Your job contains 1 sequence.
>024152
MASLLRNASLLRRCLLSVSPPHPHPQSFRGGMLETSTQICNFSSKSKRKSKSDGSDSGEE
NMSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGR
VVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPD
CGEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSH
SLSLSQTILIFINQVFSINLNKIIDESSGHL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 024152
(271 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2050439 - symbol:RECA2 "A. thaliana recA homol... 839 9.1e-84 1
TIGR_CMR|CHY_1166 - symbol:CHY_1166 "recA protein" specie... 578 4.2e-56 1
TIGR_CMR|BA_3915 - symbol:BA_3915 "recA protein, group I ... 572 1.8e-55 1
UNIPROTKB|P16971 - symbol:recA "Protein RecA" species:224... 568 4.8e-55 1
TIGR_CMR|CBU_1054 - symbol:CBU_1054 "recA protein" specie... 554 1.5e-53 1
TIGR_CMR|GSU_0145 - symbol:GSU_0145 "recA protein" specie... 552 2.4e-53 1
UNIPROTKB|P0A5U4 - symbol:recA "Protein RecA" species:177... 551 3.9e-53 1
TIGR_CMR|NSE_0530 - symbol:NSE_0530 "recA protein" specie... 549 4.9e-53 1
TIGR_CMR|SPO_2034 - symbol:SPO_2034 "recA protein" specie... 549 4.9e-53 1
UNIPROTKB|P0A7G6 - symbol:recA species:83333 "Escherichia... 547 8.0e-53 1
DICTYBASE|DDB_G0276073 - symbol:recA "recombinase A" spec... 546 1.0e-52 1
TIGR_CMR|SO_3430 - symbol:SO_3430 "recA protein" species:... 545 1.3e-52 1
TAIR|locus:2103131 - symbol:AT3G32920 species:3702 "Arabi... 539 5.6e-52 1
UNIPROTKB|P45383 - symbol:recA "Protein RecA" species:243... 532 3.1e-51 1
TIGR_CMR|VC_0543 - symbol:VC_0543 "recA protein" species:... 532 3.1e-51 1
TIGR_CMR|APH_1354 - symbol:APH_1354 "recA protein" specie... 526 1.3e-50 1
TAIR|locus:2100038 - symbol:RECA3 "RECA homolog 3" specie... 524 2.2e-50 1
TIGR_CMR|ECH_1109 - symbol:ECH_1109 "recA protein" specie... 521 4.6e-50 1
TIGR_CMR|CJE_1845 - symbol:CJE_1845 "recA protein" specie... 516 1.5e-49 1
TIGR_CMR|DET_1606 - symbol:DET_1606 "recA protein" specie... 501 6.0e-48 1
TAIR|locus:2207445 - symbol:RECA1 "homolog of bacterial R... 480 1.0e-45 1
UNIPROTKB|P78014 - symbol:recA "Protein RecA" species:272... 368 7.4e-34 1
DICTYBASE|DDB_G0274901 - symbol:DDB_G0274901 species:4468... 106 7.2e-08 2
UNIPROTKB|Q0MR21 - symbol:Q0MR21 "DMC1-like protein" spec... 116 0.00014 1
UNIPROTKB|Q9C0P6 - symbol:dmc1 "Putative DMC1 protein" sp... 115 0.00020 1
ASPGD|ASPL0000094064 - symbol:AN11929 species:162425 "Eme... 115 0.00052 1
ASPGD|ASPL0000098803 - symbol:AN11930 species:162425 "Eme... 115 0.00052 1
UNIPROTKB|Q5ARI8 - symbol:AN9092.2 "Meiotic recombination... 115 0.00052 1
UNIPROTKB|Q4WAR2 - symbol:AFUA_7G02200 "Meiotic recombina... 110 0.00072 1
>TAIR|locus:2050439 [details] [associations]
symbol:RECA2 "A. thaliana recA homolog 2" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003697 "single-stranded DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0006259 "DNA metabolic process" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA;ISS] [GO:0006310 "DNA
recombination" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA;ISS] [GO:0009432 "SOS response"
evidence=IEA;ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR013765
InterPro:IPR020584 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005739 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006281 EMBL:AC005917
GO:GO:0006310 GO:GO:0003697 GO:GO:0008094 GO:GO:0009432
UniGene:At.66366 eggNOG:COG0468 EMBL:BT029745 IPI:IPI00520863
PIR:D84577 RefSeq:NP_179539.2 ProteinModelPortal:Q9ZUP2 SMR:Q9ZUP2
STRING:Q9ZUP2 PaxDb:Q9ZUP2 PRIDE:Q9ZUP2 EnsemblPlants:AT2G19490.1
GeneID:816468 KEGG:ath:AT2G19490 GeneFarm:2671 TAIR:At2g19490
HOGENOM:HOG000264120 InParanoid:Q9ZUP2 KO:K03553 OMA:KAFFREH
PhylomeDB:Q9ZUP2 ProtClustDB:CLSN2681153 Genevestigator:Q9ZUP2
GermOnline:AT2G19490 Gene3D:3.30.250.10 InterPro:IPR023400
PANTHER:PTHR22942:SF1 SUPFAM:SSF54752 TIGRFAMs:TIGR02012
Uniprot:Q9ZUP2
Length = 430
Score = 839 (300.4 bits), Expect = 9.1e-84, P = 9.1e-84
Identities = 171/229 (74%), Positives = 187/229 (81%)
Query: 29 RGGMLETSTQICNFXXXXXXXXXXXXXXXXEENMSKKDLALQQALDQITSSFGKGSIMWL 88
R ++ TS Q+ F EE MSKK++ALQQALDQITSSFGKGSIM+L
Sbjct: 22 RRSVVGTSFQLRGFAAKAKKKSKSDGNGSSEEGMSKKEIALQQALDQITSSFGKGSIMYL 81
Query: 89 GRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTTLALHVIAEAQRQGG 148
GR+V+PR+VPV STGSFALD+ALG GGLPKGRVVEIYGPEASGKTTLALHVIAEAQ+QGG
Sbjct: 82 GRAVSPRNVPVFSTGSFALDVALGVGGLPKGRVVEIYGPEASGKTTLALHVIAEAQKQGG 141
Query: 149 YCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSLVDTLIRSGXXXXXXXXXXXX 208
CVF+DAEHALD SLA+ IGV TENLLL+QPDCGEQALSLVDTLIRSG
Sbjct: 142 TCVFVDAEHALDSSLAKAIGVNTENLLLSQPDCGEQALSLVDTLIRSGSVDVIVVDSVAA 201
Query: 209 LVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFINQVFS 257
LVPKGEL+GEMGDAHMAMQARLMSQALRKLSHSLSLSQT+LIFINQV S
Sbjct: 202 LVPKGELEGEMGDAHMAMQARLMSQALRKLSHSLSLSQTLLIFINQVRS 250
>TIGR_CMR|CHY_1166 [details] [associations]
symbol:CHY_1166 "recA protein" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0006310 "DNA
recombination" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS] [GO:0009432 "SOS response" evidence=ISS]
HAMAP:MF_00268 InterPro:IPR003593 InterPro:IPR013765
InterPro:IPR020584 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0005737
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003684 GO:GO:0006281
GO:GO:0006310 GO:GO:0003697 GO:GO:0008094 GO:GO:0009432
eggNOG:COG0468 HOGENOM:HOG000264120 KO:K03553 Gene3D:3.30.250.10
InterPro:IPR023400 PANTHER:PTHR22942:SF1 SUPFAM:SSF54752
TIGRFAMs:TIGR02012 OMA:TRKGAWY RefSeq:YP_360011.1
ProteinModelPortal:Q3ACX3 SMR:Q3ACX3 STRING:Q3ACX3 GeneID:3727219
KEGG:chy:CHY_1166 PATRIC:21275472
BioCyc:CHYD246194:GJCN-1165-MONOMER Uniprot:Q3ACX3
Length = 343
Score = 578 (208.5 bits), Expect = 4.2e-56, P = 4.2e-56
Identities = 113/194 (58%), Positives = 145/194 (74%)
Query: 62 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 121
M+ K AL+ + QI FGKGSIM LG + V V+ TGS ALD+ALG GG+P+GRV
Sbjct: 1 MNDKLKALELTISQIEKQFGKGSIMRLGENTGKFQVEVIPTGSLALDLALGVGGVPRGRV 60
Query: 122 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 181
VEI+GPE+SGKTT+ALH+IAEAQ+ GG FIDAEHALDP A+ +GV ENLL++QPD
Sbjct: 61 VEIFGPESSGKTTVALHIIAEAQKMGGIAAFIDAEHALDPVYAQKLGVDIENLLVSQPDT 120
Query: 182 GEQALSLVDTLIRSGXXXXXXXXXXXXLVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 241
GEQAL + ++L+RSG LVP+ E++GEMGDAH+ +QARLMSQALRKL+ +
Sbjct: 121 GEQALEIAESLVRSGAIDVIVIDSVAALVPRAEIEGEMGDAHVGLQARLMSQALRKLTGA 180
Query: 242 LSLSQTILIFINQV 255
+S S+T+ IFINQ+
Sbjct: 181 ISKSKTVAIFINQM 194
>TIGR_CMR|BA_3915 [details] [associations]
symbol:BA_3915 "recA protein, group I intron-containing"
species:198094 "Bacillus anthracis str. Ames" [GO:0003677 "DNA
binding" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] [GO:0006310 "DNA
recombination" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS] [GO:0009432 "SOS response" evidence=ISS]
HAMAP:MF_00268 InterPro:IPR003593 InterPro:IPR013765
InterPro:IPR020584 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0005737
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006281
GO:GO:0006310 GO:GO:0003697 GO:GO:0008094 GO:GO:0009432
eggNOG:COG0468 HOGENOM:HOG000264120 KO:K03553 Gene3D:3.30.250.10
InterPro:IPR023400 PANTHER:PTHR22942:SF1 SUPFAM:SSF54752
TIGRFAMs:TIGR02012 EMBL:AF229167 RefSeq:NP_846162.1
RefSeq:YP_029881.1 ProteinModelPortal:Q9APZ2 SMR:Q9APZ2
IntAct:Q9APZ2 EnsemblBacteria:EBBACT00000011833
EnsemblBacteria:EBBACT00000023909 EnsemblBacteria:EBBACT00000082851
GeneID:1087627 GeneID:2850041 KEGG:ban:BA_3915 KEGG:bat:BAS3629
PATRIC:18785420 ProtClustDB:PRK09354 Uniprot:Q9APZ2
Length = 343
Score = 572 (206.4 bits), Expect = 1.8e-55, P = 1.8e-55
Identities = 112/194 (57%), Positives = 140/194 (72%)
Query: 62 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 121
MS + AL AL QI FGKGSIM LG R V VS+GS ALD+ALG GG P+GR+
Sbjct: 1 MSDRQAALDMALKQIEKQFGKGSIMKLGEQAE-RKVSTVSSGSLALDVALGVGGYPRGRI 59
Query: 122 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 181
+EIYGPE+SGKTT++LH IAE QRQGG FIDAEHA+DP A+ +GV + LLL+QPD
Sbjct: 60 IEIYGPESSGKTTVSLHAIAEVQRQGGQAAFIDAEHAMDPVYAQKLGVNIDELLLSQPDT 119
Query: 182 GEQALSLVDTLIRSGXXXXXXXXXXXXLVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 241
GEQ L + + L+RSG LVPK E++G+MGD+H+ +QARLMSQALRKLS +
Sbjct: 120 GEQGLEIAEALVRSGAVDIIVIDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKLSGA 179
Query: 242 LSLSQTILIFINQV 255
++ S+TI IFINQ+
Sbjct: 180 INKSKTIAIFINQI 193
>UNIPROTKB|P16971 [details] [associations]
symbol:recA "Protein RecA" species:224308 "Bacillus
subtilis subsp. subtilis str. 168" [GO:0005515 "protein binding"
evidence=IPI] HAMAP:MF_00268 InterPro:IPR003593 InterPro:IPR013765
InterPro:IPR020584 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0005737
GO:GO:0006281 GO:GO:0006310 GO:GO:0003697 EMBL:AL009126
GenomeReviews:AL009126_GR GO:GO:0009295 GO:GO:0008094 GO:GO:0009432
eggNOG:COG0468 HOGENOM:HOG000264120 KO:K03553 Gene3D:3.30.250.10
InterPro:IPR023400 PANTHER:PTHR22942:SF1 SUPFAM:SSF54752
TIGRFAMs:TIGR02012 ProtClustDB:PRK09354 EMBL:X52132 EMBL:U87792
EMBL:U56238 PIR:S10370 RefSeq:NP_389576.2 ProteinModelPortal:P16971
SMR:P16971 IntAct:P16971 EnsemblBacteria:EBBACT00000002648
GeneID:939497 KEGG:bsu:BSU16940 PATRIC:18975195 GenoList:BSU16940
BioCyc:BSUB:BSU16940-MONOMER Uniprot:P16971
Length = 348
Score = 568 (205.0 bits), Expect = 4.8e-55, P = 4.8e-55
Identities = 112/194 (57%), Positives = 139/194 (71%)
Query: 62 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 121
MS + AL AL QI FGKGSIM LG R + V +GS ALD ALG GG P+GR+
Sbjct: 1 MSDRQAALDMALKQIEKQFGKGSIMKLGEKTDTR-ISTVPSGSLALDTALGIGGYPRGRI 59
Query: 122 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 181
+E+YGPE+SGKTT+ALH IAE Q+QGG FIDAEHALDP A+ +GV E LLL+QPD
Sbjct: 60 IEVYGPESSGKTTVALHAIAEVQQQGGQAAFIDAEHALDPVYAQKLGVNIEELLLSQPDT 119
Query: 182 GEQALSLVDTLIRSGXXXXXXXXXXXXLVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 241
GEQAL + + L+RSG LVPK E++G+MGD+H+ +QARLMSQALRKLS +
Sbjct: 120 GEQALEIAEALVRSGAVDIVVVDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKLSGA 179
Query: 242 LSLSQTILIFINQV 255
++ S+TI IFINQ+
Sbjct: 180 INKSKTIAIFINQI 193
>TIGR_CMR|CBU_1054 [details] [associations]
symbol:CBU_1054 "recA protein" species:227377 "Coxiella
burnetii RSA 493" [GO:0006310 "DNA recombination" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0009432 "SOS response" evidence=ISS] HAMAP:MF_00268
InterPro:IPR003593 InterPro:IPR013765 InterPro:IPR020584
InterPro:IPR020587 InterPro:IPR020588 Pfam:PF00154 PRINTS:PR00142
PROSITE:PS00321 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0006281 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0006310 GO:GO:0003697 GO:GO:0008094
GO:GO:0009432 eggNOG:COG0468 HOGENOM:HOG000264120 KO:K03553
Gene3D:3.30.250.10 InterPro:IPR023400 PANTHER:PTHR22942:SF1
SUPFAM:SSF54752 TIGRFAMs:TIGR02012 ProtClustDB:PRK09354
RefSeq:NP_820055.1 ProteinModelPortal:Q83CQ4 SMR:Q83CQ4
PRIDE:Q83CQ4 GeneID:1208955 KEGG:cbu:CBU_1054 PATRIC:17930833
OMA:MLIFINQ BioCyc:CBUR227377:GJ7S-1046-MONOMER Uniprot:Q83CQ4
Length = 343
Score = 554 (200.1 bits), Expect = 1.5e-53, P = 1.5e-53
Identities = 110/194 (56%), Positives = 135/194 (69%)
Query: 62 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 121
M + AL AL QI FGKGS+M LG + V+STGS LDIALG GGLP+GR+
Sbjct: 1 MDNRSNALNAALSQIERQFGKGSVMRLGDPGLIPDIDVISTGSLGLDIALGVGGLPRGRI 60
Query: 122 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 181
+EIYGPEASGKTTLAL IA QR GG F+DAEHALD A +GVK E+LL++QPD
Sbjct: 61 IEIYGPEASGKTTLALQTIASCQRMGGTAAFVDAEHALDAIYAGKLGVKVEDLLVSQPDT 120
Query: 182 GEQALSLVDTLIRSGXXXXXXXXXXXXLVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 241
GEQAL + D L+RSG L PK E++G+MGD+HM +QARLMSQALRKL+ +
Sbjct: 121 GEQALEITDMLVRSGAVDLIVIDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTAN 180
Query: 242 LSLSQTILIFINQV 255
+ S T++IFINQ+
Sbjct: 181 IKKSNTLVIFINQI 194
>TIGR_CMR|GSU_0145 [details] [associations]
symbol:GSU_0145 "recA protein" species:243231 "Geobacter
sulfurreducens PCA" [GO:0006310 "DNA recombination" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0009432 "SOS response" evidence=ISS] HAMAP:MF_00268
InterPro:IPR003593 InterPro:IPR013765 InterPro:IPR020584
InterPro:IPR020587 InterPro:IPR020588 Pfam:PF00154 PRINTS:PR00142
PROSITE:PS00321 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0006281 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0006310 GO:GO:0003697 GO:GO:0008094
GO:GO:0009432 eggNOG:COG0468 HOGENOM:HOG000264120 KO:K03553
Gene3D:3.30.250.10 InterPro:IPR023400 PANTHER:PTHR22942:SF1
SUPFAM:SSF54752 TIGRFAMs:TIGR02012 ProtClustDB:PRK09354 OMA:TRKGAWY
RefSeq:NP_951207.1 ProteinModelPortal:P62215 SMR:P62215
GeneID:2688015 KEGG:gsu:GSU0145 PATRIC:22023038
BioCyc:GSUL243231:GH27-171-MONOMER Uniprot:P62215
Length = 338
Score = 552 (199.4 bits), Expect = 2.4e-53, P = 2.4e-53
Identities = 106/192 (55%), Positives = 139/192 (72%)
Query: 64 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 123
+++ A++ AL QI FGKG+IM LG V + TGS +LD+ALG GG+P+GR++E
Sbjct: 4 EREKAIELALSQIEKQFGKGAIMRLGADEALPDVAAIPTGSLSLDLALGVGGVPRGRIIE 63
Query: 124 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 183
IYGPE+SGKTTLALH+ AEAQ+ GG F+DAEHALD A +GVKT++LL++QPD GE
Sbjct: 64 IYGPESSGKTTLALHIAAEAQKMGGIAAFVDAEHALDIGYARKLGVKTDDLLVSQPDTGE 123
Query: 184 QALSLVDTLIRSGXXXXXXXXXXXXLVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 243
QAL + + L+RSG LVPK E++GEMGD+HM +QARLMSQALRKL+ +S
Sbjct: 124 QALEIAEMLVRSGAVDVLVIDSVAALVPKAEIEGEMGDSHMGLQARLMSQALRKLTGIIS 183
Query: 244 LSQTILIFINQV 255
S +IFINQ+
Sbjct: 184 KSNCCVIFINQI 195
>UNIPROTKB|P0A5U4 [details] [associations]
symbol:recA "Protein RecA" species:1773 "Mycobacterium
tuberculosis" [GO:0000150 "recombinase activity" evidence=IDA]
[GO:0000287 "magnesium ion binding" evidence=IDA] [GO:0000725
"recombinational repair" evidence=IMP] [GO:0003697 "single-stranded
DNA binding" evidence=IDA] [GO:0004520 "endodeoxyribonuclease
activity" evidence=IDA] [GO:0005524 "ATP binding" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006200 "ATP catabolic
process" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=IGI;IEP] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IDA] [GO:0009650 "UV protection" evidence=IMP]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0030145 "manganese
ion binding" evidence=IDA] [GO:0042148 "strand invasion"
evidence=IDA] [GO:0046677 "response to antibiotic" evidence=IEP]
HAMAP:MF_00268 InterPro:IPR003593 InterPro:IPR004042
InterPro:IPR006141 InterPro:IPR006142 InterPro:IPR013765
InterPro:IPR020584 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PRINTS:PR00379 PROSITE:PS00321
PROSITE:PS50162 PROSITE:PS50163 PROSITE:PS50817 PROSITE:PS50818
PROSITE:PS50819 SMART:SM00382 GO:GO:0005829 GO:GO:0005524
EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
EMBL:BX842580 GO:GO:0000287 GO:GO:0046677 GO:GO:0030145
GO:GO:0003697 GO:GO:0006314 GO:GO:0004520 GO:GO:0009650
GO:GO:0008094 GO:GO:0009432 GO:GO:0000725 InterPro:IPR003586
InterPro:IPR003587 SMART:SM00305 SMART:SM00306 GO:GO:0016539
GO:GO:0000150 TIGRFAMs:TIGR01443 TIGRFAMs:TIGR01445 GO:GO:0042148
KO:K03553 Gene3D:3.30.250.10 InterPro:IPR023400
PANTHER:PTHR22942:SF1 SUPFAM:SSF54752 TIGRFAMs:TIGR02012
EMBL:X58485 EMBL:AJ000012 EMBL:AJ000011 PIR:S18206
RefSeq:NP_217253.1 RefSeq:NP_337313.1 RefSeq:YP_006516181.1
PDB:1G18 PDB:1G19 PDB:1MO3 PDB:1MO4 PDB:1MO5 PDB:1MO6 PDB:2IMZ
PDB:2IN0 PDB:2IN8 PDB:2IN9 PDB:2L8L PDB:3IFJ PDB:3IGD PDBsum:1G18
PDBsum:1G19 PDBsum:1MO3 PDBsum:1MO4 PDBsum:1MO5 PDBsum:1MO6
PDBsum:2IMZ PDBsum:2IN0 PDBsum:2IN8 PDBsum:2IN9 PDBsum:2L8L
PDBsum:3IFJ PDBsum:3IGD ProteinModelPortal:P0A5U4 SMR:P0A5U4
MEROPS:N10.009 PRIDE:P0A5U4 EnsemblBacteria:EBMYCT00000000048
EnsemblBacteria:EBMYCT00000072309 GeneID:13319464 GeneID:888371
GeneID:925483 KEGG:mtc:MT2806 KEGG:mtu:Rv2737c KEGG:mtv:RVBD_2737c
PATRIC:18127918 TubercuList:Rv2737c eggNOG:COG1372
ProtClustDB:PRK09519 BindingDB:P0A5U4 ChEMBL:CHEMBL1741171
EvolutionaryTrace:P0A5U4 Uniprot:P0A5U4
Length = 790
Score = 551 (199.0 bits), Expect = 3.9e-53, P = 3.9e-53
Identities = 109/191 (57%), Positives = 141/191 (73%)
Query: 65 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 124
++ AL+ A+ QI S+GKGS+M LG + + V+ TGS ALD+ALG GGLP+GRV+EI
Sbjct: 7 REKALELAVAQIEKSYGKGSVMRLGDEAR-QPISVIPTGSIALDVALGIGGLPRGRVIEI 65
Query: 125 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 184
YGPE+SGKTT+ALH +A AQ GG FIDAEHALDP A+ +GV T++LL++QPD GEQ
Sbjct: 66 YGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQPDTGEQ 125
Query: 185 ALSLVDTLIRSGXXXXXXXXXXXXLVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 244
AL + D LIRSG LVP+ EL+GEMGD+H+ +QARLMSQALRK++ +L+
Sbjct: 126 ALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMTGALNN 185
Query: 245 SQTILIFINQV 255
S T IFINQ+
Sbjct: 186 SGTTAIFINQL 196
>TIGR_CMR|NSE_0530 [details] [associations]
symbol:NSE_0530 "recA protein" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0003677 "DNA binding"
evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS] [GO:0006310
"DNA recombination" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS] [GO:0009432 "SOS response" evidence=ISS]
HAMAP:MF_00268 InterPro:IPR003593 InterPro:IPR013765
InterPro:IPR020584 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0005737
GO:GO:0003684 GO:GO:0006281 GO:GO:0006310 GO:GO:0003697
EMBL:CP000237 GenomeReviews:CP000237_GR GO:GO:0008094 GO:GO:0009432
eggNOG:COG0468 HOGENOM:HOG000264120 KO:K03553 Gene3D:3.30.250.10
InterPro:IPR023400 PANTHER:PTHR22942:SF1 SUPFAM:SSF54752
TIGRFAMs:TIGR02012 ProtClustDB:PRK09354 OMA:TRKGAWY
RefSeq:YP_506414.1 ProteinModelPortal:Q2GDN2 SMR:Q2GDN2
STRING:Q2GDN2 GeneID:3931948 KEGG:nse:NSE_0530 PATRIC:22681109
BioCyc:NSEN222891:GHFU-550-MONOMER Uniprot:Q2GDN2
Length = 327
Score = 549 (198.3 bits), Expect = 4.9e-53, P = 4.9e-53
Identities = 109/194 (56%), Positives = 141/194 (72%)
Query: 62 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 121
M+++D AL+ + QI FGKGSIM + P V +STGS LD ALG GG+PKGR+
Sbjct: 1 MNRED-ALKGVVVQIEKMFGKGSIMTFSQE--PASVECISTGSIGLDSALG-GGIPKGRI 56
Query: 122 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 181
+EI+GPE+SGKTTL LH+IAEAQ+ GG C FIDAEHALDP A +GVK E LL++QPD
Sbjct: 57 IEIFGPESSGKTTLTLHIIAEAQKNGGTCAFIDAEHALDPVYARRLGVKIEELLISQPDT 116
Query: 182 GEQALSLVDTLIRSGXXXXXXXXXXXXLVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 241
GEQAL +VD+LI+SG L PK E++GEMGD H+ +QARL+SQALRK++ S
Sbjct: 117 GEQALEIVDSLIKSGAVDVIVVDSVAALTPKAEIEGEMGDLHVGLQARLLSQALRKITAS 176
Query: 242 LSLSQTILIFINQV 255
+S S +++FINQ+
Sbjct: 177 VSRSNCVVVFINQI 190
>TIGR_CMR|SPO_2034 [details] [associations]
symbol:SPO_2034 "recA protein" species:246200 "Ruegeria
pomeroyi DSS-3" [GO:0003677 "DNA binding" evidence=ISS] [GO:0006281
"DNA repair" evidence=ISS] [GO:0006310 "DNA recombination"
evidence=ISS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISS] [GO:0009432 "SOS response" evidence=ISS]
HAMAP:MF_00268 InterPro:IPR003593 InterPro:IPR013765
InterPro:IPR020584 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0005737
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0006281 GO:GO:0006310
GO:GO:0003697 GO:GO:0008094 GO:GO:0009432 eggNOG:COG0468
HOGENOM:HOG000264120 KO:K03553 OMA:KAFFREH Gene3D:3.30.250.10
InterPro:IPR023400 PANTHER:PTHR22942:SF1 SUPFAM:SSF54752
TIGRFAMs:TIGR02012 ProtClustDB:PRK09354 RefSeq:YP_167265.1
ProteinModelPortal:Q5LRU0 SMR:Q5LRU0 PRIDE:Q5LRU0 GeneID:3193665
KEGG:sil:SPO2034 PATRIC:23377403 Uniprot:Q5LRU0
Length = 347
Score = 549 (198.3 bits), Expect = 4.9e-53, P = 4.9e-53
Identities = 109/191 (57%), Positives = 134/191 (70%)
Query: 65 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 124
K AL AL QI FGKGSIM LG + + STGS LDIALG GGLP GR+VEI
Sbjct: 9 KQKALDSALAQIERQFGKGSIMRLGGENAIQEIEASSTGSLGLDIALGIGGLPMGRIVEI 68
Query: 125 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 184
YGPE+SGKTTL LH IAE Q++GG C F+DAEHALDP A +GV + LL++QPD GEQ
Sbjct: 69 YGPESSGKTTLTLHCIAEQQKRGGVCAFVDAEHALDPQYARKLGVDLDELLISQPDTGEQ 128
Query: 185 ALSLVDTLIRSGXXXXXXXXXXXXLVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 244
AL + DTL+RSG L PK EL+G+MGD+ + + ARLMSQA+RKL+ S+S
Sbjct: 129 ALEITDTLVRSGAVNMVVVDSVAALTPKSELEGDMGDSSVGVHARLMSQAMRKLTGSISR 188
Query: 245 SQTILIFINQV 255
S+ ++IFINQ+
Sbjct: 189 SKCMVIFINQI 199
>UNIPROTKB|P0A7G6 [details] [associations]
symbol:recA species:83333 "Escherichia coli K-12"
[GO:0003697 "single-stranded DNA binding" evidence=IEA;IDA]
[GO:0048870 "cell motility" evidence=IMP] [GO:0006974 "response to
DNA damage stimulus" evidence=IEA;IEP] [GO:0009432 "SOS response"
evidence=IEA;IMP] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0006259 "DNA metabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] HAMAP:MF_00268 InterPro:IPR003593
InterPro:IPR013765 InterPro:IPR020584 InterPro:IPR020587
InterPro:IPR020588 Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006281 GO:GO:0006974 GO:GO:0006310
GO:GO:0003697 GO:GO:0048870 GO:GO:0008094 GO:GO:0009432
eggNOG:COG0468 EMBL:V00328 HOGENOM:HOG000264120 KO:K03553
Gene3D:3.30.250.10 InterPro:IPR023400 PANTHER:PTHR22942:SF1
SUPFAM:SSF54752 TIGRFAMs:TIGR02012 ProtClustDB:PRK09354 OMA:TRKGAWY
PIR:G65049 RefSeq:NP_417179.1 RefSeq:YP_490908.1 PDB:1AA3 PDB:1N03
PDB:1REA PDB:1U94 PDB:1U98 PDB:1U99 PDB:1XMS PDB:1XMV PDB:2REB
PDB:2REC PDB:3CMT PDB:3CMU PDB:3CMV PDB:3CMW PDB:3CMX PDBsum:1AA3
PDBsum:1N03 PDBsum:1REA PDBsum:1U94 PDBsum:1U98 PDBsum:1U99
PDBsum:1XMS PDBsum:1XMV PDBsum:2REB PDBsum:2REC PDBsum:3CMT
PDBsum:3CMU PDBsum:3CMV PDBsum:3CMW PDBsum:3CMX
ProteinModelPortal:P0A7G6 SMR:P0A7G6 DIP:DIP-31832N IntAct:P0A7G6
MINT:MINT-1300726 SWISS-2DPAGE:P0A7G6 PaxDb:P0A7G6 PRIDE:P0A7G6
EnsemblBacteria:EBESCT00000004487 EnsemblBacteria:EBESCT00000004488
EnsemblBacteria:EBESCT00000017937 GeneID:12930224 GeneID:947170
KEGG:ecj:Y75_p2637 KEGG:eco:b2699 PATRIC:32120796 EchoBASE:EB0816
EcoGene:EG10823 BioCyc:EcoCyc:EG10823-MONOMER
BioCyc:ECOL316407:JW2669-MONOMER ChEMBL:CHEMBL3434
EvolutionaryTrace:P0A7G6 Genevestigator:P0A7G6 Uniprot:P0A7G6
Length = 353
Score = 547 (197.6 bits), Expect = 8.0e-53, P = 8.0e-53
Identities = 114/197 (57%), Positives = 136/197 (69%)
Query: 59 EENMSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPK 118
+EN K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP
Sbjct: 4 DENKQK---ALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPM 59
Query: 119 GRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQ 178
GR+VEIYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A +GV +NLL +Q
Sbjct: 60 GRIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYARKLGVDIDNLLCSQ 119
Query: 179 PDCGEQALSLVDTLIRSGXXXXXXXXXXXXLVPKGELDGEMGDAHMAMQARLMSQALRKL 238
PD GEQAL + D L RSG L PK E++GE+GD+HM + AR+MSQA+RKL
Sbjct: 120 PDTGEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKL 179
Query: 239 SHSLSLSQTILIFINQV 255
+ +L S T+LIFINQ+
Sbjct: 180 AGNLKQSNTLLIFINQI 196
>DICTYBASE|DDB_G0276073 [details] [associations]
symbol:recA "recombinase A" species:44689
"Dictyostelium discoideum" [GO:0006281 "DNA repair"
evidence=IEA;IGI] [GO:0005739 "mitochondrion" evidence=IEA;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009432 "SOS response" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0006259 "DNA metabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
InterPro:IPR003593 InterPro:IPR013765 InterPro:IPR020584
InterPro:IPR020587 InterPro:IPR020588 Pfam:PF00154 PRINTS:PR00142
PROSITE:PS00321 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382
dictyBase:DDB_G0276073 GO:GO:0005739 GO:GO:0005524 GO:GO:0006281
EMBL:AAFI02000014 GenomeReviews:CM000151_GR GO:GO:0006310
GO:GO:0003697 GO:GO:0008094 GO:GO:0009432 eggNOG:COG0468
Gene3D:3.30.250.10 InterPro:IPR023400 PANTHER:PTHR22942:SF1
SUPFAM:SSF54752 TIGRFAMs:TIGR02012 EMBL:BR000215 RefSeq:XP_643316.1
HSSP:P0A7G6 ProteinModelPortal:Q75JL2 SMR:Q75JL2 STRING:Q75JL2
EnsemblProtists:DDB0231571 GeneID:8620362 KEGG:ddi:DDB_G0276073
OMA:IRRTEWI Uniprot:Q75JL2
Length = 452
Score = 546 (197.3 bits), Expect = 1.0e-52, P = 1.0e-52
Identities = 107/193 (55%), Positives = 139/193 (72%)
Query: 63 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVV 122
S +++ L ++ SFGKG++M LG + + V V+ +GS LDIALG GGLPKGRV
Sbjct: 84 SASSSSMENVLKELEKSFGKGTLMKLGSQFSTQKVEVIPSGSMGLDIALGVGGLPKGRVT 143
Query: 123 EIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCG 182
EI+GPE+SGKTTLALHVIA+AQ+ GG C FIDAEHAL+P A +GV + L ++QPD G
Sbjct: 144 EIFGPESSGKTTLALHVIAQAQKAGGNCTFIDAEHALNPQWAARLGVNLDELFVSQPDNG 203
Query: 183 EQALSLVDTLIRSGXXXXXXXXXXXXLVPKGELDGEMGDAHMAMQARLMSQALRKLSHSL 242
EQAL +VD+L+RS LVP+ E++GEMGD+H+ +QARLMSQALRKLS +L
Sbjct: 204 EQALEIVDSLLRSKTMSVIVVDSVAALVPRVEIEGEMGDSHLGVQARLMSQALRKLSPTL 263
Query: 243 SLSQTILIFINQV 255
S +LIFINQ+
Sbjct: 264 KDSNCVLIFINQI 276
>TIGR_CMR|SO_3430 [details] [associations]
symbol:SO_3430 "recA protein" species:211586 "Shewanella
oneidensis MR-1" [GO:0006310 "DNA recombination" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0009432 "SOS response" evidence=ISS] HAMAP:MF_00268
InterPro:IPR003593 InterPro:IPR013765 InterPro:IPR020584
InterPro:IPR020587 InterPro:IPR020588 Pfam:PF00154 PRINTS:PR00142
PROSITE:PS00321 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0006281 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0006310 GO:GO:0003697 GO:GO:0008094
GO:GO:0009432 eggNOG:COG0468 HOGENOM:HOG000264120 KO:K03553
Gene3D:3.30.250.10 InterPro:IPR023400 PANTHER:PTHR22942:SF1
SUPFAM:SSF54752 TIGRFAMs:TIGR02012 ProtClustDB:PRK09354 OMA:MLIFINQ
RefSeq:NP_718983.1 ProteinModelPortal:Q8EBS0 GeneID:1171105
KEGG:son:SO_3430 PATRIC:23526548 Uniprot:Q8EBS0
Length = 357
Score = 545 (196.9 bits), Expect = 1.3e-52, P = 1.3e-52
Identities = 110/191 (57%), Positives = 134/191 (70%)
Query: 65 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 124
K+ AL L QI FGKGSIM LG + V +STGS +LD+ALG GGLP GR+VEI
Sbjct: 7 KEKALAAVLSQIEKQFGKGSIMKLGEDRS-MDVETISTGSLSLDVALGAGGLPMGRIVEI 65
Query: 125 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 184
YGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A+ +GV +NLL +QPD GEQ
Sbjct: 66 YGPESSGKTTLTLEVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGEQ 125
Query: 185 ALSLVDTLIRSGXXXXXXXXXXXXLVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 244
AL + D L RSG L PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 126 ALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLKQ 185
Query: 245 SQTILIFINQV 255
S T+LIFINQ+
Sbjct: 186 SNTLLIFINQI 196
>TAIR|locus:2103131 [details] [associations]
symbol:AT3G32920 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003697 "single-stranded DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0006259 "DNA metabolic
process" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA;ISS]
[GO:0006310 "DNA recombination" evidence=ISS] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA;ISS] [GO:0009432 "SOS
response" evidence=IEA;ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR013765
InterPro:IPR020587 InterPro:IPR020588 Pfam:PF00154 PRINTS:PR00142
PROSITE:PS00321 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0006281 GO:GO:0006310 GO:GO:0003697 GO:GO:0008094
GO:GO:0009432 eggNOG:COG0468 KO:K03553 PANTHER:PTHR22942:SF1
EMBL:AP002067 IPI:IPI00528929 RefSeq:NP_189781.4 UniGene:At.53642
ProteinModelPortal:Q3EAS6 SMR:Q3EAS6 GeneID:823055
KEGG:ath:AT3G32920 TAIR:At3g32920 HOGENOM:HOG000034536 OMA:SGRELEW
ArrayExpress:Q3EAS6 Genevestigator:Q3EAS6 GermOnline:AT3G32920
Uniprot:Q3EAS6
Length = 226
Score = 539 (194.8 bits), Expect = 5.6e-52, P = 5.6e-52
Identities = 116/170 (68%), Positives = 131/170 (77%)
Query: 86 MWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTTLALHVIAEAQR 145
M+L R+V+PR+VPV STGSFALD+ALG GGLPKGR+VEIYGPEASGKT LALH+++
Sbjct: 1 MYLSRAVSPRNVPVFSTGSFALDVALGVGGLPKGRLVEIYGPEASGKTALALHMLSML-- 58
Query: 146 QGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSLVDTLIRSGXXXXXXXXX 205
L SLA+ IGV TENLLL+QPDCG+QALSLVDTLI+SG
Sbjct: 59 -------------LIRSLAKAIGVNTENLLLSQPDCGKQALSLVDTLIQSGSVDVIVVDS 105
Query: 206 XXXLVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFINQV 255
LVPKGELDGEMGDAHMA+QARLMSQALRK SHSL LSQT+LIFINQV
Sbjct: 106 VAALVPKGELDGEMGDAHMAIQARLMSQALRKFSHSLLLSQTLLIFINQV 155
>UNIPROTKB|P45383 [details] [associations]
symbol:recA "Protein RecA" species:243277 "Vibrio cholerae
O1 biovar El Tor str. N16961" [GO:0006281 "DNA repair"
evidence=IMP] [GO:0006310 "DNA recombination" evidence=IMP]
HAMAP:MF_00268 InterPro:IPR003593 InterPro:IPR013765
InterPro:IPR020584 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0005737
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0006281 GO:GO:0006310
GO:GO:0003697 GO:GO:0008094 GO:GO:0009432 eggNOG:COG0468 KO:K03553
Gene3D:3.30.250.10 InterPro:IPR023400 PANTHER:PTHR22942:SF1
SUPFAM:SSF54752 TIGRFAMs:TIGR02012 ProtClustDB:PRK09354 OMA:MLIFINQ
EMBL:X71969 EMBL:U10162 EMBL:L42384 PIR:E82310 PIR:S46274
RefSeq:NP_230194.1 ProteinModelPortal:P45383 SMR:P45383
PRIDE:P45383 DNASU:2615212 GeneID:2615212 KEGG:vch:VC0543
PATRIC:20080190 Uniprot:P45383
Length = 354
Score = 532 (192.3 bits), Expect = 3.1e-51, P = 3.1e-51
Identities = 110/197 (55%), Positives = 136/197 (69%)
Query: 59 EENMSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPK 118
+EN K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP
Sbjct: 2 DENKQK---ALAAALGQIEKQFGKGSIMRLGDN-RAMDVETISTGSLSLDIALGAGGLPM 57
Query: 119 GRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQ 178
GR+VEI+GPE+SGKTTL L +IA AQR+G C FIDAEHALDP A+ +GV + LL++Q
Sbjct: 58 GRIVEIFGPESSGKTTLTLELIAAAQREGKTCAFIDAEHALDPVYAKKLGVNIDELLVSQ 117
Query: 179 PDCGEQALSLVDTLIRSGXXXXXXXXXXXXLVPKGELDGEMGDAHMAMQARLMSQALRKL 238
PD GEQAL + D L RSG L PK E++GEMGD+HM +QAR++SQA+RKL
Sbjct: 118 PDTGEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEMGDSHMGLQARMLSQAMRKL 177
Query: 239 SHSLSLSQTILIFINQV 255
+ +L S + IFINQ+
Sbjct: 178 TGNLKQSNCMCIFINQI 194
>TIGR_CMR|VC_0543 [details] [associations]
symbol:VC_0543 "recA protein" species:686 "Vibrio cholerae
O1 biovar El Tor" [GO:0003677 "DNA binding" evidence=ISS]
[GO:0006281 "DNA repair" evidence=IMP] [GO:0006310 "DNA
recombination" evidence=IMP] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS] [GO:0009432 "SOS response" evidence=ISS]
HAMAP:MF_00268 InterPro:IPR003593 InterPro:IPR013765
InterPro:IPR020584 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0005737
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0006281 GO:GO:0006310
GO:GO:0003697 GO:GO:0008094 GO:GO:0009432 eggNOG:COG0468 KO:K03553
Gene3D:3.30.250.10 InterPro:IPR023400 PANTHER:PTHR22942:SF1
SUPFAM:SSF54752 TIGRFAMs:TIGR02012 ProtClustDB:PRK09354 OMA:MLIFINQ
EMBL:X71969 EMBL:U10162 EMBL:L42384 PIR:E82310 PIR:S46274
RefSeq:NP_230194.1 ProteinModelPortal:P45383 SMR:P45383
PRIDE:P45383 DNASU:2615212 GeneID:2615212 KEGG:vch:VC0543
PATRIC:20080190 Uniprot:P45383
Length = 354
Score = 532 (192.3 bits), Expect = 3.1e-51, P = 3.1e-51
Identities = 110/197 (55%), Positives = 136/197 (69%)
Query: 59 EENMSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPK 118
+EN K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP
Sbjct: 2 DENKQK---ALAAALGQIEKQFGKGSIMRLGDN-RAMDVETISTGSLSLDIALGAGGLPM 57
Query: 119 GRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQ 178
GR+VEI+GPE+SGKTTL L +IA AQR+G C FIDAEHALDP A+ +GV + LL++Q
Sbjct: 58 GRIVEIFGPESSGKTTLTLELIAAAQREGKTCAFIDAEHALDPVYAKKLGVNIDELLVSQ 117
Query: 179 PDCGEQALSLVDTLIRSGXXXXXXXXXXXXLVPKGELDGEMGDAHMAMQARLMSQALRKL 238
PD GEQAL + D L RSG L PK E++GEMGD+HM +QAR++SQA+RKL
Sbjct: 118 PDTGEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEMGDSHMGLQARMLSQAMRKL 177
Query: 239 SHSLSLSQTILIFINQV 255
+ +L S + IFINQ+
Sbjct: 178 TGNLKQSNCMCIFINQI 194
>TIGR_CMR|APH_1354 [details] [associations]
symbol:APH_1354 "recA protein" species:212042 "Anaplasma
phagocytophilum HZ" [GO:0003677 "DNA binding" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] [GO:0006310 "DNA
recombination" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS] [GO:0009432 "SOS response" evidence=ISS]
HAMAP:MF_00268 InterPro:IPR003593 InterPro:IPR013765
InterPro:IPR020584 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0005737
GO:GO:0003684 GO:GO:0006281 GO:GO:0006310 GO:GO:0003697
EMBL:CP000235 GenomeReviews:CP000235_GR GO:GO:0008094 GO:GO:0009432
eggNOG:COG0468 HOGENOM:HOG000264120 KO:K03553 Gene3D:3.30.250.10
InterPro:IPR023400 PANTHER:PTHR22942:SF1 SUPFAM:SSF54752
TIGRFAMs:TIGR02012 OMA:IRRTEWI ProtClustDB:PRK09354
RefSeq:YP_505854.1 ProteinModelPortal:Q2GIE7 SMR:Q2GIE7
STRING:Q2GIE7 GeneID:3931040 KEGG:aph:APH_1354 PATRIC:20951508
BioCyc:APHA212042:GHPM-1354-MONOMER Uniprot:Q2GIE7
Length = 354
Score = 526 (190.2 bits), Expect = 1.3e-50, P = 1.3e-50
Identities = 105/197 (53%), Positives = 138/197 (70%)
Query: 59 EENMSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPK 118
+++ S K A+ A+ QI +FG+GSIM L S V VSTGS ALD ALG GGLP+
Sbjct: 2 KDSPSDKQRAVDAAIGQIERAFGRGSIMRLQNSPVEA-VECVSTGSIALDAALGVGGLPR 60
Query: 119 GRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQ 178
GR++EI+GPE+SGKTTLALHVIAEAQ+ GG C FIDAEHALD A +GV +L+++Q
Sbjct: 61 GRIIEIFGPESSGKTTLALHVIAEAQKNGGACAFIDAEHALDTLYARKLGVSVGDLIVSQ 120
Query: 179 PDCGEQALSLVDTLIRSGXXXXXXXXXXXXLVPKGELDGEMGDAHMAMQARLMSQALRKL 238
PD GEQAL +V+ L+ SG L P+ E++G+MGD HM +QARL+S ALRKL
Sbjct: 121 PDTGEQALHIVEHLVNSGAVDVIVVDSVAALTPRAEIEGDMGDQHMGLQARLLSHALRKL 180
Query: 239 SHSLSLSQTILIFINQV 255
+ +S + +L+FINQ+
Sbjct: 181 TSIVSKANCLLVFINQI 197
>TAIR|locus:2100038 [details] [associations]
symbol:RECA3 "RECA homolog 3" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003697
"single-stranded DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISM]
[GO:0006259 "DNA metabolic process" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA;ISS] [GO:0006310 "DNA recombination"
evidence=ISS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA;ISS] [GO:0009432 "SOS response" evidence=IEA;ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0000002 "mitochondrial genome maintenance" evidence=IGI]
[GO:0009408 "response to heat" evidence=IGI] InterPro:IPR003593
InterPro:IPR013765 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005739 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006281 GO:GO:0009408
GO:GO:0006310 GO:GO:0003697 GO:GO:0000002 GO:GO:0008094
GO:GO:0009432 eggNOG:COG0468 EMBL:AC010927 UniGene:At.39982
UniGene:At.48640 HOGENOM:HOG000264120 Gene3D:3.30.250.10
InterPro:IPR023400 PANTHER:PTHR22942:SF1 SUPFAM:SSF54752
TIGRFAMs:TIGR02012 EMBL:AY072877 EMBL:AY136400 EMBL:BT000214
IPI:IPI00542438 RefSeq:NP_187625.2 ProteinModelPortal:Q8RY99
SMR:Q8RY99 IntAct:Q8RY99 PRIDE:Q8RY99 EnsemblPlants:AT3G10140.1
GeneID:820177 KEGG:ath:AT3G10140 GeneFarm:2673 TAIR:At3g10140
InParanoid:Q8RY99 OMA:CRSETLI PhylomeDB:Q8RY99
ProtClustDB:CLSN2722126 Genevestigator:Q8RY99 GermOnline:AT3G10140
Uniprot:Q8RY99
Length = 389
Score = 524 (189.5 bits), Expect = 2.2e-50, P = 2.2e-50
Identities = 102/199 (51%), Positives = 141/199 (70%)
Query: 59 EENMSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPK 118
+ +++KD AL AL Q++ F K S + L R R V V+STGS LD+ALG GGLPK
Sbjct: 56 DRKVAEKDTALHLALSQLSGDFDKDSKLSLQRFYRKRRVSVISTGSLNLDLALGVGGLPK 115
Query: 119 GRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQ 178
GR+VE+YG EASGKTTLALH+I EAQ+ GGYC ++DAE+A+DPSLAE+IGV TE LL+++
Sbjct: 116 GRMVEVYGKEASGKTTLALHIIKEAQKLGGYCAYLDAENAMDPSLAESIGVNTEELLISR 175
Query: 179 PDCGEQALSLVDTLIRSGXXXXXXXXXXXXLVPKGELDGEMGDAHMAMQARLMSQALRKL 238
P E+ L++VD L +SG L P+ ELD +G+ + Q+R+M+QALRK+
Sbjct: 176 PSSAEKMLNIVDVLTKSGSVDVIVVDSVAALAPQCELDAPVGERYRDTQSRIMTQALRKI 235
Query: 239 SHSLSLSQTILIFINQVFS 257
+S+ SQT+++F+NQV S
Sbjct: 236 HYSVGYSQTLIVFLNQVRS 254
>TIGR_CMR|ECH_1109 [details] [associations]
symbol:ECH_1109 "recA protein" species:205920 "Ehrlichia
chaffeensis str. Arkansas" [GO:0003677 "DNA binding" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] [GO:0006310 "DNA
recombination" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS] [GO:0009432 "SOS response" evidence=ISS]
HAMAP:MF_00268 InterPro:IPR003593 InterPro:IPR013765
InterPro:IPR020584 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0005737
EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0006281 GO:GO:0006310
GO:GO:0003697 GO:GO:0008094 GO:GO:0009432 eggNOG:COG0468
HOGENOM:HOG000264120 KO:K03553 Gene3D:3.30.250.10
InterPro:IPR023400 PANTHER:PTHR22942:SF1 SUPFAM:SSF54752
TIGRFAMs:TIGR02012 ProtClustDB:PRK09354 OMA:TRKGAWY
RefSeq:YP_507893.1 ProteinModelPortal:Q2GF90 SMR:Q2GF90
STRING:Q2GF90 GeneID:3927794 KEGG:ech:ECH_1109 PATRIC:20577554
BioCyc:ECHA205920:GJNR-1112-MONOMER Uniprot:Q2GF90
Length = 357
Score = 521 (188.5 bits), Expect = 4.6e-50, P = 4.6e-50
Identities = 103/197 (52%), Positives = 141/197 (71%)
Query: 60 ENMSK-KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPK 118
+N+++ + AL A+ QI +FG+G+IM L + + + +STGS ALD ALG GG PK
Sbjct: 5 KNLNQERQKALDSAISQIEKAFGRGAIMKLKQGAIEK-IDSISTGSIALDTALGIGGFPK 63
Query: 119 GRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQ 178
GR+VEI+GPE+SGKTTLALHVIAE+Q++GG C FIDAEHALD A +GV T +L+++Q
Sbjct: 64 GRIVEIFGPESSGKTTLALHVIAESQKKGGNCAFIDAEHALDIMYARKLGVNTGDLIVSQ 123
Query: 179 PDCGEQALSLVDTLIRSGXXXXXXXXXXXXLVPKGELDGEMGDAHMAMQARLMSQALRKL 238
PD GEQAL +V+ L+ SG L P+ E++G+MGD HM +QARL+S ALRKL
Sbjct: 124 PDTGEQALHIVEYLVCSGAIDVIVVDSVAALTPRAEIEGDMGDQHMGLQARLLSHALRKL 183
Query: 239 SHSLSLSQTILIFINQV 255
+ +S + +LIFINQ+
Sbjct: 184 TSIVSKANCVLIFINQI 200
>TIGR_CMR|CJE_1845 [details] [associations]
symbol:CJE_1845 "recA protein" species:195099
"Campylobacter jejuni RM1221" [GO:0003677 "DNA binding"
evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS] [GO:0006310
"DNA recombination" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS] [GO:0009432 "SOS response" evidence=ISS]
HAMAP:MF_00268 InterPro:IPR003593 InterPro:IPR013765
InterPro:IPR020584 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0005737
GO:GO:0006281 EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0006310
GO:GO:0003697 GO:GO:0008094 GO:GO:0009432 eggNOG:COG0468
HOGENOM:HOG000264120 KO:K03553 Gene3D:3.30.250.10
InterPro:IPR023400 PANTHER:PTHR22942:SF1 SUPFAM:SSF54752
TIGRFAMs:TIGR02012 ProtClustDB:PRK09354 RefSeq:YP_179815.1
ProteinModelPortal:Q5HSC0 SMR:Q5HSC0 STRING:Q5HSC0 GeneID:3232472
KEGG:cjr:CJE1845 PATRIC:20045522 OMA:TRKGAWY
BioCyc:CJEJ195099:GJC0-1884-MONOMER Uniprot:Q5HSC0
Length = 343
Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
Identities = 100/191 (52%), Positives = 133/191 (69%)
Query: 65 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 124
K +L AL + +FGKG+I+ LG + + + TGS LD+ALG GG+PKGR++EI
Sbjct: 5 KRKSLDAALKSLDKTFGKGTILRLGDKEVEQ-IDSIGTGSVGLDLALGIGGVPKGRIIEI 63
Query: 125 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 184
YGPE+SGKTTL LH+IAE Q+ GG C FIDAEHALD A+ +GV T++L ++QPD GEQ
Sbjct: 64 YGPESSGKTTLTLHIIAECQKAGGVCAFIDAEHALDVKYAKNLGVNTDDLYVSQPDFGEQ 123
Query: 185 ALSLVDTLIRSGXXXXXXXXXXXXLVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 244
AL +V+T+ RSG L PK E++G+MGD H+ +QARLMSQALRKL+ +
Sbjct: 124 ALEIVETIARSGAVDLIVVDSVAALTPKAEIEGDMGDQHVGLQARLMSQALRKLTGIVHK 183
Query: 245 SQTILIFINQV 255
T +IFINQ+
Sbjct: 184 MNTTVIFINQI 194
>TIGR_CMR|DET_1606 [details] [associations]
symbol:DET_1606 "recA protein" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003677 "DNA binding"
evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS] [GO:0006310
"DNA recombination" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS] HAMAP:MF_00268 InterPro:IPR003593
InterPro:IPR013765 InterPro:IPR020584 InterPro:IPR020587
InterPro:IPR020588 Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0003684 GO:GO:0006281 GO:GO:0006310
GO:GO:0003697 EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0008094
GO:GO:0009432 eggNOG:COG0468 HOGENOM:HOG000264120 KO:K03553
Gene3D:3.30.250.10 InterPro:IPR023400 PANTHER:PTHR22942:SF1
SUPFAM:SSF54752 TIGRFAMs:TIGR02012 ProtClustDB:PRK09354 OMA:TRKGAWY
RefSeq:YP_182301.1 ProteinModelPortal:Q3Z648 SMR:Q3Z648
STRING:Q3Z648 GeneID:3229079 KEGG:det:DET1606 PATRIC:21610224
BioCyc:DETH243164:GJNF-1607-MONOMER Uniprot:Q3Z648
Length = 337
Score = 501 (181.4 bits), Expect = 6.0e-48, P = 6.0e-48
Identities = 99/193 (51%), Positives = 132/193 (68%)
Query: 63 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVV 122
++KD AL+ + I FGKGSIM L + V + T S ALDIALG GG+P+GR+
Sbjct: 3 TEKDKALELTVGIIEKRFGKGSIMKLSDPTFRQTVEFIPTSSLALDIALGVGGIPRGRIS 62
Query: 123 EIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCG 182
EI+GPE SGKTTLA H+IA+AQ+ G +ID EHALDP A T GV + LL++QPD G
Sbjct: 63 EIFGPEGSGKTTLAQHIIAQAQKMGEKAAYIDVEHALDPKYASTCGVNLDELLISQPDTG 122
Query: 183 EQALSLVDTLIRSGXXXXXXXXXXXXLVPKGELDGEMGDAHMAMQARLMSQALRKLSHSL 242
E+AL + + L+RS LVPK E++G+MGD+H+ +QARLMSQALRKL+ S+
Sbjct: 123 EEALGIAEELVRSTAIGVIVIDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKLTASI 182
Query: 243 SLSQTILIFINQV 255
++T +IFINQ+
Sbjct: 183 GQTRTAVIFINQL 195
>TAIR|locus:2207445 [details] [associations]
symbol:RECA1 "homolog of bacterial RecA" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003697 "single-stranded DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=ISS]
[GO:0006310 "DNA recombination" evidence=ISS] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA;ISS] [GO:0009432 "SOS
response" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0009691 "cytokinin biosynthetic
process" evidence=RCA] [GO:0006974 "response to DNA damage
stimulus" evidence=IMP] InterPro:IPR003593 InterPro:IPR013765
InterPro:IPR020584 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 EMBL:CP002684 GO:GO:0005524
GO:GO:0009570 GO:GO:0006281 GO:GO:0006974 UniGene:At.23809
GO:GO:0006310 GO:GO:0003697 GO:GO:0008094 GO:GO:0009432
eggNOG:COG0468 EMBL:AC002986 UniGene:At.317 KO:K03553
Gene3D:3.30.250.10 InterPro:IPR023400 PANTHER:PTHR22942:SF1
SUPFAM:SSF54752 TIGRFAMs:TIGR02012 EMBL:L15229 EMBL:AY050885
EMBL:AY113960 EMBL:M98039 IPI:IPI00533410 PIR:A46259 PIR:T01050
RefSeq:NP_565198.1 ProteinModelPortal:Q39199 SMR:Q39199
STRING:Q39199 PaxDb:Q39199 PRIDE:Q39199 EnsemblPlants:AT1G79050.1
GeneID:844246 KEGG:ath:AT1G79050 GeneFarm:2669 TAIR:At1g79050
InParanoid:Q39199 OMA:KIREQVA PhylomeDB:Q39199
Genevestigator:Q39199 GermOnline:AT1G79050 Uniprot:Q39199
Length = 439
Score = 480 (174.0 bits), Expect = 1.0e-45, P = 1.0e-45
Identities = 100/188 (53%), Positives = 127/188 (67%)
Query: 68 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 127
AL+ A++ I SSFGKGS+ LG S V S+G LD+ALG GGLPKGRVVEIYGP
Sbjct: 86 ALEAAMNDINSSFGKGSVTRLG-SAGGALVETFSSGILTLDLALG-GGLPKGRVVEIYGP 143
Query: 128 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 187
E+SGKTTLALH IAE Q+ GG + +DAEHA DP+ ++ +GV ENL++ QPD GE AL
Sbjct: 144 ESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENLIVCQPDNGEMALE 203
Query: 188 LVDTLIRSGXXXXXXXXXXXXLVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 247
D + RSG L P+ E++GE+G M +QARLMSQALRK+S + S +
Sbjct: 204 TADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGC 263
Query: 248 ILIFINQV 255
LIF+NQ+
Sbjct: 264 TLIFLNQI 271
>UNIPROTKB|P78014 [details] [associations]
symbol:recA "Protein RecA" species:272634 "Mycoplasma
pneumoniae M129" [GO:0005515 "protein binding" evidence=IPI]
HAMAP:MF_00268 InterPro:IPR003593 InterPro:IPR013765
InterPro:IPR020584 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0005737
GO:GO:0006281 GO:GO:0006310 GO:GO:0003697 GO:GO:0008094 EMBL:U00089
GenomeReviews:U00089_GR GO:GO:0009432 eggNOG:COG0468 KO:K03553
Gene3D:3.30.250.10 InterPro:IPR023400 PANTHER:PTHR22942:SF1
SUPFAM:SSF54752 TIGRFAMs:TIGR02012 ProtClustDB:PRK09354 OMA:TRKGAWY
PIR:S73678 RefSeq:NP_110178.1 ProteinModelPortal:P78014
IntAct:P78014 GeneID:877213 KEGG:mpn:MPN490 PATRIC:20022406
BioCyc:MPNE272634:GJ6Z-531-MONOMER Uniprot:P78014
Length = 336
Score = 368 (134.6 bits), Expect = 7.4e-34, P = 7.4e-34
Identities = 76/159 (47%), Positives = 103/159 (64%)
Query: 97 VPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAE 156
+ VSTGS LD ALGTGGLP GR+VE+YG E+SGKTT+ALH +A Q+ G +IDAE
Sbjct: 37 IKTVSTGSLHLDEALGTGGLPLGRIVELYGNESSGKTTVALHAVASFQKAGKVACYIDAE 96
Query: 157 HALDPSLAETIGVKTENLLLAQPDCGEQALSLVDTLIRSGXXXXXXXXXXXXLVPKGELD 216
ALD S A+ IG+ LL+A P GE A +L+++LI++ L+PK EL+
Sbjct: 97 GALDLSYAKAIGIDLGKLLVAHPKHGENAFALMESLIKTNKVALIVVDSVAALIPKQELE 156
Query: 217 GEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFINQV 255
G M D + + AR+MS+ LR++ L S T L+FINQ+
Sbjct: 157 GNMDDQTIGLHARMMSKGLRRVQSLLPESDTCLLFINQL 195
>DICTYBASE|DDB_G0274901 [details] [associations]
symbol:DDB_G0274901 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009432 "SOS response" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0006259 "DNA metabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
InterPro:IPR003593 InterPro:IPR013765 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS50162 SMART:SM00382
dictyBase:DDB_G0274901 GO:GO:0005524 GO:GO:0006281
EMBL:AAFI02000012 GO:GO:0006310 GO:GO:0003697 GO:GO:0008094
GO:GO:0009432 eggNOG:COG0468 PANTHER:PTHR22942:SF1
RefSeq:XP_644118.1 ProteinModelPortal:Q555F1
EnsemblProtists:DDB0217538 GeneID:8619547 KEGG:ddi:DDB_G0274901
Uniprot:Q555F1
Length = 458
Score = 106 (42.4 bits), Expect = 7.2e-08, Sum P(2) = 7.2e-08
Identities = 17/45 (37%), Positives = 32/45 (71%)
Query: 97 VPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTTLALHVIA 141
+P +++G +LD L GGLP ++EIYG ++GK+TL++ +++
Sbjct: 82 IPTITSGITSLDYQLQIGGLPLNHIIEIYGDSSTGKSTLSMFILS 126
Score = 83 (34.3 bits), Expect = 7.2e-08, Sum P(2) = 7.2e-08
Identities = 24/111 (21%), Positives = 52/111 (46%)
Query: 151 VFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSLVDTLIRSGXXXXXXXXXXXXLV 210
++ID+E++ + A IG+ N + QP+ E+A L+ +++ L+
Sbjct: 156 LYIDSENSFNSEWASKIGMNLSNCTVFQPNNSEEAFELIKKSLKNQIFKVIILDSLSSLM 215
Query: 211 PKGELDGEMGDAHMA-MQARLMSQALRKLSHSLSLSQTILIFINQV-FSIN 259
+++ + + H + ++ L ++S+ L S IF NQ+ +S N
Sbjct: 216 SIKDIESNLVENHYQNIGFDWITSNLNEISNLLIDSNCCFIFTNQMRYSFN 266
>UNIPROTKB|Q0MR21 [details] [associations]
symbol:Q0MR21 "DMC1-like protein" species:37727
"Talaromyces marneffei" [GO:0000150 "recombinase activity"
evidence=ISS] [GO:0003690 "double-stranded DNA binding"
evidence=ISS] [GO:0003697 "single-stranded DNA binding"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0006200
"ATP catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011940 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0006281
GO:GO:0016887 GO:GO:0003690 GO:GO:0003697 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 GO:GO:0000150
EMBL:DQ863299 ProteinModelPortal:Q0MR21 Uniprot:Q0MR21
Length = 337
Score = 116 (45.9 bits), Expect = 0.00014, P = 0.00014
Identities = 48/172 (27%), Positives = 75/172 (43%)
Query: 100 VSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTTLA--LHVIAEAQRQ-GG---YCVFI 153
+STGS D LG GG + E+YG GKT L+ + VIA+ ++ GG +I
Sbjct: 98 ISTGSKQFDTILG-GGFQSSSISEVYGEFRCGKTQLSHTMSVIAQLPKEMGGGEGKVAYI 156
Query: 154 DAEHALDPS----LAETIGVKTE----NLLLAQPDCGEQALSLVDTLIRSGXXXXXXXXX 205
D E P +AE G+ E N+ A+ E L L++TL +
Sbjct: 157 DTEGTFRPDRIAQIAERYGLDAESTQENISYARALNSEHQLELLNTLSKEFAGGQYRLLV 216
Query: 206 XXXLVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFINQVFS 257
++ +D G +A + + ++Q L +LSH ++ NQV S
Sbjct: 217 IDSIMNCFRVDFS-GRGELAERQQKLNQFLIRLSHLAEEFNVCVLMTNQVQS 267
>UNIPROTKB|Q9C0P6 [details] [associations]
symbol:dmc1 "Putative DMC1 protein" species:5322 "Pleurotus
ostreatus" [GO:0000150 "recombinase activity" evidence=ISS]
[GO:0003690 "double-stranded DNA binding" evidence=ISS] [GO:0003697
"single-stranded DNA binding" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003583 InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011940 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0006281 GO:GO:0016887
GO:GO:0003690 GO:GO:0003697 GO:GO:0007131 SUPFAM:SSF47794
GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 GO:GO:0000150 HSSP:Q06609
EMBL:AJ311528 EMBL:AJ308557 ProteinModelPortal:Q9C0P6
Uniprot:Q9C0P6
Length = 347
Score = 115 (45.5 bits), Expect = 0.00020, P = 0.00020
Identities = 50/179 (27%), Positives = 81/179 (45%)
Query: 95 RHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTTLA--LHVIAEAQRQ----GG 148
+ V +STGS +D+ LG GG+ V E+YG +GKT LA + V+A+ G
Sbjct: 105 KRVNTISTGSKNVDVILG-GGIMSQSVSEVYGEFRTGKTQLAHTMSVVAQLPPDLGGASG 163
Query: 149 YCVFIDAEHALDP----SLAETIGVK----TENLLLAQPDCGEQALSLVDTL-IRSGXXX 199
+ID E P S+AE GV EN+L A+ E + L++ +R
Sbjct: 164 KVAYIDTEGTFRPDRIRSIAERFGVDGSLALENILYARAFNSEHQMELINECSMRFAEDK 223
Query: 200 XXXXXXXXXLVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFI-NQVFS 257
++ +D G ++ + + ++Q L +L+ LS I + + NQV S
Sbjct: 224 DFRLLIVDSIMALFRVDYS-GRGELSERQQKLAQMLSRLT-KLSEEYNIAVLLTNQVQS 280
>ASPGD|ASPL0000094064 [details] [associations]
symbol:AN11929 species:162425 "Emericella nidulans"
[GO:0032545 "CURI complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0034456 "UTP-C complex" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0000028 "ribosomal small
subunit assembly" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011940 InterPro:IPR012677
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00278 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0006281 Gene3D:3.30.70.330 EMBL:BN001306
GO:GO:0016887 GO:GO:0003690 GO:GO:0003697 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0008094 eggNOG:COG0468 KO:K10872
InterPro:IPR013632 Pfam:PF08423 TIGRFAMs:TIGR02238 GO:GO:0000150
OrthoDB:EOG43XZC8 EMBL:AACD01000169 InterPro:IPR024326 Pfam:PF12923
RefSeq:XP_682361.1 ProteinModelPortal:Q5ARI8 STRING:Q5ARI8
EnsemblFungi:CADANIAT00009522 GeneID:2868034 KEGG:ani:AN9092.2
HOGENOM:HOG000201580 Uniprot:Q5ARI8
Length = 658
Score = 115 (45.5 bits), Expect = 0.00052, P = 0.00052
Identities = 53/203 (26%), Positives = 88/203 (43%)
Query: 69 LQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPE 128
+++A+++ S G I + S + V +STGS D LG GG + E++G
Sbjct: 68 IKEAINKCLPS-ASGFITAMELSHQRKRVVRISTGSKQFDSILG-GGFQSMSISEVFGEF 125
Query: 129 ASGKTTLA--LHVIAEAQRQ-GGY---CVFIDAEHALDPS----LAETIGVKT----ENL 174
GKT L+ + V+A+ + GG +ID E P +AE GV EN+
Sbjct: 126 RCGKTQLSHTMSVVAQLPKDMGGAEGKVAYIDTEGTFRPERIGQIAERFGVDPDSAKENI 185
Query: 175 LLAQPDCGEQALSLVDTLIRSGXXXXXXXXXXXXLVPKGELDGEMGDAHMAMQARLMSQA 234
A+ E L L++TL + ++ +D G +A + + ++Q
Sbjct: 186 AYARALNSEHQLELLNTLSKEFVGGEYRLLIIDSIMNCFRVDF-CGRGELADRQQKLNQF 244
Query: 235 LRKLSHSLSLSQTILIFINQVFS 257
L KL+H ++ NQV S
Sbjct: 245 LMKLAHMAEEFNVCVLMTNQVQS 267
>ASPGD|ASPL0000098803 [details] [associations]
symbol:AN11930 species:162425 "Emericella nidulans"
[GO:0006281 "DNA repair" evidence=IEA] [GO:0000794 "condensed
nuclear chromosome" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000150 "recombinase activity" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0006311 "meiotic gene conversion" evidence=IEA]
[GO:0000709 "meiotic joint molecule formation" evidence=IEA]
[GO:0051260 "protein homooligomerization" evidence=IEA]
InterPro:IPR003583 InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011940 InterPro:IPR012677 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0006281
Gene3D:3.30.70.330 EMBL:BN001306 GO:GO:0016887 GO:GO:0003690
GO:GO:0003697 GO:GO:0007131 SUPFAM:SSF47794 GO:GO:0008094
eggNOG:COG0468 KO:K10872 InterPro:IPR013632 Pfam:PF08423
TIGRFAMs:TIGR02238 GO:GO:0000150 OrthoDB:EOG43XZC8
EMBL:AACD01000169 InterPro:IPR024326 Pfam:PF12923
RefSeq:XP_682361.1 ProteinModelPortal:Q5ARI8 STRING:Q5ARI8
EnsemblFungi:CADANIAT00009522 GeneID:2868034 KEGG:ani:AN9092.2
HOGENOM:HOG000201580 Uniprot:Q5ARI8
Length = 658
Score = 115 (45.5 bits), Expect = 0.00052, P = 0.00052
Identities = 53/203 (26%), Positives = 88/203 (43%)
Query: 69 LQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPE 128
+++A+++ S G I + S + V +STGS D LG GG + E++G
Sbjct: 68 IKEAINKCLPS-ASGFITAMELSHQRKRVVRISTGSKQFDSILG-GGFQSMSISEVFGEF 125
Query: 129 ASGKTTLA--LHVIAEAQRQ-GGY---CVFIDAEHALDPS----LAETIGVKT----ENL 174
GKT L+ + V+A+ + GG +ID E P +AE GV EN+
Sbjct: 126 RCGKTQLSHTMSVVAQLPKDMGGAEGKVAYIDTEGTFRPERIGQIAERFGVDPDSAKENI 185
Query: 175 LLAQPDCGEQALSLVDTLIRSGXXXXXXXXXXXXLVPKGELDGEMGDAHMAMQARLMSQA 234
A+ E L L++TL + ++ +D G +A + + ++Q
Sbjct: 186 AYARALNSEHQLELLNTLSKEFVGGEYRLLIIDSIMNCFRVDF-CGRGELADRQQKLNQF 244
Query: 235 LRKLSHSLSLSQTILIFINQVFS 257
L KL+H ++ NQV S
Sbjct: 245 LMKLAHMAEEFNVCVLMTNQVQS 267
>UNIPROTKB|Q5ARI8 [details] [associations]
symbol:AN9092.2 "Meiotic recombination protein (Dmc1),
putative (AFU_orthologue; AFUA_7G02200)" species:227321
"Aspergillus nidulans FGSC A4" [GO:0000150 "recombinase activity"
evidence=ISS] [GO:0003690 "double-stranded DNA binding"
evidence=ISS] [GO:0003697 "single-stranded DNA binding"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0006200
"ATP catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011940 InterPro:IPR012677
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00278 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0006281 Gene3D:3.30.70.330 EMBL:BN001306
GO:GO:0016887 GO:GO:0003690 GO:GO:0003697 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0008094 eggNOG:COG0468 KO:K10872
InterPro:IPR013632 Pfam:PF08423 TIGRFAMs:TIGR02238 GO:GO:0000150
OrthoDB:EOG43XZC8 EMBL:AACD01000169 InterPro:IPR024326 Pfam:PF12923
RefSeq:XP_682361.1 ProteinModelPortal:Q5ARI8 STRING:Q5ARI8
EnsemblFungi:CADANIAT00009522 GeneID:2868034 KEGG:ani:AN9092.2
HOGENOM:HOG000201580 Uniprot:Q5ARI8
Length = 658
Score = 115 (45.5 bits), Expect = 0.00052, P = 0.00052
Identities = 53/203 (26%), Positives = 88/203 (43%)
Query: 69 LQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPE 128
+++A+++ S G I + S + V +STGS D LG GG + E++G
Sbjct: 68 IKEAINKCLPS-ASGFITAMELSHQRKRVVRISTGSKQFDSILG-GGFQSMSISEVFGEF 125
Query: 129 ASGKTTLA--LHVIAEAQRQ-GGY---CVFIDAEHALDPS----LAETIGVKT----ENL 174
GKT L+ + V+A+ + GG +ID E P +AE GV EN+
Sbjct: 126 RCGKTQLSHTMSVVAQLPKDMGGAEGKVAYIDTEGTFRPERIGQIAERFGVDPDSAKENI 185
Query: 175 LLAQPDCGEQALSLVDTLIRSGXXXXXXXXXXXXLVPKGELDGEMGDAHMAMQARLMSQA 234
A+ E L L++TL + ++ +D G +A + + ++Q
Sbjct: 186 AYARALNSEHQLELLNTLSKEFVGGEYRLLIIDSIMNCFRVDF-CGRGELADRQQKLNQF 244
Query: 235 LRKLSHSLSLSQTILIFINQVFS 257
L KL+H ++ NQV S
Sbjct: 245 LMKLAHMAEEFNVCVLMTNQVQS 267
>UNIPROTKB|Q4WAR2 [details] [associations]
symbol:AFUA_7G02200 "Meiotic recombination protein (Dmc1),
putative" species:330879 "Aspergillus fumigatus Af293" [GO:0000150
"recombinase activity" evidence=ISS] [GO:0003690 "double-stranded
DNA binding" evidence=ISS] [GO:0003697 "single-stranded DNA
binding" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011940 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0003690
GO:GO:0003697 GO:GO:0007131 SUPFAM:SSF47794 GO:GO:0008094
HOGENOM:HOG000227426 KO:K10872 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856
TIGRFAMs:TIGR02238 GO:GO:0000150 OrthoDB:EOG43XZC8
EMBL:AAHF01000015 RefSeq:XP_746712.1 ProteinModelPortal:Q4WAR2
STRING:Q4WAR2 EnsemblFungi:CADAFUAT00001154 GeneID:3504290
KEGG:afm:AFUA_7G02200 OMA:HAASTRI Uniprot:Q4WAR2
Length = 338
Score = 110 (43.8 bits), Expect = 0.00072, P = 0.00072
Identities = 51/203 (25%), Positives = 87/203 (42%)
Query: 69 LQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPE 128
+++A+ + + G I + S + V +STGS D LG GG + E++G
Sbjct: 69 IKEAIQKCLPA-ASGFITAMELSHQRKRVVKISTGSKQFDSILG-GGFQSMSISEVFGEF 126
Query: 129 ASGKTTLA--LHVIAEAQRQ-GGY---CVFIDAEHALDPS----LAETIGVKT----ENL 174
GKT L+ + V+A+ ++ GG +ID E P +AE V EN+
Sbjct: 127 RCGKTQLSHTMSVVAQLPKEMGGADGKVAYIDTEGTFRPERIAQIAERFSVDPDSAQENI 186
Query: 175 LLAQPDCGEQALSLVDTLIRSGXXXXXXXXXXXXLVPKGELDGEMGDAHMAMQARLMSQA 234
A+ E L L++TL R ++ +D G +A + + ++Q
Sbjct: 187 AYARALNSEHQLELLNTLSREFAGGEYRLLIIDSIMNCFRVD-YCGRGELADRQQKLNQF 245
Query: 235 LRKLSHSLSLSQTILIFINQVFS 257
L +L+H ++ NQV S
Sbjct: 246 LMRLAHMAEEFNVCVLMTNQVQS 268
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.133 0.381 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 271 228 0.00081 113 3 11 22 0.41 33
32 0.41 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 29
No. of states in DFA: 604 (64 KB)
Total size of DFA: 157 KB (2093 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.06u 0.32s 17.38t Elapsed: 00:00:01
Total cpu time: 17.06u 0.32s 17.38t Elapsed: 00:00:01
Start: Tue May 21 02:05:07 2013 End: Tue May 21 02:05:08 2013