Query 024161
Match_columns 271
No_of_seqs 246 out of 1583
Neff 8.6
Searched_HMMs 46136
Date Fri Mar 29 02:32:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024161.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/024161hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK10146 aminoalkylphosphonic 99.8 6.8E-19 1.5E-23 138.9 13.6 137 78-244 2-138 (144)
2 KOG3216 Diamine acetyltransfer 99.8 9.5E-18 2E-22 129.8 15.4 145 78-244 2-146 (163)
3 COG1247 Sortase and related ac 99.8 1.1E-17 2.4E-22 134.4 16.4 164 80-267 2-166 (169)
4 TIGR02382 wecD_rffC TDP-D-fuco 99.8 3.8E-17 8.2E-22 135.8 16.6 142 79-244 43-185 (191)
5 TIGR03827 GNAT_ablB putative b 99.7 4.7E-17 1E-21 142.1 16.3 138 76-249 112-250 (266)
6 PRK10975 TDP-fucosamine acetyl 99.7 2.2E-16 4.7E-21 131.5 16.8 143 79-245 46-189 (194)
7 PRK10140 putative acetyltransf 99.7 5.4E-16 1.2E-20 124.5 18.2 143 79-249 3-146 (162)
8 PRK03624 putative acetyltransf 99.7 3E-16 6.6E-21 122.4 15.6 128 80-244 3-130 (140)
9 PTZ00330 acetyltransferase; Pr 99.7 5.3E-16 1.1E-20 122.8 17.2 137 78-244 5-141 (147)
10 PRK09491 rimI ribosomal-protei 99.7 3.4E-16 7.3E-21 124.1 15.2 129 80-249 2-130 (146)
11 PHA00673 acetyltransferase dom 99.7 8.8E-16 1.9E-20 121.7 14.3 136 84-244 11-146 (154)
12 PF13420 Acetyltransf_4: Acety 99.7 2E-15 4.4E-20 120.6 16.4 143 82-249 1-144 (155)
13 TIGR02406 ectoine_EctA L-2,4-d 99.7 7.7E-16 1.7E-20 124.0 13.6 128 82-244 1-128 (157)
14 PF13673 Acetyltransf_10: Acet 99.7 8.5E-16 1.8E-20 116.8 12.8 117 91-239 1-117 (117)
15 PF00583 Acetyltransf_1: Acety 99.7 9.8E-16 2.1E-20 109.3 11.7 79 156-240 5-83 (83)
16 TIGR03103 trio_acet_GNAT GNAT- 99.7 2.4E-15 5.1E-20 143.4 17.2 139 76-244 79-217 (547)
17 KOG3139 N-acetyltransferase [G 99.7 3.2E-15 6.8E-20 117.1 14.1 95 139-249 57-151 (165)
18 PLN02706 glucosamine 6-phospha 99.7 9.1E-15 2E-19 116.4 16.7 139 78-244 5-144 (150)
19 PF13523 Acetyltransf_8: Acety 99.6 7.2E-15 1.6E-19 117.3 15.4 141 82-245 1-142 (152)
20 TIGR01575 rimI ribosomal-prote 99.6 6.4E-15 1.4E-19 113.6 14.4 121 91-249 1-121 (131)
21 COG0456 RimI Acetyltransferase 99.6 1.1E-14 2.4E-19 118.7 15.3 146 77-249 9-159 (177)
22 PRK10809 ribosomal-protein-S5- 99.6 5.6E-14 1.2E-18 116.8 19.8 153 76-249 14-171 (194)
23 PRK10151 ribosomal-protein-L7/ 99.6 2.3E-14 5.1E-19 117.5 17.1 165 77-266 8-177 (179)
24 TIGR03448 mycothiol_MshD mycot 99.6 2E-14 4.4E-19 126.8 17.5 144 76-245 146-289 (292)
25 PF13527 Acetyltransf_9: Acety 99.6 2E-14 4.3E-19 111.0 13.9 127 81-242 1-127 (127)
26 PRK10514 putative acetyltransf 99.6 1.7E-14 3.7E-19 113.9 13.5 126 80-246 2-128 (145)
27 PRK07922 N-acetylglutamate syn 99.6 3.5E-14 7.5E-19 115.8 15.0 124 78-245 4-128 (169)
28 COG1246 ArgA N-acetylglutamate 99.6 4.2E-14 9E-19 110.8 12.8 122 81-244 2-123 (153)
29 PRK10562 putative acetyltransf 99.6 1.5E-13 3.3E-18 108.9 16.2 124 82-244 2-125 (145)
30 KOG3396 Glucosamine-phosphate 99.6 7.8E-14 1.7E-18 105.9 13.4 141 76-244 3-144 (150)
31 PRK07757 acetyltransferase; Pr 99.6 1.3E-13 2.7E-18 110.0 14.0 122 80-245 2-123 (152)
32 PRK09831 putative acyltransfer 99.5 6.2E-14 1.3E-18 111.4 11.8 125 81-246 2-128 (147)
33 TIGR01686 FkbH FkbH-like domai 99.5 1.5E-13 3.2E-18 123.2 15.5 133 76-242 183-319 (320)
34 PRK15130 spermidine N1-acetylt 99.5 2.9E-13 6.3E-18 111.7 16.1 146 77-249 4-150 (186)
35 PHA01807 hypothetical protein 99.5 1.6E-13 3.6E-18 109.6 14.1 126 89-237 11-136 (153)
36 TIGR03585 PseH pseudaminic aci 99.5 2.1E-13 4.5E-18 108.9 13.8 150 81-260 2-152 (156)
37 PF13302 Acetyltransf_3: Acety 99.5 4.5E-13 9.8E-18 105.0 14.8 140 80-240 2-142 (142)
38 PLN02825 amino-acid N-acetyltr 99.5 9.9E-14 2.1E-18 130.1 12.6 122 81-244 369-490 (515)
39 PRK12308 bifunctional arginino 99.5 2E-13 4.4E-18 132.1 13.8 126 76-245 460-585 (614)
40 PRK05279 N-acetylglutamate syn 99.5 3E-13 6.4E-18 126.3 13.0 123 80-244 295-417 (441)
41 PRK10314 putative acyltransfer 99.5 5.8E-13 1.3E-17 106.8 12.8 136 88-265 13-150 (153)
42 TIGR01890 N-Ac-Glu-synth amino 99.5 4.7E-13 1E-17 124.5 13.6 123 81-245 284-406 (429)
43 PF13508 Acetyltransf_7: Acety 99.5 1.3E-12 2.9E-17 92.7 11.6 76 139-241 4-79 (79)
44 COG3153 Predicted acetyltransf 99.5 3.9E-12 8.4E-17 102.6 15.6 151 80-270 4-155 (171)
45 TIGR03448 mycothiol_MshD mycot 99.5 1.8E-12 3.8E-17 114.5 14.4 121 88-244 7-128 (292)
46 PRK01346 hypothetical protein; 99.4 7.1E-12 1.5E-16 116.0 14.5 135 78-247 5-139 (411)
47 KOG3235 Subunit of the major N 99.4 1.5E-12 3.3E-17 101.5 7.6 97 139-249 42-140 (193)
48 PRK13688 hypothetical protein; 99.3 1.1E-11 2.5E-16 99.5 10.7 88 140-245 47-134 (156)
49 PF08445 FR47: FR47-like prote 99.3 1.1E-11 2.3E-16 89.7 8.9 60 184-244 23-82 (86)
50 KOG2488 Acetyltransferase (GNA 99.3 2.6E-11 5.6E-16 97.6 11.6 93 139-247 93-185 (202)
51 cd02169 Citrate_lyase_ligase C 99.3 2.1E-11 4.5E-16 107.6 11.3 80 138-245 6-85 (297)
52 KOG3138 Predicted N-acetyltran 99.3 2.8E-11 6E-16 98.8 8.8 142 80-251 17-159 (187)
53 TIGR00124 cit_ly_ligase [citra 99.2 7.7E-10 1.7E-14 99.1 14.2 81 139-247 32-112 (332)
54 KOG3397 Acetyltransferases [Ge 99.1 8E-10 1.7E-14 87.6 11.8 138 76-249 9-146 (225)
55 COG3393 Predicted acetyltransf 99.1 6.8E-10 1.5E-14 94.2 12.2 76 157-244 187-262 (268)
56 COG1670 RimL Acetyltransferase 99.1 3.1E-09 6.7E-14 86.4 15.7 85 156-248 77-162 (187)
57 KOG3234 Acetyltransferase, (GN 99.1 6E-10 1.3E-14 87.0 8.1 111 140-267 43-153 (173)
58 TIGR01211 ELP3 histone acetylt 99.0 7.1E-09 1.5E-13 98.0 12.5 84 155-244 422-516 (522)
59 COG3981 Predicted acetyltransf 98.9 1.7E-08 3.6E-13 80.4 12.1 83 156-245 78-160 (174)
60 PF08444 Gly_acyl_tr_C: Aralky 98.8 1.9E-08 4.1E-13 72.0 6.9 74 155-244 7-80 (89)
61 COG2153 ElaA Predicted acyltra 98.8 5.1E-08 1.1E-12 75.4 8.9 94 156-266 59-153 (155)
62 PF13718 GNAT_acetyltr_2: GNAT 98.7 8.4E-07 1.8E-11 73.4 16.0 121 136-266 25-196 (196)
63 cd04301 NAT_SF N-Acyltransfera 98.7 1.8E-07 3.9E-12 61.5 8.2 56 157-221 9-64 (65)
64 COG3818 Predicted acetyltransf 98.5 5.8E-07 1.3E-11 68.3 8.1 69 177-245 79-149 (167)
65 PF12746 GNAT_acetyltran: GNAT 98.4 6.2E-06 1.3E-10 71.6 12.3 86 140-249 167-252 (265)
66 KOG4135 Predicted phosphogluco 98.3 9.4E-06 2E-10 63.1 11.2 111 134-245 60-171 (185)
67 PF12568 DUF3749: Acetyltransf 98.3 1.6E-05 3.4E-10 60.8 12.2 85 137-244 37-125 (128)
68 COG1444 Predicted P-loop ATPas 98.3 1.6E-05 3.5E-10 77.5 13.8 83 181-267 530-612 (758)
69 PF14542 Acetyltransf_CG: GCN5 98.2 3.8E-05 8.3E-10 54.2 11.3 64 157-237 9-72 (78)
70 KOG4144 Arylalkylamine N-acety 98.2 1.1E-06 2.5E-11 68.6 3.7 148 76-245 8-162 (190)
71 PF13480 Acetyltransf_6: Acety 98.0 0.00027 6E-09 54.7 13.4 116 79-223 19-135 (142)
72 COG4552 Eis Predicted acetyltr 98.0 9.8E-06 2.1E-10 71.7 5.4 87 140-244 41-127 (389)
73 COG3375 Uncharacterized conser 98.0 0.00029 6.2E-09 58.7 13.1 143 79-252 2-145 (266)
74 COG0454 WecD Histone acetyltra 98.0 1.3E-05 2.9E-10 58.1 4.9 44 188-239 87-130 (156)
75 COG2388 Predicted acetyltransf 97.8 9.1E-05 2E-09 54.5 6.8 63 140-222 17-79 (99)
76 TIGR03694 exosort_acyl putativ 97.8 0.00067 1.5E-08 58.4 13.2 145 79-244 7-198 (241)
77 COG3053 CitC Citrate lyase syn 97.6 0.0013 2.9E-08 57.0 12.4 74 156-248 46-119 (352)
78 PF00765 Autoind_synth: Autoin 97.6 0.0011 2.3E-08 54.6 11.1 135 89-247 7-158 (182)
79 PF06852 DUF1248: Protein of u 97.5 0.0032 7E-08 51.5 12.6 87 155-249 55-142 (181)
80 PF04958 AstA: Arginine N-succ 97.5 0.0041 8.8E-08 55.8 14.0 147 80-241 2-185 (342)
81 COG5628 Predicted acetyltransf 97.5 0.00084 1.8E-08 50.5 7.8 73 157-240 47-119 (143)
82 PRK13834 putative autoinducer 97.4 0.0073 1.6E-07 50.8 14.5 134 89-244 15-165 (207)
83 PRK10456 arginine succinyltran 97.3 0.0037 8.1E-08 55.9 11.9 117 80-211 2-148 (344)
84 TIGR03245 arg_AOST_alph argini 97.2 0.0053 1.1E-07 54.8 11.5 116 82-212 2-148 (336)
85 TIGR03243 arg_catab_AOST argin 97.1 0.0064 1.4E-07 54.3 11.1 116 82-212 2-147 (335)
86 TIGR03244 arg_catab_AstA argin 97.1 0.0071 1.5E-07 54.1 11.1 115 82-211 2-146 (336)
87 COG3916 LasI N-acyl-L-homoseri 96.9 0.034 7.4E-07 46.1 13.0 135 89-246 14-165 (209)
88 PF13880 Acetyltransf_13: ESCO 96.7 0.0023 5.1E-08 43.8 3.7 29 183-211 6-34 (70)
89 TIGR03827 GNAT_ablB putative b 96.3 0.012 2.7E-07 51.2 7.1 72 187-267 12-83 (266)
90 COG1243 ELP3 Histone acetyltra 96.3 0.0067 1.4E-07 55.9 5.1 51 191-244 459-509 (515)
91 PF05301 Mec-17: Touch recepto 96.3 0.065 1.4E-06 40.5 9.5 78 155-237 17-98 (120)
92 COG3882 FkbH Predicted enzyme 96.1 0.032 7E-07 51.9 8.3 138 77-244 411-550 (574)
93 TIGR03019 pepcterm_femAB FemAB 95.9 0.076 1.6E-06 47.7 10.1 135 75-245 147-282 (330)
94 PF02799 NMT_C: Myristoyl-CoA: 95.8 0.21 4.5E-06 41.2 11.3 140 82-249 31-170 (190)
95 COG3138 AstA Arginine/ornithin 95.4 0.075 1.6E-06 46.1 7.6 115 81-206 3-143 (336)
96 PF01233 NMT: Myristoyl-CoA:pr 95.4 0.64 1.4E-05 37.2 12.3 120 76-216 20-144 (162)
97 PF04768 DUF619: Protein of un 95.2 0.35 7.6E-06 39.3 10.6 121 79-241 19-143 (170)
98 cd04265 DUF619-NAGS-U DUF619 d 95.1 0.25 5.3E-06 36.4 8.5 43 181-228 33-75 (99)
99 cd04264 DUF619-NAGS DUF619 dom 95.0 0.2 4.3E-06 36.9 7.8 58 157-228 18-75 (99)
100 PF01853 MOZ_SAS: MOZ/SAS fami 94.9 0.095 2.1E-06 43.0 6.5 49 156-215 65-113 (188)
101 PLN03238 probable histone acet 94.9 0.15 3.2E-06 44.5 7.9 49 156-215 140-188 (290)
102 KOG3698 Hyaluronoglucosaminida 94.7 0.15 3.1E-06 48.5 7.8 58 188-245 822-879 (891)
103 PHA01733 hypothetical protein 93.9 0.078 1.7E-06 41.9 3.8 77 157-246 57-134 (153)
104 KOG2779 N-myristoyl transferas 93.6 0.88 1.9E-05 40.9 10.2 141 81-249 262-402 (421)
105 PHA00432 internal virion prote 93.6 0.51 1.1E-05 36.8 7.7 30 215-244 92-121 (137)
106 PLN03239 histone acetyltransfe 93.5 0.3 6.6E-06 43.8 7.3 48 157-215 199-246 (351)
107 PTZ00064 histone acetyltransfe 93.5 0.26 5.6E-06 46.2 7.0 49 156-215 369-417 (552)
108 KOG2535 RNA polymerase II elon 93.3 0.12 2.7E-06 46.1 4.4 49 193-244 498-547 (554)
109 PRK14852 hypothetical protein; 92.7 1.8 3.9E-05 44.4 12.1 147 79-249 28-186 (989)
110 PLN00104 MYST -like histone ac 92.2 0.29 6.3E-06 45.5 5.5 49 156-215 291-339 (450)
111 PF11090 DUF2833: Protein of u 91.6 2.1 4.5E-05 30.5 8.1 58 185-244 22-84 (86)
112 COG2401 ABC-type ATPase fused 91.3 0.12 2.5E-06 47.8 1.9 63 183-245 242-309 (593)
113 PRK01305 arginyl-tRNA-protein 90.5 10 0.00023 32.5 13.8 59 156-228 153-213 (240)
114 PF04377 ATE_C: Arginine-tRNA- 89.6 5.4 0.00012 30.8 9.5 61 156-228 48-108 (128)
115 PF04339 DUF482: Protein of un 89.3 4.8 0.0001 36.9 10.6 132 75-244 195-329 (370)
116 COG5630 ARG2 Acetylglutamate s 89.2 2 4.4E-05 39.0 7.8 84 91-211 346-430 (495)
117 cd04266 DUF619-NAGS-FABP DUF61 87.6 6.2 0.00013 29.5 8.4 49 180-234 37-87 (108)
118 KOG2779 N-myristoyl transferas 87.0 6.9 0.00015 35.3 9.6 56 156-215 145-200 (421)
119 KOG2747 Histone acetyltransfer 86.5 1.5 3.2E-05 40.2 5.4 31 184-214 262-292 (396)
120 PF13444 Acetyltransf_5: Acety 86.1 2.5 5.5E-05 30.9 5.7 48 157-204 41-100 (101)
121 KOG4601 Uncharacterized conser 85.5 1.7 3.8E-05 36.7 4.9 58 180-240 106-164 (264)
122 PF11124 Pho86: Inorganic phos 84.1 10 0.00022 33.6 9.2 83 157-244 179-271 (304)
123 PF09924 DUF2156: Uncharacteri 84.0 27 0.00059 30.7 12.3 116 78-225 131-248 (299)
124 KOG2696 Histone acetyltransfer 80.2 15 0.00032 33.4 9.0 85 134-228 178-262 (403)
125 COG5027 SAS2 Histone acetyltra 76.7 1.6 3.5E-05 39.1 1.9 56 136-207 232-287 (395)
126 KOG2036 Predicted P-loop ATPas 71.6 3.7 8E-05 40.4 3.1 29 184-212 616-644 (1011)
127 PHA02769 hypothetical protein; 69.4 8 0.00017 29.1 3.8 44 200-245 94-140 (154)
128 PRK04531 acetylglutamate kinas 65.6 45 0.00098 30.9 8.8 55 181-241 309-365 (398)
129 PF02388 FemAB: FemAB family; 64.2 68 0.0015 29.8 9.8 101 156-267 45-160 (406)
130 COG2935 Putative arginyl-tRNA: 63.0 63 0.0014 27.8 8.4 63 154-228 158-220 (253)
131 cd03173 DUF619-like DUF619 dom 62.1 60 0.0013 23.8 8.8 44 180-228 31-74 (98)
132 PF09390 DUF1999: Protein of u 62.1 77 0.0017 25.0 12.2 133 81-244 2-141 (161)
133 COG5092 NMT1 N-myristoyl trans 59.7 99 0.0022 27.7 9.3 114 81-215 83-198 (451)
134 COG5092 NMT1 N-myristoyl trans 57.1 1.4E+02 0.003 26.9 9.7 147 81-249 260-419 (451)
135 cd07235 MRD Mitomycin C resist 56.1 25 0.00054 25.7 4.6 27 218-245 3-29 (122)
136 PF12261 T_hemolysin: Thermost 51.8 1.3E+02 0.0029 24.6 9.8 80 156-242 44-140 (179)
137 PF02474 NodA: Nodulation prot 51.6 28 0.00061 28.3 4.2 52 183-238 86-137 (196)
138 PF07395 Mig-14: Mig-14; Inte 49.4 1E+02 0.0022 26.9 7.7 112 77-217 124-239 (264)
139 COG5653 Protein involved in ce 48.5 2.3E+02 0.005 26.4 10.2 58 157-226 282-339 (406)
140 cd08356 Glo_EDI_BRP_like_17 Th 46.7 24 0.00051 25.9 3.1 24 226-249 11-34 (113)
141 PF00925 GTP_cyclohydro2: GTP 45.2 33 0.00071 27.7 3.9 47 191-246 122-168 (169)
142 cd08350 BLMT_like BLMT, a bleo 44.7 33 0.00073 25.1 3.7 24 226-249 12-36 (120)
143 PRK15312 antimicrobial resista 42.9 1.4E+02 0.003 26.5 7.5 115 76-217 151-269 (298)
144 cd08353 Glo_EDI_BRP_like_7 Thi 42.9 27 0.00058 26.5 3.0 28 216-244 4-31 (142)
145 COG0807 RibA GTP cyclohydrolas 41.4 43 0.00093 27.8 4.0 53 187-248 119-171 (193)
146 cd09012 Glo_EDI_BRP_like_24 Th 37.0 32 0.00069 25.4 2.5 25 219-244 4-28 (124)
147 COG2266 GTP:adenosylcobinamide 35.1 83 0.0018 25.7 4.7 45 200-245 26-70 (177)
148 cd08344 MhqB_like_N N-terminal 34.0 71 0.0015 23.0 4.0 29 216-245 3-31 (112)
149 PF02100 ODC_AZ: Ornithine dec 33.3 2E+02 0.0044 21.3 6.4 55 190-245 30-88 (108)
150 PTZ00129 40S ribosomal protein 33.2 1.8E+02 0.004 23.0 6.2 45 200-244 74-129 (149)
151 cd07267 THT_Oxygenase_N N-term 32.1 44 0.00096 24.2 2.6 29 217-246 5-33 (113)
152 KOG3014 Protein involved in es 31.3 50 0.0011 28.5 2.9 32 181-212 182-213 (257)
153 PRK10150 beta-D-glucuronidase; 31.2 1.9E+02 0.004 28.4 7.4 69 180-248 289-359 (604)
154 COG3473 Maleate cis-trans isom 31.1 1E+02 0.0022 26.0 4.7 38 207-244 109-149 (238)
155 PRK02983 lysS lysyl-tRNA synth 31.0 3.2E+02 0.0069 29.1 9.3 58 156-225 430-487 (1094)
156 PF13380 CoA_binding_2: CoA bi 31.0 1.1E+02 0.0024 22.8 4.6 43 202-244 66-108 (116)
157 TIGR02990 ectoine_eutA ectoine 30.7 81 0.0017 27.0 4.2 43 202-244 106-151 (239)
158 PF04816 DUF633: Family of unk 30.6 98 0.0021 25.8 4.6 47 198-244 74-122 (205)
159 KOG4387 Ornithine decarboxylas 29.9 3.1E+02 0.0068 22.5 7.8 76 190-268 107-186 (191)
160 cd07253 Glo_EDI_BRP_like_2 Thi 29.2 1.1E+02 0.0023 21.9 4.3 31 215-246 3-34 (125)
161 PF12681 Glyoxalase_2: Glyoxal 29.1 53 0.0012 23.1 2.5 24 228-251 7-31 (108)
162 TIGR00505 ribA GTP cyclohydrol 28.3 1.1E+02 0.0023 25.2 4.4 46 191-245 121-166 (191)
163 PRK09318 bifunctional 3,4-dihy 28.0 87 0.0019 29.0 4.2 34 211-246 323-356 (387)
164 PRK00393 ribA GTP cyclohydrola 27.9 97 0.0021 25.7 4.1 47 190-245 123-169 (197)
165 cd08342 HPPD_N_like N-terminal 27.4 93 0.002 23.4 3.7 28 218-246 3-31 (136)
166 TIGR03645 glyox_marine lactoyl 26.4 68 0.0015 25.3 2.9 28 215-243 4-32 (162)
167 cd08362 BphC5-RrK37_N_like N-t 26.3 74 0.0016 22.9 2.9 34 215-249 3-37 (120)
168 cd08346 PcpA_N_like N-terminal 25.9 85 0.0018 22.6 3.2 29 216-245 2-31 (126)
169 PF02836 Glyco_hydro_2_C: Glyc 25.5 1.9E+02 0.004 25.3 5.8 67 181-247 13-81 (298)
170 PF08901 DUF1847: Protein of u 25.1 1E+02 0.0022 24.7 3.5 42 204-245 43-88 (157)
171 PRK09319 bifunctional 3,4-dihy 24.4 1.1E+02 0.0024 29.7 4.2 58 188-247 296-380 (555)
172 PRK09607 rps11p 30S ribosomal 24.3 3.4E+02 0.0074 21.0 6.4 45 200-244 55-110 (132)
173 TIGR03628 arch_S11P archaeal r 24.2 3.2E+02 0.0069 20.6 6.5 44 201-244 49-103 (114)
174 cd08357 Glo_EDI_BRP_like_18 Th 23.4 2E+02 0.0043 20.6 4.9 29 220-249 4-33 (125)
175 PF12953 DUF3842: Domain of un 23.0 2.2E+02 0.0048 22.0 4.9 47 194-244 7-53 (131)
176 cd07252 BphC1-RGP6_N_like N-te 22.5 1E+02 0.0022 22.5 3.1 28 216-244 3-31 (120)
177 cd07240 ED_TypeI_classII_N N-t 22.2 2.5E+02 0.0054 19.8 5.2 30 217-247 4-34 (117)
178 PRK14019 bifunctional 3,4-dihy 21.9 1.2E+02 0.0026 27.8 3.9 56 188-246 290-363 (367)
179 cd08352 Glo_EDI_BRP_like_1 Thi 21.9 1.2E+02 0.0027 21.6 3.4 29 215-244 3-32 (125)
180 PRK08815 GTP cyclohydrolase; P 21.5 1.3E+02 0.0029 27.7 4.1 34 211-246 308-341 (375)
181 cd07265 2_3_CTD_N N-terminal d 21.1 1.1E+02 0.0023 22.2 3.0 29 216-245 5-34 (122)
182 COG0346 GloA Lactoylglutathion 21.0 1.1E+02 0.0025 21.5 3.1 31 216-247 3-34 (138)
183 cd07255 Glo_EDI_BRP_like_12 Th 20.9 2.3E+02 0.005 20.3 4.8 32 217-249 4-36 (125)
184 PLN02831 Bifunctional GTP cycl 20.8 1.4E+02 0.003 28.3 4.1 36 209-246 374-409 (450)
185 PRK09311 bifunctional 3,4-dihy 20.8 1.4E+02 0.003 27.8 4.1 36 209-246 340-375 (402)
186 cd07254 Glo_EDI_BRP_like_20 Th 20.6 3.2E+02 0.007 19.5 5.5 31 219-249 3-35 (120)
187 cd08358 Glo_EDI_BRP_like_21 Th 20.4 2E+02 0.0044 21.8 4.4 19 226-244 12-31 (127)
188 PRK00756 acyltransferase NodA; 20.4 2.4E+02 0.0053 22.9 4.8 58 183-241 86-143 (196)
189 PF04015 DUF362: Domain of unk 20.2 1.8E+02 0.0039 23.8 4.4 46 199-244 20-67 (206)
No 1
>PRK10146 aminoalkylphosphonic acid N-acetyltransferase; Provisional
Probab=99.81 E-value=6.8e-19 Score=138.92 Aligned_cols=137 Identities=18% Similarity=0.132 Sum_probs=102.6
Q ss_pred CCeEEEEccCCcccHHHHHHHHHHhccCCccccchhhHHhhHHHHHHHHHHHHhcCCCCcceEEEEeeCCCCCCCCCCCc
Q 024161 78 YGWKVRKLVRVGEEMREVAFIQAEAFHNPVALFNDVFFEFFKAEVLSGLLYKLRNSPPDRYACLVAEHSNPNDNIEPQRK 157 (271)
Q Consensus 78 ~~~~IR~at~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Va~~~~~~~~~~~~~~ 157 (271)
+.++||+++ .+|++.+.+++.+...... + . ....+.+...+.. +...++|++.++ +
T Consensus 2 ~~~~ir~a~--~~D~~~l~~l~~~~~~~~~---~---~----~~~~~~~~~~l~~---~~~~~~v~~~~~---------~ 57 (144)
T PRK10146 2 PACELRPAT--QYDTDAVYALICELKQAEF---D---H----QAFRVGFNANLRD---PNMRYHLALLDG---------E 57 (144)
T ss_pred CccEEeeCc--HhhHHHHHHHHHHHhcccC---C---H----HHHHHHHHHHhcC---CCceEEEEEECC---------E
Confidence 357899998 9999999999887543211 1 0 1122233333322 234567887776 8
Q ss_pred EEEEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcEEEEEEEcCCHHHHHHHHhC
Q 024161 158 LVGVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEYLVLRAYEDDYGARRLYSNA 237 (271)
Q Consensus 158 iVG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y~k~ 237 (271)
+||++.+...... .......+|..++|+|+|||+|||+.|+++++++|++.|+..+.|++...|..|++||+|+
T Consensus 58 ivG~~~~~~~~~~------~~~~~~~~i~~l~v~p~~rg~GiG~~Ll~~~~~~a~~~~~~~i~l~~~~~n~~a~~fY~~~ 131 (144)
T PRK10146 58 VVGMIGLHLQFHL------HHVNWIGEIQELVVMPQARGLNVGSKLLAWAEEEARQAGAEMTELSTNVKRHDAHRFYLRE 131 (144)
T ss_pred EEEEEEEEecccc------cccchhheeheeEECHHHcCCCHHHHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHc
Confidence 9999998753210 1112345689999999999999999999999999999999999999999999999999999
Q ss_pred CCEEeec
Q 024161 238 GYRVVSS 244 (271)
Q Consensus 238 GF~~~~~ 244 (271)
||+..+.
T Consensus 132 Gf~~~~~ 138 (144)
T PRK10146 132 GYEQSHF 138 (144)
T ss_pred CCchhhh
Confidence 9987644
No 2
>KOG3216 consensus Diamine acetyltransferase [Amino acid transport and metabolism]
Probab=99.78 E-value=9.5e-18 Score=129.83 Aligned_cols=145 Identities=15% Similarity=0.075 Sum_probs=108.2
Q ss_pred CCeEEEEccCCcccHHHHHHHHHHhccCCccccchhhHHhhHHHHHHHHHHHHhcCCCCcceEEEEeeCCCCCCCCCCCc
Q 024161 78 YGWKVRKLVRVGEEMREVAFIQAEAFHNPVALFNDVFFEFFKAEVLSGLLYKLRNSPPDRYACLVAEHSNPNDNIEPQRK 157 (271)
Q Consensus 78 ~~~~IR~at~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Va~~~~~~~~~~~~~~ 157 (271)
..++||.+| ++|.+.|..++.+.-.= +-...+ ..-..+.|....-. +++.+.++|+..+.+ ++.
T Consensus 2 ~~~~IR~at--~~D~~~i~rLikela~F-ek~~~~------v~~te~~l~~~~F~-d~~~~~~~v~~ie~~------~~~ 65 (163)
T KOG3216|consen 2 DNIRIRLAT--PKDCEDILRLIKELAEF-EKLEDQ------VEATEENLARDGFI-DPPFKHWLVAAIETS------GEV 65 (163)
T ss_pred CceEEEecC--cccHHHHHHHHHHHHHH-HHhccc------hhhchhhhhhhhcc-CCCccEEEEEEEecC------CCc
Confidence 357899999 99999999998764210 000000 00012233332111 335566787765421 248
Q ss_pred EEEEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcEEEEEEEcCCHHHHHHHHhC
Q 024161 158 LVGVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEYLVLRAYEDDYGARRLYSNA 237 (271)
Q Consensus 158 iVG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y~k~ 237 (271)
|+|++......+.+.. ....||.+++|+|+|||+|+|+.|++.+.+.|.+.|+.+++..|..+|.+|+.||++.
T Consensus 66 ~aGf~~yf~~ystW~~------k~~iYleDlyV~e~yR~kG~Gs~Ll~~va~~A~~~G~~rv~w~vldwN~rAi~lY~k~ 139 (163)
T KOG3216|consen 66 VAGFALYFNNYSTWLG------KQGIYLEDLYVREQYRGKGIGSKLLKFVAEEADKLGTPRVEWVVLDWNHRAILLYEKV 139 (163)
T ss_pred eeEEeeeecccccccc------cceEEEEeeEecchhcccChHHHHHHHHHHHHHHcCCCcEEEEEeccchhHHHHHHHh
Confidence 9999999876654433 4778999999999999999999999999999999999999999999999999999999
Q ss_pred CCEEeec
Q 024161 238 GYRVVSS 244 (271)
Q Consensus 238 GF~~~~~ 244 (271)
|++....
T Consensus 140 gaq~l~~ 146 (163)
T KOG3216|consen 140 GAQDLKE 146 (163)
T ss_pred Cccccce
Confidence 9998877
No 3
>COG1247 Sortase and related acyltransferases [Cell envelope biogenesis, outer membrane]
Probab=99.78 E-value=1.1e-17 Score=134.39 Aligned_cols=164 Identities=20% Similarity=0.184 Sum_probs=124.3
Q ss_pred eEEEEccCCcccHHHHHHHHHHhccCCccccchhhHHhhHHHHHHHHHHHHhcCCCCcceEEEEeeCCCCCCCCCCCcEE
Q 024161 80 WKVRKLVRVGEEMREVAFIQAEAFHNPVALFNDVFFEFFKAEVLSGLLYKLRNSPPDRYACLVAEHSNPNDNIEPQRKLV 159 (271)
Q Consensus 80 ~~IR~at~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Va~~~~~~~~~~~~~~iV 159 (271)
+.||+++ .+|++.|.++++..+......++. .|.+.+...+++..+ ....|..+|++.++ |+++
T Consensus 2 ~~ir~~~--~~Dl~~I~~IY~~~v~~~~a~~e~--~~~~~~~~~~~~~~~----~~~g~p~~V~~~~~--------g~v~ 65 (169)
T COG1247 2 MEIRPAT--AADLEAILEIYNGAVENTAATFEE--DPVSLEERAAWFSGR----TRDGYPVVVAEEED--------GKVL 65 (169)
T ss_pred cEEecCh--HHhHHHHHHHHHHhhhcceEEEec--cCCCHHHHHHHHHhc----ccCCceEEEEEcCC--------CeEE
Confidence 5799998 999999999999988765555432 233333333433333 33356788888763 4999
Q ss_pred EEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcEEEEEEEcCCHHHHHHHHhCCC
Q 024161 160 GVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEYLVLRAYEDDYGARRLYSNAGY 239 (271)
Q Consensus 160 G~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y~k~GF 239 (271)
|++.+....+.+. -.......++|+|++||+|+|++|++.+++.+.+.|+..+...+..+|.++++|++++||
T Consensus 66 G~a~~~~fr~r~a-------y~~tve~SiYv~~~~~g~GiG~~Ll~~Li~~~~~~g~~~lva~I~~~n~aSi~lh~~~GF 138 (169)
T COG1247 66 GYASAGPFRERPA-------YRHTVELSIYLDPAARGKGLGKKLLQALITEARALGVRELVAGIESDNLASIALHEKLGF 138 (169)
T ss_pred EEEEeeeccCccc-------cceEEEEEEEECcccccccHHHHHHHHHHHHHHhCCeEEEEEEEcCCCcHhHHHHHHCCC
Confidence 9999986543332 355668899999999999999999999999999999999999999999999999999999
Q ss_pred EEeeccCCccccccCc-cceEEEEEecCC
Q 024161 240 RVVSSDLPWFSTWIGR-KRRVLMIKRSDH 267 (271)
Q Consensus 240 ~~~~~~~~~~~~~~~~-~~~~~m~K~l~~ 267 (271)
+.++..+... .+.+. ...++|++.|+.
T Consensus 139 ~~~G~~~~vg-~k~g~wld~~~~~~~l~~ 166 (169)
T COG1247 139 EEVGTFPEVG-DKFGRWLDLVLMQLLLEE 166 (169)
T ss_pred EEeccccccc-cccceEEeeeeeehhhcc
Confidence 9999987764 22222 123466666643
No 4
>TIGR02382 wecD_rffC TDP-D-fucosamine acetyltransferase. This model represents the WecD protein (Formerly RffC) for the biosynthesis of enterobacterial common antigen (ECA), an outer leaflet, outer membrane glycolipid with a trisaccharide repeat unit. WecD is a member of the GNAT family of acetytransferases (pfam00583).
Probab=99.76 E-value=3.8e-17 Score=135.79 Aligned_cols=142 Identities=17% Similarity=0.119 Sum_probs=100.3
Q ss_pred CeEEEEccCCcccHHHHHHHHHHhccCCccccchhhHHhhHHHHH-HHHHHHHhcCCCCcceEEEEeeCCCCCCCCCCCc
Q 024161 79 GWKVRKLVRVGEEMREVAFIQAEAFHNPVALFNDVFFEFFKAEVL-SGLLYKLRNSPPDRYACLVAEHSNPNDNIEPQRK 157 (271)
Q Consensus 79 ~~~IR~at~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~Va~~~~~~~~~~~~~~ 157 (271)
.+.||+++ ++|++.+.++..+.+..... ...+..+....... ..+...... ......+++.+.++ +
T Consensus 43 ~~~lR~~~--~~D~~~l~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~g---------~ 109 (191)
T TIGR02382 43 DPGARVAT--ETDIPALRQLASAAFALSRF-RAPWYAPDDSGRFYAQWVENAVRG-TFDHQCLILRDASG---------D 109 (191)
T ss_pred CCcceeCC--hhhHHHHHHHHHHHhhcccc-CCCCcCHHHHHHHHHHHHHHHhcC-CCCCeEEEEEccCC---------e
Confidence 46899998 99999999999988643111 11111111111111 222222222 21222233344344 8
Q ss_pred EEEEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcEEEEEEEcCCHHHHHHHHhC
Q 024161 158 LVGVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEYLVLRAYEDDYGARRLYSNA 237 (271)
Q Consensus 158 iVG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y~k~ 237 (271)
+||++.+.... .+..++..++|+|+|||+|+|++|+++++++|.+.|+.+|.+.|...|.+|++||+|+
T Consensus 110 iiG~i~l~~~~-----------~~~~~i~~l~V~p~~rGkG~G~~ll~~~~~~a~~~g~~~I~l~v~~~N~~A~~~Y~kl 178 (191)
T TIGR02382 110 PRGYVTLRELN-----------DTDARIGLLAVFPGAQSRGIGAELMQTALNWCYARGLTRLRVATQMGNTAALRLYIRS 178 (191)
T ss_pred EEEEEEEEecC-----------CCceEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHHHHc
Confidence 99999987421 1234688899999999999999999999999999999999999999999999999999
Q ss_pred CCEEeec
Q 024161 238 GYRVVSS 244 (271)
Q Consensus 238 GF~~~~~ 244 (271)
||+.+++
T Consensus 179 GF~~~~~ 185 (191)
T TIGR02382 179 GANIEST 185 (191)
T ss_pred CCccccc
Confidence 9999887
No 5
>TIGR03827 GNAT_ablB putative beta-lysine N-acetyltransferase. Members of this protein family are GNAT family acetyltransferases, based on a seed alignment in which every member is associated with a lysine 2,3-aminomutase family protein, usually as the adjacent gene. This family includes AblB, the enzyme beta-lysine acetyltransferase that completes the two-step synthesis of the osmolyte (compatible solute) N-epsilon-acetyl-beta-lysine; all members of the family may have this function. Note that N-epsilon-acetyl-beta-lysine has been observed only in methanogenic archaea (e.g. Methanosarcina) but that this model, paired with TIGR03820, suggests a much broader distribution.
Probab=99.75 E-value=4.7e-17 Score=142.10 Aligned_cols=138 Identities=15% Similarity=0.207 Sum_probs=108.7
Q ss_pred cCCCeEEEEccCCcccHHHHHHHHHHhccC-CccccchhhHHhhHHHHHHHHHHHHhcCCCCcceEEEEeeCCCCCCCCC
Q 024161 76 SEYGWKVRKLVRVGEEMREVAFIQAEAFHN-PVALFNDVFFEFFKAEVLSGLLYKLRNSPPDRYACLVAEHSNPNDNIEP 154 (271)
Q Consensus 76 ~~~~~~IR~at~~~~D~~~i~~l~~~~f~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Va~~~~~~~~~~~ 154 (271)
.+.+++||+++ ++|++++.+++.++|.. +.+.. .. +.+...+. +...+++++.++
T Consensus 112 ~~~~~~IR~a~--~~D~~~l~~L~~~v~~~~~~~~~--------~~---~~l~~~~~----~~~~~~v~~~~g------- 167 (266)
T TIGR03827 112 LPEGFTLRIAT--EDDADAMAALYRKVFPTYPFPIH--------DP---AYLLETMK----SNVVYFGVEDGG------- 167 (266)
T ss_pred CCCceEEEECC--HHHHHHHHHHHHHHhccCCCCcc--------CH---HHHHHHhc----CCcEEEEEEECC-------
Confidence 46679999998 99999999999998753 11111 01 12222222 233467777766
Q ss_pred CCcEEEEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcEEEEEEEcCCHHHHHHH
Q 024161 155 QRKLVGVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEYLVLRAYEDDYGARRLY 234 (271)
Q Consensus 155 ~~~iVG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y 234 (271)
++||++.+... .....++|..++|+|+|||+|||++|++.+++++++.|++.+++.+...|.+++++|
T Consensus 168 --~iVG~~~~~~~----------~~~~~~eI~~i~V~P~yRG~GiG~~Ll~~l~~~a~~~g~~~l~~~~~~~n~~a~~ly 235 (266)
T TIGR03827 168 --KIIALASAEMD----------PENGNAEMTDFATLPEYRGKGLAKILLAAMEKEMKEKGIRTAYTIARASSYGMNITF 235 (266)
T ss_pred --EEEEEEEEecC----------CCCCcEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCcEEEeehhhcchhHHHHH
Confidence 99999987531 112457799999999999999999999999999999999999999999999999999
Q ss_pred HhCCCEEeeccCCcc
Q 024161 235 SNAGYRVVSSDLPWF 249 (271)
Q Consensus 235 ~k~GF~~~~~~~~~~ 249 (271)
+|+||+..++.++..
T Consensus 236 ~k~GF~~~G~l~n~~ 250 (266)
T TIGR03827 236 ARLGYAYGGTLVNNT 250 (266)
T ss_pred HHcCCccccEEeecc
Confidence 999999999987765
No 6
>PRK10975 TDP-fucosamine acetyltransferase; Provisional
Probab=99.73 E-value=2.2e-16 Score=131.47 Aligned_cols=143 Identities=19% Similarity=0.192 Sum_probs=101.3
Q ss_pred CeEEEEccCCcccHHHHHHHHHHhccCCccccchhhHHhhHHHHHH-HHHHHHhcCCCCcceEEEEeeCCCCCCCCCCCc
Q 024161 79 GWKVRKLVRVGEEMREVAFIQAEAFHNPVALFNDVFFEFFKAEVLS-GLLYKLRNSPPDRYACLVAEHSNPNDNIEPQRK 157 (271)
Q Consensus 79 ~~~IR~at~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~Va~~~~~~~~~~~~~~ 157 (271)
+..||+++ ++|++.|.++..++|.... ....+..+.......+ .+...... ... ..++|++.++ ++
T Consensus 46 ~~~iR~a~--~~D~~~i~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~v~~~~~--------g~ 112 (194)
T PRK10975 46 TTGARVAT--ETDIPALRQLAAQAFAQSR-FRAPWYAPDDSGRFYAQWIENAVRG-TFD-HQCLLLRDAS--------GQ 112 (194)
T ss_pred CCCcccCC--cccHHHHHHHHHHHhhhcc-ccCccCChhHHHHHHHHHHHHhhcc-ccC-CcEEEEEcCC--------CC
Confidence 46799998 9999999999988775311 1111111111111122 22222221 111 2355665432 38
Q ss_pred EEEEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcEEEEEEEcCCHHHHHHHHhC
Q 024161 158 LVGVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEYLVLRAYEDDYGARRLYSNA 237 (271)
Q Consensus 158 iVG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y~k~ 237 (271)
+||++.+.... ....+|..++|+|+|||+|+|++|++.+++++++.|++++.+.|..+|.+|++||+|+
T Consensus 113 ~vG~~~l~~~~-----------~~~~~i~~~~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~yek~ 181 (194)
T PRK10975 113 IQGFVTLRELN-----------DTDARIGLLAVFPGAQGRGIGARLMQAALNWCQARGLTRLRVATQMGNLAALRLYIRS 181 (194)
T ss_pred EEEEEEEEecC-----------CCceEEEEEEEChhhcCCCHHHHHHHHHHHHHHHcCCCEEEEEeCCCcHHHHHHHHHC
Confidence 99999887421 1235688899999999999999999999999999999999999999999999999999
Q ss_pred CCEEeecc
Q 024161 238 GYRVVSSD 245 (271)
Q Consensus 238 GF~~~~~~ 245 (271)
||+.+++.
T Consensus 182 Gf~~~~~~ 189 (194)
T PRK10975 182 GANIESTA 189 (194)
T ss_pred CCeEeEEE
Confidence 99999883
No 7
>PRK10140 putative acetyltransferase YhhY; Provisional
Probab=99.73 E-value=5.4e-16 Score=124.53 Aligned_cols=143 Identities=16% Similarity=0.162 Sum_probs=101.3
Q ss_pred CeEEEEccCCcccHHHHHHHHHHhccCCccccchhhHHhhHHHHHHHHHHHHhcCCCCcceEEEEeeCCCCCCCCCCCcE
Q 024161 79 GWKVRKLVRVGEEMREVAFIQAEAFHNPVALFNDVFFEFFKAEVLSGLLYKLRNSPPDRYACLVAEHSNPNDNIEPQRKL 158 (271)
Q Consensus 79 ~~~IR~at~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Va~~~~~~~~~~~~~~i 158 (271)
.+.||+++ ++|++.+.++..+.-........ .+.. .+.+...+.. . ....+++++.++ ++
T Consensus 3 ~i~lr~~~--~~D~~~~~~~~~~~~~~~~~~~~---~~~~----~~~~~~~~~~-~-~~~~~~v~~~~~---------~~ 62 (162)
T PRK10140 3 EIVIRHAE--TRDYEAIRQIHAQPEVYHNTLQV---PHPS----DHMWQERLAD-R-PGIKQLVACIDG---------DV 62 (162)
T ss_pred ccEEEecc--hhhHHHHHHHHhCcccccccccC---CCcC----HHHHHHHhhc-C-CCcEEEEEEECC---------EE
Confidence 47899998 99999999998642110000000 0011 1222333332 1 123467777665 89
Q ss_pred EEEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHH-cCCcEEEEEEEcCCHHHHHHHHhC
Q 024161 159 VGVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVL-WGFEYLVLRAYEDDYGARRLYSNA 237 (271)
Q Consensus 159 VG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~-~g~~~i~l~v~~~N~~A~~~Y~k~ 237 (271)
||++.+.....++ .......+++|+|+|||+|||++|++.+++++.+ .|+..+.+.|.+.|.+|++||+|+
T Consensus 63 vG~~~~~~~~~~~--------~~~~~~~~~~v~p~~rg~Gig~~ll~~l~~~~~~~~~~~~i~l~v~~~N~~a~~~y~k~ 134 (162)
T PRK10140 63 VGHLTIDVQQRPR--------RSHVADFGICVDSRWKNRGVASALMREMIEMCDNWLRVDRIELTVFVDNAPAIKVYKKY 134 (162)
T ss_pred EEEEEEecccccc--------cceEEEEEEEECHHHcCCCHHHHHHHHHHHHHHhhCCccEEEEEEEcCCHHHHHHHHHC
Confidence 9999998532111 1111234699999999999999999999999988 699999999999999999999999
Q ss_pred CCEEeeccCCcc
Q 024161 238 GYRVVSSDLPWF 249 (271)
Q Consensus 238 GF~~~~~~~~~~ 249 (271)
||+..+..+.+.
T Consensus 135 GF~~~g~~~~~~ 146 (162)
T PRK10140 135 GFEIEGTGKKYA 146 (162)
T ss_pred CCEEEeecccce
Confidence 999999988776
No 8
>PRK03624 putative acetyltransferase; Provisional
Probab=99.72 E-value=3e-16 Score=122.35 Aligned_cols=128 Identities=23% Similarity=0.221 Sum_probs=96.5
Q ss_pred eEEEEccCCcccHHHHHHHHHHhccCCccccchhhHHhhHHHHHHHHHHHHhcCCCCcceEEEEeeCCCCCCCCCCCcEE
Q 024161 80 WKVRKLVRVGEEMREVAFIQAEAFHNPVALFNDVFFEFFKAEVLSGLLYKLRNSPPDRYACLVAEHSNPNDNIEPQRKLV 159 (271)
Q Consensus 80 ~~IR~at~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Va~~~~~~~~~~~~~~iV 159 (271)
+.||+++ ++|++.+.+++...- . ...+.+ . ...+...... +...++++..++ ++|
T Consensus 3 ~~ir~~~--~~d~~~i~~l~~~~~-~-~~~~~~-------~--~~~~~~~~~~---~~~~~~v~~~~~---------~~v 57 (140)
T PRK03624 3 MEIRVFR--QADFEAVIALWERCD-L-TRPWND-------P--EMDIERKLNH---DPSLFLVAEVGG---------EVV 57 (140)
T ss_pred eEEEEcc--cccHHHHHHHHHhcC-C-Ccchhh-------H--HHHHHHHhcC---CCceEEEEEcCC---------cEE
Confidence 6799998 999999999987751 1 111100 0 1122223322 223467777665 899
Q ss_pred EEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcEEEEEEEcCCHHHHHHHHhCCC
Q 024161 160 GVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEYLVLRAYEDDYGARRLYSNAGY 239 (271)
Q Consensus 160 G~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y~k~GF 239 (271)
|++.+.... ...++..++|+|+|||+|+|+.|+..+++.+++.|++.+.+.+.+.|..+++||+|+||
T Consensus 58 G~~~~~~~~------------~~~~i~~i~v~p~~rg~Gig~~ll~~~~~~~~~~~~~~~~~~~~~~N~~~~~~y~k~GF 125 (140)
T PRK03624 58 GTVMGGYDG------------HRGWAYYLAVHPDFRGRGIGRALVARLEKKLIARGCPKINLQVREDNDAVLGFYEALGY 125 (140)
T ss_pred EEEEeeccC------------CCceEEEEEECHHHhCCCHHHHHHHHHHHHHHHCCCCEEEEEEecCcHHHHHHHHHcCC
Confidence 999876311 22357889999999999999999999999999999999999999999999999999999
Q ss_pred EEeec
Q 024161 240 RVVSS 244 (271)
Q Consensus 240 ~~~~~ 244 (271)
+..+.
T Consensus 126 ~~~~~ 130 (140)
T PRK03624 126 EEQDR 130 (140)
T ss_pred ccccE
Confidence 98765
No 9
>PTZ00330 acetyltransferase; Provisional
Probab=99.72 E-value=5.3e-16 Score=122.77 Aligned_cols=137 Identities=18% Similarity=0.202 Sum_probs=95.5
Q ss_pred CCeEEEEccCCcccHHHHHHHHHHhccCCccccchhhHHhhHHHHHHHHHHHHhcCCCCcceEEEEeeCCCCCCCCCCCc
Q 024161 78 YGWKVRKLVRVGEEMREVAFIQAEAFHNPVALFNDVFFEFFKAEVLSGLLYKLRNSPPDRYACLVAEHSNPNDNIEPQRK 157 (271)
Q Consensus 78 ~~~~IR~at~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Va~~~~~~~~~~~~~~ 157 (271)
..++||+++ ++|++.+.+++......+ ... .... ..+...... ......+++++.++ +
T Consensus 5 ~~~~ir~~~--~~D~~~i~~l~~~~~~~~--~~~-------~~~~-~~~~~~~~~-~~~~~~~~~~~~~~---------~ 62 (147)
T PTZ00330 5 GSLELRDLE--EGDLGSVLELLSHLTSAP--ALS-------QEEL-EQIAARRRL-AGVVTRVFVHSPTQ---------R 62 (147)
T ss_pred ceEEEEEcc--cccHHHHHHHHHHhcCCC--ccc-------hhHH-HHHHHHHhc-CCCceEEEEEeCCC---------E
Confidence 358899998 999999999987754321 111 1111 112222111 11122344555444 8
Q ss_pred EEEEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcEEEEEEEcCCHHHHHHHHhC
Q 024161 158 LVGVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEYLVLRAYEDDYGARRLYSNA 237 (271)
Q Consensus 158 iVG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y~k~ 237 (271)
+||++.+...... ......+++|..++|+|+|||+|||++|++++++++++.|+..+.+. .|.+|++||+|+
T Consensus 63 ~vG~~~~~~~~~~-----~~~~~~~~~i~~~~V~~~~rg~Gig~~l~~~~~~~a~~~~~~~l~l~---~n~~a~~~y~k~ 134 (147)
T PTZ00330 63 IVGTASLFVEPKF-----TRGGKCVGHIEDVVVDPSYRGQGLGRALISDLCEIARSSGCYKVILD---CTEDMVAFYKKL 134 (147)
T ss_pred EEEEEEEEecccc-----ccCCCceEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEe---cChHHHHHHHHC
Confidence 9999998743210 01122357899999999999999999999999999999999888777 488999999999
Q ss_pred CCEEeec
Q 024161 238 GYRVVSS 244 (271)
Q Consensus 238 GF~~~~~ 244 (271)
||+....
T Consensus 135 GF~~~~~ 141 (147)
T PTZ00330 135 GFRACER 141 (147)
T ss_pred CCEEece
Confidence 9998775
No 10
>PRK09491 rimI ribosomal-protein-alanine N-acetyltransferase; Provisional
Probab=99.71 E-value=3.4e-16 Score=124.14 Aligned_cols=129 Identities=16% Similarity=0.194 Sum_probs=97.0
Q ss_pred eEEEEccCCcccHHHHHHHHHHhccCCccccchhhHHhhHHHHHHHHHHHHhcCCCCcceEEEEeeCCCCCCCCCCCcEE
Q 024161 80 WKVRKLVRVGEEMREVAFIQAEAFHNPVALFNDVFFEFFKAEVLSGLLYKLRNSPPDRYACLVAEHSNPNDNIEPQRKLV 159 (271)
Q Consensus 80 ~~IR~at~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Va~~~~~~~~~~~~~~iV 159 (271)
++||+++ .+|++.+.++....+.. ++.. . .+.... . ..+..++++.++ ++|
T Consensus 2 ~~iR~~~--~~D~~~l~~l~~~~~~~--~~~~--------~----~~~~~~-~---~~~~~~~~~~~~---------~~v 52 (146)
T PRK09491 2 NTISSLT--PADLPAAYHIEQRAHAF--PWSE--------K----TFASNQ-G---ERYLNLKLTVNG---------QMA 52 (146)
T ss_pred cchhcCC--hhhhHHHHHHHHhcCCC--CCCH--------H----HHHHHH-h---cCceEEEEEECC---------eEE
Confidence 3689998 99999999987654321 1111 1 111111 1 223234445554 899
Q ss_pred EEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcEEEEEEEcCCHHHHHHHHhCCC
Q 024161 160 GVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEYLVLRAYEDDYGARRLYSNAGY 239 (271)
Q Consensus 160 G~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y~k~GF 239 (271)
|++.+.... +..++..++|+|+|||+|+|+.|++++++.+++.|+..+.+.|...|.+|++||+|+||
T Consensus 53 G~~~~~~~~------------~~~~~~~i~v~~~~rg~G~g~~ll~~~~~~~~~~~~~~~~~~~~~~N~~a~~~y~k~Gf 120 (146)
T PRK09491 53 AFAITQVVL------------DEATLFNIAVDPDYQRQGLGRALLEHLIDELEKRGVATLWLEVRASNAAAIALYESLGF 120 (146)
T ss_pred EEEEEEeec------------CceEEEEEEECHHHccCCHHHHHHHHHHHHHHHCCCcEEEEEEccCCHHHHHHHHHcCC
Confidence 999886421 22357889999999999999999999999999999999999999999999999999999
Q ss_pred EEeeccCCcc
Q 024161 240 RVVSSDLPWF 249 (271)
Q Consensus 240 ~~~~~~~~~~ 249 (271)
+..+..+.|.
T Consensus 121 ~~~~~~~~~~ 130 (146)
T PRK09491 121 NEVTIRRNYY 130 (146)
T ss_pred EEeeeeeccc
Confidence 9998877775
No 11
>PHA00673 acetyltransferase domain containing protein
Probab=99.69 E-value=8.8e-16 Score=121.75 Aligned_cols=136 Identities=19% Similarity=0.049 Sum_probs=99.2
Q ss_pred EccCCcccHHHHHHHHHHhccCCccccchhhHHhhHHHHHHHHHHHHhcCCCCcceEEEEeeCCCCCCCCCCCcEEEEEE
Q 024161 84 KLVRVGEEMREVAFIQAEAFHNPVALFNDVFFEFFKAEVLSGLLYKLRNSPPDRYACLVAEHSNPNDNIEPQRKLVGVVD 163 (271)
Q Consensus 84 ~at~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Va~~~~~~~~~~~~~~iVG~~~ 163 (271)
.|+ .+|+++|++++.+.-..... ++...+ ......+...... +...++|++.++ +|||++.
T Consensus 11 ~A~--~~D~paI~~LLadd~l~~~r--~d~~~~---~~y~~af~ai~~d---p~~~llVa~~~g---------~vVG~~~ 71 (154)
T PHA00673 11 FAE--LADAPTFASLCAEYAHESAN--ADLAGR---APDHHAYAGMEAA---GVAHFLGVFRGE---------ELVGFAC 71 (154)
T ss_pred hcc--HhhHHHHHHHHHhccccccc--cccccc---chhHHHHHHHHhC---CCcEEEEEEECC---------EEEEEEE
Confidence 466 99999999999883222110 011011 1122233334333 344578888776 9999999
Q ss_pred EEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcEEEEEEEcCCHHHHHHHHhCCCEEee
Q 024161 164 VTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEYLVLRAYEDDYGARRLYSNAGYRVVS 243 (271)
Q Consensus 164 l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y~k~GF~~~~ 243 (271)
+...... ...+...++|..++|+|++||+|||++|+++++++|+++||..++++..++ ...+.||.++|++...
T Consensus 72 l~~~p~l-----~~~~~~~~~Ie~l~V~~~~RGqGIG~~Ll~~A~~~Ar~~Gc~~lyis~~p~-~~tv~fy~~~g~~~~~ 145 (154)
T PHA00673 72 LLVTPVP-----HFKGQLIGTTESIFVAAAHRPGGAGMALLRATEALARDLGATGLYVSGPTE-GRLVQLLPAAGYRETN 145 (154)
T ss_pred EEEecCC-----ccCCccEEEEEEEEEChhccCCCHHHHHHHHHHHHHHHCCCCEEEEecCCC-ccchHHHHhCCchhhc
Confidence 9875421 122347788999999999999999999999999999999999999998875 4589999999999876
Q ss_pred c
Q 024161 244 S 244 (271)
Q Consensus 244 ~ 244 (271)
.
T Consensus 146 ~ 146 (154)
T PHA00673 146 R 146 (154)
T ss_pred h
Confidence 6
No 12
>PF13420 Acetyltransf_4: Acetyltransferase (GNAT) domain; PDB: 3DR8_A 3DR6_A 2AE6_B 2JLM_C 2J8R_A 1YVO_B 2J8M_A 2J8N_A 2BL1_A 3IWG_A ....
Probab=99.69 E-value=2e-15 Score=120.56 Aligned_cols=143 Identities=17% Similarity=0.187 Sum_probs=96.8
Q ss_pred EEEccCCcccHHHHHHHHHHhccCCccccchhhHHhhHHHHHHHHHHHHhcCCCCcceEEEEeeCCCCCCCCCCCcEEEE
Q 024161 82 VRKLVRVGEEMREVAFIQAEAFHNPVALFNDVFFEFFKAEVLSGLLYKLRNSPPDRYACLVAEHSNPNDNIEPQRKLVGV 161 (271)
Q Consensus 82 IR~at~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Va~~~~~~~~~~~~~~iVG~ 161 (271)
||+++ ++|++.|..++.+........... .....+.....+...... +....++|.+.++ ++||+
T Consensus 1 IR~~~--~~D~~~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~--~~~~~~~v~~~~g---------~iiG~ 65 (155)
T PF13420_consen 1 IRPAT--EEDLEEILKLYNEPRHEYFFTFEY--PEDSEESFERWIESIIDS--SKQRLFLVAEEDG---------KIIGY 65 (155)
T ss_dssp EEE----GGGHHHHHHHHHHHHHHTSSSSCS--SHS-HHHHHHHHHHHHHH--HTTEEEEEEECTT---------EEEEE
T ss_pred CCCCc--HHHHHHHHHHHhhhhhcceeEecC--CCCCHHHHHHHHHHhccc--CCCcEEEEEEcCC---------cEEEE
Confidence 79998 999999999998643221111110 001112222222222211 1233344555354 99999
Q ss_pred EEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHH-HHcCCcEEEEEEEcCCHHHHHHHHhCCCE
Q 024161 162 VDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLA-VLWGFEYLVLRAYEDDYGARRLYSNAGYR 240 (271)
Q Consensus 162 ~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a-~~~g~~~i~l~v~~~N~~A~~~Y~k~GF~ 240 (271)
+.+..... ....+ ...++|.|++|++|+|+.|++.++++| ++.|++++.+.|.+.|+.|++||+++||+
T Consensus 66 ~~~~~~~~---------~~~~~-~~~~~v~~~~~~~gig~~l~~~l~~~af~~~~~~~i~~~v~~~N~~~i~~~~~~GF~ 135 (155)
T PF13420_consen 66 VSLRDIDP---------YNHTA-ELSIYVSPDYRGKGIGRKLLDELIEYAFKELGIHKIYLEVFSSNEKAINFYKKLGFE 135 (155)
T ss_dssp EEEEESSS---------GTTEE-EEEEEEEGGGTTSSHHHHHHHHHHHHH-HHTT-CEEEEEEETT-HHHHHHHHHTTEE
T ss_pred EEEEeeec---------cCCEE-EEeeEEChhHCCCcHHHHHHHHHHHHhhhccCeEEEEEEEecCCHHHHHHHHhCCCE
Confidence 99985321 12333 445888899999999999999999999 89999999999999999999999999999
Q ss_pred EeeccCCcc
Q 024161 241 VVSSDLPWF 249 (271)
Q Consensus 241 ~~~~~~~~~ 249 (271)
.+++.+.+.
T Consensus 136 ~~g~~~~~~ 144 (155)
T PF13420_consen 136 EEGELKDHI 144 (155)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEecEE
Confidence 999987766
No 13
>TIGR02406 ectoine_EctA L-2,4-diaminobutyric acid acetyltransferase. This enzyme family is the EctA of ectoine biosynthesis. Ectoine is a compatible solute, analagous to trehalose, betaines, etc., found often in halotolerant organisms. EctA is L-2,4-diaminobutyric acid acetyltransferase, also called DABA acetyltransferase.
Probab=99.68 E-value=7.7e-16 Score=124.01 Aligned_cols=128 Identities=18% Similarity=0.123 Sum_probs=94.0
Q ss_pred EEEccCCcccHHHHHHHHHHhccCCccccchhhHHhhHHHHHHHHHHHHhcCCCCcceEEEEeeCCCCCCCCCCCcEEEE
Q 024161 82 VRKLVRVGEEMREVAFIQAEAFHNPVALFNDVFFEFFKAEVLSGLLYKLRNSPPDRYACLVAEHSNPNDNIEPQRKLVGV 161 (271)
Q Consensus 82 IR~at~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Va~~~~~~~~~~~~~~iVG~ 161 (271)
||+++ .+|+++|.++..+....+. ... +. .. ..... . ...+++++.++ +++||+
T Consensus 1 IR~~~--~~D~~~i~~L~~~~~~~~~---~~~-~~--------~~-~~~~~-~--~~~~~v~~~~~--------~~ivG~ 54 (157)
T TIGR02406 1 FRPPR--IEDGAGIWELVKDCPPLDL---NSS-YA--------YL-LLCTD-F--ADTSIVAESEG--------GEIVGF 54 (157)
T ss_pred CCCCc--cccHHHHHHHHHhCCCCCc---ccc-ee--------hh-hhhhh-c--CCcEEEEEcCC--------CeEEEE
Confidence 57887 9999999999988643211 110 00 00 01111 1 12356776432 389999
Q ss_pred EEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcEEEEEEEcCCHHHHHHHHhCCCEE
Q 024161 162 VDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEYLVLRAYEDDYGARRLYSNAGYRV 241 (271)
Q Consensus 162 ~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y~k~GF~~ 241 (271)
+.+... ....+..++..++|+|+|||+|||++|++.+++++++.++..+.+.|.+.|.+|++||+|+||+.
T Consensus 55 ~~~~~~---------~~~~~~~~i~~l~V~p~~rg~GiG~~L~~~l~~~a~~~~~~~i~~~v~~~N~~a~~ly~k~G~~~ 125 (157)
T TIGR02406 55 VSGYLR---------PDRPDVLFVWQVAVDPRARGKGLARRLLEALLERVACERVRHLETTITPDNQASRALFKALARRR 125 (157)
T ss_pred EEEEec---------CCCCCeEEEEEEEEChHhccCcHHHHHHHHHHHHHHhCCCCEEEEEEcCCCHHHHHHHHHhCccc
Confidence 876532 11235678999999999999999999999999999999999999999999999999999999987
Q ss_pred eec
Q 024161 242 VSS 244 (271)
Q Consensus 242 ~~~ 244 (271)
...
T Consensus 126 ~~~ 128 (157)
T TIGR02406 126 GVH 128 (157)
T ss_pred CCC
Confidence 444
No 14
>PF13673 Acetyltransf_10: Acetyltransferase (GNAT) domain; PDB: 2FIW_A 1BOB_A 3FNC_B 3EXN_A.
Probab=99.68 E-value=8.5e-16 Score=116.77 Aligned_cols=117 Identities=24% Similarity=0.261 Sum_probs=83.5
Q ss_pred cHHHHHHHHHHhccCCccccchhhHHhhHHHHHHHHHHHHhcCCCCcceEEEEeeCCCCCCCCCCCcEEEEEEEEeecCC
Q 024161 91 EMREVAFIQAEAFHNPVALFNDVFFEFFKAEVLSGLLYKLRNSPPDRYACLVAEHSNPNDNIEPQRKLVGVVDVTVLRDD 170 (271)
Q Consensus 91 D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Va~~~~~~~~~~~~~~iVG~~~l~~~~~~ 170 (271)
|+++|.++..+++........+...+.. ....+.+...+.. +...++|++.++ +|||++.+..
T Consensus 1 D~~~i~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~v~~~~~---------~ivG~~~~~~---- 63 (117)
T PF13673_consen 1 DIPAIAELYREAWQENYWDYGPEQIDAW-RYSPEDLEEYLEE---GSHTIFVAEEGG---------EIVGFAWLEP---- 63 (117)
T ss_dssp GHHHHHHHHHHHHHHHTTTTSHHHHHHH-HSSHHHHHHHHCT---CCCEEEEEEETT---------EEEEEEEEET----
T ss_pred CHHHHHHHHHHHHHHhccCCCHHHHHHH-hcCHHHHHHHHHh---cCCEEEEEEECC---------EEEEEEEEcC----
Confidence 8899999999988652211111100000 1123455555543 235689999887 9999999861
Q ss_pred cccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcEEEEEEEcCCHHHHHHHHhCCC
Q 024161 171 PVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEYLVLRAYEDDYGARRLYSNAGY 239 (271)
Q Consensus 171 ~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y~k~GF 239 (271)
...|..++|+|+|||+|||++|++++++++++ |++.+.+. .|..|++||+++||
T Consensus 64 -----------~~~i~~l~v~p~~r~~Gig~~Ll~~~~~~~~~-~~~~l~~~---~~~~a~~~y~~~GF 117 (117)
T PF13673_consen 64 -----------DGEISHLYVLPEYRGRGIGRALLDAAEKEAKD-GIRRLTVE---ANERARRFYRKLGF 117 (117)
T ss_dssp -----------CEEEEEEEE-GGGTTSSHHHHHHHHHHHHHTT-TCEEEEEE---C-HHHHHHHHHTT-
T ss_pred -----------CCeEEEEEEChhhcCCcHHHHHHHHHHHHHHc-CCcEEEEE---eCHHHHHHHHhCCC
Confidence 11288999999999999999999999999977 99988888 88999999999998
No 15
>PF00583 Acetyltransf_1: Acetyltransferase (GNAT) family; InterPro: IPR000182 The N-acetyltransferases (NAT) (EC 2.3.1.-) are enzymes that use acetyl coenzyme A (CoA) to transfer an acetyl group to a substrate, a reaction implicated in various functions from bacterial antibiotic resistance to mammalian circadian rhythm and chromatin remodeling. The Gcn5-related N-acetyltransferases (GNAT) catalyze the transfer of the acetyl from the CoA donor to a primary amine of the acceptor. The GNAT proteins share a domain composed of four conserved sequence motifs A-D [, ]. This GNAT domain is named after yeast GCN5 (from General Control Nonrepressed) and related histone acetyltransferases (HATs) like Hat1 and PCAF. HATs acetylate lysine residues of amino terminal histone tails, resulting in transcription activation. Another category of GNAT, the aminoglycoside N-acetyltransferases, confer antibiotic resistance by catalyzing the acetylation of amino groups in aminoglycoside antibiotics []. GNAT proteins can also have anabolic and catabolic functions in both prokaryotes and eukaryotes [, , , , ]. The acetyltransferase/GNAT domain forms a structurally conserved fold of 6 to 7 beta strands (B) and 4 helices (H) in the topology B1-H1-H2-B2-B3-B4-H3-B5-H4-B6, followed by a C-terminal strand which may be from the same monomer or contributed by another [, ]. Motifs D (B2-B3), A (B4-H3) and B (B5-H4) are collectively called the HAT core [, , ], while the N-terminal motif C (B1-H1) is less conserved. Some proteins known to contain a GNAT domain: Yeast GCN5 and Hat1, which are histone acetyltransferases (EC 2.3.1.48). Human PCAF, a histone acetyltransferase. Mammalian serotonin N-acetyltransferase (SNAT) or arylalkylamine NAT (AANAT), which acetylates serotonin into a circadian neurohormone that may participate in light-dark rhythms, and human mood and behavior. Mammalian glucosamine 6-phosphate N-acetyltransferase (GNA1) (EC 2.3.1.4). Escherichia coli rimI and rimJ, which acetylate the N-terminal alanine of ribosomal proteins S18 and S5, respectively (EC 2.3.1.128). Mycobacterium tuberculosis aminoglycoside 2'-N-acetyltransferase (aac), which acetylates the 2' hydroxyl or amino group of a broad spectrum of aminoglycoside antibiotics. Bacillus subtilis bltD and paiA, which acetylate spermine and spermidine. This entry represents the entire GNAT domain.; GO: 0008080 N-acetyltransferase activity, 0008152 metabolic process; PDB: 3T9Y_A 2R7H_B 2OZH_A 1Y9W_B 1VKC_B 2OH1_C 3R9E_B 3R9G_B 3R9F_A 3R96_A ....
Probab=99.67 E-value=9.8e-16 Score=109.30 Aligned_cols=79 Identities=28% Similarity=0.416 Sum_probs=71.5
Q ss_pred CcEEEEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcEEEEEEEcCCHHHHHHHH
Q 024161 156 RKLVGVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEYLVLRAYEDDYGARRLYS 235 (271)
Q Consensus 156 ~~iVG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y~ 235 (271)
++|||++.+....... ...+.++|..++|+|+|||+|||+.|++++++++++.|++.+.+.+.+.|..+++||+
T Consensus 5 ~~ivg~~~~~~~~~~~------~~~~~~~i~~~~v~~~~r~~Gig~~L~~~~~~~~~~~g~~~i~~~~~~~n~~~~~~~~ 78 (83)
T PF00583_consen 5 GQIVGFASLRPPPEPF------DHGNHAYIHRLAVDPEYRGQGIGSKLLQAAEEWARKRGIKRIYLDVSPDNPAARRFYE 78 (83)
T ss_dssp TEEEEEEEEEEEETTT------TTTTEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTESEEEEEEETTGHHHHHHHH
T ss_pred CEEEEEEEEEECCCcc------ccCCEEEEEEEEEcHHHhhCCCchhhhhhhhhhHHhcCccEEEEEEeCCCHHHHHHHH
Confidence 3999999999754332 1157899999999999999999999999999999999999999999999999999999
Q ss_pred hCCCE
Q 024161 236 NAGYR 240 (271)
Q Consensus 236 k~GF~ 240 (271)
|+||+
T Consensus 79 k~Gf~ 83 (83)
T PF00583_consen 79 KLGFE 83 (83)
T ss_dssp HTTEE
T ss_pred HcCCC
Confidence 99996
No 16
>TIGR03103 trio_acet_GNAT GNAT-family acetyltransferase TIGR03103. Members of this protein family belong to the GNAT family of acetyltransferases. Each is part of a conserved three-gene cassette sparsely distributed across at least twenty different species known so far, including alpha, beta, and gamma Proteobacteria, Mycobacterium, and Prosthecochloris, which is a member of the Chlorobi. The other two members of the cassette are a probable protease and an asparagine synthetase family protein.
Probab=99.67 E-value=2.4e-15 Score=143.35 Aligned_cols=139 Identities=22% Similarity=0.229 Sum_probs=102.6
Q ss_pred cCCCeEEEEccCCcccHHHHHHHHHHhccCCccccchhhHHhhHHHHHHHHHHHHhcCCCCcceEEEEeeCCCCCCCCCC
Q 024161 76 SEYGWKVRKLVRVGEEMREVAFIQAEAFHNPVALFNDVFFEFFKAEVLSGLLYKLRNSPPDRYACLVAEHSNPNDNIEPQ 155 (271)
Q Consensus 76 ~~~~~~IR~at~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Va~~~~~~~~~~~~ 155 (271)
.+.+++||+++ .++|++.|.+++.+....+ .. .. .+...+.. ....+||++.+. +
T Consensus 79 ~~~g~~IR~~~-~~~D~~~I~~L~~~~~~~p--~~--------~~----~~~~~~~~---~~~~~~vA~~~~-------~ 133 (547)
T TIGR03103 79 TPRGFTVRRLR-GPADVDAINRLYAARGMVP--VR--------VD----FVLDHRHS---RAITYLVAEDEA-------S 133 (547)
T ss_pred CCCCcEEEeCC-ChhHHHHHHHHHHhcCCCC--CC--------HH----HHHHHhcC---CCceEEEEEECC-------C
Confidence 56789999984 3899999999998754221 11 01 11112211 234578887642 2
Q ss_pred CcEEEEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcEEEEEEEcCCHHHHHHHH
Q 024161 156 RKLVGVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEYLVLRAYEDDYGARRLYS 235 (271)
Q Consensus 156 ~~iVG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y~ 235 (271)
++|||++....... . ........+++.++|+|+|||+|||++|++++++++++.|+.++.+.|..+|..|++||+
T Consensus 134 g~IVG~~~~~~~~~-~----~~d~~~~~~i~~l~V~P~~Rg~GIG~~Ll~~l~e~a~~~G~~~i~L~V~~~N~~Ai~fY~ 208 (547)
T TIGR03103 134 GAIIGTVMGVDHRK-A----FNDPEHGSSLWCLAVDPQAAHPGVGEALVRALAEHFQSRGCAYMDLSVMHDNEQAIALYE 208 (547)
T ss_pred CeEEEEEEEEeccc-c----ccCCCCCeEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEEcCCCHHHHHHHH
Confidence 49999997542110 0 111223457999999999999999999999999999999999999999999999999999
Q ss_pred hCCCEEeec
Q 024161 236 NAGYRVVSS 244 (271)
Q Consensus 236 k~GF~~~~~ 244 (271)
|+||+.+..
T Consensus 209 klGf~~~~~ 217 (547)
T TIGR03103 209 KLGFRRIPV 217 (547)
T ss_pred HCCCEEeeE
Confidence 999998766
No 17
>KOG3139 consensus N-acetyltransferase [General function prediction only]
Probab=99.66 E-value=3.2e-15 Score=117.14 Aligned_cols=95 Identities=23% Similarity=0.327 Sum_probs=81.6
Q ss_pred eEEEEeeCCCCCCCCCCCcEEEEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcE
Q 024161 139 ACLVAEHSNPNDNIEPQRKLVGVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEY 218 (271)
Q Consensus 139 ~~~Va~~~~~~~~~~~~~~iVG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~ 218 (271)
.|+++.+++ +..||++.+.... +......||..++|+++|||+|||++|++.+++.++.+|+..
T Consensus 57 ~~~~a~d~~--------~~~VGai~ck~~~--------~r~~~rgyi~mLaV~~e~Rg~GIg~aLvr~aId~m~~~g~~e 120 (165)
T KOG3139|consen 57 FCFLALDEK--------GDTVGAIVCKLDT--------HRNTLRGYIAMLAVDSEYRGQGIGKALVRKAIDAMRSRGYSE 120 (165)
T ss_pred EEEEEEcCC--------CceEEEEEEeccc--------cCCcceEEEEEEEechhhccccHHHHHHHHHHHHHHHCCCcE
Confidence 366666654 2269999888532 222356889999999999999999999999999999999999
Q ss_pred EEEEEEcCCHHHHHHHHhCCCEEeeccCCcc
Q 024161 219 LVLRAYEDDYGARRLYSNAGYRVVSSDLPWF 249 (271)
Q Consensus 219 i~l~v~~~N~~A~~~Y~k~GF~~~~~~~~~~ 249 (271)
+.|++...|.+|.+||+++||...++...|+
T Consensus 121 VvLeTe~~n~~A~~LY~sLGF~r~~r~~~YY 151 (165)
T KOG3139|consen 121 VVLETEVTNLSALRLYESLGFKRDKRLFRYY 151 (165)
T ss_pred EEEeccccchHHHHHHHhcCceEecceeEEE
Confidence 9999999999999999999999999988877
No 18
>PLN02706 glucosamine 6-phosphate N-acetyltransferase
Probab=99.66 E-value=9.1e-15 Score=116.36 Aligned_cols=139 Identities=17% Similarity=0.121 Sum_probs=96.2
Q ss_pred CCeEEEEccCCcccHH-HHHHHHHHhccCCccccchhhHHhhHHHHHHHHHHHHhcCCCCcceEEEEeeCCCCCCCCCCC
Q 024161 78 YGWKVRKLVRVGEEMR-EVAFIQAEAFHNPVALFNDVFFEFFKAEVLSGLLYKLRNSPPDRYACLVAEHSNPNDNIEPQR 156 (271)
Q Consensus 78 ~~~~IR~at~~~~D~~-~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Va~~~~~~~~~~~~~ 156 (271)
..++||+++ .+|++ .+.+++...... .++ ........+...... ......++++..+ ++
T Consensus 5 ~~~~ir~~~--~~D~~~~~~~~~~~~~~~-~~~--------~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-------~~ 64 (150)
T PLN02706 5 EKFKVRRLE--ISDKSKGFLELLQQLTVV-GDV--------TEEEFEARFQELASL--GDDHLICVIEDAA-------SG 64 (150)
T ss_pred CceEEeEhh--hcccchHHHHHHHhccCC-CCC--------CHHHHHHHHHHHHhC--CCcEEEEEEEeCC-------CC
Confidence 457899998 99998 488877654221 111 112222332222221 1233356666521 14
Q ss_pred cEEEEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcEEEEEEEcCCHHHHHHHHh
Q 024161 157 KLVGVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEYLVLRAYEDDYGARRLYSN 236 (271)
Q Consensus 157 ~iVG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y~k 236 (271)
+|||++.+...... ........+|..++|+|+|||+|||++|++.++++|++.|++++.+.+.+.|. +||+|
T Consensus 65 ~ivG~~~~~~~~~~-----~~~~~~~~~i~~i~V~~~~rg~GiG~~ll~~~~~~a~~~g~~~i~l~~~~~N~---~~y~k 136 (150)
T PLN02706 65 RIIATGSVFVERKF-----IRNCGKVGHIEDVVVDSAARGKGLGKKIIEALTEHARSAGCYKVILDCSEENK---AFYEK 136 (150)
T ss_pred cEEEEEEEEEEeec-----ccCCCcEEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEeccccH---HHHHH
Confidence 89999988632210 12224567789999999999999999999999999999999999999999985 69999
Q ss_pred CCCEEeec
Q 024161 237 AGYRVVSS 244 (271)
Q Consensus 237 ~GF~~~~~ 244 (271)
+||+..+.
T Consensus 137 ~GF~~~g~ 144 (150)
T PLN02706 137 CGYVRKEI 144 (150)
T ss_pred CcCEEehh
Confidence 99998775
No 19
>PF13523 Acetyltransf_8: Acetyltransferase (GNAT) domain; PDB: 2VQY_A 2BUE_A 1V0C_A 1YK3_D 2PR8_A 2QIR_A 2PRB_A 2QML_A 2PC1_A.
Probab=99.65 E-value=7.2e-15 Score=117.27 Aligned_cols=141 Identities=20% Similarity=0.222 Sum_probs=97.0
Q ss_pred EEEccCCcccHHHHHHHHHHhccCCccccchhhHHhhHHHHHHHHHHHHhcCCCCcceEEEEeeCCCCCCCCCCCcEEEE
Q 024161 82 VRKLVRVGEEMREVAFIQAEAFHNPVALFNDVFFEFFKAEVLSGLLYKLRNSPPDRYACLVAEHSNPNDNIEPQRKLVGV 161 (271)
Q Consensus 82 IR~at~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Va~~~~~~~~~~~~~~iVG~ 161 (271)
||+++ ..+|++.|.+++.+.... .++..-.. . +..+.+...+.. . +...++|++.++ +++|+
T Consensus 1 ~R~a~-~~~Dl~~i~~w~~~~~~~--~~~~~~~~---~-~~~~~~~~~l~~-~-~~~~~~v~~~dg---------~~~g~ 62 (152)
T PF13523_consen 1 LRPAT-TPDDLPLILQWLNQPHVR--EFWDQDPS---Q-EWVEEYPEQLEA-D-PGHHPYVAEDDG---------EPIGY 62 (152)
T ss_dssp EEE----GGGHHHHHHHHTSHHHH--CCH-CCCT---H-HHHHHHHHHHCH-T-TTEEEEEEEETT---------EEEEE
T ss_pred CeeCc-cHHHHHHHHHHHHhHHHH--HHccCCCC---H-HHHHHHHhhhcc-c-CCceEEEEEECC---------EEEEE
Confidence 67885 489999999998765321 11110000 1 122333334431 1 345688888887 99999
Q ss_pred EEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHc-CCcEEEEEEEcCCHHHHHHHHhCCCE
Q 024161 162 VDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLW-GFEYLVLRAYEDDYGARRLYSNAGYR 240 (271)
Q Consensus 162 ~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~-g~~~i~l~v~~~N~~A~~~Y~k~GF~ 240 (271)
+.+....... ......+.++.++|+|++||+|+|+.++..+++.+.+. +++++.+++.+.|.+++++|+|+||+
T Consensus 63 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~rg~G~g~~~~~~~~~~~~~~~~~~~i~~~~~~~N~~~~~~~~k~GF~ 137 (152)
T PF13523_consen 63 FEIYWPDEDY-----DADDGDRGIHRLIVDPEYRGQGLGKAMLRALIEFLFEDPGVDRIVLDPHEDNTRAIRLYEKAGFR 137 (152)
T ss_dssp EEEEEGGGSS--------TTEEEEEEEESTGGGTTSSHHHHHHHHHHHHHHTSTT--EEEEEEBTT-HHHHHHHHHTT-E
T ss_pred EEEecccccc-----cCCCCEEEEeeeeechhhcCCCHHHHHHHHHHHHHHhCCCCCEEEEecCcCCHHHHHHHHHcCCE
Confidence 9886422211 11346677889999999999999999999999999976 89999999999999999999999999
Q ss_pred Eeecc
Q 024161 241 VVSSD 245 (271)
Q Consensus 241 ~~~~~ 245 (271)
.+++.
T Consensus 138 ~~g~~ 142 (152)
T PF13523_consen 138 KVGEF 142 (152)
T ss_dssp EEEEE
T ss_pred EeeEE
Confidence 99994
No 20
>TIGR01575 rimI ribosomal-protein-alanine acetyltransferase. Members of this model belong to the GCN5-related N-acetyltransferase (GNAT) superfamily. This model covers prokarotes and the archaea. The seed contains a characterized accession for Gram negative E. coli. An untraceable characterized accession (PIR|S66013) for Gram positive B. subtilis scores well (205.0) in the full alignment. Characterized members are lacking in the archaea. Noise cutoff (72.4) was set to exclude M. loti paralog of rimI. Trusted cutoff (80.0) was set at next highest scoring member in the mini-database.
Probab=99.65 E-value=6.4e-15 Score=113.63 Aligned_cols=121 Identities=23% Similarity=0.314 Sum_probs=93.4
Q ss_pred cHHHHHHHHHHhccCCccccchhhHHhhHHHHHHHHHHHHhcCCCCcceEEEEeeCCCCCCCCCCCcEEEEEEEEeecCC
Q 024161 91 EMREVAFIQAEAFHNPVALFNDVFFEFFKAEVLSGLLYKLRNSPPDRYACLVAEHSNPNDNIEPQRKLVGVVDVTVLRDD 170 (271)
Q Consensus 91 D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Va~~~~~~~~~~~~~~iVG~~~l~~~~~~ 170 (271)
|++++.++..++|..+ +. .+.+...+.. ....++++..++ ++||++.+....
T Consensus 1 d~~~i~~~~~~~~~~~--~~------------~~~~~~~~~~---~~~~~~~~~~~~---------~~vg~~~~~~~~-- 52 (131)
T TIGR01575 1 DLKAVLEIEAAAFAFP--WT------------EAQFAEELAN---YHLCYLLARIGG---------KVVGYAGVQIVL-- 52 (131)
T ss_pred CHHHHHHHHHhhCCCC--CC------------HHHHHHHhcC---CCceEEEEecCC---------eEEEEEEEEecC--
Confidence 6788888888887642 11 1122223322 223345555555 899999976421
Q ss_pred cccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcEEEEEEEcCCHHHHHHHHhCCCEEeeccCCcc
Q 024161 171 PVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEYLVLRAYEDDYGARRLYSNAGYRVVSSDLPWF 249 (271)
Q Consensus 171 ~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y~k~GF~~~~~~~~~~ 249 (271)
...++..++|+|+|||+|+|++|++++++++.+.|++.+.+.+.+.|..+++||+|+||+.++..+.|.
T Consensus 53 ----------~~~~i~~~~v~~~~rg~G~g~~ll~~~~~~~~~~~~~~i~~~~~~~n~~~~~~y~~~Gf~~~~~~~~~~ 121 (131)
T TIGR01575 53 ----------DEAHILNIAVKPEYQGQGIGRALLRELIDEAKGRGVNEIFLEVRVSNIAAQALYKKLGFNEIAIRRNYY 121 (131)
T ss_pred ----------CCeEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCeEEEEEecccHHHHHHHHHcCCCccccccccc
Confidence 234589999999999999999999999999999999999999999999999999999999999987765
No 21
>COG0456 RimI Acetyltransferases [General function prediction only]
Probab=99.63 E-value=1.1e-14 Score=118.69 Aligned_cols=146 Identities=23% Similarity=0.274 Sum_probs=104.3
Q ss_pred CCCeEEEEccCCcccHH--HHHHHHHHhccCCccccchhhHHhhHHHHHHHHHHHHhcCCCCcceEEEEeeC--CCCCCC
Q 024161 77 EYGWKVRKLVRVGEEMR--EVAFIQAEAFHNPVALFNDVFFEFFKAEVLSGLLYKLRNSPPDRYACLVAEHS--NPNDNI 152 (271)
Q Consensus 77 ~~~~~IR~at~~~~D~~--~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Va~~~--~~~~~~ 152 (271)
.....+|.++ ..|+. .+..+....|... ..+ ....+...+.. ....++++..+ ++..
T Consensus 9 ~~~~~ir~~~--~~d~~~~~~~~~~~~~~~~~-~~~-----------~~~~~~~~l~~---~~~~~~v~~~~~~~~~~-- 69 (177)
T COG0456 9 EDKVTIREAI--NKDLLDVALAALEARTFDIR-LPW-----------SREYFEKDLTQ---APELLLVAETGGLDGLL-- 69 (177)
T ss_pred ccceehhhhh--hcccchHHHHHHhhhcCCCC-Ccc-----------hHHHHHHHHhh---CcceeEEEEecccCCCc--
Confidence 3456789997 99999 7888877776532 111 11222223322 12235666653 1000
Q ss_pred CCCCcEEEEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCC-cEEEEEEEcCCHHHH
Q 024161 153 EPQRKLVGVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGF-EYLVLRAYEDDYGAR 231 (271)
Q Consensus 153 ~~~~~iVG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~-~~i~l~v~~~N~~A~ 231 (271)
.++++|++........+.. ....+|..++|+|+|||+|||++|+..+++.+.+.+. ..+.|.|..+|.+|+
T Consensus 70 --~~~~~G~~~~~~~~~~~~~------~~~~~i~~iaV~p~~r~~Gig~~Ll~~~~~~~~~~~~~~~~~L~V~~~N~~Ai 141 (177)
T COG0456 70 --DGKVVGFLLVRVVDGRPSA------DHEGHIYNLAVDPEYRGRGIGRALLDEALERLRERGLADKIVLEVRESNEAAI 141 (177)
T ss_pred --ccceeEEEEEEEecCCccc------cCccEEEEEEEChHhhcCCHHHHHHHHHHHHHHhcCCCceEEEEEecCChHHH
Confidence 0149999998632211100 2356799999999999999999999999999999997 899999999999999
Q ss_pred HHHHhCCCEEeeccCCcc
Q 024161 232 RLYSNAGYRVVSSDLPWF 249 (271)
Q Consensus 232 ~~Y~k~GF~~~~~~~~~~ 249 (271)
+||+|+||+.....+.|+
T Consensus 142 ~lY~~~GF~~~~~~~~yy 159 (177)
T COG0456 142 GLYRKLGFEVVKIRKNYY 159 (177)
T ss_pred HHHHHcCCEEEeeehhhc
Confidence 999999999999998887
No 22
>PRK10809 ribosomal-protein-S5-alanine N-acetyltransferase; Provisional
Probab=99.63 E-value=5.6e-14 Score=116.78 Aligned_cols=153 Identities=10% Similarity=0.084 Sum_probs=101.0
Q ss_pred cCCCeEEEEccCCcccHHHHHHHHHH--hccCCccccchh--hHHhhHHHHHHHHHHHHhcCCCCcceEEEEeeCCCCCC
Q 024161 76 SEYGWKVRKLVRVGEEMREVAFIQAE--AFHNPVALFNDV--FFEFFKAEVLSGLLYKLRNSPPDRYACLVAEHSNPNDN 151 (271)
Q Consensus 76 ~~~~~~IR~at~~~~D~~~i~~l~~~--~f~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~Va~~~~~~~~ 151 (271)
....+.||+++ ++|++.+.+++.+ .+..+.....+. ..+.........+...... +....|+.....
T Consensus 14 ~t~rl~LR~~~--~~Da~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~~---- 84 (194)
T PRK10809 14 TTDRLVVRLVH--ERDAWRLADYYAENRHFLKPWEPVRDESHCYPSGWQARLGMINEFHKQ---GSAFYFALLDPD---- 84 (194)
T ss_pred ccCcEEEEeCC--HHHHHHHHHHHHhCHHhccCCCCCCcccccCHHHHHHHHHHHHHHHhc---CcEEEEEEEECC----
Confidence 34568999998 9999999998875 222111110000 0010111111222222221 222234443322
Q ss_pred CCCCCcEEEEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHH-cCCcEEEEEEEcCCHHH
Q 024161 152 IEPQRKLVGVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVL-WGFEYLVLRAYEDDYGA 230 (271)
Q Consensus 152 ~~~~~~iVG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~-~g~~~i~l~v~~~N~~A 230 (271)
++++||++.+..... ........+++|.|+|||+|+|+++++.+++++.+ .|+++|.+.|.+.|.+|
T Consensus 85 ---~~~~iG~i~l~~~~~---------~~~~~~eig~~i~~~~~G~G~~~ea~~~ll~~~~~~l~l~~i~~~v~~~N~~S 152 (194)
T PRK10809 85 ---EKEIIGVANFSNVVR---------GSFHACYLGYSLGQKWQGQGLMFEALQAAIRYMQRQQHMHRIMANYMPHNKRS 152 (194)
T ss_pred ---CCeEEEEEEEEeecC---------CCeeeEEEEEEECHHHcCCCHHHHHHHHHHHHHHhcCCceEEEEEeeCCCHHH
Confidence 248999999874221 01112246789999999999999999999999987 69999999999999999
Q ss_pred HHHHHhCCCEEeeccCCcc
Q 024161 231 RRLYSNAGYRVVSSDLPWF 249 (271)
Q Consensus 231 ~~~Y~k~GF~~~~~~~~~~ 249 (271)
+++|+|+||+.++..+.+.
T Consensus 153 ~~l~ek~Gf~~~g~~~~~~ 171 (194)
T PRK10809 153 GDLLARLGFEKEGYAKDYL 171 (194)
T ss_pred HHHHHHCCCcEEeeecccc
Confidence 9999999999999877665
No 23
>PRK10151 ribosomal-protein-L7/L12-serine acetyltransferase; Provisional
Probab=99.63 E-value=2.3e-14 Score=117.47 Aligned_cols=165 Identities=8% Similarity=0.060 Sum_probs=107.6
Q ss_pred CCCeEEEEccCCcccHHHHHHHHHH--hccCCccccchhhHHhhHHHHHHHHHHHHhcCCCCcceEEEEeeCCCCCCCCC
Q 024161 77 EYGWKVRKLVRVGEEMREVAFIQAE--AFHNPVALFNDVFFEFFKAEVLSGLLYKLRNSPPDRYACLVAEHSNPNDNIEP 154 (271)
Q Consensus 77 ~~~~~IR~at~~~~D~~~i~~l~~~--~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Va~~~~~~~~~~~ 154 (271)
...+.+|+++ ++|++.+..++.+ .+......+.. .+.+.++..+.+..............++++.++
T Consensus 8 t~rl~Lr~~~--~~D~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~------- 76 (179)
T PRK10151 8 SESLELHAVD--ESHVTPLHQLVCKNKTWLQQSLNWPQ--FVQSEEDTRKTVQGNVMLHQRGYAKMFMIFKED------- 76 (179)
T ss_pred CCcEEEEeCC--HHHHHHHHHHHHHhHHHHHhcCCCcC--ccCCHHHHHHHHHHHHHHHhcCCcEEEEEEECC-------
Confidence 3458899998 9999999998742 21111000100 111233334444333221111121245555554
Q ss_pred CCcEEEEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHH-cCCcEEEEEEEcCCHHHHHH
Q 024161 155 QRKLVGVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVL-WGFEYLVLRAYEDDYGARRL 233 (271)
Q Consensus 155 ~~~iVG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~-~g~~~i~l~v~~~N~~A~~~ 233 (271)
++||++.+..... ....+ ..++++.|+|||+|+|+++++.+++++.+ .|++++.+.|.+.|.+|+++
T Consensus 77 --~~iG~~~l~~~~~---------~~~~~-~ig~~i~~~~~g~G~~tea~~~l~~~~~~~~~~~ri~~~v~~~N~~S~~v 144 (179)
T PRK10151 77 --ELIGVLSFNRIEP---------LNKTA-YIGYWLDESHQGQGIISQALQALIHHYAQSGELRRFVIKCRVDNPASNQV 144 (179)
T ss_pred --EEEEEEEEEeecc---------CCCce-EEEEEEChhhcCCcHHHHHHHHHHHHHHhhCCccEEEEEEcCCCHHHHHH
Confidence 8999998874311 01222 34678999999999999999999999975 68999999999999999999
Q ss_pred HHhCCCEEeeccCCccccccCccc--eEEEEEecC
Q 024161 234 YSNAGYRVVSSDLPWFSTWIGRKR--RVLMIKRSD 266 (271)
Q Consensus 234 Y~k~GF~~~~~~~~~~~~~~~~~~--~~~m~K~l~ 266 (271)
|+|+||+.++..+... ..++.. ...|.+.+.
T Consensus 145 ~ek~Gf~~~g~~~~~~--~~~g~~~D~~~~~~~~~ 177 (179)
T PRK10151 145 ALRNGFTLEGCLKQAE--YLNGAYDDVNLYARIID 177 (179)
T ss_pred HHHCCCEEEeEeccce--EECCEEEEEEEEEEeec
Confidence 9999999999987765 223332 345655544
No 24
>TIGR03448 mycothiol_MshD mycothiol biosynthesis acetyltransferase. Members of this family are MshD, the acetyltransferase that catalyzes the final step of mycothiol biosynthesis in various members of the Actinomyctes, Mycothiol replaces glutathione in these species.
Probab=99.63 E-value=2e-14 Score=126.82 Aligned_cols=144 Identities=17% Similarity=0.096 Sum_probs=100.3
Q ss_pred cCCCeEEEEccCCcccHHHHHHHHHHhccCCccccchhhHHhhHHHHHHHHHHHHhcCCCCcceEEEEeeCCCCCCCCCC
Q 024161 76 SEYGWKVRKLVRVGEEMREVAFIQAEAFHNPVALFNDVFFEFFKAEVLSGLLYKLRNSPPDRYACLVAEHSNPNDNIEPQ 155 (271)
Q Consensus 76 ~~~~~~IR~at~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Va~~~~~~~~~~~~ 155 (271)
.+.|++||+++ +..|.+.+.++....|....... .+ ......+...... ..+ . .++++..+. .
T Consensus 146 ~~~g~~~r~~~-~~~d~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~--~~~-~-~~~~a~~~~-------~ 208 (292)
T TIGR03448 146 VPDGVTVRAYV-GAPDDAEWLRVNNAAFAWHPEQG-GW----TRADLAERRAEPW--FDP-A-GLFLAFDDA-------P 208 (292)
T ss_pred CCCCeEeeccC-CCcchHHHHHHHHHHhhCCCccC-Cc----CHHHHHHHhhCcC--CCc-C-ceEEEEECC-------C
Confidence 47799999986 35688999888888885421100 11 1111111111111 011 2 256666631 1
Q ss_pred CcEEEEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcEEEEEEEcCCHHHHHHHH
Q 024161 156 RKLVGVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEYLVLRAYEDDYGARRLYS 235 (271)
Q Consensus 156 ~~iVG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y~ 235 (271)
+++||++.+.... ......++..++|+|+|||+|||++|+..+++++++.|+..+.+.|...|.+|++||+
T Consensus 209 ~~~vG~~~~~~~~---------~~~~~~~i~~~~V~p~~rg~GiG~~ll~~~~~~~~~~g~~~v~l~v~~~N~~a~~~y~ 279 (292)
T TIGR03448 209 GELLGFHWTKVHP---------DEPALGEVYVVGVDPAAQGRGLGDALTLIGLHHLAARGLPAVMLYVEADNEAAVRTYE 279 (292)
T ss_pred CcEEEEEEEEecC---------CCCceeEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEEeCCCHHHHHHHH
Confidence 3899998665321 1113455777899999999999999999999999999999999999999999999999
Q ss_pred hCCCEEeecc
Q 024161 236 NAGYRVVSSD 245 (271)
Q Consensus 236 k~GF~~~~~~ 245 (271)
|+||+...+.
T Consensus 280 k~GF~~~~~~ 289 (292)
T TIGR03448 280 KLGFTVAEVD 289 (292)
T ss_pred HcCCEEcccc
Confidence 9999988774
No 25
>PF13527 Acetyltransf_9: Acetyltransferase (GNAT) domain; PDB: 3SXN_C 2I00_D 1M4D_B 1M44_A 1M4G_B 1M4I_A 2OZG_A 2HV2_F 3N7Z_A 3RYO_B ....
Probab=99.61 E-value=2e-14 Score=111.03 Aligned_cols=127 Identities=22% Similarity=0.296 Sum_probs=89.3
Q ss_pred EEEEccCCcccHHHHHHHHHHhccCCccccchhhHHhhHHHHHHHHHHHHhcCCCCcceEEEEeeCCCCCCCCCCCcEEE
Q 024161 81 KVRKLVRVGEEMREVAFIQAEAFHNPVALFNDVFFEFFKAEVLSGLLYKLRNSPPDRYACLVAEHSNPNDNIEPQRKLVG 160 (271)
Q Consensus 81 ~IR~at~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Va~~~~~~~~~~~~~~iVG 160 (271)
+||+++ ++|.+++.+++.++|....... +........+.. . .++++++++ +|||
T Consensus 1 ~iR~~~--~~d~~~i~~l~~~~F~~~~~~~----------~~~~~~~~~~~~----~-~~~~~~~~~---------~ivg 54 (127)
T PF13527_consen 1 EIRPLT--ESDFEQIIELFNEAFGDSESPP----------EIWEYFRNLYGP----G-RCVVAEDDG---------KIVG 54 (127)
T ss_dssp -EEEE---GGGHHHHHHHHHHHTTT-CHHH----------HHHHHHHHHHHT----T-EEEEEEETT---------EEEE
T ss_pred CceECC--HHHHHHHHHHHHHHCCCCCCch----------hhhhhhhcccCc----C-cEEEEEECC---------EEEE
Confidence 489998 9999999999999997532211 111222223322 2 478888876 9999
Q ss_pred EEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcEEEEEEEcCCHHHHHHHHhCCCE
Q 024161 161 VVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEYLVLRAYEDDYGARRLYSNAGYR 240 (271)
Q Consensus 161 ~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y~k~GF~ 240 (271)
.+.+....-... ...-+..++..++|+|+|||+|+|++|++++++.+++.|+..+.+.. . +.+||+|+||+
T Consensus 55 ~~~~~~~~~~~~----g~~~~~~~i~~v~v~p~~R~~Gl~~~L~~~~~~~~~~~g~~~~~l~~--~---~~~~Y~~~G~~ 125 (127)
T PF13527_consen 55 HVGLIPRRLSVG----GKKFKAAYIGDVAVDPEYRGRGLGRQLMRALLERARERGVPFIFLFP--S---SPPFYRRFGFE 125 (127)
T ss_dssp EEEEEEEEEEET----TEEEEEEEEEEEEE-GGGTTSSHHHHHHHHHHHHHHHTT-SEEEEE---S---SHHHHHHTTEE
T ss_pred EEEEEEEEEEEC----CEEEEEEEEEEEEECHHHcCCCHHHHHHHHHHHHHHhCCCCEEEEec--C---ChhhhhcCCCE
Confidence 998875321100 11124678999999999999999999999999999999999777764 2 46999999998
Q ss_pred Ee
Q 024161 241 VV 242 (271)
Q Consensus 241 ~~ 242 (271)
.+
T Consensus 126 ~~ 127 (127)
T PF13527_consen 126 YA 127 (127)
T ss_dssp EE
T ss_pred EC
Confidence 64
No 26
>PRK10514 putative acetyltransferase; Provisional
Probab=99.61 E-value=1.7e-14 Score=113.94 Aligned_cols=126 Identities=17% Similarity=0.150 Sum_probs=88.1
Q ss_pred eEEEEccCCcccHHHHHHHHHHhccCCccccchhhHHhhHHHHHHHHHHHHhcCCCCcceEEEEe-eCCCCCCCCCCCcE
Q 024161 80 WKVRKLVRVGEEMREVAFIQAEAFHNPVALFNDVFFEFFKAEVLSGLLYKLRNSPPDRYACLVAE-HSNPNDNIEPQRKL 158 (271)
Q Consensus 80 ~~IR~at~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Va~-~~~~~~~~~~~~~i 158 (271)
+.||+++ ++|++.+.+++.+.+........ +.........+.... . .. .++++. .++ ++
T Consensus 2 ~~ir~~~--~~D~~~l~~l~~~~~~~~~~~~~----~~~~~~~~~~~~~~~-~---~~-~~~~~~~~~~---------~~ 61 (145)
T PRK10514 2 ISIRRSR--HEEGERLVAIWRRSVDATHDFLS----AEDRAEIEELVRSFL-P---EA-PLWVAVDERD---------QP 61 (145)
T ss_pred ceeeecc--hhhHHHHHHHHHHHHHHhCcccC----chhHHHHHHHHHHHh-c---cC-ceEEEEecCC---------cE
Confidence 4689998 99999999998876532111111 111122222222222 1 12 245554 344 89
Q ss_pred EEEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcEEEEEEEcCCHHHHHHHHhCC
Q 024161 159 VGVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEYLVLRAYEDDYGARRLYSNAG 238 (271)
Q Consensus 159 VG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y~k~G 238 (271)
||++.+.. .++..++|+|+|||+|+|++|++++++.+ +++.+.|...|.+|++||+|+|
T Consensus 62 iG~~~~~~----------------~~~~~~~v~p~~rgkGig~~Ll~~~~~~~-----~~i~~~v~~~N~~a~~~yek~G 120 (145)
T PRK10514 62 VGFMLLSG----------------GHMEALFVDPDVRGCGVGRMLVEHALSLH-----PELTTDVNEQNEQAVGFYKKMG 120 (145)
T ss_pred EEEEEEec----------------CcEeEEEECHHhccCCHHHHHHHHHHHhc-----cccEEEeecCCHHHHHHHHHCC
Confidence 99998752 12668999999999999999999999864 4578999999999999999999
Q ss_pred CEEeeccC
Q 024161 239 YRVVSSDL 246 (271)
Q Consensus 239 F~~~~~~~ 246 (271)
|+..++.+
T Consensus 121 f~~~~~~~ 128 (145)
T PRK10514 121 FKVTGRSE 128 (145)
T ss_pred CEEecccc
Confidence 99998854
No 27
>PRK07922 N-acetylglutamate synthase; Validated
Probab=99.60 E-value=3.5e-14 Score=115.78 Aligned_cols=124 Identities=15% Similarity=0.208 Sum_probs=91.0
Q ss_pred CCeEEEEccCCcccHHHHHHHHHHhccCCccccchhhHHhhHHHHHHHHHHHHhcCCCCcceEEEEe-eCCCCCCCCCCC
Q 024161 78 YGWKVRKLVRVGEEMREVAFIQAEAFHNPVALFNDVFFEFFKAEVLSGLLYKLRNSPPDRYACLVAE-HSNPNDNIEPQR 156 (271)
Q Consensus 78 ~~~~IR~at~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Va~-~~~~~~~~~~~~ 156 (271)
..++||+++ ++|.+.|.++......+. ..... .....+.. ...+++++ .++
T Consensus 4 ~~i~iR~a~--~~D~~~i~~L~~~~~~~~-~~~~~------------~~~~~~~~----~~~~~va~~~~~--------- 55 (169)
T PRK07922 4 GAITVRRAR--TSDVPAIKRLVDPYAQGR-ILLEK------------NLVTLYEA----VQEFWVAEHLDG--------- 55 (169)
T ss_pred CCceeecCC--HhhHHHHHHHHHHHhhcC-ccccc------------hHHHHHhh----cCcEEEEEecCC---------
Confidence 347899998 999999999987644321 11110 00111111 12367877 554
Q ss_pred cEEEEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcEEEEEEEcCCHHHHHHHHh
Q 024161 157 KLVGVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEYLVLRAYEDDYGARRLYSN 236 (271)
Q Consensus 157 ~iVG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y~k 236 (271)
++||++.+.... .+.+.|..++|+|+|||+|||++|+++++++|++.|++.+.+.+. +++||+|
T Consensus 56 ~iiG~~~~~~~~-----------~~~~~i~~l~V~p~~rgkGiG~~Ll~~~~~~a~~~g~~~l~~~~~-----~~~fY~k 119 (169)
T PRK07922 56 EVVGCGALHVMW-----------EDLAEIRTVAVDPAARGRGVGHAIVERLLDVARELGLSRVFVLTF-----EVEFFAR 119 (169)
T ss_pred cEEEEEEEeecC-----------CCceEEEEEEECHHHhCCCHHHHHHHHHHHHHHHcCCCEEEEEec-----cHHHHHH
Confidence 899999877421 134568899999999999999999999999999999999988764 3689999
Q ss_pred CCCEEeecc
Q 024161 237 AGYRVVSSD 245 (271)
Q Consensus 237 ~GF~~~~~~ 245 (271)
+||+.++..
T Consensus 120 ~GF~~~~~~ 128 (169)
T PRK07922 120 HGFVEIDGT 128 (169)
T ss_pred CCCEECccc
Confidence 999998763
No 28
>COG1246 ArgA N-acetylglutamate synthase and related acetyltransferases [Amino acid transport and metabolism]
Probab=99.58 E-value=4.2e-14 Score=110.84 Aligned_cols=122 Identities=14% Similarity=0.174 Sum_probs=96.4
Q ss_pred EEEEccCCcccHHHHHHHHHHhccCCccccchhhHHhhHHHHHHHHHHHHhcCCCCcceEEEEeeCCCCCCCCCCCcEEE
Q 024161 81 KVRKLVRVGEEMREVAFIQAEAFHNPVALFNDVFFEFFKAEVLSGLLYKLRNSPPDRYACLVAEHSNPNDNIEPQRKLVG 160 (271)
Q Consensus 81 ~IR~at~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Va~~~~~~~~~~~~~~iVG 160 (271)
+||.|+ .+|++.|.+++....... . ..+- ..+.+...+.. ++|++.++ .|||
T Consensus 2 ~iR~A~--~~Di~~I~~Li~~~~~~g--i----l~~r----s~~~le~~i~d-------F~i~E~~g---------~viG 53 (153)
T COG1246 2 QIRKAR--ISDIPAILELIRPLELQG--I----LLRR----SREQLEEEIDD-------FTIIERDG---------KVIG 53 (153)
T ss_pred ceeecc--ccchHHHHHHHHHHhhcc--c----cchh----hHHHHHHHHhh-------heeeeeCC---------cEEE
Confidence 689998 999999999998765421 1 1111 22333334433 78999876 9999
Q ss_pred EEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcEEEEEEEcCCHHHHHHHHhCCCE
Q 024161 161 VVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEYLVLRAYEDDYGARRLYSNAGYR 240 (271)
Q Consensus 161 ~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y~k~GF~ 240 (271)
++.+.+. ...+...+-+++|+|+|||+|+|..|+++++..|++.|++.+++-+. .+..||+++||+
T Consensus 54 C~aL~~~----------~~~~~gE~~~laV~pd~r~~G~G~~Ll~~~~~~Ar~~gi~~lf~LTt----~~~~~F~~~GF~ 119 (153)
T COG1246 54 CAALHPV----------LEEDLGELRSLAVHPDYRGSGRGERLLERLLADARELGIKELFVLTT----RSPEFFAERGFT 119 (153)
T ss_pred EEeeccc----------CccCeeeEEEEEECHHhcCCCcHHHHHHHHHHHHHHcCCceeeeeec----ccHHHHHHcCCe
Confidence 9999841 12466779999999999999999999999999999999999999864 367899999999
Q ss_pred Eeec
Q 024161 241 VVSS 244 (271)
Q Consensus 241 ~~~~ 244 (271)
.+..
T Consensus 120 ~vd~ 123 (153)
T COG1246 120 RVDK 123 (153)
T ss_pred ECcc
Confidence 9887
No 29
>PRK10562 putative acetyltransferase; Provisional
Probab=99.58 E-value=1.5e-13 Score=108.85 Aligned_cols=124 Identities=21% Similarity=0.280 Sum_probs=86.8
Q ss_pred EEEccCCcccHHHHHHHHHHhccCCccccchhhHHhhHHHHHHHHHHHHhcCCCCcceEEEEeeCCCCCCCCCCCcEEEE
Q 024161 82 VRKLVRVGEEMREVAFIQAEAFHNPVALFNDVFFEFFKAEVLSGLLYKLRNSPPDRYACLVAEHSNPNDNIEPQRKLVGV 161 (271)
Q Consensus 82 IR~at~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Va~~~~~~~~~~~~~~iVG~ 161 (271)
||+++ .+|++.+.++..+......+.... .. .......+.+.... ....+++..++ ++||+
T Consensus 2 ir~~~--~~D~~~i~~l~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~----~~~~~v~~~~~---------~~iG~ 62 (145)
T PRK10562 2 IREYQ--PSDLPAILQLWLESTIWAHPFIKE---QY-WRESAPLVRDVYLP----AAQTWVWEEDG---------KLLGF 62 (145)
T ss_pred ccccc--chhhHHHHHHHHHhccccCCCCCH---HH-HHHhHHHhhhhhcC----cccEEEEEECC---------EEEEE
Confidence 78898 999999999987653222221111 00 01111222222211 22356666665 89999
Q ss_pred EEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcEEEEEEEcCCHHHHHHHHhCCCEE
Q 024161 162 VDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEYLVLRAYEDDYGARRLYSNAGYRV 241 (271)
Q Consensus 162 ~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y~k~GF~~ 241 (271)
+.+... .++..++|+|+|||+|+|++|++++++. ++.+.+.+...|..|++||+|+||+.
T Consensus 63 ~~~~~~---------------~~i~~~~v~~~~rg~G~g~~ll~~~~~~-----~~~~~~~v~~~N~~s~~~y~k~Gf~~ 122 (145)
T PRK10562 63 VSVLEG---------------RFVGALFVAPKAVRRGIGKALMQHVQQR-----YPHLSLEVYQKNQRAVNFYHAQGFRI 122 (145)
T ss_pred EEEeec---------------cEEEEEEECHHHcCCCHHHHHHHHHHhh-----CCeEEEEEEcCChHHHHHHHHCCCEE
Confidence 987521 1377899999999999999999988774 46789999999999999999999999
Q ss_pred eec
Q 024161 242 VSS 244 (271)
Q Consensus 242 ~~~ 244 (271)
++.
T Consensus 123 ~~~ 125 (145)
T PRK10562 123 VDS 125 (145)
T ss_pred ccc
Confidence 987
No 30
>KOG3396 consensus Glucosamine-phosphate N-acetyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.57 E-value=7.8e-14 Score=105.94 Aligned_cols=141 Identities=16% Similarity=0.262 Sum_probs=106.7
Q ss_pred cCCCeEEEEccCCcccHHH-HHHHHHHhccCCccccchhhHHhhHHHHHHHHHHHHhcCCCCcceEEEEeeCCCCCCCCC
Q 024161 76 SEYGWKVRKLVRVGEEMRE-VAFIQAEAFHNPVALFNDVFFEFFKAEVLSGLLYKLRNSPPDRYACLVAEHSNPNDNIEP 154 (271)
Q Consensus 76 ~~~~~~IR~at~~~~D~~~-i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Va~~~~~~~~~~~ 154 (271)
.|.+|.||++. .+|+.. ..+++.+.-.. +.. .++++...+...- . ..+.|...|+++..
T Consensus 3 ~P~~~~lR~L~--~~D~~kGf~elL~qLT~v--G~v-------t~e~F~krf~~mk-~-~~~~Y~i~Vied~~------- 62 (150)
T KOG3396|consen 3 LPDGFKLRPLE--EDDYGKGFIELLKQLTSV--GVV-------TREQFEKRFEAMK-K-SGDWYYIVVIEDKE------- 62 (150)
T ss_pred CCCceEEeecc--cccccchHHHHHHHHhhc--ccc-------CHHHHHHHHHHHH-h-cCCcEEEEEEEeCC-------
Confidence 56789999998 999987 77777765432 222 1222333333332 2 22457677777765
Q ss_pred CCcEEEEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcEEEEEEEcCCHHHHHHH
Q 024161 155 QRKLVGVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEYLVLRAYEDDYGARRLY 234 (271)
Q Consensus 155 ~~~iVG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y 234 (271)
.++|||++.+-... ++.+..+...+|+.+.|+++|||+++|+.|+..+...+++.|+-++.|+|.+.| ++||
T Consensus 63 s~~vigtatL~IE~-----KfIh~~g~rGhiEDVVV~~~~rgk~LGkllv~~Lv~l~k~lgcYKi~LdC~~~n---v~FY 134 (150)
T KOG3396|consen 63 SEKVIGTATLFIER-----KFIHGCGSRGHIEDVVVDSEYRGKQLGKLLVETLVDLAKSLGCYKIILDCDPKN---VKFY 134 (150)
T ss_pred cCeEEEEEEEEEeh-----hhhhcccccCceeEEEeChhhhhhHHhHHHHHHHHHHHHhcCcEEEEEecchhh---hhHH
Confidence 46999999988643 334666667789999999999999999999999999999999999999999985 5999
Q ss_pred HhCCCEEeec
Q 024161 235 SNAGYRVVSS 244 (271)
Q Consensus 235 ~k~GF~~~~~ 244 (271)
+|+||.....
T Consensus 135 eKcG~s~~~~ 144 (150)
T KOG3396|consen 135 EKCGYSNAGN 144 (150)
T ss_pred HHcCccccch
Confidence 9999987653
No 31
>PRK07757 acetyltransferase; Provisional
Probab=99.55 E-value=1.3e-13 Score=109.99 Aligned_cols=122 Identities=25% Similarity=0.349 Sum_probs=89.4
Q ss_pred eEEEEccCCcccHHHHHHHHHHhccCCccccchhhHHhhHHHHHHHHHHHHhcCCCCcceEEEEeeCCCCCCCCCCCcEE
Q 024161 80 WKVRKLVRVGEEMREVAFIQAEAFHNPVALFNDVFFEFFKAEVLSGLLYKLRNSPPDRYACLVAEHSNPNDNIEPQRKLV 159 (271)
Q Consensus 80 ~~IR~at~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Va~~~~~~~~~~~~~~iV 159 (271)
+.||+++ ++|++.+.++..+......... .. .+.+...+. .++++..++ ++|
T Consensus 2 ~~ir~~~--~~D~~~l~~l~~~~~~~~~~~~------~~----~~~~~~~~~-------~~~i~~~~~---------~lv 53 (152)
T PRK07757 2 MEIRKAR--LSDVKAIHALINVYAKKGLMLP------RS----LDELYENIR-------DFYVAEEEG---------EIV 53 (152)
T ss_pred ceEeeCC--cccHHHHHHHHHHHHhcCCccC------CC----HHHHHhccC-------cEEEEEECC---------EEE
Confidence 4699998 9999999999876543211111 01 111222221 256666665 999
Q ss_pred EEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcEEEEEEEcCCHHHHHHHHhCCC
Q 024161 160 GVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEYLVLRAYEDDYGARRLYSNAGY 239 (271)
Q Consensus 160 G~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y~k~GF 239 (271)
|++.+.... .+..++..++|+|+|||+|+|++|++++++.|.+.|+..+.+.+. +.+||+|+||
T Consensus 54 G~~~l~~~~-----------~~~~~i~~v~V~p~~rg~Glg~~Ll~~l~~~a~~~g~~~i~~~~~-----~~~~Y~k~GF 117 (152)
T PRK07757 54 GCCALHILW-----------EDLAEIRSLAVSEDYRGQGIGRMLVEACLEEARELGVKRVFALTY-----QPEFFEKLGF 117 (152)
T ss_pred EEEEEEecc-----------CCceEEEEEEECHHHcCCCHHHHHHHHHHHHHHhCCCCeEEEEeC-----cHHHHHHCCC
Confidence 999987421 234568899999999999999999999999999999998876652 4689999999
Q ss_pred EEeecc
Q 024161 240 RVVSSD 245 (271)
Q Consensus 240 ~~~~~~ 245 (271)
+..+..
T Consensus 118 ~~~~~~ 123 (152)
T PRK07757 118 REVDKE 123 (152)
T ss_pred EEcccc
Confidence 998773
No 32
>PRK09831 putative acyltransferase; Provisional
Probab=99.55 E-value=6.2e-14 Score=111.44 Aligned_cols=125 Identities=18% Similarity=0.212 Sum_probs=85.2
Q ss_pred EEEEccCCcccHHHHHHHHHHhccCCcc-ccc-hhhHHhhHHHHHHHHHHHHhcCCCCcceEEEEeeCCCCCCCCCCCcE
Q 024161 81 KVRKLVRVGEEMREVAFIQAEAFHNPVA-LFN-DVFFEFFKAEVLSGLLYKLRNSPPDRYACLVAEHSNPNDNIEPQRKL 158 (271)
Q Consensus 81 ~IR~at~~~~D~~~i~~l~~~~f~~~~~-~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Va~~~~~~~~~~~~~~i 158 (271)
+||+++ ++|++.+.++..+++..... .+. +....+. ......+...+.. . .++|++.++ ++
T Consensus 2 ~ir~a~--~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~----~-~~~v~~~~~---------~i 64 (147)
T PRK09831 2 QIRNYQ--PGDFQQLCAIFIRAVTMTASQHYSPQQIAAWA-QIDESRWKEKLAK----S-QVRVAVINA---------QP 64 (147)
T ss_pred ccccCC--hhhHHHHHHHHHHHHHHhhhhcCCHHHHHhcc-CCCHHHHHHHHhc----C-ceEEEEECC---------EE
Confidence 589998 99999999999987643211 111 0000000 0001122222221 1 367777666 99
Q ss_pred EEEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcEEEEEEEcCCHHHHHHHHhCC
Q 024161 159 VGVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEYLVLRAYEDDYGARRLYSNAG 238 (271)
Q Consensus 159 VG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y~k~G 238 (271)
||++.+.. .++..++|+|+|||+|||++|++++++.+.+ +. +.. |..|++||+|+|
T Consensus 65 iG~~~~~~----------------~~i~~~~v~p~~~g~GiG~~Ll~~~~~~~~~-----l~--v~~-~~~a~~~Y~k~G 120 (147)
T PRK09831 65 VGFITCIE----------------HYIDMLFVDPEYTRRGVASALLKPLIKSESE-----LT--VDA-SITAKPFFERYG 120 (147)
T ss_pred EEEEEehh----------------ceeeeEEECHHHcCCCHHHHHHHHHHHHhhh-----eE--eec-chhhHHHHHHCC
Confidence 99988751 1478899999999999999999999998865 33 333 577999999999
Q ss_pred CEEeeccC
Q 024161 239 YRVVSSDL 246 (271)
Q Consensus 239 F~~~~~~~ 246 (271)
|+.+++.+
T Consensus 121 f~~~g~~~ 128 (147)
T PRK09831 121 FQTVKQQR 128 (147)
T ss_pred CEEeeccc
Confidence 99999965
No 33
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=99.55 E-value=1.5e-13 Score=123.16 Aligned_cols=133 Identities=14% Similarity=0.153 Sum_probs=97.0
Q ss_pred cCCCeEEEEccCCcccHHHHHHHHHHh--ccCCccccchhhHHhhHHHHHHHHHHHHhcCCCCcceEEEEeeCCCCCCCC
Q 024161 76 SEYGWKVRKLVRVGEEMREVAFIQAEA--FHNPVALFNDVFFEFFKAEVLSGLLYKLRNSPPDRYACLVAEHSNPNDNIE 153 (271)
Q Consensus 76 ~~~~~~IR~at~~~~D~~~i~~l~~~~--f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Va~~~~~~~~~~ 153 (271)
....++||+++ ++|+++|.++..+. |......+ . .+.+...+.. + .++++...+. .
T Consensus 183 l~m~~~Ir~a~--~~Dl~ri~~L~~~tnqfn~~~~~~-------s----~~~i~~~l~~---~--~~~~~~~~d~----~ 240 (320)
T TIGR01686 183 LELSLNISKND--EQNVQRVEELLGRTNQFNATYTRL-------N----QEDVAQHMQK---E--EIVTVSMSDR----F 240 (320)
T ss_pred CCCEEEEEECC--hhhhHHHHHHHHhHHhhhccCccC-------C----HHHHHHHhcC---C--CEEEEEEEec----C
Confidence 45557999998 99999999998876 43211111 1 1233334432 1 2344432110 0
Q ss_pred CCCcEEEEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcEEEEEEE--cCCHHHH
Q 024161 154 PQRKLVGVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEYLVLRAY--EDDYGAR 231 (271)
Q Consensus 154 ~~~~iVG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~--~~N~~A~ 231 (271)
+++.+||++.+... .+.++|..++|+|.+||+|||++||+++++.|++.|++.+.+.+. ..|.+|+
T Consensus 241 gd~givG~~~~~~~------------~~~~~I~~l~vs~r~~grGig~~Ll~~l~~~a~~~G~~~i~l~v~~~~~N~~A~ 308 (320)
T TIGR01686 241 GDSGIIGIFVFEKK------------EGNLFIDDLCMSCRALGRGVETRMLRWLFEQALDLGNHNARLYYRRTERNMPFL 308 (320)
T ss_pred CCCceEEEEEEEec------------CCcEEEEEEEEcHhHhcCcHHHHHHHHHHHHHHHcCCCeEEEEEeeCCCchHHH
Confidence 02379999987642 245789999999999999999999999999999999999999885 4899999
Q ss_pred HHHHhCCCEEe
Q 024161 232 RLYSNAGYRVV 242 (271)
Q Consensus 232 ~~Y~k~GF~~~ 242 (271)
+||+++||+.+
T Consensus 309 ~fY~~~GF~~~ 319 (320)
T TIGR01686 309 SFYEQIGFEDE 319 (320)
T ss_pred HHHHHcCCccC
Confidence 99999999864
No 34
>PRK15130 spermidine N1-acetyltransferase; Provisional
Probab=99.55 E-value=2.9e-13 Score=111.66 Aligned_cols=146 Identities=17% Similarity=0.160 Sum_probs=99.2
Q ss_pred CCCeEEEEccCCcccHHHHHHHHHHhccCCccccchhhHHhhHHHHHHHHHHHHhcCCCCcceEEEEeeCCCCCCCCCCC
Q 024161 77 EYGWKVRKLVRVGEEMREVAFIQAEAFHNPVALFNDVFFEFFKAEVLSGLLYKLRNSPPDRYACLVAEHSNPNDNIEPQR 156 (271)
Q Consensus 77 ~~~~~IR~at~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Va~~~~~~~~~~~~~ 156 (271)
...+++|+++ ++|++.+.++..+..... .+.. ..+.. ..+..+.+...+.. . ...+|+++.++
T Consensus 4 ~~~l~lR~~~--~~D~~~l~~~~~~~~~~~-~~~~-~~~~~-~~~~~~~~~~~~~~-~--~~~~~~i~~~g--------- 66 (186)
T PRK15130 4 AHSVKLRPLE--REDLRFVHQLDNNASVMR-YWFE-EPYEA-FVELSDLYDKHIHD-Q--SERRFVVECDG--------- 66 (186)
T ss_pred CCeeEEecCC--HHHHHHHHHHhcChHHHh-hcCC-ccccc-HHHHHHHHHHhhhc-c--cCcEEEEEECC---------
Confidence 3458899998 999999998854331100 0000 00000 01111222222222 1 22356666665
Q ss_pred cEEEEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHH-cCCcEEEEEEEcCCHHHHHHHH
Q 024161 157 KLVGVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVL-WGFEYLVLRAYEDDYGARRLYS 235 (271)
Q Consensus 157 ~iVG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~-~g~~~i~l~v~~~N~~A~~~Y~ 235 (271)
++||++.+..... ..... ..+++|+|+|||+|+|+++++.+++++.+ .|+.+|.+.|...|.+|++||+
T Consensus 67 ~~iG~~~~~~~~~---------~~~~~-~~~~~v~~~~~g~G~g~~l~~~l~~~~~~~~~~~rv~~~v~~~N~~s~~~ye 136 (186)
T PRK15130 67 EKAGLVELVEINH---------VHRRA-EFQIIISPEYQGKGLATRAAKLAMDYGFTVLNLYKLYLIVDKENEKAIHIYR 136 (186)
T ss_pred EEEEEEEEEeecC---------CCCeE-EEEEEECHHHcCCCHHHHHHHHHHHHHhhcCCceEEEEEEccCCHHHHHHHH
Confidence 9999998864211 01122 34799999999999999999999999975 7999999999999999999999
Q ss_pred hCCCEEeeccCCcc
Q 024161 236 NAGYRVVSSDLPWF 249 (271)
Q Consensus 236 k~GF~~~~~~~~~~ 249 (271)
|+||+.++..+.+.
T Consensus 137 k~GF~~~~~~~~~~ 150 (186)
T PRK15130 137 KLGFEVEGELIHEF 150 (186)
T ss_pred HCCCEEEEEEeheE
Confidence 99999999977654
No 35
>PHA01807 hypothetical protein
Probab=99.55 E-value=1.6e-13 Score=109.63 Aligned_cols=126 Identities=16% Similarity=0.109 Sum_probs=88.0
Q ss_pred cccHHHHHHHHHHhccCCccccchhhHHhhHHHHHHHHHHHHhcCCCCcceEEEEeeCCCCCCCCCCCcEEEEEEEEeec
Q 024161 89 GEEMREVAFIQAEAFHNPVALFNDVFFEFFKAEVLSGLLYKLRNSPPDRYACLVAEHSNPNDNIEPQRKLVGVVDVTVLR 168 (271)
Q Consensus 89 ~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Va~~~~~~~~~~~~~~iVG~~~l~~~~ 168 (271)
.+|++.+..+..+++.+ .+....+ +. .++....+...+.+ .....++++.++ ++||++.+....
T Consensus 11 ~~d~~~~~~l~l~~l~e-~p~~~~w-~s--~ee~~~~~~~~~~~---~~~~~lva~~dg---------~lvG~~~l~~~~ 74 (153)
T PHA01807 11 AGTPSELQGLCWLAIQE-LEEFTLF-RS--KEEALERILDSTES---NDRTELLVFRDG---------KLAGIAVLVFED 74 (153)
T ss_pred hCCHHHHHHHHHHHHHh-CccCCCC-CC--hHHHHHHHHHHhhC---CCceEEEEEECC---------EEEEEEEEEcCC
Confidence 78999999988887754 2211111 11 12222333333322 122357777766 899999987532
Q ss_pred CCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcEEEEEEEcCCHHHHHHHHhC
Q 024161 169 DDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEYLVLRAYEDDYGARRLYSNA 237 (271)
Q Consensus 169 ~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y~k~ 237 (271)
.. .......+..++|+|+|||+|||++||+.++++|++.|+..+.++|...|.+|++||++.
T Consensus 75 ~~-------~~~~i~~l~~lYV~pe~RG~GiG~~Ll~~~~~~Ar~~G~~~l~l~v~~~n~~a~~~y~~~ 136 (153)
T PHA01807 75 DP-------HVGPCLGVQWQYVLPEYRNAGVAREFLRELIRLAGEGNLPLIAFSHREGEGRYTIHYRRV 136 (153)
T ss_pred Cc-------ceeeeccceeEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEecCCcHHHHHHHHhc
Confidence 11 111223355689999999999999999999999999999999999999999999999985
No 36
>TIGR03585 PseH pseudaminic acid biosynthesis N-acetyl transferase. Sequences in this family are members of the pfam00583 (GNAT) superfamily of acetyltransferases and are proposed to perform a N-acetylation step in the process of pseudaminic acid biosynthesis in Campylobacter species. This gene is commonly observed in apparent operons with other genes responsible for the biosynthesis of pseudaminic acid and as a component of flagellar and exopolysaccharide biosynthesis loci. Significantly, many genomes containing other components of this pathway lack this gene, indicating that some other N-acetyl transferases may be incolved and/or the step is optional, resulting in a non-acetylated pseudaminic acid variant sugar.
Probab=99.54 E-value=2.1e-13 Score=108.89 Aligned_cols=150 Identities=15% Similarity=0.117 Sum_probs=100.0
Q ss_pred EEEEccCCcccHHHHHHHHHHhccCCccccchhhHHhhHHHHHHHHHHHHhcCCCCcceEEEEeeCCCCCCCCCCCcEEE
Q 024161 81 KVRKLVRVGEEMREVAFIQAEAFHNPVALFNDVFFEFFKAEVLSGLLYKLRNSPPDRYACLVAEHSNPNDNIEPQRKLVG 160 (271)
Q Consensus 81 ~IR~at~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Va~~~~~~~~~~~~~~iVG 160 (271)
.+|+++ ++|++.+.++..+........... ..+..+....+. .+.. .+ ...++++..++ ++||
T Consensus 2 ~lr~~~--~~D~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-~~~~-~~-~~~~~~~~~~g---------~~vG 64 (156)
T TIGR03585 2 NFTPLN--SEELELVLEWRNHPDVRANMYSDH---LIDWEEHLHFIE-ALKQ-DP-NRRYWIVCQES---------RPIG 64 (156)
T ss_pred CcccCC--HHHHHHHHHhhCCHHHHhhccCcC---CCCHHHHHHHHH-Hhhc-CC-CceEEEEEECC---------EEEE
Confidence 378898 999999999765322110000000 011222222222 3322 22 22466666665 9999
Q ss_pred EEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHH-cCCcEEEEEEEcCCHHHHHHHHhCCC
Q 024161 161 VVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVL-WGFEYLVLRAYEDDYGARRLYSNAGY 239 (271)
Q Consensus 161 ~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~-~g~~~i~l~v~~~N~~A~~~Y~k~GF 239 (271)
++.+..... ......+ ++++.|++| +|+|++++..++++|.+ .+++++.+.|...|.+|++||+|+||
T Consensus 65 ~~~~~~~~~---------~~~~~~~-g~~~~~~~~-~G~g~~~~~~~~~~a~~~~~~~~i~~~v~~~N~~s~~~y~k~Gf 133 (156)
T TIGR03585 65 VISFTDINL---------VHKSAFW-GIYANPFCK-PGVGSVLEEAALEYAFEHLGLHKLSLEVLEFNNKALKLYEKFGF 133 (156)
T ss_pred EEEEEecCh---------hhCeEEE-EEEeChhhh-cCchHHHHHHHHHHHHhhCCeeEEEEEEeccCHHHHHHHHHcCC
Confidence 999874221 0122233 566999999 99999999999999985 69999999999999999999999999
Q ss_pred EEeeccCCccccccCccceEE
Q 024161 240 RVVSSDLPWFSTWIGRKRRVL 260 (271)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~ 260 (271)
+.++..+.+. ...+..++.
T Consensus 134 ~~~g~~~~~~--~~~g~~~d~ 152 (156)
T TIGR03585 134 EREGVFRQGI--FKEGEYYDV 152 (156)
T ss_pred eEeeeehhhe--eECCeEEEE
Confidence 9999988776 234444443
No 37
>PF13302 Acetyltransf_3: Acetyltransferase (GNAT) domain; PDB: 3TTH_C 3JUW_A 2ZXV_A 2Z0Z_A 2VI7_B 3EG7_F 1YRE_C 3IGR_B 3FBU_A 2FCK_A ....
Probab=99.53 E-value=4.5e-13 Score=104.97 Aligned_cols=140 Identities=13% Similarity=0.177 Sum_probs=91.5
Q ss_pred eEEEEccCCcccHHHHHHHHHHhccCCccccchhhHHhhHHHHHHHHHHHHhcCCCCcceEEEEeeCCCCCCCCCCCcEE
Q 024161 80 WKVRKLVRVGEEMREVAFIQAEAFHNPVALFNDVFFEFFKAEVLSGLLYKLRNSPPDRYACLVAEHSNPNDNIEPQRKLV 159 (271)
Q Consensus 80 ~~IR~at~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Va~~~~~~~~~~~~~~iV 159 (271)
++||+++ ++|++.+.++....-.....-+... . ....+..+.+...........+.+|+++..+ .+++|
T Consensus 2 l~lr~~~--~~D~~~i~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-------~~~~i 70 (142)
T PF13302_consen 2 LTLRPLT--PEDADAIYEWRSDPEIRRYLPWGPP-W-PTLEEAEEWIQSRQDSWENHGYYYFAIEDKD-------DGEII 70 (142)
T ss_dssp EEEEE-H--GGGHHHHHHHHTTTTHCTTSSTTTS-S-SSHHHHHHHHHHHHHCHHEETEEEEEEEETT-------TTEEE
T ss_pred EEEEcCC--HHHHHHHHHHhcCHHHHHhcCCCCC-C-CCHHHHHHHHHHhhhhhhcccceEEEEEecc-------CCceE
Confidence 5799998 9999999998742111111001110 0 1333344444422211011124456666554 24799
Q ss_pred EEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHH-HHcCCcEEEEEEEcCCHHHHHHHHhCC
Q 024161 160 GVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLA-VLWGFEYLVLRAYEDDYGARRLYSNAG 238 (271)
Q Consensus 160 G~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a-~~~g~~~i~l~v~~~N~~A~~~Y~k~G 238 (271)
|++.+.... .....+. .++.|.|+|||+|+|+++++.+++++ .+.|+.++.+.+.++|.+|+++++|+|
T Consensus 71 G~i~~~~~~---------~~~~~~e-ig~~i~~~~~g~G~~~~~~~~~~~~~~~~~~~~~i~a~~~~~N~~s~~~~~k~G 140 (142)
T PF13302_consen 71 GFIGLYNID---------KNNNWAE-IGYWIGPDYRGKGYGTEALKLLLDWAFEELGLHRIIATVMADNEASRRLLEKLG 140 (142)
T ss_dssp EEEEEEEEE---------TTTTEEE-EEEEEEGGGTTSSHHHHHHHHHHHHHHHTSTSSEEEEEEETT-HHHHHHHHHTT
T ss_pred EEeeeeecc---------cCCCccc-cccchhHHHHhhhHHHHHHHHHHHHHHhcCCcEEEEEEECcCCHHHHHHHHHcC
Confidence 999995321 1123333 56999999999999999999999999 578999999999999999999999999
Q ss_pred CE
Q 024161 239 YR 240 (271)
Q Consensus 239 F~ 240 (271)
|+
T Consensus 141 F~ 142 (142)
T PF13302_consen 141 FE 142 (142)
T ss_dssp -E
T ss_pred CC
Confidence 96
No 38
>PLN02825 amino-acid N-acetyltransferase
Probab=99.52 E-value=9.9e-14 Score=130.14 Aligned_cols=122 Identities=19% Similarity=0.152 Sum_probs=93.3
Q ss_pred EEEEccCCcccHHHHHHHHHHhccCCccccchhhHHhhHHHHHHHHHHHHhcCCCCcceEEEEeeCCCCCCCCCCCcEEE
Q 024161 81 KVRKLVRVGEEMREVAFIQAEAFHNPVALFNDVFFEFFKAEVLSGLLYKLRNSPPDRYACLVAEHSNPNDNIEPQRKLVG 160 (271)
Q Consensus 81 ~IR~at~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Va~~~~~~~~~~~~~~iVG 160 (271)
.||+++ .+|++.|.+++........... .. .+.+...+ ..++|++.++ +|||
T Consensus 369 ~IR~At--~eDi~~I~~Li~~lee~g~lv~------rs----~e~le~ei-------~~f~V~e~Dg---------~IVG 420 (515)
T PLN02825 369 GTRMAR--VEDLAGIRQIIRPLEESGILVR------RT----DEELLRAL-------DSFVVVEREG---------SIIA 420 (515)
T ss_pred hheeCC--HHHHHHHHHHHHHHHHcCCCcC------CC----HHHHHhcC-------CcEEEEEECC---------EEEE
Confidence 589998 9999999999987654221111 01 11222111 1378888876 9999
Q ss_pred EEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcEEEEEEEcCCHHHHHHHHhCCCE
Q 024161 161 VVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEYLVLRAYEDDYGARRLYSNAGYR 240 (271)
Q Consensus 161 ~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y~k~GF~ 240 (271)
++.+.+.. ....++|..++|+|+|||+|+|++||++++++|++.|++.+.+.+ +.+.+||+++||+
T Consensus 421 ~aal~~~~----------~~~~aEI~~laV~P~yRGkGiG~~LL~~le~~Ar~~G~~~L~Llt----t~a~~fY~k~GF~ 486 (515)
T PLN02825 421 CAALFPFF----------EEKCGEVAAIAVSPECRGQGQGDKLLDYIEKKAASLGLEKLFLLT----TRTADWFVRRGFS 486 (515)
T ss_pred EEEEEeec----------CCCcEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEe----CcHHHHHHHCCCE
Confidence 99887421 124567999999999999999999999999999999999999986 3478999999999
Q ss_pred Eeec
Q 024161 241 VVSS 244 (271)
Q Consensus 241 ~~~~ 244 (271)
..+.
T Consensus 487 ~~~~ 490 (515)
T PLN02825 487 ECSI 490 (515)
T ss_pred EeCh
Confidence 9776
No 39
>PRK12308 bifunctional argininosuccinate lyase/N-acetylglutamate synthase; Provisional
Probab=99.51 E-value=2e-13 Score=132.07 Aligned_cols=126 Identities=16% Similarity=0.131 Sum_probs=94.5
Q ss_pred cCCCeEEEEccCCcccHHHHHHHHHHhccCCccccchhhHHhhHHHHHHHHHHHHhcCCCCcceEEEEeeCCCCCCCCCC
Q 024161 76 SEYGWKVRKLVRVGEEMREVAFIQAEAFHNPVALFNDVFFEFFKAEVLSGLLYKLRNSPPDRYACLVAEHSNPNDNIEPQ 155 (271)
Q Consensus 76 ~~~~~~IR~at~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Va~~~~~~~~~~~~ 155 (271)
.+.|++||+++ ++|++.|.++....+..... .+... +.+.. . ...++|++.++
T Consensus 460 ~~~gm~IR~a~--~~D~~~I~~L~~~~~~~~~~------~~~~~----~~l~~---~----~~~~~Va~~~g-------- 512 (614)
T PRK12308 460 DTSGVKVRPAR--LTDIDAIEGMVAYWAGLGEN------LPRSR----NELVR---D----IGSFAVAEHHG-------- 512 (614)
T ss_pred CCCCCEEEECC--HHHHHHHHHHHHHHHhhhcc------cccCH----HHHhc---c----cCcEEEEEECC--------
Confidence 37889999998 99999999998654432111 11111 11111 1 11367888776
Q ss_pred CcEEEEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcEEEEEEEcCCHHHHHHHH
Q 024161 156 RKLVGVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEYLVLRAYEDDYGARRLYS 235 (271)
Q Consensus 156 ~~iVG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y~ 235 (271)
+|||++.+.... ..+++|..++|+|+|||+|||+.|++++++++++.|++.+.+.+. +.+||+
T Consensus 513 -~IVG~~~l~~~~-----------~~~~~I~~i~V~P~~rGkGIGk~Ll~~l~~~ak~~g~~~i~l~~~-----a~~FYe 575 (614)
T PRK12308 513 -EVTGCASLYIYD-----------SGLAEIRSLGVEAGWQVQGQGSALVQYLVEKARQMAIKKVFVLTR-----VPEFFM 575 (614)
T ss_pred -EEEEEEEEEEcC-----------CCeEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEeeC-----cHHHHH
Confidence 899999887421 245679999999999999999999999999999999999988642 569999
Q ss_pred hCCCEEeecc
Q 024161 236 NAGYRVVSSD 245 (271)
Q Consensus 236 k~GF~~~~~~ 245 (271)
|+||+.++..
T Consensus 576 k~GF~~~~~~ 585 (614)
T PRK12308 576 KQGFSPTSKS 585 (614)
T ss_pred HCCCEECCcc
Confidence 9999998874
No 40
>PRK05279 N-acetylglutamate synthase; Validated
Probab=99.49 E-value=3e-13 Score=126.31 Aligned_cols=123 Identities=15% Similarity=0.144 Sum_probs=90.6
Q ss_pred eEEEEccCCcccHHHHHHHHHHhccCCccccchhhHHhhHHHHHHHHHHHHhcCCCCcceEEEEeeCCCCCCCCCCCcEE
Q 024161 80 WKVRKLVRVGEEMREVAFIQAEAFHNPVALFNDVFFEFFKAEVLSGLLYKLRNSPPDRYACLVAEHSNPNDNIEPQRKLV 159 (271)
Q Consensus 80 ~~IR~at~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Va~~~~~~~~~~~~~~iV 159 (271)
+.||+++ .+|+++|.+++...... .+.. +.. .+.+.... ..+++++.++ ++|
T Consensus 295 ~~IR~at--~~D~~~I~~L~~~~~~~--~~~~----~~~----~~~l~~~~-------~~~~va~~dg---------~iV 346 (441)
T PRK05279 295 EQLRRAT--IDDVGGILELIRPLEEQ--GILV----RRS----REQLEREI-------DKFTVIERDG---------LII 346 (441)
T ss_pred HHeEeCC--HHHHHHHHHHHHHHHHc--CCcc----ccC----HHHHhccc-------CcEEEEEECC---------EEE
Confidence 5789998 99999999998653221 1110 001 11111111 1367888776 999
Q ss_pred EEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcEEEEEEEcCCHHHHHHHHhCCC
Q 024161 160 GVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEYLVLRAYEDDYGARRLYSNAGY 239 (271)
Q Consensus 160 G~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y~k~GF 239 (271)
|++.+.... ....++|..++|+|+|||+|+|++|+++++++|++.|+..+.+.+ ..+++||+|+||
T Consensus 347 G~~~~~~~~----------~~~~~~I~~l~V~p~~Rg~GiG~~Ll~~l~~~a~~~g~~~l~l~~----~~a~~fY~k~GF 412 (441)
T PRK05279 347 GCAALYPFP----------EEKMGEMACLAVHPDYRGSGRGERLLKRIEQRARQLGLKRLFVLT----TRTAHWFLERGF 412 (441)
T ss_pred EEEEEEEcC----------CCCeEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEec----chHHHHHHHCcC
Confidence 999876421 124567999999999999999999999999999999999887653 458999999999
Q ss_pred EEeec
Q 024161 240 RVVSS 244 (271)
Q Consensus 240 ~~~~~ 244 (271)
+.++.
T Consensus 413 ~~~g~ 417 (441)
T PRK05279 413 VPVDV 417 (441)
T ss_pred EECCh
Confidence 99987
No 41
>PRK10314 putative acyltransferase; Provisional
Probab=99.49 E-value=5.8e-13 Score=106.81 Aligned_cols=136 Identities=14% Similarity=0.111 Sum_probs=94.2
Q ss_pred CcccHHHHHHHHHHhccCCcccc-chhhHHhhHHHHHHHHHHHHhcCCCCcceEEEEeeCCCCCCCCCCCcEEEEEEEEe
Q 024161 88 VGEEMREVAFIQAEAFHNPVALF-NDVFFEFFKAEVLSGLLYKLRNSPPDRYACLVAEHSNPNDNIEPQRKLVGVVDVTV 166 (271)
Q Consensus 88 ~~~D~~~i~~l~~~~f~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Va~~~~~~~~~~~~~~iVG~~~l~~ 166 (271)
+.+++.++..+..++|..+.... .++ + .. ...+... .+++..++ ++||++.+..
T Consensus 13 ~~~~~~~~~~lR~~VF~~eq~~~~~e~----------D----~~-d~~~~~~-h~~~~~~~---------~~vg~~r~~~ 67 (153)
T PRK10314 13 SVSQLYALLQLRCAVFVVEQNCPYQDI----------D----GD-DLTGDNR-HILGWKND---------ELVAYARILK 67 (153)
T ss_pred CHHHHHHHHHHHHHHhhhhcCCCcccc----------C----CC-CCCCCcE-EEEEEECC---------EEEEEEEEec
Confidence 37888899999999986432211 010 0 00 0011123 34455555 8999999874
Q ss_pred ecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHc-CCcEEEEEEEcCCHHHHHHHHhCCCEEeecc
Q 024161 167 LRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLW-GFEYLVLRAYEDDYGARRLYSNAGYRVVSSD 245 (271)
Q Consensus 167 ~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~-g~~~i~l~v~~~N~~A~~~Y~k~GF~~~~~~ 245 (271)
.. ......+|..++|+|+|||+|||++|++++++++++. +...+.|.+ +..+.+||+|+||+.++..
T Consensus 68 ~~---------~~~~~~~i~rv~V~~~~rG~GiG~~Lm~~~~~~~~~~~~~~~i~L~a---~~~a~~fY~k~GF~~~g~~ 135 (153)
T PRK10314 68 SD---------DDLEPVVIGRVIVSEALRGEKVGQQLMSKTLESCTRHWPDKPVYLGA---QAHLQNFYQSFGFIPVTEV 135 (153)
T ss_pred CC---------CCCCCEEEEEEEECHHHhCCCHHHHHHHHHHHHHHHHCCCCcEEEeh---HHHHHHHHHHCCCEECCCc
Confidence 21 1123467999999999999999999999999999874 777888885 4568999999999998872
Q ss_pred CCccccccCccceEEEEEec
Q 024161 246 LPWFSTWIGRKRRVLMIKRS 265 (271)
Q Consensus 246 ~~~~~~~~~~~~~~~m~K~l 265 (271)
| ...+-++..|.|.+
T Consensus 136 --f---~~~Gi~h~~M~~~~ 150 (153)
T PRK10314 136 --Y---EEDGIPHIGMAREV 150 (153)
T ss_pred --c---ccCCCCcHhhhhhh
Confidence 2 23445677787765
No 42
>TIGR01890 N-Ac-Glu-synth amino-acid N-acetyltransferase. This model represents a clade of amino-acid N-acetyltransferases acting mainly on glutamate in the first step of the "acetylated" ornithine biosynthesis pathway. For this reason it is also called N-acetylglutamate synthase. The enzyme may also act on aspartate.
Probab=99.48 E-value=4.7e-13 Score=124.49 Aligned_cols=123 Identities=15% Similarity=0.198 Sum_probs=90.6
Q ss_pred EEEEccCCcccHHHHHHHHHHhccCCccccchhhHHhhHHHHHHHHHHHHhcCCCCcceEEEEeeCCCCCCCCCCCcEEE
Q 024161 81 KVRKLVRVGEEMREVAFIQAEAFHNPVALFNDVFFEFFKAEVLSGLLYKLRNSPPDRYACLVAEHSNPNDNIEPQRKLVG 160 (271)
Q Consensus 81 ~IR~at~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Va~~~~~~~~~~~~~~iVG 160 (271)
.||+++ .+|+++|.+++...... .+.. +. ..+.+.... ..++|++.++ ++||
T Consensus 284 ~IR~at--~~Dl~~I~~L~~~~~~~--~~~~----~~----~~~~l~~~~-------~~~~V~~~dg---------~iVG 335 (429)
T TIGR01890 284 SIRQAT--IDDIGGIAALIRPLEEQ--GILV----RR----SREYLEREI-------SEFSIIEHDG---------NIIG 335 (429)
T ss_pred heEECC--HHHHHHHHHHHHHHHHc--CCch----hh----hHHHHHhhc-------CcEEEEEECC---------EEEE
Confidence 799998 99999999998755432 1111 11 111121111 1267777776 9999
Q ss_pred EEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcEEEEEEEcCCHHHHHHHHhCCCE
Q 024161 161 VVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEYLVLRAYEDDYGARRLYSNAGYR 240 (271)
Q Consensus 161 ~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y~k~GF~ 240 (271)
++.+.... ....++|..++|+|+|||+|+|++|+++++++|+++|++.+.+.. .| +.+||+|+||+
T Consensus 336 ~~~~~~~~----------~~~~~~I~~l~V~p~~Rg~GiG~~Ll~~l~~~A~~~G~~~l~v~~--~~--a~~fY~k~GF~ 401 (429)
T TIGR01890 336 CAALYPYA----------EEDCGEMACLAVSPEYQDGGRGERLLAHIEDRARQMGISRLFVLT--TR--TGHWFRERGFQ 401 (429)
T ss_pred EEEEEecC----------CCCeEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEee--cc--hHHHHHHCCCE
Confidence 99887521 124567999999999999999999999999999999999886542 33 67999999999
Q ss_pred Eeecc
Q 024161 241 VVSSD 245 (271)
Q Consensus 241 ~~~~~ 245 (271)
.++..
T Consensus 402 ~~g~~ 406 (429)
T TIGR01890 402 TASVD 406 (429)
T ss_pred ECChh
Confidence 99873
No 43
>PF13508 Acetyltransf_7: Acetyltransferase (GNAT) domain; PDB: 3EY5_A 3FRM_B 3D8P_B 3GY9_A 3GYA_A 3S6F_A 2Q7B_A 1CM0_B 1XEB_B 1Y7R_A ....
Probab=99.46 E-value=1.3e-12 Score=92.66 Aligned_cols=76 Identities=25% Similarity=0.376 Sum_probs=62.4
Q ss_pred eEEEEeeCCCCCCCCCCCcEEEEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcE
Q 024161 139 ACLVAEHSNPNDNIEPQRKLVGVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEY 218 (271)
Q Consensus 139 ~~~Va~~~~~~~~~~~~~~iVG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~ 218 (271)
.++++++++ ++||++.+... ++..+|..++|+|+|||+|||+.|++.+.+.+. .+.
T Consensus 4 ~~~~~~~~~---------~ivG~~~~~~~------------~~~~~i~~~~v~~~~rg~Gig~~ll~~~~~~~~---~~~ 59 (79)
T PF13508_consen 4 RFFVAEDDG---------EIVGFIRLWPN------------EDFAYIGYLAVDPEYRGKGIGSKLLNYLLEKAK---SKK 59 (79)
T ss_dssp EEEEEEETT---------EEEEEEEEEET------------TTEEEEEEEEE-GGGTTSSHHHHHHHHHHHHHT---CSE
T ss_pred EEEEEEECC---------EEEEEEEEEEc------------CCEEEEEEEEECHHHcCCCHHHHHHHHHHHHcC---CCc
Confidence 467888776 99999999632 247789999999999999999999999988883 355
Q ss_pred EEEEEEcCCHHHHHHHHhCCCEE
Q 024161 219 LVLRAYEDDYGARRLYSNAGYRV 241 (271)
Q Consensus 219 i~l~v~~~N~~A~~~Y~k~GF~~ 241 (271)
+.+.+ |+.+.+||+|+||++
T Consensus 60 i~l~~---~~~~~~fY~~~GF~~ 79 (79)
T PF13508_consen 60 IFLFT---NPAAIKFYEKLGFEE 79 (79)
T ss_dssp EEEEE---EHHHHHHHHHTTEEE
T ss_pred EEEEE---cHHHHHHHHHCcCCC
Confidence 77765 567999999999985
No 44
>COG3153 Predicted acetyltransferase [General function prediction only]
Probab=99.46 E-value=3.9e-12 Score=102.63 Aligned_cols=151 Identities=21% Similarity=0.214 Sum_probs=109.9
Q ss_pred eEEEEccCCcccHHHHHHHHHHhccCCccccchhhHHhhHHHHHHHHHHHHhcC-CCCcceEEEEeeCCCCCCCCCCCcE
Q 024161 80 WKVRKLVRVGEEMREVAFIQAEAFHNPVALFNDVFFEFFKAEVLSGLLYKLRNS-PPDRYACLVAEHSNPNDNIEPQRKL 158 (271)
Q Consensus 80 ~~IR~at~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~Va~~~~~~~~~~~~~~i 158 (271)
+.||.-+ +.|++.|.++..++|... ....+.++++.. .+.....+||++++ +|
T Consensus 4 ~~ir~e~--~~d~~~i~~~~~~aF~~~---------------~e~~~v~~lR~~~~~~~~LslVA~d~g---------~v 57 (171)
T COG3153 4 MLIRTET--PADIPAIEALTREAFGPG---------------REAKLVDKLREGGRPDLTLSLVAEDDG---------EV 57 (171)
T ss_pred cEEEecC--hhhHHHHHHHHHHHhhcc---------------hHHHHHHHHHhcCCcccceeEEEeeCC---------EE
Confidence 5789997 999999999999999721 111222333331 12345688999887 99
Q ss_pred EEEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcEEEEEEEcCCHHHHHHHHhCC
Q 024161 159 VGVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEYLVLRAYEDDYGARRLYSNAG 238 (271)
Q Consensus 159 VG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y~k~G 238 (271)
||.+.++...-. .....-.-+.-++|+|+|||||||++|+...++.++..|+..+.+.=.+ .+|.|+|
T Consensus 58 vG~Il~s~v~~~------g~~~~~~~LaPLaV~p~~qg~GIG~~Lvr~~le~a~~~G~~~v~vlGdp------~YY~rfG 125 (171)
T COG3153 58 VGHILFSPVTVG------GEELGWLGLAPLAVDPEYQGQGIGSALVREGLEALRLAGASAVVVLGDP------TYYSRFG 125 (171)
T ss_pred EEEEEEeEEEec------CcccceEEEEeEEEchhhcCCcHHHHHHHHHHHHHHHCCCCEEEEecCc------ccccccC
Confidence 999998864321 1122445588899999999999999999999999999999988887433 5999999
Q ss_pred CEEeeccCCccccccCccceEEEEEecCCCCC
Q 024161 239 YRVVSSDLPWFSTWIGRKRRVLMIKRSDHNLL 270 (271)
Q Consensus 239 F~~~~~~~~~~~~~~~~~~~~~m~K~l~~~~~ 270 (271)
|+......-+. .+. .+...+|.+.|....+
T Consensus 126 F~~~~~~~l~~-p~~-~~~~~fl~~~L~~~~l 155 (171)
T COG3153 126 FEPAAGAKLYA-PGP-VPDERFLALELGDGAL 155 (171)
T ss_pred cEEcccccccc-CCC-CCCceEEEEEccCCcc
Confidence 99998854433 111 4467788888866543
No 45
>TIGR03448 mycothiol_MshD mycothiol biosynthesis acetyltransferase. Members of this family are MshD, the acetyltransferase that catalyzes the final step of mycothiol biosynthesis in various members of the Actinomyctes, Mycothiol replaces glutathione in these species.
Probab=99.45 E-value=1.8e-12 Score=114.47 Aligned_cols=121 Identities=26% Similarity=0.197 Sum_probs=85.6
Q ss_pred CcccHHHHHHHHHHhccCCcc-ccchhhHHhhHHHHHHHHHHHHhcCCCCcceEEEEeeCCCCCCCCCCCcEEEEEEEEe
Q 024161 88 VGEEMREVAFIQAEAFHNPVA-LFNDVFFEFFKAEVLSGLLYKLRNSPPDRYACLVAEHSNPNDNIEPQRKLVGVVDVTV 166 (271)
Q Consensus 88 ~~~D~~~i~~l~~~~f~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Va~~~~~~~~~~~~~~iVG~~~l~~ 166 (271)
+++|+++|.+++..++..+.. .+. .+... .+..........+++..++ ++||++.+..
T Consensus 7 ~~~d~~~v~~L~~~~~~~~~~~~~~--------~~~~~----~~~~~~~~~~~~~~~~~~~---------~~vG~~~~~~ 65 (292)
T TIGR03448 7 DADLRRDVRELLAAATAVDGVAPVS--------EQVLR----GLREPGAGHTRHLVAVDSD---------PIVGYANLVP 65 (292)
T ss_pred CHHHHHHHHHHHHHHHhcCCCCCCC--------HHHHh----hccccCCCCceEEEEEECC---------EEEEEEEEEc
Confidence 389999999999877643211 111 11111 2211111122366777665 8999999874
Q ss_pred ecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcEEEEEEEcCCHHHHHHHHhCCCEEeec
Q 024161 167 LRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEYLVLRAYEDDYGARRLYSNAGYRVVSS 244 (271)
Q Consensus 167 ~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y~k~GF~~~~~ 244 (271)
... ...++..++|+|+|||+|||++|++++++.+. ..+.+.+...|..|++||+++||+....
T Consensus 66 ~~~-----------~~~~~~~l~V~p~~rg~GiG~~Ll~~~~~~~~----~~~~~~~~~~n~~a~~fy~~~Gf~~~~~ 128 (292)
T TIGR03448 66 ARG-----------TDPAMAELVVHPAHRRRGIGRALIRALLAKGG----GRLRVWAHGDLPAARALASRLGLVPTRE 128 (292)
T ss_pred CCC-----------CcceEEEEEECHhhcCCCHHHHHHHHHHHhcc----CceEEEEcCCCHHHHHHHHHCCCEEccE
Confidence 211 12358899999999999999999999998764 4588888899999999999999998766
No 46
>PRK01346 hypothetical protein; Provisional
Probab=99.39 E-value=7.1e-12 Score=116.00 Aligned_cols=135 Identities=19% Similarity=0.124 Sum_probs=96.0
Q ss_pred CCeEEEEccCCcccHHHHHHHHHHhccCCccccchhhHHhhHHHHHHHHHHHHhcCCCCcceEEEEeeCCCCCCCCCCCc
Q 024161 78 YGWKVRKLVRVGEEMREVAFIQAEAFHNPVALFNDVFFEFFKAEVLSGLLYKLRNSPPDRYACLVAEHSNPNDNIEPQRK 157 (271)
Q Consensus 78 ~~~~IR~at~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Va~~~~~~~~~~~~~~ 157 (271)
.+++||+++ .+|++++.++...+|.... ... ..+.+.... . .. .+++++.++ +
T Consensus 5 ~~~~iR~~~--~~D~~~i~~L~~~~f~~~~--~~~---------~~~~~~~~~---~-~~-~~~va~~~~---------~ 57 (411)
T PRK01346 5 MAITIRTAT--EEDWPAWFRAAATGFGDSP--SDE---------ELEAWRALV---E-PD-RTLGAFDGD---------E 57 (411)
T ss_pred CCceeecCC--HHHHHHHHHHHHHHcCCCC--ChH---------HHHHHHHhc---C-cC-CeEEEEECC---------E
Confidence 468899998 9999999999999886422 110 111111111 1 12 267777765 8
Q ss_pred EEEEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcEEEEEEEcCCHHHHHHHHhC
Q 024161 158 LVGVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEYLVLRAYEDDYGARRLYSNA 237 (271)
Q Consensus 158 iVG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y~k~ 237 (271)
+||++.+........+ ...-+..+|..++|+|+|||+|||++||+++++.+++.|+..+.|.+.. .+||+|+
T Consensus 58 lvg~~~~~~~~~~~~~---~~~~~~~~i~~v~V~P~~RgrGig~~Ll~~~l~~a~~~g~~~~~L~~~~-----~~~Y~r~ 129 (411)
T PRK01346 58 VVGTAGAFDLRLTVPG---GAVLPAAGVTAVTVAPTHRRRGLLTALMREQLRRIRERGEPVAALTASE-----GGIYGRF 129 (411)
T ss_pred EEEEEEEeccccccCC---CCccceeEEEEEEEChhhcCCCHHHHHHHHHHHHHHHCCCcEEEEECCc-----hhhHhhC
Confidence 9999987642210000 1112567899999999999999999999999999999999888887543 3799999
Q ss_pred CCEEeeccCC
Q 024161 238 GYRVVSSDLP 247 (271)
Q Consensus 238 GF~~~~~~~~ 247 (271)
||+.......
T Consensus 130 Gf~~~~~~~~ 139 (411)
T PRK01346 130 GYGPATYSQS 139 (411)
T ss_pred CCeeccceEE
Confidence 9998877433
No 47
>KOG3235 consensus Subunit of the major N alpha-acetyltransferase [General function prediction only]
Probab=99.37 E-value=1.5e-12 Score=101.49 Aligned_cols=97 Identities=27% Similarity=0.368 Sum_probs=81.4
Q ss_pred eEEEEeeCCCCCCCCCCCcEEEEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHH-cCCc
Q 024161 139 ACLVAEHSNPNDNIEPQRKLVGVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVL-WGFE 217 (271)
Q Consensus 139 ~~~Va~~~~~~~~~~~~~~iVG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~-~g~~ 217 (271)
..+||++.+ |+|||++......++.. ..+...|..++|...||+.|||++||........+ .+.+
T Consensus 42 lSyVA~D~~--------gkiVGYvlAkmee~p~~------~~~hGhItSlaV~rs~RrlGla~kLm~qa~rAm~E~~~A~ 107 (193)
T KOG3235|consen 42 LSYVAEDEN--------GKIVGYVLAKMEEDPDD------EPPHGHITSLAVKRSYRRLGLAQKLMNQASRAMVEVYEAK 107 (193)
T ss_pred ceEEEEcCC--------CcEEEEeeeehhhcccC------CCCCCeeEEeeehhhHHHhhHHHHHHHHHHHHHHHhhcce
Confidence 478999765 69999998886543221 12345699999999999999999999997766654 5789
Q ss_pred EEEEEEEcCCHHHHHHHH-hCCCEEeeccCCcc
Q 024161 218 YLVLRAYEDDYGARRLYS-NAGYRVVSSDLPWF 249 (271)
Q Consensus 218 ~i~l~v~~~N~~A~~~Y~-k~GF~~~~~~~~~~ 249 (271)
++.|+|-.+|.+|+.+|+ .+||++....+.|+
T Consensus 108 yvsLHVR~SNraAl~LY~~tl~F~v~eve~kYY 140 (193)
T KOG3235|consen 108 YVSLHVRKSNRAALHLYKNTLGFVVCEVEPKYY 140 (193)
T ss_pred EEEEeeecccHHHHHhhhhccceEEeecccccc
Confidence 999999999999999999 89999999999988
No 48
>PRK13688 hypothetical protein; Provisional
Probab=99.33 E-value=1.1e-11 Score=99.45 Aligned_cols=88 Identities=10% Similarity=0.171 Sum_probs=62.0
Q ss_pred EEEEeeCCCCCCCCCCCcEEEEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcEE
Q 024161 140 CLVAEHSNPNDNIEPQRKLVGVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEYL 219 (271)
Q Consensus 140 ~~Va~~~~~~~~~~~~~~iVG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i 219 (271)
++++..++ ++||++.+..... .....+.....+++|..++|+|+|||+|||++|++.+ .+.++.
T Consensus 47 ~~~~~~~~---------~~VG~~~l~~~dg-~~~~~~~~~~~~~~L~~l~V~p~~rgkGiG~~Ll~~a----~~~~~~-- 110 (156)
T PRK13688 47 FYGIYYGD---------SLVARMSLYKKGG-VEEPYFEDTQDYLELWKLEVLPKYQNRGYGEMLVDFA----KSFQLP-- 110 (156)
T ss_pred EEEEEECC---------EEEEEEEEEecCC-cccccccCCCCeEEEEEEEECHHHcCCCHHHHHHHHH----HHhCCe--
Confidence 56666665 8999988753211 1110112335678899999999999999999999854 444544
Q ss_pred EEEEEcCCHHHHHHHHhCCCEEeecc
Q 024161 220 VLRAYEDDYGARRLYSNAGYRVVSSD 245 (271)
Q Consensus 220 ~l~v~~~N~~A~~~Y~k~GF~~~~~~ 245 (271)
+.+...|. |++||+|+||+.++..
T Consensus 111 -~~~~~~~~-a~~FY~k~GF~~~~~~ 134 (156)
T PRK13688 111 -IKTIARNK-SKDFWLKLGFTPVEYK 134 (156)
T ss_pred -EEEEeccc-hHHHHHhCCCEEeEEe
Confidence 34445564 8899999999999875
No 49
>PF08445 FR47: FR47-like protein; InterPro: IPR013653 Proteins in this entry have a conserved region similar to the C-terminal region of the Drosophila melanogaster (Fruit fly) hypothetical protein FR47 (Q9VR51 from SWISSPROT). This protein has been found to consist of two N-acyltransferase-like domains swapped with the C-terminal strands. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups; PDB: 1SQH_A 3EC4_B.
Probab=99.32 E-value=1.1e-11 Score=89.69 Aligned_cols=60 Identities=25% Similarity=0.325 Sum_probs=53.1
Q ss_pred EEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcEEEEEEEcCCHHHHHHHHhCCCEEeec
Q 024161 184 YISGLAVSKRFRRQKIATALMKACEVLAVLWGFEYLVLRAYEDDYGARRLYSNAGYRVVSS 244 (271)
Q Consensus 184 yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y~k~GF~~~~~ 244 (271)
.|..++|+|+|||||+|+.|+.++.+.+.+.|.. ..+.+..+|.+|++||+|+||+...+
T Consensus 23 ~i~~v~t~p~~RrrGlg~~lv~~l~~~~~~~g~~-~~l~v~~~N~~s~~ly~klGf~~~~~ 82 (86)
T PF08445_consen 23 EIGGVYTLPEHRRRGLGSALVAALARELLERGKT-PFLYVDADNEASIRLYEKLGFREIEE 82 (86)
T ss_dssp CEEEEEE-GGGTTSSHHHHHHHHHHHHHHHTTSE-EEEEEETT-HHHHHHHHHCT-EEEEE
T ss_pred EEEEEEECHHHcCCCHHHHHHHHHHHHHHhCCCc-EEEEEECCCHHHHHHHHHcCCEEEEE
Confidence 4999999999999999999999999999998876 67999999999999999999999865
No 50
>KOG2488 consensus Acetyltransferase (GNAT) domain-containing protein [General function prediction only]
Probab=99.32 E-value=2.6e-11 Score=97.56 Aligned_cols=93 Identities=20% Similarity=0.270 Sum_probs=81.1
Q ss_pred eEEEEeeCCCCCCCCCCCcEEEEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcE
Q 024161 139 ACLVAEHSNPNDNIEPQRKLVGVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEY 218 (271)
Q Consensus 139 ~~~Va~~~~~~~~~~~~~~iVG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~ 218 (271)
.++++.... +++||+....+.. ..+.++.|+.-+=|.++|||+|||+.||+.+...+..+..++
T Consensus 93 ~Yi~a~~~~--------~~~vgf~~Frf~v--------d~g~~vlYcyEvqv~~~yR~kGiGk~LL~~l~~~a~~~~~~k 156 (202)
T KOG2488|consen 93 RYICAWNNK--------SKLVGFTMFRFTV--------DTGDPVLYCYEVQVASAYRGKGIGKFLLDTLEKLADSRHMRK 156 (202)
T ss_pred eEEEEEcCC--------CceeeEEEEEEEc--------ccCCeEEEEEEEeehhhhhccChHHHHHHHHHHHHHHHHhhh
Confidence 356666554 3899999998753 334578999999999999999999999999999999999999
Q ss_pred EEEEEEcCCHHHHHHHHhCCCEEeeccCC
Q 024161 219 LVLRAYEDDYGARRLYSNAGYRVVSSDLP 247 (271)
Q Consensus 219 i~l~v~~~N~~A~~~Y~k~GF~~~~~~~~ 247 (271)
|.|+|..+|.+|++||+++||......|.
T Consensus 157 VmLTVf~~N~~al~Fy~~~gf~~~~~sp~ 185 (202)
T KOG2488|consen 157 VMLTVFSENIRALGFYHRLGFVVDEESPC 185 (202)
T ss_pred heeeeecccchhHHHHHHcCcccCCCCCc
Confidence 99999999999999999999999887654
No 51
>cd02169 Citrate_lyase_ligase Citrate lyase ligase. Citrate lyase ligase, also known as [Citrate (pro-3S)-lyase] ligase, is responsible for acetylation of the (2-(5''-phosphoribosyl)-3'-dephosphocoenzyme-A) prosthetic group of the gamma subunit of citrate lyase, converting the inactive thiol form of this enzyme to the active form. The acetylation of 1 molecule of deacetyl-citrate lyase to enzymatically active citrate lyase requires 6 molecules of ATP. The Adenylylyltranferase activity of the enzyme involves the formation of AMP and and pyrophosphate in the acetylation reaction.
Probab=99.30 E-value=2.1e-11 Score=107.60 Aligned_cols=80 Identities=13% Similarity=0.231 Sum_probs=68.7
Q ss_pred ceEEEEeeCCCCCCCCCCCcEEEEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCc
Q 024161 138 YACLVAEHSNPNDNIEPQRKLVGVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFE 217 (271)
Q Consensus 138 ~~~~Va~~~~~~~~~~~~~~iVG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~ 217 (271)
+.++++++++ ++||++.+.. . +|..++|+|+|||+|+|++|++++++.+++.|++
T Consensus 6 ~~~~v~~~~~---------~iVG~~~l~~--------------~--~I~~vaV~p~~Rg~GiG~~Ll~~l~~~a~~~g~~ 60 (297)
T cd02169 6 YTVGIFDDAG---------ELIATGSIAG--------------N--VLKCVAVCPKYQGEGLALKIVSELINKAYEEGIF 60 (297)
T ss_pred EEEEEEEECC---------EEEEEEEecc--------------C--EEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCC
Confidence 4577777665 9999997752 1 3889999999999999999999999999999999
Q ss_pred EEEEEEEcCCHHHHHHHHhCCCEEeecc
Q 024161 218 YLVLRAYEDDYGARRLYSNAGYRVVSSD 245 (271)
Q Consensus 218 ~i~l~v~~~N~~A~~~Y~k~GF~~~~~~ 245 (271)
.+.|.+... +.+||+|+||+..+..
T Consensus 61 ~i~L~t~~~---~~~fYek~GF~~~~~~ 85 (297)
T cd02169 61 HLFLFTKPK---NAKFFRGLGFKELANA 85 (297)
T ss_pred EEEEEEccc---HHHHHHHCCCEEeccc
Confidence 999998665 5799999999999843
No 52
>KOG3138 consensus Predicted N-acetyltransferase [General function prediction only]
Probab=99.25 E-value=2.8e-11 Score=98.77 Aligned_cols=142 Identities=18% Similarity=0.267 Sum_probs=98.9
Q ss_pred eEEEEccCCcccHHHHHHHHHHhccCCccccchhhHHhhHHHHHHHHHHHHhcCCCCcceEEEEeeCCCCCCCCCCCcEE
Q 024161 80 WKVRKLVRVGEEMREVAFIQAEAFHNPVALFNDVFFEFFKAEVLSGLLYKLRNSPPDRYACLVAEHSNPNDNIEPQRKLV 159 (271)
Q Consensus 80 ~~IR~at~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Va~~~~~~~~~~~~~~iV 159 (271)
+.+|..+ +.|+.++..+....|... .- +. ++.+ .+.. ..+.-+.+..+ ..|
T Consensus 17 ~~l~~it--~~nl~~~~~l~~~~fP~~--y~-~k--------fy~~---~~~~---~~~~~~A~~~~----------~~v 67 (187)
T KOG3138|consen 17 IELRLIT--PNNLKQLKQLNEDIFPIS--YV-DK--------FYPD---VLSN---GDLTQLAYYNE----------IAV 67 (187)
T ss_pred eeeccCC--cchHHHHHHHhccccCcc--hH-HH--------HHHH---HHhc---CCHHHhhhhcc----------ccc
Confidence 6789998 999999999988877531 11 11 1111 1111 11112222323 355
Q ss_pred EEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcC-CcEEEEEEEcCCHHHHHHHHhCC
Q 024161 160 GVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWG-FEYLVLRAYEDDYGARRLYSNAG 238 (271)
Q Consensus 160 G~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g-~~~i~l~v~~~N~~A~~~Y~k~G 238 (271)
|...+.............. .+..||..++|.|.||.+|||+.|++.+.+.+.... ++.+++++-..|..|+.||++.|
T Consensus 68 ~a~~~k~~~~~~~~~r~~~-~~~~yi~~Lgvl~~yR~~gIGs~Ll~~~~~~~~~~~~~~~v~lHv~~~n~~ai~~Y~~~g 146 (187)
T KOG3138|consen 68 GAVACKLIKFVQNAKRLFG-NRVIYILSLGVLPRYRNKGIGSKLLEFVKKYCSEAHQCRRVYLHVQAVNESAIEFYEKRG 146 (187)
T ss_pred cceeeeehhhhhhhhhhhc-cceeEEEeecccHHHHhcchHHHHHHHHHHHHhcccccceEEEEEEeCCCcHHHHHHhcC
Confidence 5555543221111101000 126889999999999999999999999999999887 99999999999999999999999
Q ss_pred CEEeeccCCcccc
Q 024161 239 YRVVSSDLPWFST 251 (271)
Q Consensus 239 F~~~~~~~~~~~~ 251 (271)
|+.+...+.|++.
T Consensus 147 F~~~~~~~~~y~~ 159 (187)
T KOG3138|consen 147 FEIVERLKNYYSI 159 (187)
T ss_pred ceEeecccccccc
Confidence 9999999998843
No 53
>TIGR00124 cit_ly_ligase [citrate (pro-3S)-lyase] ligase. ATP is cleaved to AMP and pyrophosphate during the reaction. The carboxyl end is homologous to a number of cytidyltransferases that also release pyrophosphate.
Probab=99.16 E-value=7.7e-10 Score=99.15 Aligned_cols=81 Identities=17% Similarity=0.260 Sum_probs=69.7
Q ss_pred eEEEEeeCCCCCCCCCCCcEEEEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcE
Q 024161 139 ACLVAEHSNPNDNIEPQRKLVGVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEY 218 (271)
Q Consensus 139 ~~~Va~~~~~~~~~~~~~~iVG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~ 218 (271)
.+++++.++ +|||++.+.. . .|..++|+|+|||+|+|+.|+.++++.+++.|+..
T Consensus 32 ~~vv~~~~~---------~lVg~g~l~g--------------~--~ik~vaV~~~~rG~Glg~~L~~~L~~~a~~~G~~~ 86 (332)
T TIGR00124 32 IFIAVYEDE---------EIIGCGGIAG--------------N--VIKCVAIDESLRGEGLALQLMTELENLAYELGRFH 86 (332)
T ss_pred EEEEEEECC---------EEEEEEEEec--------------C--EEEEEEEcHHHcCCCHHHHHHHHHHHHHHHcCCCE
Confidence 466677665 9999999852 1 38899999999999999999999999999999999
Q ss_pred EEEEEEcCCHHHHHHHHhCCCEEeeccCC
Q 024161 219 LVLRAYEDDYGARRLYSNAGYRVVSSDLP 247 (271)
Q Consensus 219 i~l~v~~~N~~A~~~Y~k~GF~~~~~~~~ 247 (271)
+.+.+.+.| .+||+++||......+.
T Consensus 87 l~l~Tk~~~---~~fy~klGF~~i~~~~~ 112 (332)
T TIGR00124 87 LFIFTKPEY---AALFEYCGFKTLAEAKD 112 (332)
T ss_pred EEEEECchH---HHHHHHcCCEEeeeecc
Confidence 999987664 58999999999998554
No 54
>KOG3397 consensus Acetyltransferases [General function prediction only]
Probab=99.14 E-value=8e-10 Score=87.63 Aligned_cols=138 Identities=17% Similarity=0.138 Sum_probs=96.3
Q ss_pred cCCCeEEEEccCCcccHHHHHHHHHHhccCCccccchhhHHhhHHHHHHHHHHHHhcCCCCcceEEEEeeCCCCCCCCCC
Q 024161 76 SEYGWKVRKLVRVGEEMREVAFIQAEAFHNPVALFNDVFFEFFKAEVLSGLLYKLRNSPPDRYACLVAEHSNPNDNIEPQ 155 (271)
Q Consensus 76 ~~~~~~IR~at~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Va~~~~~~~~~~~~ 155 (271)
....+.+.++.+-++-+++-+++++..|.- .+. . ..+.+.... + ..=.+++...++ .
T Consensus 9 S~~~l~~vPiH~rPELlk~~~~LIN~eWPR----S~T-----s---R~hSL~~Sc---D-s~P~sL~Ll~E~-------~ 65 (225)
T KOG3397|consen 9 SMPDLFFVPLHDRPELLKESMTLINSEWPR----SDT-----S---REHSLKKSC---D-SPPMSLLLLNEE-------N 65 (225)
T ss_pred CCCcceeEeccccHHHHHHHHHHHhccCCc----cch-----h---hhhhhhccc---C-CCCeeeeeeccc-------c
Confidence 345678888874456666667777665532 110 0 111111111 1 111355554433 2
Q ss_pred CcEEEEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcEEEEEEEcCCHHHHHHHH
Q 024161 156 RKLVGVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEYLVLRAYEDDYGARRLYS 235 (271)
Q Consensus 156 ~~iVG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y~ 235 (271)
..|||-..++.. ......++++.+.|++++||+|+|+.||+.++.+++..|++.++|.+..+ .+||+
T Consensus 66 ~~VigH~rLS~i---------~n~~~al~VEsVVV~k~~RG~GFGk~lMk~~E~~~R~~gf~~~yLsT~DQ----~~FYe 132 (225)
T KOG3397|consen 66 DEVLGHSRLSHL---------PNRDHALWVESVVVKKDQRGLGFGKFLMKSTEKWMREKGFNEAYLSTDDQ----CRFYE 132 (225)
T ss_pred cceeeeeccccC---------CCCCceeEEEEEEEehhhccccHHHHHHHHHHHHHHHhhhhheeeecccc----hhhhh
Confidence 489999988852 22346678999999999999999999999999999999999999999876 57999
Q ss_pred hCCCEEeeccCCcc
Q 024161 236 NAGYRVVSSDLPWF 249 (271)
Q Consensus 236 k~GF~~~~~~~~~~ 249 (271)
++||+...-+.+|.
T Consensus 133 ~lGYe~c~Pi~~~~ 146 (225)
T KOG3397|consen 133 SLGYEKCDPIVHST 146 (225)
T ss_pred hhcccccCceeccc
Confidence 99999988876665
No 55
>COG3393 Predicted acetyltransferase [General function prediction only]
Probab=99.14 E-value=6.8e-10 Score=94.23 Aligned_cols=76 Identities=25% Similarity=0.333 Sum_probs=66.3
Q ss_pred cEEEEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcEEEEEEEcCCHHHHHHHHh
Q 024161 157 KLVGVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEYLVLRAYEDDYGARRLYSN 236 (271)
Q Consensus 157 ~iVG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y~k 236 (271)
+||..+...-. ...+.-|.+++|+|+|||||+|+.|+..+.+...+.|.. -.|.+...|+.|.++|+|
T Consensus 187 ~iVa~A~t~a~-----------~~~~~~I~gV~T~peyR~kGyAt~lva~L~~~lL~eGk~-~~L~~~~~N~~A~~iY~r 254 (268)
T COG3393 187 KIVAKAETAAE-----------NPAYAQINGVYTHPEYRGKGYATALVATLAAKLLAEGKI-PCLFVNSDNPVARRIYQR 254 (268)
T ss_pred cEEEeeecccc-----------CCcceEEEEEEcCHHHccccHHHHHHHHHHHHHHhCCCe-eEEEEecCCHHHHHHHHH
Confidence 89999987732 235667999999999999999999999999999999965 556667899999999999
Q ss_pred CCCEEeec
Q 024161 237 AGYRVVSS 244 (271)
Q Consensus 237 ~GF~~~~~ 244 (271)
.||+..++
T Consensus 255 iGF~~~g~ 262 (268)
T COG3393 255 IGFREIGE 262 (268)
T ss_pred hCCeecce
Confidence 99999987
No 56
>COG1670 RimL Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis]
Probab=99.14 E-value=3.1e-09 Score=86.42 Aligned_cols=85 Identities=18% Similarity=0.237 Sum_probs=70.4
Q ss_pred CcEEEEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHH-cCCcEEEEEEEcCCHHHHHHH
Q 024161 156 RKLVGVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVL-WGFEYLVLRAYEDDYGARRLY 234 (271)
Q Consensus 156 ~~iVG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~-~g~~~i~l~v~~~N~~A~~~Y 234 (271)
+++||.+.+..... ....-....+..+.|+|+|+|+|++.+..+++++.+ .++.++.+.|.+.|.+|++++
T Consensus 77 ~~~iG~~~~~~~~~--------~~~~~~~~ig~~l~~~~~g~G~~tea~~~~l~~~f~~~~l~ri~~~~~~~N~~S~rv~ 148 (187)
T COG1670 77 GELIGVIGLSDIDR--------AANGDLAEIGYWLDPEYWGKGYATEALRALLDYAFEELGLHRIEATVDPENEASIRVY 148 (187)
T ss_pred CeEEEEEEEEEecc--------ccccceEEEEEEEChHHhcCchHHHHHHHHHHHhhhhcCceEEEEEecCCCHHHHHHH
Confidence 38999999985331 001112255777799999999999999999999976 899999999999999999999
Q ss_pred HhCCCEEeeccCCc
Q 024161 235 SNAGYRVVSSDLPW 248 (271)
Q Consensus 235 ~k~GF~~~~~~~~~ 248 (271)
+|+||+..+.....
T Consensus 149 ek~Gf~~eg~~~~~ 162 (187)
T COG1670 149 EKLGFRLEGELRQH 162 (187)
T ss_pred HHcCChhhhhhhhc
Confidence 99999999986654
No 57
>KOG3234 consensus Acetyltransferase, (GNAT) family [General function prediction only]
Probab=99.07 E-value=6e-10 Score=87.04 Aligned_cols=111 Identities=21% Similarity=0.217 Sum_probs=87.5
Q ss_pred EEEEeeCCCCCCCCCCCcEEEEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcEE
Q 024161 140 CLVAEHSNPNDNIEPQRKLVGVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEYL 219 (271)
Q Consensus 140 ~~Va~~~~~~~~~~~~~~iVG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i 219 (271)
|++++..+ ++|-|++.-.... ....-+.++..+.|.|+||+.|+|+.||..+++.....+.-.+
T Consensus 43 ~~~a~~p~--------~~imgyimgk~Eg--------~~~~wh~HvTAltVap~~Rrl~la~~lm~~led~~d~~~a~fv 106 (173)
T KOG3234|consen 43 FIVAEAPT--------GEIMGYIMGKVEG--------KDTEWHGHVTALTVAPDYRRLGLAAKLMDTLEDVSDVDNAYFV 106 (173)
T ss_pred hEeccCCC--------CceEEEEeeeccc--------cCcceeeEEEEEEechhHHHHHHHHHHHHHHHHHHHhhhhhee
Confidence 67777543 5899999876432 1223446689999999999999999999999999988877789
Q ss_pred EEEEEcCCHHHHHHHHhCCCEEeeccCCccccccCccceEEEEEecCC
Q 024161 220 VLRAYEDDYGARRLYSNAGYRVVSSDLPWFSTWIGRKRRVLMIKRSDH 267 (271)
Q Consensus 220 ~l~v~~~N~~A~~~Y~k~GF~~~~~~~~~~~~~~~~~~~~~m~K~l~~ 267 (271)
.|-|-..|+-|+.+|+++||.+..++..|+.. -.+...+=|.|.|+-
T Consensus 107 DLfVr~sN~iAI~mYkkLGY~~YR~Vi~YY~~-g~deda~dMRKalSr 153 (173)
T KOG3234|consen 107 DLFVRVSNQIAIDMYKKLGYSVYRTVIEYYSV-GPDEDAYDMRKALSR 153 (173)
T ss_pred eeeeeccchhHHHHHHhcCceEEEeeeeeecc-CCCcchHhhhhhhcc
Confidence 99999999999999999999999999999832 123334456666543
No 58
>TIGR01211 ELP3 histone acetyltransferase, ELP3 family. The Saccharomyces cerevisiae member YPL086C has been characterized in vitro as an N-terminal acetyltransferase for all four core histones. It is a component of the RNA polymerase II holoenzyme, designated Elp3p for Elongator Protein 3. Members of this family are found in eukaryotes and archaea. These proteins are part of the larger set of GNAT acetyltransferases.
Probab=98.97 E-value=7.1e-09 Score=97.99 Aligned_cols=84 Identities=15% Similarity=0.287 Sum_probs=64.5
Q ss_pred CCcEEEEEEEEeecCCcccccccCCCCeEEEEEEE-----------ECCCccCccHHHHHHHHHHHHHHHcCCcEEEEEE
Q 024161 155 QRKLVGVVDVTVLRDDPVLQHLRGAEEYLYISGLA-----------VSKRFRRQKIATALMKACEVLAVLWGFEYLVLRA 223 (271)
Q Consensus 155 ~~~iVG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~-----------V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v 223 (271)
.+.+||++++......... ....+.+.|..+. ++|+|||+|+|++||++++++|++.|++.+.+.
T Consensus 422 ~~~l~G~lrlr~~~~~~~~---~~~~~~a~IrelhV~G~~~~~~~~~~~~~rg~GiG~~Ll~~ae~~Ar~~G~~~i~v~- 497 (522)
T TIGR01211 422 NDILIGFLRLRFPSEPAHR---KEVDATALVRELHVYGSEVPIGERGDDEWQHRGYGRRLLEEAERIAAEEGSEKILVI- 497 (522)
T ss_pred CCeEEEEEEEecCcccccc---cccCCCceEEEEEEeeeeccccccCChhHhCcCHHHHHHHHHHHHHHHCCCCEEEEe-
Confidence 3589999999975432211 1112234455544 359999999999999999999999999999985
Q ss_pred EcCCHHHHHHHHhCCCEEeec
Q 024161 224 YEDDYGARRLYSNAGYRVVSS 244 (271)
Q Consensus 224 ~~~N~~A~~~Y~k~GF~~~~~ 244 (271)
.|..|++||+|+||+..+.
T Consensus 498 --s~~~A~~FY~klGf~~~g~ 516 (522)
T TIGR01211 498 --SGIGVREYYRKLGYELDGP 516 (522)
T ss_pred --eCchHHHHHHHCCCEEEcc
Confidence 4788999999999998776
No 59
>COG3981 Predicted acetyltransferase [General function prediction only]
Probab=98.95 E-value=1.7e-08 Score=80.44 Aligned_cols=83 Identities=18% Similarity=0.245 Sum_probs=70.3
Q ss_pred CcEEEEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcEEEEEEEcCCHHHHHHHH
Q 024161 156 RKLVGVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEYLVLRAYEDDYGARRLYS 235 (271)
Q Consensus 156 ~~iVG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y~ 235 (271)
+++||++.++..-..... ..+++ -+..|.|..||+|+|++||+.+++.|++.|++++.++|..+|.+|.+.-+
T Consensus 78 ~~ivG~i~lRh~Ln~~ll---~~gGH----IGY~VrPseR~KGYA~emLkl~L~~ar~lgi~~Vlvtcd~dN~ASrkvI~ 150 (174)
T COG3981 78 GQIVGFINLRHQLNDFLL---EEGGH----IGYSVRPSERRKGYAKEMLKLALEKARELGIKKVLVTCDKDNIASRKVIE 150 (174)
T ss_pred CcEEEEEEeeeecchHHH---hcCCc----ccceeChhhhccCHHHHHHHHHHHHHHHcCCCeEEEEeCCCCchhhHHHH
Confidence 399999999865433332 22332 36679999999999999999999999999999999999999999999999
Q ss_pred hCCCEEeecc
Q 024161 236 NAGYRVVSSD 245 (271)
Q Consensus 236 k~GF~~~~~~ 245 (271)
++|=..+.+.
T Consensus 151 ~NGGile~~~ 160 (174)
T COG3981 151 ANGGILENEF 160 (174)
T ss_pred hcCCEEeEEE
Confidence 9998888773
No 60
>PF08444 Gly_acyl_tr_C: Aralkyl acyl-CoA:amino acid N-acyltransferase, C-terminal region; InterPro: IPR013652 This entry represents mammalian-specific glycine N-acyltransferase (also called aralkyl acyl-CoA:amino acid N-acyltransferase; 2.3.1.13 from EC). Mitochondrial acyltransferases catalyse the transfer of an acyl group from acyl-CoA to the N terminus of glycine to produce N-acylglycine. These enzymes can conjugate a multitude of substrates to form a variety of N-acylglycines. The CoA derivatives of a number of aliphatic and aromatic acids, but not phenylacetyl-CoA or (indol-3-yl)acetyl-CoA, can act as donor [, ].
Probab=98.80 E-value=1.9e-08 Score=72.02 Aligned_cols=74 Identities=15% Similarity=0.111 Sum_probs=66.6
Q ss_pred CCcEEEEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcEEEEEEEcCCHHHHHHH
Q 024161 155 QRKLVGVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEYLVLRAYEDDYGARRLY 234 (271)
Q Consensus 155 ~~~iVG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y 234 (271)
+|++|.++..+ .+..+-..++.|+|||||+.+.++......+.+.|+. ++..|.++|+.++++.
T Consensus 7 eG~PVSW~lmd---------------qtge~rmgyTlPeyR~~G~~~~v~~~~~~~L~~~g~P-~Y~hv~~~N~~~~r~~ 70 (89)
T PF08444_consen 7 EGNPVSWSLMD---------------QTGEMRMGYTLPEYRGQGLMSQVMYHLAQYLHKLGFP-FYGHVDEDNEASQRLS 70 (89)
T ss_pred CCCEeEEEEec---------------ccccccccccCHhHhcCCHHHHHHHHHHHHHHHCCCC-eEeehHhccHHHHHHH
Confidence 46899999888 2233778889999999999999999999999999998 9999999999999999
Q ss_pred HhCCCEEeec
Q 024161 235 SNAGYRVVSS 244 (271)
Q Consensus 235 ~k~GF~~~~~ 244 (271)
+++||....-
T Consensus 71 ~~lg~~~~pc 80 (89)
T PF08444_consen 71 KSLGFIFMPC 80 (89)
T ss_pred HHCCCeecCC
Confidence 9999998765
No 61
>COG2153 ElaA Predicted acyltransferase [General function prediction only]
Probab=98.77 E-value=5.1e-08 Score=75.43 Aligned_cols=94 Identities=20% Similarity=0.126 Sum_probs=71.6
Q ss_pred CcEEEEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHc-CCcEEEEEEEcCCHHHHHHH
Q 024161 156 RKLVGVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLW-GFEYLVLRAYEDDYGARRLY 234 (271)
Q Consensus 156 ~~iVG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~-g~~~i~l~v~~~N~~A~~~Y 234 (271)
+++|+++.+-+... ...-.-|..+.|.|++||+|+|++||..+++.+.+. .-+.+++.+-+. .+.||
T Consensus 59 g~LvAyaRLl~~~~---------~~~~~~iGRV~v~~~~RG~glG~~Lm~~AL~~~~~~~p~~~v~l~AQah---Lq~fY 126 (155)
T COG2153 59 GELVAYARLLPPGA---------EYEEVSIGRVIVSPAARGQGLGQQLMEKALETAGREWPDKPVYLGAQAH---LQDFY 126 (155)
T ss_pred CeEEEEEecCCCCC---------CcCceeeeeEEECHhhhccchhHHHHHHHHHHHHhhCCCCCeEEehHHH---HHHHH
Confidence 48999998885321 112245999999999999999999999999999864 356688886655 89999
Q ss_pred HhCCCEEeeccCCccccccCccceEEEEEecC
Q 024161 235 SNAGYRVVSSDLPWFSTWIGRKRRVLMIKRSD 266 (271)
Q Consensus 235 ~k~GF~~~~~~~~~~~~~~~~~~~~~m~K~l~ 266 (271)
.++||..+++. | .-++-+++-|..+..
T Consensus 127 a~~GFv~~~e~--y---ledGIpHv~M~r~~~ 153 (155)
T COG2153 127 ASFGFVRVGEE--Y---LEDGIPHVGMIREVI 153 (155)
T ss_pred HHhCcEEcCch--h---hcCCCCchhhhhccc
Confidence 99999999982 2 234456777766554
No 62
>PF13718 GNAT_acetyltr_2: GNAT acetyltransferase 2; PDB: 2ZPA_B.
Probab=98.74 E-value=8.4e-07 Score=73.36 Aligned_cols=121 Identities=14% Similarity=0.120 Sum_probs=72.1
Q ss_pred CcceEEEEeeCCCCCCCCCCCcEEEEEEEEeecCCc--------ccc-ccc-----------------CCCCeEEEEEEE
Q 024161 136 DRYACLVAEHSNPNDNIEPQRKLVGVVDVTVLRDDP--------VLQ-HLR-----------------GAEEYLYISGLA 189 (271)
Q Consensus 136 ~~~~~~Va~~~~~~~~~~~~~~iVG~~~l~~~~~~~--------~~~-~~~-----------------~~~~~~yi~~l~ 189 (271)
+....|+...++ +.+|+|.+.+.....-+ .+. ++. ..-..+.|..++
T Consensus 25 P~h~l~~l~~~~-------~p~il~~~~v~~EG~l~~~l~~~i~~g~rRp~G~LiP~~L~~~~~~~~f~~l~g~RIvRIA 97 (196)
T PF13718_consen 25 PNHRLFVLLQPG-------DPDILGVAQVALEGGLSKELIEAILSGGRRPKGHLIPQTLAQHFGDPEFAQLSGARIVRIA 97 (196)
T ss_dssp TTEEEEEEE-SS---------SEEEEEEEEEEE---HHHHHHHHTTS---SS-HHHHHHHHHSS-TTGGGSEEEEEEEEE
T ss_pred CcceeehhccCC-------CceEEEEEEEEecCCCCHHHHHHHHhCCCCCCCCCHHHHHHHHhCCHHHHhhcceeEEEEE
Confidence 455677777654 23899999988755321 000 000 023457799999
Q ss_pred ECCCccCccHHHHHHHHHHHHH-------------------------HHcCCcEEEEEEEcCCHHHHHHHHhCCCEEeec
Q 024161 190 VSKRFRRQKIATALMKACEVLA-------------------------VLWGFEYLVLRAYEDDYGARRLYSNAGYRVVSS 244 (271)
Q Consensus 190 V~p~~RGkGiGs~Ll~~~~~~a-------------------------~~~g~~~i~l~v~~~N~~A~~~Y~k~GF~~~~~ 244 (271)
|+|++|++|+|++|++.+.+++ +..+++++-..- --++.-.+|+.|+||..+..
T Consensus 98 vhP~~q~~G~Gs~lL~~l~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~vDylGtSF-G~t~~Ll~FW~k~gf~pv~l 176 (196)
T PF13718_consen 98 VHPDLQRMGYGSRLLQQLEQYAEGKIPSLSEQDKEKLPPLLSKLSDRRPPGVDYLGTSF-GATPELLKFWQKNGFVPVYL 176 (196)
T ss_dssp E-CCC-SSSHHHHHHHHHHHT-----------------------------S-SEEEEEE-E--HHHHHHHHCTT-EEEEE
T ss_pred EChhhhcCCHHHHHHHHHHHHHhhhcccccccccccccccccccccccccCCCEEEecc-CCCHHHHHHHHHCCcEEEEE
Confidence 9999999999999999999999 467888776554 34577999999999999876
Q ss_pred cCCccccccCccceEEEEEecC
Q 024161 245 DLPWFSTWIGRKRRVLMIKRSD 266 (271)
Q Consensus 245 ~~~~~~~~~~~~~~~~m~K~l~ 266 (271)
-..- ....+....+|.|.|+
T Consensus 177 ~~~~--n~~SGe~S~imlr~ls 196 (196)
T PF13718_consen 177 GQTR--NEASGEHSAIMLRPLS 196 (196)
T ss_dssp -SS----TTT---EEEEEEE--
T ss_pred ecCc--ccccCceeeeEEeecC
Confidence 3322 2334456788888774
No 63
>cd04301 NAT_SF N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate. NAT (N-Acyltransferase) is a large superfamily of enzymes that mostly catalyze the transfer of an acyl group to a substrate and are implicated in a variety of functions, ranging from bacterial antibiotic resistance to circadian rhythms in mammals. Members include GCN5-related N-Acetyltransferases (GNAT) such as Aminoglycoside N-acetyltransferases, Histone N-acetyltransferase (HAT) enzymes, and Serotonin N-acetyltransferase, which catalyze the transfer of an acetyl group to a substrate. The kinetic mechanism of most GNATs involves the ordered formation of a ternary complex: the reaction begins with Acetyl Coenzyme A (AcCoA) binding, followed by binding of substrate, then direct transfer of the acetyl group from AcCoA to the substrate, followed by product and subsequent CoA release. Other family members include Arginine/ornithine N-succinyltransfera
Probab=98.67 E-value=1.8e-07 Score=61.53 Aligned_cols=56 Identities=30% Similarity=0.382 Sum_probs=48.7
Q ss_pred cEEEEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcEEEE
Q 024161 157 KLVGVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEYLVL 221 (271)
Q Consensus 157 ~iVG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l 221 (271)
+++|++.+..... ..+.+++..++|+|+|||+|+|+.|+..+++++.+.|++.+.+
T Consensus 9 ~~ig~~~~~~~~~---------~~~~~~l~~~~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~ 64 (65)
T cd04301 9 EIVGFASLSPDGS---------GGDTAYIGDLAVLPEYRGKGIGSALLEAAEEEARERGAKRLRL 64 (65)
T ss_pred EEEEEEEEEecCC---------CCccEEEEEEEECHHHcCcCHHHHHHHHHHHHHHHcCCcEEEe
Confidence 8999999986321 2366789999999999999999999999999999999998876
No 64
>COG3818 Predicted acetyltransferase, GNAT superfamily [General function prediction only]
Probab=98.52 E-value=5.8e-07 Score=68.28 Aligned_cols=69 Identities=22% Similarity=0.329 Sum_probs=63.3
Q ss_pred cCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcEEEEEEEc--CCHHHHHHHHhCCCEEeecc
Q 024161 177 RGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEYLVLRAYE--DDYGARRLYSNAGYRVVSSD 245 (271)
Q Consensus 177 ~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~--~N~~A~~~Y~k~GF~~~~~~ 245 (271)
.+-+.+.|+..+.|....||+|+|++|.+.+.+.|+..|+.++..+|.. .|+++-.|...+||..+++.
T Consensus 79 ErYe~F~YvDRvVVA~~aRGrG~aRalY~Dlf~~Ae~agy~~~tCEVn~DppnpasdaFHaalGF~eVG~a 149 (167)
T COG3818 79 ERYENFFYVDRVVVASRARGRGVARALYADLFSYAELAGYPYLTCEVNLDPPNPASDAFHAALGFHEVGQA 149 (167)
T ss_pred hhCCceEEEEEEEEEecccccchHHHHHHHHHHHHHhcCCceEEEEecCCCCChHHHHHhhhcCceEccce
Confidence 3456899999999999999999999999999999999999998888865 79999999999999999983
No 65
>PF12746 GNAT_acetyltran: GNAT acetyltransferase; PDB: 3G3S_B.
Probab=98.38 E-value=6.2e-06 Score=71.57 Aligned_cols=86 Identities=13% Similarity=0.093 Sum_probs=62.3
Q ss_pred EEEEeeCCCCCCCCCCCcEEEEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcEE
Q 024161 140 CLVAEHSNPNDNIEPQRKLVGVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEYL 219 (271)
Q Consensus 140 ~~Va~~~~~~~~~~~~~~iVG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i 219 (271)
-+++..++ +||+.|.-.... .+. .--.+.++|+|||||+|+.+..+++..|.++|+.-.
T Consensus 167 Gf~i~~~~---------~iVs~~~s~~~~-----------~~~-~EI~I~T~~~yR~kGLA~~~aa~~I~~Cl~~~l~P~ 225 (265)
T PF12746_consen 167 GFCILHDG---------EIVSGCSSYFVY-----------ENG-IEIDIETHPEYRGKGLATAVAAAFILECLENGLYPS 225 (265)
T ss_dssp EEEEEETT---------EEEEEEEEEEEE-----------TTE-EEEEEEE-CCCTTSSHHHHHHHHHHHHHHHTT-EEE
T ss_pred EEEEEECC---------EEEEEEEEEEEE-----------CCE-EEEEEEECHHhhcCCHHHHHHHHHHHHHHHCCCCcC
Confidence 45666665 888766554422 122 245899999999999999999999999999997643
Q ss_pred EEEEEcCCHHHHHHHHhCCCEEeeccCCcc
Q 024161 220 VLRAYEDDYGARRLYSNAGYRVVSSDLPWF 249 (271)
Q Consensus 220 ~l~v~~~N~~A~~~Y~k~GF~~~~~~~~~~ 249 (271)
.++ .|.+|+++=+|+||+.....+-|.
T Consensus 226 -WDc--~N~~S~~lA~kLGf~~~~~Y~~Y~ 252 (265)
T PF12746_consen 226 -WDC--HNLASIALAEKLGFHFDFEYTAYE 252 (265)
T ss_dssp --EE--SSHHHHHHHHHCT--EEEEEEEE-
T ss_pred -eeC--CCHHHHHHHHHcCCcccceeeeee
Confidence 334 699999999999999999966654
No 66
>KOG4135 consensus Predicted phosphoglucosamine acetyltransferase [Carbohydrate transport and metabolism]
Probab=98.35 E-value=9.4e-06 Score=63.11 Aligned_cols=111 Identities=14% Similarity=0.092 Sum_probs=78.7
Q ss_pred CCCcceEEEEeeCCCCCCCCCCCcEEEEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHH
Q 024161 134 PPDRYACLVAEHSNPNDNIEPQRKLVGVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVL 213 (271)
Q Consensus 134 ~~~~~~~~Va~~~~~~~~~~~~~~iVG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~ 213 (271)
+.+...++|............-...||-+-+....++.... +...-....+.-+--.|.-||+|+|++.+.+.+.++..
T Consensus 60 DeDKlTFIVLdaE~~ea~~~ev~~MvGDvNlFlt~~~~~~n-~s~~~~~gE~EvMIAEP~~RgKG~G~eav~~ml~y~~s 138 (185)
T KOG4135|consen 60 DEDKLTFIVLDAEMNEAGEDEVDHMVGDVNLFLTTSPDTEN-PSDDVITGEVEVMIAEPRGRGKGIGTEAVRAMLAYAYS 138 (185)
T ss_pred CCcceEEEEEechhcccCchhHhhhccceeeEEecCCCcCC-cccceeeeeEEEEEecccccCCCccHHHHHHHHHHHHH
Confidence 44555566653221111111123578888887766544321 11122345577888899999999999999999999974
Q ss_pred -cCCcEEEEEEEcCCHHHHHHHHhCCCEEeecc
Q 024161 214 -WGFEYLVLRAYEDDYGARRLYSNAGYRVVSSD 245 (271)
Q Consensus 214 -~g~~~i~l~v~~~N~~A~~~Y~k~GF~~~~~~ 245 (271)
.++.+..+.+..+|.++++||+|++|..+...
T Consensus 139 ~l~l~Ky~vkig~~nk~sl~lFkk~~f~q~~~n 171 (185)
T KOG4135|consen 139 VLKLDKYEVKIGMDNKPSLRLFKKFLFTQVFYN 171 (185)
T ss_pred HhhhheEEEEecCCCchHHHHHHHhhheeeeee
Confidence 68899999999999999999999999998873
No 67
>PF12568 DUF3749: Acetyltransferase (GNAT) domain; InterPro: IPR024612 This domain is found in uncharacterised proteins from Gammaproteobacteria, and is approximately 40 amino acids in length. It contains two completely conserved residues (D and I) that may be functionally important. Proteins having this domain are frequently annotated as acetyltransferases of the GNAT family; however there is little accompanying annotation to confirm this.; PDB: 2K5T_A.
Probab=98.34 E-value=1.6e-05 Score=60.77 Aligned_cols=85 Identities=19% Similarity=0.192 Sum_probs=60.0
Q ss_pred cceEEEEeeCCCCCCCCCCCcEEEEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCC
Q 024161 137 RYACLVAEHSNPNDNIEPQRKLVGVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGF 216 (271)
Q Consensus 137 ~~~~~Va~~~~~~~~~~~~~~iVG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~ 216 (271)
....|+|.-++ +++|.+.+... +..+.|..++|++.-||+|+|+.|++.+.+.+ -++
T Consensus 37 ~~~l~aArFNd---------RlLgAv~v~~~------------~~~~~L~~l~VRevTRrRGVG~yLlee~~rq~--p~i 93 (128)
T PF12568_consen 37 GHRLFAARFND---------RLLGAVKVTIS------------GQQAELSDLCVREVTRRRGVGLYLLEEVLRQL--PDI 93 (128)
T ss_dssp SEEEEEEEETT---------EEEEEEEEEEE------------TTEEEEEEEEE-TT-SSSSHHHHHHHHHHHHS---S-
T ss_pred CCeEEEEEech---------heeeeEEEEEc------------CcceEEeeEEEeeccccccHHHHHHHHHHHHC--CCC
Confidence 44588888887 99999999964 25667999999999999999999999998887 456
Q ss_pred cEEEEEEEc---CC-HHHHHHHHhCCCEEeec
Q 024161 217 EYLVLRAYE---DD-YGARRLYSNAGYRVVSS 244 (271)
Q Consensus 217 ~~i~l~v~~---~N-~~A~~~Y~k~GF~~~~~ 244 (271)
..+++.... .+ .....|...+||...+.
T Consensus 94 ~~w~l~~~~~~~~~~~~~~~Fm~a~GF~~~~~ 125 (128)
T PF12568_consen 94 KHWWLADEGVEPQDRAVMAAFMQACGFSAQSD 125 (128)
T ss_dssp -EEEE--TT-S--THHHHHHHHHHHT-EE-SS
T ss_pred cEEEEecCCCcccchHHHHHHHHHcCccccCC
Confidence 777777553 22 34558999999965543
No 68
>COG1444 Predicted P-loop ATPase fused to an acetyltransferase [General function prediction only]
Probab=98.28 E-value=1.6e-05 Score=77.49 Aligned_cols=83 Identities=16% Similarity=0.129 Sum_probs=66.1
Q ss_pred CeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcEEEEEEEcCCHHHHHHHHhCCCEEeeccCCccccccCccceEE
Q 024161 181 EYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEYLVLRAYEDDYGARRLYSNAGYRVVSSDLPWFSTWIGRKRRVL 260 (271)
Q Consensus 181 ~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y~k~GF~~~~~~~~~~~~~~~~~~~~~ 260 (271)
.-+-|..++|+|++|++|||++|++.+.++|+ .|++.+-.. .-.++.-.+|+.|+||..+..-+..- -..+....+
T Consensus 530 ~G~RIvRIAvhPe~q~~GiGsrlL~~l~~~a~-~~~Dwlgvs-FG~t~~L~rFW~rnGF~pVhls~~rn--~~SGeys~i 605 (758)
T COG1444 530 VGWRIVRIAVHPELQRMGIGSRLLALLIEEAR-KGLDWLGVS-FGYTEELLRFWLRNGFVPVHLSPTRN--ASSGEYTAI 605 (758)
T ss_pred ceeeEEEEEeCHHHHhcCHHHHHHHHHHHHHh-cCCCEEeec-cCCCHHHHHHHHHcCeEEEEecCccC--cCCCceeEE
Confidence 34679999999999999999999999999997 567755544 44567899999999999998876654 233445778
Q ss_pred EEEecCC
Q 024161 261 MIKRSDH 267 (271)
Q Consensus 261 m~K~l~~ 267 (271)
|.|.|+.
T Consensus 606 ~lkpLs~ 612 (758)
T COG1444 606 VLKPLSD 612 (758)
T ss_pred EEecCCH
Confidence 8888764
No 69
>PF14542 Acetyltransf_CG: GCN5-related N-acetyl-transferase; PDB: 2H5M_A 2Q44_A 1XMT_A 2Q4Y_A 2IL4_A 2EVN_A 1R57_A.
Probab=98.22 E-value=3.8e-05 Score=54.20 Aligned_cols=64 Identities=17% Similarity=0.115 Sum_probs=49.2
Q ss_pred cEEEEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcEEEEEEEcCCHHHHHHHHh
Q 024161 157 KLVGVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEYLVLRAYEDDYGARRLYSN 236 (271)
Q Consensus 157 ~iVG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y~k 236 (271)
+.+|.+.+... ++.+.|....|.|++||||+|+.|++.++++|+++|.+ |.. .-+-+.++++|
T Consensus 9 ~~~a~l~Y~~~------------~~~~~i~hT~V~~~~rGqGia~~L~~~~l~~a~~~~~k-v~p----~C~y~~~~~~~ 71 (78)
T PF14542_consen 9 EEIAELTYRED------------GGVIVITHTEVPPELRGQGIAKKLVEAALDYARENGLK-VVP----TCSYVAKYFRR 71 (78)
T ss_dssp TEEEEEEEEES------------SSEEEEEEEEE-CSSSTTTHHHHHHHHHHHHHHHTT-E-EEE----TSHHHHHHHHH
T ss_pred EEEEEEEEEeC------------CCEEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCE-EEE----ECHHHHHHHHh
Confidence 79999998741 46777999999999999999999999999999999976 332 23446666666
Q ss_pred C
Q 024161 237 A 237 (271)
Q Consensus 237 ~ 237 (271)
+
T Consensus 72 h 72 (78)
T PF14542_consen 72 H 72 (78)
T ss_dssp -
T ss_pred C
Confidence 4
No 70
>KOG4144 consensus Arylalkylamine N-acetyltransferase [General function prediction only]
Probab=98.22 E-value=1.1e-06 Score=68.58 Aligned_cols=148 Identities=14% Similarity=0.116 Sum_probs=91.5
Q ss_pred cCCCeEEEEccCCcccHHHHHHHHHHhccCCccccchhhHHhhHHHHHHHHHHHHhcCCCCcceEEEE-eeCCCCCCCCC
Q 024161 76 SEYGWKVRKLVRVGEEMREVAFIQAEAFHNPVALFNDVFFEFFKAEVLSGLLYKLRNSPPDRYACLVA-EHSNPNDNIEP 154 (271)
Q Consensus 76 ~~~~~~IR~at~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Va-~~~~~~~~~~~ 154 (271)
.|.-..||+.- ++|..++..+-+..|.+++. ...+-+..++.+ .+.....+.+ +...-.. -
T Consensus 8 ~p~~~~irp~i--~e~~q~~~~Lea~~FPe~er------------asfeii~~r~i~-~pevc~glf~~~~h~~~~---~ 69 (190)
T KOG4144|consen 8 KPEAPRIRPGI--PESCQRRHTLEASEFPEDER------------ASFEIIRERFIS-VPEVCPGLFDEIRHFLTL---C 69 (190)
T ss_pred CcccccCCCCC--hHHHHHHhccccccCChhHH------------HHHHHHHHHHhc-chhhcchhhhhHHhhhhh---c
Confidence 45556789997 99999998887777743211 122233334333 1111111111 1110000 0
Q ss_pred CCcEEEEEEEEeecCCc-----ccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcC-CcEEEEEEEcCCH
Q 024161 155 QRKLVGVVDVTVLRDDP-----VLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWG-FEYLVLRAYEDDY 228 (271)
Q Consensus 155 ~~~iVG~~~l~~~~~~~-----~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g-~~~i~l~v~~~N~ 228 (271)
++.+||.+.-+....+. ..+ ....+....|+.++|+|+||.+|.|..|+..-++..-++. .+++.|.+.+.
T Consensus 70 ~~tLIghIigs~~~~E~lt~ESm~k-h~s~g~ni~iHsl~Ihpa~rk~g~a~~Ll~~ylq~l~~q~i~~r~~Li~h~p-- 146 (190)
T KOG4144|consen 70 EGTLIGHIIGSLWDKERLTQESMTK-HRSGGHNIHIHSLAIHPAFRKQGRAPILLWRYLQHLGSQPIVRRAALICHDP-- 146 (190)
T ss_pred cccceehhhcccCcchhhhHHHHhh-hhcCCcceeEEEEEecHHHHhcCcchhHHHHHHHHhhcCccccceeeeecCC--
Confidence 23788888766544331 111 1223455789999999999999999999999877776543 35677776555
Q ss_pred HHHHHHHhCCCEEeecc
Q 024161 229 GARRLYSNAGYRVVSSD 245 (271)
Q Consensus 229 ~A~~~Y~k~GF~~~~~~ 245 (271)
-++||+|+||+.++..
T Consensus 147 -LvPFYEr~gFk~vgp~ 162 (190)
T KOG4144|consen 147 -LVPFYERFGFKAVGPC 162 (190)
T ss_pred -ccchhHhcCceeeccc
Confidence 8899999999999884
No 71
>PF13480 Acetyltransf_6: Acetyltransferase (GNAT) domain
Probab=98.00 E-value=0.00027 Score=54.65 Aligned_cols=116 Identities=14% Similarity=0.116 Sum_probs=83.8
Q ss_pred CeEEEEccCCcccHHHHHHHHHHhccCC-ccccchhhHHhhHHHHHHHHHHHHhcCCCCcceEEEEeeCCCCCCCCCCCc
Q 024161 79 GWKVRKLVRVGEEMREVAFIQAEAFHNP-VALFNDVFFEFFKAEVLSGLLYKLRNSPPDRYACLVAEHSNPNDNIEPQRK 157 (271)
Q Consensus 79 ~~~IR~at~~~~D~~~i~~l~~~~f~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Va~~~~~~~~~~~~~~ 157 (271)
+++++.++ +++|++.+.+++.+.+... ...... ...+..+.+...+.. ......+++..++ +
T Consensus 19 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~~~~--~~~~~l~~~~~~g---------~ 81 (142)
T PF13480_consen 19 GVRFEVAT-DPADLEAFYELYRESWARRHGGFAPP-----FSRDFFRDLLRSLAE--SGRLRLFVLYDGG---------E 81 (142)
T ss_pred CEEEEEeC-CHHHHHHHHHHHHHHHhhhhCCCCCc-----chHHHHHHHHHhhcc--CCCEEEEEEEECC---------E
Confidence 57888776 6889999999988776543 111111 223344555555422 2345567777776 8
Q ss_pred EEEEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcEEEEEE
Q 024161 158 LVGVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEYLVLRA 223 (271)
Q Consensus 158 iVG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v 223 (271)
+||+...... .+..+.+..+++|+++..++|..|+..++++|.+.|++.+.+..
T Consensus 82 ~va~~~~~~~------------~~~~~~~~~g~~~~~~~~~~~~~l~~~~i~~a~~~g~~~~d~g~ 135 (142)
T PF13480_consen 82 PVAFALGFRH------------GGTLYYWYGGYDPEYRKYSPGRLLLWEAIRWAIERGLRYFDFGG 135 (142)
T ss_pred EEEEEEEEEE------------CCEEEEEEEEECHhhHhCCHHHHHHHHHHHHHHHCCCCEEEECC
Confidence 9988876642 35677889999999999999999999999999999999888764
No 72
>COG4552 Eis Predicted acetyltransferase involved in intracellular survival and related acetyltransferases [General function prediction only]
Probab=97.99 E-value=9.8e-06 Score=71.65 Aligned_cols=87 Identities=21% Similarity=0.160 Sum_probs=66.6
Q ss_pred EEEEeeCCCCCCCCCCCcEEEEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcEE
Q 024161 140 CLVAEHSNPNDNIEPQRKLVGVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEYL 219 (271)
Q Consensus 140 ~~Va~~~~~~~~~~~~~~iVG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i 219 (271)
.+|...+. ++++.....+..-....... +..+|.++++.|+|||+|..++|+.+.++...+.|+.-.
T Consensus 41 ~~vi~~nq---------kl~s~L~i~~f~~~f~~q~l----~t~GIa~Vas~P~~R~~G~~~~Ll~~sLre~~~kG~p~s 107 (389)
T COG4552 41 SYVIYMNQ---------KLASRLHIPPFIFWFGNQVL----PTAGIAGVASAPTYRRRGALRALLAHSLREIARKGYPVS 107 (389)
T ss_pred ceEEeehh---------hhhhcccccchheeeCCeee----eccceEEEEechhhccCcHHHHHHHHHHHHHHHcCCeeE
Confidence 45666554 78887776643322222222 344599999999999999999999999999999999877
Q ss_pred EEEEEcCCHHHHHHHHhCCCEEeec
Q 024161 220 VLRAYEDDYGARRLYSNAGYRVVSS 244 (271)
Q Consensus 220 ~l~v~~~N~~A~~~Y~k~GF~~~~~ 244 (271)
.|+- .+.+||+|.||+..+.
T Consensus 108 ~L~P-----~s~~iYrKfGye~asn 127 (389)
T COG4552 108 ALHP-----FSGGIYRKFGYEYASN 127 (389)
T ss_pred Eecc-----CchhhHhhccccccce
Confidence 7763 3669999999998776
No 73
>COG3375 Uncharacterized conserved protein [Function unknown]
Probab=97.96 E-value=0.00029 Score=58.67 Aligned_cols=143 Identities=20% Similarity=0.153 Sum_probs=99.5
Q ss_pred CeEEEEccCCcccHHHHHHHHHHhccCCccccchhhHHhhHHHHHHHHHHHHhcCCCCcceEEEEeeCCCCCCCCCCCcE
Q 024161 79 GWKVRKLVRVGEEMREVAFIQAEAFHNPVALFNDVFFEFFKAEVLSGLLYKLRNSPPDRYACLVAEHSNPNDNIEPQRKL 158 (271)
Q Consensus 79 ~~~IR~at~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Va~~~~~~~~~~~~~~i 158 (271)
++.||.++ ++++++++.+++..+|....- +.. ..+....++. ..-.++-|..++ +++
T Consensus 2 ~vvvrrl~-dp~el~~~~dV~~~aWg~~d~--~~~---------~~d~i~al~~---~GGlvlgAf~~d--------g~l 58 (266)
T COG3375 2 KVVVRRLT-DPAELDEAEDVQASAWGSEDR--DGA---------PADTIRALRY---HGGLVLGAFSAD--------GRL 58 (266)
T ss_pred ceeEEecC-CHHHHHHHHHHHHHHhCcccc--ccc---------hHHHHHHHHh---cCCeEEEEEcCC--------CcE
Confidence 46789999 899999999999999975211 111 1112223322 122355566654 489
Q ss_pred EEEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcEEEEEEEcCCHHHHHH-HHhC
Q 024161 159 VGVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEYLVLRAYEDDYGARRL-YSNA 237 (271)
Q Consensus 159 VG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~-Y~k~ 237 (271)
||...-.+. .....-+.|-+.++|.|++|+.|+|-+|-..=-+++.++|+..+..+-.+-|.-..+| ..|+
T Consensus 59 VGls~G~pg--------~r~g~~y~ySH~~gV~e~~k~sglg~aLK~~Qre~a~~~G~tli~WTfDPl~alNA~fNi~KL 130 (266)
T COG3375 59 VGLSYGYPG--------GRGGSLYLYSHMLGVREEVKGSGLGVALKMKQRERALSMGYTLIAWTFDPLNALNARFNISKL 130 (266)
T ss_pred EEEEeccCC--------cCCCceeeeeeehhccccccccchhhhhHHHHHHHHHhcCeeeEEEecccchhhhhhcchhhh
Confidence 998876641 1222347888999999999999999999999999999999999998888877644443 4677
Q ss_pred CCEEeeccCCccccc
Q 024161 238 GYRVVSSDLPWFSTW 252 (271)
Q Consensus 238 GF~~~~~~~~~~~~~ 252 (271)
|-....-+++|+..+
T Consensus 131 Ga~artYi~nfYg~m 145 (266)
T COG3375 131 GAIARTYIKNFYGEM 145 (266)
T ss_pred ceeEEEeeccccchh
Confidence 766666667777444
No 74
>COG0454 WecD Histone acetyltransferase HPA2 and related acetyltransferases [Transcription / General function prediction only]
Probab=97.95 E-value=1.3e-05 Score=58.08 Aligned_cols=44 Identities=27% Similarity=0.343 Sum_probs=41.6
Q ss_pred EEECCCccCccHHHHHHHHHHHHHHHcCCcEEEEEEEcCCHHHHHHHHhCCC
Q 024161 188 LAVSKRFRRQKIATALMKACEVLAVLWGFEYLVLRAYEDDYGARRLYSNAGY 239 (271)
Q Consensus 188 l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y~k~GF 239 (271)
++|+|+|||+|||+.|++.++++++..|+. .|..+..+|+++||
T Consensus 87 l~v~~~~rg~Gig~~Ll~~~~~~~~~~g~~--------~~~~~~~~~~~~~~ 130 (156)
T COG0454 87 LYVLPEYRGKGIGSALLEAALEWARKRGIS--------LNRLALEVYEKNGF 130 (156)
T ss_pred EEecchhhccchHHHHHHHHHHHHHHcCce--------ehHHHHHHHHhcCC
Confidence 999999999999999999999999998876 67889999999999
No 75
>COG2388 Predicted acetyltransferase [General function prediction only]
Probab=97.79 E-value=9.1e-05 Score=54.47 Aligned_cols=63 Identities=21% Similarity=0.172 Sum_probs=50.8
Q ss_pred EEEEeeCCCCCCCCCCCcEEEEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcEE
Q 024161 140 CLVAEHSNPNDNIEPQRKLVGVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEYL 219 (271)
Q Consensus 140 ~~Va~~~~~~~~~~~~~~iVG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i 219 (271)
+++...++ ..+|.+...... .+...|..-+|.+++||||+|++|++.+++.|++.|.+-+
T Consensus 17 ~y~~~~~G---------~~~~e~~y~~~~-----------~~~i~i~HT~V~d~lrGqGia~~L~~~al~~ar~~g~kii 76 (99)
T COG2388 17 RYVLTDEG---------EVIGEATYYDRG-----------ENLIIIDHTYVPDELRGQGIAQKLVEKALEEAREAGLKII 76 (99)
T ss_pred EEEEecCC---------cEEEEEEEecCC-----------CCEEEEecCcCCHHHcCCcHHHHHHHHHHHHHHHcCCeEc
Confidence 56666665 788998877432 3566788999999999999999999999999999998655
Q ss_pred EEE
Q 024161 220 VLR 222 (271)
Q Consensus 220 ~l~ 222 (271)
=+.
T Consensus 77 P~C 79 (99)
T COG2388 77 PLC 79 (99)
T ss_pred ccc
Confidence 444
No 76
>TIGR03694 exosort_acyl putative PEP-CTERM/exosortase system-associated acyltransferase. Members of this protein family are restricted to bacterial species with the PEP-CTERM/exosortase system predicted to act in exopolysaccharide-associated protein targeting. PSI-BLAST and CDD reveal relationships to the acyltransferase family that includes N-acyl-L-homoserine lactone synthetase. Several members of this family may be found in a single genome. These proteins likely contribute to chemical modifications in exopolysaccharide and biofilm structural material production.
Probab=97.78 E-value=0.00067 Score=58.39 Aligned_cols=145 Identities=20% Similarity=0.203 Sum_probs=93.1
Q ss_pred CeEEEEccCCcccHHHHHHHHHHhccCCccccchhhHHhhHHHHHHHHHHHHhcCCCCcceEEEEeeCCCCCCCCCCCcE
Q 024161 79 GWKVRKLVRVGEEMREVAFIQAEAFHNPVALFNDVFFEFFKAEVLSGLLYKLRNSPPDRYACLVAEHSNPNDNIEPQRKL 158 (271)
Q Consensus 79 ~~~IR~at~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Va~~~~~~~~~~~~~~i 158 (271)
.+.|+.+. +.+++.++..+..++|....+|......+ ..+. ....+....++++...++ +++
T Consensus 7 ~~~v~~a~-~~~~~~~~~~lR~~VFv~e~gw~~~~~~~-------~~~E--~D~~D~~~~h~l~~~~~~--------g~v 68 (241)
T TIGR03694 7 YFEIIPAV-TPELLEEAFRLRYQVYCEELGFEPPSDYP-------DGLE--TDEYDAHSVHSLLRHRRT--------GTF 68 (241)
T ss_pred eEEEEEcC-CHHHHHHHHHHHHHHHHHhcCCCCCCCCC-------CCCc--CCCCCCCCcEEEEEECCC--------CCE
Confidence 36788887 67888999999999997644432110000 0000 001111222344443332 489
Q ss_pred EEEEEEEeecC-Cc--------c-cc-----ccc----CCCCeEEEEEEEECCCccCc--------c-------------
Q 024161 159 VGVVDVTVLRD-DP--------V-LQ-----HLR----GAEEYLYISGLAVSKRFRRQ--------K------------- 198 (271)
Q Consensus 159 VG~~~l~~~~~-~~--------~-~~-----~~~----~~~~~~yi~~l~V~p~~RGk--------G------------- 198 (271)
||++.+.+... .+ . .. ... .....+.+..++|+|++|++ |
T Consensus 69 vG~~RLl~t~~~~p~~~~p~e~~~~~~~~~~~~~~~~~~~~~i~E~SRf~V~~~~r~r~~~~~~~~~~~~~~~~~~~~~~ 148 (241)
T TIGR03694 69 VGCVRLVLPNSSDPDQPFPFEKHCSHSLDGLFLDPRRLPRSRIAEVSRLAVSKDFRRRKGEKLKPSGVGVIETEAPFSES 148 (241)
T ss_pred EEEEEEeccccccccccccHHHHhccccchhhcCccccCCCceEEeehheECHhHhCCcccccccccccccccccccchh
Confidence 99998876421 11 0 00 001 23578999999999999974 2
Q ss_pred -------HHHHHHHHHHHHHHHcCCcEEEEEEEcCCHHHHHHHHhCCCEEeec
Q 024161 199 -------IATALMKACEVLAVLWGFEYLVLRAYEDDYGARRLYSNAGYRVVSS 244 (271)
Q Consensus 199 -------iGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y~k~GF~~~~~ 244 (271)
+...|+..+.++|.+.|++.++..+.+. -.+++.++||.....
T Consensus 149 ~~~~~~~~~~~L~~~~~~~a~~~Gi~~~~~v~~~~---l~r~l~r~G~~~~~l 198 (241)
T TIGR03694 149 ERRRFPHIPLGLYLGLIALSSANGITHWYAIMEPR---LARLLSRFGIQFRQV 198 (241)
T ss_pred hcccCchHHHHHHHHHHHHHHHCCCcEEEEEeCHH---HHHHHHHhCCceEEc
Confidence 5678999999999999999998887654 778999999876433
No 77
>COG3053 CitC Citrate lyase synthetase [Energy production and conversion]
Probab=97.63 E-value=0.0013 Score=56.96 Aligned_cols=74 Identities=18% Similarity=0.220 Sum_probs=65.3
Q ss_pred CcEEEEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcEEEEEEEcCCHHHHHHHH
Q 024161 156 RKLVGVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEYLVLRAYEDDYGARRLYS 235 (271)
Q Consensus 156 ~~iVG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y~ 235 (271)
++||++..+.- .. |-+++|+|.+||-|+.-+|+..+++.+-++|...+.+.+-+. ...||+
T Consensus 46 ~~iiacGsiaG--------------nv--ikcvAvs~s~qGeGl~lkl~TeLin~ay~~g~~hLFiyTKp~---~~~lFk 106 (352)
T COG3053 46 EEIIACGSIAG--------------NV--IKCVAVSESLQGEGLALKLVTELINLAYERGRTHLFIYTKPE---YAALFK 106 (352)
T ss_pred CcEEEeccccc--------------ce--eEEEEechhcccccHHHHHHHHHHHHHHHcCCceEEEEechh---HHHHHH
Confidence 48999988872 22 899999999999999999999999999999999999997666 779999
Q ss_pred hCCCEEeeccCCc
Q 024161 236 NAGYRVVSSDLPW 248 (271)
Q Consensus 236 k~GF~~~~~~~~~ 248 (271)
.+||..+...++.
T Consensus 107 ~~GF~~i~~~~~~ 119 (352)
T COG3053 107 QCGFSEIASAENV 119 (352)
T ss_pred hCCceEeeccCce
Confidence 9999999887665
No 78
>PF00765 Autoind_synth: Autoinducer synthetase; InterPro: IPR001690 Bacterial species have many methods of controlling gene expression and cell growth. Regulation of gene expression in response to changes in cell density is termed quorum sensing [, ]. Quorum-sensing bacteria produce, release and respond to hormone-like molecules (autoinducers) that accumulate in the external environment as the cell population grows. Once a threshold of these molecules is reached, a signal transduction cascade is triggered that ultimately leads to behavioural changes in the bacterium []. Autoinducers are thus clearly important mediators of molecular communication. Conjugal transfer of Agrobacterium octopine-type Ti plasmids is activated by octopine, a metabolite released from plant tumours []. Octopine causes conjugal donors to secrete a pheromone, Agrobacterium autoinducer (AAI), and exogenous AAI further stimulates conjugation. The putative AAI synthase and an AAI-responsive transcriptional regulator have been found to be encoded by the Ti plasmid traI and traR genes, respectively. TraR and TraI are similar to the LuxR and LuxI regulatory proteins of Vibrio fischeri, and AAI is similar in structure to the diffusable V. fischeri autoinducer, the inducing ligand of LuxR. TraR activates target genes in the presence of AAI and also activates traR and traI themselves, creating two positive-feedback loops. TraR-AAI-mediated activation in wild-type Agrobacterium strains is enhanced by culturing on solid media, suggesting a possible role in cell density sensing []. Production of light by the marine bacterium V. fischeri and by recombinant hosts containing cloned lux genes is controlled by the density of the culture []. Density-dependent regulation of lux gene expression has been shown to require a locus consisting of the luxR and luxI genes. In these and other Gram-negative bacteria, N-(3-oxohexanoyl)-L-homoserine lactone (OHHL) acts as the autoinducer by binding to transcriptional regulatory proteins and activating them []. OHHL and related molecules, such as N-butanoyl- (BHL), N-hexanoyl- (HHL) and N-oxododecanoyl- (PAI) homoserine lactones, are produced by a family of proteins that share a high level of sequence similarity. Proteins which currently members of this family include: luxI from V. fischeri. ahyI and asaI from Aeromonas species, which synthesize BHL and whose targets are ahyR and asaR respectively. carI from Erwinia carotovora. The target of OHHL is carR which activates genes involved in the biosynthesis of carbapenem antibiotics. eagI from Enterobacter agglomerans. The target of OHHL is not yet known. esaI from Erwinia stewartii. expI from Erwinia carotovora. lasI from Pseudomonas aeruginosa, which synthesizes PAI and whose target is lasR which activates the transcription of the elastase gene. rhlI (or vsmI) from P. aeruginosa, which synthesizes BHL and HHL and whose target is rhlR. swrI from Serratia liquefaciens, which synthesizes BHL. yenI from Yersinia enterocolitica. ; GO: 0007165 signal transduction; PDB: 3P2H_A 3P2F_A 1KZF_A 1K4J_A 1RO5_A.
Probab=97.59 E-value=0.0011 Score=54.61 Aligned_cols=135 Identities=16% Similarity=0.157 Sum_probs=87.8
Q ss_pred cccHHHHHHHHHHhccCCccccchhhHHhhHHHHHHHHH-HHHhcCCCCcceEEEEeeCCCCCCCCCCCcEEEEEEEEee
Q 024161 89 GEEMREVAFIQAEAFHNPVALFNDVFFEFFKAEVLSGLL-YKLRNSPPDRYACLVAEHSNPNDNIEPQRKLVGVVDVTVL 167 (271)
Q Consensus 89 ~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~Va~~~~~~~~~~~~~~iVG~~~l~~~ 167 (271)
.++++++-.+..++|.+..+|.-.. .+.++ +.+ +...-.++++..++ +|+|++.+-+.
T Consensus 7 ~~~l~~~~rlR~~vFv~rlgW~v~~---------~dg~E~Dqy---D~~~~~ylv~~~~g---------~v~g~~RLlpt 65 (182)
T PF00765_consen 7 RRLLEEMFRLRHRVFVDRLGWDVPC---------EDGMEIDQY---DDPDAVYLVALDDG---------RVVGCARLLPT 65 (182)
T ss_dssp HHHHHHHHHHHHHHHTTCSCCCHHC---------CTSEE--TT---GCTT-EEEEEEETT---------EEEEEEEEEET
T ss_pred HHHHHHHHHHHHHHHHHhhCCCCcC---------CCCcEeeec---CCCCCeEEEEEECC---------EEEEEeeeccC
Confidence 6788889999999998755443110 00000 011 11222345556555 99999999876
Q ss_pred cCCccc----------ccccCCCCeEEEEEEEECCCccC------ccHHHHHHHHHHHHHHHcCCcEEEEEEEcCCHHHH
Q 024161 168 RDDPVL----------QHLRGAEEYLYISGLAVSKRFRR------QKIATALMKACEVLAVLWGFEYLVLRAYEDDYGAR 231 (271)
Q Consensus 168 ~~~~~~----------~~~~~~~~~~yi~~l~V~p~~RG------kGiGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~ 231 (271)
..+..+ ...+.....|.+..++|+++.++ .-+...|+..+.++|.++|++.+...+... -.
T Consensus 66 t~p~ML~~~F~~ll~~~~~p~~~~vwE~SRf~v~~~~~~~~~~~~~~~~~~L~~~~~e~a~~~gi~~~v~V~~~~---~~ 142 (182)
T PF00765_consen 66 TGPYMLSDVFPHLLPDGPAPRSPDVWELSRFCVDPDRRRSRAGSRSPVTMELLLGMVEFALSNGIRHIVGVVDPA---ME 142 (182)
T ss_dssp TS--HHHHCTGGGHTTS---SSTTEEEEEEEEE-HCCCHHCHSCC-THHHHHHHHHHHHHHCTT-SEEEEEEEHH---HH
T ss_pred CCcchhhhHHHHHhCCCCCCCCCcceeeeEEEEcccccccccccccHHHHHHHHHHHHHHHHCCCCEEEEEEChH---HH
Confidence 655211 11233468999999999998542 247789999999999999999998887644 88
Q ss_pred HHHHhCCCEEeeccCC
Q 024161 232 RLYSNAGYRVVSSDLP 247 (271)
Q Consensus 232 ~~Y~k~GF~~~~~~~~ 247 (271)
+++++.||...---++
T Consensus 143 r~l~r~G~~~~~lG~~ 158 (182)
T PF00765_consen 143 RILRRAGWPVRRLGPP 158 (182)
T ss_dssp HHHHHCT-EEEESSEE
T ss_pred HHHHHcCCceEECCCC
Confidence 9999999998766433
No 79
>PF06852 DUF1248: Protein of unknown function (DUF1248); InterPro: IPR009658 This entry represents a conserved region within a number of proteins of unknown function that seem to be specific to Caenorhabditis elegans. Note that some proteins in the entry contain more than one copy of this region.
Probab=97.51 E-value=0.0032 Score=51.48 Aligned_cols=87 Identities=9% Similarity=0.119 Sum_probs=56.0
Q ss_pred CCcEEEEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcEEEEEEEcCCHHHHHHH
Q 024161 155 QRKLVGVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEYLVLRAYEDDYGARRLY 234 (271)
Q Consensus 155 ~~~iVG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y 234 (271)
+.++|+.+++....+-+ .....+..++..++++|+|||+|+++-+-+.+.+..+..+ .-+.+. .|..+.++|
T Consensus 55 T~~via~~~~~~~~~l~----~~~d~pl~~~G~~w~~p~yRg~~~~kl~~~~~~~~~~~~~-~N~~~~---~~~~~~~~w 126 (181)
T PF06852_consen 55 TDRVIATVHLIRFDPLN----PSPDKPLQFIGFFWIDPEYRGKGIMKLQDDICMDELDSVD-DNSVAQ---GNVKMSNFW 126 (181)
T ss_pred CCcEEEEEEEEEeccCC----CCCCCCeEEEeeeeeCCcccCcchHHHHHHHHHHHhccCC-Cceeee---cCHHHHHHH
Confidence 35899888876432111 1223578899999999999999999644444444444322 223333 566688888
Q ss_pred HhC-CCEEeeccCCcc
Q 024161 235 SNA-GYRVVSSDLPWF 249 (271)
Q Consensus 235 ~k~-GF~~~~~~~~~~ 249 (271)
.+. ||...+....|.
T Consensus 127 ~k~~G~~~~~h~~~y~ 142 (181)
T PF06852_consen 127 HKMFGFDDYGHDWYYV 142 (181)
T ss_pred HHHhCCCCCccceeEe
Confidence 665 988877744444
No 80
>PF04958 AstA: Arginine N-succinyltransferase beta subunit; InterPro: IPR007041 Arginine N-succinyltransferase catalyses the transfer of succinyl-CoA to arginine to produce succinylarginine. This is the first step in arginine catabolism via the arginine succinyltransferase pathway. Six major L-arginine-degrading pathways have been described for prokaryotes []. Many bacteria arginine succinyltransferase 2.3.1.109 from EC, which is the AstA protein of the succinyltransferase (ast) pathway operon consists of five genes. In a few species, such as Pseudomonas aeruginosa, a tandem gene pair encodes alpha and beta subunits of a heterodimer that is designated arginine and ornithine succinyltransferase (AOST). This entry represents the family of proteins that make up the beta subunit of the heterodimer of Ast and AOST.; GO: 0008791 arginine N-succinyltransferase activity, 0006527 arginine catabolic process; PDB: 1YLE_A.
Probab=97.48 E-value=0.0041 Score=55.80 Aligned_cols=147 Identities=12% Similarity=0.121 Sum_probs=75.1
Q ss_pred eEEEEccCCcccHHHHHHHHHHhccCCccccchhhHHhhHHHHHHHHHH---HHhc-C---CCCcceEEEEeeCCCCCCC
Q 024161 80 WKVRKLVRVGEEMREVAFIQAEAFHNPVALFNDVFFEFFKAEVLSGLLY---KLRN-S---PPDRYACLVAEHSNPNDNI 152 (271)
Q Consensus 80 ~~IR~at~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~-~---~~~~~~~~Va~~~~~~~~~ 152 (271)
+.||+++ .+|+++|.++-..+=..-..+-. +++.+.+.+.+ .+.. . +.+..++||.|+..
T Consensus 2 ~viRp~~--~~Dl~aL~~LA~~sg~G~TsLP~------d~~~L~~rI~~S~~sFa~~~~~~~~~~~YlfVLED~~----- 68 (342)
T PF04958_consen 2 LVIRPAR--PSDLDALYALARESGPGFTSLPP------DREALAERIERSERSFAGRDVDFPGDEGYLFVLEDTE----- 68 (342)
T ss_dssp EEEEE----GGGHHHHHHHHHHS-TT-TTS-S-------HHHHHHHHHHHHHHHH-TT----S--EEEEEEEETT-----
T ss_pred eEEecCc--hhhHHHHHHHHHHcCCCcccCCC------CHHHHHHHHHHHHHHhhccccCCCCccceEEEEEecC-----
Confidence 4699998 99999999997765321111111 12222222221 1211 1 11334588998765
Q ss_pred CCCCcEEEEEEEEeecC--Cc-----------------------ccccccCCCCeEEEEEEEECCCccCccHHHHHHHHH
Q 024161 153 EPQRKLVGVVDVTVLRD--DP-----------------------VLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKAC 207 (271)
Q Consensus 153 ~~~~~iVG~~~l~~~~~--~~-----------------------~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~ 207 (271)
+|+|||++.+.-... .| .+.-.+.-.+...|.+++++|+||+-|.|+.|-+..
T Consensus 69 --tg~vvGts~I~a~vG~~~PfY~yr~~~~vh~S~~L~v~~~~~~L~L~~d~tG~sEl~tLfL~p~~R~~~~G~lLSr~R 146 (342)
T PF04958_consen 69 --TGEVVGTSAIEAAVGLDEPFYSYRVSTLVHASRELGVRNRHETLTLSNDYTGCSELCTLFLDPDYRGGGNGRLLSRSR 146 (342)
T ss_dssp --T--EEEEEEEESSTTSSS---EEEEEEEEEEETTTTEEEEEEEEEEE-TTTTSEEEEEEEE-GGGTTSHHHHHHHHHH
T ss_pred --CCcEEEEEeEEeccCCCCCcEEEEcCceeEcCcccCCccceeeEeeecCCCCCeeeEEEEECHHHcCCchHHHHHHHH
Confidence 579999996553210 01 111112244566799999999999999999999887
Q ss_pred HHHHHHcC---CcEEEEEEEc--CCHHHHHHHHhCCCEE
Q 024161 208 EVLAVLWG---FEYLVLRAYE--DDYGARRLYSNAGYRV 241 (271)
Q Consensus 208 ~~~a~~~g---~~~i~l~v~~--~N~~A~~~Y~k~GF~~ 241 (271)
.-...+.. -+++..+.-. +-.+--+||+.+|=..
T Consensus 147 fLFiA~~~~rF~~~viAElrG~~De~G~SPFWdalG~~F 185 (342)
T PF04958_consen 147 FLFIAQHRERFADRVIAELRGVSDEDGRSPFWDALGRHF 185 (342)
T ss_dssp HHHHHH-GGGS-SEEEEE--B---TT---HHHHHTGGGT
T ss_pred HHHHHhChhhcchheeeeccCCcCCCCCCchHHHhhccc
Confidence 66655431 2344443321 2223457777777444
No 81
>COG5628 Predicted acetyltransferase [General function prediction only]
Probab=97.46 E-value=0.00084 Score=50.47 Aligned_cols=73 Identities=18% Similarity=0.134 Sum_probs=54.5
Q ss_pred cEEEEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcEEEEEEEcCCHHHHHHHHh
Q 024161 157 KLVGVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEYLVLRAYEDDYGARRLYSN 236 (271)
Q Consensus 157 ~iVG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y~k 236 (271)
.+||++.+--... ....-.+.+..+++...|||+|+|++..+++-..+. | ...+.+...|.+|+.|++|
T Consensus 47 ~~igf~l~L~~~~-------~~~~iD~~~~efFIi~k~~~~GvGR~aaK~If~~~~--g--~w~Va~i~EN~PA~~fwK~ 115 (143)
T COG5628 47 LPVGFALVLDLAH-------SPTPIDRAVAEFFIVRKHRRRGVGRAAAKAIFGSAW--G--VWQVATVRENTPARAFWKR 115 (143)
T ss_pred ceeeeeeeecccC-------CCCcccccchheEeeehhhccchhHHHHHHHHHHhh--c--eEEEEEeccCChhHHHHHh
Confidence 7999997653211 111122447888999999999999999999865543 3 5778888899999999999
Q ss_pred CCCE
Q 024161 237 AGYR 240 (271)
Q Consensus 237 ~GF~ 240 (271)
.-..
T Consensus 116 ~~~t 119 (143)
T COG5628 116 VAET 119 (143)
T ss_pred hhcc
Confidence 7554
No 82
>PRK13834 putative autoinducer synthesis protein; Provisional
Probab=97.45 E-value=0.0073 Score=50.77 Aligned_cols=134 Identities=10% Similarity=0.105 Sum_probs=87.8
Q ss_pred cccHHHHHHHHHHhccCCccccchhhHHhhHHHHHHHHHHHHhcCCCCcceEEEEeeCCCCCCCCCCCcEEEEEEEEeec
Q 024161 89 GEEMREVAFIQAEAFHNPVALFNDVFFEFFKAEVLSGLLYKLRNSPPDRYACLVAEHSNPNDNIEPQRKLVGVVDVTVLR 168 (271)
Q Consensus 89 ~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Va~~~~~~~~~~~~~~iVG~~~l~~~~ 168 (271)
.++++++-.+..++|.+..+|-... ...+. ....+.....++|+..++ |+|||++-+-+..
T Consensus 15 ~~~l~~~~rLR~~VF~~elgW~~~~---------~~g~E--~D~yD~~~~~yll~~~~~--------g~vvG~~RLlptt 75 (207)
T PRK13834 15 ASLLKQMHRLRARVFGGRLGWDVSI---------TDGEE--RDQFDDLKPTYILAISDS--------GRVAGCARLLPAI 75 (207)
T ss_pred HHHHHHHHHHHHHHhccccCCCCCC---------CCCcC--ccCCCCCCCEEEEEEeCC--------CeEEEEEecccCC
Confidence 5778888889999998654442110 00100 001122222455655443 5899999887654
Q ss_pred CCcc----------cccccCCCCeEEEEEEEECCCccCc---c----HHHHHHHHHHHHHHHcCCcEEEEEEEcCCHHHH
Q 024161 169 DDPV----------LQHLRGAEEYLYISGLAVSKRFRRQ---K----IATALMKACEVLAVLWGFEYLVLRAYEDDYGAR 231 (271)
Q Consensus 169 ~~~~----------~~~~~~~~~~~yi~~l~V~p~~RGk---G----iGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~ 231 (271)
.+.. ...++...+.|.+..++|+|++++. + +...|+..+.+++.+.|++.+...+.. .-.
T Consensus 76 ~p~ml~~~fp~l~~~~~~~~~~~v~E~SRf~V~~~~~~~~~~~~~~~~~~~L~~~~~~~a~~~Gi~~~~~v~~~---~~~ 152 (207)
T PRK13834 76 GPTMLAQVFPQLLPAGRLNAHPAMIESSRFCVDTALAEGRGGGQLHEATLTMFAGIIEWSMANGYTEIVTATDL---RFE 152 (207)
T ss_pred CcchhhhhcHHhcCCCCCCCCCCEEEEeeeEEcccccccccccccCHHHHHHHHHHHHHHHHCCCCEEEEEECH---HHH
Confidence 3310 0112335679999999999986422 2 667899999999999999999888655 377
Q ss_pred HHHHhCCCEEeec
Q 024161 232 RLYSNAGYRVVSS 244 (271)
Q Consensus 232 ~~Y~k~GF~~~~~ 244 (271)
+++.++||.....
T Consensus 153 r~l~r~G~~~~~l 165 (207)
T PRK13834 153 RILARAGWPMQRL 165 (207)
T ss_pred HHHHHcCCCeEEC
Confidence 8999999987544
No 83
>PRK10456 arginine succinyltransferase; Provisional
Probab=97.34 E-value=0.0037 Score=55.93 Aligned_cols=117 Identities=14% Similarity=0.137 Sum_probs=68.7
Q ss_pred eEEEEccCCcccHHHHHHHHHHhccCCccccchhhHHhhHHHHHHHHHHH---Hhc-CC-CCcceEEEEeeCCCCCCCCC
Q 024161 80 WKVRKLVRVGEEMREVAFIQAEAFHNPVALFNDVFFEFFKAEVLSGLLYK---LRN-SP-PDRYACLVAEHSNPNDNIEP 154 (271)
Q Consensus 80 ~~IR~at~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~-~~-~~~~~~~Va~~~~~~~~~~~ 154 (271)
+.||+++ .+|+++|.++..++=..-..+- .+++.+.+.+.+- +.. .. .+....||.|+.+
T Consensus 2 ~vvRpv~--~~Dl~aL~~LA~~sG~G~TsLP------~d~~~L~~rI~~S~~sF~~~~~~~~~~YlFVLED~~------- 66 (344)
T PRK10456 2 MVIRPVE--RSDLAALMQLAGKTGGGLTSLP------ANEATLAARIERALKTWQGELPKSEQGYVFVLEDSE------- 66 (344)
T ss_pred eEEecCc--cccHHHHHHHHHHcCCCcccCC------CCHHHHHHHHHHHHHHhcCcCCCCCccEEEEEEeCC-------
Confidence 5799998 9999999998766532211111 1122222222211 111 11 2334588888755
Q ss_pred CCcEEEEEEEEeec--CCcc-----------------------cccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHH
Q 024161 155 QRKLVGVVDVTVLR--DDPV-----------------------LQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEV 209 (271)
Q Consensus 155 ~~~iVG~~~l~~~~--~~~~-----------------------~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~ 209 (271)
+|+|||++.+.-.. ..|+ +.--+.-.+...|.+++++|+||+-|.|+.|-+...-
T Consensus 67 tg~vvGts~I~a~vG~~~PfY~yr~~~~vhaS~~L~v~~~~~~L~l~nd~tG~sElctLfl~p~~R~~~~G~LLSr~RfL 146 (344)
T PRK10456 67 TGTVAGICAIEVAVGLNDPWYNYRVGTLVHASKELNVYNALPTLFLSNDHTGSSELCTLFLDPDWRKEGNGYLLSKSRFM 146 (344)
T ss_pred CCcEEEEEeEEecccCCCCCEEEEcCceeecCcccCCceeeeeEEeeccCCCCceeEEEEECHHHcCCCchhHHHHHHHH
Confidence 57999999665321 1111 0001123445569999999999999999998887654
Q ss_pred HH
Q 024161 210 LA 211 (271)
Q Consensus 210 ~a 211 (271)
..
T Consensus 147 Fi 148 (344)
T PRK10456 147 FM 148 (344)
T ss_pred HH
Confidence 44
No 84
>TIGR03245 arg_AOST_alph arginine/ornithine succinyltransferase, alpha subunit. In some bacteria, including Pseudomonas aeruginosa, the astB gene (arginine N-succinyltransferase) is replaced by tandem paralogs that form a heterodimer. This heterodimer from P. aeruginosa is characterized as arginine and ornithine N-2 succinyltransferase (AOST). Members of this protein family represent the less widespread paralog, designated AruI, or arginine/ornithine succinyltransferase, alpha subunit.
Probab=97.21 E-value=0.0053 Score=54.81 Aligned_cols=116 Identities=16% Similarity=0.152 Sum_probs=67.5
Q ss_pred EEEccCCcccHHHHHHHHHHhccCCccccchhhHHhhHHHHHHHHHH---HH---hcCCCCcceEEEEeeCCCCCCCCCC
Q 024161 82 VRKLVRVGEEMREVAFIQAEAFHNPVALFNDVFFEFFKAEVLSGLLY---KL---RNSPPDRYACLVAEHSNPNDNIEPQ 155 (271)
Q Consensus 82 IR~at~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~---~~---~~~~~~~~~~~Va~~~~~~~~~~~~ 155 (271)
||+++ .+|+++|.++-.++=..-..+-. +++.+.+.+.+ -+ ...+.+....||.|+.+ +
T Consensus 2 iRpv~--~~Dl~aL~~LA~~sG~G~TsLP~------d~~~L~~rI~~S~~sF~~~~~~~~~~~YlFVLEDt~-------t 66 (336)
T TIGR03245 2 VRPSR--FADLPAIERLANESAIGVTSLPA------DRAKLGEKIAQSERSFAAEVSFVGEERYLFVLEDTE-------T 66 (336)
T ss_pred cccCc--cccHHHHHHHHHHcCCCcccCCC------CHHHHHHHHHHHHHHHHhhcCCCCCccEEEEEEeCC-------C
Confidence 79998 99999999987665322111111 11111111111 11 11122344588888765 5
Q ss_pred CcEEEEEEEEeec--CCcc-----------------------cccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHH
Q 024161 156 RKLVGVVDVTVLR--DDPV-----------------------LQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVL 210 (271)
Q Consensus 156 ~~iVG~~~l~~~~--~~~~-----------------------~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~ 210 (271)
|+|||++.+.... ..|+ +.--+.-.+...|-+++++|+||+-|.|+.|-+...-.
T Consensus 67 g~vvGts~I~a~vG~~~PfY~yr~~~~vhaS~~L~v~~~~~~L~l~nd~tG~sElctLfL~p~~R~~~~G~lLSr~RfLF 146 (336)
T TIGR03245 67 GKLLGTSSIVASAGYGEPFYSYRNDTLIHASRELKVNNKIHVLYMCHELTGSSLLCSFYVDPRLRKTEAAELLSRARLLF 146 (336)
T ss_pred CcEEEEEeEEecccCCCCCEEEEcCceeecCcccCCccceeeEEeeccCCCCeeeEEEEECHHHcCCCchhHHHHHHHHH
Confidence 7999999665321 1111 10011234556699999999999999999988876554
Q ss_pred HH
Q 024161 211 AV 212 (271)
Q Consensus 211 a~ 212 (271)
..
T Consensus 147 iA 148 (336)
T TIGR03245 147 MA 148 (336)
T ss_pred HH
Confidence 43
No 85
>TIGR03243 arg_catab_AOST arginine and ornithine succinyltransferase subunits. In many bacteria, the sole member of this protein family is arginine N-succinyltransferase (EC 2.3.1.109), the AstA protein of the arginine succinyltransferase (ast) pathway. However, in Pseudomonas aeruginosa and several other species, a tandem gene pair encodes alpha and beta subunits of a heterodimer that is designated arginine and ornithine succinyltransferase (AOST).
Probab=97.12 E-value=0.0064 Score=54.29 Aligned_cols=116 Identities=14% Similarity=0.138 Sum_probs=67.5
Q ss_pred EEEccCCcccHHHHHHHHHHhccCCccccchhhHHhhHHHHHHHHHH---HH--hcCCCCcceEEEEeeCCCCCCCCCCC
Q 024161 82 VRKLVRVGEEMREVAFIQAEAFHNPVALFNDVFFEFFKAEVLSGLLY---KL--RNSPPDRYACLVAEHSNPNDNIEPQR 156 (271)
Q Consensus 82 IR~at~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~---~~--~~~~~~~~~~~Va~~~~~~~~~~~~~ 156 (271)
||+++ .+|+++|.++..++=..-..+-. +++.+.+.+.+ -+ .....+....||.|+.+ +|
T Consensus 2 vRpv~--~~Dl~aL~~LA~~sg~G~TsLP~------d~~~L~~rI~~S~~sF~~~~~~~~~~YlFVLED~~-------tg 66 (335)
T TIGR03243 2 VRPVR--TSDLDALMQLARESGIGLTSLPA------DRAALGSRIARSEKSFAGESTRGEEGYLFVLEDTE-------TG 66 (335)
T ss_pred cccCc--cccHHHHHHHHHHcCCCcccCCC------CHHHHHHHHHHHHHHHhcccCCCCccEEEEEEeCC-------CC
Confidence 79998 99999999987665321111111 11111111111 11 01122344588888765 57
Q ss_pred cEEEEEEEEeec--CCcc-----------------------cccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHH
Q 024161 157 KLVGVVDVTVLR--DDPV-----------------------LQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLA 211 (271)
Q Consensus 157 ~iVG~~~l~~~~--~~~~-----------------------~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a 211 (271)
+|||++.+.... ..|+ +.--+.-.+...|-+++++|+||+-|.|+.|-+...-..
T Consensus 67 ~vvGts~I~a~vG~~~PfY~yrv~~~vhaS~~L~v~~~~~~L~l~nd~tG~sElctLfL~p~~R~~~~G~LLSr~RfLFi 146 (335)
T TIGR03243 67 TVAGVSAIEAAVGLDEPFYNYRVGTLVHASRELGVYNKIPTLTLSNDLTGSSELCTLFLDPDYRKGGNGRLLSRSRFLFI 146 (335)
T ss_pred eEEEEEeEEecccCCCCCEEEEcCceeecCcccCCccceeeEEeeccCCCCeeeEEEEECHHHcCCCchhhHHHHHHHHH
Confidence 999999665321 1111 100112345566999999999999999999888765544
Q ss_pred H
Q 024161 212 V 212 (271)
Q Consensus 212 ~ 212 (271)
.
T Consensus 147 A 147 (335)
T TIGR03243 147 A 147 (335)
T ss_pred H
Confidence 3
No 86
>TIGR03244 arg_catab_AstA arginine N-succinyltransferase. In many bacteria, the arginine succinyltransferase (ast) pathway operon consists of five genes, including this protein, arginine N-succinyltransferase (EC 2.3.1.109). In a few species, such as Pseudomonas aeruginosa, the member of this family is encoded adjacent to a paralog, and the two polypeptides form a heterodimeric enzyme, active on both arginine and ornithine. In such species, this polypeptide may be treated as the beta subunit of an enzyme that may be named either arginine N-succinyltransferase (AST) or arginine and orthithine N-succinyltransferase (AOST).
Probab=97.10 E-value=0.0071 Score=54.07 Aligned_cols=115 Identities=12% Similarity=0.121 Sum_probs=67.0
Q ss_pred EEEccCCcccHHHHHHHHHHhccCCccccchhhHHhhHHHHHHHHHHH---HhcC-C-CCcceEEEEeeCCCCCCCCCCC
Q 024161 82 VRKLVRVGEEMREVAFIQAEAFHNPVALFNDVFFEFFKAEVLSGLLYK---LRNS-P-PDRYACLVAEHSNPNDNIEPQR 156 (271)
Q Consensus 82 IR~at~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~-~-~~~~~~~Va~~~~~~~~~~~~~ 156 (271)
||+++ .+|+++|.++..++=..-..+- .+++.+.+.+..- +... . .+....||.|+.+ +|
T Consensus 2 vRPv~--~~Dl~aL~~LA~~sg~G~TsLP------~d~~~L~~rI~~S~~sF~~~~~~~~~~YlFVLEDt~-------tg 66 (336)
T TIGR03244 2 VRPVE--TSDLDALYQLAQSTGIGLTSLP------ANEDLLSARIERAEKTFSGELTRAEQGYLFVLEDTE-------TG 66 (336)
T ss_pred cccCc--cccHHHHHHHHHHcCCCcccCC------CCHHHHHHHHHHHHHHhcCcCCCCCccEEEEEEeCC-------CC
Confidence 79998 9999999998776532111111 1122222222211 1111 1 2234588888755 57
Q ss_pred cEEEEEEEEeec--CCcc-----------------------cccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHH
Q 024161 157 KLVGVVDVTVLR--DDPV-----------------------LQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLA 211 (271)
Q Consensus 157 ~iVG~~~l~~~~--~~~~-----------------------~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a 211 (271)
+|||++.+.... ..|+ +.--+.-.+...|-+++++|+||+-|.|+.|-+...-..
T Consensus 67 ~vvGts~I~a~vG~~~PfY~yr~~~~vhaS~~L~v~~~~~~L~l~nd~tG~SElctLfL~p~~R~~~~G~LLSr~RfLFi 146 (336)
T TIGR03244 67 TVAGVSAIEAAVGLEEPFYNYRVGTVVHASKELGIYKALETLFLSNDLTGYSELCTLFLDPDYRKGGNGRLLSKSRFLFI 146 (336)
T ss_pred eEEEEEeEEecccCCCCCEEEEcCceeecCcccCCceeeeeEEeeccCCCCeeeEEEEECHHHcCCcchhhHHHHHHHHH
Confidence 999999665321 1111 100112345566999999999999999998887654443
No 87
>COG3916 LasI N-acyl-L-homoserine lactone synthetase [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=96.94 E-value=0.034 Score=46.15 Aligned_cols=135 Identities=16% Similarity=0.120 Sum_probs=88.7
Q ss_pred cccHHHHHHHHHHhccCCccccchhhHHhhHHHHHHHHH-HHHhcCCCCcceEEEEeeCCCCCCCCCCCcEEEEEEEEee
Q 024161 89 GEEMREVAFIQAEAFHNPVALFNDVFFEFFKAEVLSGLL-YKLRNSPPDRYACLVAEHSNPNDNIEPQRKLVGVVDVTVL 167 (271)
Q Consensus 89 ~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~Va~~~~~~~~~~~~~~iVG~~~l~~~ 167 (271)
++-++++..+..++|.+...|-... ...++ +.+ +...-.++++...+ ++|+|++.+-+.
T Consensus 14 ~~~l~em~rlR~~vF~erL~W~v~~---------~~g~E~Dqy---D~~~t~Yll~~~~~--------g~I~G~~RlLpt 73 (209)
T COG3916 14 PKALEEMHRLRYQVFKERLGWDVVC---------IDGFEIDQY---DNLDTVYLLALTSD--------GRIVGCVRLLPT 73 (209)
T ss_pred HHHHHHHHHHHHHHHHHhcCCceec---------cCCcccccc---CCCCceEEEEEcCC--------CcEEEEEEeccC
Confidence 5667788888888987644332211 00000 111 21222356664332 599999988776
Q ss_pred cCCcc----------cccccCCCCeEEEEEEEECC--CccC---cc-HHHHHHHHHHHHHHHcCCcEEEEEEEcCCHHHH
Q 024161 168 RDDPV----------LQHLRGAEEYLYISGLAVSK--RFRR---QK-IATALMKACEVLAVLWGFEYLVLRAYEDDYGAR 231 (271)
Q Consensus 168 ~~~~~----------~~~~~~~~~~~yi~~l~V~p--~~RG---kG-iGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~ 231 (271)
..+.. +..++...++|....++|++ .-++ .. ++..|+..+++++.++|++.|...+... -.
T Consensus 74 t~P~mL~~vF~~Ll~~~~~P~~p~vwEsSRF~vd~~~a~~~~g~~~~a~~el~~g~ie~a~~~G~~~IvtVt~~~---me 150 (209)
T COG3916 74 TGPYMLTDVFPALLEGGPPPSSPGVWESSRFAVDKPSARRAAGGVSPAAYELFAGMIEYALARGITGIVTVTDTG---ME 150 (209)
T ss_pred CCcchhhhhhHHHhcCCCCCCCCCeEEEeeeeeccccchhhcCCccHHHHHHHHHHHHHHHHcCCceEEEEEchH---HH
Confidence 65421 12234456899999999997 3333 23 4778999999999999999998887655 78
Q ss_pred HHHHhCCCEEeeccC
Q 024161 232 RLYSNAGYRVVSSDL 246 (271)
Q Consensus 232 ~~Y~k~GF~~~~~~~ 246 (271)
+++++.||.....-+
T Consensus 151 ril~r~Gw~~~riG~ 165 (209)
T COG3916 151 RILRRAGWPLTRIGP 165 (209)
T ss_pred HHHHHcCCCeEEcCC
Confidence 999999998866643
No 88
>PF13880 Acetyltransf_13: ESCO1/2 acetyl-transferase
Probab=96.69 E-value=0.0023 Score=43.82 Aligned_cols=29 Identities=38% Similarity=0.290 Sum_probs=25.6
Q ss_pred EEEEEEEECCCccCccHHHHHHHHHHHHH
Q 024161 183 LYISGLAVSKRFRRQKIATALMKACEVLA 211 (271)
Q Consensus 183 ~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a 211 (271)
+.|..++|+|.+|++||++.||+.+.+..
T Consensus 6 ~GI~RIWV~~~~RR~GIAt~Lld~ar~~~ 34 (70)
T PF13880_consen 6 CGISRIWVSPSHRRKGIATRLLDAARENF 34 (70)
T ss_pred EEeEEEEeChhhhhhhHHHHHHHHHHHhc
Confidence 45899999999999999999999986654
No 89
>TIGR03827 GNAT_ablB putative beta-lysine N-acetyltransferase. Members of this protein family are GNAT family acetyltransferases, based on a seed alignment in which every member is associated with a lysine 2,3-aminomutase family protein, usually as the adjacent gene. This family includes AblB, the enzyme beta-lysine acetyltransferase that completes the two-step synthesis of the osmolyte (compatible solute) N-epsilon-acetyl-beta-lysine; all members of the family may have this function. Note that N-epsilon-acetyl-beta-lysine has been observed only in methanogenic archaea (e.g. Methanosarcina) but that this model, paired with TIGR03820, suggests a much broader distribution.
Probab=96.35 E-value=0.012 Score=51.25 Aligned_cols=72 Identities=21% Similarity=0.266 Sum_probs=59.6
Q ss_pred EEEECCCccCccHHHHHHHHHHHHHHHcCCcEEEEEEEcCCHHHHHHHHhCCCEEeeccCCccccccCccceEEEEEecC
Q 024161 187 GLAVSKRFRRQKIATALMKACEVLAVLWGFEYLVLRAYEDDYGARRLYSNAGYRVVSSDLPWFSTWIGRKRRVLMIKRSD 266 (271)
Q Consensus 187 ~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y~k~GF~~~~~~~~~~~~~~~~~~~~~m~K~l~ 266 (271)
.++|...+.+- ...|+..+++.|++.|+.+|.+-|... +..+|++.||..++.+|+|+ .| +..++|.|.++
T Consensus 12 r~~~~~~~~~~--~~~~~~~~~~~a~~~~~~ki~~~~~~~---~~~~~~~~g~~~e~~i~~~f---~g-~~~~~~~~~~~ 82 (266)
T TIGR03827 12 RIYVMKLTGND--VEALIPDLDALAKKEGYTKIIAKVPGS---DKPLFEERGYLEEAKIPGYF---NG-HDAYFMSKYLD 82 (266)
T ss_pred eEEEEecCCcc--HHHHHHHHHHHHHHcCCcEEEEEccHH---HHHHHHHCCCeEEEeccccc---CC-CceEEEEEcCc
Confidence 33455444443 689999999999999999999999888 68999999999999999988 33 57899998876
Q ss_pred C
Q 024161 267 H 267 (271)
Q Consensus 267 ~ 267 (271)
.
T Consensus 83 ~ 83 (266)
T TIGR03827 83 E 83 (266)
T ss_pred h
Confidence 5
No 90
>COG1243 ELP3 Histone acetyltransferase [Transcription / Chromatin structure and dynamics]
Probab=96.27 E-value=0.0067 Score=55.94 Aligned_cols=51 Identities=18% Similarity=0.357 Sum_probs=45.3
Q ss_pred CCCccCccHHHHHHHHHHHHHHHcCCcEEEEEEEcCCHHHHHHHHhCCCEEeec
Q 024161 191 SKRFRRQKIATALMKACEVLAVLWGFEYLVLRAYEDDYGARRLYSNAGYRVVSS 244 (271)
Q Consensus 191 ~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y~k~GF~~~~~ 244 (271)
...||-+|+|+.||+.+++.|++.+.++|.+.. -.+++..|+|+||+..+-
T Consensus 459 ~~~~QH~G~G~~L~~~AE~ia~ee~~~ki~viS---giG~ReYy~k~GY~~~gp 509 (515)
T COG1243 459 EDEWQHRGYGRELLEEAERIAREEGAKKILVIS---GIGVREYYRKLGYELDGP 509 (515)
T ss_pred cchhhcccHHHHHHHHHHHHHHhhccccEEEEe---cccHHHHHHHhCccccCC
Confidence 568999999999999999999999998888774 455999999999998775
No 91
>PF05301 Mec-17: Touch receptor neuron protein Mec-17; InterPro: IPR007965 Mec-17 is the protein product of one of the 18 genes required for the development and function of the touch receptor neuron for gentle touch. Mec-17 is specifically required for maintaining the differentiation of the touch receptor []. This family is conserved to higher eukaryotes.; GO: 0019799 tubulin N-acetyltransferase activity
Probab=96.26 E-value=0.065 Score=40.55 Aligned_cols=78 Identities=13% Similarity=0.064 Sum_probs=50.7
Q ss_pred CCcEEEEEEEEeec----CCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcEEEEEEEcCCHHH
Q 024161 155 QRKLVGVVDVTVLR----DDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEYLVLRAYEDDYGA 230 (271)
Q Consensus 155 ~~~iVG~~~l~~~~----~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A 230 (271)
.+.++|+.-+.... +.... .....+...|.+++|++..|++|+|++|+++++.. .++.-..+.+....+.-
T Consensus 17 ~g~viG~LKVG~K~Lfl~d~~g~--~~e~~~~~cvLDFyVhes~QR~G~Gk~LF~~ML~~---e~~~p~~~a~DrPS~Kl 91 (120)
T PF05301_consen 17 KGAVIGFLKVGYKKLFLLDERGQ--HREIEPLLCVLDFYVHESRQRRGYGKRLFDHMLQE---ENVSPHQLAIDRPSPKL 91 (120)
T ss_pred CceEEEEEEEeeeeEEEEcCCCC--EEEecccceeeeEEEEeceeccCchHHHHHHHHHH---cCCCcccceecCCcHHH
Confidence 56899998654311 11100 01112333578999999999999999999998654 45555556666666667
Q ss_pred HHHHHhC
Q 024161 231 RRLYSNA 237 (271)
Q Consensus 231 ~~~Y~k~ 237 (271)
..|.+|+
T Consensus 92 l~Fl~Kh 98 (120)
T PF05301_consen 92 LSFLKKH 98 (120)
T ss_pred HHHHHHh
Confidence 7777765
No 92
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=96.05 E-value=0.032 Score=51.89 Aligned_cols=138 Identities=14% Similarity=0.145 Sum_probs=91.0
Q ss_pred CCCeEEEEccCCcccHHHHHHHHHHhccCCccccchhhHHhhHHHHHHHHHHHHhcCCCCcceEEEEeeCCCCCCCCCCC
Q 024161 77 EYGWKVRKLVRVGEEMREVAFIQAEAFHNPVALFNDVFFEFFKAEVLSGLLYKLRNSPPDRYACLVAEHSNPNDNIEPQR 156 (271)
Q Consensus 77 ~~~~~IR~at~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Va~~~~~~~~~~~~~ 156 (271)
...+++++.. ..++++|+++..+.= ...+. + ..-..++..+.... +.+..|-....+- .++.
T Consensus 411 em~l~vs~~d--e~~i~RIsQLtqkTN--QFnlT----t---kRy~e~dV~~~~~~---~~~li~sv~l~DK----fgDn 472 (574)
T COG3882 411 EMRLTVSKFD--EVNIPRISQLTQKTN--QFNLT----T---KRYNEEDVRQMQED---PNFLIFSVSLKDK----FGDN 472 (574)
T ss_pred eEEEEEeecc--ccCcHHHHHHhhccc--ceeec----h---hhhcHHHHHHHhhC---CCeEEEEEEeccc----cccC
Confidence 4456788885 999999999977531 11111 1 11122333332222 2332332222221 1234
Q ss_pred cEEEEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcEEEEEEEc--CCHHHHHHH
Q 024161 157 KLVGVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEYLVLRAYE--DDYGARRLY 234 (271)
Q Consensus 157 ~iVG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~--~N~~A~~~Y 234 (271)
-+||++.+.... +.|.|..+...=..=||+|-++||..+++.|...|+..+...-.+ -|.+-..||
T Consensus 473 Giigvviv~kk~------------~~w~IDt~lmSCRVlgRkvE~~l~~~~~e~A~~~gi~tir~~Y~pt~kN~pv~~Fy 540 (574)
T COG3882 473 GIIGVVIVEKKE------------SEWFIDTFLMSCRVLGRKVEQRLMNSLEEQALSEGINTIRGYYIPTEKNAPVSDFY 540 (574)
T ss_pred ceEEEEEEEecC------------CeEEhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcceeeeEecccccCCcHHHHH
Confidence 699999988532 455666666666667999999999999999999999988877655 688889999
Q ss_pred HhCCCEEeec
Q 024161 235 SNAGYRVVSS 244 (271)
Q Consensus 235 ~k~GF~~~~~ 244 (271)
+++||+..++
T Consensus 541 E~mgf~l~~e 550 (574)
T COG3882 541 ERMGFKLKGE 550 (574)
T ss_pred HHhccccccc
Confidence 9999996554
No 93
>TIGR03019 pepcterm_femAB FemAB-related protein, PEP-CTERM system-associated. Members of this protein family are found always as part of extended exopolysaccharide biosynthesis loci in bacteria. In nearly every case, these loci contain determinants for the processing of the PEP-CTERM proposed C-terminal protein sorting signal. This family shows remote, local sequence similarity to the FemAB protein family (see pfam02388), whose members
Probab=95.90 E-value=0.076 Score=47.74 Aligned_cols=135 Identities=10% Similarity=0.016 Sum_probs=87.9
Q ss_pred ecCCCeEEEEccCCcccHHHHHHHHHHhccCCccccchhhHHhhHHHHHHHHHHHHhcCCCCcceEEEEe-eCCCCCCCC
Q 024161 75 VSEYGWKVRKLVRVGEEMREVAFIQAEAFHNPVALFNDVFFEFFKAEVLSGLLYKLRNSPPDRYACLVAE-HSNPNDNIE 153 (271)
Q Consensus 75 ~~~~~~~IR~at~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Va~-~~~~~~~~~ 153 (271)
+...|++|+.. +|++...+++.+.+... +. +....+..+.+.+.+. +...+++++ .++
T Consensus 147 a~k~Gv~v~~~----~~l~~F~~l~~~t~~r~-g~------p~~~~~~f~~l~~~~~----~~~~l~~a~~~~g------ 205 (330)
T TIGR03019 147 GIKAGLTVTVD----GDLDRFYDVYAENMRDL-GT------PVFSRRYFRLLKDVFG----EDCEVLTVRLGDG------ 205 (330)
T ss_pred HHHCCeEEEEC----CcHHHHHHHHHHHHhcC-CC------CCCCHHHHHHHHHhcc----cCEEEEEEEeCCC------
Confidence 34567777654 45888888877766431 11 1112223344444332 233456666 454
Q ss_pred CCCcEEEEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcEEEEEEEcCCHHHHHH
Q 024161 154 PQRKLVGVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEYLVLRAYEDDYGARRL 233 (271)
Q Consensus 154 ~~~~iVG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~ 233 (271)
++||.+.+... .+..+....+.+++++..+-+..|+-.++++|.++|++...+.....|.+..+|
T Consensus 206 ---~~va~~l~~~~------------~~~~~~~~~g~~~~~~~~~~~~lL~w~~i~~a~~~G~~~fDfG~s~~~~G~~~F 270 (330)
T TIGR03019 206 ---VVASAVLSFYF------------RDEVLPYYAGGLREARDVAANDLMYWELMRRACERGLRVFDFGRSKRGTGPFKF 270 (330)
T ss_pred ---CEEEEEEEEEe------------CCEEEEEeccChHHHHhhChHHHHHHHHHHHHHHCCCcEEEcCCCCCCCccHHH
Confidence 78877655431 122222344678999999999999999999999999999999876666666777
Q ss_pred HHhCCCEEeecc
Q 024161 234 YSNAGYRVVSSD 245 (271)
Q Consensus 234 Y~k~GF~~~~~~ 245 (271)
=++.||+.+...
T Consensus 271 K~~~G~~~~~l~ 282 (330)
T TIGR03019 271 KKNWGFEPQPLH 282 (330)
T ss_pred HhcCCCeeccce
Confidence 788899987663
No 94
>PF02799 NMT_C: Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain; InterPro: IPR022677 Myristoyl-CoA:protein N-myristoyltransferase (2.3.1.97 from EC) (Nmt) [] is the enzyme responsible for transferring a myristate group on the N-terminal glycine of a number of cellular eukaryotics and viral proteins. Nmt is a monomeric protein of about 50 to 60kDa whose sequence appears to be well conserved. The N and C-terminal domains of NMT are structurally similar, each adopting an acyl-CoA N-acyltransferase-like fold. This entry represents the C-terminal region.; GO: 0004379 glycylpeptide N-tetradecanoyltransferase activity; PDB: 2P6G_B 2P6F_F 2P6E_A 1IIC_A 1IID_A 2NMT_A 2WUU_A 1IYL_B 1NMT_B 1IYK_A ....
Probab=95.81 E-value=0.21 Score=41.19 Aligned_cols=140 Identities=11% Similarity=0.102 Sum_probs=84.1
Q ss_pred EEEccCCcccHHHHHHHHHHhccCCccccchhhHHhhHHHHHHHHHHHHhcCCCCcceEEEEeeCCCCCCCCCCCcEEEE
Q 024161 82 VRKLVRVGEEMREVAFIQAEAFHNPVALFNDVFFEFFKAEVLSGLLYKLRNSPPDRYACLVAEHSNPNDNIEPQRKLVGV 161 (271)
Q Consensus 82 IR~at~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Va~~~~~~~~~~~~~~iVG~ 161 (271)
+|+++ ++|++++.+++.+.... ..+...+ ++ +.+.+++.. .+.....+|.+.++ ++|-.+
T Consensus 31 lR~m~--~~Dv~~v~~Ll~~yl~~-f~l~~~f----s~----eev~Hw~lp-~~~Vv~syVve~~~--------~~ITDf 90 (190)
T PF02799_consen 31 LRPME--EKDVPQVTKLLNKYLKK-FDLAPVF----SE----EEVKHWFLP-RKNVVYSYVVEDPD--------GKITDF 90 (190)
T ss_dssp EEE----GGGHHHHHHHHHHHHTT-SSEEEE------H----HHHHHHHS--BTTTEEEEEEEETT--------SEEEEE
T ss_pred cccCc--hhhHHHHHHHHHHHHHh-ccccccc----CH----HHHHhhccc-CCCeEEEEEEecCC--------CceeeE
Confidence 89998 99999999999987653 3333222 23 344445532 22345678888764 588888
Q ss_pred EEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcEEEEEEEcCCHHHHHHHHhCCCEE
Q 024161 162 VDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEYLVLRAYEDDYGARRLYSNAGYRV 241 (271)
Q Consensus 162 ~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y~k~GF~~ 241 (271)
+......+.......+..-+.+|+.--+... ==-.+|+..++-.|++.|++....--.-+|. .|.+.+.|..
T Consensus 91 ~SFY~Lpstvi~~~k~~~l~aAY~fY~~~~~-----~~l~~Lm~DaLi~Ak~~gfDVFNaLd~mdN~---~fL~~lKFg~ 162 (190)
T PF02799_consen 91 FSFYSLPSTVIGNPKHKTLKAAYSFYYVATS-----TRLKELMNDALILAKNEGFDVFNALDLMDNS---SFLEDLKFGP 162 (190)
T ss_dssp EEEEEEEEEESSSSSSSEEEEEEEEEEEESS-----SHHHHHHHHHHHHHHHTTESEEEEESTTTGG---GTTTTTT-EE
T ss_pred EEEeecceeecCCCCccceeeeeeeeeeecC-----CCHHHHHHHHHHHHHHcCCCEEehhhhccch---hhHhhCCccC
Confidence 8776543221111111222334443322222 1236789999999999999988777666766 7899999997
Q ss_pred eeccCCcc
Q 024161 242 VSSDLPWF 249 (271)
Q Consensus 242 ~~~~~~~~ 249 (271)
-.-.-+|+
T Consensus 163 GdG~L~YY 170 (190)
T PF02799_consen 163 GDGNLNYY 170 (190)
T ss_dssp EEEEEEEE
T ss_pred CCCCeEEE
Confidence 66544444
No 95
>COG3138 AstA Arginine/ornithine N-succinyltransferase beta subunit [Amino acid transport and metabolism]
Probab=95.42 E-value=0.075 Score=46.12 Aligned_cols=115 Identities=15% Similarity=0.121 Sum_probs=62.6
Q ss_pred EEEEccCCcccHHHHHHHHHHhccCCccccchhhHHhhHHHHHHHHHHHHhcC-CCCcceEEEEeeCCCCCCCCCCCcEE
Q 024161 81 KVRKLVRVGEEMREVAFIQAEAFHNPVALFNDVFFEFFKAEVLSGLLYKLRNS-PPDRYACLVAEHSNPNDNIEPQRKLV 159 (271)
Q Consensus 81 ~IR~at~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~Va~~~~~~~~~~~~~~iV 159 (271)
.|||++ ..|++++.++-.++=..-.++-.+ .+.....+......+.... +.+....+|.|+.+ +|++|
T Consensus 3 vvRP~~--~aDl~al~~LA~~sg~G~TsLP~d--e~~L~~Ri~~se~sf~~~~~~ge~~Y~fVLEDse-------tG~Vv 71 (336)
T COG3138 3 VVRPVE--RADLEALMELAVKTGVGLTSLPAD--EATLRARIERSEKSFQGELPPGEAGYLFVLEDSE-------TGTVV 71 (336)
T ss_pred cccccc--ccCHHHHHHHHHhcCCCcccCCCC--HHHHHHHHHHHHHHHhcccCCCCccEEEEEEecC-------CceEE
Confidence 589998 999999999877653321122211 1111111111111111111 22233578888855 67999
Q ss_pred EEEEEEeec--CCcccc-----------------------cccCCCCeEEEEEEEECCCccCccHHHHHHHH
Q 024161 160 GVVDVTVLR--DDPVLQ-----------------------HLRGAEEYLYISGLAVSKRFRRQKIATALMKA 206 (271)
Q Consensus 160 G~~~l~~~~--~~~~~~-----------------------~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~ 206 (271)
|++.+.-.- ..|+.. --+.-.+...+.+++++|+||.-|.|+-|-+.
T Consensus 72 G~saI~a~vGl~~PfYsyRv~tlvhaS~~L~v~~~i~~L~L~Nd~TG~SEl~sLFl~pd~Rkg~nG~Llsr~ 143 (336)
T COG3138 72 GISAIEAAVGLNDPFYSYRVGTLVHASPELNVYNEIPTLFLSNDLTGNSELCTLFLDPDWRKGGNGRLLSKS 143 (336)
T ss_pred eEEEEEEeeccCCccceeeeeeeeecCccccccccceeEEEeccCcCchhhhheeecHHHhcccchhhhhhh
Confidence 998654311 111110 01113344557899999999988888776553
No 96
>PF01233 NMT: Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain; InterPro: IPR022676 Myristoyl-CoA:protein N-myristoyltransferase (2.3.1.97 from EC) (Nmt) [] is the enzyme responsible for transferring a myristate group on the N-terminal glycine of a number of cellular eukaryotics and viral proteins. Nmt is a monomeric protein of about 50 to 60kDa whose sequence appears to be well conserved. The N and C-terminal domains of NMT are structurally similar, each adopting an acyl-CoA N-acyltransferase-like fold. This entry represents the N-terminal region. ; GO: 0004379 glycylpeptide N-tetradecanoyltransferase activity; PDB: 2P6G_B 2P6F_F 2P6E_A 1IIC_A 1IID_A 2NMT_A 4A33_A 3H5Z_A 4A2Z_A 2WSA_A ....
Probab=95.40 E-value=0.64 Score=37.18 Aligned_cols=120 Identities=22% Similarity=0.251 Sum_probs=70.8
Q ss_pred cCCCeEEEEcc-CCcccHHHHHHHHHHhccCCc-cccchhhHHhhHHHHHHHHHHHHhcCCCC---cceEEEEeeCCCCC
Q 024161 76 SEYGWKVRKLV-RVGEEMREVAFIQAEAFHNPV-ALFNDVFFEFFKAEVLSGLLYKLRNSPPD---RYACLVAEHSNPND 150 (271)
Q Consensus 76 ~~~~~~IR~at-~~~~D~~~i~~l~~~~f~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---~~~~~Va~~~~~~~ 150 (271)
.+.||....+. .++++++++-+++.+.+-++. ..+. +.| ..++..+... .+. .+++-|-...
T Consensus 20 LP~gF~W~~~dl~d~~~l~ely~lL~~nYVEDdd~~fR-f~Y-------S~efL~WaL~-pPg~~~~whiGVR~~~---- 86 (162)
T PF01233_consen 20 LPDGFEWSTLDLNDDEELKELYELLNENYVEDDDNMFR-FDY-------SKEFLKWALK-PPGWKKEWHIGVRVKS---- 86 (162)
T ss_dssp -STTEEEEE--TTSHHHHHHHHHHHHHHSSBTTTSSEE-E----------HHHHHHHHT-STT--GGGEEEEEETT----
T ss_pred CCCCCEEEecCCCCHHHHHHHHHHHHhcCccCCcceEE-eeC-------CHHHHhheee-CcCCccceEEEEEECC----
Confidence 56777776663 146777778888888875432 2221 111 2233444333 221 1234443333
Q ss_pred CCCCCCcEEEEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCC
Q 024161 151 NIEPQRKLVGVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGF 216 (271)
Q Consensus 151 ~~~~~~~iVG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~ 216 (271)
.+++|||+..-+..-.- ....-....|..++|++.+|.++++--|++.+.+.+...|+
T Consensus 87 ----~~kLvgfIsaip~~irv----~~~~~~~~eINFLCVhKklRskrlAPvLIkEItRRvn~~gI 144 (162)
T PF01233_consen 87 ----SKKLVGFISAIPATIRV----RDKVIKMVEINFLCVHKKLRSKRLAPVLIKEITRRVNLQGI 144 (162)
T ss_dssp ----TTEEEEEEEEEEEEEEE----TTEEEEEEEEEEEEE-GGGTTSSHHHHHHHHHHHHHHTTT-
T ss_pred ----CCEEEEEEccceEEEEE----eeeEeeeeeEEEEeecHhHhhcCCcHHHHHHHHHHhhhcCc
Confidence 25999999765422100 11123567799999999999999999999999999988885
No 97
>PF04768 DUF619: Protein of unknown function (DUF619); InterPro: IPR006855 This region of unknown function is found at the C terminus of Neurospora crassa acetylglutamate synthase (2.7.2.8 from EC). It is also found C-terminal to the amino acid kinase region in some fungal acetylglutamate kinase enzymes (IPR001048 from INTERPRO). These enzymes play a role in arginine biosynthesis.; PDB: 3S6K_A 4AB7_F 3ZZF_B 3ZZI_D 3ZZH_A 3ZZG_A 3S6G_Y 3S6H_A 3S7Y_A.
Probab=95.19 E-value=0.35 Score=39.31 Aligned_cols=121 Identities=21% Similarity=0.259 Sum_probs=70.5
Q ss_pred CeEEEEccC-Ccc-cHHHHHHHHHHhccCCccccchhhHHhhHHHHHHHHHHHHhcCCCCcceEEEEeeCCCCCCCCCCC
Q 024161 79 GWKVRKLVR-VGE-EMREVAFIQAEAFHNPVALFNDVFFEFFKAEVLSGLLYKLRNSPPDRYACLVAEHSNPNDNIEPQR 156 (271)
Q Consensus 79 ~~~IR~at~-~~~-D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Va~~~~~~~~~~~~~ 156 (271)
|..|...+. +.- |.+++.+++.++|..... .+.+..++.. ..+.+++.+.-
T Consensus 19 G~~i~~~~s~~~~~d~~kL~~ll~~sf~~~~~--------------v~~yl~~l~~---~~~~iy~d~~y---------- 71 (170)
T PF04768_consen 19 GYKILKHSSLSEFVDLDKLRALLERSFGGKLD--------------VDHYLDRLNN---RLFKIYVDEDY---------- 71 (170)
T ss_dssp ---EEEESSCCCSS-HHHHHHHHHHHSTSSSB--------------HTTHHHHHHT---S-SEEEEETTS----------
T ss_pred CeeeEEecCccccCCHHHHHHHHHhccccccc--------------HHHHHHHhhc---cceEEEEeCCc----------
Confidence 444555542 233 899999999999932111 1233334543 22334554433
Q ss_pred cEEEEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcEEEEEEEcCCHHHHHHH-H
Q 024161 157 KLVGVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEYLVLRAYEDDYGARRLY-S 235 (271)
Q Consensus 157 ~iVG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y-~ 235 (271)
-|.+.+.... +.......||..++|.|..||.|++..+.+++.+. ++.+.-.+.++|+ ..++| +
T Consensus 72 --~~~AIVt~e~-------~~~~~~v~yLdKFav~~~~~g~gv~D~vf~~i~~d-----~p~L~Wrsr~~n~-~~~Wyf~ 136 (170)
T PF04768_consen 72 --EGAAIVTPEG-------PDSNGPVPYLDKFAVSKSAQGSGVADNVFNAIRKD-----FPKLFWRSREDNP-NNKWYFE 136 (170)
T ss_dssp --SEEEEEEEE--------SCTCTSEEEEEEEEE-HHHHHTTHHHHHHHHHHHH------SSEEEEEETT-T-THHHHHH
T ss_pred --eEEEEEEecC-------CCCCCCCeEEEEEEecchhhhcCHHHHHHHHHHHh-----ccceEEEecCCCC-cccEEEE
Confidence 3666665432 12334789999999999999999999999988333 3447777788777 55666 4
Q ss_pred hC-CCEE
Q 024161 236 NA-GYRV 241 (271)
Q Consensus 236 k~-GF~~ 241 (271)
|. |+-.
T Consensus 137 rs~G~~~ 143 (170)
T PF04768_consen 137 RSDGSFK 143 (170)
T ss_dssp H-SEEEE
T ss_pred eeEEEEE
Confidence 43 6655
No 98
>cd04265 DUF619-NAGS-U DUF619 domain of various N-acetylglutamate Synthases (NAGS) of the urea (U) cycle of humans and fish. This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present in C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. The DUF619 domain function has yet to be characterized.
Probab=95.06 E-value=0.25 Score=36.42 Aligned_cols=43 Identities=21% Similarity=0.202 Sum_probs=35.6
Q ss_pred CeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcEEEEEEEcCCH
Q 024161 181 EYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEYLVLRAYEDDY 228 (271)
Q Consensus 181 ~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~ 228 (271)
+..||..++|.|..||.|+|..|++++.+. ++.+.-.+.++|+
T Consensus 33 ~~~yLdKfaV~~~~~g~gv~d~vf~~i~~d-----~~~L~Wrsr~~n~ 75 (99)
T cd04265 33 GVPYLDKFAVSSSAQGEGTGEALWRRLRRD-----FPKLFWRSRSTNP 75 (99)
T ss_pred CceEEEEEEEchhhhhcChHHHHHHHHHhh-----CCceEEEeCCCCc
Confidence 678999999999999999999999987544 3457777777776
No 99
>cd04264 DUF619-NAGS DUF619 domain of various N-acetylglutamate Synthases of the fungal arginine-biosynthetic pathway and urea cycle found in humans and fish. DUF619-NAGS: This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present in C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. The DUF619 domain function has yet to be characterized.
Probab=94.97 E-value=0.2 Score=36.92 Aligned_cols=58 Identities=19% Similarity=0.114 Sum_probs=44.1
Q ss_pred cEEEEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcEEEEEEEcCCH
Q 024161 157 KLVGVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEYLVLRAYEDDY 228 (271)
Q Consensus 157 ~iVG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~ 228 (271)
...|++.++... ...+..||..++|.|..||.|+|..|++++.+. ++.+.-.+.++|+
T Consensus 18 ~y~~~aIvt~~~---------~~~~~~yLdKfaV~~~~~g~gvad~vf~~i~~d-----~~~L~Wrsr~~n~ 75 (99)
T cd04264 18 GYNAAAIVTYEG---------VNNGVPYLDKFAVSSSAQGEGTSDALWRRLRRD-----FPKLFWRSRKTNP 75 (99)
T ss_pred CceEEEEEeccC---------CCCCceEEEEEEEchhhhhcChHHHHHHHHHhh-----CCceEEEeCCCCc
Confidence 366777776421 124678999999999999999999999987543 4667777777776
No 100
>PF01853 MOZ_SAS: MOZ/SAS family; InterPro: IPR002717 Moz is a monocytic leukemia Zn_finger protein and the SAS protein from Saccharomyces cerevisiae (Baker's yeast) is involved in silencing the Hmr locus. These proteins were reported to be homologous to acetyltransferases [] but this similarity is not supported by standard sequence analysis.; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus; PDB: 3TO6_A 1MJA_A 1MJ9_A 3TO7_A 3TO9_A 1MJB_A 1FY7_A 2OZU_A 2RC4_A 2OU2_A ....
Probab=94.90 E-value=0.095 Score=43.03 Aligned_cols=49 Identities=14% Similarity=0.065 Sum_probs=37.0
Q ss_pred CcEEEEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcC
Q 024161 156 RKLVGVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWG 215 (271)
Q Consensus 156 ~~iVG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g 215 (271)
-.+||+-.-.... .....+.++.|.|.||++|+|+-|++..-+.++..|
T Consensus 65 ~h~vGyFSKEk~s-----------~~~~NLsCIl~lP~yQrkGyG~~LI~fSY~LSr~e~ 113 (188)
T PF01853_consen 65 FHIVGYFSKEKES-----------WDNNNLSCILTLPPYQRKGYGRFLIDFSYELSRREG 113 (188)
T ss_dssp EEEEEEEEEESS------------TT-EEESEEEE-GGGTTSSHHHHHHHHHHHHHHHTT
T ss_pred ceeEEEEEEEecc-----------cCCeeEeehhhcchhhhcchhhhhhhhHHHHhhccC
Confidence 3688887765321 123458999999999999999999999999888765
No 101
>PLN03238 probable histone acetyltransferase MYST; Provisional
Probab=94.85 E-value=0.15 Score=44.52 Aligned_cols=49 Identities=14% Similarity=0.157 Sum_probs=37.7
Q ss_pred CcEEEEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcC
Q 024161 156 RKLVGVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWG 215 (271)
Q Consensus 156 ~~iVG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g 215 (271)
-.+||+-.-..... ....+..+.|.|.||++|+|+-|++..-+.++..|
T Consensus 140 ~h~vGYFSKEK~s~-----------~~nNLaCIltLPpyQrkGyG~~LI~fSYeLSr~Eg 188 (290)
T PLN03238 140 SHIVGYFSKEKVSA-----------EDYNLACILTLPPYQRKGYGKFLISFAYELSKREG 188 (290)
T ss_pred cEEEEEeceecccc-----------CCCcEEEEEecChhhhccHhHhHHHHHhHHhhccC
Confidence 37999876553211 11238999999999999999999999888887665
No 102
>KOG3698 consensus Hyaluronoglucosaminidase [Posttranslational modification, protein turnover, chaperones]
Probab=94.66 E-value=0.15 Score=48.48 Aligned_cols=58 Identities=14% Similarity=0.080 Sum_probs=51.5
Q ss_pred EEECCCccCccHHHHHHHHHHHHHHHcCCcEEEEEEEcCCHHHHHHHHhCCCEEeecc
Q 024161 188 LAVSKRFRRQKIATALMKACEVLAVLWGFEYLVLRAYEDDYGARRLYSNAGYRVVSSD 245 (271)
Q Consensus 188 l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y~k~GF~~~~~~ 245 (271)
.++..+.---|+.++|++-++...+.+|++...+.|..+..+-++||.++||..++..
T Consensus 822 ~~~~~~a~D~~~~k~m~~vll~tL~aNGsrGaf~~V~~dD~~~~~fys~lG~~d~~~~ 879 (891)
T KOG3698|consen 822 TYFGMDASDAHPMKKMIQVLLVTLAANGSRGAFLTVAIDDIERQKFYSELGLTDLGLS 879 (891)
T ss_pred hccccccccchHHHHHHHHHHHHHHhcCCcceeEEechhHHHHHHHHHHhchHHHhHh
Confidence 4455555678999999999999999999999999999999999999999999988774
No 103
>PHA01733 hypothetical protein
Probab=93.93 E-value=0.078 Score=41.91 Aligned_cols=77 Identities=13% Similarity=0.066 Sum_probs=50.3
Q ss_pred cEEEEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHH-HcCCcEEEEEEEcCCHHHHHHHH
Q 024161 157 KLVGVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAV-LWGFEYLVLRAYEDDYGARRLYS 235 (271)
Q Consensus 157 ~iVG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~-~~g~~~i~l~v~~~N~~A~~~Y~ 235 (271)
.+++...+.... ..+.+ ..|-+++..=.+ +-+.++..+-.+.. ...++.++-.|...|..+++|.+
T Consensus 57 ~l~aI~Gv~~d~-------~~~vG---~pWlV~T~~v~k---~~~~f~re~r~~l~e~~~Yp~LwNyV~~~N~~hir~Lk 123 (153)
T PHA01733 57 SLAGVAGLVEDM-------GNRVG---EIWMVCTPAIEK---NPIALLRGAKWWLPKSRNYDLLWNIVDKRNLVHRKLLR 123 (153)
T ss_pred cEEEEecccccc-------cCCCC---ceeEEecHHhHh---CCHHHHHHHHHHHHHhccccHHHHhHhcccHHHHHHHH
Confidence 788888877411 11222 244455444333 22334444433333 56789999999999999999999
Q ss_pred hCCCEEeeccC
Q 024161 236 NAGYRVVSSDL 246 (271)
Q Consensus 236 k~GF~~~~~~~ 246 (271)
.+||+.....+
T Consensus 124 ~lGF~f~~~~~ 134 (153)
T PHA01733 124 KLGFKGLRYVQ 134 (153)
T ss_pred HcCceeecccc
Confidence 99999988854
No 104
>KOG2779 consensus N-myristoyl transferase [Lipid transport and metabolism]
Probab=93.59 E-value=0.88 Score=40.86 Aligned_cols=141 Identities=11% Similarity=0.078 Sum_probs=84.4
Q ss_pred EEEEccCCcccHHHHHHHHHHhccCCccccchhhHHhhHHHHHHHHHHHHhcCCCCcceEEEEeeCCCCCCCCCCCcEEE
Q 024161 81 KVRKLVRVGEEMREVAFIQAEAFHNPVALFNDVFFEFFKAEVLSGLLYKLRNSPPDRYACLVAEHSNPNDNIEPQRKLVG 160 (271)
Q Consensus 81 ~IR~at~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Va~~~~~~~~~~~~~~iVG 160 (271)
-+|++. ..|++++.+++.+.... ..+...+ + .+++.+++.- .++....+|+|..+ |+|-+
T Consensus 262 G~R~me--~kDvp~V~~Ll~~yl~q-f~la~~f----~----~eev~Hwf~p-~e~VV~syVvesp~--------g~ITD 321 (421)
T KOG2779|consen 262 GLREME--EKDVPAVFRLLRNYLKQ-FELAPVF----D----EEEVEHWFLP-RENVVYSYVVESPN--------GKITD 321 (421)
T ss_pred Cccccc--ccchHHHHHHHHHHHHh-eeccccc----C----HHHhHhhccc-ccceEEEEEEECCC--------Ccccc
Confidence 378998 99999999999886542 2222211 2 2344445532 22344578888754 47888
Q ss_pred EEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcEEEEEEEcCCHHHHHHHHhCCCE
Q 024161 161 VVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEYLVLRAYEDDYGARRLYSNAGYR 240 (271)
Q Consensus 161 ~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y~k~GF~ 240 (271)
++........-.+...+..-..+|+.- .|..+ -==..|+..++-.|+..|++....--..+|+ .|+++++|-
T Consensus 322 F~SFy~lpsTv~~~~~~ktl~aaYlyY-~v~~~----t~~~~lvnDalilak~~gfDVFNAld~meN~---~fl~~LkFg 393 (421)
T KOG2779|consen 322 FCSFYSLPSTVMGNPKYKTLQAAYLYY-NVATS----TPLLQLVNDALILAKQKGFDVFNALDLMENE---SFLKDLKFG 393 (421)
T ss_pred eeeEEeccccccCCCCcceeeeeeEEE-eccCC----ccHHHHHHHHHHHHHhcCCceeehhhhhhhh---hHHHhcCcC
Confidence 888775433212211111112223221 12211 1135788888888999999988776666765 799999998
Q ss_pred EeeccCCcc
Q 024161 241 VVSSDLPWF 249 (271)
Q Consensus 241 ~~~~~~~~~ 249 (271)
.-.-.-+|+
T Consensus 394 ~GdG~l~YY 402 (421)
T KOG2779|consen 394 PGDGNLQYY 402 (421)
T ss_pred cCCCceeEE
Confidence 776655555
No 105
>PHA00432 internal virion protein A
Probab=93.55 E-value=0.51 Score=36.75 Aligned_cols=30 Identities=10% Similarity=0.074 Sum_probs=28.4
Q ss_pred CCcEEEEEEEcCCHHHHHHHHhCCCEEeec
Q 024161 215 GFEYLVLRAYEDDYGARRLYSNAGYRVVSS 244 (271)
Q Consensus 215 g~~~i~l~v~~~N~~A~~~Y~k~GF~~~~~ 244 (271)
.++.++-.|...|..+++|.+.+||+...+
T Consensus 92 ~yp~LwNyV~~~N~~hir~Lk~lGf~f~~e 121 (137)
T PHA00432 92 QYPSLWNYVWVGNKSHIRFLKSIGAVFHNE 121 (137)
T ss_pred hhhhhheeeecCCHHHHHHHHHcCeeeecc
Confidence 489999999999999999999999999888
No 106
>PLN03239 histone acetyltransferase; Provisional
Probab=93.51 E-value=0.3 Score=43.84 Aligned_cols=48 Identities=13% Similarity=-0.004 Sum_probs=36.5
Q ss_pred cEEEEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcC
Q 024161 157 KLVGVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWG 215 (271)
Q Consensus 157 ~iVG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g 215 (271)
.+||+-.=..... ....+.++.|.|.||++|+|+-|++..-+.++..|
T Consensus 199 h~vGYFSKEK~s~-----------~~~NLaCIltLPpyQrkGyG~lLI~fSYeLSr~Eg 246 (351)
T PLN03239 199 HPVGYYSKEKYSD-----------VGYNLACILTFPAHQRKGYGRFLIAFSYELSKKEE 246 (351)
T ss_pred EEEEEeeecccCC-----------CCCceEEEEecChhhhcchhhhhHhhhhHhhhhcC
Confidence 6888876553211 11238999999999999999999999888887655
No 107
>PTZ00064 histone acetyltransferase; Provisional
Probab=93.50 E-value=0.26 Score=46.20 Aligned_cols=49 Identities=12% Similarity=0.105 Sum_probs=37.3
Q ss_pred CcEEEEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcC
Q 024161 156 RKLVGVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWG 215 (271)
Q Consensus 156 ~~iVG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g 215 (271)
-.+||+-.=..... ....+.+|.|.|.||++|+|+-|++..-+..+..|
T Consensus 369 ~HiVGYFSKEK~S~-----------~~nNLACILtLPpyQRKGYGklLIdfSYeLSrrEg 417 (552)
T PTZ00064 369 CHIVGYFSKEKVSL-----------LHYNLACILTLPCYQRKGYGKLLVDLSYKLSLKEG 417 (552)
T ss_pred cEEEEEecccccCc-----------ccCceEEEEecchhhhcchhhhhhhhhhhhhhhcC
Confidence 37888876553211 12238999999999999999999999888887655
No 108
>KOG2535 consensus RNA polymerase II elongator complex, subunit ELP3/histone acetyltransferase [Chromatin structure and dynamics; Transcription]
Probab=93.27 E-value=0.12 Score=46.10 Aligned_cols=49 Identities=27% Similarity=0.441 Sum_probs=41.8
Q ss_pred CccCccHHHHHHHHHHHHHH-HcCCcEEEEEEEcCCHHHHHHHHhCCCEEeec
Q 024161 193 RFRRQKIATALMKACEVLAV-LWGFEYLVLRAYEDDYGARRLYSNAGYRVVSS 244 (271)
Q Consensus 193 ~~RGkGiGs~Ll~~~~~~a~-~~g~~~i~l~v~~~N~~A~~~Y~k~GF~~~~~ 244 (271)
.||-||+|+-||+.++..|+ ++|-.+|.+.. -.+.+++|.|+||+..+-
T Consensus 498 KfQHQG~GtLLmeEAERIAr~EHgS~KiavIS---GVGtR~YY~klGY~LdGP 547 (554)
T KOG2535|consen 498 KFQHQGFGTLLMEEAERIAREEHGSGKIAVIS---GVGTRNYYRKLGYELDGP 547 (554)
T ss_pred hhhhcchhhHHHHHHHHHHHHhcCCCceEEEe---ccchHHHHHhhCeeecCh
Confidence 68999999999999999998 57888887763 455889999999998765
No 109
>PRK14852 hypothetical protein; Provisional
Probab=92.67 E-value=1.8 Score=44.42 Aligned_cols=147 Identities=7% Similarity=0.020 Sum_probs=94.4
Q ss_pred CeEEEEccCCcccHHHHHHHHHHhccCCccccchhhHHhhHHHHHHHHHHHHhcCCCCcceEEEEeeCCCCCCCCCCCcE
Q 024161 79 GWKVRKLVRVGEEMREVAFIQAEAFHNPVALFNDVFFEFFKAEVLSGLLYKLRNSPPDRYACLVAEHSNPNDNIEPQRKL 158 (271)
Q Consensus 79 ~~~IR~at~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Va~~~~~~~~~~~~~~i 158 (271)
...||.|. +.+|..++..+..+++.. .+....- | ...+.+++. ..+....|++-..+ ++
T Consensus 28 r~~~r~Ae-t~~e~~~~~~L~~~~Y~~-~Gy~~~~--p------s~~~~~~~~--~lp~t~~~i~k~~~---------~~ 86 (989)
T PRK14852 28 RPAIKIAE-TPDEYTRAFRLVYEEYIR-SGYLKPH--P------SRMYYNVWS--ILPATSVFIFKSYH---------DV 86 (989)
T ss_pred CcceeecC-CHHHHHHHHHHHHHHHHH-cCCCCcC--c------ccccCCccc--cCCcceEEEeccCC---------cE
Confidence 35689997 799999999998887743 1111100 0 000001111 11223357775544 68
Q ss_pred EEEEEEEeecCC---cc-------ccc-ccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcEEEEEEEcCC
Q 024161 159 VGVVDVTVLRDD---PV-------LQH-LRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEYLVLRAYEDD 227 (271)
Q Consensus 159 VG~~~l~~~~~~---~~-------~~~-~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~~N 227 (271)
+|+..+...... +. +.. ...+...+.+..++++|+.|..-+=-.|++.+..++...+++.+.+.|.+.
T Consensus 87 l~T~t~~~ds~~~Gl~~D~lf~~eLd~lr~~Gr~v~EvtrLa~d~~~~~~~l~~~l~~~~~~y~~~~~~dd~~i~VnPk- 165 (989)
T PRK14852 87 LCTLTHIPDSGLFGLPMDTLYKPEVDALRAQGRNVVEVGALATQYSRRWTNLMVFLAKAMFQYSMMSEVDDILVTVNPK- 165 (989)
T ss_pred EEEEEEecCCcccCcCHHHHHHHHHHHHHHcCCeEEeeehheechhhcccchhHHHHHHHHHHHHHcCCCeEEEEECcc-
Confidence 888877654321 10 000 112557788999999998888776667788887778778999999998554
Q ss_pred HHHHHHHHh-CCCEEeeccCCcc
Q 024161 228 YGARRLYSN-AGYRVVSSDLPWF 249 (271)
Q Consensus 228 ~~A~~~Y~k-~GF~~~~~~~~~~ 249 (271)
=..||++ +||+..++...|.
T Consensus 166 --H~~FY~r~l~f~~ig~~r~~p 186 (989)
T PRK14852 166 --HVKFYTDIFLFKPFGEVRHYD 186 (989)
T ss_pred --hHHHHHHHhCCccccccccCC
Confidence 7899996 5999999876665
No 110
>PLN00104 MYST -like histone acetyltransferase; Provisional
Probab=92.23 E-value=0.29 Score=45.52 Aligned_cols=49 Identities=14% Similarity=0.133 Sum_probs=36.7
Q ss_pred CcEEEEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcC
Q 024161 156 RKLVGVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWG 215 (271)
Q Consensus 156 ~~iVG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g 215 (271)
-.+||+-.-..... ....|.+|.|.|.||++|+|+-|++..-+..+..|
T Consensus 291 ~h~vGyFSKEk~s~-----------~~~NLaCIltlP~yQrkGyG~~LI~~SYeLSr~eg 339 (450)
T PLN00104 291 CHMVGYFSKEKHSE-----------EDYNLACILTLPPYQRKGYGKFLIAFSYELSKREG 339 (450)
T ss_pred cEEEEEecccccCc-----------CCCceEEEEecchhhhcchhheehhheehhhhccC
Confidence 37999876553211 11238999999999999999999998877776554
No 111
>PF11090 DUF2833: Protein of unknown function (DUF2833); InterPro: IPR020335 This entry contains proteins with no known function.
Probab=91.63 E-value=2.1 Score=30.50 Aligned_cols=58 Identities=9% Similarity=-0.005 Sum_probs=38.0
Q ss_pred EEEEEECCCcc-----CccHHHHHHHHHHHHHHHcCCcEEEEEEEcCCHHHHHHHHhCCCEEeec
Q 024161 185 ISGLAVSKRFR-----RQKIATALMKACEVLAVLWGFEYLVLRAYEDDYGARRLYSNAGYRVVSS 244 (271)
Q Consensus 185 i~~l~V~p~~R-----GkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y~k~GF~~~~~ 244 (271)
++.+.++.-++ +.-..+.+...+ +.+.+. ++.++-.|...|..+++|.+.+|++...+
T Consensus 22 ~Wfvtt~~v~~~~~~~~~eF~k~i~~~~-d~~l~~-Y~~l~N~V~~~N~~HIRfLk~lGA~f~~e 84 (86)
T PF11090_consen 22 LWFVTTNKVKSLTKKERREFRKLIKEYL-DKMLKQ-YPVLWNFVWVGNKSHIRFLKSLGAVFHNE 84 (86)
T ss_pred EEEEECcHHhhcCHhhhHHHHHHHHHHH-HHHHHH-hhheeEEEEeCCHHHHHHHHhcCcEEccc
Confidence 45555555442 222333333333 333332 78899999999999999999999996654
No 112
>COG2401 ABC-type ATPase fused to a predicted acetyltransferase domain [General function prediction only]
Probab=91.35 E-value=0.12 Score=47.75 Aligned_cols=63 Identities=10% Similarity=0.116 Sum_probs=47.0
Q ss_pred EEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcEEEEE-----EEcCCHHHHHHHHhCCCEEeecc
Q 024161 183 LYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEYLVLR-----AYEDDYGARRLYSNAGYRVVSSD 245 (271)
Q Consensus 183 ~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~-----v~~~N~~A~~~Y~k~GF~~~~~~ 245 (271)
+.|..+.|+|+||+-|+|..-+..+++|.+++-+..+.-. +..+-..-..|+++.||.-....
T Consensus 242 ariarvvvhpdyr~dglg~~sv~~a~ewI~eRriPEmr~rkHlvetiaqmarynpffe~~gfkylwdt 309 (593)
T COG2401 242 ARIARVVVHPDYRADGLGQLSVIAALEWIIERRIPEMRPRKHLVETIAQMARYNPFFEKVGFKYLWDT 309 (593)
T ss_pred hheeEEEeccccccCccchhHHHHHHHHHHHhhChhhhhhhhHHHHHHHHHhcCchhhhhceeeeeec
Confidence 4599999999999999999999999999998766544322 11121222369999999986653
No 113
>PRK01305 arginyl-tRNA-protein transferase; Provisional
Probab=90.55 E-value=10 Score=32.55 Aligned_cols=59 Identities=22% Similarity=0.158 Sum_probs=47.9
Q ss_pred CcEEEEEEEEeecCCcccccccCCCCeEEEEE--EEECCCccCccHHHHHHHHHHHHHHHcCCcEEEEEEEcCCH
Q 024161 156 RKLVGVVDVTVLRDDPVLQHLRGAEEYLYISG--LAVSKRFRRQKIATALMKACEVLAVLWGFEYLVLRAYEDDY 228 (271)
Q Consensus 156 ~~iVG~~~l~~~~~~~~~~~~~~~~~~~yi~~--l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~ 228 (271)
|++||.+.++... . + |.. .+-+|++-.+++|+-.+-.-+++|++.|.+.++|.-...+-
T Consensus 153 g~LiaVav~D~l~---------d-~----lSAVY~FyDPd~~~~SLG~~~iL~qI~~ak~~gl~y~YLGY~I~~c 213 (240)
T PRK01305 153 GKLVAVAVTDVLD---------D-G----LSAVYTFYDPDEEHRSLGTFAILWQIELAKRLGLPYVYLGYWIKGS 213 (240)
T ss_pred CeEEEEEEEeccC---------C-c----eeeEEEeeCCCccccCCHHHHHHHHHHHHHHcCCCeEeeeEEECCC
Confidence 4999999998632 1 1 233 34699999999999999999999999999999999877654
No 114
>PF04377 ATE_C: Arginine-tRNA-protein transferase, C terminus; InterPro: IPR007472 Arginine-tRNA-protein transferase catalyses the post-translational conjugation of arginine to the N terminus of a protein. In eukaryotes, this functions as part of the N terminus rule pathway of protein degradation by conjugating a destabilising amino acid to the N-terminal aspartate or glutamate of a protein, targeting the protein for ubiquitin-dependent proteolysis. N-terminal cysteine is sometimes modified []. In Saccharomyces cerevisiae, Cys20, 23, 94 and/or 95 are thought to be important for activity []. Of these, only Cys 94 appears to be completely conserved in this family. This entry represents the C-terminal region of the enzyme arginine-tRNA-protein transferase, found in both eukaryotic and prokaryotic enzymes.; GO: 0004057 arginyltransferase activity, 0016598 protein arginylation
Probab=89.57 E-value=5.4 Score=30.77 Aligned_cols=61 Identities=18% Similarity=0.181 Sum_probs=46.6
Q ss_pred CcEEEEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcEEEEEEEcCCH
Q 024161 156 RKLVGVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEYLVLRAYEDDY 228 (271)
Q Consensus 156 ~~iVG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~ 228 (271)
+++||.+.++... .+-. -+. .+-+|++..+.+|+-.+-.-+++|++.|.+.+++.-...+-
T Consensus 48 ~kLiav~v~D~l~---------~glS--aVY-~fyDPd~~~~SlG~~~iL~eI~~a~~~~l~y~YLGY~I~~c 108 (128)
T PF04377_consen 48 GKLIAVAVVDILP---------DGLS--AVY-TFYDPDYSKRSLGTYSILREIELARELGLPYYYLGYWIHGC 108 (128)
T ss_pred CeEEEEEEeeccc---------chhh--hee-eeeCCCccccCcHHHHHHHHHHHHHHcCCCEEeeCeEeCCC
Confidence 3999999998632 1100 022 23599999999999999999999999999999988666543
No 115
>PF04339 DUF482: Protein of unknown function, DUF482; InterPro: IPR007434 This family contains several proteins of uncharacterised function.
Probab=89.32 E-value=4.8 Score=36.90 Aligned_cols=132 Identities=14% Similarity=0.155 Sum_probs=79.1
Q ss_pred ecCCCeEEEEccC---CcccHHHHHHHHHHhccCCccccchhhHHhhHHHHHHHHHHHHhcCCCCcceEEEEeeCCCCCC
Q 024161 75 VSEYGWKVRKLVR---VGEEMREVAFIQAEAFHNPVALFNDVFFEFFKAEVLSGLLYKLRNSPPDRYACLVAEHSNPNDN 151 (271)
Q Consensus 75 ~~~~~~~IR~at~---~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Va~~~~~~~~ 151 (271)
....|++|+..+. +++|++.+..++...+....+ .+....++.+.+... .++...+++|..++
T Consensus 195 v~~~Gi~~~~l~G~~i~~~~~~~f~~~Y~~Ty~k~~~------~~yLt~~FF~~l~~~----m~~~~~l~~A~~~g---- 260 (370)
T PF04339_consen 195 VAEQGIRIRTLTGDEITDEDWDRFYRLYQNTYAKRWG------RPYLTREFFEQLAET----MPEQVVLVVARRDG---- 260 (370)
T ss_pred HHHcCCEEEEEeCCCCCHHHHHHHHHHHHHHHHhhCC------ChhhcHHHHHHHHHh----CcCCEEEEEEEECC----
Confidence 3467889988762 355677777787777654322 111222233333333 44566677788776
Q ss_pred CCCCCcEEEEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcEEEEEEEcCCHHHH
Q 024161 152 IEPQRKLVGVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEYLVLRAYEDDYGAR 231 (271)
Q Consensus 152 ~~~~~~iVG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~ 231 (271)
++||++..-... +.+|---.+...++.+.-. ....=..+++|.++|++++...+--. .
T Consensus 261 -----~~Va~aL~l~~~------------~~LyGRYwG~~~~~~~LHF-e~cYYq~Ie~aI~~Gl~~f~~GaqGE----H 318 (370)
T PF04339_consen 261 -----QPVAFALCLRGD------------DTLYGRYWGCDEEIPFLHF-ELCYYQGIEYAIEHGLRRFEPGAQGE----H 318 (370)
T ss_pred -----eEEEEEEEEEeC------------CEEEEeeecccccccCcch-HHHHHHHHHHHHHcCCCEEECCcchh----H
Confidence 999999877532 3333333344555554442 23344689999999999876663322 1
Q ss_pred HHHHhCCCEEeec
Q 024161 232 RLYSNAGYRVVSS 244 (271)
Q Consensus 232 ~~Y~k~GF~~~~~ 244 (271)
+ -..||+.+.+
T Consensus 319 K--~~RGf~P~~t 329 (370)
T PF04339_consen 319 K--IARGFEPVPT 329 (370)
T ss_pred H--HHcCCccccc
Confidence 2 4679998877
No 116
>COG5630 ARG2 Acetylglutamate synthase [Amino acid transport and metabolism]
Probab=89.19 E-value=2 Score=38.95 Aligned_cols=84 Identities=13% Similarity=0.152 Sum_probs=56.1
Q ss_pred cHHHHHHHHHHhccCCccccchhhHHhhHHHHHHHHHHHHhcCCCCcceEEEEeeCCCCCCCCCCCcEEEEEEEEeecCC
Q 024161 91 EMREVAFIQAEAFHNPVALFNDVFFEFFKAEVLSGLLYKLRNSPPDRYACLVAEHSNPNDNIEPQRKLVGVVDVTVLRDD 170 (271)
Q Consensus 91 D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Va~~~~~~~~~~~~~~iVG~~~l~~~~~~ 170 (271)
|++.+..++..+|.-. + ..+.+..++.. +-...+|++ .--|.+.++...
T Consensus 346 dl~r~q~LI~~SFkRT--L------------d~h~y~~r~~~---~La~~iVsg------------dY~g~aIlTyeg-- 394 (495)
T COG5630 346 DLPRLQHLIQSSFKRT--L------------DPHYYETRINT---PLARAIVSG------------DYRGAAILTYEG-- 394 (495)
T ss_pred CcHHHHHHHHHHHhhc--c------------CHHHHHHhccC---cceeEEeec------------cceeeEEEEeec--
Confidence 7888999999888531 1 12334445543 222344443 355888887642
Q ss_pred cccccccCCCCeEEEEEEEECCCccC-ccHHHHHHHHHHHHH
Q 024161 171 PVLQHLRGAEEYLYISGLAVSKRFRR-QKIATALMKACEVLA 211 (271)
Q Consensus 171 ~~~~~~~~~~~~~yi~~l~V~p~~RG-kGiGs~Ll~~~~~~a 211 (271)
.....+.|+..++|.++.+| -||+..+..-+.+.-
T Consensus 395 ------s~~~~vpYLDKfAVl~~aQGs~gisd~vfniM~e~f 430 (495)
T COG5630 395 ------SGENNVPYLDKFAVLDDAQGSEGISDAVFNIMREEF 430 (495)
T ss_pred ------cCCCCCcceeeeeccccccccchHHHHHHHHHHHhC
Confidence 12246789999999999999 999999988776554
No 117
>cd04266 DUF619-NAGS-FABP DUF619 domain of N-acetylglutamate Synthase of the fungal arginine-biosynthetic pathway. DUF619-NAGS-FABP: This family includes the DUF619 domain of N-acetylglutamate synthase (NAGS) of the fungal arginine-biosynthetic pathway (FABP). This NAGS (also known as arginine-requiring protein 2 or ARG2) consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. NAGS catalyzes the formation of NAG from acetylcoenzyme A and L-glutamate. The DUF619 domain, yet to be characterized, is predicted to function in NAGS association in fungi.
Probab=87.62 E-value=6.2 Score=29.51 Aligned_cols=49 Identities=29% Similarity=0.412 Sum_probs=37.9
Q ss_pred CCeEEEEEEEECCCccC-ccHHHHHHHHHHHHHHHcCCcE-EEEEEEcCCHHHHHHH
Q 024161 180 EEYLYISGLAVSKRFRR-QKIATALMKACEVLAVLWGFEY-LVLRAYEDDYGARRLY 234 (271)
Q Consensus 180 ~~~~yi~~l~V~p~~RG-kGiGs~Ll~~~~~~a~~~g~~~-i~l~v~~~N~~A~~~Y 234 (271)
....||..++|.+..|| .|++..+.+++.+ .+.+ +.-.+.++|+. .+.|
T Consensus 37 ~~v~yLdKFav~~~~~gl~gv~D~vf~~m~~-----~fp~~L~Wrsr~~n~~-n~Wy 87 (108)
T cd04266 37 EKIAYLDKFAVLPKAQGSDGIADILFNAMLD-----GFPNELIWRSRKDNPV-NKWY 87 (108)
T ss_pred CCceEEEEEEEccccccccchHHHHHHHHHH-----cCCCceEEEeCCCCcc-cceE
Confidence 57789999999999997 8999999998865 3444 66677777763 3444
No 118
>KOG2779 consensus N-myristoyl transferase [Lipid transport and metabolism]
Probab=87.01 E-value=6.9 Score=35.34 Aligned_cols=56 Identities=21% Similarity=0.288 Sum_probs=41.4
Q ss_pred CcEEEEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcC
Q 024161 156 RKLVGVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWG 215 (271)
Q Consensus 156 ~~iVG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g 215 (271)
+++|||+...+.. .+.....-+...|..+||+++.|+++++=-|++.+.+.+.-.|
T Consensus 145 ~kLVaFIsaiP~~----irvrdk~vk~veINFLCVHKkLRSKRlaPvLIrEITRRvnl~g 200 (421)
T KOG2779|consen 145 KKLVAFISAIPAT----IRVRDKVVKMVEINFLCVHKKLRSKRLAPVLIREITRRVNLEG 200 (421)
T ss_pred CceEEEEeccccE----EEEccceeeeeeEEEEEEehhhhccccccHHHHHHHHHhhhhh
Confidence 5899999765422 1111122356779999999999999999999999988886555
No 119
>KOG2747 consensus Histone acetyltransferase (MYST family) [Chromatin structure and dynamics]
Probab=86.52 E-value=1.5 Score=40.19 Aligned_cols=31 Identities=10% Similarity=0.064 Sum_probs=26.7
Q ss_pred EEEEEEECCCccCccHHHHHHHHHHHHHHHc
Q 024161 184 YISGLAVSKRFRRQKIATALMKACEVLAVLW 214 (271)
Q Consensus 184 yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~ 214 (271)
.+..+-|.|.||++|+|+-|++..-+..+..
T Consensus 262 NlaCILtLPpyQRkGYGklLIdFSYeLSr~E 292 (396)
T KOG2747|consen 262 NLACILTLPPYQRKGYGKLLIDFSYELSRRE 292 (396)
T ss_pred ceeeeeecChhhhcccchhhhhhhhhhhccc
Confidence 3889999999999999999999877766543
No 120
>PF13444 Acetyltransf_5: Acetyltransferase (GNAT) domain
Probab=86.10 E-value=2.5 Score=30.89 Aligned_cols=48 Identities=27% Similarity=0.328 Sum_probs=33.0
Q ss_pred cEEEEEEEEeecCCc----c-------ccc-ccCCCCeEEEEEEEECCCccCccHHHHHH
Q 024161 157 KLVGVVDVTVLRDDP----V-------LQH-LRGAEEYLYISGLAVSKRFRRQKIATALM 204 (271)
Q Consensus 157 ~iVG~~~l~~~~~~~----~-------~~~-~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll 204 (271)
++||++.+....... . ... .+.....+.+..++|+|+||++.....|.
T Consensus 41 ~~VGt~Rl~~~~~~~~~~~~~~~~~f~l~~~~~~~~~~~EisRl~V~~~~R~~~~~~~L~ 100 (101)
T PF13444_consen 41 EVVGTVRLILPSPAGPLEGFYSESEFDLDPLLPLPRRVAEISRLCVHPEYRRRKVLLLLW 100 (101)
T ss_pred CEEEEEEeeccccccccccCCchhhcCcchhhccCCcEEEeehheECHhHCCChHHHHHh
Confidence 599999877544321 0 001 11234788999999999999998877764
No 121
>KOG4601 consensus Uncharacterized conserved protein [Function unknown]
Probab=85.46 E-value=1.7 Score=36.69 Aligned_cols=58 Identities=16% Similarity=0.001 Sum_probs=40.2
Q ss_pred CCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcEEEEEEEcCCHHHHHHHHhC-CCE
Q 024161 180 EEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEYLVLRAYEDDYGARRLYSNA-GYR 240 (271)
Q Consensus 180 ~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y~k~-GF~ 240 (271)
.+...|.+++|++..|++|.|.+|+++.++. .+.+--.+.+..-...-..|.+|+ |.+
T Consensus 106 ~e~lcILDFyVheS~QR~G~G~~lfdyMl~k---E~vephQ~a~DrPS~kLl~Fm~khYgl~ 164 (264)
T KOG4601|consen 106 EEALCILDFYVHESEQRSGNGFKLFDYMLKK---ENVEPHQCAFDRPSAKLLQFMEKHYGLK 164 (264)
T ss_pred cCCceEEEEEeehhhhhcCchHHHHHHHHHh---cCCCchheeccChHHHHHHHHHHhcCcc
Confidence 3556699999999999999999999998654 454444444443333456777654 544
No 122
>PF11124 Pho86: Inorganic phosphate transporter Pho86; InterPro: IPR024297 Pho86p is an ER protein which is produced in response to phosphate starvation. It is essential for growth when phosphate levels are limiting []. Pho86p is also involved in the regulation of Pho84p, a high-affinity phosphate transporter, which is localised to the endoplasmic reticulum (ER) in low phosphate medium. When the level of phosphate increases Pho84p is transported to the vacuole. Pho86p is required for packaging of Pho84p in to COPII vesicles [].
Probab=84.09 E-value=10 Score=33.61 Aligned_cols=83 Identities=17% Similarity=0.285 Sum_probs=62.4
Q ss_pred cEEEEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHc---------C-CcEEEEEEEcC
Q 024161 157 KLVGVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLW---------G-FEYLVLRAYED 226 (271)
Q Consensus 157 ~iVG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~---------g-~~~i~l~v~~~ 226 (271)
.+|+.+.+.+..... ....=..-|.++.|+.-|..-|+=.-|+++++-.+++. | -=.+.+++...
T Consensus 179 tPIAiisl~~~~~~S-----t~~~~vv~ItgigvRkVy~Ksgi~e~LidWA~~Rtr~l~~ey~k~k~~~si~ll~d~YSF 253 (304)
T PF11124_consen 179 TPIAIISLVPNKDQS-----TKENFVVKITGIGVRKVYVKSGIDEDLIDWAMLRTRQLYKEYLKGKKGCSIKLLVDVYSF 253 (304)
T ss_pred CceEEEEeccccccC-----CCceEEEEEeeeEEEEEEeecChHHHHHHHHHHHHHHHHHHhccccccceEEEEEEeeec
Confidence 689999888643211 11123466899999999999999999999998777652 1 12455677777
Q ss_pred CHHHHHHHHhCCCEEeec
Q 024161 227 DYGARRLYSNAGYRVVSS 244 (271)
Q Consensus 227 N~~A~~~Y~k~GF~~~~~ 244 (271)
...-++++++.||..+..
T Consensus 254 D~~~~k~L~~~gF~~i~s 271 (304)
T PF11124_consen 254 DKDMKKTLKKKGFKKISS 271 (304)
T ss_pred cHHHHHHHHHCCCeeeec
Confidence 788999999999999983
No 123
>PF09924 DUF2156: Uncharacterized conserved protein (DUF2156); InterPro: IPR024320 This domain of unknown function is found in uncharacterised proteins and in Lysylphosphatidylglycerol synthetase, which catalyses the transfer of a lysyl group from L-lysyl-tRNA(Lys) to membrane-bound phosphatidylglycerol [].; PDB: 2HQY_A.
Probab=83.97 E-value=27 Score=30.69 Aligned_cols=116 Identities=18% Similarity=0.059 Sum_probs=60.1
Q ss_pred CCeEEEEccC-CcccHHHHHHHHHHhccCCccccchhhHHhhHHHHHHHHHHHHhcCCCCcceEEEEee-CCCCCCCCCC
Q 024161 78 YGWKVRKLVR-VGEEMREVAFIQAEAFHNPVALFNDVFFEFFKAEVLSGLLYKLRNSPPDRYACLVAEH-SNPNDNIEPQ 155 (271)
Q Consensus 78 ~~~~IR~at~-~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Va~~-~~~~~~~~~~ 155 (271)
..+++++... ++++.++|.++..+..... . ..+ .......+...- . ....++|+.. ++
T Consensus 131 ~~~~~~~~~~~~~~~~~el~~i~~~W~~~~-~-~~e------~~~~~~~~~~~~-~---~~~~~~~~~~~dg-------- 190 (299)
T PF09924_consen 131 YTFEVVPIPELDPELRDELLEISDEWLKEK-E-RPE------RGFIMGALEHFD-E---LGLRGFVARVADG-------- 190 (299)
T ss_dssp -T-EEEE-----GGGHHHHHHHHHHHHHHC-T-HHH------HHHHHHHHHTHH-H---HT-EEEEEEE-TT--------
T ss_pred eEEEEEECCCCCHHHHHHHHHHHHHHHhcC-c-hhH------HHHHhccccchh-h---cCceEEEEEECCC--------
Confidence 4477777721 2788888888865543321 1 000 011111222111 1 1335777877 65
Q ss_pred CcEEEEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcEEEEEEEc
Q 024161 156 RKLVGVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEYLVLRAYE 225 (271)
Q Consensus 156 ~~iVG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~ 225 (271)
+|+|++...+.. . .+.+.++-.--+++ -=+|+...|+..+++.+.+.|++.+.|...+
T Consensus 191 -ki~af~~~~~~~---------~-~~~~~~~~~k~~~~-a~~G~~e~l~~~~~~~~~~~g~~~lnLg~ap 248 (299)
T PF09924_consen 191 -KIVAFAIGSPLG---------G-RDGWSIDFEKADPD-APKGIYEFLNVEFAEHLKAEGVEYLNLGFAP 248 (299)
T ss_dssp -EEEEEEEEEEEE-----------TTEEEEEEEEE-TT--STTHHHHHHHHHHHHS--TT--EEE-----
T ss_pred -cEEEEEEEEEcc---------C-CccEEEEEEecCCC-CCCcHHHHHHHHHHHhhhhCCceEEEccccc
Confidence 999999998643 1 23333444444555 5689999999999999999999999876554
No 124
>KOG2696 consensus Histone acetyltransferase type b catalytic subunit [Chromatin structure and dynamics]
Probab=80.25 E-value=15 Score=33.43 Aligned_cols=85 Identities=13% Similarity=0.026 Sum_probs=49.0
Q ss_pred CCCcceEEEEeeCCCCCCCCCCCcEEEEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHH
Q 024161 134 PPDRYACLVAEHSNPNDNIEPQRKLVGVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVL 213 (271)
Q Consensus 134 ~~~~~~~~Va~~~~~~~~~~~~~~iVG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~ 213 (271)
++....+++.+.......+ .=.++|+..+.....-+.. -+ .-|..+-+.|.||++|+|+.|++++......
T Consensus 178 de~w~~~lv~EK~~~d~~~--ly~~~gy~tiyk~y~yid~---~R----~RiSQmlilpPfq~~Glgs~l~E~i~r~~~~ 248 (403)
T KOG2696|consen 178 DECWLIYLVYEKKEEDGDT--LYAYVGYYTIYKFYEYIDR---IR----PRISQMLILPPFQGKGLGSQLYEAIARDYLE 248 (403)
T ss_pred CCceEEEEeeeecccCCce--eEeeeeeEEEeehhhhhhh---hh----hhhheeEEeccccCCchHHHHHHHHHHhhcc
Confidence 4445566776654211100 1135666665543221111 11 2288899999999999999999999754433
Q ss_pred cCCcEEEEEEEcCCH
Q 024161 214 WGFEYLVLRAYEDDY 228 (271)
Q Consensus 214 ~g~~~i~l~v~~~N~ 228 (271)
.-.-+.++|...++
T Consensus 249 -~p~v~DiTVEdPse 262 (403)
T KOG2696|consen 249 -EPTVLDITVEDPSE 262 (403)
T ss_pred -CCceeEEEecCchH
Confidence 23456666665444
No 125
>COG5027 SAS2 Histone acetyltransferase (MYST family) [Chromatin structure and dynamics]
Probab=76.70 E-value=1.6 Score=39.12 Aligned_cols=56 Identities=14% Similarity=0.180 Sum_probs=36.0
Q ss_pred CcceEEEEeeCCCCCCCCCCCcEEEEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHH
Q 024161 136 DRYACLVAEHSNPNDNIEPQRKLVGVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKAC 207 (271)
Q Consensus 136 ~~~~~~Va~~~~~~~~~~~~~~iVG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~ 207 (271)
+.|.++|....++. +=++||+-.=.... ..-..+.++-|.|.||++|+|+-|++..
T Consensus 232 DpflFYvl~~~~~~-----~~h~vGyFSKEK~S-----------~~~yNLaCILtLP~yQRrGYG~lLIdFS 287 (395)
T COG5027 232 DPFLFYVLTERGDT-----GCHLVGYFSKEKES-----------EQDYNLACILTLPPYQRRGYGKLLIDFS 287 (395)
T ss_pred cceEEEEEEEcCCc-----ceeeeeeechhhcc-----------cccCceEEEEecChhHhcccceEeeeee
Confidence 34556665444311 11477876544321 1223489999999999999999998864
No 126
>KOG2036 consensus Predicted P-loop ATPase fused to an acetyltransferase [General function prediction only]
Probab=71.60 E-value=3.7 Score=40.44 Aligned_cols=29 Identities=10% Similarity=0.097 Sum_probs=25.5
Q ss_pred EEEEEEECCCccCccHHHHHHHHHHHHHH
Q 024161 184 YISGLAVSKRFRRQKIATALMKACEVLAV 212 (271)
Q Consensus 184 yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~ 212 (271)
.|..++|+|+|++.|+|++.++-+.++..
T Consensus 616 RIVRIAvhP~y~~MGYGsrAvqLL~~y~e 644 (1011)
T KOG2036|consen 616 RIVRIAVHPEYQKMGYGSRAVQLLTDYFE 644 (1011)
T ss_pred eEEEEEeccchhccCccHHHHHHHHHHHh
Confidence 48999999999999999999988776653
No 127
>PHA02769 hypothetical protein; Provisional
Probab=69.44 E-value=8 Score=29.07 Aligned_cols=44 Identities=30% Similarity=0.440 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHH---HHcCCcEEEEEEEcCCHHHHHHHHhCCCEEeecc
Q 024161 200 ATALMKACEVLA---VLWGFEYLVLRAYEDDYGARRLYSNAGYRVVSSD 245 (271)
Q Consensus 200 Gs~Ll~~~~~~a---~~~g~~~i~l~v~~~N~~A~~~Y~k~GF~~~~~~ 245 (271)
|..|++.+...+ +..|++.++---.++. +.++|.|.||+.++..
T Consensus 94 gd~lvnfl~~l~~k~~~dg~evlwtlgfpdh--snaly~kagfk~vg~t 140 (154)
T PHA02769 94 GDHLVNFLNDLAEKLKKDGFEVLWTLGFPDH--SNALYKKAGFKLVGQT 140 (154)
T ss_pred hHHHHHHHHHHHHHHhcCCeEEEEEecCCCc--chhHHhhhhhhHhccc
Confidence 566777766555 4568876665544432 6789999999999884
No 128
>PRK04531 acetylglutamate kinase; Provisional
Probab=65.59 E-value=45 Score=30.94 Aligned_cols=55 Identities=16% Similarity=0.213 Sum_probs=40.3
Q ss_pred CeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcEEEEEEEcCCHHHHHHH-HhC-CCEE
Q 024161 181 EYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEYLVLRAYEDDYGARRLY-SNA-GYRV 241 (271)
Q Consensus 181 ~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y-~k~-GF~~ 241 (271)
...|+..++|.+..||.|++..+.+++.+.. +.+...+.++|+. .++| +|. |+-.
T Consensus 309 ~~~~Ldkf~v~~~~~~~~v~d~vf~~~~~~~-----~~L~Wrsr~~n~~-~~Wyf~~s~G~~~ 365 (398)
T PRK04531 309 GGPYLDKFAVLDDARGEGLGRAVWNVMREET-----PQLFWRSRHNNTI-NKFYYAESDGCIK 365 (398)
T ss_pred CceEeEEEEEccchhhcChHHHHHHHHHhhC-----CceEEEcCCCCCc-cceeeecccceEe
Confidence 5678999999999999999999999875443 4577777777773 3444 333 5444
No 129
>PF02388 FemAB: FemAB family; InterPro: IPR003447 The femAB operon codes for two nearly identical approximately 50kDa proteins involved in the formation of the Staphylococcal pentaglycine interpeptide bridge in peptidoglycan []. These proteins are also considered as a factor influencing the level of methicillin resistance [].; GO: 0016755 transferase activity, transferring amino-acyl groups; PDB: 1XE4_A 1NE9_A 3GKR_A 1XIX_A 1P4N_A 1XF8_A 1LRZ_A.
Probab=64.16 E-value=68 Score=29.79 Aligned_cols=101 Identities=11% Similarity=0.036 Sum_probs=58.3
Q ss_pred CcEEEEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcEEEEEE------------
Q 024161 156 RKLVGVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEYLVLRA------------ 223 (271)
Q Consensus 156 ~~iVG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v------------ 223 (271)
+.|++.+.+.... +.....++|+...-|. +|...-+-..+++.+.+.+++.++-.|.++-
T Consensus 45 ~~v~aa~ll~~~~-------~~~g~~~~yiprGPv~-d~~d~ell~~f~~~Lk~~akk~~a~~lridP~~~~~~~~~~g~ 116 (406)
T PF02388_consen 45 GEVAAAALLLRKK-------PFKGFKYAYIPRGPVM-DYSDEELLEFFLEELKKYAKKKRALFLRIDPNVIYQERDEDGE 116 (406)
T ss_dssp S-EEEEEEEEEEE-------CTTTCEEEEETT--EC--TT-HHHHHHHHHHHHHHHCTTTEEEEEE--S-EEECE-TTS-
T ss_pred CeEEEEEEEEEec-------cCCceeEEEECCCCCC-CCCCHHHHHHHHHHHHHHHHHCCEEEEEEeCchhhhhcccccc
Confidence 4777777655432 1112345666554433 7778888888999999999886643333211
Q ss_pred ---EcCCHHHHHHHHhCCCEEeeccCCccccccCccceEEEEEecCC
Q 024161 224 ---YEDDYGARRLYSNAGYRVVSSDLPWFSTWIGRKRRVLMIKRSDH 267 (271)
Q Consensus 224 ---~~~N~~A~~~Y~k~GF~~~~~~~~~~~~~~~~~~~~~m~K~l~~ 267 (271)
...|...+..++++||...+....|. .....+..|.+.|..
T Consensus 117 ~~~~~~~~~~~~~l~~~G~~~~g~~~~~~---~~~qpr~~~v~dL~~ 160 (406)
T PF02388_consen 117 PIEGEENDELIENLKALGFRHQGFTKGYD---DTIQPRWTYVKDLTG 160 (406)
T ss_dssp EEEE-S-THHHHHHHHTT-CCTS-SSSTT---SSSS-SEEEEEEGCC
T ss_pred cccCcchHHHHHHHHhcCceecCcccCCC---cccCccEEEEEECCC
Confidence 23467789999999999988866554 113456777787765
No 130
>COG2935 Putative arginyl-tRNA:protein arginylyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=63.01 E-value=63 Score=27.84 Aligned_cols=63 Identities=17% Similarity=0.142 Sum_probs=49.0
Q ss_pred CCCcEEEEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcEEEEEEEcCCH
Q 024161 154 PQRKLVGVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEYLVLRAYEDDY 228 (271)
Q Consensus 154 ~~~~iVG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~ 228 (271)
.+|++|+.+..+.. +.+-. ..-.+-+|++..+.+|+-.+-.=+.+|.+.|...++|.-...+-
T Consensus 158 ~~G~LvAVavtDvL---------~dGlS---sVY~FydPd~s~~SLGt~~iL~~I~~aq~~~l~yvYLGYwI~~c 220 (253)
T COG2935 158 GEGKLVAVAVTDVL---------PDGLS---SVYTFYDPDMSKRSLGTLSILDQIAIAQRLGLPYVYLGYWIKGC 220 (253)
T ss_pred CCCcEEEEEeeecc---------cCcce---eEEEEeCCChhhhcchHHHHHHHHHHHHHhCCCeEEEEEEECCc
Confidence 36799999988863 22211 11234699999999999999999999999999999999887644
No 131
>cd03173 DUF619-like DUF619 domain of various N-acetylglutamate Kinases and N-acetylglutamate Synthases. DUF619-like: This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. This subgroup also includes the DUF619 domain of the FABP N-acetylglutamate kinase (NAGK), the enzyme that catalyzes the second reaction of arginine
Probab=62.12 E-value=60 Score=23.77 Aligned_cols=44 Identities=20% Similarity=0.311 Sum_probs=35.9
Q ss_pred CCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcEEEEEEEcCCH
Q 024161 180 EEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEYLVLRAYEDDY 228 (271)
Q Consensus 180 ~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~ 228 (271)
....||..++|.+.-++.|++..+.+++.+. ++.+.-.+.++|+
T Consensus 31 ~~v~~LdkFav~~~~~~~gv~D~vf~~i~~d-----~~~L~Wrsr~~n~ 74 (98)
T cd03173 31 NSIPYLDKFAVSDHLWLNNVTDNIFNLIRKD-----FPSLLWRVRENDA 74 (98)
T ss_pred CCCEEEEEEEEcccccccCHHHHHHHHHHhh-----CCeeEEEeCCCCC
Confidence 3677899999999999999999999987443 4567777777776
No 132
>PF09390 DUF1999: Protein of unknown function (DUF1999); InterPro: IPR018987 This family contains a putative Fe-S binding reductase (Q72J89 from SWISSPROT) whose structure adopts an alpha and beta fold. ; PDB: 2D4O_A 2D4P_A.
Probab=62.05 E-value=77 Score=25.00 Aligned_cols=133 Identities=15% Similarity=0.195 Sum_probs=66.0
Q ss_pred EEEEccCCcccHHHHHHHHHHhccCCccccchh-------hHHhhHHHHHHHHHHHHhcCCCCcceEEEEeeCCCCCCCC
Q 024161 81 KVRKLVRVGEEMREVAFIQAEAFHNPVALFNDV-------FFEFFKAEVLSGLLYKLRNSPPDRYACLVAEHSNPNDNIE 153 (271)
Q Consensus 81 ~IR~at~~~~D~~~i~~l~~~~f~~~~~~~~~~-------~~~~~~~~~~~~l~~~~~~~~~~~~~~~Va~~~~~~~~~~ 153 (271)
.+|+.+ +.|++++..+-...-+...+-++.+ ..+. ....++. +..+ . +.|||+..+
T Consensus 2 ~yR~f~--e~D~~aL~ald~a~qr~~dP~fd~lperer~gr~~t----Sl~Alrf-y~Rs---g-HSFvA~~e~------ 64 (161)
T PF09390_consen 2 RYRPFT--EPDFAALQALDLAAQRRTDPAFDGLPEREREGRLST----SLAALRF-YERS---G-HSFVAEDEG------ 64 (161)
T ss_dssp EEE-----GGGHHHHHHC--------------------STTS-------HHHHHH-HHCC---S---EEEE-ET------
T ss_pred cccccC--cccHHHHHHHhhhccccccccccccccccccccccC----CHHHhhh-hhcc---C-CcEEEEccC------
Confidence 578887 9999999887444332211111100 0111 1122222 2221 2 478998443
Q ss_pred CCCcEEEEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcEEEEEEEcCCHHHHHH
Q 024161 154 PQRKLVGVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEYLVLRAYEDDYGARRL 233 (271)
Q Consensus 154 ~~~~iVG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~ 233 (271)
+++.|++...... .+.....++-.+.+.| -+......-||.++...|-+.|.-.+.+.+.+. ...-
T Consensus 65 --~~~~GfvLAQaVW--------QGdrptVlV~ri~~~~-~~~~~~~~GLLrAvvKSAYDa~VYEv~l~l~p~---l~~A 130 (161)
T PF09390_consen 65 --GELQGFVLAQAVW--------QGDRPTVLVRRILLAP-GEPEEVYEGLLRAVVKSAYDAGVYEVHLHLDPE---LEAA 130 (161)
T ss_dssp --TEEEEEEEEEEEE---------SSSEEEEEEEE---E-ESSHHHHHHHHHHHHHHHHHTT-SEEEE---TH---HHHH
T ss_pred --CceeeeeehhHHh--------cCCCceEEEEEeecCC-CCcHHHHHHHHHHHHHhhhccceEEEEeeCCHH---HHHH
Confidence 3999999876421 2223455566665544 455789999999999999999998999998873 5666
Q ss_pred HHhCCCEEeec
Q 024161 234 YSNAGYRVVSS 244 (271)
Q Consensus 234 Y~k~GF~~~~~ 244 (271)
.+..||...+.
T Consensus 131 ~~a~~~~~~~~ 141 (161)
T PF09390_consen 131 ARAEGFRLGGQ 141 (161)
T ss_dssp HHHTT----S-
T ss_pred HhhcccccCCe
Confidence 77888886653
No 133
>COG5092 NMT1 N-myristoyl transferase [Lipid metabolism]
Probab=59.74 E-value=99 Score=27.74 Aligned_cols=114 Identities=15% Similarity=0.180 Sum_probs=65.9
Q ss_pred EEEEccCCcccHHHHHHHHHHhccCCccccchhhHHhhHHHHHHHHHHHHhcCCC--CcceEEEEeeCCCCCCCCCCCcE
Q 024161 81 KVRKLVRVGEEMREVAFIQAEAFHNPVALFNDVFFEFFKAEVLSGLLYKLRNSPP--DRYACLVAEHSNPNDNIEPQRKL 158 (271)
Q Consensus 81 ~IR~at~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~Va~~~~~~~~~~~~~~i 158 (271)
.|-.+ +...+..+..++.+.+-++ .+..+.+. ....+.+|.-..+. .++ +++....+ +.++
T Consensus 83 ~idv~--N~~ql~dv~~lL~eNYVED--~~ag~rf~-----Y~~EFl~Wal~~pg~kK~w-higvRvk~-------t~kl 145 (451)
T COG5092 83 VIDVA--NKKQLEDVFVLLEENYVED--IYAGHRFR-----YSVEFLQWALDGPGGKKRW-HIGVRVKG-------TQKL 145 (451)
T ss_pred eEecc--ccchhHHHHHHHHhhhhhh--hhhhhHHH-----HHHHHHHHhhcCCCCceee-EEEEEEcc-------ccee
Confidence 34444 4778888888888776542 11112121 22334444432111 122 33333333 3589
Q ss_pred EEEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcC
Q 024161 159 VGVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWG 215 (271)
Q Consensus 159 VG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g 215 (271)
||++...+..-.--+ .......+..++|+.+.|++.+.--|++.+.+.|...|
T Consensus 146 VaFIsa~p~~v~vRg----K~~~~~evNFLCihk~lRsKRltPvLIkEiTRR~n~~~ 198 (451)
T COG5092 146 VAFISAKPHLVSVRG----KRSSVLEVNFLCIHKELRSKRLTPVLIKEITRRANVDG 198 (451)
T ss_pred EEEEecceeEEEEcc----cccccceEEEEEEehhhhhCccchHHHHHHHHhhhhhh
Confidence 999965432110011 11245668999999999999999999999988886554
No 134
>COG5092 NMT1 N-myristoyl transferase [Lipid metabolism]
Probab=57.08 E-value=1.4e+02 Score=26.90 Aligned_cols=147 Identities=15% Similarity=0.154 Sum_probs=74.2
Q ss_pred EEEEccCCcccHHHHHHHHHHhccCCccccchhhHHhhHHHHHHHHHHHHhc--CCCC--cceEEEEeeCCCCCCCCCCC
Q 024161 81 KVRKLVRVGEEMREVAFIQAEAFHNPVALFNDVFFEFFKAEVLSGLLYKLRN--SPPD--RYACLVAEHSNPNDNIEPQR 156 (271)
Q Consensus 81 ~IR~at~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~--~~~~~Va~~~~~~~~~~~~~ 156 (271)
-+|++. ..|+++++.++.+.... ..++ . .-..+++.+.+.- +..+ ....+|.+..+ |
T Consensus 260 GlR~~e--~kD~~~v~~L~~~y~~R-fel~-----~---~f~~Eei~h~F~~~~~v~~~~v~~syvVe~p~--------g 320 (451)
T COG5092 260 GLRLAE--EKDMEDVARLYLEYSRR-FELY-----E---EFRFEEIVHTFRPVKNVVDKQVTYSYVVEEPN--------G 320 (451)
T ss_pred ccchhh--hhCHHHHHHHHHHHHHH-HHHH-----H---HHhHHHHHhhcccccccccCceEEEEEEeCCC--------C
Confidence 478897 99999999998875431 1111 1 1122333333321 1111 12234555443 4
Q ss_pred cEEEEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCcc------H---HHHHHHHHHHHHHHcCCcEEEEEEEcCC
Q 024161 157 KLVGVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQK------I---ATALMKACEVLAVLWGFEYLVLRAYEDD 227 (271)
Q Consensus 157 ~iVG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkG------i---Gs~Ll~~~~~~a~~~g~~~i~l~v~~~N 227 (271)
+|-++..............-...-.-.|+.-.+.+..+.--. + -..|+..++-.|+..|++....-+..+|
T Consensus 321 kItdFfsFyslp~t~i~n~kykdiq~gYLYYya~d~~~kd~~~~a~~a~~~r~~e~v~Da~ilak~~~~DVFNalt~~dN 400 (451)
T COG5092 321 KITDFFSFYSLPFTTIENKKYKDIQGGYLYYYAGDDQFKDFDPKATKALKTRVAEMVGDAMILAKVEGCDVFNALTMMDN 400 (451)
T ss_pred ccccceEEEeccceeecCccccccceeEEEEEccCccccccChHHHHHHHHHHHHHHHHHHHHHHHcCCchhhhhhhccc
Confidence 787777665322111111111111233454445444332211 0 1233444455566778887777766676
Q ss_pred HHHHHHHHhCCCEEeeccCCcc
Q 024161 228 YGARRLYSNAGYRVVSSDLPWF 249 (271)
Q Consensus 228 ~~A~~~Y~k~GF~~~~~~~~~~ 249 (271)
. -|..+++|-.-.-.-.|+
T Consensus 401 ~---lFL~dLkFg~GdGflnyY 419 (451)
T COG5092 401 S---LFLADLKFGCGDGFLNYY 419 (451)
T ss_pred h---hHHHhcCccCCCceeEEE
Confidence 5 588899998755544443
No 135
>cd07235 MRD Mitomycin C resistance protein (MRD). Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.
Probab=56.15 E-value=25 Score=25.72 Aligned_cols=27 Identities=7% Similarity=0.107 Sum_probs=19.4
Q ss_pred EEEEEEEcCCHHHHHHHHhCCCEEeecc
Q 024161 218 YLVLRAYEDDYGARRLYSNAGYRVVSSD 245 (271)
Q Consensus 218 ~i~l~v~~~N~~A~~~Y~k~GF~~~~~~ 245 (271)
.+.+.|..- .+|++||+++||+.....
T Consensus 3 ~i~l~V~D~-~~a~~FY~~LGf~~~~~~ 29 (122)
T cd07235 3 AVGIVVADM-AKSLDFYRRLGFDFPEEA 29 (122)
T ss_pred eEEEEeccH-HHHHHHHHHhCceecCCc
Confidence 355666444 569999999999976543
No 136
>PF12261 T_hemolysin: Thermostable hemolysin; InterPro: IPR022050 This family of proteins is found in bacteria. Proteins in this family are typically between 200 and 228 amino acids in length. T_hemolysin is a pore-forming toxin of bacteria, able to lyse erythrocytes from a number of mammalian species.
Probab=51.81 E-value=1.3e+02 Score=24.57 Aligned_cols=80 Identities=21% Similarity=0.277 Sum_probs=56.3
Q ss_pred CcEEEEEEEEeecCCc----------cccc-------ccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcE
Q 024161 156 RKLVGVVDVTVLRDDP----------VLQH-------LRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEY 218 (271)
Q Consensus 156 ~~iVG~~~l~~~~~~~----------~~~~-------~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~ 218 (271)
|++++.+.+....+.+ .... .........|.+++.. +.|.++.|+..+.......|++.
T Consensus 44 g~l~aa~G~r~A~~~~LFlEqYLd~piE~~l~~~~g~~v~R~~IvEvGnLAs~----~~g~~~~l~~~l~~~L~~~g~~w 119 (179)
T PF12261_consen 44 GELVAAAGLRFASQEPLFLEQYLDQPIEQLLSRRFGRPVSRSQIVEVGNLASF----SPGAARLLFAALAQLLAQQGFEW 119 (179)
T ss_pred CCEEEEEeecccCCCCcchhhhcCCcHHHHHHhhcCCCcchhheeEeechhhc----CcccHHHHHHHHHHHHHHCCCCE
Confidence 4888888887654321 0000 0112334556566544 58999999999999999999998
Q ss_pred EEEEEEcCCHHHHHHHHhCCCEEe
Q 024161 219 LVLRAYEDDYGARRLYSNAGYRVV 242 (271)
Q Consensus 219 i~l~v~~~N~~A~~~Y~k~GF~~~ 242 (271)
+..+ .+..-++++.|+|....
T Consensus 120 ~vfT---aT~~lr~~~~rlgl~~~ 140 (179)
T PF12261_consen 120 VVFT---ATRQLRNLFRRLGLPPT 140 (179)
T ss_pred EEEe---CCHHHHHHHHHcCCCce
Confidence 8777 45569999999999874
No 137
>PF02474 NodA: Nodulation protein A (NodA); InterPro: IPR003484 Rhizobial nodulation (Nod) factors are signalling molecules secreted by root-nodulating rhizobia in response to flavanoids excreted by the host plant. They induce various symbiotic responses on the roots of the leguminous host plant at low concentrations, and are required for successful infection. Rhizobial Nod factors are lipo-chitooligosaccharides carrying various substituents which are important determinants of host specificity []. NodA is an N-acyl transferase which specifies the transfer of an acyl chain to the oligosaccharide backbone of Nod factor. Allelic variation of the nodA gene can contribute to the determination of host range [].; GO: 0016746 transferase activity, transferring acyl groups
Probab=51.58 E-value=28 Score=28.32 Aligned_cols=52 Identities=8% Similarity=-0.017 Sum_probs=40.7
Q ss_pred EEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcEEEEEEEcCCHHHHHHHHhCC
Q 024161 183 LYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEYLVLRAYEDDYGARRLYSNAG 238 (271)
Q Consensus 183 ~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y~k~G 238 (271)
+.+.-.+|.|+..|.||+..| ..+.-...+.|..-...+|-.. -++.++|++
T Consensus 86 aElGLygVRpDLEGlGi~hs~-r~m~PvLq~LgVPF~FGtVR~a---l~~Hv~R~~ 137 (196)
T PF02474_consen 86 AELGLYGVRPDLEGLGISHSM-RVMYPVLQELGVPFGFGTVRHA---LRNHVERLC 137 (196)
T ss_pred EEEEEEEeeccccccccchhh-hhhhhHHHhcCCCeecccchHH---HHHHHHHHh
Confidence 457788899999999999976 5777777888998887777543 666777665
No 138
>PF07395 Mig-14: Mig-14; InterPro: IPR009977 This family contains a number of bacterial mig-14 proteins (approximately 270 residues long). In Salmonella, mig-14 contributes to resistance to antimicrobial peptides, although the mechanism is not fully understood [].
Probab=49.39 E-value=1e+02 Score=26.90 Aligned_cols=112 Identities=17% Similarity=0.008 Sum_probs=66.7
Q ss_pred CCCeEEEEccCCcccHHHHHHHHHHhccCCccccchhhHHhhHHHHHHHHHHHHhcCCCCcceEEEEeeCCCCCCCCCCC
Q 024161 77 EYGWKVRKLVRVGEEMREVAFIQAEAFHNPVALFNDVFFEFFKAEVLSGLLYKLRNSPPDRYACLVAEHSNPNDNIEPQR 156 (271)
Q Consensus 77 ~~~~~IR~at~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Va~~~~~~~~~~~~~ 156 (271)
..|=.|+++. .=.-++|++++.+-|...++.... ..-...++.+.|.+.+. --|..-++
T Consensus 124 ~~GG~v~~v~--~~S~~Ela~iY~~Lf~~Rwg~~~~--~~~~l~e~f~~Lr~~~f--------G~vL~l~~--------- 182 (264)
T PF07395_consen 124 EAGGSVRPVS--EFSPEELADIYIDLFQKRWGFRCY--GKEHLAEFFSELRHMIF--------GSVLFLNG--------- 182 (264)
T ss_pred HcCCEEEEHH--HCCHHHHHHHHHHHHHHHhCCCCC--cHHHHHHHHHHhHHhhe--------eeEEEECC---------
Confidence 4455788887 666777888888777654332110 00112223333333332 22333344
Q ss_pred cEEEEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHH----HHHHHHHHHcCCc
Q 024161 157 KLVGVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALM----KACEVLAVLWGFE 217 (271)
Q Consensus 157 ~iVG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll----~~~~~~a~~~g~~ 217 (271)
++|++-.+....++.+. ++-....++||+++.--.|+-|+ +.+-+.|++.|.+
T Consensus 183 ~P~Aiqlv~k~es~~wv--------~~D~iNgG~Dp~~~~~SpGSiL~w~Ni~~A~~~~~~~~k~ 239 (264)
T PF07395_consen 183 QPCAIQLVYKVESPKWV--------YFDYINGGYDPECRDFSPGSILMWLNIQDAWEYCRAQGKP 239 (264)
T ss_pred cceEEEEEEEecCCCeE--------EEecccCccCcccccCCCccEEEEeeHHHHHHHHHHhCCc
Confidence 79999888765544333 12234677899999999999885 6677777777754
No 139
>COG5653 Protein involved in cellulose biosynthesis (CelD) [Cell envelope biogenesis, outer membrane]
Probab=48.52 E-value=2.3e+02 Score=26.35 Aligned_cols=58 Identities=16% Similarity=0.012 Sum_probs=48.9
Q ss_pred cEEEEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcEEEEEEEcC
Q 024161 157 KLVGVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEYLVLRAYED 226 (271)
Q Consensus 157 ~iVG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~~ 226 (271)
.+|+....... +++++.+-..++|++-.--=|-.|+-..++++...|+.++-+.|-.+
T Consensus 282 ~lvAV~~~lr~------------~~t~h~~l~a~dpe~~~~SPG~~lf~d~i~~~~~~g~~~~DfgvG~q 339 (406)
T COG5653 282 RLVAVHGLLRQ------------GGTYHAWLGAIDPEFARASPGMLLFLDLIEWACGQGLARFDFGVGDQ 339 (406)
T ss_pred EEEEEEeeecc------------CCEEEEEeeccCHHHhhcCchHHHHHHHHHHHhcCCCeEEeecCCCh
Confidence 78877766632 36777888999999999999999999999999999999998887554
No 140
>cd08356 Glo_EDI_BRP_like_17 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.
Probab=46.69 E-value=24 Score=25.86 Aligned_cols=24 Identities=13% Similarity=0.199 Sum_probs=19.3
Q ss_pred CCHHHHHHHHhCCCEEeeccCCcc
Q 024161 226 DDYGARRLYSNAGYRVVSSDLPWF 249 (271)
Q Consensus 226 ~N~~A~~~Y~k~GF~~~~~~~~~~ 249 (271)
+=.++++||+.+||+.......|.
T Consensus 11 Dl~~s~~FY~~LGf~~~~~~~~~~ 34 (113)
T cd08356 11 DFAESKQFYQALGFELEWENDNLA 34 (113)
T ss_pred cHHHHHHHHHHhCCeeEecCCCEE
Confidence 335799999999999988866554
No 141
>PF00925 GTP_cyclohydro2: GTP cyclohydrolase II; InterPro: IPR000926 GTP cyclohydrolase II catalyses the first committed step in the biosynthesis of riboflavin. The enzyme converts GTP and water to formate, 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)- pyrimidine and pyrophosphate, and requires magnesium as a cofactor. It is sometimes found as a bifunctional enzyme with 3,4-dihydroxy-2-butanone 4-phosphate synthase (DHBP_synthase) IPR000422 from INTERPRO. ; GO: 0003935 GTP cyclohydrolase II activity, 0009231 riboflavin biosynthetic process; PDB: 2BZ0_B 2BZ1_A.
Probab=45.16 E-value=33 Score=27.68 Aligned_cols=47 Identities=15% Similarity=0.194 Sum_probs=29.3
Q ss_pred CCCccCccHHHHHHHHHHHHHHHcCCcEEEEEEEcCCHHHHHHHHhCCCEEeeccC
Q 024161 191 SKRFRRQKIATALMKACEVLAVLWGFEYLVLRAYEDDYGARRLYSNAGYRVVSSDL 246 (271)
Q Consensus 191 ~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y~k~GF~~~~~~~ 246 (271)
.+++|--|+|.++|+.+ |++++.|-+ +|+.-..-.+.+|-++++.+|
T Consensus 122 ~~d~R~ygigaqIL~dL-------GV~~~rLLt--nnp~k~~~L~g~gleV~~~vp 168 (169)
T PF00925_consen 122 PEDLRDYGIGAQILRDL-------GVKKMRLLT--NNPRKYVALEGFGLEVVERVP 168 (169)
T ss_dssp -S----THHHHHHHHHT-------T--SEEEE---S-HHHHHHHHHTT--EEEEE-
T ss_pred ccccccHHHHHHHHHHc-------CCCEEEECC--CChhHHHHHhcCCCEEEEEec
Confidence 57899999999988665 999888775 468888889999999988754
No 142
>cd08350 BLMT_like BLMT, a bleomycin resistance protein encoded on the transposon Tn5, and similar proteins. BLMT is a bleomycin (Bm) resistance protein, encoded by the ble gene on the transposon Tn5. This protein confers a survival advantage to Escherichia coli host cells. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMT has strong binding affinity to Bm and it protects against this lethal compound through drug sequestering. BLMT has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMT is a dimer with two Bm-binding pockets formed at the dimer interface.
Probab=44.75 E-value=33 Score=25.10 Aligned_cols=24 Identities=17% Similarity=0.308 Sum_probs=18.9
Q ss_pred CCHHHHHHHHhCCCEEeeccC-Ccc
Q 024161 226 DDYGARRLYSNAGYRVVSSDL-PWF 249 (271)
Q Consensus 226 ~N~~A~~~Y~k~GF~~~~~~~-~~~ 249 (271)
+=..|++||+++||+.....+ .|.
T Consensus 12 Dl~~s~~FY~~lG~~~~~~~~~~~~ 36 (120)
T cd08350 12 DLDATEAFYARLGFSVGYRQAAGYM 36 (120)
T ss_pred CHHHHHHHHHHcCCEEEecCCCCEE
Confidence 345799999999999987766 454
No 143
>PRK15312 antimicrobial resistance protein Mig-14; Provisional
Probab=42.94 E-value=1.4e+02 Score=26.54 Aligned_cols=115 Identities=14% Similarity=0.072 Sum_probs=63.9
Q ss_pred cCCCeEEEEccCCcccHHHHHHHHHHhccCCccccchhhHHhhHHHHHHHHHHHHhcCCCCcceEEEEeeCCCCCCCCCC
Q 024161 76 SEYGWKVRKLVRVGEEMREVAFIQAEAFHNPVALFNDVFFEFFKAEVLSGLLYKLRNSPPDRYACLVAEHSNPNDNIEPQ 155 (271)
Q Consensus 76 ~~~~~~IR~at~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~Va~~~~~~~~~~~~ 155 (271)
...|=.||.+. .=--+++++++.+.|...++.-... + ..+...++...++. -.+ --|..-++
T Consensus 151 ~~~GG~v~~is--~fS~~Ela~iY~~Lf~~Rwg~~~~~-~---~~~~l~e~f~~Lr~---l~f-G~VLfl~~-------- 212 (298)
T PRK15312 151 LRNGGSVKSVA--DCSSDELTHIFIELFRSRFGNTLSC-Y---PADNLANFFSQLRH---LLF-GHILYIEG-------- 212 (298)
T ss_pred HHcCCEEEEhH--HCCHHHHHHHHHHHHHHHhCCCCCc-c---cHHHHHHHHHHhHH---hhe-eeEEEECC--------
Confidence 44555788886 4455667777777765433311110 0 11122233333332 112 23333444
Q ss_pred CcEEEEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHH----HHHHHHHHHcCCc
Q 024161 156 RKLVGVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALM----KACEVLAVLWGFE 217 (271)
Q Consensus 156 ~~iVG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll----~~~~~~a~~~g~~ 217 (271)
+++++-.+....++.+. ++-.-..++||+++..-+|+-|+ +.+-+.|++.|.+
T Consensus 213 -~PcA~qlv~k~eSp~wi--------~~D~iNgG~Dpe~~~~spGSIL~WlNi~~A~~~~~~~~K~ 269 (298)
T PRK15312 213 -IPCAFDIVLKSESQMNV--------YFDVPNGAVKNECMPLSPGSILMWLNISRARHYCQERQKK 269 (298)
T ss_pred -cceEEEEEEEecCCCcE--------EEecccCccCcccccCCCccEEEEecHHHHHHHHHhcCCc
Confidence 79999888765544332 12234677999999999999874 5666666666643
No 144
>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.
Probab=42.88 E-value=27 Score=26.45 Aligned_cols=28 Identities=7% Similarity=0.100 Sum_probs=20.7
Q ss_pred CcEEEEEEEcCCHHHHHHHHhCCCEEeec
Q 024161 216 FEYLVLRAYEDDYGARRLYSNAGYRVVSS 244 (271)
Q Consensus 216 ~~~i~l~v~~~N~~A~~~Y~k~GF~~~~~ 244 (271)
+..+.+.|..- ..+++||+++||+....
T Consensus 4 i~Hi~i~v~Dl-~~s~~FY~~LG~~~~~~ 31 (142)
T cd08353 4 MDNVGIVVRDL-EAAIAFFLELGLELEGR 31 (142)
T ss_pred eeeEEEEeCCH-HHHHHHHHHcCCEEccc
Confidence 44566666644 56999999999987655
No 145
>COG0807 RibA GTP cyclohydrolase II [Coenzyme metabolism]
Probab=41.38 E-value=43 Score=27.79 Aligned_cols=53 Identities=17% Similarity=0.090 Sum_probs=42.0
Q ss_pred EEEECCCccCccHHHHHHHHHHHHHHHcCCcEEEEEEEcCCHHHHHHHHhCCCEEeeccCCc
Q 024161 187 GLAVSKRFRRQKIATALMKACEVLAVLWGFEYLVLRAYEDDYGARRLYSNAGYRVVSSDLPW 248 (271)
Q Consensus 187 ~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y~k~GF~~~~~~~~~ 248 (271)
.++--+++|.-|+|.++|+.+ |++++.|-+. |+.-+.-.+..|.+++.+++-.
T Consensus 119 ~lg~~~D~R~ygigAqIL~dL-------GI~~irLLtn--np~K~~~l~~~Gi~vverv~~~ 171 (193)
T COG0807 119 ALGFPADERDYGIGAQILKDL-------GIKKIRLLTN--NPRKIYGLEGFGINVVERVPLI 171 (193)
T ss_pred hhcCCchHHHHHHHHHHHHHc-------CCcEEEEecC--ChHHHHHHHhCCceEEEEeecC
Confidence 455678999999999998766 9999999864 7767777788888888876543
No 146
>cd09012 Glo_EDI_BRP_like_24 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.
Probab=37.02 E-value=32 Score=25.35 Aligned_cols=25 Identities=16% Similarity=0.259 Sum_probs=17.7
Q ss_pred EEEEEEcCCHHHHHHHHhCCCEEeec
Q 024161 219 LVLRAYEDDYGARRLYSNAGYRVVSS 244 (271)
Q Consensus 219 i~l~v~~~N~~A~~~Y~k~GF~~~~~ 244 (271)
+.|.|. +=.+|++||+.+||+....
T Consensus 4 v~l~V~-Dl~~s~~FY~~lGf~~~~~ 28 (124)
T cd09012 4 INLPVK-DLEKSTAFYTALGFEFNPQ 28 (124)
T ss_pred EEeecC-CHHHHHHHHHHCCCEEccc
Confidence 334443 3367999999999997653
No 147
>COG2266 GTP:adenosylcobinamide-phosphate guanylyltransferase [Coenzyme metabolism]
Probab=35.10 E-value=83 Score=25.68 Aligned_cols=45 Identities=7% Similarity=0.094 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHHHcCCcEEEEEEEcCCHHHHHHHHhCCCEEeecc
Q 024161 200 ATALMKACEVLAVLWGFEYLVLRAYEDDYGARRLYSNAGYRVVSSD 245 (271)
Q Consensus 200 Gs~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y~k~GF~~~~~~ 245 (271)
|+.|+.+.++.+++ .++.+++.++++-+.-..+.++.|++...+-
T Consensus 26 GkpLI~~v~~al~~-~~d~i~v~isp~tp~t~~~~~~~gv~vi~tp 70 (177)
T COG2266 26 GKPLIDRVLEALRK-IVDEIIVAISPHTPKTKEYLESVGVKVIETP 70 (177)
T ss_pred CccHHHHHHHHHHh-hcCcEEEEeCCCCHhHHHHHHhcCceEEEcC
Confidence 57899999998887 8899999999999988899999999887773
No 148
>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.
Probab=33.99 E-value=71 Score=22.96 Aligned_cols=29 Identities=24% Similarity=0.290 Sum_probs=21.0
Q ss_pred CcEEEEEEEcCCHHHHHHHHhCCCEEeecc
Q 024161 216 FEYLVLRAYEDDYGARRLYSNAGYRVVSSD 245 (271)
Q Consensus 216 ~~~i~l~v~~~N~~A~~~Y~k~GF~~~~~~ 245 (271)
+..+.+.|.. =.++++||+.+||+.....
T Consensus 3 i~hv~l~v~d-~~~s~~FY~~lG~~~~~~~ 31 (112)
T cd08344 3 IDHFALEVPD-LEVARRFYEAFGLDVREEG 31 (112)
T ss_pred eeEEEEecCC-HHHHHHHHHHhCCcEEeec
Confidence 4456666553 3579999999999987654
No 149
>PF02100 ODC_AZ: Ornithine decarboxylase antizyme; InterPro: IPR002993 Ornithine decarboxylase antizyme (ODC-AZ) [] binds to, and destabilises, ornithine decarboxylase (ODC), a key enzyme in polyamine synthesis. ODC is then rapidly degraded. The expression of ODC-AZ requires programmed, ribosomal frameshifting which is modulated according to the cellular concentration of polyamines. High levels of polyamines induce a +1 ribosomal frameshift in the translation of mRNA for the antizyme leading to the expression of a full-length protein. At least two forms of ODC-AZ exist in mammals [] and the protein has been found in Drosophila (protein Gutfeeling).; GO: 0004857 enzyme inhibitor activity, 0008073 ornithine decarboxylase inhibitor activity; PDB: 1ZO0_A.
Probab=33.33 E-value=2e+02 Score=21.32 Aligned_cols=55 Identities=16% Similarity=0.157 Sum_probs=24.1
Q ss_pred ECCCccCccHHHHHHHHHHHHHH-HcCCcEEEEEEEcCCHHHHHHHHh---CCCEEeecc
Q 024161 190 VSKRFRRQKIATALMKACEVLAV-LWGFEYLVLRAYEDDYGARRLYSN---AGYRVVSSD 245 (271)
Q Consensus 190 V~p~~RGkGiGs~Ll~~~~~~a~-~~g~~~i~l~v~~~N~~A~~~Y~k---~GF~~~~~~ 245 (271)
+.+..-++| -+.-+-++++.|. +.+|..+.+.+..+...-..+-+. .||+.+.-.
T Consensus 30 ip~~~~~~~-~K~~lvaLLElAee~L~c~~vvic~~k~~~d~~~Llr~l~~vGF~lv~~~ 88 (108)
T PF02100_consen 30 IPSSALGQG-SKESLVALLELAEEKLGCSHVVICLDKNRPDRASLLRTLMWVGFELVTPG 88 (108)
T ss_dssp -SS---SS---SHHHHHHHHHHHHHH----EEEEE---SS-HHHHHHHHTTT--EEE---
T ss_pred ECCcccccc-cHHHHHHHHHHhcCcCCCCEEEEEEECCchhHHHhhhhcEeeccEecCCC
Confidence 344455555 4566667788886 579999999998876654444444 588877664
No 150
>PTZ00129 40S ribosomal protein S14; Provisional
Probab=33.22 E-value=1.8e+02 Score=23.03 Aligned_cols=45 Identities=16% Similarity=0.113 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHHcCCcEEEEEE-----------EcCCHHHHHHHHhCCCEEeec
Q 024161 200 ATALMKACEVLAVLWGFEYLVLRA-----------YEDDYGARRLYSNAGYRVVSS 244 (271)
Q Consensus 200 Gs~Ll~~~~~~a~~~g~~~i~l~v-----------~~~N~~A~~~Y~k~GF~~~~~ 244 (271)
+....+.+.+.+.+.|++.+.+.+ -+.-+.|++-+.+.|+++...
T Consensus 74 Aq~aa~~~a~k~~~~Gi~~v~V~vr~~gg~~~kg~GpGr~~airaL~~~glkI~~I 129 (149)
T PTZ00129 74 AMMAAQDVAARCKELGINALHIKLRATGGVRTKTPGPGAQAALRALARAGLKIGRI 129 (149)
T ss_pred HHHHHHHHHHHHHHcCCeEEEEEEEecCCCCCCCCCCCHHHHHHHHHHCCCEEEEE
Confidence 334555677778899999999999 467789999999999998655
No 151
>cd07267 THT_Oxygenase_N N-terminal domain of 2,4,5-trihydroxytoluene (THT) oxygenase. This subfamily contains the N-terminal, non-catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.
Probab=32.07 E-value=44 Score=24.19 Aligned_cols=29 Identities=14% Similarity=0.108 Sum_probs=20.8
Q ss_pred cEEEEEEEcCCHHHHHHHHhCCCEEeeccC
Q 024161 217 EYLVLRAYEDDYGARRLYSNAGYRVVSSDL 246 (271)
Q Consensus 217 ~~i~l~v~~~N~~A~~~Y~k~GF~~~~~~~ 246 (271)
..+.+.|.. =.+|.+||+.+||+......
T Consensus 5 ~hv~l~v~D-l~~s~~FY~~lGl~~~~~~~ 33 (113)
T cd07267 5 AHVRFEHPD-LDKAERFLTDFGLEVAARTD 33 (113)
T ss_pred EEEEEccCC-HHHHHHHHHHcCCEEEEecC
Confidence 445566554 35799999999999876643
No 152
>KOG3014 consensus Protein involved in establishing cohesion between sister chromatids during DNA replication [Replication, recombination and repair]
Probab=31.31 E-value=50 Score=28.47 Aligned_cols=32 Identities=31% Similarity=0.225 Sum_probs=27.1
Q ss_pred CeEEEEEEEECCCccCccHHHHHHHHHHHHHH
Q 024161 181 EYLYISGLAVSKRFRRQKIATALMKACEVLAV 212 (271)
Q Consensus 181 ~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~ 212 (271)
-...|..+.|.+..|++||++.|+..+...-.
T Consensus 182 ~~~GIsRIWV~s~~Rr~gIAs~lldva~~~~~ 213 (257)
T KOG3014|consen 182 AICGISRIWVSSLRRRKGIASLLLDVARCNFV 213 (257)
T ss_pred cEeeeEEEEeehhhhhhhhHHHHHHHHHHhhh
Confidence 35669999999999999999999998765543
No 153
>PRK10150 beta-D-glucuronidase; Provisional
Probab=31.22 E-value=1.9e+02 Score=28.36 Aligned_cols=69 Identities=13% Similarity=0.082 Sum_probs=53.2
Q ss_pred CCeEEEEEEEECCCcc--CccHHHHHHHHHHHHHHHcCCcEEEEEEEcCCHHHHHHHHhCCCEEeeccCCc
Q 024161 180 EEYLYISGLAVSKRFR--RQKIATALMKACEVLAVLWGFEYLVLRAYEDDYGARRLYSNAGYRVVSSDLPW 248 (271)
Q Consensus 180 ~~~~yi~~l~V~p~~R--GkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y~k~GF~~~~~~~~~ 248 (271)
++-.++.++..++++- |.++-.+.+..-++.+++.|+..|.+.-.+..+.-..+.-++|+-+..+.+.|
T Consensus 289 G~pv~lrG~~~h~~~~~~G~a~~~~~~~~d~~l~K~~G~N~vR~sh~p~~~~~~~~cD~~GllV~~E~p~~ 359 (604)
T PRK10150 289 GKPFYFKGFGKHEDADIRGKGLDEVLNVHDHNLMKWIGANSFRTSHYPYSEEMLDLADRHGIVVIDETPAV 359 (604)
T ss_pred CEEEEEEeeeccCCCCccCCcCCHHHHHHHHHHHHHCCCCEEEeccCCCCHHHHHHHHhcCcEEEEecccc
Confidence 3556677887877654 55566777777788999999999999766666667777789999999887754
No 154
>COG3473 Maleate cis-trans isomerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=31.13 E-value=1e+02 Score=26.04 Aligned_cols=38 Identities=11% Similarity=0.083 Sum_probs=29.7
Q ss_pred HHHHHHHcCCcEEEEEE---EcCCHHHHHHHHhCCCEEeec
Q 024161 207 CEVLAVLWGFEYLVLRA---YEDDYGARRLYSNAGYRVVSS 244 (271)
Q Consensus 207 ~~~~a~~~g~~~i~l~v---~~~N~~A~~~Y~k~GF~~~~~ 244 (271)
.++-.+..|.+++.+-+ .+-|..-+.|+++.||+++..
T Consensus 109 vv~aL~al~a~ri~vlTPY~~evn~~e~ef~~~~Gfeiv~~ 149 (238)
T COG3473 109 VVEALNALGAQRISVLTPYIDEVNQREIEFLEANGFEIVDF 149 (238)
T ss_pred HHHHHHhhCcceEEEeccchhhhhhHHHHHHHhCCeEEEEe
Confidence 34455677888888765 357889999999999999765
No 155
>PRK02983 lysS lysyl-tRNA synthetase; Provisional
Probab=31.03 E-value=3.2e+02 Score=29.13 Aligned_cols=58 Identities=10% Similarity=0.049 Sum_probs=45.1
Q ss_pred CcEEEEEEEEeecCCcccccccCCCCeEEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcEEEEEEEc
Q 024161 156 RKLVGVVDVTVLRDDPVLQHLRGAEEYLYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEYLVLRAYE 225 (271)
Q Consensus 156 ~~iVG~~~l~~~~~~~~~~~~~~~~~~~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~ 225 (271)
|+|+|++.+.+.. .+-+.+.-+--+|+. =.|+-..|+..+++++++.|++++.|...+
T Consensus 430 G~i~af~s~~p~~-----------~~g~slDLMRr~pda-pnGvmE~L~~~l~~~~k~~G~~~~sLg~AP 487 (1094)
T PRK02983 430 GQVVALLSFVPWG-----------RRGLSLDLMRRSPDA-PNGVIELMVAELALEAESLGITRISLNFAV 487 (1094)
T ss_pred CeEEEEEEEeeeC-----------CCCEEEEecccCCCC-CCCHHHHHHHHHHHHHHHcCCCEEEechhh
Confidence 5999999998532 111445555555664 789999999999999999999999998766
No 156
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=30.98 E-value=1.1e+02 Score=22.84 Aligned_cols=43 Identities=16% Similarity=0.090 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHcCCcEEEEEEEcCCHHHHHHHHhCCCEEeec
Q 024161 202 ALMKACEVLAVLWGFEYLVLRAYEDDYGARRLYSNAGYRVVSS 244 (271)
Q Consensus 202 ~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y~k~GF~~~~~ 244 (271)
.-+...++.+.+.|++.+++.....++.++++-++.|.+.++.
T Consensus 66 ~~~~~~v~~~~~~g~~~v~~~~g~~~~~~~~~a~~~gi~vigp 108 (116)
T PF13380_consen 66 DKVPEIVDEAAALGVKAVWLQPGAESEELIEAAREAGIRVIGP 108 (116)
T ss_dssp HHHHHHHHHHHHHT-SEEEE-TTS--HHHHHHHHHTT-EEEES
T ss_pred HHHHHHHHHHHHcCCCEEEEEcchHHHHHHHHHHHcCCEEEeC
Confidence 4556667777788999999999999999999999999998865
No 157
>TIGR02990 ectoine_eutA ectoine utilization protein EutA. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti and Silicibacter pomeroyi. It is missing from two other species with the other ectoine transport and utilization genes: Pseudomonas putida and Agrobacterium tumefaciens.
Probab=30.70 E-value=81 Score=27.04 Aligned_cols=43 Identities=14% Similarity=0.119 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHcCCcEEEEEEE---cCCHHHHHHHHhCCCEEeec
Q 024161 202 ALMKACEVLAVLWGFEYLVLRAY---EDDYGARRLYSNAGYRVVSS 244 (271)
Q Consensus 202 ~Ll~~~~~~a~~~g~~~i~l~v~---~~N~~A~~~Y~k~GF~~~~~ 244 (271)
.-..++.+.+++.|.++|.+-+. .-|..-++||+..||+++..
T Consensus 106 t~~~A~~~AL~alg~~RIalvTPY~~~v~~~~~~~l~~~G~eV~~~ 151 (239)
T TIGR02990 106 TPSSAAVDGLAALGVRRISLLTPYTPETSRPMAQYFAVRGFEIVNF 151 (239)
T ss_pred CHHHHHHHHHHHcCCCEEEEECCCcHHHHHHHHHHHHhCCcEEeee
Confidence 34456667778889999998764 35677899999999999876
No 158
>PF04816 DUF633: Family of unknown function (DUF633) ; InterPro: IPR006901 This is a family of uncharacterised bacterial proteins.; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity; PDB: 3LEC_A 3KU1_G 3KR9_A 3GNL_B.
Probab=30.59 E-value=98 Score=25.84 Aligned_cols=47 Identities=15% Similarity=0.227 Sum_probs=34.3
Q ss_pred cHHHHHHHHHHHHHHHc--CCcEEEEEEEcCCHHHHHHHHhCCCEEeec
Q 024161 198 KIATALMKACEVLAVLW--GFEYLVLRAYEDDYGARRLYSNAGYRVVSS 244 (271)
Q Consensus 198 GiGs~Ll~~~~~~a~~~--g~~~i~l~v~~~N~~A~~~Y~k~GF~~~~~ 244 (271)
|+|-.|+..+++..... ...++.|.-..+...-+++...+||....+
T Consensus 74 GMGG~lI~~ILe~~~~~~~~~~~lILqP~~~~~~LR~~L~~~gf~I~~E 122 (205)
T PF04816_consen 74 GMGGELIIEILEAGPEKLSSAKRLILQPNTHAYELRRWLYENGFEIIDE 122 (205)
T ss_dssp EE-HHHHHHHHHHTGGGGTT--EEEEEESS-HHHHHHHHHHTTEEEEEE
T ss_pred cCCHHHHHHHHHhhHHHhccCCeEEEeCCCChHHHHHHHHHCCCEEEEe
Confidence 66788888888887642 456777776666667788899999999998
No 159
>KOG4387 consensus Ornithine decarboxylase antizyme [Amino acid transport and metabolism]
Probab=29.87 E-value=3.1e+02 Score=22.46 Aligned_cols=76 Identities=13% Similarity=0.048 Sum_probs=50.2
Q ss_pred ECCCccCccHHHHHHHHHHHHHH-HcCCcEEEEEEEcCCHHHHHH---HHhCCCEEeeccCCccccccCccceEEEEEec
Q 024161 190 VSKRFRRQKIATALMKACEVLAV-LWGFEYLVLRAYEDDYGARRL---YSNAGYRVVSSDLPWFSTWIGRKRRVLMIKRS 265 (271)
Q Consensus 190 V~p~~RGkGiGs~Ll~~~~~~a~-~~g~~~i~l~v~~~N~~A~~~---Y~k~GF~~~~~~~~~~~~~~~~~~~~~m~K~l 265 (271)
..|+-.=-+.-++=+-++++.|. +..++++.+....+|..--.| +.=.||+.+.-.-+. ....+...+|...+
T Consensus 107 ~IPdq~l~~gsKe~lvalLEfAEekl~~d~Vfi~F~K~R~dr~~LlrtfsyvGFEpvrp~HP~---~pp~~~~ffM~Y~~ 183 (191)
T KOG4387|consen 107 EIPDQALDVGSKEGLVALLEFAEEKLHVDKVFICFDKNREDRAALLRTFSYVGFEPVRPDHPV---VPPRPDVFFMVYPL 183 (191)
T ss_pred ecCcchhcccchHhHHHHHHHHHHhhccceEEEEEecCccChHhhhhhehcceeeecCCCCCC---CCCccceEEEEEee
Confidence 44444444555666777888886 468999999988876633334 444689988875332 35666778888877
Q ss_pred CCC
Q 024161 266 DHN 268 (271)
Q Consensus 266 ~~~ 268 (271)
..+
T Consensus 184 er~ 186 (191)
T KOG4387|consen 184 ERD 186 (191)
T ss_pred ccc
Confidence 544
No 160
>cd07253 Glo_EDI_BRP_like_2 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.
Probab=29.21 E-value=1.1e+02 Score=21.91 Aligned_cols=31 Identities=23% Similarity=0.244 Sum_probs=22.9
Q ss_pred CCcEEEEEEEcCCHHHHHHHHh-CCCEEeeccC
Q 024161 215 GFEYLVLRAYEDDYGARRLYSN-AGYRVVSSDL 246 (271)
Q Consensus 215 g~~~i~l~v~~~N~~A~~~Y~k-~GF~~~~~~~ 246 (271)
++..+.+.|. +=.++++||++ +||+......
T Consensus 3 ~l~hi~l~v~-d~~~s~~Fy~~~lG~~~~~~~~ 34 (125)
T cd07253 3 RIDHVVLTVA-DIEATLDFYTRVLGMEVVRFGE 34 (125)
T ss_pred ccceEEEEec-CHHHHHHHHHHHhCceeecccc
Confidence 4556777775 33579999998 8999987654
No 161
>PF12681 Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B 1JIF_B 1JIE_B 1QTO_A 3OXH_A 2PJS_A 2RBB_A 3SK1_B 3SK2_B 3RRI_A ....
Probab=29.06 E-value=53 Score=23.12 Aligned_cols=24 Identities=25% Similarity=0.429 Sum_probs=19.4
Q ss_pred HHHHHHHHh-CCCEEeeccCCcccc
Q 024161 228 YGARRLYSN-AGYRVVSSDLPWFST 251 (271)
Q Consensus 228 ~~A~~~Y~k-~GF~~~~~~~~~~~~ 251 (271)
..|++||++ +||+.....+.+...
T Consensus 7 ~~a~~FY~~~lg~~~~~~~~~~~~~ 31 (108)
T PF12681_consen 7 EAAAAFYEDVLGFEVVFDDPDYVDF 31 (108)
T ss_dssp HHHHHHHHHTTTSEEEEEETSEEEE
T ss_pred HHHHHHHHHhcCCEEEEeCCCeEEE
Confidence 579999998 999999976666533
No 162
>TIGR00505 ribA GTP cyclohydrolase II. Several members of the family are bifunctional, involving both ribA and ribB function. In these cases, ribA tends to be on the C-terminal end of the protein and ribB tends to be on the N-terminal. The function of archaeal members of the family has not been demonstrated and is assigned tentatively.
Probab=28.28 E-value=1.1e+02 Score=25.24 Aligned_cols=46 Identities=13% Similarity=0.179 Sum_probs=35.9
Q ss_pred CCCccCccHHHHHHHHHHHHHHHcCCcEEEEEEEcCCHHHHHHHHhCCCEEeecc
Q 024161 191 SKRFRRQKIATALMKACEVLAVLWGFEYLVLRAYEDDYGARRLYSNAGYRVVSSD 245 (271)
Q Consensus 191 ~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y~k~GF~~~~~~ 245 (271)
.+++|--|+|.++|+.+ |++++.|-+. |+.-..-.+.+|.++++..
T Consensus 121 ~~d~R~yGiGAQIL~dL-------GV~~~rLLtn--~~~k~~~L~g~gleVv~~~ 166 (191)
T TIGR00505 121 PADERDFSLCADILEDL-------GVKKVRLLTN--NPKKIEILKKAGINIVERV 166 (191)
T ss_pred cccceehhHHHHHHHHc-------CCCEEEECCC--CHHHHHHHHhCCCEEEEEe
Confidence 45699999999998765 9999988754 4545666778899988775
No 163
>PRK09318 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein; Provisional
Probab=28.04 E-value=87 Score=29.00 Aligned_cols=34 Identities=18% Similarity=0.160 Sum_probs=25.7
Q ss_pred HHHcCCcEEEEEEEcCCHHHHHHHHhCCCEEeeccC
Q 024161 211 AVLWGFEYLVLRAYEDDYGARRLYSNAGYRVVSSDL 246 (271)
Q Consensus 211 a~~~g~~~i~l~v~~~N~~A~~~Y~k~GF~~~~~~~ 246 (271)
.+..|++++.|-+ +|+.-+.-.+.+|.++++..+
T Consensus 323 L~dLGV~~irLLT--Nnp~K~~~L~~~GieV~~~vp 356 (387)
T PRK09318 323 LKALGIEKVRLLT--NNPRKTKALEKYGIEVVETVP 356 (387)
T ss_pred HHHcCCCEEEECC--CCHHHHHHHHhCCCEEEEEec
Confidence 3456888887775 477677778899999998764
No 164
>PRK00393 ribA GTP cyclohydrolase II; Reviewed
Probab=27.89 E-value=97 Score=25.66 Aligned_cols=47 Identities=19% Similarity=0.219 Sum_probs=36.2
Q ss_pred ECCCccCccHHHHHHHHHHHHHHHcCCcEEEEEEEcCCHHHHHHHHhCCCEEeecc
Q 024161 190 VSKRFRRQKIATALMKACEVLAVLWGFEYLVLRAYEDDYGARRLYSNAGYRVVSSD 245 (271)
Q Consensus 190 V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y~k~GF~~~~~~ 245 (271)
..+++|--|+|.++|+.+ |++++.|-+. |+.-..-...+|.++++..
T Consensus 123 ~~~d~R~yGiGAQIL~dL-------GV~~mrLLtn--~~~k~~~L~g~GleV~~~~ 169 (197)
T PRK00393 123 FAADERDYTLAADMLKAL-------GVKKVRLLTN--NPKKVEALTEAGINIVERV 169 (197)
T ss_pred CCccceehhHHHHHHHHc-------CCCEEEECCC--CHHHHHHHHhCCCEEEEEe
Confidence 356799999999988755 9999987754 4545566679999998765
No 165
>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS). HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su
Probab=27.35 E-value=93 Score=23.43 Aligned_cols=28 Identities=11% Similarity=0.069 Sum_probs=20.7
Q ss_pred EEEEEEEcCCHHHHHHHHh-CCCEEeeccC
Q 024161 218 YLVLRAYEDDYGARRLYSN-AGYRVVSSDL 246 (271)
Q Consensus 218 ~i~l~v~~~N~~A~~~Y~k-~GF~~~~~~~ 246 (271)
.+.+.|. +=.++++||++ +||+......
T Consensus 3 Hi~i~V~-D~e~s~~FY~~vLGf~~~~~~~ 31 (136)
T cd08342 3 HVEFYVG-NAKQLASWFSTKLGFEPVAYHG 31 (136)
T ss_pred EEEEEeC-CHHHHHHHHHHhcCCeEEEecC
Confidence 4556664 44679999999 9999877643
No 166
>TIGR03645 glyox_marine lactoylglutathione lyase family protein. Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.
Probab=26.42 E-value=68 Score=25.28 Aligned_cols=28 Identities=14% Similarity=0.310 Sum_probs=20.7
Q ss_pred CCcEEEEEEEcCCHHHHHHHHh-CCCEEee
Q 024161 215 GFEYLVLRAYEDDYGARRLYSN-AGYRVVS 243 (271)
Q Consensus 215 g~~~i~l~v~~~N~~A~~~Y~k-~GF~~~~ 243 (271)
++..+.+.|..- .+|+.||++ +||+.+.
T Consensus 4 ~i~Hv~i~V~Dl-e~s~~FY~~~LG~~~~~ 32 (162)
T TIGR03645 4 TFSHIGISVPDL-DAAVKFYTEVLGWYLIM 32 (162)
T ss_pred eEEEEEEEeCCH-HHHHHHHHHhcCCEEEe
Confidence 455677777654 679999977 8998753
No 167
>cd08362 BphC5-RrK37_N_like N-terminal, non-catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Rhodococcus rhodochrous K37, and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the N-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dioxyge
Probab=26.32 E-value=74 Score=22.93 Aligned_cols=34 Identities=21% Similarity=0.143 Sum_probs=23.7
Q ss_pred CCcEEEEEEEcCCHHHHHHHHh-CCCEEeeccCCcc
Q 024161 215 GFEYLVLRAYEDDYGARRLYSN-AGYRVVSSDLPWF 249 (271)
Q Consensus 215 g~~~i~l~v~~~N~~A~~~Y~k-~GF~~~~~~~~~~ 249 (271)
++..+.+.|.. =..+++||++ +||+.......+.
T Consensus 3 ~i~hv~l~v~d-~~~s~~FY~~~lG~~~~~~~~~~~ 37 (120)
T cd08362 3 ALRGVGLGVPD-LAAAAAFYREVWGLSVVAEDDGIV 37 (120)
T ss_pred eeeEEEEecCC-HHHHHHHHHhCcCcEEEEecCCEE
Confidence 44556666653 3679999997 8999876655443
No 168
>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.
Probab=25.87 E-value=85 Score=22.57 Aligned_cols=29 Identities=17% Similarity=0.342 Sum_probs=20.2
Q ss_pred CcEEEEEEEcCCHHHHHHHHh-CCCEEeecc
Q 024161 216 FEYLVLRAYEDDYGARRLYSN-AGYRVVSSD 245 (271)
Q Consensus 216 ~~~i~l~v~~~N~~A~~~Y~k-~GF~~~~~~ 245 (271)
+..+.+.|..- ..+++||++ +||+.....
T Consensus 2 i~hv~l~v~d~-~~a~~FY~~~lG~~~~~~~ 31 (126)
T cd08346 2 LHHVTLITRDA-QETVDFYTDVLGLRLVKKT 31 (126)
T ss_pred cccEEEEcCCh-hHhHHHHHHccCCEEeeeE
Confidence 44566665433 579999976 799987664
No 169
>PF02836 Glyco_hydro_2_C: Glycosyl hydrolases family 2, TIM barrel domain; InterPro: IPR006103 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 2 GH2 from CAZY comprises enzymes with several known activities; beta-galactosidase (3.2.1.23 from EC); beta-mannosidase (3.2.1.25 from EC); beta-glucuronidase (3.2.1.31 from EC). These enzymes contain a conserved glutamic acid residue which has been shown [], in Escherichia coli lacZ (P00722 from SWISSPROT), to be the general acid/base catalyst in the active site of the enzyme. Beta-galactosidase from E. coli has a TIM-barrel-like core surrounded by four other largely beta domains [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3CMG_A 3FN9_C 1YQ2_A 3K4D_B 3LPG_B 3LPF_A 3K4A_B 3K46_B 3GM8_A 3DEC_A ....
Probab=25.49 E-value=1.9e+02 Score=25.31 Aligned_cols=67 Identities=13% Similarity=0.120 Sum_probs=43.0
Q ss_pred CeEEEEEEEECCCccCc--cHHHHHHHHHHHHHHHcCCcEEEEEEEcCCHHHHHHHHhCCCEEeeccCC
Q 024161 181 EYLYISGLAVSKRFRRQ--KIATALMKACEVLAVLWGFEYLVLRAYEDDYGARRLYSNAGYRVVSSDLP 247 (271)
Q Consensus 181 ~~~yi~~l~V~p~~RGk--GiGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y~k~GF~~~~~~~~ 247 (271)
+-.+|.++.-++++-+. -+-.+.+..-+..+++.|+..|.+...+..+.-..+.-++|+-+..+.+.
T Consensus 13 k~~~l~Gv~~h~~~~~~g~a~~~~~~~~d~~l~k~~G~N~iR~~h~p~~~~~~~~cD~~GilV~~e~~~ 81 (298)
T PF02836_consen 13 KPIFLRGVNRHQDYPGLGRAMPDEAMERDLELMKEMGFNAIRTHHYPPSPRFYDLCDELGILVWQEIPL 81 (298)
T ss_dssp EEE-EEEEEE-S-BTTTBT---HHHHHHHHHHHHHTT-SEEEETTS--SHHHHHHHHHHT-EEEEE-S-
T ss_pred EEEEEEEEeeCcCcccccccCCHHHHHHHHHHHHhcCcceEEcccccCcHHHHHHHhhcCCEEEEeccc
Confidence 44567888877766444 45677788888889999999999976666666667778999999888655
No 170
>PF08901 DUF1847: Protein of unknown function (DUF1847); InterPro: IPR014997 This group of proteins are functionally uncharacterised. They contain 4 N-terminal cysteines that may form a zinc-binding domain.
Probab=25.09 E-value=1e+02 Score=24.66 Aligned_cols=42 Identities=12% Similarity=0.124 Sum_probs=28.6
Q ss_pred HHHHHHHHHHcCCcEEEEEEEc----CCHHHHHHHHhCCCEEeecc
Q 024161 204 MKACEVLAVLWGFEYLVLRAYE----DDYGARRLYSNAGYRVVSSD 245 (271)
Q Consensus 204 l~~~~~~a~~~g~~~i~l~v~~----~N~~A~~~Y~k~GF~~~~~~ 245 (271)
++..+++|+..|+++|-+..=. .-..-.++++..||++....
T Consensus 43 veEiieFak~mgykkiGiAfCiGL~~EA~~~~~iL~~~gFev~sV~ 88 (157)
T PF08901_consen 43 VEEIIEFAKRMGYKKIGIAFCIGLRKEARILAKILEANGFEVYSVC 88 (157)
T ss_pred HHHHHHHHHHcCCCeeeehhhHhHHHHHHHHHHHHHHCCCEEEEEE
Confidence 4667788888888888654321 22234477889999987763
No 171
>PRK09319 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II/unknown domain fusion protein; Provisional
Probab=24.38 E-value=1.1e+02 Score=29.74 Aligned_cols=58 Identities=14% Similarity=0.019 Sum_probs=42.1
Q ss_pred EEECCCccCccHHHHHHHHH---------------------------HHHHHHcCCcEEEEEEEcCCHHHHHHHHhCCCE
Q 024161 188 LAVSKRFRRQKIATALMKAC---------------------------EVLAVLWGFEYLVLRAYEDDYGARRLYSNAGYR 240 (271)
Q Consensus 188 l~V~p~~RGkGiGs~Ll~~~---------------------------~~~a~~~g~~~i~l~v~~~N~~A~~~Y~k~GF~ 240 (271)
+|+..+-||.|+..+|-.+. .+..+..|+++|.|-+ +|+.=+.-.+.+|.+
T Consensus 296 VYLrqEGRGiGL~nKl~aY~LQd~G~DTveAn~~lG~~~D~RdYgigAQIL~dLGI~kIrLLT--NNP~Ki~~L~~~GIe 373 (555)
T PRK09319 296 VYLRQEGRGIGLINKLKAYSLQDGGLDTVEANERLGFPADLRNYGVGAQILNDLGIKRLRLIT--NNPRKIAGLGGYGLE 373 (555)
T ss_pred EEeCCCCcchhHHHHHHHHhhhhcCCChhhhhhhcCCcccceehhHHHHHHHHcCCCEEEECC--CCHHHHHHHHhCCCE
Confidence 56777778888776555432 3345667899988876 577778888999999
Q ss_pred EeeccCC
Q 024161 241 VVSSDLP 247 (271)
Q Consensus 241 ~~~~~~~ 247 (271)
+++..|-
T Consensus 374 Vv~rvpl 380 (555)
T PRK09319 374 VVDRVPL 380 (555)
T ss_pred EEEEecc
Confidence 9988653
No 172
>PRK09607 rps11p 30S ribosomal protein S11P; Reviewed
Probab=24.30 E-value=3.4e+02 Score=21.03 Aligned_cols=45 Identities=18% Similarity=0.088 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHHcCCcEEEEEEEc-----------CCHHHHHHHHhCCCEEeec
Q 024161 200 ATALMKACEVLAVLWGFEYLVLRAYE-----------DDYGARRLYSNAGYRVVSS 244 (271)
Q Consensus 200 Gs~Ll~~~~~~a~~~g~~~i~l~v~~-----------~N~~A~~~Y~k~GF~~~~~ 244 (271)
+....+.+.+.|.+.|++.+.+-+-- .-+.|++-+.+.|+++...
T Consensus 55 Aq~aae~~~~~~~~~Gi~~v~v~vkG~Ggn~~~~~G~Gr~~airal~~~glkI~~I 110 (132)
T PRK09607 55 AMQAAEKAAEDAKEKGITGVHIKVRAPGGNGQKSPGPGAQAAIRALARAGLRIGRI 110 (132)
T ss_pred HHHHHHHHHHHHHHcCCcEEEEEEEecCCCCCcCCCCcHHHHHHHHHHCCCEEEEE
Confidence 33455667777889999999998865 4567999999999997655
No 173
>TIGR03628 arch_S11P archaeal ribosomal protein S11P. This model describes exclusively the archaeal ribosomal protein S11P. It excludes homologous ribosomal proteins S14 from eukaryotes and S11 from bacteria.
Probab=24.16 E-value=3.2e+02 Score=20.61 Aligned_cols=44 Identities=18% Similarity=0.098 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHcCCcEEEEEEEc-----------CCHHHHHHHHhCCCEEeec
Q 024161 201 TALMKACEVLAVLWGFEYLVLRAYE-----------DDYGARRLYSNAGYRVVSS 244 (271)
Q Consensus 201 s~Ll~~~~~~a~~~g~~~i~l~v~~-----------~N~~A~~~Y~k~GF~~~~~ 244 (271)
....+.+.+.|.+.|++.+.+.+.- ..+.|++-..+.|+++...
T Consensus 49 q~aa~~~~~~~~~~Gi~~v~v~ikG~gg~~~~~~G~Gr~~air~l~~~glkI~~I 103 (114)
T TIGR03628 49 MQAAGRAAEKAKERGITGLHIKVRAPGGNGQKSPGPGAQAAIRALARAGLRIGRI 103 (114)
T ss_pred HHHHHHHHHHHHHcCCcEEEEEEEecCCCCCCCCCCcHHHHHHHHHHCCCEEEEE
Confidence 3455667788889999999998854 5578999999999997655
No 174
>cd08357 Glo_EDI_BRP_like_18 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.
Probab=23.44 E-value=2e+02 Score=20.63 Aligned_cols=29 Identities=24% Similarity=0.394 Sum_probs=19.5
Q ss_pred EEEEEcCCHHHHHHHHh-CCCEEeeccCCcc
Q 024161 220 VLRAYEDDYGARRLYSN-AGYRVVSSDLPWF 249 (271)
Q Consensus 220 ~l~v~~~N~~A~~~Y~k-~GF~~~~~~~~~~ 249 (271)
.+.|. +-++|++||++ +||+.......|.
T Consensus 4 ~l~v~-Dl~~s~~FY~~~lG~~~~~~~~~~~ 33 (125)
T cd08357 4 AIPVR-DLEAARAFYGDVLGCKEGRSSETWV 33 (125)
T ss_pred EEEeC-CHHHHHHHHHHhcCCEEeeccCCcc
Confidence 34443 33679999986 8999876654554
No 175
>PF12953 DUF3842: Domain of unknown function (DUF3842); InterPro: IPR024208 This family of proteins has no known function.
Probab=22.96 E-value=2.2e+02 Score=22.01 Aligned_cols=47 Identities=11% Similarity=-0.069 Sum_probs=36.1
Q ss_pred ccCccHHHHHHHHHHHHHHHcCCcEEEEEEEcCCHHHHHHHHhCCCEEeec
Q 024161 194 FRRQKIATALMKACEVLAVLWGFEYLVLRAYEDDYGARRLYSNAGYRVVSS 244 (271)
Q Consensus 194 ~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y~k~GF~~~~~ 244 (271)
=||=|||+.+++.+-+...+ .+.+...-.|.-|-.-..|.|-..-.+
T Consensus 7 GQGGGiG~~iv~~lr~~~~~----~~eI~AlGTNa~AT~~MlKaGA~~gAT 53 (131)
T PF12953_consen 7 GQGGGIGKQIVEKLRKELPE----EVEIIALGTNAIATSAMLKAGANEGAT 53 (131)
T ss_pred CCCChhHHHHHHHHHHhCCC----CcEEEEEehhHHHHHHHHHcCCCCccc
Confidence 47889999999988555433 366666668888999999999876554
No 176
>cd07252 BphC1-RGP6_N_like N-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1.13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of 2,3-dihydroxybiphenyl 1,2-dioxygenases. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its N-
Probab=22.55 E-value=1e+02 Score=22.45 Aligned_cols=28 Identities=21% Similarity=0.288 Sum_probs=20.3
Q ss_pred CcEEEEEEEcCCHHHHHHHHh-CCCEEeec
Q 024161 216 FEYLVLRAYEDDYGARRLYSN-AGYRVVSS 244 (271)
Q Consensus 216 ~~~i~l~v~~~N~~A~~~Y~k-~GF~~~~~ 244 (271)
+..+.+.|..- ..|++||+. +||+....
T Consensus 3 l~~v~l~v~Dl-~~s~~FY~~~LG~~~~~~ 31 (120)
T cd07252 3 LGYLGVESSDL-DAWRRFATDVLGLQVGDR 31 (120)
T ss_pred ccEEEEEeCCH-HHHHHHHHhccCceeccC
Confidence 44566776644 569999977 79998655
No 177
>cd07240 ED_TypeI_classII_N N-terminal domain of type I, class II extradiol dioxygenases; non-catalytic domain. This family contains the N-terminal, non-catalytic, domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this fa
Probab=22.23 E-value=2.5e+02 Score=19.75 Aligned_cols=30 Identities=27% Similarity=0.332 Sum_probs=21.0
Q ss_pred cEEEEEEEcCCHHHHHHHHh-CCCEEeeccCC
Q 024161 217 EYLVLRAYEDDYGARRLYSN-AGYRVVSSDLP 247 (271)
Q Consensus 217 ~~i~l~v~~~N~~A~~~Y~k-~GF~~~~~~~~ 247 (271)
..+.+.|. +=+.+++||++ +||+.......
T Consensus 4 ~hv~l~v~-d~~~~~~FY~~~lg~~~~~~~~~ 34 (117)
T cd07240 4 AYAELEVP-DLERALEFYTDVLGLTVLDRDAG 34 (117)
T ss_pred eEEEEecC-CHHHHHHHHHhccCcEEEeecCC
Confidence 34445544 33579999999 99999877544
No 178
>PRK14019 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein; Provisional
Probab=21.90 E-value=1.2e+02 Score=27.82 Aligned_cols=56 Identities=9% Similarity=-0.060 Sum_probs=37.2
Q ss_pred EEECCCccCccHHHHHHHH------------------HHHHHHHcCCcEEEEEEEcCCHHHHHHHHhCCCEEeeccC
Q 024161 188 LAVSKRFRRQKIATALMKA------------------CEVLAVLWGFEYLVLRAYEDDYGARRLYSNAGYRVVSSDL 246 (271)
Q Consensus 188 l~V~p~~RGkGiGs~Ll~~------------------~~~~a~~~g~~~i~l~v~~~N~~A~~~Y~k~GF~~~~~~~ 246 (271)
+|+..+-||.|+..++-.. ..+..+..|++++.|-+ |+.-+.-.+.+|.++++..+
T Consensus 290 vyL~qegrgigl~~k~~~~~~an~~lg~~~d~R~y~igaqIL~~Lgv~~irLlT---np~K~~~L~~~Gi~V~~~~~ 363 (367)
T PRK14019 290 VLLNCGDDGEHLLDRFRAEEAAAALKRRPVDYRTYGIGAQILRDLGVGKMRLLS---SPRKFPSMSGFGLEVTGYVP 363 (367)
T ss_pred EEEccCCchhhHHHhhhhhhhhhhhcCCCcccceehHHHHHHHHcCCCeEEECC---CcHHHHhhhhCCcEEEEEec
Confidence 4667776666665554210 14455677899999885 55566667888989887643
No 179
>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.
Probab=21.90 E-value=1.2e+02 Score=21.59 Aligned_cols=29 Identities=14% Similarity=0.419 Sum_probs=21.4
Q ss_pred CCcEEEEEEEcCCHHHHHHHHh-CCCEEeec
Q 024161 215 GFEYLVLRAYEDDYGARRLYSN-AGYRVVSS 244 (271)
Q Consensus 215 g~~~i~l~v~~~N~~A~~~Y~k-~GF~~~~~ 244 (271)
++..+.+.|.. =.+|++||++ +||+....
T Consensus 3 ~~~hi~l~v~d-~~~a~~fy~~~lG~~~~~~ 32 (125)
T cd08352 3 GIHHVAIICSD-YEKSKEFYVEILGFKVIRE 32 (125)
T ss_pred ccceEEEEcCC-HHHHHHHHHHhcCCEEeee
Confidence 45667777753 3679999975 99998654
No 180
>PRK08815 GTP cyclohydrolase; Provisional
Probab=21.50 E-value=1.3e+02 Score=27.69 Aligned_cols=34 Identities=15% Similarity=-0.023 Sum_probs=25.0
Q ss_pred HHHcCCcEEEEEEEcCCHHHHHHHHhCCCEEeeccC
Q 024161 211 AVLWGFEYLVLRAYEDDYGARRLYSNAGYRVVSSDL 246 (271)
Q Consensus 211 a~~~g~~~i~l~v~~~N~~A~~~Y~k~GF~~~~~~~ 246 (271)
.+..|++++.|-+. |+.-..-.+.+|.++++..+
T Consensus 308 L~dLGV~kirLLTn--np~K~~~L~g~gieVv~~vp 341 (375)
T PRK08815 308 LRGLGITRVRLLTN--NPTKAERLRAAGIEVEDRIR 341 (375)
T ss_pred HHHcCCCeEEECCC--CHHHHHHHHhCCCEEEEEec
Confidence 34568899988753 66556677899999987764
No 181
>cd07265 2_3_CTD_N N-terminal domain of catechol 2,3-dioxygenase. This subfamily contains the N-terminal, non-catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the N-terminal do
Probab=21.13 E-value=1.1e+02 Score=22.25 Aligned_cols=29 Identities=24% Similarity=0.212 Sum_probs=20.6
Q ss_pred CcEEEEEEEcCCHHHHHHHHh-CCCEEeecc
Q 024161 216 FEYLVLRAYEDDYGARRLYSN-AGYRVVSSD 245 (271)
Q Consensus 216 ~~~i~l~v~~~N~~A~~~Y~k-~GF~~~~~~ 245 (271)
+..+.+.|..- +++++||++ +||+.....
T Consensus 5 l~hv~l~v~Dl-~~s~~FY~~~lG~~~~~~~ 34 (122)
T cd07265 5 PGHVQLRVLDL-EEAIKHYREVLGLDEVGRD 34 (122)
T ss_pred EeEEEEEeCCH-HHHHHHHHhccCCEeeeec
Confidence 34566666543 679999976 899987664
No 182
>COG0346 GloA Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]
Probab=21.00 E-value=1.1e+02 Score=21.54 Aligned_cols=31 Identities=16% Similarity=0.287 Sum_probs=22.3
Q ss_pred CcEEEEEEEcCCHHHHHHHHh-CCCEEeeccCC
Q 024161 216 FEYLVLRAYEDDYGARRLYSN-AGYRVVSSDLP 247 (271)
Q Consensus 216 ~~~i~l~v~~~N~~A~~~Y~k-~GF~~~~~~~~ 247 (271)
+..+.+.|..- +.|+.||+. +||+.+.....
T Consensus 3 l~hv~l~v~dl-~~s~~FY~~~LG~~~~~~~~~ 34 (138)
T COG0346 3 IHHVTLAVPDL-EASIDFYTDVLGLRLVKDTVN 34 (138)
T ss_pred eEEEEEeeCCH-hHhHHHHHhhcCCeeeeeccc
Confidence 34455666543 569999987 99999887544
No 183
>cd07255 Glo_EDI_BRP_like_12 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.
Probab=20.92 E-value=2.3e+02 Score=20.33 Aligned_cols=32 Identities=16% Similarity=0.132 Sum_probs=22.8
Q ss_pred cEEEEEEEcCCHHHHHHHHh-CCCEEeeccCCcc
Q 024161 217 EYLVLRAYEDDYGARRLYSN-AGYRVVSSDLPWF 249 (271)
Q Consensus 217 ~~i~l~v~~~N~~A~~~Y~k-~GF~~~~~~~~~~ 249 (271)
..+.+.|..- ..+.+||.+ +||+.......+.
T Consensus 4 ~hi~l~v~d~-~~~~~Fy~~~lG~~~~~~~~~~~ 36 (125)
T cd07255 4 GAVTLRVADL-ERSLAFYQDVLGLEVLERTDSTA 36 (125)
T ss_pred EEEEEEECCH-HHHHHHHHhccCcEEEEcCCCEE
Confidence 4566666544 468999986 8999988855444
No 184
>PLN02831 Bifunctional GTP cyclohydrolase II/ 3,4-dihydroxy-2-butanone-4-phosphate synthase
Probab=20.82 E-value=1.4e+02 Score=28.26 Aligned_cols=36 Identities=14% Similarity=0.034 Sum_probs=26.7
Q ss_pred HHHHHcCCcEEEEEEEcCCHHHHHHHHhCCCEEeeccC
Q 024161 209 VLAVLWGFEYLVLRAYEDDYGARRLYSNAGYRVVSSDL 246 (271)
Q Consensus 209 ~~a~~~g~~~i~l~v~~~N~~A~~~Y~k~GF~~~~~~~ 246 (271)
+..+..|++++.|-+ +|+.=+.-.+.+|.++++..+
T Consensus 374 qIL~dLGI~~irLLT--NNp~K~~~L~~~GieVve~vp 409 (450)
T PLN02831 374 QILRDLGVRTMRLMT--NNPAKYTGLKGYGLAVVGRVP 409 (450)
T ss_pred HHHHHcCCCEEEECC--CCHHHHHHHhhCCCEEEEEec
Confidence 334566888888875 467667778899999987764
No 185
>PRK09311 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein; Provisional
Probab=20.77 E-value=1.4e+02 Score=27.85 Aligned_cols=36 Identities=14% Similarity=0.035 Sum_probs=26.0
Q ss_pred HHHHHcCCcEEEEEEEcCCHHHHHHHHhCCCEEeeccC
Q 024161 209 VLAVLWGFEYLVLRAYEDDYGARRLYSNAGYRVVSSDL 246 (271)
Q Consensus 209 ~~a~~~g~~~i~l~v~~~N~~A~~~Y~k~GF~~~~~~~ 246 (271)
+..+..|++++.|-+ +|+.=+.-.+.+|.++++..+
T Consensus 340 qIL~~LGv~~irLLT--nnp~K~~~L~~~GieV~~~v~ 375 (402)
T PRK09311 340 QILVDLGVRSMRLLT--NNPRKIAGLQGYGLHVTERVP 375 (402)
T ss_pred HHHHHcCCCEEEECC--CCHHHHHHHhhCCCEEEEEec
Confidence 334566888887775 466666677899999987754
No 186
>cd07254 Glo_EDI_BRP_like_20 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and types I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.
Probab=20.62 E-value=3.2e+02 Score=19.49 Aligned_cols=31 Identities=16% Similarity=0.148 Sum_probs=19.5
Q ss_pred EEEEEEcCC-HHHHHHHHhC-CCEEeeccCCcc
Q 024161 219 LVLRAYEDD-YGARRLYSNA-GYRVVSSDLPWF 249 (271)
Q Consensus 219 i~l~v~~~N-~~A~~~Y~k~-GF~~~~~~~~~~ 249 (271)
+++.....| ..+.+||++. ||+.....+.+.
T Consensus 3 ~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~ 35 (120)
T cd07254 3 FHVALNVDDLEASIAFYSKLFGVEPTKVRDDYA 35 (120)
T ss_pred EEEEEEeCCHHHHHHHHHHHhCCeEecccCCee
Confidence 333333334 6799999665 998876655443
No 187
>cd08358 Glo_EDI_BRP_like_21 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.
Probab=20.41 E-value=2e+02 Score=21.85 Aligned_cols=19 Identities=16% Similarity=0.359 Sum_probs=14.9
Q ss_pred CCHHHHHHHH-hCCCEEeec
Q 024161 226 DDYGARRLYS-NAGYRVVSS 244 (271)
Q Consensus 226 ~N~~A~~~Y~-k~GF~~~~~ 244 (271)
+-++|++||+ .+||+...+
T Consensus 12 DlerSi~FY~~vLG~~~~~~ 31 (127)
T cd08358 12 NRNKTIKFYREVLGMKVLRH 31 (127)
T ss_pred CHHHHHHHHHHhcCCEEEee
Confidence 4568999995 589998664
No 188
>PRK00756 acyltransferase NodA; Provisional
Probab=20.39 E-value=2.4e+02 Score=22.90 Aligned_cols=58 Identities=10% Similarity=0.013 Sum_probs=37.8
Q ss_pred EEEEEEEECCCccCccHHHHHHHHHHHHHHHcCCcEEEEEEEcCCHHHHHHHHhCCCEE
Q 024161 183 LYISGLAVSKRFRRQKIATALMKACEVLAVLWGFEYLVLRAYEDDYGARRLYSNAGYRV 241 (271)
Q Consensus 183 ~yi~~l~V~p~~RGkGiGs~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y~k~GF~~ 241 (271)
+.+.-.+|.|+..|.||+..| ..+.-...+.|..--.-+|-..-..-+.=+-|.|...
T Consensus 86 aElGLygVRpDLEGlGi~~S~-r~m~PvLq~LgVPF~FGtVR~al~~Hv~R~~r~g~~t 143 (196)
T PRK00756 86 AELGLYGVRPDLEGLGIAHSI-RAMYPVLQELGVPFAFGTVRHALRNHVERLCRNGLAT 143 (196)
T ss_pred EEeeeeeeccccccccchhhH-HHHHHHHHhcCCCeecccchHHHHHHHHHHhccCcce
Confidence 447778899999999998876 5666667788887666665443221222223556554
No 189
>PF04015 DUF362: Domain of unknown function (DUF362) ; InterPro: IPR007160 This domain is found in some iron-sulphur proteins.
Probab=20.15 E-value=1.8e+02 Score=23.81 Aligned_cols=46 Identities=11% Similarity=0.257 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHHHHcCCcEEEEEEEcCC--HHHHHHHHhCCCEEeec
Q 024161 199 IATALMKACEVLAVLWGFEYLVLRAYEDD--YGARRLYSNAGYRVVSS 244 (271)
Q Consensus 199 iGs~Ll~~~~~~a~~~g~~~i~l~v~~~N--~~A~~~Y~k~GF~~~~~ 244 (271)
.--++++++++..++.|.+.+.+.-.... ......+++.||.....
T Consensus 20 T~P~vv~avv~~l~~~g~~~i~i~e~~~~~~~~~~~~~~~~G~~~~~~ 67 (206)
T PF04015_consen 20 THPEVVRAVVEMLKEAGAKEIIIAESPGSGAADTREVFKRSGYEEIAE 67 (206)
T ss_pred CCHHHHHHHHHHHHHcCCCceEEEeCCCcchHhHHHHHHHcchhhHHH
Confidence 33578999999999999986666655433 46889999999998755
Done!