BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 024162
         (271 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|2LD4|A Chain A, Solution Structure Of The N-Terminal Domain Of Human
           Anamorsin
          Length = 176

 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 18/113 (15%)

Query: 54  SIDTVLS--ISSSHELPGDQLLEEISRVLKPGGTILIYKKLTS--DKGDVDKAISALEGK 109
           S D +LS  +  S  L   ++L EI+R+L+PGG + + + + +  D     K  S L   
Sbjct: 63  SFDIILSGLVPGSTTLHSAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSA 122

Query: 110 LLLAGFLDAQRIQLKSVVPAEVVS--------------FGVKGKKPTWKIGSS 148
           L L+G ++ + +Q + + P EV S                + GKKP +++GSS
Sbjct: 123 LTLSGLVEVKELQREPLTPEEVQSVREHLGHESDNLLFVQITGKKPNFEVGSS 175


>pdb|2YUI|A Chain A, Solution Structure Of The N-Terminal Domain In Human
           Cytokine-Induced Apoptosis Inhibitor Anamorsin
          Length = 182

 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 18/112 (16%)

Query: 54  SIDTVLS--ISSSHELPGDQLLEEISRVLKPGGTILIYKKLTS--DKGDVDKAISALEGK 109
           S D +LS  +  S  L   ++L EI+R+L+PGG + + + + +  D     K  S L   
Sbjct: 66  SFDIILSGLVPGSTTLHSAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSA 125

Query: 110 LLLAGFLDAQRIQLKSVVPAEVVS--------------FGVKGKKPTWKIGS 147
           L L+G ++ + +Q + + P EV S                + GKKP +++GS
Sbjct: 126 LTLSGLVEVKELQREPLTPEEVQSVREHLGHESDNLLFVQITGKKPNFEVGS 177


>pdb|3BUS|A Chain A, Crystal Structure Of Rebm
 pdb|3BUS|B Chain B, Crystal Structure Of Rebm
          Length = 273

 Score = 39.3 bits (90), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 1/42 (2%)

Query: 48  LPVESFSIDTVLSISSSHELPG-DQLLEEISRVLKPGGTILI 88
           LP E  S D V ++ S H  P   + L E +RVL+PGGT+ I
Sbjct: 123 LPFEDASFDAVWALESLHHXPDRGRALREXARVLRPGGTVAI 164


>pdb|3RBV|A Chain A, Crystal Structure Of Kijd10, A 3-Ketoreductase From
           Actinomadura Kijaniata Incomplex With Nadp
 pdb|3RC1|A Chain A, Crystal Structure Of Kijd10, A 3-Ketoreductase From
           Actinomadura Kijaniata Incomplex With Nadp And
           Tdp-Benzene
 pdb|3RC2|A Chain A, Crystal Structure Of Kijd10, A 3-Ketoreductase From
           Actinomadura Kijaniata In Complex With Tdp-Benzene And
           Nadp; Open Conformation
          Length = 350

 Score = 34.7 bits (78), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 6/98 (6%)

Query: 67  LPGDQLLEEISRVLKPGGTILIYKKLTSDKGDVDK--AISALEGKLLLAGFLDAQRIQLK 124
           LP     E I R L+ G  +L  K LT+D+   ++  A++   G LL+  F+     Q +
Sbjct: 97  LPAVLHAEWIDRALRAGKHVLAEKPLTTDRPQAERLFAVARERGLLLMENFMFLHHPQHR 156

Query: 125 SVVPAEVVSFGVKGKKPTWKIGSSFAIKKAPKSLAKLQ 162
            V  A+++  GV G+  +    +SF I   P+   + Q
Sbjct: 157 QV--ADMLDEGVIGEIRS--FAASFTIPPKPQGDIRYQ 190


>pdb|3RC7|A Chain A, Crystal Structure Of The Y186f Mutant Of Kijd10, A
           3-Ketoreductase From Actinomadura Kijaniata In Complex
           With Tdp-Benzene And Nadp
          Length = 350

 Score = 34.7 bits (78), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 6/98 (6%)

Query: 67  LPGDQLLEEISRVLKPGGTILIYKKLTSDKGDVDK--AISALEGKLLLAGFLDAQRIQLK 124
           LP     E I R L+ G  +L  K LT+D+   ++  A++   G LL+  F+     Q +
Sbjct: 97  LPAVLHAEWIDRALRAGKHVLAEKPLTTDRPQAERLFAVARERGLLLMENFMFLHHPQHR 156

Query: 125 SVVPAEVVSFGVKGKKPTWKIGSSFAIKKAPKSLAKLQ 162
            V  A+++  GV G+  +    +SF I   P+   + Q
Sbjct: 157 QV--ADMLDEGVIGEIRS--FAASFTIPPKPQGDIRYQ 190


>pdb|3HNR|A Chain A, Crystal Structure Of A Probable Methyltransferase
           Bt9727_4108 From Bacillus Thuringiensis Subsp. Northeast
           Structural Genomics Consortium Target Id Bur219
          Length = 220

 Score = 33.9 bits (76), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 7/71 (9%)

Query: 39  ITQASSLS-QLPVESFSIDTVLSISSSHELPGDQ---LLEEISRVLKPGGTILIYKKLTS 94
           IT+   LS ++P    SIDT++S  + H L  D+    + + S++L  GG I+    + +
Sbjct: 93  ITEGDFLSFEVPT---SIDTIVSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFADTIFA 149

Query: 95  DKGDVDKAISA 105
           D+   DK + A
Sbjct: 150 DQDAYDKTVEA 160


>pdb|3RCB|A Chain A, Crystal Structure Of The K102e Mutant Of Kijd10, A
           3-Ketoreductase From Actinomadura Kijaniata In Complex
           With Tdp-Benzene And Nadp
          Length = 350

 Score = 33.5 bits (75), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 6/98 (6%)

Query: 67  LPGDQLLEEISRVLKPGGTILIYKKLTSDKGDVDK--AISALEGKLLLAGFLDAQRIQLK 124
           LP     E I R L+ G  +L  + LT+D+   ++  A++   G LL+  F+     Q +
Sbjct: 97  LPAVLHAEWIDRALRAGKHVLAEEPLTTDRPQAERLFAVARERGLLLMENFMFLHHPQHR 156

Query: 125 SVVPAEVVSFGVKGKKPTWKIGSSFAIKKAPKSLAKLQ 162
            V  A+++  GV G+  +    +SF I   P+   + Q
Sbjct: 157 QV--ADMLDEGVIGEIRS--FAASFTIPPKPQGDIRYQ 190


>pdb|4HG2|A Chain A, The Structure Of A Putative Type Ii Methyltransferase From
           Anaeromyxobacter Dehalogenans.
 pdb|4HG2|B Chain B, The Structure Of A Putative Type Ii Methyltransferase From
           Anaeromyxobacter Dehalogenans
          Length = 257

 Score = 33.1 bits (74), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 23/106 (21%), Positives = 46/106 (43%), Gaps = 8/106 (7%)

Query: 25  DLGDEAVEQC--DPQIITQASSLSQLPVESFSIDTVLSISSSHELPGDQLLEEISRVLKP 82
           D G+  + Q    P++    +      +   S+D  ++  + H    D+   E+ RV +P
Sbjct: 68  DPGEAQIRQALRHPRVTYAVAPAEDTGLPPASVDVAIAAQAXHWFDLDRFWAELRRVARP 127

Query: 83  GGTILIYKKLTSDKGDVDKAISALEGKL---LLAGFLDAQRIQLKS 125
           G    ++  +T     VD  + A+  +L   LLA     +R+ ++S
Sbjct: 128 GA---VFAAVTYGLTRVDPEVDAVVDRLYHGLLARDWPPERVHVES 170


>pdb|3RC9|A Chain A, Crystal Structure Of The K102a Mutant Of Kijd10, A
           3-Ketoreductase From Actinomadura Kijaniata In Complex
           With Tdp-Benzene And Nadp
          Length = 350

 Score = 32.7 bits (73), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 6/98 (6%)

Query: 67  LPGDQLLEEISRVLKPGGTILIYKKLTSDKGDVDK--AISALEGKLLLAGFLDAQRIQLK 124
           LP     E I R L+ G  +L    LT+D+   ++  A++   G LL+  F+     Q +
Sbjct: 97  LPAVLHAEWIDRALRAGKHVLAEAPLTTDRPQAERLFAVARERGLLLMENFMFLHHPQHR 156

Query: 125 SVVPAEVVSFGVKGKKPTWKIGSSFAIKKAPKSLAKLQ 162
            V  A+++  GV G+  +    +SF I   P+   + Q
Sbjct: 157 QV--ADMLDEGVIGEIRS--FAASFTIPPKPQGDIRYQ 190


>pdb|3DDJ|A Chain A, Crystal Structure Of A Cbs Domain-Containing Protein In
           Complex With Amp (Sso3205) From Sulfolobus Solfataricus
           At 1.80 A Resolution
          Length = 296

 Score = 32.3 bits (72), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 30/68 (44%), Gaps = 3/68 (4%)

Query: 182 KKPQLPSVGDCEVGSTRKACKNCICGRA-EAEEKVEKLGLTMDQLKNPQSAC-GSCGLGD 239
           K P + S  D  +GS  K       GR   A EK+E L  T D L   +S C  SC  GD
Sbjct: 28  KNPPILSKED-RLGSAFKKINEGGIGRIIVANEKIEGLLTTRDLLSTVESYCKDSCSQGD 86

Query: 240 AFRCGTCP 247
            +   T P
Sbjct: 87  LYHISTTP 94


>pdb|2ZFU|A Chain A, Structure Of The Methyltransferase-Like Domain Of
           Nucleomethylin
 pdb|2ZFU|B Chain B, Structure Of The Methyltransferase-Like Domain Of
           Nucleomethylin
          Length = 215

 Score = 32.0 bits (71), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 3/72 (4%)

Query: 35  DPQIITQASSLSQLPVESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYKKLTS 94
           DP++      ++Q+P+E  S+D  +   S         LEE +RVLKPGG +L   +++S
Sbjct: 98  DPRVTV--CDMAQVPLEDESVDVAVFCLSLMGTNIRDFLEEANRVLKPGG-LLKVAEVSS 154

Query: 95  DKGDVDKAISAL 106
              DV   + A+
Sbjct: 155 RFEDVRTFLRAV 166


>pdb|1P91|A Chain A, Crystal Structure Of Rlma(I) Enzyme: 23s Rrna N1-G745
           Methyltransferase (Northeast Structural Genomics
           Consortium Target Er19)
 pdb|1P91|B Chain B, Crystal Structure Of Rlma(I) Enzyme: 23s Rrna N1-G745
           Methyltransferase (Northeast Structural Genomics
           Consortium Target Er19)
          Length = 269

 Score = 30.0 bits (66), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 6/52 (11%)

Query: 36  PQIITQASSLSQLPVESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTIL 87
           PQ+    +S  +LP    S D ++ I +  +       EE++RV+KPGG ++
Sbjct: 130 PQVTFCVASSHRLPFSDTSXDAIIRIYAPCKA------EELARVVKPGGWVI 175


>pdb|2PXX|A Chain A, Human Putative Methyltransferase Mgc2408
          Length = 215

 Score = 29.6 bits (65), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 16/68 (23%)

Query: 36  PQIITQASSLSQLPVESFSIDTVL----------------SISSSHELPGDQLLEEISRV 79
           PQ+  +   + +L   S S D VL                ++SS      DQ+L E+SRV
Sbjct: 89  PQLRWETMDVRKLDFPSASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRV 148

Query: 80  LKPGGTIL 87
           L PGG  +
Sbjct: 149 LVPGGRFI 156


>pdb|2PSG|A Chain A, Refined Structure Of Porcine Pepsinogen At 1.8 Angstroms
           Resolution
          Length = 370

 Score = 29.3 bits (64), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 15  PVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTV 58
           P SA+ N   D+G  A E  D +++   SS+  LP   F+ID V
Sbjct: 268 PTSAIANIQSDIG--ASENSDGEMVISCSSIDSLPDIVFTIDGV 309


>pdb|3PSG|A Chain A, The High Resolution Crystal Structure Of Porcine
           Pepsinogen
          Length = 370

 Score = 29.3 bits (64), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 15  PVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTV 58
           P SA+ N   D+G  A E  D +++   SS+  LP   F+ID V
Sbjct: 268 PTSAIANIQSDIG--ASENSDGEMVISCSSIDSLPDIVFTIDGV 309


>pdb|3PEP|A Chain A, Revised 2.3 Angstroms Structure Of Porcine Pepsin.
           Evidence For A Flexible Subdomain
          Length = 326

 Score = 29.3 bits (64), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 15  PVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTV 58
           P SA+ N   D+G  A E  D +++   SS+  LP   F+ID V
Sbjct: 224 PTSAIANIQSDIG--ASENSDGEMVISCSSIDSLPDIVFTIDGV 265


>pdb|4PEP|A Chain A, The Molecular And Crystal Structures Of Monoclinic Porcine
           Pepsin Refined At 1.8 Angstroms Resolution
          Length = 326

 Score = 28.9 bits (63), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 15  PVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTV 58
           P SA+ N   D+G  A E  D +++   SS+  LP   F+ID V
Sbjct: 224 PTSAIANIQSDIG--ASENSDGEMVISCSSIDSLPDIVFTIDGV 265


>pdb|1ZLI|A Chain A, Crystal Structure Of The Tick Carboxypeptidase Inhibitor
           In Complex With Human Carboxypeptidase B
          Length = 309

 Score = 28.9 bits (63), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 12/28 (42%), Positives = 15/28 (53%)

Query: 190 GDCEVGSTRKACKNCICGRAEAEEKVEK 217
           G CE+G++R  C    CG A   EK  K
Sbjct: 149 GWCEIGASRNPCDETYCGPAAESEKETK 176


>pdb|1VE3|A Chain A, Crystal Structure Of Ph0226 Protein From Pyrococcus
           Horikoshii Ot3
 pdb|1VE3|B Chain B, Crystal Structure Of Ph0226 Protein From Pyrococcus
           Horikoshii Ot3
          Length = 227

 Score = 28.9 bits (63), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 3/46 (6%)

Query: 47  QLPVESFSIDTVL---SISSSHELPGDQLLEEISRVLKPGGTILIY 89
           +L  E  + D V+   SI     L  +Q+ +E+ RVLKP G  + Y
Sbjct: 96  KLSFEDKTFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIXY 141


>pdb|1KWM|A Chain A, Human Procarboxypeptidase B: Three-Dimensional Structure
           And Implications For Thrombin-Activatable Fibrinolysis
           Inhibitor (Tafi)
 pdb|1KWM|B Chain B, Human Procarboxypeptidase B: Three-Dimensional Structure
           And Implications For Thrombin-Activatable Fibrinolysis
           Inhibitor (Tafi)
          Length = 402

 Score = 28.9 bits (63), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 12/28 (42%), Positives = 15/28 (53%)

Query: 190 GDCEVGSTRKACKNCICGRAEAEEKVEK 217
           G CE+G++R  C    CG A   EK  K
Sbjct: 242 GWCEIGASRNPCDETYCGPAAESEKETK 269


>pdb|2YQZ|A Chain A, Crystal Structure Of Hypothetical Methyltransferase
           Ttha0223 From Thermus Thermophilus Hb8 Complexed With
           S-adenosylmethionine
 pdb|2YQZ|B Chain B, Crystal Structure Of Hypothetical Methyltransferase
           Ttha0223 From Thermus Thermophilus Hb8 Complexed With
           S-adenosylmethionine
 pdb|2YR0|A Chain A, Crystal Structure Of Hypothetical Methyltransferase
           Ttha0223 From Thermus Thermophilus Hb8
 pdb|2YR0|B Chain B, Crystal Structure Of Hypothetical Methyltransferase
           Ttha0223 From Thermus Thermophilus Hb8
          Length = 263

 Score = 28.5 bits (62), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 2/50 (4%)

Query: 39  ITQASSLSQLPVESFSIDTVLSISSSHELP-GDQLLEEISRVLKPGGTIL 87
           + QA + + +P+   S+  V+ +   H +P   ++L E  RVLKPGG +L
Sbjct: 90  VVQADARA-IPLPDESVHGVIVVHLWHLVPDWPKVLAEAIRVLKPGGALL 138


>pdb|5PEP|A Chain A, X-Ray Analyses Of Aspartic Proteases. Ii.
           Three-Dimensional Structure Of The Hexagonal Crystal
           Form Of Porcine Pepsin At 2.3 Angstroms Resolution
          Length = 326

 Score = 27.7 bits (60), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 2/44 (4%)

Query: 15  PVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTV 58
           P SA+ N   D+G  A E  D +++   SS++ LP   F+I+ V
Sbjct: 224 PTSAIANIQSDIG--ASENSDGEMVISCSSIASLPDIVFTINGV 265


>pdb|3MGG|A Chain A, Crystal Structure Of Methyl Transferase From
           Methanosarcina Mazei
 pdb|3MGG|B Chain B, Crystal Structure Of Methyl Transferase From
           Methanosarcina Mazei
          Length = 276

 Score = 27.7 bits (60), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 2/49 (4%)

Query: 41  QASSLSQLPVESFSIDTVLS-ISSSHELPGDQLLEEISRVLKPGGTILI 88
           QA+  S LP E  S D +       H    ++ L+ + +VLKPGGTI +
Sbjct: 93  QANIFS-LPFEDSSFDHIFVCFVLEHLQSPEEALKSLKKVLKPGGTITV 140


>pdb|1F34|A Chain A, Crystal Structure Of Ascaris Pepsin Inhibitor-3 Bound To
           Porcine Pepsin
          Length = 326

 Score = 27.3 bits (59), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 15  PVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTV 58
           P SA+ N   D+G  A E  D +++   SS+  LP   F+I+ V
Sbjct: 224 PTSAIANIQSDIG--ASENSDGEMVISCSSIDSLPDIVFTINGV 265


>pdb|1PSA|A Chain A, Structure Of A Pepsin(Slash)renin Inhibitor Complex
           Reveals A Novel Crystal Packing Induced By Minor
           Chemical Alterations In The Inhibitor
 pdb|1PSA|B Chain B, Structure Of A Pepsin(Slash)renin Inhibitor Complex
           Reveals A Novel Crystal Packing Induced By Minor
           Chemical Alterations In The Inhibitor
 pdb|1YX9|A Chain A, Effect Of Dimethyl Sulphoxide On The Crystal Structure Of
           Porcine Pepsin
          Length = 326

 Score = 27.3 bits (59), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 15  PVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTV 58
           P SA+ N   D+G  A E  D +++   SS+  LP   F+I+ V
Sbjct: 224 PTSAIANIQSDIG--ASENSDGEMVISCSSIDSLPDIVFTINGV 265


>pdb|1NWB|A Chain A, Solution Nmr Structure Of Protein Aq_1857 From Aquifex
           Aeolicus: Northeast Structural Genomics Consortium
           Target Qr6
          Length = 124

 Score = 27.3 bits (59), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 2/36 (5%)

Query: 209 AEAEEKVEKLGLTMDQLKNPQSACGSCGLGDAFRCG 244
           AE +  V+ +G     ++NP +A GSCG G +F CG
Sbjct: 83  AELDYVVDFMGGGF-TIRNP-NATGSCGCGSSFSCG 116


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.315    0.133    0.378 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,827,922
Number of Sequences: 62578
Number of extensions: 237745
Number of successful extensions: 601
Number of sequences better than 100.0: 32
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 594
Number of HSP's gapped (non-prelim): 33
length of query: 271
length of database: 14,973,337
effective HSP length: 97
effective length of query: 174
effective length of database: 8,903,271
effective search space: 1549169154
effective search space used: 1549169154
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 51 (24.3 bits)