RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= 024150
         (272 letters)



>d1iuqa_ c.112.1.1 (A:) Glycerol-3-phosphate (1)-acyltransferase
           {Cushaw squash (Cucurbita moschata) [TaxId: 3662]}
          Length = 367

 Score = 30.4 bits (68), Expect = 0.23
 Identities = 8/32 (25%), Positives = 16/32 (50%)

Query: 91  GVLFICNHRTVLDPVVTAVALGRKISCVTYSI 122
            V+ I NH+T  DP + ++ L +    +  + 
Sbjct: 131 NVVLISNHQTEADPAIISLLLEKTNPYIAENT 162


>d1a4ma_ c.1.9.1 (A:) Adenosine deaminase (ADA) {Mouse (Mus
           musculus) [TaxId: 10090]}
          Length = 349

 Score = 28.3 bits (62), Expect = 0.98
 Identities = 6/53 (11%), Positives = 18/53 (33%)

Query: 156 DLVICPEGTTCREPFLLRFSALFAELTDRIVPVAINTKQSVFHGTTLPPELTV 208
              +CP  +     +  + +       +     ++NT   +   +TL  +  +
Sbjct: 255 HFEVCPWSSYLTGAWDPKTTHAVVRFKNDKANYSLNTDDPLIFKSTLDTDYQM 307


>d2amxa1 c.1.9.1 (A:20-376) Adenosine deaminase (ADA) {Plasmodium
           yoelii [TaxId: 5861]}
          Length = 357

 Score = 27.9 bits (61), Expect = 1.2
 Identities = 8/53 (15%), Positives = 16/53 (30%)

Query: 156 DLVICPEGTTCREPFLLRFSALFAELTDRIVPVAINTKQSVFHGTTLPPELTV 208
            L +CP             +    +L D  V V++N+       + +      
Sbjct: 267 LLEVCPISNLLLNNVKSMDTHPIRKLYDAGVKVSVNSDDPGMFLSNINDNYEK 319


>d1vr3a1 b.82.1.6 (A:1-179) Acireductone dioxygenase {Mouse (Mus
           musculus) [TaxId: 10090]}
          Length = 179

 Score = 26.3 bits (58), Expect = 2.8
 Identities = 8/24 (33%), Positives = 15/24 (62%)

Query: 141 REKDAAHIKQLLEEGDLVICPEGT 164
           R+K+   I+  +E+GD++  P G 
Sbjct: 108 RDKEDKWIRISMEKGDMITLPAGI 131


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.320    0.138    0.408 

Gapped
Lambda     K      H
   0.267   0.0485    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,021,665
Number of extensions: 48227
Number of successful extensions: 135
Number of sequences better than 10.0: 1
Number of HSP's gapped: 135
Number of HSP's successfully gapped: 5
Length of query: 272
Length of database: 2,407,596
Length adjustment: 84
Effective length of query: 188
Effective length of database: 1,254,276
Effective search space: 235803888
Effective search space used: 235803888
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.4 bits)