BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024152
(271 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZUP2|RECA3_ARATH DNA repair protein recA homolog 3, mitochondrial OS=Arabidopsis
thaliana GN=At2g19490 PE=2 SV=2
Length = 430
Score = 360 bits (925), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 200/257 (77%), Positives = 224/257 (87%), Gaps = 7/257 (2%)
Query: 1 MASLLRNASLLRRCLLSVSPPHPHPQSFRGGMLETSTQICNFSSKSKRKSKSDGSDSGEE 60
MA +LRN LR L S + R ++ TS Q+ F++K+K+KSKSDG+ S EE
Sbjct: 1 MARILRNVYSLRSSLFS-------SELLRRSVVGTSFQLRGFAAKAKKKSKSDGNGSSEE 53
Query: 61 NMSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGR 120
MSKK++ALQQALDQITSSFGKGSIM+LGR+V+PR+VPV STGSFALD+ALG GGLPKGR
Sbjct: 54 GMSKKEIALQQALDQITSSFGKGSIMYLGRAVSPRNVPVFSTGSFALDVALGVGGLPKGR 113
Query: 121 VVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPD 180
VVEIYGPEASGKTTLALHVIAEAQ+QGG CVF+DAEHALD SLA+ IGV TENLLL+QPD
Sbjct: 114 VVEIYGPEASGKTTLALHVIAEAQKQGGTCVFVDAEHALDSSLAKAIGVNTENLLLSQPD 173
Query: 181 CGEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSH 240
CGEQALSLVDTLIRSGSVDV+VVDSVAALVPKGEL+GEMGDAHMAMQARLMSQALRKLSH
Sbjct: 174 CGEQALSLVDTLIRSGSVDVIVVDSVAALVPKGELEGEMGDAHMAMQARLMSQALRKLSH 233
Query: 241 SLSLSQTILIFINQVFS 257
SLSLSQT+LIFINQV S
Sbjct: 234 SLSLSQTLLIFINQVRS 250
>sp|Q08327|RECA_ACEPO Protein RecA OS=Acetobacter polyoxogenes GN=recA PE=3 SV=1
Length = 348
Score = 263 bits (673), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 127/191 (66%), Positives = 156/191 (81%), Gaps = 1/191 (0%)
Query: 65 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 124
K AL+ AL QI +FGKGSIM +G T V V+STGS LDIALG GGLP+GR++EI
Sbjct: 9 KSKALEGALSQIERAFGKGSIMRMGERPT-EQVDVISTGSLGLDIALGIGGLPRGRIIEI 67
Query: 125 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 184
YGPE+SGKTT+ALH IAEAQR+GG C FIDAEHALDP A +GV +NLL++QPD GEQ
Sbjct: 68 YGPESSGKTTMALHAIAEAQRKGGTCAFIDAEHALDPGYARKLGVDVDNLLISQPDAGEQ 127
Query: 185 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 244
AL + DTL+RSG+VDV+VVDSVAALVP+ EL+G+MGD+H+ + ARLMSQALRKL+ S+S
Sbjct: 128 ALEIADTLVRSGAVDVLVVDSVAALVPRAELEGDMGDSHVGLHARLMSQALRKLTGSVSR 187
Query: 245 SQTILIFINQV 255
S T+LIF+NQ+
Sbjct: 188 SNTMLIFLNQI 198
>sp|A6X0E8|RECA_OCHA4 Protein RecA OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882
/ NCTC 12168) GN=recA PE=3 SV=1
Length = 361
Score = 263 bits (672), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 127/197 (64%), Positives = 155/197 (78%)
Query: 59 EENMSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPK 118
EEN K AL AL QI +FGKGSIM LG++ + V TGS +LDIALG GGLPK
Sbjct: 10 EENSVDKTKALDAALSQIERAFGKGSIMRLGKNAPVIEIETVPTGSLSLDIALGVGGLPK 69
Query: 119 GRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQ 178
GR+VEIYGPE+SGKTTLALH IAEAQ++GG C F+DAEHALDP A +GV ENLL++Q
Sbjct: 70 GRIVEIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQ 129
Query: 179 PDCGEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKL 238
PD GEQAL + DTL+RSG++DV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL
Sbjct: 130 PDTGEQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKL 189
Query: 239 SHSLSLSQTILIFINQV 255
+ S+S S ++IFINQ+
Sbjct: 190 TASISRSNCMVIFINQI 206
>sp|Q2W9P9|RECA_MAGSA Protein RecA OS=Magnetospirillum magneticum (strain AMB-1 / ATCC
700264) GN=recA PE=3 SV=1
Length = 359
Score = 263 bits (672), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 124/188 (65%), Positives = 154/188 (81%)
Query: 68 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 127
AL+ A+ QI +FGKGSIM LG VVSTGS LD+ALG GG+P+GR++E+YGP
Sbjct: 19 ALEAAVSQIERAFGKGSIMKLGGKDQVVETEVVSTGSLGLDVALGIGGVPRGRIIEVYGP 78
Query: 128 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 187
E+SGKTTLALH+IAEAQ++GG C F+DAEHALDPS A +GV + LL++QPD GEQAL
Sbjct: 79 ESSGKTTLALHIIAEAQKKGGTCAFVDAEHALDPSYARKLGVNLDELLISQPDAGEQALE 138
Query: 188 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 247
+ DTL+RSG+VDV+VVDSVAALVP+ EL+GEMGD HM + ARLMSQALRKL+ S+S S+T
Sbjct: 139 IADTLVRSGAVDVLVVDSVAALVPRAELEGEMGDNHMGLHARLMSQALRKLTGSVSKSKT 198
Query: 248 ILIFINQV 255
I+IFINQ+
Sbjct: 199 IVIFINQI 206
>sp|A5FXB8|RECA_ACICJ Protein RecA OS=Acidiphilium cryptum (strain JF-5) GN=recA PE=3
SV=1
Length = 343
Score = 263 bits (671), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 122/192 (63%), Positives = 157/192 (81%)
Query: 64 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 123
+K+ AL AL QI +FGKGSIM +G + V+STGS LD+ALG GGLP+GRV+E
Sbjct: 2 EKNKALDAALAQIERAFGKGSIMRMGSRSESEAIDVISTGSLGLDLALGIGGLPRGRVIE 61
Query: 124 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 183
IYGPE+SGKTTLALH +AEAQ++GG C F+DAEHALDP A +GV +NLL++QPD GE
Sbjct: 62 IYGPESSGKTTLALHAVAEAQKRGGTCAFVDAEHALDPIYARKLGVDVDNLLISQPDTGE 121
Query: 184 QALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 243
QAL + DTL+RSG++DV+VVDSVAALVP+ EL+GEMGD+H+ + ARLMSQALRKL+ S+S
Sbjct: 122 QALEIADTLVRSGAIDVLVVDSVAALVPRAELEGEMGDSHVGLHARLMSQALRKLTGSIS 181
Query: 244 LSQTILIFINQV 255
S+T++IF+NQ+
Sbjct: 182 RSKTLVIFLNQI 193
>sp|Q11IW6|RECA_MESSB Protein RecA OS=Mesorhizobium sp. (strain BNC1) GN=recA PE=3 SV=1
Length = 360
Score = 263 bits (671), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 127/197 (64%), Positives = 155/197 (78%)
Query: 59 EENMSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPK 118
EEN K AL AL QI +FGKGSIM LG + + +STGS LDIALG GGLP+
Sbjct: 10 EENGVDKSKALDAALSQIERAFGKGSIMRLGANDKVVEIETISTGSLGLDIALGVGGLPR 69
Query: 119 GRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQ 178
GR++EIYGPE+SGKTTLALH +AEAQ++GG C FIDAEHALDP A +GV ENLL++Q
Sbjct: 70 GRIIEIYGPESSGKTTLALHTVAEAQKKGGICGFIDAEHALDPVYARKLGVDLENLLISQ 129
Query: 179 PDCGEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKL 238
PD GEQAL + DTL+RSG+VDV+VVDSVAAL P+ E++GEMG++ MQARLMSQALRKL
Sbjct: 130 PDTGEQALEICDTLVRSGAVDVIVVDSVAALTPRAEIEGEMGESLPGMQARLMSQALRKL 189
Query: 239 SHSLSLSQTILIFINQV 255
+ S+S S T++IFINQ+
Sbjct: 190 TASISRSNTMVIFINQI 206
>sp|B0CH00|RECA_BRUSI Protein RecA OS=Brucella suis (strain ATCC 23445 / NCTC 10510)
GN=recA PE=3 SV=1
Length = 361
Score = 262 bits (670), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 127/197 (64%), Positives = 156/197 (79%)
Query: 59 EENMSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPK 118
E+N K AL AL QI +FGKGSIM LG++ + VSTGS +LDIALG GGLPK
Sbjct: 10 EDNSVDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPK 69
Query: 119 GRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQ 178
GR+VEIYGPE+SGKTTLALH IAEAQ++GG C F+DAEHALDP A +GV ENLL++Q
Sbjct: 70 GRIVEIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQ 129
Query: 179 PDCGEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKL 238
PD GEQAL + DTL+RSG++DV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL
Sbjct: 130 PDTGEQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKL 189
Query: 239 SHSLSLSQTILIFINQV 255
+ S+S S ++IFINQ+
Sbjct: 190 TGSISRSNCMVIFINQI 206
>sp|P65976|RECA_BRUSU Protein RecA OS=Brucella suis biovar 1 (strain 1330) GN=recA PE=3
SV=1
Length = 361
Score = 262 bits (670), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 127/197 (64%), Positives = 156/197 (79%)
Query: 59 EENMSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPK 118
E+N K AL AL QI +FGKGSIM LG++ + VSTGS +LDIALG GGLPK
Sbjct: 10 EDNSVDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPK 69
Query: 119 GRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQ 178
GR+VEIYGPE+SGKTTLALH IAEAQ++GG C F+DAEHALDP A +GV ENLL++Q
Sbjct: 70 GRIVEIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQ 129
Query: 179 PDCGEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKL 238
PD GEQAL + DTL+RSG++DV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL
Sbjct: 130 PDTGEQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKL 189
Query: 239 SHSLSLSQTILIFINQV 255
+ S+S S ++IFINQ+
Sbjct: 190 TGSISRSNCMVIFINQI 206
>sp|P65975|RECA_BRUME Protein RecA OS=Brucella melitensis biotype 1 (strain 16M / ATCC
23456 / NCTC 10094) GN=recA PE=3 SV=1
Length = 361
Score = 262 bits (670), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 127/197 (64%), Positives = 156/197 (79%)
Query: 59 EENMSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPK 118
E+N K AL AL QI +FGKGSIM LG++ + VSTGS +LDIALG GGLPK
Sbjct: 10 EDNSVDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPK 69
Query: 119 GRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQ 178
GR+VEIYGPE+SGKTTLALH IAEAQ++GG C F+DAEHALDP A +GV ENLL++Q
Sbjct: 70 GRIVEIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQ 129
Query: 179 PDCGEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKL 238
PD GEQAL + DTL+RSG++DV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL
Sbjct: 130 PDTGEQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKL 189
Query: 239 SHSLSLSQTILIFINQV 255
+ S+S S ++IFINQ+
Sbjct: 190 TGSISRSNCMVIFINQI 206
>sp|C0RJG9|RECA_BRUMB Protein RecA OS=Brucella melitensis biotype 2 (strain ATCC 23457)
GN=recA PE=3 SV=1
Length = 361
Score = 262 bits (670), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 127/197 (64%), Positives = 156/197 (79%)
Query: 59 EENMSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPK 118
E+N K AL AL QI +FGKGSIM LG++ + VSTGS +LDIALG GGLPK
Sbjct: 10 EDNSVDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPK 69
Query: 119 GRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQ 178
GR+VEIYGPE+SGKTTLALH IAEAQ++GG C F+DAEHALDP A +GV ENLL++Q
Sbjct: 70 GRIVEIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQ 129
Query: 179 PDCGEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKL 238
PD GEQAL + DTL+RSG++DV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL
Sbjct: 130 PDTGEQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKL 189
Query: 239 SHSLSLSQTILIFINQV 255
+ S+S S ++IFINQ+
Sbjct: 190 TGSISRSNCMVIFINQI 206
>sp|A9M5L8|RECA_BRUC2 Protein RecA OS=Brucella canis (strain ATCC 23365 / NCTC 10854)
GN=recA PE=3 SV=1
Length = 361
Score = 262 bits (670), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 127/197 (64%), Positives = 156/197 (79%)
Query: 59 EENMSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPK 118
E+N K AL AL QI +FGKGSIM LG++ + VSTGS +LDIALG GGLPK
Sbjct: 10 EDNSVDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPK 69
Query: 119 GRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQ 178
GR+VEIYGPE+SGKTTLALH IAEAQ++GG C F+DAEHALDP A +GV ENLL++Q
Sbjct: 70 GRIVEIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQ 129
Query: 179 PDCGEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKL 238
PD GEQAL + DTL+RSG++DV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL
Sbjct: 130 PDTGEQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKL 189
Query: 239 SHSLSLSQTILIFINQV 255
+ S+S S ++IFINQ+
Sbjct: 190 TGSISRSNCMVIFINQI 206
>sp|Q04761|RECA_BRUAB Protein RecA OS=Brucella abortus biovar 1 (strain 9-941) GN=recA
PE=3 SV=2
Length = 361
Score = 262 bits (670), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 127/197 (64%), Positives = 156/197 (79%)
Query: 59 EENMSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPK 118
E+N K AL AL QI +FGKGSIM LG++ + VSTGS +LDIALG GGLPK
Sbjct: 10 EDNSVDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPK 69
Query: 119 GRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQ 178
GR+VEIYGPE+SGKTTLALH IAEAQ++GG C F+DAEHALDP A +GV ENLL++Q
Sbjct: 70 GRIVEIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQ 129
Query: 179 PDCGEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKL 238
PD GEQAL + DTL+RSG++DV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL
Sbjct: 130 PDTGEQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKL 189
Query: 239 SHSLSLSQTILIFINQV 255
+ S+S S ++IFINQ+
Sbjct: 190 TGSISRSNCMVIFINQI 206
>sp|Q2YRU7|RECA_BRUA2 Protein RecA OS=Brucella abortus (strain 2308) GN=recA PE=3 SV=1
Length = 361
Score = 262 bits (670), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 127/197 (64%), Positives = 156/197 (79%)
Query: 59 EENMSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPK 118
E+N K AL AL QI +FGKGSIM LG++ + VSTGS +LDIALG GGLPK
Sbjct: 10 EDNSVDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPK 69
Query: 119 GRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQ 178
GR+VEIYGPE+SGKTTLALH IAEAQ++GG C F+DAEHALDP A +GV ENLL++Q
Sbjct: 70 GRIVEIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQ 129
Query: 179 PDCGEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKL 238
PD GEQAL + DTL+RSG++DV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL
Sbjct: 130 PDTGEQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKL 189
Query: 239 SHSLSLSQTILIFINQV 255
+ S+S S ++IFINQ+
Sbjct: 190 TGSISRSNCMVIFINQI 206
>sp|B2S648|RECA_BRUA1 Protein RecA OS=Brucella abortus (strain S19) GN=recA PE=3 SV=1
Length = 361
Score = 262 bits (670), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 127/197 (64%), Positives = 156/197 (79%)
Query: 59 EENMSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPK 118
E+N K AL AL QI +FGKGSIM LG++ + VSTGS +LDIALG GGLPK
Sbjct: 10 EDNSVDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPK 69
Query: 119 GRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQ 178
GR+VEIYGPE+SGKTTLALH IAEAQ++GG C F+DAEHALDP A +GV ENLL++Q
Sbjct: 70 GRIVEIYGPESSGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQ 129
Query: 179 PDCGEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKL 238
PD GEQAL + DTL+RSG++DV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL
Sbjct: 130 PDTGEQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKL 189
Query: 239 SHSLSLSQTILIFINQV 255
+ S+S S ++IFINQ+
Sbjct: 190 TGSISRSNCMVIFINQI 206
>sp|Q1QMW2|RECA_NITHX Protein RecA OS=Nitrobacter hamburgensis (strain X14 / DSM 10229)
GN=recA PE=3 SV=1
Length = 362
Score = 261 bits (668), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 125/191 (65%), Positives = 155/191 (81%)
Query: 65 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 124
K AL AL QI FGKGS+M LG++ + V+S+GS LDIALG GGLPKGRVVEI
Sbjct: 16 KSKALSAALSQIERQFGKGSVMKLGKNDKSMDIEVISSGSLGLDIALGVGGLPKGRVVEI 75
Query: 125 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 184
YGPE+SGKTTLALH +AEAQ++GG C FIDAEHALDP A +GVK ++LL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPIYARKLGVKVDDLLISQPDHGEQ 135
Query: 185 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 244
AL + DTL+RSG+VDV+++DSVAALVP+ EL+GEMGDA +QARLMSQALRKL+ S++
Sbjct: 136 ALEIADTLVRSGAVDVLIIDSVAALVPRAELEGEMGDALPGLQARLMSQALRKLTASINK 195
Query: 245 SQTILIFINQV 255
S T++IFINQ+
Sbjct: 196 SNTMVIFINQI 206
>sp|P62209|RECA_AZOL4 Protein RecA OS=Azospirillum lipoferum (strain 4B) GN=recA PE=1
SV=2
Length = 359
Score = 260 bits (665), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 126/197 (63%), Positives = 154/197 (78%)
Query: 59 EENMSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPK 118
E++ K AL AL QI +FGKGSIM LG V+STGS LDIALG GGLPK
Sbjct: 10 EKDSMDKQKALDAALSQIERAFGKGSIMKLGARENLVETEVISTGSLGLDIALGIGGLPK 69
Query: 119 GRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQ 178
GR+VEIYGPE+SGKTTLALH IA+AQ+ GG C F+DAEHALDPS A +GV + LL++Q
Sbjct: 70 GRIVEIYGPESSGKTTLALHAIAQAQKAGGTCAFVDAEHALDPSYARKLGVNIDELLISQ 129
Query: 179 PDCGEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKL 238
PD GEQAL + DTL+RSG++DV+VVDSVAALVP+ EL+GEMGD+H+ + ARLMSQALRKL
Sbjct: 130 PDAGEQALEIADTLVRSGAIDVLVVDSVAALVPRAELEGEMGDSHVGLHARLMSQALRKL 189
Query: 239 SHSLSLSQTILIFINQV 255
+ S+S S ++IFINQ+
Sbjct: 190 TGSISKSNCLVIFINQI 206
>sp|Q5ZUJ7|RECA_LEGPH Protein RecA OS=Legionella pneumophila subsp. pneumophila (strain
Philadelphia 1 / ATCC 33152 / DSM 7513) GN=recA PE=3
SV=1
Length = 348
Score = 260 bits (665), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 124/197 (62%), Positives = 152/197 (77%), Gaps = 3/197 (1%)
Query: 59 EENMSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPK 118
EEN K AL AL QI FGKGS+M +G S R + +STGS LDIALG GGLPK
Sbjct: 2 EENKQK---ALSAALSQIERQFGKGSVMRMGDSTVSRDIEAISTGSLGLDIALGIGGLPK 58
Query: 119 GRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQ 178
GR+VEIYGPE+SGKTTL L VIAE Q+ GG FIDAEHALDPS A+ +GVK + LL++Q
Sbjct: 59 GRIVEIYGPESSGKTTLTLQVIAECQKMGGTAAFIDAEHALDPSYAQKLGVKVDELLVSQ 118
Query: 179 PDCGEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKL 238
PD GEQAL + D L+RS +VDVV++DSVAAL PK E++GEMGD+H+ +QARLMSQALRKL
Sbjct: 119 PDTGEQALEITDMLVRSAAVDVVIIDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKL 178
Query: 239 SHSLSLSQTILIFINQV 255
+ ++ S T++IFINQ+
Sbjct: 179 TANIKRSNTLVIFINQI 195
>sp|A5ICV8|RECA_LEGPC Protein RecA OS=Legionella pneumophila (strain Corby) GN=recA PE=3
SV=1
Length = 348
Score = 260 bits (665), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 124/197 (62%), Positives = 152/197 (77%), Gaps = 3/197 (1%)
Query: 59 EENMSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPK 118
EEN K AL AL QI FGKGS+M +G S R + +STGS LDIALG GGLPK
Sbjct: 2 EENKQK---ALSAALSQIERQFGKGSVMRMGDSTVSRDIEAISTGSLGLDIALGIGGLPK 58
Query: 119 GRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQ 178
GR+VEIYGPE+SGKTTL L VIAE Q+ GG FIDAEHALDPS A+ +GVK + LL++Q
Sbjct: 59 GRIVEIYGPESSGKTTLTLQVIAECQKMGGTAAFIDAEHALDPSYAQKLGVKVDELLVSQ 118
Query: 179 PDCGEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKL 238
PD GEQAL + D L+RS +VDVV++DSVAAL PK E++GEMGD+H+ +QARLMSQALRKL
Sbjct: 119 PDTGEQALEITDMLVRSAAVDVVIIDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKL 178
Query: 239 SHSLSLSQTILIFINQV 255
+ ++ S T++IFINQ+
Sbjct: 179 TANIKRSNTLVIFINQI 195
>sp|Q5X4B5|RECA_LEGPA Protein RecA OS=Legionella pneumophila (strain Paris) GN=recA PE=3
SV=1
Length = 348
Score = 260 bits (665), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 124/197 (62%), Positives = 152/197 (77%), Gaps = 3/197 (1%)
Query: 59 EENMSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPK 118
EEN K AL AL QI FGKGS+M +G S R + +STGS LDIALG GGLPK
Sbjct: 2 EENKQK---ALSAALSQIERQFGKGSVMRMGDSTVSRDIEAISTGSLGLDIALGIGGLPK 58
Query: 119 GRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQ 178
GR+VEIYGPE+SGKTTL L VIAE Q+ GG FIDAEHALDPS A+ +GVK + LL++Q
Sbjct: 59 GRIVEIYGPESSGKTTLTLQVIAECQKMGGTAAFIDAEHALDPSYAQKLGVKVDELLVSQ 118
Query: 179 PDCGEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKL 238
PD GEQAL + D L+RS +VDVV++DSVAAL PK E++GEMGD+H+ +QARLMSQALRKL
Sbjct: 119 PDTGEQALEITDMLVRSAAVDVVIIDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKL 178
Query: 239 SHSLSLSQTILIFINQV 255
+ ++ S T++IFINQ+
Sbjct: 179 TANIKRSNTLVIFINQI 195
>sp|Q89I84|RECA_BRAJA Protein RecA OS=Bradyrhizobium japonicum (strain USDA 110) GN=recA
PE=3 SV=1
Length = 362
Score = 260 bits (665), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 128/191 (67%), Positives = 152/191 (79%)
Query: 65 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 124
K AL AL QI FGKGS+M LG++ V VS+GS LDIALG GGLPKGRVVEI
Sbjct: 16 KSKALAAALSQIERQFGKGSVMKLGKNDRSMDVEAVSSGSLGLDIALGIGGLPKGRVVEI 75
Query: 125 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 184
YGPE+SGKTTLALH +AEAQ++GG C FIDAEHALDP A +GV + LL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGVNIDELLISQPDTGEQ 135
Query: 185 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 244
AL + DTL+RSG+VDV+VVDSVAALVPK EL+GEMGDA +QARLMSQALRKL+ S++
Sbjct: 136 ALEICDTLVRSGAVDVLVVDSVAALVPKAELEGEMGDALPGLQARLMSQALRKLTASINK 195
Query: 245 SQTILIFINQV 255
S T++IFINQ+
Sbjct: 196 SHTMVIFINQI 206
>sp|Q5WVQ0|RECA_LEGPL Protein RecA OS=Legionella pneumophila (strain Lens) GN=recA PE=3
SV=1
Length = 348
Score = 260 bits (664), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 124/197 (62%), Positives = 152/197 (77%), Gaps = 3/197 (1%)
Query: 59 EENMSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPK 118
EEN K AL AL QI FGKGS+M +G S R + +STGS LDIALG GGLPK
Sbjct: 2 EENKQK---ALSAALSQIERQFGKGSVMRMGDSTVSRDIEAISTGSLGLDIALGIGGLPK 58
Query: 119 GRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQ 178
GR+VEIYGPE+SGKTTL L VIAE Q+ GG FIDAEHALDPS A+ +GVK + LL++Q
Sbjct: 59 GRIVEIYGPESSGKTTLTLQVIAECQKMGGTAAFIDAEHALDPSYAQKLGVKVDELLVSQ 118
Query: 179 PDCGEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKL 238
PD GEQAL + D L+RS +VDVV++DSVAAL PK E++GEMGD+H+ +QARLMSQALRKL
Sbjct: 119 PDTGEQALEITDMLVRSAAVDVVIIDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKL 178
Query: 239 SHSLSLSQTILIFINQV 255
+ ++ S T++IFINQ+
Sbjct: 179 TANIKRSNTLVIFINQI 195
>sp|B1YMB9|RECA_EXIS2 Protein RecA OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM
13490 / 255-15) GN=recA PE=3 SV=1
Length = 347
Score = 260 bits (664), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 125/194 (64%), Positives = 155/194 (79%), Gaps = 1/194 (0%)
Query: 62 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 121
MS + AL+ AL QI FGKGSIM LG S R V V+S+GS LDIALG GG P+GRV
Sbjct: 1 MSDRKAALEMALRQIEKQFGKGSIMKLGESADQR-VSVISSGSITLDIALGAGGYPRGRV 59
Query: 122 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 181
+E+YGPE+SGKTT++LH IAE Q+QGG FIDAEHALDP+ A +GV + LLL+QPD
Sbjct: 60 IEVYGPESSGKTTVSLHAIAEVQKQGGQAAFIDAEHALDPAYASKLGVNIDELLLSQPDT 119
Query: 182 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 241
GEQAL + + L+RSG+VD++VVDSVAALVPK E++GEMGD+HM +QARLMSQALRKLS +
Sbjct: 120 GEQALEIAEALVRSGAVDILVVDSVAALVPKAEIEGEMGDSHMGLQARLMSQALRKLSGA 179
Query: 242 LSLSQTILIFINQV 255
+ S+TI+IFINQ+
Sbjct: 180 TNKSKTIVIFINQI 193
>sp|B9JFS7|RECA_AGRRK Protein RecA OS=Agrobacterium radiobacter (strain K84 / ATCC
BAA-868) GN=recA PE=3 SV=1
Length = 361
Score = 260 bits (664), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 126/197 (63%), Positives = 155/197 (78%)
Query: 59 EENMSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPK 118
E+ K AL+ AL QI SFGKGSIM LG + + VSTGS +LDIALG GGLPK
Sbjct: 10 EDKSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEIETVSTGSLSLDIALGIGGLPK 69
Query: 119 GRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQ 178
GR+VEIYGPE+SGKTTLAL IAEAQ++GG C F+DAEHALDP A +GV +NLL++Q
Sbjct: 70 GRIVEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQ 129
Query: 179 PDCGEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKL 238
PD GEQAL + DTL+RSG++DV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL
Sbjct: 130 PDTGEQALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKL 189
Query: 239 SHSLSLSQTILIFINQV 255
+ S+S S T++IFINQ+
Sbjct: 190 TASISKSNTMVIFINQI 206
>sp|Q9ZIQ0|RECA_RHOVI Protein RecA OS=Rhodopseudomonas viridis GN=recA PE=3 SV=1
Length = 348
Score = 260 bits (664), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 126/191 (65%), Positives = 153/191 (80%)
Query: 65 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 124
K AL AL QI +FGKGSIM LG+S V +STGS LDIALG GGLP+GRVVEI
Sbjct: 3 KTKALDAALTQIERAFGKGSIMRLGKSGAALEVETISTGSLGLDIALGIGGLPRGRVVEI 62
Query: 125 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 184
+GPE+SGKTTLALH +AEAQ++GG C FIDAEHALDP A +GV ++LL++QPD GEQ
Sbjct: 63 FGPESSGKTTLALHTVAEAQKKGGVCAFIDAEHALDPLYARKLGVNLDDLLISQPDAGEQ 122
Query: 185 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 244
AL + DTL+RSG++DV+VVDSVAALVP+ EL+GEMGD+ MQARLMSQALRKL+ S+S
Sbjct: 123 ALEIADTLVRSGAIDVLVVDSVAALVPRAELEGEMGDSQPGMQARLMSQALRKLTASISR 182
Query: 245 SQTILIFINQV 255
S ++IFINQ+
Sbjct: 183 SNCMVIFINQI 193
>sp|C0QI90|RECA_DESAH Protein RecA OS=Desulfobacterium autotrophicum (strain ATCC 43914 /
DSM 3382 / HRM2) GN=recA PE=3 SV=1
Length = 347
Score = 259 bits (663), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 123/195 (63%), Positives = 158/195 (81%), Gaps = 3/195 (1%)
Query: 62 MSKKDLALQQALDQITSSFGKGSIMWLG-RSVTPRHVPVVSTGSFALDIALGTGGLPKGR 120
+++KD A+Q A+ QI FGKGSIM LG R + + VP++STGS ALD ALG GG P+GR
Sbjct: 4 LTEKDKAIQTAMGQIERQFGKGSIMKLGAREI--QAVPIISTGSLALDKALGVGGFPRGR 61
Query: 121 VVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPD 180
V+EIYGPE+SGKTTLALH +AEAQRQGG FIDAEHALD + A +GV + LL++QPD
Sbjct: 62 VIEIYGPESSGKTTLALHAVAEAQRQGGIAAFIDAEHALDVAYARRLGVNCDELLVSQPD 121
Query: 181 CGEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSH 240
GEQAL +VD L+RSG+VD+++VDSVAALVP+ E++G+MGD+HM +QARLMSQALRKL+
Sbjct: 122 TGEQALEIVDMLVRSGAVDIIIVDSVAALVPRAEIEGDMGDSHMGLQARLMSQALRKLTA 181
Query: 241 SLSLSQTILIFINQV 255
++ + T LIFINQ+
Sbjct: 182 TIGKTHTTLIFINQI 196
>sp|Q3ST50|RECA_NITWN Protein RecA OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC
25391) GN=recA PE=3 SV=1
Length = 362
Score = 259 bits (663), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 123/191 (64%), Positives = 154/191 (80%)
Query: 65 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 124
K AL AL QI FGKGS+M LG++ V V+S+GS LDIALG GGLPKGR+VE+
Sbjct: 16 KSKALSAALSQIERQFGKGSVMKLGKNDKSMDVEVISSGSLGLDIALGVGGLPKGRIVEV 75
Query: 125 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 184
YGPE+SGKTTLALH +AEAQ++GG C FIDAEHALDP A +GV ++LL++QPD GEQ
Sbjct: 76 YGPESSGKTTLALHAVAEAQKKGGICAFIDAEHALDPVYARKLGVNVDDLLISQPDHGEQ 135
Query: 185 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 244
AL + DTL+RSG+VDV+++DSVAALVP+ EL+GEMGDA +QARLMSQALRKL+ S++
Sbjct: 136 ALEIADTLVRSGAVDVLIIDSVAALVPRAELEGEMGDALPGLQARLMSQALRKLTASINK 195
Query: 245 SQTILIFINQV 255
S T++IFINQ+
Sbjct: 196 SNTMVIFINQI 206
>sp|C3MD93|RECA_RHISN Protein RecA OS=Rhizobium sp. (strain NGR234) GN=recA PE=3 SV=1
Length = 361
Score = 259 bits (663), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 127/197 (64%), Positives = 154/197 (78%)
Query: 59 EENMSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPK 118
E+ K AL+ AL QI SFGKGSIM LG + + VSTGS LDIALG GGLPK
Sbjct: 10 EDKSVDKSKALEAALSQIERSFGKGSIMKLGSKDSVIEIETVSTGSLGLDIALGIGGLPK 69
Query: 119 GRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQ 178
GR++EIYGPE+SGKTTLAL IAEAQ++GG C F+DAEHALDP A +GV ENLL++Q
Sbjct: 70 GRIIEIYGPESSGKTTLALQTIAEAQKKGGICGFVDAEHALDPVYARKLGVDLENLLISQ 129
Query: 179 PDCGEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKL 238
PD GEQAL + DTL+RSG++DV+VVDSVAALVP+ E++GEMGD+ MQARLMSQALRKL
Sbjct: 130 PDTGEQALEITDTLVRSGAIDVLVVDSVAALVPRAEIEGEMGDSLPGMQARLMSQALRKL 189
Query: 239 SHSLSLSQTILIFINQV 255
+ S+S S ++IFINQ+
Sbjct: 190 TASISKSNCMVIFINQI 206
>sp|Q2RQH9|RECA_RHORT Protein RecA OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB
8255) GN=recA PE=3 SV=1
Length = 366
Score = 259 bits (663), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 121/197 (61%), Positives = 160/197 (81%)
Query: 59 EENMSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPK 118
+++ K AL+ A+ QI +FGKGSIM LG+ + + +STGS LDIALG GGLP+
Sbjct: 10 DKDTMDKQKALEAAVGQIERAFGKGSIMKLGQRGSVVDIESISTGSLGLDIALGIGGLPR 69
Query: 119 GRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQ 178
GR+VEIYGPE+SGKTTLALHV+AEAQ++GG C F+DAEHA DP A +GV ++LL++Q
Sbjct: 70 GRIVEIYGPESSGKTTLALHVVAEAQKKGGQCAFVDAEHAFDPLYARKLGVSLDDLLVSQ 129
Query: 179 PDCGEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKL 238
PD GEQAL + DTL+RSG++DV+V+DSVAALVPK EL+G+MGD+H+ +QARLMSQALRKL
Sbjct: 130 PDTGEQALEIADTLVRSGAIDVLVIDSVAALVPKAELEGDMGDSHVGLQARLMSQALRKL 189
Query: 239 SHSLSLSQTILIFINQV 255
+ ++S S T++IFINQ+
Sbjct: 190 TGTVSRSNTLIIFINQI 206
>sp|Q05358|RECA_LEGPN Protein RecA OS=Legionella pneumophila GN=recA PE=3 SV=1
Length = 348
Score = 259 bits (662), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 123/197 (62%), Positives = 152/197 (77%), Gaps = 3/197 (1%)
Query: 59 EENMSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPK 118
EEN K AL A+ QI FGKGS+M +G S R + +STGS LDIALG GGLPK
Sbjct: 2 EENKQK---ALSAAVSQIERQFGKGSVMRMGDSTVSRDIEAISTGSLGLDIALGIGGLPK 58
Query: 119 GRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQ 178
GR+VEIYGPE+SGKTTL L VIAE Q+ GG FIDAEHALDPS A+ +GVK + LL++Q
Sbjct: 59 GRIVEIYGPESSGKTTLTLQVIAECQKMGGTAAFIDAEHALDPSYAQKLGVKVDELLVSQ 118
Query: 179 PDCGEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKL 238
PD GEQAL + D L+RS +VDVV++DSVAAL PK E++GEMGD+H+ +QARLMSQALRKL
Sbjct: 119 PDTGEQALEITDMLVRSAAVDVVIIDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKL 178
Query: 239 SHSLSLSQTILIFINQV 255
+ ++ S T++IFINQ+
Sbjct: 179 TANIKRSNTLVIFINQI 195
>sp|Q1MFZ8|RECA_RHIL3 Protein RecA OS=Rhizobium leguminosarum bv. viciae (strain 3841)
GN=recA PE=3 SV=1
Length = 364
Score = 259 bits (662), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 124/197 (62%), Positives = 154/197 (78%)
Query: 59 EENMSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPK 118
E+ K AL+ AL QI SFGKGSIM LG + + +STGS LDIALG GGLP+
Sbjct: 10 EDKSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEIETISTGSLGLDIALGVGGLPR 69
Query: 119 GRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQ 178
GR++EIYGPE+SGKTTLAL IAEAQ++GG C F+DAEHALDP A +GV +NLL++Q
Sbjct: 70 GRIIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQ 129
Query: 179 PDCGEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKL 238
PD GEQAL + DTL+RSG+VDV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL
Sbjct: 130 PDTGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKL 189
Query: 239 SHSLSLSQTILIFINQV 255
+ S+S S T++IFINQ+
Sbjct: 190 TASISKSNTMVIFINQI 206
>sp|B9JX56|RECA_AGRVS Protein RecA OS=Agrobacterium vitis (strain S4 / ATCC BAA-846)
GN=recA PE=3 SV=1
Length = 362
Score = 258 bits (660), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 125/197 (63%), Positives = 154/197 (78%)
Query: 59 EENMSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPK 118
E+ K AL+ AL QI SFGKGSIM LG + V VSTGS +LDIALG GGLPK
Sbjct: 10 EDKTVDKSKALEAALSQIERSFGKGSIMKLGANEKIVEVETVSTGSLSLDIALGIGGLPK 69
Query: 119 GRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQ 178
GR++EIYGPE+SGKTTLAL IAEAQ++GG C F+DAEHALDP A +GV +NLL++Q
Sbjct: 70 GRIIEIYGPESSGKTTLALQTIAEAQKKGGVCAFVDAEHALDPVYARKLGVDLQNLLISQ 129
Query: 179 PDCGEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKL 238
PD GEQAL + DTL+RSG++DV+V+DSVAAL PK E++GEMGD+ MQARLMSQALRKL
Sbjct: 130 PDTGEQALEITDTLVRSGAIDVLVIDSVAALTPKAEIEGEMGDSLPGMQARLMSQALRKL 189
Query: 239 SHSLSLSQTILIFINQV 255
+ S+S S +++FINQ+
Sbjct: 190 TGSISRSNCMVVFINQI 206
>sp|A6U9N5|RECA_SINMW Protein RecA OS=Sinorhizobium medicae (strain WSM419) GN=recA PE=3
SV=1
Length = 361
Score = 258 bits (660), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 127/197 (64%), Positives = 154/197 (78%)
Query: 59 EENMSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPK 118
E+ K AL+ AL QI +FGKGSIM LG + + VSTGS LDIALG GGLPK
Sbjct: 10 EDKSVDKSKALEAALSQIERAFGKGSIMKLGAKDSVVEIETVSTGSLGLDIALGIGGLPK 69
Query: 119 GRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQ 178
GR+VEIYGPE+SGKTTLAL IAEAQ++GG C F+DAEHALDP A +GV ENLL++Q
Sbjct: 70 GRIVEIYGPESSGKTTLALQTIAEAQKKGGICGFVDAEHALDPIYARKLGVDLENLLISQ 129
Query: 179 PDCGEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKL 238
PD GEQAL + DTL+RSG++DV+VVDSVAALVP+ E++GEMGD+ MQARLMSQALRKL
Sbjct: 130 PDTGEQALEITDTLVRSGAIDVLVVDSVAALVPRAEIEGEMGDSLPGMQARLMSQALRKL 189
Query: 239 SHSLSLSQTILIFINQV 255
+ S+S S ++IFINQ+
Sbjct: 190 TASISKSNCMVIFINQI 206
>sp|P24543|RECA_RHIET Protein RecA OS=Rhizobium etli GN=recA PE=3 SV=2
Length = 361
Score = 258 bits (660), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 124/197 (62%), Positives = 154/197 (78%)
Query: 59 EENMSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPK 118
E+ K AL+ AL QI SFGKGSIM LG + + +STGS LDIALG GGLPK
Sbjct: 10 EDKSVDKSKALEAALSQIERSFGKGSIMKLGSNENVIEIETISTGSLGLDIALGVGGLPK 69
Query: 119 GRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQ 178
GR++EIYGPE+SGKTTLAL IAE+Q++GG C F+DAEHALDP A +GV +NLL++Q
Sbjct: 70 GRIIEIYGPESSGKTTLALQTIAESQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQ 129
Query: 179 PDCGEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKL 238
PD GEQAL + DTL+RSG+VDV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL
Sbjct: 130 PDTGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKL 189
Query: 239 SHSLSLSQTILIFINQV 255
+ S+S S T++IFINQ+
Sbjct: 190 TASISKSNTMVIFINQI 206
>sp|B5ZRG2|RECA_RHILW Protein RecA OS=Rhizobium leguminosarum bv. trifolii (strain
WSM2304) GN=recA PE=3 SV=1
Length = 362
Score = 258 bits (659), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 124/197 (62%), Positives = 154/197 (78%)
Query: 59 EENMSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPK 118
E+ K AL+ AL QI SFGKGSIM LG + + +STGS LDIALG GGLP+
Sbjct: 10 EDKSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEIETISTGSLGLDIALGVGGLPR 69
Query: 119 GRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQ 178
GR++EIYGPE+SGKTTLAL IAEAQ++GG C F+DAEHALDP A +GV +NLL++Q
Sbjct: 70 GRIIEIYGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQ 129
Query: 179 PDCGEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKL 238
PD GEQAL + DTL+RSG+VDV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL
Sbjct: 130 PDTGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKL 189
Query: 239 SHSLSLSQTILIFINQV 255
+ S+S S T++IFINQ+
Sbjct: 190 TASISKSNTMVIFINQI 206
>sp|B3PPU4|RECA_RHIE6 Protein RecA OS=Rhizobium etli (strain CIAT 652) GN=recA PE=3 SV=1
Length = 362
Score = 258 bits (659), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 124/197 (62%), Positives = 154/197 (78%)
Query: 59 EENMSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPK 118
E+ K AL+ AL QI SFGKGSIM LG + + +STGS LDIALG GGLPK
Sbjct: 10 EDKSVDKSKALEAALSQIERSFGKGSIMKLGSNENVIEIETISTGSLGLDIALGVGGLPK 69
Query: 119 GRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQ 178
GR++EIYGPE+SGKTTLAL IAE+Q++GG C F+DAEHALDP A +GV +NLL++Q
Sbjct: 70 GRIIEIYGPESSGKTTLALQTIAESQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQ 129
Query: 179 PDCGEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKL 238
PD GEQAL + DTL+RSG+VDV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL
Sbjct: 130 PDTGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKL 189
Query: 239 SHSLSLSQTILIFINQV 255
+ S+S S T++IFINQ+
Sbjct: 190 TASISKSNTMVIFINQI 206
>sp|Q9X5D8|RECA_ZYMMO Protein RecA OS=Zymomonas mobilis subsp. mobilis (strain ATCC 31821
/ ZM4 / CP4) GN=recA PE=3 SV=3
Length = 354
Score = 258 bits (659), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 124/199 (62%), Positives = 160/199 (80%), Gaps = 1/199 (0%)
Query: 57 SGEENMSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGL 116
SG++N K AL+ AL QI +FGKGS+M LG S + +S+GS LDIALG GGL
Sbjct: 10 SGKDNNMDKQKALEAALAQIDRAFGKGSVMRLG-SREKIEIDTISSGSLGLDIALGIGGL 68
Query: 117 PKGRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLL 176
P+GR+VEIYGPE+SGKTTLALH IAEAQ+ GG F+DAEHALDP A+ +GV T++L++
Sbjct: 69 PRGRIVEIYGPESSGKTTLALHAIAEAQKAGGTAAFVDAEHALDPVYAKKLGVNTDDLIV 128
Query: 177 AQPDCGEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALR 236
+QPD GEQAL + DTLIRS +VD++VVDSVAAL P+ E++GEMGD+H+ +QARLMSQALR
Sbjct: 129 SQPDTGEQALEITDTLIRSNAVDILVVDSVAALTPRAEIEGEMGDSHVGLQARLMSQALR 188
Query: 237 KLSHSLSLSQTILIFINQV 255
K++ S++ SQT++IFINQV
Sbjct: 189 KITGSINRSQTLVIFINQV 207
>sp|Q2K7T3|RECA_RHIEC Protein RecA OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=recA
PE=3 SV=1
Length = 362
Score = 258 bits (658), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 125/197 (63%), Positives = 153/197 (77%)
Query: 59 EENMSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPK 118
E+ K AL+ AL QI SFGKGSIM LG + + VSTGS LDIALG GGLPK
Sbjct: 10 EDKSVDKSKALEAALSQIERSFGKGSIMKLGSNENVVEIETVSTGSLGLDIALGIGGLPK 69
Query: 119 GRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQ 178
GR++EIYGPE+SGKTTLAL IAE+Q++GG C F+DAEHALDP A +GV +NLL++Q
Sbjct: 70 GRIIEIYGPESSGKTTLALQTIAESQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQ 129
Query: 179 PDCGEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKL 238
PD GEQAL + DTL+RSG+VDV+VVDSVAAL P+ E++GEMGD+ MQARLMSQALRKL
Sbjct: 130 PDTGEQALEITDTLVRSGAVDVLVVDSVAALTPRAEIEGEMGDSLPGMQARLMSQALRKL 189
Query: 239 SHSLSLSQTILIFINQV 255
+ S+S S ++IFINQ+
Sbjct: 190 TASISKSNCMVIFINQI 206
>sp|B0TII6|RECA_HELMI Protein RecA OS=Heliobacterium modesticaldum (strain ATCC 51547 /
Ice1) GN=recA PE=3 SV=1
Length = 346
Score = 258 bits (658), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 122/188 (64%), Positives = 153/188 (81%)
Query: 68 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 127
ALQQAL+ I +FGKGSIM LG + V V+ TGS ALD+ALG GG+P+GR+VE+YGP
Sbjct: 10 ALQQALNSIEKAFGKGSIMRLGEASAKLLVEVIPTGSIALDMALGIGGVPRGRIVEVYGP 69
Query: 128 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 187
E+SGKTT+ALH+IAEAQ+ GG FIDAEHALDP A +GV +NLL++QPD GEQAL
Sbjct: 70 ESSGKTTVALHIIAEAQKMGGMAAFIDAEHALDPVYARNLGVDIDNLLVSQPDTGEQALE 129
Query: 188 LVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 247
+ + L+RSG++DVVV+DSVAALVPK E+DGEMGDAH+ +QARLMSQALRKL+ +S S+T
Sbjct: 130 ICEALVRSGAIDVVVIDSVAALVPKAEIDGEMGDAHVGLQARLMSQALRKLTGVVSKSKT 189
Query: 248 ILIFINQV 255
+FINQ+
Sbjct: 190 CCLFINQI 197
>sp|B6IS93|RECA_RHOCS Protein RecA OS=Rhodospirillum centenum (strain ATCC 51521 / SW)
GN=recA PE=3 SV=1
Length = 358
Score = 257 bits (657), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 123/191 (64%), Positives = 151/191 (79%)
Query: 65 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 124
K AL AL QI +FGKGSIM LG +STGS LDIALG GGLP+GR+VEI
Sbjct: 15 KQKALDAALGQIERAFGKGSIMKLGAREAMAETEAISTGSLGLDIALGIGGLPRGRIVEI 74
Query: 125 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 184
YGPE+SGKTTLALH IAEAQ+ GG C F+DAEHALDP+ A +GV + LL++QPD GEQ
Sbjct: 75 YGPESSGKTTLALHAIAEAQKAGGTCAFVDAEHALDPAYARKLGVDVDELLISQPDAGEQ 134
Query: 185 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 244
AL + DTL+RSG++DV+VVDSVAALVP+ EL+GEMGD+H+ + ARLMSQALRKL+ S+S
Sbjct: 135 ALEIADTLVRSGAIDVLVVDSVAALVPRAELEGEMGDSHVGLHARLMSQALRKLTGSISK 194
Query: 245 SQTILIFINQV 255
S+ ++IFINQ+
Sbjct: 195 SRCLVIFINQI 205
>sp|P27865|RECA_RHIME Protein RecA OS=Rhizobium meliloti (strain 1021) GN=recA PE=3 SV=1
Length = 348
Score = 257 bits (657), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 124/191 (64%), Positives = 152/191 (79%)
Query: 65 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 124
K AL+ AL QI SFGKGSIM LG + + VSTGS LDIALG GGLPKGR++EI
Sbjct: 3 KSKALEAALSQIERSFGKGSIMKLGAKDSVVEIETVSTGSLGLDIALGIGGLPKGRIIEI 62
Query: 125 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 184
YGPE+SGKTTLAL IAEAQ++GG C F+DAEHALDP A +GV ENLL++QPD GEQ
Sbjct: 63 YGPESSGKTTLALQTIAEAQKKGGICGFVDAEHALDPVYARKLGVDLENLLISQPDTGEQ 122
Query: 185 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 244
AL + DTL+RSG++D++V+DSVAALVP+ E++GEMGD+ MQARLMSQALRKL+ S+S
Sbjct: 123 ALEITDTLVRSGAIDILVIDSVAALVPRAEIEGEMGDSLPGMQARLMSQALRKLTASISK 182
Query: 245 SQTILIFINQV 255
S ++IFINQ+
Sbjct: 183 SNCMVIFINQI 193
>sp|Q1AW43|RECA_RUBXD Protein RecA OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC
16129) GN=recA PE=3 SV=1
Length = 344
Score = 257 bits (657), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 126/191 (65%), Positives = 152/191 (79%), Gaps = 1/191 (0%)
Query: 65 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 124
K AL A+ QI FGKGSIM +G + + V +STGS ALD+ALG GG+P+GR+VEI
Sbjct: 5 KSKALDTAVSQIERQFGKGSIMRMGDRASQK-VASISTGSLALDLALGVGGVPRGRIVEI 63
Query: 125 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 184
+GPE+SGKTTLALH+IAEAQR GG FIDAEHALDP+ AE IGV ENL +QPD GEQ
Sbjct: 64 FGPESSGKTTLALHIIAEAQRAGGLAAFIDAEHALDPTYAEAIGVDLENLYFSQPDSGEQ 123
Query: 185 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 244
AL + DTL+RSG++D VV+DSVAALVP+ E++GEMGD+H+ +QARLMSQALRKLS SLS
Sbjct: 124 ALEIADTLVRSGALDAVVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLSGSLSR 183
Query: 245 SQTILIFINQV 255
S T IFINQ+
Sbjct: 184 SGTTAIFINQL 194
>sp|Q8CXG7|RECA_OCEIH Protein RecA OS=Oceanobacillus iheyensis (strain DSM 14371 / JCM
11309 / KCTC 3954 / HTE831) GN=recA PE=3 SV=1
Length = 347
Score = 257 bits (657), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 122/194 (62%), Positives = 154/194 (79%), Gaps = 1/194 (0%)
Query: 62 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 121
MS + AL AL QI FGKGSIM +G + P+ + + +GS ALD+ALG GG P+GRV
Sbjct: 1 MSDRKQALDMALRQIEKQFGKGSIMKMGENEIPK-IATIPSGSLALDVALGIGGYPRGRV 59
Query: 122 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 181
VEIYGPE+SGKTT+ALH IAEAQ+QGG FIDAEHALDP A+ +GV + LLL+QPD
Sbjct: 60 VEIYGPESSGKTTVALHAIAEAQKQGGQAAFIDAEHALDPVYAKALGVNIDELLLSQPDT 119
Query: 182 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 241
GEQAL + + L+RSG+VD++VVDSVAALVPK E++GEMGD+H+ +QARLMSQALRKLS +
Sbjct: 120 GEQALEIAEALVRSGAVDIIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLSGA 179
Query: 242 LSLSQTILIFINQV 255
++ S+T IFINQ+
Sbjct: 180 INKSKTTAIFINQI 193
>sp|P24074|RECA_RHILV Protein RecA OS=Rhizobium leguminosarum bv. viciae GN=recA PE=3
SV=1
Length = 351
Score = 257 bits (656), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 123/191 (64%), Positives = 150/191 (78%)
Query: 65 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 124
K AL+ AL QI SFGKGSIM LG + + +STGS LDIALG GGLP+GR++EI
Sbjct: 3 KSKALEAALSQIERSFGKGSIMKLGSNENVVEIETISTGSLGLDIALGVGGLPRGRIIEI 62
Query: 125 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 184
YGPE+SGKTTLAL IAEAQ++GG C F+DAEHALDP A +GV +NLL++QPD GEQ
Sbjct: 63 YGPESSGKTTLALQTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLQNLLISQPDTGEQ 122
Query: 185 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 244
AL + DTL+RSG VDV+VVDSVAAL P+ E++GEMGD +QARLMSQALRKL+ S+S
Sbjct: 123 ALEITDTLVRSGRVDVLVVDSVAALTPRAEIEGEMGDTVPGLQARLMSQALRKLTASISK 182
Query: 245 SQTILIFINQV 255
S T++IFINQ+
Sbjct: 183 SNTMVIFINQI 193
>sp|C4L2V3|RECA_EXISA Protein RecA OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b)
GN=recA PE=3 SV=1
Length = 349
Score = 257 bits (656), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 121/194 (62%), Positives = 156/194 (80%), Gaps = 1/194 (0%)
Query: 62 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 121
MS + AL+ AL QI FGKGSIM LG + T + V V+ +GS ALD+ALG GG P+GRV
Sbjct: 1 MSDRKQALEMALRQIEKQFGKGSIMRLGEN-TDQQVSVIPSGSIALDVALGAGGYPRGRV 59
Query: 122 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 181
+E+YGPE+SGKTT+ALH IAE Q++GG F+DAEHALDP A+ +GV + LLL+QPD
Sbjct: 60 IEVYGPESSGKTTVALHAIAEVQKRGGQAAFVDAEHALDPKYAKNLGVNIDELLLSQPDT 119
Query: 182 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 241
GEQAL + + L+RSG+VD++VVDSVAALVPK E++GEMGD+H+ +QARLMSQALRKLS +
Sbjct: 120 GEQALEIAEALVRSGAVDILVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLSGA 179
Query: 242 LSLSQTILIFINQV 255
+ S+TI+IFINQ+
Sbjct: 180 TNKSKTIVIFINQI 193
>sp|Q98NQ6|RECA_RHILO Protein RecA OS=Rhizobium loti (strain MAFF303099) GN=recA PE=3
SV=1
Length = 365
Score = 257 bits (656), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 123/197 (62%), Positives = 153/197 (77%)
Query: 59 EENMSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPK 118
E+ K AL AL QI +FGKGSIM LG + + V TGS LDIALG GGLP+
Sbjct: 10 EDKAVDKSKALDAALSQIERAFGKGSIMRLGANEQVVEIETVPTGSLGLDIALGVGGLPR 69
Query: 119 GRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQ 178
GR++EIYGPE+SGKTTLALH +AEAQ++GG C F+DAEHALDP A +GV ENLL++Q
Sbjct: 70 GRIIEIYGPESSGKTTLALHTVAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQ 129
Query: 179 PDCGEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKL 238
PD GEQAL + DTL+RSG++DV+VVDSVAAL P+ E++GEMGD+ +QARLMSQALRKL
Sbjct: 130 PDTGEQALEICDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKL 189
Query: 239 SHSLSLSQTILIFINQV 255
+ S+S S T++IFINQ+
Sbjct: 190 TASISRSNTMVIFINQI 206
>sp|Q83TH4|RECA_LISSE Protein RecA OS=Listeria seeligeri GN=recA PE=3 SV=1
Length = 348
Score = 256 bits (655), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 120/194 (61%), Positives = 156/194 (80%), Gaps = 1/194 (0%)
Query: 62 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 121
M+ + AL QAL QI FGKGSIM LG + +++ +S+GS ALDIALG GG P+GR+
Sbjct: 1 MNDRQAALDQALKQIEKQFGKGSIMKLGEH-SDQNISTISSGSLALDIALGVGGYPRGRI 59
Query: 122 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 181
+E+YGPE+SGKTT+ALH IAE Q QGG FIDAEHALDP+ A+ +GV + LLL+QPD
Sbjct: 60 IEVYGPESSGKTTVALHAIAEVQAQGGTAAFIDAEHALDPAYAKNLGVNIDELLLSQPDT 119
Query: 182 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 241
GEQAL + + L+RSG+VD++V+DSVAALVP+ E++GEMGDAH+ +QARLMSQALRKLS +
Sbjct: 120 GEQALEIAEALVRSGAVDMLVIDSVAALVPRAEIEGEMGDAHVGLQARLMSQALRKLSGA 179
Query: 242 LSLSQTILIFINQV 255
++ S+TI IFINQ+
Sbjct: 180 INKSKTIAIFINQI 193
>sp|B1LWT6|RECA_METRJ Protein RecA OS=Methylobacterium radiotolerans (strain ATCC 27329 /
DSM 1819 / JCM 2831) GN=recA PE=3 SV=1
Length = 363
Score = 256 bits (655), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 122/191 (63%), Positives = 153/191 (80%)
Query: 65 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 124
K A+ AL QI +FGKGSIM LG+S + V VSTGS LDIALG GGLP+GRV+EI
Sbjct: 18 KSKAIDAALSQIERAFGKGSIMRLGKSDKVQEVETVSTGSLGLDIALGVGGLPRGRVIEI 77
Query: 125 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 184
YGPE+SGKTTLALH IAEAQ++GG C F+DAEHALDP A +GV ++LL++QPD GEQ
Sbjct: 78 YGPESSGKTTLALHTIAEAQKKGGVCAFVDAEHALDPVYARKLGVNLDDLLISQPDTGEQ 137
Query: 185 ALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 244
AL + DTL+RSG++DV+VVDSVAAL P+ E++GEMG++ +QARLMSQALRKL+ S+S
Sbjct: 138 ALEITDTLVRSGAIDVLVVDSVAALTPRAEIEGEMGESQPGLQARLMSQALRKLTGSISR 197
Query: 245 SQTILIFINQV 255
S ++IFINQ+
Sbjct: 198 SNCMVIFINQI 208
>sp|Q60BS8|RECA_METCA Protein RecA OS=Methylococcus capsulatus (strain ATCC 33009 / NCIMB
11132 / Bath) GN=recA PE=3 SV=1
Length = 347
Score = 256 bits (655), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 125/197 (63%), Positives = 152/197 (77%), Gaps = 3/197 (1%)
Query: 59 EENMSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPK 118
+EN K AL AL QI FGKGS+M +G R + V+ TGS ALDIALG GGLP+
Sbjct: 2 DENKRK---ALGAALSQIEKQFGKGSVMRMGDVAAVRDIDVIPTGSLALDIALGCGGLPR 58
Query: 119 GRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQ 178
GR+VEIYGPE+SGKTTL L VIA+AQ+ GG F+DAEHALDP AE IGV ++LL++Q
Sbjct: 59 GRIVEIYGPESSGKTTLTLEVIAQAQKTGGVAAFVDAEHALDPVYAEKIGVNLDDLLVSQ 118
Query: 179 PDCGEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKL 238
PD GEQAL + D L+RSG VDVVV+DSVAAL PK EL+GEMGD+HM +QARLMSQALRKL
Sbjct: 119 PDTGEQALEIADVLVRSGGVDVVVIDSVAALTPKAELEGEMGDSHMGLQARLMSQALRKL 178
Query: 239 SHSLSLSQTILIFINQV 255
+ ++ S T++IFINQ+
Sbjct: 179 TANIKRSNTLVIFINQI 195
>sp|A7HWA4|RECA_PARL1 Protein RecA OS=Parvibaculum lavamentivorans (strain DS-1 / DSM
13023 / NCIMB 13966) GN=recA PE=3 SV=1
Length = 365
Score = 256 bits (655), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 124/193 (64%), Positives = 153/193 (79%)
Query: 63 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVV 122
S K AL AL QI SFGKGSIM LG++ + VSTGS LDIALG GGLP+GR++
Sbjct: 13 SDKKKALDAALSQIERSFGKGSIMRLGKNEQIVEIESVSTGSLGLDIALGIGGLPRGRII 72
Query: 123 EIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCG 182
EIYGPE+SGKTTLAL +AEAQ+ GG C F+DAEHALDP A +GV+ ++LL++QPD G
Sbjct: 73 EIYGPESSGKTTLALQTVAEAQKSGGVCAFVDAEHALDPIYARKLGVQLDDLLISQPDTG 132
Query: 183 EQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSL 242
EQAL + DTL+RSG+VDV+V+DSVAAL PK EL+GEMGD+ +QARLMSQALRKL+ S+
Sbjct: 133 EQALEIADTLVRSGAVDVLVIDSVAALTPKAELEGEMGDSLPGLQARLMSQALRKLTGSI 192
Query: 243 SLSQTILIFINQV 255
S S T++IFINQ+
Sbjct: 193 SKSNTMVIFINQI 205
>sp|Q83TH3|RECA_LISWE Protein RecA OS=Listeria welshimeri GN=recA PE=3 SV=1
Length = 348
Score = 256 bits (655), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 120/194 (61%), Positives = 156/194 (80%), Gaps = 1/194 (0%)
Query: 62 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 121
M+ + AL QAL QI FGKGSIM LG + +++ +S+GS ALDIALG GG P+GR+
Sbjct: 1 MNDRQAALDQALKQIEKQFGKGSIMKLGEH-SDQNISTISSGSLALDIALGVGGYPRGRI 59
Query: 122 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 181
+E+YGPE+SGKTT+ALH IAE Q QGG FIDAEHALDP+ A+ +GV + LLL+QPD
Sbjct: 60 IEVYGPESSGKTTVALHAIAEVQAQGGTAAFIDAEHALDPAYAKNLGVNIDELLLSQPDT 119
Query: 182 GEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 241
GEQAL + + L+RSG+VD++V+DSVAALVP+ E++GEMGDAH+ +QARLMSQALRKLS +
Sbjct: 120 GEQALEIAEALVRSGAVDMLVIDSVAALVPRAEIEGEMGDAHVGLQARLMSQALRKLSGA 179
Query: 242 LSLSQTILIFINQV 255
++ S+TI IFINQ+
Sbjct: 180 INKSKTIAIFINQI 193
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.131 0.367
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,907,707
Number of Sequences: 539616
Number of extensions: 3825541
Number of successful extensions: 20685
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 704
Number of HSP's successfully gapped in prelim test: 261
Number of HSP's that attempted gapping in prelim test: 19427
Number of HSP's gapped (non-prelim): 1003
length of query: 271
length of database: 191,569,459
effective HSP length: 116
effective length of query: 155
effective length of database: 128,974,003
effective search space: 19990970465
effective search space used: 19990970465
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)