Your job contains 1 sequence.
>024163
MLPRSLALPSPLLLSSFRSGASAEGVPKRLTYDEIQSKTYMEVKGTGTANQCPTIDGGVD
SFAFKPGKYQAKKFCLEPTSFTVKAESVNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVSP
DGTIKFVEKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPENFGGEFLVPSYRGSSFL
DPKGRGGSTGYDNAIALPAGGRGDEEDLAKENIKNTSSSTGKITLSVTKSKPETGEVIGV
FESLQPSDTDMGAKVPKDVKIQGIWYAQLEQ
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 024163
(271 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2077972 - symbol:PSBO2 "photosystem II subunit... 1163 4.2e-118 1
TAIR|locus:2154940 - symbol:PSBO1 "PS II oxygen-evolving ... 1163 4.2e-118 1
UNIPROTKB|P10549 - symbol:psbO "Photosystem II manganese-... 527 1.1e-50 1
TAIR|locus:2114975 - symbol:AT4G37230 species:3702 "Arabi... 281 1.1e-31 2
>TAIR|locus:2077972 [details] [associations]
symbol:PSBO2 "photosystem II subunit O-2" species:3702
"Arabidopsis thaliana" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0009654 "oxygen evolving complex" evidence=ISS] [GO:0015979
"photosynthesis" evidence=IEA] [GO:0030095 "chloroplast photosystem
II" evidence=ISS] [GO:0042549 "photosystem II stabilization"
evidence=IEA;IMP] [GO:0009543 "chloroplast thylakoid lumen"
evidence=IDA] [GO:0031977 "thylakoid lumen" evidence=IDA]
[GO:0009579 "thylakoid" evidence=IDA] [GO:0010242 "oxygen evolving
activity" evidence=ISS] [GO:0019684 "photosynthesis, light
reaction" evidence=ISS;RCA] [GO:0009535 "chloroplast thylakoid
membrane" evidence=IDA] [GO:0010207 "photosystem II assembly"
evidence=RCA;IMP] [GO:0009570 "chloroplast stroma" evidence=IDA]
[GO:0010287 "plastoglobule" evidence=IDA] [GO:0010205
"photoinhibition" evidence=IMP] [GO:0035304 "regulation of protein
dephosphorylation" evidence=RCA;IMP] [GO:0008266 "poly(U) RNA
binding" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009534 "chloroplast thylakoid" evidence=IDA] [GO:0000165 "MAPK
cascade" evidence=RCA] [GO:0006098 "pentose-phosphate shunt"
evidence=RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0006364 "rRNA processing"
evidence=RCA] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0009617 "response to bacterium" evidence=RCA]
[GO:0009657 "plastid organization" evidence=RCA] [GO:0009773
"photosynthetic electron transport in photosystem I" evidence=RCA]
[GO:0009862 "systemic acquired resistance, salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0009902 "chloroplast
relocation" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0010027 "thylakoid membrane organization"
evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0019761
"glucosinolate biosynthetic process" evidence=RCA] [GO:0030003
"cellular cation homeostasis" evidence=RCA] [GO:0030154 "cell
differentiation" evidence=RCA] [GO:0031348 "negative regulation of
defense response" evidence=RCA] [GO:0042742 "defense response to
bacterium" evidence=RCA] [GO:0042793 "transcription from plastid
promoter" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] [GO:0070838 "divalent
metal ion transport" evidence=RCA] InterPro:IPR002628 Pfam:PF01716
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0008266 GO:GO:0035304
GO:GO:0019898 GO:GO:0005509 GO:GO:0010205 GO:GO:0009535
GO:GO:0010287 GO:GO:0031977 EMBL:AL049862 GO:GO:0010207
GO:GO:0009654 eggNOG:NOG05777 KO:K02716 ProtClustDB:PLN00037
GO:GO:0042549 EMBL:AJ145957 EMBL:AY050362 EMBL:AY116934
EMBL:AY088799 IPI:IPI00519769 PIR:T08403 RefSeq:NP_190651.1
UniGene:At.21117 ProteinModelPortal:Q9S841 SMR:Q9S841 IntAct:Q9S841
STRING:Q9S841 SWISS-2DPAGE:Q9S841 PaxDb:Q9S841 PRIDE:Q9S841
ProMEX:Q9S841 DNASU:824246 EnsemblPlants:AT3G50820.1 GeneID:824246
KEGG:ath:AT3G50820 TAIR:At3g50820 HOGENOM:HOG000232492
InParanoid:Q9S841 OMA:KIAASPS PhylomeDB:Q9S841
Genevestigator:Q9S841 GermOnline:AT3G50820 Uniprot:Q9S841
Length = 331
Score = 1163 (414.5 bits), Expect = 4.2e-118, P = 4.2e-118
Identities = 214/251 (85%), Positives = 236/251 (94%)
Query: 20 GASAEGVPKRLTYDEIQSKTYMEVKGTGTANQCPTIDGGVDSFAFKPGKYQAKKFCLEPT 79
GA AEG PKRLTYDEIQSKTYMEVKGTGTANQCPTIDGG ++F+FK GKY KKFC EPT
Sbjct: 81 GAGAEGAPKRLTYDEIQSKTYMEVKGTGTANQCPTIDGGSETFSFKAGKYTGKKFCFEPT 140
Query: 80 SFTVKAESVNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTV 139
SFTVKA+SV+KNAPPDFQNTKLMTRLTYTLDEIEGPFEV DG++KF E+DGIDYAAVTV
Sbjct: 141 SFTVKADSVSKNAPPDFQNTKLMTRLTYTLDEIEGPFEVGSDGSVKFKEEDGIDYAAVTV 200
Query: 140 QLPGGERVPFLFTIKQLVASGKPENFGGEFLVPSYRGSSFLDPKGRGGSTGYDNAIALPA 199
QLPGGERVPFLFT+KQL ASGKPE+F G+FLVPSYRGSSFLDPKGRGGSTGYDNA+ALPA
Sbjct: 201 QLPGGERVPFLFTVKQLEASGKPESFSGKFLVPSYRGSSFLDPKGRGGSTGYDNAVALPA 260
Query: 200 GGRGDEEDLAKENIKNTSSSTGKITLSVTKSKPETGEVIGVFESLQPSDTDMGAKVPKDV 259
GGRGDEE+L+KEN+KNT++S G+ITL +TKSKPETGEVIGVFESLQPSDTD+GAKVPKDV
Sbjct: 261 GGRGDEEELSKENVKNTAASVGEITLKITKSKPETGEVIGVFESLQPSDTDLGAKVPKDV 320
Query: 260 KIQGIWYAQLE 270
KIQG+WY Q+E
Sbjct: 321 KIQGVWYGQIE 331
>TAIR|locus:2154940 [details] [associations]
symbol:PSBO1 "PS II oxygen-evolving complex 1"
species:3702 "Arabidopsis thaliana" [GO:0005509 "calcium ion
binding" evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0009543 "chloroplast thylakoid lumen" evidence=IDA] [GO:0009654
"oxygen evolving complex" evidence=ISS] [GO:0015979
"photosynthesis" evidence=IEA] [GO:0030095 "chloroplast photosystem
II" evidence=ISS] [GO:0042549 "photosystem II stabilization"
evidence=IEA;IMP] [GO:0031977 "thylakoid lumen" evidence=IDA]
[GO:0009579 "thylakoid" evidence=IDA] [GO:0009535 "chloroplast
thylakoid membrane" evidence=IDA] [GO:0010207 "photosystem II
assembly" evidence=RCA;IMP] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0010287 "plastoglobule" evidence=IDA] [GO:0042742
"defense response to bacterium" evidence=IEP;RCA] [GO:0010205
"photoinhibition" evidence=IMP] [GO:0035304 "regulation of protein
dephosphorylation" evidence=RCA;IMP] [GO:0008266 "poly(U) RNA
binding" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009534
"chloroplast thylakoid" evidence=IDA] [GO:0000165 "MAPK cascade"
evidence=RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0006364 "rRNA processing"
evidence=RCA] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0009409 "response to cold" evidence=RCA]
[GO:0009595 "detection of biotic stimulus" evidence=RCA]
[GO:0009617 "response to bacterium" evidence=RCA] [GO:0009697
"salicylic acid biosynthetic process" evidence=RCA] [GO:0009814
"defense response, incompatible interaction" evidence=RCA]
[GO:0009862 "systemic acquired resistance, salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0009902 "chloroplast
relocation" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0010027 "thylakoid membrane organization"
evidence=RCA] [GO:0010200 "response to chitin" evidence=RCA]
[GO:0010310 "regulation of hydrogen peroxide metabolic process"
evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
response" evidence=RCA] [GO:0019344 "cysteine biosynthetic process"
evidence=RCA] [GO:0019684 "photosynthesis, light reaction"
evidence=IDA;RCA] [GO:0030003 "cellular cation homeostasis"
evidence=RCA] [GO:0030154 "cell differentiation" evidence=RCA]
[GO:0031348 "negative regulation of defense response" evidence=RCA]
[GO:0042793 "transcription from plastid promoter" evidence=RCA]
[GO:0043900 "regulation of multi-organism process" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0050832 "defense response to fungus"
evidence=RCA] [GO:0070838 "divalent metal ion transport"
evidence=RCA] [GO:0010242 "oxygen evolving activity" evidence=IDA]
InterPro:IPR002628 Pfam:PF01716 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0008266 GO:GO:0035304 GO:GO:0019898
GO:GO:0048046 GO:GO:0042742 GO:GO:0005509 GO:GO:0010205
GO:GO:0009535 GO:GO:0010287 GO:GO:0009543 EMBL:AB013389
GO:GO:0010207 GO:GO:0009654 EMBL:X52428 EMBL:Y15433 EMBL:AF424626
EMBL:AY052299 EMBL:AY061924 EMBL:AF372898 EMBL:AY136291
EMBL:AY054583 EMBL:AY056401 EMBL:BT000407 EMBL:AY087630 EMBL:Z18374
IPI:IPI00545883 PIR:S11852 RefSeq:NP_201458.1 UniGene:At.25361
UniGene:At.48629 UniGene:At.72732 ProteinModelPortal:P23321
SMR:P23321 IntAct:P23321 MINT:MINT-2583944 STRING:P23321
SWISS-2DPAGE:P23321 PaxDb:P23321 PRIDE:P23321 DNASU:836789
EnsemblPlants:AT5G66570.1 GeneID:836789 KEGG:ath:AT5G66570
TAIR:At5g66570 eggNOG:NOG05777 InParanoid:P23321 KO:K02716
OMA:PSYRTSN PhylomeDB:P23321 ProtClustDB:PLN00037
BioCyc:MetaCyc:AT5G66570-MONOMER Genevestigator:P23321
GermOnline:AT5G66570 GO:GO:0010242 GO:GO:0042549 Uniprot:P23321
Length = 332
Score = 1163 (414.5 bits), Expect = 4.2e-118, P = 4.2e-118
Identities = 215/251 (85%), Positives = 237/251 (94%)
Query: 20 GASAEGVPKRLTYDEIQSKTYMEVKGTGTANQCPTIDGGVDSFAFKPGKYQAKKFCLEPT 79
GASAEG PKRLTYDEIQSKTYMEVKGTGTANQCPTIDGG ++F+FKPGKY KKFC EPT
Sbjct: 82 GASAEGAPKRLTYDEIQSKTYMEVKGTGTANQCPTIDGGSETFSFKPGKYAGKKFCFEPT 141
Query: 80 SFTVKAESVNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTV 139
SFTVKA+SV+KNAPP+FQNTKLMTRLTYTLDEIEGPFEV+ DG++ F E+DGIDYAAVTV
Sbjct: 142 SFTVKADSVSKNAPPEFQNTKLMTRLTYTLDEIEGPFEVASDGSVNFKEEDGIDYAAVTV 201
Query: 140 QLPGGERVPFLFTIKQLVASGKPENFGGEFLVPSYRGSSFLDPKGRGGSTGYDNAIALPA 199
QLPGGERVPFLFT+KQL ASGKP++F G+FLVPSYRGSSFLDPKGRGGSTGYDNA+ALPA
Sbjct: 202 QLPGGERVPFLFTVKQLDASGKPDSFTGKFLVPSYRGSSFLDPKGRGGSTGYDNAVALPA 261
Query: 200 GGRGDEEDLAKENIKNTSSSTGKITLSVTKSKPETGEVIGVFESLQPSDTDMGAKVPKDV 259
GGRGDEE+L KEN+KNT++S G+ITL VTKSKPETGEVIGVFESLQPSDTD+GAKVPKDV
Sbjct: 262 GGRGDEEELVKENVKNTAASVGEITLKVTKSKPETGEVIGVFESLQPSDTDLGAKVPKDV 321
Query: 260 KIQGIWYAQLE 270
KIQG+WY QLE
Sbjct: 322 KIQGVWYGQLE 332
>UNIPROTKB|P10549 [details] [associations]
symbol:psbO "Photosystem II manganese-stabilizing
polypeptide" species:1111708 "Synechocystis sp. PCC 6803 substr.
Kazusa" [GO:0030096 "plasma membrane-derived thylakoid photosystem
II" evidence=IDA] InterPro:IPR002628 Pfam:PF01716 GO:GO:0019898
GO:GO:0005509 EMBL:BA000022 GenomeReviews:BA000022_GR GO:GO:0015979
GO:GO:0030096 GO:GO:0009654 eggNOG:NOG05777 KO:K02716 OMA:PSYRTSN
GO:GO:0042549 HOGENOM:HOG000232492 EMBL:X07986 PIR:S01261
RefSeq:NP_441796.1 RefSeq:YP_005651856.1 ProteinModelPortal:P10549
SMR:P10549 IntAct:P10549 STRING:P10549 GeneID:12254512
GeneID:954960 KEGG:syn:sll0427 KEGG:syy:SYNGTS_1903 PATRIC:23841086
ProtClustDB:CLSK893286 BioCyc:MetaCyc:PSBO-MONOMER Uniprot:P10549
Length = 274
Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
Identities = 110/242 (45%), Positives = 147/242 (60%)
Query: 39 TYMEVKGTGTANQCPTIDGGV-DSFAFKPG-KYQAKKFCLEPTSFTVKAESVNKNAPPDF 96
TY ++ TG AN CP I + +P KY FC+EP + VK E VNK ++
Sbjct: 35 TYDDIVNTGLANVCPEISSFTRGTIEVEPNTKYFVSDFCMEPQEYFVKEEPVNKRQKAEY 94
Query: 97 QNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTVQLPGGERVPFLFTIKQL 156
K++TR T +L++I G V DGT+ F EKDGID+ +TV LPGGE VPF FT+K
Sbjct: 95 VKGKVLTRQTTSLEQIRGSIAVGADGTLTFKEKDGIDFQPITVLLPGGEEVPFFFTVKNF 154
Query: 157 VASGKP--------ENFGGEFLVPSYRGSSFLDPKGRGGSTGYDNAIALPAGGRGDEEDL 208
+ +P +F G+F VPSYRG+ FLDPK RG TGYDNA+ALP+ D
Sbjct: 155 TGTTEPGFTSINSSTDFVGDFNVPSYRGAGFLDPKARGLYTGYDNAVALPSAA-----DK 209
Query: 209 AKENIKNTSSSTGKITLSVTKSKPETGEVIGVFESLQPSDTDMGAKVPKDVKIQGIWYAQ 268
+ N K T G ++L VT+ TGE+ G+FES QPSDTD+GAK P DVK++GI+Y +
Sbjct: 210 FRTNKKETPLGKGTLSLQVTQVDGSTGEIAGIFESEQPSDTDLGAKEPLDVKVRGIFYGR 269
Query: 269 LE 270
++
Sbjct: 270 VD 271
>TAIR|locus:2114975 [details] [associations]
symbol:AT4G37230 species:3702 "Arabidopsis thaliana"
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM] [GO:0009523 "photosystem II"
evidence=IEA] [GO:0009654 "oxygen evolving complex"
evidence=IEA;ISS] [GO:0015979 "photosynthesis" evidence=IEA]
[GO:0019898 "extrinsic to membrane" evidence=IEA] [GO:0042549
"photosystem II stabilization" evidence=IEA] InterPro:IPR002628
Pfam:PF01716 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0019898
GO:GO:0005509 EMBL:AL161591 EMBL:Z99707 GO:GO:0015979 GO:GO:0009654
eggNOG:NOG05777 GO:GO:0042549 HOGENOM:HOG000232492 IPI:IPI00526372
PIR:H85439 RefSeq:NP_195440.1 UniGene:At.50625 UniGene:At.54639
ProteinModelPortal:Q9SW65 SMR:Q9SW65 STRING:Q9SW65
EnsemblPlants:AT4G37230.1 GeneID:829877 KEGG:ath:AT4G37230
TAIR:At4g37230 PhylomeDB:Q9SW65 ArrayExpress:Q9SW65
Genevestigator:Q9SW65 Uniprot:Q9SW65
Length = 143
Score = 281 (104.0 bits), Expect = 1.1e-31, Sum P(2) = 1.1e-31
Identities = 70/141 (49%), Positives = 87/141 (61%)
Query: 132 IDYAAVTVQLPGGERVPFLF-TIKQLVASGKPENFGGEFLVPSYRGSSFLDPKGRGGSTG 190
+DYAAVTV V ++ + + +S + G +PS + K G
Sbjct: 17 VDYAAVTVH---NFLVGSVYRSCSRSSSSWHRRGYFGPKSIPSAFTQGHVGNKS-DQYQG 72
Query: 191 YDNAIALPAGGRGDEEDLAKENIKNTSSSTGKITLSVTKSKPETGEVIGVFESLQPSDTD 250
YDNA+ALPA RG+ E+LAKEN KITLSVTKS PE+GEVIG FES+QPSDTD
Sbjct: 73 YDNAVALPA--RGNNEELAKEN--------NKITLSVTKSNPESGEVIGAFESIQPSDTD 122
Query: 251 MGAKVPKDVKIQGIWYAQLEQ 271
+GA PKDVKIQGIWY QL++
Sbjct: 123 LGATTPKDVKIQGIWYCQLDE 143
Score = 82 (33.9 bits), Expect = 1.1e-31, Sum P(2) = 1.1e-31
Identities = 16/17 (94%), Positives = 16/17 (94%)
Query: 102 MTRLTYTLDEIEGPFEV 118
MT LTYTLDEIEGPFEV
Sbjct: 1 MTSLTYTLDEIEGPFEV 17
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.311 0.133 0.382 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 271 253 0.00083 114 3 11 23 0.41 34
32 0.47 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 4
No. of states in DFA: 577 (61 KB)
Total size of DFA: 167 KB (2099 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 22.86u 0.13s 22.99t Elapsed: 00:00:01
Total cpu time: 22.86u 0.13s 22.99t Elapsed: 00:00:01
Start: Tue May 21 02:11:45 2013 End: Tue May 21 02:11:46 2013