Query 024149
Match_columns 272
No_of_seqs 197 out of 1767
Neff 7.8
Searched_HMMs 46136
Date Fri Mar 29 02:27:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024149.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/024149hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0223 Aquaporin (major intri 100.0 9.6E-49 2.1E-53 338.7 17.3 211 46-270 4-215 (238)
2 COG0580 GlpF Glycerol uptake f 100.0 2.7E-46 5.9E-51 322.6 16.9 214 51-270 3-229 (241)
3 PLN00184 aquaporin NIP1; Provi 100.0 6.7E-46 1.5E-50 332.0 19.7 210 49-270 50-262 (296)
4 KOG0224 Aquaporin (major intri 100.0 4.1E-47 8.8E-52 331.0 11.4 216 49-271 28-265 (316)
5 PTZ00016 aquaglyceroporin; Pro 100.0 1.8E-45 3.9E-50 330.0 19.8 214 49-270 46-279 (294)
6 PF00230 MIP: Major intrinsic 100.0 2.4E-46 5.2E-51 325.8 13.6 218 46-270 1-221 (227)
7 PRK05420 aquaporin Z; Provisio 100.0 3.9E-44 8.4E-49 311.8 19.8 209 53-270 2-217 (231)
8 PLN00166 aquaporin TIP2; Provi 100.0 3.6E-44 7.7E-49 315.0 18.3 212 48-270 13-226 (250)
9 PLN00167 aquaporin TIP5; Provi 100.0 1.6E-43 3.4E-48 311.7 20.0 211 48-270 17-229 (256)
10 PLN00026 aquaporin NIP; Provi 100.0 1.2E-43 2.6E-48 316.9 17.4 205 49-270 67-271 (298)
11 PLN00027 aquaporin TIP; Provis 100.0 1.4E-43 2.9E-48 312.2 16.9 211 49-270 16-228 (252)
12 PLN00182 putative aquaporin NI 100.0 8.6E-43 1.9E-47 310.2 19.3 206 49-270 38-243 (283)
13 PLN00183 putative aquaporin NI 100.0 4.2E-41 9.2E-46 298.3 16.7 205 49-270 41-245 (274)
14 cd00333 MIP Major intrinsic pr 100.0 1.7E-40 3.6E-45 289.3 16.5 211 54-270 1-219 (228)
15 TIGR00861 MIP MIP family chann 100.0 9.5E-40 2.1E-44 282.4 15.5 208 58-270 1-210 (216)
16 PLN00182 putative aquaporin NI 99.8 1.9E-19 4.1E-24 160.6 11.9 132 14-156 122-253 (283)
17 cd00333 MIP Major intrinsic pr 99.8 5.7E-19 1.2E-23 153.9 9.3 135 14-154 81-227 (228)
18 PLN00026 aquaporin NIP; Provi 99.8 7.8E-19 1.7E-23 157.3 10.4 131 14-156 151-281 (298)
19 PLN00183 putative aquaporin NI 99.8 1.5E-18 3.2E-23 154.3 11.3 134 14-159 125-258 (274)
20 KOG0223 Aquaporin (major intri 99.8 5.6E-19 1.2E-23 153.3 7.2 137 13-159 90-228 (238)
21 TIGR00861 MIP MIP family chann 99.7 6.8E-18 1.5E-22 146.0 10.2 132 14-151 81-215 (216)
22 PLN00184 aquaporin NIP1; Provi 99.7 4.5E-17 9.8E-22 146.2 11.5 135 14-157 134-273 (296)
23 PRK05420 aquaporin Z; Provisio 99.7 3.8E-16 8.2E-21 136.2 11.8 135 14-157 83-228 (231)
24 PLN00166 aquaporin TIP2; Provi 99.7 1.1E-15 2.4E-20 134.6 13.1 134 14-156 103-236 (250)
25 PLN00027 aquaporin TIP; Provis 99.7 1.3E-15 2.7E-20 134.5 12.4 135 14-157 105-239 (252)
26 PLN00167 aquaporin TIP5; Provi 99.6 2.2E-15 4.8E-20 133.1 11.1 137 14-160 107-243 (256)
27 PTZ00016 aquaglyceroporin; Pro 99.6 2E-15 4.4E-20 135.8 10.7 136 14-158 130-291 (294)
28 PF00230 MIP: Major intrinsic 99.6 2.7E-15 5.8E-20 130.5 10.0 132 14-152 94-227 (227)
29 COG0580 GlpF Glycerol uptake f 99.6 8.4E-15 1.8E-19 127.0 10.8 136 13-156 87-239 (241)
30 KOG0224 Aquaporin (major intri 98.8 7E-09 1.5E-13 91.7 5.7 137 13-156 112-274 (316)
31 PRK10805 formate transporter; 57.0 1.5E+02 0.0032 26.7 12.4 103 93-199 72-183 (285)
32 PF01226 Form_Nir_trans: Forma 53.3 1.6E+02 0.0034 25.9 11.6 109 90-200 58-173 (250)
33 TIGR00790 fnt formate/nitrite 52.0 1.6E+02 0.0035 25.6 11.0 82 116-197 68-157 (239)
34 COG2116 FocA Formate/nitrite f 39.2 2.8E+02 0.0062 24.8 15.8 143 51-199 30-180 (265)
35 PF03033 Glyco_transf_28: Glyc 35.3 12 0.00027 28.8 -0.1 19 110-128 7-25 (139)
36 TIGR02762 TraL_TIGR type IV co 34.5 8.4 0.00018 28.8 -1.1 19 249-267 61-79 (95)
37 PRK12446 undecaprenyldiphospho 30.0 13 0.00028 34.4 -0.9 21 107-127 7-27 (352)
38 PF14034 Spore_YtrH: Sporulati 28.8 1.1E+02 0.0024 23.2 4.1 45 112-156 53-99 (102)
39 COG0730 Predicted permeases [G 25.6 4.3E+02 0.0093 22.8 8.1 30 126-155 68-97 (258)
40 PHA02885 putative interleukin 22.6 45 0.00097 25.4 1.0 21 246-266 49-69 (135)
No 1
>KOG0223 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=9.6e-49 Score=338.74 Aligned_cols=211 Identities=51% Similarity=0.719 Sum_probs=186.5
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCccchhHHHHHHHHHHHHHHHHhcCCCCcccChHHHHHHHH
Q 024149 46 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFL 125 (272)
Q Consensus 46 ~~~~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~v~~~i~~~~~~SGah~NPavTl~~~~ 125 (272)
+.+.++.+|++++||++|++++|++|+++..... .....+.+.+++.+|+.++..+++++++||||+|||||++.++
T Consensus 4 ~~~~~~~~~~~~aEF~~T~~~vf~g~~~~~~~~~---~~~~~~l~~ial~~Gl~v~v~i~~~g~iSGaH~NPAVT~a~~~ 80 (238)
T KOG0223|consen 4 ELLSVSFLRALIAEFLATFLFVFAGCGSVVVNPK---YGGPVGLLGIALAFGLAVFVLVYSTGHISGAHFNPAVTLAFAV 80 (238)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHHhhccc---cCCCchhHHHHHHHHHHHHHHHhhhccccccccCHHHHHHHHH
Confidence 3456788999999999999999999988875543 1223467889999999999999999999999999999999999
Q ss_pred hcCCCccchhHHhhhhhHHHHHHHHHHHHHhccccccccCCCcccccccCCccchhhHHHHHHHHHHHHHHH-hcccccc
Q 024149 126 ARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFS-ATDAKRS 204 (272)
Q Consensus 126 ~g~~~~~~~~~yi~aQ~lGa~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~E~~~T~iL~~~il~-~~~~~~~ 204 (272)
.+++++.++..|+++|++|+++|+.+.+.+.+. .....+.+.+.+.++.+..|+++.|++.||+|++++++ ..|++++
T Consensus 81 ~~~isl~~~~~Y~vaQ~lGa~~g~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~q~~~~E~ilTf~Lv~~v~~~a~d~~~~ 159 (238)
T KOG0223|consen 81 GGKISLFRAVAYIVAQLLGAIAGAALLKVVTPG-QYNRKGLGLTGLAPGLSTGQGLVIEIILTFILVFTVFATATDPRRS 159 (238)
T ss_pred hCCCcHHHhHHHHHHHHHHHHHHHHHHheecCc-ccccCCcceeccCCCCCcchhHHHHHHHHHHHhheeEEEeecCCCc
Confidence 999999999999999999999999999999843 23333445567788899999999999999999999999 7777664
Q ss_pred CCCCCCCcchhHHHHHHHHHHHHHhcCCCcCccchhhhHHHHHHhCCCCCCCcceeEeeccccCCC
Q 024149 205 ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHVRLIYSFHYPKI 270 (272)
Q Consensus 205 ~~~~~~~~~~p~~ig~~v~~~~~~~~~~tG~~lNPAR~~gp~l~~~~~~~w~~~wvy~~g~~~~~~ 270 (272)
.+.|+.||+++.+.+++.+++||++|||||+|||+++.+ .|++|||||+||.+|++
T Consensus 160 -------~~a~l~IG~~v~~~~l~~g~~TG~sMNPArSfGpAvv~~---~w~~hwiYwvgP~~Ga~ 215 (238)
T KOG0223|consen 160 -------ELAPLAIGFSVGLNILAAGPFTGASMNPARSFGPAVVYG---SWDDHWIYWVGPLLGAI 215 (238)
T ss_pred -------ccHHHHHHHHHHHHHHeecCcCcCccCcHHHhhHHHHhc---CCCcEEEEEhhHHHHHH
Confidence 378999999999999999999999999999999999985 59999999999999875
No 2
>COG0580 GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.7e-46 Score=322.55 Aligned_cols=214 Identities=33% Similarity=0.480 Sum_probs=181.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCccchhHHHHHHHHHHHHHHHHhcCCCCcccChHHHHHHHHhcCCC
Q 024149 51 SFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLS 130 (272)
Q Consensus 51 ~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~v~~~i~~~~~~SGah~NPavTl~~~~~g~~~ 130 (272)
+..|++++||+||++|++++++++......+.+....++..+++++|+.+.+.+|+++++||+|+|||||++.++.++++
T Consensus 3 ~~~~~~~aEflGT~~Li~~G~G~~a~~~l~~~~~~~~~~~~i~~~wGl~V~~~iy~~g~iSGaHlNPAVTi~la~~g~fp 82 (241)
T COG0580 3 TLTKKLLAEFLGTFLLIFFGNGSVAAVALKGSKALGGGWLGIALAWGLGVLVAIYAFGGISGAHLNPAVTIALAVRGRFP 82 (241)
T ss_pred cHHHHHHHHHHHHHHHHHhhccHHHHHHhccccccccceeehhHHHHHHHHHHHHhccCcCccccChHHHHHHHHhCCCC
Confidence 34678899999999999999999988776655455667788999999999999999999999999999999999999999
Q ss_pred ccchhHHhhhhhHHHHHHHHHHHHHhccccccccC------CCccccccc-CCccchhhHHHHHHHHHHHHHHHhccccc
Q 024149 131 LTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLA------GGANVVAHG-YTKGDGLGAEIIGTFVLVYTVFSATDAKR 203 (272)
Q Consensus 131 ~~~~~~yi~aQ~lGa~~a~~~~~~l~~~~~~~~~~------~~~~~~~~~-~~~~~~f~~E~~~T~iL~~~il~~~~~~~ 203 (272)
|++++.||++|++||++|+.+++.++ +++++..+ .+..++.|+ .+..++|+.|+++||+|+++++++.|+++
T Consensus 83 ~~~v~~YivAQ~lGA~~ga~l~~~~~-~~~~~~~~~~~~~~~g~~~t~p~~~~~~~~fl~E~v~T~~L~~~Ila~~~~~~ 161 (241)
T COG0580 83 WRKVLPYIVAQVLGAFAGAALLYLLY-YGKILETEGDPLASLGAFSTSPGGYSLGQAFLIEFVGTFVLVLGILALTDDGN 161 (241)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-hhhhHhhcCCchhhccccccCCCcccHHHHHHHHHHHHHHHHHHHHHhhccCc
Confidence 99999999999999999999999999 44443332 234445554 46789999999999999999999887555
Q ss_pred cCCCCCCCcchhHHHHHHHHHHHHHhcCCCcCccchhhhHHHHHHh---C---CCCCCCcceeEeeccccCCC
Q 024149 204 SARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIY---N---KDRGWDDHVRLIYSFHYPKI 270 (272)
Q Consensus 204 ~~~~~~~~~~~p~~ig~~v~~~~~~~~~~tG~~lNPAR~~gp~l~~---~---~~~~w~~~wvy~~g~~~~~~ 270 (272)
. + ..+.|+.||+.+..++++.++.||.++|||||||||+++ + .+.++.|.|+||+||.+|.+
T Consensus 162 ~--~---~~~apl~iGllv~~i~~s~g~~TG~aiNPARdlGprl~~~~~g~~~~~g~~~y~wipvigpiiGa~ 229 (241)
T COG0580 162 A--N---AGFAPLAIGLLVTAIGLSLGPTTGTAINPARDLGPRLAHSLAGWAANKGDSSYFWIPVIGPIVGAI 229 (241)
T ss_pred c--c---ccchHHHHHHHHHHHHHHhcCCCCCccChHHHHHHHHHHHhcCcccCCCCCCeEeeeehHHHHHHH
Confidence 3 1 238999999999999999999999999999999999954 2 12233799999999998864
No 3
>PLN00184 aquaporin NIP1; Provisional
Probab=100.00 E-value=6.7e-46 Score=331.97 Aligned_cols=210 Identities=28% Similarity=0.415 Sum_probs=174.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCccchhHHHHHHHHHHHHHHHHhcCCCCcccChHHHHHHHHhcC
Q 024149 49 SWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARK 128 (272)
Q Consensus 49 ~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~v~~~i~~~~~~SGah~NPavTl~~~~~g~ 128 (272)
+.+++|++++||+|||+|+|++++++......+ ...+++.+++++|+.+++.+++++++||+|+|||||+++++.++
T Consensus 50 ~~~~~~~~~aEfiGTflLvf~g~g~~~~~~~~~---~~~~~~~iai~~Gl~v~~~i~~~g~iSGaH~NPAVTla~al~g~ 126 (296)
T PLN00184 50 SVPFLQKLIAEVLGTYFLVFTGCASVVVNMQND---NVVTLPGIAIVWGLTIMVLIYSLGHISGAHINPAVTIAFASCGR 126 (296)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHhhcccCC---CccccHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHhCC
Confidence 446889999999999999999998765422111 12356678899999999999999999999999999999999999
Q ss_pred CCccchhHHhhhhhHHHHHHHHHHHHHhccccccccCC---CcccccccCCccchhhHHHHHHHHHHHHHHHhccccccC
Q 024149 129 LSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAG---GANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSA 205 (272)
Q Consensus 129 ~~~~~~~~yi~aQ~lGa~~a~~~~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~f~~E~~~T~iL~~~il~~~~~~~~~ 205 (272)
++|.++++||++|++|+++|+++++.+++.+ .+.... ......|..+..++|+.|+++||+|+++++++.+++++.
T Consensus 127 ~~~~~~~~YiiaQllGA~lga~~~~~l~~~~-~~~~~~~~~~~~~t~p~~s~~~af~~E~i~TfvLv~~il~~~~~~~~~ 205 (296)
T PLN00184 127 FPLKQVPAYVISQVIGSTLAAATLRLLFGLD-HDVCSGKHDVFIGSSPVGSDLQAFVMEFIVTFYLMFIISGVATDNRAI 205 (296)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcch-hhccccccceeeccCcCCcHHHHHHHHHHHHHHHHHHHHheeccCcCC
Confidence 9999999999999999999999999998432 211111 111233445778999999999999999999886654422
Q ss_pred CCCCCCcchhHHHHHHHHHHHHHhcCCCcCccchhhhHHHHHHhCCCCCCCcceeEeeccccCCC
Q 024149 206 RDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHVRLIYSFHYPKI 270 (272)
Q Consensus 206 ~~~~~~~~~p~~ig~~v~~~~~~~~~~tG~~lNPAR~~gp~l~~~~~~~w~~~wvy~~g~~~~~~ 270 (272)
..+.|+.||+++.+.+++.+++||++||||||||||++++ .|+++||||+||.+|.+
T Consensus 206 -----~~~~~l~IG~~v~~~~~~~g~~TG~smNPAR~~GPal~~~---~~~~~WVy~vgPilGa~ 262 (296)
T PLN00184 206 -----GELAGLAIGSTVLLNVLIAAPVSSASMNPGRSLGPAMVYG---CYKGIWIYIVAPTLGAI 262 (296)
T ss_pred -----CcchHHHHHHHHHHHHHHhcccCccccCchhhHHHHHHhh---cccccchHHhHHHHHHH
Confidence 2368999999999999999999999999999999999974 78999999999998754
No 4
>KOG0224 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.1e-47 Score=331.02 Aligned_cols=216 Identities=28% Similarity=0.380 Sum_probs=184.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCccchhHHHHHHHHHHHHHHHHhcCCCCcccChHHHHHHHHhcC
Q 024149 49 SWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARK 128 (272)
Q Consensus 49 ~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~v~~~i~~~~~~SGah~NPavTl~~~~~g~ 128 (272)
+.++.|++++||+||++|++++++++++...++.. ...+..+.+++|+.+++.+++.+.+||||+|||||+++++.|+
T Consensus 28 ~~~l~Re~LAEFlGT~vL~~~G~g~v~Q~vls~g~--~g~~~~vnlgwg~av~~gVyvag~iSGgHlNPAVS~a~~~~g~ 105 (316)
T KOG0224|consen 28 RNELLREFLAEFLGTFVLVVFGLGSVAQAVLSGGT--GGSFIGVNLGWGFAVMMGVYVAGRISGGHLNPAVSLAMCILGR 105 (316)
T ss_pred HHHHHHHHHHHHHhHHHHHhhccceeEEEEeccCC--CCceEEEEehHhHHHHHHHHhhccccccccCHHHHHHHHHhcC
Confidence 45789999999999999999999999887766433 2345667889999999999999999999999999999999999
Q ss_pred CCccchhHHhhhhhHHHHHHHHHHHHHhccccccccCCCc--------------ccccccCCccchhhHHHHHHHHHHHH
Q 024149 129 LSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGA--------------NVVAHGYTKGDGLGAEIIGTFVLVYT 194 (272)
Q Consensus 129 ~~~~~~~~yi~aQ~lGa~~a~~~~~~l~~~~~~~~~~~~~--------------~~~~~~~~~~~~f~~E~~~T~iL~~~ 194 (272)
+||+|+++|+++|++||++|++.+|.+| .+.+....++. +.+.|..+..++|++|+++|.+|+.+
T Consensus 106 ~p~~k~p~Y~~aQ~iGAF~gaa~~y~~y-~d~i~~f~Gg~~~vtgp~aTAgiFaTyP~p~ls~~n~F~DqfigTa~L~~~ 184 (316)
T KOG0224|consen 106 LPWKKFPVYVLAQFIGAFLGAATVYGLY-YDAINEFDGGNRTVTGPKATAGIFATYPAPHLSLWNGFFDQFIGTAMLVLC 184 (316)
T ss_pred CChhhhhHHHHHHHHHHHHHHHHHHHHH-HHHHHhccCCceEecCCccceEEEeecCchHhhhhHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999 55554443332 22345678899999999999999999
Q ss_pred HHHhccccccCCCCCCCcchhHHHHHHHHHHHHHhcCCCcCccchhhhHHHHHHh-----CCCCCC---CcceeEeeccc
Q 024149 195 VFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIY-----NKDRGW---DDHVRLIYSFH 266 (272)
Q Consensus 195 il~~~~~~~~~~~~~~~~~~p~~ig~~v~~~~~~~~~~tG~~lNPAR~~gp~l~~-----~~~~~w---~~~wvy~~g~~ 266 (272)
+++++|++|..+ +.+.|+.+|+.+.++..+.+.+||+.+|||||||||++. +.+..+ .+.|+.|+||.
T Consensus 185 l~aI~D~rN~~p----~g~~p~~iG~lv~~Ig~s~G~N~GyaiNPARDlgPRlF~~~aGyG~~vF~~~~~~~WvPivgPl 260 (316)
T KOG0224|consen 185 LFAITDKRNPIP----TGLHPLVIGILVVAIGMSLGYNTGYAINPARDLGPRLFTSIAGYGPEVFSAGHNWWWVPIVGPL 260 (316)
T ss_pred eeEEecCCCCCC----cchhHHHHHHHHHHHHHHhhcccCcccCcccccchHHHHHHHhcchhhcccCCceeeeeehhhh
Confidence 999999988433 368999999999999999999999999999999999994 111122 57789999999
Q ss_pred cCCCC
Q 024149 267 YPKIR 271 (272)
Q Consensus 267 ~~~~~ 271 (272)
+|+|.
T Consensus 261 ~Gai~ 265 (316)
T KOG0224|consen 261 IGAIL 265 (316)
T ss_pred hhhhh
Confidence 99874
No 5
>PTZ00016 aquaglyceroporin; Provisional
Probab=100.00 E-value=1.8e-45 Score=329.99 Aligned_cols=214 Identities=26% Similarity=0.323 Sum_probs=176.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCccchhHHHHHHHHHHHHHHHHhcCCCCcccChHHHHHHHHhcC
Q 024149 49 SWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARK 128 (272)
Q Consensus 49 ~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~v~~~i~~~~~~SGah~NPavTl~~~~~g~ 128 (272)
.++++|++++||+||++++|+++++..+....+ ...+.+.+++++|+.+++.+++++++||+|+|||||+++++.++
T Consensus 46 ~~~~~~~~laEfigT~llvf~g~g~~~~~~~~~---~~~~~~~ial~~Glav~~~i~~~g~iSG~h~NPAVTla~~l~g~ 122 (294)
T PTZ00016 46 YRPNVREYVAEFLGTFVLLFFGEGVVATTHTVG---NNGDYLAITIGWGLGVTFGLLVSAGISGGHLNPAVTLGNAVFGK 122 (294)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhcccccC---CCCCcHHHHHHHHHHHHHHHHHhcccCcCccCHHHHHHHHHhcc
Confidence 357889999999999999999988765432211 12345678899999999999999999999999999999999999
Q ss_pred CCccchhHHhhhhhHHHHHHHHHHHHHhccccccccC-------------CCcccccccCCccchhhHHHHHHHHHHHHH
Q 024149 129 LSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLA-------------GGANVVAHGYTKGDGLGAEIIGTFVLVYTV 195 (272)
Q Consensus 129 ~~~~~~~~yi~aQ~lGa~~a~~~~~~l~~~~~~~~~~-------------~~~~~~~~~~~~~~~f~~E~~~T~iL~~~i 195 (272)
++|.+.+.|+++|++|+++|++++|.+++ +.++..+ .+...+.|+.+..++|+.|+++|++|++++
T Consensus 123 i~~~~~~~YiiaQ~lGa~~ga~ll~~~~~-~~~~~~~~~~~~~~~~~~~~~~~f~t~p~~s~~~a~~~E~i~T~iLv~~i 201 (294)
T PTZ00016 123 FPWKKLPGYFVAQLLGAFVGAACVYGLYY-GFFKDHGIPELPWETMANGFAGVFATYPREGNFYAIFSELILTAILLLVI 201 (294)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhH-HHHHhhcCcccccccccccccceeeCCCCccHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999983 3222211 112233456777899999999999999999
Q ss_pred HHhccccccCCCCCCCcchhHHHHHHHHHHHHHhcCCCcCccchhhhHHHHHHhC---CCCCCC----cceeEeeccccC
Q 024149 196 FSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYN---KDRGWD----DHVRLIYSFHYP 268 (272)
Q Consensus 196 l~~~~~~~~~~~~~~~~~~p~~ig~~v~~~~~~~~~~tG~~lNPAR~~gp~l~~~---~~~~w~----~~wvy~~g~~~~ 268 (272)
+++.|++++.. +...|+.||+++++++++.+++||++||||||||||+++. +...|+ |+||||+||.+|
T Consensus 202 la~~d~~~~~~----~~~~pl~IGl~v~~i~~~~g~~TG~smNPAR~fGPal~~~~~~g~~~~~~~~~~~WVy~vgP~vG 277 (294)
T PTZ00016 202 LAITDPNNCPA----FNYLPVAVGLLVFVIGISFGGNTGYALNPARDLGPRLFSAILWGSEVFTKDNYYFWVPLVAPFVG 277 (294)
T ss_pred HHhccCccCCC----cCcccHHHHHHHHHHHHhccCCCCCcccchhhHHHHHHHHHhccccccCcCCceeeeeehHHHHH
Confidence 99998876432 2367999999999999999999999999999999999972 222443 799999999988
Q ss_pred CC
Q 024149 269 KI 270 (272)
Q Consensus 269 ~~ 270 (272)
.+
T Consensus 278 a~ 279 (294)
T PTZ00016 278 AV 279 (294)
T ss_pred HH
Confidence 64
No 6
>PF00230 MIP: Major intrinsic protein; InterPro: IPR000425 A number of transmembrane (TM) channel proteins can be grouped together on the basis of sequence similarities [, , , , ]. These include: Mammalian major intrinsic protein (MIP). MIP is the major component of lens fibre gap junctions. Mammalian aquaporins []. These proteins form water- specific channels that provide the plasma membranes of red cells and kidney prox imal and collecting tubules with high permeability to water, thereby permitting water to move in the direction of an osmotic gradient. Soybean nodulin-26, a major component of the peribacteroid membrane induced during nodulation in legume roots after Rhizobium infection. Plants tonoplast intrinsic proteins (TIP). There are various isoforms of TIP : alpha (seed), gamma, Rt (root), and Wsi (water-stress induced). These proteins may allow the diffusion of water, amino acids and/or peptides from the tonoplas t interior to the cytoplasm. Bacterial glycerol facilitator protein (gene glpF), which facilitates the mo vement of glycerol across the cytoplasmic membrane. Salmonella typhimurium propanediol diffusion fac ilitator (gene pduF). Yeast FPS1, a glycerol uptake/efflux facilitator protein. Drosophila neurogenic protein 'big brain' (bib). This protein may mediate in tercellular communication; it may functions by allowing the transport of certain molecules(s) and thereby sending a signal for an exodermal cell to become an ep idermoblast instead of a neuroblast. Yeast hypothetical protein YFL054c. A hypothetical protein from the pepX region of Lactococcus lactis. The structures of various members of the MIP family have been determined by means of X-ray diffraction [, , ], revealing the fold to comprise a right-handed bundle of 6 transmembrane (TM) alpha-helices [, , ]. Similarities in the N-and C-terminal halves of the molecule suggest that the proteins may have arisen through tandem, intragenic duplication of an ancestral protein that contained 3 TM domains []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins []. Aquaporin-CHIP (Aquaporin 1) belongs to the Colton blood group system and is associated with Co(a/b) antigen.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3NE2_A 2C32_A 1YMG_A 2B6P_A 3C02_A 2B5F_D 3CN6_A 3CN5_A 1Z98_M 3CLL_A ....
Probab=100.00 E-value=2.4e-46 Score=325.83 Aligned_cols=218 Identities=36% Similarity=0.478 Sum_probs=183.6
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCC---CCccchhHHHHHHHHHHHHHHHHhcCCCCcccChHHHHH
Q 024149 46 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTK---CSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLG 122 (272)
Q Consensus 46 ~~~~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~---~~~~~~~~i~~~~g~~v~~~i~~~~~~SGah~NPavTl~ 122 (272)
|.++++++|++++||+||++++|+++++.........+ ....+...+++++|+.++..+++++++||+|+|||||++
T Consensus 1 ~~~~~~~~r~~~aEfigT~~lvf~~~~~~~~~~~~~~~~~~~~~~~~~~ial~~g~~~~~~i~~~~~iSGaH~NPaVTla 80 (227)
T PF00230_consen 1 ELKSPSLWRKFLAEFIGTFLLVFFGCGSVAALNGSTSSSGSDVSGGWLQIALAWGLALAALIYAFGPISGAHFNPAVTLA 80 (227)
T ss_dssp GCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSTTSTTSSHHHHHHHHHHHHHHHHHHHHHHHHHTSS-SHHHHHH
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccHHHHHHHHHHhhhhhhhhhhhccccccccchhhh
Confidence 35678899999999999999999998866543332211 122356778899999999999999999999999999999
Q ss_pred HHHhcCCCccchhHHhhhhhHHHHHHHHHHHHHhccccccccCCCcccccccCCccchhhHHHHHHHHHHHHHHHhcccc
Q 024149 123 LFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAK 202 (272)
Q Consensus 123 ~~~~g~~~~~~~~~yi~aQ~lGa~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~E~~~T~iL~~~il~~~~~~ 202 (272)
.++.|++++.+.+.|+++|++|+++|+.+++.+++ +.........+.+.++.+..++|+.|+++|++|+++++.+.|++
T Consensus 81 ~~l~g~~~~~~~~~Yi~aQ~lGa~~g~~l~~~~~~-~~~~~~~~~~~~~~~~~s~~~~~~~E~~~t~il~~~i~~~~~~~ 159 (227)
T PF00230_consen 81 FALTGRISWKKAIVYIIAQFLGAFLGALLVYALYP-DSNSAAGIFATTPPPGISLGQAFFSEFIGTFILVLVILAVADDK 159 (227)
T ss_dssp HHHTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHST-HHHTCTTTTSCGSTTTSSHHHHHHHHHHHHHHHHHHHHHHTSTT
T ss_pred eeeeeeecccceeeEEeeccccccccccchhhccc-CcccccccccccccccchhhhhhhhhhhhhhHHHhhhhhhcccc
Confidence 99999999999999999999999999999999983 32222333445567788889999999999999999999999988
Q ss_pred ccCCCCCCCcchhHHHHHHHHHHHHHhcCCCcCccchhhhHHHHHHhCCCCCCCcceeEeeccccCCC
Q 024149 203 RSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHVRLIYSFHYPKI 270 (272)
Q Consensus 203 ~~~~~~~~~~~~p~~ig~~v~~~~~~~~~~tG~~lNPAR~~gp~l~~~~~~~w~~~wvy~~g~~~~~~ 270 (272)
++... +.+.|+.||+++++..+..++.||++|||||||||+++.+ .|+++||||+||.+|.+
T Consensus 160 ~~~~~---~~~~p~~ig~~v~~~~~~~~~~tG~~~NPAr~~g~~l~~~---~~~~~wvy~~~P~~Ga~ 221 (227)
T PF00230_consen 160 RKFPL---GPLAPLAIGLTVGALVLAGGPYTGASLNPARALGPALFSG---IWDYFWVYWVGPFIGAI 221 (227)
T ss_dssp SSSTS---SGGHHHHHHHHHHHHHHHHHHHHST-SSHHHHHHHHHHHT---HHTTTTHHHHHHHHHHH
T ss_pred ccccc---ccccceeEEEEEeecccccccccccccCchhhcCceeecc---cCCeEEEEEehHHHHHH
Confidence 76542 2478999999999999999999999999999999999985 59999999999998754
No 7
>PRK05420 aquaporin Z; Provisional
Probab=100.00 E-value=3.9e-44 Score=311.84 Aligned_cols=209 Identities=28% Similarity=0.455 Sum_probs=169.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCccchhHHHHHHHHHHHHHHHHhcCCCCcccChHHHHHHHHhcCCCcc
Q 024149 53 YRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLT 132 (272)
Q Consensus 53 ~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~v~~~i~~~~~~SGah~NPavTl~~~~~g~~~~~ 132 (272)
+|++++||+||++|+|+++++.......+. ...+.+.+++++|+.++..+++++++||+|+|||||+++++.++++|.
T Consensus 2 ~~~~laEfigT~~lv~~g~~~~~~~~~~~~--~~~~~~~ial~~Gl~v~~~i~~~g~iSG~h~NPAvtl~~~~~~~i~~~ 79 (231)
T PRK05420 2 FKKLAAEFFGTFWLVFGGCGSAVLAAAFPE--LGIGFLGVALAFGLTVLTMAYAVGHISGGHFNPAVSVGLWAGGRFPAK 79 (231)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHhhcccCC--CCCchHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHhCCCCHH
Confidence 589999999999999999887543221111 123456789999999999999999999999999999999999999999
Q ss_pred chhHHhhhhhHHHHHHHHHHHHHhccc-cccccC-----CCcccccc-cCCccchhhHHHHHHHHHHHHHHHhccccccC
Q 024149 133 RALFYMVMQCLGAICGAGVVKGFMGAG-QYGRLA-----GGANVVAH-GYTKGDGLGAEIIGTFVLVYTVFSATDAKRSA 205 (272)
Q Consensus 133 ~~~~yi~aQ~lGa~~a~~~~~~l~~~~-~~~~~~-----~~~~~~~~-~~~~~~~f~~E~~~T~iL~~~il~~~~~~~~~ 205 (272)
+.+.|+++|++|+++|+.+++.+++.+ .++..+ .+.....| ..+..++++.|+++|++|+++++.+.|+++.
T Consensus 80 ~~~~Y~~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~T~iLv~~i~~~~~~~~~- 158 (231)
T PRK05420 80 ELVPYIIAQVVGGIAAAAVLYLIASGKAGFDLAGSGFASNGYGEHSPGGYSLLAALVCEVVLTAFFLLVILGATDKRAP- 158 (231)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHhCCccccccccccccccccccCCCCcccHHHHHHHHHHHHHHHHHHHHHHhCCCCC-
Confidence 999999999999999999999887332 111111 01111122 3466799999999999999999999886542
Q ss_pred CCCCCCcchhHHHHHHHHHHHHHhcCCCcCccchhhhHHHHHHhCCCCCCCcceeEeeccccCCC
Q 024149 206 RDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHVRLIYSFHYPKI 270 (272)
Q Consensus 206 ~~~~~~~~~p~~ig~~v~~~~~~~~~~tG~~lNPAR~~gp~l~~~~~~~w~~~wvy~~g~~~~~~ 270 (272)
+...|+.||+++.+.+++.+++||++||||||||||++++ +..|++|||||+||.+|.+
T Consensus 159 -----~~~~p~~iGl~v~~~~~~~~~~TG~s~NPAR~~gpal~~g-~~~~~~~wvy~vgP~~Ga~ 217 (231)
T PRK05420 159 -----AGFAPIAIGLALTLIHLISIPVTNTSVNPARSTGVALFVG-GWALEQLWLFWVAPIVGAI 217 (231)
T ss_pred -----CcchHHHHHHHHHHHHHHhhccCCCccCcHHHHHHHHHhC-CCCccceEEeehHHHHHHH
Confidence 2368999999999999999999999999999999999974 2345799999999998764
No 8
>PLN00166 aquaporin TIP2; Provisional
Probab=100.00 E-value=3.6e-44 Score=314.97 Aligned_cols=212 Identities=32% Similarity=0.465 Sum_probs=175.1
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhcc-cccCC-CCCccchhHHHHHHHHHHHHHHHHhcCCCCcccChHHHHHHHH
Q 024149 48 KSWSFYRAGIAEFIATFLFLYISVLTVMGV-VKSNT-KCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFL 125 (272)
Q Consensus 48 ~~~~~~~~~~aE~igT~~lv~~~~~~~~~~-~~~~~-~~~~~~~~~i~~~~g~~v~~~i~~~~~~SGah~NPavTl~~~~ 125 (272)
..++.+|++++||+|||+|+|+++++.... ...+. .....+.+.+++++|+.+++.+++++++||+|+|||||+++++
T Consensus 13 ~~~~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~~~ial~~Gl~v~~~i~~~g~iSGah~NPAvt~~~~l 92 (250)
T PLN00166 13 FSVASLKAYLSEFIATLLFVFAGVGSAIAFAKLTSDAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAI 92 (250)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCccHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHH
Confidence 346778999999999999999999876542 11111 1112245678899999999999999999999999999999999
Q ss_pred hcCCCccchhHHhhhhhHHHHHHHHHHHHHhccccccccCCCcccccccCCccchhhHHHHHHHHHHHHHHHhccccccC
Q 024149 126 ARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSA 205 (272)
Q Consensus 126 ~g~~~~~~~~~yi~aQ~lGa~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~E~~~T~iL~~~il~~~~~~~~~ 205 (272)
.++++|.+.++|+++|++|+++|+.+++.+++.+... .....++.+..++++.|+++||+|+++++...+++|+.
T Consensus 93 ~g~~~~~~~~~y~~aq~lGa~~~a~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~E~v~Tf~Lv~~i~~~~~~~~~~ 167 (250)
T PLN00166 93 GGNITIITGFFYWIAQCLGSIVACLLLVFVTNGESVP-----THGVAAGLGAIEGVVMEIVVTFALVYTVYATAADPKKG 167 (250)
T ss_pred hCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCc-----ccccCCCCcHHHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 9999999999999999999999999999887332111 12234566778999999999999999999876655432
Q ss_pred CCCCCCcchhHHHHHHHHHHHHHhcCCCcCccchhhhHHHHHHhCCCCCCCcceeEeeccccCCC
Q 024149 206 RDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHVRLIYSFHYPKI 270 (272)
Q Consensus 206 ~~~~~~~~~p~~ig~~v~~~~~~~~~~tG~~lNPAR~~gp~l~~~~~~~w~~~wvy~~g~~~~~~ 270 (272)
. .+.+.|+.||+++.+.+++++++||++||||||||||++++ +|+++||||+||.+|.+
T Consensus 168 ~---~~~~~p~~iGl~v~~~~~~~~~~tG~~~NPAR~~gPal~~~---~~~~~wvywvgPi~Ga~ 226 (250)
T PLN00166 168 S---LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSG---DFSQIWIYWVGPLVGGA 226 (250)
T ss_pred c---cccchhHHHHHHHHHHHHcccCCCCCccCchHhhHHHHhcC---CCcccchhhHHHHHHHH
Confidence 1 12478999999999999999999999999999999999974 69999999999998764
No 9
>PLN00167 aquaporin TIP5; Provisional
Probab=100.00 E-value=1.6e-43 Score=311.66 Aligned_cols=211 Identities=28% Similarity=0.380 Sum_probs=175.1
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhcccc--cCCCCCccchhHHHHHHHHHHHHHHHHhcCCCCcccChHHHHHHHH
Q 024149 48 KSWSFYRAGIAEFIATFLFLYISVLTVMGVVK--SNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFL 125 (272)
Q Consensus 48 ~~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~g~~v~~~i~~~~~~SGah~NPavTl~~~~ 125 (272)
..++.+|++++||+|||+|+|+++++...... .+.+....+++.+++++|+.+++.+++++++||+|+|||||++.++
T Consensus 17 ~~~~~~~~~laEflgTf~lv~~~~g~~~~~~~~~~~~~~~~~~~~~i~l~~Gl~v~~~i~~~g~iSGah~NPAvtl~~~~ 96 (256)
T PLN00167 17 VTRNALRSYLAEFISTFFFVFAAVGSAMSSRKLMPDAASDPSSLLIVAIANAFALSSAVYIAANISGGHVNPAVTFGMAV 96 (256)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccCCCCcchHHHHHHHHHHHHHHHHhhcccccccCHHHHHHHHH
Confidence 35678999999999999999999988764321 1111122356778999999999999999999999999999999999
Q ss_pred hcCCCccchhHHhhhhhHHHHHHHHHHHHHhccccccccCCCcccccccCCccchhhHHHHHHHHHHHHHHHhccccccC
Q 024149 126 ARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSA 205 (272)
Q Consensus 126 ~g~~~~~~~~~yi~aQ~lGa~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~E~~~T~iL~~~il~~~~~~~~~ 205 (272)
.++++|.+.++|+++|++|+++|+.+++.+++..... .....++.+..++++.|+++|++|+++++.+.|+++..
T Consensus 97 ~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~-----~~~~~~~~s~~~~~~~E~i~T~~L~~~i~~~~~~~~~~ 171 (256)
T PLN00167 97 GGHISVPTAMFYWISQMLASVMACLFLKVTTVGQHVP-----TYKIAEEMTGFGASVLEGVLTFGLVYTVYAAGDPRRGL 171 (256)
T ss_pred hCCCcHhhhhHHHHHHHHHHHHHHHHHHHhhcccccc-----ccccCcccchHHHHHHHHHHHHHHHHHHHHhccccccC
Confidence 9999999999999999999999999999887322111 11222345567889999999999999999988876532
Q ss_pred CCCCCCcchhHHHHHHHHHHHHHhcCCCcCccchhhhHHHHHHhCCCCCCCcceeEeeccccCCC
Q 024149 206 RDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHVRLIYSFHYPKI 270 (272)
Q Consensus 206 ~~~~~~~~~p~~ig~~v~~~~~~~~~~tG~~lNPAR~~gp~l~~~~~~~w~~~wvy~~g~~~~~~ 270 (272)
. +...|+.||+++.+.+++.+++||++||||||||||++++ .|+++|+||+||.+|.+
T Consensus 172 ~----~~~~pl~iGl~v~~~~~~~g~~TG~a~NPAR~~gPal~~~---~~~~~wvywvgP~~Ga~ 229 (256)
T PLN00167 172 L----GAIGPLAIGLVAGANVLAAGPFSGGSMNPACAFGSAVVAG---SFKNQAVYWVGPLLGGA 229 (256)
T ss_pred C----CCcchHHHHHHHHHHHHhccCCCCcccCcccchHHHHhcc---CccCcEEEeHHHHHHHH
Confidence 1 3468999999999999999999999999999999999864 69999999999998764
No 10
>PLN00026 aquaporin NIP; Provisional
Probab=100.00 E-value=1.2e-43 Score=316.87 Aligned_cols=205 Identities=25% Similarity=0.386 Sum_probs=170.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCccchhHHHHHHHHHHHHHHHHhcCCCCcccChHHHHHHHHhcC
Q 024149 49 SWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARK 128 (272)
Q Consensus 49 ~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~v~~~i~~~~~~SGah~NPavTl~~~~~g~ 128 (272)
..+++|++++||+|||+|+|++++......... ...+++.+++++|+.+++.+++++++||+|+|||||+++++.++
T Consensus 67 ~~~~~r~~laEfiGTflLvf~g~~~~~~~~~~~---~~~~~~~ial~~GlaV~~~i~~~g~ISGaHlNPAVTla~al~g~ 143 (298)
T PLN00026 67 DVSLTRKLGAEFVGTFILIFAATAGPIVNQKYD---GAETLIGNAACAGLAVMIVILSTGHISGAHLNPSLTIAFAALRH 143 (298)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHhccccC---CccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHHHHhCC
Confidence 346789999999999999999986544211111 11245667899999999999999999999999999999999999
Q ss_pred CCccchhHHhhhhhHHHHHHHHHHHHHhccccccccCCCcccccccCCccchhhHHHHHHHHHHHHHHHhccccccCCCC
Q 024149 129 LSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDS 208 (272)
Q Consensus 129 ~~~~~~~~yi~aQ~lGa~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~E~~~T~iL~~~il~~~~~~~~~~~~ 208 (272)
++|.+.++||++|++|+++|+++++.++++ .. ..+. ..|+.+..++|+.|+++||+|+++++++.+++++.
T Consensus 144 ~~~~~~~~YiiaQilGAi~aa~~~~~~~~~-~~---~~g~--t~p~~s~~~a~~~Efi~TfiLv~vi~~v~~~~~~~--- 214 (298)
T PLN00026 144 FPWKHVPAYIAAQVSASICASFALKGVFHP-FM---SGGV--TVPSVSTGQAFALEFIITFNLLFVVTAVATDTRAV--- 214 (298)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cc---cCce--eeecccHHHHHHHHHHHHHHHHHhheeeecCCCCc---
Confidence 999999999999999999999999999843 21 1122 23567888999999999999999999765444322
Q ss_pred CCCcchhHHHHHHHHHHHHHhcCCCcCccchhhhHHHHHHhCCCCCCCcceeEeeccccCCC
Q 024149 209 HVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHVRLIYSFHYPKI 270 (272)
Q Consensus 209 ~~~~~~p~~ig~~v~~~~~~~~~~tG~~lNPAR~~gp~l~~~~~~~w~~~wvy~~g~~~~~~ 270 (272)
....|+.+|+++.+.+++.+++||++|||||||||+++.+ +|+++||||+||.+|.+
T Consensus 215 --~~~~~l~iGl~V~~~~l~~g~~TGa~mNPARtlgPal~~~---~~~~~wVy~vaPilGAi 271 (298)
T PLN00026 215 --GELAGIAVGATVMLNILVAGPSTGGSMNPVRTLGPAVAAG---NYRAIWIYLVAPTLGAL 271 (298)
T ss_pred --CCccchHHHHHHHHHHHHhcccCccccChHHHHHHHHhcC---CchheeHHHHHHHHHHH
Confidence 2357899999999999999999999999999999999863 79999999999998764
No 11
>PLN00027 aquaporin TIP; Provisional
Probab=100.00 E-value=1.4e-43 Score=312.16 Aligned_cols=211 Identities=31% Similarity=0.441 Sum_probs=173.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhcccc-c-CCCCCccchhHHHHHHHHHHHHHHHHhcCCCCcccChHHHHHHHHh
Q 024149 49 SWSFYRAGIAEFIATFLFLYISVLTVMGVVK-S-NTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLA 126 (272)
Q Consensus 49 ~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~-~-~~~~~~~~~~~i~~~~g~~v~~~i~~~~~~SGah~NPavTl~~~~~ 126 (272)
.++.+|++++||++|++|+|+++++...... . +......+.+.+++++|+.+++.+++++++||+|+|||+|+++++.
T Consensus 16 ~~~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~l~~~l~~Gl~v~~~i~~~~~iSGah~NPAvtl~~~~~ 95 (252)
T PLN00027 16 HPDALKAALAEFISTLIFVFAGEGSGMAFNKLTDNGSTTPAGLVAAALAHAFALFVAVSVGANISGGHVNPAVTFGAFIG 95 (252)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCcchHHHHHHHHHHHHHHHHHHcccCccccChHHHHHHHHh
Confidence 3567899999999999999999987653211 1 1111123456789999999999999999999999999999999999
Q ss_pred cCCCccchhHHhhhhhHHHHHHHHHHHHHhccccccccCCCcccccccCCccchhhHHHHHHHHHHHHHHHhccccccCC
Q 024149 127 RKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSAR 206 (272)
Q Consensus 127 g~~~~~~~~~yi~aQ~lGa~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~E~~~T~iL~~~il~~~~~~~~~~ 206 (272)
++++|.+.++|+++|++|+++|+.+++.+.+... .+...+.++.+..++++.|+++||+|+++++.+..++++..
T Consensus 96 g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~E~i~Tf~Lv~~i~~~~~~~~~~~ 170 (252)
T PLN00027 96 GNITLLRGILYWIAQLLGSVVACLLLKFSTGGLE-----TSAFSLSSGVGVWNAFVFEIVMTFGLVYTVYATAVDPKKGD 170 (252)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc-----cccccCCCCccHHHHHHHHHHHHHHHHHHHHHhccccccCC
Confidence 9999999999999999999999999987763211 12234456778889999999999999999998753333221
Q ss_pred CCCCCcchhHHHHHHHHHHHHHhcCCCcCccchhhhHHHHHHhCCCCCCCcceeEeeccccCCC
Q 024149 207 DSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHVRLIYSFHYPKI 270 (272)
Q Consensus 207 ~~~~~~~~p~~ig~~v~~~~~~~~~~tG~~lNPAR~~gp~l~~~~~~~w~~~wvy~~g~~~~~~ 270 (272)
.+.+.|+.||+++...+++++++||++||||||||||++.+ +|++|||||+||.+|.+
T Consensus 171 ---~~~~~p~~iGl~v~~~~~~~g~~TG~~~NPAR~~gPal~~~---~~~~~wvy~vgP~~Ga~ 228 (252)
T PLN00027 171 ---LGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW---TWTNHWVYWAGPLIGGG 228 (252)
T ss_pred ---ccchHHHHHHHHHHHHHHhcccccccccCcchhHHHHHHhh---cchhhhHHHHHHHHHHH
Confidence 12478999999999999999999999999999999999974 69999999999998864
No 12
>PLN00182 putative aquaporin NIP4; Provisional
Probab=100.00 E-value=8.6e-43 Score=310.15 Aligned_cols=206 Identities=26% Similarity=0.396 Sum_probs=172.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCccchhHHHHHHHHHHHHHHHHhcCCCCcccChHHHHHHHHhcC
Q 024149 49 SWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARK 128 (272)
Q Consensus 49 ~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~v~~~i~~~~~~SGah~NPavTl~~~~~g~ 128 (272)
..+++|++++||+|||+|+|++++++......+ ...+.+.+++++|+.+++.+++++++||+|+|||||+++++.++
T Consensus 38 ~~~~~~~~~aEflgTflLvf~g~g~~~~~~~~~---~~~~~~~iala~Gl~v~~~i~~~g~iSGah~NPAVTla~~~~~~ 114 (283)
T PLN00182 38 IVCLTQKLIAEMIGTYFIIFSGCGVVVVNVLYG---GTITFPGICVTWGLIVMVMIYSTGHISGAHFNPAVTVTFAIFRR 114 (283)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccC---CCcchHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHHcC
Confidence 346889999999999999999998765432211 12345677889999999999999999999999999999999999
Q ss_pred CCccchhHHhhhhhHHHHHHHHHHHHHhccccccccCCCcccccccCCccchhhHHHHHHHHHHHHHHHhccccccCCCC
Q 024149 129 LSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDS 208 (272)
Q Consensus 129 ~~~~~~~~yi~aQ~lGa~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~E~~~T~iL~~~il~~~~~~~~~~~~ 208 (272)
++|.++++||++|++|+++|+++++.+++.. ..+.....|+.+..++++.|+++|++|+++++.+.++++..
T Consensus 115 ~~~~~~~~Yi~aQ~lGa~~ga~~~~~~~~~~-----~~~~~~~~p~~s~~~a~~~E~l~TfiLv~~i~~~~~~~~~~--- 186 (283)
T PLN00182 115 FPWYQVPLYIGAQLTGSLLASLTLRLMFNVT-----PEAFFGTTPTDSSGQALVAEIIISFLLMFVISGVATDSRAV--- 186 (283)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhccc-----ccceeeCCCCcchHHHHHHHHHHHHHHHHHHHhheeccccC---
Confidence 9999999999999999999999999998321 11222334556778999999999999999999875544321
Q ss_pred CCCcchhHHHHHHHHHHHHHhcCCCcCccchhhhHHHHHHhCCCCCCCcceeEeeccccCCC
Q 024149 209 HVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHVRLIYSFHYPKI 270 (272)
Q Consensus 209 ~~~~~~p~~ig~~v~~~~~~~~~~tG~~lNPAR~~gp~l~~~~~~~w~~~wvy~~g~~~~~~ 270 (272)
+.+.|+.+|+++.+.+++.+++||+++||||+|||+++.+ .|+++|+||+||.+|.+
T Consensus 187 --~~~~~l~iGl~V~~~~~~~g~~SGa~lNPARt~gpal~~~---~~~~~wvY~vap~lGA~ 243 (283)
T PLN00182 187 --GELAGIAVGMTIILNVFVAGPISGASMNPARSLGPAIVMG---RYKGIWVYIVGPFVGII 243 (283)
T ss_pred --CcchhHHHHHHHHHHHHHccccCccccChHHHHHHHHHhc---cccceeHHHHHHHHHHH
Confidence 2357999999999999999999999999999999999863 69999999999998764
No 13
>PLN00183 putative aquaporin NIP7; Provisional
Probab=100.00 E-value=4.2e-41 Score=298.29 Aligned_cols=205 Identities=25% Similarity=0.356 Sum_probs=171.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCccchhHHHHHHHHHHHHHHHHhcCCCCcccChHHHHHHHHhcC
Q 024149 49 SWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARK 128 (272)
Q Consensus 49 ~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~v~~~i~~~~~~SGah~NPavTl~~~~~g~ 128 (272)
..+.+|++++||++||+++|++++......... ...+.+.+++.+|+.+++.+++++++||+|+|||||+++++.++
T Consensus 41 ~~~~~~~~laEfigTfllvf~~~g~~~~~~~~~---~~~~~~~~al~~Gl~V~~~i~~~g~vSGah~NPAvTla~~l~g~ 117 (274)
T PLN00183 41 DLNPARMVLAEMVGTFILMFCVCGIIASTQLSG---GEVGLLEYAATAGLTVVVVVFSIGSISGAHVNPSVTIAFATFGH 117 (274)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHhhccccC---CccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHHHHhcC
Confidence 346789999999999999999987765422211 12355667899999999999999999999999999999999999
Q ss_pred CCccchhHHhhhhhHHHHHHHHHHHHHhccccccccCCCcccccccCCccchhhHHHHHHHHHHHHHHHhccccccCCCC
Q 024149 129 LSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDS 208 (272)
Q Consensus 129 ~~~~~~~~yi~aQ~lGa~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~E~~~T~iL~~~il~~~~~~~~~~~~ 208 (272)
++|.+.++||++|++|+++|+.+++.+++... ......|..+..++++.|+++|++|+++++.+.+++++.
T Consensus 118 i~~~~~~~Yi~aQ~lGa~~ga~l~~~~~~~~~------~~~~~~p~~~~~~~~~~E~v~T~iLv~~i~~~~~~~~~~--- 188 (274)
T PLN00183 118 FPWSKVPLYITAQTVGSVLATYVGVSVYGVKA------DLMTTKPAQGCSSAFWVEFIATFIVMFLAASLTSQPQSL--- 188 (274)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc------ccccCCCcccHHHHHHHHHHHHHHHHHhhheeeccccCC---
Confidence 99999999999999999999999999884311 122233445567899999999999999999887765422
Q ss_pred CCCcchhHHHHHHHHHHHHHhcCCCcCccchhhhHHHHHHhCCCCCCCcceeEeeccccCCC
Q 024149 209 HVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHVRLIYSFHYPKI 270 (272)
Q Consensus 209 ~~~~~~p~~ig~~v~~~~~~~~~~tG~~lNPAR~~gp~l~~~~~~~w~~~wvy~~g~~~~~~ 270 (272)
+...|+.+|+.+.+.+++.+++||++|||||+|+|+++. ..|+++|+||+||.+|.+
T Consensus 189 --~~~~~l~iGl~v~~~v~~~g~~TG~~~NPArtlgpai~~---~~~~~~wvy~vapilGai 245 (274)
T PLN00183 189 --GHLSGFVIGIAIGLAVLITGPVSGGSMNPARSLGPAIVS---WDFKDIWIYITAPTIGAV 245 (274)
T ss_pred --CCceehHHHHHHHHHHHhccCCCCCEeCHHHHHHHHHhC---CChhheehHHHHHHHHHH
Confidence 235799999999999999999999999999999999986 379999999999998764
No 14
>cd00333 MIP Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms.
Probab=100.00 E-value=1.7e-40 Score=289.31 Aligned_cols=211 Identities=40% Similarity=0.608 Sum_probs=173.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccccCCCCCccchhHHHHHHHHHHHHHHHHhcCCCCcccChHHHHHHHHhcCCCccc
Q 024149 54 RAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTR 133 (272)
Q Consensus 54 ~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~v~~~i~~~~~~SGah~NPavTl~~~~~g~~~~~~ 133 (272)
|++++||+||++++++++++..+....++ ...+.+.+++++|+.+...+++++++||+|+|||+|+++++.++++|.+
T Consensus 1 r~~~~E~~gT~~lv~~~~~~~~~~~~~~~--~~~~~~~~~~~~gl~v~~~~~~~~~~sga~~NPa~t~~~~~~~~~~~~~ 78 (228)
T cd00333 1 RKYLAEFLGTFLLVFFGCGSVLAVKLAGG--ASGGLLGIALAWGFAIFVLVYAVGHISGGHINPAVTLALAVGGRFPLIR 78 (228)
T ss_pred ChhhHHHHHHHHHHHHHhHHHhhccccCC--CCCcHHHHHHHHHHHHHHHHHHhccCCCCeEcHHHHHHHHHhCCCCHHH
Confidence 56889999999999999988765433221 1234567789999999999999999999999999999999999999999
Q ss_pred hhHHhhhhhHHHHHHHHHHHHHhccccccccCCCc--------ccccccCCccchhhHHHHHHHHHHHHHHHhccccccC
Q 024149 134 ALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGA--------NVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSA 205 (272)
Q Consensus 134 ~~~yi~aQ~lGa~~a~~~~~~l~~~~~~~~~~~~~--------~~~~~~~~~~~~f~~E~~~T~iL~~~il~~~~~~~~~ 205 (272)
.++|+++|++|+++|+.+++.+++ +.++...... +.+.++.+..++++.|+++|++|+++++.+.+++++.
T Consensus 79 ~~~y~~aq~~Ga~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~T~~Lv~~i~~~~~~~~~~ 157 (228)
T cd00333 79 VIPYIIAQLLGAILGAALLYGLYY-GLYLEFLGANNIVAGIFGTYPSPGVSNGNAFFVEFIGTFILVLVVFATTDDPNGP 157 (228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhH-HHHhhcCCccccccceeccCCCCCccHHHHHHHHHHHHHHHHHHHHHHccccccC
Confidence 999999999999999999999983 3333222111 2234456778999999999999999999988765531
Q ss_pred CCCCCCcchhHHHHHHHHHHHHHhcCCCcCccchhhhHHHHHHhCCCCCCCcceeEeeccccCCC
Q 024149 206 RDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHVRLIYSFHYPKI 270 (272)
Q Consensus 206 ~~~~~~~~~p~~ig~~v~~~~~~~~~~tG~~lNPAR~~gp~l~~~~~~~w~~~wvy~~g~~~~~~ 270 (272)
.. ....|+.+|+++.+...+++++||+++||||||+|+++.+....|+++|+||+||++|.+
T Consensus 158 ~~---~~~~~~~iGl~v~~~~~~~g~~sG~~~NPAr~~g~~i~~~~~~~~~~~~vy~vap~lGai 219 (228)
T cd00333 158 PP---GGLAPLAIGLLVAAIGLAGGPITGASMNPARSLGPALFTGLARHWHYFWVYWVGPLIGAI 219 (228)
T ss_pred CC---CCcHHHHHHHHHHHHHHHhhcccccccCHhhchHHHHHhccccccceeehhhhHHHHHHH
Confidence 11 246899999999999999999999999999999999997522369999999999999865
No 15
>TIGR00861 MIP MIP family channel proteins. processes. Some members of the family, including the yeast FPS protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport both water and small solutes.
Probab=100.00 E-value=9.5e-40 Score=282.36 Aligned_cols=208 Identities=39% Similarity=0.640 Sum_probs=169.0
Q ss_pred HHHHHHHHHHHHHHHHHhcccccC--CCCCccchhHHHHHHHHHHHHHHHHhcCCCCcccChHHHHHHHHhcCCCccchh
Q 024149 58 AEFIATFLFLYISVLTVMGVVKSN--TKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRAL 135 (272)
Q Consensus 58 aE~igT~~lv~~~~~~~~~~~~~~--~~~~~~~~~~i~~~~g~~v~~~i~~~~~~SGah~NPavTl~~~~~g~~~~~~~~ 135 (272)
+||+||++++|+++++.......+ ......+...+++.+|+.++..+++++++||+|+|||+|+++++.++++|.+.+
T Consensus 1 aEf~gT~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~Gl~v~~~~~~~~~~sg~h~NPavt~~~~l~~~~~~~~~~ 80 (216)
T TIGR00861 1 AEFLGTFLLVFFGVGSALGVNVAGAYGAVGGGQFLGVALAFGLAVATLVYCVGGISGAHLNPAVTIALLLGRRFPLKRVP 80 (216)
T ss_pred CcHHHHHHHHHHHHHHHHhhhcccccCCCCCcchHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHHhCCCCHHHHH
Confidence 599999999999998776533221 111112456789999999999999999999999999999999999999999999
Q ss_pred HHhhhhhHHHHHHHHHHHHHhccccccccCCCcccccccCCccchhhHHHHHHHHHHHHHHHhccccccCCCCCCCcchh
Q 024149 136 FYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAP 215 (272)
Q Consensus 136 ~yi~aQ~lGa~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~E~~~T~iL~~~il~~~~~~~~~~~~~~~~~~p 215 (272)
+|+++|++|+++|+.+++.+++ +.++..........++.+..++++.|+++|++|+++++...+++++... ....|
T Consensus 81 ~y~~aQ~~Ga~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~~~---~~~~~ 156 (216)
T TIGR00861 81 VYIVAQLIGAILGAALLYGLTS-GLFPGNLAVNGSGAAGVSSGQAFFVEFIGTAILVLVIFATTDPRNRVPR---GGFAP 156 (216)
T ss_pred HHHHHHHHHHHHHHHHHHHHcc-ccccCCccccCCCCCcccHHHHHHHHHHHHHHHHHHHheeecCCCCCCC---CccHH
Confidence 9999999999999999999883 3322111111122345677899999999999999999988876544221 22689
Q ss_pred HHHHHHHHHHHHHhcCCCcCccchhhhHHHHHHhCCCCCCCcceeEeeccccCCC
Q 024149 216 LPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHVRLIYSFHYPKI 270 (272)
Q Consensus 216 ~~ig~~v~~~~~~~~~~tG~~lNPAR~~gp~l~~~~~~~w~~~wvy~~g~~~~~~ 270 (272)
+.+|+++.+.+.+.+++||+++||||+|+|+++.+ ...|+++|+||+||+++.+
T Consensus 157 ~~iG~~v~~~~~~~g~~sG~~~NPAr~l~~~l~~~-~~~~~~~~vy~vap~~Ga~ 210 (216)
T TIGR00861 157 LAIGLLVFLIHLSMGPYTGTGMNPARSLGPALFAG-LAGWGNHWVYWVGPIIGAI 210 (216)
T ss_pred HHHHHHHHHHHHhCCCCcccccCchhhhhHHHHhc-cccccceeHHHHHHHHHHH
Confidence 99999999999999999999999999999999873 2479999999999998764
No 16
>PLN00182 putative aquaporin NIP4; Provisional
Probab=99.81 E-value=1.9e-19 Score=160.64 Aligned_cols=132 Identities=22% Similarity=0.260 Sum_probs=101.9
Q ss_pred CchhhhhhhhhhhhhccccccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCccchhHHH
Q 024149 14 KFAERQPIGTAAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIA 93 (272)
Q Consensus 14 ~Y~~aQ~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~i~ 93 (272)
.|+.+|++|+++++.+.+...+.......... ...+.++.+++|+++|++|++++++.... .+ . .. . ..+
T Consensus 122 ~Yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~--p~~s~~~a~~~E~l~TfiLv~~i~~~~~~-~~--~-~~--~--~~~ 191 (283)
T PLN00182 122 LYIGAQLTGSLLASLTLRLMFNVTPEAFFGTT--PTDSSGQALVAEIIISFLLMFVISGVATD-SR--A-VG--E--LAG 191 (283)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccccceeeCC--CCcchHHHHHHHHHHHHHHHHHHHhheec-cc--c-CC--c--chh
Confidence 59999999999998876554432211111111 12356899999999999999988764332 11 1 11 1 247
Q ss_pred HHHHHHHHHHHHHhcCCCCcccChHHHHHHHHhcCCCccchhHHhhhhhHHHHHHHHHHHHHh
Q 024149 94 WAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFM 156 (272)
Q Consensus 94 ~~~g~~v~~~i~~~~~~SGah~NPavTl~~~~~g~~~~~~~~~yi~aQ~lGa~~a~~~~~~l~ 156 (272)
+++|+.+++.+++.+++||+|+|||||+++++.++ .|.+.|+||++|++|+++|+++++.+.
T Consensus 192 l~iGl~V~~~~~~~g~~SGa~lNPARt~gpal~~~-~~~~~wvY~vap~lGA~lgally~~l~ 253 (283)
T PLN00182 192 IAVGMTIILNVFVAGPISGASMNPARSLGPAIVMG-RYKGIWVYIVGPFVGIIAGGFVYNLIR 253 (283)
T ss_pred HHHHHHHHHHHHHccccCccccChHHHHHHHHHhc-cccceeHHHHHHHHHHHHHHHHHHHHh
Confidence 89999999999999999999999999999999865 588999999999999999999999887
No 17
>cd00333 MIP Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms.
Probab=99.78 E-value=5.7e-19 Score=153.89 Aligned_cols=135 Identities=22% Similarity=0.137 Sum_probs=101.8
Q ss_pred CchhhhhhhhhhhhhccccccCCCCCCC----------CCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCC
Q 024149 14 KFAERQPIGTAAQTQDGKDYVEPPPAPL----------FEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTK 83 (272)
Q Consensus 14 ~Y~~aQ~~Ga~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~ 83 (272)
-|+.+|++|+++++...+....+..... .........+.+|.+++|+++|+++++.++......+. .
T Consensus 81 ~y~~aq~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~T~~Lv~~i~~~~~~~~~--~- 157 (228)
T cd00333 81 PYIIAQLLGAILGAALLYGLYYGLYLEFLGANNIVAGIFGTYPSPGVSNGNAFFVEFIGTFILVLVVFATTDDPNG--P- 157 (228)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHhhcCCccccccceeccCCCCCccHHHHHHHHHHHHHHHHHHHHHHcccccc--C-
Confidence 4999999999999876544332211100 00111223467899999999999999988765432111 0
Q ss_pred CCccchhHHHHHHHHHHHHHHHHhcCCCCcccChHHHHHHHHhcCC--CccchhHHhhhhhHHHHHHHHHHHH
Q 024149 84 CSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKL--SLTRALFYMVMQCLGAICGAGVVKG 154 (272)
Q Consensus 84 ~~~~~~~~i~~~~g~~v~~~i~~~~~~SGah~NPavTl~~~~~g~~--~~~~~~~yi~aQ~lGa~~a~~~~~~ 154 (272)
......++.+|+.+...+++.+++||+|+|||+++++++.++. +|.+.|+||++|++|+++|+++++.
T Consensus 158 ---~~~~~~~~~iGl~v~~~~~~~g~~sG~~~NPAr~~g~~i~~~~~~~~~~~~vy~vap~lGai~aa~l~~~ 227 (228)
T cd00333 158 ---PPGGLAPLAIGLLVAAIGLAGGPITGASMNPARSLGPALFTGLARHWHYFWVYWVGPLIGAIAGALVYDY 227 (228)
T ss_pred ---CCCCcHHHHHHHHHHHHHHHhhcccccccCHhhchHHHHHhccccccceeehhhhHHHHHHHHHHHHHHh
Confidence 0112357899999999999999999999999999999999987 7999999999999999999988764
No 18
>PLN00026 aquaporin NIP; Provisional
Probab=99.78 E-value=7.8e-19 Score=157.34 Aligned_cols=131 Identities=23% Similarity=0.275 Sum_probs=101.6
Q ss_pred CchhhhhhhhhhhhhccccccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCccchhHHH
Q 024149 14 KFAERQPIGTAAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIA 93 (272)
Q Consensus 14 ~Y~~aQ~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~i~ 93 (272)
.|+.+|++|+++++...+.+..+...... .....+.++.++.|+++|++|+++++++.. ..+ .. . . ..+
T Consensus 151 ~YiiaQilGAi~aa~~~~~~~~~~~~~g~---t~p~~s~~~a~~~Efi~TfiLv~vi~~v~~-~~~--~~-~--~--~~~ 219 (298)
T PLN00026 151 AYIAAQVSASICASFALKGVFHPFMSGGV---TVPSVSTGQAFALEFIITFNLLFVVTAVAT-DTR--AV-G--E--LAG 219 (298)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccccCce---eeecccHHHHHHHHHHHHHHHHHhheeeec-CCC--Cc-C--C--ccc
Confidence 59999999999999876655432111100 111336789999999999999998764321 111 11 1 1 136
Q ss_pred HHHHHHHHHHHHHhcCCCCcccChHHHHHHHHhcCCCccchhHHhhhhhHHHHHHHHHHHHHh
Q 024149 94 WAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFM 156 (272)
Q Consensus 94 ~~~g~~v~~~i~~~~~~SGah~NPavTl~~~~~g~~~~~~~~~yi~aQ~lGa~~a~~~~~~l~ 156 (272)
+++|+.+++.+++.++.||+|+|||+|+++++.++ +|.+.|+||++|++|+++|+++++.+.
T Consensus 220 l~iGl~V~~~~l~~g~~TGa~mNPARtlgPal~~~-~~~~~wVy~vaPilGAilga~ly~~~~ 281 (298)
T PLN00026 220 IAVGATVMLNILVAGPSTGGSMNPVRTLGPAVAAG-NYRAIWIYLVAPTLGALAGAGTYTAVK 281 (298)
T ss_pred hHHHHHHHHHHHHhcccCccccChHHHHHHHHhcC-CchheeHHHHHHHHHHHHHHHHHHHHh
Confidence 88999999999999999999999999999999876 899999999999999999999988875
No 19
>PLN00183 putative aquaporin NIP7; Provisional
Probab=99.77 E-value=1.5e-18 Score=154.34 Aligned_cols=134 Identities=22% Similarity=0.284 Sum_probs=102.4
Q ss_pred CchhhhhhhhhhhhhccccccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCccchhHHH
Q 024149 14 KFAERQPIGTAAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIA 93 (272)
Q Consensus 14 ~Y~~aQ~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~i~ 93 (272)
.|+.+|++|+++++...+........ ...+.. ..+.++.+++|+++|+++++.+++..... .+ . +. ..+
T Consensus 125 ~Yi~aQ~lGa~~ga~l~~~~~~~~~~-~~~~~p--~~~~~~~~~~E~v~T~iLv~~i~~~~~~~--~~--~---~~-~~~ 193 (274)
T PLN00183 125 LYITAQTVGSVLATYVGVSVYGVKAD-LMTTKP--AQGCSSAFWVEFIATFIVMFLAASLTSQP--QS--L---GH-LSG 193 (274)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcc-cccCCC--cccHHHHHHHHHHHHHHHHHhhheeeccc--cC--C---CC-cee
Confidence 59999999999998875444432221 111111 12457899999999999999886554321 11 1 11 126
Q ss_pred HHHHHHHHHHHHHhcCCCCcccChHHHHHHHHhcCCCccchhHHhhhhhHHHHHHHHHHHHHhccc
Q 024149 94 WAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAG 159 (272)
Q Consensus 94 ~~~g~~v~~~i~~~~~~SGah~NPavTl~~~~~g~~~~~~~~~yi~aQ~lGa~~a~~~~~~l~~~~ 159 (272)
+.+|+.+++.+++.+++||+|+|||+|+++++.+ .+|.+.|+||++|++|+++|+.+++.++.++
T Consensus 194 l~iGl~v~~~v~~~g~~TG~~~NPArtlgpai~~-~~~~~~wvy~vapilGailaa~l~~~l~~~~ 258 (274)
T PLN00183 194 FVIGIAIGLAVLITGPVSGGSMNPARSLGPAIVS-WDFKDIWIYITAPTIGAVAGALMFHLLRLRT 258 (274)
T ss_pred hHHHHHHHHHHHhccCCCCCEeCHHHHHHHHHhC-CChhheehHHHHHHHHHHHHHHHHHHHhccC
Confidence 7889999999999999999999999999999987 5799999999999999999999999998443
No 20
>KOG0223 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=99.77 E-value=5.6e-19 Score=153.30 Aligned_cols=137 Identities=20% Similarity=0.147 Sum_probs=109.0
Q ss_pred CCchhhhhhhhhhhhhccccccCCC--CCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCccchh
Q 024149 13 NKFAERQPIGTAAQTQDGKDYVEPP--PAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQ 90 (272)
Q Consensus 13 ~~Y~~aQ~~Ga~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~ 90 (272)
--|+.+|++|+++++...+...+.+ .............+..+.++.|++.||.|||..++......++ .
T Consensus 90 ~~Y~vaQ~lGa~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~E~ilTf~Lv~~v~~~a~d~~~~---------~ 160 (238)
T KOG0223|consen 90 VAYIVAQLLGAIAGAALLKVVTPGQYNRKGLGLTGLAPGLSTGQGLVIEIILTFILVFTVFATATDPRRS---------E 160 (238)
T ss_pred HHHHHHHHHHHHHHHHHHheecCcccccCCcceeccCCCCCcchhHHHHHHHHHHHhheeEEEeecCCCc---------c
Confidence 4699999999999999988888764 1122222222334568999999999999999876422211111 2
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCcccChHHHHHHHHhcCCCccchhHHhhhhhHHHHHHHHHHHHHhccc
Q 024149 91 GIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAG 159 (272)
Q Consensus 91 ~i~~~~g~~v~~~i~~~~~~SGah~NPavTl~~~~~g~~~~~~~~~yi~aQ~lGa~~a~~~~~~l~~~~ 159 (272)
..++.+|+.+.+.+++.+++||+++|||+++++++..+. |.++|+||++|++|+++++++++.++.++
T Consensus 161 ~a~l~IG~~v~~~~l~~g~~TG~sMNPArSfGpAvv~~~-w~~hwiYwvgP~~Ga~~a~~~y~~v~~~~ 228 (238)
T KOG0223|consen 161 LAPLAIGFSVGLNILAAGPFTGASMNPARSFGPAVVYGS-WDDHWIYWVGPLLGAILAALIYRLVFIPD 228 (238)
T ss_pred cHHHHHHHHHHHHHHeecCcCcCccCcHHHhhHHHHhcC-CCcEEEEEhhHHHHHHHHHHHHHHhccCc
Confidence 347899999999999999999999999999999998875 99999999999999999999999988443
No 21
>TIGR00861 MIP MIP family channel proteins. processes. Some members of the family, including the yeast FPS protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport both water and small solutes.
Probab=99.74 E-value=6.8e-18 Score=145.96 Aligned_cols=132 Identities=23% Similarity=0.191 Sum_probs=99.0
Q ss_pred CchhhhhhhhhhhhhccccccCCCCC-CCC-CCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCccchhH
Q 024149 14 KFAERQPIGTAAQTQDGKDYVEPPPA-PLF-EPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQG 91 (272)
Q Consensus 14 ~Y~~aQ~~Ga~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~ 91 (272)
-|+.+|++|+++++...+....+... +.. ........+.++.++.|+++|+++++.++.+... +++. .. + ..
T Consensus 81 ~y~~aQ~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~i~T~~lv~~~~~~~~~--~~~~--~~-~-~~ 154 (216)
T TIGR00861 81 VYIVAQLIGAILGAALLYGLTSGLFPGNLAVNGSGAAGVSSGQAFFVEFIGTAILVLVIFATTDP--RNRV--PR-G-GF 154 (216)
T ss_pred HHHHHHHHHHHHHHHHHHHHccccccCCccccCCCCCcccHHHHHHHHHHHHHHHHHHHheeecC--CCCC--CC-C-cc
Confidence 49999999999998876555433211 100 0011112367899999999999999987754432 1111 11 1 13
Q ss_pred HHHHHHHHHHHHHHHhcCCCCcccChHHHHHHHHhc-CCCccchhHHhhhhhHHHHHHHHH
Q 024149 92 IAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLAR-KLSLTRALFYMVMQCLGAICGAGV 151 (272)
Q Consensus 92 i~~~~g~~v~~~i~~~~~~SGah~NPavTl~~~~~g-~~~~~~~~~yi~aQ~lGa~~a~~~ 151 (272)
.++.+|+.++..+++.+++||+|+|||+++++++.+ ..+|.+.|+||++|++|+++++.+
T Consensus 155 ~~~~iG~~v~~~~~~~g~~sG~~~NPAr~l~~~l~~~~~~~~~~~vy~vap~~Ga~~a~~~ 215 (216)
T TIGR00861 155 APLAIGLLVFLIHLSMGPYTGTGMNPARSLGPALFAGLAGWGNHWVYWVGPIIGAILGALV 215 (216)
T ss_pred HHHHHHHHHHHHHHhCCCCcccccCchhhhhHHHHhccccccceeHHHHHHHHHHHHHHHh
Confidence 588999999999999999999999999999999976 578999999999999999999875
No 22
>PLN00184 aquaporin NIP1; Provisional
Probab=99.72 E-value=4.5e-17 Score=146.23 Aligned_cols=135 Identities=23% Similarity=0.250 Sum_probs=100.4
Q ss_pred CchhhhhhhhhhhhhccccccCCCCCCCCCC-----CCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCccc
Q 024149 14 KFAERQPIGTAAQTQDGKDYVEPPPAPLFEP-----GELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVG 88 (272)
Q Consensus 14 ~Y~~aQ~~Ga~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~ 88 (272)
.|+.+|++|+++++...+.+.........+. ......+.++.++.|+++|++|++.+++.... ++ .. +
T Consensus 134 ~YiiaQllGA~lga~~~~~l~~~~~~~~~~~~~~~~~t~p~~s~~~af~~E~i~TfvLv~~il~~~~~---~~-~~---~ 206 (296)
T PLN00184 134 AYVISQVIGSTLAAATLRLLFGLDHDVCSGKHDVFIGSSPVGSDLQAFVMEFIVTFYLMFIISGVATD---NR-AI---G 206 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcchhhccccccceeeccCcCCcHHHHHHHHHHHHHHHHHHHHheecc---Cc-CC---C
Confidence 5999999999999876544432111000000 00111357899999999999999988764321 11 10 1
Q ss_pred hhHHHHHHHHHHHHHHHHhcCCCCcccChHHHHHHHHhcCCCccchhHHhhhhhHHHHHHHHHHHHHhc
Q 024149 89 IQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMG 157 (272)
Q Consensus 89 ~~~i~~~~g~~v~~~i~~~~~~SGah~NPavTl~~~~~g~~~~~~~~~yi~aQ~lGa~~a~~~~~~l~~ 157 (272)
...++.+|+.++..+++.++.||+++|||+++++++... .|+..|+||++|++|+++|+++++.+..
T Consensus 207 -~~~~l~IG~~v~~~~~~~g~~TG~smNPAR~~GPal~~~-~~~~~WVy~vgPilGa~laal~y~~l~~ 273 (296)
T PLN00184 207 -ELAGLAIGSTVLLNVLIAAPVSSASMNPGRSLGPAMVYG-CYKGIWIYIVAPTLGAIAGAWVYNTVRY 273 (296)
T ss_pred -cchHHHHHHHHHHHHHHhcccCccccCchhhHHHHHHhh-cccccchHHhHHHHHHHHHHHHHHHHhc
Confidence 123688999999999999999999999999999999755 5789999999999999999999988873
No 23
>PRK05420 aquaporin Z; Provisional
Probab=99.67 E-value=3.8e-16 Score=136.17 Aligned_cols=135 Identities=19% Similarity=0.217 Sum_probs=100.4
Q ss_pred CchhhhhhhhhhhhhccccccCCCCC-CC----C-----CCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCC
Q 024149 14 KFAERQPIGTAAQTQDGKDYVEPPPA-PL----F-----EPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTK 83 (272)
Q Consensus 14 ~Y~~aQ~~Ga~~~~~~~~~~~~~~~~-~~----~-----~~~~~~~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~ 83 (272)
.|+.+|++|+++++..++...+++.. .. . ........+..+.++.|+++|++|++..+..... +.
T Consensus 83 ~Y~~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~T~iLv~~i~~~~~~--~~--- 157 (231)
T PRK05420 83 PYIIAQVVGGIAAAAVLYLIASGKAGFDLAGSGFASNGYGEHSPGGYSLLAALVCEVVLTAFFLLVILGATDK--RA--- 157 (231)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCccccccccccccccccccCCCCcccHHHHHHHHHHHHHHHHHHHHHHhCC--CC---
Confidence 59999999999999766544432111 00 0 0001122357899999999999999988755321 11
Q ss_pred CCccchhHHHHHHHHHHHHHHHHhcCCCCcccChHHHHHHHHhcC-CCccchhHHhhhhhHHHHHHHHHHHHHhc
Q 024149 84 CSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARK-LSLTRALFYMVMQCLGAICGAGVVKGFMG 157 (272)
Q Consensus 84 ~~~~~~~~i~~~~g~~v~~~i~~~~~~SGah~NPavTl~~~~~g~-~~~~~~~~yi~aQ~lGa~~a~~~~~~l~~ 157 (272)
.. + ..++.+|+.+....++.++.||+.+|||+++++++..+ ..+.+.|+||++|++|+++++++++.++.
T Consensus 158 ~~--~--~~p~~iGl~v~~~~~~~~~~TG~s~NPAR~~gpal~~g~~~~~~~wvy~vgP~~Ga~laa~~y~~l~~ 228 (231)
T PRK05420 158 PA--G--FAPIAIGLALTLIHLISIPVTNTSVNPARSTGVALFVGGWALEQLWLFWVAPIVGAIIGGLIYRLLLE 228 (231)
T ss_pred CC--c--chHHHHHHHHHHHHHHhhccCCCccCcHHHHHHHHHhCCCCccceEEeehHHHHHHHHHHHHHHHHhc
Confidence 11 1 24788999999999999999999999999999999753 44568999999999999999999888873
No 24
>PLN00166 aquaporin TIP2; Provisional
Probab=99.66 E-value=1.1e-15 Score=134.57 Aligned_cols=134 Identities=15% Similarity=0.144 Sum_probs=101.3
Q ss_pred CchhhhhhhhhhhhhccccccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCccchhHHH
Q 024149 14 KFAERQPIGTAAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIA 93 (272)
Q Consensus 14 ~Y~~aQ~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~i~ 93 (272)
-|+.+|++|+++++...+.+...+..+.... ....+.++.++.|+++|++|++..+......+ +.... ...+
T Consensus 103 ~y~~aq~lGa~~~a~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~E~v~Tf~Lv~~i~~~~~~~~--~~~~~----~~~p 174 (250)
T PLN00166 103 FYWIAQCLGSIVACLLLVFVTNGESVPTHGV--AAGLGAIEGVVMEIVVTFALVYTVYATAADPK--KGSLG----TIAP 174 (250)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCccccc--CCCCcHHHHHHHHHHHHHHHHHHHHHhccccc--ccccc----cchh
Confidence 4999999999999887655443221111111 11235689999999999999998775432111 10000 1237
Q ss_pred HHHHHHHHHHHHHhcCCCCcccChHHHHHHHHhcCCCccchhHHhhhhhHHHHHHHHHHHHHh
Q 024149 94 WAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFM 156 (272)
Q Consensus 94 ~~~g~~v~~~i~~~~~~SGah~NPavTl~~~~~g~~~~~~~~~yi~aQ~lGa~~a~~~~~~l~ 156 (272)
+.+|+.++..++..++.||+.+||||++++++..+ +|.+.|+||++|++|+++++++++.++
T Consensus 175 ~~iGl~v~~~~~~~~~~tG~~~NPAR~~gPal~~~-~~~~~wvywvgPi~Ga~~aa~~y~~l~ 236 (250)
T PLN00166 175 IAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSG-DFSQIWIYWVGPLVGGALAGLIYGDVF 236 (250)
T ss_pred HHHHHHHHHHHHcccCCCCCccCchHhhHHHHhcC-CCcccchhhHHHHHHHHHHHHHHHHHh
Confidence 88999999999999999999999999999999865 588999999999999999999988776
No 25
>PLN00027 aquaporin TIP; Provisional
Probab=99.65 E-value=1.3e-15 Score=134.55 Aligned_cols=135 Identities=18% Similarity=0.139 Sum_probs=101.2
Q ss_pred CchhhhhhhhhhhhhccccccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCccchhHHH
Q 024149 14 KFAERQPIGTAAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIA 93 (272)
Q Consensus 14 ~Y~~aQ~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~i~ 93 (272)
-|+.+|++|+++++...+...+.......... ...+.++.++.|+++||+|++.++...... ++ ... + ...+
T Consensus 105 ~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~E~i~Tf~Lv~~i~~~~~~~-~~-~~~---~-~~~p 176 (252)
T PLN00027 105 LYWIAQLLGSVVACLLLKFSTGGLETSAFSLS--SGVGVWNAFVFEIVMTFGLVYTVYATAVDP-KK-GDL---G-IIAP 176 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCcccccccCC--CCccHHHHHHHHHHHHHHHHHHHHHhcccc-cc-CCc---c-chHH
Confidence 59999999999998765443322111111111 123578999999999999999876543211 11 110 1 1347
Q ss_pred HHHHHHHHHHHHHhcCCCCcccChHHHHHHHHhcCCCccchhHHhhhhhHHHHHHHHHHHHHhc
Q 024149 94 WAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMG 157 (272)
Q Consensus 94 ~~~g~~v~~~i~~~~~~SGah~NPavTl~~~~~g~~~~~~~~~yi~aQ~lGa~~a~~~~~~l~~ 157 (272)
+.+|+.+....++.++.||+.+|||+++++++... .|.+.|+||++|++|+++|+++++.++.
T Consensus 177 ~~iGl~v~~~~~~~g~~TG~~~NPAR~~gPal~~~-~~~~~wvy~vgP~~Ga~laa~~y~~l~~ 239 (252)
T PLN00027 177 IAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW-TWTNHWVYWAGPLIGGGIAGLVYELIFI 239 (252)
T ss_pred HHHHHHHHHHHHhcccccccccCcchhHHHHHHhh-cchhhhHHHHHHHHHHHHHHHHHHHHhc
Confidence 88899999999999999999999999999999875 5889999999999999999999998873
No 26
>PLN00167 aquaporin TIP5; Provisional
Probab=99.63 E-value=2.2e-15 Score=133.06 Aligned_cols=137 Identities=18% Similarity=0.114 Sum_probs=101.7
Q ss_pred CchhhhhhhhhhhhhccccccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCccchhHHH
Q 024149 14 KFAERQPIGTAAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIA 93 (272)
Q Consensus 14 ~Y~~aQ~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~i~ 93 (272)
.|+.+|++|+++++...+........+.... ....+.++.++.|+++|++|++..+.... .+. ..... ..+
T Consensus 107 ~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~--~~~~s~~~~~~~E~i~T~~L~~~i~~~~~--~~~-~~~~~----~~p 177 (256)
T PLN00167 107 FYWISQMLASVMACLFLKVTTVGQHVPTYKI--AEEMTGFGASVLEGVLTFGLVYTVYAAGD--PRR-GLLGA----IGP 177 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcccccccccc--CcccchHHHHHHHHHHHHHHHHHHHHhcc--ccc-cCCCC----cch
Confidence 5999999999999877655533211111111 11234578999999999999998764322 111 11111 236
Q ss_pred HHHHHHHHHHHHHhcCCCCcccChHHHHHHHHhcCCCccchhHHhhhhhHHHHHHHHHHHHHhcccc
Q 024149 94 WAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQ 160 (272)
Q Consensus 94 ~~~g~~v~~~i~~~~~~SGah~NPavTl~~~~~g~~~~~~~~~yi~aQ~lGa~~a~~~~~~l~~~~~ 160 (272)
+.+|+.+....+..++.||+.+|||+++++.+..+ +|.+.|.||++|++|+++++++++.++.++.
T Consensus 178 l~iGl~v~~~~~~~g~~TG~a~NPAR~~gPal~~~-~~~~~wvywvgP~~Ga~l~a~~y~~l~~~~~ 243 (256)
T PLN00167 178 LAIGLVAGANVLAAGPFSGGSMNPACAFGSAVVAG-SFKNQAVYWVGPLLGGAVAGLLYDNVVFPTQ 243 (256)
T ss_pred HHHHHHHHHHHHhccCCCCcccCcccchHHHHhcc-CccCcEEEeHHHHHHHHHHHHHHHHHhCCCc
Confidence 88899999999999999999999999999999865 5788999999999999999999998885443
No 27
>PTZ00016 aquaglyceroporin; Provisional
Probab=99.62 E-value=2e-15 Score=135.81 Aligned_cols=136 Identities=19% Similarity=0.154 Sum_probs=98.6
Q ss_pred CchhhhhhhhhhhhhccccccCCC-----C---------CC---CCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 024149 14 KFAERQPIGTAAQTQDGKDYVEPP-----P---------AP---LFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMG 76 (272)
Q Consensus 14 ~Y~~aQ~~Ga~~~~~~~~~~~~~~-----~---------~~---~~~~~~~~~~~~~~~~~aE~igT~~lv~~~~~~~~~ 76 (272)
.|+.+|++|+++++..++...++. . .. ...+ ....+..+.++.|+++|++|++.++....
T Consensus 130 ~YiiaQ~lGa~~ga~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t--~p~~s~~~a~~~E~i~T~iLv~~ila~~d- 206 (294)
T PTZ00016 130 GYFVAQLLGAFVGAACVYGLYYGFFKDHGIPELPWETMANGFAGVFAT--YPREGNFYAIFSELILTAILLLVILAITD- 206 (294)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHhhcCcccccccccccccceeeC--CCCccHHHHHHHHHHHHHHHHHHHHHhcc-
Confidence 599999999999988754432210 0 00 0000 11245689999999999999998875532
Q ss_pred ccccCCCCCccchhHHHHHHHHHHHHHHHHhcCCCCcccChHHHHHHHHhc-----CCCcc----chhHHhhhhhHHHHH
Q 024149 77 VVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLAR-----KLSLT----RALFYMVMQCLGAIC 147 (272)
Q Consensus 77 ~~~~~~~~~~~~~~~i~~~~g~~v~~~i~~~~~~SGah~NPavTl~~~~~g-----~~~~~----~~~~yi~aQ~lGa~~ 147 (272)
.+++ ... + ..++.+|+.+..+.++.++.||+.+|||+++++++.. +..|. +.|+||++|++|+++
T Consensus 207 -~~~~-~~~--~--~~pl~IGl~v~~i~~~~g~~TG~smNPAR~fGPal~~~~~~g~~~~~~~~~~~WVy~vgP~vGa~~ 280 (294)
T PTZ00016 207 -PNNC-PAF--N--YLPVAVGLLVFVIGISFGGNTGYALNPARDLGPRLFSAILWGSEVFTKDNYYFWVPLVAPFVGAVL 280 (294)
T ss_pred -CccC-CCc--C--cccHHHHHHHHHHHHhccCCCCCcccchhhHHHHHHHHHhccccccCcCCceeeeeehHHHHHHHH
Confidence 1111 101 1 1367889888888999999999999999999999963 33454 589999999999999
Q ss_pred HHHHHHHHhcc
Q 024149 148 GAGVVKGFMGA 158 (272)
Q Consensus 148 a~~~~~~l~~~ 158 (272)
|+++++.+.++
T Consensus 281 aally~~ll~~ 291 (294)
T PTZ00016 281 GMFLYDKFIPP 291 (294)
T ss_pred HHHHHHHHhCC
Confidence 99999888744
No 28
>PF00230 MIP: Major intrinsic protein; InterPro: IPR000425 A number of transmembrane (TM) channel proteins can be grouped together on the basis of sequence similarities [, , , , ]. These include: Mammalian major intrinsic protein (MIP). MIP is the major component of lens fibre gap junctions. Mammalian aquaporins []. These proteins form water- specific channels that provide the plasma membranes of red cells and kidney prox imal and collecting tubules with high permeability to water, thereby permitting water to move in the direction of an osmotic gradient. Soybean nodulin-26, a major component of the peribacteroid membrane induced during nodulation in legume roots after Rhizobium infection. Plants tonoplast intrinsic proteins (TIP). There are various isoforms of TIP : alpha (seed), gamma, Rt (root), and Wsi (water-stress induced). These proteins may allow the diffusion of water, amino acids and/or peptides from the tonoplas t interior to the cytoplasm. Bacterial glycerol facilitator protein (gene glpF), which facilitates the mo vement of glycerol across the cytoplasmic membrane. Salmonella typhimurium propanediol diffusion fac ilitator (gene pduF). Yeast FPS1, a glycerol uptake/efflux facilitator protein. Drosophila neurogenic protein 'big brain' (bib). This protein may mediate in tercellular communication; it may functions by allowing the transport of certain molecules(s) and thereby sending a signal for an exodermal cell to become an ep idermoblast instead of a neuroblast. Yeast hypothetical protein YFL054c. A hypothetical protein from the pepX region of Lactococcus lactis. The structures of various members of the MIP family have been determined by means of X-ray diffraction [, , ], revealing the fold to comprise a right-handed bundle of 6 transmembrane (TM) alpha-helices [, , ]. Similarities in the N-and C-terminal halves of the molecule suggest that the proteins may have arisen through tandem, intragenic duplication of an ancestral protein that contained 3 TM domains []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins []. Aquaporin-CHIP (Aquaporin 1) belongs to the Colton blood group system and is associated with Co(a/b) antigen.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3NE2_A 2C32_A 1YMG_A 2B6P_A 3C02_A 2B5F_D 3CN6_A 3CN5_A 1Z98_M 3CLL_A ....
Probab=99.61 E-value=2.7e-15 Score=130.54 Aligned_cols=132 Identities=22% Similarity=0.200 Sum_probs=97.9
Q ss_pred CchhhhhhhhhhhhhccccccCCC--CCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCccchhH
Q 024149 14 KFAERQPIGTAAQTQDGKDYVEPP--PAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQG 91 (272)
Q Consensus 14 ~Y~~aQ~~Ga~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~ 91 (272)
.|+.+|++|+++++...+...++. .............+..+.++.|+++|++|++......... ++.. .+. .
T Consensus 94 ~Yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~t~il~~~i~~~~~~~--~~~~---~~~-~ 167 (227)
T PF00230_consen 94 VYIIAQFLGAFLGALLVYALYPDSNSAAGIFATTPPPGISLGQAFFSEFIGTFILVLVILAVADDK--RKFP---LGP-L 167 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSTHHHTCTTTTSCGSTTTSSHHHHHHHHHHHHHHHHHHHHHHTSTT--SSST---SSG-G
T ss_pred eEEeeccccccccccchhhcccCcccccccccccccccchhhhhhhhhhhhhhHHHhhhhhhcccc--cccc---ccc-c
Confidence 499999999999998765555442 1222221222334678999999999999998776543321 1111 111 2
Q ss_pred HHHHHHHHHHHHHHHhcCCCCcccChHHHHHHHHhcCCCccchhHHhhhhhHHHHHHHHHH
Q 024149 92 IAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVV 152 (272)
Q Consensus 92 i~~~~g~~v~~~i~~~~~~SGah~NPavTl~~~~~g~~~~~~~~~yi~aQ~lGa~~a~~~~ 152 (272)
.++.+|+.+....+..++.||+.+|||+++++.+.... |.+.|+||++|++|+++|++++
T Consensus 168 ~p~~ig~~v~~~~~~~~~~tG~~~NPAr~~g~~l~~~~-~~~~wvy~~~P~~Ga~~a~~~Y 227 (227)
T PF00230_consen 168 APLAIGLTVGALVLAGGPYTGASLNPARALGPALFSGI-WDYFWVYWVGPFIGAILAALLY 227 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHHHST-SSHHHHHHHHHHHTH-HTTTTHHHHHHHHHHHHHHHHH
T ss_pred cceeEEEEEeecccccccccccccCchhhcCceeeccc-CCeEEEEEehHHHHHHHHHhhC
Confidence 47888888888888889999999999999999998775 8999999999999999999874
No 29
>COG0580 GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]
Probab=99.59 E-value=8.4e-15 Score=127.03 Aligned_cols=136 Identities=21% Similarity=0.159 Sum_probs=98.8
Q ss_pred CCchhhhhhhhhhhhhccccccCCCC-------CCCCCC--CCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCC
Q 024149 13 NKFAERQPIGTAAQTQDGKDYVEPPP-------APLFEP--GELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTK 83 (272)
Q Consensus 13 ~~Y~~aQ~~Ga~~~~~~~~~~~~~~~-------~~~~~~--~~~~~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~ 83 (272)
-+|+.+|++|+++++.++.....+.. ....+. ......+..+.++.|+++||+|++.+.+.... ++.
T Consensus 87 ~~YivAQ~lGA~~ga~l~~~~~~~~~~~~~~~~~~~~g~~~t~p~~~~~~~~fl~E~v~T~~L~~~Ila~~~~---~~~- 162 (241)
T COG0580 87 LPYIVAQVLGAFAGAALLYLLYYGKILETEGDPLASLGAFSTSPGGYSLGQAFLIEFVGTFVLVLGILALTDD---GNA- 162 (241)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhHhhcCCchhhccccccCCCcccHHHHHHHHHHHHHHHHHHHHHhhcc---Ccc-
Confidence 36999999999999876533322211 111111 12223367899999999999999987654321 111
Q ss_pred CCccchhHHHHHHHHHHHHHHHHhcCCCCcccChHHHHHHHHhcC----CCc----cchhHHhhhhhHHHHHHHHHHHHH
Q 024149 84 CSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARK----LSL----TRALFYMVMQCLGAICGAGVVKGF 155 (272)
Q Consensus 84 ~~~~~~~~i~~~~g~~v~~~i~~~~~~SGah~NPavTl~~~~~g~----~~~----~~~~~yi~aQ~lGa~~a~~~~~~l 155 (272)
+.+ ..++.+|+.++.+.++.++.||..+||||++++.+... .+. .+.|+||++|++|+++|+++++.+
T Consensus 163 --~~~--~apl~iGllv~~i~~s~g~~TG~aiNPARdlGprl~~~~~g~~~~~g~~~y~wipvigpiiGa~lg~~~~~~~ 238 (241)
T COG0580 163 --NAG--FAPLAIGLLVTAIGLSLGPTTGTAINPARDLGPRLAHSLAGWAANKGDSSYFWIPVIGPIVGAILGALLYKLL 238 (241)
T ss_pred --ccc--chHHHHHHHHHHHHHHhcCCCCCccChHHHHHHHHHHHhcCcccCCCCCCeEeeeehHHHHHHHHHHHHHHHH
Confidence 111 23789999999999999999999999999999999321 222 479999999999999999999876
Q ss_pred h
Q 024149 156 M 156 (272)
Q Consensus 156 ~ 156 (272)
+
T Consensus 239 ~ 239 (241)
T COG0580 239 L 239 (241)
T ss_pred c
Confidence 5
No 30
>KOG0224 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=98.80 E-value=7e-09 Score=91.73 Aligned_cols=137 Identities=18% Similarity=0.142 Sum_probs=95.7
Q ss_pred CCchhhhhhhhhhhhhccc--------cccCCCC--------CCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 024149 13 NKFAERQPIGTAAQTQDGK--------DYVEPPP--------APLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMG 76 (272)
Q Consensus 13 ~~Y~~aQ~~Ga~~~~~~~~--------~~~~~~~--------~~~~~~~~~~~~~~~~~~~aE~igT~~lv~~~~~~~~~ 76 (272)
..|+.+|.+||.+|+..+. ++..... ...+.+-....-++++.++-||+||.+|+...+. ..
T Consensus 112 p~Y~~aQ~iGAF~gaa~~y~~y~d~i~~f~Gg~~~vtgp~aTAgiFaTyP~p~ls~~n~F~DqfigTa~L~~~l~a--I~ 189 (316)
T KOG0224|consen 112 PVYVLAQFIGAFLGAATVYGLYYDAINEFDGGNRTVTGPKATAGIFATYPAPHLSLWNGFFDQFIGTAMLVLCLFA--IT 189 (316)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEecCCccceEEEeecCchHhhhhHHHHHHHHHHHHHHhheeE--Ee
Confidence 3599999999999987642 1111111 1112222223347899999999999999876543 22
Q ss_pred ccccCCCCCccchhHHHHHHHHHHHHHHHHhcCCCCcccChHHHHHHHHhc------C--CCc--cchhHHhhhhhHHHH
Q 024149 77 VVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLAR------K--LSL--TRALFYMVMQCLGAI 146 (272)
Q Consensus 77 ~~~~~~~~~~~~~~~i~~~~g~~v~~~i~~~~~~SGah~NPavTl~~~~~g------~--~~~--~~~~~yi~aQ~lGa~ 146 (272)
+.+++ .... ..++.+|+.++++-.+.+-.+|--+|||+.+++.+.. . +++ ...|+-++++++|++
T Consensus 190 D~rN~-~p~g----~~p~~iG~lv~~Ig~s~G~N~GyaiNPARDlgPRlF~~~aGyG~~vF~~~~~~~WvPivgPl~Gai 264 (316)
T KOG0224|consen 190 DKRNP-IPTG----LHPLVIGILVVAIGMSLGYNTGYAINPARDLGPRLFTSIAGYGPEVFSAGHNWWWVPIVGPLIGAI 264 (316)
T ss_pred cCCCC-CCcc----hhHHHHHHHHHHHHHHhhcccCcccCcccccchHHHHHHHhcchhhcccCCceeeeeehhhhhhhh
Confidence 33331 1111 3478899999999999999999999999999998861 1 111 345677999999999
Q ss_pred HHHHHHHHHh
Q 024149 147 CGAGVVKGFM 156 (272)
Q Consensus 147 ~a~~~~~~l~ 156 (272)
+|++++..+.
T Consensus 265 ~G~~iY~~~I 274 (316)
T KOG0224|consen 265 LGGWIYDFFI 274 (316)
T ss_pred hhhhhheeee
Confidence 9999998776
No 31
>PRK10805 formate transporter; Provisional
Probab=56.99 E-value=1.5e+02 Score=26.73 Aligned_cols=103 Identities=14% Similarity=0.161 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHHHHhcC-CCCcccChHHHHHHHHhcCCCccchhHHhhhhhHHHHHHHHHHHHHhc-cccccccCCC---
Q 024149 93 AWAFGGMIFVLVYCTAG-ISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMG-AGQYGRLAGG--- 167 (272)
Q Consensus 93 ~~~~g~~v~~~i~~~~~-~SGah~NPavTl~~~~~g~~~~~~~~~yi~aQ~lGa~~a~~~~~~l~~-~~~~~~~~~~--- 167 (272)
++.+.+.+.++++.-.. .|| |-..++ ..+.++.++.+..-.|.--.+|=++|++++-.+.. ........+.
T Consensus 72 ~~~F~vGlilIvl~g~eLFTg---n~l~~~-~~~~~~~~~~~~lr~w~iv~~GNliGal~~a~l~~~s~~~~~~~~~~~~ 147 (285)
T PRK10805 72 GICFSLGLILCVVCGADLFTS---TVLIVV-AKASGRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYMTANGQWGL 147 (285)
T ss_pred HHHHHHHHHHHHHhCcccchh---hHHHHH-HHHcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccCccHHHH
Confidence 45555556556654444 344 555554 35778888888774444444444444444433320 1111110000
Q ss_pred -cccc---cccCCccchhhHHHHHHHHHHHHHHHhc
Q 024149 168 -ANVV---AHGYTKGDGLGAEIIGTFVLVYTVFSAT 199 (272)
Q Consensus 168 -~~~~---~~~~~~~~~f~~E~~~T~iL~~~il~~~ 199 (272)
.... .-+.+..+.|+-=+.|.++.++.++...
T Consensus 148 ~~~~~a~~K~~~~~~~~f~~gI~CN~lVclaV~~~~ 183 (285)
T PRK10805 148 NVLQTADHKVHHTFIEAVCLGILANLMVCLAVWMSY 183 (285)
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0001 1234567788888889999888887543
No 32
>PF01226 Form_Nir_trans: Formate/nitrite transporter; InterPro: IPR000292 Proteins in this entry belong to the Formate-Nitrite Transporter (FNT) family (TC 2.A.44). The prokaryotic proteins of the FNT family probably function in the transport of the structurally related compounds, formate and nitrite. The homologous yeast protein may function as a short chain aliphatic carboxylate H+ symporter, transporting formate, acetate and propionate, and functioning primarily as an acetate uptake permease.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3Q7K_H 3KLY_E 3KLZ_A 3TDX_C 3TE2_B 3TDS_B 3TDR_E 3TDO_C 3TE1_B 3TDP_C ....
Probab=53.35 E-value=1.6e+02 Score=25.92 Aligned_cols=109 Identities=14% Similarity=0.007 Sum_probs=60.3
Q ss_pred hHHHHHHHHHHHHHHHHhcCCCCcccChHHHHHHHHhcCCCccchhHHhhhhhHHHHHHHHHHHHHhccccccccCCC--
Q 024149 90 QGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGG-- 167 (272)
Q Consensus 90 ~~i~~~~g~~v~~~i~~~~~~SGah~NPavTl~~~~~g~~~~~~~~~yi~aQ~lGa~~a~~~~~~l~~~~~~~~~~~~-- 167 (272)
+..++.+++.+..+++.-+..-- =|-.......+.++.+|++.+--|.--.+|=++|++++-.+.........++.
T Consensus 58 l~~g~~F~~Gl~lIv~~g~eLfT--gn~~~~~~~~~~~~~~~~~~l~~w~~v~~gNliG~~~~a~l~~~~~~~~~~~~~~ 135 (250)
T PF01226_consen 58 LVGGLVFPIGLVLIVFLGGELFT--GNMMVMTLALLNKRISWKKLLRNWGIVYLGNLIGALLFAYLFAFSGGFMSSPAMG 135 (250)
T ss_dssp HHHHHHHTHHHHHHHHHT---TT--TTCHHHHHHHCTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTGGGTTTHHH
T ss_pred HHHHHHHHHHHHHHHHhcchhcc--cchHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccHHHH
Confidence 33456666666666654433211 15555556667888898887766666666666666666555411111110000
Q ss_pred --cc---cccccCCccchhhHHHHHHHHHHHHHHHhcc
Q 024149 168 --AN---VVAHGYTKGDGLGAEIIGTFVLVYTVFSATD 200 (272)
Q Consensus 168 --~~---~~~~~~~~~~~f~~E~~~T~iL~~~il~~~~ 200 (272)
.. ...-+.+..+.|+.=..|.++.++.++....
T Consensus 136 ~~~~~~a~~K~~~~~~~~f~~gI~cN~lVclav~~~~~ 173 (250)
T PF01226_consen 136 EYLISVAEHKVSHTFWELFFRGILCNWLVCLAVWLAFA 173 (250)
T ss_dssp HHHHHHHHCCSSS-HHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 00 0112345677888888999999998886543
No 33
>TIGR00790 fnt formate/nitrite transporter. symport. HCO2 - efflux may be driven by the membrane potential by a uniport mechanism or by H+ antiport.
Probab=51.98 E-value=1.6e+02 Score=25.63 Aligned_cols=82 Identities=18% Similarity=0.125 Sum_probs=46.4
Q ss_pred ChHHHHHHHHhcCCCccchhHHhhhhhHHHHHHHHHHHHHhccc-cc-cccCC---Cccc---ccccCCccchhhHHHHH
Q 024149 116 NPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAG-QY-GRLAG---GANV---VAHGYTKGDGLGAEIIG 187 (272)
Q Consensus 116 NPavTl~~~~~g~~~~~~~~~yi~aQ~lGa~~a~~~~~~l~~~~-~~-~~~~~---~~~~---~~~~~~~~~~f~~E~~~ 187 (272)
|-......++.++.+|.+.+-.|.--.+|=++|+++.-.+.... .. +..+. .... ..-+.+..+.|+.=+.|
T Consensus 68 n~~~~~~~~~~~~~~~~~~l~~w~~~~~gNlvG~~~~a~l~~~~~~~~~~~~~~~~~~~~~a~~K~~~~~~~~f~~gilc 147 (239)
T TIGR00790 68 NTLFVTMALLRGKISWGDLLINWVVSWLGNLVGALFVAYLFSYLGGILTANGPWGVGSLAIAEHKAHHTFVEAFFLGILC 147 (239)
T ss_pred chHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCccHHHHHHHHHHHHhhcCCHHHHHHHHHHH
Confidence 44444445668888888877776666666666666665544111 10 00000 0000 01234567778888888
Q ss_pred HHHHHHHHHH
Q 024149 188 TFVLVYTVFS 197 (272)
Q Consensus 188 T~iL~~~il~ 197 (272)
.++..+.++.
T Consensus 148 n~lV~lav~~ 157 (239)
T TIGR00790 148 NWLVCLAVWM 157 (239)
T ss_pred HHHHHHHHHH
Confidence 8888887765
No 34
>COG2116 FocA Formate/nitrite family of transporters [Inorganic ion transport and metabolism]
Probab=39.17 E-value=2.8e+02 Score=24.76 Aligned_cols=143 Identities=17% Similarity=0.129 Sum_probs=75.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCccchhHHHHHHHHHHHHHHHHhcCCCCcccChHHHHHHHHhcCCC
Q 024149 51 SFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLS 130 (272)
Q Consensus 51 ~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~v~~~i~~~~~~SGah~NPavTl~~~~~g~~~ 130 (272)
.++++.++-+.-++-+++.... ... .+....+...+.-++.+++.+.+.+++-+..--+ |--........++++
T Consensus 30 ~~l~ai~AG~~i~lg~~~~~~~---~~~-~~~~~~~~~~lvg~~~F~~GLilVv~~g~ELfT~--n~m~~t~~~~~k~Is 103 (265)
T COG2116 30 LLLLAILAGAFIGLGFLFYITV---GTG-LPGAPGGLAKLVGGLVFSLGLILVVIAGSELFTS--NTMLLTVGVLSKKIS 103 (265)
T ss_pred HHHHHHHHHHHHHHHHHHHHhh---ccc-CCCCCcchHHHHHHHHHHHHHHHhhhhCcccccc--chhHHHHHHHhCCcc
Confidence 4566666665555544443211 111 1111112233444566666666666654432111 333334445578899
Q ss_pred ccchhHHhhhhhHHHHHHHHHHHHHhccccccccCCCcc---c--c---cccCCccchhhHHHHHHHHHHHHHHHhc
Q 024149 131 LTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGAN---V--V---AHGYTKGDGLGAEIIGTFVLVYTVFSAT 199 (272)
Q Consensus 131 ~~~~~~yi~aQ~lGa~~a~~~~~~l~~~~~~~~~~~~~~---~--~---~~~~~~~~~f~~E~~~T~iL~~~il~~~ 199 (272)
|++.+--|.--.+|=++|++++-.++.-........+.. . . .-+.+..+.|+.=.+|.++.++.++..-
T Consensus 104 ~~~ll~~w~~v~lgNliGa~~~a~l~~~~g~~~~~~~~~~~~~~~~a~~K~~~t~~~~F~~GI~cN~lVclAvwm~~ 180 (265)
T COG2116 104 WGQLLRNWLVVYLGNLIGALFVALLFHLSGFNLTANGQWGLFVLGVAEHKLHHTFLEAFAKGILCNWLVCLAVWMSY 180 (265)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccchhHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 988877777777777777777766651111111111111 0 1 1123446778888888888888887654
No 35
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=35.27 E-value=12 Score=28.84 Aligned_cols=19 Identities=32% Similarity=0.506 Sum_probs=16.7
Q ss_pred CCCcccChHHHHHHHHhcC
Q 024149 110 ISGGHINPAVTLGLFLARK 128 (272)
Q Consensus 110 ~SGah~NPavTl~~~~~g~ 128 (272)
-|+||+||.+.++..+..+
T Consensus 7 Gt~Ghv~P~lala~~L~~r 25 (139)
T PF03033_consen 7 GTRGHVYPFLALARALRRR 25 (139)
T ss_dssp SSHHHHHHHHHHHHHHHHT
T ss_pred CChhHHHHHHHHHHHHhcc
Confidence 3789999999999999664
No 36
>TIGR02762 TraL_TIGR type IV conjugative transfer system protein TraL. This protein is part of the type IV secretion system for conjugative plasmid transfer. The function of the TraL protein is unknown.
Probab=34.55 E-value=8.4 Score=28.76 Aligned_cols=19 Identities=11% Similarity=-0.076 Sum_probs=15.1
Q ss_pred hCCCCCCCcceeEeecccc
Q 024149 249 YNKDRGWDDHVRLIYSFHY 267 (272)
Q Consensus 249 ~~~~~~w~~~wvy~~g~~~ 267 (272)
.++...|-+|+.||.+|.-
T Consensus 61 ~g~~~~~l~h~~YW~~p~~ 79 (95)
T TIGR02762 61 GGEGENFLLHLFYWYLPGS 79 (95)
T ss_pred cCCChhHHHHHHHHHcccc
Confidence 3456789999999988864
No 37
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=30.04 E-value=13 Score=34.37 Aligned_cols=21 Identities=33% Similarity=0.616 Sum_probs=17.8
Q ss_pred hcCCCCcccChHHHHHHHHhc
Q 024149 107 TAGISGGHINPAVTLGLFLAR 127 (272)
Q Consensus 107 ~~~~SGah~NPavTl~~~~~g 127 (272)
.++-||||+.||+.++-.+..
T Consensus 7 ~~GGTGGHi~Pala~a~~l~~ 27 (352)
T PRK12446 7 TGGGSAGHVTPNLAIIPYLKE 27 (352)
T ss_pred EcCCcHHHHHHHHHHHHHHHh
Confidence 455699999999999999864
No 38
>PF14034 Spore_YtrH: Sporulation protein YtrH
Probab=28.78 E-value=1.1e+02 Score=23.22 Aligned_cols=45 Identities=18% Similarity=0.306 Sum_probs=37.3
Q ss_pred CcccChHHHHHHHHhcC--CCccchhHHhhhhhHHHHHHHHHHHHHh
Q 024149 112 GGHINPAVTLGLFLARK--LSLTRALFYMVMQCLGAICGAGVVKGFM 156 (272)
Q Consensus 112 Gah~NPavTl~~~~~g~--~~~~~~~~yi~aQ~lGa~~a~~~~~~l~ 156 (272)
||-|+|-..+-.-+.++ .+..|..+|+++-++||=.|..+++++.
T Consensus 53 GGTfd~~~~iE~g~~~G~~~~~~KQ~l~Il~Af~GA~~g~~lI~wl~ 99 (102)
T PF14034_consen 53 GGTFDTFRSIEKGFFEGELSDIIKQLLYILSAFLGAHTGYILIRWLT 99 (102)
T ss_pred hcCchHHHHHHhHhcCCchHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 57888888887766433 3677999999999999999999999886
No 39
>COG0730 Predicted permeases [General function prediction only]
Probab=25.60 E-value=4.3e+02 Score=22.82 Aligned_cols=30 Identities=20% Similarity=0.211 Sum_probs=24.1
Q ss_pred hcCCCccchhHHhhhhhHHHHHHHHHHHHH
Q 024149 126 ARKLSLTRALFYMVMQCLGAICGAGVVKGF 155 (272)
Q Consensus 126 ~g~~~~~~~~~yi~aQ~lGa~~a~~~~~~l 155 (272)
.++.+|+....+..+-++|+++|+.+...+
T Consensus 68 ~~~v~~~~~~~l~~~~~~G~~lG~~l~~~~ 97 (258)
T COG0730 68 RGNVDWKLALILLLGALIGAFLGALLALLL 97 (258)
T ss_pred cCCccHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 456789999999999999999997666543
No 40
>PHA02885 putative interleukin binding protein; Provisional
Probab=22.65 E-value=45 Score=25.38 Aligned_cols=21 Identities=5% Similarity=-0.096 Sum_probs=12.8
Q ss_pred HHHhCCCCCCCcceeEeeccc
Q 024149 246 AIIYNKDRGWDDHVRLIYSFH 266 (272)
Q Consensus 246 ~l~~~~~~~w~~~wvy~~g~~ 266 (272)
|+++.+.-.=+.-+|||++|-
T Consensus 49 rllcs~~lnsedgyiywi~pn 69 (135)
T PHA02885 49 RLLCSGCLNSEDGYIYWIGPN 69 (135)
T ss_pred hheeeeeecCCCceEEEEeCC
Confidence 344433233456789999985
Done!