Your job contains 1 sequence.
>024157
MSGATRVRSMNVAESETRPVLGPAGNKTGSLSAWKPASKPSRKIEKSPVEVNAAEEKKTL
SPSSKAATPPASKLSPKSHSLSVPSILRRHEQLLQSNLSLNASCSSDASTDSFHSRASIG
RLTRSNSVGIRRKPFPSKPRSVVSDGGLDSPPPDGSQTKKRCAWVTPNTDPCYAAFHDEE
WGVPVHDDKKLFELLVLSGALSELTWPAILSKRHIFREVFVGFDPIAVSKLNEKKLLAAG
SAASSLLSELKLRAIIENARQISKVDFYFHY
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 024157
(271 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2174373 - symbol:AT5G57970 species:3702 "Arabi... 669 9.4e-66 1
TAIR|locus:2025697 - symbol:AT1G80850 species:3702 "Arabi... 346 2.5e-39 2
TAIR|locus:2200447 - symbol:AT1G15970 species:3702 "Arabi... 419 2.9e-39 1
TAIR|locus:2037268 - symbol:AT1G75090 species:3702 "Arabi... 290 1.6e-28 2
TAIR|locus:2156329 - symbol:AT5G44680 species:3702 "Arabi... 241 2.1e-23 2
TAIR|locus:2087710 - symbol:AT3G12710 species:3702 "Arabi... 241 2.1e-20 1
TAIR|locus:1006230719 - symbol:AT1G13635 species:3702 "Ar... 237 5.7e-20 1
TIGR_CMR|GSU_0567 - symbol:GSU_0567 "DNA-3-methyladenine ... 213 2.0e-17 1
TIGR_CMR|CBU_0383 - symbol:CBU_0383 "DNA-3-methyladenine ... 204 1.8e-16 1
UNIPROTKB|P05100 - symbol:tag "3-methyl-adenine DNA glyco... 195 1.6e-15 1
TIGR_CMR|CPS_2351 - symbol:CPS_2351 "DNA-3-methyladenine ... 182 3.8e-14 1
TIGR_CMR|SPO_1900 - symbol:SPO_1900 "DNA-3-methyladenine ... 181 4.9e-14 1
UNIPROTKB|Q0C3V6 - symbol:tag "DNA-3-methyladenine glycos... 174 2.7e-13 1
UNIPROTKB|Q9KRH0 - symbol:VC1672 "DNA-3-methyladenine gly... 165 2.4e-12 1
TIGR_CMR|VC_1672 - symbol:VC_1672 "DNA-3-methyladenine gl... 165 2.4e-12 1
TIGR_CMR|SO_0016 - symbol:SO_0016 "DNA-3-methyladenine gl... 155 2.8e-11 1
DICTYBASE|DDB_G0271050 - symbol:magA "methyladenine glyco... 156 5.1e-11 1
>TAIR|locus:2174373 [details] [associations]
symbol:AT5G57970 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006281 "DNA repair" evidence=IEA;ISS]
[GO:0006284 "base-excision repair" evidence=IEA] [GO:0008725
"DNA-3-methyladenine glycosylase activity" evidence=IEA;ISS]
[GO:0006306 "DNA methylation" evidence=RCA] InterPro:IPR005019
InterPro:IPR011257 Pfam:PF03352 EMBL:CP002688
GenomeReviews:BA000015_GR eggNOG:COG2818 KO:K01246 GO:GO:0008725
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150 EMBL:AB013396
HSSP:P05100 HOGENOM:HOG000220754 EMBL:BT003075 EMBL:AK227342
IPI:IPI00522860 RefSeq:NP_001032091.1 RefSeq:NP_200605.1
UniGene:At.29303 UniGene:At.66976 ProteinModelPortal:Q9FJL9
SMR:Q9FJL9 PaxDb:Q9FJL9 PRIDE:Q9FJL9 EnsemblPlants:AT5G57970.1
EnsemblPlants:AT5G57970.2 GeneID:835908 KEGG:ath:AT5G57970
TAIR:At5g57970 InParanoid:Q9FJL9 OMA:VSMLERE PhylomeDB:Q9FJL9
ProtClustDB:CLSN2716844 Genevestigator:Q9FJL9 Uniprot:Q9FJL9
Length = 347
Score = 669 (240.6 bits), Expect = 9.4e-66, P = 9.4e-66
Identities = 141/265 (53%), Positives = 159/265 (60%)
Query: 1 MSGATRVRSMNVAESETRPVLGPAGNKTGSLSAWKPASKPSRKIEKSPVEVNAAEEKKXX 60
MSGA RV+SMNVAE+ETR LG K K SK RK+E+S ++EK
Sbjct: 1 MSGAPRVQSMNVAEAETRSTLGSTAKKASPFITHKAVSKSLRKLERSSSGRTGSDEK--- 57
Query: 61 XXXXXXXXXXXXXXXXXXHSLSVPSILRRHEXXXXXXXXXXXXXXXXXXTDSFHSRASIG 120
H+L+ SILRRHE DSFHSRAS G
Sbjct: 58 --TSYATPTETVSSSSQKHTLNAASILRRHEQNLNSNLSLNASFSSDASMDSFHSRASTG 115
Query: 121 RLTRSNSVGIRRKPFPSKPRSVVSDGGLDSPPPDGSQTKKRCAWVTPNTDPCYAAFHDEE 180
RL RS SVG R K +PSKPRSVVS+G LDSPP +GS+TKKRC WVTPN+DPCY FHDEE
Sbjct: 116 RLIRSYSVGSRSKSYPSKPRSVVSEGALDSPP-NGSETKKRCTWVTPNSDPCYIVFHDEE 174
Query: 181 WGVPVHDDKKLFELLVLSGALSELTWPAILSKRHIFREVFVGFDPIAVSKLNXXXXXXXX 240
WGVPVHDDK+LFELLVLSGAL+E TWP ILSKR FREVF FDP A+ K+N
Sbjct: 175 WGVPVHDDKRLFELLVLSGALAEHTWPTILSKRQAFREVFADFDPNAIVKINEKKIIGPG 234
Query: 241 XXXXXXXXXXXXRAIIENARQISKV 265
RA+IENARQI KV
Sbjct: 235 SPASTLLSDLKLRAVIENARQILKV 259
>TAIR|locus:2025697 [details] [associations]
symbol:AT1G80850 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006281 "DNA repair" evidence=IEA;ISS]
[GO:0006284 "base-excision repair" evidence=IEA] [GO:0008725
"DNA-3-methyladenine glycosylase activity" evidence=IEA;ISS]
[GO:0006306 "DNA methylation" evidence=RCA] InterPro:IPR005019
InterPro:IPR011257 Pfam:PF03352 EMBL:CP002684
GenomeReviews:CT485782_GR eggNOG:COG2818 KO:K01246 GO:GO:0008725
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150 EMBL:AC011713
UniGene:At.28188 HSSP:P05100 HOGENOM:HOG000220754
ProtClustDB:CLSN2679529 EMBL:BT033081 IPI:IPI00524875 PIR:B96841
RefSeq:NP_178200.1 UniGene:At.50058 ProteinModelPortal:Q9SAH6
SMR:Q9SAH6 EnsemblPlants:AT1G80850.1 GeneID:844424
KEGG:ath:AT1G80850 TAIR:At1g80850 InParanoid:Q9SAH6 OMA:ENARQIC
PhylomeDB:Q9SAH6 Genevestigator:Q9SAH6 Uniprot:Q9SAH6
Length = 327
Score = 346 (126.9 bits), Expect = 2.5e-39, Sum P(2) = 2.5e-39
Identities = 80/184 (43%), Positives = 99/184 (53%)
Query: 84 PSILRRHEXXXXXXXXXXXXXXXXXXTDSFHSRASIGR-LTRSNSVGIRRKPFPSKPRSV 142
P ILRR+ S S +S R L RS SV S R++
Sbjct: 62 PPILRRNGISMTASYSSDASSSCESSPLSMTSTSSGKRVLRRSGSVSSSS----SLRRNL 117
Query: 143 VSDGGLDSPPPDG-SQTKKRCAWVTPNTDPCYAAFHDEEWGVPVHDDKKLFELLVLSGAL 201
+ D D +KRCAW+TP +D CY AFHDEEWGVPVHDDK+LFELL LSGAL
Sbjct: 118 TEER--DEKASDCFCDGRKRCAWITPKSDQCYIAFHDEEWGVPVHDDKRLFELLSLSGAL 175
Query: 202 SELTWPAILSKRHIFREVFVGFDPIAVSKLNXXXXXXXXXXXXXXXXXXXXRAIIENARQ 261
+EL+W ILSKR +FREVF+ FDPIA+S+L R+I+ENA Q
Sbjct: 176 AELSWKDILSKRQLFREVFMDFDPIAISELTNKKITSPEIAATTLLSEQKLRSILENANQ 235
Query: 262 ISKV 265
+ K+
Sbjct: 236 VCKI 239
Score = 90 (36.7 bits), Expect = 2.5e-39, Sum P(2) = 2.5e-39
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 1 MSGATRVRSMNVAESETRPVLGPAGNKTGSLSAWKPASKP 40
MS RVRS++ ++ E R VLGPAGNK KP KP
Sbjct: 1 MSAPPRVRSVDSSDREFRSVLGPAGNKLQQKPLSKPVKKP 40
>TAIR|locus:2200447 [details] [associations]
symbol:AT1G15970 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006281 "DNA repair" evidence=IEA;ISS]
[GO:0006284 "base-excision repair" evidence=IEA] [GO:0008725
"DNA-3-methyladenine glycosylase activity" evidence=IEA;ISS]
InterPro:IPR005019 InterPro:IPR011257 Pfam:PF03352 EMBL:CP002684
GenomeReviews:CT485782_GR eggNOG:COG2818 KO:K01246 GO:GO:0008725
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150 EMBL:AC010924
HSSP:P05100 HOGENOM:HOG000220754 EMBL:BT029471 EMBL:AK229092
IPI:IPI00536280 PIR:C86294 RefSeq:NP_173049.1 UniGene:At.43545
ProteinModelPortal:Q9S9N7 SMR:Q9S9N7 PaxDb:Q9S9N7 PRIDE:Q9S9N7
EnsemblPlants:AT1G15970.1 GeneID:838167 KEGG:ath:AT1G15970
TAIR:At1g15970 InParanoid:Q9S9N7 OMA:EREFRSV PhylomeDB:Q9S9N7
ProtClustDB:CLSN2679529 Genevestigator:Q9S9N7 Uniprot:Q9S9N7
Length = 352
Score = 419 (152.6 bits), Expect = 2.9e-39, P = 2.9e-39
Identities = 106/266 (39%), Positives = 131/266 (49%)
Query: 1 MSGATRVRSMNVAESETRPVLGPAGNKTGSLSAWKPASKPSRKIEKSPVEVNAAEEKKXX 60
MS R RS+N E E R VLGP GNK KP P K+EK +E + K
Sbjct: 1 MSVPPRFRSVNSDEREFRSVLGPTGNKLQR----KP---PGMKLEKPMMEKTIIDSKDEK 53
Query: 61 XXXXXXXXXXXXXXXXXXHSLSVPSILRRHEXXXXXXXXXXXXXXXXXXTDSFHSRASIG 120
S SILR++ S S +S
Sbjct: 54 AKKPTTPASPRTTLKQCSSLCS--SILRKNSASMTASYSSDASSSCESSPLSVASSSSCK 111
Query: 121 RLTR-SNSVGIRRKPFPSKPRSVVSDGGLDSPPPDGSQTKKRCAWVTPNTDPCYAAFHDE 179
++ R S SV RK K VS G + DG +KRCAW+TP DPCY AFHDE
Sbjct: 112 KVVRRSGSVSSTRKLSVGKEEEKVS-GDCFA---DG---RKRCAWITPKADPCYVAFHDE 164
Query: 180 EWGVPVHDDKKLFELLVLSGALSELTWPAILSKRHIFREVFVGFDPIAVSKLNXXXXXXX 239
EWGVPVHDDKKLFELL LSGAL+EL+W ILS+RHI REVF+ FDP+AV++LN
Sbjct: 165 EWGVPVHDDKKLFELLCLSGALAELSWTDILSRRHILREVFMDFDPVAVAELNDKKLTAP 224
Query: 240 XXXXXXXXXXXXXRAIIENARQISKV 265
R+I++N+R + K+
Sbjct: 225 GTAAISLLSEVKIRSILDNSRHVRKI 250
>TAIR|locus:2037268 [details] [associations]
symbol:AT1G75090 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006281 "DNA repair" evidence=IEA;ISS]
[GO:0006284 "base-excision repair" evidence=IEA] [GO:0008725
"DNA-3-methyladenine glycosylase activity" evidence=IEA;ISS]
[GO:0006306 "DNA methylation" evidence=RCA] InterPro:IPR005019
InterPro:IPR011257 Pfam:PF03352 EMBL:CP002684
GenomeReviews:CT485782_GR eggNOG:COG2818 KO:K01246 GO:GO:0008725
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150 UniGene:At.17945
EMBL:AY034999 EMBL:AY063008 IPI:IPI00546123 RefSeq:NP_565100.1
HSSP:P05100 ProteinModelPortal:Q94CA9 SMR:Q94CA9
EnsemblPlants:AT1G75090.1 GeneID:843846 KEGG:ath:AT1G75090
TAIR:At1g75090 HOGENOM:HOG000220754 InParanoid:Q94CA9 OMA:RETKSHE
PhylomeDB:Q94CA9 ProtClustDB:CLSN2722806 ArrayExpress:Q94CA9
Genevestigator:Q94CA9 Uniprot:Q94CA9
Length = 329
Score = 290 (107.1 bits), Expect = 1.6e-28, Sum P(2) = 1.6e-28
Identities = 54/106 (50%), Positives = 68/106 (64%)
Query: 160 KRCAWVTPNTDPCYAAFHDEEWGVPVHDDKKLFELLVLSGALSELTWPAILSKRHIFREV 219
KRC W+TPN+DP Y FHDEEWGVPV DDKKLFELLV S AL+E +WP+IL +R FR++
Sbjct: 119 KRCHWITPNSDPIYVLFHDEEWGVPVRDDKKLFELLVFSQALAEFSWPSILRRRDDFRKL 178
Query: 220 FVGFDPIAVSKLNXXXXXXXXXXXXXXXXXXXXRAIIENARQISKV 265
F FDP A+++ RAI+ENA+ + KV
Sbjct: 179 FEEFDPSAIAQFTEKRLMSLRVNGCLILSEQKLRAIVENAKSVLKV 224
Score = 43 (20.2 bits), Expect = 1.6e-28, Sum P(2) = 1.6e-28
Identities = 16/51 (31%), Positives = 25/51 (49%)
Query: 1 MSGATRVRSMNVAESETRPVLGPAGNK---TGSLSAWKPASKPSRKIEKSP 48
MS +++RS E+R +L GN+ T + KP P ++ KSP
Sbjct: 1 MSIVSKLRSPVKPIDESRAILCSTGNRFKVTKTEMTKKPQLNP--RVTKSP 49
>TAIR|locus:2156329 [details] [associations]
symbol:AT5G44680 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006281 "DNA repair" evidence=IEA;ISS]
[GO:0006284 "base-excision repair" evidence=IEA] [GO:0008725
"DNA-3-methyladenine glycosylase activity" evidence=IEA;ISS]
[GO:0009637 "response to blue light" evidence=RCA] [GO:0010155
"regulation of proton transport" evidence=RCA] [GO:0046777 "protein
autophosphorylation" evidence=RCA] InterPro:IPR005019
InterPro:IPR011257 Pfam:PF03352 EMBL:CP002688 KO:K01246
GO:GO:0008725 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
EMBL:AB016874 HSSP:P05100 EMBL:BT003900 EMBL:BT004932
IPI:IPI00531451 RefSeq:NP_199281.1 UniGene:At.23434
ProteinModelPortal:Q9FIZ5 SMR:Q9FIZ5 EnsemblPlants:AT5G44680.1
GeneID:834497 KEGG:ath:AT5G44680 TAIR:At5g44680 InParanoid:Q9FIZ5
OMA:NTFREAF PhylomeDB:Q9FIZ5 ProtClustDB:CLSN2916729
ArrayExpress:Q9FIZ5 Genevestigator:Q9FIZ5 Uniprot:Q9FIZ5
Length = 353
Score = 241 (89.9 bits), Expect = 2.1e-23, Sum P(2) = 2.1e-23
Identities = 47/109 (43%), Positives = 66/109 (60%)
Query: 157 QTKKRCAWVTPNTDPCYAAFHDEEWGVPVHDDKKLFELLVLSGALSELTWPAILSKRHIF 216
+ KKRC+++T ++DP Y A+HD+EWGVPVHDD LFELLVL+GA W ++L +R+ F
Sbjct: 161 EKKKRCSFITTSSDPIYVAYHDKEWGVPVHDDNLLFELLVLTGAQVGSDWTSVLKRRNTF 220
Query: 217 REVFVGFDPIAVSKLNXXXXXXXXXXXXXXXXXXXXRAIIENARQISKV 265
RE F GF+ V+ N A+++NA+QI KV
Sbjct: 221 REAFSGFEAELVADFNEKKIQSIVNDYGINLSQVL--AVVDNAKQILKV 267
Score = 43 (20.2 bits), Expect = 2.1e-23, Sum P(2) = 2.1e-23
Identities = 15/43 (34%), Positives = 20/43 (46%)
Query: 11 NVAESETRPVLGPAGNKTGSL----SAWKPASKPSRKI-EKSP 48
N+++ RPVL P N+ +L S K KP I K P
Sbjct: 13 NISQINGRPVLQPKSNQVPTLDRRNSLKKSPPKPLNPIASKIP 55
>TAIR|locus:2087710 [details] [associations]
symbol:AT3G12710 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA;ISS] [GO:0006284 "base-excision repair"
evidence=IEA] [GO:0008725 "DNA-3-methyladenine glycosylase
activity" evidence=IEA;ISS] [GO:0006306 "DNA methylation"
evidence=RCA] InterPro:IPR005019 InterPro:IPR011257 Pfam:PF03352
EMBL:CP002686 KO:K01246 GO:GO:0008725 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 EMBL:AB024033 HSSP:P05100
IPI:IPI00517252 RefSeq:NP_566433.1 UniGene:At.23022
ProteinModelPortal:Q9LTW3 SMR:Q9LTW3 EnsemblPlants:AT3G12710.1
GeneID:820453 KEGG:ath:AT3G12710 TAIR:At3g12710 InParanoid:Q9LTW3
OMA:SCPRHRV PhylomeDB:Q9LTW3 ProtClustDB:CLSN2914975
Genevestigator:Q9LTW3 Uniprot:Q9LTW3
Length = 312
Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 47/113 (41%), Positives = 67/113 (59%)
Query: 153 PDGSQTKKRCAWVTPNTDPCYAAFHDEEWGVPVHDDKKLFELLVLSGALSELTWPAILSK 212
P+ + +RC+++TP +DP Y A+HDEEWGVPVHDDK LFELL LSGA W + L K
Sbjct: 115 PNPNPHPQRCSFLTPTSDPIYVAYHDEEWGVPVHDDKTLFELLTLSGAQVGSDWTSTLRK 174
Query: 213 RHIFREVFVGFDPIAVSKLNXXXXXXXXXXXXXXXXXXXXRAIIENARQISKV 265
RH +R+ F+ F+ V+KL R ++ENA++I ++
Sbjct: 175 RHDYRKAFMEFEAEVVAKLTEKEMNAISIEYKIEMSKV--RGVVENAKKIVEI 225
>TAIR|locus:1006230719 [details] [associations]
symbol:AT1G13635 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006284 "base-excision repair" evidence=IEA] [GO:0008725
"DNA-3-methyladenine glycosylase activity" evidence=IEA]
InterPro:IPR005019 InterPro:IPR011257 Pfam:PF03352 EMBL:CP002684
KO:K01246 GO:GO:0008725 GO:GO:0006284 Gene3D:1.10.340.30
SUPFAM:SSF48150 IPI:IPI00521326 RefSeq:NP_001184988.1
RefSeq:NP_973818.1 UniGene:At.19663 ProteinModelPortal:F4HSJ2
SMR:F4HSJ2 EnsemblPlants:AT1G13635.1 EnsemblPlants:AT1G13635.2
GeneID:2745751 KEGG:ath:AT1G13635 OMA:HNWTEIL Uniprot:F4HSJ2
Length = 311
Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 44/112 (39%), Positives = 60/112 (53%)
Query: 154 DGSQTKKRCAWVTPNTDPCYAAFHDEEWGVPVHDDKKLFELLVLSGALSELTWPAILSKR 213
+ S KRC W+T +D Y FHD++WGVPV+DD LFE L +SG L + W IL ++
Sbjct: 109 NSSDEPKRCNWITKKSDEVYVMFHDQQWGVPVYDDNLLFEFLAMSGMLMDYNWTEILKRK 168
Query: 214 HIFREVFVGFDPIAVSKLNXXXXXXXXXXXXXXXXXXXXRAIIENARQISKV 265
FRE F FDP V+K+ R I++NA+ I+KV
Sbjct: 169 EHFREAFCEFDPNRVAKMGEKEIAEIASNKAIMLQESRVRCIVDNAKCITKV 220
>TIGR_CMR|GSU_0567 [details] [associations]
symbol:GSU_0567 "DNA-3-methyladenine glycosylase I"
species:243231 "Geobacter sulfurreducens PCA" [GO:0006281 "DNA
repair" evidence=ISS] [GO:0008725 "DNA-3-methyladenine glycosylase
activity" evidence=ISS] InterPro:IPR004597 InterPro:IPR005019
InterPro:IPR011257 Pfam:PF03352 HOGENOM:HOG000220753 KO:K01246
GO:GO:0008725 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
TIGRFAMs:TIGR00624 EMBL:AE017180 GenomeReviews:AE017180_GR
RefSeq:NP_951625.1 ProteinModelPortal:Q74FN9 SMR:Q74FN9
GeneID:2685903 KEGG:gsu:GSU0567 PATRIC:22023883 OMA:HELFEYL
ProtClustDB:CLSK746102 BioCyc:GSUL243231:GH27-592-MONOMER
Uniprot:Q74FN9
Length = 191
Score = 213 (80.0 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 42/106 (39%), Positives = 55/106 (51%)
Query: 160 KRCAWVTPNTDPCYAAFHDEEWGVPVHDDKKLFELLVLSGALSELTWPAILSKRHIFREV 219
+RC W TDP Y A+HD EWGVP HDD+ LFE+L+L GA + L+W IL KR +R
Sbjct: 3 QRCEWC--GTDPLYVAYHDGEWGVPAHDDRHLFEMLILEGAQAGLSWLTILRKREAYRRA 60
Query: 220 FVGFDPIAVSKLNXXXXXXXXXXXXXXXXXXXXRAIIENARQISKV 265
F GFD V+ + + I NAR + K+
Sbjct: 61 FAGFDAETVAAWSEADVARLLADPGIVRNRLKIESTIRNARGVLKI 106
>TIGR_CMR|CBU_0383 [details] [associations]
symbol:CBU_0383 "DNA-3-methyladenine glycosidase I"
species:227377 "Coxiella burnetii RSA 493" [GO:0006281 "DNA repair"
evidence=ISS] [GO:0008725 "DNA-3-methyladenine glycosylase
activity" evidence=ISS] InterPro:IPR004597 InterPro:IPR005019
InterPro:IPR011257 Pfam:PF03352 HOGENOM:HOG000220753 KO:K01246
OMA:KCGENFS GO:GO:0008725 GO:GO:0006284 Gene3D:1.10.340.30
SUPFAM:SSF48150 TIGRFAMs:TIGR00624 EMBL:AE016828
GenomeReviews:AE016828_GR RefSeq:NP_819422.2 GeneID:1208266
KEGG:cbu:CBU_0383 PATRIC:17929461 ProtClustDB:CLSK914033
BioCyc:CBUR227377:GJ7S-384-MONOMER Uniprot:Q83EE1
Length = 212
Score = 204 (76.9 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 42/107 (39%), Positives = 58/107 (54%)
Query: 159 KKRCAWVTPNTDPCYAAFHDEEWGVPVHDDKKLFELLVLSGALSELTWPAILSKRHIFRE 218
K+RCAWV+ DP Y +HD EWGVP++DD+ LFE L+L G + L+W IL KR+ +R+
Sbjct: 18 KERCAWVS--NDPLYIHYHDLEWGVPIYDDRLLFEFLILEGMQAGLSWLTILKKRNNYRD 75
Query: 219 VFVGFDPIAVSKLNXXXXXXXXXXXXXXXXXXXXRAIIENARQISKV 265
F FD +SK N +A I NA+ +V
Sbjct: 76 SFNNFDASIISKYNPRKIDRLLENAGIIRNKLKIQATINNAKAFLEV 122
>UNIPROTKB|P05100 [details] [associations]
symbol:tag "3-methyl-adenine DNA glycosylase I,
constitutive" species:83333 "Escherichia coli K-12" [GO:0006284
"base-excision repair" evidence=IEA] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0008725 "DNA-3-methyladenine glycosylase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
InterPro:IPR004597 InterPro:IPR005019 InterPro:IPR011257
Pfam:PF03352 ECOGENE:EG10986 EMBL:J02606 EMBL:X03845 EMBL:U00039
EMBL:U00096 EMBL:AP009048 PIR:A24604 RefSeq:NP_418005.1
RefSeq:YP_491887.1 PDB:1LMZ PDB:1NKU PDB:1P7M PDBsum:1LMZ
PDBsum:1NKU PDBsum:1P7M ProteinModelPortal:P05100 SMR:P05100
DIP:DIP-10950N IntAct:P05100 MINT:MINT-1230071
EnsemblBacteria:EBESCT00000001171 EnsemblBacteria:EBESCT00000015713
GeneID:12932561 GeneID:947137 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR KEGG:ecj:Y75_p3628 KEGG:eco:b3549
PATRIC:32122570 EchoBASE:EB0979 eggNOG:COG2818 HOGENOM:HOG000220753
KO:K01246 OMA:KCGENFS ProtClustDB:PRK10353
BioCyc:EcoCyc:EG10986-MONOMER BioCyc:ECOL316407:JW3518-MONOMER
BioCyc:MetaCyc:EG10986-MONOMER EvolutionaryTrace:P05100
Genevestigator:P05100 GO:GO:0008725 GO:GO:0046872 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 TIGRFAMs:TIGR00624
Uniprot:P05100
Length = 187
Score = 195 (73.7 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 40/101 (39%), Positives = 53/101 (52%)
Query: 160 KRCAWVTPNTDPCYAAFHDEEWGVPVHDDKKLFELLVLSGALSELTWPAILSKRHIFREV 219
+RC WV+ DP Y A+HD EWGVP D KKLFE++ L G + L+W +L KR +R
Sbjct: 2 ERCGWVSQ--DPLYIAYHDNEWGVPETDSKKLFEMICLEGQQAGLSWITVLKKRENYRAC 59
Query: 220 FVGFDPIAVSKLNXXXXXXXXXXXXXXXXXXXXRAIIENAR 260
F FDP+ V+ + +AII NAR
Sbjct: 60 FHQFDPVKVAAMQEEDVERLVQDAGIIRHRGKIQAIIGNAR 100
>TIGR_CMR|CPS_2351 [details] [associations]
symbol:CPS_2351 "DNA-3-methyladenine glycosylase I"
species:167879 "Colwellia psychrerythraea 34H" [GO:0006281 "DNA
repair" evidence=ISS] [GO:0008725 "DNA-3-methyladenine glycosylase
activity" evidence=ISS] InterPro:IPR005019 InterPro:IPR011257
Pfam:PF03352 eggNOG:COG2818 HOGENOM:HOG000220753 KO:K01246
GO:GO:0008725 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
EMBL:CP000083 GenomeReviews:CP000083_GR RefSeq:YP_269071.1
ProteinModelPortal:Q482E7 STRING:Q482E7 GeneID:3521376
KEGG:cps:CPS_2351 PATRIC:21467793 OMA:PNELVIC
ProtClustDB:CLSK742465 BioCyc:CPSY167879:GI48-2416-MONOMER
Uniprot:Q482E7
Length = 194
Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 40/110 (36%), Positives = 55/110 (50%)
Query: 161 RCAWV-TPNTDPCYAAFHDEEWGVPVHDDKKLFELLVLSGALSELTWPAILSKRHIFREV 219
RC W+ T D Y +HDEEWGVPV++DKK+FE LVL A + L+W IL KR +R++
Sbjct: 8 RCPWLDTSKLD--YVKYHDEEWGVPVYEDKKMFESLVLESAQAGLSWYTILKKREGYRKL 65
Query: 220 FVGFDPIAVSKLNXXXXXXXXXXXXXXXXXXXXRAIIENARQISKVDFYF 269
F F+ V+K A I NA + ++ F
Sbjct: 66 FADFEVTKVAKFTDDDVERLMQDASIVRYRRKIEAAINNANRFIEIQNEF 115
>TIGR_CMR|SPO_1900 [details] [associations]
symbol:SPO_1900 "DNA-3-methyladenine glycosylase I"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0006281 "DNA repair"
evidence=ISS] [GO:0008725 "DNA-3-methyladenine glycosylase
activity" evidence=ISS] InterPro:IPR005019 InterPro:IPR011257
Pfam:PF03352 EMBL:CP000031 GenomeReviews:CP000031_GR
HOGENOM:HOG000220753 KO:K01246 GO:GO:0008725 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 RefSeq:YP_167136.1
ProteinModelPortal:Q5LS69 GeneID:3195713 KEGG:sil:SPO1900
PATRIC:23377131 OMA:WRTILAK ProtClustDB:CLSK713517 Uniprot:Q5LS69
Length = 202
Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 41/112 (36%), Positives = 55/112 (49%)
Query: 151 PPPDGSQTKKRCAWVTPNTDPCYAAFHDEEWGVPVHDDKKLFELLVLSGALSELTWPAIL 210
P PDG + RC W N+ P + +HD EWG PV DD++LFE L L S L+W IL
Sbjct: 6 PGPDG---QPRCRWC--NSAPEFFDYHDREWGYPVGDDRRLFEKLCLESFQSGLSWRTIL 60
Query: 211 SKRHIFREVFVGFDPIAVSKLNXXXXXXXXXXXXXXXXXXXXRAIIENARQI 262
+KR FR F GFD ++ + A+I NAR++
Sbjct: 61 AKRENFRAAFDGFDWTRIAAYDAADVARLLDDAGIIRHRGKIEAVINNARRM 112
>UNIPROTKB|Q0C3V6 [details] [associations]
symbol:tag "DNA-3-methyladenine glycosylase I"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006281 "DNA
repair" evidence=ISS] [GO:0008725 "DNA-3-methyladenine glycosylase
activity" evidence=ISS] InterPro:IPR005019 InterPro:IPR011257
Pfam:PF03352 eggNOG:COG2818 HOGENOM:HOG000220753 KO:K01246
GO:GO:0008725 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
GO:GO:0006281 EMBL:CP000158 GenomeReviews:CP000158_GR
RefSeq:YP_759587.1 ProteinModelPortal:Q0C3V6 SMR:Q0C3V6
STRING:Q0C3V6 GeneID:4288756 KEGG:hne:HNE_0860 PATRIC:32214528
OMA:LVECISY ProtClustDB:CLSK2531831
BioCyc:HNEP228405:GI69-902-MONOMER Uniprot:Q0C3V6
Length = 193
Score = 174 (66.3 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 39/99 (39%), Positives = 48/99 (48%)
Query: 162 CAWVTPNTDPCYAAFHDEEWGVPVHDDKKLFELLVLSGALSELTWPAILSKRHIFREVFV 221
C W P TDP Y A+HDEEWGVP D + L+E L L G + L+W IL KR RE F
Sbjct: 7 CGWA-PVTDPIYRAYHDEEWGVPERDPRALWEKLQLDGMQAGLSWITILRKRESIREEFD 65
Query: 222 GFDPIAVSKLNXXXXXXXXXXXXXXXXXXXXRAIIENAR 260
FDP +++ A+I NAR
Sbjct: 66 EFDPEKLARWTPRRAEKALTNPGIIRSPKKIDAVIGNAR 104
>UNIPROTKB|Q9KRH0 [details] [associations]
symbol:VC1672 "DNA-3-methyladenine glycosidase I"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0006281 "DNA repair" evidence=ISS] [GO:0008725
"DNA-3-methyladenine glycosylase activity" evidence=ISS]
InterPro:IPR005019 InterPro:IPR011257 Pfam:PF03352 KO:K01246
GO:GO:0008725 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
GenomeReviews:AE003852_GR GO:GO:0006281 HSSP:P05100 OMA:FKMLILE
EMBL:AE004245 PIR:E82171 RefSeq:NP_231308.1
ProteinModelPortal:Q9KRH0 DNASU:2613803 GeneID:2613803
KEGG:vch:VC1672 PATRIC:20082406 ProtClustDB:CLSK874490
Uniprot:Q9KRH0
Length = 193
Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 30/63 (47%), Positives = 40/63 (63%)
Query: 162 CAWVTPNTDPCYAAFHDEEWGVPVHDDKKLFELLVLSGALSELTWPAILSKRHIFREVFV 221
CAW + P +HD+EWG VHDD KLFE L L GA + L+W +L KR +R+ F+
Sbjct: 9 CAWAMNH--PLEREYHDKEWGRAVHDDTKLFEFLTLEGAQAGLSWLTVLKKREGYRQAFL 66
Query: 222 GFD 224
G+D
Sbjct: 67 GYD 69
>TIGR_CMR|VC_1672 [details] [associations]
symbol:VC_1672 "DNA-3-methyladenine glycosidase I"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006281 "DNA
repair" evidence=ISS] [GO:0008725 "DNA-3-methyladenine glycosylase
activity" evidence=ISS] InterPro:IPR005019 InterPro:IPR011257
Pfam:PF03352 KO:K01246 GO:GO:0008725 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 GenomeReviews:AE003852_GR
GO:GO:0006281 HSSP:P05100 OMA:FKMLILE EMBL:AE004245 PIR:E82171
RefSeq:NP_231308.1 ProteinModelPortal:Q9KRH0 DNASU:2613803
GeneID:2613803 KEGG:vch:VC1672 PATRIC:20082406
ProtClustDB:CLSK874490 Uniprot:Q9KRH0
Length = 193
Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 30/63 (47%), Positives = 40/63 (63%)
Query: 162 CAWVTPNTDPCYAAFHDEEWGVPVHDDKKLFELLVLSGALSELTWPAILSKRHIFREVFV 221
CAW + P +HD+EWG VHDD KLFE L L GA + L+W +L KR +R+ F+
Sbjct: 9 CAWAMNH--PLEREYHDKEWGRAVHDDTKLFEFLTLEGAQAGLSWLTVLKKREGYRQAFL 66
Query: 222 GFD 224
G+D
Sbjct: 67 GYD 69
>TIGR_CMR|SO_0016 [details] [associations]
symbol:SO_0016 "DNA-3-methyladenine glycosidase I"
species:211586 "Shewanella oneidensis MR-1" [GO:0006281 "DNA
repair" evidence=ISS] [GO:0008725 "DNA-3-methyladenine glycosylase
activity" evidence=ISS] InterPro:IPR004597 InterPro:IPR005019
InterPro:IPR011257 Pfam:PF03352 HOGENOM:HOG000220753 KO:K01246
GO:GO:0008725 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
TIGRFAMs:TIGR00624 EMBL:AE014299 GenomeReviews:AE014299_GR
HSSP:P05100 RefSeq:NP_715658.1 ProteinModelPortal:Q8EKS4 SMR:Q8EKS4
GeneID:1167914 KEGG:son:SO_0016 PATRIC:23519723 OMA:FKMLILE
ProtClustDB:CLSK905542 Uniprot:Q8EKS4
Length = 191
Score = 155 (59.6 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 32/100 (32%), Positives = 47/100 (47%)
Query: 161 RCAWVTPNTDPCYAAFHDEEWGVPVHDDKKLFELLVLSGALSELTWPAILSKRHIFREVF 220
RC WV+ DP Y +HD WG PV+D K+LF L L G + L+W IL K+ + + F
Sbjct: 5 RCNWVSD--DPLYRDYHDNVWGRPVYDPKELFAKLCLDGQQAGLSWITILKKQQNYEQAF 62
Query: 221 VGFDPIAVSKLNXXXXXXXXXXXXXXXXXXXXRAIIENAR 260
F+P ++ + +II NA+
Sbjct: 63 ADFEPAVIATFDDAKVEELMANPGIVRNRLKIHSIIRNAK 102
>DICTYBASE|DDB_G0271050 [details] [associations]
symbol:magA "methyladenine glycosylase" species:44689
"Dictyostelium discoideum" [GO:0008725 "DNA-3-methyladenine
glycosylase activity" evidence=IEA;ISS] [GO:0006284 "base-excision
repair" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA;ISS]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR005019
InterPro:IPR011257 Pfam:PF03352 dictyBase:DDB_G0271050
EMBL:AAFI02000005 GenomeReviews:CM000150_GR eggNOG:COG2818
KO:K01246 GO:GO:0008725 GO:GO:0006284 Gene3D:1.10.340.30
SUPFAM:SSF48150 GO:GO:0006281 RefSeq:XP_001134476.1
ProteinModelPortal:Q1ZXP8 SMR:Q1ZXP8 STRING:Q1ZXP8
EnsemblProtists:DDB0232992 GeneID:8617613 KEGG:ddi:DDB_G0271050
InParanoid:Q1ZXP8 ProtClustDB:CLSZ2733540 Uniprot:Q1ZXP8
Length = 290
Score = 156 (60.0 bits), Expect = 5.1e-11, P = 5.1e-11
Identities = 34/110 (30%), Positives = 52/110 (47%)
Query: 158 TKKRCAWVTPNTDPCYAAFHDEEWGVPVHDDKKLFELLVLSGALSELTWPAILSKRHIFR 217
+KKRC W++ D Y +HD EWG D ++LFE + L + L+W +L KR +R
Sbjct: 89 SKKRCFWISLTKDEEYIHYHDNEWGKENRDSQRLFEKICLEAQQAGLSWITVLKKRQNYR 148
Query: 218 EVFVGFDP-IAVSKLN-XXXXXXXXXXXXXXXXXXXXRAIIENARQISKV 265
+ F FDP + V + +AI++NAR K+
Sbjct: 149 DSFYNFDPKLIVDNITPEVIENSLMKNTGLIRNRLKLQAIVDNARAYLKM 198
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.131 0.394 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 271 213 0.00084 112 3 11 22 0.40 33
31 0.49 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 17
No. of states in DFA: 613 (65 KB)
Total size of DFA: 175 KB (2101 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 16.91u 0.19s 17.10t Elapsed: 00:00:00
Total cpu time: 16.91u 0.19s 17.10t Elapsed: 00:00:00
Start: Thu May 9 15:14:08 2013 End: Thu May 9 15:14:08 2013