Query 024149
Match_columns 272
No_of_seqs 197 out of 1767
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 03:14:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024149.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024149hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3cn5_A Aquaporin; membrane pro 100.0 3E-54 1E-58 386.5 11.8 239 31-270 39-277 (304)
2 3gd8_A Aquaporin-4; proton exc 100.0 1E-50 3.6E-55 350.3 14.7 210 51-270 2-211 (223)
3 3iyz_A Aquaporin-4; water tran 100.0 5.3E-50 1.8E-54 361.2 18.0 213 48-270 47-259 (340)
4 3llq_A Aquaporin Z 2; aquapori 100.0 2.1E-50 7.2E-55 353.5 12.1 213 49-270 26-243 (256)
5 1j4n_A Aquaporin 1; membrane p 100.0 1.8E-49 6E-54 351.7 18.0 217 45-270 3-223 (271)
6 2zz9_A Aquaporin-4; water tran 100.0 2.2E-49 7.5E-54 354.2 16.8 215 46-270 6-220 (301)
7 2b6o_A Aquaporin-0, lens fiber 100.0 1.6E-48 5.4E-53 344.2 19.2 211 46-270 3-213 (263)
8 2w2e_A AQY1, aquaporin, aquapo 100.0 3.5E-48 1.2E-52 344.1 17.6 209 50-270 42-254 (279)
9 3d9s_A Aquaporin-5, AQP-5; aqu 100.0 9.5E-49 3.2E-53 345.8 13.2 211 46-270 5-216 (266)
10 2o9g_A Aquaporin Z; integral m 100.0 1E-48 3.4E-53 340.3 12.4 210 52-270 4-220 (234)
11 2f2b_A Aquaporin AQPM; protein 100.0 1.2E-47 4E-52 336.2 14.5 215 51-270 3-234 (246)
12 1ldf_A Glycerol uptake facilit 100.0 4.8E-48 1.6E-52 344.5 11.0 214 50-270 5-245 (281)
13 3c02_A Aquaglyceroporin; membr 100.0 6.8E-48 2.3E-52 339.6 9.7 214 50-270 7-232 (258)
14 2f2b_A Aquaporin AQPM; protein 99.8 3.7E-20 1.3E-24 161.7 9.9 135 14-156 102-244 (246)
15 2b6o_A Aquaporin-0, lens fiber 99.7 2.6E-17 9E-22 144.8 13.1 136 14-157 88-224 (263)
16 2o9g_A Aquaporin Z; integral m 99.7 9E-18 3.1E-22 145.5 9.9 135 14-157 86-231 (234)
17 2w2e_A AQY1, aquaporin, aquapo 99.7 1.8E-17 6E-22 146.9 11.4 133 14-156 132-264 (279)
18 3llq_A Aquaporin Z 2; aquapori 99.7 1.4E-17 4.8E-22 145.6 9.1 134 14-156 111-253 (256)
19 3d9s_A Aquaporin-5, AQP-5; aqu 99.7 2.3E-17 8E-22 145.2 9.5 136 14-157 90-227 (266)
20 3iyz_A Aquaporin-4; water tran 99.7 6E-17 2E-21 146.0 11.8 137 14-158 134-271 (340)
21 2zz9_A Aquaporin-4; water tran 99.7 4.9E-17 1.7E-21 145.1 10.7 137 13-157 94-231 (301)
22 3gd8_A Aquaporin-4; proton exc 99.7 5.1E-17 1.7E-21 139.8 9.0 135 14-156 86-221 (223)
23 1j4n_A Aquaporin 1; membrane p 99.7 6.7E-17 2.3E-21 142.8 9.7 136 14-157 98-234 (271)
24 3cn5_A Aquaporin; membrane pro 99.7 2.2E-17 7.5E-22 147.7 6.3 142 14-158 144-289 (304)
25 1ldf_A Glycerol uptake facilit 99.6 3.4E-16 1.2E-20 139.0 7.8 138 14-157 88-256 (281)
26 3c02_A Aquaglyceroporin; membr 99.6 7E-16 2.4E-20 135.4 7.3 138 14-156 90-242 (258)
27 3kcu_A Probable formate transp 55.9 99 0.0034 26.6 11.8 106 90-199 69-183 (285)
28 3tds_E Formate/nitrite transpo 42.1 1.4E+02 0.0048 25.4 9.0 107 90-199 65-178 (268)
29 3s2u_A UDP-N-acetylglucosamine 38.2 3.5 0.00012 36.6 -1.9 21 108-128 9-29 (365)
30 4fc4_A Nitrite transporter NIR 33.9 2.1E+02 0.0073 24.1 9.1 105 90-199 59-172 (261)
No 1
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A
Probab=100.00 E-value=3e-54 Score=386.50 Aligned_cols=239 Identities=73% Similarity=1.228 Sum_probs=192.9
Q ss_pred ccccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCccchhHHHHHHHHHHHHHHHHhcCC
Q 024149 31 KDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGI 110 (272)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~v~~~i~~~~~~ 110 (272)
|+.+++++.+..+.+|.++++++|++++||+||++|+|++++++.+.....++....+++.+++++|+.+++.+++++++
T Consensus 39 ~~~~~~~~~~~~~~~e~~~~~~~r~~lAEfiGT~lLv~~g~gsv~~~~~~~~~~~~~g~l~iala~Glav~~~v~~~g~i 118 (304)
T 3cn5_A 39 KDYVDPPPAPFFDLGELKLWSFWRAAIAEFIATLLFLYITVATVIGHSKETVVCGSVGLLGIAWAFGGMIFVLVYCTAGI 118 (304)
T ss_dssp ----------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSTTCSCHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred CCccCCCcccccCccccccHHHHHHHHHHHHHHHHHHHHHhHHHeEeccccCCCCCCCceeehhhhhhhhheeeeEeecc
Confidence 56666666666777888899999999999999999999999888765433333344578889999999999999999999
Q ss_pred CCcccChHHHHHHHHhcCCCccchhHHhhhhhHHHHHHHHHHHHHhccccccccCCCcccccccCCccchhhHHHHHHHH
Q 024149 111 SGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFV 190 (272)
Q Consensus 111 SGah~NPavTl~~~~~g~~~~~~~~~yi~aQ~lGa~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~E~~~T~i 190 (272)
||||+|||||++.++.|+++|++++.||++|++||++|+++++.++ ++.++..+.+.+.+.++.+..++|+.|+++||+
T Consensus 119 SGaHlNPAVTla~~l~g~~~~~~~~~YiiAQ~lGAi~Ga~lv~~~~-~~~~~~~~~g~~~~~~~~s~~~~f~~E~i~Tfi 197 (304)
T 3cn5_A 119 SGGHINPAVTFGLFLARKVELLRALVYMIAQCLGAICGVGLVKAFM-KGPYNQFGGGANSVALGYNKGTALGAEIIGTFV 197 (304)
T ss_dssp TCCCCSHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHC-HHHHHHTTTTCCCCCTTCCHHHHHHHHHHHHHH
T ss_pred CCCccCcHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHh-hhhhhhccCcccccCCCccHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999998 444555444555556678889999999999999
Q ss_pred HHHHHHHhccccccCCCCCCCcchhHHHHHHHHHHHHHhcCCCcCccchhhhHHHHHHhCCCCCCCcceeEeeccccCCC
Q 024149 191 LVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHVRLIYSFHYPKI 270 (272)
Q Consensus 191 L~~~il~~~~~~~~~~~~~~~~~~p~~ig~~v~~~~~~~~~~tG~~lNPAR~~gp~l~~~~~~~w~~~wvy~~g~~~~~~ 270 (272)
|+++|+.++|+++...++..+.+.|+.||+++++++++++++||++||||||||||++++++.+|+++||||+||.+|.+
T Consensus 198 Lv~~Il~~~d~~~~~~~~~~~~lapl~IGl~V~~~~l~~g~~TG~amNPAR~~GPal~~~~~~~w~~~WvywvgPiiGa~ 277 (304)
T 3cn5_A 198 LVYTVFSATDPKRSARDSHVPILAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNSNKVWDDQWIFWVGPFIGAA 277 (304)
T ss_dssp HHHHHHHTEEEEEESTTSCCEEECHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHCCHHHHHHTTHHHHHHHHHHH
T ss_pred HHHHHhheecCccCCCCcccccchHHHHHHHHHHHHHhccCCCccccChHHHHHHHHHHccCCCcCceEEEeehHHHHHH
Confidence 99999998887664332222348999999999999999999999999999999999996545689999999999998754
No 2
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}
Probab=100.00 E-value=1e-50 Score=350.26 Aligned_cols=210 Identities=37% Similarity=0.582 Sum_probs=179.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCccchhHHHHHHHHHHHHHHHHhcCCCCcccChHHHHHHHHhcCCC
Q 024149 51 SFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLS 130 (272)
Q Consensus 51 ~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~v~~~i~~~~~~SGah~NPavTl~~~~~g~~~ 130 (272)
+++|++++||+||++|++++++++.+.. .+.+....+++.+++++|+.++..+++++++||+|+|||||++.++.|+++
T Consensus 2 ~~~r~~~aEfiGT~~lv~~g~g~~~~~~-~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaHlNPAVTla~~~~g~~~ 80 (223)
T 3gd8_A 2 AFWKAVTAEFLAMLIFVLLSLGSTINWG-GTEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKIS 80 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCTT-TTTSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcc-cCCCCCCcchHHHHHHHHHHHHHHHheecccccceEcHHHHHHHHHcCCCC
Confidence 4789999999999999999999887542 222223457888999999999999999999999999999999999999999
Q ss_pred ccchhHHhhhhhHHHHHHHHHHHHHhccccccccCCCcccccccCCccchhhHHHHHHHHHHHHHHHhccccccCCCCCC
Q 024149 131 LTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHV 210 (272)
Q Consensus 131 ~~~~~~yi~aQ~lGa~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~E~~~T~iL~~~il~~~~~~~~~~~~~~ 210 (272)
|++++.|+++|++|+++|+.+++.+++ ++... ..+.+.+.++.+..++|+.|+++||+|+++++.+.|++++..
T Consensus 81 ~~~~~~Yi~AQ~lGA~~ga~lv~~~~~-~~~~~-~lg~~~~~~~~s~~~~~~~E~i~Tf~Lv~~i~~~~~~~~~~~---- 154 (223)
T 3gd8_A 81 IAKSVFYIAAQCLGAIIGAGILYLVTP-PSVVG-GLGVTMVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDV---- 154 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSC-HHHHT-TTTCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHTCTTCSCC----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcc-ccccc-ceeeccCCCccCHHHHHHHHHHHHHHHHHHHHHHhccccCCc----
Confidence 999999999999999999999999983 32211 223445567778889999999999999999999988776432
Q ss_pred CcchhHHHHHHHHHHHHHhcCCCcCccchhhhHHHHHHhCCCCCCCcceeEeeccccCCC
Q 024149 211 PILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHVRLIYSFHYPKI 270 (272)
Q Consensus 211 ~~~~p~~ig~~v~~~~~~~~~~tG~~lNPAR~~gp~l~~~~~~~w~~~wvy~~g~~~~~~ 270 (272)
+...|+.||+++.+....+++.||++||||||||||++.+ +|+|+||||+||.+|.+
T Consensus 155 ~~~~pl~iGl~v~~~~~~g~~~TG~a~NPAR~~GP~l~~~---~w~~~Wvy~vgP~~Ga~ 211 (223)
T 3gd8_A 155 TGSIALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG---NWENHWIYWVGPIIGAV 211 (223)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHT---CCTTTTHHHHHHHHHHH
T ss_pred cCCccHHHHHHHHHHHHhccCCccccccHHHHHHHHHHhc---CCCcEEeehhHHHHHHH
Confidence 2468999999998888888889999999999999999974 79999999999998754
No 3
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus}
Probab=100.00 E-value=5.3e-50 Score=361.17 Aligned_cols=213 Identities=37% Similarity=0.557 Sum_probs=181.4
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCccchhHHHHHHHHHHHHHHHHhcCCCCcccChHHHHHHHHhc
Q 024149 48 KSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLAR 127 (272)
Q Consensus 48 ~~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~v~~~i~~~~~~SGah~NPavTl~~~~~g 127 (272)
...+++|++++||+|||+|+|++++++.+.. ...+....+++.+++++|+++++.+++++++||||+|||||++.++.|
T Consensus 47 ~~~~l~r~~lAEflGT~lLV~~G~Gs~a~~~-~~~~~~~~g~l~Iala~GlaV~~~v~~~g~ISGAHlNPAVTlal~l~G 125 (340)
T 3iyz_A 47 WTQAFWKAVTAEFLAMLIFVLLSVGSTINWG-GSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTR 125 (340)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cCCCCCCcchHHHHHHHHHHHHHheeEeeccCcCeeChHHHHHHHHcC
Confidence 3457899999999999999999999887542 222223456788999999999999999999999999999999999999
Q ss_pred CCCccchhHHhhhhhHHHHHHHHHHHHHhccccccccCCCcccccccCCccchhhHHHHHHHHHHHHHHHhccccccCCC
Q 024149 128 KLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARD 207 (272)
Q Consensus 128 ~~~~~~~~~yi~aQ~lGa~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~E~~~T~iL~~~il~~~~~~~~~~~ 207 (272)
+++|.+++.||++|++||++|+++++.+++ +... ...+.+.+.++.+..++|+.|+++||+|+++|+++.|+++...
T Consensus 126 ~~~~~~~~~YiiAQ~lGA~~GA~lv~~~~~-~~~~-~~lg~~~~~~~~s~~~~f~~E~i~Tf~Lv~~Ila~~d~~~~~~- 202 (340)
T 3iyz_A 126 KISIAKSVFYITAQCLGAIIGAGILYLVTP-PSVV-GGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDDKRTDV- 202 (340)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhc-CceeeccCCCccCHHHHHHHHHHHHHHHHHHHHHhhcCccCCc-
Confidence 999999999999999999999999999983 3221 1123344566778899999999999999999999988776432
Q ss_pred CCCCcchhHHHHHHHHHHHHHhcCCCcCccchhhhHHHHHHhCCCCCCCcceeEeeccccCCC
Q 024149 208 SHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHVRLIYSFHYPKI 270 (272)
Q Consensus 208 ~~~~~~~p~~ig~~v~~~~~~~~~~tG~~lNPAR~~gp~l~~~~~~~w~~~wvy~~g~~~~~~ 270 (272)
..+.|+.||+++.++.+.++++||++||||||||||++.+ +|+++||||+||.+|.+
T Consensus 203 ---~~~~pl~IGl~v~i~~~~g~~~TG~amNPARdlGPal~~~---~w~~~WVywvgPiiGai 259 (340)
T 3iyz_A 203 ---TGSVALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG---NWENHWIYWVGPIIGAV 259 (340)
T ss_pred ---ccchhhHHHHHHHHHHHhccCCccccccHHHHHHHHHHcc---CCCcEeehhHHHHHHHH
Confidence 2467999999998888888899999999999999999874 79999999999998864
No 4
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=2.1e-50 Score=353.52 Aligned_cols=213 Identities=29% Similarity=0.421 Sum_probs=175.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCccchhHHHHHHHHHHHHHHHHhcCCCCcccChHHHHHHHHhcC
Q 024149 49 SWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARK 128 (272)
Q Consensus 49 ~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~v~~~i~~~~~~SGah~NPavTl~~~~~g~ 128 (272)
..+++|++++||+||++|+|++++++......+ ....+++.+++++|+.+++.+++++++||+|+|||||++.++.|+
T Consensus 26 ~~~l~r~~laEflGT~lLv~~G~G~~~~~~~~~--~~~~~~l~iala~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~ 103 (256)
T 3llq_A 26 SYVMGRKLLAEFFGTFWLVFGGCGSAVFAAAFP--ELGIGFTGVALAFGLTVLTMAYAVGGISGGHFNPAVSVGLTVAGR 103 (256)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHHTTCT--TTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC--CCCccHHHHHHHHHHHHHHHHheeeccccceEchHHHHHHHHhcC
Confidence 445789999999999999999998865332221 224568889999999999999999999999999999999999999
Q ss_pred CCccchhHHhhhhhHHHHHHHHHHHHHhcc-ccccccC---CCcccccc-cCCccchhhHHHHHHHHHHHHHHHhccccc
Q 024149 129 LSLTRALFYMVMQCLGAICGAGVVKGFMGA-GQYGRLA---GGANVVAH-GYTKGDGLGAEIIGTFVLVYTVFSATDAKR 203 (272)
Q Consensus 129 ~~~~~~~~yi~aQ~lGa~~a~~~~~~l~~~-~~~~~~~---~~~~~~~~-~~~~~~~f~~E~~~T~iL~~~il~~~~~~~ 203 (272)
++|++++.||++|++||++|+++++.+++. ..++..+ .+.....| ..+..++|+.|+++||+|+++++.+.|+++
T Consensus 104 ~~~~~~~~YiiAQ~lGA~~ga~lv~~~~~~~~~~~~~~~~~~~~~~t~p~~~s~~~~f~~E~i~Tf~Lv~~il~~~d~~~ 183 (256)
T 3llq_A 104 FPASSLVPYVIAQVAGAIVAAAALYVIATGKAGIDLGGFASNGYGEHSPGGYSLVSALLIEIILTAFFLIVILGSTHGRV 183 (256)
T ss_dssp SCGGGHHHHHHHHHHHHHHHHHHHHHHHTTBTTCCCTTTTCCCCGGGSTTCCCHHHHHHHHHHHHHHHHHHHHHHHSTTS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccccccccccccCCcccCHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 999999999999999999999999999832 2233211 11112223 457789999999999999999999888654
Q ss_pred cCCCCCCCcchhHHHHHHHHHHHHHhcCCCcCccchhhhHHHHHHhCCCCCCCcceeEeeccccCCC
Q 024149 204 SARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHVRLIYSFHYPKI 270 (272)
Q Consensus 204 ~~~~~~~~~~~p~~ig~~v~~~~~~~~~~tG~~lNPAR~~gp~l~~~~~~~w~~~wvy~~g~~~~~~ 270 (272)
. +.+.|+.||++++++.++.+++||++||||||||||++++ +..|+++||||+||.+|.+
T Consensus 184 ~------~~~~pl~IGl~v~~i~~~~g~~TG~a~NPAR~lGPal~~g-~~~~~~~WVy~vgPi~Ga~ 243 (256)
T 3llq_A 184 P------AGFAPIAIGLALTLIHLISIPVTNTSVNPARSTGQALFVG-GWALQQLWLFWLAPIVGGA 243 (256)
T ss_dssp C------TTCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHC-HHHHHHTTHHHHHHHHHHH
T ss_pred C------ccchhHHHHHHHHHHHHHhccccccccChHHHHHHHHHcC-CCcccceeeeeeHHHHHHH
Confidence 2 2478999999999999999999999999999999999984 3357799999999998754
No 5
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A
Probab=100.00 E-value=1.8e-49 Score=351.72 Aligned_cols=217 Identities=39% Similarity=0.603 Sum_probs=183.0
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHHHHhccccc----CCCCCccchhHHHHHHHHHHHHHHHHhcCCCCcccChHHH
Q 024149 45 GELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKS----NTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVT 120 (272)
Q Consensus 45 ~~~~~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~----~~~~~~~~~~~i~~~~g~~v~~~i~~~~~~SGah~NPavT 120 (272)
+|.++++++|++++||+||++|+|++++++.+.... +......+++.+++++|+.+++.+++++++||||+|||||
T Consensus 3 ~e~~~~~~~r~~~aEflGT~llv~~g~g~~~~~~~~~~~~~~~g~~~~~~~ial~~Gl~v~~~i~~~g~iSGaHlNPAVT 82 (271)
T 1j4n_A 3 SEFKKKLFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVT 82 (271)
T ss_dssp STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCCSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCcccchHHHHHHHHHHHHHHHHHHhcCCcceEcHHHH
Confidence 355667899999999999999999999988764321 1111223578899999999999999999999999999999
Q ss_pred HHHHHhcCCCccchhHHhhhhhHHHHHHHHHHHHHhccccccccCCCcccccccCCccchhhHHHHHHHHHHHHHHHhcc
Q 024149 121 LGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATD 200 (272)
Q Consensus 121 l~~~~~g~~~~~~~~~yi~aQ~lGa~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~E~~~T~iL~~~il~~~~ 200 (272)
++.++.|+++|++++.||++|++||++|+++++.+++.. .. ...+.+.+.++.+..++|+.|+++||+|+++++++.|
T Consensus 83 la~~~~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~-~~-~~~g~~~~~~~~~~~~~~~~E~i~T~~Lv~~i~~~~d 160 (271)
T 1j4n_A 83 LGLLLSCQISVLRAIMYIIAQCVGAIVATAILSGITSSL-PD-NSLGLNALAPGVNSGQGLGIEIIGTLQLVLCVLATTD 160 (271)
T ss_dssp HHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-TT-CCTTCCCCCTTCCTTGGGHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHccCC-cc-cccccccCCCccchHHHHHHHHHHHHHHHHHHHhhcc
Confidence 999999999999999999999999999999999998322 11 1223345567788899999999999999999999988
Q ss_pred ccccCCCCCCCcchhHHHHHHHHHHHHHhcCCCcCccchhhhHHHHHHhCCCCCCCcceeEeeccccCCC
Q 024149 201 AKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHVRLIYSFHYPKI 270 (272)
Q Consensus 201 ~~~~~~~~~~~~~~p~~ig~~v~~~~~~~~~~tG~~lNPAR~~gp~l~~~~~~~w~~~wvy~~g~~~~~~ 270 (272)
++++.. +.+.|+.||+++.+.++.++++||++||||||||||++.+ +|+++||||+||.+|.+
T Consensus 161 ~~~~~~----~~~~pl~IGl~v~~~~~~~~~~TG~a~NPAR~~Gpal~~~---~~~~~wv~~vgP~~Ga~ 223 (271)
T 1j4n_A 161 RRRRDL----GGSGPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVITH---NFQDHWIFWVGPFIGAA 223 (271)
T ss_dssp SSCCCC----CSCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHTT---CCTTTTHHHHHHHHHHH
T ss_pred ccCCCc----cccHHHHHHHHHHHHHHhccCCCccccChHHHHHHHHHhC---CCcceeHHHHHHHHHHH
Confidence 765432 3479999999999888888889999999999999999873 89999999999998754
No 6
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A
Probab=100.00 E-value=2.2e-49 Score=354.22 Aligned_cols=215 Identities=37% Similarity=0.556 Sum_probs=181.4
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCccchhHHHHHHHHHHHHHHHHhcCCCCcccChHHHHHHHH
Q 024149 46 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFL 125 (272)
Q Consensus 46 ~~~~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~v~~~i~~~~~~SGah~NPavTl~~~~ 125 (272)
+..+.+++|++++||+|||+|+|++++++.+.... .+....+++.+++++|+.+++.+++++++||||+|||||++.++
T Consensus 6 ~~~~~~~~r~~lAEflGT~lLv~~g~Gs~~~~~~~-~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~~ 84 (301)
T 2zz9_A 6 GVWTQAFWKAVTAEFLAMLIFVLLSVGSTINWGGS-ENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVC 84 (301)
T ss_dssp --CCHHHHHHHHHHHHHHHHHHHHHHTTSCCTTCC--CCCCCCHHHHHHHHHHHHHHHHHHHGGGTCCCCSHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHHhccccC-CCCCCcchHHHHHHHHHHHHHhhheeccCCcceeChHHHHHHHH
Confidence 34456789999999999999999999877654321 12234567889999999999999999999999999999999999
Q ss_pred hcCCCccchhHHhhhhhHHHHHHHHHHHHHhccccccccCCCcccccccCCccchhhHHHHHHHHHHHHHHHhccccccC
Q 024149 126 ARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSA 205 (272)
Q Consensus 126 ~g~~~~~~~~~yi~aQ~lGa~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~E~~~T~iL~~~il~~~~~~~~~ 205 (272)
.|+++|++++.||++|++||++|+++++.+++++ .. ...+.+.+.++.+..++|+.|+++||+|+++++++.|++++.
T Consensus 85 ~g~~~~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~-~~-~~~g~~~~~~~~s~~~~f~~E~i~Tf~Lv~~Il~~~d~~~~~ 162 (301)
T 2zz9_A 85 TRKISIAKSVFYITAQCLGAIIGAGILYLVTPPS-VV-GGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDDKRTD 162 (301)
T ss_dssp TSSSCTTTTHHHHHHHHHHHHHHHHHHHTTSCSC-GG-GTSSCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHSCSSSSC
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcccc-cc-CceeeecCCcccchHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 9999999999999999999999999999998432 22 122334455677888999999999999999999988876643
Q ss_pred CCCCCCcchhHHHHHHHHHHHHHhcCCCcCccchhhhHHHHHHhCCCCCCCcceeEeeccccCCC
Q 024149 206 RDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHVRLIYSFHYPKI 270 (272)
Q Consensus 206 ~~~~~~~~~p~~ig~~v~~~~~~~~~~tG~~lNPAR~~gp~l~~~~~~~w~~~wvy~~g~~~~~~ 270 (272)
. +.+.|+.||+++.+..+.++++||++||||||||||++.+ +|+++||||+||.+|.+
T Consensus 163 ~----~~~~pl~IGl~v~i~~~~g~~~TG~a~NPAR~~GPal~~~---~w~~~WVy~vgPiiGai 220 (301)
T 2zz9_A 163 V----TGSVALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG---NWENHWIYWVGPIIGAV 220 (301)
T ss_dssp C----SSCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC---CCTTTTHHHHHHHHHHH
T ss_pred c----cchHhHHHHHHHHHHHHHhcCCcccccCcHHHHHHHHHhC---CCcceeeeeeHHHHHHH
Confidence 2 3478999999998888888899999999999999999974 79999999999998754
No 7
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A*
Probab=100.00 E-value=1.6e-48 Score=344.22 Aligned_cols=211 Identities=32% Similarity=0.464 Sum_probs=180.9
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCccchhHHHHHHHHHHHHHHHHhcCCCCcccChHHHHHHHH
Q 024149 46 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFL 125 (272)
Q Consensus 46 ~~~~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~v~~~i~~~~~~SGah~NPavTl~~~~ 125 (272)
|.++.+++|++++||+|||+|+|+++++.... . ....+++.+++++|+.+++.+++++++||+|+|||||+++++
T Consensus 3 e~~~~~~~~~~laEfiGT~~Lv~~g~g~~~~~--~---~~~~~~l~i~l~~Gl~v~~~i~~~g~iSGahlNPAVTla~~~ 77 (263)
T 2b6o_A 3 ELRSASFWRAIFAEFFATLFYVFFGLGASLRW--A---PGPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLV 77 (263)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHHSCC--C---SSSCHHHHHHHHHHHHHHHHHHHGGGTTCCCCSHHHHHHHHH
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHhcC--C---CCCcchHHHHHHHHHHHHHHHHHhhccCcCeeChHHHHHHHH
Confidence 45667889999999999999999998877532 1 122356788999999999999999999999999999999999
Q ss_pred hcCCCccchhHHhhhhhHHHHHHHHHHHHHhccccccccCCCcccccccCCccchhhHHHHHHHHHHHHHHHhccccccC
Q 024149 126 ARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSA 205 (272)
Q Consensus 126 ~g~~~~~~~~~yi~aQ~lGa~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~E~~~T~iL~~~il~~~~~~~~~ 205 (272)
.|+++|.++++|+++|++|+++|+.+++.++++ .... ..+.+.+.++.+..++|+.|+++||+|+++++.+.|++++.
T Consensus 78 ~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~-~~~~-~~~~~~~~~~~s~~~~~~~E~i~Tf~Lv~~il~~~d~~~~~ 155 (263)
T 2b6o_A 78 GSQMSLLRAICYVVAQLLGAVAGAAVLYSVTPP-AVRG-NLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNG 155 (263)
T ss_dssp TTCSCHHHHHHHHHHHHHHHHHHHHHHHHHSCT-TTCS-SCSCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTSCS
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHccc-cccc-ccccccCCccccHHHHHHHHHHHHHHHHHHHHHHhcccCCC
Confidence 999999999999999999999999999999943 2221 22344556778889999999999999999999998866543
Q ss_pred CCCCCCcchhHHHHHHHHHHHHHhcCCCcCccchhhhHHHHHHhCCCCCCCcceeEeeccccCCC
Q 024149 206 RDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHVRLIYSFHYPKI 270 (272)
Q Consensus 206 ~~~~~~~~~p~~ig~~v~~~~~~~~~~tG~~lNPAR~~gp~l~~~~~~~w~~~wvy~~g~~~~~~ 270 (272)
. +.+.|+.||+++++++++++++||++||||||||||++.+ +|+|+||||+||.+|.+
T Consensus 156 ~----~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~---~~~~~Wvy~vgP~~Ga~ 213 (263)
T 2b6o_A 156 R----LGSVALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTR---NFTNHWVYWVGPVIGAG 213 (263)
T ss_dssp S----CCCHHHHHHHHHHHHHHHHTTTSTTCCCHHHHHHHHHHHT---CCTTCTHHHHHHHHHHH
T ss_pred C----cccHHHHHHHHHHHHHHhccCCCcccccHHHHHHHHHHcC---CccceeHHHHHHHHHHH
Confidence 2 3478999999999999999999999999999999999974 89999999999998754
No 8
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*
Probab=100.00 E-value=3.5e-48 Score=344.11 Aligned_cols=209 Identities=30% Similarity=0.410 Sum_probs=175.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhc--cccc--CCCCCccchhHHHHHHHHHHHHHHHHhcCCCCcccChHHHHHHHH
Q 024149 50 WSFYRAGIAEFIATFLFLYISVLTVMG--VVKS--NTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFL 125 (272)
Q Consensus 50 ~~~~~~~~aE~igT~~lv~~~~~~~~~--~~~~--~~~~~~~~~~~i~~~~g~~v~~~i~~~~~~SGah~NPavTl~~~~ 125 (272)
++.+|++++||+||++|+|++++++.. .... +......+++.+++++|+.+++.+++++++||||+|||||++.++
T Consensus 42 ~~~~r~~laEfiGT~~Lv~~g~g~~~~~~~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~~ 121 (279)
T 2w2e_A 42 RNHFIAMSGEFVGTFLFLWSAFVIAQIANQAPETPDGGSNPAQLIMISFGFGFGVMVGVFITYRVSGGNLNPAVTLALVL 121 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCGGGCCCHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCccHHHHHHHHHHHHHHHHHHHhhcCccccChHHHHHHHH
Confidence 467899999999999999999876421 1111 111223457789999999999999999999999999999999999
Q ss_pred hcCCCccchhHHhhhhhHHHHHHHHHHHHHhccccccccCCCcccccccCCccchhhHHHHHHHHHHHHHHHhccccccC
Q 024149 126 ARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSA 205 (272)
Q Consensus 126 ~g~~~~~~~~~yi~aQ~lGa~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~E~~~T~iL~~~il~~~~~~~~~ 205 (272)
.|+++|++++.|+++|++||++|+++++.+++.+ .. ..+.+.++.+..++|+.|+++||+|+++++.+.+++++.
T Consensus 122 ~g~~~~~~~~~YiiAQ~lGA~~ga~lv~~~~~~~-~~----~~t~~~~~~s~~~~~~~E~i~Tf~Lv~~Il~~~~~~~~~ 196 (279)
T 2w2e_A 122 ARAIPPFRGILMAFTQIVAGMAAAGAASAMTPGE-IA----FANALGGGASRTRGLFLEAFGTAILCLTVLMLAVEKHRA 196 (279)
T ss_dssp TTSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCSS-CC----CSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCSTT
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcccc-ce----eeccCCccccHHHHHHHHHHHHHHHHHHHHHHccCCCCC
Confidence 9999999999999999999999999999998332 21 123344467778999999999999999999987665532
Q ss_pred CCCCCCcchhHHHHHHHHHHHHHhcCCCcCccchhhhHHHHHHhCCCCCCCcceeEeeccccCCC
Q 024149 206 RDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHVRLIYSFHYPKI 270 (272)
Q Consensus 206 ~~~~~~~~~p~~ig~~v~~~~~~~~~~tG~~lNPAR~~gp~l~~~~~~~w~~~wvy~~g~~~~~~ 270 (272)
+.+.|+.||+++++++++++++||++||||||||||++++ ..|+|+||||+||.+|.+
T Consensus 197 -----~~~~pl~IGl~v~~~~l~~g~~TG~s~NPAR~~GPal~~~--~~~~~~WVy~vgPiiGa~ 254 (279)
T 2w2e_A 197 -----TWFAPFVIGIALLIAHLICIYYTGAGLNPARSFGPAVAAR--SFPNYHWIYWLGPILGAF 254 (279)
T ss_dssp -----GGGHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHHT--CCCTTTTHHHHHHHHHHH
T ss_pred -----cCcHHHHHHHHHHHHHHhcccccccccChHHHHHHHHHhc--cchhhhhHHHHHHHHHHH
Confidence 3479999999999999999999999999999999999984 356799999999998754
No 9
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens}
Probab=100.00 E-value=9.5e-49 Score=345.77 Aligned_cols=211 Identities=35% Similarity=0.518 Sum_probs=180.2
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCccchhHHHHHHHHHHHHHHHHhcCCCCcccChHHHHHHHH
Q 024149 46 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFL 125 (272)
Q Consensus 46 ~~~~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~v~~~i~~~~~~SGah~NPavTl~~~~ 125 (272)
|.++++++|++++||+||++|+|++++++... .+ ...+++.+++++|+.+++.+++++++||+|+|||||++.++
T Consensus 5 e~~~~~~~r~~laEfiGT~~lv~~g~g~~~~~--~~---~~~~~l~ial~~Glav~~~i~~~g~iSGaHlNPAVTla~~~ 79 (266)
T 3d9s_A 5 EVCSVAFLKAVFAEFLATLIFVFFGLGSALKW--PS---ALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLV 79 (266)
T ss_dssp HHTSHHHHHHHHHHHHHHHHHHHHHHHHHSCC--SS---SCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
T ss_pred hhhChHHHHHHHHHHHHHHHHHHHHHHHHhCC--CC---CCccHHHHHHHHHHHHHHHHHHHcccCcceECHHHHHHHHH
Confidence 34566789999999999999999999887531 11 12467889999999999999999999999999999999999
Q ss_pred hcCCCccchhHHhhhhhHHHHHHHHHHHHHhccccccccCCCcccccccCCccchhhHHHHHHHHHHHHHHHhccccccC
Q 024149 126 ARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSA 205 (272)
Q Consensus 126 ~g~~~~~~~~~yi~aQ~lGa~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~E~~~T~iL~~~il~~~~~~~~~ 205 (272)
.|+++|++++.|+++|++||++|+.+++.+++. ... ...+.+.+.++.+..++|+.|+++||+|+++++.+.|++++.
T Consensus 80 ~g~~~~~~~~~Yi~AQ~lGA~~ga~l~~~~~~~-~~~-~~~g~~~~~~~~s~~~~~~~E~i~Tf~Lv~~il~~~d~~~~~ 157 (266)
T 3d9s_A 80 GNQISLLRAFFYVAAQLVGAIAGAGILYGVAPL-NAR-GNLAVNALNNNTTQGQAMVVELILTFQLALCIFASTDSRRTS 157 (266)
T ss_dssp TSSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCH-HHH-TTTTCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHHCTTCCS
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHccc-ccc-CceeeccCCccccHHHHHHHHHHHHHHHHHHHHHHhcccCCC
Confidence 999999999999999999999999999999933 221 122334445667888999999999999999999998876643
Q ss_pred CCCCCCcchhHHHHHHHHHHHHHhcCCCcCccchhhhHHHHHHhCCCCCCCc-ceeEeeccccCCC
Q 024149 206 RDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDD-HVRLIYSFHYPKI 270 (272)
Q Consensus 206 ~~~~~~~~~p~~ig~~v~~~~~~~~~~tG~~lNPAR~~gp~l~~~~~~~w~~-~wvy~~g~~~~~~ 270 (272)
. +.+.|+.||+++.++++.++++||++||||||||||++.+ +|++ +||||+||.+|.+
T Consensus 158 ~----~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~---~~~~~~Wvy~vgP~~Ga~ 216 (266)
T 3d9s_A 158 P----VGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMN---RFSPAHWVFWVGPIVGAV 216 (266)
T ss_dssp C----CCCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHT---CCCTTHHHHHHHHHHHHH
T ss_pred c----cchHHHHHHHHHHHHHHHhhccccccccHHHHHHHHHHcC---CcccCEeeeehHHHHHHH
Confidence 2 2478999999999999999999999999999999999974 8998 9999999998754
No 10
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*
Probab=100.00 E-value=1e-48 Score=340.31 Aligned_cols=210 Identities=27% Similarity=0.400 Sum_probs=174.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCccchhHHHHHHHHHHHHHHHHhcCCCCcccChHHHHHHHHhcCCCc
Q 024149 52 FYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSL 131 (272)
Q Consensus 52 ~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~v~~~i~~~~~~SGah~NPavTl~~~~~g~~~~ 131 (272)
++|++++||+||++|+|++++++...... +....+++.+++++|+.+++.+++++++||+|+|||||++.++.|+++|
T Consensus 4 l~r~~~aEf~GT~~lv~~g~g~~~~~~~~--~~~~~~~l~ia~~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~ 81 (234)
T 2o9g_A 4 MFRKLAAESFGTFWLVFGGSGSAVLAAGF--PELGIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFPA 81 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTTC--TTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccCC--CCCCcChHHHHHHHHHHHHHHHHHhhccCcceeCHHHHHHHHHhCCCCH
Confidence 68999999999999999998876432211 1123467889999999999999999999999999999999999999999
Q ss_pred cchhHHhhhhhHHHHHHHHHHHHHhccc-ccccc-----CCCcccccc-cCCccchhhHHHHHHHHHHHHHHHhcccccc
Q 024149 132 TRALFYMVMQCLGAICGAGVVKGFMGAG-QYGRL-----AGGANVVAH-GYTKGDGLGAEIIGTFVLVYTVFSATDAKRS 204 (272)
Q Consensus 132 ~~~~~yi~aQ~lGa~~a~~~~~~l~~~~-~~~~~-----~~~~~~~~~-~~~~~~~f~~E~~~T~iL~~~il~~~~~~~~ 204 (272)
++++.|+++|++|+++|+.+++.++++. +++.. ..+.....| +.+..++|+.|+++||+|+++++.+.|+++.
T Consensus 82 ~~~~~Yi~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~t~p~~~~~~~~~~~E~i~T~~Lv~~i~~~~d~~~~ 161 (234)
T 2o9g_A 82 KEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHGATDKFAP 161 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCHHHHCTTCCCCGGGSTTCCCHHHHHHHHHHHHHHHHHHHHHHTSTTSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccccceeeecCCCccchHHHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 9999999999999999999999998432 23221 111122223 4677899999999999999999999875432
Q ss_pred CCCCCCCcchhHHHHHHHHHHHHHhcCCCcCccchhhhHHHHHHhCCCCCCCcceeEeeccccCCC
Q 024149 205 ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHVRLIYSFHYPKI 270 (272)
Q Consensus 205 ~~~~~~~~~~p~~ig~~v~~~~~~~~~~tG~~lNPAR~~gp~l~~~~~~~w~~~wvy~~g~~~~~~ 270 (272)
+.+.|+.||+++.+++++.+++||++||||||||||++++ +.+|+|+||||+||.+|.+
T Consensus 162 ------~~~~pl~IGl~v~~~~~~~g~~TG~s~NPAR~lGPal~~g-~~~~~~~Wv~~vgP~~Ga~ 220 (234)
T 2o9g_A 162 ------AGFAPIAIGLACTLIHLISIPVTNTSVNPARSTAVAIFQG-GWALEQLWFFWVVPIVGGI 220 (234)
T ss_dssp ------TTCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHC-SHHHHSHHHHHHHHHHHHH
T ss_pred ------cchHHHHHHHHHHHHHHHccCCCccccChHHHHHHHHHhC-CCCCceeeeeehHHhHHHH
Confidence 2479999999999999999999999999999999999984 3457799999999998754
No 11
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*
Probab=100.00 E-value=1.2e-47 Score=336.23 Aligned_cols=215 Identities=27% Similarity=0.368 Sum_probs=177.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccc-ccCC--------CC-----CccchhHHHHHHHHHHHHHHHHhcCCCCcccC
Q 024149 51 SFYRAGIAEFIATFLFLYISVLTVMGVV-KSNT--------KC-----STVGIQGIAWAFGGMIFVLVYCTAGISGGHIN 116 (272)
Q Consensus 51 ~~~~~~~aE~igT~~lv~~~~~~~~~~~-~~~~--------~~-----~~~~~~~i~~~~g~~v~~~i~~~~~~SGah~N 116 (272)
+++|++++||+||++|+|++++++.+.. .+++ .. ...+++.+++++|+.+++.+++++++||+|+|
T Consensus 3 ~~~~~~~aEfiGT~~lv~~g~g~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaH~N 82 (246)
T 2f2b_A 3 SLTKRCIAEFIGTFILVFFGAGSAAVTLMIASGGTSPNPFNIGIGLLGGLGDWVAIGLAFGFAIAASIYALGNISGCHIN 82 (246)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSTTCCSTTTTTTHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCccccccccccccccccccchhHHHHHHHHHHHHHhheecccccceeC
Confidence 4689999999999999999998776543 1111 01 12235668999999999999999999999999
Q ss_pred hHHHHHHHHhcCCCccchhHHhhhhhHHHHHHHHHHHHHhccccccccCCCcccccccCCccchhhHHHHHHHHHHHHHH
Q 024149 117 PAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF 196 (272)
Q Consensus 117 PavTl~~~~~g~~~~~~~~~yi~aQ~lGa~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~E~~~T~iL~~~il 196 (272)
||||++.++.|+++|++++.|+++|++|+++|+.+++.+++++.......+.+.+.++.+..++++.|+++||+|+++++
T Consensus 83 PAVTla~~~~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~t~p~~~~~~~~~~~~E~i~Tf~Lv~~i~ 162 (246)
T 2f2b_A 83 PAVTIGLWSVKKFPGREVVPYIIAQLLGAAFGSFIFLQCAGIGAATVGGLGATAPFPGISYWQAMLAEVVGTFLLMITIM 162 (246)
T ss_dssp HHHHHHHHHTTSSCGGGHHHHHHHHHHHHHHHHHHHHHHHCTHHHHTTGGGCCCCCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhcceeeeccCccccchHHHHHHHHHHHHHHHheee
Confidence 99999999999999999999999999999999999999995432221112223333567788999999999999999999
Q ss_pred HhccccccCCCCCCCcchhHHHHHHHHHHHHHhcCCCcCccchhhhHHHHH--Hh-CCCCCCCcceeEeeccccCCC
Q 024149 197 SATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAI--IY-NKDRGWDDHVRLIYSFHYPKI 270 (272)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~p~~ig~~v~~~~~~~~~~tG~~lNPAR~~gp~l--~~-~~~~~w~~~wvy~~g~~~~~~ 270 (272)
.+.+++++. +.+.|+.+|+++.+.+++.+++||+++|||||||||+ .. +++.+|+|.|+||+||.+|.+
T Consensus 163 ~~~~~~~~~-----~~~~pl~iGl~v~~~~~~~g~~TG~~iNPAr~lgp~l~~~~~g~~~~w~~~~vy~vap~~Ga~ 234 (246)
T 2f2b_A 163 GIAVDERAP-----KGFAGIIIGLTVAGIITTLGNISGSSLNPARTFGPYLNDMIFAGTDLWNYYSIYVIGPIVGAV 234 (246)
T ss_dssp HHTTSTTSC-----TTCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCGGGTTHHHHHHHHHHH
T ss_pred EEecCCCCC-----CceeeHHHHHHHHHHHhcccccCCCccCHHHHHHHHHHHHHcCCCCCcceEEEeeeHHHHHHH
Confidence 876654432 2478999999999999999999999999999999999 33 456799999999999998764
No 12
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*
Probab=100.00 E-value=4.8e-48 Score=344.49 Aligned_cols=214 Identities=26% Similarity=0.372 Sum_probs=175.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCccchhHHHHHHHHHHHHHHHHhcCCCCcccChHHHHHHHHhcCC
Q 024149 50 WSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKL 129 (272)
Q Consensus 50 ~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~v~~~i~~~~~~SGah~NPavTl~~~~~g~~ 129 (272)
.+++|++++||+|||+|+|++++++.+...++. ..+...+++++|+.+++.+++++++||+|+|||||++.++.|++
T Consensus 5 ~~~~~~~laEflGT~~Lv~~G~g~~~~~~l~~~---~~g~~~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~ 81 (281)
T 1ldf_A 5 STLKGQCIAEFLGTGLLIFFGVGCVAALKVAGA---SFGQWEISVIFGLGVAMAIYLTAGVSGAHLNPAVTIALWLFACF 81 (281)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCC---CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC---CCchHHHHHHHHHHHHHHhheecccCcCeeChHHHHHHHHcCCC
Confidence 357899999999999999999988765443321 22445589999999999999999999999999999999999999
Q ss_pred CccchhHHhhhhhHHHHHHHHHHHHHhccccccccC-----------------CCcccccccCCccchhhHHHHHHHHHH
Q 024149 130 SLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLA-----------------GGANVVAHGYTKGDGLGAEIIGTFVLV 192 (272)
Q Consensus 130 ~~~~~~~yi~aQ~lGa~~a~~~~~~l~~~~~~~~~~-----------------~~~~~~~~~~~~~~~f~~E~~~T~iL~ 192 (272)
+|++++.|+++|++||++|+++++.+++ +.++..+ ...+.+.++.+..++|+.|+++||+|+
T Consensus 82 ~~~~~~~Yi~AQ~lGA~~ga~l~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~f~t~p~~~~s~~~~~~~E~i~Tf~Lv 160 (281)
T 1ldf_A 82 DKRKVIPFIVSQVAGAFCAAALVYGLYY-NLFFDFEQTHHIVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVITAILM 160 (281)
T ss_dssp CTTTHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHTTCCTTSGGGHHHHTTTSCCCCTTCCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhh-hhhhhccccccccccccccccccceeeccCCccccHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999983 3221110 011223345678899999999999999
Q ss_pred HHHHHhccccccCCCCCCCcchhHHHHHHHHHHHHHhcCCCcCccchhhhHHHHHHhC----CC------CCCCcceeEe
Q 024149 193 YTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYN----KD------RGWDDHVRLI 262 (272)
Q Consensus 193 ~~il~~~~~~~~~~~~~~~~~~p~~ig~~v~~~~~~~~~~tG~~lNPAR~~gp~l~~~----~~------~~w~~~wvy~ 262 (272)
++++.+.|++++... +.+.|+.||+++++++++.+++||++||||||||||+++. +. .+|.|+||||
T Consensus 161 ~~il~~~d~~~~~~~---~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~g~g~~~~~~~~~~~~~WVy~ 237 (281)
T 1ldf_A 161 GLILALTDDGNGVPR---GPLAPLLIGLLIAVIGASMGPLTGTAMNPARDFGPKVFAWLAGWGNVAFTGGRDIPYFLVPL 237 (281)
T ss_dssp HHHHHHHCTTSSSCC---GGGHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHTTTTTHHHHTTCSSCTTHHHH
T ss_pred HHHHHHhccCCCCcc---cchHHHHHHHHHHHHHHhcccccccccCcHhhHHHHHHHHhcccccccccccCCCceeeHHh
Confidence 999999887664311 2489999999999999999999999999999999999872 11 2334899999
Q ss_pred eccccCCC
Q 024149 263 YSFHYPKI 270 (272)
Q Consensus 263 ~g~~~~~~ 270 (272)
+||.+|.+
T Consensus 238 vgPi~Ga~ 245 (281)
T 1ldf_A 238 FGPIVGAI 245 (281)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998754
No 13
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}
Probab=100.00 E-value=6.8e-48 Score=339.63 Aligned_cols=214 Identities=21% Similarity=0.276 Sum_probs=174.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCccchhHHHHHHHHHHHHHHHHhcCCCCcccChHHHHHHHHhcCC
Q 024149 50 WSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKL 129 (272)
Q Consensus 50 ~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~v~~~i~~~~~~SGah~NPavTl~~~~~g~~ 129 (272)
++++|++++||+||++|+|++++++.+....+. ..+++.+++++|+.+++.+++++++||+|+|||||++.++.|++
T Consensus 7 ~~~~~~~~aEflGT~~lv~~G~g~~~~~~~~~~---~~~~l~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~ 83 (258)
T 3c02_A 7 KSYVREFIGEFLGTFVLMFLGEGATANFHTTGL---SGDWYKLCLGWGLAVFFGILVSAKLSGAHLNLAVSIGLSSINKF 83 (258)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSS---TTCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCC---CccHHHHHHHHHHHHHHHHheecccCcCeeChHHHHHHHHhCCC
Confidence 357899999999999999999987765432221 34678899999999999999999999999999999999999999
Q ss_pred CccchhHHhhhhhHHHHHHHHHHHHHhccccccccCC----CcccccccCCccchhhHHHHHHHHHHHHHHHhccccccC
Q 024149 130 SLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAG----GANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSA 205 (272)
Q Consensus 130 ~~~~~~~yi~aQ~lGa~~a~~~~~~l~~~~~~~~~~~----~~~~~~~~~~~~~~f~~E~~~T~iL~~~il~~~~~~~~~ 205 (272)
+|++++.|+++|++||++|+.+++.++ ++.++.... +........+..++|+.|+++||+|+++++.+.|++|+.
T Consensus 84 ~~~~~~~Yi~AQ~lGa~~ga~l~~~~~-~~~~~~~~~~~~~~~~~~~~t~p~~~~~~~E~i~Tf~Lv~~i~~~~d~~~~~ 162 (258)
T 3c02_A 84 DLKKIPVYFFAQLLGAFVGTSTVYGLY-HGFISNSKIPQFAWETSRNPSISLTGAFFNELILTGILLLVILVVVDENICG 162 (258)
T ss_dssp CGGGHHHHHHHHHHHHHHHHHHHHHHT-HHHHHTTCSCTTCSSCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHHCHHHHC
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHc-chhhhhccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHHHhCcccCC
Confidence 999999999999999999999999998 433332211 111111223344699999999999999999998876542
Q ss_pred CCCCCCcch-hHHHHHHHHHHHHHhcCCCcCccchhhhHHHHHHhC---CCCCC----CcceeEeeccccCCC
Q 024149 206 RDSHVPILA-PLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYN---KDRGW----DDHVRLIYSFHYPKI 270 (272)
Q Consensus 206 ~~~~~~~~~-p~~ig~~v~~~~~~~~~~tG~~lNPAR~~gp~l~~~---~~~~w----~~~wvy~~g~~~~~~ 270 (272)
.. +.+. |+.||+++++++++.+++||++||||||||||+++. ++..| +|+||||+||.+|.+
T Consensus 163 ~~---~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~~g~~~~~~~~~y~Wv~~vgP~~Ga~ 232 (258)
T 3c02_A 163 KF---HILKLSSVVGLIILCIGITFGGNTGFALNPSRDLGSRFLSLIAYGKDTFTKDNFYFWVPLVAPCVGSV 232 (258)
T ss_dssp SC---CHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCTHHHHHHHHTTHHHHHHHHHHHH
T ss_pred cc---cccHHHHHHHHHHHHHHHhccCccCCCcChHHHHHHHHHHhccccccccccCCceeehHHHHHHHHHH
Confidence 11 3478 999999999999999999999999999999999973 22345 679999999998754
No 14
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*
Probab=99.81 E-value=3.7e-20 Score=161.70 Aligned_cols=135 Identities=19% Similarity=0.178 Sum_probs=103.5
Q ss_pred CchhhhhhhhhhhhhccccccCCCC---CCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCccchh
Q 024149 14 KFAERQPIGTAAQTQDGKDYVEPPP---APLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQ 90 (272)
Q Consensus 14 ~Y~~aQ~~Ga~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~ 90 (272)
.|+.+|++|+++++..++...+++. .....+......+.++.++.|+++|++|++.+++.....+. . . .
T Consensus 102 ~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~t~p~~~~~~~~~~~~E~i~Tf~Lv~~i~~~~~~~~~--~--~----~ 173 (246)
T 2f2b_A 102 PYIIAQLLGAAFGSFIFLQCAGIGAATVGGLGATAPFPGISYWQAMLAEVVGTFLLMITIMGIAVDERA--P--K----G 173 (246)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCTHHHHTTGGGCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHTTSTTS--C--T----T
T ss_pred HHHHHHHHHHHHHHHHHHHHcCccchhcceeeeccCccccchHHHHHHHHHHHHHHHheeeEEecCCCC--C--C----c
Confidence 5999999999999988766554311 11111111123457899999999999999998765432111 1 1 1
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCcccChHHHHHHHH-----hcCCCccchhHHhhhhhHHHHHHHHHHHHHh
Q 024149 91 GIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFL-----ARKLSLTRALFYMVMQCLGAICGAGVVKGFM 156 (272)
Q Consensus 91 ~i~~~~g~~v~~~i~~~~~~SGah~NPavTl~~~~-----~g~~~~~~~~~yi~aQ~lGa~~a~~~~~~l~ 156 (272)
..++.+|+.++..+++.+++||+|+|||||+++++ .++..|.+.|+||++|++|+++|+++++.++
T Consensus 174 ~~pl~iGl~v~~~~~~~g~~TG~~iNPAr~lgp~l~~~~~g~~~~w~~~~vy~vap~~Ga~laa~~y~~l~ 244 (246)
T 2f2b_A 174 FAGIIIGLTVAGIITTLGNISGSSLNPARTFGPYLNDMIFAGTDLWNYYSIYVIGPIVGAVLAALTYQYLT 244 (246)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCGGGTTHHHHHHHHHHHHHHHHHHHHT
T ss_pred eeeHHHHHHHHHHHhcccccCCCccCHHHHHHHHHHHHHcCCCCCcceEEEeeeHHHHHHHHHHHHHHHHc
Confidence 24789999999999999999999999999999999 3456788899999999999999999998876
No 15
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A*
Probab=99.73 E-value=2.6e-17 Score=144.81 Aligned_cols=136 Identities=20% Similarity=0.154 Sum_probs=103.5
Q ss_pred CchhhhhhhhhhhhhccccccCCCCCCCCCCCCC-chhHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCccchhHH
Q 024149 14 KFAERQPIGTAAQTQDGKDYVEPPPAPLFEPGEL-KSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGI 92 (272)
Q Consensus 14 ~Y~~aQ~~Ga~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~i 92 (272)
.|+.+|++|+++++...+...++......+.... ...+..+.++.|+++||+|++.+++.. ..+++ ... + ..
T Consensus 88 ~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~i~Tf~Lv~~il~~~--d~~~~-~~~--~--~~ 160 (263)
T 2b6o_A 88 CYVVAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATY--DERRN-GRL--G--SV 160 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCTTTCSSCSCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHS--CTTSC-SSC--C--CH
T ss_pred HHHHHHHHHHHHHHHHHHHHcccccccccccccCCccccHHHHHHHHHHHHHHHHHHHHHHh--cccCC-CCc--c--cH
Confidence 4999999999999987766654332211111111 123568899999999999999887542 11111 111 1 23
Q ss_pred HHHHHHHHHHHHHHhcCCCCcccChHHHHHHHHhcCCCccchhHHhhhhhHHHHHHHHHHHHHhc
Q 024149 93 AWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMG 157 (272)
Q Consensus 93 ~~~~g~~v~~~i~~~~~~SGah~NPavTl~~~~~g~~~~~~~~~yi~aQ~lGa~~a~~~~~~l~~ 157 (272)
++.+|+.++...+..++.||+.+|||+++++.+... .|.+.|+||++|++|+++|+++++.++.
T Consensus 161 pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~-~~~~~Wvy~vgP~~Ga~la~~~y~~l~~ 224 (263)
T 2b6o_A 161 ALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTR-NFTNHWVYWVGPVIGAGLGSLLYDFLLF 224 (263)
T ss_dssp HHHHHHHHHHHHHHHTTTSTTCCCHHHHHHHHHHHT-CCTTCTHHHHHHHHHHHHHHHHHHTTTS
T ss_pred HHHHHHHHHHHHHhccCCCcccccHHHHHHHHHHcC-CccceeHHHHHHHHHHHHHHHHHHHHhC
Confidence 678899999999999999999999999999999766 7899999999999999999999998873
No 16
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*
Probab=99.73 E-value=9e-18 Score=145.49 Aligned_cols=135 Identities=13% Similarity=0.128 Sum_probs=101.7
Q ss_pred CchhhhhhhhhhhhhccccccCCCC----------CCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCC
Q 024149 14 KFAERQPIGTAAQTQDGKDYVEPPP----------APLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTK 83 (272)
Q Consensus 14 ~Y~~aQ~~Ga~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~ 83 (272)
.|+.+|++|+++++..++...++.. ............+..+.++.|+++|++|++.+++... ++.
T Consensus 86 ~Yi~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~t~p~~~~~~~~~~~E~i~T~~Lv~~i~~~~d--~~~--- 160 (234)
T 2o9g_A 86 GYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHGATD--KFA--- 160 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSTTCCHHHHCTTCCCCGGGSTTCCCHHHHHHHHHHHHHHHHHHHHHHTS--TTS---
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCcccccccccccccceeeecCCCccchHHHHHHHHHHHHHHHHHHHHhcC--CCC---
Confidence 5999999999999987654443211 0001111111335789999999999999998875431 111
Q ss_pred CCccchhHHHHHHHHHHHHHHHHhcCCCCcccChHHHHHHHHhc-CCCccchhHHhhhhhHHHHHHHHHHHHHhc
Q 024149 84 CSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLAR-KLSLTRALFYMVMQCLGAICGAGVVKGFMG 157 (272)
Q Consensus 84 ~~~~~~~~i~~~~g~~v~~~i~~~~~~SGah~NPavTl~~~~~g-~~~~~~~~~yi~aQ~lGa~~a~~~~~~l~~ 157 (272)
... ..++.+|+.++...+..++.||+.+||||++++.+.. +.+|.+.|+||++|++|+++|+++++.++.
T Consensus 161 ~~~----~~pl~IGl~v~~~~~~~g~~TG~s~NPAR~lGPal~~g~~~~~~~Wv~~vgP~~Ga~la~~~y~~~~~ 231 (234)
T 2o9g_A 161 PAG----FAPIAIGLACTLIHLISIPVTNTSVNPARSTAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLLE 231 (234)
T ss_dssp CTT----CHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHCSHHHHSHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred ccc----hHHHHHHHHHHHHHHHccCCCccccChHHHHHHHHHhCCCCCceeeeeehHHhHHHHHHHHHHHHHcC
Confidence 111 2478899999999999999999999999999999964 446779999999999999999999998873
No 17
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*
Probab=99.72 E-value=1.8e-17 Score=146.89 Aligned_cols=133 Identities=14% Similarity=0.061 Sum_probs=102.8
Q ss_pred CchhhhhhhhhhhhhccccccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCccchhHHH
Q 024149 14 KFAERQPIGTAAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIA 93 (272)
Q Consensus 14 ~Y~~aQ~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~i~ 93 (272)
.|+.+|++|+++|+.+++...++.... .+......+..+.++.|+++||+|++.+++..... .. . ....+
T Consensus 132 ~YiiAQ~lGA~~ga~lv~~~~~~~~~~--~t~~~~~~s~~~~~~~E~i~Tf~Lv~~Il~~~~~~--~~--~----~~~~p 201 (279)
T 2w2e_A 132 LMAFTQIVAGMAAAGAASAMTPGEIAF--ANALGGGASRTRGLFLEAFGTAILCLTVLMLAVEK--HR--A----TWFAP 201 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCSSCCC--SCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHTTSC--ST--T----GGGHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcccccee--eccCCccccHHHHHHHHHHHHHHHHHHHHHHccCC--CC--C----cCcHH
Confidence 499999999999998877665443211 11111123567899999999999999887653211 11 1 11347
Q ss_pred HHHHHHHHHHHHHhcCCCCcccChHHHHHHHHhcCCCccchhHHhhhhhHHHHHHHHHHHHHh
Q 024149 94 WAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFM 156 (272)
Q Consensus 94 ~~~g~~v~~~i~~~~~~SGah~NPavTl~~~~~g~~~~~~~~~yi~aQ~lGa~~a~~~~~~l~ 156 (272)
+.+|+.++...++.++.||+.+|||+++++++....-+.+.|+||++|++|+++|+++++.+.
T Consensus 202 l~IGl~v~~~~l~~g~~TG~s~NPAR~~GPal~~~~~~~~~WVy~vgPiiGa~la~~ly~~l~ 264 (279)
T 2w2e_A 202 FVIGIALLIAHLICIYYTGAGLNPARSFGPAVAARSFPNYHWIYWLGPILGAFLAYSIWQMWK 264 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHHTCCCTTTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccccccccChHHHHHHHHHhccchhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 889999999999999999999999999999998764456799999999999999999999887
No 18
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str}
Probab=99.71 E-value=1.4e-17 Score=145.59 Aligned_cols=134 Identities=16% Similarity=0.150 Sum_probs=99.7
Q ss_pred CchhhhhhhhhhhhhccccccCCCC-CC-------CCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCC
Q 024149 14 KFAERQPIGTAAQTQDGKDYVEPPP-AP-------LFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCS 85 (272)
Q Consensus 14 ~Y~~aQ~~Ga~~~~~~~~~~~~~~~-~~-------~~~~~~~~~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~ 85 (272)
.|+.+|++|+++++.+++...+... .+ ......+...+..+.++.|+++||+|++.+++... .+.+ .
T Consensus 111 ~YiiAQ~lGA~~ga~lv~~~~~~~~~~~~~~~~~~~~~~t~p~~~s~~~~f~~E~i~Tf~Lv~~il~~~d--~~~~---~ 185 (256)
T 3llq_A 111 PYVIAQVAGAIVAAAALYVIATGKAGIDLGGFASNGYGEHSPGGYSLVSALLIEIILTAFFLIVILGSTH--GRVP---A 185 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTBTTCCCTTTTCCCCGGGSTTCCCHHHHHHHHHHHHHHHHHHHHHHHS--TTSC---T
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCcccccccccccccccccCCcccCHHHHHHHHHHHHHHHHHHHHHhcC--CCCC---c
Confidence 5999999999999987655432110 00 00001111235789999999999999998765432 1111 1
Q ss_pred ccchhHHHHHHHHHHHHHHHHhcCCCCcccChHHHHHHHHh-cCCCccchhHHhhhhhHHHHHHHHHHHHHh
Q 024149 86 TVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLA-RKLSLTRALFYMVMQCLGAICGAGVVKGFM 156 (272)
Q Consensus 86 ~~~~~~i~~~~g~~v~~~i~~~~~~SGah~NPavTl~~~~~-g~~~~~~~~~yi~aQ~lGa~~a~~~~~~l~ 156 (272)
. ..++.+|+.++.+.++.++.||+.+||||++++.+. ++..|.+.|+||++|++|+++|+++++.+.
T Consensus 186 ~----~~pl~IGl~v~~i~~~~g~~TG~a~NPAR~lGPal~~g~~~~~~~WVy~vgPi~Ga~la~~~y~~l~ 253 (256)
T 3llq_A 186 G----FAPIAIGLALTLIHLISIPVTNTSVNPARSTGQALFVGGWALQQLWLFWLAPIVGGAAGAVIWKLFG 253 (256)
T ss_dssp T----CHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHCHHHHHHTTHHHHHHHHHHHHHHHHHHHHT
T ss_pred c----chhHHHHHHHHHHHHHhccccccccChHHHHHHHHHcCCCcccceeeeeeHHHHHHHHHHHHHHHhc
Confidence 1 237889999999999999999999999999999986 444567899999999999999999998875
No 19
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens}
Probab=99.71 E-value=2.3e-17 Score=145.23 Aligned_cols=136 Identities=15% Similarity=0.076 Sum_probs=101.7
Q ss_pred CchhhhhhhhhhhhhccccccCCCCCCCCCCCCC-chhHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCccchhHH
Q 024149 14 KFAERQPIGTAAQTQDGKDYVEPPPAPLFEPGEL-KSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGI 92 (272)
Q Consensus 14 ~Y~~aQ~~Ga~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~i 92 (272)
.|+.+|++|+++++.+++...+.+.....+.... ...+..+.++.|+++||+|++.+++... .++. .... ..
T Consensus 90 ~Yi~AQ~lGA~~ga~l~~~~~~~~~~~~~g~~~~~~~~s~~~~~~~E~i~Tf~Lv~~il~~~d--~~~~-~~~~----~~ 162 (266)
T 3d9s_A 90 FYVAAQLVGAIAGAGILYGVAPLNARGNLAVNALNNNTTQGQAMVVELILTFQLALCIFASTD--SRRT-SPVG----SP 162 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCHHHHTTTTCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHHC--TTCC-SCCC----CH
T ss_pred HHHHHHHHHHHHHHHHHHHHccccccCceeeccCCccccHHHHHHHHHHHHHHHHHHHHHHhc--ccCC-Cccc----hH
Confidence 5999999999999987765553211111111111 1235688999999999999999876532 1111 1111 23
Q ss_pred HHHHHHHHHHHHHHhcCCCCcccChHHHHHHHHhcCCCccc-hhHHhhhhhHHHHHHHHHHHHHhc
Q 024149 93 AWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTR-ALFYMVMQCLGAICGAGVVKGFMG 157 (272)
Q Consensus 93 ~~~~g~~v~~~i~~~~~~SGah~NPavTl~~~~~g~~~~~~-~~~yi~aQ~lGa~~a~~~~~~l~~ 157 (272)
++.+|+.+.+.....++.||+.+|||+++++.+..+ .|.+ .|+||++|++|+++|+++++.++.
T Consensus 163 pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~-~~~~~~Wvy~vgP~~Ga~la~~~y~~l~~ 227 (266)
T 3d9s_A 163 ALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMN-RFSPAHWVFWVGPIVGAVLAAILYFYLLF 227 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHT-CCCTTHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHhhccccccccHHHHHHHHHHcC-CcccCEeeeehHHHHHHHHHHHHHHHHhC
Confidence 678888888888888899999999999999999765 7888 999999999999999999998873
No 20
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus}
Probab=99.70 E-value=6e-17 Score=146.00 Aligned_cols=137 Identities=15% Similarity=0.152 Sum_probs=101.0
Q ss_pred CchhhhhhhhhhhhhccccccCCCCCCCCCCC-CCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCccchhHH
Q 024149 14 KFAERQPIGTAAQTQDGKDYVEPPPAPLFEPG-ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGI 92 (272)
Q Consensus 14 ~Y~~aQ~~Ga~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~i 92 (272)
.|+.+|++|+++|+.+++...++......+.. .....+..+.++.|+++||+|++.+++.... .+. ... + ..
T Consensus 134 ~YiiAQ~lGA~~GA~lv~~~~~~~~~~~lg~~~~~~~~s~~~~f~~E~i~Tf~Lv~~Ila~~d~--~~~-~~~--~--~~ 206 (340)
T 3iyz_A 134 FYITAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDD--KRT-DVT--G--SV 206 (340)
T ss_pred HHHHHHHHHHHHHHHHHHHhcchhhcCceeeccCCCccCHHHHHHHHHHHHHHHHHHHHHhhcC--ccC-Ccc--c--ch
Confidence 59999999999999887665543221111110 1112356789999999999999988764321 111 001 1 13
Q ss_pred HHHHHHHHHHHHHHhcCCCCcccChHHHHHHHHhcCCCccchhHHhhhhhHHHHHHHHHHHHHhcc
Q 024149 93 AWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGA 158 (272)
Q Consensus 93 ~~~~g~~v~~~i~~~~~~SGah~NPavTl~~~~~g~~~~~~~~~yi~aQ~lGa~~a~~~~~~l~~~ 158 (272)
++++|+.+.+.....++.||+.+|||+++++.+... .|.+.|+||++|++|+++|+++++.++.+
T Consensus 207 pl~IGl~v~i~~~~g~~~TG~amNPARdlGPal~~~-~w~~~WVywvgPiiGailaallY~~l~~p 271 (340)
T 3iyz_A 207 ALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG-NWENHWIYWVGPIIGAVLAGALYEYVFCP 271 (340)
T ss_pred hhHHHHHHHHHHHhccCCccccccHHHHHHHHHHcc-CCCcEeehhHHHHHHHHHHHHHHHHHhCC
Confidence 677888887777777789999999999999999765 68999999999999999999999988743
No 21
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A
Probab=99.70 E-value=4.9e-17 Score=145.14 Aligned_cols=137 Identities=15% Similarity=0.125 Sum_probs=101.8
Q ss_pred CCchhhhhhhhhhhhhccccccCCCCCCCCCCCC-CchhHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCccchhH
Q 024149 13 NKFAERQPIGTAAQTQDGKDYVEPPPAPLFEPGE-LKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQG 91 (272)
Q Consensus 13 ~~Y~~aQ~~Ga~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~ 91 (272)
-.|+.+|++|+++|+.+++...++......+... ....+..+.++.|+++||+|++.+++... ..+. .... .
T Consensus 94 ~~YiiAQ~lGAi~Ga~lv~~~~~~~~~~~~g~~~~~~~~s~~~~f~~E~i~Tf~Lv~~Il~~~d--~~~~-~~~~----~ 166 (301)
T 2zz9_A 94 VFYITAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCD--DKRT-DVTG----S 166 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSCSCGGGTSSCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHSC--SSSS-CCSS----C
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccccCceeeecCCcccchHHHHHHHHHHHHHHHHHHHHhcC--CCCC-Cccc----h
Confidence 3599999999999998877665432211111111 11235688999999999999998875431 1111 1111 2
Q ss_pred HHHHHHHHHHHHHHHhcCCCCcccChHHHHHHHHhcCCCccchhHHhhhhhHHHHHHHHHHHHHhc
Q 024149 92 IAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMG 157 (272)
Q Consensus 92 i~~~~g~~v~~~i~~~~~~SGah~NPavTl~~~~~g~~~~~~~~~yi~aQ~lGa~~a~~~~~~l~~ 157 (272)
.++.+|+.+.+.....++.||+.+|||+++++++... .|.+.|+||++|++|+++|+++++.++.
T Consensus 167 ~pl~IGl~v~i~~~~g~~~TG~a~NPAR~~GPal~~~-~w~~~WVy~vgPiiGailaa~ly~~l~~ 231 (301)
T 2zz9_A 167 VALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG-NWENHWIYWVGPIIGAVLAGALYEYVFC 231 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC-CCTTTTHHHHHHHHHHHHHHHHHHTTTC
T ss_pred HhHHHHHHHHHHHHHhcCCcccccCcHHHHHHHHHhC-CCcceeeeeeHHHHHHHHHHHHHHHHhC
Confidence 3678888887777777789999999999999999865 7999999999999999999999998874
No 22
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}
Probab=99.69 E-value=5.1e-17 Score=139.76 Aligned_cols=135 Identities=16% Similarity=0.147 Sum_probs=97.5
Q ss_pred CchhhhhhhhhhhhhccccccCCCCCCCCCC-CCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCccchhHH
Q 024149 14 KFAERQPIGTAAQTQDGKDYVEPPPAPLFEP-GELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGI 92 (272)
Q Consensus 14 ~Y~~aQ~~Ga~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~i 92 (272)
.|+.+|++|+++++..++...++......+. ......+..+.++.|+++||+|++.++.... .+++. ... ..
T Consensus 86 ~Yi~AQ~lGA~~ga~lv~~~~~~~~~~~lg~~~~~~~~s~~~~~~~E~i~Tf~Lv~~i~~~~~--~~~~~-~~~----~~ 158 (223)
T 3gd8_A 86 FYIAAQCLGAIIGAGILYLVTPPSVVGGLGVTMVHGNLTAGHGLLVELIITFQLVFTIFASCD--SKRTD-VTG----SI 158 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCHHHHTTTTCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHTC--TTCSC-CCS----CH
T ss_pred HHHHHHHHHHHHHHHHHHhhcccccccceeeccCCCccCHHHHHHHHHHHHHHHHHHHHHHhc--cccCC-ccC----Cc
Confidence 5999999999999987655443211000010 0111235678999999999999998765432 11111 111 13
Q ss_pred HHHHHHHHHHHHHHhcCCCCcccChHHHHHHHHhcCCCccchhHHhhhhhHHHHHHHHHHHHHh
Q 024149 93 AWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFM 156 (272)
Q Consensus 93 ~~~~g~~v~~~i~~~~~~SGah~NPavTl~~~~~g~~~~~~~~~yi~aQ~lGa~~a~~~~~~l~ 156 (272)
++.+|+.+.+.....++.||+.+||||++++.+... .|.+.|+||++|++|+++|+++++.++
T Consensus 159 pl~iGl~v~~~~~~g~~~TG~a~NPAR~~GP~l~~~-~w~~~Wvy~vgP~~Ga~la~~~y~~~~ 221 (223)
T 3gd8_A 159 ALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG-NWENHWIYWVGPIIGAVLAGGLYEYVF 221 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHT-CCTTTTHHHHHHHHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHhccCCccccccHHHHHHHHHHhc-CCCcEEeehhHHHHHHHHHHHHHHHHc
Confidence 677787776666666688999999999999999765 699999999999999999999998776
No 23
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A
Probab=99.68 E-value=6.7e-17 Score=142.79 Aligned_cols=136 Identities=15% Similarity=0.091 Sum_probs=99.3
Q ss_pred CchhhhhhhhhhhhhccccccCCCCCCCCCCCCC-chhHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCccchhHH
Q 024149 14 KFAERQPIGTAAQTQDGKDYVEPPPAPLFEPGEL-KSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGI 92 (272)
Q Consensus 14 ~Y~~aQ~~Ga~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~i 92 (272)
.|+.+|++|+++++.+++...++.+....+.... ...+..+.++.|+++||+|++.+++... .++.. ... ..
T Consensus 98 ~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~E~i~T~~Lv~~i~~~~d--~~~~~-~~~----~~ 170 (271)
T 1j4n_A 98 MYIIAQCVGAIVATAILSGITSSLPDNSLGLNALAPGVNSGQGLGIEIIGTLQLVLCVLATTD--RRRRD-LGG----SG 170 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTCTTCCTTCCCCCTTCCTTGGGHHHHHHHHHHHHHHHHHTC--SSCCC-CCS----CH
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCcccccccccCCCccchHHHHHHHHHHHHHHHHHHHhhcc--ccCCC-ccc----cH
Confidence 5999999999999988766554322211111111 1123467889999999999998765421 11111 111 23
Q ss_pred HHHHHHHHHHHHHHhcCCCCcccChHHHHHHHHhcCCCccchhHHhhhhhHHHHHHHHHHHHHhc
Q 024149 93 AWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMG 157 (272)
Q Consensus 93 ~~~~g~~v~~~i~~~~~~SGah~NPavTl~~~~~g~~~~~~~~~yi~aQ~lGa~~a~~~~~~l~~ 157 (272)
++.+|+.+.+.....++.||+.+|||+++++.+... .|.+.|+||++|++|+++|+++++.++.
T Consensus 171 pl~IGl~v~~~~~~~~~~TG~a~NPAR~~Gpal~~~-~~~~~wv~~vgP~~Ga~la~~~y~~~~~ 234 (271)
T 1j4n_A 171 PLAIGFSVALGHLLAIDYTGCGINPARSFGSSVITH-NFQDHWIFWVGPFIGAALAVLIYDFILA 234 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHTT-CCTTTTHHHHHHHHHHHHHHHHHHTTTS
T ss_pred HHHHHHHHHHHHHhccCCCccccChHHHHHHHHHhC-CCcceeHHHHHHHHHHHHHHHHHHHHhC
Confidence 678888887777776789999999999999999765 6889999999999999999999998874
No 24
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A
Probab=99.68 E-value=2.2e-17 Score=147.70 Aligned_cols=142 Identities=19% Similarity=0.180 Sum_probs=101.7
Q ss_pred CchhhhhhhhhhhhhccccccCCCCCCC-CCCC-CCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCccchhH
Q 024149 14 KFAERQPIGTAAQTQDGKDYVEPPPAPL-FEPG-ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQG 91 (272)
Q Consensus 14 ~Y~~aQ~~Ga~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~~~~~ 91 (272)
.|+.+|++|+++++.+++.+.++..... .+.. .....+..+.++.|+++||+|++.++... ..++... .+.....
T Consensus 144 ~YiiAQ~lGAi~Ga~lv~~~~~~~~~~~~~g~~~~~~~~s~~~~f~~E~i~TfiLv~~Il~~~--d~~~~~~-~~~~~~l 220 (304)
T 3cn5_A 144 VYMIAQCLGAICGVGLVKAFMKGPYNQFGGGANSVALGYNKGTALGAEIIGTFVLVYTVFSAT--DPKRSAR-DSHVPIL 220 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCHHHHHHTTTTCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTE--EEEEEST-TSCCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhccCcccccCCCccHHHHHHHHHHHHHHHHHHHhhee--cCccCCC-Ccccccc
Confidence 5999999999999987655443210000 0000 01123568899999999999999887432 1111110 0000012
Q ss_pred HHHHHHHHHHHHHHHhcCCCCcccChHHHHHHHHh--cCCCccchhHHhhhhhHHHHHHHHHHHHHhcc
Q 024149 92 IAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLA--RKLSLTRALFYMVMQCLGAICGAGVVKGFMGA 158 (272)
Q Consensus 92 i~~~~g~~v~~~i~~~~~~SGah~NPavTl~~~~~--g~~~~~~~~~yi~aQ~lGa~~a~~~~~~l~~~ 158 (272)
.++.+|+.+++..++.++.||+.+|||+++++++. +...|.+.|+||++|++|+++|+++++.++.+
T Consensus 221 apl~IGl~V~~~~l~~g~~TG~amNPAR~~GPal~~~~~~~w~~~WvywvgPiiGa~laa~~y~~l~~~ 289 (304)
T 3cn5_A 221 APLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNSNKVWDDQWIFWVGPFIGAAVAAAYHQYVLRA 289 (304)
T ss_dssp CHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHCCHHHHHHTTHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred hHHHHHHHHHHHHHhccCCCccccChHHHHHHHHHHccCCCcCceEEEeehHHHHHHHHHHHHHHHhCC
Confidence 37889999999999999999999999999999997 23478899999999999999999999888743
No 25
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*
Probab=99.63 E-value=3.4e-16 Score=139.04 Aligned_cols=138 Identities=17% Similarity=0.125 Sum_probs=99.1
Q ss_pred CchhhhhhhhhhhhhccccccCCC--------C-C----------CCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 024149 14 KFAERQPIGTAAQTQDGKDYVEPP--------P-A----------PLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTV 74 (272)
Q Consensus 14 ~Y~~aQ~~Ga~~~~~~~~~~~~~~--------~-~----------~~~~~~~~~~~~~~~~~~aE~igT~~lv~~~~~~~ 74 (272)
.|+.+|++|+++++.+++...++. . . ....+......+.++.++.|+++||+|++.+++..
T Consensus 88 ~Yi~AQ~lGA~~ga~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~f~t~p~~~~s~~~~~~~E~i~Tf~Lv~~il~~~ 167 (281)
T 1ldf_A 88 PFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVITAILMGLILALT 167 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTSGGGHHHHTTTSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhccccccccccccccccccceeeccCCccccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 599999999999987754332210 0 0 00111111123578999999999999999887653
Q ss_pred hcccccCCCCCccchhHHHHHHHHHHHHHHHHhcCCCCcccChHHHHHHHHhc------CCCcc------chhHHhhhhh
Q 024149 75 MGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLAR------KLSLT------RALFYMVMQC 142 (272)
Q Consensus 75 ~~~~~~~~~~~~~~~~~i~~~~g~~v~~~i~~~~~~SGah~NPavTl~~~~~g------~~~~~------~~~~yi~aQ~ 142 (272)
. .++.. .. ....++.+|+.++.+.++.++.||+.+||||++++.+.. ...|. +.|+||++|+
T Consensus 168 d--~~~~~--~~--~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~g~g~~~~~~~~~~~~~WVy~vgPi 241 (281)
T 1ldf_A 168 D--DGNGV--PR--GPLAPLLIGLLIAVIGASMGPLTGTAMNPARDFGPKVFAWLAGWGNVAFTGGRDIPYFLVPLFGPI 241 (281)
T ss_dssp C--TTSSS--CC--GGGHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHTTTTTHHHHTTCSSCTTHHHHHHHH
T ss_pred c--cCCCC--cc--cchHHHHHHHHHHHHHHhcccccccccCcHhhHHHHHHHHhcccccccccccCCCceeeHHhHHHH
Confidence 2 11110 00 113478999999999999999999999999999999864 22232 6999999999
Q ss_pred HHHHHHHHHHHHHhc
Q 024149 143 LGAICGAGVVKGFMG 157 (272)
Q Consensus 143 lGa~~a~~~~~~l~~ 157 (272)
+|+++|+++++.++.
T Consensus 242 ~Ga~la~~~y~~l~~ 256 (281)
T 1ldf_A 242 VGAIVGAFAYRKLIG 256 (281)
T ss_dssp HHHHHHHHHHHHHTG
T ss_pred HHHHHHHHHHHHHhC
Confidence 999999999998873
No 26
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}
Probab=99.61 E-value=7e-16 Score=135.42 Aligned_cols=138 Identities=19% Similarity=0.146 Sum_probs=98.3
Q ss_pred CchhhhhhhhhhhhhccccccCCC----CCCCC-CCCC-CchhHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCcc
Q 024149 14 KFAERQPIGTAAQTQDGKDYVEPP----PAPLF-EPGE-LKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTV 87 (272)
Q Consensus 14 ~Y~~aQ~~Ga~~~~~~~~~~~~~~----~~~~~-~~~~-~~~~~~~~~~~aE~igT~~lv~~~~~~~~~~~~~~~~~~~~ 87 (272)
.|+.+|++|+++++.+++...++. ..+.. .... .......+.++.|+++||+|++.+++... .++... .
T Consensus 90 ~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~t~p~~~~~~~E~i~Tf~Lv~~i~~~~d--~~~~~~---~ 164 (258)
T 3c02_A 90 VYFFAQLLGAFVGTSTVYGLYHGFISNSKIPQFAWETSRNPSISLTGAFFNELILTGILLLVILVVVD--ENICGK---F 164 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTHHHHHTTCSCTTCSSCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHHC--HHHHCS---C
T ss_pred HHHHHHHHHHHHHHHHHHHHcchhhhhccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHHHhC--cccCCc---c
Confidence 599999999999988764443211 00000 0000 11122356999999999999998876532 111100 1
Q ss_pred chhHHHHHHHHHHHHHHHHhcCCCCcccChHHHHHHHHhcC-----CCc----cchhHHhhhhhHHHHHHHHHHHHHh
Q 024149 88 GIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARK-----LSL----TRALFYMVMQCLGAICGAGVVKGFM 156 (272)
Q Consensus 88 ~~~~i~~~~g~~v~~~i~~~~~~SGah~NPavTl~~~~~g~-----~~~----~~~~~yi~aQ~lGa~~a~~~~~~l~ 156 (272)
..+.+++.+|+.++...++.++.||+.+||||++++++... ..| .+.|+||++|++|+++|+++++.++
T Consensus 165 ~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~~g~~~~~~~~~y~Wv~~vgP~~Ga~la~~~y~~~~ 242 (258)
T 3c02_A 165 HILKLSSVVGLIILCIGITFGGNTGFALNPSRDLGSRFLSLIAYGKDTFTKDNFYFWVPLVAPCVGSVVFCQFYDKVI 242 (258)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCTHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTH
T ss_pred cccHHHHHHHHHHHHHHHhccCccCCCcChHHHHHHHHHHhccccccccccCCceeehHHHHHHHHHHHHHHHHHHHh
Confidence 11223788999999999999999999999999999999642 245 4489999999999999999998887
No 27
>3kcu_A Probable formate transporter 1; TCDB ID 2.A.44.1.1, channel, cell inner membrane, cell membrane, membrane, transmembrane; HET: MA5; 2.24A {Escherichia coli O157} PDB: 3kcv_A 3q7k_A
Probab=55.88 E-value=99 Score=26.59 Aligned_cols=106 Identities=14% Similarity=0.141 Sum_probs=57.4
Q ss_pred hHHHHHHHHHHHHHHHHhcCC-CCcccChHHHHHHHHhcCCCccchhHHhhhhhHHHHHHHHHHHHHhc-cccccccCC-
Q 024149 90 QGIAWAFGGMIFVLVYCTAGI-SGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMG-AGQYGRLAG- 166 (272)
Q Consensus 90 ~~i~~~~g~~v~~~i~~~~~~-SGah~NPavTl~~~~~g~~~~~~~~~yi~aQ~lGa~~a~~~~~~l~~-~~~~~~~~~- 166 (272)
+.-++.+++.+.++++.-+.. || |--.+ ...+.++.+|.+.+--|.-=.+|=++|++++-.+.. .......++
T Consensus 69 ll~g~~F~vGL~lVvl~G~ELFTg---n~l~~-~a~~~~~is~~~~lr~W~~v~~gNliGal~~a~l~~~s~~~~~~~~~ 144 (285)
T 3kcu_A 69 LVGGICFSLGLILCVVCGADLFTS---TVLIV-VAKASGRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYMTANGQ 144 (285)
T ss_dssp HHHHHHHTHHHHHHHHHTCCCTTT---THHHH-HHHTTTCCCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHTGGGTTTTH
T ss_pred HHHHHHHHHHHHHHHHhCcccccc---chHHH-HHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccCchH
Confidence 334566666666666655543 44 32223 334578888887766655555666666555544421 111111000
Q ss_pred -C--cccc---cccCCccchhhHHHHHHHHHHHHHHHhc
Q 024149 167 -G--ANVV---AHGYTKGDGLGAEIIGTFVLVYTVFSAT 199 (272)
Q Consensus 167 -~--~~~~---~~~~~~~~~f~~E~~~T~iL~~~il~~~ 199 (272)
+ ...+ .-+.+..+.|+-=++|.++.++.++...
T Consensus 145 ~~~~~~~ia~~K~~~~~~~~f~~GIlcN~lVclaVw~~~ 183 (285)
T 3kcu_A 145 WGLNVLQTADHKVHHTFIEAVCLGILANLMVCLAVWMSY 183 (285)
T ss_dssp HHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0001 1234557888888899999998888654
No 28
>3tds_E Formate/nitrite transporter; membrane protein; HET: PG4 BOG; 1.98A {Clostridium difficile} PDB: 3tdo_A* 3tdr_A* 3te0_A* 3tdx_A* 3te2_A* 3te1_A* 3tdp_A*
Probab=42.06 E-value=1.4e+02 Score=25.38 Aligned_cols=107 Identities=11% Similarity=0.079 Sum_probs=58.4
Q ss_pred hHHHHHHHHHHHHHHHHhcCC-CCcccChHHHHHHHHhcCCCccchhHHhhhhhHHHHHHHHHHHHHhccc-cccccCCC
Q 024149 90 QGIAWAFGGMIFVLVYCTAGI-SGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAG-QYGRLAGG 167 (272)
Q Consensus 90 ~~i~~~~g~~v~~~i~~~~~~-SGah~NPavTl~~~~~g~~~~~~~~~yi~aQ~lGa~~a~~~~~~l~~~~-~~~~~~~~ 167 (272)
+.-++.+++.+.++++.-+.. || |-.......+.++.+|.+.+--|.--.+|=++|++++-.++... ..+.....
T Consensus 65 ll~g~~F~~Gl~lVvl~g~eLfTg---n~l~~~~~~~~~~~s~~~~lr~W~~v~~gNliGa~~~a~l~~~sg~~~~~~~~ 141 (268)
T 3tds_E 65 IVMGLSFAIALSLVIMTGTELFTG---NNMVMSAGMLNKGVSIKDTSKIWAYSWVGNLIGALVLGIIFVGTGLVDKGPVA 141 (268)
T ss_dssp HHHHHTCTHHHHHHHHHTCCCHHH---HHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSSSHHH
T ss_pred HHHHHHHHHHHHHHHHhCcccccc---chHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCcHHH
Confidence 334555555555555543332 22 43333345578888988887776666666666666665554111 11000000
Q ss_pred c--ccc---cccCCccchhhHHHHHHHHHHHHHHHhc
Q 024149 168 A--NVV---AHGYTKGDGLGAEIIGTFVLVYTVFSAT 199 (272)
Q Consensus 168 ~--~~~---~~~~~~~~~f~~E~~~T~iL~~~il~~~ 199 (272)
. ... .-+.+..+.|+-=+.|.++.++.++...
T Consensus 142 ~~~~~ia~~K~~~~~~~~f~~gIlcN~lVclaVw~~~ 178 (268)
T 3tds_E 142 EFFANTAASKASMPFTALFFRGILCNILVCVSVLCSF 178 (268)
T ss_dssp HHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 0 000 1134556788888889999888887643
No 29
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=38.16 E-value=3.5 Score=36.63 Aligned_cols=21 Identities=33% Similarity=0.547 Sum_probs=17.4
Q ss_pred cCCCCcccChHHHHHHHHhcC
Q 024149 108 AGISGGHINPAVTLGLFLARK 128 (272)
Q Consensus 108 ~~~SGah~NPavTl~~~~~g~ 128 (272)
++-||||++|+.+++-.+..+
T Consensus 9 ~GGTgGHi~palala~~L~~~ 29 (365)
T 3s2u_A 9 AGGTGGHVFPALACAREFQAR 29 (365)
T ss_dssp CCSSHHHHHHHHHHHHHHHHT
T ss_pred cCCCHHHHHHHHHHHHHHHhC
Confidence 344899999999999999654
No 30
>4fc4_A Nitrite transporter NIRC; alpha-helical inner membrane protein, ION channel, cytoplasm membrane, transport protein; HET: BOG; 2.40A {Salmonella enterica subsp}
Probab=33.88 E-value=2.1e+02 Score=24.09 Aligned_cols=105 Identities=12% Similarity=0.069 Sum_probs=56.7
Q ss_pred hHHHHHHHHHHHHHHHHhcCCCCccc---ChHHHHHHHHhcCCCccchhHHhhhhhHHHHHHHHHHHHHhcccccc-ccC
Q 024149 90 QGIAWAFGGMIFVLVYCTAGISGGHI---NPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYG-RLA 165 (272)
Q Consensus 90 ~~i~~~~g~~v~~~i~~~~~~SGah~---NPavTl~~~~~g~~~~~~~~~yi~aQ~lGa~~a~~~~~~l~~~~~~~-~~~ 165 (272)
+.-++.+++.+.++++. |+.+ |-.......+.++.+|.+.+--|.--.+|=++|++++-.++...... ...
T Consensus 59 ll~g~~F~vGl~lVvl~-----g~eLfTgn~l~~~~~~~~~~~s~~~~lr~W~~v~~gNliGa~~~a~l~~~~g~~~~~~ 133 (261)
T 4fc4_A 59 LVMGATFGIALTLVIIA-----GSELFTGHTMFLTLGVKAGTISHGQMWAILPQTWLGNLVGSVFVALLYSWGGGSLLPV 133 (261)
T ss_dssp HHHHHHTTHHHHHHHHT-----CCCCHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTSSC
T ss_pred HHHHHHHHHHHHHHHHc-----CCcccccchHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccCch
Confidence 33355555555555553 3444 43333345557888988877777666666666666555444111110 000
Q ss_pred CCcc--ccc---ccCCccchhhHHHHHHHHHHHHHHHhc
Q 024149 166 GGAN--VVA---HGYTKGDGLGAEIIGTFVLVYTVFSAT 199 (272)
Q Consensus 166 ~~~~--~~~---~~~~~~~~f~~E~~~T~iL~~~il~~~ 199 (272)
.... ... -..+..+.|+-=+.|.++.++.++...
T Consensus 134 ~~~~~~~ia~~K~~~~~~~~f~~gIlcN~lVclaVw~~~ 172 (261)
T 4fc4_A 134 DTSIVHSVALAKTTAPATVLFFKGALCNWLVCLAIWMAI 172 (261)
T ss_dssp TTSHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHh
Confidence 0000 111 123456778888888898888887643
Done!