Query 024162
Match_columns 271
No_of_seqs 300 out of 2030
Neff 6.9
Searched_HMMs 29240
Date Mon Mar 25 03:27:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024162.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024162hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ld4_A Anamorsin; methyltransf 99.6 1.1E-15 3.6E-20 127.0 10.2 140 3-149 14-176 (176)
2 4gek_A TRNA (CMO5U34)-methyltr 99.1 2.3E-10 7.8E-15 101.9 11.2 75 15-93 104-181 (261)
3 3dh0_A SAM dependent methyltra 99.0 7.7E-10 2.6E-14 93.9 9.5 119 16-143 71-195 (219)
4 1vl5_A Unknown conserved prote 99.0 1.2E-09 4.2E-14 95.5 9.6 75 15-92 67-142 (260)
5 3dtn_A Putative methyltransfer 99.0 3.1E-09 1.1E-13 91.2 11.3 117 15-143 76-228 (234)
6 3dlc_A Putative S-adenosyl-L-m 99.0 3.4E-09 1.2E-13 89.2 10.9 105 16-122 75-202 (219)
7 4hg2_A Methyltransferase type 99.0 4.9E-10 1.7E-14 99.6 5.6 70 15-93 69-138 (257)
8 3h2b_A SAM-dependent methyltra 98.9 2.6E-09 8.8E-14 89.7 6.5 100 15-122 71-181 (203)
9 3hnr_A Probable methyltransfer 98.9 1.4E-08 4.9E-13 86.0 10.9 70 15-92 75-147 (220)
10 1xxl_A YCGJ protein; structura 98.9 1E-08 3.6E-13 88.7 10.0 76 15-93 51-127 (239)
11 3i9f_A Putative type 11 methyl 98.8 5.3E-09 1.8E-13 85.3 7.6 112 16-146 48-165 (170)
12 1nkv_A Hypothetical protein YJ 98.8 7.4E-09 2.5E-13 89.8 8.6 103 15-120 67-184 (256)
13 3ujc_A Phosphoethanolamine N-m 98.8 7.6E-09 2.6E-13 89.9 8.5 101 15-120 86-203 (266)
14 3g5l_A Putative S-adenosylmeth 98.8 9.8E-09 3.3E-13 89.2 8.8 70 16-91 76-146 (253)
15 2p7i_A Hypothetical protein; p 98.8 1.4E-08 5E-13 86.8 9.7 71 15-93 72-144 (250)
16 3ocj_A Putative exported prote 98.8 6.5E-09 2.2E-13 93.5 7.6 119 16-142 152-305 (305)
17 2o57_A Putative sarcosine dime 98.8 8.9E-09 3E-13 91.7 7.9 103 16-120 114-231 (297)
18 3l8d_A Methyltransferase; stru 98.8 1.2E-08 4.2E-13 87.6 8.4 101 15-121 83-198 (242)
19 4fsd_A Arsenic methyltransfera 98.8 1.4E-08 4.9E-13 94.6 8.9 107 16-122 117-250 (383)
20 3kkz_A Uncharacterized protein 98.8 2.7E-08 9.2E-13 87.3 10.2 104 15-120 77-193 (267)
21 3f4k_A Putative methyltransfer 98.8 3.3E-08 1.1E-12 85.8 10.6 103 16-120 78-193 (257)
22 3ccf_A Cyclopropane-fatty-acyl 98.8 1.7E-08 6E-13 89.2 8.9 71 15-94 87-158 (279)
23 3bus_A REBM, methyltransferase 98.8 2.8E-08 9.6E-13 87.1 9.7 76 15-92 92-168 (273)
24 3mgg_A Methyltransferase; NYSG 98.8 2E-08 7E-13 88.2 8.6 75 15-92 69-144 (276)
25 2yqz_A Hypothetical protein TT 98.7 3.5E-08 1.2E-12 85.6 9.4 71 15-89 69-140 (263)
26 1xtp_A LMAJ004091AAA; SGPP, st 98.7 9.6E-09 3.3E-13 88.9 5.6 102 15-121 124-236 (254)
27 2aot_A HMT, histamine N-methyl 98.7 5.5E-09 1.9E-13 93.4 4.1 80 14-93 89-175 (292)
28 3e23_A Uncharacterized protein 98.7 2.8E-08 9.5E-13 83.9 8.0 119 16-144 74-205 (211)
29 3sm3_A SAM-dependent methyltra 98.7 7.3E-08 2.5E-12 81.9 10.2 78 16-93 61-144 (235)
30 3pfg_A N-methyltransferase; N, 98.7 6.9E-08 2.4E-12 84.4 9.9 67 15-90 80-151 (263)
31 3bkw_A MLL3908 protein, S-aden 98.7 1.5E-08 5.2E-13 86.9 5.5 71 15-91 74-145 (243)
32 3vc1_A Geranyl diphosphate 2-C 98.7 4.2E-08 1.4E-12 88.4 8.6 103 16-120 149-266 (312)
33 2gs9_A Hypothetical protein TT 98.7 3.8E-08 1.3E-12 83.0 7.5 72 15-94 64-136 (211)
34 2ex4_A Adrenal gland protein A 98.7 2.4E-08 8.3E-13 86.3 6.4 104 15-121 110-223 (241)
35 1y8c_A S-adenosylmethionine-de 98.7 8.1E-08 2.8E-12 82.2 9.3 72 15-91 67-143 (246)
36 1pjz_A Thiopurine S-methyltran 98.6 2.5E-08 8.6E-13 84.7 5.5 75 16-90 53-140 (203)
37 3cgg_A SAM-dependent methyltra 98.6 2.4E-07 8.3E-12 76.1 11.2 93 15-120 76-172 (195)
38 3ou2_A SAM-dependent methyltra 98.6 1.8E-07 6.2E-12 78.7 10.3 70 16-93 77-149 (218)
39 2a14_A Indolethylamine N-methy 98.6 4.1E-08 1.4E-12 86.6 6.5 82 40-121 138-236 (263)
40 3dli_A Methyltransferase; PSI- 98.6 4.5E-08 1.6E-12 84.5 6.5 95 16-121 72-182 (240)
41 1vlm_A SAM-dependent methyltra 98.6 1.3E-07 4.3E-12 80.7 9.1 96 15-120 73-185 (219)
42 4htf_A S-adenosylmethionine-de 98.6 5.1E-08 1.7E-12 86.3 6.8 76 15-92 98-175 (285)
43 3e8s_A Putative SAM dependent 98.6 1E-07 3.5E-12 80.4 7.9 97 16-122 83-208 (227)
44 2p35_A Trans-aconitate 2-methy 98.6 1.1E-07 3.7E-12 82.4 7.7 70 15-93 65-135 (259)
45 3gu3_A Methyltransferase; alph 98.5 2.1E-07 7.2E-12 82.7 9.2 72 16-92 56-128 (284)
46 3g2m_A PCZA361.24; SAM-depende 98.5 1.9E-07 6.6E-12 83.3 8.8 77 16-93 113-193 (299)
47 2i62_A Nicotinamide N-methyltr 98.5 1.6E-07 5.5E-12 81.4 8.0 84 38-121 136-237 (265)
48 2zfu_A Nucleomethylin, cerebra 98.5 1.1E-07 3.8E-12 80.4 6.8 79 37-120 98-176 (215)
49 3dp7_A SAM-dependent methyltra 98.5 5.3E-07 1.8E-11 83.3 11.6 103 17-122 212-341 (363)
50 2p8j_A S-adenosylmethionine-de 98.5 2.1E-07 7.1E-12 78.0 7.9 74 15-92 54-130 (209)
51 3lcc_A Putative methyl chlorid 98.5 1.4E-07 4.8E-12 81.0 6.7 102 16-120 97-204 (235)
52 3ege_A Putative methyltransfer 98.5 6.2E-08 2.1E-12 85.0 4.4 82 37-120 77-175 (261)
53 3bxo_A N,N-dimethyltransferase 98.5 3.4E-07 1.2E-11 78.1 8.9 68 15-91 70-142 (239)
54 2gb4_A Thiopurine S-methyltran 98.5 2.3E-07 7.9E-12 82.0 7.9 76 15-90 98-191 (252)
55 3orh_A Guanidinoacetate N-meth 98.5 1.5E-07 5.3E-12 81.8 6.5 101 15-119 91-206 (236)
56 3ofk_A Nodulation protein S; N 98.5 3.3E-07 1.1E-11 77.5 8.0 72 15-92 81-156 (216)
57 4a6d_A Hydroxyindole O-methylt 98.5 5.9E-07 2E-11 82.9 10.3 117 16-143 211-348 (353)
58 3d2l_A SAM-dependent methyltra 98.4 7E-07 2.4E-11 76.4 9.5 71 15-90 62-137 (243)
59 3g5t_A Trans-aconitate 3-methy 98.4 2.6E-07 8.7E-12 82.5 6.7 75 16-91 70-150 (299)
60 1kpg_A CFA synthase;, cyclopro 98.4 4.7E-07 1.6E-11 80.0 8.3 74 15-93 95-171 (287)
61 2xvm_A Tellurite resistance pr 98.4 4.8E-07 1.6E-11 74.9 7.5 72 16-91 63-137 (199)
62 1zx0_A Guanidinoacetate N-meth 98.4 2.4E-07 8.4E-12 79.9 5.7 100 15-118 91-205 (236)
63 3cc8_A Putative methyltransfer 98.4 7.9E-07 2.7E-11 75.0 8.7 67 16-92 63-132 (230)
64 2r3s_A Uncharacterized protein 98.4 5.5E-07 1.9E-11 81.3 8.0 101 18-121 199-321 (335)
65 2g72_A Phenylethanolamine N-me 98.4 2.5E-07 8.5E-12 82.2 5.3 84 38-121 152-254 (289)
66 2pxx_A Uncharacterized protein 98.4 4.9E-07 1.7E-11 75.6 6.7 73 16-93 74-162 (215)
67 2fk8_A Methoxy mycolic acid sy 98.4 1E-06 3.4E-11 79.2 8.6 74 15-93 121-197 (318)
68 3i53_A O-methyltransferase; CO 98.4 8.2E-07 2.8E-11 80.6 8.0 101 17-121 202-319 (332)
69 3mcz_A O-methyltransferase; ad 98.4 2E-06 6.8E-11 78.4 10.6 115 18-142 213-350 (352)
70 3hem_A Cyclopropane-fatty-acyl 98.3 1.9E-06 6.5E-11 76.9 9.6 74 15-93 103-186 (302)
71 3jwg_A HEN1, methyltransferase 98.3 1.1E-06 3.8E-11 74.4 7.6 76 16-91 62-142 (219)
72 2vdw_A Vaccinia virus capping 98.3 6.3E-07 2.2E-11 81.1 5.7 78 15-92 79-171 (302)
73 3jwh_A HEN1; methyltransferase 98.3 1.7E-06 5.7E-11 73.3 8.0 76 16-91 62-142 (217)
74 3grz_A L11 mtase, ribosomal pr 98.3 1.2E-06 4.1E-11 73.6 7.0 113 16-148 92-204 (205)
75 3gwz_A MMCR; methyltransferase 98.3 1.9E-06 6.4E-11 79.7 8.9 101 17-121 235-354 (369)
76 1ve3_A Hypothetical protein PH 98.3 1.8E-06 6.1E-11 73.0 7.9 73 16-92 69-144 (227)
77 1qzz_A RDMB, aclacinomycin-10- 98.3 3.4E-06 1.2E-10 77.4 10.1 71 17-91 215-288 (374)
78 3e05_A Precorrin-6Y C5,15-meth 98.3 4E-06 1.4E-10 70.3 9.5 92 16-120 73-164 (204)
79 1yzh_A TRNA (guanine-N(7)-)-me 98.2 5.6E-06 1.9E-10 70.2 10.3 94 16-119 74-178 (214)
80 2qe6_A Uncharacterized protein 98.2 1.7E-06 5.9E-11 77.1 7.4 73 16-93 113-199 (274)
81 1ri5_A MRNA capping enzyme; me 98.2 1.5E-06 5E-11 76.7 6.7 76 15-92 95-176 (298)
82 4e2x_A TCAB9; kijanose, tetron 98.2 1.8E-07 6.2E-12 87.5 0.7 101 15-122 137-252 (416)
83 2kw5_A SLR1183 protein; struct 98.2 3.6E-06 1.2E-10 70.2 8.6 74 15-93 59-134 (202)
84 3thr_A Glycine N-methyltransfe 98.2 7.1E-07 2.4E-11 79.0 4.1 77 16-92 88-177 (293)
85 1xdz_A Methyltransferase GIDB; 98.2 5.2E-06 1.8E-10 71.8 9.1 94 15-120 102-199 (240)
86 1x19_A CRTF-related protein; m 98.2 1.6E-05 5.4E-10 72.9 12.6 72 17-92 223-297 (359)
87 2avn_A Ubiquinone/menaquinone 98.2 2.3E-06 7.8E-11 74.8 6.5 69 15-92 84-154 (260)
88 3fpf_A Mtnas, putative unchara 98.2 1E-06 3.5E-11 80.0 4.4 69 16-92 155-224 (298)
89 4df3_A Fibrillarin-like rRNA/T 98.2 4.9E-06 1.7E-10 73.0 8.6 103 16-125 111-219 (233)
90 1dus_A MJ0882; hypothetical pr 98.2 9.6E-06 3.3E-10 66.3 9.6 74 16-93 83-160 (194)
91 3lst_A CALO1 methyltransferase 98.2 3.2E-06 1.1E-10 77.4 7.4 84 36-122 232-335 (348)
92 1tw3_A COMT, carminomycin 4-O- 98.2 6.3E-06 2.2E-10 75.3 9.3 102 17-122 216-338 (360)
93 3bgv_A MRNA CAP guanine-N7 met 98.2 3E-06 1E-10 76.1 7.0 77 16-92 66-157 (313)
94 2fca_A TRNA (guanine-N(7)-)-me 98.1 7E-06 2.4E-10 70.0 8.9 94 15-118 70-174 (213)
95 2ip2_A Probable phenazine-spec 98.1 1.2E-05 4.2E-10 72.7 10.7 71 18-92 201-274 (334)
96 3ggd_A SAM-dependent methyltra 98.1 2.1E-06 7.2E-11 73.9 5.3 73 15-93 86-166 (245)
97 3m70_A Tellurite resistance pr 98.1 6.8E-06 2.3E-10 72.5 8.6 71 16-91 151-224 (286)
98 3g07_A 7SK snRNA methylphospha 98.1 3.4E-06 1.2E-10 75.5 6.3 56 36-91 154-221 (292)
99 3evz_A Methyltransferase; NYSG 98.1 2E-05 6.7E-10 67.1 10.8 92 16-117 88-200 (230)
100 3mq2_A 16S rRNA methyltransfer 98.1 1.2E-05 4.2E-10 67.9 9.2 110 6-119 54-180 (218)
101 2ipx_A RRNA 2'-O-methyltransfe 98.1 1.4E-05 4.9E-10 68.5 9.6 106 6-122 105-216 (233)
102 3reo_A (ISO)eugenol O-methyltr 98.1 1E-05 3.4E-10 74.9 9.0 55 36-93 246-303 (368)
103 3m33_A Uncharacterized protein 98.1 5.4E-06 1.9E-10 70.9 6.6 85 15-120 78-164 (226)
104 1fbn_A MJ fibrillarin homologu 98.1 3.1E-05 1.1E-09 66.4 11.1 98 16-122 107-212 (230)
105 1af7_A Chemotaxis receptor met 98.0 1.1E-05 3.6E-10 72.4 8.3 53 37-89 195-251 (274)
106 1p91_A Ribosomal RNA large sub 98.0 7.7E-06 2.6E-10 71.4 7.2 66 15-94 117-182 (269)
107 3bkx_A SAM-dependent methyltra 98.0 3.5E-05 1.2E-09 67.2 11.4 86 6-93 71-162 (275)
108 1nt2_A Fibrillarin-like PRE-rR 98.0 2.8E-05 9.5E-10 66.4 10.2 106 5-123 83-195 (210)
109 3mti_A RRNA methylase; SAM-dep 98.0 8.4E-06 2.9E-10 67.1 6.7 75 16-93 53-138 (185)
110 3p9c_A Caffeic acid O-methyltr 98.0 3.7E-05 1.3E-09 71.0 11.0 54 36-92 244-300 (364)
111 2pwy_A TRNA (adenine-N(1)-)-me 98.0 1E-05 3.6E-10 69.8 6.7 93 16-122 130-223 (258)
112 3dxy_A TRNA (guanine-N(7)-)-me 97.9 6.5E-06 2.2E-10 70.8 4.4 75 15-92 66-152 (218)
113 3bwc_A Spermidine synthase; SA 97.9 1.4E-05 4.9E-10 72.1 6.8 103 16-121 128-238 (304)
114 3g89_A Ribosomal RNA small sub 97.9 2.1E-05 7.3E-10 69.0 7.7 96 15-121 112-210 (249)
115 3ckk_A TRNA (guanine-N(7)-)-me 97.9 3E-05 1E-09 67.4 8.5 78 15-92 78-170 (235)
116 1yb2_A Hypothetical protein TA 97.9 1.5E-05 5.3E-10 70.3 6.6 90 16-121 144-235 (275)
117 3hm2_A Precorrin-6Y C5,15-meth 97.9 4.1E-05 1.4E-09 62.0 8.5 88 16-116 58-146 (178)
118 3lpm_A Putative methyltransfer 97.9 9E-05 3.1E-09 64.7 10.7 95 16-120 81-198 (259)
119 1wzn_A SAM-dependent methyltra 97.8 2.9E-05 1E-09 66.8 7.3 72 15-91 71-146 (252)
120 3htx_A HEN1; HEN1, small RNA m 97.8 3.4E-05 1.2E-09 78.7 8.7 76 16-92 755-836 (950)
121 3giw_A Protein of unknown func 97.8 2E-05 6.9E-10 70.8 6.3 76 16-94 114-204 (277)
122 3p9n_A Possible methyltransfer 97.8 1.7E-05 5.9E-10 65.7 5.4 75 16-93 76-156 (189)
123 3sso_A Methyltransferase; macr 97.8 6.5E-06 2.2E-10 77.8 2.5 56 36-92 264-326 (419)
124 1ej0_A FTSJ; methyltransferase 97.8 3.3E-05 1.1E-09 61.8 6.3 58 36-93 62-139 (180)
125 3mb5_A SAM-dependent methyltra 97.8 4.6E-05 1.6E-09 65.9 7.6 93 16-122 127-221 (255)
126 3njr_A Precorrin-6Y methylase; 97.8 0.00013 4.4E-09 61.7 10.1 88 16-117 86-174 (204)
127 1fp2_A Isoflavone O-methyltran 97.8 3.3E-05 1.1E-09 70.6 6.7 53 37-92 232-290 (352)
128 3eey_A Putative rRNA methylase 97.8 7E-05 2.4E-09 62.1 8.1 76 16-93 56-142 (197)
129 3lbf_A Protein-L-isoaspartate 97.8 4.2E-05 1.4E-09 64.1 6.7 69 16-92 108-176 (210)
130 1l3i_A Precorrin-6Y methyltran 97.8 6.2E-05 2.1E-09 61.3 7.5 93 16-121 64-157 (192)
131 2nxc_A L11 mtase, ribosomal pr 97.7 6.5E-05 2.2E-09 65.8 7.9 92 16-121 151-242 (254)
132 1i9g_A Hypothetical protein RV 97.7 6.3E-05 2.2E-09 65.9 7.8 96 16-122 133-229 (280)
133 1fp1_D Isoliquiritigenin 2'-O- 97.7 3.7E-05 1.3E-09 70.9 6.4 54 36-92 252-308 (372)
134 3id6_C Fibrillarin-like rRNA/T 97.7 0.00029 1E-08 61.5 11.5 119 4-140 102-230 (232)
135 2b3t_A Protein methyltransfera 97.7 8.4E-05 2.9E-09 65.5 8.0 94 16-121 142-261 (276)
136 3dmg_A Probable ribosomal RNA 97.7 9.4E-05 3.2E-09 69.1 8.5 73 16-92 264-342 (381)
137 3q7e_A Protein arginine N-meth 97.7 0.00013 4.5E-09 67.0 9.2 69 19-89 100-172 (349)
138 1zg3_A Isoflavanone 4'-O-methy 97.7 8.5E-05 2.9E-09 68.0 7.6 54 36-92 236-295 (358)
139 2qm3_A Predicted methyltransfe 97.6 0.00017 6E-09 66.7 8.8 96 16-117 204-303 (373)
140 3q87_B N6 adenine specific DNA 97.6 0.00011 3.7E-09 60.2 6.6 78 36-122 61-148 (170)
141 2fyt_A Protein arginine N-meth 97.6 0.00025 8.6E-09 64.9 9.4 67 19-87 98-168 (340)
142 2plw_A Ribosomal RNA methyltra 97.6 0.00013 4.5E-09 60.5 6.7 56 37-92 64-156 (201)
143 2xyq_A Putative 2'-O-methyl tr 97.6 6.7E-05 2.3E-09 67.8 5.2 77 37-121 106-195 (290)
144 3uwp_A Histone-lysine N-methyl 97.5 2.9E-05 1E-09 73.6 2.7 56 36-92 232-290 (438)
145 1o54_A SAM-dependent O-methylt 97.5 0.00027 9.2E-09 62.2 8.4 92 16-122 146-238 (277)
146 3iv6_A Putative Zn-dependent a 97.5 0.00015 5.2E-09 64.4 6.6 68 15-92 75-150 (261)
147 2fpo_A Methylase YHHF; structu 97.5 0.00014 4.9E-09 61.2 6.1 74 16-92 86-162 (202)
148 3gjy_A Spermidine synthase; AP 97.5 0.0002 6.9E-09 65.4 7.5 74 16-92 122-202 (317)
149 2yxd_A Probable cobalt-precorr 97.5 0.00033 1.1E-08 56.5 8.1 85 16-116 66-150 (183)
150 2ift_A Putative methylase HI07 97.5 8.7E-05 3E-09 62.5 4.7 75 15-92 84-165 (201)
151 2ozv_A Hypothetical protein AT 97.5 0.0005 1.7E-08 60.3 9.8 77 16-92 69-172 (260)
152 2frn_A Hypothetical protein PH 97.5 0.00016 5.6E-09 64.1 6.2 95 16-117 157-251 (278)
153 2pjd_A Ribosomal RNA small sub 97.4 0.0002 7E-09 65.3 7.0 71 16-92 229-305 (343)
154 1vbf_A 231AA long hypothetical 97.4 0.00019 6.5E-09 60.9 6.4 68 15-92 100-167 (231)
155 4dcm_A Ribosomal RNA large sub 97.4 0.0002 6.7E-09 66.7 6.9 76 16-92 255-336 (375)
156 1g8a_A Fibrillarin-like PRE-rR 97.4 0.00067 2.3E-08 57.5 9.8 67 16-89 107-177 (227)
157 3r0q_C Probable protein argini 97.4 0.0003 1E-08 65.2 7.9 71 18-91 96-170 (376)
158 1dl5_A Protein-L-isoaspartate 97.4 0.0002 6.8E-09 64.6 6.4 69 16-92 109-177 (317)
159 1ixk_A Methyltransferase; open 97.4 0.00068 2.3E-08 61.3 9.9 82 5-93 145-249 (315)
160 3p2e_A 16S rRNA methylase; met 97.4 0.00038 1.3E-08 59.9 7.8 70 17-89 59-138 (225)
161 3tma_A Methyltransferase; thum 97.4 0.00033 1.1E-08 64.1 7.7 74 16-92 237-319 (354)
162 2yxe_A Protein-L-isoaspartate 97.4 0.00028 9.6E-09 59.2 6.7 70 15-92 110-179 (215)
163 1jsx_A Glucose-inhibited divis 97.4 0.00032 1.1E-08 58.3 6.8 69 16-92 98-167 (207)
164 1g6q_1 HnRNP arginine N-methyl 97.4 0.00063 2.1E-08 61.8 9.3 68 19-88 72-143 (328)
165 2fhp_A Methylase, putative; al 97.3 0.00011 3.9E-09 59.8 3.6 76 16-93 76-157 (187)
166 2vdv_E TRNA (guanine-N(7)-)-me 97.3 0.00085 2.9E-08 57.9 9.4 76 16-91 82-174 (246)
167 4dzr_A Protein-(glutamine-N5) 97.3 2.6E-05 8.9E-10 64.8 -0.5 94 16-121 63-190 (215)
168 1i1n_A Protein-L-isoaspartate 97.3 0.0003 1E-08 59.5 5.7 72 16-92 111-184 (226)
169 3b5i_A S-adenosyl-L-methionine 97.3 0.00041 1.4E-08 64.8 6.7 48 47-94 143-229 (374)
170 2esr_A Methyltransferase; stru 97.2 0.00012 4E-09 59.6 2.4 77 15-93 62-141 (177)
171 2yvl_A TRMI protein, hypotheti 97.2 0.00073 2.5E-08 57.7 7.4 71 16-92 122-192 (248)
172 3u81_A Catechol O-methyltransf 97.2 0.00027 9.3E-09 60.0 4.5 74 16-92 92-172 (221)
173 1r18_A Protein-L-isoaspartate( 97.2 0.00041 1.4E-08 59.0 5.3 71 16-92 123-196 (227)
174 2pbf_A Protein-L-isoaspartate 97.2 0.0003 1E-08 59.6 4.4 72 16-92 118-195 (227)
175 1jg1_A PIMT;, protein-L-isoasp 97.2 0.00065 2.2E-08 58.1 6.5 69 16-93 123-192 (235)
176 2nyu_A Putative ribosomal RNA 97.1 0.00053 1.8E-08 56.4 5.5 57 37-93 71-148 (196)
177 2efj_A 3,7-dimethylxanthine me 97.1 0.0004 1.4E-08 65.1 5.0 73 48-120 143-258 (384)
178 3adn_A Spermidine synthase; am 97.1 0.00054 1.8E-08 61.7 5.6 77 16-92 116-200 (294)
179 1uir_A Polyamine aminopropyltr 97.1 0.0004 1.4E-08 62.8 4.7 76 16-91 110-196 (314)
180 1iy9_A Spermidine synthase; ro 97.1 0.0011 3.9E-08 58.7 7.4 77 16-92 108-191 (275)
181 2y1w_A Histone-arginine methyl 97.1 0.0014 4.6E-08 60.0 8.1 69 19-90 84-155 (348)
182 3dr5_A Putative O-methyltransf 97.0 0.00047 1.6E-08 59.2 4.6 72 16-92 90-165 (221)
183 2yxl_A PH0851 protein, 450AA l 97.0 0.0045 1.5E-07 58.7 11.8 82 5-93 286-392 (450)
184 2b25_A Hypothetical protein; s 97.0 0.00095 3.2E-08 60.4 6.3 73 16-92 139-221 (336)
185 1m6e_X S-adenosyl-L-methionnin 97.0 0.0011 3.8E-08 61.5 6.6 77 45-121 130-247 (359)
186 2km1_A Protein DRE2; yeast, an 97.0 0.00039 1.3E-08 55.9 3.0 101 3-119 8-114 (136)
187 3tfw_A Putative O-methyltransf 96.9 0.00086 3E-08 58.2 5.4 72 16-92 97-172 (248)
188 3gdh_A Trimethylguanosine synt 96.9 3.9E-05 1.3E-09 65.8 -3.2 72 16-90 109-181 (241)
189 1xj5_A Spermidine synthase 1; 96.9 0.0019 6.4E-08 59.2 7.8 76 15-90 152-235 (334)
190 3ntv_A MW1564 protein; rossman 96.9 0.00088 3E-08 57.4 5.2 72 16-92 104-178 (232)
191 3r3h_A O-methyltransferase, SA 96.9 0.0017 5.8E-08 56.4 7.0 54 36-92 112-172 (242)
192 2oxt_A Nucleoside-2'-O-methylt 96.9 0.0019 6.4E-08 57.2 7.4 53 37-92 123-187 (265)
193 3c3p_A Methyltransferase; NP_9 96.9 0.0006 2.1E-08 57.1 4.0 72 16-92 90-162 (210)
194 1inl_A Spermidine synthase; be 96.9 0.0019 6.5E-08 57.9 7.4 77 16-92 123-207 (296)
195 2o07_A Spermidine synthase; st 96.9 0.0016 5.4E-08 58.8 6.7 77 16-92 128-211 (304)
196 1sqg_A SUN protein, FMU protei 96.9 0.0074 2.5E-07 56.7 11.5 82 4-93 271-377 (429)
197 2b2c_A Spermidine synthase; be 96.9 0.00069 2.4E-08 61.6 4.1 76 16-91 141-223 (314)
198 1o9g_A RRNA methyltransferase; 96.8 0.0013 4.3E-08 56.8 5.6 53 40-92 149-216 (250)
199 2wa2_A Non-structural protein 96.8 0.0022 7.6E-08 57.1 6.9 54 37-93 131-196 (276)
200 2i7c_A Spermidine synthase; tr 96.8 0.0012 4.2E-08 58.7 5.0 77 16-92 111-194 (283)
201 1ws6_A Methyltransferase; stru 96.8 0.0006 2.1E-08 54.5 2.6 73 16-93 72-150 (171)
202 3b3j_A Histone-arginine methyl 96.8 0.0011 3.7E-08 63.7 4.8 68 19-89 192-262 (480)
203 3a27_A TYW2, uncharacterized p 96.7 0.0021 7.3E-08 56.7 6.2 71 16-93 152-222 (272)
204 3fzg_A 16S rRNA methylase; met 96.7 0.00036 1.2E-08 59.6 1.1 70 16-90 82-152 (200)
205 3opn_A Putative hemolysin; str 96.7 9.3E-05 3.2E-09 64.3 -2.7 63 50-119 104-180 (232)
206 2gpy_A O-methyltransferase; st 96.7 0.0024 8.3E-08 54.3 6.3 73 16-92 87-162 (233)
207 3ajd_A Putative methyltransfer 96.7 0.0045 1.6E-07 54.5 8.2 82 5-93 110-214 (274)
208 3hp7_A Hemolysin, putative; st 96.7 0.0027 9.2E-08 57.2 6.6 67 51-119 148-228 (291)
209 2pt6_A Spermidine synthase; tr 96.7 0.0016 5.6E-08 59.1 5.0 77 16-92 149-232 (321)
210 2bm8_A Cephalosporin hydroxyla 96.6 0.0024 8.2E-08 55.2 5.8 54 36-91 130-188 (236)
211 1u2z_A Histone-lysine N-methyl 96.6 0.0024 8.1E-08 60.7 6.1 55 36-91 301-360 (433)
212 2p41_A Type II methyltransfera 96.6 0.0028 9.6E-08 57.2 5.9 56 36-93 131-194 (305)
213 3bzb_A Uncharacterized protein 96.5 0.0065 2.2E-07 53.7 8.0 103 16-120 112-234 (281)
214 1mjf_A Spermidine synthase; sp 96.4 0.0025 8.4E-08 56.6 4.4 75 16-92 107-195 (281)
215 2frx_A Hypothetical protein YE 96.4 0.014 4.9E-07 55.9 10.0 83 4-93 143-249 (479)
216 3dou_A Ribosomal RNA large sub 96.4 0.0029 1E-07 52.9 4.6 57 36-92 62-141 (191)
217 2igt_A SAM dependent methyltra 96.4 0.0025 8.4E-08 58.3 4.3 99 16-116 184-297 (332)
218 3tr6_A O-methyltransferase; ce 96.4 0.0025 8.6E-08 53.6 4.1 72 16-92 98-176 (225)
219 3cbg_A O-methyltransferase; cy 96.4 0.0025 8.6E-08 54.6 4.1 72 16-92 106-184 (232)
220 2cmg_A Spermidine synthase; tr 96.3 0.0033 1.1E-07 55.5 4.7 71 15-92 102-173 (262)
221 3duw_A OMT, O-methyltransferas 96.3 0.003 1E-07 53.2 4.2 73 16-92 92-169 (223)
222 3tm4_A TRNA (guanine N2-)-meth 96.2 0.018 6.2E-07 53.1 9.5 91 16-120 250-349 (373)
223 4hc4_A Protein arginine N-meth 96.2 0.022 7.4E-07 53.1 9.6 68 19-89 117-188 (376)
224 2h00_A Methyltransferase 10 do 96.2 0.0014 4.8E-08 56.5 1.4 72 16-89 98-191 (254)
225 1ne2_A Hypothetical protein TA 96.1 0.013 4.5E-07 48.3 7.2 61 16-89 83-146 (200)
226 4azs_A Methyltransferase WBDD; 96.1 0.0016 5.5E-08 63.6 1.5 75 15-92 96-175 (569)
227 2hnk_A SAM-dependent O-methylt 96.0 0.0055 1.9E-07 52.3 4.4 71 16-91 94-182 (239)
228 1sui_A Caffeoyl-COA O-methyltr 96.0 0.0078 2.7E-07 52.2 5.3 71 16-91 113-191 (247)
229 2avd_A Catechol-O-methyltransf 95.8 0.0094 3.2E-07 50.1 5.1 72 16-92 103-181 (229)
230 3c3y_A Pfomt, O-methyltransfer 95.8 0.0053 1.8E-07 52.8 3.4 71 16-91 104-182 (237)
231 3m6w_A RRNA methylase; rRNA me 95.7 0.019 6.5E-07 54.9 7.3 82 4-93 127-232 (464)
232 3m4x_A NOL1/NOP2/SUN family pr 95.6 0.013 4.4E-07 56.0 5.7 83 4-93 131-237 (456)
233 1nv8_A HEMK protein; class I a 95.6 0.026 8.8E-07 50.1 7.2 72 16-91 155-250 (284)
234 1wxx_A TT1595, hypothetical pr 95.6 0.023 7.8E-07 52.5 7.0 75 16-93 240-328 (382)
235 2qy6_A UPF0209 protein YFCK; s 95.5 0.0072 2.5E-07 53.3 3.4 72 36-118 150-230 (257)
236 3lec_A NADB-rossmann superfami 95.5 0.044 1.5E-06 47.6 8.1 94 16-121 54-147 (230)
237 1wy7_A Hypothetical protein PH 95.4 0.14 4.8E-06 42.0 10.8 86 16-117 81-169 (207)
238 2f8l_A Hypothetical protein LM 95.4 0.044 1.5E-06 49.6 8.3 94 16-117 168-280 (344)
239 3o4f_A Spermidine synthase; am 95.3 0.07 2.4E-06 48.0 9.2 77 16-92 116-200 (294)
240 1zq9_A Probable dimethyladenos 95.3 0.011 3.9E-07 52.4 3.9 69 15-87 58-144 (285)
241 3c0k_A UPF0064 protein YCCW; P 95.2 0.048 1.6E-06 50.4 8.0 76 16-93 252-342 (396)
242 3v97_A Ribosomal RNA large sub 95.1 0.013 4.4E-07 58.8 4.0 92 16-116 571-675 (703)
243 2as0_A Hypothetical protein PH 95.1 0.042 1.4E-06 50.8 7.2 76 16-93 249-338 (396)
244 3frh_A 16S rRNA methylase; met 95.0 0.036 1.2E-06 48.8 6.2 70 16-90 135-206 (253)
245 2b78_A Hypothetical protein SM 95.0 0.043 1.5E-06 50.8 6.8 97 16-116 244-355 (385)
246 2yx1_A Hypothetical protein MJ 94.6 0.082 2.8E-06 47.9 7.6 70 16-93 225-294 (336)
247 3gnl_A Uncharacterized protein 94.5 0.13 4.4E-06 45.0 8.4 94 16-121 54-147 (244)
248 3k6r_A Putative transferase PH 94.2 0.14 4.8E-06 45.5 8.1 76 36-116 175-250 (278)
249 3kr9_A SAM-dependent methyltra 94.1 0.17 5.8E-06 43.6 8.1 93 16-121 48-141 (225)
250 4dmg_A Putative uncharacterize 94.0 0.13 4.5E-06 47.8 7.9 74 16-93 245-329 (393)
251 3lcv_B Sisomicin-gentamicin re 93.9 0.23 7.8E-06 44.3 8.7 70 16-91 165-237 (281)
252 2zig_A TTHA0409, putative modi 93.8 0.034 1.2E-06 49.5 3.1 55 37-91 21-98 (297)
253 2ih2_A Modification methylase 93.5 0.17 5.7E-06 46.5 7.4 77 37-117 82-188 (421)
254 1uwv_A 23S rRNA (uracil-5-)-me 93.4 0.28 9.6E-06 46.0 9.0 71 15-91 316-390 (433)
255 3evf_A RNA-directed RNA polyme 93.2 0.22 7.7E-06 44.3 7.5 56 37-92 123-186 (277)
256 3vyw_A MNMC2; tRNA wobble urid 92.6 0.14 4.8E-06 46.3 5.4 72 36-118 166-243 (308)
257 3ldg_A Putative uncharacterize 92.6 0.37 1.3E-05 44.7 8.4 74 16-92 265-345 (384)
258 2okc_A Type I restriction enzy 92.5 0.2 6.9E-06 47.0 6.6 74 16-92 217-309 (445)
259 3k0b_A Predicted N6-adenine-sp 92.2 0.32 1.1E-05 45.2 7.4 74 16-92 272-352 (393)
260 2qfm_A Spermine synthase; sper 92.0 0.11 3.9E-06 48.0 4.0 78 16-93 220-317 (364)
261 2jjq_A Uncharacterized RNA met 91.3 0.48 1.7E-05 44.4 7.7 68 15-90 320-387 (425)
262 2h1r_A Dimethyladenosine trans 91.0 0.23 8E-06 44.1 5.0 48 15-67 72-119 (299)
263 3ldu_A Putative methylase; str 90.9 0.46 1.6E-05 44.0 7.0 74 16-92 266-346 (385)
264 1boo_A Protein (N-4 cytosine-s 90.3 0.3 1E-05 44.0 5.0 56 37-92 14-86 (323)
265 4gqb_A Protein arginine N-meth 87.5 1.3 4.5E-05 43.9 7.7 53 34-87 409-464 (637)
266 4fzv_A Putative methyltransfer 87.0 2.5 8.6E-05 38.8 8.9 91 2-93 171-287 (359)
267 2b9e_A NOL1/NOP2/SUN domain fa 86.7 1.7 5.7E-05 38.9 7.4 82 4-93 128-237 (309)
268 1yub_A Ermam, rRNA methyltrans 86.0 0.18 6E-06 43.2 0.5 54 36-90 75-145 (245)
269 2ar0_A M.ecoki, type I restric 84.4 0.95 3.2E-05 43.8 4.9 55 38-92 244-314 (541)
270 1qam_A ERMC' methyltransferase 83.7 1 3.4E-05 38.6 4.3 57 15-79 60-117 (244)
271 3ua3_A Protein arginine N-meth 83.4 1.1 3.9E-05 44.9 5.1 54 34-87 470-531 (745)
272 3v97_A Ribosomal RNA large sub 82.9 2.4 8.1E-05 42.3 7.2 75 16-92 265-349 (703)
273 3cvo_A Methyltransferase-like 82.5 4.3 0.00015 34.2 7.7 69 16-90 60-154 (202)
274 2vz8_A Fatty acid synthase; tr 81.7 0.61 2.1E-05 53.1 2.6 42 50-91 1307-1349(2512)
275 1g60_A Adenine-specific methyl 81.4 1.3 4.5E-05 38.2 4.2 60 50-117 19-93 (260)
276 2dul_A N(2),N(2)-dimethylguano 80.4 1.4 5E-05 40.5 4.3 50 38-90 114-164 (378)
277 3axs_A Probable N(2),N(2)-dime 80.0 2.4 8.2E-05 39.4 5.7 50 38-90 107-158 (392)
278 3bt7_A TRNA (uracil-5-)-methyl 79.6 2.3 8E-05 38.6 5.4 69 16-92 244-328 (369)
279 1eg2_A Modification methylase 77.5 2 6.8E-05 38.6 4.2 54 38-91 39-107 (319)
280 3gru_A Dimethyladenosine trans 76.9 2.8 9.7E-05 37.2 5.0 46 16-66 81-126 (295)
281 3khk_A Type I restriction-modi 72.0 5 0.00017 38.8 5.7 76 41-117 315-421 (544)
282 3gcz_A Polyprotein; flavivirus 69.6 6.4 0.00022 35.0 5.4 56 37-92 139-203 (282)
283 3rht_A (gatase1)-like protein; 68.3 18 0.0006 31.6 7.9 77 3-91 5-87 (259)
284 2wk1_A NOVP; transferase, O-me 68.2 5.3 0.00018 35.3 4.6 56 36-92 189-246 (282)
285 4auk_A Ribosomal RNA large sub 67.9 22 0.00075 32.8 8.8 82 36-117 252-334 (375)
286 2px2_A Genome polyprotein [con 67.1 22 0.00077 31.2 8.3 52 39-92 125-185 (269)
287 2hwk_A Helicase NSP2; rossman 66.2 8.3 0.00028 34.6 5.3 40 53-92 205-256 (320)
288 3ps9_A TRNA 5-methylaminomethy 65.2 5.2 0.00018 39.2 4.3 70 37-117 157-235 (676)
289 3c6k_A Spermine synthase; sper 62.3 5.1 0.00018 37.1 3.4 77 16-92 237-333 (381)
290 3eld_A Methyltransferase; flav 58.3 16 0.00055 32.7 5.8 54 38-92 131-193 (300)
291 3lkd_A Type I restriction-modi 58.0 26 0.00088 33.7 7.7 79 37-117 277-383 (542)
292 3pvc_A TRNA 5-methylaminomethy 57.3 9.5 0.00032 37.5 4.6 71 36-117 148-227 (689)
293 3r24_A NSP16, 2'-O-methyl tran 56.6 14 0.00048 33.4 5.1 54 39-93 155-220 (344)
294 3fut_A Dimethyladenosine trans 48.5 16 0.00056 31.8 4.2 45 16-66 77-122 (271)
295 3tos_A CALS11; methyltransfera 48.5 13 0.00045 32.3 3.6 56 36-92 158-219 (257)
296 1wg8_A Predicted S-adenosylmet 44.7 11 0.00038 33.5 2.5 23 70-92 213-235 (285)
297 2k4x_A 30S ribosomal protein S 44.7 9.4 0.00032 25.3 1.6 19 238-259 34-52 (55)
298 3trk_A Nonstructural polyprote 44.4 25 0.00085 31.3 4.6 44 49-92 206-261 (324)
299 3tka_A Ribosomal RNA small sub 41.9 13 0.00044 34.0 2.5 23 70-92 254-276 (347)
300 3tqs_A Ribosomal RNA small sub 41.7 20 0.00067 30.8 3.6 43 15-63 59-105 (255)
301 3ny7_A YCHM protein, sulfate t 40.5 55 0.0019 24.1 5.6 51 57-118 49-101 (118)
302 4e5v_A Putative THUA-like prot 36.5 1.7E+02 0.006 25.3 9.0 86 3-92 5-95 (281)
303 4gua_A Non-structural polyprot 35.9 29 0.001 34.0 4.0 41 52-92 219-271 (670)
304 1m6y_A S-adenosyl-methyltransf 35.2 16 0.00054 32.4 2.0 23 70-92 225-247 (301)
305 2r6z_A UPF0341 protein in RSP 32.9 4.4 0.00015 35.1 -2.1 63 18-82 123-189 (258)
306 2l55_A SILB,silver efflux prot 32.1 26 0.00088 25.0 2.3 14 251-264 45-58 (82)
307 1qyr_A KSGA, high level kasuga 30.4 26 0.00088 30.0 2.5 45 15-64 51-100 (252)
308 1twf_L ABC10-alpha, DNA-direct 29.1 63 0.0022 22.3 3.8 35 228-262 27-67 (70)
309 3s1s_A Restriction endonucleas 29.0 59 0.002 33.2 5.1 22 71-92 446-467 (878)
310 3u28_C H/ACA ribonucleoprotein 28.8 23 0.00079 27.1 1.6 21 247-267 84-106 (114)
311 2oyr_A UPF0341 protein YHIQ; a 28.5 17 0.00059 31.4 1.0 48 37-84 146-194 (258)
312 1pqw_A Polyketide synthase; ro 27.8 40 0.0014 26.8 3.1 32 53-90 106-137 (198)
313 1wc2_A Endoglucanase; hydrolas 26.3 22 0.00075 29.4 1.2 32 230-267 67-102 (181)
314 4fib_A Uncharacterized protein 25.8 36 0.0012 26.5 2.2 17 250-266 61-77 (129)
315 3eqz_A Response regulator; str 25.6 1.8E+02 0.006 20.4 6.4 37 55-92 47-83 (135)
316 1gl0_I Protease inhibitor LCMI 24.6 19 0.00064 21.7 0.4 18 190-207 2-20 (35)
317 3dmg_A Probable ribosomal RNA 24.2 59 0.002 29.5 3.9 42 51-92 98-141 (381)
318 1m6y_A S-adenosyl-methyltransf 22.6 41 0.0014 29.7 2.3 43 16-62 59-106 (301)
319 2jw6_A Deformed epidermal auto 22.4 41 0.0014 21.2 1.7 20 228-247 8-27 (52)
320 2uyo_A Hypothetical protein ML 22.2 3.9E+02 0.013 23.3 8.8 57 36-93 153-221 (310)
321 2e6z_A Transcription elongatio 21.9 58 0.002 21.5 2.5 17 251-267 5-21 (59)
322 1rjd_A PPM1P, carboxy methyl t 21.5 1.4E+02 0.0048 26.5 5.7 56 36-92 167-234 (334)
323 3gj3_B Nuclear pore complex pr 20.7 47 0.0016 19.6 1.6 18 229-246 7-27 (33)
324 2od1_A Protein CBFA2T1; zinc f 20.5 57 0.0019 21.4 2.2 20 228-247 12-31 (60)
325 2xtt_A Protease inhibitor SGPI 20.3 21 0.00073 21.6 -0.0 17 191-207 3-20 (36)
326 3g2e_A OORC subunit of 2-oxogl 20.2 1.6E+02 0.0054 23.9 5.4 32 53-91 69-100 (194)
No 1
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.63 E-value=1.1e-15 Score=126.98 Aligned_cols=140 Identities=21% Similarity=0.352 Sum_probs=102.0
Q ss_pred ccEEEEecCCcc--cHHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCC---CCCceeEEEeccccccC-Ch-HHHHHH
Q 024162 3 SAVLALSEDKIL--PVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPV---ESFSIDTVLSISSSHEL-PG-DQLLEE 75 (271)
Q Consensus 3 ~~vl~~td~~~~--~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~---~~~sfD~V~s~~~l~~~-~~-~~~L~e 75 (271)
..||.++.+... .++.|++.++++.. .++.+++++++++++ ++++||+|++..++||+ .+ ..+|++
T Consensus 14 ~~vL~~~~g~v~vD~s~~ml~~a~~~~~-------~~~~~~~~d~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~l~~ 86 (176)
T 2ld4_A 14 QFVAVVWDKSSPVEALKGLVDKLQALTG-------NEGRVSVENIKQLLQSAHKESSFDIILSGLVPGSTTLHSAEILAE 86 (176)
T ss_dssp SEEEEEECTTSCHHHHHHHHHHHHHHTT-------TTSEEEEEEGGGGGGGCCCSSCEEEEEECCSTTCCCCCCHHHHHH
T ss_pred CEEEEecCCceeeeCCHHHHHHHHHhcc-------cCcEEEEechhcCccccCCCCCEeEEEECChhhhcccCHHHHHHH
Confidence 468888888744 48899999998852 137899999999988 89999999999999998 66 999999
Q ss_pred HHHhccCCcEEEEEecCCCCcc--cHHHHHHHHHHHHHHcCCcchhhhhhcccc--------------CcceeEEEEEee
Q 024162 76 ISRVLKPGGTILIYKKLTSDKG--DVDKAISALEGKLLLAGFLDAQRIQLKSVV--------------PAEVVSFGVKGK 139 (271)
Q Consensus 76 i~RvLKPGG~l~i~~~~~~~~~--e~~~~~~~l~~~l~laGF~~v~~~~~~~~~--------------~~~~~~~~i~a~ 139 (271)
++|+|||||+|++..+...... ......+.+...+..+||+.+......++. .+.+..+.+.++
T Consensus 87 ~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGfi~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~a~ 166 (176)
T 2ld4_A 87 IARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGLVEVKELQREPLTPEEVQSVREHLGHESDNLLFVQITGK 166 (176)
T ss_dssp HHHHEEEEEEEEEEEEEESSSCSSSSSCCHHHHHHHHHHTTCEEEEEEEEECCCHHHHHHHHHHTCCCCSSEEEEEEEEE
T ss_pred HHHHCCCCEEEEEEcccccccccccccCCHHHHHHHHHHCCCcEeecCcccCCCHHHHHHHHHHhcccCCceEEEEEecc
Confidence 9999999999999764321100 000112467788999999443222111111 122347789999
Q ss_pred CCCccccccc
Q 024162 140 KPTWKIGSSF 149 (271)
Q Consensus 140 KPs~~~gss~ 149 (271)
||+|++|||+
T Consensus 167 Kp~~~~gs~~ 176 (176)
T 2ld4_A 167 KPNFEVGSSR 176 (176)
T ss_dssp CCCSSCCSCC
T ss_pred CCcccccCCC
Confidence 9999999984
No 2
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.14 E-value=2.3e-10 Score=101.93 Aligned_cols=75 Identities=19% Similarity=0.297 Sum_probs=62.0
Q ss_pred cHHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCCh---HHHHHHHHHhccCCcEEEEEec
Q 024162 15 PVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPG---DQLLEEISRVLKPGGTILIYKK 91 (271)
Q Consensus 15 ~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~---~~~L~ei~RvLKPGG~l~i~~~ 91 (271)
.++.|++.||++.... ....+|.++++|+.++|++ .||+|++.+++|++++ ..+|++++|+|||||+|++.+.
T Consensus 104 ~s~~ml~~A~~~~~~~--~~~~~v~~~~~D~~~~~~~--~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~ 179 (261)
T 4gek_A 104 NSPAMIERCRRHIDAY--KAPTPVDVIEGDIRDIAIE--NASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEK 179 (261)
T ss_dssp SCHHHHHHHHHHHHTS--CCSSCEEEEESCTTTCCCC--SEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHhh--ccCceEEEeeccccccccc--ccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEec
Confidence 3789999999884221 2235799999999998875 5999999999999975 4689999999999999999986
Q ss_pred CC
Q 024162 92 LT 93 (271)
Q Consensus 92 ~~ 93 (271)
..
T Consensus 180 ~~ 181 (261)
T 4gek_A 180 FS 181 (261)
T ss_dssp BC
T ss_pred cC
Confidence 53
No 3
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.03 E-value=7.7e-10 Score=93.90 Aligned_cols=119 Identities=18% Similarity=0.146 Sum_probs=87.0
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCCh-HHHHHHHHHhccCCcEEEEEecCCC
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPG-DQLLEEISRVLKPGGTILIYKKLTS 94 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~-~~~L~ei~RvLKPGG~l~i~~~~~~ 94 (271)
++.|++.++++... ....++.+..+++..+++++++||+|++..+++++.+ ..++++++|+|||||++++.++...
T Consensus 71 s~~~~~~a~~~~~~---~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 147 (219)
T 3dh0_A 71 QEEMVNYAWEKVNK---LGLKNVEVLKSEENKIPLPDNTVDFIFMAFTFHELSEPLKFLEELKRVAKPFAYLAIIDWKKE 147 (219)
T ss_dssp CHHHHHHHHHHHHH---HTCTTEEEEECBTTBCSSCSSCEEEEEEESCGGGCSSHHHHHHHHHHHEEEEEEEEEEEECSS
T ss_pred CHHHHHHHHHHHHH---cCCCcEEEEecccccCCCCCCCeeEEEeehhhhhcCCHHHHHHHHHHHhCCCeEEEEEEeccc
Confidence 67788888877422 1123689999999999999999999999999999987 8999999999999999999987643
Q ss_pred Cc---c--cHHHHHHHHHHHHHHcCCcchhhhhhccccCcceeEEEEEeeCCCc
Q 024162 95 DK---G--DVDKAISALEGKLLLAGFLDAQRIQLKSVVPAEVVSFGVKGKKPTW 143 (271)
Q Consensus 95 ~~---~--e~~~~~~~l~~~l~laGF~~v~~~~~~~~~~~~~~~~~i~a~KPs~ 143 (271)
.. . ...-..+.+...+..+||..++.....+ ..+.+.++||.-
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~------~~~~~~~~k~~~ 195 (219)
T 3dh0_A 148 ERDKGPPPEEVYSEWEVGLILEDAGIRVGRVVEVGK------YCFGVYAMIVKQ 195 (219)
T ss_dssp CCSSSCCGGGSCCHHHHHHHHHHTTCEEEEEEEETT------TEEEEEEECC--
T ss_pred ccccCCchhcccCHHHHHHHHHHCCCEEEEEEeeCC------ceEEEEEEeccc
Confidence 11 0 0001124677788999999876654322 355677777643
No 4
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.00 E-value=1.2e-09 Score=95.47 Aligned_cols=75 Identities=21% Similarity=0.331 Sum_probs=62.9
Q ss_pred cHHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCCh-HHHHHHHHHhccCCcEEEEEecC
Q 024162 15 PVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPG-DQLLEEISRVLKPGGTILIYKKL 92 (271)
Q Consensus 15 ~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~-~~~L~ei~RvLKPGG~l~i~~~~ 92 (271)
.++.|++.++++... ....++.+++++++++|+++++||+|++..++||+++ ..+|++++|+|||||+|++.++.
T Consensus 67 ~s~~~l~~a~~~~~~---~~~~~v~~~~~d~~~l~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~~~ 142 (260)
T 1vl5_A 67 LTEDILKVARAFIEG---NGHQQVEYVQGDAEQMPFTDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDNS 142 (260)
T ss_dssp SCHHHHHHHHHHHHH---TTCCSEEEEECCC-CCCSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHh---cCCCceEEEEecHHhCCCCCCCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEEcC
Confidence 367888888887421 1224689999999999999999999999999999987 89999999999999999998754
No 5
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=98.98 E-value=3.1e-09 Score=91.20 Aligned_cols=117 Identities=18% Similarity=0.135 Sum_probs=83.3
Q ss_pred cHHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCChH---HHHHHHHHhccCCcEEEEEec
Q 024162 15 PVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPGD---QLLEEISRVLKPGGTILIYKK 91 (271)
Q Consensus 15 ~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~~---~~L~ei~RvLKPGG~l~i~~~ 91 (271)
.++.|++.++++.... .++.++++++..++++ ++||+|++..+++++++. .++++++|+|||||+|++.++
T Consensus 76 ~s~~~~~~a~~~~~~~-----~~~~~~~~d~~~~~~~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 149 (234)
T 3dtn_A 76 MSEKMLEIAKNRFRGN-----LKVKYIEADYSKYDFE-EKYDMVVSALSIHHLEDEDKKELYKRSYSILKESGIFINADL 149 (234)
T ss_dssp SCHHHHHHHHHHTCSC-----TTEEEEESCTTTCCCC-SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCHHHHHHHHHhhccC-----CCEEEEeCchhccCCC-CCceEEEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 3678999999885221 3789999999999988 899999999999999863 599999999999999999986
Q ss_pred CCCCcccHH----HH-----------------------------HHHHHHHHHHcCCcchhhhhhccccCcceeEEEEEe
Q 024162 92 LTSDKGDVD----KA-----------------------------ISALEGKLLLAGFLDAQRIQLKSVVPAEVVSFGVKG 138 (271)
Q Consensus 92 ~~~~~~e~~----~~-----------------------------~~~l~~~l~laGF~~v~~~~~~~~~~~~~~~~~i~a 138 (271)
......... .. .+.+...|..+||..++.... ......+.+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF~~v~~~~~------~~~~~~~~~ 223 (234)
T 3dtn_A 150 VHGETAFIENLNKTIWRQYVENSGLTEEEIAAGYERSKLDKDIEMNQQLNWLKEAGFRDVSCIYK------YYQFAVMFG 223 (234)
T ss_dssp CBCSSHHHHHHHHHHHHHHHHTSSCCHHHHHTTC----CCCCCBHHHHHHHHHHTTCEEEEEEEE------ETTEEEEEE
T ss_pred cCCCChhhhhHHHHHHHHHHHhcCCCHHHHHHHHHhcccccccCHHHHHHHHHHcCCCceeeeee------ecceeEEEE
Confidence 543211100 01 124445788899988876532 122345667
Q ss_pred eCCCc
Q 024162 139 KKPTW 143 (271)
Q Consensus 139 ~KPs~ 143 (271)
.||.|
T Consensus 224 ~~~~~ 228 (234)
T 3dtn_A 224 RKTEG 228 (234)
T ss_dssp ECC--
T ss_pred Eeccc
Confidence 77765
No 6
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=98.97 E-value=3.4e-09 Score=89.15 Aligned_cols=105 Identities=18% Similarity=0.194 Sum_probs=78.5
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCCh-HHHHHHHHHhccCCcEEEEEecCCC
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPG-DQLLEEISRVLKPGGTILIYKKLTS 94 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~-~~~L~ei~RvLKPGG~l~i~~~~~~ 94 (271)
++.|++.++++.... ....++.++++++.++++++++||+|++..+++|+.+ ..++++++|+|||||++++.+....
T Consensus 75 s~~~~~~a~~~~~~~--~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 152 (219)
T 3dlc_A 75 SKHMNEIALKNIADA--NLNDRIQIVQGDVHNIPIEDNYADLIVSRGSVFFWEDVATAFREIYRILKSGGKTYIGGGFGN 152 (219)
T ss_dssp CHHHHHHHHHHHHHT--TCTTTEEEEECBTTBCSSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEECCSS
T ss_pred CHHHHHHHHHHHHhc--cccCceEEEEcCHHHCCCCcccccEEEECchHhhccCHHHHHHHHHHhCCCCCEEEEEeccCc
Confidence 677888888774211 1224689999999999999999999999999999977 8999999999999999999875432
Q ss_pred Cc--c-----------cH---------HHHHHHHHHHHHHcCCcchhhhh
Q 024162 95 DK--G-----------DV---------DKAISALEGKLLLAGFLDAQRIQ 122 (271)
Q Consensus 95 ~~--~-----------e~---------~~~~~~l~~~l~laGF~~v~~~~ 122 (271)
.. . .+ ....+.+...+..+||..++...
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~ 202 (219)
T 3dlc_A 153 KELRDSISAEMIRKNPDWKEFNRKNISQENVERFQNVLDEIGISSYEIIL 202 (219)
T ss_dssp HHHHHHHHHHHHHHCTTHHHHHHHHSSHHHHHHHHHHHHHHTCSSEEEEE
T ss_pred HHHHHHHHHHHHHhHHHHHhhhhhccccCCHHHHHHHHHHcCCCeEEEEe
Confidence 10 0 00 00124566778899998876553
No 7
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=98.96 E-value=4.9e-10 Score=99.63 Aligned_cols=70 Identities=17% Similarity=0.242 Sum_probs=61.2
Q ss_pred cHHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCChHHHHHHHHHhccCCcEEEEEecCC
Q 024162 15 PVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYKKLT 93 (271)
Q Consensus 15 ~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~~~~L~ei~RvLKPGG~l~i~~~~~ 93 (271)
+++.|++.++++ .++.+++++++++|+++++||+|++..++||++.+.+++|++|+|||||+|++..+..
T Consensus 69 ~s~~ml~~a~~~---------~~v~~~~~~~e~~~~~~~sfD~v~~~~~~h~~~~~~~~~e~~rvLkpgG~l~~~~~~~ 138 (257)
T 4hg2_A 69 PGEAQIRQALRH---------PRVTYAVAPAEDTGLPPASVDVAIAAQAMHWFDLDRFWAELRRVARPGAVFAAVTYGL 138 (257)
T ss_dssp SCHHHHHTCCCC---------TTEEEEECCTTCCCCCSSCEEEEEECSCCTTCCHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred CcHHhhhhhhhc---------CCceeehhhhhhhcccCCcccEEEEeeehhHhhHHHHHHHHHHHcCCCCEEEEEECCC
Confidence 467787665432 5689999999999999999999999999999988999999999999999999988764
No 8
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.87 E-value=2.6e-09 Score=89.71 Aligned_cols=100 Identities=15% Similarity=0.166 Sum_probs=78.8
Q ss_pred cHHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCC--h-HHHHHHHHHhccCCcEEEEEec
Q 024162 15 PVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELP--G-DQLLEEISRVLKPGGTILIYKK 91 (271)
Q Consensus 15 ~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~--~-~~~L~ei~RvLKPGG~l~i~~~ 91 (271)
.++.|++.++++. .++.++++++.++++++++||+|++..+++|++ + ..+|++++|+|||||+|++..+
T Consensus 71 ~s~~~~~~a~~~~--------~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 142 (203)
T 3h2b_A 71 PATRLVELARQTH--------PSVTFHHGTITDLSDSPKRWAGLLAWYSLIHMGPGELPDALVALRMAVEDGGGLLMSFF 142 (203)
T ss_dssp CCHHHHHHHHHHC--------TTSEEECCCGGGGGGSCCCEEEEEEESSSTTCCTTTHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CCHHHHHHHHHhC--------CCCeEEeCcccccccCCCCeEEEEehhhHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEc
Confidence 3678899988875 467899999999999999999999999999986 4 8999999999999999999987
Q ss_pred CCCCcccH--------HHHHHHHHHHHHHcCCcchhhhh
Q 024162 92 LTSDKGDV--------DKAISALEGKLLLAGFLDAQRIQ 122 (271)
Q Consensus 92 ~~~~~~e~--------~~~~~~l~~~l~laGF~~v~~~~ 122 (271)
.......+ .-....+...+..+||..++...
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 181 (203)
T 3h2b_A 143 SGPSLEPMYHPVATAYRWPLPELAQALETAGFQVTSSHW 181 (203)
T ss_dssp CCSSCEEECCSSSCEEECCHHHHHHHHHHTTEEEEEEEE
T ss_pred cCCchhhhhchhhhhccCCHHHHHHHHHHCCCcEEEEEe
Confidence 64321000 00124677788999999876543
No 9
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=98.86 E-value=1.4e-08 Score=86.03 Aligned_cols=70 Identities=20% Similarity=0.322 Sum_probs=60.9
Q ss_pred cHHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCCh-HH--HHHHHHHhccCCcEEEEEec
Q 024162 15 PVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPG-DQ--LLEEISRVLKPGGTILIYKK 91 (271)
Q Consensus 15 ~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~-~~--~L~ei~RvLKPGG~l~i~~~ 91 (271)
.++.|++.++++.. .++.++++++.+++++ ++||+|++..+++++++ .. +|++++|+|||||++++.++
T Consensus 75 ~s~~~~~~a~~~~~-------~~~~~~~~d~~~~~~~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 146 (220)
T 3hnr_A 75 PSREMRMIAKEKLP-------KEFSITEGDFLSFEVP-TSIDTIVSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFADT 146 (220)
T ss_dssp SCHHHHHHHHHHSC-------TTCCEESCCSSSCCCC-SCCSEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred CCHHHHHHHHHhCC-------CceEEEeCChhhcCCC-CCeEEEEECcchhcCChHHHHHHHHHHHHhcCCCCEEEEEec
Confidence 36788888888762 3678899999999988 99999999999999987 44 99999999999999999986
Q ss_pred C
Q 024162 92 L 92 (271)
Q Consensus 92 ~ 92 (271)
.
T Consensus 147 ~ 147 (220)
T 3hnr_A 147 I 147 (220)
T ss_dssp C
T ss_pred c
Confidence 5
No 10
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=98.85 E-value=1e-08 Score=88.74 Aligned_cols=76 Identities=18% Similarity=0.323 Sum_probs=63.5
Q ss_pred cHHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCCh-HHHHHHHHHhccCCcEEEEEecCC
Q 024162 15 PVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPG-DQLLEEISRVLKPGGTILIYKKLT 93 (271)
Q Consensus 15 ~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~-~~~L~ei~RvLKPGG~l~i~~~~~ 93 (271)
.++.|++.++++... ....++.+++++++.+|+++++||+|++..+++|+.+ ..++++++|+|||||+|++.+...
T Consensus 51 ~s~~~~~~a~~~~~~---~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 127 (239)
T 1xxl_A 51 ATKEMVEVASSFAQE---KGVENVRFQQGTAESLPFPDDSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDHYA 127 (239)
T ss_dssp SCHHHHHHHHHHHHH---HTCCSEEEEECBTTBCCSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECB
T ss_pred CCHHHHHHHHHHHHH---cCCCCeEEEecccccCCCCCCcEEEEEECCchhhccCHHHHHHHHHHHcCCCcEEEEEEcCC
Confidence 367788888876421 1124689999999999999999999999999999987 899999999999999999987653
No 11
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=98.85 E-value=5.3e-09 Score=85.31 Aligned_cols=112 Identities=19% Similarity=0.264 Sum_probs=78.9
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCCh-HHHHHHHHHhccCCcEEEEEecCCC
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPG-DQLLEEISRVLKPGGTILIYKKLTS 94 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~-~~~L~ei~RvLKPGG~l~i~~~~~~ 94 (271)
++.|++.++++. .++.+..++ +++++++||+|++..+++++.+ ..++++++|+|||||++++.++...
T Consensus 48 s~~~~~~a~~~~--------~~v~~~~~d---~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 116 (170)
T 3i9f_A 48 NVIALKEVKEKF--------DSVITLSDP---KEIPDNSVDFILFANSFHDMDDKQHVISEVKRILKDDGRVIIIDWRKE 116 (170)
T ss_dssp CHHHHHHHHHHC--------TTSEEESSG---GGSCTTCEEEEEEESCSTTCSCHHHHHHHHHHHEEEEEEEEEEEECSS
T ss_pred CHHHHHHHHHhC--------CCcEEEeCC---CCCCCCceEEEEEccchhcccCHHHHHHHHHHhcCCCCEEEEEEcCcc
Confidence 577888888773 467888887 7888999999999999999977 8999999999999999999987643
Q ss_pred Cc-----ccHHHHHHHHHHHHHHcCCcchhhhhhccccCcceeEEEEEeeCCCcccc
Q 024162 95 DK-----GDVDKAISALEGKLLLAGFLDAQRIQLKSVVPAEVVSFGVKGKKPTWKIG 146 (271)
Q Consensus 95 ~~-----~e~~~~~~~l~~~l~laGF~~v~~~~~~~~~~~~~~~~~i~a~KPs~~~g 146 (271)
.. ....-..+.+...+. ||..++.....+ ..+.+.++++.-..+
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~l~--Gf~~~~~~~~~~------~~~~l~~~~~~~~~~ 165 (170)
T 3i9f_A 117 NTGIGPPLSIRMDEKDYMGWFS--NFVVEKRFNPTP------YHFGLVLKRKTSEGH 165 (170)
T ss_dssp CCSSSSCGGGCCCHHHHHHHTT--TEEEEEEECSST------TEEEEEEEECCCCSC
T ss_pred ccccCchHhhhcCHHHHHHHHh--CcEEEEccCCCC------ceEEEEEecCCCCcc
Confidence 11 000001234555555 999877655422 244555555444333
No 12
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=98.84 E-value=7.4e-09 Score=89.85 Aligned_cols=103 Identities=15% Similarity=0.158 Sum_probs=75.2
Q ss_pred cHHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCCh-HHHHHHHHHhccCCcEEEEEecCC
Q 024162 15 PVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPG-DQLLEEISRVLKPGGTILIYKKLT 93 (271)
Q Consensus 15 ~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~-~~~L~ei~RvLKPGG~l~i~~~~~ 93 (271)
.++.|++.++++.... ....++.+++++++++++ +++||+|++..+++++++ ..+|++++|+|||||+|++.+...
T Consensus 67 ~s~~~l~~a~~~~~~~--~~~~~v~~~~~d~~~~~~-~~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~ 143 (256)
T 1nkv_A 67 MSSLFTAQAKRRAEEL--GVSERVHFIHNDAAGYVA-NEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGEPYW 143 (256)
T ss_dssp SCHHHHHHHHHHHHHT--TCTTTEEEEESCCTTCCC-SSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHhc--CCCcceEEEECChHhCCc-CCCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEecCcc
Confidence 3678888888774211 112368999999999988 889999999999999977 999999999999999999987532
Q ss_pred CCc---ccHHH-----------HHHHHHHHHHHcCCcchhh
Q 024162 94 SDK---GDVDK-----------AISALEGKLLLAGFLDAQR 120 (271)
Q Consensus 94 ~~~---~e~~~-----------~~~~l~~~l~laGF~~v~~ 120 (271)
... ..+.. ....+...+..+||..++.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 184 (256)
T 1nkv_A 144 RQLPATEEIAQACGVSSTSDFLTLPGLVGAFDDLGYDVVEM 184 (256)
T ss_dssp TTCCSSHHHHHTTTCSCGGGSCCHHHHHHHHHTTTBCCCEE
T ss_pred cCCCChHHHHHHHhcccccccCCHHHHHHHHHHCCCeeEEE
Confidence 110 00110 1235667788899987643
No 13
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=98.83 E-value=7.6e-09 Score=89.86 Aligned_cols=101 Identities=19% Similarity=0.265 Sum_probs=77.2
Q ss_pred cHHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccC--Ch-HHHHHHHHHhccCCcEEEEEec
Q 024162 15 PVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHEL--PG-DQLLEEISRVLKPGGTILIYKK 91 (271)
Q Consensus 15 ~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~--~~-~~~L~ei~RvLKPGG~l~i~~~ 91 (271)
.++.|++.++++.... .++.++++++..+|+++++||+|++..+++|+ .+ ..++++++|+|||||+|++.++
T Consensus 86 ~s~~~~~~a~~~~~~~-----~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 160 (266)
T 3ujc_A 86 ICSNIVNMANERVSGN-----NKIIFEANDILTKEFPENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDY 160 (266)
T ss_dssp SCHHHHHHHHHTCCSC-----TTEEEEECCTTTCCCCTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHhhcC-----CCeEEEECccccCCCCCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 3678999999885321 57899999999999999999999999999999 45 8899999999999999999986
Q ss_pred CCCCcc----cHHH----------HHHHHHHHHHHcCCcchhh
Q 024162 92 LTSDKG----DVDK----------AISALEGKLLLAGFLDAQR 120 (271)
Q Consensus 92 ~~~~~~----e~~~----------~~~~l~~~l~laGF~~v~~ 120 (271)
...... .... ....+...+..+||..++.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 203 (266)
T 3ujc_A 161 CATEKENWDDEFKEYVKQRKYTLITVEEYADILTACNFKNVVS 203 (266)
T ss_dssp EESCGGGCCHHHHHHHHHHTCCCCCHHHHHHHHHHTTCEEEEE
T ss_pred ccCCcccchHHHHHHHhcCCCCCCCHHHHHHHHHHcCCeEEEE
Confidence 432210 1111 1235566778888876543
No 14
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=98.82 E-value=9.8e-09 Score=89.19 Aligned_cols=70 Identities=16% Similarity=0.290 Sum_probs=62.5
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCCh-HHHHHHHHHhccCCcEEEEEec
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPG-DQLLEEISRVLKPGGTILIYKK 91 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~-~~~L~ei~RvLKPGG~l~i~~~ 91 (271)
++.|++.++++.. ..++.++++++..+++++++||+|++..+++++.+ ..+|++++|+|||||+|++...
T Consensus 76 s~~~~~~a~~~~~------~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 146 (253)
T 3g5l_A 76 SERMLTEAKRKTT------SPVVCYEQKAIEDIAIEPDAYNVVLSSLALHYIASFDDICKKVYINLKSSGSFIFSVE 146 (253)
T ss_dssp CHHHHHHHHHHCC------CTTEEEEECCGGGCCCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CHHHHHHHHHhhc------cCCeEEEEcchhhCCCCCCCeEEEEEchhhhhhhhHHHHHHHHHHHcCCCcEEEEEeC
Confidence 6789999998863 25789999999999999999999999999999977 9999999999999999999854
No 15
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=98.82 E-value=1.4e-08 Score=86.81 Aligned_cols=71 Identities=13% Similarity=0.108 Sum_probs=61.8
Q ss_pred cHHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCCh-HHHHHHHH-HhccCCcEEEEEecC
Q 024162 15 PVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPG-DQLLEEIS-RVLKPGGTILIYKKL 92 (271)
Q Consensus 15 ~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~-~~~L~ei~-RvLKPGG~l~i~~~~ 92 (271)
.++.|++.++++.. .++.+++++++++ +++++||+|++..+++|+++ ..+|++++ |+|||||+|++.++.
T Consensus 72 ~s~~~~~~a~~~~~-------~~v~~~~~d~~~~-~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~~LkpgG~l~i~~~~ 143 (250)
T 2p7i_A 72 ASEEAISHAQGRLK-------DGITYIHSRFEDA-QLPRRYDNIVLTHVLEHIDDPVALLKRINDDWLAEGGRLFLVCPN 143 (250)
T ss_dssp SCHHHHHHHHHHSC-------SCEEEEESCGGGC-CCSSCEEEEEEESCGGGCSSHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred CCHHHHHHHHHhhh-------CCeEEEEccHHHc-CcCCcccEEEEhhHHHhhcCHHHHHHHHHHHhcCCCCEEEEEcCC
Confidence 46789999998852 1689999999888 57889999999999999987 89999999 999999999999865
Q ss_pred C
Q 024162 93 T 93 (271)
Q Consensus 93 ~ 93 (271)
.
T Consensus 144 ~ 144 (250)
T 2p7i_A 144 A 144 (250)
T ss_dssp T
T ss_pred h
Confidence 4
No 16
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=98.81 E-value=6.5e-09 Score=93.51 Aligned_cols=119 Identities=19% Similarity=0.189 Sum_probs=83.7
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCCh-H---HHHHHHHHhccCCcEEEEEec
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPG-D---QLLEEISRVLKPGGTILIYKK 91 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~-~---~~L~ei~RvLKPGG~l~i~~~ 91 (271)
++.|++.++++.... ....++.++++|+.+++++ ++||+|++..+++|+++ . .++++++|+|||||+|++.++
T Consensus 152 s~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 228 (305)
T 3ocj_A 152 DPEALDGATRLAAGH--ALAGQITLHRQDAWKLDTR-EGYDLLTSNGLNIYEPDDARVTELYRRFWQALKPGGALVTSFL 228 (305)
T ss_dssp CHHHHHHHHHHHTTS--TTGGGEEEEECCGGGCCCC-SCEEEEECCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred CHHHHHHHHHHHHhc--CCCCceEEEECchhcCCcc-CCeEEEEECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 688899998874211 1123489999999999988 99999999999999875 3 379999999999999999986
Q ss_pred CCCCc----c-----cHH----------------------HHHHHHHHHHHHcCCcchhhhhhccccCcceeEEEEEeeC
Q 024162 92 LTSDK----G-----DVD----------------------KAISALEGKLLLAGFLDAQRIQLKSVVPAEVVSFGVKGKK 140 (271)
Q Consensus 92 ~~~~~----~-----e~~----------------------~~~~~l~~~l~laGF~~v~~~~~~~~~~~~~~~~~i~a~K 140 (271)
..... . ... ...+.+...+..+||..++..... ......+.++|
T Consensus 229 ~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~~~-----~~~~~~v~a~K 303 (305)
T 3ocj_A 229 TPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTHAQTRAQLEEAGFTDLRFEDDR-----ARLFPTVIARK 303 (305)
T ss_dssp CCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCHHHHHHHHHHTTCEEEEEECCT-----TSSSCEEEEEC
T ss_pred CCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhccCCHHHHHHHHHHCCCEEEEEEccc-----CceeeEEEEec
Confidence 53210 0 000 013466778899999987654321 11234577788
Q ss_pred CC
Q 024162 141 PT 142 (271)
Q Consensus 141 Ps 142 (271)
|.
T Consensus 304 pa 305 (305)
T 3ocj_A 304 PA 305 (305)
T ss_dssp CC
T ss_pred CC
Confidence 73
No 17
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=98.80 E-value=8.9e-09 Score=91.68 Aligned_cols=103 Identities=18% Similarity=0.275 Sum_probs=76.1
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCCh-HHHHHHHHHhccCCcEEEEEecCCC
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPG-DQLLEEISRVLKPGGTILIYKKLTS 94 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~-~~~L~ei~RvLKPGG~l~i~~~~~~ 94 (271)
++.|++.++++.... ....++.++++++..+|+++++||+|++..+++|+++ ..+|++++|+|||||+|++.++...
T Consensus 114 s~~~~~~a~~~~~~~--~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 191 (297)
T 2o57_A 114 APVQNKRNEEYNNQA--GLADNITVKYGSFLEIPCEDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDPMKE 191 (297)
T ss_dssp CHHHHHHHHHHHHHH--TCTTTEEEEECCTTSCSSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEEC
T ss_pred CHHHHHHHHHHHHhc--CCCcceEEEEcCcccCCCCCCCEeEEEecchhhhcCCHHHHHHHHHHHcCCCeEEEEEEeccC
Confidence 577888888764211 1224689999999999999999999999999999987 9999999999999999999986432
Q ss_pred Cc---ccHHH-----------HHHHHHHHHHHcCCcchhh
Q 024162 95 DK---GDVDK-----------AISALEGKLLLAGFLDAQR 120 (271)
Q Consensus 95 ~~---~e~~~-----------~~~~l~~~l~laGF~~v~~ 120 (271)
.. ..... ....+...+..+||..++.
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 231 (297)
T 2o57_A 192 DGIDKSSIQPILDRIKLHDMGSLGLYRSLAKECGLVTLRT 231 (297)
T ss_dssp TTCCGGGGHHHHHHHTCSSCCCHHHHHHHHHHTTEEEEEE
T ss_pred CCCchHHHHHHHHHhcCCCCCCHHHHHHHHHHCCCeEEEE
Confidence 11 11111 1234456677888876543
No 18
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=98.79 E-value=1.2e-08 Score=87.59 Aligned_cols=101 Identities=23% Similarity=0.229 Sum_probs=77.9
Q ss_pred cHHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCCh-HHHHHHHHHhccCCcEEEEEecCC
Q 024162 15 PVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPG-DQLLEEISRVLKPGGTILIYKKLT 93 (271)
Q Consensus 15 ~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~-~~~L~ei~RvLKPGG~l~i~~~~~ 93 (271)
.++.|++.++++.. ..++.++++++.++++++++||+|++..+++|+++ ..++++++|+|||||+|++.++..
T Consensus 83 ~s~~~~~~a~~~~~------~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 156 (242)
T 3l8d_A 83 ISEVMIQKGKERGE------GPDLSFIKGDLSSLPFENEQFEAIMAINSLEWTEEPLRALNEIKRVLKSDGYACIAILGP 156 (242)
T ss_dssp SCHHHHHHHHTTTC------BTTEEEEECBTTBCSSCTTCEEEEEEESCTTSSSCHHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred CCHHHHHHHHhhcc------cCCceEEEcchhcCCCCCCCccEEEEcChHhhccCHHHHHHHHHHHhCCCeEEEEEEcCC
Confidence 36788888887741 25789999999999999999999999999999987 899999999999999999998654
Q ss_pred CCccc---HH-----------HHHHHHHHHHHHcCCcchhhh
Q 024162 94 SDKGD---VD-----------KAISALEGKLLLAGFLDAQRI 121 (271)
Q Consensus 94 ~~~~e---~~-----------~~~~~l~~~l~laGF~~v~~~ 121 (271)
..... .. -....+...+..+||..++..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 198 (242)
T 3l8d_A 157 TAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFKVVDGI 198 (242)
T ss_dssp TCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEEEEEEE
T ss_pred cchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCEEEEee
Confidence 21100 00 012356677888999876543
No 19
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=98.78 E-value=1.4e-08 Score=94.59 Aligned_cols=107 Identities=20% Similarity=0.263 Sum_probs=79.1
Q ss_pred HHHHHHHHHHhCchhhh-----cCCCCeEEEeccCCCC------CCCCCceeEEEeccccccCCh-HHHHHHHHHhccCC
Q 024162 16 VSAVLNAIRDLGDEAVE-----QCDPQIITQASSLSQL------PVESFSIDTVLSISSSHELPG-DQLLEEISRVLKPG 83 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~-----~~~~~v~~~~~d~e~l------p~~~~sfD~V~s~~~l~~~~~-~~~L~ei~RvLKPG 83 (271)
++.|++.++++...... ....++.+++++++++ ++++++||+|++..+++++++ ..+|++++|+||||
T Consensus 117 s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~Lkpg 196 (383)
T 4fsd_A 117 LDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEGVPDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDG 196 (383)
T ss_dssp CHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCCCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE
T ss_pred CHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCCCCCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCC
Confidence 67888888876421100 1125799999999988 999999999999999999987 99999999999999
Q ss_pred cEEEEEecCCCCc--ccHHH-------------HHHHHHHHHHHcCCcchhhhh
Q 024162 84 GTILIYKKLTSDK--GDVDK-------------AISALEGKLLLAGFLDAQRIQ 122 (271)
Q Consensus 84 G~l~i~~~~~~~~--~e~~~-------------~~~~l~~~l~laGF~~v~~~~ 122 (271)
|+|++.++..... ..... .++.+...+..+||..++...
T Consensus 197 G~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF~~v~~~~ 250 (383)
T 4fsd_A 197 GELYFSDVYADRRLSEAAQQDPILYGECLGGALYLEDFRRLVAEAGFRDVRLVS 250 (383)
T ss_dssp EEEEEEEEEESSCCCHHHHHCHHHHHTTCTTCCBHHHHHHHHHHTTCCCEEEEE
T ss_pred CEEEEEEeccccccCHhHhhhHHHhhcccccCCCHHHHHHHHHHCCCceEEEEe
Confidence 9999987643211 00000 124677788999998765443
No 20
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=98.78 E-value=2.7e-08 Score=87.32 Aligned_cols=104 Identities=15% Similarity=0.201 Sum_probs=76.9
Q ss_pred cHHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCChHHHHHHHHHhccCCcEEEEEecCCC
Q 024162 15 PVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYKKLTS 94 (271)
Q Consensus 15 ~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~~~~L~ei~RvLKPGG~l~i~~~~~~ 94 (271)
.++.|++.++++.... ....++.+++++++++|+++++||+|++..+++++....++++++|+|||||+|++.+....
T Consensus 77 ~s~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~~~~~~fD~i~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 154 (267)
T 3kkz_A 77 FLSGFIDIFNRNARQS--GLQNRVTGIVGSMDDLPFRNEELDLIWSEGAIYNIGFERGLNEWRKYLKKGGYLAVSECSWF 154 (267)
T ss_dssp SCHHHHHHHHHHHHHT--TCTTTEEEEECCTTSCCCCTTCEEEEEESSCGGGTCHHHHHHHHGGGEEEEEEEEEEEEEES
T ss_pred CCHHHHHHHHHHHHHc--CCCcCcEEEEcChhhCCCCCCCEEEEEEcCCceecCHHHHHHHHHHHcCCCCEEEEEEeeec
Confidence 3678888888874211 12245999999999999999999999999999999559999999999999999999985311
Q ss_pred ---CcccHHHHH----------HHHHHHHHHcCCcchhh
Q 024162 95 ---DKGDVDKAI----------SALEGKLLLAGFLDAQR 120 (271)
Q Consensus 95 ---~~~e~~~~~----------~~l~~~l~laGF~~v~~ 120 (271)
........| ..+...+..+||..++.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~ 193 (267)
T 3kkz_A 155 TDERPAEINDFWMDAYPEIDTIPNQVAKIHKAGYLPVAT 193 (267)
T ss_dssp SSCCCHHHHHHHHHHCTTCEEHHHHHHHHHHTTEEEEEE
T ss_pred CCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCEEEEE
Confidence 111222222 34556678888887644
No 21
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=98.77 E-value=3.3e-08 Score=85.76 Aligned_cols=103 Identities=18% Similarity=0.280 Sum_probs=75.3
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCChHHHHHHHHHhccCCcEEEEEecC--C
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYKKL--T 93 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~~~~L~ei~RvLKPGG~l~i~~~~--~ 93 (271)
++.|++.++++.... ....++.+++++++.+|+++++||+|++..+++++....++++++|+|||||+|++.+.. .
T Consensus 78 s~~~~~~a~~~~~~~--~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 155 (257)
T 3f4k_A 78 FPDFIEIFNENAVKA--NCADRVKGITGSMDNLPFQNEELDLIWSEGAIYNIGFERGMNEWSKYLKKGGFIAVSEASWFT 155 (257)
T ss_dssp CHHHHHHHHHHHHHT--TCTTTEEEEECCTTSCSSCTTCEEEEEEESCSCCCCHHHHHHHHHTTEEEEEEEEEEEEEESS
T ss_pred CHHHHHHHHHHHHHc--CCCCceEEEECChhhCCCCCCCEEEEEecChHhhcCHHHHHHHHHHHcCCCcEEEEEEeeccC
Confidence 577888888764211 112358999999999999999999999999999996699999999999999999999843 1
Q ss_pred C-CcccHHHHH----------HHHHHHHHHcCCcchhh
Q 024162 94 S-DKGDVDKAI----------SALEGKLLLAGFLDAQR 120 (271)
Q Consensus 94 ~-~~~e~~~~~----------~~l~~~l~laGF~~v~~ 120 (271)
. ........| ..+...+..+||..+..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~ 193 (257)
T 3f4k_A 156 SERPAEIEDFWMDAYPEISVIPTCIDKMERAGYTPTAH 193 (257)
T ss_dssp SCCCHHHHHHHHHHCTTCCBHHHHHHHHHHTTEEEEEE
T ss_pred CCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCeEEEE
Confidence 1 111122222 34556677888877653
No 22
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=98.77 E-value=1.7e-08 Score=89.19 Aligned_cols=71 Identities=17% Similarity=0.230 Sum_probs=61.6
Q ss_pred cHHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCCh-HHHHHHHHHhccCCcEEEEEecCC
Q 024162 15 PVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPG-DQLLEEISRVLKPGGTILIYKKLT 93 (271)
Q Consensus 15 ~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~-~~~L~ei~RvLKPGG~l~i~~~~~ 93 (271)
.++.|++.++++. .++.+++++++.+|+ +++||+|++..+++|+.+ ..+|++++|+|||||+|++..+..
T Consensus 87 ~s~~~~~~a~~~~--------~~~~~~~~d~~~~~~-~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~~~~~ 157 (279)
T 3ccf_A 87 NAATMIEKARQNY--------PHLHFDVADARNFRV-DKPLDAVFSNAMLHWVKEPEAAIASIHQALKSGGRFVAEFGGK 157 (279)
T ss_dssp SCHHHHHHHHHHC--------TTSCEEECCTTTCCC-SSCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred CCHHHHHHHHhhC--------CCCEEEECChhhCCc-CCCcCEEEEcchhhhCcCHHHHHHHHHHhcCCCcEEEEEecCC
Confidence 3678888888775 456788999999998 579999999999999887 899999999999999999988764
Q ss_pred C
Q 024162 94 S 94 (271)
Q Consensus 94 ~ 94 (271)
.
T Consensus 158 ~ 158 (279)
T 3ccf_A 158 G 158 (279)
T ss_dssp T
T ss_pred c
Confidence 3
No 23
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=98.76 E-value=2.8e-08 Score=87.09 Aligned_cols=76 Identities=28% Similarity=0.417 Sum_probs=63.4
Q ss_pred cHHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCCh-HHHHHHHHHhccCCcEEEEEecC
Q 024162 15 PVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPG-DQLLEEISRVLKPGGTILIYKKL 92 (271)
Q Consensus 15 ~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~-~~~L~ei~RvLKPGG~l~i~~~~ 92 (271)
.++.|++.++++.... ....++.++.+++..+|+++++||+|++..+++|+++ ..+|++++|+|||||+|++.++.
T Consensus 92 ~s~~~~~~a~~~~~~~--~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 168 (273)
T 3bus_A 92 ISRPQVNQANARATAA--GLANRVTFSYADAMDLPFEDASFDAVWALESLHHMPDRGRALREMARVLRPGGTVAIADFV 168 (273)
T ss_dssp SCHHHHHHHHHHHHHT--TCTTTEEEEECCTTSCCSCTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHhc--CCCcceEEEECccccCCCCCCCccEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEEee
Confidence 3678888888774211 1123689999999999999999999999999999977 89999999999999999999865
No 24
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=98.75 E-value=2e-08 Score=88.24 Aligned_cols=75 Identities=23% Similarity=0.325 Sum_probs=63.2
Q ss_pred cHHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCCh-HHHHHHHHHhccCCcEEEEEecC
Q 024162 15 PVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPG-DQLLEEISRVLKPGGTILIYKKL 92 (271)
Q Consensus 15 ~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~-~~~L~ei~RvLKPGG~l~i~~~~ 92 (271)
.++.|++.++++... ....++.+..+++..+++++++||+|++..+++++++ ..++++++|+|||||+|++.++.
T Consensus 69 ~s~~~~~~a~~~~~~---~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 144 (276)
T 3mgg_A 69 ISPESLEKARENTEK---NGIKNVKFLQANIFSLPFEDSSFDHIFVCFVLEHLQSPEEALKSLKKVLKPGGTITVIEGD 144 (276)
T ss_dssp SCHHHHHHHHHHHHH---TTCCSEEEEECCGGGCCSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCHHHHHHHHHHHHH---cCCCCcEEEEcccccCCCCCCCeeEEEEechhhhcCCHHHHHHHHHHHcCCCcEEEEEEcC
Confidence 367788888877421 1124689999999999999999999999999999987 89999999999999999998854
No 25
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=98.73 E-value=3.5e-08 Score=85.63 Aligned_cols=71 Identities=27% Similarity=0.394 Sum_probs=62.1
Q ss_pred cHHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCCh-HHHHHHHHHhccCCcEEEEE
Q 024162 15 PVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPG-DQLLEEISRVLKPGGTILIY 89 (271)
Q Consensus 15 ~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~-~~~L~ei~RvLKPGG~l~i~ 89 (271)
.++.|++.++++.. ....++.+++++++.+|+++++||+|++..++||+++ ..++++++|+|||||+|++.
T Consensus 69 ~s~~~~~~a~~~~~----~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 69 ADAAMLEVFRQKIA----GVDRKVQVVQADARAIPLPDESVHGVIVVHLWHLVPDWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp SCHHHHHHHHHHTT----TSCTTEEEEESCTTSCCSCTTCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCHHHHHHHHHHhh----ccCCceEEEEcccccCCCCCCCeeEEEECCchhhcCCHHHHHHHHHHHCCCCcEEEEE
Confidence 46888999988751 1235789999999999999999999999999999987 89999999999999999987
No 26
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=98.73 E-value=9.6e-09 Score=88.88 Aligned_cols=102 Identities=12% Similarity=0.134 Sum_probs=77.3
Q ss_pred cHHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCCh---HHHHHHHHHhccCCcEEEEEec
Q 024162 15 PVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPG---DQLLEEISRVLKPGGTILIYKK 91 (271)
Q Consensus 15 ~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~---~~~L~ei~RvLKPGG~l~i~~~ 91 (271)
.++.|++.++++.... .++.++++++..+++++++||+|++..+++|+++ ..+|++++|+|||||+|++.++
T Consensus 124 ~s~~~~~~a~~~~~~~-----~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 198 (254)
T 1xtp_A 124 PVKHMLEEAKRELAGM-----PVGKFILASMETATLPPNTYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKEN 198 (254)
T ss_dssp SCHHHHHHHHHHTTTS-----SEEEEEESCGGGCCCCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHhccC-----CceEEEEccHHHCCCCCCCeEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 3688999999875221 5688999999999999999999999999999953 7899999999999999999985
Q ss_pred CCCCc--------ccHHHHHHHHHHHHHHcCCcchhhh
Q 024162 92 LTSDK--------GDVDKAISALEGKLLLAGFLDAQRI 121 (271)
Q Consensus 92 ~~~~~--------~e~~~~~~~l~~~l~laGF~~v~~~ 121 (271)
..... .......+.+...+..+||..++..
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~ 236 (254)
T 1xtp_A 199 CSTGDRFLVDKEDSSLTRSDIHYKRLFNESGVRVVKEA 236 (254)
T ss_dssp BC--CCEEEETTTTEEEBCHHHHHHHHHHHTCCEEEEE
T ss_pred CCCcccceecccCCcccCCHHHHHHHHHHCCCEEEEee
Confidence 32100 0000112366777889999876553
No 27
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.72 E-value=5.5e-09 Score=93.37 Aligned_cols=80 Identities=13% Similarity=0.061 Sum_probs=60.4
Q ss_pred ccHHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCC------CCCCceeEEEeccccccCCh-HHHHHHHHHhccCCcEE
Q 024162 14 LPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLP------VESFSIDTVLSISSSHELPG-DQLLEEISRVLKPGGTI 86 (271)
Q Consensus 14 ~~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp------~~~~sfD~V~s~~~l~~~~~-~~~L~ei~RvLKPGG~l 86 (271)
-+|+.|++.++++........+..+.+..++++.++ +++++||+|++..++||+++ ..+|++++|+|||||+|
T Consensus 89 D~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l 168 (292)
T 2aot_A 89 EPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKM 168 (292)
T ss_dssp CSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTTTCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEE
T ss_pred eCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccccCCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEE
Confidence 368899999998742110011223455666666554 67899999999999999998 88999999999999999
Q ss_pred EEEecCC
Q 024162 87 LIYKKLT 93 (271)
Q Consensus 87 ~i~~~~~ 93 (271)
++.....
T Consensus 169 ~i~~~~~ 175 (292)
T 2aot_A 169 LIIVVSG 175 (292)
T ss_dssp EEEEECT
T ss_pred EEEEecC
Confidence 9987543
No 28
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=98.71 E-value=2.8e-08 Score=83.94 Aligned_cols=119 Identities=18% Similarity=0.147 Sum_probs=82.6
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCC--h-HHHHHHHHHhccCCcEEEEEecC
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELP--G-DQLLEEISRVLKPGGTILIYKKL 92 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~--~-~~~L~ei~RvLKPGG~l~i~~~~ 92 (271)
++.|++.++++. .+.+..+++..++ .+++||+|++..++++++ + ..+|++++|+|||||+|++..+.
T Consensus 74 s~~~~~~a~~~~---------~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 143 (211)
T 3e23_A 74 SPELAAEASRRL---------GRPVRTMLFHQLD-AIDAYDAVWAHACLLHVPRDELADVLKLIWRALKPGGLFYASYKS 143 (211)
T ss_dssp CHHHHHHHHHHH---------TSCCEECCGGGCC-CCSCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CHHHHHHHHHhc---------CCceEEeeeccCC-CCCcEEEEEecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEEEcC
Confidence 577888888764 2456778899888 789999999999999997 4 78999999999999999998765
Q ss_pred CCCcc-c-H-----HHHHHHHHHHHHHcC-Ccchhhhhhcccc--CcceeEEEEEeeCCCcc
Q 024162 93 TSDKG-D-V-----DKAISALEGKLLLAG-FLDAQRIQLKSVV--PAEVVSFGVKGKKPTWK 144 (271)
Q Consensus 93 ~~~~~-e-~-----~~~~~~l~~~l~laG-F~~v~~~~~~~~~--~~~~~~~~i~a~KPs~~ 144 (271)
..... . . .-..+.+...+..+| |..++........ .....++.+..++|.++
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~ 205 (211)
T 3e23_A 144 GEGEGRDKLARYYNYPSEEWLRARYAEAGTWASVAVESSEGKGFDQELAQFLHVSVRKPELE 205 (211)
T ss_dssp CSSCEECTTSCEECCCCHHHHHHHHHHHCCCSEEEEEEEEEECTTSCEEEEEEEEEECCCC-
T ss_pred CCcccccccchhccCCCHHHHHHHHHhCCCcEEEEEEeccCCCCCCCCceEEEEEEecCccc
Confidence 32100 0 0 001246777889999 9987654322111 11124666777777654
No 29
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=98.70 E-value=7.3e-08 Score=81.89 Aligned_cols=78 Identities=17% Similarity=0.237 Sum_probs=63.0
Q ss_pred HHHHHHHHHHhCchh-h-hcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCCh-H---HHHHHHHHhccCCcEEEEE
Q 024162 16 VSAVLNAIRDLGDEA-V-EQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPG-D---QLLEEISRVLKPGGTILIY 89 (271)
Q Consensus 16 s~~mv~~ar~~~~~~-~-~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~-~---~~L~ei~RvLKPGG~l~i~ 89 (271)
++.|++.++++.... . .....++.+..+++..+++++++||+|++..+++++++ . .++++++|+|||||+|++.
T Consensus 61 s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (235)
T 3sm3_A 61 NSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLV 140 (235)
T ss_dssp CHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 678888888874221 0 00112588999999999999999999999999999976 4 8999999999999999999
Q ss_pred ecCC
Q 024162 90 KKLT 93 (271)
Q Consensus 90 ~~~~ 93 (271)
++..
T Consensus 141 ~~~~ 144 (235)
T 3sm3_A 141 EFGQ 144 (235)
T ss_dssp EEBC
T ss_pred ECCc
Confidence 8754
No 30
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=98.68 E-value=6.9e-08 Score=84.36 Aligned_cols=67 Identities=18% Similarity=0.315 Sum_probs=58.1
Q ss_pred cHHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEecc-ccccCCh----HHHHHHHHHhccCCcEEEEE
Q 024162 15 PVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSIS-SSHELPG----DQLLEEISRVLKPGGTILIY 89 (271)
Q Consensus 15 ~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~-~l~~~~~----~~~L~ei~RvLKPGG~l~i~ 89 (271)
.++.|++.++++. .++.++++++.++++ +++||+|++.. +++|+.+ ..+|++++|+|||||+|++.
T Consensus 80 ~s~~~~~~a~~~~--------~~~~~~~~d~~~~~~-~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 80 LSADMLAIARRRN--------PDAVLHHGDMRDFSL-GRRFSAVTCMFSSIGHLAGQAELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp SCHHHHHHHHHHC--------TTSEEEECCTTTCCC-SCCEEEEEECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred CCHHHHHHHHhhC--------CCCEEEECChHHCCc-cCCcCEEEEcCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 3688999999875 357899999999988 78999999987 8999863 67899999999999999996
Q ss_pred e
Q 024162 90 K 90 (271)
Q Consensus 90 ~ 90 (271)
.
T Consensus 151 ~ 151 (263)
T 3pfg_A 151 P 151 (263)
T ss_dssp C
T ss_pred e
Confidence 4
No 31
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.68 E-value=1.5e-08 Score=86.89 Aligned_cols=71 Identities=21% Similarity=0.330 Sum_probs=61.9
Q ss_pred cHHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCCh-HHHHHHHHHhccCCcEEEEEec
Q 024162 15 PVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPG-DQLLEEISRVLKPGGTILIYKK 91 (271)
Q Consensus 15 ~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~-~~~L~ei~RvLKPGG~l~i~~~ 91 (271)
.++.|++.++++... .++.++++++..+++++++||+|++..+++++.+ ..++++++|+|||||+|++.+.
T Consensus 74 ~s~~~~~~a~~~~~~------~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 145 (243)
T 3bkw_A 74 LSEKMLARARAAGPD------TGITYERADLDKLHLPQDSFDLAYSSLALHYVEDVARLFRTVHQALSPGGHFVFSTE 145 (243)
T ss_dssp SCHHHHHHHHHTSCS------SSEEEEECCGGGCCCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCHHHHHHHHHhccc------CCceEEEcChhhccCCCCCceEEEEeccccccchHHHHHHHHHHhcCcCcEEEEEeC
Confidence 357889999887521 3688999999999998999999999999999977 8999999999999999999874
No 32
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=98.68 E-value=4.2e-08 Score=88.44 Aligned_cols=103 Identities=13% Similarity=0.088 Sum_probs=75.9
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCChHHHHHHHHHhccCCcEEEEEecCCCC
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYKKLTSD 95 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~~~~L~ei~RvLKPGG~l~i~~~~~~~ 95 (271)
++.|++.++++.... ....++.+++++++++|+++++||+|++..+++++....+|++++|+|||||+|++.++....
T Consensus 149 s~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 226 (312)
T 3vc1_A 149 SAAQADFGNRRAREL--RIDDHVRSRVCNMLDTPFDKGAVTASWNNESTMYVDLHDLFSEHSRFLKVGGRYVTITGCWNP 226 (312)
T ss_dssp CHHHHHHHHHHHHHT--TCTTTEEEEECCTTSCCCCTTCEEEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEEEEEEECT
T ss_pred CHHHHHHHHHHHHHc--CCCCceEEEECChhcCCCCCCCEeEEEECCchhhCCHHHHHHHHHHHcCCCcEEEEEEccccc
Confidence 678888888874221 122368999999999999999999999999999996699999999999999999999864321
Q ss_pred c----ccHHH-----------HHHHHHHHHHHcCCcchhh
Q 024162 96 K----GDVDK-----------AISALEGKLLLAGFLDAQR 120 (271)
Q Consensus 96 ~----~e~~~-----------~~~~l~~~l~laGF~~v~~ 120 (271)
. ..... ..+.+...+..+||..++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~~ 266 (312)
T 3vc1_A 227 RYGQPSKWVSQINAHFECNIHSRREYLRAMADNRLVPHTI 266 (312)
T ss_dssp TTCSCCHHHHHHHHHHTCCCCBHHHHHHHHHTTTEEEEEE
T ss_pred cccchhHHHHHHHhhhcCCCCCHHHHHHHHHHCCCEEEEE
Confidence 1 01100 1234556677788876543
No 33
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=98.67 E-value=3.8e-08 Score=82.98 Aligned_cols=72 Identities=26% Similarity=0.329 Sum_probs=63.7
Q ss_pred cHHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCCh-HHHHHHHHHhccCCcEEEEEecCC
Q 024162 15 PVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPG-DQLLEEISRVLKPGGTILIYKKLT 93 (271)
Q Consensus 15 ~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~-~~~L~ei~RvLKPGG~l~i~~~~~ 93 (271)
.++.|++.++++. .++.++++++.++|+++++||+|++..+++|+++ ..++++++|+|||||++++.++..
T Consensus 64 ~s~~~~~~a~~~~--------~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 135 (211)
T 2gs9_A 64 PSEAMLAVGRRRA--------PEATWVRAWGEALPFPGESFDVVLLFTTLEFVEDVERVLLEARRVLRPGGALVVGVLEA 135 (211)
T ss_dssp CCHHHHHHHHHHC--------TTSEEECCCTTSCCSCSSCEEEEEEESCTTTCSCHHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred CCHHHHHHHHHhC--------CCcEEEEcccccCCCCCCcEEEEEEcChhhhcCCHHHHHHHHHHHcCCCCEEEEEecCC
Confidence 4678888888875 4578899999999999999999999999999987 899999999999999999998765
Q ss_pred C
Q 024162 94 S 94 (271)
Q Consensus 94 ~ 94 (271)
.
T Consensus 136 ~ 136 (211)
T 2gs9_A 136 L 136 (211)
T ss_dssp T
T ss_pred c
Confidence 3
No 34
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=98.67 E-value=2.4e-08 Score=86.27 Aligned_cols=104 Identities=15% Similarity=0.139 Sum_probs=77.8
Q ss_pred cHHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCCh---HHHHHHHHHhccCCcEEEEEec
Q 024162 15 PVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPG---DQLLEEISRVLKPGGTILIYKK 91 (271)
Q Consensus 15 ~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~---~~~L~ei~RvLKPGG~l~i~~~ 91 (271)
.++.|++.++++.... ...++.++.+++..+++++++||+|++..+++++++ ..+|++++|+|||||+|++.++
T Consensus 110 ~s~~~~~~a~~~~~~~---~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 186 (241)
T 2ex4_A 110 ITEDFLVQAKTYLGEE---GKRVRNYFCCGLQDFTPEPDSYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDN 186 (241)
T ss_dssp SCHHHHHHHHHHTGGG---GGGEEEEEECCGGGCCCCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHhhhc---CCceEEEEEcChhhcCCCCCCEEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEc
Confidence 3688899999875321 124688999999999998889999999999999986 3799999999999999999875
Q ss_pred CCCC-------cccHHHHHHHHHHHHHHcCCcchhhh
Q 024162 92 LTSD-------KGDVDKAISALEGKLLLAGFLDAQRI 121 (271)
Q Consensus 92 ~~~~-------~~e~~~~~~~l~~~l~laGF~~v~~~ 121 (271)
.... ........+.+...+..+||..+...
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~ 223 (241)
T 2ex4_A 187 MAQEGVILDDVDSSVCRDLDVVRRIICSAGLSLLAEE 223 (241)
T ss_dssp EBSSSEEEETTTTEEEEBHHHHHHHHHHTTCCEEEEE
T ss_pred cCCCcceecccCCcccCCHHHHHHHHHHcCCeEEEee
Confidence 3211 00000123467777889999876654
No 35
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=98.65 E-value=8.1e-08 Score=82.17 Aligned_cols=72 Identities=14% Similarity=0.160 Sum_probs=59.0
Q ss_pred cHHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEecc-ccccCC---h-HHHHHHHHHhccCCcEEEEE
Q 024162 15 PVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSIS-SSHELP---G-DQLLEEISRVLKPGGTILIY 89 (271)
Q Consensus 15 ~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~-~l~~~~---~-~~~L~ei~RvLKPGG~l~i~ 89 (271)
.++.|++.++++... .+.++.++++++..++++ ++||+|++.. +++|++ + ..+|++++|+|||||+|++.
T Consensus 67 ~s~~~~~~a~~~~~~----~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 141 (246)
T 1y8c_A 67 LSQEMLSEAENKFRS----QGLKPRLACQDISNLNIN-RKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFD 141 (246)
T ss_dssp SCHHHHHHHHHHHHH----TTCCCEEECCCGGGCCCS-CCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHhh----cCCCeEEEecccccCCcc-CCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 367888888887421 123688999999999887 8999999998 999983 3 88999999999999999986
Q ss_pred ec
Q 024162 90 KK 91 (271)
Q Consensus 90 ~~ 91 (271)
.+
T Consensus 142 ~~ 143 (246)
T 1y8c_A 142 IN 143 (246)
T ss_dssp EE
T ss_pred ec
Confidence 44
No 36
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=98.64 E-value=2.5e-08 Score=84.71 Aligned_cols=75 Identities=11% Similarity=0.105 Sum_probs=58.1
Q ss_pred HHHHHHHHHHhCchhh---------hcCCCCeEEEeccCCCCCCCC-CceeEEEeccccccCCh---HHHHHHHHHhccC
Q 024162 16 VSAVLNAIRDLGDEAV---------EQCDPQIITQASSLSQLPVES-FSIDTVLSISSSHELPG---DQLLEEISRVLKP 82 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~---------~~~~~~v~~~~~d~e~lp~~~-~sfD~V~s~~~l~~~~~---~~~L~ei~RvLKP 82 (271)
|+.|++.++++..... .....++.++++|+.++++++ ++||+|++..++++++. ..++++++|+|||
T Consensus 53 S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~Lkp 132 (203)
T 1pjz_A 53 SEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQ 132 (203)
T ss_dssp CHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCS
T ss_pred CHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCC
Confidence 7889999988742100 001257899999999999876 89999999888888875 5689999999999
Q ss_pred CcEEEEEe
Q 024162 83 GGTILIYK 90 (271)
Q Consensus 83 GG~l~i~~ 90 (271)
||++++..
T Consensus 133 gG~~~l~~ 140 (203)
T 1pjz_A 133 ACSGLLIT 140 (203)
T ss_dssp EEEEEEEE
T ss_pred CcEEEEEE
Confidence 99944443
No 37
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.63 E-value=2.4e-07 Score=76.08 Aligned_cols=93 Identities=14% Similarity=0.039 Sum_probs=72.1
Q ss_pred cHHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEec-cccccCCh---HHHHHHHHHhccCCcEEEEEe
Q 024162 15 PVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSI-SSSHELPG---DQLLEEISRVLKPGGTILIYK 90 (271)
Q Consensus 15 ~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~-~~l~~~~~---~~~L~ei~RvLKPGG~l~i~~ 90 (271)
.++.|++.++++. .++.++++++..+++++++||+|++. ..++++.. ..++++++++|||||++++..
T Consensus 76 ~~~~~~~~a~~~~--------~~~~~~~~d~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~ 147 (195)
T 3cgg_A 76 LDPILIDYAKQDF--------PEARWVVGDLSVDQISETDFDLIVSAGNVMGFLAEDGREPALANIHRALGADGRAVIGF 147 (195)
T ss_dssp SCHHHHHHHHHHC--------TTSEEEECCTTTSCCCCCCEEEEEECCCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCHHHHHHHHHhC--------CCCcEEEcccccCCCCCCceeEEEECCcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEe
Confidence 3577888888765 34788999999999988999999997 67777753 789999999999999999987
Q ss_pred cCCCCcccHHHHHHHHHHHHHHcCCcchhh
Q 024162 91 KLTSDKGDVDKAISALEGKLLLAGFLDAQR 120 (271)
Q Consensus 91 ~~~~~~~e~~~~~~~l~~~l~laGF~~v~~ 120 (271)
...... . ...+...+..+||..+..
T Consensus 148 ~~~~~~-~----~~~~~~~l~~~Gf~~~~~ 172 (195)
T 3cgg_A 148 GAGRGW-V----FGDFLEVAERVGLELENA 172 (195)
T ss_dssp ETTSSC-C----HHHHHHHHHHHTEEEEEE
T ss_pred CCCCCc-C----HHHHHHHHHHcCCEEeee
Confidence 653211 1 125667788899987654
No 38
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=98.62 E-value=1.8e-07 Score=78.65 Aligned_cols=70 Identities=13% Similarity=0.195 Sum_probs=60.3
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCCh---HHHHHHHHHhccCCcEEEEEecC
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPG---DQLLEEISRVLKPGGTILIYKKL 92 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~---~~~L~ei~RvLKPGG~l~i~~~~ 92 (271)
++.|++.+++.. ..++.++++++.++ +++++||+|++..+++|+++ ..+|++++|+|||||+|++.++.
T Consensus 77 s~~~~~~a~~~~-------~~~~~~~~~d~~~~-~~~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 148 (218)
T 3ou2_A 77 SAEMIAEAGRHG-------LDNVEFRQQDLFDW-TPDRQWDAVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVT 148 (218)
T ss_dssp CHHHHHHHGGGC-------CTTEEEEECCTTSC-CCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CHHHHHHHHhcC-------CCCeEEEecccccC-CCCCceeEEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 677888887732 15689999999988 88899999999999999987 78999999999999999999875
Q ss_pred C
Q 024162 93 T 93 (271)
Q Consensus 93 ~ 93 (271)
.
T Consensus 149 ~ 149 (218)
T 3ou2_A 149 D 149 (218)
T ss_dssp C
T ss_pred C
Confidence 3
No 39
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=98.62 E-value=4.1e-08 Score=86.58 Aligned_cols=82 Identities=23% Similarity=0.239 Sum_probs=59.2
Q ss_pred EEeccCCC-CCCC---CCceeEEEeccccccC-C---h-HHHHHHHHHhccCCcEEEEEecCCCCc---c-----cHHHH
Q 024162 40 TQASSLSQ-LPVE---SFSIDTVLSISSSHEL-P---G-DQLLEEISRVLKPGGTILIYKKLTSDK---G-----DVDKA 102 (271)
Q Consensus 40 ~~~~d~e~-lp~~---~~sfD~V~s~~~l~~~-~---~-~~~L~ei~RvLKPGG~l~i~~~~~~~~---~-----e~~~~ 102 (271)
++++|+.. .|++ .++||+|++++++|++ + + ..++++++|+|||||+|++........ + ...-.
T Consensus 138 ~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~~~~g~~~~~~~~~~ 217 (263)
T 2a14_A 138 VLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPSYMVGKREFSCVALE 217 (263)
T ss_dssp EEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEECCCCC
T ss_pred EEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCccceeCCeEeeccccC
Confidence 78899887 3543 6799999999999885 2 3 689999999999999999997543210 0 00001
Q ss_pred HHHHHHHHHHcCCcchhhh
Q 024162 103 ISALEGKLLLAGFLDAQRI 121 (271)
Q Consensus 103 ~~~l~~~l~laGF~~v~~~ 121 (271)
.+.+...+..+||..++..
T Consensus 218 ~~~l~~~l~~aGF~i~~~~ 236 (263)
T 2a14_A 218 KGEVEQAVLDAGFDIEQLL 236 (263)
T ss_dssp HHHHHHHHHHTTEEEEEEE
T ss_pred HHHHHHHHHHCCCEEEEEe
Confidence 2367778899999876543
No 40
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=98.61 E-value=4.5e-08 Score=84.49 Aligned_cols=95 Identities=15% Similarity=0.025 Sum_probs=70.5
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCC--CCCCCceeEEEeccccccCCh---HHHHHHHHHhccCCcEEEEEe
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQL--PVESFSIDTVLSISSSHELPG---DQLLEEISRVLKPGGTILIYK 90 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~l--p~~~~sfD~V~s~~~l~~~~~---~~~L~ei~RvLKPGG~l~i~~ 90 (271)
++.|++.++++ +.++.+++.++ |+++++||+|++..+++|+++ ..++++++|+|||||+|++..
T Consensus 72 s~~~~~~a~~~-----------~~~~~~d~~~~~~~~~~~~fD~i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 140 (240)
T 3dli_A 72 NEDMIKFCEGK-----------FNVVKSDAIEYLKSLPDKYLDGVMISHFVEHLDPERLFELLSLCYSKMKYSSYIVIES 140 (240)
T ss_dssp CHHHHHHHHTT-----------SEEECSCHHHHHHTSCTTCBSEEEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEE
T ss_pred CHHHHHHHHhh-----------cceeeccHHHHhhhcCCCCeeEEEECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEe
Confidence 56666666654 46778888775 889999999999999999973 799999999999999999998
Q ss_pred cCCCCcccHHH-----------HHHHHHHHHHHcCCcchhhh
Q 024162 91 KLTSDKGDVDK-----------AISALEGKLLLAGFLDAQRI 121 (271)
Q Consensus 91 ~~~~~~~e~~~-----------~~~~l~~~l~laGF~~v~~~ 121 (271)
+.......... ..+.+...+..+||..+...
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~ 182 (240)
T 3dli_A 141 PNPTSLYSLINFYIDPTHKKPVHPETLKFILEYLGFRDVKIE 182 (240)
T ss_dssp ECTTSHHHHHHHTTSTTCCSCCCHHHHHHHHHHHTCEEEEEE
T ss_pred CCcchhHHHHHHhcCccccccCCHHHHHHHHHHCCCeEEEEE
Confidence 76532211110 11356677888888865543
No 41
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.61 E-value=1.3e-07 Score=80.68 Aligned_cols=96 Identities=19% Similarity=0.210 Sum_probs=72.3
Q ss_pred cHHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCCh-HHHHHHHHHhccCCcEEEEEecCC
Q 024162 15 PVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPG-DQLLEEISRVLKPGGTILIYKKLT 93 (271)
Q Consensus 15 ~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~-~~~L~ei~RvLKPGG~l~i~~~~~ 93 (271)
.++.|++.++++ ++.++.+++..+++++++||+|++..+++++++ ..+|++++|+|||||+|++.++..
T Consensus 73 ~s~~~~~~a~~~----------~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 142 (219)
T 1vlm_A 73 PSERMAEIARKR----------GVFVLKGTAENLPLKDESFDFALMVTTICFVDDPERALKEAYRILKKGGYLIVGIVDR 142 (219)
T ss_dssp SCHHHHHHHHHT----------TCEEEECBTTBCCSCTTCEEEEEEESCGGGSSCHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred CCHHHHHHHHhc----------CCEEEEcccccCCCCCCCeeEEEEcchHhhccCHHHHHHHHHHHcCCCcEEEEEEeCC
Confidence 367788887766 257888999999999999999999999999977 899999999999999999998654
Q ss_pred CCcc-cHH---------------HHHHHHHHHHHHcCCcchhh
Q 024162 94 SDKG-DVD---------------KAISALEGKLLLAGFLDAQR 120 (271)
Q Consensus 94 ~~~~-e~~---------------~~~~~l~~~l~laGF~~v~~ 120 (271)
.... ... -..+.+...+..+||..++.
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~ 185 (219)
T 1vlm_A 143 ESFLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEFKV 185 (219)
T ss_dssp SSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEEEE
T ss_pred ccHHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEEEE
Confidence 2110 000 01235566677788876543
No 42
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=98.61 E-value=5.1e-08 Score=86.31 Aligned_cols=76 Identities=11% Similarity=0.166 Sum_probs=63.1
Q ss_pred cHHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCC-CCCCceeEEEeccccccCCh-HHHHHHHHHhccCCcEEEEEecC
Q 024162 15 PVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLP-VESFSIDTVLSISSSHELPG-DQLLEEISRVLKPGGTILIYKKL 92 (271)
Q Consensus 15 ~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp-~~~~sfD~V~s~~~l~~~~~-~~~L~ei~RvLKPGG~l~i~~~~ 92 (271)
.++.|++.++++.... ....++.++++++..++ +.+++||+|++..+++|+++ ..++++++|+|||||+|++.++.
T Consensus 98 ~s~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 175 (285)
T 4htf_A 98 LSAQMIDRAKQAAEAK--GVSDNMQFIHCAAQDVASHLETPVDLILFHAVLEWVADPRSVLQTLWSVLRPGGVLSLMFYN 175 (285)
T ss_dssp SCHHHHHHHHHHHHC---CCGGGEEEEESCGGGTGGGCSSCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEEB
T ss_pred CCHHHHHHHHHHHHhc--CCCcceEEEEcCHHHhhhhcCCCceEEEECchhhcccCHHHHHHHHHHHcCCCeEEEEEEeC
Confidence 3678888888874211 11146899999999988 88899999999999999987 89999999999999999998864
No 43
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=98.59 E-value=1e-07 Score=80.44 Aligned_cols=97 Identities=20% Similarity=0.181 Sum_probs=69.5
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCC---CCCCC-ceeEEEeccccccCCh-HHHHHHHHHhccCCcEEEEEe
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQL---PVESF-SIDTVLSISSSHELPG-DQLLEEISRVLKPGGTILIYK 90 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~l---p~~~~-sfD~V~s~~~l~~~~~-~~~L~ei~RvLKPGG~l~i~~ 90 (271)
++.|++.++++. .+.+..+++..+ ++..+ +||+|++..+++ ..+ ..++++++|+|||||+|++.+
T Consensus 83 s~~~~~~a~~~~---------~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~l~-~~~~~~~l~~~~~~L~pgG~l~~~~ 152 (227)
T 3e8s_A 83 DRTLVDAARAAG---------AGEVHLASYAQLAEAKVPVGKDYDLICANFALL-HQDIIELLSAMRTLLVPGGALVIQT 152 (227)
T ss_dssp CHHHHHHHHHTC---------SSCEEECCHHHHHTTCSCCCCCEEEEEEESCCC-SSCCHHHHHHHHHTEEEEEEEEEEE
T ss_pred CHHHHHHHHHhc---------ccccchhhHHhhcccccccCCCccEEEECchhh-hhhHHHHHHHHHHHhCCCeEEEEEe
Confidence 678888888772 234566777666 65554 499999999888 555 999999999999999999998
Q ss_pred cCCCCccc------------------------HHHHHHHHHHHHHHcCCcchhhhh
Q 024162 91 KLTSDKGD------------------------VDKAISALEGKLLLAGFLDAQRIQ 122 (271)
Q Consensus 91 ~~~~~~~e------------------------~~~~~~~l~~~l~laGF~~v~~~~ 122 (271)
+....... .....+.+...+..+||..++...
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 208 (227)
T 3e8s_A 153 LHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALDMAGLRLVSLQE 208 (227)
T ss_dssp CCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHTTEEEEEEEC
T ss_pred cCccccCccccccccchhhhhccccCcccceEEEecHHHHHHHHHHcCCeEEEEec
Confidence 64321100 000234777889999999876543
No 44
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=98.57 E-value=1.1e-07 Score=82.39 Aligned_cols=70 Identities=14% Similarity=0.150 Sum_probs=61.4
Q ss_pred cHHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCCh-HHHHHHHHHhccCCcEEEEEecCC
Q 024162 15 PVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPG-DQLLEEISRVLKPGGTILIYKKLT 93 (271)
Q Consensus 15 ~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~-~~~L~ei~RvLKPGG~l~i~~~~~ 93 (271)
.++.|++.++++. .++.+++++++.++ ++++||+|++..++||+++ ..+|++++|+|||||+|++.++..
T Consensus 65 ~s~~~~~~a~~~~--------~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 135 (259)
T 2p35_A 65 SDDDMLEKAADRL--------PNTNFGKADLATWK-PAQKADLLYANAVFQWVPDHLAVLSQLMDQLESGGVLAVQMPDN 135 (259)
T ss_dssp SCHHHHHHHHHHS--------TTSEEEECCTTTCC-CSSCEEEEEEESCGGGSTTHHHHHHHHGGGEEEEEEEEEEEECC
T ss_pred CCHHHHHHHHHhC--------CCcEEEECChhhcC-ccCCcCEEEEeCchhhCCCHHHHHHHHHHhcCCCeEEEEEeCCC
Confidence 3678888888773 46789999999998 7889999999999999987 899999999999999999998653
No 45
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=98.55 E-value=2.1e-07 Score=82.70 Aligned_cols=72 Identities=13% Similarity=0.172 Sum_probs=61.5
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCCh-HHHHHHHHHhccCCcEEEEEecC
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPG-DQLLEEISRVLKPGGTILIYKKL 92 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~-~~~L~ei~RvLKPGG~l~i~~~~ 92 (271)
++.|++.++++... ...++.++++|+.+++++ ++||+|++..+++++++ ..++++++|+|||||+|++.++.
T Consensus 56 s~~~~~~a~~~~~~----~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 56 GETLLAEARELFRL----LPYDSEFLEGDATEIELN-DKYDIAICHAFLLHMTTPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp CHHHHHHHHHHHHS----SSSEEEEEESCTTTCCCS-SCEEEEEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CHHHHHHHHHHHHh----cCCceEEEEcchhhcCcC-CCeeEEEECChhhcCCCHHHHHHHHHHHcCCCCEEEEEecc
Confidence 67788888887421 224789999999999984 69999999999999987 99999999999999999999876
No 46
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=98.54 E-value=1.9e-07 Score=83.35 Aligned_cols=77 Identities=23% Similarity=0.302 Sum_probs=59.4
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEe-ccccccCCh---HHHHHHHHHhccCCcEEEEEec
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLS-ISSSHELPG---DQLLEEISRVLKPGGTILIYKK 91 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s-~~~l~~~~~---~~~L~ei~RvLKPGG~l~i~~~ 91 (271)
++.|++.++++..........++.++++++.++++ +++||+|++ ...+++++. ..+|++++|+|||||+|++..+
T Consensus 113 s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 191 (299)
T 3g2m_A 113 STSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL-DKRFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLA 191 (299)
T ss_dssp CHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC-SCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CHHHHHHHHHHHhhcccccccceEEEeCchhcCCc-CCCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEee
Confidence 67899999887421100000468999999999998 789999886 456777763 7899999999999999999886
Q ss_pred CC
Q 024162 92 LT 93 (271)
Q Consensus 92 ~~ 93 (271)
..
T Consensus 192 ~~ 193 (299)
T 3g2m_A 192 MS 193 (299)
T ss_dssp CC
T ss_pred cC
Confidence 54
No 47
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.54 E-value=1.6e-07 Score=81.44 Aligned_cols=84 Identities=21% Similarity=0.290 Sum_probs=60.9
Q ss_pred e-EEEeccCCCCC-CCC---CceeEEEeccccc----cCCh-HHHHHHHHHhccCCcEEEEEecCCCCc--------ccH
Q 024162 38 I-ITQASSLSQLP-VES---FSIDTVLSISSSH----ELPG-DQLLEEISRVLKPGGTILIYKKLTSDK--------GDV 99 (271)
Q Consensus 38 v-~~~~~d~e~lp-~~~---~sfD~V~s~~~l~----~~~~-~~~L~ei~RvLKPGG~l~i~~~~~~~~--------~e~ 99 (271)
+ .++++++.+.+ +++ ++||+|++..+++ ++.+ ..++++++|+|||||+|++.++..... ...
T Consensus 136 v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~ 215 (265)
T 2i62_A 136 IKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSSYYMIGEQKFSSL 215 (265)
T ss_dssp EEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEECC
T ss_pred heeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCceEEcCCcccccc
Confidence 6 88999998764 356 8999999999888 4444 889999999999999999987542110 000
Q ss_pred HHHHHHHHHHHHHcCCcchhhh
Q 024162 100 DKAISALEGKLLLAGFLDAQRI 121 (271)
Q Consensus 100 ~~~~~~l~~~l~laGF~~v~~~ 121 (271)
.-..+.+...+..+||..++..
T Consensus 216 ~~~~~~~~~~l~~aGf~~~~~~ 237 (265)
T 2i62_A 216 PLGWETVRDAVEEAGYTIEQFE 237 (265)
T ss_dssp CCCHHHHHHHHHHTTCEEEEEE
T ss_pred ccCHHHHHHHHHHCCCEEEEEE
Confidence 0012366777889999876543
No 48
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.54 E-value=1.1e-07 Score=80.44 Aligned_cols=79 Identities=23% Similarity=0.282 Sum_probs=63.0
Q ss_pred CeEEEeccCCCCCCCCCceeEEEeccccccCChHHHHHHHHHhccCCcEEEEEecCCCCcccHHHHHHHHHHHHHHcCCc
Q 024162 37 QIITQASSLSQLPVESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFL 116 (271)
Q Consensus 37 ~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~~~~L~ei~RvLKPGG~l~i~~~~~~~~~e~~~~~~~l~~~l~laGF~ 116 (271)
++.+.++++.++|+++++||+|++..++|+.....++++++|+|||||++++.++..... ....+...+..+||.
T Consensus 98 ~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~~gG~l~i~~~~~~~~-----~~~~~~~~l~~~Gf~ 172 (215)
T 2zfu_A 98 DPRVTVCDMAQVPLEDESVDVAVFCLSLMGTNIRDFLEEANRVLKPGGLLKVAEVSSRFE-----DVRTFLRAVTKLGFK 172 (215)
T ss_dssp STTEEESCTTSCSCCTTCEEEEEEESCCCSSCHHHHHHHHHHHEEEEEEEEEEECGGGCS-----CHHHHHHHHHHTTEE
T ss_pred CceEEEeccccCCCCCCCEeEEEEehhccccCHHHHHHHHHHhCCCCeEEEEEEcCCCCC-----CHHHHHHHHHHCCCE
Confidence 356788999999999999999999988886333899999999999999999998763211 123566778899998
Q ss_pred chhh
Q 024162 117 DAQR 120 (271)
Q Consensus 117 ~v~~ 120 (271)
.+..
T Consensus 173 ~~~~ 176 (215)
T 2zfu_A 173 IVSK 176 (215)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7654
No 49
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.53 E-value=5.3e-07 Score=83.27 Aligned_cols=103 Identities=13% Similarity=0.076 Sum_probs=73.8
Q ss_pred HHHHHHHHHhCchhhhcCCCCeEEEeccCCCC--CCCCCceeEEEeccccccCCh---HHHHHHHHHhccCCcEEEEEec
Q 024162 17 SAVLNAIRDLGDEAVEQCDPQIITQASSLSQL--PVESFSIDTVLSISSSHELPG---DQLLEEISRVLKPGGTILIYKK 91 (271)
Q Consensus 17 ~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~l--p~~~~sfD~V~s~~~l~~~~~---~~~L~ei~RvLKPGG~l~i~~~ 91 (271)
+.|++.++++.... ....++.++.+|+... |++ ++||+|++..++|++++ ..+|++++|+|||||+|++.+.
T Consensus 212 ~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~~~~p-~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (363)
T 3dp7_A 212 PQQLEMMRKQTAGL--SGSERIHGHGANLLDRDVPFP-TGFDAVWMSQFLDCFSEEEVISILTRVAQSIGKDSKVYIMET 288 (363)
T ss_dssp HHHHHHHHHHHTTC--TTGGGEEEEECCCCSSSCCCC-CCCSEEEEESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred HHHHHHHHHHHHhc--CcccceEEEEccccccCCCCC-CCcCEEEEechhhhCCHHHHHHHHHHHHHhcCCCcEEEEEee
Confidence 67888888874211 1114689999999875 566 78999999999999886 4789999999999999999986
Q ss_pred CCCCcccHH----------------------HHHHHHHHHHHHcCCcchhhhh
Q 024162 92 LTSDKGDVD----------------------KAISALEGKLLLAGFLDAQRIQ 122 (271)
Q Consensus 92 ~~~~~~e~~----------------------~~~~~l~~~l~laGF~~v~~~~ 122 (271)
......... ...+++...+..+||..++...
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~AGf~~v~~~~ 341 (363)
T 3dp7_A 289 LWDRQRYETASYCLTQISLYFTAMANGNSKMFHSDDLIRCIENAGLEVEEIQD 341 (363)
T ss_dssp CTTSCSSHHHHHHHHHHHHHHHHSSCSSCCSCCHHHHHHHHHTTTEEESCCCC
T ss_pred ccCCccccchhhHHHHhhhhHHhhhCCCCcccCHHHHHHHHHHcCCeEEEEEe
Confidence 532111000 0123555667888888776653
No 50
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=98.52 E-value=2.1e-07 Score=78.02 Aligned_cols=74 Identities=23% Similarity=0.327 Sum_probs=61.7
Q ss_pred cHHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCC--h-HHHHHHHHHhccCCcEEEEEec
Q 024162 15 PVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELP--G-DQLLEEISRVLKPGGTILIYKK 91 (271)
Q Consensus 15 ~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~--~-~~~L~ei~RvLKPGG~l~i~~~ 91 (271)
.++.|++.++++.... +.++.++++++.++++++++||+|++..+++|++ + ..++++++|+|||||++++.++
T Consensus 54 ~s~~~~~~a~~~~~~~----~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 129 (209)
T 2p8j_A 54 ISDLQLKKAENFSREN----NFKLNISKGDIRKLPFKDESMSFVYSYGTIFHMRKNDVKEAIDEIKRVLKPGGLACINFL 129 (209)
T ss_dssp CCHHHHHHHHHHHHHH----TCCCCEEECCTTSCCSCTTCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHhc----CCceEEEECchhhCCCCCCceeEEEEcChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 3678888888774221 2467889999999999999999999998888884 3 8899999999999999999886
Q ss_pred C
Q 024162 92 L 92 (271)
Q Consensus 92 ~ 92 (271)
.
T Consensus 130 ~ 130 (209)
T 2p8j_A 130 T 130 (209)
T ss_dssp E
T ss_pred c
Confidence 5
No 51
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=98.51 E-value=1.4e-07 Score=80.99 Aligned_cols=102 Identities=13% Similarity=0.125 Sum_probs=74.7
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCC--h-HHHHHHHHHhccCCcEEEEEecC
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELP--G-DQLLEEISRVLKPGGTILIYKKL 92 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~--~-~~~L~ei~RvLKPGG~l~i~~~~ 92 (271)
++.|++.++++.... ....++.++++++.+++ ++.+||+|++..++++++ + ..++++++|+|||||+|++..+.
T Consensus 97 s~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 173 (235)
T 3lcc_A 97 SESALAKANETYGSS--PKAEYFSFVKEDVFTWR-PTELFDLIFDYVFFCAIEPEMRPAWAKSMYELLKPDGELITLMYP 173 (235)
T ss_dssp CHHHHHHHHHHHTTS--GGGGGEEEECCCTTTCC-CSSCEEEEEEESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred CHHHHHHHHHHhhcc--CCCcceEEEECchhcCC-CCCCeeEEEEChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEec
Confidence 678888888874221 11246899999999987 456999999999999997 4 88999999999999999998875
Q ss_pred CCCc--c-cHHHHHHHHHHHHHHcCCcchhh
Q 024162 93 TSDK--G-DVDKAISALEGKLLLAGFLDAQR 120 (271)
Q Consensus 93 ~~~~--~-e~~~~~~~l~~~l~laGF~~v~~ 120 (271)
.... . ......+.+...+..+||..+..
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 204 (235)
T 3lcc_A 174 ITDHVGGPPYKVDVSTFEEVLVPIGFKAVSV 204 (235)
T ss_dssp CSCCCSCSSCCCCHHHHHHHHGGGTEEEEEE
T ss_pred ccccCCCCCccCCHHHHHHHHHHcCCeEEEE
Confidence 4211 0 00011236667788899987654
No 52
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=98.51 E-value=6.2e-08 Score=85.03 Aligned_cols=82 Identities=18% Similarity=0.185 Sum_probs=64.0
Q ss_pred CeEEEeccCCCCCCCCCceeEEEeccccccCCh-HHHHHHHHHhccCCcEEEEEecCCCC-----ccc-HH---H-----
Q 024162 37 QIITQASSLSQLPVESFSIDTVLSISSSHELPG-DQLLEEISRVLKPGGTILIYKKLTSD-----KGD-VD---K----- 101 (271)
Q Consensus 37 ~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~-~~~L~ei~RvLKPGG~l~i~~~~~~~-----~~e-~~---~----- 101 (271)
++.+++++++++|+++++||+|++..+++|+.+ ..++++++|+|| ||++++.++.... ... .. .
T Consensus 77 ~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk-gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (261)
T 3ege_A 77 QVEWFTGYAENLALPDKSVDGVISILAIHHFSHLEKSFQEMQRIIR-DGTIVLLTFDIRLAQRIWLYDYFPFLWEDALRF 155 (261)
T ss_dssp TEEEECCCTTSCCSCTTCBSEEEEESCGGGCSSHHHHHHHHHHHBC-SSCEEEEEECGGGCCCCGGGGTCHHHHHHHHTS
T ss_pred CCEEEECchhhCCCCCCCEeEEEEcchHhhccCHHHHHHHHHHHhC-CcEEEEEEcCCchhHHHHHHHHHHHHhhhhhhh
Confidence 689999999999999999999999999999987 999999999999 9999998876321 000 00 0
Q ss_pred --HHHHHHHHHHHcCCcchhh
Q 024162 102 --AISALEGKLLLAGFLDAQR 120 (271)
Q Consensus 102 --~~~~l~~~l~laGF~~v~~ 120 (271)
....+. .+..+||..++.
T Consensus 156 ~~~~~~~~-~l~~aGF~~v~~ 175 (261)
T 3ege_A 156 LPLDEQIN-LLQENTKRRVEA 175 (261)
T ss_dssp CCHHHHHH-HHHHHHCSEEEE
T ss_pred CCCHHHHH-HHHHcCCCceeE
Confidence 123455 778888876654
No 53
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=98.50 E-value=3.4e-07 Score=78.13 Aligned_cols=68 Identities=18% Similarity=0.256 Sum_probs=56.2
Q ss_pred cHHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEe-ccccccCC---h-HHHHHHHHHhccCCcEEEEE
Q 024162 15 PVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLS-ISSSHELP---G-DQLLEEISRVLKPGGTILIY 89 (271)
Q Consensus 15 ~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s-~~~l~~~~---~-~~~L~ei~RvLKPGG~l~i~ 89 (271)
.++.|++.++++. .++.++++++.++++ +++||+|++ ..+++|++ + ..+|++++++|||||+|++.
T Consensus 70 ~s~~~~~~a~~~~--------~~~~~~~~d~~~~~~-~~~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (239)
T 3bxo_A 70 LSEDMLTHARKRL--------PDATLHQGDMRDFRL-GRKFSAVVSMFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVE 140 (239)
T ss_dssp SCHHHHHHHHHHC--------TTCEEEECCTTTCCC-SSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred CCHHHHHHHHHhC--------CCCEEEECCHHHccc-CCCCcEEEEcCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 3678888888775 357889999999888 789999996 44788874 2 78999999999999999998
Q ss_pred ec
Q 024162 90 KK 91 (271)
Q Consensus 90 ~~ 91 (271)
++
T Consensus 141 ~~ 142 (239)
T 3bxo_A 141 PW 142 (239)
T ss_dssp CC
T ss_pred ec
Confidence 64
No 54
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=98.50 E-value=2.3e-07 Score=81.95 Aligned_cols=76 Identities=12% Similarity=0.065 Sum_probs=59.2
Q ss_pred cHHHHHHHHHHhCch--------hhh------cCCCCeEEEeccCCCCCCCC-CceeEEEeccccccCCh---HHHHHHH
Q 024162 15 PVSAVLNAIRDLGDE--------AVE------QCDPQIITQASSLSQLPVES-FSIDTVLSISSSHELPG---DQLLEEI 76 (271)
Q Consensus 15 ~s~~mv~~ar~~~~~--------~~~------~~~~~v~~~~~d~e~lp~~~-~sfD~V~s~~~l~~~~~---~~~L~ei 76 (271)
.|+.|++.++++... ... ....+|.|+++|+.++++.+ ++||+|++..++++++. ..+++++
T Consensus 98 ~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~ 177 (252)
T 2gb4_A 98 ISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDLPRANIGKFDRIWDRGALVAINPGDHDRYADII 177 (252)
T ss_dssp SCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTGGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHH
T ss_pred CCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccCCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHH
Confidence 378888988876421 000 12357999999999999875 89999999888888864 6799999
Q ss_pred HHhccCCcEEEEEe
Q 024162 77 SRVLKPGGTILIYK 90 (271)
Q Consensus 77 ~RvLKPGG~l~i~~ 90 (271)
+|+|||||+|++.+
T Consensus 178 ~~~LkpGG~l~l~~ 191 (252)
T 2gb4_A 178 LSLLRKEFQYLVAV 191 (252)
T ss_dssp HHTEEEEEEEEEEE
T ss_pred HHHcCCCeEEEEEE
Confidence 99999999997554
No 55
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.49 E-value=1.5e-07 Score=81.79 Aligned_cols=101 Identities=19% Similarity=0.229 Sum_probs=68.7
Q ss_pred cHHHHHHHHHHhCchhhhcCCCCeEEEeccCCCC--CCCCCceeEEEe-----ccccccCCh-HHHHHHHHHhccCCcEE
Q 024162 15 PVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQL--PVESFSIDTVLS-----ISSSHELPG-DQLLEEISRVLKPGGTI 86 (271)
Q Consensus 15 ~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~l--p~~~~sfD~V~s-----~~~l~~~~~-~~~L~ei~RvLKPGG~l 86 (271)
.++.|++.||++... ...++.++.++++.+ ++++++||.|+. ...++++++ ..++++++|+|||||+|
T Consensus 91 ~~~~~~~~a~~~~~~----~~~~~~~~~~~a~~~~~~~~~~~FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l 166 (236)
T 3orh_A 91 CNDGVFQRLRDWAPR----QTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVL 166 (236)
T ss_dssp CCHHHHHHHHHHGGG----CSSEEEEEESCHHHHGGGSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEE
T ss_pred CCHHHHHHHHHHHhh----CCCceEEEeehHHhhcccccccCCceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEE
Confidence 468899999987532 235677888887644 688999999974 334455556 88999999999999999
Q ss_pred EEEecCC------CCcccHHHH-HHHHHHHHHHcCCcchh
Q 024162 87 LIYKKLT------SDKGDVDKA-ISALEGKLLLAGFLDAQ 119 (271)
Q Consensus 87 ~i~~~~~------~~~~e~~~~-~~~l~~~l~laGF~~v~ 119 (271)
++.+... ......... .+.....|..+||....
T Consensus 167 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~eaGF~~~~ 206 (236)
T 3orh_A 167 TYCNLTSWGELMKSKYSDITIMFEETQVPALLEAGFRREN 206 (236)
T ss_dssp EECCHHHHHHHTTTTCSCHHHHHHHHTHHHHHHHTCCGGG
T ss_pred EEEecCCchhhhhhhhhhhhhhhHHHHHHHHHHcCCeEEE
Confidence 9865321 011112221 22445668889998654
No 56
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=98.48 E-value=3.3e-07 Score=77.45 Aligned_cols=72 Identities=13% Similarity=0.165 Sum_probs=61.3
Q ss_pred cHHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCCh----HHHHHHHHHhccCCcEEEEEe
Q 024162 15 PVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPG----DQLLEEISRVLKPGGTILIYK 90 (271)
Q Consensus 15 ~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~----~~~L~ei~RvLKPGG~l~i~~ 90 (271)
.++.|++.++++... ..++.++++++.+++ ++++||+|++..+++|+++ ..++++++|+|||||.|++.+
T Consensus 81 ~s~~~~~~a~~~~~~-----~~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 154 (216)
T 3ofk_A 81 VMPRAIGRACQRTKR-----WSHISWAATDILQFS-TAELFDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGS 154 (216)
T ss_dssp SCHHHHHHHHHHTTT-----CSSEEEEECCTTTCC-CSCCEEEEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCHHHHHHHHHhccc-----CCCeEEEEcchhhCC-CCCCccEEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 367899999988532 247899999999998 6889999999999999985 467999999999999999987
Q ss_pred cC
Q 024162 91 KL 92 (271)
Q Consensus 91 ~~ 92 (271)
..
T Consensus 155 ~~ 156 (216)
T 3ofk_A 155 AR 156 (216)
T ss_dssp EC
T ss_pred cC
Confidence 54
No 57
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.47 E-value=5.9e-07 Score=82.87 Aligned_cols=117 Identities=24% Similarity=0.256 Sum_probs=81.9
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCCh---HHHHHHHHHhccCCcEEEEEecC
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPG---DQLLEEISRVLKPGGTILIYKKL 92 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~---~~~L~ei~RvLKPGG~l~i~~~~ 92 (271)
.+.|++.++++... ....+|.++.+|+...|++ .+|+|+...++|.|++ ..+|++++++|+|||+|+|.+..
T Consensus 211 lp~v~~~a~~~~~~---~~~~rv~~~~gD~~~~~~~--~~D~~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~ 285 (353)
T 4a6d_A 211 IPEVVWTAKQHFSF---QEEEQIDFQEGDFFKDPLP--EADLYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESL 285 (353)
T ss_dssp CHHHHHHHHHHSCC-----CCSEEEEESCTTTSCCC--CCSEEEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECC
T ss_pred CHHHHHHHHHhhhh---cccCceeeecCccccCCCC--CceEEEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEee
Confidence 46788899887522 2236799999999776655 4799999999999987 57899999999999999999864
Q ss_pred CCC--cccHHH----------------HHHHHHHHHHHcCCcchhhhhhccccCcceeEEEEEeeCCCc
Q 024162 93 TSD--KGDVDK----------------AISALEGKLLLAGFLDAQRIQLKSVVPAEVVSFGVKGKKPTW 143 (271)
Q Consensus 93 ~~~--~~e~~~----------------~~~~l~~~l~laGF~~v~~~~~~~~~~~~~~~~~i~a~KPs~ 143 (271)
... ...... +.+++...+..+||..++..... +. .-.|.|+|.+.
T Consensus 286 ~~~~~~~~~~~~~~dl~ml~~~~g~ert~~e~~~ll~~AGf~~v~v~~~~-----~~-~~~i~ArKgt~ 348 (353)
T 4a6d_A 286 LDEDRRGPLLTQLYSLNMLVQTEGQERTPTHYHMLLSSAGFRDFQFKKTG-----AI-YDAILARKGTH 348 (353)
T ss_dssp CCTTSCCCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTCEEEEEECCS-----SS-CEEEEEECCCC
T ss_pred eCCCCCCCHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHCCCceEEEEEcC-----Cc-eEEEEEEecCc
Confidence 321 111110 12355677889999988765432 12 22477888654
No 58
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=98.45 E-value=7e-07 Score=76.40 Aligned_cols=71 Identities=17% Similarity=0.261 Sum_probs=57.0
Q ss_pred cHHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEecc-ccccCC---h-HHHHHHHHHhccCCcEEEEE
Q 024162 15 PVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSIS-SSHELP---G-DQLLEEISRVLKPGGTILIY 89 (271)
Q Consensus 15 ~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~-~l~~~~---~-~~~L~ei~RvLKPGG~l~i~ 89 (271)
.++.|++.++++... .+.++.++++++.+++++ ++||+|++.. +++|+. + ..++++++|+|||||+|++.
T Consensus 62 ~s~~~~~~a~~~~~~----~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 136 (243)
T 3d2l_A 62 LSEEMLEIAQEKAME----TNRHVDFWVQDMRELELP-EPVDAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFD 136 (243)
T ss_dssp SCHHHHHHHHHHHHH----TTCCCEEEECCGGGCCCS-SCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCHHHHHHHHHhhhh----cCCceEEEEcChhhcCCC-CCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 367888888887421 125688999999998886 8999999976 788873 2 77999999999999999985
Q ss_pred e
Q 024162 90 K 90 (271)
Q Consensus 90 ~ 90 (271)
.
T Consensus 137 ~ 137 (243)
T 3d2l_A 137 V 137 (243)
T ss_dssp E
T ss_pred c
Confidence 3
No 59
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=98.44 E-value=2.6e-07 Score=82.55 Aligned_cols=75 Identities=13% Similarity=0.185 Sum_probs=61.3
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCC------CceeEEEeccccccCChHHHHHHHHHhccCCcEEEEE
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVES------FSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIY 89 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~------~sfD~V~s~~~l~~~~~~~~L~ei~RvLKPGG~l~i~ 89 (271)
++.|++.++++.... .....++.+++++++++++++ ++||+|++..++||+....++++++|+|||||+|++.
T Consensus 70 s~~~~~~a~~~~~~~-~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~i~ 148 (299)
T 3g5t_A 70 SATMIKTAEVIKEGS-PDTYKNVSFKISSSDDFKFLGADSVDKQKIDMITAVECAHWFDFEKFQRSAYANLRKDGTIAIW 148 (299)
T ss_dssp CHHHHHHHHHHHHHC-C-CCTTEEEEECCTTCCGGGCTTTTTSSCEEEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred CHHHHHHHHHHHHhc-cCCCCceEEEEcCHHhCCccccccccCCCeeEEeHhhHHHHhCHHHHHHHHHHhcCCCcEEEEE
Confidence 678888888874211 012367999999999999888 8999999999999993399999999999999999995
Q ss_pred ec
Q 024162 90 KK 91 (271)
Q Consensus 90 ~~ 91 (271)
.+
T Consensus 149 ~~ 150 (299)
T 3g5t_A 149 GY 150 (299)
T ss_dssp EE
T ss_pred ec
Confidence 44
No 60
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=98.44 E-value=4.7e-07 Score=80.04 Aligned_cols=74 Identities=15% Similarity=0.165 Sum_probs=59.2
Q ss_pred cHHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCC--h-HHHHHHHHHhccCCcEEEEEec
Q 024162 15 PVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELP--G-DQLLEEISRVLKPGGTILIYKK 91 (271)
Q Consensus 15 ~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~--~-~~~L~ei~RvLKPGG~l~i~~~ 91 (271)
.++.|++.++++.... ....++.++.+++..+| ++||+|++..+++|++ + ..++++++|+|||||+|++.++
T Consensus 95 ~s~~~~~~a~~~~~~~--~~~~~~~~~~~d~~~~~---~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 169 (287)
T 1kpg_A 95 LSKNQANHVQQLVANS--ENLRSKRVLLAGWEQFD---EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTI 169 (287)
T ss_dssp SCHHHHHHHHHHHHTC--CCCSCEEEEESCGGGCC---CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred CCHHHHHHHHHHHHhc--CCCCCeEEEECChhhCC---CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 3678888888774211 12246889999998776 7999999999999984 4 8899999999999999999886
Q ss_pred CC
Q 024162 92 LT 93 (271)
Q Consensus 92 ~~ 93 (271)
..
T Consensus 170 ~~ 171 (287)
T 1kpg_A 170 TG 171 (287)
T ss_dssp EE
T ss_pred cC
Confidence 53
No 61
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=98.42 E-value=4.8e-07 Score=74.93 Aligned_cols=72 Identities=21% Similarity=0.228 Sum_probs=58.6
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCC--h-HHHHHHHHHhccCCcEEEEEec
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELP--G-DQLLEEISRVLKPGGTILIYKK 91 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~--~-~~~L~ei~RvLKPGG~l~i~~~ 91 (271)
++.|++.++++.... ...++.++.+++.++++ +++||+|++..++++++ + ..++++++|+|||||++++.++
T Consensus 63 s~~~~~~a~~~~~~~---~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 137 (199)
T 2xvm_A 63 NAMSIANVERIKSIE---NLDNLHTRVVDLNNLTF-DRQYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAA 137 (199)
T ss_dssp CHHHHHHHHHHHHHH---TCTTEEEEECCGGGCCC-CCCEEEEEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CHHHHHHHHHHHHhC---CCCCcEEEEcchhhCCC-CCCceEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEe
Confidence 567788887764211 11368999999999988 88999999999999987 4 8899999999999999888764
No 62
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.41 E-value=2.4e-07 Score=79.86 Aligned_cols=100 Identities=18% Similarity=0.213 Sum_probs=69.2
Q ss_pred cHHHHHHHHHHhCchhhhcCCCCeEEEeccCCCC--CCCCCceeEEEe-cccc--ccCC--h-HHHHHHHHHhccCCcEE
Q 024162 15 PVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQL--PVESFSIDTVLS-ISSS--HELP--G-DQLLEEISRVLKPGGTI 86 (271)
Q Consensus 15 ~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~l--p~~~~sfD~V~s-~~~l--~~~~--~-~~~L~ei~RvLKPGG~l 86 (271)
.++.|++.++++... ...++.+++++++++ ++++++||+|++ .+.+ +.++ . ..++++++|+|||||+|
T Consensus 91 ~s~~~l~~a~~~~~~----~~~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l 166 (236)
T 1zx0_A 91 CNDGVFQRLRDWAPR----QTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVL 166 (236)
T ss_dssp CCHHHHHHHHHHGGG----CSSEEEEEESCHHHHGGGSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEE
T ss_pred CCHHHHHHHHHHHHh----cCCCeEEEecCHHHhhcccCCCceEEEEECCcccchhhhhhhhHHHHHHHHHHhcCCCeEE
Confidence 478899999987532 225789999999988 899999999999 4442 2222 2 47799999999999999
Q ss_pred EEEecCCC------CcccHHHHH-HHHHHHHHHcCCcch
Q 024162 87 LIYKKLTS------DKGDVDKAI-SALEGKLLLAGFLDA 118 (271)
Q Consensus 87 ~i~~~~~~------~~~e~~~~~-~~l~~~l~laGF~~v 118 (271)
++.+.... ....+...+ +.....+..+||...
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~ 205 (236)
T 1zx0_A 167 TYCNLTSWGELMKSKYSDITIMFEETQVPALLEAGFRRE 205 (236)
T ss_dssp EECCHHHHHHHTTTTCSCHHHHHHHHTHHHHHHTTCCGG
T ss_pred EEEecCcHHHhhchhhhhhhhhccHHHHHHHHHCCCCCC
Confidence 98764310 011122211 233456888999853
No 63
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.41 E-value=7.9e-07 Score=75.03 Aligned_cols=67 Identities=15% Similarity=0.117 Sum_probs=56.3
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCC--CCCCCCceeEEEeccccccCCh-HHHHHHHHHhccCCcEEEEEecC
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQ--LPVESFSIDTVLSISSSHELPG-DQLLEEISRVLKPGGTILIYKKL 92 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~--lp~~~~sfD~V~s~~~l~~~~~-~~~L~ei~RvLKPGG~l~i~~~~ 92 (271)
++.|++.++++. ..+..+++.. +++++++||+|++..+++|+.+ ..++++++|+|||||++++..+.
T Consensus 63 ~~~~~~~~~~~~----------~~~~~~d~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 132 (230)
T 3cc8_A 63 FPEAAEQAKEKL----------DHVVLGDIETMDMPYEEEQFDCVIFGDVLEHLFDPWAVIEKVKPYIKQNGVILASIPN 132 (230)
T ss_dssp SHHHHHHHHTTS----------SEEEESCTTTCCCCSCTTCEEEEEEESCGGGSSCHHHHHHHTGGGEEEEEEEEEEEEC
T ss_pred CHHHHHHHHHhC----------CcEEEcchhhcCCCCCCCccCEEEECChhhhcCCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 567777777654 1567788876 6788899999999999999877 89999999999999999998765
No 64
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.40 E-value=5.5e-07 Score=81.32 Aligned_cols=101 Identities=20% Similarity=0.213 Sum_probs=71.9
Q ss_pred HHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCCh---HHHHHHHHHhccCCcEEEEEecCCC
Q 024162 18 AVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPG---DQLLEEISRVLKPGGTILIYKKLTS 94 (271)
Q Consensus 18 ~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~---~~~L~ei~RvLKPGG~l~i~~~~~~ 94 (271)
.|++.++++.... ....++.++.+++.+.+++.+ ||+|++..++|++++ ..+|++++++|||||++++.++...
T Consensus 199 ~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~~~~~-~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 275 (335)
T 2r3s_A 199 SVLEVAKENARIQ--GVASRYHTIAGSAFEVDYGND-YDLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPN 275 (335)
T ss_dssp HHHHHHHHHHHHH--TCGGGEEEEESCTTTSCCCSC-EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHhc--CCCcceEEEecccccCCCCCC-CcEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCC
Confidence 7888888763211 112358999999988887665 999999999999965 6899999999999999999987543
Q ss_pred Cc--cc-HHH----------------HHHHHHHHHHHcCCcchhhh
Q 024162 95 DK--GD-VDK----------------AISALEGKLLLAGFLDAQRI 121 (271)
Q Consensus 95 ~~--~e-~~~----------------~~~~l~~~l~laGF~~v~~~ 121 (271)
.. .. ... ..+++...+..+||..++..
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGf~~~~~~ 321 (335)
T 2r3s_A 276 SDRITPPDAAAFSLVMLATTPNGDAYTFAEYESMFSNAGFSHSQLH 321 (335)
T ss_dssp TTSSCSHHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHTTCSEEEEE
T ss_pred CCcCCchHHHHHHHHHHeeCCCCCcCCHHHHHHHHHHCCCCeeeEE
Confidence 11 00 000 12355566788888876654
No 65
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.39 E-value=2.5e-07 Score=82.23 Aligned_cols=84 Identities=20% Similarity=0.319 Sum_probs=59.7
Q ss_pred eEEEeccCCC-CCC-----CCCceeEEEecccccc----CCh-HHHHHHHHHhccCCcEEEEEecCCCCc---c-----c
Q 024162 38 IITQASSLSQ-LPV-----ESFSIDTVLSISSSHE----LPG-DQLLEEISRVLKPGGTILIYKKLTSDK---G-----D 98 (271)
Q Consensus 38 v~~~~~d~e~-lp~-----~~~sfD~V~s~~~l~~----~~~-~~~L~ei~RvLKPGG~l~i~~~~~~~~---~-----e 98 (271)
+.++++|+.. +|+ ++++||+|+++.+++| +.+ ..+|++++|+|||||+|++........ . .
T Consensus 152 ~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~~~~~~~~~~~~ 231 (289)
T 2g72_A 152 KRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESWYLAGEARLTV 231 (289)
T ss_dssp EEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEESCCEEEETTEEEEC
T ss_pred ceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecCcceEEcCCeeeee
Confidence 4567778887 664 4567999999999998 545 889999999999999999975332110 0 0
Q ss_pred HHHHHHHHHHHHHHcCCcchhhh
Q 024162 99 VDKAISALEGKLLLAGFLDAQRI 121 (271)
Q Consensus 99 ~~~~~~~l~~~l~laGF~~v~~~ 121 (271)
..-..+.+...+..+||..+...
T Consensus 232 ~~~~~~~l~~~l~~aGf~~~~~~ 254 (289)
T 2g72_A 232 VPVSEEEVREALVRSGYKVRDLR 254 (289)
T ss_dssp CCCCHHHHHHHHHHTTEEEEEEE
T ss_pred ccCCHHHHHHHHHHcCCeEEEee
Confidence 00012366777889999876543
No 66
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=98.38 E-value=4.9e-07 Score=75.65 Aligned_cols=73 Identities=32% Similarity=0.400 Sum_probs=60.4
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCC---------------h-HHHHHHHHHh
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELP---------------G-DQLLEEISRV 79 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~---------------~-~~~L~ei~Rv 79 (271)
++.|++.++++... ..++.++++++..+++++++||+|++..+++++. + ..++++++|+
T Consensus 74 s~~~~~~a~~~~~~-----~~~i~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 148 (215)
T 2pxx_A 74 SSVVVAAMQACYAH-----VPQLRWETMDVRKLDFPSASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRV 148 (215)
T ss_dssp CHHHHHHHHHHTTT-----CTTCEEEECCTTSCCSCSSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhccc-----CCCcEEEEcchhcCCCCCCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHh
Confidence 67888888887532 2568899999999999999999999977665443 3 7899999999
Q ss_pred ccCCcEEEEEecCC
Q 024162 80 LKPGGTILIYKKLT 93 (271)
Q Consensus 80 LKPGG~l~i~~~~~ 93 (271)
|||||++++.++..
T Consensus 149 LkpgG~li~~~~~~ 162 (215)
T 2pxx_A 149 LVPGGRFISMTSAA 162 (215)
T ss_dssp EEEEEEEEEEESCC
T ss_pred CcCCCEEEEEeCCC
Confidence 99999999999863
No 67
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=98.36 E-value=1e-06 Score=79.23 Aligned_cols=74 Identities=7% Similarity=0.129 Sum_probs=59.6
Q ss_pred cHHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCC--h-HHHHHHHHHhccCCcEEEEEec
Q 024162 15 PVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELP--G-DQLLEEISRVLKPGGTILIYKK 91 (271)
Q Consensus 15 ~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~--~-~~~L~ei~RvLKPGG~l~i~~~ 91 (271)
.++.|++.++++.... ....++.++.+++.++| ++||+|++..++++++ + ..++++++|+|||||+|++.++
T Consensus 121 ~s~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~---~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 195 (318)
T 2fk8_A 121 LSKNQHARCEQVLASI--DTNRSRQVLLQGWEDFA---EPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSS 195 (318)
T ss_dssp SCHHHHHHHHHHHHTS--CCSSCEEEEESCGGGCC---CCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred CCHHHHHHHHHHHHhc--CCCCceEEEECChHHCC---CCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 3678888888874211 11245889999998875 7899999999999994 4 8899999999999999999987
Q ss_pred CC
Q 024162 92 LT 93 (271)
Q Consensus 92 ~~ 93 (271)
..
T Consensus 196 ~~ 197 (318)
T 2fk8_A 196 VS 197 (318)
T ss_dssp EC
T ss_pred cc
Confidence 64
No 68
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.35 E-value=8.2e-07 Score=80.58 Aligned_cols=101 Identities=13% Similarity=0.141 Sum_probs=71.5
Q ss_pred HHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCCh---HHHHHHHHHhccCCcEEEEEecCC
Q 024162 17 SAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPG---DQLLEEISRVLKPGGTILIYKKLT 93 (271)
Q Consensus 17 ~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~---~~~L~ei~RvLKPGG~l~i~~~~~ 93 (271)
+.|++.++++.... ....+|.++.+|+. .+++. +||+|++.+++|++++ ..+|++++|+|||||+|++.+...
T Consensus 202 ~~~~~~a~~~~~~~--~~~~~v~~~~~d~~-~~~p~-~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~ 277 (332)
T 3i53_A 202 QGPASAAHRRFLDT--GLSGRAQVVVGSFF-DPLPA-GAGGYVLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVA 277 (332)
T ss_dssp HHHHHHHHHHHHHT--TCTTTEEEEECCTT-SCCCC-SCSEEEEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCC
T ss_pred HHHHHHHHHhhhhc--CcCcCeEEecCCCC-CCCCC-CCcEEEEehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecC
Confidence 67888888764211 12256999999996 45655 8999999999999987 689999999999999999998753
Q ss_pred CCcc-----cHH---------HHHHHHHHHHHHcCCcchhhh
Q 024162 94 SDKG-----DVD---------KAISALEGKLLLAGFLDAQRI 121 (271)
Q Consensus 94 ~~~~-----e~~---------~~~~~l~~~l~laGF~~v~~~ 121 (271)
.... ++. ...+++...+..+||..++..
T Consensus 278 ~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~ 319 (332)
T 3i53_A 278 GDEHAGTGMDLRMLTYFGGKERSLAELGELAAQAGLAVRAAH 319 (332)
T ss_dssp C---CCHHHHHHHHHHHSCCCCCHHHHHHHHHHTTEEEEEEE
T ss_pred CCCCccHHHHHHHHhhCCCCCCCHHHHHHHHHHCCCEEEEEE
Confidence 2110 000 012345566778888876554
No 69
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.35 E-value=2e-06 Score=78.45 Aligned_cols=115 Identities=17% Similarity=0.173 Sum_probs=78.0
Q ss_pred HHHHHHHHhCchhhhcCCCCeEEEeccCCCCC-CCCCceeEEEeccccccCCh---HHHHHHHHHhccCCcEEEEEecCC
Q 024162 18 AVLNAIRDLGDEAVEQCDPQIITQASSLSQLP-VESFSIDTVLSISSSHELPG---DQLLEEISRVLKPGGTILIYKKLT 93 (271)
Q Consensus 18 ~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp-~~~~sfD~V~s~~~l~~~~~---~~~L~ei~RvLKPGG~l~i~~~~~ 93 (271)
.|++.++++.... ....++.++.+|+...+ +....||+|++..++|++++ ..+|++++++|||||+|++.+...
T Consensus 213 ~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~ 290 (352)
T 3mcz_A 213 TTRDAARKTIHAH--DLGGRVEFFEKNLLDARNFEGGAADVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMTM 290 (352)
T ss_dssp GGHHHHHHHHHHT--TCGGGEEEEECCTTCGGGGTTCCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHhc--CCCCceEEEeCCcccCcccCCCCccEEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 4666777653211 11236899999998876 23556999999999999986 689999999999999999998643
Q ss_pred CCc--ccHH-----------------HHHHHHHHHHHHcCCcchhhhhhccccCcceeEEEEEeeCCC
Q 024162 94 SDK--GDVD-----------------KAISALEGKLLLAGFLDAQRIQLKSVVPAEVVSFGVKGKKPT 142 (271)
Q Consensus 94 ~~~--~e~~-----------------~~~~~l~~~l~laGF~~v~~~~~~~~~~~~~~~~~i~a~KPs 142 (271)
... .... ...+++...+..+||..++... . ....+.++||+
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~-g-------~~~l~~a~kp~ 350 (352)
T 3mcz_A 291 NDDRVTPALSADFSLHMMVNTNHGELHPTPWIAGVVRDAGLAVGERSI-G-------RYTLLIGQRSS 350 (352)
T ss_dssp CTTSSSSHHHHHHHHHHHHHSTTCCCCCHHHHHHHHHHTTCEEEEEEE-T-------TEEEEEEECCC
T ss_pred CCCCCCCchHHHhhHHHHhhCCCCCcCCHHHHHHHHHHCCCceeeecc-C-------ceEEEEEecCC
Confidence 211 0000 0123456678889998876321 1 24567888885
No 70
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=98.32 E-value=1.9e-06 Score=76.92 Aligned_cols=74 Identities=9% Similarity=0.160 Sum_probs=59.6
Q ss_pred cHHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCCh----------HHHHHHHHHhccCCc
Q 024162 15 PVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPG----------DQLLEEISRVLKPGG 84 (271)
Q Consensus 15 ~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~----------~~~L~ei~RvLKPGG 84 (271)
.++.|++.++++.... ....++.++.+++.++ +++||+|++..+++|+++ ..++++++|+|||||
T Consensus 103 ~s~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~---~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG 177 (302)
T 3hem_A 103 LSENQYAHDKAMFDEV--DSPRRKEVRIQGWEEF---DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDG 177 (302)
T ss_dssp CCHHHHHHHHHHHHHS--CCSSCEEEEECCGGGC---CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTC
T ss_pred CCHHHHHHHHHHHHhc--CCCCceEEEECCHHHc---CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCc
Confidence 3678888888874221 1123689999999876 789999999999999843 699999999999999
Q ss_pred EEEEEecCC
Q 024162 85 TILIYKKLT 93 (271)
Q Consensus 85 ~l~i~~~~~ 93 (271)
+|++.++..
T Consensus 178 ~l~i~~~~~ 186 (302)
T 3hem_A 178 RMLLHTITI 186 (302)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEEec
Confidence 999998764
No 71
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=98.32 E-value=1.1e-06 Score=74.40 Aligned_cols=76 Identities=16% Similarity=0.055 Sum_probs=59.6
Q ss_pred HHHHHHHHHHhCch-hhh-cCCCCeEEEeccCCCCCCCCCceeEEEeccccccCCh---HHHHHHHHHhccCCcEEEEEe
Q 024162 16 VSAVLNAIRDLGDE-AVE-QCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPG---DQLLEEISRVLKPGGTILIYK 90 (271)
Q Consensus 16 s~~mv~~ar~~~~~-~~~-~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~---~~~L~ei~RvLKPGG~l~i~~ 90 (271)
++.|++.++++... +.. ....++.++++++..+++++++||+|++..+++++++ ..++++++|+|||||.+++..
T Consensus 62 s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~ 141 (219)
T 3jwg_A 62 SYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDKRFSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTP 141 (219)
T ss_dssp CHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCGGGTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred CHHHHHHHHHHHHhhccccccCcceEEEeCcccccccccCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEcc
Confidence 67888888887421 100 0012689999999999988899999999999999985 589999999999999776665
Q ss_pred c
Q 024162 91 K 91 (271)
Q Consensus 91 ~ 91 (271)
.
T Consensus 142 ~ 142 (219)
T 3jwg_A 142 N 142 (219)
T ss_dssp B
T ss_pred c
Confidence 4
No 72
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=98.29 E-value=6.3e-07 Score=81.15 Aligned_cols=78 Identities=10% Similarity=0.012 Sum_probs=57.3
Q ss_pred cHHHHHHHHHHhCchhhhc---CCCCeEEEeccC------CCC--CCCCCceeEEEeccccccC-C--h-HHHHHHHHHh
Q 024162 15 PVSAVLNAIRDLGDEAVEQ---CDPQIITQASSL------SQL--PVESFSIDTVLSISSSHEL-P--G-DQLLEEISRV 79 (271)
Q Consensus 15 ~s~~mv~~ar~~~~~~~~~---~~~~v~~~~~d~------e~l--p~~~~sfD~V~s~~~l~~~-~--~-~~~L~ei~Rv 79 (271)
.|+.|++.|+++....... ....+.|.++++ +++ ++++++||+|++.+++||+ . + ..+|++++|+
T Consensus 79 ~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~ 158 (302)
T 2vdw_A 79 PDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYFGKFNIIDWQFAIHYSFHPRHYATVMNNLSEL 158 (302)
T ss_dssp SCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCSSCEEEEEEESCGGGTCSTTTHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccccCCCeeEEEECchHHHhCCHHHHHHHHHHHHHH
Confidence 3888999999875321000 001366878877 433 3667899999999888875 2 2 8899999999
Q ss_pred ccCCcEEEEEecC
Q 024162 80 LKPGGTILIYKKL 92 (271)
Q Consensus 80 LKPGG~l~i~~~~ 92 (271)
|||||+|++.++.
T Consensus 159 LkpGG~~i~~~~~ 171 (302)
T 2vdw_A 159 TASGGKVLITTMD 171 (302)
T ss_dssp EEEEEEEEEEEEC
T ss_pred cCCCCEEEEEeCC
Confidence 9999999999875
No 73
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=98.29 E-value=1.7e-06 Score=73.30 Aligned_cols=76 Identities=11% Similarity=0.004 Sum_probs=59.8
Q ss_pred HHHHHHHHHHhCch-hhh-cCCCCeEEEeccCCCCCCCCCceeEEEeccccccCCh---HHHHHHHHHhccCCcEEEEEe
Q 024162 16 VSAVLNAIRDLGDE-AVE-QCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPG---DQLLEEISRVLKPGGTILIYK 90 (271)
Q Consensus 16 s~~mv~~ar~~~~~-~~~-~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~---~~~L~ei~RvLKPGG~l~i~~ 90 (271)
++.|++.++++... +.. ....++.++++++..++++.++||+|++..+++++++ ..++++++|+|||||.+++..
T Consensus 62 s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 141 (217)
T 3jwh_A 62 SYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDKRFHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTP 141 (217)
T ss_dssp CHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCGGGCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred CHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccccCCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 67888888887321 100 0012689999999888888899999999999999975 689999999999999887765
Q ss_pred c
Q 024162 91 K 91 (271)
Q Consensus 91 ~ 91 (271)
.
T Consensus 142 ~ 142 (217)
T 3jwh_A 142 N 142 (217)
T ss_dssp B
T ss_pred C
Confidence 4
No 74
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=98.29 E-value=1.2e-06 Score=73.56 Aligned_cols=113 Identities=12% Similarity=0.013 Sum_probs=73.3
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCChHHHHHHHHHhccCCcEEEEEecCCCC
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYKKLTSD 95 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~~~~L~ei~RvLKPGG~l~i~~~~~~~ 95 (271)
++.|++.++++.... ...++.+.++++... .+++||+|++...++++ ..++++++|+|||||++++.+....
T Consensus 92 s~~~~~~a~~~~~~~---~~~~v~~~~~d~~~~--~~~~fD~i~~~~~~~~~--~~~l~~~~~~L~~gG~l~~~~~~~~- 163 (205)
T 3grz_A 92 SDESMTAAEENAALN---GIYDIALQKTSLLAD--VDGKFDLIVANILAEIL--LDLIPQLDSHLNEDGQVIFSGIDYL- 163 (205)
T ss_dssp CHHHHHHHHHHHHHT---TCCCCEEEESSTTTT--CCSCEEEEEEESCHHHH--HHHGGGSGGGEEEEEEEEEEEEEGG-
T ss_pred CHHHHHHHHHHHHHc---CCCceEEEecccccc--CCCCceEEEECCcHHHH--HHHHHHHHHhcCCCCEEEEEecCcc-
Confidence 577888888774211 112388999988664 46899999998766543 6889999999999999999876531
Q ss_pred cccHHHHHHHHHHHHHHcCCcchhhhhhccccCcceeEEEEEeeCCCcccccc
Q 024162 96 KGDVDKAISALEGKLLLAGFLDAQRIQLKSVVPAEVVSFGVKGKKPTWKIGSS 148 (271)
Q Consensus 96 ~~e~~~~~~~l~~~l~laGF~~v~~~~~~~~~~~~~~~~~i~a~KPs~~~gss 148 (271)
. ...+...+..+||..+....... -...++.++|..+.+++
T Consensus 164 --~----~~~~~~~~~~~Gf~~~~~~~~~~------w~~~~~~~~~~~~~~~~ 204 (205)
T 3grz_A 164 --Q----LPKIEQALAENSFQIDLKMRAGR------WIGLAISRKHEGHHHHH 204 (205)
T ss_dssp --G----HHHHHHHHHHTTEEEEEEEEETT------EEEEEEEECC-------
T ss_pred --c----HHHHHHHHHHcCCceEEeeccCC------EEEEEEecccccccccC
Confidence 1 22566778889998876543211 12345666777666543
No 75
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.29 E-value=1.9e-06 Score=79.71 Aligned_cols=101 Identities=16% Similarity=0.229 Sum_probs=71.0
Q ss_pred HHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCChH---HHHHHHHHhccCCcEEEEEecCC
Q 024162 17 SAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPGD---QLLEEISRVLKPGGTILIYKKLT 93 (271)
Q Consensus 17 ~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~~---~~L~ei~RvLKPGG~l~i~~~~~ 93 (271)
+.|++.++++.... ....+|.++.+|+. .+++. .||+|++..++|+++++ .+|++++++|||||+|++.+...
T Consensus 235 ~~~~~~a~~~~~~~--~l~~~v~~~~~d~~-~~~p~-~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~ 310 (369)
T 3gwz_A 235 PPVAEEARELLTGR--GLADRCEILPGDFF-ETIPD-GADVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLI 310 (369)
T ss_dssp HHHHHHHHHHHHHT--TCTTTEEEEECCTT-TCCCS-SCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBC
T ss_pred HHHHHHHHHhhhhc--CcCCceEEeccCCC-CCCCC-CceEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 67788888764211 12356999999997 56666 89999999999999873 69999999999999999998654
Q ss_pred CCcccHHH----------------HHHHHHHHHHHcCCcchhhh
Q 024162 94 SDKGDVDK----------------AISALEGKLLLAGFLDAQRI 121 (271)
Q Consensus 94 ~~~~e~~~----------------~~~~l~~~l~laGF~~v~~~ 121 (271)
........ ..+++...+..+||..++..
T Consensus 311 ~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~~ 354 (369)
T 3gwz_A 311 DERPAASTLFVDLLLLVLVGGAERSESEFAALLEKSGLRVERSL 354 (369)
T ss_dssp CSSCCHHHHHHHHHHHHHHSCCCBCHHHHHHHHHTTTEEEEEEE
T ss_pred CCCCCCchhHhhHHHHhhcCCccCCHHHHHHHHHHCCCeEEEEE
Confidence 32111000 12344556677777766554
No 76
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.27 E-value=1.8e-06 Score=73.03 Aligned_cols=73 Identities=22% Similarity=0.345 Sum_probs=59.0
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEecccccc--CCh-HHHHHHHHHhccCCcEEEEEecC
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHE--LPG-DQLLEEISRVLKPGGTILIYKKL 92 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~--~~~-~~~L~ei~RvLKPGG~l~i~~~~ 92 (271)
++.|++.++++... ...++.++++++.++++++++||+|++..++++ ..+ ..++++++++|||||+|++.++.
T Consensus 69 s~~~~~~a~~~~~~----~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 69 SEDMIRKAREYAKS----RESNVEFIVGDARKLSFEDKTFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp CHHHHHHHHHHHHH----TTCCCEEEECCTTSCCSCTTCEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CHHHHHHHHHHHHh----cCCCceEEECchhcCCCCCCcEEEEEEcCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 57788888876421 125689999999999998899999999888443 334 78999999999999999998765
No 77
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.27 E-value=3.4e-06 Score=77.44 Aligned_cols=71 Identities=18% Similarity=0.262 Sum_probs=55.6
Q ss_pred HHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCCh---HHHHHHHHHhccCCcEEEEEec
Q 024162 17 SAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPG---DQLLEEISRVLKPGGTILIYKK 91 (271)
Q Consensus 17 ~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~---~~~L~ei~RvLKPGG~l~i~~~ 91 (271)
+.|++.++++.... ....++.++.+|+.+ +++. .||+|++..++|++++ ..+|++++|+|||||+|++.+.
T Consensus 215 ~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~-~~~~-~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 215 AGPAERARRRFADA--GLADRVTVAEGDFFK-PLPV-TADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp HHHHHHHHHHHHHT--TCTTTEEEEECCTTS-CCSC-CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHhc--CCCCceEEEeCCCCC-cCCC-CCCEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 57888888764211 112368999999865 4444 3999999999999987 3899999999999999999887
No 78
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=98.25 E-value=4e-06 Score=70.32 Aligned_cols=92 Identities=15% Similarity=0.089 Sum_probs=66.3
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCChHHHHHHHHHhccCCcEEEEEecCCCC
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYKKLTSD 95 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~~~~L~ei~RvLKPGG~l~i~~~~~~~ 95 (271)
++.|++.++++.... ...++.++.+++.+......+||+|++....+ ....++++++|+|||||+|++.....
T Consensus 73 s~~~~~~a~~~~~~~---~~~~v~~~~~d~~~~~~~~~~~D~i~~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~-- 145 (204)
T 3e05_A 73 NPQYLGFIRDNLKKF---VARNVTLVEAFAPEGLDDLPDPDRVFIGGSGG--MLEEIIDAVDRRLKSEGVIVLNAVTL-- 145 (204)
T ss_dssp CHHHHHHHHHHHHHH---TCTTEEEEECCTTTTCTTSCCCSEEEESCCTT--CHHHHHHHHHHHCCTTCEEEEEECBH--
T ss_pred CHHHHHHHHHHHHHh---CCCcEEEEeCChhhhhhcCCCCCEEEECCCCc--CHHHHHHHHHHhcCCCeEEEEEeccc--
Confidence 577788887764211 11468899999866544457899999977654 33789999999999999999987652
Q ss_pred cccHHHHHHHHHHHHHHcCCcchhh
Q 024162 96 KGDVDKAISALEGKLLLAGFLDAQR 120 (271)
Q Consensus 96 ~~e~~~~~~~l~~~l~laGF~~v~~ 120 (271)
.....+...+..+|| +++.
T Consensus 146 -----~~~~~~~~~l~~~g~-~~~~ 164 (204)
T 3e05_A 146 -----DTLTKAVEFLEDHGY-MVEV 164 (204)
T ss_dssp -----HHHHHHHHHHHHTTC-EEEE
T ss_pred -----ccHHHHHHHHHHCCC-ceeE
Confidence 123356677889999 5443
No 79
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=98.25 E-value=5.6e-06 Score=70.15 Aligned_cols=94 Identities=19% Similarity=0.031 Sum_probs=67.5
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCC--CCCCceeEEEeccccccCC---------hHHHHHHHHHhccCCc
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLP--VESFSIDTVLSISSSHELP---------GDQLLEEISRVLKPGG 84 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp--~~~~sfD~V~s~~~l~~~~---------~~~~L~ei~RvLKPGG 84 (271)
+..|++.++++.... ...++.++++++..++ +++++||+|++.+...|.. ...++.+++++|||||
T Consensus 74 s~~~l~~a~~~~~~~---~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG 150 (214)
T 1yzh_A 74 QKSVLSYALDKVLEV---GVPNIKLLWVDGSDLTDYFEDGEIDRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENG 150 (214)
T ss_dssp CHHHHHHHHHHHHHH---CCSSEEEEECCSSCGGGTSCTTCCSEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTC
T ss_pred CHHHHHHHHHHHHHc---CCCCEEEEeCCHHHHHhhcCCCCCCEEEEECCCCccccchhhhccCCHHHHHHHHHHcCCCc
Confidence 567777777764211 1247899999999887 8888999999987654432 1579999999999999
Q ss_pred EEEEEecCCCCcccHHHHHHHHHHHHHHcCCcchh
Q 024162 85 TILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQ 119 (271)
Q Consensus 85 ~l~i~~~~~~~~~e~~~~~~~l~~~l~laGF~~v~ 119 (271)
.|++..... . ....+...+..+||..+.
T Consensus 151 ~l~~~~~~~----~---~~~~~~~~~~~~g~~~~~ 178 (214)
T 1yzh_A 151 EIHFKTDNR----G---LFEYSLVSFSQYGMKLNG 178 (214)
T ss_dssp EEEEEESCH----H---HHHHHHHHHHHHTCEEEE
T ss_pred EEEEEeCCH----H---HHHHHHHHHHHCCCeeee
Confidence 999986431 1 123455567778887543
No 80
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.24 E-value=1.7e-06 Score=77.07 Aligned_cols=73 Identities=16% Similarity=0.240 Sum_probs=60.1
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCC-----------CCCCceeEEEeccccccCCh---HHHHHHHHHhcc
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLP-----------VESFSIDTVLSISSSHELPG---DQLLEEISRVLK 81 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp-----------~~~~sfD~V~s~~~l~~~~~---~~~L~ei~RvLK 81 (271)
++.|++.+|++... ..++.|+++|+.+.+ ++.++||+|++..++||+++ ..+|++++|+||
T Consensus 113 sp~~l~~Ar~~~~~-----~~~v~~~~~D~~~~~~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~ 187 (274)
T 2qe6_A 113 DPMVLTHGRALLAK-----DPNTAVFTADVRDPEYILNHPDVRRMIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALA 187 (274)
T ss_dssp SHHHHHHHHHHHTT-----CTTEEEEECCTTCHHHHHHSHHHHHHCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSC
T ss_pred ChHHHHHHHHhcCC-----CCCeEEEEeeCCCchhhhccchhhccCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCC
Confidence 58899999987521 256899999997531 33358999999999999975 789999999999
Q ss_pred CCcEEEEEecCC
Q 024162 82 PGGTILIYKKLT 93 (271)
Q Consensus 82 PGG~l~i~~~~~ 93 (271)
|||+|++.+...
T Consensus 188 pGG~l~i~~~~~ 199 (274)
T 2qe6_A 188 PGSYLFMTSLVD 199 (274)
T ss_dssp TTCEEEEEEEBC
T ss_pred CCcEEEEEEecC
Confidence 999999999775
No 81
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=98.24 E-value=1.5e-06 Score=76.66 Aligned_cols=76 Identities=18% Similarity=0.148 Sum_probs=60.3
Q ss_pred cHHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCC-CCCceeEEEecccccc--CC--h-HHHHHHHHHhccCCcEEEE
Q 024162 15 PVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPV-ESFSIDTVLSISSSHE--LP--G-DQLLEEISRVLKPGGTILI 88 (271)
Q Consensus 15 ~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~-~~~sfD~V~s~~~l~~--~~--~-~~~L~ei~RvLKPGG~l~i 88 (271)
.++.|++.++++.... ....++.++++++..+++ ++++||+|++..++|+ .+ + ..+|++++|+|||||+|++
T Consensus 95 ~s~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 172 (298)
T 1ri5_A 95 IAEVSINDARVRARNM--KRRFKVFFRAQDSYGRHMDLGKEFDVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIM 172 (298)
T ss_dssp SCHHHHHHHHHHHHTS--CCSSEEEEEESCTTTSCCCCSSCEEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHhc--CCCccEEEEECCccccccCCCCCcCEEEECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 3678888888774211 111358899999999998 6889999999988887 22 3 7899999999999999999
Q ss_pred EecC
Q 024162 89 YKKL 92 (271)
Q Consensus 89 ~~~~ 92 (271)
..+.
T Consensus 173 ~~~~ 176 (298)
T 1ri5_A 173 TVPS 176 (298)
T ss_dssp EEEC
T ss_pred EECC
Confidence 9865
No 82
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.23 E-value=1.8e-07 Score=87.54 Aligned_cols=101 Identities=14% Similarity=0.182 Sum_probs=72.9
Q ss_pred cHHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCCh-HHHHHHHHHhccCCcEEEEEecCC
Q 024162 15 PVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPG-DQLLEEISRVLKPGGTILIYKKLT 93 (271)
Q Consensus 15 ~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~-~~~L~ei~RvLKPGG~l~i~~~~~ 93 (271)
+++.|++.++++.... ....+...+++.+|+++++||+|++..+++|+++ ..+|++++|+|||||+|++..+..
T Consensus 137 ~s~~~~~~a~~~~~~~-----~~~~~~~~~~~~l~~~~~~fD~I~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~ 211 (416)
T 4e2x_A 137 PSSGVAAKAREKGIRV-----RTDFFEKATADDVRRTEGPANVIYAANTLCHIPYVQSVLEGVDALLAPDGVFVFEDPYL 211 (416)
T ss_dssp CCHHHHHHHHTTTCCE-----ECSCCSHHHHHHHHHHHCCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred CCHHHHHHHHHcCCCc-----ceeeechhhHhhcccCCCCEEEEEECChHHhcCCHHHHHHHHHHHcCCCeEEEEEeCCh
Confidence 4788999988873110 1112345666777888899999999999999987 999999999999999999987541
Q ss_pred C--------------CcccHHHHHHHHHHHHHHcCCcchhhhh
Q 024162 94 S--------------DKGDVDKAISALEGKLLLAGFLDAQRIQ 122 (271)
Q Consensus 94 ~--------------~~~e~~~~~~~l~~~l~laGF~~v~~~~ 122 (271)
. +..-. ....+...+..+||..++...
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~--s~~~l~~ll~~aGf~~~~~~~ 252 (416)
T 4e2x_A 212 GDIVAKTSFDQIFDEHFFLF--SATSVQGMAQRCGFELVDVQR 252 (416)
T ss_dssp HHHHHHTCGGGCSTTCCEEC--CHHHHHHHHHHTTEEEEEEEE
T ss_pred HHhhhhcchhhhhhhhhhcC--CHHHHHHHHHHcCCEEEEEEE
Confidence 0 00000 123667788999998765543
No 83
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=98.23 E-value=3.6e-06 Score=70.21 Aligned_cols=74 Identities=24% Similarity=0.294 Sum_probs=57.9
Q ss_pred cHHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccC-Ch-HHHHHHHHHhccCCcEEEEEecC
Q 024162 15 PVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHEL-PG-DQLLEEISRVLKPGGTILIYKKL 92 (271)
Q Consensus 15 ~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~-~~-~~~L~ei~RvLKPGG~l~i~~~~ 92 (271)
.++.|++.++++.... +.++.+.++++..+++++++||+|++... |+. .+ ..++++++|+|||||+|++.++.
T Consensus 59 ~s~~~~~~a~~~~~~~----~~~~~~~~~d~~~~~~~~~~fD~v~~~~~-~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 133 (202)
T 2kw5_A 59 QSSVGLAKAKQLAQEK----GVKITTVQSNLADFDIVADAWEGIVSIFC-HLPSSLRQQLYPKVYQGLKPGGVFILEGFA 133 (202)
T ss_dssp SSHHHHHHHHHHHHHH----TCCEEEECCBTTTBSCCTTTCSEEEEECC-CCCHHHHHHHHHHHHTTCCSSEEEEEEEEC
T ss_pred CCHHHHHHHHHHHHhc----CCceEEEEcChhhcCCCcCCccEEEEEhh-cCCHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 3578888888774221 24789999999999999999999998542 332 23 78999999999999999999875
Q ss_pred C
Q 024162 93 T 93 (271)
Q Consensus 93 ~ 93 (271)
.
T Consensus 134 ~ 134 (202)
T 2kw5_A 134 P 134 (202)
T ss_dssp T
T ss_pred c
Confidence 4
No 84
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=98.21 E-value=7.1e-07 Score=78.97 Aligned_cols=77 Identities=18% Similarity=0.247 Sum_probs=59.3
Q ss_pred HHHHHHHHHHhCch-hhhcCCCCeEEEeccCCCCC---CCCCceeEEEec-cccccCCh--------HHHHHHHHHhccC
Q 024162 16 VSAVLNAIRDLGDE-AVEQCDPQIITQASSLSQLP---VESFSIDTVLSI-SSSHELPG--------DQLLEEISRVLKP 82 (271)
Q Consensus 16 s~~mv~~ar~~~~~-~~~~~~~~v~~~~~d~e~lp---~~~~sfD~V~s~-~~l~~~~~--------~~~L~ei~RvLKP 82 (271)
++.|++.++++... .......++.+..+++..++ +++++||+|++. .+++|+.+ ..+|++++|+|||
T Consensus 88 s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~Lkp 167 (293)
T 3thr_A 88 SDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRP 167 (293)
T ss_dssp CHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEE
T ss_pred CHHHHHHHHHhhhhcccccccceeeEeecChhhCccccccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCC
Confidence 67788888765311 00111245788889999888 889999999998 78887754 7899999999999
Q ss_pred CcEEEEEecC
Q 024162 83 GGTILIYKKL 92 (271)
Q Consensus 83 GG~l~i~~~~ 92 (271)
||+|++..+.
T Consensus 168 gG~l~~~~~~ 177 (293)
T 3thr_A 168 GGLLVIDHRN 177 (293)
T ss_dssp EEEEEEEEEC
T ss_pred CeEEEEEeCC
Confidence 9999998765
No 85
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=98.19 E-value=5.2e-06 Score=71.77 Aligned_cols=94 Identities=12% Similarity=0.050 Sum_probs=67.3
Q ss_pred cHHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCC---CCceeEEEeccccccCCh-HHHHHHHHHhccCCcEEEEEe
Q 024162 15 PVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVE---SFSIDTVLSISSSHELPG-DQLLEEISRVLKPGGTILIYK 90 (271)
Q Consensus 15 ~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~---~~sfD~V~s~~~l~~~~~-~~~L~ei~RvLKPGG~l~i~~ 90 (271)
.++.|++.+++..... ...++.+++++++++++. +++||+|++.. +.+ ..++++++|+|||||+|++..
T Consensus 102 ~s~~~~~~a~~~~~~~---~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~~----~~~~~~~l~~~~~~LkpgG~l~~~~ 174 (240)
T 1xdz_A 102 SLNKRITFLEKLSEAL---QLENTTFCHDRAETFGQRKDVRESYDIVTARA----VARLSVLSELCLPLVKKNGLFVALK 174 (240)
T ss_dssp SCHHHHHHHHHHHHHH---TCSSEEEEESCHHHHTTCTTTTTCEEEEEEEC----CSCHHHHHHHHGGGEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHc---CCCCEEEEeccHHHhcccccccCCccEEEEec----cCCHHHHHHHHHHhcCCCCEEEEEe
Confidence 3678888888764221 113589999999988764 68999999865 233 889999999999999999875
Q ss_pred cCCCCcccHHHHHHHHHHHHHHcCCcchhh
Q 024162 91 KLTSDKGDVDKAISALEGKLLLAGFLDAQR 120 (271)
Q Consensus 91 ~~~~~~~e~~~~~~~l~~~l~laGF~~v~~ 120 (271)
... .......+...+..+||..++.
T Consensus 175 g~~-----~~~~~~~~~~~l~~~g~~~~~~ 199 (240)
T 1xdz_A 175 AAS-----AEEELNAGKKAITTLGGELENI 199 (240)
T ss_dssp CC------CHHHHHHHHHHHHHTTEEEEEE
T ss_pred CCC-----chHHHHHHHHHHHHcCCeEeEE
Confidence 431 1122335566788899976544
No 86
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.18 E-value=1.6e-05 Score=72.88 Aligned_cols=72 Identities=13% Similarity=0.162 Sum_probs=55.7
Q ss_pred HHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCCh---HHHHHHHHHhccCCcEEEEEecC
Q 024162 17 SAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPG---DQLLEEISRVLKPGGTILIYKKL 92 (271)
Q Consensus 17 ~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~---~~~L~ei~RvLKPGG~l~i~~~~ 92 (271)
+.|++.++++.... ....++.++.+|+.+.|+++. |+|++..++|++++ ..+|++++|+|||||+|++.++.
T Consensus 223 ~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~~~~~--D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~ 297 (359)
T 1x19_A 223 PGAIDLVNENAAEK--GVADRMRGIAVDIYKESYPEA--DAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMV 297 (359)
T ss_dssp GGGHHHHHHHHHHT--TCTTTEEEEECCTTTSCCCCC--SEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEC
T ss_pred HHHHHHHHHHHHhc--CCCCCEEEEeCccccCCCCCC--CEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEecc
Confidence 45666666653111 112358999999998887754 99999999999876 77899999999999999998854
No 87
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.18 E-value=2.3e-06 Score=74.76 Aligned_cols=69 Identities=25% Similarity=0.370 Sum_probs=57.2
Q ss_pred cHHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccc-cCCh-HHHHHHHHHhccCCcEEEEEecC
Q 024162 15 PVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSH-ELPG-DQLLEEISRVLKPGGTILIYKKL 92 (271)
Q Consensus 15 ~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~-~~~~-~~~L~ei~RvLKPGG~l~i~~~~ 92 (271)
.++.|++.++++.. . .+++++++.+|+++++||+|++...++ +..+ ..+|++++|+|||||+|++..+.
T Consensus 84 ~s~~~l~~a~~~~~-------~--~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 154 (260)
T 2avn_A 84 PSKEMLEVAREKGV-------K--NVVEAKAEDLPFPSGAFEAVLALGDVLSYVENKDKAFSEIRRVLVPDGLLIATVDN 154 (260)
T ss_dssp SCHHHHHHHHHHTC-------S--CEEECCTTSCCSCTTCEEEEEECSSHHHHCSCHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred CCHHHHHHHHhhcC-------C--CEEECcHHHCCCCCCCEEEEEEcchhhhccccHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 46889999988752 1 178899999999999999999976554 4455 89999999999999999998875
No 88
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=98.17 E-value=1e-06 Score=80.02 Aligned_cols=69 Identities=7% Similarity=0.096 Sum_probs=55.7
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCCh-HHHHHHHHHhccCCcEEEEEecC
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPG-DQLLEEISRVLKPGGTILIYKKL 92 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~-~~~L~ei~RvLKPGG~l~i~~~~ 92 (271)
++.|++.||++.... .. .++.++++++.++| +++||+|++... .++ ..++++++|+|||||+|++.+..
T Consensus 155 s~~~l~~Ar~~~~~~--gl-~~v~~v~gDa~~l~--d~~FDvV~~~a~---~~d~~~~l~el~r~LkPGG~Lvv~~~~ 224 (298)
T 3fpf_A 155 EPDIAELSRKVIEGL--GV-DGVNVITGDETVID--GLEFDVLMVAAL---AEPKRRVFRNIHRYVDTETRIIYRTYT 224 (298)
T ss_dssp SHHHHHHHHHHHHHH--TC-CSEEEEESCGGGGG--GCCCSEEEECTT---CSCHHHHHHHHHHHCCTTCEEEEEECC
T ss_pred CHHHHHHHHHHHHhc--CC-CCeEEEECchhhCC--CCCcCEEEECCC---ccCHHHHHHHHHHHcCCCcEEEEEcCc
Confidence 788999999885321 12 57999999998876 789999997543 345 89999999999999999998854
No 89
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=98.17 E-value=4.9e-06 Score=73.00 Aligned_cols=103 Identities=12% Similarity=0.104 Sum_probs=69.0
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCC---CCCCCCCceeEEEeccccccCCh-HHHHHHHHHhccCCcEEEEEec
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLS---QLPVESFSIDTVLSISSSHELPG-DQLLEEISRVLKPGGTILIYKK 91 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e---~lp~~~~sfD~V~s~~~l~~~~~-~~~L~ei~RvLKPGG~l~i~~~ 91 (271)
++.|++.++++... ..++..+.+++. ..++..+++|+|++... +..+ ..++.+++|+|||||++++...
T Consensus 111 s~~~~~~l~~~a~~-----~~ni~~V~~d~~~p~~~~~~~~~vDvVf~d~~--~~~~~~~~l~~~~r~LKpGG~lvI~ik 183 (233)
T 4df3_A 111 APRVMRDLLTVVRD-----RRNIFPILGDARFPEKYRHLVEGVDGLYADVA--QPEQAAIVVRNARFFLRDGGYMLMAIK 183 (233)
T ss_dssp CHHHHHHHHHHSTT-----CTTEEEEESCTTCGGGGTTTCCCEEEEEECCC--CTTHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CHHHHHHHHHhhHh-----hcCeeEEEEeccCccccccccceEEEEEEecc--CChhHHHHHHHHHHhccCCCEEEEEEe
Confidence 57788888777532 246777777764 45677889999987543 2233 7899999999999999999864
Q ss_pred CCCC--cccHHHHHHHHHHHHHHcCCcchhhhhhcc
Q 024162 92 LTSD--KGDVDKAISALEGKLLLAGFLDAQRIQLKS 125 (271)
Q Consensus 92 ~~~~--~~e~~~~~~~l~~~l~laGF~~v~~~~~~~ 125 (271)
.... ........+.....|..+||..++.....|
T Consensus 184 ~r~~d~~~p~~~~~~~ev~~L~~~GF~l~e~i~L~p 219 (233)
T 4df3_A 184 ARSIDVTTEPSEVYKREIKTLMDGGLEIKDVVHLDP 219 (233)
T ss_dssp CCHHHHHTCCCHHHHHHHHHHHHTTCCEEEEEECTT
T ss_pred cccCCCCCChHHHHHHHHHHHHHCCCEEEEEEccCC
Confidence 4310 001112233445678889998877665444
No 90
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=98.16 E-value=9.6e-06 Score=66.29 Aligned_cols=74 Identities=14% Similarity=0.103 Sum_probs=56.6
Q ss_pred HHHHHHHHHHhCchhhhcCCC--CeEEEeccCCCCCCCCCceeEEEeccccccC-Ch-HHHHHHHHHhccCCcEEEEEec
Q 024162 16 VSAVLNAIRDLGDEAVEQCDP--QIITQASSLSQLPVESFSIDTVLSISSSHEL-PG-DQLLEEISRVLKPGGTILIYKK 91 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~--~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~-~~-~~~L~ei~RvLKPGG~l~i~~~ 91 (271)
++.|++.++++.... ... ++.+..+++.+ ++++++||+|++...+++. .. ..++++++++|||||++++..+
T Consensus 83 ~~~~~~~a~~~~~~~---~~~~~~~~~~~~d~~~-~~~~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 158 (194)
T 1dus_A 83 NRRAIKLAKENIKLN---NLDNYDIRVVHSDLYE-NVKDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQ 158 (194)
T ss_dssp CHHHHHHHHHHHHHT---TCTTSCEEEEECSTTT-TCTTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHc---CCCccceEEEECchhc-ccccCCceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEEC
Confidence 567788887764211 112 38899999877 4557899999998877763 33 7899999999999999999988
Q ss_pred CC
Q 024162 92 LT 93 (271)
Q Consensus 92 ~~ 93 (271)
..
T Consensus 159 ~~ 160 (194)
T 1dus_A 159 TK 160 (194)
T ss_dssp ST
T ss_pred CC
Confidence 73
No 91
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.16 E-value=3.2e-06 Score=77.38 Aligned_cols=84 Identities=15% Similarity=0.172 Sum_probs=61.0
Q ss_pred CCeEEEeccCCCCCCCCCceeEEEeccccccCCh---HHHHHHHHHhccCCcEEEEEecCCCCc--ccHHH---------
Q 024162 36 PQIITQASSLSQLPVESFSIDTVLSISSSHELPG---DQLLEEISRVLKPGGTILIYKKLTSDK--GDVDK--------- 101 (271)
Q Consensus 36 ~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~---~~~L~ei~RvLKPGG~l~i~~~~~~~~--~e~~~--------- 101 (271)
.+|.++.+|+. .+++ +||+|++..++|++++ ..+|++++|+|||||+|++.+...... .....
T Consensus 232 ~~v~~~~~d~~-~~~p--~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~~~~~~d~~~~~~ 308 (348)
T 3lst_A 232 GRWKVVEGDFL-REVP--HADVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAHQSKEMDFMMLAA 308 (348)
T ss_dssp TSEEEEECCTT-TCCC--CCSEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCCHHHHHHHHHHHT
T ss_pred CCeEEEecCCC-CCCC--CCcEEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhhhcChhhhhc
Confidence 56999999996 4455 8999999999999987 489999999999999999998643211 00100
Q ss_pred ------HHHHHHHHHHHcCCcchhhhh
Q 024162 102 ------AISALEGKLLLAGFLDAQRIQ 122 (271)
Q Consensus 102 ------~~~~l~~~l~laGF~~v~~~~ 122 (271)
..+++...+..+||..++...
T Consensus 309 ~~~~~~t~~e~~~ll~~aGf~~~~~~~ 335 (348)
T 3lst_A 309 RTGQERTAAELEPLFTAAGLRLDRVVG 335 (348)
T ss_dssp TSCCCCBHHHHHHHHHHTTEEEEEEEE
T ss_pred CCCcCCCHHHHHHHHHHCCCceEEEEE
Confidence 123455667778887765543
No 92
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.15 E-value=6.3e-06 Score=75.32 Aligned_cols=102 Identities=16% Similarity=0.221 Sum_probs=68.9
Q ss_pred HHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCCh---HHHHHHHHHhccCCcEEEEEecC-
Q 024162 17 SAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPG---DQLLEEISRVLKPGGTILIYKKL- 92 (271)
Q Consensus 17 ~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~---~~~L~ei~RvLKPGG~l~i~~~~- 92 (271)
+.|++.++++.... ....++.++.+|+.+ +++. .||+|++..++|++++ ..++++++++|||||+|++.+..
T Consensus 216 ~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~-~~~~-~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~ 291 (360)
T 1tw3_A 216 AGTVDTARSYLKDE--GLSDRVDVVEGDFFE-PLPR-KADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERDD 291 (360)
T ss_dssp TTHHHHHHHHHHHT--TCTTTEEEEECCTTS-CCSS-CEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECCB
T ss_pred HHHHHHHHHHHHhc--CCCCceEEEeCCCCC-CCCC-CccEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEec
Confidence 45777777653211 112368999999865 4444 4999999999999886 47999999999999999999876
Q ss_pred CC-Ccc-cHHH---------------HHHHHHHHHHHcCCcchhhhh
Q 024162 93 TS-DKG-DVDK---------------AISALEGKLLLAGFLDAQRIQ 122 (271)
Q Consensus 93 ~~-~~~-e~~~---------------~~~~l~~~l~laGF~~v~~~~ 122 (271)
.. ... .... ..+.+...+..+||..++...
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~ 338 (360)
T 1tw3_A 292 LHENSFNEQFTELDLRMLVFLGGALRTREKWDGLAASAGLVVEEVRQ 338 (360)
T ss_dssp CGGGCCSHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEEEEE
T ss_pred cCCCCCcchhhhccHHHhhhcCCcCCCHHHHHHHHHHCCCeEEEEEe
Confidence 21 100 0100 123455667788888765543
No 93
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.15 E-value=3e-06 Score=76.11 Aligned_cols=77 Identities=12% Similarity=0.060 Sum_probs=59.5
Q ss_pred HHHHHHHHHHhCchhhh----cCCCCeEEEeccCCCCC----CC--CCceeEEEeccccccC-Ch----HHHHHHHHHhc
Q 024162 16 VSAVLNAIRDLGDEAVE----QCDPQIITQASSLSQLP----VE--SFSIDTVLSISSSHEL-PG----DQLLEEISRVL 80 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~----~~~~~v~~~~~d~e~lp----~~--~~sfD~V~s~~~l~~~-~~----~~~L~ei~RvL 80 (271)
++.|++.++++...... ....++.++++|++.++ ++ +++||+|++..++||+ .+ ..+|++++|+|
T Consensus 66 s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L 145 (313)
T 3bgv_A 66 ADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQMCFDICSCQFVCHYSFESYEQADMMLRNACERL 145 (313)
T ss_dssp CHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTE
T ss_pred CHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHh
Confidence 57788888876421100 01246899999999886 64 4599999999999997 32 68999999999
Q ss_pred cCCcEEEEEecC
Q 024162 81 KPGGTILIYKKL 92 (271)
Q Consensus 81 KPGG~l~i~~~~ 92 (271)
||||.|++..+.
T Consensus 146 kpgG~li~~~~~ 157 (313)
T 3bgv_A 146 SPGGYFIGTTPN 157 (313)
T ss_dssp EEEEEEEEEEEC
T ss_pred CCCcEEEEecCC
Confidence 999999999876
No 94
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=98.15 E-value=7e-06 Score=70.00 Aligned_cols=94 Identities=13% Similarity=0.045 Sum_probs=65.3
Q ss_pred cHHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCC--CCCCceeEEEeccccccCC---------hHHHHHHHHHhccCC
Q 024162 15 PVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLP--VESFSIDTVLSISSSHELP---------GDQLLEEISRVLKPG 83 (271)
Q Consensus 15 ~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp--~~~~sfD~V~s~~~l~~~~---------~~~~L~ei~RvLKPG 83 (271)
.++.|++.++++... ....++.++++|+..++ +++++||.|++.+...|.. ...++++++|+||||
T Consensus 70 ~s~~~l~~a~~~~~~---~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~Lkpg 146 (213)
T 2fca_A 70 LFKSVIVTAVQKVKD---SEAQNVKLLNIDADTLTDVFEPGEVKRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKG 146 (213)
T ss_dssp SCHHHHHHHHHHHHH---SCCSSEEEECCCGGGHHHHCCTTSCCEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTS
T ss_pred echHHHHHHHHHHHH---cCCCCEEEEeCCHHHHHhhcCcCCcCEEEEECCCCCcCccccccccCcHHHHHHHHHHcCCC
Confidence 367788888776421 12246899999998876 7889999998866544332 268999999999999
Q ss_pred cEEEEEecCCCCcccHHHHHHHHHHHHHHcCCcch
Q 024162 84 GTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDA 118 (271)
Q Consensus 84 G~l~i~~~~~~~~~e~~~~~~~l~~~l~laGF~~v 118 (271)
|.|++.+... .. ...+...+..+||...
T Consensus 147 G~l~~~td~~----~~---~~~~~~~~~~~g~~~~ 174 (213)
T 2fca_A 147 GSIHFKTDNR----GL---FEYSLKSFSEYGLLLT 174 (213)
T ss_dssp CEEEEEESCH----HH---HHHHHHHHHHHTCEEE
T ss_pred CEEEEEeCCH----HH---HHHHHHHHHHCCCccc
Confidence 9999987431 11 1234445666787543
No 95
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.13 E-value=1.2e-05 Score=72.65 Aligned_cols=71 Identities=15% Similarity=0.139 Sum_probs=54.5
Q ss_pred HHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCCh---HHHHHHHHHhccCCcEEEEEecC
Q 024162 18 AVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPG---DQLLEEISRVLKPGGTILIYKKL 92 (271)
Q Consensus 18 ~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~---~~~L~ei~RvLKPGG~l~i~~~~ 92 (271)
.|++.++++.... ....++.++.+|+.+ +++ .+||+|++..++|++.+ ..+|++++++|||||+|++.+..
T Consensus 201 ~~~~~a~~~~~~~--~~~~~v~~~~~d~~~-~~~-~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 274 (334)
T 2ip2_A 201 GSLGVARDNLSSL--LAGERVSLVGGDMLQ-EVP-SNGDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERT 274 (334)
T ss_dssp TCTHHHHHHTHHH--HHTTSEEEEESCTTT-CCC-SSCSEEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred HHHHHHHHHHhhc--CCCCcEEEecCCCCC-CCC-CCCCEEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 4455566553211 112468999999977 665 68999999999998876 48999999999999999999865
No 96
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.13 E-value=2.1e-06 Score=73.93 Aligned_cols=73 Identities=11% Similarity=0.069 Sum_probs=60.6
Q ss_pred cHHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCC-----CceeEEEeccccccCC--h-HHHHHHHHHhccCCcEE
Q 024162 15 PVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVES-----FSIDTVLSISSSHELP--G-DQLLEEISRVLKPGGTI 86 (271)
Q Consensus 15 ~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~-----~sfD~V~s~~~l~~~~--~-~~~L~ei~RvLKPGG~l 86 (271)
.++.|++.++++.. ..++.++++++.++++.. ..||+|++..++|+++ + ..++++++|+|||||+|
T Consensus 86 ~s~~~~~~a~~~~~------~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l 159 (245)
T 3ggd_A 86 VSKSALEIAAKENT------AANISYRLLDGLVPEQAAQIHSEIGDANIYMRTGFHHIPVEKRELLGQSLRILLGKQGAM 159 (245)
T ss_dssp SCHHHHHHHHHHSC------CTTEEEEECCTTCHHHHHHHHHHHCSCEEEEESSSTTSCGGGHHHHHHHHHHHHTTTCEE
T ss_pred CCHHHHHHHHHhCc------ccCceEEECcccccccccccccccCccEEEEcchhhcCCHHHHHHHHHHHHHHcCCCCEE
Confidence 36789999988752 146899999999876543 3499999999999998 4 79999999999999999
Q ss_pred EEEecCC
Q 024162 87 LIYKKLT 93 (271)
Q Consensus 87 ~i~~~~~ 93 (271)
++.++..
T Consensus 160 ~i~~~~~ 166 (245)
T 3ggd_A 160 YLIELGT 166 (245)
T ss_dssp EEEEECT
T ss_pred EEEeCCc
Confidence 9998864
No 97
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=98.12 E-value=6.8e-06 Score=72.51 Aligned_cols=71 Identities=13% Similarity=0.126 Sum_probs=59.0
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCCh---HHHHHHHHHhccCCcEEEEEec
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPG---DQLLEEISRVLKPGGTILIYKK 91 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~---~~~L~ei~RvLKPGG~l~i~~~ 91 (271)
++.|++.++++... .+.++.++++++..+++ +++||+|++..++||++. ..++++++|+|||||+|++...
T Consensus 151 s~~~~~~a~~~~~~----~~~~~~~~~~d~~~~~~-~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 224 (286)
T 3m70_A 151 NENSIAFLNETKEK----ENLNISTALYDINAANI-QENYDFIVSTVVFMFLNRERVPSIIKNMKEHTNVGGYNLIVAA 224 (286)
T ss_dssp CHHHHHHHHHHHHH----TTCCEEEEECCGGGCCC-CSCEEEEEECSSGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CHHHHHHHHHHHHH----cCCceEEEEeccccccc-cCCccEEEEccchhhCCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 67888888877422 12478999999999888 889999999999999864 6899999999999999877654
No 98
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=98.11 E-value=3.4e-06 Score=75.45 Aligned_cols=56 Identities=20% Similarity=0.363 Sum_probs=47.9
Q ss_pred CCeEEEeccCCCCC-----CCCCceeEEEeccccccCC------h-HHHHHHHHHhccCCcEEEEEec
Q 024162 36 PQIITQASSLSQLP-----VESFSIDTVLSISSSHELP------G-DQLLEEISRVLKPGGTILIYKK 91 (271)
Q Consensus 36 ~~v~~~~~d~e~lp-----~~~~sfD~V~s~~~l~~~~------~-~~~L~ei~RvLKPGG~l~i~~~ 91 (271)
.+|.|.++++...+ +.+++||+|++..+++|++ . ..++++++|+|||||+|++...
T Consensus 154 ~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~~~~~LkpGG~lil~~~ 221 (292)
T 3g07_A 154 NNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRRIYRHLRPGGILVLEPQ 221 (292)
T ss_dssp TTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred ccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHHHHHHhCCCcEEEEecC
Confidence 36899999987654 6789999999999988874 3 7899999999999999999754
No 99
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=98.10 E-value=2e-05 Score=67.10 Aligned_cols=92 Identities=18% Similarity=0.223 Sum_probs=64.3
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCC-CCCCCceeEEEeccccccCCh--------------------HHHHH
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQL-PVESFSIDTVLSISSSHELPG--------------------DQLLE 74 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~l-p~~~~sfD~V~s~~~l~~~~~--------------------~~~L~ 74 (271)
++.|++.+++.... .+.++.++++|+..+ ++++++||+|++...+++... ..+++
T Consensus 88 s~~~~~~a~~~~~~----~~~~v~~~~~d~~~~~~~~~~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 163 (230)
T 3evz_A 88 DEEFFEYARRNIER----NNSNVRLVKSNGGIIKGVVEGTFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLE 163 (230)
T ss_dssp CHHHHHHHHHHHHH----TTCCCEEEECSSCSSTTTCCSCEEEEEECCCCC---------------CCSSSCHHHHHHHH
T ss_pred CHHHHHHHHHHHHH----hCCCcEEEeCCchhhhhcccCceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHH
Confidence 57788888876421 123788999997543 566789999999765544322 67899
Q ss_pred HHHHhccCCcEEEEEecCCCCcccHHHHHHHHHHHHHHcCCcc
Q 024162 75 EISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLD 117 (271)
Q Consensus 75 ei~RvLKPGG~l~i~~~~~~~~~e~~~~~~~l~~~l~laGF~~ 117 (271)
++.++|||||+|++..... ......+...+..+||..
T Consensus 164 ~~~~~LkpgG~l~~~~~~~------~~~~~~~~~~l~~~g~~~ 200 (230)
T 3evz_A 164 EAFDHLNPGGKVALYLPDK------EKLLNVIKERGIKLGYSV 200 (230)
T ss_dssp HHGGGEEEEEEEEEEEESC------HHHHHHHHHHHHHTTCEE
T ss_pred HHHHHhCCCeEEEEEeccc------HhHHHHHHHHHHHcCCce
Confidence 9999999999999976542 112335667788899954
No 100
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=98.09 E-value=1.2e-05 Score=67.92 Aligned_cols=110 Identities=15% Similarity=0.129 Sum_probs=68.8
Q ss_pred EEEecCCcccHHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccc---c--ccCCh-HHHHHHHHHh
Q 024162 6 LALSEDKILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISS---S--HELPG-DQLLEEISRV 79 (271)
Q Consensus 6 l~~td~~~~~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~---l--~~~~~-~~~L~ei~Rv 79 (271)
++.+|.+...+..+.+.++++.. .....++.+++++++++|+++++ |.|+.... . |++++ ..++++++|+
T Consensus 54 v~gvD~s~~~l~~~~~~a~~~~~---~~~~~~v~~~~~d~~~l~~~~~~-d~v~~~~~~~~~~~~~~~~~~~~l~~~~~~ 129 (218)
T 3mq2_A 54 VVALDADKSRMEKISAKAAAKPA---KGGLPNLLYLWATAERLPPLSGV-GELHVLMPWGSLLRGVLGSSPEMLRGMAAV 129 (218)
T ss_dssp EEEEESCGGGGHHHHHHHTSCGG---GTCCTTEEEEECCSTTCCSCCCE-EEEEEESCCHHHHHHHHTSSSHHHHHHHHT
T ss_pred EEEEECCHHHHHHHHHHHHHhhh---hcCCCceEEEecchhhCCCCCCC-CEEEEEccchhhhhhhhccHHHHHHHHHHH
Confidence 44556555544444444444321 11224799999999999998877 88774332 2 24544 8899999999
Q ss_pred ccCCcEEEEEecCCCC-----------cccHHHHHHHHHHHHHHcCCcchh
Q 024162 80 LKPGGTILIYKKLTSD-----------KGDVDKAISALEGKLLLAGFLDAQ 119 (271)
Q Consensus 80 LKPGG~l~i~~~~~~~-----------~~e~~~~~~~l~~~l~laGF~~v~ 119 (271)
|||||+|++....... ........+.+...+..+||...+
T Consensus 130 LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~i~~ 180 (218)
T 3mq2_A 130 CRPGASFLVALNLHAWRPSVPEVGEHPEPTPDSADEWLAPRYAEAGWKLAD 180 (218)
T ss_dssp EEEEEEEEEEEEGGGBTTBCGGGTTCCCCCHHHHHHHHHHHHHHTTEEEEE
T ss_pred cCCCcEEEEEeccccccccccccccCCccchHHHHHHHHHHHHHcCCCcee
Confidence 9999999996532110 001111223467778899997543
No 101
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=98.08 E-value=1.4e-05 Score=68.50 Aligned_cols=106 Identities=10% Similarity=0.106 Sum_probs=66.5
Q ss_pred EEEecCCcccHHHHHHHHHHhCchhhhcCCCCeEEEeccCCC---CCCCCCceeEEEeccccccCCh-HHHHHHHHHhcc
Q 024162 6 LALSEDKILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQ---LPVESFSIDTVLSISSSHELPG-DQLLEEISRVLK 81 (271)
Q Consensus 6 l~~td~~~~~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~---lp~~~~sfD~V~s~~~l~~~~~-~~~L~ei~RvLK 81 (271)
++..|.+...++.|++.++.+ .++.++++++.. +++.+++||+|++... .... ..++.+++|+||
T Consensus 105 v~gvD~s~~~i~~~~~~a~~~---------~~v~~~~~d~~~~~~~~~~~~~~D~V~~~~~--~~~~~~~~~~~~~~~Lk 173 (233)
T 2ipx_A 105 VYAVEFSHRSGRDLINLAKKR---------TNIIPVIEDARHPHKYRMLIAMVDVIFADVA--QPDQTRIVALNAHTFLR 173 (233)
T ss_dssp EEEECCCHHHHHHHHHHHHHC---------TTEEEECSCTTCGGGGGGGCCCEEEEEECCC--CTTHHHHHHHHHHHHEE
T ss_pred EEEEECCHHHHHHHHHHhhcc---------CCeEEEEcccCChhhhcccCCcEEEEEEcCC--CccHHHHHHHHHHHHcC
Confidence 455565555445555555443 457899999987 5667789999998554 2222 556889999999
Q ss_pred CCcEEEEEecCC--CCcccHHHHHHHHHHHHHHcCCcchhhhh
Q 024162 82 PGGTILIYKKLT--SDKGDVDKAISALEGKLLLAGFLDAQRIQ 122 (271)
Q Consensus 82 PGG~l~i~~~~~--~~~~e~~~~~~~l~~~l~laGF~~v~~~~ 122 (271)
|||+|++..... .........+..-...|..+||..++...
T Consensus 174 pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 216 (233)
T 2ipx_A 174 NGGHFVISIKANCIDSTASAEAVFASEVKKMQQENMKPQEQLT 216 (233)
T ss_dssp EEEEEEEEEEHHHHCSSSCHHHHHHHHHHTTGGGTEEEEEEEE
T ss_pred CCeEEEEEEcccccccCCCHHHHHHHHHHHHHHCCCceEEEEe
Confidence 999999965431 01111111121223567788998766443
No 102
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.07 E-value=1e-05 Score=74.89 Aligned_cols=55 Identities=13% Similarity=0.159 Sum_probs=47.9
Q ss_pred CCeEEEeccCCCCCCCCCceeEEEeccccccCCh---HHHHHHHHHhccCCcEEEEEecCC
Q 024162 36 PQIITQASSLSQLPVESFSIDTVLSISSSHELPG---DQLLEEISRVLKPGGTILIYKKLT 93 (271)
Q Consensus 36 ~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~---~~~L~ei~RvLKPGG~l~i~~~~~ 93 (271)
.++.++.+|+.+ |++.+ |+|++..++|++++ ..+|++++|+|||||+|++.+...
T Consensus 246 ~~v~~~~~d~~~-~~p~~--D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~ 303 (368)
T 3reo_A 246 SGVEHLGGDMFD-GVPKG--DAIFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYIL 303 (368)
T ss_dssp TTEEEEECCTTT-CCCCC--SEEEEESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEECCC
T ss_pred CCCEEEecCCCC-CCCCC--CEEEEechhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 568999999987 77754 99999999999986 478999999999999999998653
No 103
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=98.07 E-value=5.4e-06 Score=70.92 Aligned_cols=85 Identities=12% Similarity=0.124 Sum_probs=63.7
Q ss_pred cHHHHHHHHHHhCchhhhcCCCCeEEEeccC-CCCCCC-CCceeEEEeccccccCChHHHHHHHHHhccCCcEEEEEecC
Q 024162 15 PVSAVLNAIRDLGDEAVEQCDPQIITQASSL-SQLPVE-SFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYKKL 92 (271)
Q Consensus 15 ~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~-e~lp~~-~~sfD~V~s~~~l~~~~~~~~L~ei~RvLKPGG~l~i~~~~ 92 (271)
.++.|++.++++. .++.++++++ +.+|++ +++||+|++.. ....++++++|+|||||+|+.....
T Consensus 78 ~s~~~~~~a~~~~--------~~~~~~~~d~~~~~~~~~~~~fD~v~~~~-----~~~~~l~~~~~~LkpgG~l~~~~~~ 144 (226)
T 3m33_A 78 FSPELLKLARANA--------PHADVYEWNGKGELPAGLGAPFGLIVSRR-----GPTSVILRLPELAAPDAHFLYVGPR 144 (226)
T ss_dssp SCHHHHHHHHHHC--------TTSEEEECCSCSSCCTTCCCCEEEEEEES-----CCSGGGGGHHHHEEEEEEEEEEESS
T ss_pred CCHHHHHHHHHhC--------CCceEEEcchhhccCCcCCCCEEEEEeCC-----CHHHHHHHHHHHcCCCcEEEEeCCc
Confidence 3678899988873 4688999999 688998 89999999872 2267789999999999999933221
Q ss_pred CCCcccHHHHHHHHHHHHHHcCCcchhh
Q 024162 93 TSDKGDVDKAISALEGKLLLAGFLDAQR 120 (271)
Q Consensus 93 ~~~~~e~~~~~~~l~~~l~laGF~~v~~ 120 (271)
. .. ..+...+..+||..+..
T Consensus 145 ~-~~-------~~~~~~l~~~Gf~~~~~ 164 (226)
T 3m33_A 145 L-NV-------PEVPERLAAVGWDIVAE 164 (226)
T ss_dssp S-CC-------THHHHHHHHTTCEEEEE
T ss_pred C-CH-------HHHHHHHHHCCCeEEEE
Confidence 1 11 14566788899987543
No 104
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=98.05 E-value=3.1e-05 Score=66.41 Aligned_cols=98 Identities=17% Similarity=0.183 Sum_probs=63.8
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCC----CCCCCCceeEEEeccccccCCh-HHHHHHHHHhccCCcEEEEEe
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQ----LPVESFSIDTVLSISSSHELPG-DQLLEEISRVLKPGGTILIYK 90 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~----lp~~~~sfD~V~s~~~l~~~~~-~~~L~ei~RvLKPGG~l~i~~ 90 (271)
++.|++.++++... ..++.++.+++.. +++. ++||+|+... ..... ..++++++|+|||||+|++..
T Consensus 107 s~~~~~~a~~~~~~-----~~~v~~~~~d~~~~~~~~~~~-~~~D~v~~~~--~~~~~~~~~l~~~~~~LkpgG~l~i~~ 178 (230)
T 1fbn_A 107 APRIMRELLDACAE-----RENIIPILGDANKPQEYANIV-EKVDVIYEDV--AQPNQAEILIKNAKWFLKKGGYGMIAI 178 (230)
T ss_dssp CHHHHHHHHHHTTT-----CTTEEEEECCTTCGGGGTTTS-CCEEEEEECC--CSTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CHHHHHHHHHHhhc-----CCCeEEEECCCCCcccccccC-ccEEEEEEec--CChhHHHHHHHHHHHhCCCCcEEEEEE
Confidence 57788888877522 1578999999988 7777 7899999321 11111 667999999999999999962
Q ss_pred cCC--CCcccHHHH-HHHHHHHHHHcCCcchhhhh
Q 024162 91 KLT--SDKGDVDKA-ISALEGKLLLAGFLDAQRIQ 122 (271)
Q Consensus 91 ~~~--~~~~e~~~~-~~~l~~~l~laGF~~v~~~~ 122 (271)
... ......... .+.+. .+..+||..++...
T Consensus 179 ~~~~~~~~~~~~~~~~~~l~-~l~~~Gf~~~~~~~ 212 (230)
T 1fbn_A 179 KARSIDVTKDPKEIFKEQKE-ILEAGGFKIVDEVD 212 (230)
T ss_dssp EGGGTCSSSCHHHHHHHHHH-HHHHHTEEEEEEEE
T ss_pred ecCCCCCCCCHHHhhHHHHH-HHHHCCCEEEEEEc
Confidence 110 111111111 23555 67788998765543
No 105
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.05 E-value=1.1e-05 Score=72.39 Aligned_cols=53 Identities=13% Similarity=0.188 Sum_probs=47.3
Q ss_pred CeEEEeccCCCCCCC-CCceeEEEeccccccCCh---HHHHHHHHHhccCCcEEEEE
Q 024162 37 QIITQASSLSQLPVE-SFSIDTVLSISSSHELPG---DQLLEEISRVLKPGGTILIY 89 (271)
Q Consensus 37 ~v~~~~~d~e~lp~~-~~sfD~V~s~~~l~~~~~---~~~L~ei~RvLKPGG~l~i~ 89 (271)
.|.|.++++.+.|++ .+.||+|++.++++|+.+ ..++++++++|+|||.|++-
T Consensus 195 ~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 195 YVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp TEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred cCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 689999999887776 678999999999999875 68999999999999999974
No 106
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=98.04 E-value=7.7e-06 Score=71.43 Aligned_cols=66 Identities=26% Similarity=0.358 Sum_probs=54.9
Q ss_pred cHHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCChHHHHHHHHHhccCCcEEEEEecCCC
Q 024162 15 PVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYKKLTS 94 (271)
Q Consensus 15 ~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~~~~L~ei~RvLKPGG~l~i~~~~~~ 94 (271)
.++.|++.++++. .++.+.+++++.+|+++++||+|++..+. .++++++|+|||||+|++.++...
T Consensus 117 ~s~~~~~~a~~~~--------~~~~~~~~d~~~~~~~~~~fD~v~~~~~~------~~l~~~~~~L~pgG~l~~~~~~~~ 182 (269)
T 1p91_A 117 VSKVAIKAAAKRY--------PQVTFCVASSHRLPFSDTSMDAIIRIYAP------CKAEELARVVKPGGWVITATPGPR 182 (269)
T ss_dssp SCHHHHHHHHHHC--------TTSEEEECCTTSCSBCTTCEEEEEEESCC------CCHHHHHHHEEEEEEEEEEEECTT
T ss_pred CCHHHHHHHHHhC--------CCcEEEEcchhhCCCCCCceeEEEEeCCh------hhHHHHHHhcCCCcEEEEEEcCHH
Confidence 3678888888775 45688999999999999999999986553 247999999999999999988754
No 107
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=98.04 E-value=3.5e-05 Score=67.24 Aligned_cols=86 Identities=7% Similarity=-0.065 Sum_probs=58.7
Q ss_pred EEEecCCcc--cHHHHHHHHHHhCchhhhcCCCCeEEEecc---CCCCCCCCCceeEEEeccccccCCh-HHHHHHHHHh
Q 024162 6 LALSEDKIL--PVSAVLNAIRDLGDEAVEQCDPQIITQASS---LSQLPVESFSIDTVLSISSSHELPG-DQLLEEISRV 79 (271)
Q Consensus 6 l~~td~~~~--~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d---~e~lp~~~~sfD~V~s~~~l~~~~~-~~~L~ei~Rv 79 (271)
++.+|.+.. .++.|++.++++.... ....++.+++++ ...+|+++++||+|++..+++|+++ ..+++.+.++
T Consensus 71 v~gvD~s~~~~~~~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l 148 (275)
T 3bkx_A 71 VTGIDIASPDYGAPLTLGQAWNHLLAG--PLGDRLTVHFNTNLSDDLGPIADQHFDRVVLAHSLWYFASANALALLFKNM 148 (275)
T ss_dssp EEEECSSCTTCCSSSCHHHHHHHHHTS--TTGGGEEEECSCCTTTCCGGGTTCCCSEEEEESCGGGSSCHHHHHHHHHHH
T ss_pred EEEEECCccccccHHHHHHHHHHHHhc--CCCCceEEEECChhhhccCCCCCCCEEEEEEccchhhCCCHHHHHHHHHHH
Confidence 344454433 2234677777663211 011368899988 5677888999999999999999987 5555555666
Q ss_pred ccCCcEEEEEecCC
Q 024162 80 LKPGGTILIYKKLT 93 (271)
Q Consensus 80 LKPGG~l~i~~~~~ 93 (271)
++|||++++.++..
T Consensus 149 ~~~gG~l~~~~~~~ 162 (275)
T 3bkx_A 149 AAVCDHVDVAEWSM 162 (275)
T ss_dssp TTTCSEEEEEEECS
T ss_pred hCCCCEEEEEEecC
Confidence 66699999998764
No 108
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=98.03 E-value=2.8e-05 Score=66.40 Aligned_cols=106 Identities=15% Similarity=0.166 Sum_probs=63.3
Q ss_pred EEEEecCCcccHHHHHHHHHHhCchhhhcCCCCeEEEeccCCCC----CCCCCceeEEEeccccccCCh-HHHHHHHHHh
Q 024162 5 VLALSEDKILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQL----PVESFSIDTVLSISSSHELPG-DQLLEEISRV 79 (271)
Q Consensus 5 vl~~td~~~~~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~l----p~~~~sfD~V~s~~~l~~~~~-~~~L~ei~Rv 79 (271)
-++..|.+...++.|.+.++.+ .++.++++|+... ++. ++||+|++... +. .. ..++++++|+
T Consensus 83 ~V~gvD~s~~~l~~~~~~a~~~---------~~v~~~~~d~~~~~~~~~~~-~~fD~V~~~~~-~~-~~~~~~l~~~~r~ 150 (210)
T 1nt2_A 83 IIYAVEYSAKPFEKLLELVRER---------NNIIPLLFDASKPWKYSGIV-EKVDLIYQDIA-QK-NQIEILKANAEFF 150 (210)
T ss_dssp EEEEECCCHHHHHHHHHHHHHC---------SSEEEECSCTTCGGGTTTTC-CCEEEEEECCC-ST-THHHHHHHHHHHH
T ss_pred EEEEEECCHHHHHHHHHHHhcC---------CCeEEEEcCCCCchhhcccc-cceeEEEEecc-Ch-hHHHHHHHHHHHH
Confidence 4556666655555555555432 3577888888763 555 79999998742 22 22 4569999999
Q ss_pred ccCCcEEEEEecCC--CCcccHHHHHHHHHHHHHHcCCcchhhhhh
Q 024162 80 LKPGGTILIYKKLT--SDKGDVDKAISALEGKLLLAGFLDAQRIQL 123 (271)
Q Consensus 80 LKPGG~l~i~~~~~--~~~~e~~~~~~~l~~~l~laGF~~v~~~~~ 123 (271)
|||||+|++..... +...............+..+ |..++....
T Consensus 151 LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~-f~~~~~~~~ 195 (210)
T 1nt2_A 151 LKEKGEVVIMVKARSIDSTAEPEEVFKSVLKEMEGD-FKIVKHGSL 195 (210)
T ss_dssp EEEEEEEEEEEEHHHHCTTSCHHHHHHHHHHHHHTT-SEEEEEEEC
T ss_pred hCCCCEEEEEEecCCccccCCHHHHHHHHHHHHHhh-cEEeeeecC
Confidence 99999999984221 01111222221112236666 877666544
No 109
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=98.02 E-value=8.4e-06 Score=67.06 Aligned_cols=75 Identities=13% Similarity=0.016 Sum_probs=52.8
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCC-CCCCceeEEEecccc-cc-------CC-h-HHHHHHHHHhccCCc
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLP-VESFSIDTVLSISSS-HE-------LP-G-DQLLEEISRVLKPGG 84 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp-~~~~sfD~V~s~~~l-~~-------~~-~-~~~L~ei~RvLKPGG 84 (271)
++.|++.++++.... ...++.+++++++.++ +.+++||+|++.... ++ .. . ..++++++|+|||||
T Consensus 53 s~~~l~~a~~~~~~~---~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG 129 (185)
T 3mti_A 53 QEQALGKTSQRLSDL---GIENTELILDGHENLDHYVREPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGG 129 (185)
T ss_dssp CHHHHHHHHHHHHHH---TCCCEEEEESCGGGGGGTCCSCEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEEE
T ss_pred CHHHHHHHHHHHHHc---CCCcEEEEeCcHHHHHhhccCCcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCc
Confidence 678888888875321 1156888888887764 557899999876322 21 11 2 578899999999999
Q ss_pred EEEEEecCC
Q 024162 85 TILIYKKLT 93 (271)
Q Consensus 85 ~l~i~~~~~ 93 (271)
+|++..+..
T Consensus 130 ~l~i~~~~~ 138 (185)
T 3mti_A 130 RLAIMIYYG 138 (185)
T ss_dssp EEEEEEC--
T ss_pred EEEEEEeCC
Confidence 999988753
No 110
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=97.98 E-value=3.7e-05 Score=71.00 Aligned_cols=54 Identities=20% Similarity=0.282 Sum_probs=47.9
Q ss_pred CCeEEEeccCCCCCCCCCceeEEEeccccccCCh---HHHHHHHHHhccCCcEEEEEecC
Q 024162 36 PQIITQASSLSQLPVESFSIDTVLSISSSHELPG---DQLLEEISRVLKPGGTILIYKKL 92 (271)
Q Consensus 36 ~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~---~~~L~ei~RvLKPGG~l~i~~~~ 92 (271)
.++.++.+|+.+ |++.+ |+|++..++|++++ ..+|++++|+|||||+|++.+..
T Consensus 244 ~~v~~~~~D~~~-~~p~~--D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~ 300 (364)
T 3p9c_A 244 PGVTHVGGDMFK-EVPSG--DTILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCI 300 (364)
T ss_dssp TTEEEEECCTTT-CCCCC--SEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred CCeEEEeCCcCC-CCCCC--CEEEehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 568999999987 88765 99999999999976 57899999999999999999865
No 111
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=97.97 E-value=1e-05 Score=69.81 Aligned_cols=93 Identities=15% Similarity=0.039 Sum_probs=67.2
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCCh-HHHHHHHHHhccCCcEEEEEecCCC
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPG-DQLLEEISRVLKPGGTILIYKKLTS 94 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~-~~~L~ei~RvLKPGG~l~i~~~~~~ 94 (271)
++.|++.+++...... ...++.+..+++.+.++++++||+|++. +++ ..++.++.++|||||++++..+..
T Consensus 130 ~~~~~~~a~~~~~~~~--g~~~v~~~~~d~~~~~~~~~~~D~v~~~-----~~~~~~~l~~~~~~L~~gG~l~~~~~~~- 201 (258)
T 2pwy_A 130 RPHHLAQAERNVRAFW--QVENVRFHLGKLEEAELEEAAYDGVALD-----LMEPWKVLEKAALALKPDRFLVAYLPNI- 201 (258)
T ss_dssp CHHHHHHHHHHHHHHC--CCCCEEEEESCGGGCCCCTTCEEEEEEE-----SSCGGGGHHHHHHHEEEEEEEEEEESCH-
T ss_pred CHHHHHHHHHHHHHhc--CCCCEEEEECchhhcCCCCCCcCEEEEC-----CcCHHHHHHHHHHhCCCCCEEEEEeCCH-
Confidence 5677777777631100 1256899999999888888999999983 233 578999999999999999998652
Q ss_pred CcccHHHHHHHHHHHHHHcCCcchhhhh
Q 024162 95 DKGDVDKAISALEGKLLLAGFLDAQRIQ 122 (271)
Q Consensus 95 ~~~e~~~~~~~l~~~l~laGF~~v~~~~ 122 (271)
.....+...+..+||..++..+
T Consensus 202 ------~~~~~~~~~l~~~gf~~~~~~~ 223 (258)
T 2pwy_A 202 ------TQVLELVRAAEAHPFRLERVLE 223 (258)
T ss_dssp ------HHHHHHHHHHTTTTEEEEEEEE
T ss_pred ------HHHHHHHHHHHHCCCceEEEEE
Confidence 1123455566679998776554
No 112
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=97.92 E-value=6.5e-06 Score=70.83 Aligned_cols=75 Identities=12% Similarity=0.034 Sum_probs=56.3
Q ss_pred cHHHHHHHHHHhCchhhhcCCCCeEEEeccCCCC-C--CCCCceeEEEeccccccCCh---------HHHHHHHHHhccC
Q 024162 15 PVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQL-P--VESFSIDTVLSISSSHELPG---------DQLLEEISRVLKP 82 (271)
Q Consensus 15 ~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~l-p--~~~~sfD~V~s~~~l~~~~~---------~~~L~ei~RvLKP 82 (271)
.+..|++.++++... ....++.++++|+..+ + +++++||.|++++...|... ..++++++|+|||
T Consensus 66 ~s~~~l~~a~~~~~~---~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~Lkp 142 (218)
T 3dxy_A 66 VHSPGVGACLASAHE---EGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQL 142 (218)
T ss_dssp SCHHHHHHHHHHHHH---TTCSSEEEECSCHHHHHHHHSCTTCEEEEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEE
T ss_pred ecHHHHHHHHHHHHH---hCCCcEEEEECCHHHHHHHHcCCCChheEEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCC
Confidence 367788888776421 1224689999998874 4 78999999999865544332 3699999999999
Q ss_pred CcEEEEEecC
Q 024162 83 GGTILIYKKL 92 (271)
Q Consensus 83 GG~l~i~~~~ 92 (271)
||+|++.+..
T Consensus 143 GG~l~i~td~ 152 (218)
T 3dxy_A 143 GGVFHMATDW 152 (218)
T ss_dssp EEEEEEEESC
T ss_pred CcEEEEEeCC
Confidence 9999998754
No 113
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=97.92 E-value=1.4e-05 Score=72.15 Aligned_cols=103 Identities=16% Similarity=0.163 Sum_probs=69.3
Q ss_pred HHHHHHHHHHhCch-hhhcCCCCeEEEeccCCCCCC--CCCceeEEEeccccccCCh-----HHHHHHHHHhccCCcEEE
Q 024162 16 VSAVLNAIRDLGDE-AVEQCDPQIITQASSLSQLPV--ESFSIDTVLSISSSHELPG-----DQLLEEISRVLKPGGTIL 87 (271)
Q Consensus 16 s~~mv~~ar~~~~~-~~~~~~~~v~~~~~d~e~lp~--~~~sfD~V~s~~~l~~~~~-----~~~L~ei~RvLKPGG~l~ 87 (271)
++.|++.++++... .......++.++.+|+..++. .+++||+|++....++.+. ..++++++|+|||||+|+
T Consensus 128 d~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv 207 (304)
T 3bwc_A 128 DGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICC 207 (304)
T ss_dssp CHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEEEEECC---------CCHHHHHHHHHHEEEEEEEE
T ss_pred CHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEE
Confidence 67888888887521 011234678999999887654 4789999999665444332 689999999999999999
Q ss_pred EEecCCCCcccHHHHHHHHHHHHHHcCCcchhhh
Q 024162 88 IYKKLTSDKGDVDKAISALEGKLLLAGFLDAQRI 121 (271)
Q Consensus 88 i~~~~~~~~~e~~~~~~~l~~~l~laGF~~v~~~ 121 (271)
+....... . ......+...+..+||..+...
T Consensus 208 ~~~~~~~~--~-~~~~~~~~~~l~~~GF~~v~~~ 238 (304)
T 3bwc_A 208 NQGESIWL--D-LELIEKMSRFIRETGFASVQYA 238 (304)
T ss_dssp EEECCTTT--C-HHHHHHHHHHHHHHTCSEEEEE
T ss_pred EecCCccc--c-hHHHHHHHHHHHhCCCCcEEEE
Confidence 98654211 1 1223466677888999876543
No 114
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=97.92 E-value=2.1e-05 Score=68.98 Aligned_cols=96 Identities=13% Similarity=0.005 Sum_probs=66.2
Q ss_pred cHHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCC---CCceeEEEeccccccCChHHHHHHHHHhccCCcEEEEEec
Q 024162 15 PVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVE---SFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYKK 91 (271)
Q Consensus 15 ~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~---~~sfD~V~s~~~l~~~~~~~~L~ei~RvLKPGG~l~i~~~ 91 (271)
.+..|++.+++..... ...+|.++++++++++.. +++||+|++.... +-..++.+++++|||||+|++...
T Consensus 112 ~s~~~~~~a~~~~~~~---~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s~a~~---~~~~ll~~~~~~LkpgG~l~~~~g 185 (249)
T 3g89_A 112 ATRKKVAFVERAIEVL---GLKGARALWGRAEVLAREAGHREAYARAVARAVA---PLCVLSELLLPFLEVGGAAVAMKG 185 (249)
T ss_dssp SCHHHHHHHHHHHHHH---TCSSEEEEECCHHHHTTSTTTTTCEEEEEEESSC---CHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred CCHHHHHHHHHHHHHh---CCCceEEEECcHHHhhcccccCCCceEEEECCcC---CHHHHHHHHHHHcCCCeEEEEEeC
Confidence 3677888888764221 113589999999988754 4899999996431 227899999999999999998774
Q ss_pred CCCCcccHHHHHHHHHHHHHHcCCcchhhh
Q 024162 92 LTSDKGDVDKAISALEGKLLLAGFLDAQRI 121 (271)
Q Consensus 92 ~~~~~~e~~~~~~~l~~~l~laGF~~v~~~ 121 (271)
.. . ......+...+...||...+..
T Consensus 186 ~~-~----~~e~~~~~~~l~~~G~~~~~~~ 210 (249)
T 3g89_A 186 PR-V----EEELAPLPPALERLGGRLGEVL 210 (249)
T ss_dssp SC-C----HHHHTTHHHHHHHHTEEEEEEE
T ss_pred CC-c----HHHHHHHHHHHHHcCCeEEEEE
Confidence 31 1 1122345566777898765543
No 115
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=97.91 E-value=3e-05 Score=67.40 Aligned_cols=78 Identities=17% Similarity=0.155 Sum_probs=55.0
Q ss_pred cHHHHHHHHHHhCchh--h-hcCCCCeEEEeccCCC-CC--CCCCceeEEEeccccccCC---------hHHHHHHHHHh
Q 024162 15 PVSAVLNAIRDLGDEA--V-EQCDPQIITQASSLSQ-LP--VESFSIDTVLSISSSHELP---------GDQLLEEISRV 79 (271)
Q Consensus 15 ~s~~mv~~ar~~~~~~--~-~~~~~~v~~~~~d~e~-lp--~~~~sfD~V~s~~~l~~~~---------~~~~L~ei~Rv 79 (271)
.++.|++.++++.... . .....++.++++++.. ++ +++++||.|++.+...|.. ...++++++|+
T Consensus 78 is~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~ 157 (235)
T 3ckk_A 78 IRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYV 157 (235)
T ss_dssp SCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCEEEEEEESCC-----------CCCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHH
Confidence 3677887777653210 0 0123579999999986 77 8899999999866544422 15799999999
Q ss_pred ccCCcEEEEEecC
Q 024162 80 LKPGGTILIYKKL 92 (271)
Q Consensus 80 LKPGG~l~i~~~~ 92 (271)
|||||.|++....
T Consensus 158 LkpGG~l~~~td~ 170 (235)
T 3ckk_A 158 LRVGGLVYTITDV 170 (235)
T ss_dssp EEEEEEEEEEESC
T ss_pred CCCCCEEEEEeCC
Confidence 9999999998654
No 116
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=97.90 E-value=1.5e-05 Score=70.35 Aligned_cols=90 Identities=17% Similarity=0.148 Sum_probs=64.9
Q ss_pred HHHHHHHHHHhCchhhhc-CCCCeEEEeccCCCCCCCCCceeEEEeccccccCCh-HHHHHHHHHhccCCcEEEEEecCC
Q 024162 16 VSAVLNAIRDLGDEAVEQ-CDPQIITQASSLSQLPVESFSIDTVLSISSSHELPG-DQLLEEISRVLKPGGTILIYKKLT 93 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~-~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~-~~~L~ei~RvLKPGG~l~i~~~~~ 93 (271)
++.+++.++++... . ...++.+.++|+.. ++++++||+|++. +++ ..+++++.++|||||+|++.+...
T Consensus 144 s~~~~~~a~~~~~~---~~g~~~v~~~~~d~~~-~~~~~~fD~Vi~~-----~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 214 (275)
T 1yb2_A 144 DEDNLKKAMDNLSE---FYDIGNVRTSRSDIAD-FISDQMYDAVIAD-----IPDPWNHVQKIASMMKPGSVATFYLPNF 214 (275)
T ss_dssp CHHHHHHHHHHHHT---TSCCTTEEEECSCTTT-CCCSCCEEEEEEC-----CSCGGGSHHHHHHTEEEEEEEEEEESSH
T ss_pred CHHHHHHHHHHHHh---cCCCCcEEEEECchhc-cCcCCCccEEEEc-----CcCHHHHHHHHHHHcCCCCEEEEEeCCH
Confidence 56777777776411 1 12468999999987 6778899999982 333 688999999999999999998652
Q ss_pred CCcccHHHHHHHHHHHHHHcCCcchhhh
Q 024162 94 SDKGDVDKAISALEGKLLLAGFLDAQRI 121 (271)
Q Consensus 94 ~~~~e~~~~~~~l~~~l~laGF~~v~~~ 121 (271)
.....+...+..+||..++..
T Consensus 215 -------~~~~~~~~~l~~~Gf~~~~~~ 235 (275)
T 1yb2_A 215 -------DQSEKTVLSLSASGMHHLETV 235 (275)
T ss_dssp -------HHHHHHHHHSGGGTEEEEEEE
T ss_pred -------HHHHHHHHHHHHCCCeEEEEE
Confidence 112345566777899876554
No 117
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=97.89 E-value=4.1e-05 Score=62.05 Aligned_cols=88 Identities=9% Similarity=-0.043 Sum_probs=58.4
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCC-CCCCCCCceeEEEeccccccCChHHHHHHHHHhccCCcEEEEEecCCC
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLS-QLPVESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYKKLTS 94 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e-~lp~~~~sfD~V~s~~~l~~~~~~~~L~ei~RvLKPGG~l~i~~~~~~ 94 (271)
++.|++.++++.... ....++ ++.+++. .++...++||+|++...+++ ..++++++|+|||||+|++.....
T Consensus 58 ~~~~~~~a~~~~~~~--~~~~~~-~~~~d~~~~~~~~~~~~D~i~~~~~~~~---~~~l~~~~~~L~~gG~l~~~~~~~- 130 (178)
T 3hm2_A 58 SEERRERILSNAINL--GVSDRI-AVQQGAPRAFDDVPDNPDVIFIGGGLTA---PGVFAAAWKRLPVGGRLVANAVTV- 130 (178)
T ss_dssp CHHHHHHHHHHHHTT--TCTTSE-EEECCTTGGGGGCCSCCSEEEECC-TTC---TTHHHHHHHTCCTTCEEEEEECSH-
T ss_pred CHHHHHHHHHHHHHh--CCCCCE-EEecchHhhhhccCCCCCEEEECCcccH---HHHHHHHHHhcCCCCEEEEEeecc-
Confidence 567888888764211 111257 7777774 44443389999999887776 678999999999999999988652
Q ss_pred CcccHHHHHHHHHHHHHHcCCc
Q 024162 95 DKGDVDKAISALEGKLLLAGFL 116 (271)
Q Consensus 95 ~~~e~~~~~~~l~~~l~laGF~ 116 (271)
.....+...+...|+.
T Consensus 131 ------~~~~~~~~~~~~~~~~ 146 (178)
T 3hm2_A 131 ------ESEQMLWALRKQFGGT 146 (178)
T ss_dssp ------HHHHHHHHHHHHHCCE
T ss_pred ------ccHHHHHHHHHHcCCe
Confidence 1112344455566654
No 118
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=97.86 E-value=9e-05 Score=64.69 Aligned_cols=95 Identities=11% Similarity=0.038 Sum_probs=64.1
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCC--CCCCceeEEEeccccccC--------------------Ch-HHH
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLP--VESFSIDTVLSISSSHEL--------------------PG-DQL 72 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp--~~~~sfD~V~s~~~l~~~--------------------~~-~~~ 72 (271)
++.|++.+++..... ....++.++++|+.+++ ++.++||+|+++..++.. .+ ..+
T Consensus 81 ~~~~~~~a~~n~~~~--~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 158 (259)
T 3lpm_A 81 QERLADMAKRSVAYN--QLEDQIEIIEYDLKKITDLIPKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDT 158 (259)
T ss_dssp SHHHHHHHHHHHHHT--TCTTTEEEECSCGGGGGGTSCTTCEEEEEECCCC-----------------------HHHHHH
T ss_pred CHHHHHHHHHHHHHC--CCcccEEEEECcHHHhhhhhccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHH
Confidence 567778887764211 12236899999998876 568899999996443222 11 579
Q ss_pred HHHHHHhccCCcEEEEEecCCCCcccHHHHHHHHHHHHHHcCCcchhh
Q 024162 73 LEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQR 120 (271)
Q Consensus 73 L~ei~RvLKPGG~l~i~~~~~~~~~e~~~~~~~l~~~l~laGF~~v~~ 120 (271)
++++.++|||||+|++..... ... .+...+...||.....
T Consensus 159 l~~~~~~LkpgG~l~~~~~~~----~~~----~~~~~l~~~~~~~~~~ 198 (259)
T 3lpm_A 159 IRVAASLLKQGGKANFVHRPE----RLL----DIIDIMRKYRLEPKRI 198 (259)
T ss_dssp HHHHHHHEEEEEEEEEEECTT----THH----HHHHHHHHTTEEEEEE
T ss_pred HHHHHHHccCCcEEEEEEcHH----HHH----HHHHHHHHCCCceEEE
Confidence 999999999999999975431 222 4455677778876543
No 119
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=97.85 E-value=2.9e-05 Score=66.83 Aligned_cols=72 Identities=17% Similarity=0.222 Sum_probs=55.4
Q ss_pred cHHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEecc-ccccCCh---HHHHHHHHHhccCCcEEEEEe
Q 024162 15 PVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSIS-SSHELPG---DQLLEEISRVLKPGGTILIYK 90 (271)
Q Consensus 15 ~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~-~l~~~~~---~~~L~ei~RvLKPGG~l~i~~ 90 (271)
.++.|++.++++... .+.++.++++++.+++++ ++||+|++.. .+++++. ..++++++++|||||.|++..
T Consensus 71 ~s~~~l~~a~~~~~~----~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 71 LHEEMLRVARRKAKE----RNLKIEFLQGDVLEIAFK-NEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITDF 145 (252)
T ss_dssp SCHHHHHHHHHHHHH----TTCCCEEEESCGGGCCCC-SCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHh----cCCceEEEECChhhcccC-CCccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEec
Confidence 367888888887421 224689999999998875 6899999864 4455542 789999999999999998865
Q ss_pred c
Q 024162 91 K 91 (271)
Q Consensus 91 ~ 91 (271)
+
T Consensus 146 ~ 146 (252)
T 1wzn_A 146 P 146 (252)
T ss_dssp E
T ss_pred c
Confidence 4
No 120
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=97.85 E-value=3.4e-05 Score=78.70 Aligned_cols=76 Identities=7% Similarity=0.037 Sum_probs=61.0
Q ss_pred HHHHHHHHHHhCchhh---hcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCCh---HHHHHHHHHhccCCcEEEEE
Q 024162 16 VSAVLNAIRDLGDEAV---EQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPG---DQLLEEISRVLKPGGTILIY 89 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~---~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~---~~~L~ei~RvLKPGG~l~i~ 89 (271)
++.|++.|+++.+... .....++.++++|+..+++.+++||+|++..+++|+++ ..++++++|+|||| .+++.
T Consensus 755 S~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIIS 833 (950)
T 3htx_A 755 SPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVS 833 (950)
T ss_dssp CHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTTSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEE
T ss_pred CHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEE
Confidence 6788888887532110 11224799999999999999999999999999999987 35899999999999 88888
Q ss_pred ecC
Q 024162 90 KKL 92 (271)
Q Consensus 90 ~~~ 92 (271)
++.
T Consensus 834 TPN 836 (950)
T 3htx_A 834 TPN 836 (950)
T ss_dssp ECB
T ss_pred ecC
Confidence 765
No 121
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=97.85 E-value=2e-05 Score=70.80 Aligned_cols=76 Identities=11% Similarity=0.048 Sum_probs=58.6
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCC------CCCCcee-----EEEeccccccCCh----HHHHHHHHHhc
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLP------VESFSID-----TVLSISSSHELPG----DQLLEEISRVL 80 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp------~~~~sfD-----~V~s~~~l~~~~~----~~~L~ei~RvL 80 (271)
++.|++.+|++... ....++.|+++|+.+++ ...++|| +|+++.++||+++ ..++++++++|
T Consensus 114 sp~mLa~Ar~~l~~---~~~~~~~~v~aD~~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L 190 (277)
T 3giw_A 114 DPIVLTLSQGLLAS---TPEGRTAYVEADMLDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPL 190 (277)
T ss_dssp CHHHHHTTHHHHCC---CSSSEEEEEECCTTCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTS
T ss_pred ChHHHHHHHHHhcc---CCCCcEEEEEecccChhhhhcccccccccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhC
Confidence 67899999887421 11246899999998862 1135566 6888999999987 47999999999
Q ss_pred cCCcEEEEEecCCC
Q 024162 81 KPGGTILIYKKLTS 94 (271)
Q Consensus 81 KPGG~l~i~~~~~~ 94 (271)
+|||+|++++....
T Consensus 191 ~PGG~Lvls~~~~d 204 (277)
T 3giw_A 191 PSGSYLAMSIGTAE 204 (277)
T ss_dssp CTTCEEEEEEECCT
T ss_pred CCCcEEEEEeccCC
Confidence 99999999987653
No 122
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=97.83 E-value=1.7e-05 Score=65.66 Aligned_cols=75 Identities=11% Similarity=0.054 Sum_probs=58.4
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCC--CCCCceeEEEeccccccC-Ch-HHHHHHHHH--hccCCcEEEEE
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLP--VESFSIDTVLSISSSHEL-PG-DQLLEEISR--VLKPGGTILIY 89 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp--~~~~sfD~V~s~~~l~~~-~~-~~~L~ei~R--vLKPGG~l~i~ 89 (271)
++.|++.++++.... ...++.++++|+.+++ +++++||+|++...+++. .. ..++.++.+ +|||||+|++.
T Consensus 76 ~~~~~~~a~~~~~~~---~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~~p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~ 152 (189)
T 3p9n_A 76 DQRSAAVIARNIEAL---GLSGATLRRGAVAAVVAAGTTSPVDLVLADPPYNVDSADVDAILAALGTNGWTREGTVAVVE 152 (189)
T ss_dssp CHHHHHHHHHHHHHH---TCSCEEEEESCHHHHHHHCCSSCCSEEEECCCTTSCHHHHHHHHHHHHHSSSCCTTCEEEEE
T ss_pred CHHHHHHHHHHHHHc---CCCceEEEEccHHHHHhhccCCCccEEEECCCCCcchhhHHHHHHHHHhcCccCCCeEEEEE
Confidence 578888888774221 1146899999998764 457899999998877765 34 889999999 99999999998
Q ss_pred ecCC
Q 024162 90 KKLT 93 (271)
Q Consensus 90 ~~~~ 93 (271)
....
T Consensus 153 ~~~~ 156 (189)
T 3p9n_A 153 RATT 156 (189)
T ss_dssp EETT
T ss_pred ecCC
Confidence 7653
No 123
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=97.81 E-value=6.5e-06 Score=77.81 Aligned_cols=56 Identities=18% Similarity=0.136 Sum_probs=49.0
Q ss_pred CCeEEEeccCCCCCCC------CCceeEEEeccccccCCh-HHHHHHHHHhccCCcEEEEEecC
Q 024162 36 PQIITQASSLSQLPVE------SFSIDTVLSISSSHELPG-DQLLEEISRVLKPGGTILIYKKL 92 (271)
Q Consensus 36 ~~v~~~~~d~e~lp~~------~~sfD~V~s~~~l~~~~~-~~~L~ei~RvLKPGG~l~i~~~~ 92 (271)
.+|.|+++|+.++|+. +++||+|++.. .|++.+ ..+|++++|+|||||+|++.++.
T Consensus 264 ~rI~fv~GDa~dlpf~~~l~~~d~sFDlVisdg-sH~~~d~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 264 LRIRTIQGDQNDAEFLDRIARRYGPFDIVIDDG-SHINAHVRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp TTEEEEECCTTCHHHHHHHHHHHCCEEEEEECS-CCCHHHHHHHHHHHGGGEEEEEEEEEECGG
T ss_pred CCcEEEEecccccchhhhhhcccCCccEEEECC-cccchhHHHHHHHHHHhcCCCeEEEEEecc
Confidence 5799999999999987 78999999864 455555 88999999999999999999875
No 124
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=97.80 E-value=3.3e-05 Score=61.77 Aligned_cols=58 Identities=17% Similarity=0.139 Sum_probs=49.0
Q ss_pred CCeEEEeccCCCCC--------CCCCceeEEEeccccccCCh------------HHHHHHHHHhccCCcEEEEEecCC
Q 024162 36 PQIITQASSLSQLP--------VESFSIDTVLSISSSHELPG------------DQLLEEISRVLKPGGTILIYKKLT 93 (271)
Q Consensus 36 ~~v~~~~~d~e~lp--------~~~~sfD~V~s~~~l~~~~~------------~~~L~ei~RvLKPGG~l~i~~~~~ 93 (271)
.++.+.++++.+.+ +++++||+|++...+++... ..++++++++|||||++++..+..
T Consensus 62 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 139 (180)
T 1ej0_A 62 VGVDFLQGDFRDELVMKALLERVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQG 139 (180)
T ss_dssp TTEEEEESCTTSHHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESS
T ss_pred CcEEEEEcccccchhhhhhhccCCCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecC
Confidence 45788899998887 78889999999887776643 488999999999999999988764
No 125
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=97.79 E-value=4.6e-05 Score=65.91 Aligned_cols=93 Identities=18% Similarity=0.258 Sum_probs=66.0
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCChHHHHHHHHHhccCCcEEEEEecCCCC
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYKKLTSD 95 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~~~~L~ei~RvLKPGG~l~i~~~~~~~ 95 (271)
++.|++.++++.... ....++.+.++|+.+. +++++||+|++... ....++++++++|||||++++.....
T Consensus 127 ~~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~-~~~~~~D~v~~~~~----~~~~~l~~~~~~L~~gG~l~~~~~~~-- 197 (255)
T 3mb5_A 127 REDFAKLAWENIKWA--GFDDRVTIKLKDIYEG-IEEENVDHVILDLP----QPERVVEHAAKALKPGGFFVAYTPCS-- 197 (255)
T ss_dssp CHHHHHHHHHHHHHH--TCTTTEEEECSCGGGC-CCCCSEEEEEECSS----CGGGGHHHHHHHEEEEEEEEEEESSH--
T ss_pred CHHHHHHHHHHHHHc--CCCCceEEEECchhhc-cCCCCcCEEEECCC----CHHHHHHHHHHHcCCCCEEEEEECCH--
Confidence 567777777764211 1123489999999854 77889999998421 22678999999999999999987652
Q ss_pred cccHHHHHHHHHHHHHHcC--Ccchhhhh
Q 024162 96 KGDVDKAISALEGKLLLAG--FLDAQRIQ 122 (271)
Q Consensus 96 ~~e~~~~~~~l~~~l~laG--F~~v~~~~ 122 (271)
...+.+...+..+| |..++..+
T Consensus 198 -----~~~~~~~~~l~~~g~~f~~~~~~e 221 (255)
T 3mb5_A 198 -----NQVMRLHEKLREFKDYFMKPRTIN 221 (255)
T ss_dssp -----HHHHHHHHHHHHTGGGBSCCEEEC
T ss_pred -----HHHHHHHHHHHHcCCCccccEEEE
Confidence 12235566788899 98876654
No 126
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=97.78 E-value=0.00013 Score=61.73 Aligned_cols=88 Identities=11% Similarity=-0.003 Sum_probs=61.3
Q ss_pred HHHHHHHHHHhCchhhhcCCC-CeEEEeccCCCCCCCCCceeEEEeccccccCChHHHHHHHHHhccCCcEEEEEecCCC
Q 024162 16 VSAVLNAIRDLGDEAVEQCDP-QIITQASSLSQLPVESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYKKLTS 94 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~-~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~~~~L~ei~RvLKPGG~l~i~~~~~~ 94 (271)
++.|++.++++.... ... ++.++++++.+.......||+|++...+ ... ++++++|+|||||+|++.....
T Consensus 86 s~~~~~~a~~~~~~~---g~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~~---~~~-~l~~~~~~LkpgG~lv~~~~~~- 157 (204)
T 3njr_A 86 RADRIENIQKNIDTY---GLSPRMRAVQGTAPAALADLPLPEAVFIGGGG---SQA-LYDRLWEWLAPGTRIVANAVTL- 157 (204)
T ss_dssp CHHHHHHHHHHHHHT---TCTTTEEEEESCTTGGGTTSCCCSEEEECSCC---CHH-HHHHHHHHSCTTCEEEEEECSH-
T ss_pred CHHHHHHHHHHHHHc---CCCCCEEEEeCchhhhcccCCCCCEEEECCcc---cHH-HHHHHHHhcCCCcEEEEEecCc-
Confidence 578888888764211 113 6899999998743334679999986533 335 9999999999999999988652
Q ss_pred CcccHHHHHHHHHHHHHHcCCcc
Q 024162 95 DKGDVDKAISALEGKLLLAGFLD 117 (271)
Q Consensus 95 ~~~e~~~~~~~l~~~l~laGF~~ 117 (271)
.....+...+...||..
T Consensus 158 ------~~~~~~~~~l~~~g~~i 174 (204)
T 3njr_A 158 ------ESETLLTQLHARHGGQL 174 (204)
T ss_dssp ------HHHHHHHHHHHHHCSEE
T ss_pred ------ccHHHHHHHHHhCCCcE
Confidence 12234556677777554
No 127
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=97.78 E-value=3.3e-05 Score=70.64 Aligned_cols=53 Identities=15% Similarity=0.258 Sum_probs=46.6
Q ss_pred CeEEEeccCCCCCCCCCceeEEEeccccccCCh-H--HHHHHHHHhccC---CcEEEEEecC
Q 024162 37 QIITQASSLSQLPVESFSIDTVLSISSSHELPG-D--QLLEEISRVLKP---GGTILIYKKL 92 (271)
Q Consensus 37 ~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~-~--~~L~ei~RvLKP---GG~l~i~~~~ 92 (271)
++.++.+|+.. +++. ||+|++..++|++++ . .+|++++|+||| ||+|++.+..
T Consensus 232 ~v~~~~~d~~~-~~p~--~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~ 290 (352)
T 1fp2_A 232 NLTYVGGDMFT-SIPN--ADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMV 290 (352)
T ss_dssp TEEEEECCTTT-CCCC--CSEEEEESCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECE
T ss_pred CcEEEeccccC-CCCC--ccEEEeehhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEee
Confidence 48999999966 6653 999999999999987 4 899999999999 9999999864
No 128
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=97.77 E-value=7e-05 Score=62.05 Aligned_cols=76 Identities=11% Similarity=0.071 Sum_probs=55.2
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCC-CCCCceeEEEecccc-----ccC-C---h-HHHHHHHHHhccCCc
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLP-VESFSIDTVLSISSS-----HEL-P---G-DQLLEEISRVLKPGG 84 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp-~~~~sfD~V~s~~~l-----~~~-~---~-~~~L~ei~RvLKPGG 84 (271)
++.|++.++++.... ....++.++++|++.++ +.+++||+|++...+ +++ . + ..+++++.|+|||||
T Consensus 56 s~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG 133 (197)
T 3eey_A 56 QDKAIANTTKKLTDL--NLIDRVTLIKDGHQNMDKYIDCPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGG 133 (197)
T ss_dssp CHHHHHHHHHHHHHT--TCGGGEEEECSCGGGGGGTCCSCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEE
T ss_pred CHHHHHHHHHHHHHc--CCCCCeEEEECCHHHHhhhccCCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCC
Confidence 567788887764211 01146899999998886 667899999986543 111 1 2 579999999999999
Q ss_pred EEEEEecCC
Q 024162 85 TILIYKKLT 93 (271)
Q Consensus 85 ~l~i~~~~~ 93 (271)
++++..+..
T Consensus 134 ~l~~~~~~~ 142 (197)
T 3eey_A 134 IITVVIYYG 142 (197)
T ss_dssp EEEEEECCB
T ss_pred EEEEEEccC
Confidence 999998653
No 129
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=97.76 E-value=4.2e-05 Score=64.09 Aligned_cols=69 Identities=13% Similarity=0.083 Sum_probs=55.4
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCChHHHHHHHHHhccCCcEEEEEecC
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYKKL 92 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~~~~L~ei~RvLKPGG~l~i~~~~ 92 (271)
++.|++.++++... ....++.+..+++...+...++||+|++...++++++ +++++|||||+|++....
T Consensus 108 ~~~~~~~a~~~~~~---~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~~~~~~~~-----~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 108 IKGLQWQARRRLKN---LDLHNVSTRHGDGWQGWQARAPFDAIIVTAAPPEIPT-----ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp CHHHHHHHHHHHHH---TTCCSEEEEESCGGGCCGGGCCEEEEEESSBCSSCCT-----HHHHTEEEEEEEEEEECS
T ss_pred CHHHHHHHHHHHHH---cCCCceEEEECCcccCCccCCCccEEEEccchhhhhH-----HHHHhcccCcEEEEEEcC
Confidence 57888888876421 1124689999999887777889999999988888864 689999999999998765
No 130
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=97.76 E-value=6.2e-05 Score=61.27 Aligned_cols=93 Identities=19% Similarity=0.180 Sum_probs=64.1
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCC-CceeEEEeccccccCChHHHHHHHHHhccCCcEEEEEecCCC
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVES-FSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYKKLTS 94 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~-~sfD~V~s~~~l~~~~~~~~L~ei~RvLKPGG~l~i~~~~~~ 94 (271)
++.+++.++++.... ....++.+..+++.. +++. ++||+|++...++++ ..++++++++|+|||++++.....
T Consensus 64 ~~~~~~~a~~~~~~~--~~~~~~~~~~~d~~~-~~~~~~~~D~v~~~~~~~~~--~~~l~~~~~~l~~gG~l~~~~~~~- 137 (192)
T 1l3i_A 64 NPEAISTTEMNLQRH--GLGDNVTLMEGDAPE-ALCKIPDIDIAVVGGSGGEL--QEILRIIKDKLKPGGRIIVTAILL- 137 (192)
T ss_dssp CHHHHHHHHHHHHHT--TCCTTEEEEESCHHH-HHTTSCCEEEEEESCCTTCH--HHHHHHHHHTEEEEEEEEEEECBH-
T ss_pred CHHHHHHHHHHHHHc--CCCcceEEEecCHHH-hcccCCCCCEEEECCchHHH--HHHHHHHHHhcCCCcEEEEEecCc-
Confidence 567777777753211 111468888888866 3333 589999997665432 789999999999999999988652
Q ss_pred CcccHHHHHHHHHHHHHHcCCcchhhh
Q 024162 95 DKGDVDKAISALEGKLLLAGFLDAQRI 121 (271)
Q Consensus 95 ~~~e~~~~~~~l~~~l~laGF~~v~~~ 121 (271)
.....+...+...|| .++..
T Consensus 138 ------~~~~~~~~~l~~~g~-~~~~~ 157 (192)
T 1l3i_A 138 ------ETKFEAMECLRDLGF-DVNIT 157 (192)
T ss_dssp ------HHHHHHHHHHHHTTC-CCEEE
T ss_pred ------chHHHHHHHHHHCCC-ceEEE
Confidence 122355667888999 54443
No 131
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=97.75 E-value=6.5e-05 Score=65.80 Aligned_cols=92 Identities=16% Similarity=0.105 Sum_probs=62.3
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCChHHHHHHHHHhccCCcEEEEEecCCCC
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYKKLTSD 95 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~~~~L~ei~RvLKPGG~l~i~~~~~~~ 95 (271)
++.+++.++++... .+..+.+.++++... +++++||+|+++...++ -..++.+++++|||||+|+++.....
T Consensus 151 ~~~~v~~a~~n~~~----~~~~v~~~~~d~~~~-~~~~~fD~Vv~n~~~~~--~~~~l~~~~~~LkpgG~lils~~~~~- 222 (254)
T 2nxc_A 151 DPMVLPQAEANAKR----NGVRPRFLEGSLEAA-LPFGPFDLLVANLYAEL--HAALAPRYREALVPGGRALLTGILKD- 222 (254)
T ss_dssp CGGGHHHHHHHHHH----TTCCCEEEESCHHHH-GGGCCEEEEEEECCHHH--HHHHHHHHHHHEEEEEEEEEEEEEGG-
T ss_pred CHHHHHHHHHHHHH----cCCcEEEEECChhhc-CcCCCCCEEEECCcHHH--HHHHHHHHHHHcCCCCEEEEEeeccC-
Confidence 34555666655311 112278888887652 55679999998654332 26889999999999999999876521
Q ss_pred cccHHHHHHHHHHHHHHcCCcchhhh
Q 024162 96 KGDVDKAISALEGKLLLAGFLDAQRI 121 (271)
Q Consensus 96 ~~e~~~~~~~l~~~l~laGF~~v~~~ 121 (271)
. ...+...+..+||..++..
T Consensus 223 --~----~~~v~~~l~~~Gf~~~~~~ 242 (254)
T 2nxc_A 223 --R----APLVREAMAGAGFRPLEEA 242 (254)
T ss_dssp --G----HHHHHHHHHHTTCEEEEEE
T ss_pred --C----HHHHHHHHHHCCCEEEEEe
Confidence 1 2356677888999876554
No 132
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=97.74 E-value=6.3e-05 Score=65.91 Aligned_cols=96 Identities=16% Similarity=0.145 Sum_probs=65.2
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCChHHHHHHHHHhccCCcEEEEEecCCCC
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYKKLTSD 95 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~~~~L~ei~RvLKPGG~l~i~~~~~~~ 95 (271)
++.+++.+++...........++.++++|+.+.++++++||+|++... ....++.++.++|||||+|++.....
T Consensus 133 ~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~----~~~~~l~~~~~~L~pgG~l~~~~~~~-- 206 (280)
T 1i9g_A 133 RADHAEHARRNVSGCYGQPPDNWRLVVSDLADSELPDGSVDRAVLDML----APWEVLDAVSRLLVAGGVLMVYVATV-- 206 (280)
T ss_dssp CHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCCCTTCEEEEEEESS----CGGGGHHHHHHHEEEEEEEEEEESSH--
T ss_pred CHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCCCCCceeEEEECCc----CHHHHHHHHHHhCCCCCEEEEEeCCH--
Confidence 567777777763210000125689999999998888889999998322 22578999999999999999998652
Q ss_pred cccHHHHHHHHHHHHHH-cCCcchhhhh
Q 024162 96 KGDVDKAISALEGKLLL-AGFLDAQRIQ 122 (271)
Q Consensus 96 ~~e~~~~~~~l~~~l~l-aGF~~v~~~~ 122 (271)
.. ...+...+.. .||..++.++
T Consensus 207 -~~----~~~~~~~l~~~~~f~~~~~~~ 229 (280)
T 1i9g_A 207 -TQ----LSRIVEALRAKQCWTEPRAWE 229 (280)
T ss_dssp -HH----HHHHHHHHHHHSSBCCCEEEC
T ss_pred -HH----HHHHHHHHHhcCCcCCcEEEE
Confidence 11 1233344444 7898765553
No 133
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=97.73 E-value=3.7e-05 Score=70.85 Aligned_cols=54 Identities=17% Similarity=0.314 Sum_probs=47.6
Q ss_pred CCeEEEeccCCCCCCCCCceeEEEeccccccCCh-H--HHHHHHHHhccCCcEEEEEecC
Q 024162 36 PQIITQASSLSQLPVESFSIDTVLSISSSHELPG-D--QLLEEISRVLKPGGTILIYKKL 92 (271)
Q Consensus 36 ~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~-~--~~L~ei~RvLKPGG~l~i~~~~ 92 (271)
.++.++.+|+.. +++. ||+|++..++|++++ . .+|++++|+|||||+|++.+..
T Consensus 252 ~~v~~~~~d~~~-~~~~--~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~ 308 (372)
T 1fp1_D 252 SGIEHVGGDMFA-SVPQ--GDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFI 308 (372)
T ss_dssp TTEEEEECCTTT-CCCC--EEEEEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred CCCEEEeCCccc-CCCC--CCEEEEecccccCCHHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 458999999987 7765 999999999999987 4 8999999999999999998754
No 134
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=97.72 E-value=0.00029 Score=61.49 Aligned_cols=119 Identities=18% Similarity=0.059 Sum_probs=71.1
Q ss_pred cEEEEecCCcccHHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCC---CCCCceeEEEeccccccCCh-HH-HHHHHHH
Q 024162 4 AVLALSEDKILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLP---VESFSIDTVLSISSSHELPG-DQ-LLEEISR 78 (271)
Q Consensus 4 ~vl~~td~~~~~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp---~~~~sfD~V~s~~~l~~~~~-~~-~L~ei~R 78 (271)
+.++..|.+....+.+++.++++ .++.++++|+.... ...++||+|++..+. ++ .. ++..+.+
T Consensus 102 G~V~avD~s~~~l~~l~~~a~~r---------~nv~~i~~Da~~~~~~~~~~~~~D~I~~d~a~---~~~~~il~~~~~~ 169 (232)
T 3id6_C 102 GKAYGVEFSPRVVRELLLVAQRR---------PNIFPLLADARFPQSYKSVVENVDVLYVDIAQ---PDQTDIAIYNAKF 169 (232)
T ss_dssp SEEEEEECCHHHHHHHHHHHHHC---------TTEEEEECCTTCGGGTTTTCCCEEEEEECCCC---TTHHHHHHHHHHH
T ss_pred CEEEEEECcHHHHHHHHHHhhhc---------CCeEEEEcccccchhhhccccceEEEEecCCC---hhHHHHHHHHHHH
Confidence 45666776655555555555433 46888999987643 124689999987543 33 34 4455666
Q ss_pred hccCCcEEEEEecCCC---C--cccHHHHHHHHHHHHHHcCCcchhhhhhccccCcceeEEEEEeeC
Q 024162 79 VLKPGGTILIYKKLTS---D--KGDVDKAISALEGKLLLAGFLDAQRIQLKSVVPAEVVSFGVKGKK 140 (271)
Q Consensus 79 vLKPGG~l~i~~~~~~---~--~~e~~~~~~~l~~~l~laGF~~v~~~~~~~~~~~~~~~~~i~a~K 140 (271)
+|||||+|+++..... + ..+. .+.....|..+||..++.....|+.. .++.+.+++
T Consensus 170 ~LkpGG~lvisik~~~~d~t~~~~e~---~~~~~~~L~~~gf~~~~~~~l~p~~~---~h~~v~~~~ 230 (232)
T 3id6_C 170 FLKVNGDMLLVIKARSIDVTKDPKEI---YKTEVEKLENSNFETIQIINLDPYDK---DHAIVLSKY 230 (232)
T ss_dssp HEEEEEEEEEEEC-------CCSSSS---TTHHHHHHHHTTEEEEEEEECTTTCS---SCEEEEEEE
T ss_pred hCCCCeEEEEEEccCCcccCCCHHHH---HHHHHHHHHHCCCEEEEEeccCCCcC---ceEEEEEEe
Confidence 9999999998843211 0 0111 12344567778998877765544322 345566655
No 135
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=97.70 E-value=8.4e-05 Score=65.52 Aligned_cols=94 Identities=15% Similarity=0.214 Sum_probs=64.1
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEecccccc-------------CC------------h-
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHE-------------LP------------G- 69 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~-------------~~------------~- 69 (271)
++.|++.+++..... ...++.++++++.. ++++++||+|+++..++. .+ .
T Consensus 142 s~~~l~~a~~n~~~~---~~~~v~~~~~d~~~-~~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~ 217 (276)
T 2b3t_A 142 MPDAVSLAQRNAQHL---AIKNIHILQSDWFS-ALAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADI 217 (276)
T ss_dssp SHHHHHHHHHHHHHH---TCCSEEEECCSTTG-GGTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHH
T ss_pred CHHHHHHHHHHHHHc---CCCceEEEEcchhh-hcccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHH
Confidence 577788887764211 11368999999876 355679999999743322 11 2
Q ss_pred HHHHHHHHHhccCCcEEEEEecCCCCcccHHHHHHHHHHHHHHcCCcchhhh
Q 024162 70 DQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQRI 121 (271)
Q Consensus 70 ~~~L~ei~RvLKPGG~l~i~~~~~~~~~e~~~~~~~l~~~l~laGF~~v~~~ 121 (271)
..++.++.++|||||++++..... .. ..+...+..+||..++..
T Consensus 218 ~~~l~~~~~~LkpgG~l~~~~~~~----~~----~~~~~~l~~~Gf~~v~~~ 261 (276)
T 2b3t_A 218 VHIIEQSRNALVSGGFLLLEHGWQ----QG----EAVRQAFILAGYHDVETC 261 (276)
T ss_dssp HHHHHHHGGGEEEEEEEEEECCSS----CH----HHHHHHHHHTTCTTCCEE
T ss_pred HHHHHHHHHhcCCCCEEEEEECch----HH----HHHHHHHHHCCCcEEEEE
Confidence 678899999999999999975432 11 245566778999876543
No 136
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=97.69 E-value=9.4e-05 Score=69.09 Aligned_cols=73 Identities=14% Similarity=0.161 Sum_probs=59.1
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEecccccc-----CCh-HHHHHHHHHhccCCcEEEEE
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHE-----LPG-DQLLEEISRVLKPGGTILIY 89 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~-----~~~-~~~L~ei~RvLKPGG~l~i~ 89 (271)
++.|++.+++.... .+..+.++++|+.+.+.++++||+|+++..+|+ ... ..++++++++|||||+|++.
T Consensus 264 s~~al~~A~~n~~~----~~~~v~~~~~D~~~~~~~~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv 339 (381)
T 3dmg_A 264 DLASVLSLQKGLEA----NALKAQALHSDVDEALTEEARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLV 339 (381)
T ss_dssp BHHHHHHHHHHHHH----TTCCCEEEECSTTTTSCTTCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CHHHHHHHHHHHHH----cCCCeEEEEcchhhccccCCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEE
Confidence 67888888877421 224588999999998887789999999888877 223 78999999999999999998
Q ss_pred ecC
Q 024162 90 KKL 92 (271)
Q Consensus 90 ~~~ 92 (271)
...
T Consensus 340 ~n~ 342 (381)
T 3dmg_A 340 SNP 342 (381)
T ss_dssp ECT
T ss_pred EcC
Confidence 765
No 137
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=97.68 E-value=0.00013 Score=66.97 Aligned_cols=69 Identities=13% Similarity=0.146 Sum_probs=52.3
Q ss_pred HHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccC---Ch-HHHHHHHHHhccCCcEEEEE
Q 024162 19 VLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHEL---PG-DQLLEEISRVLKPGGTILIY 89 (271)
Q Consensus 19 mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~---~~-~~~L~ei~RvLKPGG~l~i~ 89 (271)
|++.++++.... ....++.+++++++++++++++||+|++....+++ .. ..++.++.|+|||||+|+..
T Consensus 100 ~l~~a~~~~~~~--~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 100 ISDYAVKIVKAN--KLDHVVTIIKGKVEEVELPVEKVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp HHHHHHHHHHHT--TCTTTEEEEESCTTTCCCSSSCEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred HHHHHHHHHHHc--CCCCcEEEEECcHHHccCCCCceEEEEEccccccccCchhHHHHHHHHHHhCCCCCEEccc
Confidence 777777764211 12245899999999999999999999996543333 33 88999999999999999743
No 138
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=97.66 E-value=8.5e-05 Score=68.02 Aligned_cols=54 Identities=15% Similarity=0.232 Sum_probs=47.5
Q ss_pred CCeEEEeccCCCCCCCCCceeEEEeccccccCCh-H--HHHHHHHHhccC---CcEEEEEecC
Q 024162 36 PQIITQASSLSQLPVESFSIDTVLSISSSHELPG-D--QLLEEISRVLKP---GGTILIYKKL 92 (271)
Q Consensus 36 ~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~-~--~~L~ei~RvLKP---GG~l~i~~~~ 92 (271)
.++.++.+|+.. +++ .||+|++..++|++++ . .+|++++|+||| ||+|++.+..
T Consensus 236 ~~v~~~~~d~~~-~~~--~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~ 295 (358)
T 1zg3_A 236 ENLNFVGGDMFK-SIP--SADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDIS 295 (358)
T ss_dssp SSEEEEECCTTT-CCC--CCSEEEEESCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECE
T ss_pred CCcEEEeCccCC-CCC--CceEEEEcccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEec
Confidence 348999999987 776 4999999999999987 4 899999999999 9999998864
No 139
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=97.60 E-value=0.00017 Score=66.67 Aligned_cols=96 Identities=13% Similarity=0.023 Sum_probs=62.6
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCC-CCC-CCCceeEEEeccccccCChHHHHHHHHHhccCCcEE-EEEecC
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQ-LPV-ESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTI-LIYKKL 92 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~-lp~-~~~sfD~V~s~~~l~~~~~~~~L~ei~RvLKPGG~l-~i~~~~ 92 (271)
++.|++.++++.... .. .++.++++|+.. +|. .+++||+|++...++......++++++|+|||||++ ++....
T Consensus 204 ~~~~l~~a~~~~~~~--g~-~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~p~~~~~~~~~l~~~~~~LkpgG~~~~~~~~~ 280 (373)
T 2qm3_A 204 DERLTKFIEKAANEI--GY-EDIEIFTFDLRKPLPDYALHKFDTFITDPPETLEAIRAFVGRGIATLKGPRCAGYFGITR 280 (373)
T ss_dssp CHHHHHHHHHHHHHH--TC-CCEEEECCCTTSCCCTTTSSCBSEEEECCCSSHHHHHHHHHHHHHTBCSTTCEEEEEECT
T ss_pred CHHHHHHHHHHHHHc--CC-CCEEEEEChhhhhchhhccCCccEEEECCCCchHHHHHHHHHHHHHcccCCeEEEEEEec
Confidence 578888888874221 11 268999999988 774 457899999976654443488999999999999955 444433
Q ss_pred CCCcccHHHHHHHHHHHHH-HcCCcc
Q 024162 93 TSDKGDVDKAISALEGKLL-LAGFLD 117 (271)
Q Consensus 93 ~~~~~e~~~~~~~l~~~l~-laGF~~ 117 (271)
.. ... ..+..+...+. ..||..
T Consensus 281 ~~--~~~-~~~~~~~~~l~~~~g~~~ 303 (373)
T 2qm3_A 281 RE--SSL-DKWREIQKLLLNEFNVVI 303 (373)
T ss_dssp TT--CCH-HHHHHHHHHHHHTSCCEE
T ss_pred Cc--CCH-HHHHHHHHHHHHhcCcch
Confidence 10 111 11224444455 677754
No 140
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=97.60 E-value=0.00011 Score=60.22 Aligned_cols=78 Identities=9% Similarity=0.013 Sum_probs=58.9
Q ss_pred CCeEEEeccCCCCCCCCCceeEEEeccccccCCh----------HHHHHHHHHhccCCcEEEEEecCCCCcccHHHHHHH
Q 024162 36 PQIITQASSLSQLPVESFSIDTVLSISSSHELPG----------DQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISA 105 (271)
Q Consensus 36 ~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~----------~~~L~ei~RvLKPGG~l~i~~~~~~~~~e~~~~~~~ 105 (271)
.++.++++++.+ ++++++||+|+++..+++..+ ..++.++.+.| |||++++..+... .. ..
T Consensus 61 ~~~~~~~~d~~~-~~~~~~fD~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~~---~~----~~ 131 (170)
T 3q87_B 61 RGGNLVRADLLC-SINQESVDVVVFNPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEAN---RP----KE 131 (170)
T ss_dssp SSSCEEECSTTT-TBCGGGCSEEEECCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGGG---CH----HH
T ss_pred cCCeEEECChhh-hcccCCCCEEEECCCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEecCC---CH----HH
Confidence 456788999987 777799999999887775332 57889999999 9999999886521 11 25
Q ss_pred HHHHHHHcCCcchhhhh
Q 024162 106 LEGKLLLAGFLDAQRIQ 122 (271)
Q Consensus 106 l~~~l~laGF~~v~~~~ 122 (271)
+...+..+||..+....
T Consensus 132 l~~~l~~~gf~~~~~~~ 148 (170)
T 3q87_B 132 VLARLEERGYGTRILKV 148 (170)
T ss_dssp HHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHCCCcEEEEEe
Confidence 66678889998765543
No 141
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=97.57 E-value=0.00025 Score=64.87 Aligned_cols=67 Identities=15% Similarity=0.155 Sum_probs=51.3
Q ss_pred HHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccc---cccCCh-HHHHHHHHHhccCCcEEE
Q 024162 19 VLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISS---SHELPG-DQLLEEISRVLKPGGTIL 87 (271)
Q Consensus 19 mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~---l~~~~~-~~~L~ei~RvLKPGG~l~ 87 (271)
|++.++++.... ....++.+++++++++++++++||+|++... +++... ..++.++.|+|||||+++
T Consensus 98 ~~~~a~~~~~~~--~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 98 ILYQAMDIIRLN--KLEDTITLIKGKIEEVHLPVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp HHHHHHHHHHHT--TCTTTEEEEESCTTTSCCSCSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred HHHHHHHHHHHc--CCCCcEEEEEeeHHHhcCCCCcEEEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 677777663211 1225789999999999999899999998653 333444 789999999999999998
No 142
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=97.56 E-value=0.00013 Score=60.49 Aligned_cols=56 Identities=14% Similarity=0.178 Sum_probs=45.3
Q ss_pred CeEEEeccCCCCC-------------------------CCCCceeEEEeccccccCC----h--------HHHHHHHHHh
Q 024162 37 QIITQASSLSQLP-------------------------VESFSIDTVLSISSSHELP----G--------DQLLEEISRV 79 (271)
Q Consensus 37 ~v~~~~~d~e~lp-------------------------~~~~sfD~V~s~~~l~~~~----~--------~~~L~ei~Rv 79 (271)
++.++++++.+.+ +++.+||+|++...+++.. + ..++++++|+
T Consensus 64 ~v~~~~~d~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~ 143 (201)
T 2plw_A 64 NVYFIQGEIGKDNMNNIKNINYIDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQY 143 (201)
T ss_dssp TCEEEECCTTTTSSCCC-----------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEccccchhhhhhccccccccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHH
Confidence 5788999998877 6778999999987766641 2 1378999999
Q ss_pred ccCCcEEEEEecC
Q 024162 80 LKPGGTILIYKKL 92 (271)
Q Consensus 80 LKPGG~l~i~~~~ 92 (271)
|||||+|++..+.
T Consensus 144 LkpgG~lv~~~~~ 156 (201)
T 2plw_A 144 INIGGTYIVKMYL 156 (201)
T ss_dssp EEEEEEEEEEEEC
T ss_pred ccCCCEEEEEEeC
Confidence 9999999997765
No 143
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=97.55 E-value=6.7e-05 Score=67.76 Aligned_cols=77 Identities=14% Similarity=-0.032 Sum_probs=54.9
Q ss_pred CeEE-EeccCCCCCCCCCceeEEEecccccc-----------CCh-HHHHHHHHHhccCCcEEEEEecCCCCcccHHHHH
Q 024162 37 QIIT-QASSLSQLPVESFSIDTVLSISSSHE-----------LPG-DQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAI 103 (271)
Q Consensus 37 ~v~~-~~~d~e~lp~~~~sfD~V~s~~~l~~-----------~~~-~~~L~ei~RvLKPGG~l~i~~~~~~~~~e~~~~~ 103 (271)
++.+ +++|+.+++++ ++||+|++....++ ... ..++++++|+|||||+|++..+......
T Consensus 106 ~v~~~i~gD~~~~~~~-~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~~~~------ 178 (290)
T 2xyq_A 106 DADSTLIGDCATVHTA-NKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWNA------ 178 (290)
T ss_dssp SSSEEEESCGGGCCCS-SCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCCH------
T ss_pred CCEEEEECccccCCcc-CcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccCCHH------
Confidence 4667 99999988775 68999999653222 111 4799999999999999999886532211
Q ss_pred HHHHHHHHHcCCcchhhh
Q 024162 104 SALEGKLLLAGFLDAQRI 121 (271)
Q Consensus 104 ~~l~~~l~laGF~~v~~~ 121 (271)
.+...+...||..++..
T Consensus 179 -~l~~~l~~~GF~~v~~~ 195 (290)
T 2xyq_A 179 -DLYKLMGHFSWWTAFVT 195 (290)
T ss_dssp -HHHHHHTTEEEEEEEEE
T ss_pred -HHHHHHHHcCCcEEEEE
Confidence 44555677788765544
No 144
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=97.54 E-value=2.9e-05 Score=73.62 Aligned_cols=56 Identities=16% Similarity=0.167 Sum_probs=46.8
Q ss_pred CCeEEEeccCCCCCCCC--CceeEEEeccccccCCh-HHHHHHHHHhccCCcEEEEEecC
Q 024162 36 PQIITQASSLSQLPVES--FSIDTVLSISSSHELPG-DQLLEEISRVLKPGGTILIYKKL 92 (271)
Q Consensus 36 ~~v~~~~~d~e~lp~~~--~sfD~V~s~~~l~~~~~-~~~L~ei~RvLKPGG~l~i~~~~ 92 (271)
.+|.++++|+.++|+.+ ..||+|+++..++ .++ ...|.+++|+|||||+|++.+..
T Consensus 232 ~rVefi~GD~~~lp~~d~~~~aDVVf~Nn~~F-~pdl~~aL~Ei~RvLKPGGrIVssE~f 290 (438)
T 3uwp_A 232 AEYTLERGDFLSEEWRERIANTSVIFVNNFAF-GPEVDHQLKERFANMKEGGRIVSSKPF 290 (438)
T ss_dssp CEEEEEECCTTSHHHHHHHHTCSEEEECCTTC-CHHHHHHHHHHHTTSCTTCEEEESSCS
T ss_pred CCeEEEECcccCCccccccCCccEEEEccccc-CchHHHHHHHHHHcCCCCcEEEEeecc
Confidence 57999999999999865 5799999876543 344 88899999999999999998754
No 145
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=97.51 E-value=0.00027 Score=62.16 Aligned_cols=92 Identities=12% Similarity=0.078 Sum_probs=64.3
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCCh-HHHHHHHHHhccCCcEEEEEecCCC
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPG-DQLLEEISRVLKPGGTILIYKKLTS 94 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~-~~~L~ei~RvLKPGG~l~i~~~~~~ 94 (271)
++.+++.+++..... ....++.+..+++.+. +++++||+|++.. ++ ..++.++.++|+|||+|++..+..
T Consensus 146 s~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~-~~~~~~D~V~~~~-----~~~~~~l~~~~~~L~pgG~l~~~~~~~- 216 (277)
T 1o54_A 146 REEFAKLAESNLTKW--GLIERVTIKVRDISEG-FDEKDVDALFLDV-----PDPWNYIDKCWEALKGGGRFATVCPTT- 216 (277)
T ss_dssp CHHHHHHHHHHHHHT--TCGGGEEEECCCGGGC-CSCCSEEEEEECC-----SCGGGTHHHHHHHEEEEEEEEEEESSH-
T ss_pred CHHHHHHHHHHHHHc--CCCCCEEEEECCHHHc-ccCCccCEEEECC-----cCHHHHHHHHHHHcCCCCEEEEEeCCH-
Confidence 566777777653211 0113688899998876 7778999999842 33 578999999999999999998651
Q ss_pred CcccHHHHHHHHHHHHHHcCCcchhhhh
Q 024162 95 DKGDVDKAISALEGKLLLAGFLDAQRIQ 122 (271)
Q Consensus 95 ~~~e~~~~~~~l~~~l~laGF~~v~~~~ 122 (271)
.....+...+..+||..++..+
T Consensus 217 ------~~~~~~~~~l~~~gf~~~~~~~ 238 (277)
T 1o54_A 217 ------NQVQETLKKLQELPFIRIEVWE 238 (277)
T ss_dssp ------HHHHHHHHHHHHSSEEEEEEEC
T ss_pred ------HHHHHHHHHHHHCCCceeEEEE
Confidence 1123455567779998766543
No 146
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=97.50 E-value=0.00015 Score=64.38 Aligned_cols=68 Identities=12% Similarity=0.055 Sum_probs=50.2
Q ss_pred cHHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCC-----CCCceeEEEeccccccCCh---HHHHHHHHHhccCCcEE
Q 024162 15 PVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPV-----ESFSIDTVLSISSSHELPG---DQLLEEISRVLKPGGTI 86 (271)
Q Consensus 15 ~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~-----~~~sfD~V~s~~~l~~~~~---~~~L~ei~RvLKPGG~l 86 (271)
.++.|++.++++.... ++..++..++. .+++||+|++..++||+.. ..++++++++| |||+|
T Consensus 75 ~S~~ml~~Ar~~~~~~---------~v~~~~~~~~~~~~~~~~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l 144 (261)
T 3iv6_A 75 FSQRMCDDLAEALADR---------CVTIDLLDITAEIPKELAGHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTV 144 (261)
T ss_dssp SCHHHHHHHHHHTSSS---------CCEEEECCTTSCCCGGGTTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEE
T ss_pred CCHHHHHHHHHHHHhc---------cceeeeeecccccccccCCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEE
Confidence 4789999999885221 12233333332 2578999999999988764 67999999999 99999
Q ss_pred EEEecC
Q 024162 87 LIYKKL 92 (271)
Q Consensus 87 ~i~~~~ 92 (271)
+++...
T Consensus 145 ~lS~~~ 150 (261)
T 3iv6_A 145 RASVKL 150 (261)
T ss_dssp EEEEEB
T ss_pred EEEecc
Confidence 998754
No 147
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=97.49 E-value=0.00014 Score=61.19 Aligned_cols=74 Identities=9% Similarity=-0.051 Sum_probs=54.9
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCC-CCCCCCceeEEEeccccccCChHHHHHHHHH--hccCCcEEEEEecC
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQ-LPVESFSIDTVLSISSSHELPGDQLLEEISR--VLKPGGTILIYKKL 92 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~-lp~~~~sfD~V~s~~~l~~~~~~~~L~ei~R--vLKPGG~l~i~~~~ 92 (271)
++.|++.++++.... ...++.++++|+.+ ++...++||+|++...++.-....+++++.+ +|||||+|++....
T Consensus 86 s~~~l~~a~~~~~~~---~~~~v~~~~~D~~~~~~~~~~~fD~V~~~~p~~~~~~~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 86 DRAVSQQLIKNLATL---KAGNARVVNSNAMSFLAQKGTPHNIVFVDPPFRRGLLEETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp CHHHHHHHHHHHHHT---TCCSEEEECSCHHHHHSSCCCCEEEEEECCSSSTTTHHHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred CHHHHHHHHHHHHHc---CCCcEEEEECCHHHHHhhcCCCCCEEEECCCCCCCcHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 678888888764221 11478999999876 5777789999999766553223778888865 59999999988754
No 148
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=97.49 E-value=0.0002 Score=65.45 Aligned_cols=74 Identities=15% Similarity=0.143 Sum_probs=55.9
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCC--CCCCCceeEEEecccccc-----CChHHHHHHHHHhccCCcEEEE
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQL--PVESFSIDTVLSISSSHE-----LPGDQLLEEISRVLKPGGTILI 88 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~l--p~~~~sfD~V~s~~~l~~-----~~~~~~L~ei~RvLKPGG~l~i 88 (271)
++.|++++|++... ....++.++.+|+..+ .+++++||+|++....++ +...+++++++|+|||||+|++
T Consensus 122 dp~vi~~Ar~~~~~---~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~ 198 (317)
T 3gjy_A 122 DAELARLSREWFDI---PRAPRVKIRVDDARMVAESFTPASRDVIIRDVFAGAITPQNFTTVEFFEHCHRGLAPGGLYVA 198 (317)
T ss_dssp CHHHHHHHHHHSCC---CCTTTEEEEESCHHHHHHTCCTTCEEEEEECCSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEE
T ss_pred CHHHHHHHHHhccc---cCCCceEEEECcHHHHHhhccCCCCCEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEE
Confidence 67899999988521 1346789999998754 355789999998543222 2237899999999999999998
Q ss_pred EecC
Q 024162 89 YKKL 92 (271)
Q Consensus 89 ~~~~ 92 (271)
....
T Consensus 199 ~~~~ 202 (317)
T 3gjy_A 199 NCGD 202 (317)
T ss_dssp EEEE
T ss_pred EecC
Confidence 8764
No 149
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=97.49 E-value=0.00033 Score=56.48 Aligned_cols=85 Identities=4% Similarity=0.033 Sum_probs=62.3
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCChHHHHHHHHHhccCCcEEEEEecCCCC
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYKKLTSD 95 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~~~~L~ei~RvLKPGG~l~i~~~~~~~ 95 (271)
++.|++.++++.... ...++.++++++.+ ++++++||+|++... -....+++++.++ |||+|++.....
T Consensus 66 ~~~~~~~a~~~~~~~---~~~~~~~~~~d~~~-~~~~~~~D~i~~~~~---~~~~~~l~~~~~~--~gG~l~~~~~~~-- 134 (183)
T 2yxd_A 66 LDGAIEVTKQNLAKF---NIKNCQIIKGRAED-VLDKLEFNKAFIGGT---KNIEKIIEILDKK--KINHIVANTIVL-- 134 (183)
T ss_dssp SHHHHHHHHHHHHHT---TCCSEEEEESCHHH-HGGGCCCSEEEECSC---SCHHHHHHHHHHT--TCCEEEEEESCH--
T ss_pred CHHHHHHHHHHHHHc---CCCcEEEEECCccc-cccCCCCcEEEECCc---ccHHHHHHHHhhC--CCCEEEEEeccc--
Confidence 577888888764211 11468899999887 777789999999876 2238899999999 999999998652
Q ss_pred cccHHHHHHHHHHHHHHcCCc
Q 024162 96 KGDVDKAISALEGKLLLAGFL 116 (271)
Q Consensus 96 ~~e~~~~~~~l~~~l~laGF~ 116 (271)
.....+...+..+||.
T Consensus 135 -----~~~~~~~~~l~~~g~~ 150 (183)
T 2yxd_A 135 -----ENAAKIINEFESRGYN 150 (183)
T ss_dssp -----HHHHHHHHHHHHTTCE
T ss_pred -----ccHHHHHHHHHHcCCe
Confidence 1123566778888864
No 150
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=97.49 E-value=8.7e-05 Score=62.47 Aligned_cols=75 Identities=17% Similarity=0.165 Sum_probs=54.7
Q ss_pred cHHHHHHHHHHhCchhhhcCC-CCeEEEeccCCCCCC--CCCc-eeEEEeccccccCCh-HHHHHHH--HHhccCCcEEE
Q 024162 15 PVSAVLNAIRDLGDEAVEQCD-PQIITQASSLSQLPV--ESFS-IDTVLSISSSHELPG-DQLLEEI--SRVLKPGGTIL 87 (271)
Q Consensus 15 ~s~~mv~~ar~~~~~~~~~~~-~~v~~~~~d~e~lp~--~~~s-fD~V~s~~~l~~~~~-~~~L~ei--~RvLKPGG~l~ 87 (271)
.++.|++.++++.... ... .++.++++|+.++.. .+++ ||+|++...++ ... ..+++++ .|+|||||+|+
T Consensus 84 ~s~~~l~~a~~~~~~~--~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~~~~~-~~~~~~~l~~~~~~~~LkpgG~l~ 160 (201)
T 2ift_A 84 LDKTVANQLKKNLQTL--KCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLDPPFH-FNLAEQAISLLCENNWLKPNALIY 160 (201)
T ss_dssp SCHHHHHHHHHHHHHT--TCCTTTEEEECSCHHHHTTSCCSSCCEEEEEECCCSS-SCHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHh--CCCccceEEEECCHHHHHHhhccCCCCCEEEECCCCC-CccHHHHHHHHHhcCccCCCcEEE
Confidence 3678888888864211 111 368999999876532 3678 99999977654 344 7889999 77899999999
Q ss_pred EEecC
Q 024162 88 IYKKL 92 (271)
Q Consensus 88 i~~~~ 92 (271)
+....
T Consensus 161 i~~~~ 165 (201)
T 2ift_A 161 VETEK 165 (201)
T ss_dssp EEEES
T ss_pred EEECC
Confidence 98765
No 151
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=97.48 E-value=0.0005 Score=60.27 Aligned_cols=77 Identities=8% Similarity=0.079 Sum_probs=53.7
Q ss_pred HHHHHHHHHHhCchhh-hcCCCCeEEEeccCCCC-------CCCCCceeEEEeccccccC-----------------C--
Q 024162 16 VSAVLNAIRDLGDEAV-EQCDPQIITQASSLSQL-------PVESFSIDTVLSISSSHEL-----------------P-- 68 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~-~~~~~~v~~~~~d~e~l-------p~~~~sfD~V~s~~~l~~~-----------------~-- 68 (271)
++.|++.+++...... .....++.++++|+.++ ++++++||+|+++..+... .
T Consensus 69 ~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~ 148 (260)
T 2ozv_A 69 SQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGL 148 (260)
T ss_dssp SHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTTCEEEEEECCCC---------------------CC
T ss_pred CHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCC
Confidence 5788888888742100 01112588999999887 3678899999997433221 1
Q ss_pred hHHHHHHHHHhccCCcEEEEEecC
Q 024162 69 GDQLLEEISRVLKPGGTILIYKKL 92 (271)
Q Consensus 69 ~~~~L~ei~RvLKPGG~l~i~~~~ 92 (271)
-..+++++.++|||||+|++....
T Consensus 149 ~~~~l~~~~~~LkpgG~l~~~~~~ 172 (260)
T 2ozv_A 149 FEDWIRTASAIMVSGGQLSLISRP 172 (260)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEECG
T ss_pred HHHHHHHHHHHcCCCCEEEEEEcH
Confidence 278899999999999999987644
No 152
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=97.45 E-value=0.00016 Score=64.13 Aligned_cols=95 Identities=7% Similarity=0.006 Sum_probs=64.6
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCChHHHHHHHHHhccCCcEEEEEecCCCC
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYKKLTSD 95 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~~~~L~ei~RvLKPGG~l~i~~~~~~~ 95 (271)
++.|++.+++..... .....+.++++|+.+++. .++||+|++.... ....++.+++|+|||||+|++.+.....
T Consensus 157 s~~~~~~a~~n~~~n--~~~~~v~~~~~D~~~~~~-~~~fD~Vi~~~p~---~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 230 (278)
T 2frn_A 157 DPYTFKFLVENIHLN--KVEDRMSAYNMDNRDFPG-ENIADRILMGYVV---RTHEFIPKALSIAKDGAIIHYHNTVPEK 230 (278)
T ss_dssp CHHHHHHHHHHHHHT--TCTTTEEEECSCTTTCCC-CSCEEEEEECCCS---SGGGGHHHHHHHEEEEEEEEEEEEEEGG
T ss_pred CHHHHHHHHHHHHHc--CCCceEEEEECCHHHhcc-cCCccEEEECCch---hHHHHHHHHHHHCCCCeEEEEEEeeccc
Confidence 567777777763211 112348899999998877 7899999985431 1267899999999999999998876321
Q ss_pred cccHHHHHHHHHHHHHHcCCcc
Q 024162 96 KGDVDKAISALEGKLLLAGFLD 117 (271)
Q Consensus 96 ~~e~~~~~~~l~~~l~laGF~~ 117 (271)
.. .....+.+...+..+||..
T Consensus 231 ~~-~~~~~~~i~~~~~~~G~~~ 251 (278)
T 2frn_A 231 LM-PREPFETFKRITKEYGYDV 251 (278)
T ss_dssp GT-TTTTHHHHHHHHHHTTCEE
T ss_pred cc-cccHHHHHHHHHHHcCCee
Confidence 10 0112235566778889864
No 153
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=97.45 E-value=0.0002 Score=65.32 Aligned_cols=71 Identities=18% Similarity=0.129 Sum_probs=53.9
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccC-----Ch-HHHHHHHHHhccCCcEEEEE
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHEL-----PG-DQLLEEISRVLKPGGTILIY 89 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~-----~~-~~~L~ei~RvLKPGG~l~i~ 89 (271)
++.|++.++++... .+..+.++.+++... .+++||+|+++..+|+. .. ..++++++|+|||||+|++.
T Consensus 229 s~~~l~~a~~~~~~----~~~~~~~~~~d~~~~--~~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 302 (343)
T 2pjd_A 229 SAPAVEASRATLAA----NGVEGEVFASNVFSE--VKGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIV 302 (343)
T ss_dssp BHHHHHHHHHHHHH----TTCCCEEEECSTTTT--CCSCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred CHHHHHHHHHHHHH----hCCCCEEEEcccccc--ccCCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEE
Confidence 67888888877421 223456777887654 37799999998888752 22 78999999999999999998
Q ss_pred ecC
Q 024162 90 KKL 92 (271)
Q Consensus 90 ~~~ 92 (271)
...
T Consensus 303 ~~~ 305 (343)
T 2pjd_A 303 ANA 305 (343)
T ss_dssp EET
T ss_pred EcC
Confidence 765
No 154
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=97.44 E-value=0.00019 Score=60.89 Aligned_cols=68 Identities=16% Similarity=0.030 Sum_probs=53.4
Q ss_pred cHHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCChHHHHHHHHHhccCCcEEEEEecC
Q 024162 15 PVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYKKL 92 (271)
Q Consensus 15 ~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~~~~L~ei~RvLKPGG~l~i~~~~ 92 (271)
.++.|++.++++... . .++.++.+++......+++||+|++...++++. .+++++|||||++++....
T Consensus 100 ~~~~~~~~a~~~~~~----~-~~v~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~-----~~~~~~L~pgG~l~~~~~~ 167 (231)
T 1vbf_A 100 INEKMYNYASKLLSY----Y-NNIKLILGDGTLGYEEEKPYDRVVVWATAPTLL-----CKPYEQLKEGGIMILPIGV 167 (231)
T ss_dssp SCHHHHHHHHHHHTT----C-SSEEEEESCGGGCCGGGCCEEEEEESSBBSSCC-----HHHHHTEEEEEEEEEEECS
T ss_pred CCHHHHHHHHHHHhh----c-CCeEEEECCcccccccCCCccEEEECCcHHHHH-----HHHHHHcCCCcEEEEEEcC
Confidence 367888888887421 1 168899999887333567999999999888876 4799999999999999765
No 155
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=97.44 E-value=0.0002 Score=66.72 Aligned_cols=76 Identities=16% Similarity=0.151 Sum_probs=54.2
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccC---Ch---HHHHHHHHHhccCCcEEEEE
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHEL---PG---DQLLEEISRVLKPGGTILIY 89 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~---~~---~~~L~ei~RvLKPGG~l~i~ 89 (271)
++.|++.++++..........++.+..+++.+ ++++++||+|+++..+|+. .. ..++++++|+|||||+|++.
T Consensus 255 s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~-~~~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv 333 (375)
T 4dcm_A 255 SPMAVASSRLNVETNMPEALDRCEFMINNALS-GVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIV 333 (375)
T ss_dssp CHHHHHHHHHHHHHHCGGGGGGEEEEECSTTT-TCCTTCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cHHHHHHHHHHHHHcCCCcCceEEEEechhhc-cCCCCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEE
Confidence 57788888876422110111358889999887 6778899999998877742 22 57899999999999999998
Q ss_pred ecC
Q 024162 90 KKL 92 (271)
Q Consensus 90 ~~~ 92 (271)
...
T Consensus 334 ~n~ 336 (375)
T 4dcm_A 334 ANR 336 (375)
T ss_dssp EET
T ss_pred EEC
Confidence 754
No 156
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=97.44 E-value=0.00067 Score=57.49 Aligned_cols=67 Identities=16% Similarity=0.198 Sum_probs=47.1
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCC---CCCCceeEEEeccccccCCh-HHHHHHHHHhccCCcEEEEE
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLP---VESFSIDTVLSISSSHELPG-DQLLEEISRVLKPGGTILIY 89 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp---~~~~sfD~V~s~~~l~~~~~-~~~L~ei~RvLKPGG~l~i~ 89 (271)
++.|++.+++.... ..++.++++++.... ...++||+|++... .... ..++.+++|+|||||+|++.
T Consensus 107 s~~~~~~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~~~--~~~~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 107 SPRVLRELVPIVEE-----RRNIVPILGDATKPEEYRALVPKVDVIFEDVA--QPTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp CHHHHHHHHHHHSS-----CTTEEEEECCTTCGGGGTTTCCCEEEEEECCC--STTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CHHHHHHHHHHHhc-----cCCCEEEEccCCCcchhhcccCCceEEEECCC--CHhHHHHHHHHHHHhcCCCCEEEEE
Confidence 56666666665321 156899999998732 12458999997654 1112 45599999999999999998
No 157
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=97.42 E-value=0.0003 Score=65.25 Aligned_cols=71 Identities=18% Similarity=0.194 Sum_probs=52.3
Q ss_pred HHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCC---h-HHHHHHHHHhccCCcEEEEEec
Q 024162 18 AVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELP---G-DQLLEEISRVLKPGGTILIYKK 91 (271)
Q Consensus 18 ~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~---~-~~~L~ei~RvLKPGG~l~i~~~ 91 (271)
.|++.++++.... ....++.++++++++++++ ++||+|++....+++. . ..++.+++|+|||||.|++...
T Consensus 96 ~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~~~-~~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~~ 170 (376)
T 3r0q_C 96 KMADHARALVKAN--NLDHIVEVIEGSVEDISLP-EKVDVIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSHA 170 (376)
T ss_dssp TTHHHHHHHHHHT--TCTTTEEEEESCGGGCCCS-SCEEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSEE
T ss_pred HHHHHHHHHHHHc--CCCCeEEEEECchhhcCcC-CcceEEEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEecC
Confidence 4666666653211 1224589999999999887 8999999966555543 2 7799999999999999987543
No 158
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=97.41 E-value=0.0002 Score=64.64 Aligned_cols=69 Identities=16% Similarity=0.115 Sum_probs=54.0
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCChHHHHHHHHHhccCCcEEEEEecC
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYKKL 92 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~~~~L~ei~RvLKPGG~l~i~~~~ 92 (271)
++.|++.++++... ....++.++.+++...+..+++||+|++...++++. .++.++|||||++++....
T Consensus 109 s~~~~~~a~~~~~~---~g~~~v~~~~~d~~~~~~~~~~fD~Iv~~~~~~~~~-----~~~~~~LkpgG~lvi~~~~ 177 (317)
T 1dl5_A 109 SRKICEIAKRNVER---LGIENVIFVCGDGYYGVPEFSPYDVIFVTVGVDEVP-----ETWFTQLKEGGRVIVPINL 177 (317)
T ss_dssp CHHHHHHHHHHHHH---TTCCSEEEEESCGGGCCGGGCCEEEEEECSBBSCCC-----HHHHHHEEEEEEEEEEBCB
T ss_pred CHHHHHHHHHHHHH---cCCCCeEEEECChhhccccCCCeEEEEEcCCHHHHH-----HHHHHhcCCCcEEEEEECC
Confidence 57788888876421 112358999999988666678999999999888886 6789999999999998643
No 159
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=97.40 E-value=0.00068 Score=61.32 Aligned_cols=82 Identities=23% Similarity=0.148 Sum_probs=54.7
Q ss_pred EEEEecCCcccHHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccc------cccCCh---------
Q 024162 5 VLALSEDKILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISS------SHELPG--------- 69 (271)
Q Consensus 5 vl~~td~~~~~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~------l~~~~~--------- 69 (271)
.++..|. ++.|++.++++.... ...++.++++|+..++..+++||+|++... ++..++
T Consensus 145 ~v~avD~----s~~~l~~a~~~~~~~---g~~~v~~~~~D~~~~~~~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~ 217 (315)
T 1ixk_A 145 VIYAFDV----DENRLRETRLNLSRL---GVLNVILFHSSSLHIGELNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDD 217 (315)
T ss_dssp EEEEECS----CHHHHHHHHHHHHHH---TCCSEEEESSCGGGGGGGCCCEEEEEEECCTTSTTTCC--------CCHHH
T ss_pred EEEEEcC----CHHHHHHHHHHHHHh---CCCeEEEEECChhhcccccccCCEEEEeCCCCCcccccCChhHhhcCCHHH
Confidence 3444444 456667776653211 113688999999888766678999998321 211111
Q ss_pred --------HHHHHHHHHhccCCcEEEEEecCC
Q 024162 70 --------DQLLEEISRVLKPGGTILIYKKLT 93 (271)
Q Consensus 70 --------~~~L~ei~RvLKPGG~l~i~~~~~ 93 (271)
..+|.+++++|||||+|++++...
T Consensus 218 ~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~ 249 (315)
T 1ixk_A 218 IKFCQGLQMRLLEKGLEVLKPGGILVYSTCSL 249 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCC
Confidence 478999999999999999988653
No 160
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=97.40 E-value=0.00038 Score=59.91 Aligned_cols=70 Identities=9% Similarity=0.112 Sum_probs=45.9
Q ss_pred HHHHHHH---HHhCchhhhcCCCCeEEEeccCCCCCCC-CCceeEEEecccccc-----CC-hHHHHHHHHHhccCCcEE
Q 024162 17 SAVLNAI---RDLGDEAVEQCDPQIITQASSLSQLPVE-SFSIDTVLSISSSHE-----LP-GDQLLEEISRVLKPGGTI 86 (271)
Q Consensus 17 ~~mv~~a---r~~~~~~~~~~~~~v~~~~~d~e~lp~~-~~sfD~V~s~~~l~~-----~~-~~~~L~ei~RvLKPGG~l 86 (271)
+.|++.| +++.. .....++.|++++++.+|.. ...||.|++++...+ .. ...+|++++|+|||||+|
T Consensus 59 ~~ml~~A~~A~~~~~---~~~~~~v~~~~~d~~~l~~~~~d~v~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l 135 (225)
T 3p2e_A 59 ENLFDISKKIIKKPS---KGGLSNVVFVIAAAESLPFELKNIADSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHF 135 (225)
T ss_dssp GGGHHHHHHHTSCGG---GTCCSSEEEECCBTTBCCGGGTTCEEEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEE
T ss_pred HHHHHHHHHHHHHHH---HcCCCCeEEEEcCHHHhhhhccCeEEEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEE
Confidence 5566665 44431 12224689999999998742 255666665543211 11 267899999999999999
Q ss_pred EEE
Q 024162 87 LIY 89 (271)
Q Consensus 87 ~i~ 89 (271)
++.
T Consensus 136 ~i~ 138 (225)
T 3p2e_A 136 EFV 138 (225)
T ss_dssp EEE
T ss_pred EEE
Confidence 993
No 161
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=97.39 E-value=0.00033 Score=64.11 Aligned_cols=74 Identities=18% Similarity=0.121 Sum_probs=56.1
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCCh---------HHHHHHHHHhccCCcEE
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPG---------DQLLEEISRVLKPGGTI 86 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~---------~~~L~ei~RvLKPGG~l 86 (271)
++.|++.+++..... .-..+.+.++|+.+++.+..+||+|+++..+.+... ..+++++.|+|||||++
T Consensus 237 ~~~~i~~a~~n~~~~---g~~~i~~~~~D~~~~~~~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l 313 (354)
T 3tma_A 237 DEKRLGLAREAALAS---GLSWIRFLRADARHLPRFFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRV 313 (354)
T ss_dssp CHHHHHHHHHHHHHT---TCTTCEEEECCGGGGGGTCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEE
T ss_pred CHHHHHHHHHHHHHc---CCCceEEEeCChhhCccccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEE
Confidence 677888888764221 112689999999999988888999999655433211 67899999999999999
Q ss_pred EEEecC
Q 024162 87 LIYKKL 92 (271)
Q Consensus 87 ~i~~~~ 92 (271)
++.+..
T Consensus 314 ~i~t~~ 319 (354)
T 3tma_A 314 ALLTLR 319 (354)
T ss_dssp EEEESC
T ss_pred EEEeCC
Confidence 999865
No 162
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=97.39 E-value=0.00028 Score=59.18 Aligned_cols=70 Identities=14% Similarity=0.139 Sum_probs=52.1
Q ss_pred cHHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCChHHHHHHHHHhccCCcEEEEEecC
Q 024162 15 PVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYKKL 92 (271)
Q Consensus 15 ~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~~~~L~ei~RvLKPGG~l~i~~~~ 92 (271)
.++.|++.++++... ....++.+..+++.......++||+|++...++++. .+++++|||||+|++....
T Consensus 110 ~~~~~~~~a~~~~~~---~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~-----~~~~~~L~pgG~lv~~~~~ 179 (215)
T 2yxe_A 110 RIPELAEKAERTLRK---LGYDNVIVIVGDGTLGYEPLAPYDRIYTTAAGPKIP-----EPLIRQLKDGGKLLMPVGR 179 (215)
T ss_dssp SCHHHHHHHHHHHHH---HTCTTEEEEESCGGGCCGGGCCEEEEEESSBBSSCC-----HHHHHTEEEEEEEEEEESS
T ss_pred CCHHHHHHHHHHHHH---cCCCCeEEEECCcccCCCCCCCeeEEEECCchHHHH-----HHHHHHcCCCcEEEEEECC
Confidence 356788888876421 111358888888854322367899999999888886 4899999999999998765
No 163
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=97.37 E-value=0.00032 Score=58.35 Aligned_cols=69 Identities=14% Similarity=0.185 Sum_probs=51.9
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCCh-HHHHHHHHHhccCCcEEEEEecC
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPG-DQLLEEISRVLKPGGTILIYKKL 92 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~-~~~L~ei~RvLKPGG~l~i~~~~ 92 (271)
++.|++.+++.... ....++.+.++++..++ +.++||+|++.. +.+ ..++.+++++|+|||+|++....
T Consensus 98 s~~~~~~a~~~~~~---~~~~~v~~~~~d~~~~~-~~~~~D~i~~~~----~~~~~~~l~~~~~~L~~gG~l~~~~~~ 167 (207)
T 1jsx_A 98 LGKRVRFLRQVQHE---LKLENIEPVQSRVEEFP-SEPPFDGVISRA----FASLNDMVSWCHHLPGEQGRFYALKGQ 167 (207)
T ss_dssp CHHHHHHHHHHHHH---TTCSSEEEEECCTTTSC-CCSCEEEEECSC----SSSHHHHHHHHTTSEEEEEEEEEEESS
T ss_pred CHHHHHHHHHHHHH---cCCCCeEEEecchhhCC-ccCCcCEEEEec----cCCHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 57778888776421 11134889999998876 567899999753 233 78999999999999999998654
No 164
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=97.37 E-value=0.00063 Score=61.79 Aligned_cols=68 Identities=16% Similarity=0.151 Sum_probs=50.7
Q ss_pred HHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEecccccc---CCh-HHHHHHHHHhccCCcEEEE
Q 024162 19 VLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHE---LPG-DQLLEEISRVLKPGGTILI 88 (271)
Q Consensus 19 mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~---~~~-~~~L~ei~RvLKPGG~l~i 88 (271)
|++.++++.... ....++.+++++++++++++++||+|++....+. ... ..++.++.|+|||||+++.
T Consensus 72 ~~~~a~~~~~~~--~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 72 IIEMAKELVELN--GFSDKITLLRGKLEDVHLPFPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp HHHHHHHHHHHT--TCTTTEEEEESCTTTSCCSSSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred HHHHHHHHHHHc--CCCCCEEEEECchhhccCCCCcccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 677777663211 1224689999999999998889999999754333 223 7899999999999999974
No 165
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=97.34 E-value=0.00011 Score=59.84 Aligned_cols=76 Identities=16% Similarity=0.067 Sum_probs=54.2
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCC----CCCCCceeEEEeccccccCChHHHHHHH--HHhccCCcEEEEE
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQL----PVESFSIDTVLSISSSHELPGDQLLEEI--SRVLKPGGTILIY 89 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~l----p~~~~sfD~V~s~~~l~~~~~~~~L~ei--~RvLKPGG~l~i~ 89 (271)
++.|++.+++..... ....++.++++|+.+. ++.+++||+|++...++.......+..+ +|+|||||++++.
T Consensus 76 ~~~~~~~a~~~~~~~--~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~L~~gG~l~~~ 153 (187)
T 2fhp_A 76 NFAALKVIKENIAIT--KEPEKFEVRKMDANRALEQFYEEKLQFDLVLLDPPYAKQEIVSQLEKMLERQLLTNEAVIVCE 153 (187)
T ss_dssp CHHHHHHHHHHHHHH--TCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECCCGGGCCHHHHHHHHHHTTCEEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHh--CCCcceEEEECcHHHHHHHHHhcCCCCCEEEECCCCCchhHHHHHHHHHHhcccCCCCEEEEE
Confidence 577888888764221 1113588999998763 2337899999998765543447778888 9999999999998
Q ss_pred ecCC
Q 024162 90 KKLT 93 (271)
Q Consensus 90 ~~~~ 93 (271)
....
T Consensus 154 ~~~~ 157 (187)
T 2fhp_A 154 TDKT 157 (187)
T ss_dssp EETT
T ss_pred eCCc
Confidence 7664
No 166
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=97.34 E-value=0.00085 Score=57.94 Aligned_cols=76 Identities=20% Similarity=0.170 Sum_probs=52.0
Q ss_pred HHHHHHHHHHhCchhhh--c---CCCCeEEEeccCCC-CC--CCCCceeEEEeccccccCC---------hHHHHHHHHH
Q 024162 16 VSAVLNAIRDLGDEAVE--Q---CDPQIITQASSLSQ-LP--VESFSIDTVLSISSSHELP---------GDQLLEEISR 78 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~--~---~~~~v~~~~~d~e~-lp--~~~~sfD~V~s~~~l~~~~---------~~~~L~ei~R 78 (271)
++.|++.++++...... . ...++.++++|+.. ++ ++.++||.|+....-.|.. ...++.++.+
T Consensus 82 s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~ 161 (246)
T 2vdv_E 82 RVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAY 161 (246)
T ss_dssp CHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTCEEEEEEESCCCC------CSSCCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccccccCEEEEECCCcccccchhHHhhccHHHHHHHHH
Confidence 56677777665321100 0 12468999999986 67 7889999998755333321 1489999999
Q ss_pred hccCCcEEEEEec
Q 024162 79 VLKPGGTILIYKK 91 (271)
Q Consensus 79 vLKPGG~l~i~~~ 91 (271)
+|||||+|++.+.
T Consensus 162 ~LkpgG~l~~~td 174 (246)
T 2vdv_E 162 VLKEGGVVYTITD 174 (246)
T ss_dssp HEEEEEEEEEEES
T ss_pred HcCCCCEEEEEec
Confidence 9999999999753
No 167
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=97.33 E-value=2.6e-05 Score=64.84 Aligned_cols=94 Identities=7% Similarity=-0.038 Sum_probs=49.4
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCC-----CceeEEEeccccccCCh---------------------
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVES-----FSIDTVLSISSSHELPG--------------------- 69 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~-----~sfD~V~s~~~l~~~~~--------------------- 69 (271)
++.|++.++++.... +.++.++++|+.+ ++++ ++||+|++...++....
T Consensus 63 ~~~~~~~a~~~~~~~----~~~~~~~~~d~~~-~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (215)
T 4dzr_A 63 SMDALAVARRNAERF----GAVVDWAAADGIE-WLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGE 137 (215)
T ss_dssp C-----------------------CCHHHHHH-HHHHHHHTTCCBSEEEECCCCCC------------------------
T ss_pred CHHHHHHHHHHHHHh----CCceEEEEcchHh-hhhhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCC
Confidence 456677777664211 1267788888877 6665 89999999644322111
Q ss_pred ------HHHHHHHHHhccCCcEEEEEecCCCCcccHHHHHHHHHHHHH--HcCCcchhhh
Q 024162 70 ------DQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLL--LAGFLDAQRI 121 (271)
Q Consensus 70 ------~~~L~ei~RvLKPGG~l~i~~~~~~~~~e~~~~~~~l~~~l~--laGF~~v~~~ 121 (271)
..++++++++|||||++++...... .. ..+...+. .+||..+...
T Consensus 138 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~---~~----~~~~~~l~~~~~gf~~~~~~ 190 (215)
T 4dzr_A 138 DGLQFYRRMAALPPYVLARGRAGVFLEVGHN---QA----DEVARLFAPWRERGFRVRKV 190 (215)
T ss_dssp CTTHHHHHHHTCCGGGBCSSSEEEEEECTTS---CH----HHHHHHTGGGGGGTEECCEE
T ss_pred cHHHHHHHHHHHHHHHhcCCCeEEEEEECCc---cH----HHHHHHHHHhhcCCceEEEE
Confidence 5678899999999999555544321 11 14445566 7888776554
No 168
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=97.28 E-value=0.0003 Score=59.55 Aligned_cols=72 Identities=10% Similarity=0.075 Sum_probs=52.7
Q ss_pred HHHHHHHHHHhCchh-hh-cCCCCeEEEeccCCCCCCCCCceeEEEeccccccCChHHHHHHHHHhccCCcEEEEEecC
Q 024162 16 VSAVLNAIRDLGDEA-VE-QCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYKKL 92 (271)
Q Consensus 16 s~~mv~~ar~~~~~~-~~-~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~~~~L~ei~RvLKPGG~l~i~~~~ 92 (271)
++.|++.++++.... .. ....++.++++++...+...++||+|++...++++ +.+++++|||||+|++....
T Consensus 111 s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~~~~~~~~-----~~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 111 IKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYDAIHVGAAAPVV-----PQALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp CHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEEEEEECSBBSSC-----CHHHHHTEEEEEEEEEEESC
T ss_pred CHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCcCEEEECCchHHH-----HHHHHHhcCCCcEEEEEEec
Confidence 567777777664211 00 00246889999998776667899999998777665 36899999999999998764
No 169
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=97.25 E-value=0.00041 Score=64.79 Aligned_cols=48 Identities=21% Similarity=0.173 Sum_probs=41.0
Q ss_pred CCCCCCCceeEEEeccccccCCh---------------------------------------HHHHHHHHHhccCCcEEE
Q 024162 47 QLPVESFSIDTVLSISSSHELPG---------------------------------------DQLLEEISRVLKPGGTIL 87 (271)
Q Consensus 47 ~lp~~~~sfD~V~s~~~l~~~~~---------------------------------------~~~L~ei~RvLKPGG~l~ 87 (271)
.-.|+++|||+|+|++++||+.. ..+|+..+|.|+|||+++
T Consensus 143 ~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra~eL~pGG~mv 222 (374)
T 3b5i_A 143 RRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARAAEVKRGGAMF 222 (374)
T ss_dssp SCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEE
T ss_pred cccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEE
Confidence 34589999999999999999872 336888999999999999
Q ss_pred EEecCCC
Q 024162 88 IYKKLTS 94 (271)
Q Consensus 88 i~~~~~~ 94 (271)
++..+.+
T Consensus 223 l~~~gr~ 229 (374)
T 3b5i_A 223 LVCLGRT 229 (374)
T ss_dssp EEEEECC
T ss_pred EEEecCC
Confidence 9988764
No 170
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=97.22 E-value=0.00012 Score=59.65 Aligned_cols=77 Identities=9% Similarity=-0.026 Sum_probs=54.1
Q ss_pred cHHHHHHHHHHhCchhhhcCCCCeEEEeccCCC-CCCCCCceeEEEeccccccCChHHHHHHHH--HhccCCcEEEEEec
Q 024162 15 PVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQ-LPVESFSIDTVLSISSSHELPGDQLLEEIS--RVLKPGGTILIYKK 91 (271)
Q Consensus 15 ~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~-lp~~~~sfD~V~s~~~l~~~~~~~~L~ei~--RvLKPGG~l~i~~~ 91 (271)
.++.|++.++++.... ....++.++.+++.+ ++..++.||+|++...++......++..+. ++|||||++++...
T Consensus 62 ~~~~~~~~a~~~~~~~--~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~L~~gG~l~~~~~ 139 (177)
T 2esr_A 62 KNRKAQAIIQDNIIMT--KAENRFTLLKMEAERAIDCLTGRFDLVFLDPPYAKETIVATIEALAAKNLLSEQVMVVCETD 139 (177)
T ss_dssp CCHHHHHHHHHHHHTT--TCGGGEEEECSCHHHHHHHBCSCEEEEEECCSSHHHHHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHc--CCCCceEEEECcHHHhHHhhcCCCCEEEECCCCCcchHHHHHHHHHhCCCcCCCcEEEEEEC
Confidence 3677888888764211 011358899999876 455557899999976543322367778887 99999999999887
Q ss_pred CC
Q 024162 92 LT 93 (271)
Q Consensus 92 ~~ 93 (271)
..
T Consensus 140 ~~ 141 (177)
T 2esr_A 140 KT 141 (177)
T ss_dssp TT
T ss_pred Cc
Confidence 64
No 171
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=97.21 E-value=0.00073 Score=57.68 Aligned_cols=71 Identities=8% Similarity=0.007 Sum_probs=52.2
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCChHHHHHHHHHhccCCcEEEEEecC
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYKKL 92 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~~~~L~ei~RvLKPGG~l~i~~~~ 92 (271)
++.+++.++++.... ....++.+..+++.+..+++.+||+|++... ....+++++.++|||||++++....
T Consensus 122 ~~~~~~~a~~~~~~~--~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~----~~~~~l~~~~~~L~~gG~l~~~~~~ 192 (248)
T 2yvl_A 122 VEEFYKTAQKNLKKF--NLGKNVKFFNVDFKDAEVPEGIFHAAFVDVR----EPWHYLEKVHKSLMEGAPVGFLLPT 192 (248)
T ss_dssp CHHHHHHHHHHHHHT--TCCTTEEEECSCTTTSCCCTTCBSEEEECSS----CGGGGHHHHHHHBCTTCEEEEEESS
T ss_pred CHHHHHHHHHHHHHc--CCCCcEEEEEcChhhcccCCCcccEEEECCc----CHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 567777787764211 1124688999998875546779999998421 1257899999999999999999865
No 172
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=97.20 E-value=0.00027 Score=59.95 Aligned_cols=74 Identities=14% Similarity=0.123 Sum_probs=52.2
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCC-CCCCC-----CceeEEEeccccccCCh-HHHHHHHHHhccCCcEEEE
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQ-LPVES-----FSIDTVLSISSSHELPG-DQLLEEISRVLKPGGTILI 88 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~-lp~~~-----~sfD~V~s~~~l~~~~~-~~~L~ei~RvLKPGG~l~i 88 (271)
++.|++.++++.... ....++.++++++.+ ++... ++||+|++....++..+ ..++.++ |+|||||+|++
T Consensus 92 ~~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD~V~~d~~~~~~~~~~~~~~~~-~~LkpgG~lv~ 168 (221)
T 3u81_A 92 NPDCAAITQQMLNFA--GLQDKVTILNGASQDLIPQLKKKYDVDTLDMVFLDHWKDRYLPDTLLLEKC-GLLRKGTVLLA 168 (221)
T ss_dssp CHHHHHHHHHHHHHH--TCGGGEEEEESCHHHHGGGTTTTSCCCCCSEEEECSCGGGHHHHHHHHHHT-TCCCTTCEEEE
T ss_pred ChHHHHHHHHHHHHc--CCCCceEEEECCHHHHHHHHHHhcCCCceEEEEEcCCcccchHHHHHHHhc-cccCCCeEEEE
Confidence 577888888764221 112358999999754 33322 78999999776665544 5677777 99999999998
Q ss_pred EecC
Q 024162 89 YKKL 92 (271)
Q Consensus 89 ~~~~ 92 (271)
.+..
T Consensus 169 ~~~~ 172 (221)
T 3u81_A 169 DNVI 172 (221)
T ss_dssp SCCC
T ss_pred eCCC
Confidence 8765
No 173
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=97.16 E-value=0.00041 Score=58.99 Aligned_cols=71 Identities=8% Similarity=0.090 Sum_probs=52.2
Q ss_pred HHHHHHHHHHhCchhhh--cCCCCeEEEeccCCCCCCCC-CceeEEEeccccccCChHHHHHHHHHhccCCcEEEEEecC
Q 024162 16 VSAVLNAIRDLGDEAVE--QCDPQIITQASSLSQLPVES-FSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYKKL 92 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~--~~~~~v~~~~~d~e~lp~~~-~sfD~V~s~~~l~~~~~~~~L~ei~RvLKPGG~l~i~~~~ 92 (271)
++.|++.++++...... ....++.++.+++.. ++++ ++||+|++...++++. .+++++|||||+|++....
T Consensus 123 ~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~-~~~~~~~fD~I~~~~~~~~~~-----~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 123 QAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRK-GYPPNAPYNAIHVGAAAPDTP-----TELINQLASGGRLIVPVGP 196 (227)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGG-CCGGGCSEEEEEECSCBSSCC-----HHHHHTEEEEEEEEEEESC
T ss_pred CHHHHHHHHHHHHhcCccccCCCceEEEECCccc-CCCcCCCccEEEECCchHHHH-----HHHHHHhcCCCEEEEEEec
Confidence 56777888776421100 001468899999876 5554 7899999988888774 7899999999999998764
No 174
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=97.16 E-value=0.0003 Score=59.60 Aligned_cols=72 Identities=17% Similarity=0.058 Sum_probs=53.3
Q ss_pred HHHHHHHHHHhCchhhh--cCCCCeEEEeccCCCCC----CCCCceeEEEeccccccCChHHHHHHHHHhccCCcEEEEE
Q 024162 16 VSAVLNAIRDLGDEAVE--QCDPQIITQASSLSQLP----VESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIY 89 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~--~~~~~v~~~~~d~e~lp----~~~~sfD~V~s~~~l~~~~~~~~L~ei~RvLKPGG~l~i~ 89 (271)
++.|++.++++...... ....++.++.+++.... ...++||+|++...++++ +.+++++|||||+|++.
T Consensus 118 ~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~I~~~~~~~~~-----~~~~~~~LkpgG~lv~~ 192 (227)
T 2pbf_A 118 VKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKKELGLFDAIHVGASASEL-----PEILVDLLAENGKLIIP 192 (227)
T ss_dssp CHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHHHHCCEEEEEECSBBSSC-----CHHHHHHEEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCccCCCcCEEEECCchHHH-----HHHHHHhcCCCcEEEEE
Confidence 56778888776421100 00246889999998765 567889999998887766 47899999999999998
Q ss_pred ecC
Q 024162 90 KKL 92 (271)
Q Consensus 90 ~~~ 92 (271)
.+.
T Consensus 193 ~~~ 195 (227)
T 2pbf_A 193 IEE 195 (227)
T ss_dssp EEE
T ss_pred Ecc
Confidence 764
No 175
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=97.16 E-value=0.00065 Score=58.14 Aligned_cols=69 Identities=12% Similarity=0.140 Sum_probs=51.3
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCc-eeEEEeccccccCChHHHHHHHHHhccCCcEEEEEecCC
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFS-IDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYKKLT 93 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~s-fD~V~s~~~l~~~~~~~~L~ei~RvLKPGG~l~i~~~~~ 93 (271)
++.+++.++++... ....++.+..+++ ..++++.. ||+|++...++++. .++.++|||||+|++.....
T Consensus 123 ~~~~~~~a~~~~~~---~~~~~v~~~~~d~-~~~~~~~~~fD~Ii~~~~~~~~~-----~~~~~~L~pgG~lvi~~~~~ 192 (235)
T 1jg1_A 123 IPELVEFAKRNLER---AGVKNVHVILGDG-SKGFPPKAPYDVIIVTAGAPKIP-----EPLIEQLKIGGKLIIPVGSY 192 (235)
T ss_dssp CHHHHHHHHHHHHH---TTCCSEEEEESCG-GGCCGGGCCEEEEEECSBBSSCC-----HHHHHTEEEEEEEEEEECSS
T ss_pred CHHHHHHHHHHHHH---cCCCCcEEEECCc-ccCCCCCCCccEEEECCcHHHHH-----HHHHHhcCCCcEEEEEEecC
Confidence 56788888876421 1113588888987 45665544 99999988888775 47899999999999988653
No 176
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=97.13 E-value=0.00053 Score=56.40 Aligned_cols=57 Identities=19% Similarity=0.173 Sum_probs=42.2
Q ss_pred CeEEE-eccCCCCC--------CCCCceeEEEecccccc----CCh--------HHHHHHHHHhccCCcEEEEEecCC
Q 024162 37 QIITQ-ASSLSQLP--------VESFSIDTVLSISSSHE----LPG--------DQLLEEISRVLKPGGTILIYKKLT 93 (271)
Q Consensus 37 ~v~~~-~~d~e~lp--------~~~~sfD~V~s~~~l~~----~~~--------~~~L~ei~RvLKPGG~l~i~~~~~ 93 (271)
++.++ ++++...+ +++++||+|++...+++ ..+ ..++++++|+|||||+|++..+..
T Consensus 71 ~~~~~~~~d~~~~~~~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 148 (196)
T 2nyu_A 71 GATFLCPADVTDPRTSQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAG 148 (196)
T ss_dssp TCEEECSCCTTSHHHHHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCS
T ss_pred CCeEEEeccCCCHHHHHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 46777 88876653 34568999998654332 222 278999999999999999998763
No 177
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=97.11 E-value=0.0004 Score=65.08 Aligned_cols=73 Identities=18% Similarity=0.158 Sum_probs=49.1
Q ss_pred CCCCCCceeEEEeccccccCCh-HH------------------------H---------------HHHHHHhccCCcEEE
Q 024162 48 LPVESFSIDTVLSISSSHELPG-DQ------------------------L---------------LEEISRVLKPGGTIL 87 (271)
Q Consensus 48 lp~~~~sfD~V~s~~~l~~~~~-~~------------------------~---------------L~ei~RvLKPGG~l~ 87 (271)
-.|++++||+|+|++++||+.. +. + |+-.+|.|+|||+++
T Consensus 143 rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~Ra~eL~pGG~mv 222 (384)
T 2efj_A 143 RLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIHSEELISRGRML 222 (384)
T ss_dssp CCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEE
T ss_pred ccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCeEE
Confidence 4688999999999999999864 21 1 555589999999999
Q ss_pred EEecCCCCc--c-cHHHHHHHHHHHHHHcCCcchhh
Q 024162 88 IYKKLTSDK--G-DVDKAISALEGKLLLAGFLDAQR 120 (271)
Q Consensus 88 i~~~~~~~~--~-e~~~~~~~l~~~l~laGF~~v~~ 120 (271)
+...+.+.. . ............+...|.+..+.
T Consensus 223 l~~~gr~~~~~~~~~~~~l~~al~~lv~eGli~~ek 258 (384)
T 2efj_A 223 LTFICKEDEFDHPNSMDLLEMSINDLVIEGHLEEEK 258 (384)
T ss_dssp EEEECCCTTTCCCCHHHHHHHHHHHHHHHTSSCHHH
T ss_pred EEEecCCCcccCcccHHHHHHHHHHHHHhCCcchhh
Confidence 999886544 2 00012223334455567655443
No 178
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=97.10 E-value=0.00054 Score=61.68 Aligned_cols=77 Identities=18% Similarity=0.206 Sum_probs=51.7
Q ss_pred HHHHHHHHHHhCchhh--hcCCCCeEEEeccCCCC-CCCCCceeEEEeccccccCC-----hHHHHHHHHHhccCCcEEE
Q 024162 16 VSAVLNAIRDLGDEAV--EQCDPQIITQASSLSQL-PVESFSIDTVLSISSSHELP-----GDQLLEEISRVLKPGGTIL 87 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~--~~~~~~v~~~~~d~e~l-p~~~~sfD~V~s~~~l~~~~-----~~~~L~ei~RvLKPGG~l~ 87 (271)
++.|++.+|++..... ...+.++.++.+|+... ....++||+|++.....+.+ ...++++++|+|||||+|+
T Consensus 116 d~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvIi~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv 195 (294)
T 3adn_A 116 DAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFV 195 (294)
T ss_dssp CTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEEEECC----------CCHHHHHHHHHTEEEEEEEE
T ss_pred CHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEEEECCCCccCcchhccHHHHHHHHHHhcCCCCEEE
Confidence 5678888888742210 01245788899998654 44578999999955433322 2789999999999999999
Q ss_pred EEecC
Q 024162 88 IYKKL 92 (271)
Q Consensus 88 i~~~~ 92 (271)
+....
T Consensus 196 ~~~~s 200 (294)
T 3adn_A 196 AQNGV 200 (294)
T ss_dssp EEEEE
T ss_pred EecCC
Confidence 98643
No 179
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=97.08 E-value=0.0004 Score=62.84 Aligned_cols=76 Identities=14% Similarity=0.118 Sum_probs=55.7
Q ss_pred HHHHHHHHHHhCchh-hh-cCCCCeEEEeccCCC-CCCCCCceeEEEecccccc---CC-----hHHHHHHHHHhccCCc
Q 024162 16 VSAVLNAIRDLGDEA-VE-QCDPQIITQASSLSQ-LPVESFSIDTVLSISSSHE---LP-----GDQLLEEISRVLKPGG 84 (271)
Q Consensus 16 s~~mv~~ar~~~~~~-~~-~~~~~v~~~~~d~e~-lp~~~~sfD~V~s~~~l~~---~~-----~~~~L~ei~RvLKPGG 84 (271)
++.|++.++++.... .. ....++.++.+|+.. ++..+++||+|++....++ -+ ...++++++|+|||||
T Consensus 110 d~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG 189 (314)
T 1uir_A 110 DGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGG 189 (314)
T ss_dssp CHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEE
T ss_pred CHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEEEECCCCcccccCcchhccHHHHHHHHHHhcCCCc
Confidence 578899999875220 00 124678999999876 4555789999999765554 21 2789999999999999
Q ss_pred EEEEEec
Q 024162 85 TILIYKK 91 (271)
Q Consensus 85 ~l~i~~~ 91 (271)
+|++...
T Consensus 190 ~lv~~~~ 196 (314)
T 1uir_A 190 VMGMQTG 196 (314)
T ss_dssp EEEEEEE
T ss_pred EEEEEcc
Confidence 9999754
No 180
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=97.07 E-value=0.0011 Score=58.72 Aligned_cols=77 Identities=14% Similarity=0.137 Sum_probs=55.3
Q ss_pred HHHHHHHHHHhCchhh-hcCCCCeEEEeccCCC-CCCCCCceeEEEeccccccCC-----hHHHHHHHHHhccCCcEEEE
Q 024162 16 VSAVLNAIRDLGDEAV-EQCDPQIITQASSLSQ-LPVESFSIDTVLSISSSHELP-----GDQLLEEISRVLKPGGTILI 88 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~-~~~~~~v~~~~~d~e~-lp~~~~sfD~V~s~~~l~~~~-----~~~~L~ei~RvLKPGG~l~i 88 (271)
++.|++.+|+...... .....++.++.+|+.. ++...++||+|++....++.+ ..+++++++|+|||||.|++
T Consensus 108 d~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~ 187 (275)
T 1iy9_A 108 DGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVA 187 (275)
T ss_dssp CHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEE
T ss_pred CHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEE
Confidence 5788999998752210 1124678999999865 444567999999955433322 36899999999999999999
Q ss_pred EecC
Q 024162 89 YKKL 92 (271)
Q Consensus 89 ~~~~ 92 (271)
....
T Consensus 188 ~~~~ 191 (275)
T 1iy9_A 188 QTDN 191 (275)
T ss_dssp ECCC
T ss_pred EcCC
Confidence 8543
No 181
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=97.06 E-value=0.0014 Score=60.04 Aligned_cols=69 Identities=13% Similarity=0.148 Sum_probs=50.7
Q ss_pred HHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCCh---HHHHHHHHHhccCCcEEEEEe
Q 024162 19 VLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPG---DQLLEEISRVLKPGGTILIYK 90 (271)
Q Consensus 19 mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~---~~~L~ei~RvLKPGG~l~i~~ 90 (271)
|++.++++.... ....++.++.+++++++++ ++||+|++....+++.. ...+.++.|+|||||++++..
T Consensus 84 ~~~~a~~~~~~~--~l~~~v~~~~~d~~~~~~~-~~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 155 (348)
T 2y1w_A 84 MAQHAEVLVKSN--NLTDRIVVIPGKVEEVSLP-EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTI 155 (348)
T ss_dssp HHHHHHHHHHHT--TCTTTEEEEESCTTTCCCS-SCEEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESCE
T ss_pred HHHHHHHHHHHc--CCCCcEEEEEcchhhCCCC-CceeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEec
Confidence 556666653211 1224689999999998876 58999999876665542 678889999999999998653
No 182
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=97.05 E-value=0.00047 Score=59.16 Aligned_cols=72 Identities=18% Similarity=0.162 Sum_probs=52.0
Q ss_pred HHHHHHHHHHhCchhhhcCC-CCeEEEeccCCCC-C-CCCCceeEEEeccccccCCh-HHHHHHHHHhccCCcEEEEEec
Q 024162 16 VSAVLNAIRDLGDEAVEQCD-PQIITQASSLSQL-P-VESFSIDTVLSISSSHELPG-DQLLEEISRVLKPGGTILIYKK 91 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~-~~v~~~~~d~e~l-p-~~~~sfD~V~s~~~l~~~~~-~~~L~ei~RvLKPGG~l~i~~~ 91 (271)
++.|++.+++..... ... .++.++.+++.++ + +++++||+|++... ... ..++.+++|+|||||.|++.+.
T Consensus 90 ~~~~~~~a~~~~~~~--g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~dn~ 164 (221)
T 3dr5_A 90 ESEHQRQAKALFREA--GYSPSRVRFLLSRPLDVMSRLANDSYQLVFGQVS---PMDLKALVDAAWPLLRRGGALVLADA 164 (221)
T ss_dssp CHHHHHHHHHHHHHT--TCCGGGEEEECSCHHHHGGGSCTTCEEEEEECCC---TTTHHHHHHHHHHHEEEEEEEEETTT
T ss_pred CHHHHHHHHHHHHHc--CCCcCcEEEEEcCHHHHHHHhcCCCcCeEEEcCc---HHHHHHHHHHHHHHcCCCcEEEEeCC
Confidence 677888888774221 112 3689999988654 2 44789999998543 223 6799999999999999998664
Q ss_pred C
Q 024162 92 L 92 (271)
Q Consensus 92 ~ 92 (271)
.
T Consensus 165 ~ 165 (221)
T 3dr5_A 165 L 165 (221)
T ss_dssp T
T ss_pred C
Confidence 3
No 183
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=97.05 E-value=0.0045 Score=58.68 Aligned_cols=82 Identities=18% Similarity=0.221 Sum_probs=54.6
Q ss_pred EEEEecCCcccHHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCC--CCCCceeEEEec------cccccCCh-------
Q 024162 5 VLALSEDKILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLP--VESFSIDTVLSI------SSSHELPG------- 69 (271)
Q Consensus 5 vl~~td~~~~~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp--~~~~sfD~V~s~------~~l~~~~~------- 69 (271)
.++..|.+ +.+++.++++... ....++.++++|+..++ +++++||+|++. ..++..++
T Consensus 286 ~v~a~D~s----~~~l~~~~~~~~~---~g~~~v~~~~~D~~~~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~ 358 (450)
T 2yxl_A 286 KIYAFDVD----KMRMKRLKDFVKR---MGIKIVKPLVKDARKAPEIIGEEVADKVLLDAPCTSSGTIGKNPELRWRLRE 358 (450)
T ss_dssp EEEEECSC----HHHHHHHHHHHHH---TTCCSEEEECSCTTCCSSSSCSSCEEEEEEECCCCCGGGTTTSTTHHHHCCT
T ss_pred EEEEEcCC----HHHHHHHHHHHHH---cCCCcEEEEEcChhhcchhhccCCCCEEEEcCCCCCCeeeccChhhhhhCCH
Confidence 45555544 4556666555311 01136889999998876 666889999962 12222221
Q ss_pred ----------HHHHHHHHHhccCCcEEEEEecCC
Q 024162 70 ----------DQLLEEISRVLKPGGTILIYKKLT 93 (271)
Q Consensus 70 ----------~~~L~ei~RvLKPGG~l~i~~~~~ 93 (271)
..+|.+++++|||||+|++++...
T Consensus 359 ~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~ 392 (450)
T 2yxl_A 359 DKINEMSQLQRELLESAARLVKPGGRLLYTTCSI 392 (450)
T ss_dssp TSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 468999999999999999998764
No 184
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=96.99 E-value=0.00095 Score=60.42 Aligned_cols=73 Identities=16% Similarity=0.082 Sum_probs=47.6
Q ss_pred HHHHHHHHHHhCchh--------hhcCCCCeEEEeccCCCC--CCCCCceeEEEeccccccCChHHHHHHHHHhccCCcE
Q 024162 16 VSAVLNAIRDLGDEA--------VEQCDPQIITQASSLSQL--PVESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGT 85 (271)
Q Consensus 16 s~~mv~~ar~~~~~~--------~~~~~~~v~~~~~d~e~l--p~~~~sfD~V~s~~~l~~~~~~~~L~ei~RvLKPGG~ 85 (271)
++.|++.+++..... ......++.++.+++.++ ++++++||+|++..... ..++.+++++|||||+
T Consensus 139 ~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~~~~----~~~l~~~~~~LkpgG~ 214 (336)
T 2b25_A 139 RKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATEDIKSLTFDAVALDMLNP----HVTLPVFYPHLKHGGV 214 (336)
T ss_dssp SHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC-------EEEEEECSSST----TTTHHHHGGGEEEEEE
T ss_pred CHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcccccCCCCeeEEEECCCCH----HHHHHHHHHhcCCCcE
Confidence 566777777653210 000124689999999887 57778999999854322 3478999999999999
Q ss_pred EEEEecC
Q 024162 86 ILIYKKL 92 (271)
Q Consensus 86 l~i~~~~ 92 (271)
|++..+.
T Consensus 215 lv~~~~~ 221 (336)
T 2b25_A 215 CAVYVVN 221 (336)
T ss_dssp EEEEESS
T ss_pred EEEEeCC
Confidence 9988764
No 185
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=96.97 E-value=0.0011 Score=61.51 Aligned_cols=77 Identities=10% Similarity=0.123 Sum_probs=53.0
Q ss_pred CCCCCCCCCceeEEEeccccccCCh-H---------------------------------HHHHHHHHhccCCcEEEEEe
Q 024162 45 LSQLPVESFSIDTVLSISSSHELPG-D---------------------------------QLLEEISRVLKPGGTILIYK 90 (271)
Q Consensus 45 ~e~lp~~~~sfD~V~s~~~l~~~~~-~---------------------------------~~L~ei~RvLKPGG~l~i~~ 90 (271)
.-.-.|++++||+|+|++++||+.. + .+|+..+|.|+|||++++..
T Consensus 130 Fy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~ 209 (359)
T 1m6e_X 130 FYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTI 209 (359)
T ss_dssp SSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEE
T ss_pred hhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEE
Confidence 3345799999999999999999854 2 23888899999999999998
Q ss_pred cCCCCcc-------cHHHHHHHHHHHHHHcCCcchhhh
Q 024162 91 KLTSDKG-------DVDKAISALEGKLLLAGFLDAQRI 121 (271)
Q Consensus 91 ~~~~~~~-------e~~~~~~~l~~~l~laGF~~v~~~ 121 (271)
.+.+... .+-.......+.+...|.+..+.+
T Consensus 210 ~gr~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~ek~ 247 (359)
T 1m6e_X 210 LGRRSEDRASTECCLIWQLLAMALNQMVSEGLIEEEKM 247 (359)
T ss_dssp EECSSSSSSSTTTSTTTHHHHHHHHHHHHTTCSCCSTT
T ss_pred ecCCCCCccccchHHHHHHHHHHHHHHHHccccchhhh
Confidence 7764321 111222233344566787765443
No 186
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=96.96 E-value=0.00039 Score=55.86 Aligned_cols=101 Identities=15% Similarity=0.171 Sum_probs=63.1
Q ss_pred ccEEEEecCCcccHHHHHHHHHHhCchhhhcCCCCe-EEEeccC--CCCCCCCCceeEEEeccccc---cCChHHHHHHH
Q 024162 3 SAVLALSEDKILPVSAVLNAIRDLGDEAVEQCDPQI-ITQASSL--SQLPVESFSIDTVLSISSSH---ELPGDQLLEEI 76 (271)
Q Consensus 3 ~~vl~~td~~~~~s~~mv~~ar~~~~~~~~~~~~~v-~~~~~d~--e~lp~~~~sfD~V~s~~~l~---~~~~~~~L~ei 76 (271)
...|++-..+...-++.++.++....+. .+..+ .+...++ -...+++++||.|+...... ..-+..+++.+
T Consensus 8 ~~~LLL~~Psv~t~pe~le~~k~~~~~~---~~~~~d~qmlDRLa~G~VsLp~stYD~V~~lt~~~~~~~~l~r~li~~l 84 (136)
T 2km1_A 8 KTGLLLIHPAVTTTPELVENTKAQAASK---KVKFVDQFLINKLNDGSITLENAKYETVHYLTPEAQTDIKFPKKLISVL 84 (136)
T ss_dssp EEEEEEECHHHHTSHHHHHHHHHHHHHT---TEEEEEEEEHHHHHHTCCCCCSSSCCSEEEECCCSSCSCCCCHHHHHHH
T ss_pred CCeEEecCCcccCCHHHHHHHHHhhhcc---ccchhhHHHHHHHhcCcccCCcccccEEEEecCCccchhhcCHHHHHHH
Confidence 3566666666555566666666543210 00011 1222233 24568899999999865322 12238999999
Q ss_pred HHhccCCcEEEEEecCCCCcccHHHHHHHHHHHHHHcCCcchh
Q 024162 77 SRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQ 119 (271)
Q Consensus 77 ~RvLKPGG~l~i~~~~~~~~~e~~~~~~~l~~~l~laGF~~v~ 119 (271)
++.|||||+|.. .. . ....++.++||+...
T Consensus 85 ~~aLkpgG~L~g--l~-----~------~~~~EailaGfvv~~ 114 (136)
T 2km1_A 85 ADSLKPNGSLIG--LS-----D------IYKVDALINGFEIIN 114 (136)
T ss_dssp HTTCCTTCCEEC--CC-----H------HHHHHHHHHTEEEEC
T ss_pred HHHhCCCCEEEe--cC-----c------chhhHHHhhccEecc
Confidence 999999999996 11 1 346789999999655
No 187
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=96.95 E-value=0.00086 Score=58.19 Aligned_cols=72 Identities=17% Similarity=0.119 Sum_probs=51.6
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCC-CCCC--CCceeEEEeccccccCCh-HHHHHHHHHhccCCcEEEEEec
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQ-LPVE--SFSIDTVLSISSSHELPG-DQLLEEISRVLKPGGTILIYKK 91 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~-lp~~--~~sfD~V~s~~~l~~~~~-~~~L~ei~RvLKPGG~l~i~~~ 91 (271)
++.|++.++++.... ....+|.++++++.+ ++.. .++||+|++... ... ..++.++.|+|||||+|++.+.
T Consensus 97 s~~~~~~a~~~~~~~--g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~~~~ 171 (248)
T 3tfw_A 97 DAHHAQVARENLQLA--GVDQRVTLREGPALQSLESLGECPAFDLIFIDAD---KPNNPHYLRWALRYSRPGTLIIGDNV 171 (248)
T ss_dssp CHHHHHHHHHHHHHT--TCTTTEEEEESCHHHHHHTCCSCCCCSEEEECSC---GGGHHHHHHHHHHTCCTTCEEEEECC
T ss_pred CHHHHHHHHHHHHHc--CCCCcEEEEEcCHHHHHHhcCCCCCeEEEEECCc---hHHHHHHHHHHHHhcCCCeEEEEeCC
Confidence 577888888764221 122468999999865 4433 348999998542 333 7899999999999999998875
Q ss_pred C
Q 024162 92 L 92 (271)
Q Consensus 92 ~ 92 (271)
.
T Consensus 172 ~ 172 (248)
T 3tfw_A 172 V 172 (248)
T ss_dssp S
T ss_pred C
Confidence 4
No 188
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=96.95 E-value=3.9e-05 Score=65.77 Aligned_cols=72 Identities=11% Similarity=0.021 Sum_probs=54.8
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCCh-HHHHHHHHHhccCCcEEEEEe
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPG-DQLLEEISRVLKPGGTILIYK 90 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~-~~~L~ei~RvLKPGG~l~i~~ 90 (271)
++.|++.++++.... ....++.++++|+.+++ ++++||+|++...+++... ...+.+++++|+|||.+++..
T Consensus 109 s~~~~~~a~~~~~~~--~~~~~~~~~~~d~~~~~-~~~~~D~v~~~~~~~~~~~~~~~~~~~~~~L~pgG~~i~~~ 181 (241)
T 3gdh_A 109 DPVKIALARNNAEVY--GIADKIEFICGDFLLLA-SFLKADVVFLSPPWGGPDYATAETFDIRTMMSPDGFEIFRL 181 (241)
T ss_dssp CHHHHHHHHHHHHHT--TCGGGEEEEESCHHHHG-GGCCCSEEEECCCCSSGGGGGSSSBCTTTSCSSCHHHHHHH
T ss_pred CHHHHHHHHHHHHHc--CCCcCeEEEECChHHhc-ccCCCCEEEECCCcCCcchhhhHHHHHHhhcCCcceeHHHH
Confidence 577888888764211 01136899999998877 6789999999988888766 557889999999999976553
No 189
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=96.94 E-value=0.0019 Score=59.19 Aligned_cols=76 Identities=17% Similarity=0.221 Sum_probs=53.7
Q ss_pred cHHHHHHHHHHhCchh-hhcCCCCeEEEeccCCCC--CCCCCceeEEEecccccc--CC---hHHHHHHHHHhccCCcEE
Q 024162 15 PVSAVLNAIRDLGDEA-VEQCDPQIITQASSLSQL--PVESFSIDTVLSISSSHE--LP---GDQLLEEISRVLKPGGTI 86 (271)
Q Consensus 15 ~s~~mv~~ar~~~~~~-~~~~~~~v~~~~~d~e~l--p~~~~sfD~V~s~~~l~~--~~---~~~~L~ei~RvLKPGG~l 86 (271)
.++.|++.+|++.... ......++.++++|+... .+++++||+|++.....+ .. ...++++++|+|||||+|
T Consensus 152 is~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~l 231 (334)
T 1xj5_A 152 IDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVV 231 (334)
T ss_dssp SCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEE
T ss_pred CCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEE
Confidence 3678899999875321 011235789999998654 245679999998543211 11 278999999999999999
Q ss_pred EEEe
Q 024162 87 LIYK 90 (271)
Q Consensus 87 ~i~~ 90 (271)
++..
T Consensus 232 v~~~ 235 (334)
T 1xj5_A 232 CTQA 235 (334)
T ss_dssp EEEC
T ss_pred EEec
Confidence 9974
No 190
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=96.93 E-value=0.00088 Score=57.40 Aligned_cols=72 Identities=11% Similarity=0.106 Sum_probs=52.2
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCC-C-CCCCceeEEEeccccccCCh-HHHHHHHHHhccCCcEEEEEecC
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQL-P-VESFSIDTVLSISSSHELPG-DQLLEEISRVLKPGGTILIYKKL 92 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~l-p-~~~~sfD~V~s~~~l~~~~~-~~~L~ei~RvLKPGG~l~i~~~~ 92 (271)
++.|++.++++.... ....++.++.+++.+. + ..+++||+|++... ... ..++++++++|||||+|++.+..
T Consensus 104 ~~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~~---~~~~~~~l~~~~~~LkpgG~lv~d~~~ 178 (232)
T 3ntv_A 104 NETMIQYAKQNLATY--HFENQVRIIEGNALEQFENVNDKVYDMIFIDAA---KAQSKKFFEIYTPLLKHQGLVITDNVL 178 (232)
T ss_dssp CHHHHHHHHHHHHHT--TCTTTEEEEESCGGGCHHHHTTSCEEEEEEETT---SSSHHHHHHHHGGGEEEEEEEEEECTT
T ss_pred CHHHHHHHHHHHHHc--CCCCcEEEEECCHHHHHHhhccCCccEEEEcCc---HHHHHHHHHHHHHhcCCCeEEEEeeCC
Confidence 577888888764221 1123689999999764 4 44789999997542 333 78999999999999999886543
No 191
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=96.92 E-value=0.0017 Score=56.36 Aligned_cols=54 Identities=13% Similarity=0.090 Sum_probs=41.6
Q ss_pred CCeEEEeccCCCC-CCC-----CCceeEEEeccccccCCh-HHHHHHHHHhccCCcEEEEEecC
Q 024162 36 PQIITQASSLSQL-PVE-----SFSIDTVLSISSSHELPG-DQLLEEISRVLKPGGTILIYKKL 92 (271)
Q Consensus 36 ~~v~~~~~d~e~l-p~~-----~~sfD~V~s~~~l~~~~~-~~~L~ei~RvLKPGG~l~i~~~~ 92 (271)
.+|.++++++.++ +.. .++||+|++... ... ..++++++|+|||||.|++.+..
T Consensus 112 ~~i~~~~gda~~~l~~~~~~~~~~~fD~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~d~~~ 172 (242)
T 3r3h_A 112 HKIKLRLGPALDTLHSLLNEGGEHQFDFIFIDAD---KTNYLNYYELALKLVTPKGLIAIDNIF 172 (242)
T ss_dssp TTEEEEESCHHHHHHHHHHHHCSSCEEEEEEESC---GGGHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred CcEEEEEcCHHHHHHHHhhccCCCCEeEEEEcCC---hHHhHHHHHHHHHhcCCCeEEEEECCc
Confidence 4689999998654 321 579999998543 233 77899999999999999997754
No 192
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=96.92 E-value=0.0019 Score=57.23 Aligned_cols=53 Identities=13% Similarity=0.204 Sum_probs=42.3
Q ss_pred CeEEE--eccCCCCCCCCCceeEEEeccccccCC----h-H---HHHHHHHHhccCCc--EEEEEecC
Q 024162 37 QIITQ--ASSLSQLPVESFSIDTVLSISSSHELP----G-D---QLLEEISRVLKPGG--TILIYKKL 92 (271)
Q Consensus 37 ~v~~~--~~d~e~lp~~~~sfD~V~s~~~l~~~~----~-~---~~L~ei~RvLKPGG--~l~i~~~~ 92 (271)
++.++ ++|+..++ +++||+|++..+ ++.. + . .+|.+++|+||||| .|++..+.
T Consensus 123 ~v~~~~~~~D~~~l~--~~~fD~V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 123 NIVKFKSRVDIHTLP--VERTDVIMCDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp GGEEEECSCCTTTSC--CCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred CeEEEecccCHhHCC--CCCCcEEEEeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 67888 89998876 789999999765 3322 1 1 37899999999999 99998876
No 193
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=96.91 E-value=0.0006 Score=57.14 Aligned_cols=72 Identities=14% Similarity=0.151 Sum_probs=50.6
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCC-CCCCCceeEEEeccccccCChHHHHHHHHHhccCCcEEEEEecC
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQL-PVESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYKKL 92 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~l-p~~~~sfD~V~s~~~l~~~~~~~~L~ei~RvLKPGG~l~i~~~~ 92 (271)
++.|++.++++.... ....++.++++++.++ +..++ ||+|++... ......++++++|+|||||+|++.+..
T Consensus 90 ~~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~~~--~~~~~~~l~~~~~~LkpgG~lv~~~~~ 162 (210)
T 3c3p_A 90 DRDNVEHARRMLHDN--GLIDRVELQVGDPLGIAAGQRD-IDILFMDCD--VFNGADVLERMNRCLAKNALLIAVNAL 162 (210)
T ss_dssp CHHHHHHHHHHHHHH--SGGGGEEEEESCHHHHHTTCCS-EEEEEEETT--TSCHHHHHHHHGGGEEEEEEEEEESSS
T ss_pred CHHHHHHHHHHHHHC--CCCceEEEEEecHHHHhccCCC-CCEEEEcCC--hhhhHHHHHHHHHhcCCCeEEEEECcc
Confidence 577888888764211 1123588999988653 55456 999998632 112278999999999999999987643
No 194
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=96.90 E-value=0.0019 Score=57.87 Aligned_cols=77 Identities=13% Similarity=0.072 Sum_probs=52.7
Q ss_pred HHHHHHHHHHhCchh-hhcCCCCeEEEeccCCC-CCCCCCceeEEEeccccccC------ChHHHHHHHHHhccCCcEEE
Q 024162 16 VSAVLNAIRDLGDEA-VEQCDPQIITQASSLSQ-LPVESFSIDTVLSISSSHEL------PGDQLLEEISRVLKPGGTIL 87 (271)
Q Consensus 16 s~~mv~~ar~~~~~~-~~~~~~~v~~~~~d~e~-lp~~~~sfD~V~s~~~l~~~------~~~~~L~ei~RvLKPGG~l~ 87 (271)
++.|++.++++.... ......++.++.+|+.. ++...++||+|++....++. ....++++++++|||||+|+
T Consensus 123 d~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv 202 (296)
T 1inl_A 123 DGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFS 202 (296)
T ss_dssp CHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEEEEC----------CCSHHHHHHHHHHEEEEEEEE
T ss_pred CHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEEEcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEE
Confidence 578888888875220 01124678999998765 44556789999985432212 12789999999999999999
Q ss_pred EEecC
Q 024162 88 IYKKL 92 (271)
Q Consensus 88 i~~~~ 92 (271)
+....
T Consensus 203 ~~~~~ 207 (296)
T 1inl_A 203 AETED 207 (296)
T ss_dssp EECCC
T ss_pred EEccC
Confidence 98543
No 195
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=96.88 E-value=0.0016 Score=58.76 Aligned_cols=77 Identities=10% Similarity=0.123 Sum_probs=53.1
Q ss_pred HHHHHHHHHHhCchh-hhcCCCCeEEEeccCCC-CCCCCCceeEEEeccccccCC-----hHHHHHHHHHhccCCcEEEE
Q 024162 16 VSAVLNAIRDLGDEA-VEQCDPQIITQASSLSQ-LPVESFSIDTVLSISSSHELP-----GDQLLEEISRVLKPGGTILI 88 (271)
Q Consensus 16 s~~mv~~ar~~~~~~-~~~~~~~v~~~~~d~e~-lp~~~~sfD~V~s~~~l~~~~-----~~~~L~ei~RvLKPGG~l~i 88 (271)
++.|++.++++...- ......++.++.+|+.. ++..+++||+|++....++.+ ...++++++|+|||||+|++
T Consensus 128 d~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~ 207 (304)
T 2o07_A 128 DEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCC 207 (304)
T ss_dssp CHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEEEECC-----------CHHHHHHHHHEEEEEEEEE
T ss_pred CHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEE
Confidence 678899999875220 01124678999998865 455578999999855433221 25789999999999999999
Q ss_pred EecC
Q 024162 89 YKKL 92 (271)
Q Consensus 89 ~~~~ 92 (271)
....
T Consensus 208 ~~~~ 211 (304)
T 2o07_A 208 QGEC 211 (304)
T ss_dssp EEEC
T ss_pred ecCC
Confidence 8743
No 196
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=96.87 E-value=0.0074 Score=56.70 Aligned_cols=82 Identities=18% Similarity=0.202 Sum_probs=55.1
Q ss_pred cEEEEecCCcccHHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCC--CCCCceeEEEecc------ccccCCh------
Q 024162 4 AVLALSEDKILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLP--VESFSIDTVLSIS------SSHELPG------ 69 (271)
Q Consensus 4 ~vl~~td~~~~~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp--~~~~sfD~V~s~~------~l~~~~~------ 69 (271)
..++..|.+..-...+.+.++..+ ..+.++++|+..++ +++++||+|++.. .++..++
T Consensus 271 ~~v~a~D~~~~~l~~~~~~~~~~g--------~~~~~~~~D~~~~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~ 342 (429)
T 1sqg_A 271 AQVVAVDIDEQRLSRVYDNLKRLG--------MKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRR 342 (429)
T ss_dssp CEEEEEESSTTTHHHHHHHHHHTT--------CCCEEEECCTTCTHHHHTTCCEEEEEEECCCCCGGGTTTCTTHHHHCC
T ss_pred CEEEEECCCHHHHHHHHHHHHHcC--------CCeEEEeCchhhchhhcccCCCCEEEEeCCCCcccccCCCcchhhcCC
Confidence 456666666555544444443332 34678889998876 6678999999621 1222221
Q ss_pred -----------HHHHHHHHHhccCCcEEEEEecCC
Q 024162 70 -----------DQLLEEISRVLKPGGTILIYKKLT 93 (271)
Q Consensus 70 -----------~~~L~ei~RvLKPGG~l~i~~~~~ 93 (271)
..+|.+++++|||||+|++++...
T Consensus 343 ~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~ 377 (429)
T 1sqg_A 343 DRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSV 377 (429)
T ss_dssp TTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 378999999999999999998653
No 197
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=96.86 E-value=0.00069 Score=61.56 Aligned_cols=76 Identities=14% Similarity=0.121 Sum_probs=51.3
Q ss_pred HHHHHHHHHHhCchhh-hcCCCCeEEEeccCCC-CCCCCCceeEEEeccccccCCh-----HHHHHHHHHhccCCcEEEE
Q 024162 16 VSAVLNAIRDLGDEAV-EQCDPQIITQASSLSQ-LPVESFSIDTVLSISSSHELPG-----DQLLEEISRVLKPGGTILI 88 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~-~~~~~~v~~~~~d~e~-lp~~~~sfD~V~s~~~l~~~~~-----~~~L~ei~RvLKPGG~l~i 88 (271)
++.|++.+|++..... .....++.++.+|+.. ++..+++||+|++....++.+. ..++++++|+|+|||+|++
T Consensus 141 d~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~ 220 (314)
T 2b2c_A 141 DEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSS 220 (314)
T ss_dssp CHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEEECCC-------------HHHHHHHHEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEEEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEE
Confidence 6789999998752210 1124678999998865 3445778999998553332221 6889999999999999999
Q ss_pred Eec
Q 024162 89 YKK 91 (271)
Q Consensus 89 ~~~ 91 (271)
...
T Consensus 221 ~~~ 223 (314)
T 2b2c_A 221 QGE 223 (314)
T ss_dssp ECC
T ss_pred ECC
Confidence 863
No 198
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=96.85 E-value=0.0013 Score=56.81 Aligned_cols=53 Identities=15% Similarity=0.130 Sum_probs=39.5
Q ss_pred EEeccCCCCCC-----CCCceeEEEeccccccCC--------h--HHHHHHHHHhccCCcEEEEEecC
Q 024162 40 TQASSLSQLPV-----ESFSIDTVLSISSSHELP--------G--DQLLEEISRVLKPGGTILIYKKL 92 (271)
Q Consensus 40 ~~~~d~e~lp~-----~~~sfD~V~s~~~l~~~~--------~--~~~L~ei~RvLKPGG~l~i~~~~ 92 (271)
+.++|+.+... ...+||+|++...++... . ..++++++++|||||+|++....
T Consensus 149 ~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 216 (250)
T 1o9g_A 149 IRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAVIAVTDRS 216 (250)
T ss_dssp EEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCEEEEEESS
T ss_pred eeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcEEEEeCcc
Confidence 88898876421 445899999976544332 1 58999999999999999995543
No 199
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=96.79 E-value=0.0022 Score=57.11 Aligned_cols=54 Identities=24% Similarity=0.262 Sum_probs=42.7
Q ss_pred CeEEE--eccCCCCCCCCCceeEEEeccccccCC----h-H---HHHHHHHHhccCCc--EEEEEecCC
Q 024162 37 QIITQ--ASSLSQLPVESFSIDTVLSISSSHELP----G-D---QLLEEISRVLKPGG--TILIYKKLT 93 (271)
Q Consensus 37 ~v~~~--~~d~e~lp~~~~sfD~V~s~~~l~~~~----~-~---~~L~ei~RvLKPGG--~l~i~~~~~ 93 (271)
++.++ ++|+..+| +++||+|++..+ ++.. + . .+|.++.|+||||| .|++..+.+
T Consensus 131 ~v~~~~~~~D~~~l~--~~~fD~Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~~ 196 (276)
T 2wa2_A 131 NLITFKSKVDVTKME--PFQADTVLCDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLNP 196 (276)
T ss_dssp GGEEEECSCCGGGCC--CCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESCC
T ss_pred CeEEEeccCcHhhCC--CCCcCEEEECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCCC
Confidence 67888 89998876 789999999766 3322 1 1 37999999999999 999987763
No 200
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=96.77 E-value=0.0012 Score=58.72 Aligned_cols=77 Identities=17% Similarity=0.133 Sum_probs=54.2
Q ss_pred HHHHHHHHHHhCchh-hhcCCCCeEEEeccCCCC-CCCCCceeEEEeccccccCC-----hHHHHHHHHHhccCCcEEEE
Q 024162 16 VSAVLNAIRDLGDEA-VEQCDPQIITQASSLSQL-PVESFSIDTVLSISSSHELP-----GDQLLEEISRVLKPGGTILI 88 (271)
Q Consensus 16 s~~mv~~ar~~~~~~-~~~~~~~v~~~~~d~e~l-p~~~~sfD~V~s~~~l~~~~-----~~~~L~ei~RvLKPGG~l~i 88 (271)
++.|++.++++.... ......++.++.+|+... +...++||+|++....++.+ ...++++++|+|||||+|++
T Consensus 111 d~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~ 190 (283)
T 2i7c_A 111 DETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVA 190 (283)
T ss_dssp CHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEE
T ss_pred CHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEE
Confidence 578899999874211 011246789999998653 33367899999854333222 16899999999999999999
Q ss_pred EecC
Q 024162 89 YKKL 92 (271)
Q Consensus 89 ~~~~ 92 (271)
....
T Consensus 191 ~~~~ 194 (283)
T 2i7c_A 191 QCES 194 (283)
T ss_dssp ECCC
T ss_pred ECCC
Confidence 8643
No 201
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=96.76 E-value=0.0006 Score=54.51 Aligned_cols=73 Identities=8% Similarity=0.099 Sum_probs=51.7
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCC-C-CC--CCceeEEEeccccccCChHHHHHHHH--HhccCCcEEEEE
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQL-P-VE--SFSIDTVLSISSSHELPGDQLLEEIS--RVLKPGGTILIY 89 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~l-p-~~--~~sfD~V~s~~~l~~~~~~~~L~ei~--RvLKPGG~l~i~ 89 (271)
++.|++.++++.... . .++.++++++.+. + ++ .++||+|++...++ -....+++.+. ++|||||++++.
T Consensus 72 ~~~~~~~a~~~~~~~---~-~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~~~~-~~~~~~~~~~~~~~~L~~gG~~~~~ 146 (171)
T 1ws6_A 72 DPEAVRLLKENVRRT---G-LGARVVALPVEVFLPEAKAQGERFTVAFMAPPYA-MDLAALFGELLASGLVEAGGLYVLQ 146 (171)
T ss_dssp CHHHHHHHHHHHHHH---T-CCCEEECSCHHHHHHHHHHTTCCEEEEEECCCTT-SCTTHHHHHHHHHTCEEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHc---C-CceEEEeccHHHHHHhhhccCCceEEEEECCCCc-hhHHHHHHHHHhhcccCCCcEEEEE
Confidence 577888888764221 1 2678889988763 3 21 34899999987665 22266777777 999999999998
Q ss_pred ecCC
Q 024162 90 KKLT 93 (271)
Q Consensus 90 ~~~~ 93 (271)
....
T Consensus 147 ~~~~ 150 (171)
T 1ws6_A 147 HPKD 150 (171)
T ss_dssp EETT
T ss_pred eCCc
Confidence 8763
No 202
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=96.75 E-value=0.0011 Score=63.71 Aligned_cols=68 Identities=13% Similarity=0.155 Sum_probs=50.3
Q ss_pred HHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCC-h--HHHHHHHHHhccCCcEEEEE
Q 024162 19 VLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELP-G--DQLLEEISRVLKPGGTILIY 89 (271)
Q Consensus 19 mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~-~--~~~L~ei~RvLKPGG~l~i~ 89 (271)
|++.++++.... ....+|.++++++++++++ ++||+|++....+++. . ...+.++.|+|||||++++.
T Consensus 192 ~l~~A~~~~~~~--gl~~~v~~~~~d~~~~~~~-~~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~~ 262 (480)
T 3b3j_A 192 MAQHAEVLVKSN--NLTDRIVVIPGKVEEVSLP-EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPT 262 (480)
T ss_dssp HHHHHHHHHHHT--TCTTTEEEEESCTTTCCCS-SCEEEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEESC
T ss_pred HHHHHHHHHHHc--CCCCcEEEEECchhhCccC-CCeEEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEEE
Confidence 777777763211 1224689999999988776 5899999977655543 2 56777889999999999854
No 203
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=96.73 E-value=0.0021 Score=56.68 Aligned_cols=71 Identities=11% Similarity=0.041 Sum_probs=52.8
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCChHHHHHHHHHhccCCcEEEEEecCC
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYKKLT 93 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~~~~L~ei~RvLKPGG~l~i~~~~~ 93 (271)
++.|++.+++..... .-.++.++++|+..++. .++||+|++.... ....++.++.++|||||+++++.+..
T Consensus 152 s~~av~~a~~n~~~n---~l~~~~~~~~d~~~~~~-~~~~D~Vi~d~p~---~~~~~l~~~~~~LkpgG~l~~s~~~~ 222 (272)
T 3a27_A 152 NPTAYHYLCENIKLN---KLNNVIPILADNRDVEL-KDVADRVIMGYVH---KTHKFLDKTFEFLKDRGVIHYHETVA 222 (272)
T ss_dssp CHHHHHHHHHHHHHT---TCSSEEEEESCGGGCCC-TTCEEEEEECCCS---SGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHc---CCCCEEEEECChHHcCc-cCCceEEEECCcc---cHHHHHHHHHHHcCCCCEEEEEEcCc
Confidence 567777777753211 11357899999988754 6789999987543 23678999999999999999998753
No 204
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=96.73 E-value=0.00036 Score=59.60 Aligned_cols=70 Identities=9% Similarity=0.020 Sum_probs=52.1
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCCh-HHHHHHHHHhccCCcEEEEEe
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPG-DQLLEEISRVLKPGGTILIYK 90 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~-~~~L~ei~RvLKPGG~l~i~~ 90 (271)
++.|+++++++.... ....++.+ .+.... .+.+.||+|+++.++|++.+ +..+..+++.|||||.|+-.+
T Consensus 82 ~~~~leiar~~~~~~--g~~~~v~~--~d~~~~-~~~~~~DvVLa~k~LHlL~~~~~al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 82 DRAEIAFLSSIIGKL--KTTIKYRF--LNKESD-VYKGTYDVVFLLKMLPVLKQQDVNILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp CHHHHHHHHHHHHHS--CCSSEEEE--ECCHHH-HTTSEEEEEEEETCHHHHHHTTCCHHHHHHTCEEEEEEEEEE
T ss_pred CHHHHHHHHHHHHhc--CCCccEEE--eccccc-CCCCCcChhhHhhHHHhhhhhHHHHHHHHHHhCCCCEEEEeC
Confidence 688999999985321 01113444 555433 56788999999999999954 667779999999999998887
No 205
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=96.72 E-value=9.3e-05 Score=64.32 Aligned_cols=63 Identities=16% Similarity=0.075 Sum_probs=39.8
Q ss_pred CCCCceeEEEeccccccCChHHHHHHHHHhccCCcEEEEEe---cCCCC--------c---ccHHHHHHHHHHHHHHcCC
Q 024162 50 VESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYK---KLTSD--------K---GDVDKAISALEGKLLLAGF 115 (271)
Q Consensus 50 ~~~~sfD~V~s~~~l~~~~~~~~L~ei~RvLKPGG~l~i~~---~~~~~--------~---~e~~~~~~~l~~~l~laGF 115 (271)
++..+||++++.. ..+|++++|+|||||+|++.. +.... . .......+.+...+..+||
T Consensus 104 ~d~~~~D~v~~~l-------~~~l~~i~rvLkpgG~lv~~~~p~~e~~~~~~~~~G~~~d~~~~~~~~~~l~~~l~~aGf 176 (232)
T 3opn_A 104 PSFTSIDVSFISL-------DLILPPLYEILEKNGEVAALIKPQFEAGREQVGKNGIIRDPKVHQMTIEKVLKTATQLGF 176 (232)
T ss_dssp CSEEEECCSSSCG-------GGTHHHHHHHSCTTCEEEEEECHHHHSCHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHTE
T ss_pred CCEEEEEEEhhhH-------HHHHHHHHHhccCCCEEEEEECcccccCHHHhCcCCeecCcchhHHHHHHHHHHHHHCCC
Confidence 3445666655432 578999999999999999873 11110 0 0011234567777889999
Q ss_pred cchh
Q 024162 116 LDAQ 119 (271)
Q Consensus 116 ~~v~ 119 (271)
..+.
T Consensus 177 ~v~~ 180 (232)
T 3opn_A 177 SVKG 180 (232)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8644
No 206
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=96.71 E-value=0.0024 Score=54.26 Aligned_cols=73 Identities=15% Similarity=0.089 Sum_probs=52.5
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCC-CCC--CCceeEEEeccccccCChHHHHHHHHHhccCCcEEEEEecC
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQL-PVE--SFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYKKL 92 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~l-p~~--~~sfD~V~s~~~l~~~~~~~~L~ei~RvLKPGG~l~i~~~~ 92 (271)
++.+++.++++.... ....++.++.+++... +.. +++||+|++....+ ....+++++.++|||||+|++.+..
T Consensus 87 ~~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~~~~~--~~~~~l~~~~~~L~pgG~lv~~~~~ 162 (233)
T 2gpy_A 87 DERRYEEAHKHVKAL--GLESRIELLFGDALQLGEKLELYPLFDVLFIDAAKG--QYRRFFDMYSPMVRPGGLILSDNVL 162 (233)
T ss_dssp CHHHHHHHHHHHHHT--TCTTTEEEECSCGGGSHHHHTTSCCEEEEEEEGGGS--CHHHHHHHHGGGEEEEEEEEEETTT
T ss_pred CHHHHHHHHHHHHHc--CCCCcEEEEECCHHHHHHhcccCCCccEEEECCCHH--HHHHHHHHHHHHcCCCeEEEEEcCC
Confidence 567778887763211 1123588999988764 433 57899999865532 2278999999999999999998654
No 207
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=96.70 E-value=0.0045 Score=54.48 Aligned_cols=82 Identities=11% Similarity=0.043 Sum_probs=54.5
Q ss_pred EEEEecCCcccHHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCC----CCCceeEEEeccccc---cC----------
Q 024162 5 VLALSEDKILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPV----ESFSIDTVLSISSSH---EL---------- 67 (271)
Q Consensus 5 vl~~td~~~~~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~----~~~sfD~V~s~~~l~---~~---------- 67 (271)
-++..|. ++.+++.++++... ....++.++.+|+..++. ..++||+|++..... .+
T Consensus 110 ~v~avD~----~~~~l~~~~~~~~~---~g~~~v~~~~~D~~~~~~~~~~~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~ 182 (274)
T 3ajd_A 110 TIVAVEI----SKTRTKALKSNINR---MGVLNTIIINADMRKYKDYLLKNEIFFDKILLDAPCSGNIIKDKNRNVSEED 182 (274)
T ss_dssp EEEEEES----CHHHHHHHHHHHHH---TTCCSEEEEESCHHHHHHHHHHTTCCEEEEEEEECCC------------HHH
T ss_pred EEEEECC----CHHHHHHHHHHHHH---hCCCcEEEEeCChHhcchhhhhccccCCEEEEcCCCCCCcccccCCCCCHHH
Confidence 3444454 45666666665321 111368899999887765 367899999852211 11
Q ss_pred -----Ch-HHHHHHHHHhccCCcEEEEEecCC
Q 024162 68 -----PG-DQLLEEISRVLKPGGTILIYKKLT 93 (271)
Q Consensus 68 -----~~-~~~L~ei~RvLKPGG~l~i~~~~~ 93 (271)
.. ..+|.+++++|||||+|++++...
T Consensus 183 ~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~ 214 (274)
T 3ajd_A 183 IKYCSLRQKELIDIGIDLLKKDGELVYSTCSM 214 (274)
T ss_dssp HTGGGTCHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCEEEEEECCC
Confidence 12 788999999999999999988654
No 208
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=96.68 E-value=0.0027 Score=57.24 Aligned_cols=67 Identities=13% Similarity=0.073 Sum_probs=47.0
Q ss_pred CCCceeEEEeccccccCChHHHHHHHHHhccCCcEEEEE---ecCCC--------C---cccHHHHHHHHHHHHHHcCCc
Q 024162 51 ESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIY---KKLTS--------D---KGDVDKAISALEGKLLLAGFL 116 (271)
Q Consensus 51 ~~~sfD~V~s~~~l~~~~~~~~L~ei~RvLKPGG~l~i~---~~~~~--------~---~~e~~~~~~~l~~~l~laGF~ 116 (271)
+..+||+|++..+++++ ..+|.+++|+|||||+|++. .+..+ . ..........+...+..+||.
T Consensus 148 ~~~~fD~v~~d~sf~sl--~~vL~e~~rvLkpGG~lv~lvkPqfe~~~~~~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf~ 225 (291)
T 3hp7_A 148 TEGLPSFASIDVSFISL--NLILPALAKILVDGGQVVALVKPQFEAGREQIGKNGIVRESSIHEKVLETVTAFAVDYGFS 225 (291)
T ss_dssp TTCCCSEEEECCSSSCG--GGTHHHHHHHSCTTCEEEEEECGGGTSCGGGCC-CCCCCCHHHHHHHHHHHHHHHHHTTEE
T ss_pred CCCCCCEEEEEeeHhhH--HHHHHHHHHHcCcCCEEEEEECcccccChhhcCCCCccCCHHHHHHHHHHHHHHHHHCCCE
Confidence 44579999987766654 67999999999999999987 23221 1 011233455677778899998
Q ss_pred chh
Q 024162 117 DAQ 119 (271)
Q Consensus 117 ~v~ 119 (271)
...
T Consensus 226 v~~ 228 (291)
T 3hp7_A 226 VKG 228 (291)
T ss_dssp EEE
T ss_pred EEE
Confidence 644
No 209
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=96.65 E-value=0.0016 Score=59.11 Aligned_cols=77 Identities=18% Similarity=0.141 Sum_probs=54.0
Q ss_pred HHHHHHHHHHhCchh-hhcCCCCeEEEeccCCC-CCCCCCceeEEEeccccccCC-----hHHHHHHHHHhccCCcEEEE
Q 024162 16 VSAVLNAIRDLGDEA-VEQCDPQIITQASSLSQ-LPVESFSIDTVLSISSSHELP-----GDQLLEEISRVLKPGGTILI 88 (271)
Q Consensus 16 s~~mv~~ar~~~~~~-~~~~~~~v~~~~~d~e~-lp~~~~sfD~V~s~~~l~~~~-----~~~~L~ei~RvLKPGG~l~i 88 (271)
++.|++.++++.... ......++.++.+|+.+ ++..+++||+|++....++-+ ...++++++|+|||||+|++
T Consensus 149 s~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~ 228 (321)
T 2pt6_A 149 DETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVA 228 (321)
T ss_dssp CHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEEECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEE
T ss_pred CHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEEECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEE
Confidence 678999999875320 01123678999998765 333467899999854322211 27899999999999999999
Q ss_pred EecC
Q 024162 89 YKKL 92 (271)
Q Consensus 89 ~~~~ 92 (271)
....
T Consensus 229 ~~~~ 232 (321)
T 2pt6_A 229 QCES 232 (321)
T ss_dssp EECC
T ss_pred EcCC
Confidence 8644
No 210
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=96.65 E-value=0.0024 Score=55.17 Aligned_cols=54 Identities=13% Similarity=0.121 Sum_probs=42.7
Q ss_pred CCeEEEeccCCCC---CCCC-CceeEEEeccccccCChHHHHHHHHH-hccCCcEEEEEec
Q 024162 36 PQIITQASSLSQL---PVES-FSIDTVLSISSSHELPGDQLLEEISR-VLKPGGTILIYKK 91 (271)
Q Consensus 36 ~~v~~~~~d~e~l---p~~~-~sfD~V~s~~~l~~~~~~~~L~ei~R-vLKPGG~l~i~~~ 91 (271)
.+|.++++++..+ ++.. .+||+|++... | .....+|.+++| +|||||+|++.+.
T Consensus 130 ~~v~~~~gD~~~~~~l~~~~~~~fD~I~~d~~-~-~~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 130 ENITLHQGDCSDLTTFEHLREMAHPLIFIDNA-H-ANTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp TTEEEEECCSSCSGGGGGGSSSCSSEEEEESS-C-SSHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred CceEEEECcchhHHHHHhhccCCCCEEEECCc-h-HhHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 5689999999884 6544 47999997554 3 334789999998 9999999999864
No 211
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=96.63 E-value=0.0024 Score=60.70 Aligned_cols=55 Identities=16% Similarity=0.006 Sum_probs=40.4
Q ss_pred CCeEEEeccCCCC--CC--CCCceeEEEeccccccCCh-HHHHHHHHHhccCCcEEEEEec
Q 024162 36 PQIITQASSLSQL--PV--ESFSIDTVLSISSSHELPG-DQLLEEISRVLKPGGTILIYKK 91 (271)
Q Consensus 36 ~~v~~~~~d~e~l--p~--~~~sfD~V~s~~~l~~~~~-~~~L~ei~RvLKPGG~l~i~~~ 91 (271)
.++.+++++.... ++ ..++||+|+++..+ +.++ ..+|++++|+|||||+|++.+.
T Consensus 301 ~nV~~i~gD~~~~~~~~~~~~~~FDvIvvn~~l-~~~d~~~~L~el~r~LKpGG~lVi~d~ 360 (433)
T 1u2z_A 301 NNVEFSLKKSFVDNNRVAELIPQCDVILVNNFL-FDEDLNKKVEKILQTAKVGCKIISLKS 360 (433)
T ss_dssp CCEEEEESSCSTTCHHHHHHGGGCSEEEECCTT-CCHHHHHHHHHHHTTCCTTCEEEESSC
T ss_pred CceEEEEcCccccccccccccCCCCEEEEeCcc-ccccHHHHHHHHHHhCCCCeEEEEeec
Confidence 4688888754322 22 25789999986555 3344 7889999999999999999864
No 212
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=96.57 E-value=0.0028 Score=57.22 Aligned_cols=56 Identities=13% Similarity=0.061 Sum_probs=42.1
Q ss_pred CCeEEEec-cCCCCCCCCCceeEEEeccccc---cCCh-H---HHHHHHHHhccCCcEEEEEecCC
Q 024162 36 PQIITQAS-SLSQLPVESFSIDTVLSISSSH---ELPG-D---QLLEEISRVLKPGGTILIYKKLT 93 (271)
Q Consensus 36 ~~v~~~~~-d~e~lp~~~~sfD~V~s~~~l~---~~~~-~---~~L~ei~RvLKPGG~l~i~~~~~ 93 (271)
..+.++++ |+..+| ..+||+|++..+.+ +..+ . .+|.+++|+|||||.|++..+..
T Consensus 131 ~~v~~~~~~D~~~l~--~~~fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~~ 194 (305)
T 2p41_A 131 NLVRLQSGVDVFFIP--PERCDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLNP 194 (305)
T ss_dssp GGEEEECSCCTTTSC--CCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESCC
T ss_pred CCeEEEeccccccCC--cCCCCEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 45888888 777665 56899999965543 3323 2 57899999999999999977653
No 213
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=96.53 E-value=0.0065 Score=53.68 Aligned_cols=103 Identities=13% Similarity=0.077 Sum_probs=59.5
Q ss_pred HHHHHHHHHHhCchhh-hcCC------CCeEEEeccCCCC--CC----CCCceeEEEeccccccCCh-HHHHHHHHHhcc
Q 024162 16 VSAVLNAIRDLGDEAV-EQCD------PQIITQASSLSQL--PV----ESFSIDTVLSISSSHELPG-DQLLEEISRVLK 81 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~-~~~~------~~v~~~~~d~e~l--p~----~~~sfD~V~s~~~l~~~~~-~~~L~ei~RvLK 81 (271)
+..|++.+++...... ...+ .++.+...+..+. .+ .+.+||+|++..++++... ..+++++.++|+
T Consensus 112 ~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk 191 (281)
T 3bzb_A 112 DPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQRCTGLQRFQVVLLADLLSFHQAHDALLRSVKMLLA 191 (281)
T ss_dssp CHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHHHHSCSSBSEEEEESCCSCGGGHHHHHHHHHHHBC
T ss_pred CHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHhhccCCCCCEEEEeCcccChHHHHHHHHHHHHHhc
Confidence 3677777776531000 0011 2466664443321 11 4678999999888887766 899999999999
Q ss_pred ---C--CcEEEEEecCCCCcccHHHHHHHHHHHHHHcC-Ccchhh
Q 024162 82 ---P--GGTILIYKKLTSDKGDVDKAISALEGKLLLAG-FLDAQR 120 (271)
Q Consensus 82 ---P--GG~l~i~~~~~~~~~e~~~~~~~l~~~l~laG-F~~v~~ 120 (271)
| ||++++.-..... .+......+...+..+| |.....
T Consensus 192 ~~~p~~gG~l~v~~~~~~~--~~~~~~~~~~~~l~~~G~f~v~~~ 234 (281)
T 3bzb_A 192 LPANDPTAVALVTFTHHRP--HLAERDLAFFRLVNADGALIAEPW 234 (281)
T ss_dssp CTTTCTTCEEEEEECC----------CTHHHHHHHHSTTEEEEEE
T ss_pred ccCCCCCCEEEEEEEeeec--ccchhHHHHHHHHHhcCCEEEEEe
Confidence 9 9998775432110 00011124445677789 876443
No 214
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=96.40 E-value=0.0025 Score=56.61 Aligned_cols=75 Identities=11% Similarity=0.046 Sum_probs=52.4
Q ss_pred HHHHHHHHHHhCchhh-hc-------CCCCeEEEeccCCCC-CCCCCceeEEEeccccccCC-----hHHHHHHHHHhcc
Q 024162 16 VSAVLNAIRDLGDEAV-EQ-------CDPQIITQASSLSQL-PVESFSIDTVLSISSSHELP-----GDQLLEEISRVLK 81 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~-~~-------~~~~v~~~~~d~e~l-p~~~~sfD~V~s~~~l~~~~-----~~~~L~ei~RvLK 81 (271)
++.|++.+|++. ... .. ...++.++.+|+... +. +++||+|++....++.+ ...++++++|+|+
T Consensus 107 d~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~ 184 (281)
T 1mjf_A 107 DEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALN 184 (281)
T ss_dssp CHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEE
T ss_pred CHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcc-cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcC
Confidence 578888888875 110 11 246789999987542 33 67899999865433211 3778999999999
Q ss_pred CCcEEEEEecC
Q 024162 82 PGGTILIYKKL 92 (271)
Q Consensus 82 PGG~l~i~~~~ 92 (271)
|||+|++....
T Consensus 185 pgG~lv~~~~~ 195 (281)
T 1mjf_A 185 NPGIYVTQAGS 195 (281)
T ss_dssp EEEEEEEEEEE
T ss_pred CCcEEEEEcCC
Confidence 99999998543
No 215
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=96.39 E-value=0.014 Score=55.92 Aligned_cols=83 Identities=11% Similarity=0.093 Sum_probs=54.2
Q ss_pred cEEEEecCCcccHHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCC-CCCceeEEEecc------cccc-------CC-
Q 024162 4 AVLALSEDKILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPV-ESFSIDTVLSIS------SSHE-------LP- 68 (271)
Q Consensus 4 ~vl~~td~~~~~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~-~~~sfD~V~s~~------~l~~-------~~- 68 (271)
+.++..|. ++.+++.++++.... ...++.++++|+..++. .+++||+|++.. .+.. +.
T Consensus 143 g~V~avDi----s~~~l~~~~~n~~r~---g~~nv~~~~~D~~~~~~~~~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~ 215 (479)
T 2frx_A 143 GAILANEF----SASRVKVLHANISRC---GISNVALTHFDGRVFGAAVPEMFDAILLDAPCSGEGVVRKDPDALKNWSP 215 (479)
T ss_dssp SEEEEECS----SHHHHHHHHHHHHHH---TCCSEEEECCCSTTHHHHSTTCEEEEEEECCCCCGGGGGTCTTSSSSCCH
T ss_pred CEEEEEEC----CHHHHHHHHHHHHHc---CCCcEEEEeCCHHHhhhhccccCCEEEECCCcCCcccccCCHHHHhhcCH
Confidence 34555555 455666666553211 11368899999988764 567899999721 1111 11
Q ss_pred ---------hHHHHHHHHHhccCCcEEEEEecCC
Q 024162 69 ---------GDQLLEEISRVLKPGGTILIYKKLT 93 (271)
Q Consensus 69 ---------~~~~L~ei~RvLKPGG~l~i~~~~~ 93 (271)
...+|.+++++|||||+|++++...
T Consensus 216 ~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~ 249 (479)
T 2frx_A 216 ESNQEIAATQRELIDSAFHALRPGGTLVYSTCTL 249 (479)
T ss_dssp HHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccC
Confidence 1468999999999999999988654
No 216
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=96.39 E-value=0.0029 Score=52.87 Aligned_cols=57 Identities=16% Similarity=0.177 Sum_probs=41.7
Q ss_pred CCeEEEeccCCCCCCC-----------CCceeEEEeccccccC----Ch--------HHHHHHHHHhccCCcEEEEEecC
Q 024162 36 PQIITQASSLSQLPVE-----------SFSIDTVLSISSSHEL----PG--------DQLLEEISRVLKPGGTILIYKKL 92 (271)
Q Consensus 36 ~~v~~~~~d~e~lp~~-----------~~sfD~V~s~~~l~~~----~~--------~~~L~ei~RvLKPGG~l~i~~~~ 92 (271)
.++.++++|+.+.+.. .++||+|++....... .+ ..++.++.++|||||+|++..+.
T Consensus 62 ~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~ 141 (191)
T 3dou_A 62 AGVRFIRCDIFKETIFDDIDRALREEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQ 141 (191)
T ss_dssp TTCEEEECCTTSSSHHHHHHHHHHHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCeEEEEccccCHHHHHHHHHHhhcccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcC
Confidence 3688999999886521 1499999995432211 11 46788999999999999998875
No 217
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=96.36 E-value=0.0025 Score=58.26 Aligned_cols=99 Identities=10% Similarity=0.031 Sum_probs=59.5
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCC----CCceeEEEecccc----------ccCCh-HHHHHHHHHhc
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVE----SFSIDTVLSISSS----------HELPG-DQLLEEISRVL 80 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~----~~sfD~V~s~~~l----------~~~~~-~~~L~ei~RvL 80 (271)
++.|++.+++..... ...+.++.++++|+.++... ..+||+|++.... ++..+ ..++.++.++|
T Consensus 184 s~~al~~a~~n~~~~-gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~L 262 (332)
T 2igt_A 184 SKKAIGWAKENQVLA-GLEQAPIRWICEDAMKFIQREERRGSTYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREIL 262 (332)
T ss_dssp CHHHHHHHHHHHHHH-TCTTSCEEEECSCHHHHHHHHHHHTCCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTB
T ss_pred CHHHHHHHHHHHHHc-CCCccceEEEECcHHHHHHHHHhcCCCceEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhc
Confidence 577888888764211 01112489999998765321 5689999984321 12223 68999999999
Q ss_pred cCCcEEEEEecCCCCcccHHHHHHHHHHHHHHcCCc
Q 024162 81 KPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFL 116 (271)
Q Consensus 81 KPGG~l~i~~~~~~~~~e~~~~~~~l~~~l~laGF~ 116 (271)
||||.|++........ ........+...+..+|+.
T Consensus 263 kpgG~lli~~~~~~~~-~~~~~~~~l~~a~~~~g~~ 297 (332)
T 2igt_A 263 SPKALGLVLTAYSIRA-SFYSMHELMRETMRGAGGV 297 (332)
T ss_dssp CTTCCEEEEEECCTTS-CHHHHHHHHHHHTTTSCSE
T ss_pred CcCcEEEEEECCCCCC-CHHHHHHHHHHHHHHcCCe
Confidence 9999988776543221 1122122333345566764
No 218
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=96.36 E-value=0.0025 Score=53.61 Aligned_cols=72 Identities=17% Similarity=0.173 Sum_probs=50.5
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCC-C-CCC----CceeEEEeccccccCCh-HHHHHHHHHhccCCcEEEE
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQL-P-VES----FSIDTVLSISSSHELPG-DQLLEEISRVLKPGGTILI 88 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~l-p-~~~----~sfD~V~s~~~l~~~~~-~~~L~ei~RvLKPGG~l~i 88 (271)
++.|++.++++.... ....++.++++++... + +.. ++||+|++... ... ..++.+++++|||||+|++
T Consensus 98 ~~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~v~~~~~---~~~~~~~l~~~~~~L~pgG~lv~ 172 (225)
T 3tr6_A 98 DEKSTALAKEYWEKA--GLSDKIGLRLSPAKDTLAELIHAGQAWQYDLIYIDAD---KANTDLYYEESLKLLREGGLIAV 172 (225)
T ss_dssp CHHHHHHHHHHHHHT--TCTTTEEEEESCHHHHHHHHHTTTCTTCEEEEEECSC---GGGHHHHHHHHHHHEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHC--CCCCceEEEeCCHHHHHHHhhhccCCCCccEEEECCC---HHHHHHHHHHHHHhcCCCcEEEE
Confidence 567888888764211 1223589999988543 2 221 79999996542 223 7899999999999999999
Q ss_pred EecC
Q 024162 89 YKKL 92 (271)
Q Consensus 89 ~~~~ 92 (271)
.+..
T Consensus 173 ~~~~ 176 (225)
T 3tr6_A 173 DNVL 176 (225)
T ss_dssp ECSS
T ss_pred eCCC
Confidence 8754
No 219
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=96.36 E-value=0.0025 Score=54.58 Aligned_cols=72 Identities=14% Similarity=0.098 Sum_probs=50.4
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCC----CCCCC--CceeEEEeccccccCCh-HHHHHHHHHhccCCcEEEE
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQ----LPVES--FSIDTVLSISSSHELPG-DQLLEEISRVLKPGGTILI 88 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~----lp~~~--~sfD~V~s~~~l~~~~~-~~~L~ei~RvLKPGG~l~i 88 (271)
++.+++.+++..... ....++.++.+++.+ ++..+ ++||+|++... ..+ ..++.++.++|||||+|++
T Consensus 106 ~~~~~~~a~~~~~~~--g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~V~~d~~---~~~~~~~l~~~~~~LkpgG~lv~ 180 (232)
T 3cbg_A 106 DPNATAIAKKYWQKA--GVAEKISLRLGPALATLEQLTQGKPLPEFDLIFIDAD---KRNYPRYYEIGLNLLRRGGLMVI 180 (232)
T ss_dssp CHHHHHHHHHHHHHH--TCGGGEEEEESCHHHHHHHHHTSSSCCCEEEEEECSC---GGGHHHHHHHHHHTEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHc--CCCCcEEEEEcCHHHHHHHHHhcCCCCCcCEEEECCC---HHHHHHHHHHHHHHcCCCeEEEE
Confidence 567788887763211 112358888888643 33334 78999998643 223 7899999999999999999
Q ss_pred EecC
Q 024162 89 YKKL 92 (271)
Q Consensus 89 ~~~~ 92 (271)
.+..
T Consensus 181 ~~~~ 184 (232)
T 3cbg_A 181 DNVL 184 (232)
T ss_dssp ECTT
T ss_pred eCCC
Confidence 7654
No 220
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=96.32 E-value=0.0033 Score=55.47 Aligned_cols=71 Identities=13% Similarity=0.156 Sum_probs=51.6
Q ss_pred cHHHHHHHHHHhCchh-hhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCChHHHHHHHHHhccCCcEEEEEecC
Q 024162 15 PVSAVLNAIRDLGDEA-VEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYKKL 92 (271)
Q Consensus 15 ~s~~mv~~ar~~~~~~-~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~~~~L~ei~RvLKPGG~l~i~~~~ 92 (271)
.++.|++.+|++.... ....+.++.++.+|+.... ++||+|++... .+..++++++|+|||||.|++....
T Consensus 102 id~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~---~~fD~Ii~d~~----dp~~~~~~~~~~L~pgG~lv~~~~~ 173 (262)
T 2cmg_A 102 ADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI---KKYDLIFCLQE----PDIHRIDGLKRMLKEDGVFISVAKH 173 (262)
T ss_dssp SCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC---CCEEEEEESSC----CCHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred CCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH---hhCCEEEECCC----ChHHHHHHHHHhcCCCcEEEEEcCC
Confidence 3678888888764220 0123467899999987764 78999998632 2245899999999999999997543
No 221
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=96.31 E-value=0.003 Score=53.16 Aligned_cols=73 Identities=11% Similarity=0.096 Sum_probs=50.2
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCC-C-CC---CCceeEEEeccccccCChHHHHHHHHHhccCCcEEEEEe
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQL-P-VE---SFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYK 90 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~l-p-~~---~~sfD~V~s~~~l~~~~~~~~L~ei~RvLKPGG~l~i~~ 90 (271)
++.|++.++++.... ....++.++++++... + +. .++||+|++..... ....++.+++++|||||.|++.+
T Consensus 92 ~~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~v~~d~~~~--~~~~~l~~~~~~L~pgG~lv~~~ 167 (223)
T 3duw_A 92 SEKHADIARSNIERA--NLNDRVEVRTGLALDSLQQIENEKYEPFDFIFIDADKQ--NNPAYFEWALKLSRPGTVIIGDN 167 (223)
T ss_dssp CHHHHHHHHHHHHHT--TCTTTEEEEESCHHHHHHHHHHTTCCCCSEEEECSCGG--GHHHHHHHHHHTCCTTCEEEEES
T ss_pred CHHHHHHHHHHHHHc--CCCCcEEEEEcCHHHHHHHHHhcCCCCcCEEEEcCCcH--HHHHHHHHHHHhcCCCcEEEEeC
Confidence 577888888764211 1223589999988643 2 21 26799999865421 12789999999999999999876
Q ss_pred cC
Q 024162 91 KL 92 (271)
Q Consensus 91 ~~ 92 (271)
..
T Consensus 168 ~~ 169 (223)
T 3duw_A 168 VV 169 (223)
T ss_dssp CS
T ss_pred CC
Confidence 54
No 222
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=96.25 E-value=0.018 Score=53.08 Aligned_cols=91 Identities=18% Similarity=0.070 Sum_probs=62.0
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccC-------Ch--HHHHHHHHHhccCCcEE
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHEL-------PG--DQLLEEISRVLKPGGTI 86 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~-------~~--~~~L~ei~RvLKPGG~l 86 (271)
++.|++.+++..... ....++.+.++|+.++++++++||+|+++..+... .. ..+++++.|+| ||.+
T Consensus 250 s~~~l~~A~~n~~~~--gl~~~i~~~~~D~~~~~~~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~ 325 (373)
T 3tm4_A 250 YRKHLIGAEMNALAA--GVLDKIKFIQGDATQLSQYVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL--EKRG 325 (373)
T ss_dssp CHHHHHHHHHHHHHT--TCGGGCEEEECCGGGGGGTCSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHE--EEEE
T ss_pred CHHHHHHHHHHHHHc--CCCCceEEEECChhhCCcccCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc--CCeE
Confidence 678888888874221 11136899999999999988999999996543321 12 56888999999 6666
Q ss_pred EEEecCCCCcccHHHHHHHHHHHHHHcCCcchhh
Q 024162 87 LIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQR 120 (271)
Q Consensus 87 ~i~~~~~~~~~e~~~~~~~l~~~l~laGF~~v~~ 120 (271)
++..... ..+.+.+...||.....
T Consensus 326 ~~i~~~~----------~~~~~~~~~~G~~~~~~ 349 (373)
T 3tm4_A 326 VFITTEK----------KAIEEAIAENGFEIIHH 349 (373)
T ss_dssp EEEESCH----------HHHHHHHHHTTEEEEEE
T ss_pred EEEECCH----------HHHHHHHHHcCCEEEEE
Confidence 6655431 14455677789986544
No 223
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=96.16 E-value=0.022 Score=53.08 Aligned_cols=68 Identities=15% Similarity=0.198 Sum_probs=47.3
Q ss_pred HHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccC---Ch-HHHHHHHHHhccCCcEEEEE
Q 024162 19 VLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHEL---PG-DQLLEEISRVLKPGGTILIY 89 (271)
Q Consensus 19 mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~---~~-~~~L~ei~RvLKPGG~l~i~ 89 (271)
|.+.|++.... .....+|.+++++++.+.++ +.||+|++....+.+ .. +.++....|.|||||.++-.
T Consensus 117 ~~~~a~~~~~~--n~~~~~i~~i~~~~~~~~lp-e~~DvivsE~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP~ 188 (376)
T 4hc4_A 117 IWQQAREVVRF--NGLEDRVHVLPGPVETVELP-EQVDAIVSEWMGYGLLHESMLSSVLHARTKWLKEGGLLLPA 188 (376)
T ss_dssp THHHHHHHHHH--TTCTTTEEEEESCTTTCCCS-SCEEEEECCCCBTTBTTTCSHHHHHHHHHHHEEEEEEEESC
T ss_pred HHHHHHHHHHH--cCCCceEEEEeeeeeeecCC-ccccEEEeecccccccccchhhhHHHHHHhhCCCCceECCc
Confidence 45555554211 01235699999999999887 589999994432222 22 78888899999999998743
No 224
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=96.16 E-value=0.0014 Score=56.50 Aligned_cols=72 Identities=10% Similarity=0.070 Sum_probs=43.4
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCC---CCC---CCceeEEEeccccccCC---------------h-HHHH
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQL---PVE---SFSIDTVLSISSSHELP---------------G-DQLL 73 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~l---p~~---~~sfD~V~s~~~l~~~~---------------~-~~~L 73 (271)
++.|++.++++.... ....++.++++|+.+. +++ +++||+|++...+++.. + ..++
T Consensus 98 s~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~ 175 (254)
T 2h00_A 98 DDMCFNYAKKNVEQN--NLSDLIKVVKVPQKTLLMDALKEESEIIYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNT 175 (254)
T ss_dssp CHHHHHHHHHHHHHT--TCTTTEEEEECCTTCSSTTTSTTCCSCCBSEEEECCCCC------------------------
T ss_pred CHHHHHHHHHHHHHc--CCCccEEEEEcchhhhhhhhhhcccCCcccEEEECCCCccCcchhcccccccccccCCHHHHh
Confidence 578888888774211 1123489999998762 455 36899999975444322 1 2456
Q ss_pred HHHHHhccCCcEEEEE
Q 024162 74 EEISRVLKPGGTILIY 89 (271)
Q Consensus 74 ~ei~RvLKPGG~l~i~ 89 (271)
.+++|+|||||.+.+.
T Consensus 176 ~~~~~~LkpgG~l~~~ 191 (254)
T 2h00_A 176 GGITEIMAEGGELEFV 191 (254)
T ss_dssp -CTTTTHHHHTHHHHH
T ss_pred hhHHHHEecCCEEEEE
Confidence 7788888888877554
No 225
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=96.12 E-value=0.013 Score=48.29 Aligned_cols=61 Identities=7% Similarity=-0.051 Sum_probs=44.7
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCCh---HHHHHHHHHhccCCcEEEEE
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPG---DQLLEEISRVLKPGGTILIY 89 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~---~~~L~ei~RvLKPGG~l~i~ 89 (271)
++.|++.++++.. ++.++++++..+| ++||+|++...+|++.. ..+++++.++| |+.+++.
T Consensus 83 ~~~~~~~a~~~~~--------~~~~~~~d~~~~~---~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~~--g~~~~~~ 146 (200)
T 1ne2_A 83 DPDAIETAKRNCG--------GVNFMVADVSEIS---GKYDTWIMNPPFGSVVKHSDRAFIDKAFETS--MWIYSIG 146 (200)
T ss_dssp CHHHHHHHHHHCT--------TSEEEECCGGGCC---CCEEEEEECCCC-------CHHHHHHHHHHE--EEEEEEE
T ss_pred CHHHHHHHHHhcC--------CCEEEECcHHHCC---CCeeEEEECCCchhccCchhHHHHHHHHHhc--CcEEEEE
Confidence 6788888888751 5788999998875 68999999988888764 67999999999 5544443
No 226
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=96.07 E-value=0.0016 Score=63.63 Aligned_cols=75 Identities=15% Similarity=0.125 Sum_probs=58.9
Q ss_pred cHHHHHHHHHHhCchhhhcCCCCeEEEeccCCCC--CCCCCceeEEEeccccccCChH---HHHHHHHHhccCCcEEEEE
Q 024162 15 PVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQL--PVESFSIDTVLSISSSHELPGD---QLLEEISRVLKPGGTILIY 89 (271)
Q Consensus 15 ~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~l--p~~~~sfD~V~s~~~l~~~~~~---~~L~ei~RvLKPGG~l~i~ 89 (271)
.++.+++.||.++.. ....+|.|.+++++++ ++.+++||+|+++.+++|+++. ..+..+++.|.++|..++.
T Consensus 96 ~~~~~i~~a~~~a~~---~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e~~ehv~~~~~~~~~~~~~~tl~~~~~~~~~ 172 (569)
T 4azs_A 96 FQQENINVCRALAEE---NPDFAAEFRVGRIEEVIAALEEGEFDLAIGLSVFHHIVHLHGIDEVKRLLSRLADVTQAVIL 172 (569)
T ss_dssp SCHHHHHHHHHHHHT---STTSEEEEEECCHHHHHHHCCTTSCSEEEEESCHHHHHHHHCHHHHHHHHHHHHHHSSEEEE
T ss_pred CCHHHHHHHHHHHHh---cCCCceEEEECCHHHHhhhccCCCccEEEECcchhcCCCHHHHHHHHHHHHHhccccceeeE
Confidence 478899999987521 2235799999999988 5778899999999999999863 3455688889999988877
Q ss_pred ecC
Q 024162 90 KKL 92 (271)
Q Consensus 90 ~~~ 92 (271)
...
T Consensus 173 ~~~ 175 (569)
T 4azs_A 173 ELA 175 (569)
T ss_dssp ECC
T ss_pred Eec
Confidence 643
No 227
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=96.00 E-value=0.0055 Score=52.35 Aligned_cols=71 Identities=21% Similarity=0.207 Sum_probs=49.2
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCC-CC--------------CCC--CceeEEEeccccccCCh-HHHHHHHH
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQ-LP--------------VES--FSIDTVLSISSSHELPG-DQLLEEIS 77 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~-lp--------------~~~--~sfD~V~s~~~l~~~~~-~~~L~ei~ 77 (271)
++.+++.++++.... ....++.++.+++.. ++ |++ ++||+|++... ... ..++.++.
T Consensus 94 ~~~~~~~a~~~~~~~--g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~f~~~~~~fD~I~~~~~---~~~~~~~l~~~~ 168 (239)
T 2hnk_A 94 SEEWTNVARKYWKEN--GLENKIFLKLGSALETLQVLIDSKSAPSWASDFAFGPSSIDLFFLDAD---KENYPNYYPLIL 168 (239)
T ss_dssp CHHHHHHHHHHHHHT--TCGGGEEEEESCHHHHHHHHHHCSSCCGGGTTTCCSTTCEEEEEECSC---GGGHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHc--CCCCCEEEEECCHHHHHHHHHhhcccccccccccCCCCCcCEEEEeCC---HHHHHHHHHHHH
Confidence 567777777763211 111248888888754 22 233 78999998643 223 68899999
Q ss_pred HhccCCcEEEEEec
Q 024162 78 RVLKPGGTILIYKK 91 (271)
Q Consensus 78 RvLKPGG~l~i~~~ 91 (271)
++|||||+|++.+.
T Consensus 169 ~~L~pgG~lv~~~~ 182 (239)
T 2hnk_A 169 KLLKPGGLLIADNV 182 (239)
T ss_dssp HHEEEEEEEEEECS
T ss_pred HHcCCCeEEEEEcc
Confidence 99999999999874
No 228
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=95.96 E-value=0.0078 Score=52.24 Aligned_cols=71 Identities=13% Similarity=0.023 Sum_probs=50.2
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCC-C-C-----CCCceeEEEeccccccCCh-HHHHHHHHHhccCCcEEE
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQL-P-V-----ESFSIDTVLSISSSHELPG-DQLLEEISRVLKPGGTIL 87 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~l-p-~-----~~~sfD~V~s~~~l~~~~~-~~~L~ei~RvLKPGG~l~ 87 (271)
++.|++.++++.... ....+|.++.+++... + + ++++||+|++... ... ..++.+++++|||||+|+
T Consensus 113 s~~~~~~a~~~~~~~--g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv 187 (247)
T 1sui_A 113 NKENYELGLPVIKKA--GVDHKIDFREGPALPVLDEMIKDEKNHGSYDFIFVDAD---KDNYLNYHKRLIDLVKVGGVIG 187 (247)
T ss_dssp CCHHHHHHHHHHHHT--TCGGGEEEEESCHHHHHHHHHHSGGGTTCBSEEEECSC---STTHHHHHHHHHHHBCTTCCEE
T ss_pred CHHHHHHHHHHHHHc--CCCCCeEEEECCHHHHHHHHHhccCCCCCEEEEEEcCc---hHHHHHHHHHHHHhCCCCeEEE
Confidence 457777787764211 1124688999988653 3 2 2678999998643 223 789999999999999999
Q ss_pred EEec
Q 024162 88 IYKK 91 (271)
Q Consensus 88 i~~~ 91 (271)
+.+.
T Consensus 188 ~d~~ 191 (247)
T 1sui_A 188 YDNT 191 (247)
T ss_dssp EECT
T ss_pred EecC
Confidence 8764
No 229
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=95.82 E-value=0.0094 Score=50.15 Aligned_cols=72 Identities=15% Similarity=0.178 Sum_probs=48.7
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCC--CCCC----CceeEEEeccccccCCh-HHHHHHHHHhccCCcEEEE
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQL--PVES----FSIDTVLSISSSHELPG-DQLLEEISRVLKPGGTILI 88 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~l--p~~~----~sfD~V~s~~~l~~~~~-~~~L~ei~RvLKPGG~l~i 88 (271)
++.|++.+++..... ....++.++++++.+. .+.. ++||+|++... ... ..++.++.++|+|||.+++
T Consensus 103 ~~~~~~~a~~~~~~~--g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D~v~~d~~---~~~~~~~l~~~~~~L~pgG~lv~ 177 (229)
T 2avd_A 103 DAQPPELGRPLWRQA--EAEHKIDLRLKPALETLDELLAAGEAGTFDVAVVDAD---KENCSAYYERCLQLLRPGGILAV 177 (229)
T ss_dssp CSHHHHHHHHHHHHT--TCTTTEEEEESCHHHHHHHHHHTTCTTCEEEEEECSC---STTHHHHHHHHHHHEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHC--CCCCeEEEEEcCHHHHHHHHHhcCCCCCccEEEECCC---HHHHHHHHHHHHHHcCCCeEEEE
Confidence 456677777653211 1124688998887543 1221 68999998543 222 7899999999999999999
Q ss_pred EecC
Q 024162 89 YKKL 92 (271)
Q Consensus 89 ~~~~ 92 (271)
.+..
T Consensus 178 ~~~~ 181 (229)
T 2avd_A 178 LRVL 181 (229)
T ss_dssp ECCS
T ss_pred ECCC
Confidence 7643
No 230
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=95.79 E-value=0.0053 Score=52.83 Aligned_cols=71 Identities=14% Similarity=0.047 Sum_probs=50.0
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCC-C-C-----CCCceeEEEeccccccCCh-HHHHHHHHHhccCCcEEE
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQL-P-V-----ESFSIDTVLSISSSHELPG-DQLLEEISRVLKPGGTIL 87 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~l-p-~-----~~~sfD~V~s~~~l~~~~~-~~~L~ei~RvLKPGG~l~ 87 (271)
++.+++.+++..... ....++.++++++.++ + + +.++||+|++... ... ..++.++.++|||||.++
T Consensus 104 ~~~~~~~a~~~~~~~--g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~I~~d~~---~~~~~~~l~~~~~~L~pGG~lv 178 (237)
T 3c3y_A 104 DREAYEIGLPFIRKA--GVEHKINFIESDAMLALDNLLQGQESEGSYDFGFVDAD---KPNYIKYHERLMKLVKVGGIVA 178 (237)
T ss_dssp CHHHHHHHHHHHHHT--TCGGGEEEEESCHHHHHHHHHHSTTCTTCEEEEEECSC---GGGHHHHHHHHHHHEEEEEEEE
T ss_pred CHHHHHHHHHHHHHc--CCCCcEEEEEcCHHHHHHHHHhccCCCCCcCEEEECCc---hHHHHHHHHHHHHhcCCCeEEE
Confidence 567788888764211 1123588998987643 3 2 2578999998532 223 789999999999999999
Q ss_pred EEec
Q 024162 88 IYKK 91 (271)
Q Consensus 88 i~~~ 91 (271)
+.+.
T Consensus 179 ~d~~ 182 (237)
T 3c3y_A 179 YDNT 182 (237)
T ss_dssp EECT
T ss_pred EecC
Confidence 8764
No 231
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=95.73 E-value=0.019 Score=54.93 Aligned_cols=82 Identities=17% Similarity=0.127 Sum_probs=52.7
Q ss_pred cEEEEecCCcccHHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCC-CCCCceeEEEecc------ccc--------cCC
Q 024162 4 AVLALSEDKILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLP-VESFSIDTVLSIS------SSH--------ELP 68 (271)
Q Consensus 4 ~vl~~td~~~~~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp-~~~~sfD~V~s~~------~l~--------~~~ 68 (271)
+.++..|. ++.|++.+++..... . ..+.++++|+..++ +.+++||+|++.. .+. +-+
T Consensus 127 g~V~AvDi----s~~~l~~a~~n~~r~---G-~~v~~~~~Da~~l~~~~~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~ 198 (464)
T 3m6w_A 127 GLLLANEV----DGKRVRGLLENVERW---G-APLAVTQAPPRALAEAFGTYFHRVLLDAPCSGEGMFRKDREAARHWGP 198 (464)
T ss_dssp SEEEEECS----CHHHHHHHHHHHHHH---C-CCCEEECSCHHHHHHHHCSCEEEEEEECCCCCGGGTTTCTTSGGGCCT
T ss_pred CEEEEEEC----CHHHHHHHHHHHHHc---C-CeEEEEECCHHHhhhhccccCCEEEECCCcCCccccccChHHhhhcCH
Confidence 34555554 455666666653211 1 22788889988776 3567999999621 111 101
Q ss_pred ---------hHHHHHHHHHhccCCcEEEEEecCC
Q 024162 69 ---------GDQLLEEISRVLKPGGTILIYKKLT 93 (271)
Q Consensus 69 ---------~~~~L~ei~RvLKPGG~l~i~~~~~ 93 (271)
...+|.+++++|||||+|++++-.-
T Consensus 199 ~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~ 232 (464)
T 3m6w_A 199 SAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTF 232 (464)
T ss_dssp THHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccC
Confidence 0568999999999999999987653
No 232
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=95.64 E-value=0.013 Score=55.97 Aligned_cols=83 Identities=12% Similarity=0.051 Sum_probs=52.5
Q ss_pred cEEEEecCCcccHHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCC-CCCCceeEEEeccc---cccC-----------C
Q 024162 4 AVLALSEDKILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLP-VESFSIDTVLSISS---SHEL-----------P 68 (271)
Q Consensus 4 ~vl~~td~~~~~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp-~~~~sfD~V~s~~~---l~~~-----------~ 68 (271)
+.++..|.+ +.+++.+++..... ...++.++.+|+..++ +.+++||+|++... ...+ .
T Consensus 131 g~V~AvDis----~~rl~~~~~n~~r~---g~~nv~v~~~Da~~l~~~~~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~ 203 (456)
T 3m4x_A 131 GLLVTNEIF----PKRAKILSENIERW---GVSNAIVTNHAPAELVPHFSGFFDRIVVDAPCSGEGMFRKDPNAIKEWTE 203 (456)
T ss_dssp SEEEEECSS----HHHHHHHHHHHHHH---TCSSEEEECCCHHHHHHHHTTCEEEEEEECCCCCGGGTTTCHHHHHHCCT
T ss_pred CEEEEEeCC----HHHHHHHHHHHHHc---CCCceEEEeCCHHHhhhhccccCCEEEECCCCCCccccccCHHHhhhcCH
Confidence 345556654 44555555543111 1135888888887765 34679999997321 1111 0
Q ss_pred -------h--HHHHHHHHHhccCCcEEEEEecCC
Q 024162 69 -------G--DQLLEEISRVLKPGGTILIYKKLT 93 (271)
Q Consensus 69 -------~--~~~L~ei~RvLKPGG~l~i~~~~~ 93 (271)
. ..+|.+++++|||||+|++++-.-
T Consensus 204 ~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~ 237 (456)
T 3m4x_A 204 ESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTF 237 (456)
T ss_dssp THHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCC
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeec
Confidence 0 278999999999999999988653
No 233
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=95.57 E-value=0.026 Score=50.08 Aligned_cols=72 Identities=14% Similarity=0.156 Sum_probs=48.7
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCce---eEEEeccccc-----------cCCh---------HHH
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSI---DTVLSISSSH-----------ELPG---------DQL 72 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sf---D~V~s~~~l~-----------~~~~---------~~~ 72 (271)
++.+++.+++..... ....++.++++|+.. +++ ++| |+|+++-... |.+. ..+
T Consensus 155 s~~al~~A~~n~~~~--~l~~~v~~~~~D~~~-~~~-~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~ 230 (284)
T 1nv8_A 155 SSKAVEIARKNAERH--GVSDRFFVRKGEFLE-PFK-EKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDF 230 (284)
T ss_dssp CHHHHHHHHHHHHHT--TCTTSEEEEESSTTG-GGG-GGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHH
T ss_pred CHHHHHHHHHHHHHc--CCCCceEEEECcchh-hcc-cccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHH
Confidence 577888888764211 111248999999976 233 479 9999963211 2221 278
Q ss_pred HHHHH-HhccCCcEEEEEec
Q 024162 73 LEEIS-RVLKPGGTILIYKK 91 (271)
Q Consensus 73 L~ei~-RvLKPGG~l~i~~~ 91 (271)
++++. +.|+|||+|++...
T Consensus 231 ~~~i~~~~l~pgG~l~~e~~ 250 (284)
T 1nv8_A 231 YREFFGRYDTSGKIVLMEIG 250 (284)
T ss_dssp HHHHHHHCCCTTCEEEEECC
T ss_pred HHHHHHhcCCCCCEEEEEEC
Confidence 99999 99999999998643
No 234
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=95.56 E-value=0.023 Score=52.46 Aligned_cols=75 Identities=12% Similarity=0.045 Sum_probs=51.0
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCC----CCCceeEEEecccccc---------CCh-HHHHHHHHHhcc
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPV----ESFSIDTVLSISSSHE---------LPG-DQLLEEISRVLK 81 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~----~~~sfD~V~s~~~l~~---------~~~-~~~L~ei~RvLK 81 (271)
++.+++.+++..... ...++.++++|+..+.. ...+||+|++...... ... ..++.++.++|+
T Consensus 240 s~~~~~~a~~n~~~n---~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~Lk 316 (382)
T 1wxx_A 240 SAEALRRAEENARLN---GLGNVRVLEANAFDLLRRLEKEGERFDLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLK 316 (382)
T ss_dssp CHHHHHHHHHHHHHT---TCTTEEEEESCHHHHHHHHHHTTCCEEEEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEE
T ss_pred CHHHHHHHHHHHHHc---CCCCceEEECCHHHHHHHHHhcCCCeeEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcC
Confidence 567777777763211 11238899999876532 2578999998432211 122 678899999999
Q ss_pred CCcEEEEEecCC
Q 024162 82 PGGTILIYKKLT 93 (271)
Q Consensus 82 PGG~l~i~~~~~ 93 (271)
|||.|+++....
T Consensus 317 pgG~l~~~~~~~ 328 (382)
T 1wxx_A 317 EGGILATASCSH 328 (382)
T ss_dssp EEEEEEEEECCT
T ss_pred CCCEEEEEECCC
Confidence 999999998764
No 235
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=95.55 E-value=0.0072 Score=53.31 Aligned_cols=72 Identities=17% Similarity=0.251 Sum_probs=50.0
Q ss_pred CCeEEEeccCCC-CCCCCC----ceeEEEe-ccccccCC---hHHHHHHHHHhccCCcEEEEEecCCCCcccHHHHHHHH
Q 024162 36 PQIITQASSLSQ-LPVESF----SIDTVLS-ISSSHELP---GDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISAL 106 (271)
Q Consensus 36 ~~v~~~~~d~e~-lp~~~~----sfD~V~s-~~~l~~~~---~~~~L~ei~RvLKPGG~l~i~~~~~~~~~e~~~~~~~l 106 (271)
.++..+.+|+.+ ++.-+. .||+|+. .++....+ ...+|.+++|+|||||+|+..... ..+
T Consensus 150 ~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~tysaa-----------~~v 218 (257)
T 2qy6_A 150 VTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFTSA-----------GFV 218 (257)
T ss_dssp EEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEESCCB-----------HHH
T ss_pred eEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEEEeCC-----------HHH
Confidence 457788899865 453322 7999997 33222122 378999999999999999854422 146
Q ss_pred HHHHHHcCCcch
Q 024162 107 EGKLLLAGFLDA 118 (271)
Q Consensus 107 ~~~l~laGF~~v 118 (271)
++.|..+||...
T Consensus 219 rr~L~~aGF~v~ 230 (257)
T 2qy6_A 219 RRGLQEAGFTMQ 230 (257)
T ss_dssp HHHHHHHTEEEE
T ss_pred HHHHHHCCCEEE
Confidence 677888999854
No 236
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=95.48 E-value=0.044 Score=47.57 Aligned_cols=94 Identities=14% Similarity=-0.022 Sum_probs=62.4
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCChHHHHHHHHHhccCCcEEEEEecCCCC
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYKKLTSD 95 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~~~~L~ei~RvLKPGG~l~i~~~~~~~ 95 (271)
++.+++.|++..... ....+|.+.++|+.+...+.+.||+|+.....-. .-..+|.+..+.|+++|+|+++...
T Consensus 54 ~~~al~~A~~N~~~~--gl~~~I~~~~gD~l~~~~~~~~~D~IviaGmGg~-lI~~IL~~~~~~l~~~~~lIlqp~~--- 127 (230)
T 3lec_A 54 VNGPYQSALKNVSEH--GLTSKIDVRLANGLSAFEEADNIDTITICGMGGR-LIADILNNDIDKLQHVKTLVLQPNN--- 127 (230)
T ss_dssp SHHHHHHHHHHHHHT--TCTTTEEEEECSGGGGCCGGGCCCEEEEEEECHH-HHHHHHHHTGGGGTTCCEEEEEESS---
T ss_pred CHHHHHHHHHHHHHc--CCCCcEEEEECchhhccccccccCEEEEeCCchH-HHHHHHHHHHHHhCcCCEEEEECCC---
Confidence 345555555542110 1124699999998877665557999876332110 0156788889999999999999854
Q ss_pred cccHHHHHHHHHHHHHHcCCcchhhh
Q 024162 96 KGDVDKAISALEGKLLLAGFLDAQRI 121 (271)
Q Consensus 96 ~~e~~~~~~~l~~~l~laGF~~v~~~ 121 (271)
. ...+++.|..+||.-++..
T Consensus 128 --~----~~~lr~~L~~~Gf~i~~E~ 147 (230)
T 3lec_A 128 --R----EDDLRKWLAANDFEIVAED 147 (230)
T ss_dssp --C----HHHHHHHHHHTTEEEEEEE
T ss_pred --C----hHHHHHHHHHCCCEEEEEE
Confidence 1 1267788999999876654
No 237
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=95.43 E-value=0.14 Score=42.02 Aligned_cols=86 Identities=9% Similarity=-0.006 Sum_probs=57.8
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCCh---HHHHHHHHHhccCCcEEEEEecC
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPG---DQLLEEISRVLKPGGTILIYKKL 92 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~---~~~L~ei~RvLKPGG~l~i~~~~ 92 (271)
++.|++.++++.... +.++.++++|+.+++ .+||+|++...+++... ..+++++.++| ||.++ ....
T Consensus 81 ~~~~~~~a~~~~~~~----~~~~~~~~~d~~~~~---~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~l--~~~~~-~~~~ 150 (207)
T 1wy7_A 81 DKEAVDVLIENLGEF----KGKFKVFIGDVSEFN---SRVDIVIMNPPFGSQRKHADRPFLLKAFEIS--DVVYS-IHLA 150 (207)
T ss_dssp CHHHHHHHHHHTGGG----TTSEEEEESCGGGCC---CCCSEEEECCCCSSSSTTTTHHHHHHHHHHC--SEEEE-EEEC
T ss_pred CHHHHHHHHHHHHHc----CCCEEEEECchHHcC---CCCCEEEEcCCCccccCCchHHHHHHHHHhc--CcEEE-EEeC
Confidence 678888888875321 137899999998875 48999999887776642 78899999999 55444 4321
Q ss_pred CCCcccHHHHHHHHHHHHHHcCCcc
Q 024162 93 TSDKGDVDKAISALEGKLLLAGFLD 117 (271)
Q Consensus 93 ~~~~~e~~~~~~~l~~~l~laGF~~ 117 (271)
. ......+...+...||..
T Consensus 151 ~------~~~~~~~~~~l~~~g~~~ 169 (207)
T 1wy7_A 151 K------PEVRRFIEKFSWEHGFVV 169 (207)
T ss_dssp C------HHHHHHHHHHHHHTTEEE
T ss_pred C------cCCHHHHHHHHHHCCCeE
Confidence 1 111224455667788754
No 238
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=95.41 E-value=0.044 Score=49.63 Aligned_cols=94 Identities=14% Similarity=0.090 Sum_probs=59.7
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCCh-------------------HHHHHHH
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPG-------------------DQLLEEI 76 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~-------------------~~~L~ei 76 (271)
++.++++++..... .+..+.+.++|... +.....||+|+++..+++++. ..++.++
T Consensus 168 ~~~~~~~a~~n~~~----~g~~~~i~~~D~l~-~~~~~~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~ 242 (344)
T 2f8l_A 168 DDLLISLALVGADL----QRQKMTLLHQDGLA-NLLVDPVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQG 242 (344)
T ss_dssp CHHHHHHHHHHHHH----HTCCCEEEESCTTS-CCCCCCEEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHH
T ss_pred CHHHHHHHHHHHHh----CCCCceEEECCCCC-ccccCCccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHH
Confidence 45666666665311 11256778888755 344678999999876554432 2589999
Q ss_pred HHhccCCcEEEEEecCCCCcccHHHHHHHHHHHHHHcCCcc
Q 024162 77 SRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLD 117 (271)
Q Consensus 77 ~RvLKPGG~l~i~~~~~~~~~e~~~~~~~l~~~l~laGF~~ 117 (271)
.+.|||||++++..+.. .... ...+.+++.+...|++.
T Consensus 243 ~~~Lk~gG~~~~v~p~~-~~~~--~~~~~ir~~l~~~~~~~ 280 (344)
T 2f8l_A 243 MRYTKPGGYLFFLVPDA-MFGT--SDFAKVDKFIKKNGHIE 280 (344)
T ss_dssp HHTEEEEEEEEEEEEGG-GGGS--TTHHHHHHHHHHHEEEE
T ss_pred HHHhCCCCEEEEEECch-hcCC--chHHHHHHHHHhCCeEE
Confidence 99999999999988542 1110 01135666677777754
No 239
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=95.34 E-value=0.07 Score=48.02 Aligned_cols=77 Identities=19% Similarity=0.220 Sum_probs=54.5
Q ss_pred HHHHHHHHHHhCch--hhhcCCCCeEEEeccCCCC-CCCCCceeEEEeccc-----cccCChHHHHHHHHHhccCCcEEE
Q 024162 16 VSAVLNAIRDLGDE--AVEQCDPQIITQASSLSQL-PVESFSIDTVLSISS-----SHELPGDQLLEEISRVLKPGGTIL 87 (271)
Q Consensus 16 s~~mv~~ar~~~~~--~~~~~~~~v~~~~~d~e~l-p~~~~sfD~V~s~~~-----l~~~~~~~~L~ei~RvLKPGG~l~ 87 (271)
.+.+++++|+.... .....++++..+.+|+... .-..++||+|+.=.. ...+-..++++.+.|+|+|||.++
T Consensus 116 D~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvIi~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v 195 (294)
T 3o4f_A 116 DAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFV 195 (294)
T ss_dssp CHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEEEESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEE
T ss_pred CHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEEEEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEE
Confidence 46788888886421 1123457888888988643 455778999997321 122334789999999999999999
Q ss_pred EEecC
Q 024162 88 IYKKL 92 (271)
Q Consensus 88 i~~~~ 92 (271)
.+...
T Consensus 196 ~q~~s 200 (294)
T 3o4f_A 196 AQNGV 200 (294)
T ss_dssp EEEEE
T ss_pred EecCC
Confidence 88654
No 240
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=95.30 E-value=0.011 Score=52.37 Aligned_cols=69 Identities=13% Similarity=0.136 Sum_probs=47.2
Q ss_pred cHHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCCh--HHHH--------------HHHH-
Q 024162 15 PVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPG--DQLL--------------EEIS- 77 (271)
Q Consensus 15 ~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~--~~~L--------------~ei~- 77 (271)
.++.|++.++++.... ....++.++++|+.+++++ +||+|+++..+++..+ ..++ +|++
T Consensus 58 ~~~~~~~~a~~~~~~~--~~~~~v~~~~~D~~~~~~~--~fD~vv~nlpy~~~~~~~~~~l~~~~~~~~~~~m~qkEva~ 133 (285)
T 1zq9_A 58 LDPRLVAELHKRVQGT--PVASKLQVLVGDVLKTDLP--FFDTCVANLPYQISSPFVFKLLLHRPFFRCAILMFQREFAL 133 (285)
T ss_dssp SCHHHHHHHHHHHTTS--TTGGGEEEEESCTTTSCCC--CCSEEEEECCGGGHHHHHHHHHHCSSCCSEEEEEEEHHHHH
T ss_pred CCHHHHHHHHHHHHhc--CCCCceEEEEcceecccch--hhcEEEEecCcccchHHHHHHHhcCcchhhhhhhhhHHHHH
Confidence 3678888888864211 0114689999999988776 7999999776665543 2333 3443
Q ss_pred -HhccCCcEEE
Q 024162 78 -RVLKPGGTIL 87 (271)
Q Consensus 78 -RvLKPGG~l~ 87 (271)
++|||||.++
T Consensus 134 r~vlkPGg~~y 144 (285)
T 1zq9_A 134 RLVAKPGDKLY 144 (285)
T ss_dssp HHHCCTTCTTC
T ss_pred HHhcCCCCccc
Confidence 7999999874
No 241
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=95.22 E-value=0.048 Score=50.45 Aligned_cols=76 Identities=12% Similarity=0.088 Sum_probs=51.5
Q ss_pred HHHHHHHHHHhCchhhhcC-CCCeEEEeccCCCCCC----CCCceeEEEecccc---------ccCCh-HHHHHHHHHhc
Q 024162 16 VSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQLPV----ESFSIDTVLSISSS---------HELPG-DQLLEEISRVL 80 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~-~~~v~~~~~d~e~lp~----~~~sfD~V~s~~~l---------~~~~~-~~~L~ei~RvL 80 (271)
++.+++.+++..... .. ..++.++++|+.++.. ....||+|++.... ..... ..++.++.++|
T Consensus 252 s~~al~~a~~n~~~n--gl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~L 329 (396)
T 3c0k_A 252 SQEALDIARQNVELN--KLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLL 329 (396)
T ss_dssp CHHHHHHHHHHHHHT--TCCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTE
T ss_pred CHHHHHHHHHHHHHc--CCCccceEEEECCHHHHHHHHHhcCCCCCEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhc
Confidence 567777777653211 01 1168999999876521 14689999985321 11233 78899999999
Q ss_pred cCCcEEEEEecCC
Q 024162 81 KPGGTILIYKKLT 93 (271)
Q Consensus 81 KPGG~l~i~~~~~ 93 (271)
+|||.|+++....
T Consensus 330 kpgG~l~~~~~~~ 342 (396)
T 3c0k_A 330 NEGGILLTFSCSG 342 (396)
T ss_dssp EEEEEEEEEECCT
T ss_pred CCCcEEEEEeCCC
Confidence 9999999988654
No 242
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=95.10 E-value=0.013 Score=58.82 Aligned_cols=92 Identities=14% Similarity=0.077 Sum_probs=59.8
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCC-CCCCCCceeEEEecccc-----------ccCCh-HHHHHHHHHhccC
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQ-LPVESFSIDTVLSISSS-----------HELPG-DQLLEEISRVLKP 82 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~-lp~~~~sfD~V~s~~~l-----------~~~~~-~~~L~ei~RvLKP 82 (271)
++.|++.+++..... .....++.++++|+.+ ++...++||+|++.... ....+ ..++.++.++|+|
T Consensus 571 s~~al~~a~~N~~~n-gl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~Lkp 649 (703)
T 3v97_A 571 SRTYLEWAERNLRLN-GLTGRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRA 649 (703)
T ss_dssp CHHHHHHHHHHHHHT-TCCSTTEEEEESCHHHHHHHCCCCEEEEEECCCSBC-------CCBHHHHHHHHHHHHHHHEEE
T ss_pred CHHHHHHHHHHHHHc-CCCccceEEEecCHHHHHHhcCCCccEEEECCccccCCccchhHHHHHHHHHHHHHHHHHhcCC
Confidence 567778887763211 0111368999999876 45556899999984321 11223 6789999999999
Q ss_pred CcEEEEEecCCCCcccHHHHHHHHHHHHHHcCCc
Q 024162 83 GGTILIYKKLTSDKGDVDKAISALEGKLLLAGFL 116 (271)
Q Consensus 83 GG~l~i~~~~~~~~~e~~~~~~~l~~~l~laGF~ 116 (271)
||+|+++........+ ...+...||.
T Consensus 650 gG~L~~s~~~~~~~~~--------~~~l~~~g~~ 675 (703)
T 3v97_A 650 GGTIMFSNNKRGFRMD--------LDGLAKLGLK 675 (703)
T ss_dssp EEEEEEEECCTTCCCC--------HHHHHHTTEE
T ss_pred CcEEEEEECCcccccC--------HHHHHHcCCc
Confidence 9999988866332222 1235567776
No 243
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=95.10 E-value=0.042 Score=50.78 Aligned_cols=76 Identities=9% Similarity=0.014 Sum_probs=51.1
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCC----CCCceeEEEecccccc---------CCh-HHHHHHHHHhcc
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPV----ESFSIDTVLSISSSHE---------LPG-DQLLEEISRVLK 81 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~----~~~sfD~V~s~~~l~~---------~~~-~~~L~ei~RvLK 81 (271)
++.+++.+++..... ....++.++++|+.++.. ...+||+|++...... ... ..++.++.++|+
T Consensus 249 s~~~l~~a~~n~~~n--~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~Lk 326 (396)
T 2as0_A 249 SPRAIETAKENAKLN--GVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVK 326 (396)
T ss_dssp CHHHHHHHHHHHHHT--TCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEE
T ss_pred CHHHHHHHHHHHHHc--CCCccceEEECCHHHHHHHHHhhCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcC
Confidence 566777777653211 011168999999876532 2578999998432211 122 678899999999
Q ss_pred CCcEEEEEecCC
Q 024162 82 PGGTILIYKKLT 93 (271)
Q Consensus 82 PGG~l~i~~~~~ 93 (271)
|||.|++.....
T Consensus 327 pgG~lv~~~~~~ 338 (396)
T 2as0_A 327 DGGILVTCSCSQ 338 (396)
T ss_dssp EEEEEEEEECCT
T ss_pred CCcEEEEEECCC
Confidence 999999988764
No 244
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=95.03 E-value=0.036 Score=48.81 Aligned_cols=70 Identities=11% Similarity=0.014 Sum_probs=54.5
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCCh--HHHHHHHHHhccCCcEEEEEe
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPG--DQLLEEISRVLKPGGTILIYK 90 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~--~~~L~ei~RvLKPGG~l~i~~ 90 (271)
++.|++.+++.... .+.+..+.+.|....+++. +||+|+++-++|++.+ ...+-+++..|+++|.++-..
T Consensus 135 d~~~i~~ar~~~~~----~g~~~~~~v~D~~~~~~~~-~~DvvLllk~lh~LE~q~~~~~~~ll~aL~~~~vvVsfP 206 (253)
T 3frh_A 135 HQGLGDVITPFARE----KDWDFTFALQDVLCAPPAE-AGDLALIFKLLPLLEREQAGSAMALLQSLNTPRMAVSFP 206 (253)
T ss_dssp BHHHHHHHHHHHHH----TTCEEEEEECCTTTSCCCC-BCSEEEEESCHHHHHHHSTTHHHHHHHHCBCSEEEEEEE
T ss_pred CHHHHHHHHHHHHh----cCCCceEEEeecccCCCCC-CcchHHHHHHHHHhhhhchhhHHHHHHHhcCCCEEEEcC
Confidence 57788888887422 2367888999998887665 8999999988888865 334448999999998888776
No 245
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=94.95 E-value=0.043 Score=50.83 Aligned_cols=97 Identities=10% Similarity=0.041 Sum_probs=56.7
Q ss_pred HHHHHHHHHHhCchhhhcCCC-CeEEEeccCCC-CCC---CCCceeEEEecccc-----ccCCh-----HHHHHHHHHhc
Q 024162 16 VSAVLNAIRDLGDEAVEQCDP-QIITQASSLSQ-LPV---ESFSIDTVLSISSS-----HELPG-----DQLLEEISRVL 80 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~-~v~~~~~d~e~-lp~---~~~sfD~V~s~~~l-----~~~~~-----~~~L~ei~RvL 80 (271)
++.|++.|++..... .... ++.++++|+.+ ++. ...+||+|++.... ..... ..++.++.++|
T Consensus 244 s~~al~~A~~N~~~n--~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L 321 (385)
T 2b78_A 244 AKRSRALSLAHFEAN--HLDMANHQLVVMDVFDYFKYARRHHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEIL 321 (385)
T ss_dssp CTTHHHHHHHHHHHT--TCCCTTEEEEESCHHHHHHHHHHTTCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTE
T ss_pred CHHHHHHHHHHHHHc--CCCccceEEEECCHHHHHHHHHHhCCCccEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhc
Confidence 455666666653111 0112 68999999865 331 24589999984322 12222 45778889999
Q ss_pred cCCcEEEEEecCCCCcccHHHHHHHHHHHHHHcCCc
Q 024162 81 KPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFL 116 (271)
Q Consensus 81 KPGG~l~i~~~~~~~~~e~~~~~~~l~~~l~laGF~ 116 (271)
+|||.|+++...... .....++.+...+..+|+.
T Consensus 322 ~pgG~l~~~~~~~~~--~~~~~~~~i~~~~~~~g~~ 355 (385)
T 2b78_A 322 SENGLIIASTNAANM--TVSQFKKQIEKGFGKQKHT 355 (385)
T ss_dssp EEEEEEEEEECCTTS--CHHHHHHHHHHHHTTCCCE
T ss_pred CCCcEEEEEeCCCcC--CHHHHHHHHHHHHHHcCCc
Confidence 999999999866431 1222223344445555554
No 246
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=94.58 E-value=0.082 Score=47.91 Aligned_cols=70 Identities=11% Similarity=0.186 Sum_probs=50.5
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCChHHHHHHHHHhccCCcEEEEEecCC
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYKKLT 93 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~~~~L~ei~RvLKPGG~l~i~~~~~ 93 (271)
++.+++.+++..... ....++.++++|+.++. .+||+|++..... ...++.++.++|+|||.|++.+...
T Consensus 225 s~~ai~~a~~n~~~n--~l~~~v~~~~~D~~~~~---~~fD~Vi~dpP~~---~~~~l~~~~~~L~~gG~l~~~~~~~ 294 (336)
T 2yx1_A 225 NPHAIELLKKNIKLN--KLEHKIIPILSDVREVD---VKGNRVIMNLPKF---AHKFIDKALDIVEEGGVIHYYTIGK 294 (336)
T ss_dssp CHHHHHHHHHHHHHT--TCTTTEEEEESCGGGCC---CCEEEEEECCTTT---GGGGHHHHHHHEEEEEEEEEEEEES
T ss_pred CHHHHHHHHHHHHHc--CCCCcEEEEECChHHhc---CCCcEEEECCcHh---HHHHHHHHHHHcCCCCEEEEEEeec
Confidence 566777777653211 11136899999998776 7899999853211 1378899999999999999988764
No 247
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=94.50 E-value=0.13 Score=45.00 Aligned_cols=94 Identities=14% Similarity=0.056 Sum_probs=61.2
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCChHHHHHHHHHhccCCcEEEEEecCCCC
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYKKLTSD 95 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~~~~L~ei~RvLKPGG~l~i~~~~~~~ 95 (271)
++.+++.|++..... ....+|.+.++|+.+...+...||+|++....-.+ -..+|.+..+.|+++|+|+++...
T Consensus 54 ~~~al~~A~~N~~~~--gl~~~I~v~~gD~l~~~~~~~~~D~IviagmGg~l-I~~IL~~~~~~L~~~~~lIlq~~~--- 127 (244)
T 3gnl_A 54 VDGPFQSAQKQVRSS--GLTEQIDVRKGNGLAVIEKKDAIDTIVIAGMGGTL-IRTILEEGAAKLAGVTKLILQPNI--- 127 (244)
T ss_dssp SHHHHHHHHHHHHHT--TCTTTEEEEECSGGGGCCGGGCCCEEEEEEECHHH-HHHHHHHTGGGGTTCCEEEEEESS---
T ss_pred CHHHHHHHHHHHHHc--CCCceEEEEecchhhccCccccccEEEEeCCchHH-HHHHHHHHHHHhCCCCEEEEEcCC---
Confidence 345555565543110 11236899999987765554569998863221100 156788899999999999999754
Q ss_pred cccHHHHHHHHHHHHHHcCCcchhhh
Q 024162 96 KGDVDKAISALEGKLLLAGFLDAQRI 121 (271)
Q Consensus 96 ~~e~~~~~~~l~~~l~laGF~~v~~~ 121 (271)
.. ..++..|..+||..++..
T Consensus 128 --~~----~~lr~~L~~~Gf~i~~E~ 147 (244)
T 3gnl_A 128 --AA----WQLREWSEQNNWLITSEA 147 (244)
T ss_dssp --CH----HHHHHHHHHHTEEEEEEE
T ss_pred --Ch----HHHHHHHHHCCCEEEEEE
Confidence 11 267788999999875543
No 248
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=94.22 E-value=0.14 Score=45.53 Aligned_cols=76 Identities=9% Similarity=0.055 Sum_probs=49.8
Q ss_pred CCeEEEeccCCCCCCCCCceeEEEeccccccCChHHHHHHHHHhccCCcEEEEEecCCCCcccHHHHHHHHHHHHHHcCC
Q 024162 36 PQIITQASSLSQLPVESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGF 115 (271)
Q Consensus 36 ~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~~~~L~ei~RvLKPGG~l~i~~~~~~~~~e~~~~~~~l~~~l~laGF 115 (271)
.++.+..+|+..++. .+.||.|++..... ...+|....++|||||.++++........ .....+.+.+.+...||
T Consensus 175 ~~v~~~~~D~~~~~~-~~~~D~Vi~~~p~~---~~~~l~~a~~~lk~gG~ih~~~~~~e~~~-~~~~~e~i~~~~~~~g~ 249 (278)
T 3k6r_A 175 DRMSAYNMDNRDFPG-ENIADRILMGYVVR---THEFIPKALSIAKDGAIIHYHNTVPEKLM-PREPFETFKRITKEYGY 249 (278)
T ss_dssp TTEEEECSCTTTCCC-CSCEEEEEECCCSS---GGGGHHHHHHHEEEEEEEEEEEEEEGGGT-TTTTHHHHHHHHHHTTC
T ss_pred CcEEEEeCcHHHhcc-ccCCCEEEECCCCc---HHHHHHHHHHHcCCCCEEEEEeeeccccc-chhHHHHHHHHHHHcCC
Confidence 458889999888753 57899998764211 25678889999999999988876432110 01112244555666777
Q ss_pred c
Q 024162 116 L 116 (271)
Q Consensus 116 ~ 116 (271)
.
T Consensus 250 ~ 250 (278)
T 3k6r_A 250 D 250 (278)
T ss_dssp E
T ss_pred c
Confidence 5
No 249
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=94.08 E-value=0.17 Score=43.64 Aligned_cols=93 Identities=12% Similarity=-0.009 Sum_probs=58.9
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCC-CCCCCCCceeEEEeccccccCChHHHHHHHHHhccCCcEEEEEecCCC
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLS-QLPVESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYKKLTS 94 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e-~lp~~~~sfD~V~s~~~l~~~~~~~~L~ei~RvLKPGG~l~i~~~~~~ 94 (271)
++.+++.|++..... ....+|.+.++|+. .++.. ..||+|+....--.+ -..++.+..+.|+|+|+|+++...
T Consensus 48 ~~~al~~A~~N~~~~--gl~~~i~~~~~d~l~~l~~~-~~~D~IviaG~Gg~~-i~~Il~~~~~~L~~~~~lVlq~~~-- 121 (225)
T 3kr9_A 48 VEGPYQSAVKNVEAH--GLKEKIQVRLANGLAAFEET-DQVSVITIAGMGGRL-IARILEEGLGKLANVERLILQPNN-- 121 (225)
T ss_dssp SHHHHHHHHHHHHHT--TCTTTEEEEECSGGGGCCGG-GCCCEEEEEEECHHH-HHHHHHHTGGGCTTCCEEEEEESS--
T ss_pred CHHHHHHHHHHHHHc--CCCceEEEEECchhhhcccC-cCCCEEEEcCCChHH-HHHHHHHHHHHhCCCCEEEEECCC--
Confidence 345555555542110 11236899999884 44432 269998864321100 167889999999999999997753
Q ss_pred CcccHHHHHHHHHHHHHHcCCcchhhh
Q 024162 95 DKGDVDKAISALEGKLLLAGFLDAQRI 121 (271)
Q Consensus 95 ~~~e~~~~~~~l~~~l~laGF~~v~~~ 121 (271)
.. ..++..|..+||..++..
T Consensus 122 ---~~----~~vr~~L~~~Gf~i~~e~ 141 (225)
T 3kr9_A 122 ---RE----DDLRIWLQDHGFQIVAES 141 (225)
T ss_dssp ---CH----HHHHHHHHHTTEEEEEEE
T ss_pred ---CH----HHHHHHHHHCCCEEEEEE
Confidence 11 256778899999876653
No 250
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=94.04 E-value=0.13 Score=47.85 Aligned_cols=74 Identities=11% Similarity=-0.036 Sum_probs=46.7
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCC-CCCCCceeEEEecccccc---------CCh-HHHHHHHHHhccCCc
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQL-PVESFSIDTVLSISSSHE---------LPG-DQLLEEISRVLKPGG 84 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~l-p~~~~sfD~V~s~~~l~~---------~~~-~~~L~ei~RvLKPGG 84 (271)
++.|++.+++..... +....+.++|+.++ +...+.||+|++...... ... ..++.++.++|||||
T Consensus 245 s~~al~~a~~n~~~n----g~~~~~~~~D~~~~l~~~~~~fD~Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG 320 (393)
T 4dmg_A 245 DLEALGVLDQAALRL----GLRVDIRHGEALPTLRGLEGPFHHVLLDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEG 320 (393)
T ss_dssp CHHHHHHHHHHHHHH----TCCCEEEESCHHHHHHTCCCCEEEEEECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEE
T ss_pred CHHHHHHHHHHHHHh----CCCCcEEEccHHHHHHHhcCCCCEEEECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 567777777763211 12234557887654 222334999998543211 112 578899999999999
Q ss_pred EEEEEecCC
Q 024162 85 TILIYKKLT 93 (271)
Q Consensus 85 ~l~i~~~~~ 93 (271)
+|++.+...
T Consensus 321 ~Lv~~s~s~ 329 (393)
T 4dmg_A 321 FLWLSSCSY 329 (393)
T ss_dssp EEEEEECCT
T ss_pred EEEEEECCC
Confidence 999877654
No 251
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=93.87 E-value=0.23 Score=44.29 Aligned_cols=70 Identities=9% Similarity=0.054 Sum_probs=54.6
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCCh---HHHHHHHHHhccCCcEEEEEec
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPG---DQLLEEISRVLKPGGTILIYKK 91 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~---~~~L~ei~RvLKPGG~l~i~~~ 91 (271)
.+.|++.+++.... .+....+.+.|...-+ +.+.||+|+++-++|++.+ ...+ +++..|+|+|.++-.+.
T Consensus 165 d~~~le~a~~~l~~----~g~~~~~~v~D~~~~~-p~~~~DvaL~lkti~~Le~q~kg~g~-~ll~aL~~~~vvVSfp~ 237 (281)
T 3lcv_B 165 DARLVGFVDEALTR----LNVPHRTNVADLLEDR-LDEPADVTLLLKTLPCLETQQRGSGW-EVIDIVNSPNIVVTFPT 237 (281)
T ss_dssp BHHHHHHHHHHHHH----TTCCEEEEECCTTTSC-CCSCCSEEEETTCHHHHHHHSTTHHH-HHHHHSSCSEEEEEEEC
T ss_pred CHHHHHHHHHHHHh----cCCCceEEEeeecccC-CCCCcchHHHHHHHHHhhhhhhHHHH-HHHHHhCCCCEEEeccc
Confidence 57889999987522 2356777777775444 5678999999999999976 3566 89999999999988775
No 252
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=93.75 E-value=0.034 Score=49.53 Aligned_cols=55 Identities=22% Similarity=0.319 Sum_probs=39.6
Q ss_pred CeEEEeccCCC-CC-CCCCceeEEEeccccccC--------------------Ch-HHHHHHHHHhccCCcEEEEEec
Q 024162 37 QIITQASSLSQ-LP-VESFSIDTVLSISSSHEL--------------------PG-DQLLEEISRVLKPGGTILIYKK 91 (271)
Q Consensus 37 ~v~~~~~d~e~-lp-~~~~sfD~V~s~~~l~~~--------------------~~-~~~L~ei~RvLKPGG~l~i~~~ 91 (271)
.+.++++|..+ ++ +++++||+|++.-.+... .. ..++.+++|+|||||.|++...
T Consensus 21 ~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~ 98 (297)
T 2zig_A 21 VHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVG 98 (297)
T ss_dssp CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEEC
Confidence 46788888865 33 568899999996433211 11 3577899999999999988754
No 253
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=93.46 E-value=0.17 Score=46.52 Aligned_cols=77 Identities=19% Similarity=0.127 Sum_probs=49.0
Q ss_pred CeEEEeccCCCCCCCCCceeEEEeccccc---c-------CCh--------------------HHHHHHHHHhccCCcEE
Q 024162 37 QIITQASSLSQLPVESFSIDTVLSISSSH---E-------LPG--------------------DQLLEEISRVLKPGGTI 86 (271)
Q Consensus 37 ~v~~~~~d~e~lp~~~~sfD~V~s~~~l~---~-------~~~--------------------~~~L~ei~RvLKPGG~l 86 (271)
++.++++|+...+. ...||+|+++-.+. . +.. ..++..+.++|+|||++
T Consensus 82 ~~~~~~~D~~~~~~-~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~ 160 (421)
T 2ih2_A 82 WAEGILADFLLWEP-GEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVL 160 (421)
T ss_dssp TEEEEESCGGGCCC-SSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEE
T ss_pred CCcEEeCChhhcCc-cCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEE
Confidence 57788888877643 46899999953221 1 211 25689999999999999
Q ss_pred EEEecCCCCcccHHHHHHHHHHHHHHcCCcc
Q 024162 87 LIYKKLTSDKGDVDKAISALEGKLLLAGFLD 117 (271)
Q Consensus 87 ~i~~~~~~~~~e~~~~~~~l~~~l~laGF~~ 117 (271)
++..+..-..... ...++..+...|+..
T Consensus 161 ~~i~p~~~l~~~~---~~~lr~~l~~~~~~~ 188 (421)
T 2ih2_A 161 VFVVPATWLVLED---FALLREFLAREGKTS 188 (421)
T ss_dssp EEEEEGGGGTCGG---GHHHHHHHHHHSEEE
T ss_pred EEEEChHHhcCcc---HHHHHHHHHhcCCeE
Confidence 9887652100111 124556666667643
No 254
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=93.39 E-value=0.28 Score=45.96 Aligned_cols=71 Identities=14% Similarity=0.109 Sum_probs=48.1
Q ss_pred cHHHHHHHHHHhCchhhhcCCCCeEEEeccCCC----CCCCCCceeEEEeccccccCChHHHHHHHHHhccCCcEEEEEe
Q 024162 15 PVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQ----LPVESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYK 90 (271)
Q Consensus 15 ~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~----lp~~~~sfD~V~s~~~l~~~~~~~~L~ei~RvLKPGG~l~i~~ 90 (271)
.++.|++.|++..... ...++.|+++++.+ +++.+++||+|++.-..... ..+++.+. .++|++.++++.
T Consensus 316 ~s~~al~~A~~n~~~~---~~~~v~f~~~d~~~~l~~~~~~~~~fD~Vv~dPPr~g~--~~~~~~l~-~~~p~~ivyvsc 389 (433)
T 1uwv_A 316 GVPALVEKGQQNARLN---GLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDPARAGA--AGVMQQII-KLEPIRIVYVSC 389 (433)
T ss_dssp SCHHHHHHHHHHHHHT---TCCSEEEEECCTTSCCSSSGGGTTCCSEEEECCCTTCC--HHHHHHHH-HHCCSEEEEEES
T ss_pred CCHHHHHHHHHHHHHc---CCCceEEEECCHHHHhhhhhhhcCCCCEEEECCCCccH--HHHHHHHH-hcCCCeEEEEEC
Confidence 3677888888764211 11368999999987 45677899999986443322 34555554 479999988875
Q ss_pred c
Q 024162 91 K 91 (271)
Q Consensus 91 ~ 91 (271)
.
T Consensus 390 ~ 390 (433)
T 1uwv_A 390 N 390 (433)
T ss_dssp C
T ss_pred C
Confidence 3
No 255
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=93.24 E-value=0.22 Score=44.33 Aligned_cols=56 Identities=20% Similarity=0.196 Sum_probs=42.0
Q ss_pred CeEEEeccCCCCCCCCCceeEEEeccccc----cCCh---HHHHHHHHHhccCC-cEEEEEecC
Q 024162 37 QIITQASSLSQLPVESFSIDTVLSISSSH----ELPG---DQLLEEISRVLKPG-GTILIYKKL 92 (271)
Q Consensus 37 ~v~~~~~d~e~lp~~~~sfD~V~s~~~l~----~~~~---~~~L~ei~RvLKPG-G~l~i~~~~ 92 (271)
++.+.+.+++...++.+.||+|++-.+.+ +... -.+|..+.++|||| |.|++..+.
T Consensus 123 ~ii~~~~~~dv~~l~~~~~DlVlsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~ 186 (277)
T 3evf_A 123 NIITFKDKTDIHRLEPVKCDTLLCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLA 186 (277)
T ss_dssp GGEEEECSCCTTTSCCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred CeEEEeccceehhcCCCCccEEEecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecC
Confidence 45666777777778889999999966544 2222 13568889999999 999998876
No 256
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=92.63 E-value=0.14 Score=46.34 Aligned_cols=72 Identities=21% Similarity=0.250 Sum_probs=51.1
Q ss_pred CCeEEEeccCC-CCC-CCCCceeEEEe-ccccccCCh---HHHHHHHHHhccCCcEEEEEecCCCCcccHHHHHHHHHHH
Q 024162 36 PQIITQASSLS-QLP-VESFSIDTVLS-ISSSHELPG---DQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGK 109 (271)
Q Consensus 36 ~~v~~~~~d~e-~lp-~~~~sfD~V~s-~~~l~~~~~---~~~L~ei~RvLKPGG~l~i~~~~~~~~~e~~~~~~~l~~~ 109 (271)
..+.+..+|+. .++ ++...||+|+. .++...-+. .+++++|+|.++|||+|...... ..+++.
T Consensus 166 v~L~l~~GDa~~~l~~l~~~~~Da~flDgFsP~kNPeLWs~e~f~~l~~~~~pgg~laTYtaa-----------g~VRR~ 234 (308)
T 3vyw_A 166 LSLKVLLGDARKRIKEVENFKADAVFHDAFSPYKNPELWTLDFLSLIKERIDEKGYWVSYSSS-----------LSVRKS 234 (308)
T ss_dssp EEEEEEESCHHHHGGGCCSCCEEEEEECCSCTTTSGGGGSHHHHHHHHTTEEEEEEEEESCCC-----------HHHHHH
T ss_pred EEEEEEechHHHHHhhhcccceeEEEeCCCCcccCcccCCHHHHHHHHHHhCCCcEEEEEeCc-----------HHHHHH
Confidence 34556778875 344 44568999997 333333333 88999999999999999855433 267788
Q ss_pred HHHcCCcch
Q 024162 110 LLLAGFLDA 118 (271)
Q Consensus 110 l~laGF~~v 118 (271)
|..+||...
T Consensus 235 L~~aGF~V~ 243 (308)
T 3vyw_A 235 LLTLGFKVG 243 (308)
T ss_dssp HHHTTCEEE
T ss_pred HHHCCCEEE
Confidence 999999853
No 257
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=92.59 E-value=0.37 Score=44.71 Aligned_cols=74 Identities=15% Similarity=0.158 Sum_probs=53.6
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEecccccc-CC---h-HHHHHHHHHhccC--CcEEEE
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHE-LP---G-DQLLEEISRVLKP--GGTILI 88 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~-~~---~-~~~L~ei~RvLKP--GG~l~i 88 (271)
++.|++.+++..... .....+.+.++|+.+++.+. +||+|+++-.+.. +. . ..+++++.++||+ ||++++
T Consensus 265 d~~al~~Ar~Na~~~--gl~~~I~~~~~D~~~l~~~~-~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~i 341 (384)
T 3ldg_A 265 DGRMVEIARKNAREV--GLEDVVKLKQMRLQDFKTNK-INGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQFI 341 (384)
T ss_dssp CHHHHHHHHHHHHHT--TCTTTEEEEECCGGGCCCCC-CSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEEE
T ss_pred CHHHHHHHHHHHHHc--CCCCceEEEECChHHCCccC-CcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEEEE
Confidence 578888888764221 11235899999999988754 8999999865432 22 2 5677778888887 999999
Q ss_pred EecC
Q 024162 89 YKKL 92 (271)
Q Consensus 89 ~~~~ 92 (271)
.+..
T Consensus 342 it~~ 345 (384)
T 3ldg_A 342 LTND 345 (384)
T ss_dssp EESC
T ss_pred EECC
Confidence 8865
No 258
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=92.50 E-value=0.2 Score=47.04 Aligned_cols=74 Identities=12% Similarity=0.050 Sum_probs=47.8
Q ss_pred HHHHHHHHHHhCc-hhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCCh------------------HHHHHHH
Q 024162 16 VSAVLNAIRDLGD-EAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPG------------------DQLLEEI 76 (271)
Q Consensus 16 s~~mv~~ar~~~~-~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~------------------~~~L~ei 76 (271)
.+.++++++.... .+. ....+.+.++|....+.. ..||+|+++-.+..... ..+++++
T Consensus 217 ~~~~~~lA~~nl~l~g~--~~~~~~i~~gD~l~~~~~-~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 293 (445)
T 2okc_A 217 TPLVVTLASMNLYLHGI--GTDRSPIVCEDSLEKEPS-TLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHM 293 (445)
T ss_dssp CHHHHHHHHHHHHHTTC--CSSCCSEEECCTTTSCCS-SCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCC--CcCCCCEeeCCCCCCccc-CCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHH
Confidence 3566666665421 111 001345677887766554 38999999755432211 3789999
Q ss_pred HHhccCCcEEEEEecC
Q 024162 77 SRVLKPGGTILIYKKL 92 (271)
Q Consensus 77 ~RvLKPGG~l~i~~~~ 92 (271)
++.|||||++.+..+.
T Consensus 294 ~~~Lk~gG~~a~V~p~ 309 (445)
T 2okc_A 294 MLMLKTGGRAAVVLPD 309 (445)
T ss_dssp HHHEEEEEEEEEEEEH
T ss_pred HHHhccCCEEEEEECC
Confidence 9999999999888753
No 259
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=92.20 E-value=0.32 Score=45.23 Aligned_cols=74 Identities=16% Similarity=0.153 Sum_probs=52.1
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEecccccc-CCh----HHHHHHHHHhccC--CcEEEE
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHE-LPG----DQLLEEISRVLKP--GGTILI 88 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~-~~~----~~~L~ei~RvLKP--GG~l~i 88 (271)
++.|++.|++..... .....|.++++|+.+++.+ .+||+|+++-.+.. +.+ ..+++++.++||+ ||.+++
T Consensus 272 d~~al~~Ar~Na~~~--gl~~~I~~~~~D~~~~~~~-~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~i 348 (393)
T 3k0b_A 272 DARLIEIAKQNAVEA--GLGDLITFRQLQVADFQTE-DEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWSVYV 348 (393)
T ss_dssp CHHHHHHHHHHHHHT--TCTTCSEEEECCGGGCCCC-CCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCEEEE
T ss_pred CHHHHHHHHHHHHHc--CCCCceEEEECChHhCCCC-CCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCEEEE
Confidence 678888888764221 1123589999999998875 48999999855432 221 4567777777876 999999
Q ss_pred EecC
Q 024162 89 YKKL 92 (271)
Q Consensus 89 ~~~~ 92 (271)
.+..
T Consensus 349 it~~ 352 (393)
T 3k0b_A 349 LTSY 352 (393)
T ss_dssp EECC
T ss_pred EECC
Confidence 8865
No 260
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=91.95 E-value=0.11 Score=48.02 Aligned_cols=78 Identities=14% Similarity=0.074 Sum_probs=51.2
Q ss_pred HHHHHHHHHHhCchhhh--cCC---CCeEEEeccCCCCCC----CCCceeEEEecccc-------ccCChHHHHHHH---
Q 024162 16 VSAVLNAIRDLGDEAVE--QCD---PQIITQASSLSQLPV----ESFSIDTVLSISSS-------HELPGDQLLEEI--- 76 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~--~~~---~~v~~~~~d~e~lp~----~~~sfD~V~s~~~l-------~~~~~~~~L~ei--- 76 (271)
.+.|++++|+....... ..+ .++.++.+|+...-- ..+.||+|+.-..- .++....+++.+
T Consensus 220 D~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~ 299 (364)
T 2qfm_A 220 DQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDL 299 (364)
T ss_dssp CHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCCCceEEEECCCCcccCcCchhhhHHHHHHHHHHH
Confidence 68899999987421100 111 268888998875432 35789999984321 112336777777
Q ss_pred -HHhccCCcEEEEEecCC
Q 024162 77 -SRVLKPGGTILIYKKLT 93 (271)
Q Consensus 77 -~RvLKPGG~l~i~~~~~ 93 (271)
.++|+|||.|++.....
T Consensus 300 ~~~~L~pgGilv~qs~s~ 317 (364)
T 2qfm_A 300 SMKVLKQDGKYFTQGNCV 317 (364)
T ss_dssp HHHTEEEEEEEEEEEEET
T ss_pred HHhhCCCCcEEEEEcCCc
Confidence 89999999999886543
No 261
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=91.29 E-value=0.48 Score=44.43 Aligned_cols=68 Identities=16% Similarity=0.173 Sum_probs=46.2
Q ss_pred cHHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccCChHHHHHHHHHhccCCcEEEEEe
Q 024162 15 PVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYK 90 (271)
Q Consensus 15 ~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~~~~L~ei~RvLKPGG~l~i~~ 90 (271)
.++.|++.+++..... +..+.|+++|+.++... +||+|++......+ ...+++.+. .|+|||.++++.
T Consensus 320 ~s~~ai~~A~~n~~~n----gl~v~~~~~d~~~~~~~--~fD~Vv~dPPr~g~-~~~~~~~l~-~l~p~givyvsc 387 (425)
T 2jjq_A 320 SNEFAIEMARRNVEIN----NVDAEFEVASDREVSVK--GFDTVIVDPPRAGL-HPRLVKRLN-REKPGVIVYVSC 387 (425)
T ss_dssp SCHHHHHHHHHHHHHH----TCCEEEEECCTTTCCCT--TCSEEEECCCTTCS-CHHHHHHHH-HHCCSEEEEEES
T ss_pred CCHHHHHHHHHHHHHc----CCcEEEEECChHHcCcc--CCCEEEEcCCccch-HHHHHHHHH-hcCCCcEEEEEC
Confidence 3678888888764211 12289999999887533 89999986442212 145666554 599999999985
No 262
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=91.03 E-value=0.23 Score=44.12 Aligned_cols=48 Identities=4% Similarity=-0.114 Sum_probs=30.4
Q ss_pred cHHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEeccccccC
Q 024162 15 PVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHEL 67 (271)
Q Consensus 15 ~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~ 67 (271)
.++.|++.++++... ....++.++.+|+..++++ +||+|+++...++.
T Consensus 72 i~~~~~~~a~~~~~~---~~~~~v~~~~~D~~~~~~~--~~D~Vv~n~py~~~ 119 (299)
T 2h1r_A 72 IDSRMISEVKKRCLY---EGYNNLEVYEGDAIKTVFP--KFDVCTANIPYKIS 119 (299)
T ss_dssp SCHHHHHHHHHHHHH---TTCCCEEC----CCSSCCC--CCSEEEEECCGGGH
T ss_pred CCHHHHHHHHHHHHH---cCCCceEEEECchhhCCcc--cCCEEEEcCCcccc
Confidence 367888888876421 1124688999999888764 89999997665543
No 263
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=90.90 E-value=0.46 Score=43.96 Aligned_cols=74 Identities=15% Similarity=0.171 Sum_probs=53.0
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEecccccc-CC---h-HHHHHHHHHhccC--CcEEEE
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHE-LP---G-DQLLEEISRVLKP--GGTILI 88 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~-~~---~-~~~L~ei~RvLKP--GG~l~i 88 (271)
++.|++.|++..... .....|.+.++|+.+++.+ .+||+|+++-.+.. +. . ..+++++.++||+ ||.+++
T Consensus 266 d~~ai~~Ar~Na~~~--gl~~~i~~~~~D~~~l~~~-~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~i 342 (385)
T 3ldu_A 266 DEESIDIARENAEIA--GVDEYIEFNVGDATQFKSE-DEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSYYL 342 (385)
T ss_dssp CHHHHHHHHHHHHHH--TCGGGEEEEECCGGGCCCS-CBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEEEE
T ss_pred CHHHHHHHHHHHHHc--CCCCceEEEECChhhcCcC-CCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEEEE
Confidence 678888888864221 1112689999999998765 48999999765432 22 1 5677778888887 999998
Q ss_pred EecC
Q 024162 89 YKKL 92 (271)
Q Consensus 89 ~~~~ 92 (271)
.+..
T Consensus 343 it~~ 346 (385)
T 3ldu_A 343 ITSY 346 (385)
T ss_dssp EESC
T ss_pred EECC
Confidence 8765
No 264
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=90.26 E-value=0.3 Score=44.03 Aligned_cols=56 Identities=14% Similarity=0.065 Sum_probs=39.9
Q ss_pred CeEEEeccCCC-CC-CCCCceeEEEecccccc--------------CCh-HHHHHHHHHhccCCcEEEEEecC
Q 024162 37 QIITQASSLSQ-LP-VESFSIDTVLSISSSHE--------------LPG-DQLLEEISRVLKPGGTILIYKKL 92 (271)
Q Consensus 37 ~v~~~~~d~e~-lp-~~~~sfD~V~s~~~l~~--------------~~~-~~~L~ei~RvLKPGG~l~i~~~~ 92 (271)
....+++|... +. +++++||+|++.-.... +.. ...|.+++|+|||||.+++....
T Consensus 14 ~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d 86 (323)
T 1boo_A 14 NGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGG 86 (323)
T ss_dssp SEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred CceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECC
Confidence 45667787653 43 66889999998533211 112 67899999999999999987543
No 265
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=87.51 E-value=1.3 Score=43.87 Aligned_cols=53 Identities=15% Similarity=0.144 Sum_probs=40.0
Q ss_pred CCCCeEEEeccCCCCCCCCCceeEEEeccccccCC---hHHHHHHHHHhccCCcEEE
Q 024162 34 CDPQIITQASSLSQLPVESFSIDTVLSISSSHELP---GDQLLEEISRVLKPGGTIL 87 (271)
Q Consensus 34 ~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~---~~~~L~ei~RvLKPGG~l~ 87 (271)
.+.+|+.++++++++.++ +.+|+|+|-..-..+. ..+.|...-|.|||||.++
T Consensus 409 ~~dkVtVI~gd~eev~LP-EKVDIIVSEwMG~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 409 WGSQVTVVSSDMREWVAP-EKADIIVSELLGSFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp TGGGEEEEESCTTTCCCS-SCEEEEECCCCBTTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred CCCeEEEEeCcceeccCC-cccCEEEEEcCcccccccCCHHHHHHHHHhcCCCcEEc
Confidence 346799999999998876 5899999944322221 1567778889999999985
No 266
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=87.00 E-value=2.5 Score=38.78 Aligned_cols=91 Identities=16% Similarity=0.092 Sum_probs=57.6
Q ss_pred CccEEEEecCCcccHHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCC-CCCCceeEEEe--cccc------------cc
Q 024162 2 QSAVLALSEDKILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLP-VESFSIDTVLS--ISSS------------HE 66 (271)
Q Consensus 2 ~~~vl~~td~~~~~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp-~~~~sfD~V~s--~~~l------------~~ 66 (271)
..+-|++.|.+..=...+.+.++....... ....++.....|...++ +..+.||.|+. -++- .|
T Consensus 171 ~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~-~~~~~v~v~~~D~~~~~~~~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~ 249 (359)
T 4fzv_A 171 CCRNLAANDLSPSRIARLQKILHSYVPEEI-RDGNQVRVTSWDGRKWGELEGDTYDRVLVDVPCTTDRHSLHEEENNIFK 249 (359)
T ss_dssp CEEEEEEECSCHHHHHHHHHHHHHHSCTTT-TTSSSEEEECCCGGGHHHHSTTCEEEEEEECCCCCHHHHTTCCTTCTTS
T ss_pred CCCcEEEEcCCHHHHHHHHHHHHHhhhhhh-ccCCceEEEeCchhhcchhccccCCEEEECCccCCCCCcccccChhhhh
Confidence 344577777776666677666666532111 12246777777777664 45678999996 1110 01
Q ss_pred -CC--------h--HHHHHHHHHhccCCcEEEEEecCC
Q 024162 67 -LP--------G--DQLLEEISRVLKPGGTILIYKKLT 93 (271)
Q Consensus 67 -~~--------~--~~~L~ei~RvLKPGG~l~i~~~~~ 93 (271)
+. . .++|....+.|||||+|+.++=+-
T Consensus 250 ~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl 287 (359)
T 4fzv_A 250 RSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSL 287 (359)
T ss_dssp GGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCC
T ss_pred hCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCC
Confidence 11 1 357788899999999999998654
No 267
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=86.71 E-value=1.7 Score=38.92 Aligned_cols=82 Identities=5% Similarity=-0.095 Sum_probs=47.3
Q ss_pred cEEEEecCCcccHHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCC---CceeEEEecc------ccc------cC-
Q 024162 4 AVLALSEDKILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVES---FSIDTVLSIS------SSH------EL- 67 (271)
Q Consensus 4 ~vl~~td~~~~~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~---~sfD~V~s~~------~l~------~~- 67 (271)
+.++..|.. +.+++.+++.... ....++.++++|+..++... .+||+|++-. .+. |.
T Consensus 128 g~V~a~D~~----~~~l~~~~~n~~r---~g~~~v~~~~~D~~~~~~~~~~~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~ 200 (309)
T 2b9e_A 128 GKIFAFDLD----AKRLASMATLLAR---AGVSCCELAEEDFLAVSPSDPRYHEVHYILLDPSCSGSGMPSRQLEEPGAG 200 (309)
T ss_dssp SEEEEEESC----HHHHHHHHHHHHH---TTCCSEEEEECCGGGSCTTCGGGTTEEEEEECCCCCC--------------
T ss_pred CEEEEEeCC----HHHHHHHHHHHHH---cCCCeEEEEeCChHhcCccccccCCCCEEEEcCCcCCCCCCccCCChhhhc
Confidence 345555553 4555555554311 01146889999988776432 5799999721 111 10
Q ss_pred --C--h--------HHHHHHHHHhccCCcEEEEEecCC
Q 024162 68 --P--G--------DQLLEEISRVLKPGGTILIYKKLT 93 (271)
Q Consensus 68 --~--~--------~~~L~ei~RvLKPGG~l~i~~~~~ 93 (271)
. + ..+|...++.|+ ||+|++++-.-
T Consensus 201 ~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~ 237 (309)
T 2b9e_A 201 TPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSL 237 (309)
T ss_dssp ----CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCC
T ss_pred cCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCC
Confidence 0 1 246777778887 99999887553
No 268
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=85.98 E-value=0.18 Score=43.25 Aligned_cols=54 Identities=13% Similarity=0.066 Sum_probs=35.5
Q ss_pred CCeEEEeccCCCCCCCC-CceeEEEeccccccC-----------Ch-HHHH----HHHHHhccCCcEEEEEe
Q 024162 36 PQIITQASSLSQLPVES-FSIDTVLSISSSHEL-----------PG-DQLL----EEISRVLKPGGTILIYK 90 (271)
Q Consensus 36 ~~v~~~~~d~e~lp~~~-~sfD~V~s~~~l~~~-----------~~-~~~L----~ei~RvLKPGG~l~i~~ 90 (271)
.++.++++|+.+++++. ++| .|+++..++.. .. ..++ ..+.|+|+|||+|++..
T Consensus 75 ~~v~~~~~D~~~~~~~~~~~f-~vv~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~ 145 (245)
T 1yub_A 75 TRVTLIHQDILQFQFPNKQRY-KIVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLL 145 (245)
T ss_dssp SEEEECCSCCTTTTCCCSSEE-EEEEECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHT
T ss_pred CceEEEECChhhcCcccCCCc-EEEEeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhh
Confidence 46889999999999874 689 66665432221 11 2233 55788888888776654
No 269
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=84.43 E-value=0.95 Score=43.78 Aligned_cols=55 Identities=11% Similarity=-0.007 Sum_probs=38.9
Q ss_pred eEEEeccCCCCC-CCCCceeEEEeccccccCC---------------hHHHHHHHHHhccCCcEEEEEecC
Q 024162 38 IITQASSLSQLP-VESFSIDTVLSISSSHELP---------------GDQLLEEISRVLKPGGTILIYKKL 92 (271)
Q Consensus 38 v~~~~~d~e~lp-~~~~sfD~V~s~~~l~~~~---------------~~~~L~ei~RvLKPGG~l~i~~~~ 92 (271)
+.+.++|....+ .....||+|+++-.+.... .-.++..+.+.|||||++.+..+.
T Consensus 244 ~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p~ 314 (541)
T 2ar0_A 244 GAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVPD 314 (541)
T ss_dssp BSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred CCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEecC
Confidence 455667765443 4467899999975432211 147999999999999999888754
No 270
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=83.68 E-value=1 Score=38.62 Aligned_cols=57 Identities=5% Similarity=-0.021 Sum_probs=36.0
Q ss_pred cHHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCC-CceeEEEeccccccCChHHHHHHHHHh
Q 024162 15 PVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVES-FSIDTVLSISSSHELPGDQLLEEISRV 79 (271)
Q Consensus 15 ~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~-~sfD~V~s~~~l~~~~~~~~L~ei~Rv 79 (271)
.++.|++.++++... ..++.++++|+.++++++ ..| .|+++..+++ ....+..+.+.
T Consensus 60 ~~~~~~~~a~~~~~~-----~~~v~~~~~D~~~~~~~~~~~~-~vv~nlPy~~--~~~~l~~~l~~ 117 (244)
T 1qam_A 60 IDHKLCKTTENKLVD-----HDNFQVLNKDILQFKFPKNQSY-KIFGNIPYNI--STDIIRKIVFD 117 (244)
T ss_dssp SCHHHHHHHHHHTTT-----CCSEEEECCCGGGCCCCSSCCC-EEEEECCGGG--HHHHHHHHHHS
T ss_pred CCHHHHHHHHHhhcc-----CCCeEEEEChHHhCCcccCCCe-EEEEeCCccc--CHHHHHHHHhc
Confidence 367888888887521 257899999999999874 456 4555544332 23344444443
No 271
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=83.38 E-value=1.1 Score=44.89 Aligned_cols=54 Identities=17% Similarity=0.126 Sum_probs=41.4
Q ss_pred CCCCeEEEeccCCCCCCC-----CCceeEEEeccccccCCh---HHHHHHHHHhccCCcEEE
Q 024162 34 CDPQIITQASSLSQLPVE-----SFSIDTVLSISSSHELPG---DQLLEEISRVLKPGGTIL 87 (271)
Q Consensus 34 ~~~~v~~~~~d~e~lp~~-----~~sfD~V~s~~~l~~~~~---~~~L~ei~RvLKPGG~l~ 87 (271)
...+|+.++++++++.++ .+.+|+|+|-..-....+ .+.|..+.|.|||||.++
T Consensus 470 ~~d~VtVI~gd~eev~lp~~~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 470 WKRRVTIIESDMRSLPGIAKDRGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp TTTCSEEEESCGGGHHHHHHHTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred CCCeEEEEeCchhhcccccccCCCCcccEEEEeccccccchhccHHHHHHHHHhCCCCcEEE
Confidence 345689999999998774 678999999554332222 578888899999999875
No 272
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=82.90 E-value=2.4 Score=42.35 Aligned_cols=75 Identities=21% Similarity=0.162 Sum_probs=47.5
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCC--CCCCCceeEEEecccccc-CC---h-HHHHH---HHHHhccCCcE
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQL--PVESFSIDTVLSISSSHE-LP---G-DQLLE---EISRVLKPGGT 85 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~l--p~~~~sfD~V~s~~~l~~-~~---~-~~~L~---ei~RvLKPGG~ 85 (271)
.+.|++.|+...... .....|.+.++|+.++ |...++||+|+++-.+.. +. . ..+++ ++.+.+.|||+
T Consensus 265 d~~av~~A~~N~~~a--gv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk~~~~g~~ 342 (703)
T 3v97_A 265 DARVIQRARTNARLA--GIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWN 342 (703)
T ss_dssp CHHHHHHHHHHHHHT--TCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHHHHCTTCE
T ss_pred CHHHHHHHHHHHHHc--CCCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHHhhCCCCe
Confidence 567888888764211 1112489999999887 444458999999855432 11 1 33444 44555568999
Q ss_pred EEEEecC
Q 024162 86 ILIYKKL 92 (271)
Q Consensus 86 l~i~~~~ 92 (271)
+++.+..
T Consensus 343 ~~ilt~~ 349 (703)
T 3v97_A 343 LSLFSAS 349 (703)
T ss_dssp EEEEESC
T ss_pred EEEEeCC
Confidence 9998653
No 273
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=82.52 E-value=4.3 Score=34.19 Aligned_cols=69 Identities=10% Similarity=-0.070 Sum_probs=43.4
Q ss_pred HHHHHHHHHHhCchhhhcC--CCCeEEEeccCCCC---------------C--------C-CCCceeEEEeccccccCCh
Q 024162 16 VSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQL---------------P--------V-ESFSIDTVLSISSSHELPG 69 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~--~~~v~~~~~d~e~l---------------p--------~-~~~sfD~V~s~~~l~~~~~ 69 (271)
.+.+.+.+|+..... .. ..+|.++.+++... + + ..+.||+|+.=... .
T Consensus 60 d~~~~~~ar~~l~~~--g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~l~~~~~~i~~~~~~~~fDlIfIDg~k----~ 133 (202)
T 3cvo_A 60 DRAWARMMKAWLAAN--PPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRSYPDYPLAVWRTEGFRHPDVVLVDGRF----R 133 (202)
T ss_dssp CHHHHHHHHHHHHHS--CCCTTCEEEEEECCCSSBCGGGCBSSSTTGGGTTHHHHGGGGCTTCCCCSEEEECSSS----H
T ss_pred CHHHHHHHHHHHHHc--CCCCCCceEEEEeCchhhhcccccccchhhhhHHHHhhhhhccccCCCCCEEEEeCCC----c
Confidence 456677777653211 11 24688888886542 2 2 23689999985421 1
Q ss_pred HHHHHHHHHhccCCcEEEEEe
Q 024162 70 DQLLEEISRVLKPGGTILIYK 90 (271)
Q Consensus 70 ~~~L~ei~RvLKPGG~l~i~~ 90 (271)
...+..+.+.|+|||++++-+
T Consensus 134 ~~~~~~~l~~l~~GG~Iv~DN 154 (202)
T 3cvo_A 134 VGCALATAFSITRPVTLLFDD 154 (202)
T ss_dssp HHHHHHHHHHCSSCEEEEETT
T ss_pred hhHHHHHHHhcCCCeEEEEeC
Confidence 355666779999999996544
No 274
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=81.65 E-value=0.61 Score=53.07 Aligned_cols=42 Identities=17% Similarity=0.152 Sum_probs=16.2
Q ss_pred CCCCceeEEEeccccccCCh-HHHHHHHHHhccCCcEEEEEec
Q 024162 50 VESFSIDTVLSISSSHELPG-DQLLEEISRVLKPGGTILIYKK 91 (271)
Q Consensus 50 ~~~~sfD~V~s~~~l~~~~~-~~~L~ei~RvLKPGG~l~i~~~ 91 (271)
+..++||+|++.+++|-..+ ...|.+++++|||||+|++.+.
T Consensus 1307 ~~~~~ydlvia~~vl~~t~~~~~~l~~~~~lL~p~G~l~~~e~ 1349 (2512)
T 2vz8_A 1307 GSLGKADLLVCNCALATLGDPAVAVGNMAATLKEGGFLLLHTL 1349 (2512)
T ss_dssp -----CCEEEEECC--------------------CCEEEEEEC
T ss_pred CCCCceeEEEEcccccccccHHHHHHHHHHhcCCCcEEEEEec
Confidence 34678999999998887766 7899999999999999998764
No 275
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=81.37 E-value=1.3 Score=38.24 Aligned_cols=60 Identities=13% Similarity=0.163 Sum_probs=37.0
Q ss_pred CCCCceeEEEeccccccC--------------Ch-HHHHHHHHHhccCCcEEEEEecCCCCcccHHHHHHHHHHHHHHcC
Q 024162 50 VESFSIDTVLSISSSHEL--------------PG-DQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAG 114 (271)
Q Consensus 50 ~~~~sfD~V~s~~~l~~~--------------~~-~~~L~ei~RvLKPGG~l~i~~~~~~~~~e~~~~~~~l~~~l~laG 114 (271)
+++++||+|++--....- .- ..+|.+++|+|+|||.+++.... .. ...+...+...|
T Consensus 19 l~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~~~d------~~--~~~~~~~~~~~g 90 (260)
T 1g60_A 19 VENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIFNTP------FN--CAFICQYLVSKG 90 (260)
T ss_dssp SCTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEEECH------HH--HHHHHHHHHHTT
T ss_pred ccccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEEcCc------HH--HHHHHHHHHhhc
Confidence 456789999883322111 11 56888999999999999887411 11 113334566678
Q ss_pred Ccc
Q 024162 115 FLD 117 (271)
Q Consensus 115 F~~ 117 (271)
|.-
T Consensus 91 f~~ 93 (260)
T 1g60_A 91 MIF 93 (260)
T ss_dssp CEE
T ss_pred cce
Confidence 853
No 276
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=80.44 E-value=1.4 Score=40.52 Aligned_cols=50 Identities=12% Similarity=0.024 Sum_probs=36.7
Q ss_pred eEEEeccCCCCCC-CCCceeEEEeccccccCChHHHHHHHHHhccCCcEEEEEe
Q 024162 38 IITQASSLSQLPV-ESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYK 90 (271)
Q Consensus 38 v~~~~~d~e~lp~-~~~sfD~V~s~~~l~~~~~~~~L~ei~RvLKPGG~l~i~~ 90 (271)
+.++++|+..+.. ....||+|+.-- . .....++..+.+.|||||.|+++.
T Consensus 114 i~v~~~Da~~~~~~~~~~fD~I~lDP-~--~~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 114 IVINHDDANRLMAERHRYFHFIDLDP-F--GSPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp EEEEESCHHHHHHHSTTCEEEEEECC-S--SCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEEcCcHHHHHHhccCCCCEEEeCC-C--CCHHHHHHHHHHhcCCCCEEEEEe
Confidence 8888998866532 145799999532 1 112688999999999999888864
No 277
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=80.05 E-value=2.4 Score=39.36 Aligned_cols=50 Identities=14% Similarity=0.057 Sum_probs=36.4
Q ss_pred eEEEeccCCCCC--CCCCceeEEEeccccccCChHHHHHHHHHhccCCcEEEEEe
Q 024162 38 IITQASSLSQLP--VESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYK 90 (271)
Q Consensus 38 v~~~~~d~e~lp--~~~~sfD~V~s~~~l~~~~~~~~L~ei~RvLKPGG~l~i~~ 90 (271)
+.++.+|+..+- .....||+|+.-- +-....++..+.+.|+|||.|+++.
T Consensus 107 v~v~~~Da~~~l~~~~~~~fD~V~lDP---~g~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 107 YEIHGMEANFFLRKEWGFGFDYVDLDP---FGTPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp EEEECSCHHHHHHSCCSSCEEEEEECC---SSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEeCCHHHHHHHhhCCCCcEEEECC---CcCHHHHHHHHHHHhCCCCEEEEEe
Confidence 788888875431 1245799999854 1112578999999999999888875
No 278
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=79.55 E-value=2.3 Score=38.60 Aligned_cols=69 Identities=9% Similarity=0.037 Sum_probs=44.9
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCC--CCC--------------CceeEEEeccccccCChHHHHHHHHHh
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLP--VES--------------FSIDTVLSISSSHELPGDQLLEEISRV 79 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp--~~~--------------~sfD~V~s~~~l~~~~~~~~L~ei~Rv 79 (271)
++.|++.+++..... ...++.|+.++++++. +.. .+||+|+..-... .+..++.+.
T Consensus 244 ~~~ai~~a~~n~~~n---g~~~v~~~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~fD~Vv~dPPr~-----g~~~~~~~~ 315 (369)
T 3bt7_A 244 AKPSVAAAQYNIAAN---HIDNVQIIRMAAEEFTQAMNGVREFNRLQGIDLKSYQCETIFVDPPRS-----GLDSETEKM 315 (369)
T ss_dssp CHHHHHHHHHHHHHT---TCCSEEEECCCSHHHHHHHSSCCCCTTGGGSCGGGCCEEEEEECCCTT-----CCCHHHHHH
T ss_pred CHHHHHHHHHHHHHc---CCCceEEEECCHHHHHHHHhhccccccccccccccCCCCEEEECcCcc-----ccHHHHHHH
Confidence 667777777653211 1146899999987652 222 3799998743221 234667888
Q ss_pred ccCCcEEEEEecC
Q 024162 80 LKPGGTILIYKKL 92 (271)
Q Consensus 80 LKPGG~l~i~~~~ 92 (271)
|+|+|++++....
T Consensus 316 l~~~g~ivyvsc~ 328 (369)
T 3bt7_A 316 VQAYPRILYISCN 328 (369)
T ss_dssp HTTSSEEEEEESC
T ss_pred HhCCCEEEEEECC
Confidence 8899999888755
No 279
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=77.51 E-value=2 Score=38.63 Aligned_cols=54 Identities=20% Similarity=0.242 Sum_probs=36.9
Q ss_pred eEEE-eccCCC-C-CCCCCceeEEEeccccc-----------cCCh-HHHHHHHHHhccCCcEEEEEec
Q 024162 38 IITQ-ASSLSQ-L-PVESFSIDTVLSISSSH-----------ELPG-DQLLEEISRVLKPGGTILIYKK 91 (271)
Q Consensus 38 v~~~-~~d~e~-l-p~~~~sfD~V~s~~~l~-----------~~~~-~~~L~ei~RvLKPGG~l~i~~~ 91 (271)
...+ ++|... + .+++++||+|+.--... |+.. ...|.+++|+|+|||.+++...
T Consensus 39 ~~l~i~gD~l~~L~~l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~~ 107 (319)
T 1eg2_A 39 RHVYDVCDCLDTLAKLPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFGG 107 (319)
T ss_dssp EEEEEECCHHHHHHTSCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ceEEECCcHHHHHHhCccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEcC
Confidence 3445 677643 2 25678999999843221 1112 6788899999999999998754
No 280
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=76.88 E-value=2.8 Score=37.25 Aligned_cols=46 Identities=7% Similarity=-0.023 Sum_probs=35.0
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCCceeEEEecccccc
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHE 66 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~ 66 (271)
++.|++.++++... ..++.++++|+..+++++.+||+|+++..+++
T Consensus 81 d~~li~~a~~~~~~-----~~~v~vi~gD~l~~~~~~~~fD~Iv~NlPy~i 126 (295)
T 3gru_A 81 DKSLEPYANKLKEL-----YNNIEIIWGDALKVDLNKLDFNKVVANLPYQI 126 (295)
T ss_dssp CGGGHHHHHHHHHH-----CSSEEEEESCTTTSCGGGSCCSEEEEECCGGG
T ss_pred CHHHHHHHHHHhcc-----CCCeEEEECchhhCCcccCCccEEEEeCcccc
Confidence 45677777776421 25789999999999999889999998765543
No 281
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=72.00 E-value=5 Score=38.78 Aligned_cols=76 Identities=9% Similarity=0.067 Sum_probs=46.4
Q ss_pred EeccCCCCC-CCCCceeEEEecccccc-------------------------CCh-----HHHHHHHHHhccCCcEEEEE
Q 024162 41 QASSLSQLP-VESFSIDTVLSISSSHE-------------------------LPG-----DQLLEEISRVLKPGGTILIY 89 (271)
Q Consensus 41 ~~~d~e~lp-~~~~sfD~V~s~~~l~~-------------------------~~~-----~~~L~ei~RvLKPGG~l~i~ 89 (271)
.++|.-..+ +....||+|+++-.+.. ++. -.+++.+.+.|||||++.+.
T Consensus 315 ~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiV 394 (544)
T 3khk_A 315 KNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALL 394 (544)
T ss_dssp SSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEE
T ss_pred eccchhcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEEE
Confidence 556644333 56789999999643321 111 26899999999999999888
Q ss_pred ecCCCCcccHHHHHHHHHHHHHHcCCcc
Q 024162 90 KKLTSDKGDVDKAISALEGKLLLAGFLD 117 (271)
Q Consensus 90 ~~~~~~~~e~~~~~~~l~~~l~laGF~~ 117 (271)
.+.. .+.........+++.+...+.+.
T Consensus 395 lP~g-~L~~~~~~~~~iRk~Lle~~~l~ 421 (544)
T 3khk_A 395 LANG-SMSSNTNNEGEIRKTLVEQDLVE 421 (544)
T ss_dssp EETH-HHHCCGGGHHHHHHHHHHTTCEE
T ss_pred ecch-hhhcCcchHHHHHHHHHhCCcHh
Confidence 7541 10000011235666777776653
No 282
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=69.58 E-value=6.4 Score=35.00 Aligned_cols=56 Identities=16% Similarity=0.116 Sum_probs=37.6
Q ss_pred CeEEEeccCCCCCCCCCceeEEEeccccc----cCCh---HHHHHHHHHhccCC--cEEEEEecC
Q 024162 37 QIITQASSLSQLPVESFSIDTVLSISSSH----ELPG---DQLLEEISRVLKPG--GTILIYKKL 92 (271)
Q Consensus 37 ~v~~~~~d~e~lp~~~~sfD~V~s~~~l~----~~~~---~~~L~ei~RvLKPG--G~l~i~~~~ 92 (271)
++.+...+++-..++...+|+|+|-.+.+ ++.. -.+|.-+.++|+|| |.|++..+.
T Consensus 139 ~ii~~~~~~dv~~l~~~~~DvVLSDmApnsG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~ 203 (282)
T 3gcz_A 139 NLIRFKDKTDVFNMEVIPGDTLLCDIGESSPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLC 203 (282)
T ss_dssp GGEEEECSCCGGGSCCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESC
T ss_pred ceEEeeCCcchhhcCCCCcCEEEecCccCCCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEec
Confidence 34444444444456778999999965544 2211 13466667999999 999999876
No 283
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=68.29 E-value=18 Score=31.55 Aligned_cols=77 Identities=10% Similarity=0.017 Sum_probs=45.6
Q ss_pred ccEEEEecCC--cccHHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCC---CCCceeEEEeccccc-cCChHHHHHHH
Q 024162 3 SAVLALSEDK--ILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPV---ESFSIDTVLSISSSH-ELPGDQLLEEI 76 (271)
Q Consensus 3 ~~vl~~td~~--~~~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~---~~~sfD~V~s~~~l~-~~~~~~~L~ei 76 (271)
..||++ +++ ......+.++.++.. ..|.++. .+.++. .-+.||+|+...... .+ ++..++.+
T Consensus 5 ~~vLiV-~g~~~~~~a~~l~~aL~~~g--------~~V~~i~--~~~~~~~~~~L~~yDvIIl~d~~~~~l-~~~~~~~L 72 (259)
T 3rht_A 5 TRVLYC-GDTSLETAAGYLAGLMTSWQ--------WEFDYIP--SHVGLDVGELLAKQDLVILSDYPAERM-TAQAIDQL 72 (259)
T ss_dssp -CEEEE-ESSCTTTTHHHHHHHHHHTT--------CCCEEEC--TTSCBCSSHHHHTCSEEEEESCCGGGB-CHHHHHHH
T ss_pred ceEEEE-CCCCchhHHHHHHHHHHhCC--------ceEEEec--ccccccChhHHhcCCEEEEcCCccccC-CHHHHHHH
Confidence 468888 444 334666777777654 3455533 334432 225899998764332 33 34556666
Q ss_pred HHhccCCcEEEEEec
Q 024162 77 SRVLKPGGTILIYKK 91 (271)
Q Consensus 77 ~RvLKPGG~l~i~~~ 91 (271)
.+-.+-||-|++.-.
T Consensus 73 ~~yV~~GGgLi~~gG 87 (259)
T 3rht_A 73 VTMVKAGCGLVMLGG 87 (259)
T ss_dssp HHHHHTTCEEEEECS
T ss_pred HHHHHhCCeEEEecC
Confidence 666777999988753
No 284
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=68.23 E-value=5.3 Score=35.34 Aligned_cols=56 Identities=11% Similarity=0.067 Sum_probs=41.3
Q ss_pred CCeEEEeccCC-CCC-CCCCceeEEEeccccccCChHHHHHHHHHhccCCcEEEEEecC
Q 024162 36 PQIITQASSLS-QLP-VESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYKKL 92 (271)
Q Consensus 36 ~~v~~~~~d~e-~lp-~~~~sfD~V~s~~~l~~~~~~~~L~ei~RvLKPGG~l~i~~~~ 92 (271)
.+|.++.|++. .+| ++...||+|+.=... +-+....|..+++.|+|||.+++-+..
T Consensus 189 ~~I~li~Gda~etL~~~~~~~~d~vfIDaD~-y~~~~~~Le~~~p~L~pGGiIv~DD~~ 246 (282)
T 2wk1_A 189 EQVRFLPGWFKDTLPTAPIDTLAVLRMDGDL-YESTWDTLTNLYPKVSVGGYVIVDDYM 246 (282)
T ss_dssp TTEEEEESCHHHHSTTCCCCCEEEEEECCCS-HHHHHHHHHHHGGGEEEEEEEEESSCT
T ss_pred CceEEEEeCHHHHHhhCCCCCEEEEEEcCCc-cccHHHHHHHHHhhcCCCEEEEEcCCC
Confidence 56899999885 344 446789999984431 112267899999999999999887763
No 285
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=67.92 E-value=22 Score=32.77 Aligned_cols=82 Identities=11% Similarity=-0.046 Sum_probs=49.7
Q ss_pred CCeEEEeccCCCCCCCCCceeEEEeccccccCChHHHHHHHHHhccCCcEEEEEecC-CCCcccHHHHHHHHHHHHHHcC
Q 024162 36 PQIITQASSLSQLPVESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYKKL-TSDKGDVDKAISALEGKLLLAG 114 (271)
Q Consensus 36 ~~v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~~~~~L~ei~RvLKPGG~l~i~~~~-~~~~~e~~~~~~~l~~~l~laG 114 (271)
++|.++++|+..+..+...||+|+|=++.+.......+..+..-+..++.++..... .....++....+.+...+..+|
T Consensus 252 ~~V~~~~~d~~~~~~~~~~~D~vvsDm~~~p~~~~~l~~~wl~~~~~~~aI~~lKL~mk~~~~~l~~~~~~i~~~l~~~g 331 (375)
T 4auk_A 252 GQVTWLREDGFKFRPTRSNISWMVCDMVEKPAKVAALMAQWLVNGWCRETIFNLKLPMKKRYEEVSHNLAYIQAQLDEHG 331 (375)
T ss_dssp TCEEEECSCTTTCCCCSSCEEEEEECCSSCHHHHHHHHHHHHHTTSCSEEEEEEECCSSSHHHHHHHHHHHHHHHHHHTT
T ss_pred CCeEEEeCccccccCCCCCcCEEEEcCCCChHHhHHHHHHHHhccccceEEEEEEecccchHHHHHHHHHHHHHHHHhcC
Confidence 578999999988887788999999966543221133444444444444555444332 2122334445566677788888
Q ss_pred Ccc
Q 024162 115 FLD 117 (271)
Q Consensus 115 F~~ 117 (271)
|..
T Consensus 332 ~~~ 334 (375)
T 4auk_A 332 INA 334 (375)
T ss_dssp CCE
T ss_pred cch
Confidence 863
No 286
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=67.06 E-value=22 Score=31.23 Aligned_cols=52 Identities=19% Similarity=0.069 Sum_probs=33.7
Q ss_pred EEEec-cCCCCCCCCCceeEEEeccccc---cCCh-H---HHHHHHHHhccCCc-EEEEEecC
Q 024162 39 ITQAS-SLSQLPVESFSIDTVLSISSSH---ELPG-D---QLLEEISRVLKPGG-TILIYKKL 92 (271)
Q Consensus 39 ~~~~~-d~e~lp~~~~sfD~V~s~~~l~---~~~~-~---~~L~ei~RvLKPGG-~l~i~~~~ 92 (271)
.+.++ |+..+ +...||+|+|=.+.. ..-+ . .+|.-..++|+||| .|++..+.
T Consensus 125 ~~~~G~Df~~~--~~~~~DvVLSDMAPnSG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFq 185 (269)
T 2px2_A 125 TMKSGVDVFYK--PSEISDTLLCDIGESSPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILC 185 (269)
T ss_dssp EEECSCCGGGS--CCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred EeeccCCccCC--CCCCCCEEEeCCCCCCCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECC
Confidence 44446 77664 355799999944322 1112 1 24544558999999 99998887
No 287
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=66.18 E-value=8.3 Score=34.56 Aligned_cols=40 Identities=20% Similarity=0.174 Sum_probs=29.2
Q ss_pred CceeEEEeccc----ccc-C--Ch-----HHHHHHHHHhccCCcEEEEEecC
Q 024162 53 FSIDTVLSISS----SHE-L--PG-----DQLLEEISRVLKPGGTILIYKKL 92 (271)
Q Consensus 53 ~sfD~V~s~~~----l~~-~--~~-----~~~L~ei~RvLKPGG~l~i~~~~ 92 (271)
+.||+|++.+. .|+ - .| .-++.-..++|+|||.|++..+.
T Consensus 205 ~k~DvV~SDMApn~sGh~yqQC~DHarii~Lal~fA~~vLkPGGtfV~Kvyg 256 (320)
T 2hwk_A 205 PKYDIIFVNVRTPYKYHHYQQCEDHAIKLSMLTKKACLHLNPGGTCVSIGYG 256 (320)
T ss_dssp CCEEEEEEECCCCCCSCHHHHHHHHHHHHHHTHHHHGGGEEEEEEEEEEECC
T ss_pred CcCCEEEEcCCCCCCCccccccchHHHHHHHHHHHHHHhcCCCceEEEEEec
Confidence 66999999543 343 2 22 23566678999999999999987
No 288
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=65.20 E-value=5.2 Score=39.19 Aligned_cols=70 Identities=17% Similarity=0.283 Sum_probs=45.8
Q ss_pred CeEEEeccCCC-CC-C--C-CCceeEEEe-ccccccCC---hHHHHHHHHHhccCCcEEEEEecCCCCcccHHHHHHHHH
Q 024162 37 QIITQASSLSQ-LP-V--E-SFSIDTVLS-ISSSHELP---GDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALE 107 (271)
Q Consensus 37 ~v~~~~~d~e~-lp-~--~-~~sfD~V~s-~~~l~~~~---~~~~L~ei~RvLKPGG~l~i~~~~~~~~~e~~~~~~~l~ 107 (271)
.+....+|+.. ++ + . ...||+|+. -++...-+ ...++++++|+++|||++...... ..++
T Consensus 157 ~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~~~-----------~~vr 225 (676)
T 3ps9_A 157 TLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFTSA-----------GFVR 225 (676)
T ss_dssp EEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEEEEEEEEESCCC-----------HHHH
T ss_pred EEEEecCCHHHHHHhcccccCCcccEEEECCCCCcCChhhhhHHHHHHHHHHhCCCCEEEeccCc-----------HHHH
Confidence 34455566542 22 1 1 467999997 33222222 378999999999999998754432 1567
Q ss_pred HHHHHcCCcc
Q 024162 108 GKLLLAGFLD 117 (271)
Q Consensus 108 ~~l~laGF~~ 117 (271)
+.|..+||..
T Consensus 226 ~~L~~aGf~v 235 (676)
T 3ps9_A 226 RGLQDAGFTM 235 (676)
T ss_dssp HHHHHHTCEE
T ss_pred HHHHhCCeEE
Confidence 7888999964
No 289
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=62.25 E-value=5.1 Score=37.12 Aligned_cols=77 Identities=13% Similarity=0.059 Sum_probs=46.6
Q ss_pred HHHHHHHHHHhCchhh-h----cCCCCeEEEeccCCCC----CCCCCceeEEEeccc-------ccc----CChHHHHHH
Q 024162 16 VSAVLNAIRDLGDEAV-E----QCDPQIITQASSLSQL----PVESFSIDTVLSISS-------SHE----LPGDQLLEE 75 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~-~----~~~~~v~~~~~d~e~l----p~~~~sfD~V~s~~~-------l~~----~~~~~~L~e 75 (271)
.+.+++++|+....-. . ....++..+.+|+... .-..+.||+|+.=.. ... +-..++++.
T Consensus 237 Dp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~ 316 (381)
T 3c6k_A 237 DQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDL 316 (381)
T ss_dssp CHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHH
T ss_pred CHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccCceeEEEECCCCCcccCcccCcchHHHHHHHHHH
Confidence 5678899998631100 0 1123467777776432 113468999997321 011 112678899
Q ss_pred HHHhccCCcEEEEEecC
Q 024162 76 ISRVLKPGGTILIYKKL 92 (271)
Q Consensus 76 i~RvLKPGG~l~i~~~~ 92 (271)
+.++|+|||.++.+...
T Consensus 317 ~~~~L~p~GVlv~Q~~s 333 (381)
T 3c6k_A 317 SMKVLKQDGKYFTQGNC 333 (381)
T ss_dssp HHHTEEEEEEEEEEEEE
T ss_pred HHHhcCCCCEEEEecCC
Confidence 99999999999887543
No 290
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=58.27 E-value=16 Score=32.69 Aligned_cols=54 Identities=13% Similarity=0.072 Sum_probs=35.7
Q ss_pred eEEEeccCCCCCCCCCceeEEEeccccccCC----h----HHHHHHHHHhccCC-cEEEEEecC
Q 024162 38 IITQASSLSQLPVESFSIDTVLSISSSHELP----G----DQLLEEISRVLKPG-GTILIYKKL 92 (271)
Q Consensus 38 v~~~~~d~e~lp~~~~sfD~V~s~~~l~~~~----~----~~~L~ei~RvLKPG-G~l~i~~~~ 92 (271)
+......++-..+....||+|++-.+.+ .. + ..+|.-+.++|+|| |.|++..+.
T Consensus 131 iv~~~~~~di~~l~~~~~DlVlsD~APn-sG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~ 193 (300)
T 3eld_A 131 IVKFKDKSNVFTMPTEPSDTLLCDIGES-SSNPLVERDRTMKVLENFERWKHVNTENFCVKVLA 193 (300)
T ss_dssp GEEEECSCCTTTSCCCCCSEEEECCCCC-CSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESS
T ss_pred eEEeecCceeeecCCCCcCEEeecCcCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecc
Confidence 3334444444456678999999955444 21 1 23456567999999 999999876
No 291
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=58.00 E-value=26 Score=33.75 Aligned_cols=79 Identities=20% Similarity=0.097 Sum_probs=49.8
Q ss_pred CeEEEeccCCCC--C-CCCCceeEEEecccc--cc-----------------CC-----hHHHHHHHHHhcc-CCcEEEE
Q 024162 37 QIITQASSLSQL--P-VESFSIDTVLSISSS--HE-----------------LP-----GDQLLEEISRVLK-PGGTILI 88 (271)
Q Consensus 37 ~v~~~~~d~e~l--p-~~~~sfD~V~s~~~l--~~-----------------~~-----~~~~L~ei~RvLK-PGG~l~i 88 (271)
.+.+.++|.-.. | +....||+|+++-.+ .| ++ +-.++..+.+.|| |||++.+
T Consensus 277 ~~~I~~gDtL~~d~p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~ 356 (542)
T 3lkd_A 277 NQFLHNADTLDEDWPTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAI 356 (542)
T ss_dssp GEEEEESCTTTSCSCCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEE
T ss_pred ccceEecceecccccccccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEE
Confidence 456777876655 4 457789999986321 11 11 1348999999999 9999988
Q ss_pred EecCCCCcccHHHHHHHHHHHHHHcCCcc
Q 024162 89 YKKLTSDKGDVDKAISALEGKLLLAGFLD 117 (271)
Q Consensus 89 ~~~~~~~~~e~~~~~~~l~~~l~laGF~~ 117 (271)
..+.. .+.. ......+++.+...+.+.
T Consensus 357 VlP~g-~Lf~-~~~~~~iRk~Lle~~~l~ 383 (542)
T 3lkd_A 357 VLPHG-VLFR-GNAEGTIRKALLEEGAID 383 (542)
T ss_dssp EEETH-HHHC-CTHHHHHHHHHHHTTCEE
T ss_pred Eecch-HhhC-CchhHHHHHHHHhCCcee
Confidence 87652 1100 012235667777776654
No 292
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=57.32 E-value=9.5 Score=37.47 Aligned_cols=71 Identities=21% Similarity=0.327 Sum_probs=47.4
Q ss_pred CCeEEEeccCC-CCC-CC---CCceeEEEe-ccccccCC---hHHHHHHHHHhccCCcEEEEEecCCCCcccHHHHHHHH
Q 024162 36 PQIITQASSLS-QLP-VE---SFSIDTVLS-ISSSHELP---GDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISAL 106 (271)
Q Consensus 36 ~~v~~~~~d~e-~lp-~~---~~sfD~V~s-~~~l~~~~---~~~~L~ei~RvLKPGG~l~i~~~~~~~~~e~~~~~~~l 106 (271)
..+..+.+|+. .++ +. ...||+|+. -++...-+ ...++.+++|+++|||++...... ..+
T Consensus 148 ~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~~~-----------~~v 216 (689)
T 3pvc_A 148 ITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFSTFTAA-----------GFV 216 (689)
T ss_dssp EEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEEESCCC-----------HHH
T ss_pred EEEEEEccCHHHHHhhcccccCCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEEeccCc-----------HHH
Confidence 34556777774 233 22 468999997 33322222 388999999999999998754432 156
Q ss_pred HHHHHHcCCcc
Q 024162 107 EGKLLLAGFLD 117 (271)
Q Consensus 107 ~~~l~laGF~~ 117 (271)
++.|..+||..
T Consensus 217 r~~l~~aGf~~ 227 (689)
T 3pvc_A 217 RRGLQQAGFNV 227 (689)
T ss_dssp HHHHHHTTCEE
T ss_pred HHHHHhCCeEE
Confidence 77889999964
No 293
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=56.57 E-value=14 Score=33.42 Aligned_cols=54 Identities=19% Similarity=0.083 Sum_probs=36.1
Q ss_pred EEEeccCCCCCCCCCceeEEEecccc----c-------cCCh-HHHHHHHHHhccCCcEEEEEecCC
Q 024162 39 ITQASSLSQLPVESFSIDTVLSISSS----H-------ELPG-DQLLEEISRVLKPGGTILIYKKLT 93 (271)
Q Consensus 39 ~~~~~d~e~lp~~~~sfD~V~s~~~l----~-------~~~~-~~~L~ei~RvLKPGG~l~i~~~~~ 93 (271)
.++++|...+.. ...||+|+|=++. + ...- +.++.=+.++|+|||.|++..+.-
T Consensus 155 ~~IqGD~~~~~~-~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQG 220 (344)
T 3r24_A 155 STLIGDCATVHT-ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEH 220 (344)
T ss_dssp EEEESCGGGEEE-SSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSS
T ss_pred eEEEcccccccc-CCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecC
Confidence 347888655433 4789999993321 1 1111 556666778999999999998763
No 294
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=48.51 E-value=16 Score=31.79 Aligned_cols=45 Identities=7% Similarity=-0.084 Sum_probs=33.8
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCC-ceeEEEecccccc
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESF-SIDTVLSISSSHE 66 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~-sfD~V~s~~~l~~ 66 (271)
++.|++.++++.. ..++.++++|+..+++++. .||.|+++..++.
T Consensus 77 d~~~~~~l~~~~~------~~~v~vi~~D~l~~~~~~~~~~~~iv~NlPy~i 122 (271)
T 3fut_A 77 DLRLRPVLEETLS------GLPVRLVFQDALLYPWEEVPQGSLLVANLPYHI 122 (271)
T ss_dssp CGGGHHHHHHHTT------TSSEEEEESCGGGSCGGGSCTTEEEEEEECSSC
T ss_pred CHHHHHHHHHhcC------CCCEEEEECChhhCChhhccCccEEEecCcccc
Confidence 5678888887752 1468999999999988753 6899998765443
No 295
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=48.48 E-value=13 Score=32.34 Aligned_cols=56 Identities=14% Similarity=0.108 Sum_probs=41.8
Q ss_pred CCeEEEeccCCC-CC-----CCCCceeEEEeccccccCChHHHHHHHHHhccCCcEEEEEecC
Q 024162 36 PQIITQASSLSQ-LP-----VESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYKKL 92 (271)
Q Consensus 36 ~~v~~~~~d~e~-lp-----~~~~sfD~V~s~~~l~~~~~~~~L~ei~RvLKPGG~l~i~~~~ 92 (271)
.+|.++.|++.+ +| .+...||+|+.=.- .+-+....+..++..|+|||.+++-+..
T Consensus 158 ~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D-~Y~~t~~~le~~~p~l~~GGvIv~DD~~ 219 (257)
T 3tos_A 158 QRSVLVEGDVRETVPRYLAENPQTVIALAYFDLD-LYEPTKAVLEAIRPYLTKGSIVAFDELD 219 (257)
T ss_dssp CSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCC-CHHHHHHHHHHHGGGEEEEEEEEESSTT
T ss_pred CcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCc-ccchHHHHHHHHHHHhCCCcEEEEcCCC
Confidence 679999998864 33 24567999988442 1222367899999999999999998874
No 296
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=44.74 E-value=11 Score=33.46 Aligned_cols=23 Identities=30% Similarity=0.626 Sum_probs=21.5
Q ss_pred HHHHHHHHHhccCCcEEEEEecC
Q 024162 70 DQLLEEISRVLKPGGTILIYKKL 92 (271)
Q Consensus 70 ~~~L~ei~RvLKPGG~l~i~~~~ 92 (271)
..+|....++|+|||+|.+..++
T Consensus 213 ~~~L~~a~~~L~~gGrl~visfH 235 (285)
T 1wg8_A 213 KEFLEQAAEVLAPGGRLVVIAFH 235 (285)
T ss_dssp HHHHHHHHHHEEEEEEEEEEECS
T ss_pred HHHHHHHHHHhcCCCEEEEEecC
Confidence 78899999999999999999987
No 297
>2k4x_A 30S ribosomal protein S27AE; metal-binding, ribonucleoprotein, zinc, zinc-finger, structural genomics, PSI-2; NMR {Thermoplasma acidophilum} SCOP: g.41.8.8
Probab=44.70 E-value=9.4 Score=25.31 Aligned_cols=19 Identities=42% Similarity=1.011 Sum_probs=14.5
Q ss_pred CCccccCCCCCCCCCCCCCCCe
Q 024162 238 GDAFRCGTCPYKGLPPFKLGEK 259 (271)
Q Consensus 238 gdafrc~~cpy~g~pafkpGe~ 259 (271)
+|.|.|..|+|- -|+-++|
T Consensus 34 ~dr~~C~kCgyt---~~~~~~~ 52 (55)
T 2k4x_A 34 ADRYSCGRCGYT---EFKKAKK 52 (55)
T ss_dssp SSEEECTTTCCC---EECCCCC
T ss_pred CCEEECCCCCCE---EEeCccc
Confidence 589999999997 3665554
No 298
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=44.37 E-value=25 Score=31.25 Aligned_cols=44 Identities=30% Similarity=0.308 Sum_probs=30.3
Q ss_pred CCCCCceeEEEeccc----cccCCh--------HHHHHHHHHhccCCcEEEEEecC
Q 024162 49 PVESFSIDTVLSISS----SHELPG--------DQLLEEISRVLKPGGTILIYKKL 92 (271)
Q Consensus 49 p~~~~sfD~V~s~~~----l~~~~~--------~~~L~ei~RvLKPGG~l~i~~~~ 92 (271)
|-.-+.||+|+.+.. .||... .-+-....+.|+|||.+++.-.+
T Consensus 206 P~~~grYDlVfvNv~TpyR~HHYQQCeDHA~~l~mL~~~al~~L~pGGtlv~~aYG 261 (324)
T 3trk_A 206 PATLGRYDLVVINIHTPFRIHHYQQCVDHAMKLQMLGGDSLRLLKPGGSLLIRAYG 261 (324)
T ss_dssp CGGGCCEEEEEEECCCCCCSSHHHHHHHHHHHHHHHHHHGGGGEEEEEEEEEEECC
T ss_pred CCcCCceeEEEEecCCccccchHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEeec
Confidence 444479999998542 344332 22344567899999999999876
No 299
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=41.91 E-value=13 Score=33.99 Aligned_cols=23 Identities=35% Similarity=0.472 Sum_probs=21.4
Q ss_pred HHHHHHHHHhccCCcEEEEEecC
Q 024162 70 DQLLEEISRVLKPGGTILIYKKL 92 (271)
Q Consensus 70 ~~~L~ei~RvLKPGG~l~i~~~~ 92 (271)
..+|..+.++|+|||+|.+..+.
T Consensus 254 ~~~L~~a~~~L~~gGRl~VISFH 276 (347)
T 3tka_A 254 EQALKSSLNVLAPGGRLSIISFH 276 (347)
T ss_dssp HHHHHHHHHHEEEEEEEEEEESS
T ss_pred HHHHHHHHHHhCCCCEEEEEecC
Confidence 77899999999999999999987
No 300
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=41.69 E-value=20 Score=30.85 Aligned_cols=43 Identities=9% Similarity=0.040 Sum_probs=31.3
Q ss_pred cHHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCC----CceeEEEeccc
Q 024162 15 PVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVES----FSIDTVLSISS 63 (271)
Q Consensus 15 ~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~----~sfD~V~s~~~ 63 (271)
-++.|++.++++... ..++.++++|+..+++++ ..|| |+++..
T Consensus 59 id~~~~~~~~~~~~~-----~~~v~~i~~D~~~~~~~~~~~~~~~~-vv~NlP 105 (255)
T 3tqs_A 59 IDRDLVAFLQKKYNQ-----QKNITIYQNDALQFDFSSVKTDKPLR-VVGNLP 105 (255)
T ss_dssp CCHHHHHHHHHHHTT-----CTTEEEEESCTTTCCGGGSCCSSCEE-EEEECC
T ss_pred CCHHHHHHHHHHHhh-----CCCcEEEEcchHhCCHHHhccCCCeE-EEecCC
Confidence 367889999887522 257899999999998754 4688 666543
No 301
>3ny7_A YCHM protein, sulfate transporter; fatty acid biosynthesis(FAB), bicarbonate transport, anion T membrane protein, STAS domain, SLC26; HET: SXM; 1.92A {Escherichia coli}
Probab=40.50 E-value=55 Score=24.12 Aligned_cols=51 Identities=12% Similarity=0.081 Sum_probs=34.6
Q ss_pred EEEeccccccCCh--HHHHHHHHHhccCCcEEEEEecCCCCcccHHHHHHHHHHHHHHcCCcch
Q 024162 57 TVLSISSSHELPG--DQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDA 118 (271)
Q Consensus 57 ~V~s~~~l~~~~~--~~~L~ei~RvLKPGG~l~i~~~~~~~~~e~~~~~~~l~~~l~laGF~~v 118 (271)
+|+-.....++.. -.+|.++++-++.|+.+++..... .+.+.+..+||...
T Consensus 49 vilDl~~v~~iDssgl~~L~~~~~~~~~g~~l~l~~~~~-----------~v~~~l~~~gl~~~ 101 (118)
T 3ny7_A 49 VILKWDAVPVLDAGGLDAFQRFVKRLPEGCELRVCNVEF-----------QPLRTMARAGIQPI 101 (118)
T ss_dssp EEEEEEECCCBCHHHHHHHHHHHHHCCTTCEEEEECCCH-----------HHHHHHHHTTCCCB
T ss_pred EEEEcCCCCeecHHHHHHHHHHHHHHHCCCEEEEecCCH-----------HHHHHHHHcCChhh
Confidence 4444444555654 667788888876688888887651 45667888998753
No 302
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=36.54 E-value=1.7e+02 Score=25.27 Aligned_cols=86 Identities=9% Similarity=0.089 Sum_probs=45.5
Q ss_pred ccEEEEecCCcccHHHHHHHHHHhCchhhhcCCCCeEEEecc-----CCCCCCCCCceeEEEeccccccCChHHHHHHHH
Q 024162 3 SAVLALSEDKILPVSAVLNAIRDLGDEAVEQCDPQIITQASS-----LSQLPVESFSIDTVLSISSSHELPGDQLLEEIS 77 (271)
Q Consensus 3 ~~vl~~td~~~~~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d-----~e~lp~~~~sfD~V~s~~~l~~~~~~~~L~ei~ 77 (271)
-.||+++-...........++++.... .....|.+.... .+.+.-.-..||+|+.......+ +....+.+.
T Consensus 5 ~kvLiv~G~~~H~~~~~~~~l~~~l~~---~g~f~V~~~~d~~~~~d~~~f~~~L~~~D~vV~~~~~~~l-~~~~~~~l~ 80 (281)
T 4e5v_A 5 IKTLLITGQNNHNWQVSHVVLKQILEN---SGRFDVDFVISPEQGKDMSGFVLDFSPYQLVVLDYNGDSW-PEETNRRFL 80 (281)
T ss_dssp EEEEEEESCCSSCHHHHHHHHHHHHHH---TTSEEEEEEECCCTTSCCTTCCCCCTTCSEEEECCCSSCC-CHHHHHHHH
T ss_pred eEEEEEcCCCCCChHHHHHHHHHHHHh---cCCEEEEEEeCCccccchhHHhhhhhcCCEEEEeCCCCcC-CHHHHHHHH
Confidence 357888665555556555555554211 011233333211 12111123579999954422222 356677788
Q ss_pred HhccCCcEEEEEecC
Q 024162 78 RVLKPGGTILIYKKL 92 (271)
Q Consensus 78 RvLKPGG~l~i~~~~ 92 (271)
+.++-||-|+..-..
T Consensus 81 ~yV~~Ggglv~~H~a 95 (281)
T 4e5v_A 81 EYVQNGGGVVIYHAA 95 (281)
T ss_dssp HHHHTTCEEEEEGGG
T ss_pred HHHHcCCCEEEEecc
Confidence 888889888876543
No 303
>4gua_A Non-structural polyprotein; viral precursor polyprotein, protease, zinc-binding, hydrola; HET: MES; 2.85A {Sindbis virus}
Probab=35.90 E-value=29 Score=33.95 Aligned_cols=41 Identities=22% Similarity=0.286 Sum_probs=28.8
Q ss_pred CCceeEEEecc----ccccCCh--------HHHHHHHHHhccCCcEEEEEecC
Q 024162 52 SFSIDTVLSIS----SSHELPG--------DQLLEEISRVLKPGGTILIYKKL 92 (271)
Q Consensus 52 ~~sfD~V~s~~----~l~~~~~--------~~~L~ei~RvLKPGG~l~i~~~~ 92 (271)
.+.||+|+.+. -.||... .-+-....+.|+|||.+++.-.+
T Consensus 219 ~~ryDlvfvn~~t~yr~HHyqQCeDHa~~l~ml~~~al~~l~pGGt~v~~~YG 271 (670)
T 4gua_A 219 QARYDLVFINIGTKYRNHHFQQCEDHAATLKTLSRSALNCLNPGGTLVVKSYG 271 (670)
T ss_dssp CCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESC
T ss_pred CCcccEEEEecCCCcccchHHHHHHHHHHHHHHhHHHHhhcCCCceEEEEEee
Confidence 46999999854 2344432 22345577899999999998765
No 304
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=35.18 E-value=16 Score=32.37 Aligned_cols=23 Identities=26% Similarity=0.580 Sum_probs=19.7
Q ss_pred HHHHHHHHHhccCCcEEEEEecC
Q 024162 70 DQLLEEISRVLKPGGTILIYKKL 92 (271)
Q Consensus 70 ~~~L~ei~RvLKPGG~l~i~~~~ 92 (271)
+.+|....++|+|||+|.+..++
T Consensus 225 ~~~l~~~~~~l~~ggr~~visfh 247 (301)
T 1m6y_A 225 KEFLKKAEDLLNPGGRIVVISFH 247 (301)
T ss_dssp HHHHHHGGGGEEEEEEEEEEESS
T ss_pred HHHHHHHHHhhCCCCEEEEEecC
Confidence 45677788899999999999987
No 305
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=32.86 E-value=4.4 Score=35.06 Aligned_cols=63 Identities=8% Similarity=-0.062 Sum_probs=31.3
Q ss_pred HHHHHHHHhCchhhhcCCCCeEEEeccCCCC-C-CCC--CceeEEEeccccccCChHHHHHHHHHhccC
Q 024162 18 AVLNAIRDLGDEAVEQCDPQIITQASSLSQL-P-VES--FSIDTVLSISSSHELPGDQLLEEISRVLKP 82 (271)
Q Consensus 18 ~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~l-p-~~~--~sfD~V~s~~~l~~~~~~~~L~ei~RvLKP 82 (271)
.+++.+++..... ....+|.+++++++++ + +++ ++||+|++.-.+++......+++..++|++
T Consensus 123 ~~l~~a~~n~~~~--~~~~ri~~~~~d~~~~l~~~~~~~~~fD~V~~dP~~~~~~~sa~vkk~~~~l~~ 189 (258)
T 2r6z_A 123 DGIRRALLNPETQ--DTAARINLHFGNAAEQMPALVKTQGKPDIVYLDPMYPERRKSAAVKKEMAYFHR 189 (258)
T ss_dssp HHHHHHHHSHHHH--HHHTTEEEEESCHHHHHHHHHHHHCCCSEEEECCCC-------------HHHHH
T ss_pred HHHHHHHhHHHhh--CCccCeEEEECCHHHHHHhhhccCCCccEEEECCCCCCcccchHHHHHHHHhhh
Confidence 6777776643111 0113489999998874 3 444 789999996555442222233344444444
No 306
>2l55_A SILB,silver efflux protein, MFP component of the components proton antiporter metal...; APO form, AG(I)-binding site; NMR {Cupriavidus metallidurans}
Probab=32.13 E-value=26 Score=25.00 Aligned_cols=14 Identities=29% Similarity=0.425 Sum_probs=10.3
Q ss_pred CCCCCCCCeEEecC
Q 024162 251 LPPFKLGEKVSLSS 264 (271)
Q Consensus 251 ~pafkpGe~v~l~~ 264 (271)
+-.||+|++|.+.-
T Consensus 45 l~~lk~Gd~V~F~~ 58 (82)
T 2l55_A 45 PQGLKAGDRVAFSF 58 (82)
T ss_dssp CSSCSTTCEEEEEE
T ss_pred hhcCCCCCEEEEEE
Confidence 34589999998753
No 307
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=30.44 E-value=26 Score=30.00 Aligned_cols=45 Identities=4% Similarity=-0.072 Sum_probs=31.6
Q ss_pred cHHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCCCCCC-----ceeEEEecccc
Q 024162 15 PVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESF-----SIDTVLSISSS 64 (271)
Q Consensus 15 ~s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp~~~~-----sfD~V~s~~~l 64 (271)
-++.|++.++++... ..++.++++|+..+++++. ..+.|+++..+
T Consensus 51 id~~~~~~a~~~~~~-----~~~v~~i~~D~~~~~~~~~~~~~~~~~~vvsNlPY 100 (252)
T 1qyr_A 51 LDRDLAARLQTHPFL-----GPKLTIYQQDAMTFNFGELAEKMGQPLRVFGNLPY 100 (252)
T ss_dssp CCHHHHHHHHTCTTT-----GGGEEEECSCGGGCCHHHHHHHHTSCEEEEEECCT
T ss_pred CCHHHHHHHHHHhcc-----CCceEEEECchhhCCHHHhhcccCCceEEEECCCC
Confidence 367899999887522 1468999999999887532 34677776543
No 308
>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...
Probab=29.07 E-value=63 Score=22.35 Aligned_cols=35 Identities=26% Similarity=0.464 Sum_probs=23.5
Q ss_pred CCCCCCCCCC------CCccccCCCCCCCCCCCCCCCeEEe
Q 024162 228 PQSACGSCGL------GDAFRCGTCPYKGLPPFKLGEKVSL 262 (271)
Q Consensus 228 ~~s~cg~c~l------gdafrc~~cpy~g~pafkpGe~v~l 262 (271)
..--|+.|.+ +|+-||-.|=|+=|.--.|-.-|++
T Consensus 27 v~Y~C~~CG~~~e~~~~d~irCp~CG~RILyK~R~~r~v~~ 67 (70)
T 1twf_L 27 LKYICAECSSKLSLSRTDAVRCKDCGHRILLKARTKRLVQF 67 (70)
T ss_dssp CCEECSSSCCEECCCTTSTTCCSSSCCCCCBCCCCSSCEEE
T ss_pred EEEECCCCCCcceeCCCCCccCCCCCceEeEecCCCccEEE
Confidence 3456888875 7999999999965554444334443
No 309
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=28.98 E-value=59 Score=33.25 Aligned_cols=22 Identities=18% Similarity=0.250 Sum_probs=19.1
Q ss_pred HHHHHHHHhccCCcEEEEEecC
Q 024162 71 QLLEEISRVLKPGGTILIYKKL 92 (271)
Q Consensus 71 ~~L~ei~RvLKPGG~l~i~~~~ 92 (271)
.++..+.+.|+|||++.+..+.
T Consensus 446 aFIe~Al~lLKpGGrLAfIlP~ 467 (878)
T 3s1s_A 446 LFLELVTELVQDGTVISAIMPK 467 (878)
T ss_dssp HHHHHHHHHSCTTCEEEEEEET
T ss_pred HHHHHHHHhcCCCcEEEEEECh
Confidence 4678899999999999998865
No 310
>3u28_C H/ACA ribonucleoprotein complex subunit 1; pseudouridine synthase, pseudouridylation, H/ACA RNA; 1.90A {Saccharomyces cerevisiae} PDB: 3uai_C
Probab=28.83 E-value=23 Score=27.11 Aligned_cols=21 Identities=29% Similarity=0.444 Sum_probs=14.3
Q ss_pred CCCCCCC--CCCCCeEEecCccc
Q 024162 247 PYKGLPP--FKLGEKVSLSSNFL 267 (271)
Q Consensus 247 py~g~pa--fkpGe~v~l~~~~l 267 (271)
|+-|+.| ||.|+|+-|+.+.|
T Consensus 84 ~~~gv~a~Sfk~gdk~YId~~kl 106 (114)
T 3u28_C 84 CGDGVQATSFKEGDKFYIAADKL 106 (114)
T ss_dssp ECTTCCGGGCCTTCEEEEEGGGE
T ss_pred ecCCCcccccccCCEEEECcccc
Confidence 4456666 78888887776654
No 311
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=28.55 E-value=17 Score=31.41 Aligned_cols=48 Identities=13% Similarity=-0.066 Sum_probs=30.0
Q ss_pred CeEEEeccCCC-CCCCCCceeEEEeccccccCChHHHHHHHHHhccCCc
Q 024162 37 QIITQASSLSQ-LPVESFSIDTVLSISSSHELPGDQLLEEISRVLKPGG 84 (271)
Q Consensus 37 ~v~~~~~d~e~-lp~~~~sfD~V~s~~~l~~~~~~~~L~ei~RvLKPGG 84 (271)
+++++++|+.+ ++.-...||+|+.--.+++-....++++..++|++.+
T Consensus 146 ~i~~~~~D~~~~L~~~~~~fDvV~lDP~y~~~~~saavkk~~~~lr~l~ 194 (258)
T 2oyr_A 146 RLQLIHASSLTALTDITPRPQVVYLDPMFPHKQKSALVKKEMRVFQSLV 194 (258)
T ss_dssp HEEEEESCHHHHSTTCSSCCSEEEECCCCCCCCC-----HHHHHHHHHS
T ss_pred CEEEEECCHHHHHHhCcccCCEEEEcCCCCCcccchHHHHHHHHHHHhh
Confidence 58899999875 3422347999999665544333567778888888766
No 312
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=27.83 E-value=40 Score=26.79 Aligned_cols=32 Identities=22% Similarity=0.497 Sum_probs=24.8
Q ss_pred CceeEEEeccccccCChHHHHHHHHHhccCCcEEEEEe
Q 024162 53 FSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYK 90 (271)
Q Consensus 53 ~sfD~V~s~~~l~~~~~~~~L~ei~RvLKPGG~l~i~~ 90 (271)
..+|+|+.... ...+.+..+.|+|||++++.-
T Consensus 106 ~~~D~vi~~~g------~~~~~~~~~~l~~~G~~v~~g 137 (198)
T 1pqw_A 106 YGVDVVLNSLA------GEAIQRGVQILAPGGRFIELG 137 (198)
T ss_dssp CCEEEEEECCC------THHHHHHHHTEEEEEEEEECS
T ss_pred CCCeEEEECCc------hHHHHHHHHHhccCCEEEEEc
Confidence 36999987542 256788999999999998764
No 313
>1wc2_A Endoglucanase; hydrolase, cellulase, cellulose, double-PSI fold, glycoside hydrolase; 1.2A {Mytilus edulis} SCOP: b.52.1.1
Probab=26.29 E-value=22 Score=29.43 Aligned_cols=32 Identities=19% Similarity=0.121 Sum_probs=20.8
Q ss_pred CCCCCCCC----CCccccCCCCCCCCCCCCCCCeEEecCccc
Q 024162 230 SACGSCGL----GDAFRCGTCPYKGLPPFKLGEKVSLSSNFL 267 (271)
Q Consensus 230 s~cg~c~l----gdafrc~~cpy~g~pafkpGe~v~l~~~~l 267 (271)
-+||.||- ||. |.+|++-+. +|.-|++..+.|
T Consensus 67 ~~CG~Cyel~c~~~~--c~~cg~~~~----~g~SI~VtaTN~ 102 (181)
T 1wc2_A 67 QHCGQCIKLTTTGGY--VPGQGGPVR----EGLSKTFMITNL 102 (181)
T ss_dssp TTTTCEEEEEEEEEE--CTTSCCCCC----TTCEEEEEEEEE
T ss_pred ccCCCcEEEEcCCCC--cccccccCC----CCCeEEEEEecC
Confidence 49999995 553 777765543 476677665443
No 314
>4fib_A Uncharacterized protein YDHK; structural genomics, PSI-biology, northeast structural genom consortium, NESG, SR518A, DUF1541, PF07563; 2.00A {Bacillus subtilis subsp} PDB: 2ky9_A
Probab=25.83 E-value=36 Score=26.52 Aligned_cols=17 Identities=24% Similarity=0.428 Sum_probs=14.0
Q ss_pred CCCCCCCCCeEEecCcc
Q 024162 250 GLPPFKLGEKVSLSSNF 266 (271)
Q Consensus 250 g~pafkpGe~v~l~~~~ 266 (271)
|-|+|++|.+|.|..+-
T Consensus 61 ~~~~~~~GseV~l~AdH 77 (129)
T 4fib_A 61 GDKTLQPGDQVILEASH 77 (129)
T ss_dssp TTCCCCTTCEEEBCCCS
T ss_pred CCCCCCCCCEEEEeccc
Confidence 57899999999987653
No 315
>3eqz_A Response regulator; structural genomics, unknown function, PSI-2, protein struct initiative; 2.15A {Colwellia psychrerythraea} SCOP: c.23.1.0
Probab=25.57 E-value=1.8e+02 Score=20.42 Aligned_cols=37 Identities=8% Similarity=0.218 Sum_probs=22.6
Q ss_pred eeEEEeccccccCChHHHHHHHHHhccCCcEEEEEecC
Q 024162 55 IDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYKKL 92 (271)
Q Consensus 55 fD~V~s~~~l~~~~~~~~L~ei~RvLKPGG~l~i~~~~ 92 (271)
+|+|+.-..+......++++++.+ ..|.-.+++....
T Consensus 47 ~dlvi~D~~l~~~~g~~~~~~l~~-~~~~~~ii~~s~~ 83 (135)
T 3eqz_A 47 QDIIILDLMMPDMDGIEVIRHLAE-HKSPASLILISGY 83 (135)
T ss_dssp TEEEEEECCTTTTHHHHHHHHHHH-TTCCCEEEEEESS
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHh-CCCCCCEEEEEec
Confidence 999998654443333566666665 3466666665543
No 316
>1gl0_I Protease inhibitor LCMI I; hydrolase/inhibitor, complex (protease/inhibitor), hydrolase, serine protease, serine protease inhibitor; 3.0A {Locusta migratoria} SCOP: g.4.1.1
Probab=24.65 E-value=19 Score=21.74 Aligned_cols=18 Identities=28% Similarity=0.959 Sum_probs=13.7
Q ss_pred CCCCCC-CcccCCCCCccc
Q 024162 190 GDCEVG-STRKACKNCICG 207 (271)
Q Consensus 190 ~~C~~~-~~~~ack~ctcg 207 (271)
..|.+| .++.-|-.|+|.
T Consensus 2 ~~C~PG~~~k~~CN~C~C~ 20 (35)
T 1gl0_I 2 EKCTPGQVKQQDCNTCTCT 20 (35)
T ss_dssp -CCCTTCEEECSSCEEEEC
T ss_pred CccCCCcccccCCCccCCC
Confidence 358877 667889999996
No 317
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=24.25 E-value=59 Score=29.51 Aligned_cols=42 Identities=17% Similarity=0.134 Sum_probs=30.2
Q ss_pred CCCceeEEEeccccccCC--hHHHHHHHHHhccCCcEEEEEecC
Q 024162 51 ESFSIDTVLSISSSHELP--GDQLLEEISRVLKPGGTILIYKKL 92 (271)
Q Consensus 51 ~~~sfD~V~s~~~l~~~~--~~~~L~ei~RvLKPGG~l~i~~~~ 92 (271)
....||+|+....-+--. -+..|.++.+.|+|||.+++.-..
T Consensus 98 ~~~~~d~v~~~~Pk~k~~~~~~~~l~~~~~~l~~g~~i~~~g~~ 141 (381)
T 3dmg_A 98 AAGAYDLVVLALPAGRGTAYVQASLVAAARALRMGGRLYLAGDK 141 (381)
T ss_dssp CTTCEEEEEEECCGGGCHHHHHHHHHHHHHHEEEEEEEEEEEEG
T ss_pred CcCCCCEEEEECCcchhHHHHHHHHHHHHHhCCCCCEEEEEEcc
Confidence 456899998755422111 267889999999999999887643
No 318
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=22.61 E-value=41 Score=29.67 Aligned_cols=43 Identities=16% Similarity=0.055 Sum_probs=31.0
Q ss_pred HHHHHHHHHHhCchhhhcCCCCeEEEeccCCCCC--CC---CCceeEEEecc
Q 024162 16 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLP--VE---SFSIDTVLSIS 62 (271)
Q Consensus 16 s~~mv~~ar~~~~~~~~~~~~~v~~~~~d~e~lp--~~---~~sfD~V~s~~ 62 (271)
++.|++.++++.... +.++.++++++..++ +. ..+||.|++..
T Consensus 59 d~~al~~A~~~~~~~----g~~v~~v~~d~~~l~~~l~~~g~~~~D~Vl~D~ 106 (301)
T 1m6y_A 59 DSEVLRIAEEKLKEF----SDRVSLFKVSYREADFLLKTLGIEKVDGILMDL 106 (301)
T ss_dssp CHHHHHHHHHHTGGG----TTTEEEEECCGGGHHHHHHHTTCSCEEEEEEEC
T ss_pred CHHHHHHHHHHHHhc----CCcEEEEECCHHHHHHHHHhcCCCCCCEEEEcC
Confidence 678888888875321 157899999998875 22 25899999743
No 319
>2jw6_A Deformed epidermal autoregulatory factor 1 homolo; zinc binding domain, transcription, alternative splicing, DI mutation, DNA-binding; NMR {Homo sapiens} SCOP: g.85.1.1
Probab=22.44 E-value=41 Score=21.19 Aligned_cols=20 Identities=25% Similarity=0.715 Sum_probs=14.2
Q ss_pred CCCCCCCCCCCCccccCCCC
Q 024162 228 PQSACGSCGLGDAFRCGTCP 247 (271)
Q Consensus 228 ~~s~cg~c~lgdafrc~~cp 247 (271)
....|.+|..---+||++|-
T Consensus 8 ~~~~C~~C~~~~~~~C~~C~ 27 (52)
T 2jw6_A 8 KEQSCVNCGREAMSECTGCH 27 (52)
T ss_dssp ---CCSSSSSSCSEECTTTC
T ss_pred cCCcCCCCCCCCcCcCCCCC
Confidence 35678888887788999884
No 320
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=22.20 E-value=3.9e+02 Score=23.26 Aligned_cols=57 Identities=19% Similarity=0.143 Sum_probs=40.2
Q ss_pred CCeEEEeccCCCCC---------CCCCceeEEEeccccccCCh---HHHHHHHHHhccCCcEEEEEecCC
Q 024162 36 PQIITQASSLSQLP---------VESFSIDTVLSISSSHELPG---DQLLEEISRVLKPGGTILIYKKLT 93 (271)
Q Consensus 36 ~~v~~~~~d~e~lp---------~~~~sfD~V~s~~~l~~~~~---~~~L~ei~RvLKPGG~l~i~~~~~ 93 (271)
.+..++.+|+.+ . |..+.-=++++..+++++++ ..+++.+...+.||+.|++.....
T Consensus 153 ~~~~~v~~Dl~d-~~~~~l~~~g~d~~~Pt~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~~~~ 221 (310)
T 2uyo_A 153 ADRREVPIDLRQ-DWPPALRSAGFDPSARTAWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVETSPL 221 (310)
T ss_dssp SEEEEEECCTTS-CHHHHHHHTTCCTTSCEEEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEECCCT
T ss_pred CCeEEEecchHh-hHHHHHHhccCCCCCCEEEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEEecCC
Confidence 456778888865 2 22233445667778899876 668888888888999888876553
No 321
>2e6z_A Transcription elongation factor SPT5; KOW motif, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.86 E-value=58 Score=21.48 Aligned_cols=17 Identities=24% Similarity=0.378 Sum_probs=13.3
Q ss_pred CCCCCCCCeEEecCccc
Q 024162 251 LPPFKLGEKVSLSSNFL 267 (271)
Q Consensus 251 ~pafkpGe~v~l~~~~l 267 (271)
-..|+|||.|++.+.-+
T Consensus 5 ~~~f~~GD~V~V~~Gpf 21 (59)
T 2e6z_A 5 SSGFQPGDNVEVCEGEL 21 (59)
T ss_dssp CSSCCTTSEEEECSSTT
T ss_pred cccCCCCCEEEEeecCC
Confidence 45699999999987544
No 322
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=21.45 E-value=1.4e+02 Score=26.52 Aligned_cols=56 Identities=14% Similarity=0.126 Sum_probs=40.7
Q ss_pred CCeEEEeccCCCCCC---------CCCceeEEEeccccccCCh---HHHHHHHHHhccCCcEEEEEecC
Q 024162 36 PQIITQASSLSQLPV---------ESFSIDTVLSISSSHELPG---DQLLEEISRVLKPGGTILIYKKL 92 (271)
Q Consensus 36 ~~v~~~~~d~e~lp~---------~~~sfD~V~s~~~l~~~~~---~~~L~ei~RvLKPGG~l~i~~~~ 92 (271)
.+..++..|+.+... ..+...++++-.+++++.. ..+++.+.+.+ |+|.+++.+..
T Consensus 167 ~~~~~v~~DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~e~i 234 (334)
T 1rjd_A 167 GRYKLAACDLNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWISYDPI 234 (334)
T ss_dssp SSEEEEECCTTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEEC
T ss_pred CceEEEecCCCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEEEEecc
Confidence 457788888876432 3356778888889999976 66777777766 88888777654
No 323
>3gj3_B Nuclear pore complex protein NUP153; G protein, GDP, RAN, zinc finger, acetylation, cytoplasm, GTP-binding, HOST-virus interaction; HET: GDP; 1.79A {Rattus norvegicus} SCOP: g.41.11.1 PDB: 2gqe_A
Probab=20.75 E-value=47 Score=19.55 Aligned_cols=18 Identities=28% Similarity=0.833 Sum_probs=14.5
Q ss_pred CCCCCCCCC---CCccccCCC
Q 024162 229 QSACGSCGL---GDAFRCGTC 246 (271)
Q Consensus 229 ~s~cg~c~l---gdafrc~~c 246 (271)
.=.|..|++ .+|++|.-|
T Consensus 7 ~W~C~~C~~~N~~~~~kC~aC 27 (33)
T 3gj3_B 7 TWDCDTCLVQNKPEAVKCVAC 27 (33)
T ss_dssp CEECTTTCCEECTTCSBCTTT
T ss_pred ceeCCcccCCCccccCEEccc
Confidence 346888987 789999988
No 324
>2od1_A Protein CBFA2T1; zinc finger, cross-braced topology, metal binding protein; NMR {Homo sapiens}
Probab=20.48 E-value=57 Score=21.41 Aligned_cols=20 Identities=25% Similarity=0.720 Sum_probs=16.5
Q ss_pred CCCCCCCCCCCCccccCCCC
Q 024162 228 PQSACGSCGLGDAFRCGTCP 247 (271)
Q Consensus 228 ~~s~cg~c~lgdafrc~~cp 247 (271)
....|.+|....-+||++|-
T Consensus 12 ~~~~C~~C~~~~~~~Cs~C~ 31 (60)
T 2od1_A 12 SSESCWNCGRKASETCSGCN 31 (60)
T ss_dssp CSSCCTTTSSCCCEECTTTS
T ss_pred CCCccccCCCcccccCCCCC
Confidence 35679999888889999984
No 325
>2xtt_A Protease inhibitor SGPI-1; hydrolase, catalytic mechanism, inhibition, in vitro evoluti; 0.93A {Schistocerca gregaria} PDB: 1kj0_A 2f91_B 2vu8_I 1kio_A
Probab=20.33 E-value=21 Score=21.59 Aligned_cols=17 Identities=41% Similarity=1.333 Sum_probs=13.9
Q ss_pred CCCCC-CcccCCCCCccc
Q 024162 191 DCEVG-STRKACKNCICG 207 (271)
Q Consensus 191 ~C~~~-~~~~ack~ctcg 207 (271)
.|.+| ..++-|..|+|.
T Consensus 3 ~C~pG~~~~~dCNtC~C~ 20 (36)
T 2xtt_A 3 ECEPGQTKKQDCNTCRCG 20 (36)
T ss_dssp CSCTTCEEEETTEEEEEC
T ss_pred cCCCCCEEECCCCccCCC
Confidence 57777 667889999997
No 326
>3g2e_A OORC subunit of 2-oxoglutarate:acceptor oxidoredu; structural genomics, PSI-2, protein structure initiative; 2.00A {Campylobacter jejuni}
Probab=20.24 E-value=1.6e+02 Score=23.91 Aligned_cols=32 Identities=25% Similarity=0.325 Sum_probs=23.9
Q ss_pred CceeEEEeccccccCChHHHHHHHHHhccCCcEEEEEec
Q 024162 53 FSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYKK 91 (271)
Q Consensus 53 ~sfD~V~s~~~l~~~~~~~~L~ei~RvLKPGG~l~i~~~ 91 (271)
+..|++++.. +..+.....-|||||.+++-+.
T Consensus 69 g~~D~lv~~d-------~~~~~~~~~~l~~gg~vi~ns~ 100 (194)
T 3g2e_A 69 GEVDFMLSTA-------DKGYKGFRGGVKEGGIIVVEPN 100 (194)
T ss_dssp TCEEEEEECC-------HHHHHHHGGGEEEEEEEEECTT
T ss_pred CCCCEEEEcC-------HHHHHHHHhccCCCeEEEEeCC
Confidence 4799999864 2345567888999999987653
Done!