaa_         240 LLGLLQK-DTFQSGAHVDF  257 (259)
T ss_dssp             HHHHHHH-CCSCTTEEEET
T ss_pred             HHHHhhh-ccCCCCCeEEe
Confidence            9999986 57999999976

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=100.00  E-value=1.6e-46  Score=314.49  Aligned_cols=234  Identities=18%  Similarity=0.159  Sum_probs=196.4

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh----CCceEEEEecCC-CHHHHHHHHHHHHH
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL----GQDVCYIHCDIS-NEDEVINLVDTAVS   85 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~-~~~~~~~~~~~~~~   85 (272)
                      ++|+||++|||||++|||+++|++|+++|++|++++|+.+..+++.+..    +.++.++.+|++ +.++++++++++.+
T Consensus         1 m~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   80 (254)
T d1sbya1           1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFD   80 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999988777655443321    347999999998 67889999999999


Q ss_pred             HhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCC---CCceEEEEecccccccCCCCch
Q 024145           86 KFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQ---QKGCILFTASACTEIAGLGSPA  162 (272)
Q Consensus        86 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~~g~iv~iss~~~~~~~~~~~~  162 (272)
                      ++|++|+||||||...          .+.|++++++|+.+++.++++++|+|.++   ..|+||++||..+..+.+++..
T Consensus        81 ~~g~iDilvnnAG~~~----------~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~~~~~  150 (254)
T d1sbya1          81 QLKTVDILINGAGILD----------DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPV  150 (254)
T ss_dssp             HHSCCCEEEECCCCCC----------TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHH
T ss_pred             HcCCCCEEEeCCCCCC----------HHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCCCCHH
Confidence            9999999999999642          46789999999999999999999999775   3689999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCC
Q 024145          163 YTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDE  242 (272)
Q Consensus       163 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  242 (272)
                      |++||+|+.+|+++++.|++++||+||+|+||+++||+.+... ......+...... ...+..+||++|+.++++++..
T Consensus       151 Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~e~va~~~~~~~~~~  228 (254)
T d1sbya1         151 YSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFN-SWLDVEPRVAELL-LSHPTQTSEQCGQNFVKAIEAN  228 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCC-CGGGSCTTHHHHH-TTSCCEEHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccc-cchhHHHHHHhcc-ccCCCCCHHHHHHHHHHhhhCC
Confidence            9999999999999999999999999999999999999876432 2222222222211 2256678999999988877543


Q ss_pred             CCCccccEEEecCceee
Q 024145          243 SSYVSGQNLVVDGGFSV  259 (272)
Q Consensus       243 ~~~~~G~~i~~dgG~~~  259 (272)
                         .||++|.+|||...
T Consensus       229 ---~tG~vi~vdgG~l~  242 (254)
T d1sbya1         229 ---KNGAIWKLDLGTLE  242 (254)
T ss_dssp             ---CTTCEEEEETTEEE
T ss_pred             ---CCCCEEEECCCEeC
Confidence               49999999999744

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.9e-45  Score=309.07  Aligned_cols=247  Identities=20%  Similarity=0.237  Sum_probs=211.3

Q ss_pred             CCCCcEEEEeCCCC--hHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh--CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           12 RLEGKVAIITGGAS--GIGAMAVELFHENGAKVVIADVQDKLGEDLADKL--GQDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        12 ~l~~k~vlItGas~--giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      .|+||++|||||++  |||+++|++|+++|++|++++|+++..+...+..  ......+..|+++..++...++++.+.+
T Consensus         2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (258)
T d1qsga_           2 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVW   81 (258)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTC
T ss_pred             cCCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhcc
Confidence            47999999999998  8999999999999999999999876554443322  4567889999999999999999999999


Q ss_pred             CCccEEEeCCCCCCCCC---CCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhh
Q 024145           88 GKLDIMYNNAGILDRSF---GSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYT  164 (272)
Q Consensus        88 g~id~lv~~ag~~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~  164 (272)
                      +++|++|||++......   ........+.|...+++|+.+.+.+++.+.+.+.  +.+.||++||..+..+.+....|+
T Consensus        82 ~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~Ii~iss~~~~~~~~~~~~Y~  159 (258)
T d1qsga_          82 PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLN--PGSALLTLSYLGAERAIPNYNVMG  159 (258)
T ss_dssp             SSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEE--EEEEEEEEECGGGTSBCTTTTHHH
T ss_pred             cccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcc--CCcEEEEecchhhccCCCCcHHHH
Confidence            99999999998765411   1233566788999999999999999999999885  457799999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCC
Q 024145          165 ISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESS  244 (272)
Q Consensus       165 ~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  244 (272)
                      +||+|+++|+|++|.|++++|||||+|+||+++|++..... ..+...+......|+ +|+.+|||+|++++||+|++++
T Consensus       160 ~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~-~~~~~~~~~~~~~pl-~R~~~peeia~~v~fL~s~~s~  237 (258)
T d1qsga_         160 LAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIK-DFRKMLAHCEAVTPI-RRTVTIEDVGNSAAFLCSDLSA  237 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGST-THHHHHHHHHHHSTT-SSCCCHHHHHHHHHHHTSGGGT
T ss_pred             HHHHHHHHHHHHHHHHhCccCceeecccccccccccccccc-hhhhHHHHHHhCCCC-CCCcCHHHHHHHHHHHhCchhc
Confidence            99999999999999999999999999999999999987532 233333334445566 8999999999999999999999


Q ss_pred             CccccEEEecCceeeccC
Q 024145          245 YVSGQNLVVDGGFSVVNP  262 (272)
Q Consensus       245 ~~~G~~i~~dgG~~~~~~  262 (272)
                      ++||++|.+|||+++..+
T Consensus       238 ~itG~~i~vDGG~~i~g~  255 (258)
T d1qsga_         238 GISGEVVHVDGGFSIAAM  255 (258)
T ss_dssp             TCCSCEEEESTTGGGBCS
T ss_pred             CccCceEEECcCHHHhcC
Confidence            999999999999988743

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.5e-46  Score=308.69  Aligned_cols=215  Identities=26%  Similarity=0.396  Sum_probs=194.9

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      .+++||++|||||++|||++++++|+++|++|++++|++++++++.+++   +.++..+.||++|+++++++++++.+++
T Consensus         3 ~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~   82 (244)
T d1yb1a_           3 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEI   82 (244)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHc
Confidence            4689999999999999999999999999999999999999888777665   5689999999999999999999999999


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhH
Q 024145           88 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISK  167 (272)
Q Consensus        88 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK  167 (272)
                      |++|++|||||....  ..+.+.+.++|++++++|+.+++.++++++|+|.++++|+||++||..+..+.++++.|++||
T Consensus        83 g~idilinnag~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asK  160 (244)
T d1yb1a_          83 GDVSILVNNAGVVYT--SDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSK  160 (244)
T ss_dssp             CCCSEEEECCCCCCC--CCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHHHHH
T ss_pred             CCCceeEeecccccc--ccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCCCCcHHHHHHH
Confidence            999999999998876  778889999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhcC---CCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcC
Q 024145          168 YGILGLVKCLAAELGQ---YGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASD  241 (272)
Q Consensus       168 ~a~~~~~~~la~e~~~---~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  241 (272)
                      +|+.+|+++|+.|+++   +||+||+|+||+++|++.+.   ...       .    .++.++||++++.++.....
T Consensus       161 aal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~---~~~-------~----~~~~~~pe~va~~i~~~~~~  223 (244)
T d1yb1a_         161 FAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN---PST-------S----LGPTLEPEEVVNRLMHGILT  223 (244)
T ss_dssp             HHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC---THH-------H----HCCCCCHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhC---cCc-------c----ccCCCCHHHHHHHHHHHHhc
Confidence            9999999999999865   58999999999999999863   111       1    14667999999998876644

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=100.00  E-value=5.2e-45  Score=310.31  Aligned_cols=237  Identities=23%  Similarity=0.303  Sum_probs=193.6

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcc-hHHHHHHHh----CCceEEE-----------------EecCCCHH
Q 024145           17 VAIITGGASGIGAMAVELFHENGAKVVIADVQDK-LGEDLADKL----GQDVCYI-----------------HCDISNED   74 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~~V~~~~r~~~-~~~~~~~~~----~~~~~~~-----------------~~D~~~~~   74 (272)
                      ++|||||++|||++++++|+++|++|++++++.+ ..+++.+++    +.....+                 .+|+++.+
T Consensus         4 VAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~~   83 (284)
T d1e7wa_           4 VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLFT   83 (284)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCHH
Confidence            7999999999999999999999999999877544 444444443    3344444                 45699999


Q ss_pred             HHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHH--------------HHHHHHHhHHHHHHHHHHHHhh---
Q 024145           75 EVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDL--------------ERLINVNTIGGFLGAKHAARVM---  137 (272)
Q Consensus        75 ~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~--------------~~~~~~n~~~~~~l~~~~~~~~---  137 (272)
                      +++++++++.+++|++|+||||||...+  .++.+.+.++|              ..++.+|+.+++.+.+.+.+.+   
T Consensus        84 ~v~~~~~~~~~~~G~iDiLVnnAG~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~  161 (284)
T d1e7wa_          84 RCAELVAACYTHWGRCDVLVNNASSFYP--TPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGT  161 (284)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCC--CCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHhCCCCEEEecCCccCC--CchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhh
Confidence            9999999999999999999999998766  56666655544              3578999999999999988764   


Q ss_pred             ---cCCCCceEEEEecccccccCCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHH
Q 024145          138 ---VPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESS  214 (272)
Q Consensus       138 ---~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~  214 (272)
                         .+...++||+++|.....+.+++..|++||+|+++|++++|.|++++||+||+|+||++.+...     .++...+.
T Consensus       162 ~~~~~~~~~~ii~~~s~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~~-----~~~~~~~~  236 (284)
T d1e7wa_         162 PAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDD-----MPPAVWEG  236 (284)
T ss_dssp             CGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGGG-----SCHHHHHH
T ss_pred             HHHhcCCCCcccccccccccCCccceeeeccccccchhhhHHHHHHhCCcccccccccccccccccc-----CCHHHHHH
Confidence               3445788999999999999999999999999999999999999999999999999998655432     22333444


Q ss_pred             HhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccccEEEecCceeec
Q 024145          215 MSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       215 ~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~  260 (272)
                      .....++.+|+.+|||+|++++||+|++++|+|||+|.+|||++++
T Consensus       237 ~~~~~pl~~R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG~sl~  282 (284)
T d1e7wa_         237 HRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT  282 (284)
T ss_dssp             HHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHhcCCCCCCCCCHHHHHHHHHHHhCchhcCccCCeEEECcChhcc
Confidence            4444555589999999999999999999999999999999999875

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=2.8e-45  Score=318.31  Aligned_cols=245  Identities=16%  Similarity=0.205  Sum_probs=201.6

Q ss_pred             CCcEEEEeC--CCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhC---------------CceEEE----------
Q 024145           14 EGKVAIITG--GASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLG---------------QDVCYI----------   66 (272)
Q Consensus        14 ~~k~vlItG--as~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~---------------~~~~~~----------   66 (272)
                      ++|++||||  +++|||++++++|+++|++|+++++.............               ......          
T Consensus         1 n~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (329)
T d1uh5a_           1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhc
Confidence            479999999  66899999999999999999999887654433322110               112222          


Q ss_pred             ----------EecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHh
Q 024145           67 ----------HCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARV  136 (272)
Q Consensus        67 ----------~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  136 (272)
                                .+|+++.++++++++++.+++|++|+||||+|...+..+++.+.+.++|.+.+++|+.+++.++|+++|+
T Consensus        81 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~  160 (329)
T d1uh5a_          81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI  160 (329)
T ss_dssp             GCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             ccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhh
Confidence                      2367788889999999999999999999999977653367889999999999999999999999999999


Q ss_pred             hcCCCCceEEEEecccccccCCC-CchhhhhHHHHHHHHHHHHHHhcC-CCcEEEEEeCCcccCCcccCC----------
Q 024145          137 MVPQQKGCILFTASACTEIAGLG-SPAYTISKYGILGLVKCLAAELGQ-YGIRVNCVSPYGLATGMSMKG----------  204 (272)
Q Consensus       137 ~~~~~~g~iv~iss~~~~~~~~~-~~~Y~~sK~a~~~~~~~la~e~~~-~gi~v~~i~Pg~v~t~~~~~~----------  204 (272)
                      |.+  .|+||++||..+..+.|. ...|++||+|+++|+|++|.|+++ +|||||+|+||+++|++.+..          
T Consensus       161 m~~--~GsIv~iss~~~~~~~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T~a~~~i~g~~~~~~~~  238 (329)
T d1uh5a_         161 MKP--QSSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENN  238 (329)
T ss_dssp             EEE--EEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCTTGGGCC---------
T ss_pred             ccc--ccccccceeehhcccccccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccchhhhcccchhhhhhhh
Confidence            954  599999999999888876 467999999999999999999986 699999999999999532210          


Q ss_pred             --------------------------------CCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccccEEE
Q 024145          205 --------------------------------GVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLV  252 (272)
Q Consensus       205 --------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~  252 (272)
                                                      ....+...+......|+ +|+.+|||+|++++||+|+.++|+|||+|.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl-~R~~~pedvA~~v~fLaSd~s~~iTGq~i~  317 (329)
T d1uh5a_         239 TNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPL-RQKLLSTDIGSVASFLLSRESRAITGQTIY  317 (329)
T ss_dssp             ---------------------------------CHHHHHHHHHHHHSSS-CSCCCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             hhhhhccccccccccccccccccchhhhhhhcccchHHHHHHHhccCCC-CCCcCHHHHHHHHHHHhCchhCCccCCeEE
Confidence                                            11122344444555666 899999999999999999999999999999


Q ss_pred             ecCceeecc
Q 024145          253 VDGGFSVVN  261 (272)
Q Consensus       253 ~dgG~~~~~  261 (272)
                      ||||+++..
T Consensus       318 VDGG~~~~g  326 (329)
T d1uh5a_         318 VDNGLNIMF  326 (329)
T ss_dssp             ESTTGGGCS
T ss_pred             ECCCccccc
Confidence            999998754

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=2e-44  Score=308.66  Aligned_cols=250  Identities=20%  Similarity=0.186  Sum_probs=201.3

Q ss_pred             CCCCCcEEEEeCCCC--hHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh------------CC--c-eEEEEec----
Q 024145           11 KRLEGKVAIITGGAS--GIGAMAVELFHENGAKVVIADVQDKLGEDLADKL------------GQ--D-VCYIHCD----   69 (272)
Q Consensus        11 ~~l~~k~vlItGas~--giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~------------~~--~-~~~~~~D----   69 (272)
                      .+|+||++|||||++  |||++++++|+++|++|++++|++..........            ..  . -....+|    
T Consensus         4 ~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (297)
T d1d7oa_           4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFD   83 (297)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCC
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhcc
Confidence            568999999999875  9999999999999999999998765332222111            00  0 1233333    


Q ss_pred             ----------------CCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHH
Q 024145           70 ----------------ISNEDEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHA  133 (272)
Q Consensus        70 ----------------~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~  133 (272)
                                      .++.++++++++++.+++|++|+||||||.......++.+.+.++|++.+++|+.+++.+++++
T Consensus        84 ~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~  163 (297)
T d1d7oa_          84 NPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHF  163 (297)
T ss_dssp             SGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             ccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHH
Confidence                            3455677889999999999999999999986544467899999999999999999999999999


Q ss_pred             HHhhcCCCCceEEEEecccccc-cCCCCchhhhhHHHHHHHHHHHHHHhc-CCCcEEEEEeCCcccCCcccCCCCChhHH
Q 024145          134 ARVMVPQQKGCILFTASACTEI-AGLGSPAYTISKYGILGLVKCLAAELG-QYGIRVNCVSPYGLATGMSMKGGVDPALI  211 (272)
Q Consensus       134 ~~~~~~~~~g~iv~iss~~~~~-~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~  211 (272)
                      ++++.++  |+++.+++..... ..+....|+++|+++.++++.++.|++ ++|||||+|+||+++|++.+.. ...++.
T Consensus       164 ~~~~~~~--g~~~~~~~~~~~~~~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~-~~~~~~  240 (297)
T d1d7oa_         164 LPIMNPG--GASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAI-GFIDTM  240 (297)
T ss_dssp             GGGEEEE--EEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCC-SHHHHH
T ss_pred             HHHhhcC--CcceeeeehhhcccccccccceecccccccccccccchhccccceEEecccccccccchhhhhc-cCCHHH
Confidence            9988654  5666666665443 456777899999999999999999996 5799999999999999998742 223344


Q ss_pred             HHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccccEEEecCceeeccCcc
Q 024145          212 ESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVVNPTV  264 (272)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~~  264 (272)
                      .+......|+ +|+.+|||+|++++||+|++++|+|||+|.+|||+++++..+
T Consensus       241 ~~~~~~~~Pl-gR~~~peevA~~v~fL~S~~a~~itGq~i~vDGG~s~~G~~~  292 (297)
T d1d7oa_         241 IEYSYNNAPI-QKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNSMGVAL  292 (297)
T ss_dssp             HHHHHHHSSS-CCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGCSSCT
T ss_pred             HHHHHhCCCC-CCCCCHHHHHHHHHHHhCchhcCCcCceEEECcCHhhcCCCC
Confidence            4455555666 899999999999999999999999999999999999876544

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=7.8e-44  Score=295.95  Aligned_cols=231  Identities=26%  Similarity=0.340  Sum_probs=196.1

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEE
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMY   94 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv   94 (272)
                      +|++|||||++|||++++++|+++|++|++++|+++.         .+...+++|+++......+........ ..+.++
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~---------~~~~~~~~d~~~~~~~~~~~~~~~~~~-~~~~~~   70 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREG---------EDLIYVEGDVTREEDVRRAVARAQEEA-PLFAVV   70 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS---------SSSEEEECCTTCHHHHHHHHHHHHHHS-CEEEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc---------ccceEeeccccchhhhHHHHHhhhccc-cccchh
Confidence            5999999999999999999999999999999998653         456788999999999999888877765 455666


Q ss_pred             eCCCCCCC--CCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHh------hcCCCCceEEEEecccccccCCCCchhhhh
Q 024145           95 NNAGILDR--SFGSILDTPKSDLERLINVNTIGGFLGAKHAARV------MVPQQKGCILFTASACTEIAGLGSPAYTIS  166 (272)
Q Consensus        95 ~~ag~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~~~g~iv~iss~~~~~~~~~~~~Y~~s  166 (272)
                      ++++....  ........+.+.+++++++|+.+++.+++.+.+.      |.+++.|+||++||..+..+.++...|++|
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~~~Y~as  150 (241)
T d1uaya_          71 SAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAAS  150 (241)
T ss_dssp             ECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHHHHHH
T ss_pred             hhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCCCchhhHHH
Confidence            66664432  2245567788999999999999999999999988      555678999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCc
Q 024145          167 KYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYV  246 (272)
Q Consensus       167 K~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  246 (272)
                      |+|+++|+|++|.|++++|||||+|+||+++|++...  ...+...+. ....++.+|+.+|||+|++++||+|  ++|+
T Consensus       151 Kaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~--~~~~~~~~~-~~~~~~~~R~g~pedvA~~v~fL~s--~~~i  225 (241)
T d1uaya_         151 KGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQG--LPEKAKASL-AAQVPFPPRLGRPEEYAALVLHILE--NPML  225 (241)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHT--SCHHHHHHH-HTTCCSSCSCCCHHHHHHHHHHHHH--CTTC
T ss_pred             HHHHHHHHHHHHHHHhhcCCceeeecCCcccccccch--hhhhHHHHH-HhcCCCCCCCcCHHHHHHHHHHHHh--CCCC
Confidence            9999999999999999999999999999999999874  223333333 3334445899999999999999998  4799


Q ss_pred             cccEEEecCceeec
Q 024145          247 SGQNLVVDGGFSVV  260 (272)
Q Consensus       247 ~G~~i~~dgG~~~~  260 (272)
                      |||+|.||||+++.
T Consensus       226 TG~~i~VDGG~~m~  239 (241)
T d1uaya_         226 NGEVVRLDGALRMA  239 (241)
T ss_dssp             CSCEEEESTTCCCC
T ss_pred             CCCEEEECCcccCC
Confidence            99999999998754

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=100.00  E-value=6.6e-43  Score=295.97  Aligned_cols=248  Identities=22%  Similarity=0.247  Sum_probs=197.9

Q ss_pred             CCCCcEEEEeCCCC--hHHHHHHHHHHHcCCeEEEeecCcchHHHHHH--HhCCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           12 RLEGKVAIITGGAS--GIGAMAVELFHENGAKVVIADVQDKLGEDLAD--KLGQDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        12 ~l~~k~vlItGas~--giG~aia~~la~~G~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      .|+||++|||||+|  |||+++|++|+++|++|++++|+++..+...+  +.+....++.+|+++.++++++++++.+.+
T Consensus         2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   81 (274)
T d2pd4a1           2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDL   81 (274)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHc
Confidence            47999999999865  99999999999999999999998653332221  224567889999999999999999999999


Q ss_pred             CCccEEEeCCCCCCCC--CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhh
Q 024145           88 GKLDIMYNNAGILDRS--FGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTI  165 (272)
Q Consensus        88 g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~  165 (272)
                      |++|++|+|+|.....  .....+..++.+...+.++..+.+...+...+.+  +..+.|+++|+.....+.+....|++
T Consensus        82 g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~s~~~~~~~~~~~~~y~a  159 (274)
T d2pd4a1          82 GSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLL--NNGASVLTLSYLGSTKYMAHYNVMGL  159 (274)
T ss_dssp             SCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE--EEEEEEEEEECGGGTSBCTTCHHHHH
T ss_pred             CCCCeEEeecccccccccccccccccchhhhhhhcccccccccccccccccc--ccCcceeeecccccccccccchhhhH
Confidence            9999999999986542  1334445556666666666666666655555443  23345666677677778888899999


Q ss_pred             hHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCC
Q 024145          166 SKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSY  245 (272)
Q Consensus       166 sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  245 (272)
                      ||+|+++++|+++.|++++|||||+|+||+++|++..... ..++.........++ +|+.+|||+|++++||+|+++++
T Consensus       160 sK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~-~~~~~~~~~~~~~p~-~r~~~pedIA~~v~fL~S~~s~~  237 (274)
T d2pd4a1         160 AKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIA-DFRMILKWNEINAPL-RKNVSLEEVGNAGMYLLSSLSSG  237 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGST-THHHHHHHHHHHSTT-SSCCCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccC-chHHHHHHHhhhhhc-cCCcCHHHHHHHHHHHhChhhCC
Confidence            9999999999999999999999999999999999987532 223334444444555 89999999999999999999999


Q ss_pred             ccccEEEecCceeeccCc
Q 024145          246 VSGQNLVVDGGFSVVNPT  263 (272)
Q Consensus       246 ~~G~~i~~dgG~~~~~~~  263 (272)
                      +|||+|.+|||++++...
T Consensus       238 itG~~i~vDGG~~~~g~~  255 (274)
T d2pd4a1         238 VSGEVHFVDAGYHVMGMG  255 (274)
T ss_dssp             CCSCEEEESTTGGGBSSC
T ss_pred             CcCceEEECCChhhccCC
Confidence            999999999999987544

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.2e-44  Score=302.58  Aligned_cols=233  Identities=18%  Similarity=0.201  Sum_probs=186.6

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCeEEE---eecCcchHH---HHHHHh---CCceEEEEecCCCHHHHHHHHHHHHH
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGAKVVI---ADVQDKLGE---DLADKL---GQDVCYIHCDISNEDEVINLVDTAVS   85 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~~V~~---~~r~~~~~~---~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (272)
                      .|++|||||++|||+++|++|+++|++|+.   +.|+.+..+   +..+++   +.++.++.||++|.++++++++++.+
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~   81 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence            488999999999999999999999998554   455544333   333333   45899999999999999999988743


Q ss_pred             HhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhh
Q 024145           86 KFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTI  165 (272)
Q Consensus        86 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~  165 (272)
                        |.+|+||||+|....  +++.+.+.++|++++++|+.|++.++++++|+|.+++.|+||++||..+..+.++...|++
T Consensus        82 --g~idilvnnag~~~~--~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~~~~~~Y~a  157 (285)
T d1jtva_          82 --GRVDVLVCNAGLGLL--GPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCA  157 (285)
T ss_dssp             --SCCSEEEECCCCCCC--SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHHH
T ss_pred             --cchhhhhhccccccc--ccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCCCCchHHHH
Confidence              789999999998766  7889999999999999999999999999999999988999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHH---------HHHh---h-cCCCCCCCCChHhHH
Q 024145          166 SKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIE---------SSMS---Q-MGNLKGEFLKTDGIA  232 (272)
Q Consensus       166 sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~---------~~~~---~-~~~~~~~~~~~~dva  232 (272)
                      ||+|+++|+++++.|++++||+||+|+||+++|++.......+++..         +..+   . ...+..+..+|||||
T Consensus       158 sKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PeeVA  237 (285)
T d1jtva_         158 SKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVA  237 (285)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhhhhcccCCCHHHHH
Confidence            99999999999999999999999999999999999875444333211         1111   0 001114678999999


Q ss_pred             HHHHHHhcCCC---CCccccEE
Q 024145          233 NAALYLASDES---SYVSGQNL  251 (272)
Q Consensus       233 ~~~~~l~s~~~---~~~~G~~i  251 (272)
                      ++++++++...   .+++|+.+
T Consensus       238 ~~v~~~~~~~~p~~ry~~g~~~  259 (285)
T d1jtva_         238 EVFLTALRAPKPTLRYFTTERF  259 (285)
T ss_dssp             HHHHHHHHCSSCCSEEESCSTT
T ss_pred             HHHHHHHhCCCCCeEEecHHHH
Confidence            99999986543   45666543

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=100.00  E-value=3.5e-43  Score=296.59  Aligned_cols=246  Identities=21%  Similarity=0.253  Sum_probs=205.2

Q ss_pred             CCCCcEEEEeCC--CChHHHHHHHHHHHcCCeEEEeecCcchH-HHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHh-
Q 024145           12 RLEGKVAIITGG--ASGIGAMAVELFHENGAKVVIADVQDKLG-EDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKF-   87 (272)
Q Consensus        12 ~l~~k~vlItGa--s~giG~aia~~la~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   87 (272)
                      .|+||++|||||  ++|||+++|++|+++|++|++++|++++. +++.++++.+...+++|++++++++++++.+.+.+ 
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~   82 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIG   82 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhccc
Confidence            479999999995  57999999999999999999999988765 44556677788999999999999999999998765 


Q ss_pred             --CCccEEEeCCCCCCC---CCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCch
Q 024145           88 --GKLDIMYNNAGILDR---SFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPA  162 (272)
Q Consensus        88 --g~id~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  162 (272)
                        +.+|+++||+|....   ...++.+.+.+++.+.+.+|+.+.+...+...+++.   .+.+++++|.....+.|.+..
T Consensus        83 ~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~~s~~~~~~~p~~~~  159 (268)
T d2h7ma1          83 AGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMN---PGGSIVGMDFDPSRAMPAYNW  159 (268)
T ss_dssp             TTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE---EEEEEEEEECCCSSCCTTTHH
T ss_pred             cCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcc---cccccccccccccccCcccch
Confidence              679999999997643   124567888999999999999999999888877653   345677777788888899999


Q ss_pred             hhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCC---CCh------hHHHHHHhhcCCCCCCCCChHhHHH
Q 024145          163 YTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGG---VDP------ALIESSMSQMGNLKGEFLKTDGIAN  233 (272)
Q Consensus       163 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~---~~~------~~~~~~~~~~~~~~~~~~~~~dva~  233 (272)
                      |+++|+|+++|+++++.|++++|||||+|+||+++|++.....   ...      +...+......|+.+++.+|+|+|+
T Consensus       160 y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~rr~~~p~dva~  239 (268)
T d2h7ma1         160 MTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVAK  239 (268)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTTCCHHHHH
T ss_pred             hhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcCCCCCCCCCHHHHHH
Confidence            9999999999999999999999999999999999999764211   111      1222233344555466999999999


Q ss_pred             HHHHHhcCCCCCccccEEEecCceeec
Q 024145          234 AALYLASDESSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       234 ~~~~l~s~~~~~~~G~~i~~dgG~~~~  260 (272)
                      ++.||+|+.++++|||+|.||||++.+
T Consensus       240 ~v~fL~Sd~a~~iTG~~i~vDGG~~~~  266 (268)
T d2h7ma1         240 TVCALLSDWLPATTGDIIYADGGAHTQ  266 (268)
T ss_dssp             HHHHHHSSSCTTCCSEEEEESTTGGGC
T ss_pred             HHHHHhCchhcCccCCEEEECcCcccc
Confidence            999999999999999999999999865

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=100.00  E-value=8.2e-42  Score=287.70  Aligned_cols=237  Identities=25%  Similarity=0.338  Sum_probs=194.8

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcch-HHHHHHHh----CCceEEEEecCC----CHHHHHHHHHHHHHHh
Q 024145           17 VAIITGGASGIGAMAVELFHENGAKVVIADVQDKL-GEDLADKL----GQDVCYIHCDIS----NEDEVINLVDTAVSKF   87 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~-~~~~~~~~----~~~~~~~~~D~~----~~~~~~~~~~~~~~~~   87 (272)
                      ++|||||++|||++++++|+++|++|++++|+.+. .+++.+++    +.+...+.+|+.    ..+.++++++.+.+++
T Consensus         3 vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAF   82 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHHh
Confidence            79999999999999999999999999999998654 34444444    556777776554    4677888889999999


Q ss_pred             CCccEEEeCCCCCCCCCCCC-----------CCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcC-----CCCceEEEEecc
Q 024145           88 GKLDIMYNNAGILDRSFGSI-----------LDTPKSDLERLINVNTIGGFLGAKHAARVMVP-----QQKGCILFTASA  151 (272)
Q Consensus        88 g~id~lv~~ag~~~~~~~~~-----------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~~~g~iv~iss~  151 (272)
                      |++|++|||||+..+  .++           .+...+.+...+..|+.+.+...+...+.+..     ...+.++.+++.
T Consensus        83 g~iDilvnnAG~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (266)
T d1mxha_          83 GRCDVLVNNASAYYP--TPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDA  160 (266)
T ss_dssp             SCCCEEEECCCCCCC--CCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCG
T ss_pred             CCCCEEEECCccCCC--Ccccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhc
Confidence            999999999998765  222           22335567788999999999999988887754     245778889999


Q ss_pred             cccccCCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhH
Q 024145          152 CTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGI  231 (272)
Q Consensus       152 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  231 (272)
                      .+..+.+++..|++||+|+++|++++|.|++++|||||+|+||+++|++..     +++..+.+....++.+++.+|||+
T Consensus       161 ~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~-----~~~~~~~~~~~~pl~r~~~~peev  235 (266)
T d1mxha_         161 MTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAM-----PQETQEEYRRKVPLGQSEASAAQI  235 (266)
T ss_dssp             GGGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSS-----CHHHHHHHHTTCTTTSCCBCHHHH
T ss_pred             cccccCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccC-----CHHHHHHHHhcCCCCCCCCCHHHH
Confidence            999999999999999999999999999999999999999999999998754     233344444555664556899999


Q ss_pred             HHHHHHHhcCCCCCccccEEEecCceeec
Q 024145          232 ANAALYLASDESSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       232 a~~~~~l~s~~~~~~~G~~i~~dgG~~~~  260 (272)
                      |++++||+|++++|+|||+|.+|||+++.
T Consensus       236 a~~v~fL~s~~s~~itG~~i~vDGG~~l~  264 (266)
T d1mxha_         236 ADAIAFLVSKDAGYITGTTLKVDGGLILA  264 (266)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHHHHhCchhCCccCCeEEECccHhhh
Confidence            99999999999999999999999999874

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-42  Score=293.78  Aligned_cols=217  Identities=24%  Similarity=0.274  Sum_probs=188.0

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHc-CCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Q 024145           16 KVAIITGGASGIGAMAVELFHEN-GAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   91 (272)
                      +++|||||++|||+++|++|+++ |++|++++|+.+++++..+++   +.++.++.||++|.++++++++++.+++|++|
T Consensus         4 rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~iD   83 (275)
T d1wmaa1           4 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLD   83 (275)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred             eEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCCcE
Confidence            46799999999999999999986 899999999999988887766   56899999999999999999999999999999


Q ss_pred             EEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccC--------------
Q 024145           92 IMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAG--------------  157 (272)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~--------------  157 (272)
                      +||||||+..+  ....+.+.++|+++|++|+.+++.+++.++|+|++  .|+||++||..+..+.              
T Consensus        84 iLVnNAGi~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~--~g~ivnisS~~~~~~~~~~~~y~~~k~~~~  159 (275)
T d1wmaa1          84 VLVNNAGIAFK--VADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP--QGRVVNVSSIMSVRALKSCSPELQQKFRSE  159 (275)
T ss_dssp             EEEECCCCCCC--TTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHHHHHHTSCHHHHHHHHCS
T ss_pred             EEEEcCCcCCC--CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCcccccccceeccccccchhhhhhhccc
Confidence            99999998766  66778888999999999999999999999999964  5999999998664321              


Q ss_pred             ---------------------------CCCchhhhhHHHHHHHHHHHHHHhcC----CCcEEEEEeCCcccCCcccCCCC
Q 024145          158 ---------------------------LGSPAYTISKYGILGLVKCLAAELGQ----YGIRVNCVSPYGLATGMSMKGGV  206 (272)
Q Consensus       158 ---------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~----~gi~v~~i~Pg~v~t~~~~~~~~  206 (272)
                                                 .....|++||+++.+|++.+++|+++    .||+||+|+||+++|+|.+.   
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~~~---  236 (275)
T d1wmaa1         160 TITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP---  236 (275)
T ss_dssp             SCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT---
T ss_pred             ccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCcccC---
Confidence                                       12346999999999999999999865    49999999999999999762   


Q ss_pred             ChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHh--cCCCCCccccEEEecCc
Q 024145          207 DPALIESSMSQMGNLKGEFLKTDGIANAALYLA--SDESSYVSGQNLVVDGG  256 (272)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~--s~~~~~~~G~~i~~dgG  256 (272)
                                      ....+|||+|+.+++++  +++..+++|+++. |.+
T Consensus       237 ----------------~~~~~pee~A~~~~~~a~~~~~~~~~~G~~~~-~~~  271 (275)
T d1wmaa1         237 ----------------KATKSPEEGAETPVYLALLPPDAEGPHGQFVS-EKR  271 (275)
T ss_dssp             ----------------TCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE-TTE
T ss_pred             ----------------cccCCHHHHHHHHHHHHcCChhhcCCCeEEEE-CCE
Confidence                            12357999999999986  4566788999886 543

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=100.00  E-value=4.2e-42  Score=286.96  Aligned_cols=222  Identities=21%  Similarity=0.218  Sum_probs=185.6

Q ss_pred             cEEEEeCCCChHHHHHHHHHH---HcCCeEEEeecCcchHHHHHHHh--CCceEEEEecCCCHHHHHHHHHHHHH--HhC
Q 024145           16 KVAIITGGASGIGAMAVELFH---ENGAKVVIADVQDKLGEDLADKL--GQDVCYIHCDISNEDEVINLVDTAVS--KFG   88 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la---~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~--~~g   88 (272)
                      |++|||||++|||++++++|+   ++|++|++++|+++.++++.+..  +.++.++.||++|+++++++++++++  +++
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~   82 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKDQ   82 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGGG
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhcC
Confidence            799999999999999999996   47999999999998877665432  56899999999999999999999865  678


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCC-----------CCceEEEEecccccc--
Q 024145           89 KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQ-----------QKGCILFTASACTEI--  155 (272)
Q Consensus        89 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----------~~g~iv~iss~~~~~--  155 (272)
                      ++|+||||||+.... ..+.+.+.++|++++++|+.+++.++++++|+|+++           ..|++|+++|..+..  
T Consensus        83 ~iDiLvnNAg~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~~~  161 (248)
T d1snya_          83 GLNVLFNNAGIAPKS-ARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQG  161 (248)
T ss_dssp             CCSEEEECCCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTT
T ss_pred             CcceEEeeccccccC-cccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccccCC
Confidence            999999999986552 567889999999999999999999999999999753           479999999988764  


Q ss_pred             -cCCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHH
Q 024145          156 -AGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANA  234 (272)
Q Consensus       156 -~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  234 (272)
                       +.+++..|++||+|+.+|+++++.|++++||+||+|+||+++|+|....                  .. .++++.++.
T Consensus       162 ~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m~~~~------------------~~-~~~~~~~~~  222 (248)
T d1snya_         162 NTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSS------------------AP-LDVPTSTGQ  222 (248)
T ss_dssp             CCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCTT------------------CS-BCHHHHHHH
T ss_pred             CCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCccccc------------------CC-CCchHHHHH
Confidence             3456779999999999999999999999999999999999999997631                  11 234444444


Q ss_pred             HHHHhcCCCCCccccEEEecCce
Q 024145          235 ALYLASDESSYVSGQNLVVDGGF  257 (272)
Q Consensus       235 ~~~l~s~~~~~~~G~~i~~dgG~  257 (272)
                      ++.++.......+|++|.+||+.
T Consensus       223 i~~~i~~l~~~~tG~~i~~dG~~  245 (248)
T d1snya_         223 IVQTISKLGEKQNGGFVNYDGTP  245 (248)
T ss_dssp             HHHHHHHCCGGGTTCEECTTSCB
T ss_pred             HHHHHHhcCccCCCcEEEECCeE
Confidence            44444444445689999999875

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=7.6e-42  Score=285.73  Aligned_cols=224  Identities=17%  Similarity=0.207  Sum_probs=184.9

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCC--eEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCC-
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGA--KVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGK-   89 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~-   89 (272)
                      |+.|+||||||++|||++++++|+++|+  +|++++|+.+.++++.+..+.++.++.+|+++.++++++++++.+.++. 
T Consensus         1 M~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~   80 (250)
T d1yo6a1           1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSD   80 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGG
T ss_pred             CcCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCC
Confidence            3569999999999999999999999996  6889999999888887777788999999999999999999999998764 


Q ss_pred             -ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCC-----------CCceEEEEecccccccC
Q 024145           90 -LDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQ-----------QKGCILFTASACTEIAG  157 (272)
Q Consensus        90 -id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----------~~g~iv~iss~~~~~~~  157 (272)
                       +|+||||||+..+. .++.+.+.++|++.+++|+.|++.+++.++|+|+++           ..++++++++.......
T Consensus        81 ~idilinnAG~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~  159 (250)
T d1yo6a1          81 GLSLLINNAGVLLSY-GTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITD  159 (250)
T ss_dssp             CCCEEEECCCCCCCB-CTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTT
T ss_pred             CeEEEEEcCcccCCC-CccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccccC
Confidence             99999999986542 567889999999999999999999999999999653           34789998887655432


Q ss_pred             -------CCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHh
Q 024145          158 -------LGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDG  230 (272)
Q Consensus       158 -------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  230 (272)
                             .+...|++||+|+.+|+++++.|++++||+||+|+||+++|+|...                   ....+||+
T Consensus       160 ~~~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~~-------------------~~~~~~e~  220 (250)
T d1yo6a1         160 NTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK-------------------NAALTVEQ  220 (250)
T ss_dssp             CCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC--------------------------------HH
T ss_pred             CcccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCCC-------------------CCCCCHHH
Confidence                   2334699999999999999999999999999999999999998752                   12357899


Q ss_pred             HHHHHHHHhcCCCCCccccEEEecCc
Q 024145          231 IANAALYLASDESSYVSGQNLVVDGG  256 (272)
Q Consensus       231 va~~~~~l~s~~~~~~~G~~i~~dgG  256 (272)
                      .+..++.++.......+|++|..||.
T Consensus       221 ~a~~~~~~~~~~~~~~sG~f~~~~g~  246 (250)
T d1yo6a1         221 STAELISSFNKLDNSHNGRFFMRNLK  246 (250)
T ss_dssp             HHHHHHHHHTTCCGGGTTCEEETTEE
T ss_pred             HHHHHHHHHhcCCCCCCeEEECCCCe
Confidence            99999998877667789999887753

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.1e-41  Score=282.26  Aligned_cols=228  Identities=15%  Similarity=0.147  Sum_probs=193.1

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhC--Ccc
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFG--KLD   91 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g--~id   91 (272)
                      +||++|||||++|||++++++|+++|++|+++++++...       ......+.+|..+.++++.+.+.+.+.++  ++|
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD   73 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE-------ASASVIVKMTDSFTEQADQVTAEVGKLLGDQKVD   73 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTT-------SSEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc-------ccccceeecccCcHHHHHHHHHHHHHHhCCCCce
Confidence            589999999999999999999999999999998876531       23455677888889999988888877654  699


Q ss_pred             EEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHHH
Q 024145           92 IMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGIL  171 (272)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~  171 (272)
                      +||||||.... .....+.+.++|++++++|+.+++.+++.++|+|++  .|+||++||..+..+.+++..|++||+|++
T Consensus        74 ~lInnAG~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~--~G~Iv~isS~~~~~~~~~~~~Y~asKaal~  150 (236)
T d1dhra_          74 AILCVAGGWAG-GNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE--GGLLTLAGAKAALDGTPGMIGYGMAKGAVH  150 (236)
T ss_dssp             EEEECCCCCCC-BCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHHHHHH
T ss_pred             EEEECCccccc-ccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhccc--ccceeEEccHHHcCCccCCcccHHHHHHHH
Confidence            99999996543 145667778999999999999999999999999964  599999999999999999999999999999


Q ss_pred             HHHHHHHHHhc--CCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCcccc
Q 024145          172 GLVKCLAAELG--QYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSGQ  249 (272)
Q Consensus       172 ~~~~~la~e~~--~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  249 (272)
                      +|+++++.|++  ++||+||+|+||+++||+.+...          .  .....++.+||++++.+.+|+++...+++|+
T Consensus       151 ~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~~~~~----------~--~~~~~~~~~pe~va~~~~~l~s~~~~~i~G~  218 (236)
T d1dhra_         151 QLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSM----------P--EADFSSWTPLEFLVETFHDWITGNKRPNSGS  218 (236)
T ss_dssp             HHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHS----------T--TSCGGGSEEHHHHHHHHHHHHTTTTCCCTTC
T ss_pred             HHHHHHHHHhccCCCcEEEEEEEeccCcCCcchhhC----------c--cchhhcCCCHHHHHHHHHHHhCCCccCCCCC
Confidence            99999999998  57999999999999999865211          0  1112567889999999999999999999999


Q ss_pred             EEEe--cCceeeccCc
Q 024145          250 NLVV--DGGFSVVNPT  263 (272)
Q Consensus       250 ~i~~--dgG~~~~~~~  263 (272)
                      .+.|  ++|.+-..|.
T Consensus       219 ~i~v~~~~g~t~~~p~  234 (236)
T d1dhra_         219 LIQVVTTDGKTELTPA  234 (236)
T ss_dssp             EEEEEEETTEEEEEEE
T ss_pred             eEEEEEECCEEEEEec
Confidence            8776  5666555454

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.8e-40  Score=277.03  Aligned_cols=213  Identities=18%  Similarity=0.195  Sum_probs=188.6

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh----CCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL----GQDVCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      |+||++||||||+|||+++|++|+++|++|++++|+++.++++.+++    +.....+.+|+++.++++.+.+.+.+.++
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g   91 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG   91 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhC
Confidence            89999999999999999999999999999999999999888776654    56788999999999999999999999999


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHH
Q 024145           89 KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKY  168 (272)
Q Consensus        89 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~  168 (272)
                      .+|++++|+|....  ..+.+.+.+++++++++|+.+++.+++.++|+|++ ++|+||++||..+..+.++...|++||+
T Consensus        92 ~~~~li~nag~~~~--~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~-~~G~ii~isS~~~~~~~p~~~~Y~asKa  168 (269)
T d1xu9a_          92 GLDMLILNHITNTS--LNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQ-SNGSIVVVSSLAGKVAYPMVAAYSASKF  168 (269)
T ss_dssp             SCSEEEECCCCCCC--CCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HTCEEEEEEEGGGTSCCTTCHHHHHHHH
T ss_pred             Cccccccccccccc--cccccCCHHHhhhheeeehhhHHHHHHHHHHHHHh-cCCcceEeccchhcCCCCCchHHHHHHH
Confidence            99999999998765  77889999999999999999999999999999974 5799999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhcC--CCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhc
Q 024145          169 GILGLVKCLAAELGQ--YGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLAS  240 (272)
Q Consensus       169 a~~~~~~~la~e~~~--~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  240 (272)
                      |+++|+++++.|+++  .||+||+|+||+++|++......          ...  .....+||+++..++....
T Consensus       169 al~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~~~~~~----------~~~--~~~~~~~e~~a~~i~~~~~  230 (269)
T d1xu9a_         169 ALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVS----------GIV--HMQAAPKEECALEIIKGGA  230 (269)
T ss_dssp             HHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSC----------GGG--GGGCBCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcHHHHhcc----------CCc--cccCCCHHHHHHHHHHHhh
Confidence            999999999999974  57999999999999998652110          000  0234679999998887553

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=6.9e-40  Score=274.60  Aligned_cols=220  Identities=24%  Similarity=0.332  Sum_probs=166.8

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHh-CCccEEE
Q 024145           16 KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKF-GKLDIMY   94 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~id~lv   94 (272)
                      |++|||||++|||++++++|+++|++|++++|+++.              ..+|+.+.+..+....++..+. +.+|++|
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~--------------~~~d~~~~~~~~~~~~~~~~~~~~~id~lv   67 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE--------------VIADLSTAEGRKQAIADVLAKCSKGMDGLV   67 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS--------------EECCTTSHHHHHHHHHHHHTTCTTCCSEEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH--------------HHHHhcCHHHHHHHHHHHHHHhCCCCcEEE
Confidence            799999999999999999999999999999987542              3569999999888766665544 6799999


Q ss_pred             eCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccc-------------------
Q 024145           95 NNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEI-------------------  155 (272)
Q Consensus        95 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~-------------------  155 (272)
                      +|||+...         .+.+.....+|..+...+.+...+.+.+.....+..+++.....                   
T Consensus        68 ~~Ag~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  138 (257)
T d1fjha_          68 LCAGLGPQ---------TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAK  138 (257)
T ss_dssp             ECCCCCTT---------CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHH
T ss_pred             EcCCCCCc---------HHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcEEE
Confidence            99997533         23467788999999999999999988876666666665543211                   


Q ss_pred             ---------cCCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCC
Q 024145          156 ---------AGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFL  226 (272)
Q Consensus       156 ---------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (272)
                               ..++..+|++||+|+++|+|++|.|++++|||||+|+||+++||+.+.....++..+...+...|+ +|+.
T Consensus       139 i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~Pl-gR~g  217 (257)
T d1fjha_         139 ARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPM-GRRA  217 (257)
T ss_dssp             HHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------CCCST-TSCC
T ss_pred             EeeehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCCHHHHHHHHhcCCCC-CCCc
Confidence                     111234699999999999999999999999999999999999999875433333333334444455 9999


Q ss_pred             ChHhHHHHHHHHhcCCCCCccccEEEecCceee
Q 024145          227 KTDGIANAALYLASDESSYVSGQNLVVDGGFSV  259 (272)
Q Consensus       227 ~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~  259 (272)
                      +|||+|++++||+|++++|+|||+|.+|||++.
T Consensus       218 ~p~eva~~v~fL~S~~s~~itG~~i~vDGG~ta  250 (257)
T d1fjha_         218 EPSEMASVIAFLMSPAASYVHGAQIVIDGGIDA  250 (257)
T ss_dssp             CTHHHHHHHHHHTSGGGTTCCSCEEEESTTHHH
T ss_pred             CHHHHHHHHHHHhCchhCCccCceEEeCCCccc
Confidence            999999999999999999999999999999875

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=5.1e-39  Score=266.09  Aligned_cols=223  Identities=19%  Similarity=0.207  Sum_probs=183.8

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHH--hCCccE
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSK--FGKLDI   92 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~--~g~id~   92 (272)
                      +++||||||++|||++++++|+++|++|++++|++...       ......+.+|+.+.++.....+.+...  ++++|+
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~   74 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQ-------ADSNILVDGNKNWTEQEQSILEQTASSLQGSQVDG   74 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTT-------SSEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhc-------ccccceeccccCchhHHHHHHHHHHHHhcCCCeeE
Confidence            35679999999999999999999999999999987532       134456677888888888877777774  588999


Q ss_pred             EEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHHHH
Q 024145           93 MYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILG  172 (272)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~  172 (272)
                      ||||||..... ....+.+.++|+.++++|+.+++.++++++|+|++  .|+||++||..+..+.+++..|++||+|+++
T Consensus        75 linnAG~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~  151 (235)
T d1ooea_          75 VFCVAGGWAGG-SASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP--GGLLQLTGAAAAMGPTPSMIGYGMAKAAVHH  151 (235)
T ss_dssp             EEECCCCCCCB-CTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHHHHHHH
T ss_pred             EEECCcccccc-cccccCcHHHHhhHhhhHHHHHHHHhhhccccccc--ceEEEEeccHHhcCCcccccchHHHHHHHHH
Confidence            99999976441 34556667889999999999999999999999964  5999999999999999999999999999999


Q ss_pred             HHHHHHHHhc--CCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHH-HhcCCCCCcccc
Q 024145          173 LVKCLAAELG--QYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALY-LASDESSYVSGQ  249 (272)
Q Consensus       173 ~~~~la~e~~--~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~-l~s~~~~~~~G~  249 (272)
                      |+++++.|++  +.+|+||+|+||+++|++.+..          +..  ....++.+|+++++.+++ +.+..+.+++|+
T Consensus       152 l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~~~~~----------~~~--~~~~~~~~~~~va~~~~~~l~~~~~~~~tG~  219 (235)
T d1ooea_         152 LTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKW----------MPN--ADHSSWTPLSFISEHLLKWTTETSSRPSSGA  219 (235)
T ss_dssp             HHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHH----------STT--CCGGGCBCHHHHHHHHHHHHHCGGGCCCTTC
T ss_pred             HHHHHHHHhccCCCceEEEEEecCcCcCcchhhh----------CcC--CccccCCCHHHHHHHHHHHhcCccccCCCce
Confidence            9999999998  4789999999999999986521          111  112577899999999875 556677889999


Q ss_pred             EEEe---cCceee
Q 024145          250 NLVV---DGGFSV  259 (272)
Q Consensus       250 ~i~~---dgG~~~  259 (272)
                      .+.+   ||+..+
T Consensus       220 ~i~v~~~~g~~~~  232 (235)
T d1ooea_         220 LLKITTENGTSTI  232 (235)
T ss_dssp             EEEEEEETTEEEE
T ss_pred             EEEEEeeCCEEEE
Confidence            9998   444443

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.98  E-value=1e-31  Score=225.04  Aligned_cols=225  Identities=15%  Similarity=0.183  Sum_probs=172.5

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcc---hHHHHHHH---hCCceEEEEecCCCHHHHHHHHHH
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQDK---LGEDLADK---LGQDVCYIHCDISNEDEVINLVDT   82 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~---~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~   82 (272)
                      .++ .++++|||||++|||++++++|+++|+ +|++++|+..   ..+++.++   .+.++.++.||++|.+++++++++
T Consensus         5 ~~~-p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~   83 (259)
T d2fr1a1           5 EWK-PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGG   83 (259)
T ss_dssp             CCC-CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHT
T ss_pred             ccC-CcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhcc
Confidence            344 456999999999999999999999999 5888998743   33344433   367899999999999999999998


Q ss_pred             HHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCch
Q 024145           83 AVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPA  162 (272)
Q Consensus        83 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  162 (272)
                      +.+. +++|.+|||+|....  .++.+.+.++|++++++|+.+++.+.+.+    ...+.++||++||..+..+.+++..
T Consensus        84 i~~~-~~i~~vv~~ag~~~~--~~~~~~~~~~~~~~~~~~~~g~~~l~~~~----~~~~~~~iv~~SS~a~~~g~~~~~~  156 (259)
T d2fr1a1          84 IGDD-VPLSAVFHAAATLDD--GTVDTLTGERIERASRAKVLGARNLHELT----RELDLTAFVLFSSFASAFGAPGLGG  156 (259)
T ss_dssp             SCTT-SCEEEEEECCCCCCC--CCGGGCCHHHHHHHTHHHHHHHHHHHHHH----TTSCCSEEEEEEEHHHHTCCTTCTT
T ss_pred             cccc-ccccccccccccccc--cccccccHHHHHHHhhhhccchhHHHHHh----hccCCceEeeecchhhccCCcccHH
Confidence            7664 589999999998876  78999999999999999999999887754    3456789999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCC
Q 024145          163 YTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDE  242 (272)
Q Consensus       163 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  242 (272)
                      |+++|+++++|++.++.    .|+++++|+||++.++....     ....+.+....   -..++|+++++++..++...
T Consensus       157 YaAaka~l~~la~~~~~----~Gi~v~~I~pg~~~~~g~~~-----~~~~~~~~~~G---~~~~~~~~~~~~l~~~l~~~  224 (259)
T d2fr1a1         157 YAPGNAYLDGLAQQRRS----DGLPATAVAWGTWAGSGMAE-----GPVADRFRRHG---VIEMPPETACRALQNALDRA  224 (259)
T ss_dssp             THHHHHHHHHHHHHHHH----TTCCCEEEEECCBC-----------------CTTTT---EECBCHHHHHHHHHHHHHTT
T ss_pred             HHHHHHhHHHHHHHHHh----CCCCEEECCCCcccCCcccc-----chHHHHHHhcC---CCCCCHHHHHHHHHHHHhCC
Confidence            99999999988776654    59999999999887654331     11112221111   13478999999999888654


Q ss_pred             CCCccccEEEecCc
Q 024145          243 SSYVSGQNLVVDGG  256 (272)
Q Consensus       243 ~~~~~G~~i~~dgG  256 (272)
                      .  ....++.+|..
T Consensus       225 ~--~~~~v~~~d~~  236 (259)
T d2fr1a1         225 E--VCPIVIDVRWD  236 (259)
T ss_dssp             C--SSCEECEECHH
T ss_pred             C--ceEEEEeCcHH
Confidence            3  23445566644

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.90  E-value=1.9e-22  Score=175.58  Aligned_cols=225  Identities=12%  Similarity=0.097  Sum_probs=161.2

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcc-----hHHHHHH---HhCCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           16 KVAIITGGASGIGAMAVELFHENGAKVVIADVQDK-----LGEDLAD---KLGQDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~-----~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      |+||||||||.||++++++|+++|++|++++|...     +.+.+.+   ....++.++++|++|.+++++++...    
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----   77 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV----   77 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH----
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhcc----
Confidence            89999999999999999999999999999998543     2222222   22457999999999999999888765    


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccc-----------c
Q 024145           88 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEI-----------A  156 (272)
Q Consensus        88 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~-----------~  156 (272)
                       .+|+++|.|+.....      .+.++....+++|+.++.++++++...-.+ +..++|++||...+.           +
T Consensus        78 -~~d~v~h~aa~~~~~------~~~~~~~~~~~~Nv~gt~nllea~~~~~~~-~~~r~i~~SS~~vYG~~~~~~~~E~~~  149 (357)
T d1db3a_          78 -QPDEVYNLGAMSHVA------VSFESPEYTADVDAMGTLRLLEAIRFLGLE-KKTRFYQASTSELYGLVQEIPQKETTP  149 (357)
T ss_dssp             -CCSEEEECCCCCTTT------TTTSCHHHHHHHHTHHHHHHHHHHHHTTCT-TTCEEEEEEEGGGGTTCCSSSBCTTSC
T ss_pred             -CCCEEEEeecccccc------hhhhCHHHHHHHHHHHHHHHHHHHHHhCCC-CCcEEEEEEchhhhCCCCCCCcCCCCC
Confidence             789999999976541      233556778999999999999988765432 456799999865321           1


Q ss_pred             CCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHH----hhcC--------CCCCC
Q 024145          157 GLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSM----SQMG--------NLKGE  224 (272)
Q Consensus       157 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~----~~~~--------~~~~~  224 (272)
                      ..+...|+.||.+.|.+++.+++.+   |+.+..++|+.+.+|...... ........+    ....        ...+.
T Consensus       150 ~~P~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~vyGp~~~~~~-~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~  225 (357)
T d1db3a_         150 FYPRSPYAVAKLYAYWITVNYRESY---GMYACNGILFNHESPRRGETF-VTRKITRAIANIAQGLESCLYLGNMDSLRD  225 (357)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTS-HHHHHHHHHHHHHTTSCCCEEESCTTCEEC
T ss_pred             CCCCChHHHHHHHHHHHHHHHHHHh---CCCEEEEEeccccCCCCCcCC-CchHHHHHHHHHHhCCCceEEECCCCeeec
Confidence            1234589999999999999999884   789999999999998643211 111121211    1111        11135


Q ss_pred             CCChHhHHHHHHHHhcCCCCCccccEEEecCceeec
Q 024145          225 FLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       225 ~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~  260 (272)
                      +...+|++++++.++...    .|+.+++..|....
T Consensus       226 ~~~v~D~~~a~~~~~~~~----~~~~yni~sg~~~s  257 (357)
T d1db3a_         226 WGHAKDYVKMQWMMLQQE----QPEDFVIATGVQYS  257 (357)
T ss_dssp             CEEHHHHHHHHHHTTSSS----SCCCEEECCCCCEE
T ss_pred             ceeechHHHHHHHHHhCC----CCCeEEECCCCcee
Confidence            788999999998877543    56788888887764

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.84  E-value=1.7e-19  Score=158.50  Aligned_cols=223  Identities=12%  Similarity=0.019  Sum_probs=153.7

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCc--------------------chHHHHHHHhCCceEEEEecCCCHH
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGAKVVIADVQD--------------------KLGEDLADKLGQDVCYIHCDISNED   74 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~--------------------~~~~~~~~~~~~~~~~~~~D~~~~~   74 (272)
                      ||+||||||+|.||.+++++|+++|++|++++.-.                    ..........+.++.++.+|++|.+
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~   80 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE   80 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHH
Confidence            78999999999999999999999999999886210                    1111222233678999999999999


Q ss_pred             HHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccccc
Q 024145           75 EVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTE  154 (272)
Q Consensus        75 ~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~  154 (272)
                      .++++++..     ++|+|||.|+....   .......+.....+++|+.++.++++.+...-.+   .++++.||....
T Consensus        81 ~l~~~~~~~-----~~d~ViHlAa~~~~---~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~---~~~i~~ss~~~~  149 (393)
T d1i24a_          81 FLAESFKSF-----EPDSVVHFGEQRSA---PYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEE---CHLVKLGTMGEY  149 (393)
T ss_dssp             HHHHHHHHH-----CCSEEEECCSCCCH---HHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTT---CEEEEECCGGGG
T ss_pred             HHHHHHHhh-----cchheecccccccc---ccccccccccccccccccccccHHHHHHHHhccc---cceeeccccccc
Confidence            999888865     79999999987543   1223445667788999999999999988764432   345666655332


Q ss_pred             c------------------------cCCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCC----
Q 024145          155 I------------------------AGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGV----  206 (272)
Q Consensus       155 ~------------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~----  206 (272)
                      .                        +......|+.||.+.|.+++.++.+   +++.+.+++|+.+..|.......    
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~---~~l~~~~lR~~~v~G~~~~~~~~~~~~  226 (393)
T d1i24a_         150 GTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVYGVKTDETEMHEEL  226 (393)
T ss_dssp             CCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHH---HCCEEEEEEECEEECSCCTTGGGSGGG
T ss_pred             cccccccccccccccccccccccccccccccHHHHHhhhhcccccccccc---cceeeeecccccccCCCcccccccccc
Confidence            1                        1122346999999999999999887   47999999999888875332100    


Q ss_pred             -------------ChhHHHHHHhhc-------CCCCCCCCChHhHHHHHHHHhcCCCCCccccEEEe
Q 024145          207 -------------DPALIESSMSQM-------GNLKGEFLKTDGIANAALYLASDESSYVSGQNLVV  253 (272)
Q Consensus       207 -------------~~~~~~~~~~~~-------~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~  253 (272)
                                   ............       ....+.++..+|++.++..++.....  .|+...+
T Consensus       227 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~~~~~--~g~~~~~  291 (393)
T d1i24a_         227 RNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAK--AGEFRVF  291 (393)
T ss_dssp             CCCCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCC--TTCEEEE
T ss_pred             ccccccccccccchhhhhHHhhcCCeeEEeeecccccccccccchHHHHHHHHHhhcc--cceeeee
Confidence                         011122222211       11123567899999999988865433  4555433

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.84  E-value=2.5e-20  Score=162.30  Aligned_cols=226  Identities=17%  Similarity=0.151  Sum_probs=162.0

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCeEE-EeecCcch--HHHHHHHh--CCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Q 024145           17 VAIITGGASGIGAMAVELFHENGAKVV-IADVQDKL--GEDLADKL--GQDVCYIHCDISNEDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~~V~-~~~r~~~~--~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   91 (272)
                      +||||||+|.||++++++|+++|++|+ ++++....  .+.+ +.+  ..++.++++|++|+++++++++..     ++|
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-----~~d   75 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESL-SDISESNRYNFEHADICDSAEITRIFEQY-----QPD   75 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGG-TTTTTCTTEEEEECCTTCHHHHHHHHHHH-----CCS
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHH-HhhhhcCCcEEEEccCCCHHHHHHHHHhC-----CCC
Confidence            589999999999999999999999854 45543211  1111 112  347999999999999998887754     799


Q ss_pred             EEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCC-----CCceEEEEeccccccc----------
Q 024145           92 IMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQ-----QKGCILFTASACTEIA----------  156 (272)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~g~iv~iss~~~~~~----------  156 (272)
                      +|||+|+....      ..+.++....+++|+.++..+++.+.......     +..++|++||......          
T Consensus        76 ~VihlAa~~~~------~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~  149 (361)
T d1kewa_          76 AVMHLAAESHV------DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENS  149 (361)
T ss_dssp             EEEECCSCCCH------HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTT
T ss_pred             EEEECccccch------hhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccc
Confidence            99999986542      12234556789999999999999988765432     3457999999764321          


Q ss_pred             -----------CCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCC-C---
Q 024145          157 -----------GLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGN-L---  221 (272)
Q Consensus       157 -----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~---  221 (272)
                                 ......|+.||.+.+.+++.++..+   |+.+.+++|+.+.+|........+..+......... .   
T Consensus       150 ~~~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~---~i~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~g~~~~v~g~  226 (361)
T d1kewa_         150 VTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGK  226 (361)
T ss_dssp             SCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETT
T ss_pred             cCCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEecCceECcCCCcCcHHHHHHHHHHcCCCcEEeCC
Confidence                       1123469999999999999999874   799999999999998654311112333333333211 1   


Q ss_pred             ---CCCCCChHhHHHHHHHHhcCCCCCccccEEEecCceeec
Q 024145          222 ---KGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       222 ---~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~  260 (272)
                         .+.++..+|+|+++..++....   .|+.+++..|....
T Consensus       227 g~~~r~~i~v~D~a~ai~~~~~~~~---~~~~~Ni~s~~~~s  265 (361)
T d1kewa_         227 GDQIRDWLYVEDHARALHMVVTEGK---AGETYNIGGHNEKK  265 (361)
T ss_dssp             SCCEEEEEEHHHHHHHHHHHHHHCC---TTCEEEECCCCEEE
T ss_pred             CCeEEeCEEHHHHHHHHHHHHhcCC---CCCeEEECCCCCcc
Confidence               1246789999999998886543   47889998887654

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.83  E-value=3.6e-19  Score=153.35  Aligned_cols=228  Identities=14%  Similarity=0.112  Sum_probs=160.2

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcc----hHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Q 024145           17 VAIITGGASGIGAMAVELFHENGAKVVIADVQDK----LGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDI   92 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   92 (272)
                      ++|||||+|+||+++++.|+++|++|++++|...    ...........++.++++|++|.+.++++++..     ++|+
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-----~~d~   76 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDH-----AIDT   76 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHT-----TCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhcc-----CCCE
Confidence            5999999999999999999999999999876322    222222333568999999999999988877753     6999


Q ss_pred             EEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccC------------CCC
Q 024145           93 MYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAG------------LGS  160 (272)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~------------~~~  160 (272)
                      |||.|+....      ..+.++..+.+++|+.++..+++++...-    -.++|++||.....+.            ...
T Consensus        77 ViHlAa~~~~------~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~----v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p~  146 (338)
T d1udca_          77 VIHFAGLKAV------GESVQKPLEYYDNNVNGTLRLISAMRAAN----VKNFIFSSSATVYGDQPKIPYVESFPTGTPQ  146 (338)
T ss_dssp             EEECCSCCCH------HHHHHCHHHHHHHHHHHHHHHHHHHHHHT----CCEEEEEEEGGGGCSCCSSSBCTTSCCCCCS
T ss_pred             EEECCCccch------hhHHhCHHHHHHhHHHHHHHHHHHHHHhC----CCEEEecCcceEEccccccccccccccCCCc
Confidence            9999996532      12344567899999999999999887653    3469999887654321            235


Q ss_pred             chhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCC-----Chh-HHHHHHh----hcCC----------
Q 024145          161 PAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGV-----DPA-LIESSMS----QMGN----------  220 (272)
Q Consensus       161 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~-----~~~-~~~~~~~----~~~~----------  220 (272)
                      ..|+.+|.+.+.+++....++  .++.+..++|+.+.++.......     ... .......    ...+          
T Consensus       147 ~~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~  224 (338)
T d1udca_         147 SPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPT  224 (338)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHS--TTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSS
T ss_pred             chHHHHHhhhhHHHHHHHhhc--cCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCccc
Confidence            589999999999999888774  47899999999988875432110     001 1111111    1000          


Q ss_pred             ----CCCCCCChHhHHHHHHHHhcCCCCCccccEEEecCceeecc
Q 024145          221 ----LKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVVN  261 (272)
Q Consensus       221 ----~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~  261 (272)
                          ..+.+...+|++.+...+.........++++++.++..+..
T Consensus       225 ~~g~~~rd~i~v~D~~~~~~~~~~~~~~~~~~~i~Ni~~~~~~si  269 (338)
T d1udca_         225 EDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSV  269 (338)
T ss_dssp             TTSSCEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSSCEEH
T ss_pred             CCCCceeeEEEEeehhhhccccccccccccCcceeeecCCCCCcH
Confidence                01336788999988776554333444678899988876643

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.82  E-value=4.8e-22  Score=158.19  Aligned_cols=152  Identities=14%  Similarity=0.194  Sum_probs=111.9

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhC--CceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLG--QDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      ..+|+||++|||||++|||+++++.|+++|++|++++|+.++.+++.+++.  ..+.+..+|+++.+++++++       
T Consensus        18 ~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-------   90 (191)
T d1luaa1          18 GGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAV-------   90 (191)
T ss_dssp             TSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHT-------
T ss_pred             CCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHh-------
Confidence            468999999999999999999999999999999999999998887777663  34567889999999887654       


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCC-CCceEEEEecccccccCCCCchhhhh
Q 024145           88 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQ-QKGCILFTASACTEIAGLGSPAYTIS  166 (272)
Q Consensus        88 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~iss~~~~~~~~~~~~Y~~s  166 (272)
                      +++|+||||+|..      +...+.++|+..+++|+.+.++....+.+.+... ..++++..++..+..+ .+...|+.+
T Consensus        91 ~~iDilin~Ag~g------~~~~~~e~~~~~~~~nv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~g~~~y~~s  163 (191)
T d1luaa1          91 KGAHFVFTAGAIG------LELLPQAAWQNESSIEIVADYNAQPPLGIGGIDATDKGKEYGGKRAFGALG-IGGLKLKLH  163 (191)
T ss_dssp             TTCSEEEECCCTT------CCCBCHHHHHTCTTCCEEEECCCSSSCSBTTCCTTCEEEEETTEEEECHHH-HHHHHHHHH
T ss_pred             cCcCeeeecCccc------cccCCHHHHHhhhcceeehhHhhHHHHHHHhhhhccCcEEecceEEEeccC-cCcHHHHHH
Confidence            4799999999863      3456889999999999887776554433333222 1223222222112111 123469999


Q ss_pred             HHHHHHHHH
Q 024145          167 KYGILGLVK  175 (272)
Q Consensus       167 K~a~~~~~~  175 (272)
                      |+++..+++
T Consensus       164 k~a~~~l~~  172 (191)
T d1luaa1         164 RACIAKLFE  172 (191)
T ss_dssp             HHHHHHHTS
T ss_pred             HHHHHHHHh
Confidence            999987764

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.82  E-value=4.2e-19  Score=153.22  Aligned_cols=221  Identities=14%  Similarity=0.057  Sum_probs=152.9

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh-----CCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL-----GQDVCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      .||+||||||+|.||++++++|+++|++|+++.|+......+.+..     ......+..|+++.+++..++.       
T Consensus        10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   82 (342)
T d1y1pa1          10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK-------   82 (342)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT-------
T ss_pred             CcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcc-------
Confidence            5899999999999999999999999999999999876655443211     2345567789999988766554       


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCC----------
Q 024145           89 KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGL----------  158 (272)
Q Consensus        89 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~----------  158 (272)
                      .+|+++|+++....      ..+   ....+..|+.++.++++.+...   ..-.++|++||..+.....          
T Consensus        83 ~~~~v~~~a~~~~~------~~~---~~~~~~~nv~gt~~ll~~~~~~---~~v~~~i~~SS~~~~~~~~~~~~~~~~~e  150 (342)
T d1y1pa1          83 GAAGVAHIASVVSF------SNK---YDEVVTPAIGGTLNALRAAAAT---PSVKRFVLTSSTVSALIPKPNVEGIYLDE  150 (342)
T ss_dssp             TCSEEEECCCCCSC------CSC---HHHHHHHHHHHHHHHHHHHHTC---TTCCEEEEECCGGGTCCCCTTCCCCEECT
T ss_pred             cchhhhhhcccccc------ccc---ccccccchhhhHHHHHHhhhcc---cccccccccccceeeccCCCCCCCccccc
Confidence            68999999986432      122   3456788999999998877652   1346799999975432111          


Q ss_pred             ---------------------CCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCC---hhHHHHH
Q 024145          159 ---------------------GSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVD---PALIESS  214 (272)
Q Consensus       159 ---------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~---~~~~~~~  214 (272)
                                           ....|+.||.+.|.+++.+++.+. .++++..++|+.+..|........   .......
T Consensus       151 ~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l  229 (342)
T d1y1pa1         151 KSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENK-PHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSL  229 (342)
T ss_dssp             TCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHC-CSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHH
T ss_pred             cccccccccccccccccCCCCCcCcccchhHhHHHHHHHhhhhcc-cccccceecccceeCCCCCccccccchHHHHHHH
Confidence                                 112599999999999999998875 468889999998887754321111   1122222


Q ss_pred             Hhhc------CCCCCCCCChHhHHHHHHHHhcCCCCCccccEEEecCc
Q 024145          215 MSQM------GNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGG  256 (272)
Q Consensus       215 ~~~~------~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG  256 (272)
                      .+..      ......+..++|+|++++.++....  ..|+.+...++
T Consensus       230 ~~g~~~~~~~~~~~~~~v~v~Dva~~~i~~l~~~~--~~g~~~~~~~~  275 (342)
T d1y1pa1         230 FNGEVSPALALMPPQYYVSAVDIGLLHLGCLVLPQ--IERRRVYGTAG  275 (342)
T ss_dssp             HTTCCCHHHHTCCSEEEEEHHHHHHHHHHHHHCTT--CCSCEEEECCE
T ss_pred             HcCCcCcccCCccceeeeeHHHHHHHHHHhhcCcc--ccceEEEEcCC
Confidence            2211      1111346789999999887775432  36777655544

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=5e-19  Score=152.61  Aligned_cols=212  Identities=12%  Similarity=0.045  Sum_probs=149.0

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcch-----HH----HHHHHhCCceEEEEecCCCHHHHHHHHHHHHHH
Q 024145           16 KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKL-----GE----DLADKLGQDVCYIHCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~-----~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (272)
                      |++|||||+|+||++++++|+++|++|+.++|....     .+    ........++.++.+|++|.+.+..++...   
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   78 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV---   78 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH---
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhc---
Confidence            445999999999999999999999999999986431     11    122223457899999999999998888765   


Q ss_pred             hCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccc-----------
Q 024145           87 FGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEI-----------  155 (272)
Q Consensus        87 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~-----------  155 (272)
                        .+++++|.++....      ..+.+.....+++|+.++.++++++..+... +..++|++||.....           
T Consensus        79 --~~~~v~~~~a~~~~------~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~-~~~~~i~~SS~~vyg~~~~~~~~E~~  149 (347)
T d1t2aa_          79 --KPTEIYNLGAQSHV------KISFDLAEYTADVDGVGTLRLLDAVKTCGLI-NSVKFYQASTSELYGKVQEIPQKETT  149 (347)
T ss_dssp             --CCSEEEECCSCCCH------HHHHHSHHHHHHHHTHHHHHHHHHHHHTTCT-TTCEEEEEEEGGGTCSCSSSSBCTTS
T ss_pred             --ccceeeeeeecccc------chhhccchhhhhhHHHHHHHHHHHHHHcCCC-CCcEEEEecchheecCCCCCCCCCCC
Confidence              78899999886432      2234556677899999999999988776443 345799999865321           


Q ss_pred             cCCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHH---HHHhhcCC--------CCCC
Q 024145          156 AGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIE---SSMSQMGN--------LKGE  224 (272)
Q Consensus       156 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~---~~~~~~~~--------~~~~  224 (272)
                      +..+...|+.||.+.|.+++.+++.   .++.+..++|+.+.+|.............   .......+        ..+.
T Consensus       150 ~~~P~~~Yg~sK~~aE~~~~~~~~~---~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~  226 (347)
T d1t2aa_         150 PFYPRSPYGAAKLYAYWIVVNFREA---YNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRD  226 (347)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHH---HCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEEC
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHH---hCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceee
Confidence            1123457999999999999999887   47889999999888875432111111111   11111111        1235


Q ss_pred             CCChHhHHHHHHHHhcCC
Q 024145          225 FLKTDGIANAALYLASDE  242 (272)
Q Consensus       225 ~~~~~dva~~~~~l~s~~  242 (272)
                      +...+|++.++..++...
T Consensus       227 ~i~v~D~~~a~~~~~~~~  244 (347)
T d1t2aa_         227 WGHAKDYVEAMWLMLQND  244 (347)
T ss_dssp             CEEHHHHHHHHHHHHHSS
T ss_pred             eeEecHHHHHHHHHhhcC
Confidence            788999999999888654

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.80  E-value=2.3e-18  Score=147.88  Aligned_cols=215  Identities=13%  Similarity=0.033  Sum_probs=149.5

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcc-----hHHHH---HHHh-CCceEEEEecCCCHHHHHHHHHHHHH
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGAKVVIADVQDK-----LGEDL---ADKL-GQDVCYIHCDISNEDEVINLVDTAVS   85 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~-----~~~~~---~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (272)
                      .|++|||||||.||+++++.|+++|++|+.++|...     ....+   .... ...+.++.+|+++.+++++.++..  
T Consensus         1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~--   78 (339)
T d1n7ha_           1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI--   78 (339)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH--
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhh--
Confidence            389999999999999999999999999999998532     11111   1111 346889999999999998887754  


Q ss_pred             HhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCC-CCceEEEEecccccc---------
Q 024145           86 KFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQ-QKGCILFTASACTEI---------  155 (272)
Q Consensus        86 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~iss~~~~~---------  155 (272)
                         ++|++||+|+....      ..+.+.....++.|+.+...++.++.....+. ...++++.||.....         
T Consensus        79 ---~~D~Vih~Aa~~~~------~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~~~~E~  149 (339)
T d1n7ha_          79 ---KPDEVYNLAAQSHV------AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSET  149 (339)
T ss_dssp             ---CCSEEEECCSCCCH------HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTT
T ss_pred             ---ccchhhhccccccc------cccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCCCCCCCC
Confidence               79999999987543      12345667889999999999988877654432 234455555543221         


Q ss_pred             -cCCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHH---HHHHhhcCC--------CCC
Q 024145          156 -AGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALI---ESSMSQMGN--------LKG  223 (272)
Q Consensus       156 -~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~---~~~~~~~~~--------~~~  223 (272)
                       +......|+.+|.+.|.+++.+.+.   +|+.+..++|+.+.+|............   ........+        ..+
T Consensus       150 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r  226 (339)
T d1n7ha_         150 TPFHPRSPYAASKCAAHWYTVNYREA---YGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASR  226 (339)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHH---HCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEE
T ss_pred             CCCCCcchhhHHHHHHHHHHHHHHHH---hCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCccc
Confidence             1224568999999999999999887   4799999999999988644211111111   111111111        113


Q ss_pred             CCCChHhHHHHHHHHhcCCC
Q 024145          224 EFLKTDGIANAALYLASDES  243 (272)
Q Consensus       224 ~~~~~~dva~~~~~l~s~~~  243 (272)
                      .++..+|++.++..++....
T Consensus       227 d~~~v~D~a~~~~~~~~~~~  246 (339)
T d1n7ha_         227 DWGFAGDYVEAMWLMLQQEK  246 (339)
T ss_dssp             ECEEHHHHHHHHHHHHTSSS
T ss_pred             cceeeehHHHHHHHHHhcCC
Confidence            47889999999998886543

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.80  E-value=8.8e-19  Score=149.48  Aligned_cols=228  Identities=13%  Similarity=0.045  Sum_probs=158.0

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchH-HHHHHHh--CCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Q 024145           16 KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLG-EDLADKL--GQDVCYIHCDISNEDEVINLVDTAVSKFGKLDI   92 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~-~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   92 (272)
                      |+||||||+|+||++++++|+++|++|+.++|..... ....+.+  ..++.++.+|++|.+++++.+...     ..++
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~~~   75 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKA-----QPQE   75 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHH-----CCSE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHhhhhhccc-----cccc
Confidence            7899999999999999999999999999999865431 1223333  347899999999999998877765     6788


Q ss_pred             EEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccc-----------cCCCCc
Q 024145           93 MYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEI-----------AGLGSP  161 (272)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~-----------~~~~~~  161 (272)
                      ++|+++....      ....+.....++.|+.++.++++++...-.+   .++++.||..-..           +.....
T Consensus        76 ~~~~a~~~~~------~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~---~~~i~~Ss~~~~~~~~~~~~~E~~~~~p~~  146 (321)
T d1rpna_          76 VYNLAAQSFV------GASWNQPVTTGVVDGLGVTHLLEAIRQFSPE---TRFYQASTSEMFGLIQAERQDENTPFYPRS  146 (321)
T ss_dssp             EEECCSCCCH------HHHTTSHHHHHHHHTHHHHHHHHHHHHHCTT---SEEEEEEEGGGGCSCSSSSBCTTSCCCCCS
T ss_pred             cccccccccc------cccccchHHHHhhhhhchHHHHHHHHHhCCC---cccccccchhhcCcccCCCCCCCCCccccC
Confidence            8888876433      1122345678899999999999988764432   3466665543211           122446


Q ss_pred             hhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCC---hhHHHHHHhhcCC--------CCCCCCChHh
Q 024145          162 AYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVD---PALIESSMSQMGN--------LKGEFLKTDG  230 (272)
Q Consensus       162 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~---~~~~~~~~~~~~~--------~~~~~~~~~d  230 (272)
                      .|+.+|.+.+.+++.+..+   +++.+..+.|+.+..|........   .....+......+        ..+.++..+|
T Consensus       147 ~Y~~sK~~~E~~~~~~~~~---~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D  223 (321)
T d1rpna_         147 PYGVAKLYGHWITVNYRES---FGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGD  223 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHHH---HCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHH
T ss_pred             hhHHHHHHHHHHHHHHHhh---cCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHH
Confidence            8999999999999999888   478899999998888764321111   0111111111111        1134788999


Q ss_pred             HHHHHHHHhcCCCCCccccEEEecCceeeccCcc
Q 024145          231 IANAALYLASDESSYVSGQNLVVDGGFSVVNPTV  264 (272)
Q Consensus       231 va~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~~  264 (272)
                      +++++..++....    +..+++.+|........
T Consensus       224 ~~~~~~~~~~~~~----~~~~ni~~~~~~s~~~~  253 (321)
T d1rpna_         224 YVEAMWLMLQQDK----ADDYVVATGVTTTVRDM  253 (321)
T ss_dssp             HHHHHHHHHHSSS----CCCEEECCSCEEEHHHH
T ss_pred             HHHHHHHHHhcCC----cCCceecccccceehhh
Confidence            9999999886542    45577877776654433

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.80  E-value=3.9e-18  Score=146.87  Aligned_cols=226  Identities=18%  Similarity=0.103  Sum_probs=160.5

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcch----HHHHHHHh----CCceEEEEecCCCHHHHHHHHHHHHH
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKL----GEDLADKL----GQDVCYIHCDISNEDEVINLVDTAVS   85 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~----~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (272)
                      +-|++|||||||.||++++++|.++|++|++++|....    ........    ...+.++.+|+.|.........    
T Consensus        15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~----   90 (341)
T d1sb8a_          15 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA----   90 (341)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT----
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccccc----
Confidence            55899999999999999999999999999999863321    11121111    2468999999999887654333    


Q ss_pred             HhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccccccc---------
Q 024145           86 KFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIA---------  156 (272)
Q Consensus        86 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~---------  156 (272)
                         ..+.++|.++....      ..+.++....+++|+.++..+++++...    +..++|++||......         
T Consensus        91 ---~~~~v~~~~a~~~~------~~~~~~~~~~~~~Nv~gt~~ll~~~~~~----~~~~~i~~SS~~vyg~~~~~~~~E~  157 (341)
T d1sb8a_          91 ---GVDYVLHQAALGSV------PRSINDPITSNATNIDGFLNMLIAARDA----KVQSFTYAASSSTYGDHPGLPKVED  157 (341)
T ss_dssp             ---TCSEEEECCSCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHHT----TCSEEEEEEEGGGGTTCCCSSBCTT
T ss_pred             ---cccccccccccccc------cccccCccchhheeehhHHHHHHHHHhc----CCceEEEcccceeeCCCCCCCccCC
Confidence               67888988875432      1245677889999999999999988763    3457999999865432         


Q ss_pred             --CCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCCh----hHHHHHHhhcC-------CCCC
Q 024145          157 --GLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDP----ALIESSMSQMG-------NLKG  223 (272)
Q Consensus       157 --~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~----~~~~~~~~~~~-------~~~~  223 (272)
                        ......|+.||.+.|.+++.+++.+   ++++..++|+.+.++.........    ......+....       ...+
T Consensus       158 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r  234 (341)
T d1sb8a_         158 TIGKPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSR  234 (341)
T ss_dssp             CCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEE
T ss_pred             CCCCCCCcchHHHHHHHHHHHHHHHHh---CCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEE
Confidence              2234689999999999999999874   688999999988887654322211    12222322211       1124


Q ss_pred             CCCChHhHHHHHHHHhcCCCCCccccEEEecCceeec
Q 024145          224 EFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       224 ~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~  260 (272)
                      .++..+|++.++..++.... ...|+.+++..+....
T Consensus       235 ~~i~v~D~~~a~~~~~~~~~-~~~~~~~~~~~~~~~s  270 (341)
T d1sb8a_         235 DFCYIENTVQANLLAATAGL-DARNQVYNIAVGGRTS  270 (341)
T ss_dssp             CCEEHHHHHHHHHHHHTCCG-GGCSEEEEESCSCCEE
T ss_pred             EEEEEeccchhhhhhhhccc-cccceeeeecccccch
Confidence            57888999999888775443 2467888887766554

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.79  E-value=1.1e-18  Score=150.60  Aligned_cols=221  Identities=18%  Similarity=0.154  Sum_probs=151.2

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCc---c-hHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGAKVVIADVQD---K-LGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~---~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      -|+||||||||.||++++++|+++|+.|.++.++.   . .........+.++.++.+|+.|.+.+..++.       ..
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~-------~~   74 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAA-------KA   74 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHT-------TC
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHHHHHHh-------hh
Confidence            37899999999999999999999998755544321   1 1111112234689999999999999887654       67


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccccccc--------------
Q 024145           91 DIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIA--------------  156 (272)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~--------------  156 (272)
                      |.++|.|+....      ....++..+.+++|+.++.+++..+...-     .++|++||......              
T Consensus        75 ~~v~~~a~~~~~------~~~~~~~~~~~~~N~~g~~nll~~~~~~~-----~k~i~~ss~~vyg~~~~~~~~~~~~~~~  143 (346)
T d1oc2a_          75 DAIVHYAAESHN------DNSLNDPSPFIHTNFIGTYTLLEAARKYD-----IRFHHVSTDEVYGDLPLREDLPGHGEGP  143 (346)
T ss_dssp             SEEEECCSCCCH------HHHHHCCHHHHHHHTHHHHHHHHHHHHHT-----CEEEEEEEGGGGCCBCCGGGSTTTTCST
T ss_pred             hhhhhhhhcccc------cchhhCcccceeeehHhHHhhhhhhcccc-----ccccccccceEecccCccccccccccCc
Confidence            889999986543      11234456788999999999998776533     35777777653311              


Q ss_pred             ---------CCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcC-------C
Q 024145          157 ---------GLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMG-------N  220 (272)
Q Consensus       157 ---------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~-------~  220 (272)
                               ......|+.+|.+.|.+++.+.++   .|+++.+++|+.+.+|...........+........       .
T Consensus       144 ~~~~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~---~~i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~i~~~g~  220 (346)
T d1oc2a_         144 GEKFTAETNYNPSSPYSSTKAASDLIVKAWVRS---FGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGK  220 (346)
T ss_dssp             TSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHH---HCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSC
T ss_pred             ccccccCCCCCCCCHHHHHHHHHHHHHHHHHHH---cCCCEEEEeecceeCCCCCccchhHHHHHHHHcCCceeEeCCCC
Confidence                     112356999999999999999887   489999999999998764422111222222222211       1


Q ss_pred             CCCCCCChHhHHHHHHHHhcCCCCCccccEEEecCceee
Q 024145          221 LKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSV  259 (272)
Q Consensus       221 ~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~  259 (272)
                      ..+.++..+|++++++.++....   .|..+++.+|...
T Consensus       221 ~~r~~i~v~D~a~a~~~~~~~~~---~~~~~~~~~~~~~  256 (346)
T d1oc2a_         221 NVRDWIHTNDHSTGVWAILTKGR---MGETYLIGADGEK  256 (346)
T ss_dssp             CEEECEEHHHHHHHHHHHHHHCC---TTCEEEECCSCEE
T ss_pred             ccccccchhhHHHHHHHHHhhcc---cCccccccccccc
Confidence            12457889999999988776543   3556666555544

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=5e-18  Score=146.41  Aligned_cols=230  Identities=15%  Similarity=0.119  Sum_probs=159.0

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCeEEEeecC------c----chHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHH
Q 024145           16 KVAIITGGASGIGAMAVELFHENGAKVVIADVQ------D----KLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVS   85 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~~V~~~~r~------~----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (272)
                      |+||||||+|.||++++++|+++|++|+.++|.      .    ............++.++++|++|.+++++++...  
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~--   80 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY--   80 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC--
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeecccccccccccccc--
Confidence            688999999999999999999999999988641      1    1222223334678999999999999988776642  


Q ss_pred             HhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccccccc---------
Q 024145           86 KFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIA---------  156 (272)
Q Consensus        86 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~---------  156 (272)
                         .+|+++|.|+....      ..+.++..+.+++|+.++..+++++...    +-.+++++||......         
T Consensus        81 ---~~~~i~h~Aa~~~~------~~~~~~p~~~~~~Nv~gt~~l~~~~~~~----~v~~~i~~ss~~~~~~~~~~~~~~~  147 (346)
T d1ek6a_          81 ---SFMAVIHFAGLKAV------GESVQKPLDYYRVNLTGTIQLLEIMKAH----GVKNLVFSSSATVYGNPQYLPLDEA  147 (346)
T ss_dssp             ---CEEEEEECCSCCCH------HHHHHCHHHHHHHHHHHHHHHHHHHHHT----TCCEEEEEEEGGGGCSCSSSSBCTT
T ss_pred             ---ccccccccccccCc------HhhHhCHHHHHHhhhcccccccchhhhc----Ccccccccccceeeecccccccccc
Confidence               68899999997543      1233456788999999999998887653    3346888888754321         


Q ss_pred             ---CCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCC------CCCh---hHHHHHHhh-c-----
Q 024145          157 ---GLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKG------GVDP---ALIESSMSQ-M-----  218 (272)
Q Consensus       157 ---~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~------~~~~---~~~~~~~~~-~-----  218 (272)
                         .....+|+.+|.+.+..++.++..  ..++....+.|+.+.++.....      ....   ......... .     
T Consensus       148 ~~~~~~~~~Y~~~k~~~e~~~~~~~~~--~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i  225 (346)
T d1ek6a_         148 HPTGGCTNPYGKSKFFIEEMIRDLCQA--DKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNV  225 (346)
T ss_dssp             SCCCCCSSHHHHHHHHHHHHHHHHHHH--CTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEE
T ss_pred             ccccccCChHHHHHHHHHHHHHHHHHh--ccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEE
Confidence               123347999999999998887764  3578889999988877642210      0111   111111111 0     


Q ss_pred             ---------CCCCCCCCChHhHHHHHHHHhcCCCCCccccEEEecCceeeccC
Q 024145          219 ---------GNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVVNP  262 (272)
Q Consensus       219 ---------~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~  262 (272)
                               ....+.++.++|+|.++..+.........++++++.+|.....-
T Consensus       226 ~g~~~~~~~g~~~Rdfi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~~~~s~~  278 (346)
T d1ek6a_         226 FGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVL  278 (346)
T ss_dssp             ECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHH
T ss_pred             cCCcccCCCCCeeEeEEEEEeccchhhhhccccccccCceEEEeCCCCcccHH
Confidence                     00113578999999998877654444457889999998776533

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.78  E-value=2.9e-18  Score=147.63  Aligned_cols=218  Identities=14%  Similarity=0.106  Sum_probs=153.0

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcC-CeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEe
Q 024145           17 VAIITGGASGIGAMAVELFHENG-AKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYN   95 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~   95 (272)
                      ++|||||+|.||++++++|+++| ++|+.+++.......+.+  ..++.++++|+++.+++.+.+.   +   ++|++||
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~--~~~~~~i~~Di~~~~~~~~~~~---~---~~d~Vih   73 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLN--HPHFHFVEGDISIHSEWIEYHV---K---KCDVVLP   73 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTT--CTTEEEEECCTTTCSHHHHHHH---H---HCSEEEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhcc--CCCeEEEECccCChHHHHHHHH---h---CCCcccc
Confidence            58999999999999999999999 579888876554333322  3579999999998776544222   1   5899999


Q ss_pred             CCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCC-----------------
Q 024145           96 NAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGL-----------------  158 (272)
Q Consensus        96 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~-----------------  158 (272)
                      +|+.....      ...+.....+++|+.++..+++.+...     .-+++++||........                 
T Consensus        74 ~a~~~~~~------~~~~~~~~~~~~nv~gt~~ll~~~~~~-----~~~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~  142 (342)
T d2blla1          74 LVAIATPI------EYTRNPLRVFELDFEENLRIIRYCVKY-----RKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVN  142 (342)
T ss_dssp             CBCCCCHH------HHHHSHHHHHHHHTHHHHHHHHHHHHT-----TCEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTT
T ss_pred             cccccccc------ccccCCccccccccccccccccccccc-----cccccccccccccccccccccccccccccccccC
Confidence            99975431      123445678999999999999987652     33567777655433211                 


Q ss_pred             -CCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCC--------hhHHHHHHhhc-------CCCC
Q 024145          159 -GSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVD--------PALIESSMSQM-------GNLK  222 (272)
Q Consensus       159 -~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~--------~~~~~~~~~~~-------~~~~  222 (272)
                       ....|+.||.+.|.+++.+++.+   |+.+..++|..+..+........        .......+...       +...
T Consensus       143 ~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~  219 (342)
T d2blla1         143 KPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQK  219 (342)
T ss_dssp             CGGGHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCE
T ss_pred             CCcchhhhcccchhhhhhhhhccc---CceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCee
Confidence             12469999999999999999884   78999999988888754432110        11222222221       1112


Q ss_pred             CCCCChHhHHHHHHHHhcCCCCCccccEEEecCc
Q 024145          223 GEFLKTDGIANAALYLASDESSYVSGQNLVVDGG  256 (272)
Q Consensus       223 ~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG  256 (272)
                      +.++..+|+++++..++........|+.+++..|
T Consensus       220 r~~i~v~D~~~a~~~~~~~~~~~~~g~~~Nig~~  253 (342)
T d2blla1         220 RCFTDIRDGIEALYRIIENAGNRCDGEIINIGNP  253 (342)
T ss_dssp             EECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCT
T ss_pred             eeecccccccceeeeehhhccccCCCeEEEEecc
Confidence            4478999999999999876544456899999644

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.78  E-value=1.1e-18  Score=149.25  Aligned_cols=224  Identities=16%  Similarity=0.144  Sum_probs=157.4

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCeEEEe------ecC--cchHHHHHH-HhCCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           17 VAIITGGASGIGAMAVELFHENGAKVVIA------DVQ--DKLGEDLAD-KLGQDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~~V~~~------~r~--~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      ++|||||+|.||++++++|+++|+.|..+      ++.  ......+.. ....++.++..|.++.........      
T Consensus         2 kIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~------   75 (322)
T d1r6da_           2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELR------   75 (322)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTT------
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhhhcCCCeEEEEeccccchhhhcccc------
Confidence            58999999999999999999999865433      221  111111111 123579999999999987664333      


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccC----------
Q 024145           88 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAG----------  157 (272)
Q Consensus        88 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~----------  157 (272)
                       .+|.++|.|+....      ....+...+.+++|+.++..+++++...    +..++|++||.......          
T Consensus        76 -~~d~vi~~a~~~~~------~~~~~~~~~~~~~N~~gt~~ll~~~~~~----~~~~~I~~Ss~~~yg~~~~~~~~E~~~  144 (322)
T d1r6da_          76 -GVDAIVHFAAESHV------DRSIAGASVFTETNVQGTQTLLQCAVDA----GVGRVVHVSTNQVYGSIDSGSWTESSP  144 (322)
T ss_dssp             -TCCEEEECCSCCCH------HHHHHCCHHHHHHHTHHHHHHHHHHHHT----TCCEEEEEEEGGGGCCCSSSCBCTTSC
T ss_pred             -ccceEEeecccccc------cccccchHHHhhhhHHHHHHHHHHHHHc----CCceEEEeecceeecCCCCCCCCCCCC
Confidence             78999999986433      2234556677899999999999988753    34579999998654322          


Q ss_pred             -CCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcC-------CCCCCCCChH
Q 024145          158 -LGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMG-------NLKGEFLKTD  229 (272)
Q Consensus       158 -~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~  229 (272)
                       .....|+.||.+.+.+++.+++++   |+.+..++|+.+.+|........+..+........       ...+.++..+
T Consensus       145 ~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~  221 (322)
T d1r6da_         145 LEPNSPYAASKAGSDLVARAYHRTY---GLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTD  221 (322)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEeeeEECcCCCcCcHHHHHHHHHHcCCCcEEecCCCeEEccEEHH
Confidence             234589999999999999999884   79999999999998864421111222233322211       1123578899


Q ss_pred             hHHHHHHHHhcCCCCCccccEEEecCceeeccCc
Q 024145          230 GIANAALYLASDESSYVSGQNLVVDGGFSVVNPT  263 (272)
Q Consensus       230 dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~  263 (272)
                      |+|+++..++....   .|+.+++..|.......
T Consensus       222 D~a~ai~~~~~~~~---~~~~~ni~~~~~~s~~e  252 (322)
T d1r6da_         222 DHCRGIALVLAGGR---AGEIYHIGGGLELTNRE  252 (322)
T ss_dssp             HHHHHHHHHHHHCC---TTCEEEECCCCEEEHHH
T ss_pred             HHHHHHHHHHhCCC---CCCeeEEeecccchhHH
Confidence            99999999886654   58899998887775433

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.78  E-value=5.5e-18  Score=147.06  Aligned_cols=223  Identities=14%  Similarity=0.109  Sum_probs=158.0

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      ++.+||||||+|+||++++++|.++|++|+++++......  .... ....+..+|+.+.+++.++++       .+|.+
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~--~~~~-~~~~~~~~D~~~~~~~~~~~~-------~~d~V   83 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHM--TEDM-FCDEFHLVDLRVMENCLKVTE-------GVDHV   83 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSS--CGGG-TCSEEEECCTTSHHHHHHHHT-------TCSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccch--hhhc-ccCcEEEeechhHHHHHHHhh-------cCCeE
Confidence            6778999999999999999999999999999876544211  1111 345778889999888766544       78999


Q ss_pred             EeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccccccc-----------------
Q 024145           94 YNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIA-----------------  156 (272)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~-----------------  156 (272)
                      ||.|+....     .....+.....+..|+.++..+++++...-    -.++|++||......                 
T Consensus        84 ih~a~~~~~-----~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~----vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~  154 (363)
T d2c5aa1          84 FNLAADMGG-----MGFIQSNHSVIMYNNTMISFNMIEAARING----IKRFFYASSACIYPEFKQLETTNVSLKESDAW  154 (363)
T ss_dssp             EECCCCCCC-----HHHHTTCHHHHHHHHHHHHHHHHHHHHHTT----CSEEEEEEEGGGSCGGGSSSSSSCEECGGGGS
T ss_pred             eeccccccc-----ccccccccccccccccchhhHHHHhHHhhC----ccccccccccccccccccccccccccccccCC
Confidence            999986543     111234466778899999999999887643    346999999765331                 


Q ss_pred             -CCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHH----HhhcC--------CCCC
Q 024145          157 -GLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESS----MSQMG--------NLKG  223 (272)
Q Consensus       157 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~----~~~~~--------~~~~  223 (272)
                       ......|+.||.+.+.+++.+..++   |+.+..++|+.+.++...............    .....        ...+
T Consensus       155 ~~~p~~~Yg~sK~~~E~~~~~~~~~~---gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~r  231 (363)
T d2c5aa1         155 PAEPQDAFGLEKLATEELCKHYNKDF---GIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTR  231 (363)
T ss_dssp             SBCCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEE
T ss_pred             cCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCeEE
Confidence             1234579999999999999998884   799999999999987543221111111111    11111        1124


Q ss_pred             CCCChHhHHHHHHHHhcCCCCCccccEEEecCceeeccC
Q 024145          224 EFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVVNP  262 (272)
Q Consensus       224 ~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~  262 (272)
                      .+...+|++.++++++...    .|+.+++.+|..++.-
T Consensus       232 d~i~v~D~~~~~~~~~~~~----~~~~~ni~~~~~~s~~  266 (363)
T d2c5aa1         232 SFTFIDECVEGVLRLTKSD----FREPVNIGSDEMVSMN  266 (363)
T ss_dssp             CCEEHHHHHHHHHHHHHSS----CCSCEEECCCCCEEHH
T ss_pred             EEeehhHHHHHHHHHHhCC----CCCeEEEecCCcccHH
Confidence            5788999999999888543    4678899888776543

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=4.5e-18  Score=144.94  Aligned_cols=217  Identities=14%  Similarity=0.112  Sum_probs=148.6

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcc-hHHHHHHHh-CCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGAKVVIADVQDK-LGEDLADKL-GQDVCYIHCDISNEDEVINLVDTAVSKFGKLDI   92 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~-~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   92 (272)
                      .|++|||||+|.||++++++|+++|++|++++|... ..+.+.... ..++.....|+.+.            .+.++|+
T Consensus         1 kKKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~------------~~~~~d~   68 (312)
T d2b69a1           1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP------------LYIEVDQ   68 (312)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSC------------CCCCCSE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHhcCCCceEEEehHHHHH------------HHcCCCE
Confidence            378999999999999999999999999999876332 221111111 23455666665432            1236999


Q ss_pred             EEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccccccc----------------
Q 024145           93 MYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIA----------------  156 (272)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~----------------  156 (272)
                      |||+|+.....      .+.++..+.+++|+.++..+++++...    + -++|++||.+....                
T Consensus        69 VihlAa~~~~~------~~~~~~~~~~~~Nv~g~~~ll~~~~~~----~-~k~I~~SS~~vy~~~~~~~~~e~~~~~~~~  137 (312)
T d2b69a1          69 IYHLASPASPP------NYMYNPIKTLKTNTIGTLNMLGLAKRV----G-ARLLLASTSEVYGDPEVHPQSEDYWGHVNP  137 (312)
T ss_dssp             EEECCSCCSHH------HHTTCHHHHHHHHHHHHHHHHHHHHHH----T-CEEEEEEEGGGGBSCSSSSBCTTCCCBCCS
T ss_pred             EEECcccCCch------hHHhCHHHHHHHHHHHHHHHHHHHHHc----C-CcEEEEEChheecCCCCCCCCccccCCCCC
Confidence            99999865431      112345678899999999999987653    2 36999998654321                


Q ss_pred             CCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCC--hhHHHHHHhhcC-------CCCCCCCC
Q 024145          157 GLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVD--PALIESSMSQMG-------NLKGEFLK  227 (272)
Q Consensus       157 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~-------~~~~~~~~  227 (272)
                      ......|+.||.+.+.+++.++..+   |+.+..++|+.+.+|........  +..+........       ...+.++.
T Consensus       138 ~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~  214 (312)
T d2b69a1         138 IGPRACYDEGKRVAETMCYAYMKQE---GVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQY  214 (312)
T ss_dssp             SSTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEE
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHHh---CCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccEE
Confidence            1234579999999999999999884   79999999999999875432111  122233322211       11235778


Q ss_pred             hHhHHHHHHHHhcCCCCCccccEEEecCceeecc
Q 024145          228 TDGIANAALYLASDESSYVSGQNLVVDGGFSVVN  261 (272)
Q Consensus       228 ~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~  261 (272)
                      .+|++++++.++...    .+..+++.+|.....
T Consensus       215 v~D~~~~~~~~~~~~----~~~~~n~~~~~~~~~  244 (312)
T d2b69a1         215 VSDLVNGLVALMNSN----VSSPVNLGNPEEHTI  244 (312)
T ss_dssp             HHHHHHHHHHHHTSS----CCSCEEESCCCEEEH
T ss_pred             HHHHHHHHHHHHhhc----cCCceEecCCcccch
Confidence            999999998887543    355688888877653

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.77  E-value=9.7e-18  Score=144.74  Aligned_cols=168  Identities=19%  Similarity=0.203  Sum_probs=127.7

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcch----HHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Q 024145           16 KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKL----GEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~----~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   91 (272)
                      |+||||||+|+||++++++|+++|++|+++++....    ..........++.++.+|++|.+++++++...     ++|
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~-----~~d   76 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEY-----KID   76 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHS-----CCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhcc-----CCC
Confidence            799999999999999999999999999998753221    12222333567999999999999998877643     799


Q ss_pred             EEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccc---------------c
Q 024145           92 IMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEI---------------A  156 (272)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~---------------~  156 (272)
                      +|||+|+.....      ...+.....+.+|+.++..+++++...-.    .++|++||.....               +
T Consensus        77 ~VihlAa~~~~~------~~~~~~~~~~~~N~~~t~~ll~~~~~~~i----~~~i~~SS~~vyg~~~~~~~~~~~~e~~~  146 (347)
T d1z45a2          77 SVIHFAGLKAVG------ESTQIPLRYYHNNILGTVVLLELMQQYNV----SKFVFSSSATVYGDATRFPNMIPIPEECP  146 (347)
T ss_dssp             EEEECCSCCCHH------HHHHSHHHHHHHHHHHHHHHHHHHHHHTC----CEEEEEEEGGGGCCGGGSTTCCSBCTTSC
T ss_pred             EEEEcccccccc------ccccCcccccccchhhhHHHHHHHHhccc----ceEEeecceeeecCcccCCCCCccccccC
Confidence            999999975421      12344567888999999999998876433    3699999965432               1


Q ss_pred             CCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCC
Q 024145          157 GLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATG  199 (272)
Q Consensus       157 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~  199 (272)
                      ......|+.||.+.|.+++.+.... ..++.+..++|+.+..+
T Consensus       147 ~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~~~lR~~~v~g~  188 (347)
T d1z45a2         147 LGPTNPYGHTKYAIENILNDLYNSD-KKSWKFAILRYFNPIGA  188 (347)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHS-TTSCEEEEEEECEEECC
T ss_pred             CCCCChhHhHHHHHHHHHHHHHHhh-ccCCcEEEEeecceEee
Confidence            1234579999999999999987653 35788888888777654

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.76  E-value=5.3e-17  Score=140.11  Aligned_cols=214  Identities=14%  Similarity=0.028  Sum_probs=151.9

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh--CCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL--GQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      .+||++|||||+|.||+++++.|+++|++|++++|+......+.+..  ...+.++.+|++|++++.+++...     .+
T Consensus         6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~-----~~   80 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREF-----QP   80 (356)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhc-----hh
Confidence            58999999999999999999999999999999999876554444433  357999999999999988877655     78


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccccccc------------CC
Q 024145           91 DIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIA------------GL  158 (272)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~------------~~  158 (272)
                      |+++|.++....      ..+.+.....+++|+.++..+++++...-   ....+++.|+......            ..
T Consensus        81 ~~v~~~aa~~~~------~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~---~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~  151 (356)
T d1rkxa_          81 EIVFHMAAQPLV------RLSYSEPVETYSTNVMGTVYLLEAIRHVG---GVKAVVNITSDKCYDNKEWIWGYRENEAMG  151 (356)
T ss_dssp             SEEEECCSCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHHHC---CCCEEEEECCGGGBCCCCSSSCBCTTSCBC
T ss_pred             hhhhhhhccccc------cccccCCccccccccccchhhhhhhhccc---cccccccccccccccccccccccccccccC
Confidence            999999986533      22356677899999999999998876633   2234444444433221            12


Q ss_pred             CCchhhhhHHHHHHHHHHHHHHhcC------CCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCC-------CCCCC
Q 024145          159 GSPAYTISKYGILGLVKCLAAELGQ------YGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGN-------LKGEF  225 (272)
Q Consensus       159 ~~~~Y~~sK~a~~~~~~~la~e~~~------~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~-------~~~~~  225 (272)
                      +...|+.+|.+.+.+++.++.++..      .++.+..+.|+.+..|...........+........+       ....+
T Consensus       152 p~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  231 (356)
T d1rkxa_         152 GYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPW  231 (356)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECC
T ss_pred             CCCccccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHHHHHhCCCceEEeeccccccc
Confidence            3457999999999999999887642      4788999999988877532111111222222221111       11346


Q ss_pred             CChHhHHHHHHHHhc
Q 024145          226 LKTDGIANAALYLAS  240 (272)
Q Consensus       226 ~~~~dva~~~~~l~s  240 (272)
                      ...+|++.++..++.
T Consensus       232 ~~v~D~~~a~~~~~~  246 (356)
T d1rkxa_         232 QHVLEPLSGYLLLAQ  246 (356)
T ss_dssp             EETHHHHHHHHHHHH
T ss_pred             cccccccchhhhhhh
Confidence            678999999887764

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.75  E-value=7.1e-17  Score=137.97  Aligned_cols=221  Identities=15%  Similarity=0.152  Sum_probs=146.2

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcc--hHHHHHH-HhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           17 VAIITGGASGIGAMAVELFHENGAKVVIADVQDK--LGEDLAD-KLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~~V~~~~r~~~--~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      +||||||+|+||+++++.|+++|++|+++++-..  ....+.. ....++.++.+|+++.++++++++..     ++|++
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~-----~~d~V   76 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKY-----MPDSC   76 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHH-----CCSEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhc-----CCceE
Confidence            6899999999999999999999999998874222  2221111 11357899999999999998887755     68999


Q ss_pred             EeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccC----------------
Q 024145           94 YNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAG----------------  157 (272)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~----------------  157 (272)
                      ||+|+....      ....++....+++|+.++.++++++...-.    .+.++.||.....+.                
T Consensus        77 ih~aa~~~~------~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~----~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~  146 (338)
T d1orra_          77 FHLAGQVAM------TTSIDNPCMDFEINVGGTLNLLEAVRQYNS----NCNIIYSSTNKVYGDLEQYKYNETETRYTCV  146 (338)
T ss_dssp             EECCCCCCH------HHHHHCHHHHHHHHHHHHHHHHHHHHHHCT----TCEEEEEEEGGGGTTCTTSCEEECSSCEEET
T ss_pred             Eeecccccc------cccccChHHHHHHHHHHHHHHHHhhhcccc----ccccccccccccccccccccccccccccccc
Confidence            999987543      112345678899999999999998776432    335665555433221                


Q ss_pred             ------------CCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCC---ChhHHHHHHhhc----
Q 024145          158 ------------LGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGV---DPALIESSMSQM----  218 (272)
Q Consensus       158 ------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~---~~~~~~~~~~~~----  218 (272)
                                  .....|+.+|...+.+.......+   ++....+.|..+..+.......   ........+...    
T Consensus       147 ~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (338)
T d1orra_         147 DKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF---GLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGIN  223 (338)
T ss_dssp             TCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCC
T ss_pred             ccccCcccCCccccccccccccchhhhhhhhhhhcc---CcccccccccceeeccccccccccccchhhHHHHHHHhccC
Confidence                        133579999999999999998886   4455555554443332211100   111222222111    


Q ss_pred             --------CCCCCCCCChHhHHHHHHHHhcCCCCCccccEEEecCc
Q 024145          219 --------GNLKGEFLKTDGIANAALYLASDESSYVSGQNLVVDGG  256 (272)
Q Consensus       219 --------~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG  256 (272)
                              +...+.+...+|++++++.++... ...+|+.+.+.+|
T Consensus       224 ~~~~~~g~g~~~r~~~~v~D~~~~~~~~l~~~-~~~~~~~~~i~~~  268 (338)
T d1orra_         224 KPFTISGNGKQVRDVLHAEDMISLYFTALANV-SKIRGNAFNIGGT  268 (338)
T ss_dssp             CCEEEESSSCCEEECEEHHHHHHHHHHHHHTH-HHHTTCEEEESSC
T ss_pred             CceEEeCCCceeEeeecccchhhHHHHHHhcc-ccccCcccccccc
Confidence                    011134677899999999887543 2357888888655

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=8.6e-17  Score=128.70  Aligned_cols=199  Identities=13%  Similarity=0.038  Sum_probs=133.2

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDI   92 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   92 (272)
                      |..|+++||||||+||++++++|+++|++|.++.|++++...   .....+.++.+|++|.+++++++.       +.|+
T Consensus         1 m~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~---~~~~~~~~~~gD~~d~~~l~~al~-------~~d~   70 (205)
T d1hdoa_           1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPS---EGPRPAHVVVGDVLQAADVDKTVA-------GQDA   70 (205)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCS---SSCCCSEEEESCTTSHHHHHHHHT-------TCSE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhccc---ccccccccccccccchhhHHHHhc-------CCCE
Confidence            356889999999999999999999999999999998776432   223568999999999999877665       6899


Q ss_pred             EEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCC----chhhhhHH
Q 024145           93 MYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGS----PAYTISKY  168 (272)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~----~~Y~~sK~  168 (272)
                      +|+++|....  ..  ..         +++..++.++++++.    +++-.++|++||..........    ..|...|.
T Consensus        71 vi~~~g~~~~--~~--~~---------~~~~~~~~~l~~aa~----~~~v~r~i~~ss~~~~~~~~~~~~~~~~~~~~~~  133 (205)
T d1hdoa_          71 VIVLLGTRND--LS--PT---------TVMSEGARNIVAAMK----AHGVDKVVACTSAFLLWDPTKVPPRLQAVTDDHI  133 (205)
T ss_dssp             EEECCCCTTC--CS--CC---------CHHHHHHHHHHHHHH----HHTCCEEEEECCGGGTSCTTCSCGGGHHHHHHHH
T ss_pred             EEEEeccCCc--hh--hh---------hhhHHHHHHHHHHHH----hcCCCeEEEEeeeeccCCCccccccccccchHHH
Confidence            9999986432  11  11         123344455555443    3455679999987654432222    24555555


Q ss_pred             HHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCCccc
Q 024145          169 GILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSYVSG  248 (272)
Q Consensus       169 a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  248 (272)
                      +.+.+.       ...|+....|+||.+.........   .    . .........+.+.+|+|+.++.++.++.  ..|
T Consensus       134 ~~e~~l-------~~~~~~~tiirp~~~~~~~~~~~~---~----~-~~~~~~~~~~i~~~DvA~~~~~~l~~~~--~~g  196 (205)
T d1hdoa_         134 RMHKVL-------RESGLKYVAVMPPHIGDQPLTGAY---T----V-TLDGRGPSRVISKHDLGHFMLRCLTTDE--YDG  196 (205)
T ss_dssp             HHHHHH-------HHTCSEEEEECCSEEECCCCCSCC---E----E-ESSSCSSCSEEEHHHHHHHHHHTTSCST--TTT
T ss_pred             HHHHHH-------HhcCCceEEEecceecCCCCcccE---E----E-eeCCCCCCCcCCHHHHHHHHHHHhCCCC--CCC
Confidence            555433       236899999999987543221100   0    0 0011122456789999999999886543  358


Q ss_pred             cEEEecC
Q 024145          249 QNLVVDG  255 (272)
Q Consensus       249 ~~i~~dg  255 (272)
                      +.+.+.+
T Consensus       197 ~~~~~s~  203 (205)
T d1hdoa_         197 HSTYPSH  203 (205)
T ss_dssp             CEEEEEC
T ss_pred             EEEecCC
Confidence            8887764

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.75  E-value=2.9e-17  Score=139.62  Aligned_cols=192  Identities=16%  Similarity=0.186  Sum_probs=138.4

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEE
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMY   94 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv   94 (272)
                      .|+||||||+|.||++++++|+++|+.|+++++..+                 +|+.+.+.++.++..-     .+|.++
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~~-----------------~~~~~~~~~~~~~~~~-----~~d~v~   59 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDE-----------------LNLLDSRAVHDFFASE-----RIDQVY   59 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTT-----------------CCTTCHHHHHHHHHHH-----CCSEEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCchh-----------------ccccCHHHHHHHHhhc-----CCCEEE
Confidence            478999999999999999999999999887765422                 5999999988776532     689999


Q ss_pred             eCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCC----------------
Q 024145           95 NNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGL----------------  158 (272)
Q Consensus        95 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~----------------  158 (272)
                      |+++....     .........+.+++|+.++.++++++..+-    -.++|++||.+...+..                
T Consensus        60 ~~a~~~~~-----~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~----v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~  130 (315)
T d1e6ua_          60 LAAAKVGG-----IVANNTYPADFIYQNMMIESNIIHAAHQND----VNKLLFLGSSCIYPKLAKQPMAESELLQGTLEP  130 (315)
T ss_dssp             ECCCCCCC-----HHHHHHCHHHHHHHHHHHHHHHHHHHHHTT----CCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCG
T ss_pred             Ecchhccc-----cccchhhHHHHHHHHHHHHHHHHHHHHHcC----CCEEEEECCceEcCCCCCCCccCCccccCCCCC
Confidence            99976432     112234556678899999999999887643    34699999987543211                


Q ss_pred             CCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChh---HHHH--HHh---hc--------CCCC
Q 024145          159 GSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPA---LIES--SMS---QM--------GNLK  222 (272)
Q Consensus       159 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~---~~~~--~~~---~~--------~~~~  222 (272)
                      ....|+.||.+.|.+++.+.++.   |+++..++|+.+.+|..........   ....  ...   ..        ....
T Consensus       131 ~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~  207 (315)
T d1e6ua_         131 TNEPYAIAKIAGIKLCESYNRQY---GRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPM  207 (315)
T ss_dssp             GGHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCE
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceE
Confidence            12369999999999999998884   7999999999999886543222111   0100  000   00        1112


Q ss_pred             CCCCChHhHHHHHHHHhc
Q 024145          223 GEFLKTDGIANAALYLAS  240 (272)
Q Consensus       223 ~~~~~~~dva~~~~~l~s  240 (272)
                      +.+...+|++.++..+..
T Consensus       208 ~~~~~v~d~~~~~~~~~~  225 (315)
T d1e6ua_         208 REFLHVDDMAAASIHVME  225 (315)
T ss_dssp             ECEEEHHHHHHHHHHHHH
T ss_pred             EEEEEeehhHHHHHHhhh
Confidence            467788999999888763

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.71  E-value=1e-15  Score=133.57  Aligned_cols=229  Identities=18%  Similarity=0.187  Sum_probs=155.5

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHH-cCCeEEEeec---------CcchHHHHHHHh-----------CCceEEEEecCCCH
Q 024145           15 GKVAIITGGASGIGAMAVELFHE-NGAKVVIADV---------QDKLGEDLADKL-----------GQDVCYIHCDISNE   73 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~-~G~~V~~~~r---------~~~~~~~~~~~~-----------~~~~~~~~~D~~~~   73 (272)
                      +.+||||||+|+||++++++|++ .|++|+++++         ..+..+.....+           ...+.++.+|++|.
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~   81 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence            34799999999999999999986 5899998864         111122222111           23688999999999


Q ss_pred             HHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccc
Q 024145           74 DEVINLVDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACT  153 (272)
Q Consensus        74 ~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~  153 (272)
                      +.+++++..    ..++|+|+|.|+....      ....+.....+++|+.++..+++++...    +..+++++++...
T Consensus        82 ~~l~~~~~~----~~~~d~ViH~Aa~~~~------~~~~~~~~~~~~~N~~~t~~~l~~~~~~----~~~~~~~~~s~~~  147 (383)
T d1gy8a_          82 DFLNGVFTR----HGPIDAVVHMCAFLAV------GESVRDPLKYYDNNVVGILRLLQAMLLH----KCDKIIFSSSAAI  147 (383)
T ss_dssp             HHHHHHHHH----SCCCCEEEECCCCCCH------HHHHHCHHHHHHHHHHHHHHHHHHHHHT----TCCEEEEEEEGGG
T ss_pred             HHhhhhhhc----cceeehhhcccccccc------cccccccccccccccccccccchhhhcc----CCccccccccccc
Confidence            998777754    3478999999997543      1223446678899999999999888763    3345777766654


Q ss_pred             ccc------------------CCCCchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCC--------
Q 024145          154 EIA------------------GLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVD--------  207 (272)
Q Consensus       154 ~~~------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~--------  207 (272)
                      ...                  ......|+.+|.+.+.+++.+...   +|+.+.+++|+.+..|........        
T Consensus       148 ~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~  224 (383)
T d1gy8a_         148 FGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEA---YGIKGICLRYFNACGAHEDGDIGEHYQGSTHL  224 (383)
T ss_dssp             TBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHH---HCCEEEEEEECEEECCCTTSSCSCCSTTCCSH
T ss_pred             ccccccccccccccccccccCCCCCCHHHhhHhHHHHHHHHHHHH---hCCCEEEEecceeeccCccccccccccccchh
Confidence            321                  123467999999999999999887   479999999999888765432110        


Q ss_pred             -hhHHHHHHhhc-----------------------------CCCCCCCCChHhHHHHHHHHhcC------CCCCccccEE
Q 024145          208 -PALIESSMSQM-----------------------------GNLKGEFLKTDGIANAALYLASD------ESSYVSGQNL  251 (272)
Q Consensus       208 -~~~~~~~~~~~-----------------------------~~~~~~~~~~~dva~~~~~l~s~------~~~~~~G~~i  251 (272)
                       +....+.+...                             +...+.++..+|++++++.++..      ......++.+
T Consensus       225 ip~ii~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~  304 (383)
T d1gy8a_         225 IPIILGRVMSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVF  304 (383)
T ss_dssp             HHHHHHHHHHHHSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEE
T ss_pred             HHHHHHHHHhhccccccchhhhhhhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHHHHhhhccccccccccCccEE
Confidence             00111111100                             01113467899999998887642      2234567889


Q ss_pred             EecCceeec
Q 024145          252 VVDGGFSVV  260 (272)
Q Consensus       252 ~~dgG~~~~  260 (272)
                      ++..|..+.
T Consensus       305 Ni~s~~~~s  313 (383)
T d1gy8a_         305 NLGTSRGYS  313 (383)
T ss_dssp             EESCSCCEE
T ss_pred             EeCCCCcee
Confidence            998887654

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.70  E-value=7.8e-17  Score=130.88  Aligned_cols=218  Identities=11%  Similarity=0.007  Sum_probs=141.7

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCe--EEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           16 KVAIITGGASGIGAMAVELFHENGAK--VVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      ++||||||+|+||++++++|+++|+.  |+...|++...    ..+..++.++.+|+++.+++.+++.       ++|.+
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~v   72 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGK----EKIGGEADVFIGDITDADSINPAFQ-------GIDAL   72 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHH----HHTTCCTTEEECCTTSHHHHHHHHT-------TCSEE
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHH----HhccCCcEEEEeeeccccccccccc-------cceee
Confidence            69999999999999999999999975  55567766543    3445678899999999999877665       78999


Q ss_pred             EeCCCCCCCCCC-------CCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhh
Q 024145           94 YNNAGILDRSFG-------SILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTIS  166 (272)
Q Consensus        94 v~~ag~~~~~~~-------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~s  166 (272)
                      ||+++.......       ...............+|+.++..++......    ..+...+.++.....+......+..+
T Consensus        73 i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~s~~~~~~~~~~~~~~~~~  148 (252)
T d2q46a1          73 VILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA----GVKHIVVVGSMGGTNPDHPLNKLGNG  148 (252)
T ss_dssp             EECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH----TCSEEEEEEETTTTCTTCGGGGGGGC
T ss_pred             EEEEeeccccccccchhhhhhcccccccchhhhccccccceeeccccccc----cccccccccccccCCCCccccccccc
Confidence            999987543111       1111112334556678888988887766553    34557777776655544333333333


Q ss_pred             H-HHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCCCCCCCChHhHHHHHHHHhcCCCCC
Q 024145          167 K-YGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGEFLKTDGIANAALYLASDESSY  245 (272)
Q Consensus       167 K-~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  245 (272)
                      + .........+..+   .|+.+..++|+++.++..............    .......+.+++|+|++++.++..+.  
T Consensus       149 ~~~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~----~~~~~~~~i~~~Dva~a~~~~l~~~~--  219 (252)
T d2q46a1         149 NILVWKRKAEQYLAD---SGTPYTIIRAGGLLDKEGGVRELLVGKDDE----LLQTDTKTVPRADVAEVCIQALLFEE--  219 (252)
T ss_dssp             CHHHHHHHHHHHHHH---SSSCEEEEEECEEECSCTTSSCEEEESTTG----GGGSSCCEEEHHHHHHHHHHHTTCGG--
T ss_pred             chhhhhhhhhhhhhc---ccccceeecceEEECCCcchhhhhhccCcc----cccCCCCeEEHHHHHHHHHHHhCCcc--
Confidence            3 3333333333333   689999999999988754321110000000    01112456789999999998886543  


Q ss_pred             ccccEEEecCce
Q 024145          246 VSGQNLVVDGGF  257 (272)
Q Consensus       246 ~~G~~i~~dgG~  257 (272)
                      ..|++|++.++-
T Consensus       220 ~~g~~~~i~~~~  231 (252)
T d2q46a1         220 AKNKAFDLGSKP  231 (252)
T ss_dssp             GTTEEEEEEECC
T ss_pred             ccCcEEEEeeCC
Confidence            468999887653

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=1.6e-16  Score=129.49  Aligned_cols=199  Identities=15%  Similarity=0.112  Sum_probs=135.7

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCC--eEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGA--KVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      +++++|++|||||||.||++++++|+++|.  +|++++|++.....   .....+....+|+.+.+++.+       .+.
T Consensus        10 ~~m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~---~~~~~i~~~~~D~~~~~~~~~-------~~~   79 (232)
T d2bkaa1          10 FRMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDE---EAYKNVNQEVVDFEKLDDYAS-------AFQ   79 (232)
T ss_dssp             HHHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCS---GGGGGCEEEECCGGGGGGGGG-------GGS
T ss_pred             hCCCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcc---cccceeeeeeecccccccccc-------ccc
Confidence            457889999999999999999999999995  79999987654321   112356777788877665543       334


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHH
Q 024145           89 KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKY  168 (272)
Q Consensus        89 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~  168 (272)
                      +.|++||++|....         ........++|+.++..+++.+..    .+-.++|++|+......  ....|..+|.
T Consensus        80 ~~d~vi~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~a~~----~~v~~fi~~Ss~~~~~~--~~~~Y~~~K~  144 (232)
T d2bkaa1          80 GHDVGFCCLGTTRG---------KAGAEGFVRVDRDYVLKSAELAKA----GGCKHFNLLSSKGADKS--SNFLYLQVKG  144 (232)
T ss_dssp             SCSEEEECCCCCHH---------HHHHHHHHHHHTHHHHHHHHHHHH----TTCCEEEEECCTTCCTT--CSSHHHHHHH
T ss_pred             cccccccccccccc---------ccchhhhhhhcccccceeeecccc----cCccccccCCccccccC--ccchhHHHHH
Confidence            79999999985422         345566788999999999988765    34457999998876442  3457999999


Q ss_pred             HHHHHHHHHHHHhcCCCc-EEEEEeCCcccCCcccCCCCChhHH-HHHHhhcCCC--CCCCCChHhHHHHHHHHhcCCC
Q 024145          169 GILGLVKCLAAELGQYGI-RVNCVSPYGLATGMSMKGGVDPALI-ESSMSQMGNL--KGEFLKTDGIANAALYLASDES  243 (272)
Q Consensus       169 a~~~~~~~la~e~~~~gi-~v~~i~Pg~v~t~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~dva~~~~~l~s~~~  243 (272)
                      ..|...+.       .|. .+..++||.+..+....  ...... ...+......  .....+++|+|++++.++....
T Consensus       145 ~~E~~l~~-------~~~~~~~IlRP~~i~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~I~~~dvA~a~i~~~~~~~  214 (232)
T d2bkaa1         145 EVEAKVEE-------LKFDRYSVFRPGVLLCDRQES--RPGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPR  214 (232)
T ss_dssp             HHHHHHHT-------TCCSEEEEEECCEEECTTGGG--SHHHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTSCC
T ss_pred             Hhhhcccc-------ccccceEEecCceeecCCCcC--cHHHHHHHHHhhccCCcccCCCeEEHHHHHHHHHHHHhcCc
Confidence            88865433       233 57789999998875441  111111 1111111111  1233567999999988876554

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.54  E-value=7.3e-14  Score=115.97  Aligned_cols=197  Identities=19%  Similarity=0.115  Sum_probs=134.1

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEeC
Q 024145           17 VAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNN   96 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~   96 (272)
                      ++|||||||.||++++++|.++|++|+.++|+.                  +|++|.++++++++..     ++|++||+
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~------------------~D~~d~~~~~~~l~~~-----~~d~vih~   59 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNVEVIPTDVQD------------------LDITNVLAVNKFFNEK-----KPNVVINC   59 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT------------------CCTTCHHHHHHHHHHH-----CCSEEEEC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeechh------------------ccCCCHHHHHHHHHHc-----CCCEEEee
Confidence            589999999999999999999999999998853                  4999999998887754     78999999


Q ss_pred             CCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccc-----------cCCCCchhhh
Q 024145           97 AGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEI-----------AGLGSPAYTI  165 (272)
Q Consensus        97 ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~-----------~~~~~~~Y~~  165 (272)
                      ++....      +.........+..|+.....+.......     ...+++.||.....           +......|+.
T Consensus        60 a~~~~~------~~~~~~~~~~~~~n~~~~~~~~~~~~~~-----~~~~~~~ss~~v~~~~~~~~~~e~~~~~~~~~~~~  128 (281)
T d1vl0a_          60 AAHTAV------DKCEEQYDLAYKINAIGPKNLAAAAYSV-----GAEIVQISTDYVFDGEAKEPITEFDEVNPQSAYGK  128 (281)
T ss_dssp             CCCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHHH-----TCEEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHH
T ss_pred             cccccc------ccccccchhhcccccccccccccccccc-----cccccccccceeeeccccccccccccccchhhhhh
Confidence            986542      1223445667778888877776665542     23456666553322           1224457888


Q ss_pred             hHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHHHHhhc-----CCCCCCCCChHhHHHHHHHHhc
Q 024145          166 SKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQM-----GNLKGEFLKTDGIANAALYLAS  240 (272)
Q Consensus       166 sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~dva~~~~~l~s  240 (272)
                      +|...+.+++.       .+.....+.|+.+..+...   .............     ....+.+...+|+++++.+++.
T Consensus       129 ~k~~~e~~~~~-------~~~~~~i~R~~~vyG~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~  198 (281)
T d1vl0a_         129 TKLEGENFVKA-------LNPKYYIVRTAWLYGDGNN---FVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVID  198 (281)
T ss_dssp             HHHHHHHHHHH-------HCSSEEEEEECSEESSSSC---HHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHHHHH
T ss_pred             hhhHHHHHHHH-------hCCCccccceeEEeCCCcc---cccchhhhhccCCceeecCCceeccchhhhhhhhhhhhhh
Confidence            88887766533       2567788999999877533   1112222221111     1122467889999999999986


Q ss_pred             CCCCCccccEEEecCceeecc
Q 024145          241 DESSYVSGQNLVVDGGFSVVN  261 (272)
Q Consensus       241 ~~~~~~~G~~i~~dgG~~~~~  261 (272)
                      ...   +| .+++.++..++.
T Consensus       199 ~~~---~g-~~~~~~~~~~s~  215 (281)
T d1vl0a_         199 EKN---YG-TFHCTCKGICSW  215 (281)
T ss_dssp             HTC---CE-EEECCCBSCEEH
T ss_pred             hcc---cC-ceeEeCCCccch
Confidence            543   34 677777666543

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.50  E-value=3.8e-14  Score=113.40  Aligned_cols=187  Identities=15%  Similarity=0.108  Sum_probs=120.2

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCC--eEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGA--KVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDI   92 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   92 (272)
                      .|++|||||||.||++++++|+++|+  +|+...|++...       ..+   +..+..|..++..      ...+.+|.
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~-------~~~---~~~~~~d~~~~~~------~~~~~~d~   65 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE-------HPR---LDNPVGPLAELLP------QLDGSIDT   65 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC-------CTT---EECCBSCHHHHGG------GCCSCCSE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhh-------ccc---ccccccchhhhhh------ccccchhe
Confidence            48999999999999999999999997  566666654321       112   3345555444321      12356899


Q ss_pred             EEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHHHHH
Q 024145           93 MYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILG  172 (272)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~  172 (272)
                      +|+++|.....        ........++|+.++..+++.+..    .+-.+++++||..+..  .....|..+|...|.
T Consensus        66 vi~~~g~~~~~--------~~~~~~~~~~~~~~~~~~~~~a~~----~~v~~~i~~Ss~~~~~--~~~~~y~~~K~~~E~  131 (212)
T d2a35a1          66 AFCCLGTTIKE--------AGSEEAFRAVDFDLPLAVGKRALE----MGARHYLVVSALGADA--KSSIFYNRVKGELEQ  131 (212)
T ss_dssp             EEECCCCCHHH--------HSSHHHHHHHHTHHHHHHHHHHHH----TTCCEEEEECCTTCCT--TCSSHHHHHHHHHHH
T ss_pred             eeeeeeeeccc--------cccccccccchhhhhhhccccccc----cccccccccccccccc--ccccchhHHHHHHhh
Confidence            99999865321        112346788899999998887755    3445799999876543  345679999988776


Q ss_pred             HHHHHHHHhcCCCc-EEEEEeCCcccCCcccCCCCChhHHHHHHhhcCCC-CC--CCCChHhHHHHHHHHhcCCC
Q 024145          173 LVKCLAAELGQYGI-RVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNL-KG--EFLKTDGIANAALYLASDES  243 (272)
Q Consensus       173 ~~~~la~e~~~~gi-~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~dva~~~~~l~s~~~  243 (272)
                      ..+       ..+. +...++|+.+..+....     ...........+. .+  +....+|+|++++.++.++.
T Consensus       132 ~l~-------~~~~~~~~I~Rp~~v~G~~~~~-----~~~~~~~~~~~~~~~~~~~~i~v~DvA~ai~~~~~~~~  194 (212)
T d2a35a1         132 ALQ-------EQGWPQLTIARPSLLFGPREEF-----RLAEILAAPIARILPGKYHGIEACDLARALWRLALEEG  194 (212)
T ss_dssp             HHT-------TSCCSEEEEEECCSEESTTSCE-----EGGGGTTCCCC----CHHHHHHHHHHHHHHHHHHTCCC
T ss_pred             hcc-------ccccccceeeCCcceeCCcccc-----cHHHHHHHHHhhccCCCCcEEEHHHHHHHHHHHHcCCC
Confidence            443       2344 57889999998765331     0000000110000 01  12567999999999886654

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.49  E-value=1.1e-13  Score=116.18  Aligned_cols=214  Identities=10%  Similarity=0.001  Sum_probs=124.5

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchH-----HHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLG-----EDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGK   89 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~-----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (272)
                      .++||||||||.||++++++|+++|++|+++.|+....     +.........+.++.+|+.|.+++.+.+.       +
T Consensus         3 k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~-------~   75 (312)
T d1qyda_           3 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALK-------Q   75 (312)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHT-------T
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhcc-------C
Confidence            35699999999999999999999999999998875432     12222224678999999999998876655       6


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccC-CCCchhhhhHH
Q 024145           90 LDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAG-LGSPAYTISKY  168 (272)
Q Consensus        90 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~-~~~~~Y~~sK~  168 (272)
                      .+.++++++....      .           .|..+...++.++..    ....++++.||.+..... .....|..++.
T Consensus        76 ~~~~~~~~~~~~~------~-----------~~~~~~~~~l~~a~~----~~~~~~v~~Ss~g~~~~~~~~~~~~~~~~~  134 (312)
T d1qyda_          76 VDVVISALAGGVL------S-----------HHILEQLKLVEAIKE----AGNIKRFLPSEFGMDPDIMEHALQPGSITF  134 (312)
T ss_dssp             CSEEEECCCCSSS------S-----------TTTTTHHHHHHHHHH----SCCCSEEECSCCSSCTTSCCCCCSSTTHHH
T ss_pred             cchhhhhhhhccc------c-----------cchhhhhHHHHHHHH----hcCCcEEEEeeccccCCCcccccchhhhhh
Confidence            7888888874322      0           122223333343333    334557777765433221 12223334444


Q ss_pred             HHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHH---HHHH--hhcCCCCCCCCChHhHHHHHHHHhcCCC
Q 024145          169 GILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALI---ESSM--SQMGNLKGEFLKTDGIANAALYLASDES  243 (272)
Q Consensus       169 a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~---~~~~--~~~~~~~~~~~~~~dva~~~~~l~s~~~  243 (272)
                      .....+..+..+   .++....++|+.+..+............   .+..  .........++.++|+|++++.++.+. 
T Consensus       135 ~~~~~~~~~~~~---~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~-  210 (312)
T d1qyda_         135 IDKRKVRRAIEA---ASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDP-  210 (312)
T ss_dssp             HHHHHHHHHHHH---TTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCG-
T ss_pred             HHHHHHHHhhcc---cccceEEeccceeecCCccchhhHHHHhhhcccccccccccccccceeeHHHHHHHHHHHhcCc-
Confidence            444444444444   5788889999888764332110000000   0000  000111245788999999999888553 


Q ss_pred             CCccccEEEecCceeec
Q 024145          244 SYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       244 ~~~~G~~i~~dgG~~~~  260 (272)
                      ...++..+.+.++..++
T Consensus       211 ~~~~~~~~~~~~~~~~s  227 (312)
T d1qyda_         211 QTLNKTMYIRPPMNILS  227 (312)
T ss_dssp             GGSSSEEECCCGGGEEE
T ss_pred             cccCceEEEeCCCcCCC
Confidence            22233445555555443

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.43  E-value=4.9e-13  Score=111.46  Aligned_cols=210  Identities=13%  Similarity=0.093  Sum_probs=125.9

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHH------HHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGE------DLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~------~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      .|++|||||||.||++++++|+++|++|++++|+.....      .........+.++.+|+.+..+..+.++       
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------   75 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVK-------   75 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHH-------
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhh-------
Confidence            478999999999999999999999999999998755421      1122224568899999999998777665       


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHH
Q 024145           89 KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKY  168 (272)
Q Consensus        89 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~  168 (272)
                      ..+.++++++....                     .+...+.+++...    ...++++.||............+...+.
T Consensus        76 ~~~~vi~~~~~~~~---------------------~~~~~~~~a~~~~----~~~~~~~~s~~~~~~~~~~~~~~~~~~~  130 (307)
T d1qyca_          76 NVDVVISTVGSLQI---------------------ESQVNIIKAIKEV----GTVKRFFPSEFGNDVDNVHAVEPAKSVF  130 (307)
T ss_dssp             TCSEEEECCCGGGS---------------------GGGHHHHHHHHHH----CCCSEEECSCCSSCTTSCCCCTTHHHHH
T ss_pred             hceeeeeccccccc---------------------chhhHHHHHHHHh----ccccceeeeccccccccccccccccccc
Confidence            67999998875322                     1122233333332    3344777776544333333334444444


Q ss_pred             HHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCChhHHHH----HHhhcCCCCCCCCChHhHHHHHHHHhcCCCC
Q 024145          169 GILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIES----SMSQMGNLKGEFLKTDGIANAALYLASDESS  244 (272)
Q Consensus       169 a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  244 (272)
                      ...........+   .|+....++|+.+..+.............+    ...........++..+|+|++++.++.... 
T Consensus       131 ~~~~~~~~~~~~---~~~~~~i~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~-  206 (307)
T d1qyca_         131 EVKAKVRRAIEA---EGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPR-  206 (307)
T ss_dssp             HHHHHHHHHHHH---HTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGG-
T ss_pred             cccccccchhhc---cCCCceecccceecCCCccchhhhhhhhhhcccceeeecccccccCCcHHHHHHHHHHHhcChh-
Confidence            443333333334   477888999998877643321000000000    000001112457899999999998886442 


Q ss_pred             CccccEEEecCceeec
Q 024145          245 YVSGQNLVVDGGFSVV  260 (272)
Q Consensus       245 ~~~G~~i~~dgG~~~~  260 (272)
                      ..++..+.+.++..++
T Consensus       207 ~~~~~~~~~~~~~~~s  222 (307)
T d1qyca_         207 TLNKTLYLRLPANTLS  222 (307)
T ss_dssp             GTTEEEECCCGGGEEE
T ss_pred             hcCceeEEeCCCCccC
Confidence            2234444555666554

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.37  E-value=1.1e-11  Score=106.20  Aligned_cols=211  Identities=13%  Similarity=0.025  Sum_probs=126.3

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHH-HHHHHHHHHHhCCccE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEV-INLVDTAVSKFGKLDI   92 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~-~~~~~~~~~~~g~id~   92 (272)
                      +.|+++||||||.||++++++|+++|++|+++.|+........-.....+.++++|+.|..++ +.+       +...|.
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~v~~~~gD~~d~~~~~~~a-------~~~~~~   74 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTL-------FEGAHL   74 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHH-------HTTCSE
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhhhhcccCCCEEEEeeCCCcHHHHHHH-------hcCCce
Confidence            579999999999999999999999999999999987764332222235789999999986553 322       236788


Q ss_pred             EEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccccccc--CCCCchhhhhHHHH
Q 024145           93 MYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIA--GLGSPAYTISKYGI  170 (272)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~--~~~~~~Y~~sK~a~  170 (272)
                      ++++......                  .++.....++.++..    .+..++++.||......  ......|..+|...
T Consensus        75 ~~~~~~~~~~------------------~~~~~~~~~~~aa~~----agv~~~v~~Ss~~~~~~~~~~~~~~~~~~k~~~  132 (350)
T d1xgka_          75 AFINTTSQAG------------------DEIAIGKDLADAAKR----AGTIQHYIYSSMPDHSLYGPWPAVPMWAPKFTV  132 (350)
T ss_dssp             EEECCCSTTS------------------CHHHHHHHHHHHHHH----HSCCSEEEEEECCCGGGTSSCCCCTTTHHHHHH
T ss_pred             EEeecccccc------------------hhhhhhhHHHHHHHH----hCCCceEEEeeccccccCCcccchhhhhhHHHH
Confidence            8776542211                  122223344454443    23345777787654332  33345677788766


Q ss_pred             HHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCCh--hHHHH-HHhhcCCCC----CCCCC-hHhHHHHHHHHhcCC
Q 024145          171 LGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDP--ALIES-SMSQMGNLK----GEFLK-TDGIANAALYLASDE  242 (272)
Q Consensus       171 ~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~--~~~~~-~~~~~~~~~----~~~~~-~~dva~~~~~l~s~~  242 (272)
                      +.+.+       ..++....+.|+.+............  ..... ......+..    ..+.+ .+|+++++..++.+.
T Consensus       133 ~~~~~-------~~~~~~~~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~~~  205 (350)
T d1xgka_         133 ENYVR-------QLGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDG  205 (350)
T ss_dssp             HHHHH-------TSSSCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHC
T ss_pred             HHHHH-------hhccCceeeeeceeeccccccccccccccccccccceeeecccCCCcceEEEeHHHHHHHHHHHHhCC
Confidence            55433       24577888999877654332111100  00000 000000000    11234 378999988887654


Q ss_pred             CCCccccEEEecCceeecc
Q 024145          243 SSYVSGQNLVVDGGFSVVN  261 (272)
Q Consensus       243 ~~~~~G~~i~~dgG~~~~~  261 (272)
                      ....+|+.+.+.|. .++.
T Consensus       206 ~~~~~G~~~~~~g~-~~T~  223 (350)
T d1xgka_         206 PQKWNGHRIALTFE-TLSP  223 (350)
T ss_dssp             HHHHTTCEEEECSE-EECH
T ss_pred             hhhcCCeEEEEeCC-cCCH
Confidence            34457999999864 4443

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.34  E-value=8.2e-12  Score=104.27  Aligned_cols=215  Identities=14%  Similarity=0.176  Sum_probs=130.4

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHH--HhCCccEEE
Q 024145           18 AIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVS--KFGKLDIMY   94 (272)
Q Consensus        18 vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~--~~g~id~lv   94 (272)
                      ||||||+|+||++++++|+++|+ .|+.+++-..... .......    ..+|..+.++.   ......  .+..+++++
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~-~~~~~~~----~~~~~~~~~~~---~~~~~~~~~~~~~~~i~   73 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-FVNLVDL----NIADYMDKEDF---LIQIMAGEEFGDVEAIF   73 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG-GHHHHTS----CCSEEEEHHHH---HHHHHTTCCCSSCCEEE
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcch-hhccccc----chhhhccchHH---HHHHhhhhcccchhhhh
Confidence            79999999999999999999997 5777763322211 1111111    11233333332   333332  345688999


Q ss_pred             eCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccccccc-----------CCCCchh
Q 024145           95 NNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIA-----------GLGSPAY  163 (272)
Q Consensus        95 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~-----------~~~~~~Y  163 (272)
                      |.|+....     ...   ......+.|+.+...+.+.+.....     ++++.||.....+           ......|
T Consensus        74 ~~aa~~~~-----~~~---~~~~~~~~~~~~~~~~l~~~~~~~i-----~~v~~ss~~~~~~~~~~~~~~~~~~~~~~~Y  140 (307)
T d1eq2a_          74 HEGACSST-----TEW---DGKYMMDNNYQYSKELLHYCLEREI-----PFLYASSAATYGGRTSDFIESREYEKPLNVY  140 (307)
T ss_dssp             ECCSCCCT-----TCC---CHHHHHHHTHHHHHHHHHHHHHHTC-----CEEEEEEGGGGTTCCSCBCSSGGGCCCSSHH
T ss_pred             hhcccccc-----ccc---ccccccccccccccccccccccccc-----ccccccccccccccccccccccccccccccc
Confidence            99875432     111   2344567778888888777665432     2555555544322           2345689


Q ss_pred             hhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCcccCCCCC---hhHHHH-HHhh--------cCCCCCCCCChHhH
Q 024145          164 TISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVD---PALIES-SMSQ--------MGNLKGEFLKTDGI  231 (272)
Q Consensus       164 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~---~~~~~~-~~~~--------~~~~~~~~~~~~dv  231 (272)
                      +.+|.+.+.+++.++.+   .++.+..++|..+..|........   ...... ....        .....+.+...+|+
T Consensus       141 ~~~K~~~e~~~~~~~~~---~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~  217 (307)
T d1eq2a_         141 GYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDV  217 (307)
T ss_dssp             HHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHH
T ss_pred             ccccchhhhhccccccc---cccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeecccH
Confidence            99999999999998777   578899999998888754321110   111111 1111        11112467889999


Q ss_pred             HHHHHHHhcCCCCCccccEEEecCceeec
Q 024145          232 ANAALYLASDESSYVSGQNLVVDGGFSVV  260 (272)
Q Consensus       232 a~~~~~l~s~~~~~~~G~~i~~dgG~~~~  260 (272)
                      +.++..++....    ...+++..|...+
T Consensus       218 ~~~~~~~~~~~~----~~~~~~~~~~~~s  242 (307)
T d1eq2a_         218 ADVNLWFLENGV----SGIFNLGTGRAES  242 (307)
T ss_dssp             HHHHHHHHHHCC----CEEEEESCSCCBC
T ss_pred             HHHHHHHhhhcc----ccccccccccchh
Confidence            999998776542    3567777776554

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.31  E-value=3.9e-12  Score=105.90  Aligned_cols=129  Identities=17%  Similarity=0.099  Sum_probs=92.6

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEeC
Q 024145           17 VAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNN   96 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~   96 (272)
                      ++|||||+|.||++++++|.++|+.|.+ +++...              +..|++|.+.+++++...     ++|+|||+
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~~v~~-~~~~~~--------------~~~Dl~~~~~~~~~i~~~-----~~D~Vih~   61 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGNLIAL-DVHSKE--------------FCGDFSNPKGVAETVRKL-----RPDVIVNA   61 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSEEEEE-CTTCSS--------------SCCCTTCHHHHHHHHHHH-----CCSEEEEC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEE-ECCCcc--------------ccCcCCCHHHHHHHHHHc-----CCCEEEEe
Confidence            5999999999999999999999965544 443321              346999999998888765     69999999


Q ss_pred             CCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEeccccccc-----------CCCCchhhh
Q 024145           97 AGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIA-----------GLGSPAYTI  165 (272)
Q Consensus        97 ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~-----------~~~~~~Y~~  165 (272)
                      ||.....      .+.+.....++.|+.+...+.+++..     ...+++++||......           ......|+.
T Consensus        62 Aa~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~-----~~~~~~~~ss~~~~~~~~~~~~~E~~~~~p~~~y~~  130 (298)
T d1n2sa_          62 AAHTAVD------KAESEPELAQLLNATSVEAIAKAANE-----TGAWVVHYSTDYVFPGTGDIPWQETDATSPLNVYGK  130 (298)
T ss_dssp             CCCCCHH------HHTTCHHHHHHHHTHHHHHHHHHHTT-----TTCEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHH
T ss_pred             ccccccc------ccccCccccccccccccccchhhhhc-----cccccccccccccccCCCCCCCccccccCCCchHhh
Confidence            9976431      11233457788999999888887642     3456777777654322           113357999


Q ss_pred             hHHHHHHHHHH
Q 024145          166 SKYGILGLVKC  176 (272)
Q Consensus       166 sK~a~~~~~~~  176 (272)
                      +|.+.+.+.+.
T Consensus       131 ~k~~~e~~~~~  141 (298)
T d1n2sa_         131 TKLAGEKALQD  141 (298)
T ss_dssp             HHHHHHHHHHH
T ss_pred             hhhhhhhhHHh
Confidence            99888776543

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.93  E-value=3.8e-14  Score=111.64  Aligned_cols=168  Identities=13%  Similarity=0.003  Sum_probs=89.6

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhC---Cce--------------EEEEecCCCHHHHHHH
Q 024145           17 VAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLG---QDV--------------CYIHCDISNEDEVINL   79 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~---~~~--------------~~~~~D~~~~~~~~~~   79 (272)
                      ++.|+||+|++|+++|++|+++|++|++.+|++++.+++.++++   ...              ...............+
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNEDAAEACDIAVLTIPWEHAIDTA   81 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEEHHHHHHHCSEEEECSCHHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEeeccccccchhhhhhhheeeeccchHH
Confidence            46788888999999999999999999999999998888877652   111              1222222222222221


Q ss_pred             HHHHHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCC
Q 024145           80 VDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLG  159 (272)
Q Consensus        80 ~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~  159 (272)
                      ....... ................ ......+              ...+.+.....+........+++.+.........
T Consensus        82 ~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (212)
T d1jaya_          82 RDLKNIL-REKIVVSPLVPVSRGA-KGFTYSS--------------ERSAAEIVAEVLESEKVVSALHTIPAARFANLDE  145 (212)
T ss_dssp             HHTHHHH-TTSEEEECCCCEECCT-TCCEECC--------------SSCHHHHHHHHHTCSCEEECCTTCCHHHHHCTTC
T ss_pred             HHhhhhh-cccccccccccccccc-ccccccc--------------cchhhhhhhhhhhhhcccccceeecHHHhcCccc
Confidence            1111111 1111211111111110 0000000              0011112223333333233333334433334445


Q ss_pred             CchhhhhHHHHHHHHHHHHHHhcCCCcEEEEEeCCcccCCc
Q 024145          160 SPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGM  200 (272)
Q Consensus       160 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~  200 (272)
                      ...|..++++....++..+.++..+.+.++.++||.+++..
T Consensus       146 ~~~~~~~~a~~~~~a~~~~~~~~~~~~g~~~~~~G~l~~a~  186 (212)
T d1jaya_         146 KFDWDVPVCGDDDESKKVVMSLISEIDGLRPLDAGPLSNSR  186 (212)
T ss_dssp             CCCEEEEEEESCHHHHHHHHHHHHHSTTEEEEEEESGGGHH
T ss_pred             ccCccceEEeCCHHHHHHHHHHHhhCCCeEEEEeChHHHHH
Confidence            55677777777777778777776667888999999887643

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=98.21  E-value=5.9e-06  Score=61.83  Aligned_cols=75  Identities=19%  Similarity=0.377  Sum_probs=59.1

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGK   89 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (272)
                      .++++|++||.|+ |++|+.++++|...|+ ++.++.|+.++.+++.++++..+  +  +   .+++...+.       .
T Consensus        20 ~~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~~--~--~---~~~~~~~l~-------~   84 (159)
T d1gpja2          20 GSLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEA--V--R---FDELVDHLA-------R   84 (159)
T ss_dssp             SCCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEE--C--C---GGGHHHHHH-------T
T ss_pred             CCcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhccc--c--c---chhHHHHhc-------c
Confidence            4689999999998 9999999999999998 58999999999998988876432  2  2   223333233       7


Q ss_pred             ccEEEeCCCCC
Q 024145           90 LDIMYNNAGIL  100 (272)
Q Consensus        90 id~lv~~ag~~  100 (272)
                      .|++|++.+..
T Consensus        85 ~Divi~atss~   95 (159)
T d1gpja2          85 SDVVVSATAAP   95 (159)
T ss_dssp             CSEEEECCSSS
T ss_pred             CCEEEEecCCC
Confidence            89999999854

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.09  E-value=5.7e-06  Score=62.78  Aligned_cols=79  Identities=13%  Similarity=0.213  Sum_probs=56.1

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      .|+++||+||+|++|...++.....|++|+++++++++. +..++++....   .|..+.+..+++.+....  ..+|++
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~-~~~~~~Ga~~v---i~~~~~~~~~~i~~~t~~--~g~d~v  101 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQ-KIVLQNGAHEV---FNHREVNYIDKIKKYVGE--KGIDII  101 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHH-HHHHHTTCSEE---EETTSTTHHHHHHHHHCT--TCEEEE
T ss_pred             CCCEEEEEeccccccccccccccccCccccccccccccc-ccccccCcccc---cccccccHHHHhhhhhcc--CCceEE
Confidence            688999999999999999998888899999999877654 44556765422   355555443333222211  258999


Q ss_pred             EeCCC
Q 024145           94 YNNAG   98 (272)
Q Consensus        94 v~~ag   98 (272)
                      +.+.|
T Consensus       102 ~d~~g  106 (174)
T d1yb5a2         102 IEMLA  106 (174)
T ss_dssp             EESCH
T ss_pred             eeccc
Confidence            99886

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=98.07  E-value=1.7e-05  Score=60.56  Aligned_cols=82  Identities=13%  Similarity=0.242  Sum_probs=62.9

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHHHHH---HHhC--CceEEEEecCCCHHHHHHHHHHHH
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGEDLA---DKLG--QDVCYIHCDISNEDEVINLVDTAV   84 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~~~~---~~~~--~~~~~~~~D~~~~~~~~~~~~~~~   84 (272)
                      .++++|+++|.|+ ||.|++++.+|++.|. +++++.|+.+..+++.   +.++  ........|+.+.+++.....   
T Consensus        14 ~~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---   89 (182)
T d1vi2a1          14 FDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALA---   89 (182)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH---
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhc---
Confidence            3679999999997 7999999999999998 5889999877665443   3332  234566788988887765544   


Q ss_pred             HHhCCccEEEeCCCCC
Q 024145           85 SKFGKLDIMYNNAGIL  100 (272)
Q Consensus        85 ~~~g~id~lv~~ag~~  100 (272)
                          ..|++||+....
T Consensus        90 ----~~diiIN~Tp~G  101 (182)
T d1vi2a1          90 ----SADILTNGTKVG  101 (182)
T ss_dssp             ----TCSEEEECSSTT
T ss_pred             ----ccceeccccCCc
Confidence                689999998753

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=98.05  E-value=6.2e-06  Score=62.80  Aligned_cols=104  Identities=13%  Similarity=0.167  Sum_probs=67.4

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      .|.++||+||+||+|....+-....|++|+.+.+++++.+ ..++++.....   |-.+ . ..+....+  ..+++|++
T Consensus        31 ~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~-~~~~lGa~~vi---~~~~-~-~~~~~~~~--~~~gvD~v  102 (176)
T d1xa0a2          31 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHD-YLRVLGAKEVL---ARED-V-MAERIRPL--DKQRWAAA  102 (176)
T ss_dssp             GGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHH-HHHHTTCSEEE---ECC-----------C--CSCCEEEE
T ss_pred             CCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHH-HHHhcccceee---ecch-h-HHHHHHHh--hccCcCEE
Confidence            5789999999999999988888888999999999887755 44566655333   2111 1 11111111  22479999


Q ss_pred             EeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccc
Q 024145           94 YNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEI  155 (272)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~  155 (272)
                      +.+.|...          +                  ...+..+  +..||++.++...+..
T Consensus       103 id~vgg~~----------~------------------~~~l~~l--~~~Griv~~G~~~g~~  134 (176)
T d1xa0a2         103 VDPVGGRT----------L------------------ATVLSRM--RYGGAVAVSGLTGGAE  134 (176)
T ss_dssp             EECSTTTT----------H------------------HHHHHTE--EEEEEEEECSCCSSSC
T ss_pred             EEcCCchh----------H------------------HHHHHHh--CCCceEEEeecccCcc
Confidence            99998421          1                  1133334  3579999998876544

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.04  E-value=1.3e-05  Score=60.47  Aligned_cols=74  Identities=16%  Similarity=0.227  Sum_probs=57.7

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEE
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMY   94 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv   94 (272)
                      +|.++|.|| |.+|+.++++|+++|++|++.+|+.+.++++.+..+. ......+..+.......+.       ..|.++
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~~-~~~~~~~~~~~~~~~~~i~-------~~~~~i   72 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQH-STPISLDVNDDAALDAEVA-------KHDLVI   72 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCTT-EEEEECCTTCHHHHHHHHT-------TSSEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcccc-cccccccccchhhhHhhhh-------ccceeE
Confidence            689999987 9999999999999999999999999999888876643 4445566666666554443       567776


Q ss_pred             eCC
Q 024145           95 NNA   97 (272)
Q Consensus        95 ~~a   97 (272)
                      ...
T Consensus        73 ~~~   75 (182)
T d1e5qa1          73 SLI   75 (182)
T ss_dssp             ECS
T ss_pred             eec
Confidence            554

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=98.03  E-value=9.7e-06  Score=61.94  Aligned_cols=79  Identities=20%  Similarity=0.338  Sum_probs=55.9

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      .|.++||+||+|++|.+.++.....|++|+.+.+++++.+ ..++.+....+..-|-...+.+   .+..  ...++|++
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~-~~~~~Ga~~vi~~~~~~~~~~~---~~~~--~~~Gvd~v  102 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIA-YLKQIGFDAAFNYKTVNSLEEA---LKKA--SPDGYDCY  102 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHHHTTCSEEEETTSCSCHHHH---HHHH--CTTCEEEE
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHH-HHHhhhhhhhcccccccHHHHH---HHHh--hcCCCcee
Confidence            5899999999999999999988899999999998877554 4455665444333333333332   2221  12369999


Q ss_pred             EeCCC
Q 024145           94 YNNAG   98 (272)
Q Consensus        94 v~~ag   98 (272)
                      +.+.|
T Consensus       103 ~D~vG  107 (182)
T d1v3va2         103 FDNVG  107 (182)
T ss_dssp             EESSC
T ss_pred             EEecC
Confidence            99997

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=97.99  E-value=5e-05  Score=56.99  Aligned_cols=82  Identities=22%  Similarity=0.280  Sum_probs=56.7

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHh-CCccE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKF-GKLDI   92 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~id~   92 (272)
                      .|.+++|+| +|++|...++.+...|++|+++++++++.+.. ++++....+. .|-. .++.....+++.+.. ..+|+
T Consensus        26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a-~~~ga~~~~~-~~~~-~~~~~~~~~~~~~~~g~g~D~  101 (170)
T d1e3ja2          26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVA-KNCGADVTLV-VDPA-KEEESSIIERIRSAIGDLPNV  101 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHTTCSEEEE-CCTT-TSCHHHHHHHHHHHSSSCCSE
T ss_pred             CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHH-HHcCCcEEEe-cccc-ccccchhhhhhhcccccCCce
Confidence            567899997 68999999998888999999999998876544 5565543332 2221 122233345555544 36999


Q ss_pred             EEeCCCC
Q 024145           93 MYNNAGI   99 (272)
Q Consensus        93 lv~~ag~   99 (272)
                      +|.++|.
T Consensus       102 vid~~g~  108 (170)
T d1e3ja2         102 TIDCSGN  108 (170)
T ss_dssp             EEECSCC
T ss_pred             eeecCCC
Confidence            9999983

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.95  E-value=9.8e-06  Score=61.28  Aligned_cols=77  Identities=13%  Similarity=0.087  Sum_probs=57.6

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      .+++||.+||.|+ ||.+++++..|.+.|.+|+++.|+.++.+++.+...........+..+.            .....
T Consensus        14 ~~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~~~~------------~~~~~   80 (170)
T d1nyta1          14 FIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDEL------------EGHEF   80 (170)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGGG------------TTCCC
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcccccccccccc------------ccccc
Confidence            3578999999996 8999999999999999999999999998888877643222222332221            11368


Q ss_pred             cEEEeCCCCC
Q 024145           91 DIMYNNAGIL  100 (272)
Q Consensus        91 d~lv~~ag~~  100 (272)
                      |++||+....
T Consensus        81 dliIN~Tp~G   90 (170)
T d1nyta1          81 DLIINATSSG   90 (170)
T ss_dssp             SEEEECCSCG
T ss_pred             ceeecccccC
Confidence            9999988654

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.88  E-value=1.5e-05  Score=60.52  Aligned_cols=77  Identities=21%  Similarity=0.237  Sum_probs=56.7

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHh--CCcc
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKF--GKLD   91 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g~id   91 (272)
                      .|+++||+||+|++|...++.....|++|+.+++++++.+. .++++... +  +|-.+++-.+    ++.+..  ..+|
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~-~~~lGa~~-v--i~~~~~d~~~----~v~~~t~g~g~d   99 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQS-ALKAGAWQ-V--INYREEDLVE----RLKEITGGKKVR   99 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHH-HHHHTCSE-E--EETTTSCHHH----HHHHHTTTCCEE
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHH-HHhcCCeE-E--EECCCCCHHH----HHHHHhCCCCeE
Confidence            47899999999999999999888899999999999887654 45666542 2  3555544333    333322  3589


Q ss_pred             EEEeCCC
Q 024145           92 IMYNNAG   98 (272)
Q Consensus        92 ~lv~~ag   98 (272)
                      +++.+.|
T Consensus       100 ~v~d~~g  106 (179)
T d1qora2         100 VVYDSVG  106 (179)
T ss_dssp             EEEECSC
T ss_pred             EEEeCcc
Confidence            9999887

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.84  E-value=1.8e-05  Score=60.27  Aligned_cols=77  Identities=22%  Similarity=0.321  Sum_probs=55.6

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHh--CCcc
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKF--GKLD   91 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g~id   91 (272)
                      .|+++||+||+|++|...++.+...|++|+++.+++++.+ ..++.+....   .|-.+++-    .+++++..  .++|
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~-~l~~~Ga~~v---i~~~~~~~----~~~v~~~t~~~g~d   96 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKRE-MLSRLGVEYV---GDSRSVDF----ADEILELTDGYGVD   96 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHH-HHHTTCCSEE---EETTCSTH----HHHHHHHTTTCCEE
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeeccccccc-cccccccccc---ccCCccCH----HHHHHHHhCCCCEE
Confidence            5789999999999999999988888999999998876654 4556665422   34444332    23444433  3599


Q ss_pred             EEEeCCC
Q 024145           92 IMYNNAG   98 (272)
Q Consensus        92 ~lv~~ag   98 (272)
                      +++.+.|
T Consensus        97 ~v~d~~g  103 (183)
T d1pqwa_          97 VVLNSLA  103 (183)
T ss_dssp             EEEECCC
T ss_pred             EEEeccc
Confidence            9999987

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.79  E-value=4.2e-05  Score=55.07  Aligned_cols=72  Identities=17%  Similarity=0.278  Sum_probs=58.6

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEeC
Q 024145           17 VAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNN   96 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~   96 (272)
                      +++|.|+ |.+|+.+++.|.++|+.|++++++++..+.+.++.  ...++..|.++++.++++-      ....|.++..
T Consensus         2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~--~~~vi~Gd~~~~~~l~~~~------i~~a~~vv~~   72 (132)
T d1lssa_           2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI--DALVINGDCTKIKTLEDAG------IEDADMYIAV   72 (132)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC--SSEEEESCTTSHHHHHHTT------TTTCSEEEEC
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhh--hhhhccCcccchhhhhhcC------hhhhhhhccc
Confidence            6889997 99999999999999999999999998887776654  4678899999999876541      1257887765


Q ss_pred             C
Q 024145           97 A   97 (272)
Q Consensus        97 a   97 (272)
                      .
T Consensus        73 t   73 (132)
T d1lssa_          73 T   73 (132)
T ss_dssp             C
T ss_pred             C
Confidence            4

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.75  E-value=4.3e-05  Score=58.12  Aligned_cols=80  Identities=20%  Similarity=0.322  Sum_probs=55.4

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHh--CCc
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKF--GKL   90 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g~i   90 (272)
                      .|.++||+|+ |++|...++.+...|+ +|+++++++++.+ ..++++.... +...-.+..+.   .+++.+..  ..+
T Consensus        28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~-~a~~lGa~~v-i~~~~~~~~~~---~~~i~~~~~~~g~  101 (182)
T d1vj0a2          28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLK-LAEEIGADLT-LNRRETSVEER---RKAIMDITHGRGA  101 (182)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHH-HHHHTTCSEE-EETTTSCHHHH---HHHHHHHTTTSCE
T ss_pred             CCCEEEEECC-Cccchhheeccccccccccccccccccccc-ccccccceEE-EeccccchHHH---HHHHHHhhCCCCc
Confidence            6889999997 8999999999988998 7999999888775 4466765432 22222233333   23333332  259


Q ss_pred             cEEEeCCCC
Q 024145           91 DIMYNNAGI   99 (272)
Q Consensus        91 d~lv~~ag~   99 (272)
                      |++|.+.|.
T Consensus       102 Dvvid~vG~  110 (182)
T d1vj0a2         102 DFILEATGD  110 (182)
T ss_dssp             EEEEECSSC
T ss_pred             eEEeecCCc
Confidence            999999974

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.75  E-value=2.8e-05  Score=50.40  Aligned_cols=42  Identities=31%  Similarity=0.506  Sum_probs=36.5

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHH
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDL   55 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~   55 (272)
                      ++.++||+||+||+|....+.+...|++|+.+.+++++.+.+
T Consensus        31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~   72 (77)
T d1o8ca2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL   72 (77)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHH
Confidence            678999999999999999998888899999999888766533

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.72  E-value=6.8e-05  Score=59.04  Aligned_cols=82  Identities=20%  Similarity=0.200  Sum_probs=58.2

Q ss_pred             CCCCCCcEEEEeCC----------------CChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCH
Q 024145           10 FKRLEGKVAIITGG----------------ASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNE   73 (272)
Q Consensus        10 ~~~l~~k~vlItGa----------------s~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~   73 (272)
                      +.+|+||++|||+|                ||..|.++|+++..+|++|.++......      ..+..+..+  .+.+.
T Consensus         1 ~~dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~------~~p~~~~~~--~~~t~   72 (223)
T d1u7za_           1 VNDLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL------PTPPFVKRV--DVMTA   72 (223)
T ss_dssp             CCTTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCC------CCCTTEEEE--ECCSH
T ss_pred             CcccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhccccc------Ccccccccc--eehhh
Confidence            35789999999976                6889999999999999999887654321      112334333  44556


Q ss_pred             HHHHHHHHHHHHHhCCccEEEeCCCCCCC
Q 024145           74 DEVINLVDTAVSKFGKLDIMYNNAGILDR  102 (272)
Q Consensus        74 ~~~~~~~~~~~~~~g~id~lv~~ag~~~~  102 (272)
                      +++...+.   +.+...|++|++|++...
T Consensus        73 ~~m~~~~~---~~~~~~D~~i~aAAvsDf   98 (223)
T d1u7za_          73 LEMEAAVN---ASVQQQNIFIGCAAVADY   98 (223)
T ss_dssp             HHHHHHHH---HHGGGCSEEEECCBCCSE
T ss_pred             HHHHHHHH---hhhccceeEeeeechhhh
Confidence            66554443   444568999999998765

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.66  E-value=6.8e-05  Score=56.55  Aligned_cols=74  Identities=14%  Similarity=0.179  Sum_probs=57.3

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCC--ceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQ--DVCYIHCDISNEDEVINLVDTAVSKFGK   89 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (272)
                      ++++|.++|.|+ ||.+++++..|.+.+.+|+++.|+.++.+.+.+..+.  .+..+..|-..              ...
T Consensus        15 ~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~~~--------------~~~   79 (171)
T d1p77a1          15 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDSIP--------------LQT   79 (171)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGCC--------------CSC
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccccchhhhcccc--------------ccc
Confidence            568999999985 8889999999999888999999999998888887753  34444443211              236


Q ss_pred             ccEEEeCCCCC
Q 024145           90 LDIMYNNAGIL  100 (272)
Q Consensus        90 id~lv~~ag~~  100 (272)
                      .|++||+....
T Consensus        80 ~diiIN~tp~g   90 (171)
T d1p77a1          80 YDLVINATSAG   90 (171)
T ss_dssp             CSEEEECCCC-
T ss_pred             cceeeeccccc
Confidence            89999998754

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.65  E-value=0.00014  Score=54.61  Aligned_cols=75  Identities=21%  Similarity=0.331  Sum_probs=53.3

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDI   92 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   92 (272)
                      ..|+++||+||+|++|...++.+...|++|+.+++++++.+ ..++++....+   |..+.      ..++. ...++|+
T Consensus        26 ~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~-~~~~lGa~~~i---~~~~~------~~~~~-~~~g~D~   94 (171)
T d1iz0a2          26 RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLA-LPLALGAEEAA---TYAEV------PERAK-AWGGLDL   94 (171)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSH-HHHHTTCSEEE---EGGGH------HHHHH-HTTSEEE
T ss_pred             CCCCEEEEEeccccchhhhhhhhcccccccccccccccccc-cccccccceee---ehhhh------hhhhh-ccccccc
Confidence            37889999999999999999888888999999998876655 44566654332   32221      12222 2346999


Q ss_pred             EEeCCC
Q 024145           93 MYNNAG   98 (272)
Q Consensus        93 lv~~ag   98 (272)
                      +|.+.|
T Consensus        95 v~d~~G  100 (171)
T d1iz0a2          95 VLEVRG  100 (171)
T ss_dssp             EEECSC
T ss_pred             cccccc
Confidence            999765

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.63  E-value=5e-05  Score=58.13  Aligned_cols=78  Identities=22%  Similarity=0.330  Sum_probs=53.3

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCe-EEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGAK-VVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      +++|||+||+||+|...++-....|++ |+.++++++...++.++++....   .|..+++. .+.+.++..  ..+|++
T Consensus        31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad~v---i~~~~~~~-~~~~~~~~~--~GvDvv  104 (187)
T d1vj1a2          31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDAA---VNYKTGNV-AEQLREACP--GGVDVY  104 (187)
T ss_dssp             CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCSEE---EETTSSCH-HHHHHHHCT--TCEEEE
T ss_pred             CCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccceEE---eeccchhH-HHHHHHHhc--cCceEE
Confidence            479999999999999988887778986 45566777777777777775432   24443332 222233222  369999


Q ss_pred             EeCCC
Q 024145           94 YNNAG   98 (272)
Q Consensus        94 v~~ag   98 (272)
                      +.+.|
T Consensus       105 ~D~vG  109 (187)
T d1vj1a2         105 FDNVG  109 (187)
T ss_dssp             EESSC
T ss_pred             EecCC
Confidence            99987

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=97.59  E-value=8.7e-05  Score=56.78  Aligned_cols=84  Identities=19%  Similarity=0.188  Sum_probs=52.3

Q ss_pred             CCc-EEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHH---HHHhCCceEEEEecCCCHHHHHHHHHHHHH-HhC
Q 024145           14 EGK-VAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDL---ADKLGQDVCYIHCDISNEDEVINLVDTAVS-KFG   88 (272)
Q Consensus        14 ~~k-~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~g   88 (272)
                      .|. +++++||+|++|.+.++-....|++|+.+.|+.+..++.   .++++....+. .|-.+..++...+.++.. ..+
T Consensus        28 ~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad~vi~-~~~~~~~~~~~~v~~~~~~~g~  106 (189)
T d1gu7a2          28 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVIT-EDQNNSREFGPTIKEWIKQSGG  106 (189)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEEE-HHHHHCGGGHHHHHHHHHHHTC
T ss_pred             CCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhccccEEEe-ccccchhHHHHHHHHHHhhccC
Confidence            344 455579999999998888777899999988877665543   35566543322 211111122222333333 345


Q ss_pred             CccEEEeCCC
Q 024145           89 KLDIMYNNAG   98 (272)
Q Consensus        89 ~id~lv~~ag   98 (272)
                      ++|+++.+.|
T Consensus       107 ~vdvv~D~vg  116 (189)
T d1gu7a2         107 EAKLALNCVG  116 (189)
T ss_dssp             CEEEEEESSC
T ss_pred             CceEEEECCC
Confidence            7999999887

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.55  E-value=0.0011  Score=48.39  Aligned_cols=113  Identities=19%  Similarity=0.196  Sum_probs=68.2

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCC--eEEEeecCcchHHHHHHHh-------CCceEEEEecCCCHHHHHHHHHH
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGA--KVVIADVQDKLGEDLADKL-------GQDVCYIHCDISNEDEVINLVDT   82 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~   82 (272)
                      +-.++++.|.|+ |.+|.+++..|+.+|.  ++++.+++++..+....++       ...+.+...|.   ++       
T Consensus         3 ~~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~---~~-------   71 (148)
T d1ldna1           3 NNGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY---DD-------   71 (148)
T ss_dssp             TTTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG---GG-------
T ss_pred             CCCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH---HH-------
Confidence            346678999997 9999999999999884  7999999887654333322       12333333332   21       


Q ss_pred             HHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEec
Q 024145           83 AVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTAS  150 (272)
Q Consensus        83 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss  150 (272)
                          ..+-|++|..+|....+ +   ....    +.+..|..-.-.+.+.+.++   .+.+.++++|-
T Consensus        72 ----l~daDvvvitag~~~~~-~---~~R~----dl~~~N~~i~~~i~~~i~~~---~p~a~~ivvtN  124 (148)
T d1ldna1          72 ----CRDADLVVICAGANQKP-G---ETRL----DLVDKNIAIFRSIVESVMAS---GFQGLFLVATN  124 (148)
T ss_dssp             ----TTTCSEEEECCSCCCCT-T---TCSG----GGHHHHHHHHHHHHHHHHHH---TCCSEEEECSS
T ss_pred             ----hccceeEEEeccccccc-C---cchh----HHHHHHHHHHHHHHHHHHhh---CCCceEEEecC
Confidence                23689999999975432 1   1112    22344544444444444433   24566776654

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.52  E-value=0.00048  Score=51.47  Aligned_cols=80  Identities=20%  Similarity=0.362  Sum_probs=57.4

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHh-CCcc
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKF-GKLD   91 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~id   91 (272)
                      .|.+++|.|+ |++|...+..+...|+ +|+++++++.+.+ +.++++... ++..+-.+..+..+.+.   ..+ ..+|
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~-~a~~~Ga~~-~~~~~~~~~~~~~~~~~---~~~g~g~D   99 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLS-KAKEIGADL-VLQISKESPQEIARKVE---GQLGCKPE   99 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHH-HHHHTTCSE-EEECSSCCHHHHHHHHH---HHHTSCCS
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHH-HHHHhCCcc-ccccccccccccccccc---ccCCCCce
Confidence            5678999986 9999999999988998 7999999988776 445666543 33344445555444333   333 3699


Q ss_pred             EEEeCCCC
Q 024145           92 IMYNNAGI   99 (272)
Q Consensus        92 ~lv~~ag~   99 (272)
                      ++|.+.|.
T Consensus       100 vvid~~G~  107 (171)
T d1pl8a2         100 VTIECTGA  107 (171)
T ss_dssp             EEEECSCC
T ss_pred             EEEeccCC
Confidence            99999984

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=97.52  E-value=0.001  Score=48.47  Aligned_cols=110  Identities=17%  Similarity=0.132  Sum_probs=64.0

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcC--CeEEEeecCcchHHHHHHHh------CCceEEEEecCCCHHHHHHHHHHHHH
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENG--AKVVIADVQDKLGEDLADKL------GQDVCYIHCDISNEDEVINLVDTAVS   85 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G--~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (272)
                      +.+++.|.|+ |.+|..++..|+.+|  .+|++.+++++..+....++      .........|.   ++          
T Consensus         4 ~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~---~~----------   69 (146)
T d1ez4a1           4 NHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY---SD----------   69 (146)
T ss_dssp             TBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG---GG----------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH---HH----------
Confidence            3567888895 999999999999998  57999999887654333222      22233444442   21          


Q ss_pred             HhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEe
Q 024145           86 KFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTA  149 (272)
Q Consensus        86 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~is  149 (272)
                       ....|++|..+|....+        .+.-.+.++.|+.-...+.+.+.++   ...+.++++|
T Consensus        70 -~~~adivvitag~~~~~--------g~~r~~l~~~N~~i~~~~~~~i~~~---~p~aivivvt  121 (146)
T d1ez4a1          70 -CKDADLVVITAGAPQKP--------GESRLDLVNKNLNILSSIVKPVVDS---GFDGIFLVAA  121 (146)
T ss_dssp             -GTTCSEEEECCCC------------------CHHHHHHHHHHHHHHHHHT---TCCSEEEECS
T ss_pred             -hccccEEEEecccccCC--------CCCHHHHHHHHHHHHHHHHHHHhhc---CCCcEEEEeC
Confidence             23689999999865431        1222344556655444444444432   3456566554

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.45  E-value=0.0012  Score=47.93  Aligned_cols=115  Identities=15%  Similarity=0.181  Sum_probs=68.0

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCC--eEEEeecCcchHHHHHHHhCC-ceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           17 VAIITGGASGIGAMAVELFHENGA--KVVIADVQDKLGEDLADKLGQ-DVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      ++.|+||+|.+|.+++..|+.+|.  ++++.+.++...+. .+.... .+.....-+ ...+..+.+       .+.|++
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a-~Dl~~~~~~~~~~~~~-~~~~~~~~~-------~~aDiv   72 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVA-ADLSHIETRATVKGYL-GPEQLPDCL-------KGCDVV   72 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHH-HHHTTSSSSCEEEEEE-SGGGHHHHH-------TTCSEE
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhh-HHHhhhhhhcCCCeEE-cCCChHHHh-------CCCCEE
Confidence            689999999999999999999985  68999987654332 222211 111111111 122222212       278999


Q ss_pred             EeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecc
Q 024145           94 YNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASA  151 (272)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~  151 (272)
                      |..+|....+     ..+.   .+.++.|+.-.-.+.+.+.++   ...+.++.+|-.
T Consensus        73 Vitag~~~~~-----g~sR---~~ll~~N~~i~~~i~~~i~~~---~p~~iiivvtNP  119 (144)
T d1mlda1          73 VIPAGVPRKP-----GMTR---DDLFNTNATIVATLTAACAQH---CPDAMICIISNP  119 (144)
T ss_dssp             EECCSCCCCT-----TCCG---GGGHHHHHHHHHHHHHHHHHH---CTTSEEEECSSC
T ss_pred             EECCCcCCCC-----CCCc---chHHHHHHHHHHHHHHHHHhc---CCCeEEEEecCc
Confidence            9999964331     1121   234666766666666666554   245767776554

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.45  E-value=9.5e-05  Score=53.10  Aligned_cols=73  Identities=18%  Similarity=0.289  Sum_probs=55.6

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEe
Q 024145           16 KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYN   95 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~   95 (272)
                      |.++|.|+ |-+|+.+++.|.++|+.|++++.+++..+.+.+   .....+..|.++++.++++-      ..+.|.+|.
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~---~~~~~~~gd~~~~~~l~~a~------i~~a~~vi~   70 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYAS---YATHAVIANATEENELLSLG------IRNFEYVIV   70 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTT---TCSEEEECCTTCTTHHHHHT------GGGCSEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHH---hCCcceeeecccchhhhccC------CccccEEEE
Confidence            56788876 899999999999999999999999887665543   23466778999988776531      125788777


Q ss_pred             CCC
Q 024145           96 NAG   98 (272)
Q Consensus        96 ~ag   98 (272)
                      ..+
T Consensus        71 ~~~   73 (134)
T d2hmva1          71 AIG   73 (134)
T ss_dssp             CCC
T ss_pred             EcC
Confidence            664

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=97.34  E-value=8.5e-05  Score=49.98  Aligned_cols=75  Identities=23%  Similarity=0.270  Sum_probs=51.3

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   91 (272)
                      +++||+++|.|. |.-|+++++.|.++|++|++.+.+.....  .+.+.....+...+. +.+.    ++       .+|
T Consensus         2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~~~--~~~~~~~~~~~~~~~-~~~~----~~-------~~d   66 (93)
T d2jfga1           2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTPPG--LDKLPEAVERHTGSL-NDEW----LM-------AAD   66 (93)
T ss_dssp             CCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSCTT--GGGSCTTSCEEESBC-CHHH----HH-------HCS
T ss_pred             CcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCchh--HHHHhhccceeeccc-chhh----hc-------cCC
Confidence            689999999997 77899999999999999999987554221  122223333333332 2221    12       579


Q ss_pred             EEEeCCCCCC
Q 024145           92 IMYNNAGILD  101 (272)
Q Consensus        92 ~lv~~ag~~~  101 (272)
                      .+|...|+..
T Consensus        67 ~vi~SPGi~~   76 (93)
T d2jfga1          67 LIVASPGIAL   76 (93)
T ss_dssp             EEEECTTSCT
T ss_pred             EEEECCCCCC
Confidence            9999999743

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=97.31  E-value=0.00057  Score=50.91  Aligned_cols=74  Identities=28%  Similarity=0.445  Sum_probs=54.8

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      .|.+++|.|+ |++|...++.+...|++++++++++++. +..++++....   +|..+.+...       ....++|++
T Consensus        30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~-~~a~~lGad~~---i~~~~~~~~~-------~~~~~~D~v   97 (168)
T d1uufa2          30 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKR-EAAKALGADEV---VNSRNADEMA-------AHLKSFDFI   97 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGH-HHHHHHTCSEE---EETTCHHHHH-------TTTTCEEEE
T ss_pred             CCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHH-HHHhccCCcEE---EECchhhHHH-------HhcCCCcee
Confidence            6789999986 9999998888888899999999888765 45567775432   3555554432       122479999


Q ss_pred             EeCCCC
Q 024145           94 YNNAGI   99 (272)
Q Consensus        94 v~~ag~   99 (272)
                      |.+.|.
T Consensus        98 id~~g~  103 (168)
T d1uufa2          98 LNTVAA  103 (168)
T ss_dssp             EECCSS
T ss_pred             eeeeec
Confidence            999985

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.30  E-value=0.00033  Score=52.27  Aligned_cols=80  Identities=21%  Similarity=0.348  Sum_probs=54.3

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDI   92 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   92 (272)
                      .|.+++|+|++|++|...+..+...|+ +|+++++++++.+ +.++++... ++  |-.+.+..++..+..  .-+.+|+
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~-~~~~~Ga~~-~i--~~~~~~~~~~~~~~~--~~~~~d~  100 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVE-AAKRAGADY-VI--NASMQDPLAEIRRIT--ESKGVDA  100 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHH-HHHHHTCSE-EE--ETTTSCHHHHHHHHT--TTSCEEE
T ss_pred             CCCEEEEEeccccceeeeeecccccccccccccccchhhHH-HHHHcCCce-ee--ccCCcCHHHHHHHHh--hcccchh
Confidence            567999999999999999999988885 7888888876654 445566542 22  334433333332221  1135999


Q ss_pred             EEeCCCC
Q 024145           93 MYNNAGI   99 (272)
Q Consensus        93 lv~~ag~   99 (272)
                      +|.++|.
T Consensus       101 vid~~g~  107 (170)
T d1jvba2         101 VIDLNNS  107 (170)
T ss_dssp             EEESCCC
T ss_pred             hhccccc
Confidence            9999874

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.29  E-value=0.00024  Score=53.14  Aligned_cols=68  Identities=26%  Similarity=0.343  Sum_probs=51.9

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDI   92 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   92 (272)
                      ++|+++|.|+ ||.+++++..|.+.|+ +|.++.|+.++.+.+.+..+..  .  .+-..              ....|+
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~~--~--~~~~~--------------~~~~Dl   76 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYA--Y--INSLE--------------NQQADI   76 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCE--E--ESCCT--------------TCCCSE
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhhh--h--hhccc--------------ccchhh
Confidence            6788999986 9999999999999997 6999999999888887776532  1  11111              125799


Q ss_pred             EEeCCCCC
Q 024145           93 MYNNAGIL  100 (272)
Q Consensus        93 lv~~ag~~  100 (272)
                      +||+....
T Consensus        77 iINaTpiG   84 (167)
T d1npya1          77 LVNVTSIG   84 (167)
T ss_dssp             EEECSSTT
T ss_pred             heeccccC
Confidence            99987653

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=97.27  E-value=0.0019  Score=47.38  Aligned_cols=112  Identities=14%  Similarity=0.040  Sum_probs=61.3

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCC---------eEEEeecCcchHHHHHHHh----CCceEEEEecCCCHHHHHHHHHHH
Q 024145           17 VAIITGGASGIGAMAVELFHENGA---------KVVIADVQDKLGEDLADKL----GQDVCYIHCDISNEDEVINLVDTA   83 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~---------~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~   83 (272)
                      ++.|+||+|.+|.+++..|++.+.         +++...++.+..+.....+    ......+...-.+.++        
T Consensus         6 KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------   77 (154)
T d1y7ta1           6 RVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKVA--------   77 (154)
T ss_dssp             EEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHH--------
T ss_pred             EEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccCCchhhh--------
Confidence            899999999999999999998753         1222333333333333222    1223333333222222        


Q ss_pred             HHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEe
Q 024145           84 VSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTA  149 (272)
Q Consensus        84 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~is  149 (272)
                         +...|++|..+|....     ...+.   .+.++.|+.-.-.+.+.+..+-  .+.+.|+.+|
T Consensus        78 ---~~~advViitaG~~~~-----pg~~r---~dl~~~N~~i~~~~~~~i~k~a--~~~~~vivvs  130 (154)
T d1y7ta1          78 ---FKDADYALLVGAAPRK-----AGMER---RDLLQVNGKIFTEQGRALAEVA--KKDVKVLVVG  130 (154)
T ss_dssp             ---TTTCSEEEECCCCCCC-----TTCCH---HHHHHHHHHHHHHHHHHHHHHS--CTTCEEEECS
T ss_pred             ---cccccEEEeecCcCCC-----CCCcH---HHHHHHHHHHHHHHHHHHHHhC--CCCcEEEEec
Confidence               2378999999997543     22333   3345556555545444444322  1245555554

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=97.25  E-value=0.00049  Score=51.67  Aligned_cols=77  Identities=21%  Similarity=0.295  Sum_probs=51.2

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeE-EEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHh-CCcc
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKV-VIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKF-GKLD   91 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V-~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~id   91 (272)
                      .|.+++|.|+ |++|...+..+...|+++ +++++++.+.+ ..++++.. +++  |..+.+.    .+++++.. +++|
T Consensus        28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~-~a~~~Ga~-~~i--~~~~~~~----~~~i~~~t~gg~D   98 (174)
T d1f8fa2          28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLE-LAKQLGAT-HVI--NSKTQDP----VAAIKEITDGGVN   98 (174)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHH-HHHHHTCS-EEE--ETTTSCH----HHHHHHHTTSCEE
T ss_pred             CCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHH-HHHHcCCe-EEE--eCCCcCH----HHHHHHHcCCCCc
Confidence            5789999997 899999998888889865 55566665554 44566643 233  4444322    23333322 4799


Q ss_pred             EEEeCCCC
Q 024145           92 IMYNNAGI   99 (272)
Q Consensus        92 ~lv~~ag~   99 (272)
                      ++|.+.|.
T Consensus        99 ~vid~~G~  106 (174)
T d1f8fa2          99 FALESTGS  106 (174)
T ss_dssp             EEEECSCC
T ss_pred             EEEEcCCc
Confidence            99999984

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=97.20  E-value=0.00018  Score=53.87  Aligned_cols=76  Identities=20%  Similarity=0.346  Sum_probs=52.0

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHH--hCCcc
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSK--FGKLD   91 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~--~g~id   91 (272)
                      .+.+|||+||+||+|.+.++-....|++|+.+.+++++.+.+ ++++......      .++   ...+....  .+++|
T Consensus        23 ~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~-~~lGad~vi~------~~~---~~~~~~~~~~~~gvd   92 (167)
T d1tt7a2          23 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYL-KQLGASEVIS------RED---VYDGTLKALSKQQWQ   92 (167)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHH-HHHTCSEEEE------HHH---HCSSCCCSSCCCCEE
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHH-HhhcccceEe------ccc---hhchhhhcccCCCce
Confidence            466899999999999998877777899999999988776544 5566543321      111   11111111  24699


Q ss_pred             EEEeCCCC
Q 024145           92 IMYNNAGI   99 (272)
Q Consensus        92 ~lv~~ag~   99 (272)
                      +++.+.|.
T Consensus        93 ~vid~vgg  100 (167)
T d1tt7a2          93 GAVDPVGG  100 (167)
T ss_dssp             EEEESCCT
T ss_pred             EEEecCcH
Confidence            99999873

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.15  E-value=0.0015  Score=48.60  Aligned_cols=76  Identities=26%  Similarity=0.323  Sum_probs=53.2

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      .|.+++|.|+ |++|...++.+...|++|+++++++++.+. .++++....+...+-.+   +      .++..+.+|.+
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~-a~~lGa~~~i~~~~~~~---~------~~~~~~~~d~v   95 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKRED-AMKMGADHYIATLEEGD---W------GEKYFDTFDLI   95 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHH-HHHHTCSEEEEGGGTSC---H------HHHSCSCEEEE
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHH-hhccCCcEEeeccchHH---H------HHhhhcccceE
Confidence            6789999987 899999888777889999999998887654 45677553332222221   1      11223578999


Q ss_pred             EeCCCCC
Q 024145           94 YNNAGIL  100 (272)
Q Consensus        94 v~~ag~~  100 (272)
                      +.+.+..
T Consensus        96 i~~~~~~  102 (168)
T d1piwa2          96 VVCASSL  102 (168)
T ss_dssp             EECCSCS
T ss_pred             EEEecCC
Confidence            9988753

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.14  E-value=0.00032  Score=53.01  Aligned_cols=48  Identities=29%  Similarity=0.487  Sum_probs=39.6

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCc
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQD   62 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~   62 (272)
                      +++++||+||+||+|...++-....|++|+.++|++++.+. .++++..
T Consensus        31 ~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~-~~~lGad   78 (177)
T d1o89a2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEY-LKSLGAS   78 (177)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHH-HHHHTEE
T ss_pred             CCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHH-HHhhccc
Confidence            44589999999999999888888889999999998887654 4566654

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=97.14  E-value=0.0014  Score=49.16  Aligned_cols=80  Identities=16%  Similarity=0.265  Sum_probs=55.4

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDI   92 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   92 (272)
                      .|.+++|+|+ ||+|...+..+...|+ +|+++++++++++ +.++++....+-.-|-.+.  .+...+..  ..+++|+
T Consensus        29 ~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~-~Ak~~GA~~~in~~~~~~~--~~~~~~~~--~g~G~d~  102 (176)
T d1d1ta2          29 PGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFE-KAMAVGATECISPKDSTKP--ISEVLSEM--TGNNVGY  102 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHH-HHHHHTCSEEECGGGCSSC--HHHHHHHH--HTSCCCE
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHH-HHHhcCCcEEECccccchH--HHHHHHHh--ccccceE
Confidence            6789999986 9999999999999995 7999999988876 5566776543332332221  11111111  2246999


Q ss_pred             EEeCCCC
Q 024145           93 MYNNAGI   99 (272)
Q Consensus        93 lv~~ag~   99 (272)
                      +|.+.|.
T Consensus       103 vi~~~g~  109 (176)
T d1d1ta2         103 TFEVIGH  109 (176)
T ss_dssp             EEECSCC
T ss_pred             EEEeCCc
Confidence            9999984

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=97.08  E-value=0.00039  Score=52.29  Aligned_cols=77  Identities=17%  Similarity=0.156  Sum_probs=52.8

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHh--CCc
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKF--GKL   90 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g~i   90 (272)
                      .|.+++|.|+ |++|...++.+...|+ +|+++++++++.+ ..++++... +  +|..+.+..    +++.+..  ..+
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~-~a~~lGa~~-~--i~~~~~~~~----~~v~~~t~g~G~   97 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVE-AAKFYGATD-I--LNYKNGHIE----DQVMKLTNGKGV   97 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHH-HHHHHTCSE-E--ECGGGSCHH----HHHHHHTTTSCE
T ss_pred             CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHH-HHHhhCccc-c--ccccchhHH----HHHHHHhhccCc
Confidence            5778999986 8999999888888898 6899999877654 445676432 2  244332222    2333332  249


Q ss_pred             cEEEeCCCC
Q 024145           91 DIMYNNAGI   99 (272)
Q Consensus        91 d~lv~~ag~   99 (272)
                      |++|.++|.
T Consensus        98 D~vid~~g~  106 (174)
T d1jqba2          98 DRVIMAGGG  106 (174)
T ss_dssp             EEEEECSSC
T ss_pred             ceEEEccCC
Confidence            999999984

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=97.08  E-value=0.0087  Score=43.65  Aligned_cols=119  Identities=17%  Similarity=0.079  Sum_probs=67.5

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHHHHHHHh-------CCceEEEEecCCCHHHHHHHHHHHHH
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGEDLADKL-------GQDVCYIHCDISNEDEVINLVDTAVS   85 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (272)
                      +.+++.|.|+ |.+|..++..|+..+. ++++.+.+++..+.....+       +.......  -.+.++          
T Consensus         6 k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~--~~~~~~----------   72 (154)
T d1pzga1           6 RRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA--EYSYEA----------   72 (154)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE--ECSHHH----------
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEec--cCchhh----------
Confidence            5578888897 9999999999998884 7999998877654443322       11111111  112211          


Q ss_pred             HhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecc
Q 024145           86 KFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASA  151 (272)
Q Consensus        86 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~  151 (272)
                      ....-|++|..+|....+..+-.+.+-   .+.+..|..-...+++.+.++   ...+.++.+|-.
T Consensus        73 ~~~~adiVvitag~~~~~g~~~~~~tR---~~l~~~n~~iv~~i~~~i~~~---~p~aiviivsNP  132 (154)
T d1pzga1          73 ALTGADCVIVTAGLTKVPGKPDSEWSR---NDLLPFNSKIIREIGQNIKKY---CPKTFIIVVTNP  132 (154)
T ss_dssp             HHTTCSEEEECCSCSSCTTCCGGGCCG---GGGHHHHHHHHHHHHHHHHHH---CTTCEEEECCSS
T ss_pred             hhcCCCeEEEecccccCCCCCCcccch---hhhhhhhHHHHHHHHHHHHhc---CCCcEEEEeCCc
Confidence            112689999999976542111111222   223445555555555544433   245666666543

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.06  E-value=0.0063  Score=43.94  Aligned_cols=101  Identities=18%  Similarity=0.177  Sum_probs=60.1

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcC--CeEEEeecCcch--HH----HHHHHh---CCceEEEEecCCCHHHHHHHHHHHHH
Q 024145           17 VAIITGGASGIGAMAVELFHENG--AKVVIADVQDKL--GE----DLADKL---GQDVCYIHCDISNEDEVINLVDTAVS   85 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G--~~V~~~~r~~~~--~~----~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (272)
                      ++.|+||+|.+|.+++..|+.+|  .+++++++++..  .+    ++.+..   .........--.+.++          
T Consensus         2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~~~----------   71 (145)
T d1hyea1           2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRI----------   71 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGG----------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcchHHH----------
Confidence            58999999999999999999998  379999987532  22    222211   1122221111112211          


Q ss_pred             HhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHh
Q 024145           86 KFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARV  136 (272)
Q Consensus        86 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  136 (272)
                       ...-|++|..||....+     ..+-   .+.++.|..-.-.+.+.+.++
T Consensus        72 -l~~aDvVVitAG~~~~~-----g~sR---~dl~~~Na~iv~~i~~~i~~~  113 (145)
T d1hyea1          72 -IDESDVVIITSGVPRKE-----GMSR---MDLAKTNAKIVGKYAKKIAEI  113 (145)
T ss_dssp             -GTTCSEEEECCSCCCCT-----TCCH---HHHHHHHHHHHHHHHHHHHHH
T ss_pred             -hccceEEEEecccccCC-----CCCh---hhhhhhhHHHHHHHHHHHhcc
Confidence             23689999999974331     1232   245566766655555555544

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=97.01  E-value=0.00084  Score=50.18  Aligned_cols=80  Identities=19%  Similarity=0.281  Sum_probs=51.9

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCe-EEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAK-VVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDI   92 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   92 (272)
                      .|.+++|.|+ ||+|...++.+...|+. |+.+++++++. ++.++++....+..-|-  .+.+++.+...  ..+++|+
T Consensus        28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~-~~ak~lGa~~~i~~~~~--~~~~~~~~~~~--~~~g~D~  101 (176)
T d2fzwa2          28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKF-ARAKEFGATECINPQDF--SKPIQEVLIEM--TDGGVDY  101 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGH-HHHHHHTCSEEECGGGC--SSCHHHHHHHH--TTSCBSE
T ss_pred             CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHH-HHHHHhCCcEEEeCCch--hhHHHHHHHHH--cCCCCcE
Confidence            6789999998 59999999999999975 66666766654 45667775433222221  12233222222  1246999


Q ss_pred             EEeCCCC
Q 024145           93 MYNNAGI   99 (272)
Q Consensus        93 lv~~ag~   99 (272)
                      +|.+.|.
T Consensus       102 vid~~G~  108 (176)
T d2fzwa2         102 SFECIGN  108 (176)
T ss_dssp             EEECSCC
T ss_pred             eeecCCC
Confidence            9999983

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=97.01  E-value=0.014  Score=42.78  Aligned_cols=115  Identities=10%  Similarity=0.085  Sum_probs=67.3

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCC--eEEEeecCcchHHHHHHHh-------CCceEEEEecCCCHHHHHHHHH
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGA--KVVIADVQDKLGEDLADKL-------GQDVCYIHCDISNEDEVINLVD   81 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~   81 (272)
                      ..+..+++.|.|+ |.+|.+++..|+.+|.  ++++.+++++..+.....+       +... .+..  .+.++      
T Consensus        16 ~~~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~-~~~~--~d~~~------   85 (160)
T d1i0za1          16 ATVPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPK-IVAD--KDYSV------   85 (160)
T ss_dssp             CCCCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSE-EEEC--SSGGG------
T ss_pred             ccCCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCe-EEec--cchhh------
Confidence            3355678888896 9999999999999985  7999999876654333222       1122 2222  22222      


Q ss_pred             HHHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecc
Q 024145           82 TAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASA  151 (272)
Q Consensus        82 ~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~  151 (272)
                           ...-|++|..||....+ +    .+.   .+.++.|+.-.-.+.+.+.+.   ...+.++++|-.
T Consensus        86 -----~~~adiVVitAg~~~~~-g----~tR---~~l~~~N~~i~~~i~~~i~~~---~p~aiiivvtNP  139 (160)
T d1i0za1          86 -----TANSKIVVVTAGVRQQE-G----ESR---LNLVQRNVNVFKFIIPQIVKY---SPDCIIIVVSNP  139 (160)
T ss_dssp             -----GTTCSEEEECCSCCCCT-T----CCG---GGGHHHHHHHHHHHHHHHHHH---CTTCEEEECSSS
T ss_pred             -----cccccEEEEecCCcccc-C----cch---HHHHHHHHHHHHHHHHHHHhc---CCCcEEEEeCCc
Confidence                 22689999999975431 1    121   133444554443333333332   345667766543

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.99  E-value=0.0037  Score=45.27  Aligned_cols=113  Identities=19%  Similarity=0.186  Sum_probs=64.3

Q ss_pred             EEEEeCCCChHHHHHHHHHHHc-C--CeEEEeecCcchHHHHHHHhC--CceE-EEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           17 VAIITGGASGIGAMAVELFHEN-G--AKVVIADVQDKLGEDLADKLG--QDVC-YIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~-G--~~V~~~~r~~~~~~~~~~~~~--~~~~-~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      ++.|+|++|.+|.+++..|+.+ +  .++++.+..+....+..+-..  .... ....+-.+.+++           ..-
T Consensus         2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~~~g~a~Dl~h~~~~~~~~~~~~~~~~~~~-----------~~a   70 (145)
T d2cmda1           2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATPAL-----------EGA   70 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTTHHHHHHHHHTSCSSCEEEEECSSCCHHHH-----------TTC
T ss_pred             EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccccchhHHHHHHCCccccCCcEEEcCCCcccc-----------CCC
Confidence            6789999999999999988643 4  679999976543222222211  1111 111223333332           167


Q ss_pred             cEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecc
Q 024145           91 DIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASA  151 (272)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~  151 (272)
                      |++|..+|....+ +    .+-   .+.++.|..-.-.+.+.+.++-   +.+.++.+|..
T Consensus        71 DvvvitaG~~~k~-g----~~R---~dl~~~N~~i~~~v~~~i~~~~---p~aivivvtNP  120 (145)
T d2cmda1          71 DVVLISAGVRRKP-G----MDR---SDLFNVNAGIVKNLVQQVAKTC---PKACIGIITNP  120 (145)
T ss_dssp             SEEEECCSCCCCT-T----CCG---GGGHHHHHHHHHHHHHHHHHHC---TTSEEEECSSS
T ss_pred             CEEEECCCccCCC-C----cch---hhHHHHHHHHHHHHHHHHHhhC---CCcEEEEccCC
Confidence            9999999975431 1    122   2335666555555555554432   45666666554

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=96.94  E-value=0.004  Score=45.08  Aligned_cols=71  Identities=13%  Similarity=0.122  Sum_probs=47.9

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCC--eEEEeecCcchHHHHHHHh-------CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024145           16 KVAIITGGASGIGAMAVELFHENGA--KVVIADVQDKLGEDLADKL-------GQDVCYIHCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (272)
                      |++.|+|+ |.+|.+++..|+.+|.  ++++.+.++++.+....++       +........   +.+++          
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~---d~~~l----------   67 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIN---DWAAL----------   67 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEES---CGGGG----------
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceecc---CHHHh----------
Confidence            67888895 9999999999999883  7999999877654333222       122233322   22221          


Q ss_pred             hCCccEEEeCCCCCC
Q 024145           87 FGKLDIMYNNAGILD  101 (272)
Q Consensus        87 ~g~id~lv~~ag~~~  101 (272)
                       .+-|++|..+|...
T Consensus        68 -~~adiVVitaG~~~   81 (146)
T d1hyha1          68 -ADADVVISTLGNIK   81 (146)
T ss_dssp             -TTCSEEEECCSCGG
T ss_pred             -ccccEEEEeccccc
Confidence             26899999999654

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.94  E-value=0.002  Score=47.54  Aligned_cols=76  Identities=28%  Similarity=0.320  Sum_probs=51.4

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      .|.+++|.|+ |++|...+..+...|++|+++++++++.+. .++++....   .|..+.+..+.    +.+..++.|..
T Consensus        27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~-a~~~Ga~~~---i~~~~~~~~~~----~~~~~~g~~~~   97 (166)
T d1llua2          27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLEL-ARKLGASLT---VNARQEDPVEA----IQRDIGGAHGV   97 (166)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHTTCSEE---EETTTSCHHHH----HHHHHSSEEEE
T ss_pred             CCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHh-hhccCcccc---ccccchhHHHH----HHHhhcCCccc
Confidence            5789999886 999999998888889999999998877654 456665322   24444443333    33333456666


Q ss_pred             EeCCC
Q 024145           94 YNNAG   98 (272)
Q Consensus        94 v~~ag   98 (272)
                      |.+++
T Consensus        98 i~~~~  102 (166)
T d1llua2          98 LVTAV  102 (166)
T ss_dssp             EECCS
T ss_pred             ccccc
Confidence            66554

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.86  E-value=0.0045  Score=42.61  Aligned_cols=40  Identities=23%  Similarity=0.431  Sum_probs=34.5

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcc
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDK   50 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~   50 (272)
                      +.+++||++||.|+ |.+|..-++.|++.|++|++++....
T Consensus         7 ~l~l~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~   46 (113)
T d1pjqa1           7 FCQLRDRDCLIVGG-GDVAERKARLLLEAGARLTVNALTFI   46 (113)
T ss_dssp             EECCBTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCC
T ss_pred             EEEeCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCC
Confidence            46899999999995 56999999999999999988876544

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=96.85  E-value=0.0029  Score=46.09  Aligned_cols=75  Identities=12%  Similarity=0.106  Sum_probs=58.0

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHH-hCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEe
Q 024145           17 VAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADK-LGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYN   95 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~   95 (272)
                      .++|.|. |.+|+.+++.|.++|.+|+++..+++...+..++ ....+.++..|.++++.++++--      .+.|.+|.
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~~~vi~Gd~~d~~~L~~a~i------~~a~~vi~   77 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGI------DRCRAILA   77 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTT------TTCSEEEE
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCCcEEEEccCcchHHHHHhcc------ccCCEEEE
Confidence            5788887 7999999999999999999999887765544443 35678999999999987655321      25788877


Q ss_pred             CCC
Q 024145           96 NAG   98 (272)
Q Consensus        96 ~ag   98 (272)
                      ..+
T Consensus        78 ~~~   80 (153)
T d1id1a_          78 LSD   80 (153)
T ss_dssp             CSS
T ss_pred             ccc
Confidence            663

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=96.83  E-value=0.0038  Score=46.50  Aligned_cols=80  Identities=18%  Similarity=0.307  Sum_probs=54.0

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDI   92 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   92 (272)
                      .|.+++|.|+ ||+|...+..+...|+ +|+++++++++.+ +.++.+....+...|-.  +.+++......  .+++|+
T Consensus        28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~-~a~~~Ga~~~i~~~~~~--~~~~~~~~~~~--~~G~D~  101 (176)
T d2jhfa2          28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFA-KAKEVGATECVNPQDYK--KPIQEVLTEMS--NGGVDF  101 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHH-HHHHTTCSEEECGGGCS--SCHHHHHHHHT--TSCBSE
T ss_pred             CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHH-HHHHhCCeeEEecCCch--hHHHHHHHHHh--cCCCCE
Confidence            6789999999 7899999999999985 7888888888765 44556544332222322  22233233222  247999


Q ss_pred             EEeCCCC
Q 024145           93 MYNNAGI   99 (272)
Q Consensus        93 lv~~ag~   99 (272)
                      +|.+.|.
T Consensus       102 vid~~G~  108 (176)
T d2jhfa2         102 SFEVIGR  108 (176)
T ss_dssp             EEECSCC
T ss_pred             EEecCCc
Confidence            9999984

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=96.80  E-value=0.0062  Score=43.83  Aligned_cols=108  Identities=16%  Similarity=0.141  Sum_probs=60.0

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCC--eEEEeecCcchHHHHHHHhCC------ceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145           17 VAIITGGASGIGAMAVELFHENGA--KVVIADVQDKLGEDLADKLGQ------DVCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~------~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      ++.|.|+ |.+|.+++..++.++.  ++++.+++++..+....++..      .......   +.+           ...
T Consensus         3 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~---~~~-----------~~~   67 (142)
T d1y6ja1           3 KVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAG---DYS-----------DVK   67 (142)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CGG-----------GGT
T ss_pred             eEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeC---cHH-----------HhC
Confidence            4566687 9999999999999974  799999888765444333321      2222111   111           233


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEec
Q 024145           89 KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTAS  150 (272)
Q Consensus        89 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss  150 (272)
                      .-|++|..+|....+     .   +.-.+.++.|..-...+.+.+.++   .+.+.++.+|-
T Consensus        68 ~adivvitag~~~~~-----~---~~r~~l~~~N~~i~~~i~~~i~~~---~p~ai~ivvtN  118 (142)
T d1y6ja1          68 DCDVIVVTAGANRKP-----G---ETRLDLAKKNVMIAKEVTQNIMKY---YNHGVILVVSN  118 (142)
T ss_dssp             TCSEEEECCCC--------------CHHHHHHHHHHHHHHHHHHHHHH---CCSCEEEECSS
T ss_pred             CCceEEEecccccCc-----C---cchhHHhhHHHHHHHHHHHHhhcc---CCCceEEEecC
Confidence            689999999965321     1   122345566665555554444432   34566666544

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=96.78  E-value=0.015  Score=41.59  Aligned_cols=109  Identities=17%  Similarity=0.175  Sum_probs=65.2

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcC--CeEEEeecCcchHHHHHHHh-------CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           17 VAIITGGASGIGAMAVELFHENG--AKVVIADVQDKLGEDLADKL-------GQDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G--~~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      ++.|+|+ |.+|.+++..|+.+|  .++++.+.+++..+.....+       .....+...+  +.++           .
T Consensus         2 KI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~~--~~~~-----------~   67 (142)
T d1guza1           2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSN--DYAD-----------T   67 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEES--CGGG-----------G
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEecC--CHHH-----------h
Confidence            4677796 999999999999998  47999999887654333222       2233333332  2222           2


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEec
Q 024145           88 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTAS  150 (272)
Q Consensus        88 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss  150 (272)
                      .+.|++|..+|....+ +    .+-   .+.++.|..-...+.+.+.++   .+.+.++++|-
T Consensus        68 ~dadvvvitag~~~~~-g----~~r---~~l~~~N~~i~~~i~~~i~~~---~p~aivivvtN  119 (142)
T d1guza1          68 ANSDIVIITAGLPRKP-G----MTR---EDLLMKNAGIVKEVTDNIMKH---SKNPIIIVVSN  119 (142)
T ss_dssp             TTCSEEEECCSCCCCT-T----CCH---HHHHHHHHHHHHHHHHHHHHH---CSSCEEEECCS
T ss_pred             cCCeEEEEEEecCCCC-C----Cch---HHHHHHHHHHHHHHHHHhhcc---CCCeEEEEecC
Confidence            3689999999975431 1    122   234555555555555554443   24565665543

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.78  E-value=0.011  Score=43.30  Aligned_cols=77  Identities=13%  Similarity=0.074  Sum_probs=50.3

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCC--eEEEeecCcchHHHHHHHh-------CCceEEEEecCCCHHHHHHHHH
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGA--KVVIADVQDKLGEDLADKL-------GQDVCYIHCDISNEDEVINLVD   81 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~   81 (272)
                      ..++..++.|.|+ |.+|..++..|+.+|.  ++++.+++++..+....++       +........|.   ++      
T Consensus        15 ~~~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~---~~------   84 (159)
T d2ldxa1          15 DKLSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDY---NV------   84 (159)
T ss_dssp             CCCCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSG---GG------
T ss_pred             ccCCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccch---hh------
Confidence            3445557888896 9999999999999974  7999998876654333222       11222222232   21      


Q ss_pred             HHHHHhCCccEEEeCCCCCCC
Q 024145           82 TAVSKFGKLDIMYNNAGILDR  102 (272)
Q Consensus        82 ~~~~~~g~id~lv~~ag~~~~  102 (272)
                           ...-|++|..+|....
T Consensus        85 -----~~~adivvitag~~~~  100 (159)
T d2ldxa1          85 -----SANSKLVIITAGARMV  100 (159)
T ss_dssp             -----GTTEEEEEECCSCCCC
T ss_pred             -----hccccEEEEecccccC
Confidence                 2368999999997544

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=96.77  E-value=0.0016  Score=48.92  Aligned_cols=113  Identities=12%  Similarity=-0.001  Sum_probs=60.5

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcC---C----eEEEeecCcc--hHHHHHHHh----CCceEEEEecCCCHHHHHHHHHH
Q 024145           16 KVAIITGGASGIGAMAVELFHENG---A----KVVIADVQDK--LGEDLADKL----GQDVCYIHCDISNEDEVINLVDT   82 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G---~----~V~~~~r~~~--~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~   82 (272)
                      -+|.||||+|.||.+++..|++..   .    .+.+.+....  .++...-++    ......+..- ++..        
T Consensus        25 ~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~~-~~~~--------   95 (175)
T d7mdha1          25 VNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIG-IDPY--------   95 (175)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEE-SCHH--------
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCcccc-ccch--------
Confidence            479999999999999999999853   2    3445554432  223222222    1112222211 2221        


Q ss_pred             HHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEe
Q 024145           83 AVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTA  149 (272)
Q Consensus        83 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~is  149 (272)
                        +.+.+.|++|..+|....     ...+.   .+.++.|..-.-.+.+.+.++-  .+..+|+.++
T Consensus        96 --~~~~~aDvVvi~ag~~rk-----pg~tR---~Dll~~N~~I~k~~~~~i~~~a--~~~~~vlvv~  150 (175)
T d7mdha1          96 --EVFEDVDWALLIGAKPRG-----PGMER---AALLDINGQIFADQGKALNAVA--SKNVKVLVVG  150 (175)
T ss_dssp             --HHTTTCSEEEECCCCCCC-----TTCCH---HHHHHHHHHHHHHHHHHHHHHS--CTTCEEEECS
T ss_pred             --hhccCCceEEEeeccCCC-----CCCcH---HHHHHHHHHHHHHHHHHHHhhC--CCCcEEEEec
Confidence              223479999999997543     12333   3455556554444444444332  1234455553

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=96.75  E-value=0.0045  Score=44.92  Aligned_cols=80  Identities=13%  Similarity=0.179  Sum_probs=52.6

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      +=|++.|.||.|.+|..+++.|.++|++|.+.+|+.....+.... ...+..+..+   ...+...+.++.....+=.++
T Consensus         8 ~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~~~-~~~~v~~~~~---~~~~~~v~~~~~~~~~~~~ii   83 (152)
T d2pv7a2           8 DIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESILA-NADVVIVSVP---INLTLETIERLKPYLTENMLL   83 (152)
T ss_dssp             TCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHHHT-TCSEEEECSC---GGGHHHHHHHHGGGCCTTSEE
T ss_pred             CCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchhhh-hccccccccc---hhhheeeeecccccccCCceE
Confidence            447899999999999999999999999999999987655433321 2334443333   344555556655543322344


Q ss_pred             EeCC
Q 024145           94 YNNA   97 (272)
Q Consensus        94 v~~a   97 (272)
                      +..+
T Consensus        84 iD~~   87 (152)
T d2pv7a2          84 ADLT   87 (152)
T ss_dssp             EECC
T ss_pred             EEec
Confidence            4444

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.74  E-value=0.0015  Score=48.91  Aligned_cols=43  Identities=16%  Similarity=0.214  Sum_probs=37.6

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHH
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADK   58 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~   58 (272)
                      .|++.|.|+ |.+|.+++..|+++|++|.+.+|+++..+...+.
T Consensus         1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~   43 (184)
T d1bg6a2           1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDR   43 (184)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHc
Confidence            478999997 9999999999999999999999998877766543

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.73  E-value=0.0026  Score=46.93  Aligned_cols=76  Identities=29%  Similarity=0.338  Sum_probs=50.1

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      .|.++||.|+ |++|...+..+...|++|+++++++++.+. .++++....   .|-.+.+.    .+.+.+.....|.+
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~-~k~~Ga~~~---~~~~~~~~----~~~~~~~~~~~~~~   97 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLEL-AKELGADLV---VNPLKEDA----AKFMKEKVGGVHAA   97 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHH-HHHTTCSEE---ECTTTSCH----HHHHHHHHSSEEEE
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhh-hhhcCccee---cccccchh----hhhcccccCCCceE
Confidence            5788999875 999999988888899999999998887654 455665432   23333222    12233333456666


Q ss_pred             EeCCC
Q 024145           94 YNNAG   98 (272)
Q Consensus        94 v~~ag   98 (272)
                      |.+++
T Consensus        98 v~~~~  102 (168)
T d1rjwa2          98 VVTAV  102 (168)
T ss_dssp             EESSC
T ss_pred             EeecC
Confidence            66665

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=96.71  E-value=0.0097  Score=42.73  Aligned_cols=109  Identities=20%  Similarity=0.281  Sum_probs=61.3

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHHHHHHHh-------CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           16 KVAIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGEDLADKL-------GQDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      |++.|.|+ |.+|.+++..|+.++. ++++.+.+++..+.....+       +....+...+  |.++           .
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~--d~~~-----------~   67 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTN--NYAD-----------T   67 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEES--CGGG-----------G
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecC--cHHH-----------h
Confidence            46677786 9999999999998874 8999998877654433322       2222222221  1111           1


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcC-CCCceEEEEec
Q 024145           88 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVP-QQKGCILFTAS  150 (272)
Q Consensus        88 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~g~iv~iss  150 (272)
                      ..-|++|..||....+ +       +.-.+.++.|+.    +++...+.+.+ .+.+.++.+|-
T Consensus        68 ~~advvvitag~~~~~-~-------~~r~dl~~~N~~----i~~~i~~~i~k~~p~aivivvtN  119 (142)
T d1uxja1          68 ANSDVIVVTSGAPRKP-G-------MSREDLIKVNAD----ITRACISQAAPLSPNAVIIMVNN  119 (142)
T ss_dssp             TTCSEEEECCSCC-----------------CHHHHHH----HHHHHHHHHGGGCTTCEEEECSS
T ss_pred             cCCCEEEEeeeccCCc-C-------cchhHHHhHHHH----HHHHHHHHHhccCCCceEEEeCC
Confidence            2679999999975431 1       122233455543    44455555544 34666665543

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=96.70  E-value=0.0026  Score=47.34  Aligned_cols=78  Identities=26%  Similarity=0.409  Sum_probs=50.2

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDI   92 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   92 (272)
                      .|.+++|.|+ |++|...+..+...|+ +|+.+++++++.+ ..++.+.. .++  |-.+ +.++...+...  ...+|+
T Consensus        32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~-~~~~~ga~-~~i--~~~~-~~~~~~~~~~~--~~g~d~  103 (172)
T d1h2ba2          32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLK-LAERLGAD-HVV--DARR-DPVKQVMELTR--GRGVNV  103 (172)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHH-HHHHTTCS-EEE--ETTS-CHHHHHHHHTT--TCCEEE
T ss_pred             CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHH-HHhhcccc-eee--cCcc-cHHHHHHHhhC--CCCceE
Confidence            5789999986 9999998888888886 5677777776554 44555543 223  3222 33333332211  135999


Q ss_pred             EEeCCCC
Q 024145           93 MYNNAGI   99 (272)
Q Consensus        93 lv~~ag~   99 (272)
                      +|.++|.
T Consensus       104 vid~~g~  110 (172)
T d1h2ba2         104 AMDFVGS  110 (172)
T ss_dssp             EEESSCC
T ss_pred             EEEecCc
Confidence            9999984

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.69  E-value=0.0078  Score=44.16  Aligned_cols=78  Identities=12%  Similarity=0.151  Sum_probs=52.7

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh-------------CCceEEEEecCCCHHHHHHHHHHH
Q 024145           17 VAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL-------------GQDVCYIHCDISNEDEVINLVDTA   83 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~~~~~~~~~~   83 (272)
                      ++.|.|. |-+|.++++.|.++|++|++.+|+++..+...+.-             ..++.++.   ..+++++++++++
T Consensus         2 kI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~DiIila---vp~~~~~~vl~~l   77 (165)
T d2f1ka2           2 KIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFLC---TPIQLILPTLEKL   77 (165)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGGTTCSEEEEC---SCHHHHHHHHHHH
T ss_pred             EEEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeeeeccccccccccccc---CcHhhhhhhhhhh
Confidence            3566664 99999999999999999999999987766544321             11233322   2467788888888


Q ss_pred             HHHhCCccEEEeCCC
Q 024145           84 VSKFGKLDIMYNNAG   98 (272)
Q Consensus        84 ~~~~g~id~lv~~ag   98 (272)
                      .....+=.+++...+
T Consensus        78 ~~~l~~~~iv~~~~s   92 (165)
T d2f1ka2          78 IPHLSPTAIVTDVAS   92 (165)
T ss_dssp             GGGSCTTCEEEECCS
T ss_pred             hhhcccccceeeccc
Confidence            765544445555443

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=96.68  E-value=0.014  Score=41.90  Aligned_cols=108  Identities=17%  Similarity=0.094  Sum_probs=63.3

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCC--eEEEeecCc--chHH----HHHHHh--CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024145           17 VAIITGGASGIGAMAVELFHENGA--KVVIADVQD--KLGE----DLADKL--GQDVCYIHCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~--~V~~~~r~~--~~~~----~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (272)
                      ++.|+||+|.+|.+++..++.+|.  ++++.+.+.  +..+    ++.+..  .........|.   ++           
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~---~~-----------   67 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGY---ED-----------   67 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCG---GG-----------
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCH---HH-----------
Confidence            688999999999999999999985  688888543  2222    222211  23344433332   22           


Q ss_pred             hCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCC-CCceEEEEec
Q 024145           87 FGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQ-QKGCILFTAS  150 (272)
Q Consensus        87 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~iss  150 (272)
                      ..+-|++|..||....+     ..+   -.+.++.|..=.-    ...+.+.+. ..+.++.+|-
T Consensus        68 ~~~aDiVvitaG~~~~~-----g~~---R~dl~~~N~~I~~----~i~~~i~~~~p~~i~ivvtN  120 (142)
T d1o6za1          68 TAGSDVVVITAGIPRQP-----GQT---RIDLAGDNAPIME----DIQSSLDEHNDDYISLTTSN  120 (142)
T ss_dssp             GTTCSEEEECCCCCCCT-----TCC---HHHHHHHHHHHHH----HHHHHHHTTCSCCEEEECCS
T ss_pred             hhhcCEEEEeccccccc-----CCc---hhhHHHHHHHHHH----HHHHHHHhcCCCceEEEecC
Confidence            22689999999964321     122   2345565655443    344444433 4566666643

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.60  E-value=0.0014  Score=49.21  Aligned_cols=47  Identities=21%  Similarity=0.339  Sum_probs=40.0

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL   59 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~   59 (272)
                      .+++||.+||.|+ ||.+++++.+|.+.| +|.++.|+.++.+++.+.+
T Consensus        14 ~~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~   60 (177)
T d1nvta1          14 GRVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEI   60 (177)
T ss_dssp             CCCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHH
Confidence            4589999999984 789999999998777 8999999998888776554

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=96.53  E-value=0.018  Score=41.73  Aligned_cols=116  Identities=15%  Similarity=0.144  Sum_probs=65.9

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHHHHHHHh-------CCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           16 KVAIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGEDLADKL-------GQDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      .++.|.|+ |++|.+++..|+.++. ++++.+++++..+.....+       +....+...|  +.+           ..
T Consensus         4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~~~-----------~~   69 (150)
T d1t2da1           4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--TYD-----------DL   69 (150)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--CGG-----------GG
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--ccc-----------cc
Confidence            46777795 9999999998888874 7999999887655443322       2233333332  121           12


Q ss_pred             CCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecc
Q 024145           88 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASA  151 (272)
Q Consensus        88 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~  151 (272)
                      ..-|++|..+|....+...-.+.+.   ...++.|..-...+.+.+..+   ...+.++++|-.
T Consensus        70 ~~advvvitag~~~~~g~~~~~~~R---~~l~~~N~~iv~~i~~~i~~~---~p~aivivvtNP  127 (150)
T d1t2da1          70 AGADVVIVTAGFTKAPGKSDKEWNR---DDLLPLNNKIMIEIGGHIKKN---CPNAFIIVVTNP  127 (150)
T ss_dssp             TTCSEEEECCSCSSCTTCCSTTCCG---GGGHHHHHHHHHHHHHHHHHH---CTTSEEEECSSS
T ss_pred             CCCcEEEEecccccCCCCCccccch---hHHHHHHHHHHHHHHHHHHhc---CCCeEEEEecCc
Confidence            3689999999975432111111111   223555555444444444433   245666666543

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=96.51  E-value=0.028  Score=40.23  Aligned_cols=109  Identities=12%  Similarity=0.114  Sum_probs=64.3

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCC--eEEEeecCcchHHHHHHHh------CCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145           17 VAIITGGASGIGAMAVELFHENGA--KVVIADVQDKLGEDLADKL------GQDVCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      ++.|.|+ |.+|.+++..++.+|.  ++++.+.+++..+.....+      .........+  +.+++           .
T Consensus         3 Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~--~~~~~-----------~   68 (143)
T d1llda1           3 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSD--DPEIC-----------R   68 (143)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEES--CGGGG-----------T
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCC--CHHHh-----------h
Confidence            5677796 9999999999999985  7999999887654332222      1122333222  12221           2


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEec
Q 024145           89 KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTAS  150 (272)
Q Consensus        89 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss  150 (272)
                      .-|++|..+|....     ...+.   .+.++.|..=.-.+.+.+.++   ...+.++.+|-
T Consensus        69 daDvVVitaG~~~~-----~g~~R---~dl~~~N~~i~~~i~~~i~~~---~p~ai~ivvtN  119 (143)
T d1llda1          69 DADMVVITAGPRQK-----PGQSR---LELVGATVNILKAIMPNLVKV---APNAIYMLITN  119 (143)
T ss_dssp             TCSEEEECCCCCCC-----TTCCH---HHHHHHHHHHHHHHHHHHHHH---CTTSEEEECCS
T ss_pred             CCcEEEEecccccC-----CCCch---hhhhhhhHHHHHHHHHHHHhh---CCCeEEEEeCC
Confidence            57999999996533     12222   235566665444444444433   24566666653

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=96.50  E-value=0.0091  Score=44.43  Aligned_cols=80  Identities=20%  Similarity=0.289  Sum_probs=53.0

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDI   92 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   92 (272)
                      .|.+|+|.|+ |+||...+..+...|+ +|+++++++++. ++.++++.... +...-.+ +..+......  ..+++|+
T Consensus        28 ~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~-~~a~~~Ga~~~-i~~~~~~-~~~~~~~~~~--~~~G~d~  101 (174)
T d1e3ia2          28 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKF-PKAKALGATDC-LNPRELD-KPVQDVITEL--TAGGVDY  101 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGH-HHHHHTTCSEE-ECGGGCS-SCHHHHHHHH--HTSCBSE
T ss_pred             CCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHH-HHHHHhCCCcc-cCCccch-hhhhhhHhhh--hcCCCcE
Confidence            6789999975 9999999999999998 577788877765 45666765432 2211111 1222222222  2357999


Q ss_pred             EEeCCCC
Q 024145           93 MYNNAGI   99 (272)
Q Consensus        93 lv~~ag~   99 (272)
                      +|.++|.
T Consensus       102 vie~~G~  108 (174)
T d1e3ia2         102 SLDCAGT  108 (174)
T ss_dssp             EEESSCC
T ss_pred             EEEeccc
Confidence            9999984

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.47  E-value=0.022  Score=40.70  Aligned_cols=107  Identities=19%  Similarity=0.207  Sum_probs=62.4

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcC--CeEEEeecCcchHHHHHHHh------CCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145           17 VAIITGGASGIGAMAVELFHENG--AKVVIADVQDKLGEDLADKL------GQDVCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G--~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      ++.|.|+ |.+|.+++..++.++  .++++.+.+++..+....++      .........|   .++           ..
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~---~~~-----------~~   66 (140)
T d1a5za1           2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD---YAD-----------LK   66 (140)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC---GGG-----------GT
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCc---HHH-----------hc
Confidence            4667796 999999999999987  47999999877654333222      1233333322   222           22


Q ss_pred             CccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcC-CCCceEEEEec
Q 024145           89 KLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVP-QQKGCILFTAS  150 (272)
Q Consensus        89 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~g~iv~iss  150 (272)
                      ..|++|..+|....+     ..+.   .+.+..|..=    ++...+.+.+ .+.+.++++|-
T Consensus        67 ~adivvitag~~~~~-----g~~r---~dl~~~N~~I----~~~i~~~i~~~~p~aivivvtN  117 (140)
T d1a5za1          67 GSDVVIVAAGVPQKP-----GETR---LQLLGRNARV----MKEIARNVSKYAPDSIVIVVTN  117 (140)
T ss_dssp             TCSEEEECCCCCCCS-----SCCH---HHHHHHHHHH----HHHHHHHHHHHCTTCEEEECSS
T ss_pred             CCCEEEEecccccCC-----Ccch---hhhhccccch----HHHHHHHHHhcCCCcEEEEeCC
Confidence            689999999975431     2222   2334445443    3334444433 35566666543

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=96.20  E-value=0.015  Score=43.22  Aligned_cols=79  Identities=20%  Similarity=0.289  Sum_probs=52.7

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHHHHHHHhCCceEEEEecCCCHHH-HHHHHHHHHHHhCCcc
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDE-VINLVDTAVSKFGKLD   91 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~~g~id   91 (272)
                      .|.+++|.|+ |++|...+..+...|+ +|+++++++++.+ +.++++....+   |..+.+. +++.....  ..+.+|
T Consensus        27 ~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~-~a~~lGa~~~i---~~~~~d~~~~~~~~~~--~~~G~d   99 (174)
T d1p0fa2          27 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFP-KAIELGATECL---NPKDYDKPIYEVICEK--TNGGVD   99 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHH-HHHHTTCSEEE---CGGGCSSCHHHHHHHH--TTSCBS
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHH-HHHHcCCcEEE---cCCCchhHHHHHHHHh--cCCCCc
Confidence            6789999986 9999999999999997 6888888887765 44567654332   2222111 12111111  224699


Q ss_pred             EEEeCCCC
Q 024145           92 IMYNNAGI   99 (272)
Q Consensus        92 ~lv~~ag~   99 (272)
                      ++|-+.|.
T Consensus       100 ~vid~~g~  107 (174)
T d1p0fa2         100 YAVECAGR  107 (174)
T ss_dssp             EEEECSCC
T ss_pred             EEEEcCCC
Confidence            99999874

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.05  E-value=0.097  Score=37.67  Aligned_cols=23  Identities=17%  Similarity=0.196  Sum_probs=21.2

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcC
Q 024145           17 VAIITGGASGIGAMAVELFHENG   39 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G   39 (272)
                      ++.|+||+|.+|.+++..|++.+
T Consensus         5 KV~IiGA~G~VG~~la~~l~~~~   27 (154)
T d5mdha1           5 RVLVTGAAGQIAYSLLYSIGNGS   27 (154)
T ss_dssp             EEEESSTTSHHHHTTHHHHHTTT
T ss_pred             EEEEECCCCHHHHHHHHHHHHHH
Confidence            89999999999999999998764

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.04  E-value=0.0054  Score=46.53  Aligned_cols=42  Identities=21%  Similarity=0.306  Sum_probs=36.1

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHH
Q 024145           16 KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADK   58 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~   58 (272)
                      |++.|.|+ |-+|..+|..++..|++|++.+++++.++...+.
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~   46 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKG   46 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhh
Confidence            68889997 8899999999999999999999998876655443

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=96.02  E-value=0.025  Score=38.68  Aligned_cols=71  Identities=11%  Similarity=0.121  Sum_probs=54.2

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      .+.++.|.| +|-+|+-++.+..+.|+++++.+.++....   ..+  .-.++..|..|.+.+.+++...     .+|++
T Consensus        10 ~~~kigIlG-gGQL~rMla~aA~~lG~~v~v~d~~~~~PA---~~v--a~~~i~~~~~d~~~l~~~~~~~-----~~Dvi   78 (111)
T d1kjqa2          10 AATRVMLLG-SGELGKEVAIECQRLGVEVIAVDRYADAPA---MHV--AHRSHVINMLDGDALRRVVELE-----KPHYI   78 (111)
T ss_dssp             TCCEEEEES-CSHHHHHHHHHHHTTTCEEEEEESSTTCGG---GGG--SSEEEECCTTCHHHHHHHHHHH-----CCSEE
T ss_pred             CCCEEEEEe-CCHHHHHHHHHHHHCCCEEEEEcCCCCCch---hhc--CCeEEECCCCCHHHHHHHHHhh-----CCceE
Confidence            456899999 789999999999999999999987765322   111  1256778999999988877654     68988


Q ss_pred             Ee
Q 024145           94 YN   95 (272)
Q Consensus        94 v~   95 (272)
                      -.
T Consensus        79 T~   80 (111)
T d1kjqa2          79 VP   80 (111)
T ss_dssp             EE
T ss_pred             EE
Confidence            43

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=95.94  E-value=0.0072  Score=45.91  Aligned_cols=80  Identities=15%  Similarity=0.165  Sum_probs=51.3

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDI   92 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   92 (272)
                      .|.+|+|.|+ |++|...+..+...|+ +|+++++++.+.+ +.++.+...   ..|-.+. ++.+.+.++- ....+|+
T Consensus        25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~-~a~~~Ga~~---~~~~~~~-~~~~~i~~~t-~g~g~D~   97 (195)
T d1kola2          25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLA-HAKAQGFEI---ADLSLDT-PLHEQIAALL-GEPEVDC   97 (195)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHH-HHHHTTCEE---EETTSSS-CHHHHHHHHH-SSSCEEE
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhH-hhhhccccE---EEeCCCc-CHHHHHHHHh-CCCCcEE
Confidence            5789999986 8999888887777787 6888888877664 445666432   1233332 2222222221 1236999


Q ss_pred             EEeCCCCC
Q 024145           93 MYNNAGIL  100 (272)
Q Consensus        93 lv~~ag~~  100 (272)
                      +|.+.|..
T Consensus        98 vid~vG~~  105 (195)
T d1kola2          98 AVDAVGFE  105 (195)
T ss_dssp             EEECCCTT
T ss_pred             EEECcccc
Confidence            99999853

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=95.93  E-value=0.019  Score=43.54  Aligned_cols=41  Identities=22%  Similarity=0.353  Sum_probs=35.8

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcch
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKL   51 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~   51 (272)
                      -.++.||++.|.| .|.||+.+++.+..-|++|+..++....
T Consensus        38 g~el~gk~vgIiG-~G~IG~~va~~l~~fg~~V~~~d~~~~~   78 (197)
T d1j4aa1          38 GREVRDQVVGVVG-TGHIGQVFMQIMEGFGAKVITYDIFRNP   78 (197)
T ss_dssp             BCCGGGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCH
T ss_pred             CccccCCeEEEec-ccccchhHHHhHhhhcccccccCccccc
Confidence            3568999999999 7899999999999999999998876543

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=95.91  E-value=0.026  Score=41.73  Aligned_cols=81  Identities=14%  Similarity=0.100  Sum_probs=58.9

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh------------------CCceEEEEecCCCHHHHHH
Q 024145           17 VAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL------------------GQDVCYIHCDISNEDEVIN   78 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~------------------~~~~~~~~~D~~~~~~~~~   78 (272)
                      .+-|.| -|-+|.+++++|+++|++|++.+|++++.+++.++-                  -.....+...+.+.+.+..
T Consensus         4 nIg~IG-lG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~ii~~~~~~~~v~~   82 (176)
T d2pgda2           4 DIALIG-LAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVDN   82 (176)
T ss_dssp             SEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHHH
T ss_pred             cEEEEe-EhHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhhcccceEEEecCchHHHHH
Confidence            456666 489999999999999999999999998887775431                  0123445556677788888


Q ss_pred             HHHHHHHHhCCccEEEeCCC
Q 024145           79 LVDTAVSKFGKLDIMYNNAG   98 (272)
Q Consensus        79 ~~~~~~~~~g~id~lv~~ag   98 (272)
                      ..+.+.....+=+++|...-
T Consensus        83 v~~~l~~~~~~g~iiid~sT  102 (176)
T d2pgda2          83 FIEKLVPLLDIGDIIIDGGN  102 (176)
T ss_dssp             HHHHHHHHCCTTCEEEECSC
T ss_pred             HHHHHHhccccCcEEEecCc
Confidence            88877776544566666653

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=95.80  E-value=0.022  Score=41.55  Aligned_cols=79  Identities=11%  Similarity=0.096  Sum_probs=53.4

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh----------CCceEEEEecCCCHHHHHHHH---HHHH
Q 024145           18 AIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL----------GQDVCYIHCDISNEDEVINLV---DTAV   84 (272)
Q Consensus        18 vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~~---~~~~   84 (272)
                      +-|.| .|-+|.++|++|+++|++|++.+|+++..+++.+.-          -.+..++-+=+.++++++.++   +.+.
T Consensus         3 IgiIG-lG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~d~ii~~v~~~~~v~~v~~~~~~~~   81 (161)
T d1vpda2           3 VGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGII   81 (161)
T ss_dssp             EEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCHH
T ss_pred             EEEEe-hhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhhcccHHHHHhCCCeEEEEcCCHHHHHHHHhCCcchh
Confidence            44555 699999999999999999999999988777665422          113444555567778877765   3344


Q ss_pred             HHhCCccEEEeCC
Q 024145           85 SKFGKLDIMYNNA   97 (272)
Q Consensus        85 ~~~g~id~lv~~a   97 (272)
                      ....+=+++|...
T Consensus        82 ~~~~~g~iiid~s   94 (161)
T d1vpda2          82 EGAKPGTVLIDMS   94 (161)
T ss_dssp             HHCCTTCEEEECS
T ss_pred             hccCCCCEEEECC
Confidence            4333335555554

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.71  E-value=0.0045  Score=44.87  Aligned_cols=37  Identities=19%  Similarity=0.408  Sum_probs=32.9

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecC
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQ   48 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~   48 (272)
                      .+++||++||.|| |.+|..-++.|++.|++|++++..
T Consensus         9 ~~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1           9 HQLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             ECCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             eeeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            4589999999998 679999999999999999888643

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=95.70  E-value=0.078  Score=37.71  Aligned_cols=107  Identities=16%  Similarity=0.113  Sum_probs=61.9

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCC--eEEEeecCcchHHHHHHHh-------CCceEEEEe-cCCCHHHHHHHHHHHHHH
Q 024145           17 VAIITGGASGIGAMAVELFHENGA--KVVIADVQDKLGEDLADKL-------GQDVCYIHC-DISNEDEVINLVDTAVSK   86 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~-D~~~~~~~~~~~~~~~~~   86 (272)
                      ++.|.|+ |.+|.+++..++.+|.  ++++++.+++..+.....+       +........ |.   ++           
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~---~~-----------   66 (142)
T d1ojua1           2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADY---SL-----------   66 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCG---GG-----------
T ss_pred             EEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCH---HH-----------
Confidence            5677796 9999999999999884  6999998887654322221       222333332 22   22           


Q ss_pred             hCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcC-CCCceEEEEec
Q 024145           87 FGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVP-QQKGCILFTAS  150 (272)
Q Consensus        87 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~g~iv~iss  150 (272)
                      ...-|++|..+|....+     ..+.   .+.+..|..-...    ..+.+.+ ...+.++.+|-
T Consensus        67 ~~~adiVvitag~~~~~-----g~~r---~~l~~~n~~i~~~----i~~~i~~~~p~aivivvtN  119 (142)
T d1ojua1          67 LKGSEIIVVTAGLARKP-----GMTR---LDLAHKNAGIIKD----IAKKIVENAPESKILVVTN  119 (142)
T ss_dssp             GTTCSEEEECCCCCCCS-----SCCH---HHHHHHHHHHHHH----HHHHHHTTSTTCEEEECSS
T ss_pred             hccccEEEEeccccCCC-----CCch---HHHHHHhhHHHHH----HHHHHHhhCCCcEEEEecC
Confidence            22689999999865431     1222   2334445443333    4444433 34566666544

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=95.68  E-value=0.044  Score=40.25  Aligned_cols=80  Identities=21%  Similarity=0.260  Sum_probs=50.3

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDI   92 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   92 (272)
                      .|.+++|.|+ ||+|...+..+...|. +|+.+++++++.+ ..++++....+-.-+-.+  ..++.....  ..+.+|+
T Consensus        28 ~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~-~a~~~GAd~~in~~~~~~--~~~~~~~~~--~~~G~d~  101 (175)
T d1cdoa2          28 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFE-KAKVFGATDFVNPNDHSE--PISQVLSKM--TNGGVDF  101 (175)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHH-HHHHTTCCEEECGGGCSS--CHHHHHHHH--HTSCBSE
T ss_pred             CCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHH-HHHHcCCcEEEcCCCcch--hHHHHHHhh--ccCCcce
Confidence            6689999985 7788888888888876 6888888887765 445676543222122211  112222221  1247999


Q ss_pred             EEeCCCC
Q 024145           93 MYNNAGI   99 (272)
Q Consensus        93 lv~~ag~   99 (272)
                      ++.+.|.
T Consensus       102 vid~~G~  108 (175)
T d1cdoa2         102 SLECVGN  108 (175)
T ss_dssp             EEECSCC
T ss_pred             eeeecCC
Confidence            9999984

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=95.63  E-value=0.086  Score=38.53  Aligned_cols=78  Identities=24%  Similarity=0.284  Sum_probs=59.5

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIM   93 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   93 (272)
                      ...+++|.|+ |-.|++.++.....|++|.+.+.+.+.++++....+..+.+..   .+.+.+++.+.       ..|++
T Consensus        31 ~pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~~~~~~---~~~~~l~~~~~-------~aDiv   99 (168)
T d1pjca1          31 KPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLY---SNSAEIETAVA-------EADLL   99 (168)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEE---CCHHHHHHHHH-------TCSEE
T ss_pred             CCcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcccceeeh---hhhhhHHHhhc-------cCcEE
Confidence            4568888884 6788998999999999999999999998888777766655543   45555554444       67999


Q ss_pred             EeCCCCCCC
Q 024145           94 YNNAGILDR  102 (272)
Q Consensus        94 v~~ag~~~~  102 (272)
                      |..+=+...
T Consensus       100 I~aalipG~  108 (168)
T d1pjca1         100 IGAVLVPGR  108 (168)
T ss_dssp             EECCCCTTS
T ss_pred             EEeeecCCc
Confidence            999876544

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=95.63  E-value=0.012  Score=44.94  Aligned_cols=44  Identities=23%  Similarity=0.413  Sum_probs=38.0

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHH
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDL   55 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~   55 (272)
                      .+++||+++|-| .|.+|..+++.|.+.|++|++.+.+.......
T Consensus        23 ~~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~   66 (201)
T d1c1da1          23 GSLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHA   66 (201)
T ss_dssp             CCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHHH
Confidence            469999999998 88899999999999999999998876655433

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.56  E-value=0.011  Score=43.85  Aligned_cols=84  Identities=19%  Similarity=0.152  Sum_probs=53.0

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh-CCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL-GQDVCYIHCDISNEDEVINLVDTAVSKFGK   89 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (272)
                      .+++||.++|.|-|.=+|+-++..|+++|++|..+..+....-...... -.....-.+.....+.++....       .
T Consensus        25 ~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~-------~   97 (171)
T d1edza1          25 NRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSL-------D   97 (171)
T ss_dssp             CTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHH-------H
T ss_pred             CCCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccccccccccccceeeeeeccccccccchhHHhhccc-------c
Confidence            4799999999999999999999999999999987765432100000000 0011111111234555555444       4


Q ss_pred             ccEEEeCCCCCC
Q 024145           90 LDIMYNNAGILD  101 (272)
Q Consensus        90 id~lv~~ag~~~  101 (272)
                      .|++|..+|...
T Consensus        98 aDIvIsavG~p~  109 (171)
T d1edza1          98 SDVVITGVPSEN  109 (171)
T ss_dssp             CSEEEECCCCTT
T ss_pred             CCEEEEccCCCc
Confidence            799999998643

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=95.45  E-value=0.1  Score=37.90  Aligned_cols=81  Identities=10%  Similarity=0.043  Sum_probs=53.2

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCC--eEEEeecCcchHHHHHHHhCC-------------ceEEEEecCCCHHHHHHHH
Q 024145           16 KVAIITGGASGIGAMAVELFHENGA--KVVIADVQDKLGEDLADKLGQ-------------DVCYIHCDISNEDEVINLV   80 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~-------------~~~~~~~D~~~~~~~~~~~   80 (272)
                      |+++|.| .|-+|.++++.|.+.|+  +|+..+++++..+...+.--.             ....+-+ ..-++.+..++
T Consensus         2 k~I~IIG-~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~dlIil-a~p~~~~~~vl   79 (171)
T d2g5ca2           2 QNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVML-SSPVRTFREIA   79 (171)
T ss_dssp             CEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEE-CSCHHHHHHHH
T ss_pred             CEEEEEc-cCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhhhhccccccccc-cCCchhhhhhh
Confidence            3588887 59999999999999996  688889988776655443100             1111111 13467788888


Q ss_pred             HHHHHHhCCccEEEeCCC
Q 024145           81 DTAVSKFGKLDIMYNNAG   98 (272)
Q Consensus        81 ~~~~~~~g~id~lv~~ag   98 (272)
                      +++......=.+++...+
T Consensus        80 ~~l~~~~~~~~ii~d~~s   97 (171)
T d2g5ca2          80 KKLSYILSEDATVTDQGS   97 (171)
T ss_dssp             HHHHHHSCTTCEEEECCS
T ss_pred             hhhhcccccccccccccc
Confidence            888776644445555554

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=95.41  E-value=0.031  Score=41.71  Aligned_cols=40  Identities=20%  Similarity=0.221  Sum_probs=34.8

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcc
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDK   50 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~   50 (272)
                      ...+.||++.|.|. |.||+.+++.+..-|++|+..+|.+.
T Consensus        37 ~~~l~gk~vgIiG~-G~IG~~va~~l~~~g~~v~~~d~~~~   76 (181)
T d1qp8a1          37 IPLIQGEKVAVLGL-GEIGTRVGKILAALGAQVRGFSRTPK   76 (181)
T ss_dssp             CCCCTTCEEEEESC-STHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             CCcccCceEEEecc-ccccccceeeeecccccccccccccc
Confidence            34589999999995 56999999999999999999988754

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=95.36  E-value=0.024  Score=44.06  Aligned_cols=50  Identities=22%  Similarity=0.357  Sum_probs=43.2

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCC
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQ   61 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~   61 (272)
                      .+++||+++|-| .|.+|..+++.|.+.|++|+.++-+...........+.
T Consensus        35 ~~l~g~~v~IqG-~GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~g~   84 (230)
T d1leha1          35 DSLEGLAVSVQG-LGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGA   84 (230)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCC
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhcCC
Confidence            468999999998 78999999999999999999999887777777666553

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=95.36  E-value=0.019  Score=42.18  Aligned_cols=42  Identities=14%  Similarity=0.058  Sum_probs=36.5

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchH
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLG   52 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~   52 (272)
                      .++.||.++|.|-|.-+|+-++..|.++|++|..+.+.....
T Consensus        33 i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~l   74 (166)
T d1b0aa1          33 IDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNL   74 (166)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCH
T ss_pred             cccccceEEEEeccccccHHHHHHHHHhhccccccccccchh
Confidence            358999999999999999999999999999998876655433

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=95.34  E-value=0.082  Score=38.87  Aligned_cols=75  Identities=16%  Similarity=0.121  Sum_probs=51.5

Q ss_pred             CCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCC---------------------ceEEEEecCCCHHHHHHHHH
Q 024145           23 GASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQ---------------------DVCYIHCDISNEDEVINLVD   81 (272)
Q Consensus        23 as~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~---------------------~~~~~~~D~~~~~~~~~~~~   81 (272)
                      |.|-+|.+++++|+++|++|.+.+|++++.+++.++-..                     ....+..-+.+...+...++
T Consensus         8 GlG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (178)
T d1pgja2           8 GLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGAATDSTIE   87 (178)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSHHHHHHHH
T ss_pred             eehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccccchhhhhhhhHHHHhcccceEEEEeecCcchhhhhhh
Confidence            588999999999999999999999999888877654321                     12233344445555666666


Q ss_pred             HHHHHhCCccEEEeCC
Q 024145           82 TAVSKFGKLDIMYNNA   97 (272)
Q Consensus        82 ~~~~~~g~id~lv~~a   97 (272)
                      .+...+..=++++...
T Consensus        88 ~~~~~~~~~~iii~~s  103 (178)
T d1pgja2          88 QLKKVFEKGDILVDTG  103 (178)
T ss_dssp             HHHHHCCTTCEEEECC
T ss_pred             hhhhhccccceecccC
Confidence            6655554445665544

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.31  E-value=0.017  Score=42.69  Aligned_cols=43  Identities=21%  Similarity=0.271  Sum_probs=37.9

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHH
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGE   53 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~   53 (272)
                      .++.||.++|.|-|.=+|+-++..|+++|++|..+........
T Consensus        35 i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~   77 (170)
T d1a4ia1          35 VPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLD   77 (170)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHH
T ss_pred             cccccceEEEEecCCccchHHHHHHHhccCceEEEecccccHH
Confidence            4689999999999999999999999999999998877665543

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=95.28  E-value=0.048  Score=40.96  Aligned_cols=41  Identities=17%  Similarity=0.110  Sum_probs=35.6

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcch
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKL   51 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~   51 (272)
                      ..+++||++.|.| -|.||+.+++.+..-|.+|+..++....
T Consensus        42 ~~~l~g~tvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~   82 (191)
T d1gdha1          42 GEKLDNKTLGIYG-FGSIGQALAKRAQGFDMDIDYFDTHRAS   82 (191)
T ss_dssp             BCCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSCCC
T ss_pred             cceecccceEEee-cccchHHHHHHHHhhccccccccccccc
Confidence            4678899999998 6899999999999999999998876554

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=95.26  E-value=0.023  Score=41.06  Aligned_cols=63  Identities=13%  Similarity=0.267  Sum_probs=46.8

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCC
Q 024145           18 AIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNA   97 (272)
Q Consensus        18 vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~a   97 (272)
                      +.|. |.|-+|.++++.|.+.|+++++..|+.++.+++.++.+..+.      .+.   +.+++       .-|++|.+.
T Consensus         3 Ig~I-G~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~g~~~~------~~~---~~~~~-------~~dvIilav   65 (152)
T d2ahra2           3 IGII-GVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYA------MSH---QDLID-------QVDLVILGI   65 (152)
T ss_dssp             EEEE-CCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBC------SSH---HHHHH-------TCSEEEECS
T ss_pred             EEEE-eccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhccccceeee------chh---hhhhh-------ccceeeeec
Confidence            3444 589999999999999999999999998888888777763321      232   22333       579999776

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=95.25  E-value=0.067  Score=40.41  Aligned_cols=38  Identities=34%  Similarity=0.476  Sum_probs=34.2

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCc
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQD   49 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~   49 (272)
                      .++.||++.|.| .|.||+.+++.|..-|++|+..++..
T Consensus        41 ~~l~~ktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~   78 (199)
T d1dxya1          41 KELGQQTVGVMG-TGHIGQVAIKLFKGFGAKVIAYDPYP   78 (199)
T ss_dssp             CCGGGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             ccccceeeeeee-cccccccccccccccceeeeccCCcc
Confidence            568999999999 78999999999999999999988754

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=95.25  E-value=0.036  Score=41.79  Aligned_cols=40  Identities=20%  Similarity=0.178  Sum_probs=35.3

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcc
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDK   50 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~   50 (272)
                      ..++.||++.|.| -|.||+.+++.+..-|++|+..++...
T Consensus        44 ~~eL~gktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~   83 (193)
T d1mx3a1          44 AARIRGETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYLS   83 (193)
T ss_dssp             CCCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSC
T ss_pred             ceeeeCceEEEec-cccccccceeeeeccccceeeccCccc
Confidence            4668999999997 789999999999999999999887543

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=95.23  E-value=0.0084  Score=45.14  Aligned_cols=81  Identities=12%  Similarity=0.187  Sum_probs=50.3

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCce-EEEEecCCCHHHHHHHHHHHH-----HHhCC
Q 024145           16 KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDV-CYIHCDISNEDEVINLVDTAV-----SKFGK   89 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~-----~~~g~   89 (272)
                      |++.|.|+ |-+|..+|..++..|++|++.+++++..+...+.+...+ ..+.-.....+..+...+.+.     +....
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~   83 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSYGDFGN   83 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEEESSSTTGGG
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhhhhhHHhhhcccccchhhhhhhhceeecccccccccc
Confidence            46888887 889999999999999999999999887665544321000 000112334555555544432     11234


Q ss_pred             ccEEEeCC
Q 024145           90 LDIMYNNA   97 (272)
Q Consensus        90 id~lv~~a   97 (272)
                      .|++|-+.
T Consensus        84 adlViEav   91 (186)
T d1wdka3          84 VDLVVEAV   91 (186)
T ss_dssp             CSEEEECC
T ss_pred             cceeeeee
Confidence            67777655

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=95.16  E-value=0.016  Score=40.59  Aligned_cols=70  Identities=11%  Similarity=0.191  Sum_probs=51.0

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEe
Q 024145           16 KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYN   95 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~   95 (272)
                      |.++|.| -|.+|+.+++.|  +|..|+++..+++..+...+   ..+.++..|.++++.++++      ...+.+.+|.
T Consensus         1 kHivI~G-~g~~g~~l~~~L--~~~~i~vi~~d~~~~~~~~~---~~~~~i~Gd~~~~~~L~~a------~i~~A~~vi~   68 (129)
T d2fy8a1           1 RHVVICG-WSESTLECLREL--RGSEVFVLAEDENVRKKVLR---SGANFVHGDPTRVSDLEKA------NVRGARAVIV   68 (129)
T ss_dssp             CCEEEES-CCHHHHHHHHTS--CGGGEEEEESCTTHHHHHHH---TTCEEEESCTTSHHHHHHT------TCTTCSEEEE
T ss_pred             CEEEEEC-CCHHHHHHHHHH--cCCCCEEEEcchHHHHHHHh---cCccccccccCCHHHHHHh------hhhcCcEEEE
Confidence            5678888 478999999998  45678888888777665533   3578899999999887652      1235777776


Q ss_pred             CC
Q 024145           96 NA   97 (272)
Q Consensus        96 ~a   97 (272)
                      ..
T Consensus        69 ~~   70 (129)
T d2fy8a1          69 NL   70 (129)
T ss_dssp             CC
T ss_pred             ec
Confidence            54

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.13  E-value=0.021  Score=41.77  Aligned_cols=39  Identities=26%  Similarity=0.494  Sum_probs=35.3

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcch
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKL   51 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~   51 (272)
                      .+.||+++|.| .|-||+.+|+.+...|++|+++..++..
T Consensus        21 ~l~Gk~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~dp~~   59 (163)
T d1li4a1          21 MIAGKVAVVAG-YGDVGKGCAQALRGFGARVIITEIDPIN   59 (163)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             eecCCEEEEec-cccccHHHHHHHHhCCCeeEeeecccch
Confidence            47999999998 7799999999999999999999987744

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.07  E-value=0.082  Score=38.34  Aligned_cols=81  Identities=11%  Similarity=0.060  Sum_probs=53.7

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh----------CCceEEEEecCCCHHHHHHHHHH---H
Q 024145           17 VAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL----------GQDVCYIHCDISNEDEVINLVDT---A   83 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~~~~---~   83 (272)
                      ++-|.| .|-+|.++|++|+++|++|.+.+|+++..+.+.+.-          -.....+..-+.+.+.++.++..   +
T Consensus         3 kIg~IG-lG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~diii~~v~~~~~~~~v~~~~~~~   81 (162)
T d3cuma2           3 QIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGL   81 (162)
T ss_dssp             EEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTSCSEEEECCSCHHHHHHHHHSTTCH
T ss_pred             EEEEEE-EHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhccccchhhhhccccCeeeecccchhhHHHHHhccccc
Confidence            355554 799999999999999999999999987766554321          12344555666777777776543   3


Q ss_pred             HHHhCCccEEEeCCC
Q 024145           84 VSKFGKLDIMYNNAG   98 (272)
Q Consensus        84 ~~~~g~id~lv~~ag   98 (272)
                      .....+=+++|...-
T Consensus        82 ~~~l~~g~iiid~st   96 (162)
T d3cuma2          82 LAHIAPGTLVLECST   96 (162)
T ss_dssp             HHHSCTTCEEEECSC
T ss_pred             cccCCCCCEEEECCC
Confidence            333333356655543

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=95.05  E-value=0.015  Score=42.39  Aligned_cols=35  Identities=11%  Similarity=0.036  Sum_probs=31.5

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchH
Q 024145           17 VAIITGGASGIGAMAVELFHENGAKVVIADVQDKLG   52 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~   52 (272)
                      +++|.|+ |.+|..++..|++.|++|.+++|++...
T Consensus         2 kI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~   36 (167)
T d1ks9a2           2 KITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPY   36 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSE
T ss_pred             EEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHh
Confidence            5888888 9999999999999999999999987643

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=94.96  E-value=0.078  Score=37.40  Aligned_cols=76  Identities=16%  Similarity=0.220  Sum_probs=52.3

Q ss_pred             EEEEeCCCChHHHHHHHHHHHc-CCeEEE-eecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEE
Q 024145           17 VAIITGGASGIGAMAVELFHEN-GAKVVI-ADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMY   94 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~-G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv   94 (272)
                      ++.|.|++|-.|+++++...+. +++++. +++... ...... .+..   +-.|++.|+.+...++...+.  ++-+|+
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~-~~~~~~-~~~D---vvIDFS~p~~~~~~~~~~~~~--~~~~Vi   73 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDP-LSLLTD-GNTE---VVIDFTHPDVVMGNLEFLIDN--GIHAVV   73 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCC-THHHHT-TTCS---EEEECCCTTTHHHHHHHHHHT--TCEEEE
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCc-hhhhcc-ccCC---EEEEcccHHHHHHHHHHHHhc--CCCEEE
Confidence            5789999999999999988775 567654 444332 222221 1222   567999999999988887765  566776


Q ss_pred             eCCCC
Q 024145           95 NNAGI   99 (272)
Q Consensus        95 ~~ag~   99 (272)
                      -..|.
T Consensus        74 GTTG~   78 (135)
T d1yl7a1          74 GTTGF   78 (135)
T ss_dssp             CCCCC
T ss_pred             ecccc
Confidence            55553

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=94.82  E-value=0.058  Score=40.24  Aligned_cols=41  Identities=24%  Similarity=0.199  Sum_probs=35.5

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcch
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKL   51 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~   51 (272)
                      ..++.||++.|.| .|.||+.+++.+..-|.+|+..++....
T Consensus        39 ~~~l~~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~~~   79 (184)
T d1ygya1          39 GTEIFGKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYVSP   79 (184)
T ss_dssp             BCCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCH
T ss_pred             cccccceeeeecc-ccchhHHHHHHhhhccceEEeecCCCCh
Confidence            4568999999999 7999999999999999999998876543

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=94.75  E-value=0.18  Score=37.46  Aligned_cols=40  Identities=28%  Similarity=0.208  Sum_probs=34.8

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcc
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDK   50 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~   50 (272)
                      ..++.++++.|.| .|.||+.+++.+..-|.+|+..++...
T Consensus        39 ~~~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~   78 (188)
T d1sc6a1          39 SFEARGKKLGIIG-YGHIGTQLGILAESLGMYVYFYDIENK   78 (188)
T ss_dssp             CCCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             cccccceEEEEee-cccchhhhhhhcccccceEeecccccc
Confidence            4568999999996 889999999999999999999887543

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=94.58  E-value=0.22  Score=36.37  Aligned_cols=45  Identities=13%  Similarity=0.135  Sum_probs=37.0

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL   59 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~   59 (272)
                      ...|++||..|++.|   ..+..|+++|++|+.++-++...+...+..
T Consensus        18 ~~~~~rvLd~GCG~G---~~a~~la~~G~~V~gvD~S~~~i~~a~~~~   62 (201)
T d1pjza_          18 VVPGARVLVPLCGKS---QDMSWLSGQGYHVVGAELSEAAVERYFTER   62 (201)
T ss_dssp             CCTTCEEEETTTCCS---HHHHHHHHHCCEEEEEEECHHHHHHHHHHH
T ss_pred             CCCCCEEEEecCcCC---HHHHHHHHcCCceEeecccHHHHHHHHHHh
Confidence            347889999999887   367789999999999999988877666554

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=94.51  E-value=0.04  Score=39.64  Aligned_cols=43  Identities=23%  Similarity=0.347  Sum_probs=36.1

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcC-CeEEEeecCcchHHHHHHHhC
Q 024145           17 VAIITGGASGIGAMAVELFHENG-AKVVIADVQDKLGEDLADKLG   60 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~~~   60 (272)
                      ++.+.|+ |.+|.++++.|++.| ++|++.+|+++..+.+.++.+
T Consensus         2 kI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~   45 (152)
T d1yqga2           2 NVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELG   45 (152)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTC
T ss_pred             EEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhcc
Confidence            3556665 999999999999888 889999999988888877765

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=94.20  E-value=0.047  Score=38.22  Aligned_cols=73  Identities=19%  Similarity=0.286  Sum_probs=53.3

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCeEEE-eecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEe
Q 024145           17 VAIITGGASGIGAMAVELFHENGAKVVI-ADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYN   95 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~   95 (272)
                      ++.|.|++|-.|+++++.+.++|++++. .+++...      .+. .. -+-.|.+.|+...+.++...+.  +.-+|+-
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~------~~~-~~-DVvIDFS~p~~~~~~l~~~~~~--~~p~ViG   71 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVE------ELD-SP-DVVIDFSSPEALPKTVDLCKKY--RAGLVLG   71 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEEE------ECS-CC-SEEEECSCGGGHHHHHHHHHHH--TCEEEEC
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcHH------Hhc-cC-CEEEEecCHHHHHHHHHHHHhc--CCCEEEE
Confidence            5899999999999999999999998764 3443221      111 11 1567999999999999988776  4567766


Q ss_pred             CCCC
Q 024145           96 NAGI   99 (272)
Q Consensus        96 ~ag~   99 (272)
                      ..|.
T Consensus        72 TTG~   75 (128)
T d1vm6a3          72 TTAL   75 (128)
T ss_dssp             CCSC
T ss_pred             cCCC
Confidence            6654

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=94.05  E-value=0.14  Score=39.69  Aligned_cols=36  Identities=22%  Similarity=0.483  Sum_probs=31.4

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecC
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQ   48 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~   48 (272)
                      ++++++|+|.| .||+|..++..|++.|. ++.+++.+
T Consensus        27 kL~~~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~D   63 (247)
T d1jw9b_          27 ALKDSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFD   63 (247)
T ss_dssp             HHHHCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred             HHhCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCc
Confidence            46788999999 78999999999999998 68888754

>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: CheY protein
species: Thermotoga maritima [TaxId: 2336]

Probab=94.00  E-value=0.26  Score=33.48  Aligned_cols=82  Identities=15%  Similarity=0.197  Sum_probs=56.0

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEE
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMY   94 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv   94 (272)
                      ||++||.--..-+-..+...|.+.|++|+.+..+....-+..++....+.++..++-+.+. -.++.++++....+-+++
T Consensus         1 GkrILivDD~~~~~~~l~~~L~~~g~~v~~~a~~~~~al~~~~~~~~dliilD~~mp~~~G-~e~~~~ir~~~~~~pvi~   79 (118)
T d1u0sy_           1 GKRVLIVDDAAFMRMMLKDIITKAGYEVAGEATNGREAVEKYKELKPDIVTMDITMPEMNG-IDAIKEIMKIDPNAKIIV   79 (118)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCCSEEEEECSCGGGCH-HHHHHHHHHHCTTCCEEE
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCHHHHHHHHHhccCCEEEEecCCCCCCH-HHHHHHHHHhCCCCcEEE
Confidence            7899999999999999999999999998866655544433444444445444444444433 345777777766777776


Q ss_pred             eCC
Q 024145           95 NNA   97 (272)
Q Consensus        95 ~~a   97 (272)
                      ..+
T Consensus        80 ls~   82 (118)
T d1u0sy_          80 CSA   82 (118)
T ss_dssp             EEC
T ss_pred             EEc
Confidence            653

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=94.00  E-value=0.18  Score=34.58  Aligned_cols=37  Identities=32%  Similarity=0.496  Sum_probs=31.6

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcc
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDK   50 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~   50 (272)
                      .++|+++|.| +|.+|..+|..|++.|.+|.++.+.+.
T Consensus        28 ~~~k~vvViG-gG~iG~E~A~~l~~~g~~Vtlie~~~~   64 (123)
T d1nhpa2          28 PEVNNVVVIG-SGYIGIEAAEAFAKAGKKVTVIDILDR   64 (123)
T ss_dssp             TTCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             cCCCEEEEEC-ChHHHHHHHHHhhccceEEEEEEecCc
Confidence            3567888886 679999999999999999999987654

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=93.87  E-value=1.2  Score=35.62  Aligned_cols=142  Identities=10%  Similarity=0.095  Sum_probs=77.2

Q ss_pred             CCcEEEEeCC-CChHHHHHHHHHHHcCC-eEEEeecCcchHHHHHHHh------CCceEEEEecCCCHHHHHHHHHHHHH
Q 024145           14 EGKVAIITGG-ASGIGAMAVELFHENGA-KVVIADVQDKLGEDLADKL------GQDVCYIHCDISNEDEVINLVDTAVS   85 (272)
Q Consensus        14 ~~k~vlItGa-s~giG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (272)
                      .|++||=..+ +|+++.+    +++.|+ +|+.++.++...+...+..      ..++.++..|+.      +.+....+
T Consensus       144 ~g~~VLdlf~~~G~~sl~----aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~------~~l~~~~~  213 (317)
T d2b78a2         144 AGKTVLNLFSYTAAFSVA----AAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVF------DYFKYARR  213 (317)
T ss_dssp             BTCEEEEETCTTTHHHHH----HHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHH------HHHHHHHH
T ss_pred             CCCceeecCCCCcHHHHH----HHhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccHH------HHHHHHHh
Confidence            5788876644 5666543    445787 6999999887766555433      236888888873      22344444


Q ss_pred             HhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhh
Q 024145           86 KFGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTI  165 (272)
Q Consensus        86 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~  165 (272)
                      +..++|++|..+..........  .+.   .       .....+++.+++.+.  ++| +++++|.+...        . 
T Consensus       214 ~~~~fD~Ii~DPP~f~~~~~~~--~~~---~-------~~~~~L~~~a~~ll~--pgG-~l~~~scs~~~--------~-  269 (317)
T d2b78a2         214 HHLTYDIIIIDPPSFARNKKEV--FSV---S-------KDYHKLIRQGLEILS--ENG-LIIASTNAANM--------T-  269 (317)
T ss_dssp             TTCCEEEEEECCCCC-----CC--CCH---H-------HHHHHHHHHHHHTEE--EEE-EEEEEECCTTS--------C-
T ss_pred             hcCCCCEEEEcChhhccchhHH--HHH---H-------HHHHHHHHHHHHHcC--CCC-EEEEEeCCccC--------C-
Confidence            4457999999876443211111  111   1       123345666777663  345 44444433211        1 


Q ss_pred             hHHHHHHHHHHHHHHhcCCCcEEEEEeC
Q 024145          166 SKYGILGLVKCLAAELGQYGIRVNCVSP  193 (272)
Q Consensus       166 sK~a~~~~~~~la~e~~~~gi~v~~i~P  193 (272)
                          .+.|...+...+...+.++..+..
T Consensus       270 ----~~~f~~~v~~a~~~~~~~~~~~~~  293 (317)
T d2b78a2         270 ----VSQFKKQIEKGFGKQKHTYLDLQQ  293 (317)
T ss_dssp             ----HHHHHHHHHHHHTTCCCEEEEEEC
T ss_pred             ----HHHHHHHHHHHHHHcCCeEEEecc
Confidence                123334444445556777766653

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.86  E-value=0.63  Score=34.64  Aligned_cols=38  Identities=21%  Similarity=0.245  Sum_probs=31.7

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHH
Q 024145           18 AIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLA   56 (272)
Q Consensus        18 vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~   56 (272)
                      +.|. |.|.+|..+|..|+++|++|++.+.+++..+.+.
T Consensus         3 I~Vi-GlG~vGl~~a~~la~~g~~V~g~D~n~~~i~~ln   40 (202)
T d1mv8a2           3 ISIF-GLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLIN   40 (202)
T ss_dssp             EEEE-CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             EEEE-CCCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHhc
Confidence            4555 6899999999999999999999998877655554

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=93.76  E-value=0.045  Score=41.40  Aligned_cols=73  Identities=23%  Similarity=0.198  Sum_probs=54.4

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      ..++.||+||=.|+..|+   ++..++..|+ +|+.++.++...+...+.. .++.++.+|+.+.             .+
T Consensus        44 ~~dl~Gk~VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~~a~~~ar~N~-~~~~~~~~D~~~l-------------~~  106 (197)
T d1ne2a_          44 DGNIGGRSVIDAGTGNGI---LACGSYLLGAESVTAFDIDPDAIETAKRNC-GGVNFMVADVSEI-------------SG  106 (197)
T ss_dssp             HTSSBTSEEEEETCTTCH---HHHHHHHTTBSEEEEEESCHHHHHHHHHHC-TTSEEEECCGGGC-------------CC
T ss_pred             cCCCCCCEEEEeCCCCcH---HHHHHHHcCCCcccccccCHHHHHHHHHcc-ccccEEEEehhhc-------------CC
Confidence            357899999999998773   3345677775 6999999887766555444 5688999998542             25


Q ss_pred             CccEEEeCCCC
Q 024145           89 KLDIMYNNAGI   99 (272)
Q Consensus        89 ~id~lv~~ag~   99 (272)
                      ++|++|.|..+
T Consensus       107 ~fD~Vi~NPPf  117 (197)
T d1ne2a_         107 KYDTWIMNPPF  117 (197)
T ss_dssp             CEEEEEECCCC
T ss_pred             cceEEEeCccc
Confidence            79999999764

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=93.71  E-value=0.31  Score=35.97  Aligned_cols=83  Identities=20%  Similarity=0.201  Sum_probs=53.2

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHH---------------HHHHHH
Q 024145           16 KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNED---------------EVINLV   80 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~---------------~~~~~~   80 (272)
                      .+++|.|| |-.|.+.++-....|++|.+.+.+....+++.+..+.   ++..+..+.+               ..++.-
T Consensus        30 a~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l~~~---~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~  105 (183)
T d1l7da1          30 ARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGK---FITVDDEAMKTAETAGGYAKEMGEEFRKKQA  105 (183)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCE---ECCC-----------------------CCHH
T ss_pred             cEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhhcc---eEEEeccccccccccccchhhcCHHHHHHHH
Confidence            47888884 6788998888899999999999999888777654332   2222221111               112223


Q ss_pred             HHHHHHhCCccEEEeCCCCCCC
Q 024145           81 DTAVSKFGKLDIMYNNAGILDR  102 (272)
Q Consensus        81 ~~~~~~~g~id~lv~~ag~~~~  102 (272)
                      +.+.+...+.|++|..+=+...
T Consensus       106 ~~l~~~l~~aDlVI~talipG~  127 (183)
T d1l7da1         106 EAVLKELVKTDIAITTALIPGK  127 (183)
T ss_dssp             HHHHHHHTTCSEEEECCCCTTS
T ss_pred             HHHHHHHHhhhhheeeeecCCc
Confidence            4444555689999998876554

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=93.54  E-value=0.1  Score=38.95  Aligned_cols=41  Identities=15%  Similarity=0.030  Sum_probs=35.9

Q ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcch
Q 024145           10 FKRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKL   51 (272)
Q Consensus        10 ~~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~   51 (272)
                      ..++.++++.|.| .|.||+++++.|..-|.+|+..++....
T Consensus        39 ~~~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~   79 (188)
T d2naca1          39 AYDLEAMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHRLP   79 (188)
T ss_dssp             CCCCTTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSCCC
T ss_pred             ceeccccceeecc-ccccchhhhhhhhccCceEEEEeecccc
Confidence            4568999999999 7899999999999999999999886543

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.54  E-value=0.22  Score=38.04  Aligned_cols=43  Identities=12%  Similarity=0.170  Sum_probs=35.0

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHH
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADK   58 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~   58 (272)
                      ..+++||..|+..|   ..+..|+++|++|+.++-++...+.+.++
T Consensus        44 ~~~~rvLd~GCG~G---~~a~~LA~~G~~V~gvD~S~~ai~~a~~~   86 (229)
T d2bzga1          44 KSGLRVFFPLCGKA---VEMKWFADRGHSVVGVEISELGIQEFFTE   86 (229)
T ss_dssp             CCSCEEEETTCTTC---THHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCc---HHHHHHHhCCCcEEEEeCCHHHHHHHHHH
Confidence            36789999999876   34888999999999999998877665544

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=93.36  E-value=0.24  Score=33.50  Aligned_cols=34  Identities=24%  Similarity=0.308  Sum_probs=30.4

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcc
Q 024145           16 KVAIITGGASGIGAMAVELFHENGAKVVIADVQDK   50 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~   50 (272)
                      |+++|.| +|.+|..+|..|++.|.+|.++.|.+.
T Consensus        23 ~~v~IiG-gG~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          23 KSLVVIG-GGYIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CeEEEEC-CCccceeeeeeecccccEEEEEEecce
Confidence            7888888 579999999999999999999988765

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=93.26  E-value=0.38  Score=36.02  Aligned_cols=74  Identities=22%  Similarity=0.235  Sum_probs=53.5

Q ss_pred             CCCCCCcEEEEeCCCCh-HHHHHHHHHHHcCC-eEEEeecCcchHHHHHHH---hCCceEEEEecCCCHHHHHHHHHHHH
Q 024145           10 FKRLEGKVAIITGGASG-IGAMAVELFHENGA-KVVIADVQDKLGEDLADK---LGQDVCYIHCDISNEDEVINLVDTAV   84 (272)
Q Consensus        10 ~~~l~~k~vlItGas~g-iG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~   84 (272)
                      ..+++|+++|=.|+..| ++.    .++++|+ +|++++.++...+...+.   .+.+..++..|+.+.           
T Consensus        42 ~~dl~g~~vLDlg~GtG~l~i----~a~~~g~~~v~~vdi~~~~~~~a~~N~~~~~~~~~~~~~d~~~~-----------  106 (201)
T d1wy7a1          42 LGDIEGKVVADLGAGTGVLSY----GALLLGAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEF-----------  106 (201)
T ss_dssp             TTSSTTCEEEEETCTTCHHHH----HHHHTTCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGC-----------
T ss_pred             cCCCCCCEEEECcCcchHHHH----HHHHcCCCEEEEEcCcHHHHHHHHHHHHHcCCCceEEECchhhh-----------
Confidence            45689999998888665 443    3456785 799999998776655543   356788888887442           


Q ss_pred             HHhCCccEEEeCCCCC
Q 024145           85 SKFGKLDIMYNNAGIL  100 (272)
Q Consensus        85 ~~~g~id~lv~~ag~~  100 (272)
                        .+++|++|.|..+.
T Consensus       107 --~~~fD~Vi~nPP~~  120 (201)
T d1wy7a1         107 --NSRVDIVIMNPPFG  120 (201)
T ss_dssp             --CCCCSEEEECCCCS
T ss_pred             --CCcCcEEEEcCccc
Confidence              24799999998753

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=93.16  E-value=0.23  Score=33.58  Aligned_cols=34  Identities=24%  Similarity=0.269  Sum_probs=29.8

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcc
Q 024145           16 KVAIITGGASGIGAMAVELFHENGAKVVIADVQDK   50 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~   50 (272)
                      |+++|.| +|.+|..+|..|.+.|.+|.++.|.+.
T Consensus        22 ~~vvIiG-gG~ig~E~A~~l~~~G~~Vtlve~~~~   55 (116)
T d1gesa2          22 ERVAVVG-AGYIGVELGGVINGLGAKTHLFEMFDA   55 (116)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CEEEEEC-CChhhHHHHHHhhccccEEEEEeecch
Confidence            6777877 679999999999999999999988754

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=93.15  E-value=0.085  Score=36.33  Aligned_cols=37  Identities=22%  Similarity=0.302  Sum_probs=31.9

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcch
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKL   51 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~   51 (272)
                      .+|+++|.| +|.+|..+|..|++.|.+|.++.+.+..
T Consensus        29 ~~~~vvIIG-gG~iG~E~A~~l~~~g~~Vtli~~~~~~   65 (121)
T d1d7ya2          29 PQSRLLIVG-GGVIGLELAATARTAGVHVSLVETQPRL   65 (121)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred             cCCeEEEEC-cchhHHHHHHHhhcccceEEEEeecccc
Confidence            357888888 6799999999999999999999887653

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=93.12  E-value=0.26  Score=34.68  Aligned_cols=83  Identities=10%  Similarity=0.103  Sum_probs=57.1

Q ss_pred             CCcEEEEeCCC---ChHHHHHHHHHHHcCCeEEEeecCcchHH-----HHHHHhCCceEEEEecCCCHHHHHHHHHHHHH
Q 024145           14 EGKVAIITGGA---SGIGAMAVELFHENGAKVVIADVQDKLGE-----DLADKLGQDVCYIHCDISNEDEVINLVDTAVS   85 (272)
Q Consensus        14 ~~k~vlItGas---~giG~aia~~la~~G~~V~~~~r~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (272)
                      +-|++.|.|+|   +..|..+++.|.+.|++|+.+..+.+...     .-..+++..+..+.+ ...++.+..+++++.+
T Consensus        18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i~G~~~~~sl~dlp~~iD~v~i-~vp~~~~~~~~~e~~~   96 (139)
T d2d59a1          18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLDIPDKIEVVDL-FVKPKLTMEYVEQAIK   96 (139)
T ss_dssp             HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGCSSCCSEEEE-CSCHHHHHHHHHHHHH
T ss_pred             cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccccCCCcccccccccCccceEEEE-EeCHHHHHHHHHHHHH
Confidence            46899999998   57999999999999999999875433211     001223333333222 2467888888888877


Q ss_pred             HhCCccEEEeCCCC
Q 024145           86 KFGKLDIMYNNAGI   99 (272)
Q Consensus        86 ~~g~id~lv~~ag~   99 (272)
                      .  ++..++...|.
T Consensus        97 ~--g~k~v~~~~G~  108 (139)
T d2d59a1          97 K--GAKVVWFQYNT  108 (139)
T ss_dssp             H--TCSEEEECTTC
T ss_pred             h--CCCEEEEeccc
Confidence            6  57788887774

>d2fr1a2 c.2.1.2 (A:1448-1656) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=93.05  E-value=1.2  Score=32.98  Aligned_cols=143  Identities=12%  Similarity=0.063  Sum_probs=79.0

Q ss_pred             CCCCcEEEEeCCC--ChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024145           12 RLEGKVAIITGGA--SGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGK   89 (272)
Q Consensus        12 ~l~~k~vlItGas--~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (272)
                      ...|.++++....  .....++...|.+.|.+++.+.-...                    .+.+.+   . ......+.
T Consensus        22 ~~~g~~lv~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~--------------------~~~~~l---~-~~~~~~~~   77 (209)
T d2fr1a2          22 RLDGTWLVAKYAGTADETSTAAREALESAGARVRELVVDAR--------------------CGRDEL---A-ERLRSVGE   77 (209)
T ss_dssp             CCCSEEEEEECTTSSHHHHHHHHHHHHTTSCEEEEEECCTT--------------------CCHHHH---H-HHHTTSCC
T ss_pred             CCCCcEEEEeCCCCchHHHHHHHHHHHhCCCeEEEecCCCc--------------------cCHHHH---H-HHhhccCC
Confidence            3456665555332  34778888889999988765543211                    122222   2 22334467


Q ss_pred             ccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEecccccccCCCCchhhhhHHH
Q 024145           90 LDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYG  169 (272)
Q Consensus        90 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a  169 (272)
                      ++.+|+..+.....   .... ...     ...+...+.++|.+...   ....++.+++...... ......-+...++
T Consensus        78 ~~~vv~l~~~~~~~---~~~~-~~~-----~~~~~~~l~l~qal~~~---~~~~~l~~vT~~a~~~-~~~d~~~~p~~A~  144 (209)
T d2fr1a2          78 VAGVLSLLAVDEAE---PEEA-PLA-----LASLADTLSLVQAMVSA---ELGCPLWTVTESAVAT-GPFERVRNAAHGA  144 (209)
T ss_dssp             CSEEEECTTTTCCC---CSSC-GGG-----CHHHHHHHHHHHHHHHT---TCCCCEEEEEESCSCS-STTSCCSCGGGHH
T ss_pred             CCeEEEeCCCCCCC---Ccch-hHH-----HHHHHHHHHHHHHHHhC---CCCCcEEEEEcCCccc-CCCcccCCHhHHh
Confidence            89999887654321   1111 111     11233455666665432   2345677776543222 2223344678899


Q ss_pred             HHHHHHHHHHHhcCCCcEEEEE
Q 024145          170 ILGLVKCLAAELGQYGIRVNCV  191 (272)
Q Consensus       170 ~~~~~~~la~e~~~~gi~v~~i  191 (272)
                      +-+|+|+++.|+....+++..+
T Consensus       145 l~Gl~r~~~~E~P~l~~~~vDl  166 (209)
T d2fr1a2         145 LWGVGRVIALENPAVWGGLVDV  166 (209)
T ss_dssp             HHHHHHHHHHHCGGGEEEEEEE
T ss_pred             HHHHHHHHHHhCCCceEEEEEC
Confidence            9999999999986533444444

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.03  E-value=0.18  Score=34.53  Aligned_cols=35  Identities=26%  Similarity=0.341  Sum_probs=30.5

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcc
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGAKVVIADVQDK   50 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~   50 (272)
                      .|+++|.| +|-||..+|..|++.|.+|.++.+.+.
T Consensus        23 p~~~vIiG-~G~ig~E~A~~l~~lG~~Vtii~~~~~   57 (122)
T d1v59a2          23 PKRLTIIG-GGIIGLEMGSVYSRLGSKVTVVEFQPQ   57 (122)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCeEEEEC-CCchHHHHHHHHHhhCcceeEEEeccc
Confidence            37888888 579999999999999999999988654

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=92.87  E-value=0.15  Score=37.75  Aligned_cols=39  Identities=18%  Similarity=0.229  Sum_probs=33.7

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcch
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKL   51 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~   51 (272)
                      ..++|+++|.| +|-.|.+.|..|+++|++|.+..+++..
T Consensus        40 ~~~~k~V~IIG-aGPAGL~AA~~la~~G~~Vtl~E~~~~~   78 (179)
T d1ps9a3          40 AVQKKNLAVVG-AGPAGLAFAINAAARGHQVTLFDAHSEI   78 (179)
T ss_dssp             CSSCCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred             CCCCcEEEEEC-ccHHHHHHHHHHHhhccceEEEeccCcc
Confidence            35778999999 5789999999999999999999987654

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.76  E-value=0.28  Score=33.65  Aligned_cols=34  Identities=21%  Similarity=0.264  Sum_probs=30.1

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcc
Q 024145           16 KVAIITGGASGIGAMAVELFHENGAKVVIADVQDK   50 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~   50 (272)
                      |+++|.|| |.||..+|..|++.|.+|.++.|.+.
T Consensus        23 k~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~~   56 (125)
T d3grsa2          23 GRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHDK   56 (125)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CEEEEEcC-CccHHHHHHHHhcCCcEEEEEeeccc
Confidence            78889885 58999999999999999999998754

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=92.72  E-value=0.47  Score=38.24  Aligned_cols=78  Identities=12%  Similarity=0.106  Sum_probs=51.7

Q ss_pred             CCCcEEEEeCCC-ChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---C-CceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           13 LEGKVAIITGGA-SGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---G-QDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        13 l~~k~vlItGas-~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      .+|++||=.++. |+++.+    +++.+.+|+.++.++...+...+..   + .++.++..|..+.      .+......
T Consensus       144 ~~g~rVLDl~~gtG~~s~~----~a~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~~~~------~~~~~~~~  213 (318)
T d1wxxa2         144 FRGERALDVFSYAGGFALH----LALGFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDL------LRRLEKEG  213 (318)
T ss_dssp             CCEEEEEEETCTTTHHHHH----HHHHEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHH------HHHHHHTT
T ss_pred             hCCCeeeccCCCCcHHHHH----HHhcCCcEEeecchHHHHHHHHHHHHHcCCCCcceeeccHHHH------hhhhHhhh
Confidence            578888877664 455433    4456778999999988776655443   3 3678888876442      22333344


Q ss_pred             CCccEEEeCCCCC
Q 024145           88 GKLDIMYNNAGIL  100 (272)
Q Consensus        88 g~id~lv~~ag~~  100 (272)
                      ..+|.||.++...
T Consensus       214 ~~fD~Vi~DpP~~  226 (318)
T d1wxxa2         214 ERFDLVVLDPPAF  226 (318)
T ss_dssp             CCEEEEEECCCCS
T ss_pred             cCCCEEEEcCCcc
Confidence            5799999998644

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=92.70  E-value=0.57  Score=37.80  Aligned_cols=112  Identities=14%  Similarity=0.087  Sum_probs=65.8

Q ss_pred             CCcEEEEeCCC-ChHHHHHHHHHHHcCC-eEEEeecCcchHHHHHHHh-----CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024145           14 EGKVAIITGGA-SGIGAMAVELFHENGA-KVVIADVQDKLGEDLADKL-----GQDVCYIHCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus        14 ~~k~vlItGas-~giG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (272)
                      .|++||=.++. |+++.+    +++.|+ +|+.++.++...+...+..     ..++.++..|+.+      ........
T Consensus       145 ~g~~VLDl~~g~G~~si~----~a~~ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~~------~~~~~~~~  214 (324)
T d2as0a2         145 PGDRVLDVFTYTGGFAIH----AAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFE------EMEKLQKK  214 (324)
T ss_dssp             TTCEEEETTCTTTHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHH------HHHHHHHT
T ss_pred             CCCeeecccCcccchhhh----hhhcCCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeechhhh------hhHHHHhc
Confidence            47888877764 555554    345676 7999999988766555433     2367788877632      23333344


Q ss_pred             hCCccEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCceEEEEe
Q 024145           87 FGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTA  149 (272)
Q Consensus        87 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~is  149 (272)
                      ..++|++|.++.....        +..+.....    .....+++.+.+.++  ++|.+++.|
T Consensus       215 ~~~fD~Vi~DpP~~~~--------~~~~~~~~~----~~y~~l~~~a~~ll~--pGG~lv~~s  263 (324)
T d2as0a2         215 GEKFDIVVLDPPAFVQ--------HEKDLKAGL----RAYFNVNFAGLNLVK--DGGILVTCS  263 (324)
T ss_dssp             TCCEEEEEECCCCSCS--------SGGGHHHHH----HHHHHHHHHHHTTEE--EEEEEEEEE
T ss_pred             cCCCCchhcCCccccC--------CHHHHHHHH----HHHHHHHHHHHHHcC--CCcEEEEEe
Confidence            4579999998864332        111222221    233446666666663  456666554

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=92.64  E-value=0.065  Score=41.99  Aligned_cols=34  Identities=21%  Similarity=0.260  Sum_probs=29.2

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCc
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGAKVVIADVQD   49 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~   49 (272)
                      +|+|+|.| +|--|...|..|+++|++|+++.+++
T Consensus         1 ~KkV~IIG-aG~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIG-AGVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            58899998 56788999999999999999997653

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=92.56  E-value=0.065  Score=40.13  Aligned_cols=41  Identities=10%  Similarity=0.219  Sum_probs=34.4

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHH
Q 024145           16 KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLAD   57 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~   57 (272)
                      +++.|.| +|..|.+++..|+++|++|.+.+|+++..+.+.+
T Consensus         8 ~KI~ViG-aG~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~   48 (189)
T d1n1ea2           8 NKAVVFG-SGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNE   48 (189)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHH
T ss_pred             ceEEEEC-CCHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhh
Confidence            4678888 5679999999999999999999999887766654

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=92.35  E-value=0.15  Score=36.40  Aligned_cols=37  Identities=19%  Similarity=0.166  Sum_probs=29.9

Q ss_pred             CcEEEEe-CCCChHHHHHHHHHHHcCCeEEEeecCcch
Q 024145           15 GKVAIIT-GGASGIGAMAVELFHENGAKVVIADVQDKL   51 (272)
Q Consensus        15 ~k~vlIt-Gas~giG~aia~~la~~G~~V~~~~r~~~~   51 (272)
                      ++.++|. .+++.||..+|..|++.|.+|.++.+.+..
T Consensus        39 ~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~~   76 (156)
T d1djqa2          39 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHLA   76 (156)
T ss_dssp             CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCTT
T ss_pred             CCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcc
Confidence            4455554 567899999999999999999999887543

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=92.30  E-value=1.5  Score=35.01  Aligned_cols=77  Identities=13%  Similarity=0.083  Sum_probs=50.3

Q ss_pred             CCcEEEEeCC-CChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh------CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024145           14 EGKVAIITGG-ASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL------GQDVCYIHCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus        14 ~~k~vlItGa-s~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (272)
                      ++++||=..+ +|+++.+    +++.|++|+.++.+....+...+..      ..++.++..|+.      +.++....+
T Consensus       132 ~~~rVLdlf~~tG~~sl~----aa~~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~D~~------~~l~~~~~~  201 (309)
T d2igta1         132 RPLKVLNLFGYTGVASLV----AAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAM------KFIQREERR  201 (309)
T ss_dssp             SCCEEEEETCTTCHHHHH----HHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHH------HHHHHHHHH
T ss_pred             CCCeEEEecCCCcHHHHH----HHhCCCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEEeCCHH------HhHHHHhhc
Confidence            4667775544 5555544    4568999999999887766555432      235788887763      234444444


Q ss_pred             hCCccEEEeCCCCC
Q 024145           87 FGKLDIMYNNAGIL  100 (272)
Q Consensus        87 ~g~id~lv~~ag~~  100 (272)
                      ..++|+||.+....
T Consensus       202 ~~~fD~IilDPP~f  215 (309)
T d2igta1         202 GSTYDIILTDPPKF  215 (309)
T ss_dssp             TCCBSEEEECCCSE
T ss_pred             CCCCCEEEECCCcc
Confidence            56799999987643

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=92.24  E-value=0.13  Score=37.26  Aligned_cols=38  Identities=24%  Similarity=0.452  Sum_probs=34.9

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcch
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKL   51 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~   51 (272)
                      +.||+++|.| -|-+|+.+|+++...|++|+++..++-.
T Consensus        21 laGk~vvV~G-YG~vGrG~A~~~rg~Ga~V~V~E~DPi~   58 (163)
T d1v8ba1          21 ISGKIVVICG-YGDVGKGCASSMKGLGARVYITEIDPIC   58 (163)
T ss_dssp             CTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHH
T ss_pred             ecCCEEEEec-ccccchhHHHHHHhCCCEEEEEecCchh
Confidence            6899999998 8899999999999999999999988754

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=92.20  E-value=0.29  Score=33.24  Aligned_cols=35  Identities=17%  Similarity=0.177  Sum_probs=30.4

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcc
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGAKVVIADVQDK   50 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~   50 (272)
                      .|+++|.| +|.+|..+|..|++.|.+|.++.|.+.
T Consensus        22 p~~v~IiG-gG~iG~E~A~~l~~~g~~Vtlv~~~~~   56 (117)
T d1onfa2          22 SKKIGIVG-SGYIAVELINVIKRLGIDSYIFARGNR   56 (117)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSSS
T ss_pred             CCEEEEEC-CchHHHHHHHHHHhccccceeeehhcc
Confidence            47888888 579999999999999999999988653

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.86  E-value=0.21  Score=39.85  Aligned_cols=25  Identities=24%  Similarity=0.244  Sum_probs=21.9

Q ss_pred             CChHHHHHHHHHHHcCCeEEEeecC
Q 024145           24 ASGIGAMAVELFHENGAKVVIADVQ   48 (272)
Q Consensus        24 s~giG~aia~~la~~G~~V~~~~r~   48 (272)
                      ||..|.++|+.+..+|+.|+++.+.
T Consensus        45 SGk~G~alA~~~~~~Ga~V~li~g~   69 (290)
T d1p9oa_          45 SGRRGATSAEAFLAAGYGVLFLYRA   69 (290)
T ss_dssp             CCHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             chHHHHHHHHHHHHcCCEEEEEecC
Confidence            4789999999999999999888643

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=91.56  E-value=0.087  Score=38.86  Aligned_cols=36  Identities=14%  Similarity=0.147  Sum_probs=30.3

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCe-EEEeecCcc
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAK-VVIADVQDK   50 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~-V~~~~r~~~   50 (272)
                      .+|+|+|.| +|-.|...|..|+++|++ |.++.|+..
T Consensus         3 ~~~kVaIIG-aGpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           3 YSAKIALLG-AGPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GGCCEEEEC-CSHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCCEEEEEC-ChHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            467888988 579999999999999985 888887654

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=91.55  E-value=0.2  Score=36.91  Aligned_cols=30  Identities=23%  Similarity=0.233  Sum_probs=24.8

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCC-eEEEee
Q 024145           17 VAIITGGASGIGAMAVELFHENGA-KVVIAD   46 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~-~V~~~~   46 (272)
                      +|-|.||||-.|..+.+.|+++-. ++..+.
T Consensus         3 kVaIvGATGyvG~eLirlL~~HP~~ei~~l~   33 (176)
T d1vkna1           3 RAGIIGATGYTGLELVRLLKNHPEAKITYLS   33 (176)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHCTTEEEEEEE
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCCceEEEee
Confidence            689999999999999999998754 554443

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=91.55  E-value=0.2  Score=33.99  Aligned_cols=37  Identities=16%  Similarity=0.260  Sum_probs=32.1

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcc
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDK   50 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~   50 (272)
                      ..+|.++|.| +|-+|..+|..|++.|.+|.++.|.+.
T Consensus        20 ~~~~~vvVvG-gG~ig~E~A~~l~~~g~~vt~i~~~~~   56 (121)
T d1mo9a2          20 EPGSTVVVVG-GSKTAVEYGCFFNATGRRTVMLVRTEP   56 (121)
T ss_dssp             CCCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHhcchhheEeeccch
Confidence            3578898888 679999999999999999999988654

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=91.51  E-value=0.17  Score=35.99  Aligned_cols=37  Identities=11%  Similarity=0.022  Sum_probs=29.5

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHH
Q 024145           18 AIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDL   55 (272)
Q Consensus        18 vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~   55 (272)
                      +-|.| .|.+|.++++.|+++|++|+..++++......
T Consensus         3 IgiIG-~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~   39 (152)
T d1i36a2           3 VGFIG-FGEVAQTLASRLRSRGVEVVTSLEGRSPSTIE   39 (152)
T ss_dssp             EEEES-CSHHHHHHHHHHHHTTCEEEECCTTCCHHHHH
T ss_pred             EEEEc-HHHHHHHHHHHHHHCCCeEEEEcCchhHHHHH
Confidence            44554 69999999999999999999888776655433

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=91.38  E-value=0.17  Score=38.62  Aligned_cols=34  Identities=21%  Similarity=0.246  Sum_probs=29.4

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCc
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGAKVVIADVQD   49 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~   49 (272)
                      .|+|+|.| +|-.|.+.|..|+++|++|.++.|+.
T Consensus         6 ~~kVvVIG-aGiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           6 QKRVVVLG-SGVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             SCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCcEEEEC-ccHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            35788888 57899999999999999999999854

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.30  E-value=0.056  Score=45.89  Aligned_cols=36  Identities=17%  Similarity=0.399  Sum_probs=30.8

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCc
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQD   49 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~   49 (272)
                      |++.+|||.|+ ||||..+++.|+..|. ++.+++.+.
T Consensus        35 l~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~   71 (426)
T d1yovb1          35 LDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDT   71 (426)
T ss_dssp             HHHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCB
T ss_pred             HhcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCC
Confidence            56678999997 7799999999999998 688887654

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=91.04  E-value=0.13  Score=40.27  Aligned_cols=35  Identities=29%  Similarity=0.328  Sum_probs=31.6

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEee
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIAD   46 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~   46 (272)
                      .+++||+++|-| .|.+|..+++.|.+.|++|+.++
T Consensus        32 ~~l~g~~v~IQG-fGnVG~~~a~~L~e~Gakvvavs   66 (255)
T d1bgva1          32 DTLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLS   66 (255)
T ss_dssp             CCSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEE
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEe
Confidence            368999999999 79999999999999999988764

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=91.02  E-value=0.16  Score=34.84  Aligned_cols=35  Identities=26%  Similarity=0.201  Sum_probs=30.0

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcc
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGAKVVIADVQDK   50 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~   50 (272)
                      +|.++|.| +|.+|..+|..|++.|.+|.++.|.+.
T Consensus        32 ~~~vvIiG-gG~iG~E~A~~l~~~g~~Vtlv~~~~~   66 (122)
T d1xhca2          32 SGEAIIIG-GGFIGLELAGNLAEAGYHVKLIHRGAM   66 (122)
T ss_dssp             HSEEEEEE-CSHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred             CCcEEEEC-CcHHHHHHHHHhhcccceEEEEecccc
Confidence            36788877 689999999999999999999987653

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=90.86  E-value=0.21  Score=34.07  Aligned_cols=35  Identities=26%  Similarity=0.276  Sum_probs=30.4

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcc
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGAKVVIADVQDK   50 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~   50 (272)
                      .|+++|.| +|.||..+|..|++.|.+|.++.+.+.
T Consensus        22 p~~i~IiG-~G~ig~E~A~~l~~~G~~Vtiv~~~~~   56 (119)
T d3lada2          22 PGKLGVIG-AGVIGLELGSVWARLGAEVTVLEAMDK   56 (119)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEEC-CChHHHHHHHHHHHcCCceEEEEeecc
Confidence            37888998 579999999999999999999887653

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=90.80  E-value=0.19  Score=35.74  Aligned_cols=34  Identities=12%  Similarity=0.133  Sum_probs=25.6

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcC----CeEEEeecCc
Q 024145           16 KVAIITGGASGIGAMAVELFHENG----AKVVIADVQD   49 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G----~~V~~~~r~~   49 (272)
                      |++-|.||||-.|+.+.+.|+++.    .++++..++.
T Consensus         2 kkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~   39 (146)
T d1t4ba1           2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQ   39 (146)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSS
T ss_pred             cEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccc
Confidence            367889999999999999888763    2466555443

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=90.65  E-value=0.22  Score=34.68  Aligned_cols=36  Identities=14%  Similarity=0.203  Sum_probs=31.5

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcc
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDK   50 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~   50 (272)
                      ++|+++|.| +|.+|..+|..|++.|.+|.++.+.+.
T Consensus        34 ~~k~v~VIG-gG~iG~E~A~~l~~~g~~Vtvie~~~~   69 (133)
T d1q1ra2          34 ADNRLVVIG-GGYIGLEVAATAIKANMHVTLLDTAAR   69 (133)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             cCCEEEEEC-CchHHHHHHHHHHhhCcceeeeeeccc
Confidence            468888887 689999999999999999999988654

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=90.60  E-value=0.18  Score=34.08  Aligned_cols=35  Identities=17%  Similarity=0.336  Sum_probs=29.9

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcc
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGAKVVIADVQDK   50 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~   50 (272)
                      .|+++|.| +|.+|..+|..|++.|.+|.++.+.+.
T Consensus        21 p~~vvIiG-gG~~G~E~A~~l~~~g~~Vtlve~~~~   55 (115)
T d1lvla2          21 PQHLVVVG-GGYIGLELGIAYRKLGAQVSVVEARER   55 (115)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCeEEEEC-CCHHHHHHHHHHhhcccceEEEeeecc
Confidence            36777776 689999999999999999999988654

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=90.57  E-value=0.45  Score=32.42  Aligned_cols=35  Identities=20%  Similarity=0.332  Sum_probs=30.9

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcc
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGAKVVIADVQDK   50 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~   50 (272)
                      .|.++|.| +|-||..+|..|.+.|.+|.++.|.+.
T Consensus        25 p~~~viiG-~G~iglE~A~~~~~~G~~Vtvi~~~~~   59 (123)
T d1dxla2          25 PKKLVVIG-AGYIGLEMGSVWGRIGSEVTVVEFASE   59 (123)
T ss_dssp             CSEEEESC-CSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCeEEEEc-cchHHHHHHHHHHhcCCeEEEEEEccc
Confidence            37888888 579999999999999999999988764

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=90.56  E-value=0.53  Score=32.05  Aligned_cols=32  Identities=16%  Similarity=0.186  Sum_probs=28.0

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCeEEEeecC
Q 024145           16 KVAIITGGASGIGAMAVELFHENGAKVVIADVQ   48 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~~V~~~~r~   48 (272)
                      |+++|.| +|-||..+|..|.+.|.+|.++.|+
T Consensus        21 ~~vvIIG-gG~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          21 GKTLVVG-ASYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CSEEEEC-CSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CeEEEEC-CCccHHHHHHHHhhcCCeEEEEEec
Confidence            5677877 5799999999999999999988875

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=90.54  E-value=0.2  Score=40.06  Aligned_cols=45  Identities=24%  Similarity=0.422  Sum_probs=28.0

Q ss_pred             cEEEEeCCCCh--H--HHHHHHHHHHcCCeEEEeecCcchHHHHHHHhC
Q 024145           16 KVAIITGGASG--I--GAMAVELFHENGAKVVIADVQDKLGEDLADKLG   60 (272)
Q Consensus        16 k~vlItGas~g--i--G~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~   60 (272)
                      |++||++|+.|  +  ..+++++|.++|++|..++.......++.+..+
T Consensus         1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~~~~~~~~~~~~~   49 (351)
T d1f0ka_           1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPKHG   49 (351)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGGGT
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEeCCcchhhcccccC
Confidence            56666654433  3  467999999999999876654333334444443

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=90.43  E-value=0.089  Score=39.54  Aligned_cols=31  Identities=16%  Similarity=0.229  Sum_probs=27.6

Q ss_pred             cEEEEeCCCChHH-----HHHHHHHHHcCCeEEEee
Q 024145           16 KVAIITGGASGIG-----AMAVELFHENGAKVVIAD   46 (272)
Q Consensus        16 k~vlItGas~giG-----~aia~~la~~G~~V~~~~   46 (272)
                      |+++|||-..|.|     ..++.+|+++|++|.+++
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id   37 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK   37 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence            7899999988999     467899999999998875

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=90.40  E-value=0.67  Score=32.85  Aligned_cols=78  Identities=8%  Similarity=0.076  Sum_probs=51.4

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCC---------ceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145           18 AIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQ---------DVCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus        18 vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~---------~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      +-+.| -|-+|.+++++|++.|+.+ ...|+.++.++..++.+.         ....+-..+.+.+.+....+.+.+...
T Consensus         3 Ig~IG-lG~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~l~~~~~   80 (156)
T d2cvza2           3 VAFIG-LGAMGYPMAGHLARRFPTL-VWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYPYLR   80 (156)
T ss_dssp             EEEEC-CSTTHHHHHHHHHTTSCEE-EECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTTTCC
T ss_pred             EEEEe-HHHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHHHcCCcccccccccceeEEEecccchhhhhhhhcccccccc
Confidence            44555 4899999999999988765 567777766666655421         234444556677888877777766544


Q ss_pred             CccEEEeCC
Q 024145           89 KLDIMYNNA   97 (272)
Q Consensus        89 ~id~lv~~a   97 (272)
                      +-.++|...
T Consensus        81 ~~~~iid~s   89 (156)
T d2cvza2          81 EGTYWVDAT   89 (156)
T ss_dssp             TTEEEEECS
T ss_pred             ccccccccc
Confidence            444555444

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=90.23  E-value=0.18  Score=40.65  Aligned_cols=36  Identities=33%  Similarity=0.411  Sum_probs=30.5

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcc
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDK   50 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~   50 (272)
                      +.|+++|.| +|--|..+|..|+++|++|.++.++..
T Consensus         1 k~KKI~IIG-aG~sGL~aA~~L~k~G~~V~viEk~~~   36 (314)
T d2bi7a1           1 KSKKILIVG-AGFSGAVIGRQLAEKGHQVHIIDQRDH   36 (314)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHhCCCCEEEEECCCC
Confidence            468899998 567889999999999999999877654

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=90.02  E-value=1.5  Score=31.09  Aligned_cols=48  Identities=17%  Similarity=0.152  Sum_probs=34.1

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHc--CCeEEEee--cCcchHHHHHHHhCCce
Q 024145           16 KVAIITGGASGIGAMAVELFHEN--GAKVVIAD--VQDKLGEDLADKLGQDV   63 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~--G~~V~~~~--r~~~~~~~~~~~~~~~~   63 (272)
                      |++.|.|+||.||.....-+.++  .++|++..  ++-+.+.+...+...+.
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~~f~pk~   53 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRY   53 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHHCCSE
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHHHHhhcc
Confidence            57999999999999999988887  36775543  44445555555555443

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=89.90  E-value=0.39  Score=36.55  Aligned_cols=37  Identities=24%  Similarity=0.393  Sum_probs=31.4

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcc
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDK   50 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~   50 (272)
                      -++|+++|.|| |-.|...|..|+++|++|.++.++..
T Consensus        47 ~~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~~   83 (233)
T d1djqa3          47 KNKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAEK   83 (233)
T ss_dssp             SSCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             cCCceEEEEcc-cHHHHHHHHHHHHhccceeeEeeccc
Confidence            47789999994 67799999999999999999976543

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=89.56  E-value=0.27  Score=39.18  Aligned_cols=35  Identities=23%  Similarity=0.341  Sum_probs=31.4

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEee
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIAD   46 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~   46 (272)
                      .+++||+++|-|- |.+|..+++.|.+.|++|+.++
T Consensus        32 ~~L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vs   66 (293)
T d1hwxa1          32 PGFGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVG   66 (293)
T ss_dssp             SSSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE
Confidence            3689999999995 8999999999999999988765

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=89.54  E-value=0.23  Score=38.48  Aligned_cols=35  Identities=29%  Similarity=0.472  Sum_probs=31.7

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEee
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIAD   46 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~   46 (272)
                      .+++||+++|-| .|.+|..+++.|.+.|++|+.++
T Consensus        27 ~~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vs   61 (242)
T d1v9la1          27 GGIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVS   61 (242)
T ss_dssp             SCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEE
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEee
Confidence            468999999998 89999999999999999988765

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=89.49  E-value=1.5  Score=29.66  Aligned_cols=77  Identities=14%  Similarity=0.179  Sum_probs=50.5

Q ss_pred             CCcEEEEeCCCC-hHH---------HHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHH
Q 024145           14 EGKVAIITGGAS-GIG---------AMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTA   83 (272)
Q Consensus        14 ~~k~vlItGas~-giG---------~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   83 (272)
                      ..|++||.|+.. -||         .+.+++|.+.|++++++..+++...-    ...-..-+.++-...+.+.++++.-
T Consensus         3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVst----d~d~aD~lYfeplt~e~v~~Ii~~E   78 (121)
T d1a9xa4           3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVST----DYDTSDRLYFEPVTLEDVLEIVRIE   78 (121)
T ss_dssp             SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTT----STTSSSEEECCCCSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhc----ChhhcCceEEccCCHHHHHHHHHHh
Confidence            457889998754 344         67788999999999999888765321    1112223444555677776665532


Q ss_pred             HHHhCCccEEEeCCCC
Q 024145           84 VSKFGKLDIMYNNAGI   99 (272)
Q Consensus        84 ~~~~g~id~lv~~ag~   99 (272)
                           ++|.++...|.
T Consensus        79 -----~p~~ii~~~GG   89 (121)
T d1a9xa4          79 -----KPKGVIVQYGG   89 (121)
T ss_dssp             -----CCSEEECSSST
T ss_pred             -----CCCEEEeehhh
Confidence                 68888777664

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=89.44  E-value=0.19  Score=39.81  Aligned_cols=35  Identities=20%  Similarity=0.334  Sum_probs=29.9

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCc
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQD   49 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~   49 (272)
                      +.|+|+|.|| |--|...|..|+++|++|++..+++
T Consensus        29 ~pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          29 NPKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             SCCEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            5578999994 5779999999999999999998754

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=89.42  E-value=0.19  Score=36.45  Aligned_cols=80  Identities=14%  Similarity=0.217  Sum_probs=52.0

Q ss_pred             EEEEeCCCChHHHHHHHHHHHc-CCeEEE-eecCcchH-----HHHH-------------HHhCCceEEEEecCCCHHHH
Q 024145           17 VAIITGGASGIGAMAVELFHEN-GAKVVI-ADVQDKLG-----EDLA-------------DKLGQDVCYIHCDISNEDEV   76 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~-G~~V~~-~~r~~~~~-----~~~~-------------~~~~~~~~~~~~D~~~~~~~   76 (272)
                      ++.|.|++|-+|+++++...+. +++++. ++|.....     .++.             +..-..+. +-.|.+.++..
T Consensus         6 kI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~D-ViIDFs~p~~~   84 (162)
T d1diha1           6 RVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFD-VFIDFTRPEGT   84 (162)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCS-EEEECSCHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCceeeccHHHHhcccc-eEEEeccHHHH
Confidence            6999999999999999999886 566543 34432110     0000             00011122 45899999999


Q ss_pred             HHHHHHHHHHhCCccEEEeCCCC
Q 024145           77 INLVDTAVSKFGKLDIMYNNAGI   99 (272)
Q Consensus        77 ~~~~~~~~~~~g~id~lv~~ag~   99 (272)
                      ...++...+.  ++-+|+-..|.
T Consensus        85 ~~~~~~a~~~--~~~~ViGTTG~  105 (162)
T d1diha1          85 LNHLAFCRQH--GKGMVIGTTGF  105 (162)
T ss_dssp             HHHHHHHHHT--TCEEEECCCCC
T ss_pred             HHHHHHHHhc--cceeEEecCCC
Confidence            9888876655  57788766664

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=89.30  E-value=1.2  Score=29.96  Aligned_cols=80  Identities=15%  Similarity=0.196  Sum_probs=51.8

Q ss_pred             cEEEEeCCC---ChHHHHHHHHHHHcCCeEEEeecCcchHH-----HHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           16 KVAIITGGA---SGIGAMAVELFHENGAKVVIADVQDKLGE-----DLADKLGQDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        16 k~vlItGas---~giG~aia~~la~~G~~V~~~~r~~~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      |++.|.|+|   +..|..+.+.|.+.|++|+.+..+.+...     .-.++++..+....+ ...++.+..+++++.+. 
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~~i~G~~~y~sl~~lp~~~D~vvi-~vp~~~~~~~l~~~~~~-   79 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEIEGLKCYRSVRELPKDVDVIVF-VVPPKVGLQVAKEAVEA-   79 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGSCTTCCEEEE-CSCHHHHHHHHHHHHHT-
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEccccccccCccccccchhccccceEEEE-EeCHHHHHHHHHHHHhc-
Confidence            789999998   56899999999999999998865433211     001223333332221 24577777777777664 


Q ss_pred             CCccEEEeCCC
Q 024145           88 GKLDIMYNNAG   98 (272)
Q Consensus        88 g~id~lv~~ag   98 (272)
                       ++..++...|
T Consensus        80 -g~k~v~~~~g   89 (116)
T d1y81a1          80 -GFKKLWFQPG   89 (116)
T ss_dssp             -TCCEEEECTT
T ss_pred             -CCceEEeccc
Confidence             4667766555

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=89.22  E-value=0.23  Score=36.53  Aligned_cols=33  Identities=24%  Similarity=0.312  Sum_probs=28.0

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcc
Q 024145           17 VAIITGGASGIGAMAVELFHENGAKVVIADVQDK   50 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~~V~~~~r~~~   50 (272)
                      ++.|.| +|..|.++|..|+++|++|.+.+|+.+
T Consensus         2 kI~ViG-aG~~GtalA~~la~~g~~V~l~~r~~~   34 (180)
T d1txga2           2 IVSILG-AGAMGSALSVPLVDNGNEVRIWGTEFD   34 (180)
T ss_dssp             EEEEES-CCHHHHHHHHHHHHHCCEEEEECCGGG
T ss_pred             EEEEEC-CCHHHHHHHHHHHHCCCEEEEEEeccc
Confidence            466777 589999999999999999999988543

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.88  E-value=0.78  Score=36.54  Aligned_cols=73  Identities=22%  Similarity=0.264  Sum_probs=50.3

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCcchHH--HHHHHh--CCceEEEEecCCCHHHHHHHHHHHHHH
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGA-KVVIADVQDKLGE--DLADKL--GQDVCYIHCDISNEDEVINLVDTAVSK   86 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~-~V~~~~r~~~~~~--~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (272)
                      .++||+||-.|++.|+   ++..+++.|+ +|++++.++....  +.....  ..++.++..|+.+...          .
T Consensus        33 ~~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~~~~a~~~~~~~~~~~~i~~~~~~~~~l~~----------~   99 (311)
T d2fyta1          33 IFKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVHL----------P   99 (311)
T ss_dssp             GTTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCC----------S
T ss_pred             cCCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHHHHHHHHHHHHhCCCccceEEEeeHHHhcC----------c
Confidence            3689999999998876   5667788897 6999988765332  111222  3578999998876431          1


Q ss_pred             hCCccEEEeCC
Q 024145           87 FGKLDIMYNNA   97 (272)
Q Consensus        87 ~g~id~lv~~a   97 (272)
                      ..++|+++...
T Consensus       100 ~~~~D~Ivse~  110 (311)
T d2fyta1         100 VEKVDVIISEW  110 (311)
T ss_dssp             CSCEEEEEECC
T ss_pred             cccceEEEEee
Confidence            13799998754

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=88.75  E-value=2  Score=27.75  Aligned_cols=72  Identities=15%  Similarity=0.185  Sum_probs=46.7

Q ss_pred             CCcEEEEeCCCChHH-HHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Q 024145           14 EGKVAIITGGASGIG-AMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDI   92 (272)
Q Consensus        14 ~~k~vlItGas~giG-~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   92 (272)
                      +.|++.+.|- +|+| .++|+.|.++|+.|...++......+...+.+.  .+...+-  ++.           ..+.|.
T Consensus         7 ~~~~ihfiGi-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~~~Gi--~v~~g~~--~~~-----------i~~~d~   70 (96)
T d1p3da1           7 RVQQIHFIGI-GGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQAGA--KIYIGHA--EEH-----------IEGASV   70 (96)
T ss_dssp             TCCEEEEETT-TSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHHHTTC--EEEESCC--GGG-----------GTTCSE
T ss_pred             hCCEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHHCCC--eEEECCc--ccc-----------CCCCCE
Confidence            4467777774 4555 567999999999999999876555444445443  3333222  111           126899


Q ss_pred             EEeCCCCCC
Q 024145           93 MYNNAGILD  101 (272)
Q Consensus        93 lv~~ag~~~  101 (272)
                      +|...++..
T Consensus        71 vV~S~AI~~   79 (96)
T d1p3da1          71 VVVSSAIKD   79 (96)
T ss_dssp             EEECTTSCT
T ss_pred             EEECCCcCC
Confidence            999988743

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=88.73  E-value=0.7  Score=32.83  Aligned_cols=51  Identities=18%  Similarity=0.220  Sum_probs=35.6

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHc--CCeEEEee--cCcchHHHHHHHhCCceEE
Q 024145           15 GKVAIITGGASGIGAMAVELFHEN--GAKVVIAD--VQDKLGEDLADKLGQDVCY   65 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~--G~~V~~~~--r~~~~~~~~~~~~~~~~~~   65 (272)
                      -|++.|.|+||.||.....-+.+.  .++|++..  ++-+.+.+..++.+....+
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~~~L~~q~~ef~Pk~v~   56 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRTNAKRAV   56 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHHHTTCSEEE
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCCHHHHHHHHHhhccccce
Confidence            389999999999999998888776  46776543  3444455555555554443

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=88.73  E-value=1.5  Score=30.77  Aligned_cols=74  Identities=11%  Similarity=0.205  Sum_probs=48.4

Q ss_pred             CCCCcEEEEeCC-CChHHHHHHHHHHHcCC-eEEEeecCcchHHHHHHHh---C--CceEEEEecCCCHHHHHHHHHHHH
Q 024145           12 RLEGKVAIITGG-ASGIGAMAVELFHENGA-KVVIADVQDKLGEDLADKL---G--QDVCYIHCDISNEDEVINLVDTAV   84 (272)
Q Consensus        12 ~l~~k~vlItGa-s~giG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~---~--~~~~~~~~D~~~~~~~~~~~~~~~   84 (272)
                      +++|+.+|=.|+ ||.+|.    ..+++|+ +|+.++.+++..+.+.+.+   +  .++.+++.|..+      ++   .
T Consensus        12 ~~~g~~vlDl~~GtG~~~i----ea~~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~~D~~~------~l---~   78 (152)
T d2esra1          12 YFNGGRVLDLFAGSGGLAI----EAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAER------AI---D   78 (152)
T ss_dssp             CCCSCEEEEETCTTCHHHH----HHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHH------HH---H
T ss_pred             hCCCCeEEEcCCccCHHHH----HHHHhCcceeeeehhchhhhhhhhhhhhhcccccchhhhcccccc------cc---c
Confidence            468888886665 455655    3456786 7999999887765554433   2  468888888532      12   2


Q ss_pred             HHhCCccEEEeCCC
Q 024145           85 SKFGKLDIMYNNAG   98 (272)
Q Consensus        85 ~~~g~id~lv~~ag   98 (272)
                      ......|+++.++.
T Consensus        79 ~~~~~fDiIf~DPP   92 (152)
T d2esra1          79 CLTGRFDLVFLDPP   92 (152)
T ss_dssp             HBCSCEEEEEECCS
T ss_pred             ccccccceeEechh
Confidence            22357899988764

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=88.59  E-value=0.3  Score=34.95  Aligned_cols=35  Identities=20%  Similarity=0.393  Sum_probs=28.9

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCC--eEEEeecCc
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGA--KVVIADVQD   49 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~--~V~~~~r~~   49 (272)
                      .||+++|.|| |..|..+|..|.+.+.  +|+++.+++
T Consensus         1 ~gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            4899999994 6889999999999874  688877654

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=88.40  E-value=0.37  Score=36.89  Aligned_cols=36  Identities=17%  Similarity=0.228  Sum_probs=29.5

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcc
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDK   50 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~   50 (272)
                      ..++|+|.| +|--|..+|..|+++|.+|++..|++.
T Consensus         3 ~~~kV~IiG-aG~aGl~~A~~L~~~G~~v~v~Er~~~   38 (265)
T d2voua1           3 TTDRIAVVG-GSISGLTAALMLRDAGVDVDVYERSPQ   38 (265)
T ss_dssp             CCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCCcEEEEC-cCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            345788888 467888999999999999999987643

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=88.31  E-value=0.48  Score=36.41  Aligned_cols=35  Identities=23%  Similarity=0.328  Sum_probs=30.1

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHH-cCCeEEEee
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHE-NGAKVVIAD   46 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~-~G~~V~~~~   46 (272)
                      .+++||+++|-| .|.+|..+++.|++ .|+.|+.++
T Consensus        27 ~~l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vs   62 (234)
T d1b26a1          27 IDPKKATVAVQG-FGNVGQFAALLISQELGSKVVAVS   62 (234)
T ss_dssp             CCTTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEE
T ss_pred             CCcCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEee
Confidence            368999999997 89999999999986 599988764

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=88.09  E-value=0.25  Score=38.33  Aligned_cols=31  Identities=13%  Similarity=0.260  Sum_probs=27.5

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCCeEEEeecCc
Q 024145           18 AIITGGASGIGAMAVELFHENGAKVVIADVQD   49 (272)
Q Consensus        18 vlItGas~giG~aia~~la~~G~~V~~~~r~~   49 (272)
                      |+|.| +|-.|.++|.+|+++|.+|+++.+++
T Consensus         7 vvIIG-aGi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIG-GGIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            67777 67999999999999999999999865

>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Thermotoga maritima [TaxId: 2336]

Probab=87.85  E-value=1.3  Score=34.62  Aligned_cols=75  Identities=19%  Similarity=0.195  Sum_probs=48.8

Q ss_pred             cEEEEeCCCC-hHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh-----CCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024145           16 KVAIITGGAS-GIGAMAVELFHENGAKVVIADVQDKLGEDLADKL-----GQDVCYIHCDISNEDEVINLVDTAVSKFGK   89 (272)
Q Consensus        16 k~vlItGas~-giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (272)
                      ++++-.|+++ -|+.++++   ...++|++++.+++..+-..+..     ..++.++..|+.+.         .....++
T Consensus       112 ~~vld~g~GsG~i~~~la~---~~~~~v~a~Dis~~Al~~A~~Na~~~~~~~~~~i~~~~~~~~---------~~~~~~~  179 (271)
T d1nv8a_         112 KTVADIGTGSGAIGVSVAK---FSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP---------FKEKFAS  179 (271)
T ss_dssp             CEEEEESCTTSHHHHHHHH---HSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG---------GGGGTTT
T ss_pred             cEEEEeeeeeehhhhhhhh---cccceeeechhhhhHHHHHHHHHHHcCCCceeEEeecccccc---------cccccCc
Confidence            4555455444 45555442   35678999999888765544432     24677788888643         2234468


Q ss_pred             ccEEEeCCCCCCC
Q 024145           90 LDIMYNNAGILDR  102 (272)
Q Consensus        90 id~lv~~ag~~~~  102 (272)
                      +|++|.|..+...
T Consensus       180 fDlIVsNPPYI~~  192 (271)
T d1nv8a_         180 IEMILSNPPYVKS  192 (271)
T ss_dssp             CCEEEECCCCBCG
T ss_pred             ccEEEEcccccCc
Confidence            9999999998754

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=87.74  E-value=0.38  Score=33.01  Aligned_cols=35  Identities=17%  Similarity=0.286  Sum_probs=30.5

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcc
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGAKVVIADVQDK   50 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~   50 (272)
                      .|.++|.| +|-||..+|..|.+.|.+|.++.+.+.
T Consensus        26 p~~vvIiG-gG~IG~E~A~~~~~~G~~Vtive~~~~   60 (125)
T d1ojta2          26 PGKLLIIG-GGIIGLEMGTVYSTLGSRLDVVEMMDG   60 (125)
T ss_dssp             CSEEEEES-CSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCeEEEEC-CCHHHHHHHHHhhcCCCEEEEEEeecc
Confidence            47889998 579999999999999999999987653

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=87.60  E-value=0.68  Score=35.25  Aligned_cols=71  Identities=14%  Similarity=0.108  Sum_probs=52.2

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKFGK   89 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (272)
                      -+++++|=.|++.|   ..+..|+++|++|+.++-++...+...+..   +.++.++..|+.+.+.           -+.
T Consensus        40 ~~~~~iLDiGcGtG---~~~~~l~~~~~~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d~~~l~~-----------~~~  105 (251)
T d1wzna1          40 REVRRVLDLACGTG---IPTLELAERGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAF-----------KNE  105 (251)
T ss_dssp             SCCCEEEEETCTTC---HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCC-----------CSC
T ss_pred             CCCCEEEEeCCCCC---ccchhhcccceEEEEEeeccccccccccccccccccchheehhhhhccc-----------ccc
Confidence            35678999999876   346678899999999999988776555443   4578999999866421           136


Q ss_pred             ccEEEeCC
Q 024145           90 LDIMYNNA   97 (272)
Q Consensus        90 id~lv~~a   97 (272)
                      +|.++..-
T Consensus       106 fD~I~~~~  113 (251)
T d1wzna1         106 FDAVTMFF  113 (251)
T ss_dssp             EEEEEECS
T ss_pred             cchHhhhh
Confidence            89887754

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=87.53  E-value=0.29  Score=36.62  Aligned_cols=31  Identities=29%  Similarity=0.385  Sum_probs=27.3

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCCeEEEeecCc
Q 024145           18 AIITGGASGIGAMAVELFHENGAKVVIADVQD   49 (272)
Q Consensus        18 vlItGas~giG~aia~~la~~G~~V~~~~r~~   49 (272)
                      |+|.| +|--|..+|..|+++|.+|+++.++.
T Consensus         8 viViG-aG~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLG-TGITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            67777 78889999999999999999998764

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=87.43  E-value=2.3  Score=27.01  Aligned_cols=69  Identities=19%  Similarity=0.233  Sum_probs=46.8

Q ss_pred             EEEEeCCCChHHH-HHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEe
Q 024145           17 VAIITGGASGIGA-MAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYN   95 (272)
Q Consensus        17 ~vlItGas~giG~-aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~   95 (272)
                      ++-+.| -+|+|. ++|+.|.++|+.|...++......+..++.+..+. ..-|..+.              ...|.+|.
T Consensus         3 ~ihfiG-IgG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~~L~~~Gi~i~-~gh~~~~i--------------~~~d~vV~   66 (89)
T d1j6ua1           3 KIHFVG-IGGIGMSAVALHEFSNGNDVYGSNIEETERTAYLRKLGIPIF-VPHSADNW--------------YDPDLVIK   66 (89)
T ss_dssp             EEEEET-TTSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCCEE-SSCCTTSC--------------CCCSEEEE
T ss_pred             EEEEEe-ECHHHHHHHHHHHHhCCCeEEEEeCCCChhHHHHHHCCCeEE-eeeccccc--------------CCCCEEEE
Confidence            445554 567774 78999999999999999887666555666664332 22233221              26899999


Q ss_pred             CCCCCC
Q 024145           96 NAGILD  101 (272)
Q Consensus        96 ~ag~~~  101 (272)
                      ..++..
T Consensus        67 SsAI~~   72 (89)
T d1j6ua1          67 TPAVRD   72 (89)
T ss_dssp             CTTCCT
T ss_pred             ecCcCC
Confidence            998753

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=87.30  E-value=0.27  Score=38.48  Aligned_cols=37  Identities=16%  Similarity=0.228  Sum_probs=31.1

Q ss_pred             CCcEEEEeCCCChHHHH-----HHHHHHHcCCeEEEeecCcc
Q 024145           14 EGKVAIITGGASGIGAM-----AVELFHENGAKVVIADVQDK   50 (272)
Q Consensus        14 ~~k~vlItGas~giG~a-----ia~~la~~G~~V~~~~r~~~   50 (272)
                      .+++++|+.|=||.|+.     ++..|+++|.+|++++.++.
T Consensus        18 ~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~   59 (279)
T d1ihua2          18 NEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA   59 (279)
T ss_dssp             TSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            56777788779999965     48999999999999998864

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=87.28  E-value=0.39  Score=36.77  Aligned_cols=73  Identities=16%  Similarity=0.059  Sum_probs=54.9

Q ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHH---hCCceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145           12 RLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADK---LGQDVCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus        12 ~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      ...++++|=.|++.|.   ++..|+++|.+|+.++.+++.++...+.   .+.++.++..|+.+.+.           .+
T Consensus        35 ~~~~~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~d~~~~~~-----------~~  100 (246)
T d1y8ca_          35 NLVFDDYLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLNI-----------NR  100 (246)
T ss_dssp             TCCTTEEEEETCTTST---THHHHGGGSSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCCC-----------SC
T ss_pred             CCCCCeEEEEeCcCCH---HHHHHHHhCCccEeeccchhhhhhccccccccCccceeeccchhhhcc-----------cc
Confidence            4567899999998885   6888999999999999998877655443   35578899988865321           13


Q ss_pred             CccEEEeCCC
Q 024145           89 KLDIMYNNAG   98 (272)
Q Consensus        89 ~id~lv~~ag   98 (272)
                      ++|+++...+
T Consensus       101 ~fD~i~~~~~  110 (246)
T d1y8ca_         101 KFDLITCCLD  110 (246)
T ss_dssp             CEEEEEECTT
T ss_pred             cccccceeee
Confidence            7898886543

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=86.92  E-value=1.8  Score=33.41  Aligned_cols=71  Identities=18%  Similarity=0.267  Sum_probs=49.7

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKFGK   89 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (272)
                      ..|+++|=.|+.+|+   ++..+++.|++|+.++.++...+...+..   +-...++..|+.+          . -..++
T Consensus       119 ~~g~~VLDiGcGsG~---l~i~aa~~g~~V~gvDis~~av~~A~~na~~n~~~~~~~~~d~~~----------~-~~~~~  184 (254)
T d2nxca1         119 RPGDKVLDLGTGSGV---LAIAAEKLGGKALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEA----------A-LPFGP  184 (254)
T ss_dssp             CTTCEEEEETCTTSH---HHHHHHHTTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHH----------H-GGGCC
T ss_pred             CccCEEEEcccchhH---HHHHHHhcCCEEEEEECChHHHHHHHHHHHHcCCceeEEeccccc----------c-ccccc
Confidence            578999999999886   23456788999999999998776555433   4456677666421          1 12357


Q ss_pred             ccEEEeCC
Q 024145           90 LDIMYNNA   97 (272)
Q Consensus        90 id~lv~~a   97 (272)
                      +|+++.|.
T Consensus       185 fD~V~ani  192 (254)
T d2nxca1         185 FDLLVANL  192 (254)
T ss_dssp             EEEEEEEC
T ss_pred             cchhhhcc
Confidence            99998763

>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-epi-vancosaminyltransferase GtfA
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=86.71  E-value=1.9  Score=34.33  Aligned_cols=79  Identities=13%  Similarity=0.095  Sum_probs=43.7

Q ss_pred             cEEEEeCCCC-hHH--HHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCC----------------CHHHH
Q 024145           16 KVAIITGGAS-GIG--AMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDIS----------------NEDEV   76 (272)
Q Consensus        16 k~vlItGas~-giG--~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~----------------~~~~~   76 (272)
                      |+++.++||+ .|=  .+++++|+++|++|+++..  +...+..+..+-.+.-+..+..                -...+
T Consensus         2 ril~~~~gt~Ghi~P~laLA~~L~~rGh~V~~~~~--~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (391)
T d1pn3a_           2 RVLITGCGSRGDTEPLVALAARLRELGADARMCLP--PDYVERCAEVGVPMVPVGRAVRAGAREPGELPPGAAEVVTEVV   79 (391)
T ss_dssp             EEEEEEESSHHHHHHHHHHHHHHHHTTCEEEEEEC--GGGHHHHHHHTCCEEECSSCSSGGGSCTTCCCTTCGGGHHHHH
T ss_pred             EEEEEcCCChhHHHHHHHHHHHHHHCCCEEEEEEC--hhhHhHHHHCCCeEEECCccHHHHhhChhhhhHHHHHHHHHHH
Confidence            3445566663 332  7899999999999988763  2233444444322222221111                02334


Q ss_pred             HHHHHHHHHHhCCccEEEeC
Q 024145           77 INLVDTAVSKFGKLDIMYNN   96 (272)
Q Consensus        77 ~~~~~~~~~~~g~id~lv~~   96 (272)
                      +..++.+.+....+|.+|..
T Consensus        80 ~~~~~~l~~~~~~~D~vi~~   99 (391)
T d1pn3a_          80 AEWFDKVPAAIEGCDAVVTT   99 (391)
T ss_dssp             HHHHHHHHHHHTTCSEEEEE
T ss_pred             HHHHHHHHHHhcCCCeEEEc
Confidence            55555666655578888764

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=86.70  E-value=0.32  Score=36.76  Aligned_cols=34  Identities=26%  Similarity=0.443  Sum_probs=29.8

Q ss_pred             CcEEEEeCCCChHHH-----HHHHHHHHcCCeEEEeecC
Q 024145           15 GKVAIITGGASGIGA-----MAVELFHENGAKVVIADVQ   48 (272)
Q Consensus        15 ~k~vlItGas~giG~-----aia~~la~~G~~V~~~~r~   48 (272)
                      ||++.|+|+-||.|+     +++..|+++|.+|.+++-+
T Consensus         2 ~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D   40 (237)
T d1g3qa_           2 GRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGD   40 (237)
T ss_dssp             CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence            689999999999994     6788899999999999854

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=86.56  E-value=1.4  Score=29.46  Aligned_cols=35  Identities=14%  Similarity=0.244  Sum_probs=27.0

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHH---cCCeEEEeecCcc
Q 024145           15 GKVAIITGGASGIGAMAVELFHE---NGAKVVIADVQDK   50 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~---~G~~V~~~~r~~~   50 (272)
                      .|+++|.|| |.+|..+|..|.+   +|.+|.++.|.+.
T Consensus        20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~~   57 (117)
T d1aoga2          20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGEM   57 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSSS
T ss_pred             CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccch
Confidence            478999996 8999999976655   4567988887543

>d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: SGNH hydrolase
family: YxiM C-terminal domain-like
domain: Hypothetical protein YxiM
species: Bacillus subtilis [TaxId: 1423]

Probab=86.19  E-value=2.2  Score=31.12  Aligned_cols=85  Identities=9%  Similarity=0.176  Sum_probs=42.6

Q ss_pred             CCCcEEEEeCCCCh-------------HHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHH
Q 024145           13 LEGKVAIITGGASG-------------IGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINL   79 (272)
Q Consensus        13 l~~k~vlItGas~g-------------iG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   79 (272)
                      +++|++++.|-|--             -+.-+.+.|-..+.+|+=.+............                   ..
T Consensus         1 ~~~~ti~~~GDS~~~g~~~~~~~~~~Gw~~~L~~~l~~~~~~v~N~gi~G~t~~~~~~~-------------------~~   61 (208)
T d2o14a2           1 VTNRTIYVGGDSTVCNYYPLNSSKQAGWGQMLPHYIDKHTFQVRNMASGGQIARGFRND-------------------GQ   61 (208)
T ss_dssp             CCCCEEEEEECTTTSCCSSTTTCSBCCHHHHGGGTSCTTTCEEEECCCTTCCHHHHHHS-------------------SH
T ss_pred             CCCCEEEEEEcccccCcCCCCCCCCCCHHHHHHHHhCCCceEEEeCeechhhhccHhhh-------------------hh
Confidence            47899999998833             33344444434455554333322221111110                   01


Q ss_pred             HHHHHHHhCCccEEEeCCCCCCCCCCCCCCCCHHHHHHH
Q 024145           80 VDTAVSKFGKLDIMYNNAGILDRSFGSILDTPKSDLERL  118 (272)
Q Consensus        80 ~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~  118 (272)
                      +.++.....+.|++|...|....  ......+.+.+.+.
T Consensus        62 ~~~~~~~~~~~D~vvi~~G~ND~--~~~~~~~~~~~~~~   98 (208)
T d2o14a2          62 LEAILKYIKPGDYFMLQLGINDT--NPKHKESEAEFKEV   98 (208)
T ss_dssp             HHHHHTTCCTTCEEEEECCTGGG--CGGGCCCHHHHHHH
T ss_pred             HHHHHHhcCCCCEEEEEcCCCcc--cccccccHHHHHHH
Confidence            23333444567999998887653  22233455554443

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=85.92  E-value=4.5  Score=28.85  Aligned_cols=74  Identities=16%  Similarity=0.253  Sum_probs=39.1

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHc-----CCeEEEeecCcchHHHHHHHh-------CCceEEEEecCCCHHHHHHHHHHH
Q 024145           16 KVAIITGGASGIGAMAVELFHEN-----GAKVVIADVQDKLGEDLADKL-------GQDVCYIHCDISNEDEVINLVDTA   83 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~-----G~~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~~   83 (272)
                      -++.|.||++.....++..++.+     +.++++.+.++++++...+.+       +.........  |..+   .    
T Consensus         4 ~KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~~--d~~e---a----   74 (167)
T d1u8xx1           4 FSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATT--DPEE---A----   74 (167)
T ss_dssp             EEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEES--CHHH---H----
T ss_pred             ceEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEecC--Chhh---c----
Confidence            35666677543222233333332     247999999988765333221       3333333221  2211   1    


Q ss_pred             HHHhCCccEEEeCCCCCC
Q 024145           84 VSKFGKLDIMYNNAGILD  101 (272)
Q Consensus        84 ~~~~g~id~lv~~ag~~~  101 (272)
                         ..+-|++|..+|...
T Consensus        75 ---l~~AD~Vvitag~~~   89 (167)
T d1u8xx1          75 ---FTDVDFVMAHIRVGK   89 (167)
T ss_dssp             ---HSSCSEEEECCCTTH
T ss_pred             ---cCCCCEEEECCCcCC
Confidence               237899999998743

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=85.45  E-value=2.2  Score=30.87  Aligned_cols=73  Identities=19%  Similarity=0.189  Sum_probs=50.1

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---C--CceEEEEecCCCHHHHHHHHHHHHHHh
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---G--QDVCYIHCDISNEDEVINLVDTAVSKF   87 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~--~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (272)
                      -.|.++|=.|+..|   .++..|++.+.+|+.++.++...+...+..   +  .++.+++.|..+          .....
T Consensus        32 ~~g~~VLDiGcGsG---~~s~~lA~~~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~gda~~----------~~~~~   98 (186)
T d1l3ia_          32 GKNDVAVDVGCGTG---GVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE----------ALCKI   98 (186)
T ss_dssp             CTTCEEEEESCTTS---HHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH----------HHTTS
T ss_pred             CCCCEEEEEECCeE---cccccccccceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEECchhh----------ccccc
Confidence            35778888888766   334456777889999999988776655433   2  578899887421          12233


Q ss_pred             CCccEEEeCCC
Q 024145           88 GKLDIMYNNAG   98 (272)
Q Consensus        88 g~id~lv~~ag   98 (272)
                      ..+|.++.+.+
T Consensus        99 ~~~D~v~~~~~  109 (186)
T d1l3ia_          99 PDIDIAVVGGS  109 (186)
T ss_dssp             CCEEEEEESCC
T ss_pred             CCcCEEEEeCc
Confidence            57999987754

>d1qkia1 c.2.1.3 (A:12-199,A:435-449) Glucose 6-phosphate dehydrogenase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose 6-phosphate dehydrogenase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.15  E-value=1.9  Score=32.12  Aligned_cols=84  Identities=12%  Similarity=0.124  Sum_probs=53.0

Q ss_pred             CCcEEEEeCCCChHHHH-HH---HHHHHcC-----CeEEEeecCcchHHHHHHHh-----------------CCceEEEE
Q 024145           14 EGKVAIITGGASGIGAM-AV---ELFHENG-----AKVVIADVQDKLGEDLADKL-----------------GQDVCYIH   67 (272)
Q Consensus        14 ~~k~vlItGas~giG~a-ia---~~la~~G-----~~V~~~~r~~~~~~~~~~~~-----------------~~~~~~~~   67 (272)
                      ..-+++|.||||.+-+- +.   .+|...|     .+|+.++|++-..+++.+.+                 -.++.++.
T Consensus        19 ~~~t~VIFGatGDLA~RKL~PALf~L~~~g~Lp~~~~Iig~aR~~~s~e~fr~~~~~~~~~~~~~~~~~~~f~~~~~Y~~   98 (203)
T d1qkia1          19 DTHIFIIMGASGDLAKKKIYPTIWWLFRDGLLPENTFIVGYARSRLTVADIRKQSEPFFKATPEEKLKLEDFFARNSYVA   98 (203)
T ss_dssp             CCEEEEEETTTSHHHHHTHHHHHHHHHHTTCSCSSEEEEEEBSSCCSCHHHHHHHSCCTTCCGGGHHHHHHHHTTEECCB
T ss_pred             CCcEEEEECcccHHHHhHHHHHHHHHHHcCCCCCCcEEEEEECCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHhhcccc
Confidence            34579999999999832 22   2334443     57899999775544444332                 23677888


Q ss_pred             ecCCCHHHHHHHHHHHHHHh-C-CccEEEeCC
Q 024145           68 CDISNEDEVINLVDTAVSKF-G-KLDIMYNNA   97 (272)
Q Consensus        68 ~D~~~~~~~~~~~~~~~~~~-g-~id~lv~~a   97 (272)
                      +|.+++++.+++.+.+.+.. + .-..+++.|
T Consensus        99 ~d~~~~~~~~~L~~~l~~~~~~~~~~rifYLA  130 (203)
T d1qkia1          99 GQYDDAASYQRLNSHMNALHLGSQANRLFYLA  130 (203)
T ss_dssp             CCTTCHHHHHHHHHHHHHTTTTTTSEEEEEEC
T ss_pred             CcCCChhhHHHHHHHHHHHhcCCCcceEEEEe
Confidence            88999888888776665422 1 233455554

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=84.84  E-value=0.47  Score=36.83  Aligned_cols=31  Identities=29%  Similarity=0.475  Sum_probs=26.8

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCCeEEEeecCc
Q 024145           18 AIITGGASGIGAMAVELFHENGAKVVIADVQD   49 (272)
Q Consensus        18 vlItGas~giG~aia~~la~~G~~V~~~~r~~   49 (272)
                      |+|.| +|-.|.++|.+|+++|.+|+++.+..
T Consensus         6 vvIIG-aGi~Gls~A~~La~~G~~V~viE~~~   36 (281)
T d2gf3a1           6 VIVVG-AGSMGMAAGYQLAKQGVKTLLVDAFD   36 (281)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            67776 57889999999999999999998754

>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=84.73  E-value=0.36  Score=36.41  Aligned_cols=34  Identities=24%  Similarity=0.323  Sum_probs=29.1

Q ss_pred             cEEEEeCCCChHH-----HHHHHHHHHcCCeEEEeecCc
Q 024145           16 KVAIITGGASGIG-----AMAVELFHENGAKVVIADVQD   49 (272)
Q Consensus        16 k~vlItGas~giG-----~aia~~la~~G~~V~~~~r~~   49 (272)
                      |++.|+++-||.|     .++|..|+++|.+|.+++-+.
T Consensus         2 kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D~   40 (232)
T d1hyqa_           2 RTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADI   40 (232)
T ss_dssp             EEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             EEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            7899999999999     467888999999999987653

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=84.31  E-value=1.4  Score=32.59  Aligned_cols=79  Identities=19%  Similarity=0.238  Sum_probs=57.2

Q ss_pred             cEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Q 024145           16 KVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---GQDVCYIHCDISNEDEVINLVDTAVSKFGKLDI   92 (272)
Q Consensus        16 k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   92 (272)
                      ..+=+|-|+||.-.++.+++ . +.+|++++++++..+...+.+   +.++.+++.+..+...+   +...  ....+|.
T Consensus        26 ~~lD~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~~~~r~~~~~~~f~~~~~~---~~~~--~~~~vdg   98 (192)
T d1m6ya2          26 IILDCTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFL---LKTL--GIEKVDG   98 (192)
T ss_dssp             EEEETTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHH---HHHT--TCSCEEE
T ss_pred             EEEEecCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhccccccccchhHHHhhHHHH---HHHc--CCCCcce
Confidence            44556788888888888877 3 468999999998876665543   56899999988775443   2211  1358999


Q ss_pred             EEeCCCCCC
Q 024145           93 MYNNAGILD  101 (272)
Q Consensus        93 lv~~ag~~~  101 (272)
                      ++..-|++.
T Consensus        99 Il~DlGvSs  107 (192)
T d1m6ya2          99 ILMDLGVST  107 (192)
T ss_dssp             EEEECSCCH
T ss_pred             eeeccchhH
Confidence            999998754

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=84.26  E-value=1.6  Score=32.54  Aligned_cols=76  Identities=20%  Similarity=0.336  Sum_probs=51.7

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---C-CceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---G-QDVCYIHCDISNEDEVINLVDTAVSKFGK   89 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (272)
                      .|.+||-.|+.+|--.++..++.....+|+.++.+++..+...+.+   + .++.++..|..+..          ...+.
T Consensus        75 ~g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~~~~~----------~~~~~  144 (213)
T d1dl5a1          75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGV----------PEFSP  144 (213)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC----------GGGCC
T ss_pred             ccceEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccCchHHcc----------ccccc
Confidence            5679999998887766665555555668999999888766555443   2 46777777764311          11246


Q ss_pred             ccEEEeCCCC
Q 024145           90 LDIMYNNAGI   99 (272)
Q Consensus        90 id~lv~~ag~   99 (272)
                      +|.++.+++.
T Consensus       145 fD~I~~~~~~  154 (213)
T d1dl5a1         145 YDVIFVTVGV  154 (213)
T ss_dssp             EEEEEECSBB
T ss_pred             hhhhhhhccH
Confidence            9999988764

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=83.52  E-value=2.1  Score=31.51  Aligned_cols=73  Identities=15%  Similarity=0.079  Sum_probs=52.0

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHH---hCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADK---LGQDVCYIHCDISNEDEVINLVDTAVSKFGKL   90 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   90 (272)
                      .+.+||=.|++.|.   ++..|++.|++|+.++-++...+...+.   .+..+..+..|..+...          ....+
T Consensus        37 ~~~~ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~~~l~~----------~~~~f  103 (226)
T d1ve3a1          37 KRGKVLDLACGVGG---FSFLLEDYGFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSF----------EDKTF  103 (226)
T ss_dssp             SCCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCS----------CTTCE
T ss_pred             CCCEEEEECCCcch---hhhhHhhhhcccccccccccchhhhhhhhccccccccccccccccccc----------cCcCc
Confidence            34578999998876   5678889999999999988876655443   34567788888776321          11368


Q ss_pred             cEEEeCCCC
Q 024145           91 DIMYNNAGI   99 (272)
Q Consensus        91 d~lv~~ag~   99 (272)
                      |+++.+...
T Consensus       104 D~I~~~~~l  112 (226)
T d1ve3a1         104 DYVIFIDSI  112 (226)
T ss_dssp             EEEEEESCG
T ss_pred             eEEEEecch
Confidence            998887543

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=83.47  E-value=0.33  Score=32.26  Aligned_cols=39  Identities=13%  Similarity=0.205  Sum_probs=30.9

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcc
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDK   50 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~   50 (272)
                      .+++||+|+|.|++ -=|..++..|++.+.+++...|+..
T Consensus        28 ~~f~gK~VlVVG~g-~Sa~dia~~l~~~ak~v~~~~~r~~   66 (107)
T d2gv8a2          28 ELFVGESVLVVGGA-SSANDLVRHLTPVAKHPIYQSLLGG   66 (107)
T ss_dssp             GGGTTCCEEEECSS-HHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred             hhcCCCeEEEECCC-CCHHHHHHHHHHhcCEEEEEEecCc
Confidence            35799999999965 7788899999988888777666543

>d1v71a1 c.79.1.1 (A:6-323) Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c) {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c)
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=83.25  E-value=4  Score=32.06  Aligned_cols=50  Identities=12%  Similarity=-0.004  Sum_probs=32.4

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCeEEEeecCc--chHHHHHHHhCCceEEE
Q 024145           17 VAIITGGASGIGAMAVELFHENGAKVVIADVQD--KLGEDLADKLGQDVCYI   66 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~   66 (272)
                      ..+|+..+|.-|.+++...+..|..++++....  .......+..+.++..+
T Consensus        70 ~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~l~~~Ga~vi~~  121 (318)
T d1v71a1          70 AGVLTFSSGNHAQAIALSAKILGIPAKIIMPLDAPEAKVAATKGYGGQVIMY  121 (318)
T ss_dssp             HCEEECCSSHHHHHHHHHHHHTTCCEEEEEETTCCHHHHHHHHHTTCEEEEE
T ss_pred             ceeeeeccchhhHHHHHhhcccccceeecccccccHHHHHHHHHcCCcEEec
Confidence            458889999999999999999998765543222  22223334445554443

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=83.12  E-value=0.44  Score=36.73  Aligned_cols=32  Identities=16%  Similarity=0.297  Sum_probs=27.4

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCeEEEeecCc
Q 024145           17 VAIITGGASGIGAMAVELFHENGAKVVIADVQD   49 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~~V~~~~r~~   49 (272)
                      .|+|.|| |--|...|..|+++|++|++..+++
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~   33 (347)
T d2ivda1           2 NVAVVGG-GISGLAVAHHLRSRGTDAVLLESSA   33 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             eEEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            4788886 7889999999999999999987654

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=82.73  E-value=3.2  Score=28.27  Aligned_cols=84  Identities=12%  Similarity=0.158  Sum_probs=52.7

Q ss_pred             CCCcEEEEeCCC---ChHHHHHHHHHHHcC-CeEEEeecCcchHH--HH---HHHhCCceEEEEecCCCHHHHHHHHHHH
Q 024145           13 LEGKVAIITGGA---SGIGAMAVELFHENG-AKVVIADVQDKLGE--DL---ADKLGQDVCYIHCDISNEDEVINLVDTA   83 (272)
Q Consensus        13 l~~k~vlItGas---~giG~aia~~la~~G-~~V~~~~r~~~~~~--~~---~~~~~~~~~~~~~D~~~~~~~~~~~~~~   83 (272)
                      ++-|++.|.|+|   +..|..+.+.|.+.| .+|+.+..+.+...  ..   .++++..+....+ ....+.+.++++++
T Consensus         6 f~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~i~G~~~y~sl~dlp~~vDlvvi-~vp~~~~~~~~~~~   84 (129)
T d2csua1           6 FNPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEVQGVKAYKSVKDIPDEIDLAII-VVPKRFVKDTLIQC   84 (129)
T ss_dssp             TSCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEETTEECBSSTTSCSSCCSEEEE-CSCHHHHHHHHHHH
T ss_pred             CCCCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCccccCCeEeecchhhcCCCCceEEE-ecChHHhHHHHHHH
Confidence            567899999999   889999999987766 58888865443211  00   1122222322222 23578888888888


Q ss_pred             HHHhCCcc-EEEeCCCC
Q 024145           84 VSKFGKLD-IMYNNAGI   99 (272)
Q Consensus        84 ~~~~g~id-~lv~~ag~   99 (272)
                      .+.  ++. +++..+|+
T Consensus        85 ~~~--g~~~~vi~s~Gf   99 (129)
T d2csua1          85 GEK--GVKGVVIITAGF   99 (129)
T ss_dssp             HHH--TCCEEEECCCSS
T ss_pred             HHc--CCCEEEEecccc
Confidence            776  455 45555554

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=82.70  E-value=0.64  Score=36.49  Aligned_cols=32  Identities=19%  Similarity=0.273  Sum_probs=26.5

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCC-eEEEeecCc
Q 024145           17 VAIITGGASGIGAMAVELFHENGA-KVVIADVQD   49 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~-~V~~~~r~~   49 (272)
                      .|+|.| +|-+|.++|.+|+++|. +|++++|+.
T Consensus         3 dViIIG-aGi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           3 RIVIIG-AGIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             CEEEEC-CSHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             CEEEEC-cCHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            367777 46899999999999997 599998764

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=82.27  E-value=5.5  Score=27.01  Aligned_cols=77  Identities=17%  Similarity=0.200  Sum_probs=52.2

Q ss_pred             CCcEEEEeCCCC-hHH---------HHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHH
Q 024145           14 EGKVAIITGGAS-GIG---------AMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTA   83 (272)
Q Consensus        14 ~~k~vlItGas~-giG---------~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   83 (272)
                      ..|++||.|+.. -||         .+.+++|.+.|++++++..+++...--.+ ...   -+.++-...+++.++++.-
T Consensus         6 ~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~d-~aD---~lYfePlt~e~v~~Ii~~E   81 (127)
T d1a9xa3           6 DIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPE-MAD---ATYIEPIHWEVVRKIIEKE   81 (127)
T ss_dssp             SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCGG-GSS---EEECSCCCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcChh-hcc---eeeeecCCHHHHHHHHHHh
Confidence            447888888753 444         67788899999999999988775321111 222   3444556788887776643


Q ss_pred             HHHhCCccEEEeCCCC
Q 024145           84 VSKFGKLDIMYNNAGI   99 (272)
Q Consensus        84 ~~~~g~id~lv~~ag~   99 (272)
                           ++|.++...|.
T Consensus        82 -----~pd~il~~~GG   92 (127)
T d1a9xa3          82 -----RPDAVLPTMGG   92 (127)
T ss_dssp             -----CCSEEECSSSH
T ss_pred             -----CcCCeEEEeee
Confidence                 78998877763

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=82.24  E-value=2.3  Score=30.97  Aligned_cols=73  Identities=15%  Similarity=0.125  Sum_probs=50.2

Q ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh---C-CceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145           13 LEGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL---G-QDVCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus        13 l~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      ++++++|=.|++.|  . .+..|+++|++|+.++-++...+...+..   + ..+.+...|+.+..-           -+
T Consensus        29 ~~~grvLDiGcG~G--~-~~~~la~~g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~~~~-----------~~   94 (198)
T d2i6ga1          29 VAPGRTLDLGCGNG--R-NSLYLAANGYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNTLTF-----------DG   94 (198)
T ss_dssp             SCSCEEEEETCTTS--H-HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTTCCC-----------CC
T ss_pred             CCCCcEEEECCCCC--H-HHHHHHHHhhhhccccCcHHHHHHHHHHhhhccccchhhhheecccccc-----------cc
Confidence            46678999998644  4 46788999999999999887766544322   2 347777788765321           13


Q ss_pred             CccEEEeCCCC
Q 024145           89 KLDIMYNNAGI   99 (272)
Q Consensus        89 ~id~lv~~ag~   99 (272)
                      .+|+++.+.-.
T Consensus        95 ~fD~I~~~~~~  105 (198)
T d2i6ga1          95 EYDFILSTVVM  105 (198)
T ss_dssp             CEEEEEEESCG
T ss_pred             cccEEEEeeee
Confidence            68998876643

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.18  E-value=0.87  Score=35.56  Aligned_cols=34  Identities=21%  Similarity=0.294  Sum_probs=27.2

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecC
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQ   48 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~   48 (272)
                      +.++|+|.| +|--|+..|..|+++|++|.+.-++
T Consensus         4 ~~~kViVIG-aG~aGL~aA~~L~~~G~~V~VlEa~   37 (449)
T d2dw4a2           4 KTGKVIIIG-SGVSGLAAARQLQSFGMDVTLLEAR   37 (449)
T ss_dssp             CCCEEEEEC-CBHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHhCCCCEEEEeCC
Confidence            345688888 4677899999999999999987543

>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Succinyl-CoA synthetase domains
family: Succinyl-CoA synthetase domains
domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=82.15  E-value=6.3  Score=27.56  Aligned_cols=80  Identities=15%  Similarity=0.260  Sum_probs=52.5

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCC-----ceEEEEecCCCHHHHHHHHHHHHHHhC
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQ-----DVCYIHCDISNEDEVINLVDTAVSKFG   88 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (272)
                      +|+++.|.+.+||.|.-++..+.+.|.++.-  -+++..+++.+.++.     +..-+..+ .+.+...+.++.+.+. +
T Consensus         2 ~G~rvaiit~sGG~~~l~aD~~~~~Gl~l~~--l~~~t~~~L~~~lp~~~~~~NPlD~~~~-~~~~~~~~~l~~~~~d-~   77 (163)
T d2csua3           2 RGNKVAIMTNAGGPGVLTADELDKRGLKLAT--LEEKTIEELRSFLPPMAAVKNPVDMIAS-ARGEDYYRTAKLLLQD-P   77 (163)
T ss_dssp             SSSEEEEEESCHHHHHHHHHHHHTTTCEECC--CCHHHHHHHHHHSCTTCEESSEEECCTT-CCHHHHHHHHHHHHHS-T
T ss_pred             CCCeEEEEECChHHHHHHHHHHHHcCCccCC--CCHHHHHHHHHhCCCcccCCCcccccCC-CCHHHHHHHHHHHHcC-C
Confidence            6889999999999999999999999976532  233444445554542     22222233 3667777777666554 4


Q ss_pred             CccEEEeCC
Q 024145           89 KLDIMYNNA   97 (272)
Q Consensus        89 ~id~lv~~a   97 (272)
                      .+|.++...
T Consensus        78 ~vd~v~v~~   86 (163)
T d2csua3          78 NVDMLIAIC   86 (163)
T ss_dssp             TCSEEEEEE
T ss_pred             CcCEEEEee
Confidence            688765443

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=82.13  E-value=0.68  Score=33.23  Aligned_cols=31  Identities=16%  Similarity=0.115  Sum_probs=25.0

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEe
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIA   45 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~   45 (272)
                      +++.++|.| +|.+|..++..|.+.|.++.++
T Consensus         2 ~~~~VvIIG-gG~~G~e~A~~l~~~g~~v~v~   32 (185)
T d1q1ra1           2 ANDNVVIVG-TGLAGVEVAFGLRASGWEGNIR   32 (185)
T ss_dssp             CSCEEEEEC-CSHHHHHHHHHHHHTTCCSEEE
T ss_pred             CCCCEEEEC-CcHHHHHHHHHHHHcCCceEEE
Confidence            467888888 6799999999999999875443

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=81.80  E-value=2.3  Score=31.88  Aligned_cols=75  Identities=21%  Similarity=0.175  Sum_probs=54.4

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHH---HhC-CceEEEEecCCCHHHHHHHHHHHHHHhCC
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLAD---KLG-QDVCYIHCDISNEDEVINLVDTAVSKFGK   89 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~---~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (272)
                      .|.+||..|+.+|--.++.-++.  |.+|+.+.++++..+...+   +.+ .++.++..|..+-          ....++
T Consensus        78 ~g~~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd~~~g----------~~~~~p  145 (215)
T d1jg1a_          78 PGMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKG----------FPPKAP  145 (215)
T ss_dssp             TTCCEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC----------CGGGCC
T ss_pred             ccceEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHcCCceeEEEECccccC----------CcccCc
Confidence            56789999999888888877776  4679999998766554443   334 5799999988541          122357


Q ss_pred             ccEEEeCCCCC
Q 024145           90 LDIMYNNAGIL  100 (272)
Q Consensus        90 id~lv~~ag~~  100 (272)
                      .|.++.+++..
T Consensus       146 fD~Iiv~~a~~  156 (215)
T d1jg1a_         146 YDVIIVTAGAP  156 (215)
T ss_dssp             EEEEEECSBBS
T ss_pred             ceeEEeecccc
Confidence            99999888764

>d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermus thermophilus [TaxId: 274]

Probab=81.56  E-value=2.2  Score=31.13  Aligned_cols=74  Identities=9%  Similarity=0.070  Sum_probs=50.2

Q ss_pred             CCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC
Q 024145           23 GASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMYNNAGILDR  102 (272)
Q Consensus        23 as~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~  102 (272)
                      ||=|-|-+ .+.+++++.+|++++|++...+...+....++.+++.+.++.+..   +...  ..+.+|.++..-|++..
T Consensus        25 ~T~G~GGh-s~~iL~~~~~viaiD~D~~ai~~a~~~~~~~~~~~~~~f~~~~~~---l~~~--~~~~vdgIl~DLGvSs~   98 (182)
T d1wg8a2          25 ATLGGAGH-ARGILERGGRVIGLDQDPEAVARAKGLHLPGLTVVQGNFRHLKRH---LAAL--GVERVDGILADLGVSSF   98 (182)
T ss_dssp             TTCTTSHH-HHHHHHTTCEEEEEESCHHHHHHHHHTCCTTEEEEESCGGGHHHH---HHHT--TCSCEEEEEEECSCCHH
T ss_pred             eCCCCcHH-HHHHhcccCcEEEEhhhhhHHHHHhhccccceeEeehHHHHHHHH---HHHc--CCCccCEEEEEccCCHH
Confidence            44444444 455666777999999999876655544456899999888875543   2221  13579999999987643

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=81.47  E-value=1.2  Score=34.13  Aligned_cols=35  Identities=31%  Similarity=0.480  Sum_probs=29.5

Q ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHc-CCeEEEee
Q 024145           11 KRLEGKVAIITGGASGIGAMAVELFHEN-GAKVVIAD   46 (272)
Q Consensus        11 ~~l~~k~vlItGas~giG~aia~~la~~-G~~V~~~~   46 (272)
                      .+++||+++|-|- |.+|..+++.|+++ |+.|+.++
T Consensus        28 ~~l~g~~v~IqGf-GnVG~~~a~~L~~~~G~kvv~vs   63 (239)
T d1gtma1          28 DTLKGKTIAIQGY-GNAGYYLAKIMSEDFGMKVVAVS   63 (239)
T ss_dssp             SCSTTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEEE
T ss_pred             CCcCCCEEEEECC-CHHHHHHHHHHHHhcCcceeecc
Confidence            3589999999995 78999999999875 88887654

>d1peya_ c.23.1.1 (A:) Sporulation response regulator Spo0F {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Sporulation response regulator Spo0F
species: Bacillus subtilis [TaxId: 1423]

Probab=80.88  E-value=5.7  Score=26.23  Aligned_cols=81  Identities=16%  Similarity=0.227  Sum_probs=52.1

Q ss_pred             CcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEE
Q 024145           15 GKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFGKLDIMY   94 (272)
Q Consensus        15 ~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv   94 (272)
                      ||++||.--...+-..+.+.|.+.|++|..+....+..+ ..++....+.+....+-+.+.+ +++.++++....+-+++
T Consensus         1 NkrILvVDD~~~~~~~l~~~L~~~g~~v~~a~~g~eal~-~~~~~~~dlillD~~mP~~~G~-el~~~lr~~~~~~pvi~   78 (119)
T d1peya_           1 NEKILIVDDQSGIRILLNEVFNKEGYQTFQAANGLQALD-IVTKERPDLVLLDMKIPGMDGI-EILKRMKVIDENIRVII   78 (119)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHH-HHHHHCCSEEEEESCCTTCCHH-HHHHHHHHHCTTCEEEE
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCEEEEeCCHHHHHH-HHHhCCCCEEEEeccCCCCCHH-HHHHHHHHhCCCCcEEE
Confidence            578999999999999999999999999886554333333 3333333444444444344433 45667777666666666


Q ss_pred             eCC
Q 024145           95 NNA   97 (272)
Q Consensus        95 ~~a   97 (272)
                      ..+
T Consensus        79 lt~   81 (119)
T d1peya_          79 MTA   81 (119)
T ss_dssp             EES
T ss_pred             Eec
Confidence            554

>d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methylase EF2452
species: Enterococcus faecalis [TaxId: 1351]

Probab=80.84  E-value=2.5  Score=30.63  Aligned_cols=78  Identities=10%  Similarity=0.140  Sum_probs=52.0

Q ss_pred             CCCCcEEEEe-CCCChHHHHHHHHHHHcCC-eEEEeecCcchHHHHHHHh---C--CceEEEEecCCCHHHHHHHHHHHH
Q 024145           12 RLEGKVAIIT-GGASGIGAMAVELFHENGA-KVVIADVQDKLGEDLADKL---G--QDVCYIHCDISNEDEVINLVDTAV   84 (272)
Q Consensus        12 ~l~~k~vlIt-Gas~giG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~---~--~~~~~~~~D~~~~~~~~~~~~~~~   84 (272)
                      .+.|+++|=. .|||.+|.+    .+++|+ +|+.++.+.+..+.+.+.+   +  .++.++..|+.+      ++.+..
T Consensus        39 ~~~~~~vLDlfaGsG~~g~e----a~srGa~~v~~ve~~~~a~~~~~~N~~~~~~~~~~~i~~~D~~~------~l~~~~  108 (182)
T d2fhpa1          39 YFDGGMALDLYSGSGGLAIE----AVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANR------ALEQFY  108 (182)
T ss_dssp             CCSSCEEEETTCTTCHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHH------HHHHHH
T ss_pred             hcCCCEEEEcccccccccce----eeecchhHHHHHHHHHHHHHHHHHHhhhhhcccccccccccchh------hhhhhc
Confidence            4577777754 556778875    455887 5999999887766555433   2  368888888732      344444


Q ss_pred             HHhCCccEEEeCCCC
Q 024145           85 SKFGKLDIMYNNAGI   99 (272)
Q Consensus        85 ~~~g~id~lv~~ag~   99 (272)
                      .....+|+++..+.+
T Consensus       109 ~~~~~fDlIflDPPY  123 (182)
T d2fhpa1         109 EEKLQFDLVLLDPPY  123 (182)
T ss_dssp             HTTCCEEEEEECCCG
T ss_pred             ccCCCcceEEechhh
Confidence            444579999887753

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=80.67  E-value=0.71  Score=35.92  Aligned_cols=33  Identities=27%  Similarity=0.373  Sum_probs=28.6

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcc
Q 024145           17 VAIITGGASGIGAMAVELFHENGAKVVIADVQDK   50 (272)
Q Consensus        17 ~vlItGas~giG~aia~~la~~G~~V~~~~r~~~   50 (272)
                      .|+|.||+ -.|..+|..|++.|.+|+++.++++
T Consensus         4 ~V~IvGaG-p~Gl~~A~~L~~~G~~v~vlE~~~~   36 (292)
T d1k0ia1           4 QVAIIGAG-PSGLLLGQLLHKAGIDNVILERQTP   36 (292)
T ss_dssp             SEEEECCS-HHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred             CEEEECcC-HHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            47888865 8999999999999999999988753

>d1h9aa1 c.2.1.3 (A:1-181,A:413-426) Glucose 6-phosphate dehydrogenase, N-terminal domain {Leuconostoc mesenteroides [TaxId: 1245]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose 6-phosphate dehydrogenase, N-terminal domain
species: Leuconostoc mesenteroides [TaxId: 1245]

Probab=80.57  E-value=3.3  Score=30.49  Aligned_cols=41  Identities=15%  Similarity=0.182  Sum_probs=25.7

Q ss_pred             EEEEeCCCChHHHH-H---HHHHHHcC-----CeEEEeecCcchHHHHHH
Q 024145           17 VAIITGGASGIGAM-A---VELFHENG-----AKVVIADVQDKLGEDLAD   57 (272)
Q Consensus        17 ~vlItGas~giG~a-i---a~~la~~G-----~~V~~~~r~~~~~~~~~~   57 (272)
                      .++|.||||.+-+- +   ..+|...|     .+|+.++|++-..+++.+
T Consensus         7 ~lVIFGaTGDLa~RKL~PAL~~L~~~g~lp~~~~Iig~aR~~~~~e~f~~   56 (195)
T d1h9aa1           7 LVTFFGGTGDLAKRKLYPSVFNLYKKGYLQKHFAIVGTARQALNDDEFKQ   56 (195)
T ss_dssp             EEEEETTTSHHHHHTHHHHHHHHHHTTSSCSSEEEEEEESSCCCHHHHHH
T ss_pred             EEEEECcccHHHHhHHHHHHHHHHHcCCCCCCCEEEEEECCcCcHHHHHH
Confidence            45688999999842 1   22233333     468889998765555443

>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Clostridium pasteurianum [TaxId: 1501]

Probab=80.51  E-value=0.54  Score=36.44  Aligned_cols=34  Identities=24%  Similarity=0.412  Sum_probs=27.9

Q ss_pred             cEEEEeCCCChHHH-----HHHHHHHHcCCeEEEeecCcc
Q 024145           16 KVAIITGGASGIGA-----MAVELFHENGAKVVIADVQDK   50 (272)
Q Consensus        16 k~vlItGas~giG~-----aia~~la~~G~~V~~~~r~~~   50 (272)
                      |++.|+| =||.|+     .++..|++.|.+|.+++.++.
T Consensus         2 r~Iai~g-KGGvGKTT~a~nLA~~LA~~G~rVllID~D~q   40 (269)
T d1cp2a_           2 RQVAIYG-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPK   40 (269)
T ss_dssp             EEEEEEE-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECTT
T ss_pred             CEEEEEC-CCcCCHHHHHHHHHHHHHhCCCcEEEEecCCC
Confidence            5778897 888885     567789999999999998753

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=80.44  E-value=2.4  Score=32.01  Aligned_cols=73  Identities=19%  Similarity=0.111  Sum_probs=50.8

Q ss_pred             CCcEEEEeCCCChHHHHHHHHHHHcCCeEEEeecCcchHHHHHHHh--CCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Q 024145           14 EGKVAIITGGASGIGAMAVELFHENGAKVVIADVQDKLGEDLADKL--GQDVCYIHCDISNEDEVINLVDTAVSKFGKLD   91 (272)
Q Consensus        14 ~~k~vlItGas~giG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   91 (272)
                      .|.+||-.|+.+|--.+   .|++.+.+|+.+.++++..+...+..  ..++.++..|..+-          ....+++|
T Consensus        70 ~g~~VLdIG~GsGy~ta---~La~l~~~V~aiE~~~~~~~~A~~~~~~~~nv~~~~~d~~~g----------~~~~~pfD  136 (224)
T d1vbfa_          70 KGQKVLEIGTGIGYYTA---LIAEIVDKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLG----------YEEEKPYD  136 (224)
T ss_dssp             TTCEEEEECCTTSHHHH---HHHHHSSEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGC----------CGGGCCEE
T ss_pred             ccceEEEecCCCCHHHH---HHHHHhcccccccccHHHHHHHHHHHhcccccccccCchhhc----------chhhhhHH
Confidence            56789999998885444   45556779999999887766555443  24788888887431          11235789


Q ss_pred             EEEeCCCC
Q 024145           92 IMYNNAGI   99 (272)
Q Consensus        92 ~lv~~ag~   99 (272)
                      .++.+++.
T Consensus       137 ~Iiv~~a~  144 (224)
T d1vbfa_         137 RVVVWATA  144 (224)
T ss_dssp             EEEESSBB
T ss_pred             HHHhhcch
Confidence            99888764