BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024153
(271 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FWR5|GCA1_ARATH Gamma carbonic anhydrase 1, mitochondrial OS=Arabidopsis thaliana
GN=GAMMACA1 PE=1 SV=1
Length = 275
Score = 476 bits (1224), Expect = e-133, Method: Compositional matrix adjust.
Identities = 221/269 (82%), Positives = 247/269 (91%)
Query: 1 MGTLGKAIYSVGFWIRETGQALDRLGCRLQGNYYFQEQLSRHRTLMNIFDKAPVVNKDVF 60
MGTLG+A YSVGFWIRETGQALDRLGCRLQG YF+EQLSRHRTLMN+FDKAP+V+K+ F
Sbjct: 1 MGTLGRAFYSVGFWIRETGQALDRLGCRLQGKNYFREQLSRHRTLMNVFDKAPIVDKEAF 60
Query: 61 LAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSNLAGKVLPT 120
+APSAS+IGDV +GRGSSIWYGCVLRGDVN++S+GSGTNIQDNSLVHVAKSNL+GKV PT
Sbjct: 61 VAPSASVIGDVHIGRGSSIWYGCVLRGDVNTVSVGSGTNIQDNSLVHVAKSNLSGKVHPT 120
Query: 121 IIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVYVEKHAMVAAGALVRQNTKIPCGEV 180
IIGDNVT+GHSAVLHGCTVEDE F+GMGATLLDGV VEKH MVAAGALVRQNT+IP GEV
Sbjct: 121 IIGDNVTIGHSAVLHGCTVEDETFIGMGATLLDGVVVEKHGMVAAGALVRQNTRIPSGEV 180
Query: 181 WGGNPARFLRKLTEEEMAFISQSAINYSNLARVHAAENAKSFDEIEFEKLLRKKFARRDE 240
WGGNPARFLRKLT+EE+AFISQSA NYSNLA+ HAAENAK + IEFEK+LRKK A +DE
Sbjct: 181 WGGNPARFLRKLTDEEIAFISQSATNYSNLAQAHAAENAKPLNVIEFEKVLRKKHALKDE 240
Query: 241 EYDSMLGVVRETPAELILPDNVMQDKVPK 269
EYDSMLG+VRETP EL LP+N++ DK K
Sbjct: 241 EYDSMLGIVRETPPELNLPNNILPDKETK 269
>sp|Q9C6B3|GCA2_ARATH Gamma carbonic anhydrase 2, mitochondrial OS=Arabidopsis thaliana
GN=GAMMACA2 PE=1 SV=1
Length = 278
Score = 453 bits (1166), Expect = e-127, Method: Compositional matrix adjust.
Identities = 208/275 (75%), Positives = 251/275 (91%), Gaps = 5/275 (1%)
Query: 1 MGTLGKAIYSVGFWIRETGQALDRLGCRLQGNYYFQEQLSRHRTLMNIFDKAPVVNKDVF 60
MGTLG+AIY+VG WIR TGQALDR+G LQG++ +E LSRHRTLMN+FDK+P+V+KDVF
Sbjct: 1 MGTLGRAIYTVGNWIRGTGQALDRVGSLLQGSHRIEEHLSRHRTLMNVFDKSPLVDKDVF 60
Query: 61 LAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSNLAGKVLPT 120
+APSAS+IGDVQ+G+GSSIWYGCVLRGDVN+IS+GSGTNIQDN+LVHVAK+N++GKVLPT
Sbjct: 61 VAPSASVIGDVQIGKGSSIWYGCVLRGDVNNISVGSGTNIQDNTLVHVAKTNISGKVLPT 120
Query: 121 IIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVYVEKHAMVAAGALVRQNTKIPCGEV 180
+IGDNVTVGHSAV+HGCTVED+AFVGMGATLLDGV VEKHAMVAAG+LV+QNT+IP GEV
Sbjct: 121 LIGDNVTVGHSAVIHGCTVEDDAFVGMGATLLDGVVVEKHAMVAAGSLVKQNTRIPSGEV 180
Query: 181 WGGNPARFLRKLTEEEMAFISQSAINYSNLARVHAAENAKSFDEIEFEKLLRKKFARRDE 240
WGGNPA+F+RKLT+EE+ +ISQSA NY NLA++HA+EN+KSF++IE E+ LRKK+AR+DE
Sbjct: 181 WGGNPAKFMRKLTDEEIVYISQSAKNYINLAQIHASENSKSFEQIEVERALRKKYARKDE 240
Query: 241 EYDSMLGVVRETPAELILPDNVMQD-----KVPKT 270
+YDSMLG+ RETP ELILPDNV+ KVP T
Sbjct: 241 DYDSMLGITRETPPELILPDNVLPGGKPVAKVPST 275
>sp|Q94AU7|GCA3_ARATH Gamma carbonic anhydrase 3, mitochondrial OS=Arabidopsis thaliana
GN=GAMMACA3 PE=1 SV=1
Length = 258
Score = 417 bits (1071), Expect = e-116, Method: Compositional matrix adjust.
Identities = 199/271 (73%), Positives = 229/271 (84%), Gaps = 13/271 (4%)
Query: 1 MGTLGKAIYSVGFWIRETGQALDRLGCRLQGNYYFQEQLSRHRTLMNIFDKAPVVNKDVF 60
MGT+GKA YSVGFWIRETGQALDRLGCRLQG +F+EQLSRHRTLMN+FDK P V+K F
Sbjct: 1 MGTMGKAFYSVGFWIRETGQALDRLGCRLQGKNHFREQLSRHRTLMNVFDKTPNVDKGAF 60
Query: 61 LAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSNLAGKVLPT 120
+AP+AS+ GDV VGRGSSIWYGCVLRGD NSIS+G+GTNIQDN+LVHVAK+NL+GKVLPT
Sbjct: 61 VAPNASLSGDVHVGRGSSIWYGCVLRGDANSISVGAGTNIQDNALVHVAKTNLSGKVLPT 120
Query: 121 IIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVYVEKHAMVAAGALVRQNTKIPCGEV 180
+IGDNVT+GHSAVLHGCTVEDEA++G AT+LDG +VEKHAMVA+GALVRQNT+IP GEV
Sbjct: 121 VIGDNVTIGHSAVLHGCTVEDEAYIGTSATVLDGAHVEKHAMVASGALVRQNTRIPSGEV 180
Query: 181 WGGNPARFLRKLTEEEMAFISQSAINYSNLARVHAAENAKSFDEIEFEKLLRKKFARRDE 240
WGGNPA+FLRK+TEEE F S SA+ YSNLA+ HA ENAK+ DE EF+KLL KK A RD
Sbjct: 181 WGGNPAKFLRKVTEEERVFFSSSAVEYSNLAQAHATENAKNLDEAEFKKLLNKKNA-RDT 239
Query: 241 EYDSMLGVVRETPAELILPDNVMQDKVPKTA 271
EYDS+L +L LP+N VPK A
Sbjct: 240 EYDSVLD-------DLTLPEN-----VPKAA 258
>sp|Q54JC2|Y2881_DICDI Uncharacterized protein DDB_G0288155 OS=Dictyostelium discoideum
GN=DDB_G0288155 PE=1 SV=1
Length = 246
Score = 189 bits (479), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 95/236 (40%), Positives = 147/236 (62%), Gaps = 3/236 (1%)
Query: 11 VGFWIRETGQALDRLGCRLQGNYYFQEQLSRHRTLMNIFDKAPVVNKDVFLAPSASIIGD 70
+G ++ TG L R GC++QG+Y + E+L+RH L D AP+V + F+AP+ASIIGD
Sbjct: 10 LGEVVKNTGLILHRTGCKMQGDYAYVEKLNRHTRLTAFGDNAPIVGQKSFIAPNASIIGD 69
Query: 71 VQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSNLAGKVLPTIIGDNVTVGH 130
V +G+ SSIWY VLRGDVNSI IG T + D ++VH + + G PT IGD V +G
Sbjct: 70 VVIGKESSIWYNAVLRGDVNSIHIGDKTVVSDRTVVHCSSNGPLGP-KPTQIGDKVYIGP 128
Query: 131 SAVLHGCTVEDEAFVGMGATLLDGVYVEKHAMVAAGALVRQNTKIPCGEVWGGNPARFLR 190
+++H T+ E+F+G G+TL DG VEK+ + AG+L+ I GE WGG+PA+F+R
Sbjct: 129 GSIVHAATILGESFIGTGSTLCDGSVVEKNGFLEAGSLLTAGKTIKSGEYWGGSPAKFIR 188
Query: 191 KLTEEEMAFISQSAINYSNLARVHAAENAKSFDEIEFEKLLRKKFARRDEEYDSML 246
++T+++ + + + NL+ H + +KS E+ + L +K+ + D +L
Sbjct: 189 QVTKDDESQLEKIIEQNINLSEQHEKQTSKSAKELNND--LLQKYVKNRTRSDHIL 242
>sp|Q57752|Y304_METJA Uncharacterized protein MJ0304 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0304 PE=3 SV=1
Length = 159
Score = 144 bits (364), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 72/159 (45%), Positives = 106/159 (66%), Gaps = 6/159 (3%)
Query: 54 VVNKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSNL 113
+++K+V +A A I+GDV +G SS+WY V+RGDV+ I IG+ +NIQD +VH +K
Sbjct: 1 MISKNVRIAKGAVIVGDVTIGDYSSVWYNAVIRGDVDKIIIGNYSNIQDCCVVHCSKG-- 58
Query: 114 AGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVYVEKHAMVAAGALVRQNT 173
PTIIGD V++GH AV+HGC +ED VGM AT+L+G + ++ ++ A ALV QN
Sbjct: 59 ----YPTIIGDYVSIGHGAVIHGCRIEDNVLVGMNATILNGAKIGENCIIGANALVTQNK 114
Query: 174 KIPCGEVWGGNPARFLRKLTEEEMAFISQSAINYSNLAR 212
+IP + G P R +R+LTEEE+ I ++A+ Y L+
Sbjct: 115 EIPPNSLVLGVPGRVVRELTEEEIKSIKENALRYVKLSE 153
>sp|Q9FMV1|GCAL1_ARATH Gamma carbonic anhydrase-like 1, mitochondrial OS=Arabidopsis
thaliana GN=GAMMACAL1 PE=1 SV=1
Length = 252
Score = 139 bits (350), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 105/170 (61%)
Query: 42 HRTLMNIFDKAPVVNKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQ 101
R ++ + P V D ++AP+ + G V V GSS+W G VLRGD+N I++G +N+Q
Sbjct: 55 QRQIIPLGQWLPKVAVDAYVAPNVVLAGQVTVWDGSSVWNGAVLRGDLNKITVGFCSNVQ 114
Query: 102 DNSLVHVAKSNLAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVYVEKHA 161
+ +VH A S+ G TII VTVG ++L CT+E E +G + L++G VE +
Sbjct: 115 ERCVVHAAWSSPTGLPAATIIDRYVTVGAYSLLRSCTIEPECIIGQHSILMEGSLVETRS 174
Query: 162 MVAAGALVRQNTKIPCGEVWGGNPARFLRKLTEEEMAFISQSAINYSNLA 211
++ AG++V +IP GE+WGGNPARF+R LT EE I + A+ ++L+
Sbjct: 175 ILEAGSVVPPGRRIPSGELWGGNPARFIRTLTNEETLEIPKLAVAINHLS 224
>sp|Q9SMN1|GCAL2_ARATH Gamma carbonic anhydrase-like 2, mitochondrial OS=Arabidopsis
thaliana GN=GAMMACAL2 PE=1 SV=1
Length = 256
Score = 137 bits (344), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/170 (39%), Positives = 105/170 (61%)
Query: 42 HRTLMNIFDKAPVVNKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQ 101
R ++ + P V D ++AP+ + G V V GSS+W G VLRGD+N I++G +N+Q
Sbjct: 59 QRQIIPLGQWLPKVAVDAYVAPNVVLAGQVTVWDGSSVWNGAVLRGDLNKITVGFCSNVQ 118
Query: 102 DNSLVHVAKSNLAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVYVEKHA 161
+ +VH A S+ G T+I VTVG ++L CT+E E +G + L++G VE +
Sbjct: 119 ERCVVHAAWSSPTGLPAQTLIDRYVTVGAYSLLRSCTIEPECIIGQHSILMEGSLVETRS 178
Query: 162 MVAAGALVRQNTKIPCGEVWGGNPARFLRKLTEEEMAFISQSAINYSNLA 211
++ AG+++ +IP GE+WGGNPARF+R LT EE I + A+ ++L+
Sbjct: 179 ILEAGSVLPPGRRIPSGELWGGNPARFIRTLTNEETLEIPKLAVAINHLS 228
>sp|P0A9X0|YRDA_SHIFL Protein YrdA OS=Shigella flexneri GN=yrdA PE=3 SV=1
Length = 184
Score = 133 bits (334), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/159 (43%), Positives = 101/159 (63%), Gaps = 1/159 (0%)
Query: 50 DKAPVVNKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVA 109
D P + + V + S+ +IGDV++ IW V+RGDV+ + IG+ TNIQD S++HV
Sbjct: 10 DLFPQIGQRVMIDDSSVVIGDVRLADDVGIWPLVVIRGDVHYVQIGARTNIQDGSMLHVT 69
Query: 110 -KSNLAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVYVEKHAMVAAGAL 168
KS+ P IG++VTVGH +LHGCT+ + VGMG+ LLDG VE M+ AG+L
Sbjct: 70 HKSSYNPDGNPLTIGEDVTVGHKVMLHGCTIGNRVLVGMGSILLDGAIVEDDVMIGAGSL 129
Query: 169 VRQNTKIPCGEVWGGNPARFLRKLTEEEMAFISQSAINY 207
V QN ++ G ++ G+P + +R L++EE A + SA NY
Sbjct: 130 VPQNKRLESGYLYLGSPVKQIRPLSDEEKAGLRYSANNY 168
>sp|P0A9W9|YRDA_ECOLI Protein YrdA OS=Escherichia coli (strain K12) GN=yrdA PE=1 SV=1
Length = 184
Score = 133 bits (334), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/159 (43%), Positives = 101/159 (63%), Gaps = 1/159 (0%)
Query: 50 DKAPVVNKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVA 109
D P + + V + S+ +IGDV++ IW V+RGDV+ + IG+ TNIQD S++HV
Sbjct: 10 DLFPQIGQRVMIDDSSVVIGDVRLADDVGIWPLVVIRGDVHYVQIGARTNIQDGSMLHVT 69
Query: 110 -KSNLAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVYVEKHAMVAAGAL 168
KS+ P IG++VTVGH +LHGCT+ + VGMG+ LLDG VE M+ AG+L
Sbjct: 70 HKSSYNPDGNPLTIGEDVTVGHKVMLHGCTIGNRVLVGMGSILLDGAIVEDDVMIGAGSL 129
Query: 169 VRQNTKIPCGEVWGGNPARFLRKLTEEEMAFISQSAINY 207
V QN ++ G ++ G+P + +R L++EE A + SA NY
Sbjct: 130 VPQNKRLESGYLYLGSPVKQIRPLSDEEKAGLRYSANNY 168
>sp|P40882|Y3753_PSEAE Uncharacterized protein PA3753 OS=Pseudomonas aeruginosa (strain
ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=PA3753
PE=3 SV=2
Length = 174
Score = 126 bits (316), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 102/160 (63%), Gaps = 6/160 (3%)
Query: 56 NKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSNLAG 115
+ D ++APSA++IG V++ G+S+W+G VLRGD I IG +N+QD S++H
Sbjct: 13 HPDSWIAPSAAVIGKVRLDAGASVWFGAVLRGDNELIHIGEHSNVQDGSVMHTDMG---- 68
Query: 116 KVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVYVEKHAMVAAGALVRQNTKI 175
P +G VTVGH+A+LHGC+V D + VG+ A +L+G + K+ ++ A AL+ + +I
Sbjct: 69 --YPLTLGKGVTVGHNAMLHGCSVGDYSLVGINAVILNGAKIGKYCIIGANALIPEGKEI 126
Query: 176 PCGEVWGGNPARFLRKLTEEEMAFISQSAINYSNLARVHA 215
P G + G+P + +R+L+E + + SA +Y + AR +A
Sbjct: 127 PDGSLVMGSPGKVVRELSEPQKKMLEASAAHYVHNARRYA 166
>sp|P77181|PAAY_ECOLI Phenylacetic acid degradation protein PaaY OS=Escherichia coli
(strain K12) GN=paaY PE=3 SV=1
Length = 196
Score = 114 bits (284), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 106/191 (55%), Gaps = 15/191 (7%)
Query: 53 PVVNKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSN 112
PVV ++ F+ P+A +IGDV +G+G + LRGD I + G NIQDN ++H
Sbjct: 11 PVVPEESFVHPTAVLIGDVILGKGVYVGPNASLRGDFGRIVVKDGANIQDNCVMHGFPEQ 70
Query: 113 LAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVYVEKHAMVAAGALVRQN 172
T++G++ +GHSA+LHGC + A VGM A ++DG + ++++V A A V+
Sbjct: 71 ------DTVVGEDGHIGHSAILHGCIIRRNALVGMNAVVMDGAVIGENSIVGASAFVKAK 124
Query: 173 TKIPCGEVWGGNPARFLRKLTEEEMAFISQSAINYSNLA-----RVHAAENAKSFD---- 223
++P + G+PA+ +R+L+E+E+A+ Q Y L +H E + +
Sbjct: 125 AEMPANYLIVGSPAKAIRELSEQELAWKKQGTHEYQVLVTRCKQTLHQVEPLREIEPGRK 184
Query: 224 EIEFEKLLRKK 234
+ F++ LR K
Sbjct: 185 RLVFDENLRPK 195
>sp|O34696|YTOA_BACSU Uncharacterized transferase YtoA OS=Bacillus subtilis (strain 168)
GN=ytoA PE=3 SV=1
Length = 171
Score = 111 bits (277), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 58/147 (39%), Positives = 86/147 (58%), Gaps = 6/147 (4%)
Query: 50 DKAPVVNKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVA 109
+ P ++ F+A +A+I GDV +G SSIW+ V+RGDV IG+ NIQD S +H +
Sbjct: 7 EHKPDIHPTAFIADNATITGDVVIGEQSSIWFSVVIRGDVAPTRIGNRVNIQDLSCLHQS 66
Query: 110 KSNLAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVYVEKHAMVAAGALV 169
+ K L +I D+ T+GH LH + A +GMG+ +LDG + + A + AG+LV
Sbjct: 67 PN----KTL--LIEDDATIGHQVTLHSAVIRKNALIGMGSIILDGAEIGEGAFIGAGSLV 120
Query: 170 RQNTKIPCGEVWGGNPARFLRKLTEEE 196
IP G + G PA+ +R LTEE+
Sbjct: 121 PPGKIIPPGHLAFGRPAKVIRPLTEED 147
>sp|B5F748|CAIE_SALA4 Carnitine operon protein CaiE OS=Salmonella agona (strain SL483)
GN=caiE PE=3 SV=1
Length = 198
Score = 103 bits (258), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 93/159 (58%), Gaps = 6/159 (3%)
Query: 53 PVVNKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSN 112
PVV+ D F+ PSA +IGDV VG G I LRGD + + +G+N+QD ++H
Sbjct: 11 PVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGSNLQDGCIMHGYCDT 70
Query: 113 LAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVYVEKHAMVAAGALVRQN 172
TI+ +N +GH A+LHGC V +A VGM + ++DG + + ++VAA + V+
Sbjct: 71 ------DTIVHENGHIGHGAILHGCVVGRDALVGMNSVIMDGAMIGEESIVAAMSFVKAG 124
Query: 173 TKIPCGEVWGGNPARFLRKLTEEEMAFISQSAINYSNLA 211
+ ++ G+PAR LR++T++E+ + + Y +LA
Sbjct: 125 FQGEARQLLVGSPARVLRQVTDQELHWKRLNTKEYQDLA 163
>sp|B4TWR2|CAIE_SALSV Carnitine operon protein CaiE OS=Salmonella schwarzengrund (strain
CVM19633) GN=caiE PE=3 SV=1
Length = 198
Score = 103 bits (257), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 93/159 (58%), Gaps = 6/159 (3%)
Query: 53 PVVNKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSN 112
PVV+ D F+ PSA +IGDV VG G I LRGD + + +G+N+QD ++H
Sbjct: 11 PVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGSNLQDGCIMHGYCDT 70
Query: 113 LAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVYVEKHAMVAAGALVRQN 172
TI+ +N +GH A+LHGC V +A VGM + ++DG + + ++VAA + V+
Sbjct: 71 ------DTIVHENGHIGHGAILHGCVVGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAG 124
Query: 173 TKIPCGEVWGGNPARFLRKLTEEEMAFISQSAINYSNLA 211
+ ++ G+PAR LR++T++E+ + + Y +LA
Sbjct: 125 FQGEARQLLVGSPARVLRQVTDQELHWKRLNTKEYQDLA 163
>sp|B5BL53|CAIE_SALPK Carnitine operon protein CaiE OS=Salmonella paratyphi A (strain
AKU_12601) GN=caiE PE=3 SV=1
Length = 198
Score = 103 bits (257), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 93/159 (58%), Gaps = 6/159 (3%)
Query: 53 PVVNKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSN 112
PVV+ D F+ PSA +IGDV VG G I LRGD + + +G+N+QD ++H
Sbjct: 11 PVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGSNLQDGCIMHGYCDT 70
Query: 113 LAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVYVEKHAMVAAGALVRQN 172
TI+ +N +GH A+LHGC V +A VGM + ++DG + + ++VAA + V+
Sbjct: 71 ------DTIVHENGHIGHGAILHGCVVGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAG 124
Query: 173 TKIPCGEVWGGNPARFLRKLTEEEMAFISQSAINYSNLA 211
+ ++ G+PAR LR++T++E+ + + Y +LA
Sbjct: 125 FQGEARQLLVGSPARVLRQVTDQELHWKRLNTKEYQDLA 163
>sp|C0Q4L1|CAIE_SALPC Carnitine operon protein CaiE OS=Salmonella paratyphi C (strain
RKS4594) GN=caiE PE=3 SV=1
Length = 198
Score = 103 bits (257), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 93/159 (58%), Gaps = 6/159 (3%)
Query: 53 PVVNKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSN 112
PVV+ D F+ PSA +IGDV VG G I LRGD + + +G+N+QD ++H
Sbjct: 11 PVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGSNLQDGCIMHGYCDT 70
Query: 113 LAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVYVEKHAMVAAGALVRQN 172
TI+ +N +GH A+LHGC V +A VGM + ++DG + + ++VAA + V+
Sbjct: 71 ------DTIVHENGHIGHGAILHGCVVGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAG 124
Query: 173 TKIPCGEVWGGNPARFLRKLTEEEMAFISQSAINYSNLA 211
+ ++ G+PAR LR++T++E+ + + Y +LA
Sbjct: 125 FQGEARQLLVGSPARVLRQVTDQELHWKRLNTKEYQDLA 163
>sp|Q5PIL2|CAIE_SALPA Carnitine operon protein CaiE OS=Salmonella paratyphi A (strain
ATCC 9150 / SARB42) GN=caiE PE=3 SV=1
Length = 198
Score = 103 bits (257), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 93/159 (58%), Gaps = 6/159 (3%)
Query: 53 PVVNKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSN 112
PVV+ D F+ PSA +IGDV VG G I LRGD + + +G+N+QD ++H
Sbjct: 11 PVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGSNLQDGCIMHGYCDT 70
Query: 113 LAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVYVEKHAMVAAGALVRQN 172
TI+ +N +GH A+LHGC V +A VGM + ++DG + + ++VAA + V+
Sbjct: 71 ------DTIVHENGHIGHGAILHGCVVGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAG 124
Query: 173 TKIPCGEVWGGNPARFLRKLTEEEMAFISQSAINYSNLA 211
+ ++ G+PAR LR++T++E+ + + Y +LA
Sbjct: 125 FQGEARQLLVGSPARVLRQVTDQELHWKRLNTKEYQDLA 163
>sp|B4T6J4|CAIE_SALNS Carnitine operon protein CaiE OS=Salmonella newport (strain SL254)
GN=caiE PE=3 SV=1
Length = 198
Score = 103 bits (257), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 93/159 (58%), Gaps = 6/159 (3%)
Query: 53 PVVNKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSN 112
PVV+ D F+ PSA +IGDV VG G I LRGD + + +G+N+QD ++H
Sbjct: 11 PVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGSNLQDGCIMHGYCDT 70
Query: 113 LAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVYVEKHAMVAAGALVRQN 172
TI+ +N +GH A+LHGC V +A VGM + ++DG + + ++VAA + V+
Sbjct: 71 ------DTIVHENGHIGHGAILHGCVVGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAG 124
Query: 173 TKIPCGEVWGGNPARFLRKLTEEEMAFISQSAINYSNLA 211
+ ++ G+PAR LR++T++E+ + + Y +LA
Sbjct: 125 FQGEARQLLVGSPARVLRQVTDQELHWKRLNTKEYQDLA 163
>sp|B4TIG8|CAIE_SALHS Carnitine operon protein CaiE OS=Salmonella heidelberg (strain
SL476) GN=caiE PE=3 SV=1
Length = 198
Score = 103 bits (257), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 93/159 (58%), Gaps = 6/159 (3%)
Query: 53 PVVNKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSN 112
PVV+ D F+ PSA +IGDV VG G I LRGD + + +G+N+QD ++H
Sbjct: 11 PVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGSNLQDGCIMHGYCDT 70
Query: 113 LAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVYVEKHAMVAAGALVRQN 172
TI+ +N +GH A+LHGC V +A VGM + ++DG + + ++VAA + V+
Sbjct: 71 ------DTIVHENGHIGHGAILHGCVVGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAG 124
Query: 173 TKIPCGEVWGGNPARFLRKLTEEEMAFISQSAINYSNLA 211
+ ++ G+PAR LR++T++E+ + + Y +LA
Sbjct: 125 FQGEARQLLVGSPARVLRQVTDQELHWKRLNTKEYQDLA 163
>sp|B5RGA3|CAIE_SALG2 Carnitine operon protein CaiE OS=Salmonella gallinarum (strain
287/91 / NCTC 13346) GN=caiE PE=3 SV=1
Length = 198
Score = 103 bits (257), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 93/159 (58%), Gaps = 6/159 (3%)
Query: 53 PVVNKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSN 112
PVV+ D F+ PSA +IGDV VG G I LRGD + + +G+N+QD ++H
Sbjct: 11 PVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGSNLQDGCIMHGYCDT 70
Query: 113 LAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVYVEKHAMVAAGALVRQN 172
TI+ +N +GH A+LHGC V +A VGM + ++DG + + ++VAA + V+
Sbjct: 71 ------DTIVHENGHIGHGAILHGCVVGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAG 124
Query: 173 TKIPCGEVWGGNPARFLRKLTEEEMAFISQSAINYSNLA 211
+ ++ G+PAR LR++T++E+ + + Y +LA
Sbjct: 125 FQGEARQLLVGSPARVLRQVTDQELHWKRLNTKEYQDLA 163
>sp|B5R1Q8|CAIE_SALEP Carnitine operon protein CaiE OS=Salmonella enteritidis PT4 (strain
P125109) GN=caiE PE=3 SV=1
Length = 198
Score = 103 bits (257), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 93/159 (58%), Gaps = 6/159 (3%)
Query: 53 PVVNKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSN 112
PVV+ D F+ PSA +IGDV VG G I LRGD + + +G+N+QD ++H
Sbjct: 11 PVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGSNLQDGCIMHGYCDT 70
Query: 113 LAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVYVEKHAMVAAGALVRQN 172
TI+ +N +GH A+LHGC V +A VGM + ++DG + + ++VAA + V+
Sbjct: 71 ------DTIVHENGHIGHGAILHGCVVGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAG 124
Query: 173 TKIPCGEVWGGNPARFLRKLTEEEMAFISQSAINYSNLA 211
+ ++ G+PAR LR++T++E+ + + Y +LA
Sbjct: 125 FQGEARQLLVGSPARVLRQVTDQELHWKRLNTKEYQDLA 163
>sp|B5FHG3|CAIE_SALDC Carnitine operon protein CaiE OS=Salmonella dublin (strain
CT_02021853) GN=caiE PE=3 SV=1
Length = 198
Score = 103 bits (257), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 93/159 (58%), Gaps = 6/159 (3%)
Query: 53 PVVNKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSN 112
PVV+ D F+ PSA +IGDV VG G I LRGD + + +G+N+QD ++H
Sbjct: 11 PVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGSNLQDGCIMHGYCDT 70
Query: 113 LAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVYVEKHAMVAAGALVRQN 172
TI+ +N +GH A+LHGC V +A VGM + ++DG + + ++VAA + V+
Sbjct: 71 ------DTIVHENGHIGHGAILHGCVVGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAG 124
Query: 173 TKIPCGEVWGGNPARFLRKLTEEEMAFISQSAINYSNLA 211
+ ++ G+PAR LR++T++E+ + + Y +LA
Sbjct: 125 FQGEARQLLVGSPARVLRQVTDQELHWKRLNTKEYQDLA 163
>sp|Q8Z9L6|CAIE_SALTI Carnitine operon protein CaiE OS=Salmonella typhi GN=caiE PE=3 SV=1
Length = 198
Score = 103 bits (257), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 93/159 (58%), Gaps = 6/159 (3%)
Query: 53 PVVNKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSN 112
PVV+ D F+ PSA +IGDV VG G I LRGD + + +G+N+QD ++H
Sbjct: 11 PVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGSNLQDGCIMHGYCDT 70
Query: 113 LAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVYVEKHAMVAAGALVRQN 172
TI+ +N +GH A+LHGC V +A VGM + ++DG + + ++VAA + V+
Sbjct: 71 ------DTIVHENGHIGHGAILHGCVVGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAG 124
Query: 173 TKIPCGEVWGGNPARFLRKLTEEEMAFISQSAINYSNLA 211
+ ++ G+PAR LR++T++E+ + + Y +LA
Sbjct: 125 FQGEARQLLVGSPARVLRQVTDQELYWKRLNTKEYQDLA 163
>sp|Q8ZRX6|CAIE_SALTY Carnitine operon protein CaiE OS=Salmonella typhimurium (strain LT2
/ SGSC1412 / ATCC 700720) GN=caiE PE=3 SV=1
Length = 198
Score = 103 bits (257), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 93/159 (58%), Gaps = 6/159 (3%)
Query: 53 PVVNKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSN 112
PVV+ D F+ PSA +IGDV VG G I LRGD + + +G+N+QD ++H
Sbjct: 11 PVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGSNLQDGCIMHGYCDT 70
Query: 113 LAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVYVEKHAMVAAGALVRQN 172
TI+ +N +GH A+LHGC V +A VGM + ++DG + + ++VAA + V+
Sbjct: 71 ------DTIVHENGHIGHGAILHGCVVGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAG 124
Query: 173 TKIPCGEVWGGNPARFLRKLTEEEMAFISQSAINYSNLA 211
+ ++ G+PAR LR++T++E+ + + Y +LA
Sbjct: 125 FQGEARQLLVGSPARVLRQVTDQELHWKHLNTKEYQDLA 163
>sp|Q57TJ2|CAIE_SALCH Carnitine operon protein CaiE OS=Salmonella choleraesuis (strain
SC-B67) GN=caiE PE=3 SV=1
Length = 198
Score = 102 bits (253), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 92/159 (57%), Gaps = 6/159 (3%)
Query: 53 PVVNKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSN 112
PVV+ D F+ PSA +IGDV VG G I LRGD + +G+N+QD ++H
Sbjct: 11 PVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRQILEAGSNLQDGCIMHGYCDT 70
Query: 113 LAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVYVEKHAMVAAGALVRQN 172
TI+ +N +GH A+LHGC V +A VGM + ++DG + + ++VAA + V+
Sbjct: 71 ------DTIVHENGHIGHGAILHGCVVGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAG 124
Query: 173 TKIPCGEVWGGNPARFLRKLTEEEMAFISQSAINYSNLA 211
+ ++ G+PAR LR++T++E+ + + Y +LA
Sbjct: 125 FQGEARQLLVGSPARVLRQVTDQELHWKRLNTKEYQDLA 163
>sp|Q1RGG3|CAIE_ECOUT Carnitine operon protein CaiE OS=Escherichia coli (strain UTI89 /
UPEC) GN=caiE PE=3 SV=2
Length = 196
Score = 101 bits (252), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 93/165 (56%), Gaps = 7/165 (4%)
Query: 53 PVVNKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSN 112
PVV+ F+ PSA +IGDV VG G I LRGD + + +G NIQD ++H
Sbjct: 11 PVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDT 70
Query: 113 LAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVYVEKHAMVAAGALVRQN 172
TI+G+N +GH A+LHGC + +A VGM + ++DG + + ++VAA + V+
Sbjct: 71 ------DTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAG 124
Query: 173 TKIPCGEVWGGNPARFLRKLTEEEMAFISQSAINYSNL-ARVHAA 216
+ ++ G PAR +R ++++E+ + + Y +L R HAA
Sbjct: 125 FRGEKRQLLMGTPARAVRSVSDDELHWKRLNTKEYQDLVGRCHAA 169
>sp|Q8FLA7|CAIE_ECOL6 Carnitine operon protein CaiE OS=Escherichia coli O6:H1 (strain
CFT073 / ATCC 700928 / UPEC) GN=caiE PE=3 SV=2
Length = 196
Score = 101 bits (252), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 93/165 (56%), Gaps = 7/165 (4%)
Query: 53 PVVNKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSN 112
PVV+ F+ PSA +IGDV VG G I LRGD + + +G NIQD ++H
Sbjct: 11 PVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDT 70
Query: 113 LAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVYVEKHAMVAAGALVRQN 172
TI+G+N +GH A+LHGC + +A VGM + ++DG + + ++VAA + V+
Sbjct: 71 ------DTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAG 124
Query: 173 TKIPCGEVWGGNPARFLRKLTEEEMAFISQSAINYSNL-ARVHAA 216
+ ++ G PAR +R ++++E+ + + Y +L R HAA
Sbjct: 125 FRGEKRQLLMGTPARAVRSVSDDELHWKRLNTKEYQDLVGRCHAA 169
>sp|Q0TLV4|CAIE_ECOL5 Carnitine operon protein CaiE OS=Escherichia coli O6:K15:H31
(strain 536 / UPEC) GN=caiE PE=3 SV=1
Length = 196
Score = 101 bits (252), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 93/165 (56%), Gaps = 7/165 (4%)
Query: 53 PVVNKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSN 112
PVV+ F+ PSA +IGDV VG G I LRGD + + +G NIQD ++H
Sbjct: 11 PVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDT 70
Query: 113 LAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVYVEKHAMVAAGALVRQN 172
TI+G+N +GH A+LHGC + +A VGM + ++DG + + ++VAA + V+
Sbjct: 71 ------DTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAG 124
Query: 173 TKIPCGEVWGGNPARFLRKLTEEEMAFISQSAINYSNL-ARVHAA 216
+ ++ G PAR +R ++++E+ + + Y +L R HAA
Sbjct: 125 FRGEKRQLLMGTPARAVRSVSDDELHWKRLNTKEYQDLVGRCHAA 169
>sp|A1A785|CAIE_ECOK1 Carnitine operon protein CaiE OS=Escherichia coli O1:K1 / APEC
GN=caiE PE=3 SV=2
Length = 196
Score = 101 bits (252), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 93/165 (56%), Gaps = 7/165 (4%)
Query: 53 PVVNKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSN 112
PVV+ F+ PSA +IGDV VG G I LRGD + + +G NIQD ++H
Sbjct: 11 PVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDT 70
Query: 113 LAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVYVEKHAMVAAGALVRQN 172
TI+G+N +GH A+LHGC + +A VGM + ++DG + + ++VAA + V+
Sbjct: 71 ------DTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAG 124
Query: 173 TKIPCGEVWGGNPARFLRKLTEEEMAFISQSAINYSNL-ARVHAA 216
+ ++ G PAR +R ++++E+ + + Y +L R HAA
Sbjct: 125 FRGEKRQLLMGTPARAVRSVSDDELHWKRLNTKEYQDLVGRCHAA 169
>sp|B7MAF8|CAIE_ECO45 Carnitine operon protein CaiE OS=Escherichia coli O45:K1 (strain
S88 / ExPEC) GN=caiE PE=3 SV=1
Length = 196
Score = 101 bits (252), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 93/165 (56%), Gaps = 7/165 (4%)
Query: 53 PVVNKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSN 112
PVV+ F+ PSA +IGDV VG G I LRGD + + +G NIQD ++H
Sbjct: 11 PVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDT 70
Query: 113 LAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVYVEKHAMVAAGALVRQN 172
TI+G+N +GH A+LHGC + +A VGM + ++DG + + ++VAA + V+
Sbjct: 71 ------DTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAG 124
Query: 173 TKIPCGEVWGGNPARFLRKLTEEEMAFISQSAINYSNL-ARVHAA 216
+ ++ G PAR +R ++++E+ + + Y +L R HAA
Sbjct: 125 FRGEKRQLLMGTPARAVRSVSDDELHWKRLNTKEYQDLVGRCHAA 169
>sp|B7N7R0|CAIE_ECOLU Carnitine operon protein CaiE OS=Escherichia coli O17:K52:H18
(strain UMN026 / ExPEC) GN=caiE PE=3 SV=1
Length = 196
Score = 100 bits (249), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 93/165 (56%), Gaps = 7/165 (4%)
Query: 53 PVVNKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSN 112
PVV+ F+ PSA +IGDV VG G I LRGD + + +G NIQD ++H
Sbjct: 11 PVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDT 70
Query: 113 LAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVYVEKHAMVAAGALVRQN 172
TI+G+N +GH A+LHGC + +A VGM + ++DG + + ++VAA + V+
Sbjct: 71 ------DTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAG 124
Query: 173 TKIPCGEVWGGNPARFLRKLTEEEMAFISQSAINYSNL-ARVHAA 216
+ ++ G PAR +R ++++E+ + + Y +L R HA+
Sbjct: 125 FRGEKRQLLMGTPARAVRSVSDDELHWKRLNTKEYQDLVGRCHAS 169
>sp|B7MNP2|CAIE_ECO81 Carnitine operon protein CaiE OS=Escherichia coli O81 (strain ED1a)
GN=caiE PE=3 SV=1
Length = 196
Score = 100 bits (249), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 93/165 (56%), Gaps = 7/165 (4%)
Query: 53 PVVNKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSN 112
PVV+ F+ PSA +IGDV VG G I LRGD + + +G NIQD ++H
Sbjct: 11 PVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDT 70
Query: 113 LAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVYVEKHAMVAAGALVRQN 172
TI+G+N +GH A+LHGC + +A VGM + ++DG + + ++VAA + V+
Sbjct: 71 ------DTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAG 124
Query: 173 TKIPCGEVWGGNPARFLRKLTEEEMAFISQSAINYSNL-ARVHAA 216
+ ++ G PAR +R ++++E+ + + Y +L R HA+
Sbjct: 125 FRGEKRQLLMGTPARAVRSVSDDELHWKRLNTKEYQDLVGRCHAS 169
>sp|B7UI81|CAIE_ECO27 Carnitine operon protein CaiE OS=Escherichia coli O127:H6 (strain
E2348/69 / EPEC) GN=caiE PE=3 SV=1
Length = 196
Score = 100 bits (249), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 93/165 (56%), Gaps = 7/165 (4%)
Query: 53 PVVNKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSN 112
PVV+ F+ PSA +IGDV VG G I LRGD + + +G NIQD ++H
Sbjct: 11 PVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDT 70
Query: 113 LAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVYVEKHAMVAAGALVRQN 172
TI+G+N +GH A+LHGC + +A VGM + ++DG + + ++VAA + V+
Sbjct: 71 ------DTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAG 124
Query: 173 TKIPCGEVWGGNPARFLRKLTEEEMAFISQSAINYSNL-ARVHAA 216
+ ++ G PAR +R ++++E+ + + Y +L R HA+
Sbjct: 125 FRGEKRQLLMGTPARAVRSVSDDELHWKRLNTKEYQDLVGRCHAS 169
>sp|A9MYJ4|CAIE_SALPB Carnitine operon protein CaiE OS=Salmonella paratyphi B (strain
ATCC BAA-1250 / SPB7) GN=caiE PE=3 SV=1
Length = 198
Score = 100 bits (248), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 92/159 (57%), Gaps = 6/159 (3%)
Query: 53 PVVNKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSN 112
PVV+ D F+ PSA +IGDV VG G I LRGD + + +G+N+Q ++H
Sbjct: 11 PVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGSNLQYGCIMHGYCDT 70
Query: 113 LAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVYVEKHAMVAAGALVRQN 172
TI+ +N +GH A+LHGC V +A VGM + ++DG + + ++VAA + V+
Sbjct: 71 ------DTIVHENGHIGHGAILHGCVVGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAG 124
Query: 173 TKIPCGEVWGGNPARFLRKLTEEEMAFISQSAINYSNLA 211
+ ++ G+PAR LR++T++E+ + + Y +LA
Sbjct: 125 FQGEARQLLVGSPARVLRQVTDQELHWKRLNTKEYQDLA 163
>sp|B1LFW8|CAIE_ECOSM Carnitine operon protein CaiE OS=Escherichia coli (strain SMS-3-5 /
SECEC) GN=caiE PE=3 SV=1
Length = 196
Score = 100 bits (248), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 93/165 (56%), Gaps = 7/165 (4%)
Query: 53 PVVNKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSN 112
PVV+ F+ PSA +IGDV VG G I LRGD + + +G NIQD ++H
Sbjct: 11 PVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLLVQAGANIQDGCIMHGYCDT 70
Query: 113 LAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVYVEKHAMVAAGALVRQN 172
TI+G+N +GH A+LHGC + +A VGM + ++DG + + ++VAA + V+
Sbjct: 71 ------DTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAG 124
Query: 173 TKIPCGEVWGGNPARFLRKLTEEEMAFISQSAINYSNL-ARVHAA 216
+ ++ G PAR +R ++++E+ + + Y +L R HA+
Sbjct: 125 FRGEKRQLLMGTPARAVRSVSDDELHWKRLNTKEYQDLVGRCHAS 169
>sp|B5YYC9|CAIE_ECO5E Carnitine operon protein CaiE OS=Escherichia coli O157:H7 (strain
EC4115 / EHEC) GN=caiE PE=3 SV=1
Length = 196
Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 92/165 (55%), Gaps = 7/165 (4%)
Query: 53 PVVNKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSN 112
PVV+ F+ PSA +IGDV VG G I LRGD + + +G NIQD ++H
Sbjct: 11 PVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYTDT 70
Query: 113 LAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVYVEKHAMVAAGALVRQN 172
TI+G+N +GH A+LHGC + +A VGM + ++DG + + ++VAA + V+
Sbjct: 71 ------DTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAG 124
Query: 173 TKIPCGEVWGGNPARFLRKLTEEEMAFISQSAINYSNL-ARVHAA 216
++ G PAR +R ++++E+ + + Y +L R HA+
Sbjct: 125 FHGEKRQLLMGTPARAVRSVSDDELHWKRLNTKEYQDLVGRCHAS 169
>sp|Q8XA36|CAIE_ECO57 Carnitine operon protein CaiE OS=Escherichia coli O157:H7 GN=caiE
PE=3 SV=2
Length = 196
Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 92/165 (55%), Gaps = 7/165 (4%)
Query: 53 PVVNKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSN 112
PVV+ F+ PSA +IGDV VG G I LRGD + + +G NIQD ++H
Sbjct: 11 PVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYTDT 70
Query: 113 LAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVYVEKHAMVAAGALVRQN 172
TI+G+N +GH A+LHGC + +A VGM + ++DG + + ++VAA + V+
Sbjct: 71 ------DTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAG 124
Query: 173 TKIPCGEVWGGNPARFLRKLTEEEMAFISQSAINYSNL-ARVHAA 216
++ G PAR +R ++++E+ + + Y +L R HA+
Sbjct: 125 FHGEKRQLLMGTPARAVRSVSDDELHWKRLNTKEYQDLVGRCHAS 169
>sp|B7NHD9|CAIE_ECO7I Carnitine operon protein CaiE OS=Escherichia coli O7:K1 (strain
IAI39 / ExPEC) GN=caiE PE=3 SV=1
Length = 196
Score = 99.8 bits (247), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 93/165 (56%), Gaps = 7/165 (4%)
Query: 53 PVVNKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSN 112
PVV+ F+ PSA +IGDV VG G I LRGD + + +G NIQD ++H
Sbjct: 11 PVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDT 70
Query: 113 LAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVYVEKHAMVAAGALVRQN 172
TI+G+N +GH A+LHGC + +A VGM + ++DG + + ++VAA + V+
Sbjct: 71 ------DTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAISFVKAG 124
Query: 173 TKIPCGEVWGGNPARFLRKLTEEEMAFISQSAINYSNL-ARVHAA 216
+ ++ G PAR +R ++++E+ + + Y +L R HA+
Sbjct: 125 FRGEKRQLLMGTPARAVRNVSDDELHWKRLNTKEYQDLVGRCHAS 169
>sp|Q3Z5X4|CAIE_SHISS Carnitine operon protein CaiE OS=Shigella sonnei (strain Ss046)
GN=caiE PE=3 SV=2
Length = 196
Score = 99.4 bits (246), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 92/165 (55%), Gaps = 7/165 (4%)
Query: 53 PVVNKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSN 112
PVV+ F+ PSA +IGDV VG G I LRGD + + +G NIQD ++H
Sbjct: 11 PVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDT 70
Query: 113 LAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVYVEKHAMVAAGALVRQN 172
TI+G+N +GH A+LHGC + +A VGM + ++DG + + ++VAA + V+
Sbjct: 71 ------DTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAG 124
Query: 173 TKIPCGEVWGGNPARFLRKLTEEEMAFISQSAINYSNL-ARVHAA 216
++ G PAR +R ++++E+ + + Y +L R HA+
Sbjct: 125 FHGEKRQLLMGTPARAVRSVSDDELHWKRLNTKEYQDLVGRCHAS 169
>sp|Q83SQ8|CAIE_SHIFL Carnitine operon protein CaiE OS=Shigella flexneri GN=caiE PE=3
SV=2
Length = 196
Score = 99.4 bits (246), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 92/165 (55%), Gaps = 7/165 (4%)
Query: 53 PVVNKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSN 112
PVV+ F+ PSA +IGDV VG G I LRGD + + +G NIQD ++H
Sbjct: 11 PVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDT 70
Query: 113 LAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVYVEKHAMVAAGALVRQN 172
TI+G+N +GH A+LHGC + +A VGM + ++DG + + ++VAA + V+
Sbjct: 71 ------DTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAG 124
Query: 173 TKIPCGEVWGGNPARFLRKLTEEEMAFISQSAINYSNL-ARVHAA 216
++ G PAR +R ++++E+ + + Y +L R HA+
Sbjct: 125 FSGEKRQLLMGTPARAVRSVSDDELHWKRLNTKEYQDLVGRCHAS 169
>sp|Q0T8F9|CAIE_SHIF8 Carnitine operon protein CaiE OS=Shigella flexneri serotype 5b
(strain 8401) GN=caiE PE=3 SV=2
Length = 196
Score = 99.4 bits (246), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 92/165 (55%), Gaps = 7/165 (4%)
Query: 53 PVVNKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSN 112
PVV+ F+ PSA +IGDV VG G I LRGD + + +G NIQD ++H
Sbjct: 11 PVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDT 70
Query: 113 LAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVYVEKHAMVAAGALVRQN 172
TI+G+N +GH A+LHGC + +A VGM + ++DG + + ++VAA + V+
Sbjct: 71 ------DTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAG 124
Query: 173 TKIPCGEVWGGNPARFLRKLTEEEMAFISQSAINYSNL-ARVHAA 216
++ G PAR +R ++++E+ + + Y +L R HA+
Sbjct: 125 FSGEKRQLLMGTPARAVRSVSDDELHWKRLNTKEYQDLVGRCHAS 169
>sp|A7ZVY5|CAIE_ECOHS Carnitine operon protein CaiE OS=Escherichia coli O9:H4 (strain HS)
GN=caiE PE=3 SV=1
Length = 196
Score = 99.4 bits (246), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 92/165 (55%), Gaps = 7/165 (4%)
Query: 53 PVVNKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSN 112
PVV+ F+ PSA +IGDV VG G I LRGD + + +G NIQD ++H
Sbjct: 11 PVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDT 70
Query: 113 LAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVYVEKHAMVAAGALVRQN 172
TI+G+N +GH A+LHGC + +A VGM + ++DG + + ++VAA + V+
Sbjct: 71 ------DTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAG 124
Query: 173 TKIPCGEVWGGNPARFLRKLTEEEMAFISQSAINYSNL-ARVHAA 216
++ G PAR +R ++++E+ + + Y +L R HA+
Sbjct: 125 FHGEKRQLLMGTPARAVRSVSDDELHWKRLNTKEYQDLVGRCHAS 169
>sp|B7M0D2|CAIE_ECO8A Carnitine operon protein CaiE OS=Escherichia coli O8 (strain IAI1)
GN=caiE PE=3 SV=1
Length = 196
Score = 99.4 bits (246), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 92/165 (55%), Gaps = 7/165 (4%)
Query: 53 PVVNKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSN 112
PVV+ F+ PSA +IGDV VG G I LRGD + + +G NIQD ++H
Sbjct: 11 PVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDT 70
Query: 113 LAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVYVEKHAMVAAGALVRQN 172
TI+G+N +GH A+LHGC + +A VGM + ++DG + + ++VAA + V+
Sbjct: 71 ------DTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAG 124
Query: 173 TKIPCGEVWGGNPARFLRKLTEEEMAFISQSAINYSNL-ARVHAA 216
++ G PAR +R ++++E+ + + Y +L R HA+
Sbjct: 125 FHGEKRQLLMGTPARAVRSVSDDELHWKRLNTKEYQDLVGRCHAS 169
>sp|B7L4F8|CAIE_ECO55 Carnitine operon protein CaiE OS=Escherichia coli (strain 55989 /
EAEC) GN=caiE PE=3 SV=1
Length = 196
Score = 99.4 bits (246), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 92/165 (55%), Gaps = 7/165 (4%)
Query: 53 PVVNKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSN 112
PVV+ F+ PSA +IGDV VG G I LRGD + + +G NIQD ++H
Sbjct: 11 PVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDT 70
Query: 113 LAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVYVEKHAMVAAGALVRQN 172
TI+G+N +GH A+LHGC + +A VGM + ++DG + + ++VAA + V+
Sbjct: 71 ------DTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAG 124
Query: 173 TKIPCGEVWGGNPARFLRKLTEEEMAFISQSAINYSNL-ARVHAA 216
++ G PAR +R ++++E+ + + Y +L R HA+
Sbjct: 125 FHGEKRQLLMGTPARAVRSVSDDELHWKRLNTKEYQDLVGRCHAS 169
>sp|A7ZHC6|CAIE_ECO24 Carnitine operon protein CaiE OS=Escherichia coli O139:H28 (strain
E24377A / ETEC) GN=caiE PE=3 SV=1
Length = 196
Score = 99.4 bits (246), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 92/165 (55%), Gaps = 7/165 (4%)
Query: 53 PVVNKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSN 112
PVV+ F+ PSA +IGDV VG G I LRGD + + +G NIQD ++H
Sbjct: 11 PVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDT 70
Query: 113 LAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVYVEKHAMVAAGALVRQN 172
TI+G+N +GH A+LHGC + +A VGM + ++DG + + ++VAA + V+
Sbjct: 71 ------DTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAG 124
Query: 173 TKIPCGEVWGGNPARFLRKLTEEEMAFISQSAINYSNL-ARVHAA 216
++ G PAR +R ++++E+ + + Y +L R HA+
Sbjct: 125 FHGEKRQLLMGTPARAVRSVSDDELHWKRLNTKEYQDLVGRCHAS 169
>sp|B7LWM6|CAIE_ESCF3 Carnitine operon protein CaiE OS=Escherichia fergusonii (strain
ATCC 35469 / DSM 13698 / CDC 0568-73) GN=caiE PE=3 SV=1
Length = 196
Score = 99.0 bits (245), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 91/165 (55%), Gaps = 7/165 (4%)
Query: 53 PVVNKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSN 112
PVV+ F+ PSA +IGDV VG G I LRGD + + +G NIQD ++H
Sbjct: 11 PVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDT 70
Query: 113 LAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVYVEKHAMVAAGALVRQN 172
TI+G+N +GH A+LHGC + +A VGM + ++DG + + ++VAA + V+
Sbjct: 71 ------DTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAG 124
Query: 173 TKIPCGEVWGGNPARFLRKLTEEEMAFISQSAINYSNL-ARVHAA 216
++ G PAR +R ++++E+ + + Y +L R H A
Sbjct: 125 FSGEKRQLLMGTPARAVRSVSDDELRWKHLNTKEYQDLVGRCHVA 169
>sp|P39206|CAIE_ECOLI Carnitine operon protein CaiE OS=Escherichia coli (strain K12)
GN=caiE PE=3 SV=2
Length = 196
Score = 98.2 bits (243), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 92/165 (55%), Gaps = 7/165 (4%)
Query: 53 PVVNKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSN 112
PVV+ F+ PSA +IGDV VG G I LRGD + + +G NIQD ++H
Sbjct: 11 PVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDT 70
Query: 113 LAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVYVEKHAMVAAGALVRQN 172
TI+G+N +GH A+LHGC + +A VGM + ++DG + + ++VAA + V+
Sbjct: 71 ------DTIVGENGHIGHGAILHGCLIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAG 124
Query: 173 TKIPCGEVWGGNPARFLRKLTEEEMAFISQSAINYSNL-ARVHAA 216
+ ++ G PAR +R ++++E+ + + Y +L R H +
Sbjct: 125 FRGEKRQLLMGTPARAVRNVSDDELHWKRLNTKEYQDLVGRCHVS 169
>sp|B1XBG0|CAIE_ECODH Carnitine operon protein CaiE OS=Escherichia coli (strain K12 /
DH10B) GN=caiE PE=3 SV=1
Length = 196
Score = 98.2 bits (243), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 92/165 (55%), Gaps = 7/165 (4%)
Query: 53 PVVNKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSN 112
PVV+ F+ PSA +IGDV VG G I LRGD + + +G NIQD ++H
Sbjct: 11 PVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDT 70
Query: 113 LAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVYVEKHAMVAAGALVRQN 172
TI+G+N +GH A+LHGC + +A VGM + ++DG + + ++VAA + V+
Sbjct: 71 ------DTIVGENGHIGHGAILHGCLIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAG 124
Query: 173 TKIPCGEVWGGNPARFLRKLTEEEMAFISQSAINYSNL-ARVHAA 216
+ ++ G PAR +R ++++E+ + + Y +L R H +
Sbjct: 125 FRGEKRQLLMGTPARAVRNVSDDELHWKRLNTKEYQDLVGRCHVS 169
>sp|C4ZPW1|CAIE_ECOBW Carnitine operon protein CaiE OS=Escherichia coli (strain K12 /
MC4100 / BW2952) GN=caiE PE=3 SV=1
Length = 196
Score = 98.2 bits (243), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 92/165 (55%), Gaps = 7/165 (4%)
Query: 53 PVVNKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSN 112
PVV+ F+ PSA +IGDV VG G I LRGD + + +G NIQD ++H
Sbjct: 11 PVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDT 70
Query: 113 LAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVYVEKHAMVAAGALVRQN 172
TI+G+N +GH A+LHGC + +A VGM + ++DG + + ++VAA + V+
Sbjct: 71 ------DTIVGENGHIGHGAILHGCLIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAG 124
Query: 173 TKIPCGEVWGGNPARFLRKLTEEEMAFISQSAINYSNL-ARVHAA 216
+ ++ G PAR +R ++++E+ + + Y +L R H +
Sbjct: 125 FRGEKRQLLMGTPARAVRNVSDDELHWKRLNTKEYQDLVGRCHVS 169
>sp|B1IRE1|CAIE_ECOLC Carnitine operon protein CaiE OS=Escherichia coli (strain ATCC 8739
/ DSM 1576 / Crooks) GN=caiE PE=3 SV=1
Length = 196
Score = 98.2 bits (243), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 92/165 (55%), Gaps = 7/165 (4%)
Query: 53 PVVNKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSN 112
P+V+ F+ PSA +IGDV VG G I LRGD + + +G NIQD ++H
Sbjct: 11 PIVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDT 70
Query: 113 LAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVYVEKHAMVAAGALVRQN 172
TI+G+N +GH A+LHGC + +A VGM + ++DG + + ++VAA + V+
Sbjct: 71 ------DTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAG 124
Query: 173 TKIPCGEVWGGNPARFLRKLTEEEMAFISQSAINYSNL-ARVHAA 216
++ G PAR +R ++++E+ + + Y +L R HA+
Sbjct: 125 FSGEKRQLLIGTPARAVRSVSDDELHWKRLNTKEYQDLVGRCHAS 169
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.135 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 99,847,819
Number of Sequences: 539616
Number of extensions: 4105151
Number of successful extensions: 12925
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 472
Number of HSP's successfully gapped in prelim test: 653
Number of HSP's that attempted gapping in prelim test: 11342
Number of HSP's gapped (non-prelim): 1858
length of query: 271
length of database: 191,569,459
effective HSP length: 116
effective length of query: 155
effective length of database: 128,974,003
effective search space: 19990970465
effective search space used: 19990970465
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)