Query 024155
Match_columns 271
No_of_seqs 82 out of 84
Neff 3.1
Searched_HMMs 13730
Date Mon Mar 25 03:20:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024155.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/024155hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1x8da1 d.58.4.21 (A:1-104) L- 22.4 8.5 0.00062 27.9 -0.0 40 74-118 39-78 (104)
2 d1dmca_ g.46.1.1 (A:) Metallot 14.8 24 0.0017 21.2 0.8 13 226-238 17-29 (31)
3 d1wz3a1 d.15.1.7 (A:10-93) Aut 12.2 1.4E+02 0.0099 21.3 4.5 42 54-97 1-55 (84)
4 d1ro5a_ d.108.1.3 (A:) Autoind 12.2 37 0.0027 25.8 1.4 43 138-185 19-61 (197)
5 d1kkea2 b.21.1.2 (A:313-455) R 10.1 1.7E+02 0.012 22.7 4.7 70 44-128 42-119 (143)
6 d1dl0a_ g.3.6.2 (A:) J-atracot 9.3 48 0.0035 20.5 0.9 11 229-239 8-18 (37)
7 d1wida_ b.142.1.2 (A:) DNA-bin 9.1 52 0.0038 23.1 1.2 24 77-100 10-33 (117)
8 d1vjta2 d.162.1.2 (A:192-469) 8.8 2E+02 0.014 22.9 4.9 43 123-167 187-239 (278)
9 d2d7ma1 b.1.18.10 (A:8-109) Fi 8.6 2.6E+02 0.019 18.8 4.9 74 51-129 2-81 (102)
10 d2pbla1 c.69.1.2 (A:1-261) Unc 7.9 89 0.0065 24.3 2.2 42 146-187 27-72 (261)
No 1
>d1x8da1 d.58.4.21 (A:1-104) L-rhamnose mutarotase YiiL {Escherichia coli [TaxId: 562]}
Probab=22.40 E-value=8.5 Score=27.94 Aligned_cols=40 Identities=15% Similarity=0.272 Sum_probs=32.7
Q ss_pred cceeeccCCcCCceEEEEccccchhhhhhhccccccceeeeeEee
Q 024155 74 RTYTLTHSDITSKLTLAISQTINNSQLQGWYNRLQRDEVVAEWKK 118 (271)
Q Consensus 74 RrYTLTHSD~T~~LfLtIg~~fn~dqL~gwynrl~RDEVlAEWk~ 118 (271)
|.||+-+.+.+.-||--++.+++.+ + .++..++|..+|-+
T Consensus 39 ~nysIf~~~~~~~Lf~y~e~~~~~~-~----~~~a~~~~~~~W~~ 78 (104)
T d1x8da1 39 HNYAIYLDKARNLLFAMVEIESEER-W----NAVASTDVCQRWWK 78 (104)
T ss_dssp EEEEEEEETTTTEEEEEEEESCHHH-H----HHGGGSHHHHHHHH
T ss_pred eEEEEEEECCCCEEEEEEEECcHHh-H----HHhhCChHHHHHHH
Confidence 7899999999999999999888654 2 24778999999964
No 2
>d1dmca_ g.46.1.1 (A:) Metallothionein {Crab (Callinectes sapidus), alpha and beta domains [TaxId: 6763]}
Probab=14.77 E-value=24 Score=21.20 Aligned_cols=13 Identities=38% Similarity=1.331 Sum_probs=10.0
Q ss_pred CCCCCcccCCCcc
Q 024155 226 ELPEPCQETCNCC 238 (271)
Q Consensus 226 ~~~~~c~~~c~cc 238 (271)
+-...|..+|+||
T Consensus 17 ecsktctkpcscc 29 (31)
T d1dmca_ 17 ECSKTCTKPCSCC 29 (31)
T ss_dssp HHHHHCSSCCSSS
T ss_pred HHhhhcCCCcccC
Confidence 3446788999998
No 3
>d1wz3a1 d.15.1.7 (A:10-93) Autophagy-related protein 12b (APG12b) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=12.24 E-value=1.4e+02 Score=21.27 Aligned_cols=42 Identities=14% Similarity=0.195 Sum_probs=29.1
Q ss_pred CcceEEEeccCCcCCCCCCCcceeeccCCc-------------CCceEEEEccccch
Q 024155 54 SKLKVLFLGVDEEKHPGKLPRTYTLTHSDI-------------TSKLTLAISQTINN 97 (271)
Q Consensus 54 ~KLsV~f~gvt~~~~P~~ipRrYTLTHSD~-------------T~~LfLtIg~~fn~ 97 (271)
.|+.|.|.++- ..|+.-+++++++-++- +..|||-|+++|+.
T Consensus 1 ~KV~v~fk~iG--~aPilk~~~~kv~~~~~f~~vi~FLrk~Lk~dsvf~Yin~sFaP 55 (84)
T d1wz3a1 1 QKIVVHLRATG--GAPILKQSKFKVSGSDKFANVIDFLRRQLHSDSLFVYVNSAFSP 55 (84)
T ss_dssp CEEEEEEEECT--TCCCCSCCEEEEETTSBTHHHHHHHHHHHTCSSCEEEEEEEECC
T ss_pred CcEEEEEEecC--CCcccccceEEECCCCchHHHHHHHHHHhcCCeEEEEEccccCC
Confidence 47788888664 34776788888776653 34577777777764
No 4
>d1ro5a_ d.108.1.3 (A:) Autoinducer synthesis protein LasI {Pseudomonas aeruginosa [TaxId: 287]}
Probab=12.21 E-value=37 Score=25.82 Aligned_cols=43 Identities=12% Similarity=0.069 Sum_probs=27.2
Q ss_pred hhHHhhHHHHHHhhhhhhhhhhhhhcCccccccCcccCCCeeEEEEee
Q 024155 138 LDICARLRFFIFSKELPVVLKAFVHGDGNLLNNHPELQEALVWVYFHS 185 (271)
Q Consensus 138 ~~~~A~lRy~IFrKELPLvLkAI~yGDr~LF~~~PeL~~ApI~V~FhS 185 (271)
++.+-++||.||.+|+--.+. +-|.--+..|-. .+.+|+-++.
T Consensus 19 l~~~~rlR~~VFv~E~gw~~~---~~~g~E~D~~D~--~~~~~lv~~~ 61 (197)
T d1ro5a_ 19 LGEMHKLRAQVFKERKGWDVS---VIDEMEIDGYDA--LSPYYMLIQE 61 (197)
T ss_dssp HHHHHHHHHHHHTTCSSSCCC---EETTEECCGGGG--SCCEEEEEEE
T ss_pred HHHHHHHHHHHHHhhhCCCCC---CCcccccccCCC--cccEEEEecc
Confidence 456778999999999965432 224444444433 4567777754
No 5
>d1kkea2 b.21.1.2 (A:313-455) Reovirus attachment protein sigma 1 head domain {Reovirus [TaxId: 10891]}
Probab=10.11 E-value=1.7e+02 Score=22.65 Aligned_cols=70 Identities=23% Similarity=0.443 Sum_probs=43.2
Q ss_pred hhhCCCCCCCCcceEEEe-ccCC-----cCCCCCCCcceeeccCCcCC--ceEEEEccccchhhhhhhccccccceeeee
Q 024155 44 RLFGPAIFEASKLKVLFL-GVDE-----EKHPGKLPRTYTLTHSDITS--KLTLAISQTINNSQLQGWYNRLQRDEVVAE 115 (271)
Q Consensus 44 rl~gp~~Fnp~KLsV~f~-gvt~-----~~~P~~ipRrYTLTHSD~T~--~LfLtIg~~fn~dqL~gwynrl~RDEVlAE 115 (271)
+.=|-+|.+--||+.+|. |... .++|. +|.|... --|.+|+..=--..+. ..|.--+.|
T Consensus 42 ~f~t~~I~~~Gkf~lNFVtGL~p~~~TG~TePs--------~ttd~~s~~tt~~av~~~~g~~r~~-----a~r~l~v~e 108 (143)
T d1kkea2 42 AFDGFSIADGGDLSLNFVTGLLPPLLTGDTEPA--------FHNDVVTYGAQTVAIGLSSGGAPQY-----MSKNLWVEQ 108 (143)
T ss_dssp CEEEECCCSEEEEEEETTSSBCTTCCGGGGCBT--------TTTCCCCEEEEEEEEEEESSSSCEE-----EEEEEEEEE
T ss_pred cccccceecCCcEEEEEeccCCCCccCCCCCCc--------cccCccccceEEEEEEEecCCcchh-----hhhhhchhh
Confidence 334457889999999998 7542 56665 7888665 6667776432222221 345556789
Q ss_pred EeeeCCeeEEEEE
Q 024155 116 WKKVKGKMSLHVH 128 (271)
Q Consensus 116 Wk~~~g~~~LhVy 128 (271)
|. +|..-|.+|
T Consensus 109 W~--dGeLei~n~ 119 (143)
T d1kkea2 109 WQ--DGVLRLRVE 119 (143)
T ss_dssp EE--TTEEEEEEE
T ss_pred hh--CcEEEEEEc
Confidence 95 455555443
No 6
>d1dl0a_ g.3.6.2 (A:) J-atracotoxin-hv1c {Australian funnel-web spider (Hadronyche versuta) [TaxId: 6904]}
Probab=9.33 E-value=48 Score=20.46 Aligned_cols=11 Identities=45% Similarity=1.470 Sum_probs=9.5
Q ss_pred CCcccCCCccc
Q 024155 229 EPCQETCNCCF 239 (271)
Q Consensus 229 ~~c~~~c~cc~ 239 (271)
+||..-|.||-
T Consensus 8 rpcaaccpccp 18 (37)
T d1dl0a_ 8 RPCAACCPCCP 18 (37)
T ss_dssp SBCCSSCCCCT
T ss_pred CccccccCCCC
Confidence 68999999994
No 7
>d1wida_ b.142.1.2 (A:) DNA-binding protein RAV1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=9.12 E-value=52 Score=23.07 Aligned_cols=24 Identities=21% Similarity=0.264 Sum_probs=19.3
Q ss_pred eeccCCcCCceEEEEccccchhhh
Q 024155 77 TLTHSDITSKLTLAISQTINNSQL 100 (271)
Q Consensus 77 TLTHSD~T~~LfLtIg~~fn~dqL 100 (271)
+||+||++..-.|.|-..|+.+.+
T Consensus 10 ~Lt~sDv~~~~rL~iP~~~~~~~l 33 (117)
T d1wida_ 10 AVTPSDVGKLNRLVIPKHHAEKHF 33 (117)
T ss_dssp ECCTTTTSSSCCEEECHHHHTTTS
T ss_pred EecchhcCCCCEEEECHHHHHHhC
Confidence 799999977667888888876655
No 8
>d1vjta2 d.162.1.2 (A:192-469) Putative alpha-glucosidase TM0752 {Thermotoga maritima [TaxId: 2336]}
Probab=8.85 E-value=2e+02 Score=22.88 Aligned_cols=43 Identities=16% Similarity=0.111 Sum_probs=26.5
Q ss_pred eEEEEEEEeeCC--------ccchhHHhh--HHHHHHhhhhhhhhhhhhhcCccc
Q 024155 123 MSLHVHCHISGG--------HFLLDICAR--LRFFIFSKELPVVLKAFVHGDGNL 167 (271)
Q Consensus 123 ~~LhVyc~VsG~--------~f~~~~~A~--lRy~IFrKELPLvLkAI~yGDr~L 167 (271)
.++-|-|.|++. ....+..+. ++..|=+.| |+++|++.||+.+
T Consensus 187 avVEVpc~Vd~~Gi~P~~vg~~~p~~~~~~~l~~~v~~~e--L~veAa~~gd~~~ 239 (278)
T d1vjta2 187 VVMELPVWVDCCGIHREKVEPDLTHRIKIFYLWPRILRME--WNLEAYISRDRKV 239 (278)
T ss_dssp SEEEEEEEEETTEEEECCCCSCCCHHHHHHTHHHHHHHHH--HHHHHHHHTCHHH
T ss_pred hheEeEEEEeCCceeeeecCCCChHHHHHHHHHHHHHHHH--HHHHHHHhCCHHH
Confidence 446788999853 121212222 444554445 6899999999976
No 9
>d2d7ma1 b.1.18.10 (A:8-109) Filamin C {Human (Homo sapiens) [TaxId: 9606]}
Probab=8.57 E-value=2.6e+02 Score=18.81 Aligned_cols=74 Identities=19% Similarity=0.348 Sum_probs=42.6
Q ss_pred CCCCcceEEEeccCCcCCCCCCCcceeeccCCc-CCceEEEE-ccccc--hhhhhhhccccccce-eeeeEe-eeCCeeE
Q 024155 51 FEASKLKVLFLGVDEEKHPGKLPRTYTLTHSDI-TSKLTLAI-SQTIN--NSQLQGWYNRLQRDE-VVAEWK-KVKGKMS 124 (271)
Q Consensus 51 Fnp~KLsV~f~gvt~~~~P~~ipRrYTLTHSD~-T~~LfLtI-g~~fn--~dqL~gwynrl~RDE-VlAEWk-~~~g~~~ 124 (271)
|||+|.+|.=.|+....-++..|-.+|+.=.|- -++|+..| |.+=. .-+|. ...|- ...+|. +..|.|.
T Consensus 2 ~D~skv~v~G~Gl~~~~v~~g~~~~F~Vd~~~aG~g~l~v~i~~p~g~~~~~~v~-----~~~dg~y~v~y~P~~~G~h~ 76 (102)
T d2d7ma1 2 HDASKVRASGPGLNASGIPASLPVEFTIDARDAGEGLLTVQILDPEGKPKKANIR-----DNGDGTYTVSYLPDMSGRYT 76 (102)
T ss_dssp CCGGGEEEESSTTCSSCEESSSCEEEEEEESSSCSSCEEEEEECTTSCBCCEEEE-----ECSSSCEEEEECCCSCEEEE
T ss_pred CCCCeeEEECCCcCcCCccCCCeEEEEEEeCCCCCCcEEEEEEeCCCCEeeeEEE-----eCCCcEEEEEEEECCCEeEE
Confidence 789998887667642111223456788854554 67787777 22211 11222 34453 457776 5557777
Q ss_pred EEEEE
Q 024155 125 LHVHC 129 (271)
Q Consensus 125 LhVyc 129 (271)
++|.+
T Consensus 77 i~V~~ 81 (102)
T d2d7ma1 77 ITIKY 81 (102)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 77754
No 10
>d2pbla1 c.69.1.2 (A:1-261) Uncharacterized protein TM1040_2492 {Silicibacter sp. tm1040 [TaxId: 292414]}
Probab=7.93 E-value=89 Score=24.35 Aligned_cols=42 Identities=19% Similarity=0.242 Sum_probs=28.2
Q ss_pred HHHHhhhhhh-hhhhhhhcCcc--ccc-cCcccCCCeeEEEEeeCC
Q 024155 146 FFIFSKELPV-VLKAFVHGDGN--LLN-NHPELQEALVWVYFHSNI 187 (271)
Q Consensus 146 y~IFrKELPL-vLkAI~yGDr~--LF~-~~PeL~~ApI~V~FhS~~ 187 (271)
..-|+.+||. +..-|.|||.. .+. -.|+=...|+.|+||-..
T Consensus 27 ~~~~~~~~~~~~~~dv~Yg~~~~~~lDiy~P~~~~~P~vv~iHGG~ 72 (261)
T d2pbla1 27 AEDFRNSLQDRARLNLSYGEGDRHKFDLFLPEGTPVGLFVFVHGGY 72 (261)
T ss_dssp HHHHHHHHGGGEEEEEESSSSTTCEEEEECCSSSCSEEEEEECCST
T ss_pred HHHHHhhccccccCCcCCCCCcCeEEEEeccCCCCCCeEEEECCCC
Confidence 4456677765 34578999852 122 237767889999999864
Done!