Query 024148
Match_columns 272
No_of_seqs 21 out of 23
Neff 2.1
Searched_HMMs 13730
Date Mon Mar 25 03:13:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024148.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/024148hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1icha_ a.77.1.2 (A:) Tumor ne 65.7 2.2 0.00016 28.9 3.0 35 211-245 2-36 (87)
2 d2efla1 a.238.1.4 (A:1-288) Fo 37.8 70 0.0051 23.4 20.8 57 73-129 107-163 (288)
3 d3efza1 a.118.7.1 (A:46-268) 1 35.2 5.8 0.00042 32.5 1.2 42 196-251 1-42 (223)
4 d1wjta_ a.48.3.1 (A:) Transcri 34.2 20 0.0015 25.6 4.0 65 186-254 9-83 (103)
5 d1hcia1 a.7.1.1 (A:272-396) al 28.1 90 0.0066 22.2 6.8 82 110-194 38-125 (125)
6 d1cuna2 a.7.1.1 (A:116-219) Sp 28.1 46 0.0033 21.5 4.7 17 109-125 1-17 (104)
7 d2efka1 a.238.1.4 (A:10-288) C 27.5 1.1E+02 0.0077 22.3 21.3 53 73-125 98-150 (279)
8 d1w85a_ c.36.1.11 (A:) Pyruvat 24.7 43 0.0032 28.2 5.1 52 170-221 293-345 (365)
9 d1umda_ c.36.1.11 (A:) Branche 22.3 37 0.0027 28.5 4.1 51 170-220 292-343 (362)
10 d1zkea1 a.30.6.1 (A:1-79) Hypo 21.3 22 0.0016 25.6 2.1 22 225-250 2-23 (79)
11 d2ozla1 c.36.1.11 (A:1-361) E1 20.6 38 0.0028 28.4 3.8 51 170-220 288-339 (361)
No 1
>d1icha_ a.77.1.2 (A:) Tumor necrosis factor receptor-1 death domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=65.68 E-value=2.2 Score=28.89 Aligned_cols=35 Identities=26% Similarity=0.433 Sum_probs=31.3
Q ss_pred hHHHHhhhccCcchHHhhhhhhccchhHhhhhhhh
Q 024148 211 CELRKLLDEVSPKNFERINKLLVVKDEEIHKLKDE 245 (272)
Q Consensus 211 ~El~kil~evspkn~e~inkll~~kD~eIakLrde 245 (272)
.||..|-++|+|.++..+-.-|.+.+.+|..++.+
T Consensus 2 ~~l~~va~~v~~~~Wk~lar~LGls~~~i~~I~~~ 36 (87)
T d1icha_ 2 ATLYAVVENVPPLRWKEFVKRLGLSDHEIDRLELQ 36 (87)
T ss_dssp HHHHHHHHHSCSTTHHHHHHHHTCCHHHHHHHHHH
T ss_pred hHHHHHHHHCChHHHHHHHHHhCcCHHHHHHHHHH
Confidence 47889999999999999999999999999876543
No 2
>d2efla1 a.238.1.4 (A:1-288) Formin-binding protein 1, FNBP1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=37.75 E-value=70 Score=23.37 Aligned_cols=57 Identities=19% Similarity=0.119 Sum_probs=44.4
Q ss_pred HHHHHHhhchHHHHHHHHHHHhhhhhhhhhhhhhHHHHHHHhhhHhhhHHHHHHhhH
Q 024148 73 QEAEMKAKNMEDEICKLQKTLEERNGRLQASACTAEKYLMQLDGLRSQLAATKATAD 129 (272)
Q Consensus 73 k~aE~kak~ME~Ei~kLqK~Leek~eQL~as~~stEkyl~eLD~lRSQLs~TqATAe 129 (272)
+..+...|.+.+++.++++.+.+....+..+-..-.+-.+|++.++.++...+.-..
T Consensus 107 ~~~~~~~K~~~~~~~k~~k~~~~~~~~l~k~k~~Y~~~~~e~e~~~~~~~~~~~~~~ 163 (288)
T d2efla1 107 QELKQERKSNFHDGRKAQQHIETCWKQLESSKRRFERDCKEADRAQQYFEKMDADIN 163 (288)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccc
Confidence 556677788999999999999998888888776666667888888888776554333
No 3
>d3efza1 a.118.7.1 (A:46-268) 14-3-3 protein cgd1_2980 {Cryptosporidium parvum [TaxId: 5807]}
Probab=35.15 E-value=5.8 Score=32.51 Aligned_cols=42 Identities=19% Similarity=0.358 Sum_probs=28.5
Q ss_pred HHHHHHHHHhcCCchhHHHHhhhccCcchHHhhhhhhccchhHhhhhhhhhHHHhh
Q 024148 196 QDIMQTIAKAGVNKDCELRKLLDEVSPKNFERINKLLVVKDEEIHKLKDEIKIMSA 251 (272)
Q Consensus 196 ~dIm~Avakag~~~d~El~kil~evspkn~e~inkll~~kD~eIakLrdeirimSa 251 (272)
.|+|.++...|..-++|.|++|+ |.=||. |...|.-+|||+.
T Consensus 1 ~d~~k~~~e~~~~~~~eeRnLLs-vayKn~-------------ig~rR~s~R~i~s 42 (223)
T d3efza1 1 KDVIKVLTESSDFRDNSLILLLA-GSLRNR-------------VTSIRNSLKSIKS 42 (223)
T ss_dssp CHHHHHHTC-----CCHHHHHHH-HHHHHH-------------HHHHHHHHHHHHH
T ss_pred CcHHHHHHHcCCccchHHHHHHH-HHHhhh-------------ccchHHHHHHHHH
Confidence 38999999999999999999987 444543 5677777777765
No 4
>d1wjta_ a.48.3.1 (A:) Transcription elongation factor S-II protein 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=34.18 E-value=20 Score=25.65 Aligned_cols=65 Identities=20% Similarity=0.397 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCchhHHHHhhhccCcchHHh---------hhhhhc-cchhHhhhhhhhhHHHhhhcc
Q 024148 186 QLKDEVFRIEQDIMQTIAKAGVNKDCELRKLLDEVSPKNFER---------INKLLV-VKDEEIHKLKDEIKIMSAHWK 254 (272)
Q Consensus 186 QLKDeVlriE~dIm~Avakag~~~d~El~kil~evspkn~e~---------inkll~-~kD~eIakLrdeirimSaHW~ 254 (272)
-+.|||++|-..|.+++...-...-.++++.|+.+++ +++- +|+|.- ..|++|..+-.+| =-.|+
T Consensus 9 ~~eeei~~i~k~L~~~~~~~~~~~vl~~L~~L~~~~i-t~e~L~~T~IGk~Vn~LrK~~~~~~v~~lAk~L---v~~WK 83 (103)
T d1wjta_ 9 GLEEELLRIAKKLEKMVSRKKTEGALDLLKKLNSCQM-SIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVL---IKNWK 83 (103)
T ss_dssp CSHHHHHHHHHHHHHHHHTTCCSSHHHHHHHHHTSCC-CHHHHHHTCHHHHHHHHHHHCCCSHHHHHHHHH---HHHHH
T ss_pred cHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHcCCC-CHHHHHhCCccHhHHHHHccCCCHHHHHHHHHH---HHHHH
Confidence 3568999999999999976666677799999988765 6653 466654 3567777765443 34565
No 5
>d1hcia1 a.7.1.1 (A:272-396) alpha-actinin {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.08 E-value=90 Score=22.18 Aligned_cols=82 Identities=12% Similarity=0.103 Sum_probs=56.0
Q ss_pred HHHHhhhHhhhHHHHHHhhHhhHHhHHHHHHHHHHHHhhhhhhhchhh------hhhhHhhhhHHHHHhHHHHHhhhhhh
Q 024148 110 YLMQLDGLRSQLAATKATADASAASAQSAQLQCLALVKELDEKNSSLK------EHEDRVTRLGQQLDNLQKDLQARESS 183 (272)
Q Consensus 110 yl~eLD~lRSQLs~TqATAeaSAaSAqsaqlqCl~L~keL~eK~~sLk------EhE~rV~~lgeQLd~LqK~LqaRE~S 183 (272)
|-+-+.+++.+|..-..--...-.....-.-.+-.+.+.|.-|-.+.. ..++.+..|..--+.|++-...|+..
T Consensus 38 f~~t~~~iq~~l~~f~~yr~~ekp~~~~Ek~~l~~l~~~lqt~~~~~n~~~~~P~~gl~~~di~~~W~~L~~ae~~Re~~ 117 (125)
T d1hcia1 38 PEKTMQAMQKKLEDFRDYRRKHKPPKVQEKCQLEINFNTLQTKLRISNRPAFMPSEGKMVSDIAGAWQRLEQAEKGYEEW 117 (125)
T ss_dssp CCSSSTTTTHHHHHHHHHHHHTHHHHHHHHHHTTTHHHHTTTTTTTTTSCCCCCCGGGCSSSHHHHHHHHHHHHTTHHHH
T ss_pred CCCCHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 456677777777665543333223334444455677888877766654 34688889999999999998888864
Q ss_pred HHHHHHHHHHH
Q 024148 184 QKQLKDEVFRI 194 (272)
Q Consensus 184 QkQLKDeVlri 194 (272)
|++|+.|+
T Consensus 118 ---L~~El~Rl 125 (125)
T d1hcia1 118 ---LLNEIRRL 125 (125)
T ss_dssp ---HHHHHHHH
T ss_pred ---HHHHHhcC
Confidence 88888775
No 6
>d1cuna2 a.7.1.1 (A:116-219) Spectrin alpha chain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=28.06 E-value=46 Score=21.51 Aligned_cols=17 Identities=0% Similarity=0.184 Sum_probs=9.3
Q ss_pred HHHHHhhhHhhhHHHHH
Q 024148 109 KYLMQLDGLRSQLAATK 125 (272)
Q Consensus 109 kyl~eLD~lRSQLs~Tq 125 (272)
||..+++++-+-|.-+.
T Consensus 1 qF~~~~~e~~~Wl~e~~ 17 (104)
T d1cuna2 1 QFVANVEEEEAWINEKM 17 (104)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHH
Confidence 45666666655554443
No 7
>d2efka1 a.238.1.4 (A:10-288) CDC42-interacting protein 4, CIP4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.50 E-value=1.1e+02 Score=22.29 Aligned_cols=53 Identities=19% Similarity=0.075 Sum_probs=40.2
Q ss_pred HHHHHHhhchHHHHHHHHHHHhhhhhhhhhhhhhHHHHHHHhhhHhhhHHHHH
Q 024148 73 QEAEMKAKNMEDEICKLQKTLEERNGRLQASACTAEKYLMQLDGLRSQLAATK 125 (272)
Q Consensus 73 k~aE~kak~ME~Ei~kLqK~Leek~eQL~as~~stEkyl~eLD~lRSQLs~Tq 125 (272)
+..+...|.+.+++.++++.+.+....+.-+-..-.+-..+++.++..+..+.
T Consensus 98 ~~~~~~~k~~~~~~~~~~k~l~~~~~~~~k~k~~y~~~~~e~e~~~~~~~~~~ 150 (279)
T d2efka1 98 QEMKQERKMHFQEGRRAQQQLENGFKQLENSKRKFERDCREAEKAAQTAERLD 150 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 56677788889999999999999888877776666666677777776655443
No 8
>d1w85a_ c.36.1.11 (A:) Pyruvate dehydrogenase E1-alpha, PdhA {Bacillus stearothermophilus [TaxId: 1422]}
Probab=24.66 E-value=43 Score=28.22 Aligned_cols=52 Identities=19% Similarity=0.252 Sum_probs=40.7
Q ss_pred HHhHHHHHhhhhh-hHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHhhhccC
Q 024148 170 LDNLQKDLQARES-SQKQLKDEVFRIEQDIMQTIAKAGVNKDCELRKLLDEVS 221 (272)
Q Consensus 170 Ld~LqK~LqaRE~-SQkQLKDeVlriE~dIm~Avakag~~~d~El~kil~evs 221 (272)
|..+.++|..+.. |+.++++--..++..|-+|+.+|.....+..-.++++|=
T Consensus 293 I~~~~~~L~~~g~~~~~el~~i~~e~~~eV~~A~~~A~~sP~P~~~~l~~~Vy 345 (365)
T d1w85a_ 293 LVRFRKFLEAKGLWSEEEENNVIEQAKEEIKEAIKKADETPKQKVTDLISIMF 345 (365)
T ss_dssp HHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHTSCCCCHHHHHHTSC
T ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHhhhc
Confidence 3444555555554 888888888889999999999999888888888888774
No 9
>d1umda_ c.36.1.11 (A:) Branched-chain alpha-keto acid dehydrogenase, PP module {Thermus thermophilus [TaxId: 274]}
Probab=22.25 E-value=37 Score=28.55 Aligned_cols=51 Identities=14% Similarity=0.184 Sum_probs=36.9
Q ss_pred HHhHHHHHhhhhh-hHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHhhhcc
Q 024148 170 LDNLQKDLQARES-SQKQLKDEVFRIEQDIMQTIAKAGVNKDCELRKLLDEV 220 (272)
Q Consensus 170 Ld~LqK~LqaRE~-SQkQLKDeVlriE~dIm~Avakag~~~d~El~kil~ev 220 (272)
|..+.++|..+.. |..++++.-..|...|-+|+.+|-....+..-.++++|
T Consensus 292 i~~~~~~L~~~g~~se~e~~~i~~ei~~~V~~a~~~A~~~p~P~~~~l~~~V 343 (362)
T d1umda_ 292 IPRFRRFLEARGLWNEEWEEDVREEIRAELERGLKEAEEAGPVPPEWMFEDV 343 (362)
T ss_dssp HHHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTCBCCGGGGGTTS
T ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHhcc
Confidence 4455666666665 88888888888889999999998766555555566655
No 10
>d1zkea1 a.30.6.1 (A:1-79) Hypothetical protein HP1531 {Helicobacter pylori [TaxId: 210]}
Probab=21.31 E-value=22 Score=25.57 Aligned_cols=22 Identities=36% Similarity=0.739 Sum_probs=18.2
Q ss_pred HHhhhhhhccchhHhhhhhhhhHHHh
Q 024148 225 FERINKLLVVKDEEIHKLKDEIKIMS 250 (272)
Q Consensus 225 ~e~inkll~~kD~eIakLrdeirimS 250 (272)
||+|+.+| ..|...++||.|+-
T Consensus 2 fEkId~Il----~~IE~~q~eI~~lL 23 (79)
T d1zkea1 2 FEKIRKIL----ADIEDSQNEIEMLL 23 (79)
T ss_dssp HHHHHHHH----HHHHHHHHHHHHHH
T ss_pred hhHHHHHH----HHHHHHHHHHHHHH
Confidence 89999998 57888899998863
No 11
>d2ozla1 c.36.1.11 (A:1-361) E1-beta subunit of pyruvate dehydrogenase (PP module) {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.60 E-value=38 Score=28.36 Aligned_cols=51 Identities=16% Similarity=0.189 Sum_probs=37.4
Q ss_pred HHhHHHHHhhhh-hhHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHhhhcc
Q 024148 170 LDNLQKDLQARE-SSQKQLKDEVFRIEQDIMQTIAKAGVNKDCELRKLLDEV 220 (272)
Q Consensus 170 Ld~LqK~LqaRE-~SQkQLKDeVlriE~dIm~Avakag~~~d~El~kil~ev 220 (272)
|..+.++|..+. +|..++++.--.|...|-+|+.+|-.......-.++++|
T Consensus 288 i~~~~~~Li~~g~~se~e~~~i~~ei~~~V~~A~~~A~~sp~P~~~~l~~~V 339 (361)
T d2ozla1 288 IMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQFATADPEPPLEELGYHI 339 (361)
T ss_dssp HHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHSCCCCGGGTTCSS
T ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHhCCCcCHHHHHhcc
Confidence 445556666665 488888888888999999999999766666666666655
Done!