Query 024172
Match_columns 271
No_of_seqs 135 out of 240
Neff 5.0
Searched_HMMs 46136
Date Fri Mar 29 02:36:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024172.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/024172hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3094 Predicted membrane pro 100.0 7.5E-84 1.6E-88 584.6 22.3 257 1-264 11-284 (284)
2 PF03878 YIF1: YIF1; InterPro 100.0 3.7E-79 8.1E-84 554.4 20.8 217 42-263 12-240 (240)
3 COG5197 Predicted membrane pro 100.0 3.3E-60 7.1E-65 423.3 18.9 215 43-262 57-283 (284)
4 KOG3114 Uncharacterized conser 98.8 5.9E-08 1.3E-12 90.9 12.8 153 62-234 73-246 (290)
5 PF04893 Yip1: Yip1 domain; I 95.4 0.12 2.5E-06 42.6 8.7 90 114-204 18-120 (172)
6 COG5080 YIP1 Rab GTPase intera 95.2 0.17 3.7E-06 46.2 9.7 120 78-226 72-198 (227)
7 KOG3103 Rab GTPase interacting 94.6 0.12 2.6E-06 47.9 7.2 126 72-226 89-221 (249)
8 KOG2946 Uncharacterized conser 92.0 6 0.00013 36.6 13.6 103 74-200 70-172 (234)
9 KOG3472 Predicted small membra 50.4 8.2 0.00018 31.9 1.1 53 34-96 13-66 (112)
10 KOG2568 Predicted membrane pro 47.7 3.4E+02 0.0075 28.2 12.6 137 123-264 201-360 (518)
11 PF06679 DUF1180: Protein of u 40.4 39 0.00085 29.7 3.9 26 206-231 95-120 (163)
12 PF12129 Phtf-FEM1B_bdg: Male 33.1 20 0.00043 31.5 0.9 53 41-96 14-90 (159)
13 PF05512 AWPM-19: AWPM-19-like 32.0 1.1E+02 0.0025 26.4 5.3 53 123-175 49-109 (142)
14 KOG1924 RhoA GTPase effector D 27.8 45 0.00098 36.4 2.6 7 78-84 658-664 (1102)
15 KOG2675 Adenylate cyclase-asso 23.5 85 0.0018 32.0 3.4 14 12-25 235-248 (480)
16 CHL00105 psaJ photosystem I su 20.4 79 0.0017 22.0 1.8 26 123-149 12-37 (42)
17 PRK02733 photosystem I reactio 20.3 83 0.0018 21.9 1.9 27 123-150 12-38 (42)
18 PF00689 Cation_ATPase_C: Cati 20.2 1.8E+02 0.0038 24.3 4.4 23 206-229 91-113 (182)
No 1
>KOG3094 consensus Predicted membrane protein [Function unknown]
Probab=100.00 E-value=7.5e-84 Score=584.58 Aligned_cols=257 Identities=49% Similarity=0.887 Sum_probs=241.6
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCccccccchhhhchHH---------hhHHHHHhhhhHHHHhhhhhhcc--CCcc
Q 024172 1 MYSNMGTQPGPGMPRPAADAQPNPFGNAFYGAGSGLIRGGLG---------AYGEKILGSSSEYVQSNISRYFS--DPQY 69 (271)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---------~yG~~~~~~g~~yvq~n~~~y~~--~lky 69 (271)
++++.+++ +++++|.-+|.+.|+||+.+|.|++..+.+++ +|||+++++|+||||+|++||++ ++||
T Consensus 11 ~~~~~~p~--a~~p~p~~dp~~Gp~g~~~~G~g~~~~~~~l~g~~~a~~~~~~Gk~~~~~~~E~v~~~~~k~~~~~~l~y 88 (284)
T KOG3094|consen 11 DPNHAGPA--APMPVPQFDPTPGPFGNPVTGAGAGFPVQGLGGSPMADMAMAYGKKIAGQGKEYVEKNLGKYVSVPKLKY 88 (284)
T ss_pred CCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCcCcccCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhhccCccceE
Confidence 34556666 67777776788889999999999999999988 99999999999999999999998 7899
Q ss_pred eeeeChHHHHHhhceeeccccccCCceeeecCCCCccCCCCCccCCCCCCcccchhHHHHHHHHHHHHhhhcCCCChhhH
Q 024172 70 YFQVNDQYVRNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAPDLYIPFMAFGTYVVLAGFTLGLQGKFTPEAL 149 (271)
Q Consensus 70 YF~VdnsYV~~KL~lllFPf~hk~~W~R~~e~~~g~~~~~pPr~DinAPDLYIPlMafvTYILL~g~~~G~~g~FsPE~L 149 (271)
||+|||+||.|||++|+|||+||+ |+|+.|. ++++|||||+||||||||+|||+||||++|+.+|++|+|+||.|
T Consensus 89 YF~Vdn~YV~~KL~lilfPf~hk~-W~~~~~~----~~~~PPr~DvNaPDLYiP~MafiTYIll~gl~lGlqg~FsPE~L 163 (284)
T KOG3094|consen 89 YFAVDNAYVGKKLKLILFPFLHKD-WTRIYER----ESPLPPRYDVNAPDLYIPLMAFITYILLAGLLLGLQGRFSPEAL 163 (284)
T ss_pred EEEechHHHhhhheEEEeeecCcc-hhhhhcc----cCCCCccccCCCcchhhhHHHHHHHHHHHHHHhhhccCCCHHHH
Confidence 999999999999999999999995 9999883 46999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcc-CCCCCcceeeeecccchhhHHHHHHHHHhh-hhHHHHHHHHHHHHHHHHHHHH
Q 024172 150 NWLFIKGLFGWFMQFMLLKVTLLSLG-SGEAPLLDVVAYAGYTFTGLCLAVLGRIVF-SYSYYFLILWMCMCMGVFLVKT 227 (271)
Q Consensus 150 g~~~s~~l~~~~lEv~ilk~~~Y~l~-~~~~~~lDlvAysGYKyv~i~~~ll~~l~~-~~~yy~~~ly~~~a~~~Fl~Rt 227 (271)
|+.+|+++++|++|++++|+++|+++ +++.+++|++||+|||||++|++.+.++++ .+.||+++.|+++|.++||+||
T Consensus 164 g~~~s~al~~v~le~l~l~l~lY~l~vs~~ls~ldllAysGYKfv~liL~~L~k~~~~~~~yyi~~~yt~~a~gvFLlRS 243 (284)
T KOG3094|consen 164 GILASKALAWVILEVLLLKLGLYLLNVSSSLSTLDLLAYSGYKFVGLILAQLTKLLFGPYGYYIALAYTYLAFGVFLLRS 243 (284)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHheecccCCcchhHhhhhcccchHHHHHHHHhhheecchhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999 589999999999999999999999999986 5999999999999999999999
Q ss_pred HHHHhhhcccccC----CccceeehhHHHHHHHHHHHHhhh
Q 024172 228 MKRVLFAEMRTHD----SSRHHYLLIFIAFAQLPLFLWLGN 264 (271)
Q Consensus 228 Lk~~ll~e~~~~~----~~r~~yfl~~ia~~Q~~l~~wL~~ 264 (271)
||+.+++|.+..+ ++||+||||++|++|+++++||++
T Consensus 244 lK~~ll~~~~~~~~v~q~~r~~YfLf~ia~~Q~~~l~wLs~ 284 (284)
T KOG3094|consen 244 LKRALLAESSMADPVPQSSRRLYFLFFIAAVQFLILYWLSN 284 (284)
T ss_pred HHHHHcCCccccCccchhhhhHHHHHHHHHHHHHHHHHhcC
Confidence 9999999988776 899999999999999999999974
No 2
>PF03878 YIF1: YIF1; InterPro: IPR005578 This family includes a number of eukaryotic proteins. It is an integral membrane protein, conserved in at least 1 copy in all sequenced eukaryotes. The gene name in Schizosaccharomyces pombe (Fission yeast) is hrf1+ for Heavy metal Resistance Factor 1.
Probab=100.00 E-value=3.7e-79 Score=554.39 Aligned_cols=217 Identities=45% Similarity=0.900 Sum_probs=205.1
Q ss_pred HhhHHHHHhhhhHHHHhhhhhhcc--CCcceeeeChHHHHHhhceeeccccccCCceeeecCCCCccCCCCCccCCCCCC
Q 024172 42 GAYGEKILGSSSEYVQSNISRYFS--DPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAPD 119 (271)
Q Consensus 42 ~~yG~~~~~~g~~yvq~n~~~y~~--~lkyYF~VdnsYV~~KL~lllFPf~hk~~W~R~~e~~~g~~~~~pPr~DinAPD 119 (271)
+||||+++++|+||||||++||++ ++||||||||+||+|||++|+|||+|| +|+|+.| +++++|||+|+||||
T Consensus 12 ~q~G~~~~~~g~~~v~~~~~~~~~~~~lk~YF~V~n~YV~~KL~lllfPf~~k-~W~r~~~----~~~~~~Pr~DvNAPD 86 (240)
T PF03878_consen 12 MQYGQSALNQGQEYVQKNLGRYVSVSSLKYYFAVDNSYVLKKLKLLLFPFLHK-DWSRKYE----QESYLPPREDVNAPD 86 (240)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhcCcccceeeEECCHHHHHHHHHHeecccccC-Ccccccc----ccCCCCchhhccCcc
Confidence 499999999999999999999997 799999999999999999999999999 5999887 346999999999999
Q ss_pred cccchhHHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCCCcceeeeecccchhhHHHH
Q 024172 120 LYIPFMAFGTYVVLAGFTLGLQGKFTPEALNWLFIKGLFGWFMQFMLLKVTLLSLG-SGEAPLLDVVAYAGYTFTGLCLA 198 (271)
Q Consensus 120 LYIPlMafvTYILL~g~~~G~~g~FsPE~Lg~~~s~~l~~~~lEv~ilk~~~Y~l~-~~~~~~lDlvAysGYKyv~i~~~ 198 (271)
||||+||++||||++|+.+|++|+||||.||.++|+|+++|++|++++|+++|+++ +++.+++|++||+|||||++|++
T Consensus 87 LYIPlMa~vTYiLl~g~~~G~~g~F~Pe~Lg~~~s~al~~~~lEv~i~k~~~y~l~~~~~~~~lDlvay~GYKfv~ii~~ 166 (240)
T PF03878_consen 87 LYIPLMAFVTYILLSGLILGLQGRFSPELLGIQASSALVWWFLEVLIIKLGLYLLNISSSLPILDLVAYSGYKFVGIILT 166 (240)
T ss_pred cccchHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHhhcchHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999 58999999999999999999999
Q ss_pred HHHHHhh-hhHHHHHHHHHHHHHHHHHHHHHHHHhhhccc-cc-------CCccceeehhHHHHHHHHHHHHhh
Q 024172 199 VLGRIVF-SYSYYFLILWMCMCMGVFLVKTMKRVLFAEMR-TH-------DSSRHHYLLIFIAFAQLPLFLWLG 263 (271)
Q Consensus 199 ll~~l~~-~~~yy~~~ly~~~a~~~Fl~RtLk~~ll~e~~-~~-------~~~r~~yfl~~ia~~Q~~l~~wL~ 263 (271)
++++++. +++||++++|+++|+++|++||||+.++++.+ ++ +++||+||++++|++|+|++||||
T Consensus 167 ~l~~~l~~~~~yy~~~ly~~~a~~~Fl~RsLk~~i~~~~~~~~~~~~~~~~~~~r~yfL~~~a~~Q~~l~~wLt 240 (240)
T PF03878_consen 167 LLASLLFGSWVYYIALLYTSFANAFFLLRSLKRVILPSPSSSYGSVSSSSQRKRRNYFLFFIAIVQPPLMFWLT 240 (240)
T ss_pred HHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccccceeehhHHHHHHHHHHHHHHhhC
Confidence 9999885 69999999999999999999999999996432 22 378999999999999999999996
No 3
>COG5197 Predicted membrane protein [Function unknown]
Probab=100.00 E-value=3.3e-60 Score=423.26 Aligned_cols=215 Identities=34% Similarity=0.605 Sum_probs=196.5
Q ss_pred hhHHHHHhhhhHHHHhhhhhhcc--CCcceeeeChHHHHHhhceeeccccccCCceeeecCCCCccCCCCCccCCCCCCc
Q 024172 43 AYGEKILGSSSEYVQSNISRYFS--DPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAPDL 120 (271)
Q Consensus 43 ~yG~~~~~~g~~yvq~n~~~y~~--~lkyYF~VdnsYV~~KL~lllFPf~hk~~W~R~~e~~~g~~~~~pPr~DinAPDL 120 (271)
+-||.++++++|||+|++++..+ .+++||+|||+||.+||++|+|||++| +|+|..+. +.|+|||||+|+|||
T Consensus 57 ~iGk~a~n~~qEyv~k~~g~~~s~~~~~tYF~V~n~yVi~KL~LIlfPf~nk-~W~r~gd~----eg~~pp~~d~nsPdm 131 (284)
T COG5197 57 FIGKDAFNQFQEYVNKATGNAASSQQISTYFQVSNRYVINKLKLILFPFLNK-NWQRIGDS----EGFLPPRDDVNSPDM 131 (284)
T ss_pred HHhHHHHHHHHHHHHHhhcccccccceeEEEEechHhHHhhhheEEeecccc-hhhhccCC----CCCCCchhhcCCccc
Confidence 47999999999999999999997 799999999999999999999999999 79996444 459999999999999
Q ss_pred ccchhHHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCCCcceeeeecccchhhHHHHH
Q 024172 121 YIPFMAFGTYVVLAGFTLGLQGKFTPEALNWLFIKGLFGWFMQFMLLKVTLLSLG-SGEAPLLDVVAYAGYTFTGLCLAV 199 (271)
Q Consensus 121 YIPlMafvTYILL~g~~~G~~g~FsPE~Lg~~~s~~l~~~~lEv~ilk~~~Y~l~-~~~~~~lDlvAysGYKyv~i~~~l 199 (271)
|+|+|+|+||||+++..+|++|.|+||.||..+|++++..++|+++.|++||+++ +...+++|++||+|||||+++++-
T Consensus 132 Y~P~M~fvtyILl~~~~~GL~g~F~PE~lg~~~s~~~a~v~v~~l~trlg~Yll~~s~~~~~ldllaysGYKfV~liL~q 211 (284)
T COG5197 132 YMPIMGFVTYILLWNTQQGLKGSFNPEDLGYKLSSTLAFVCVDLLITRLGLYLLIDSKIPSFLDLLAYSGYKFVPLILAQ 211 (284)
T ss_pred cchHHHHHHHHHHHHHHhhcccCCCHHHhhHHHHHHHHHHHHHHHHHHhceEEEeecccchhhhhhhhcccccHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999998 556779999999999999999988
Q ss_pred HHHHhh-hhHHHHHHHHHHHHHHHHHHHHHHHHhhhccc--------ccCCccceeehhHHHHHHHHHHHHh
Q 024172 200 LGRIVF-SYSYYFLILWMCMCMGVFLVKTMKRVLFAEMR--------THDSSRHHYLLIFIAFAQLPLFLWL 262 (271)
Q Consensus 200 l~~l~~-~~~yy~~~ly~~~a~~~Fl~RtLk~~ll~e~~--------~~~~~r~~yfl~~ia~~Q~~l~~wL 262 (271)
+.+.+. .|.--+...|..+|.++||+||+|+.++++.. +++++||+||||++++.|..+||-|
T Consensus 212 L~k~~~Mp~v~~i~~~Ylyiaf~vFLlRSlK~~vl~~s~~~i~asis~~~r~rr~YfLF~i~i~Q~~~m~ll 283 (284)
T COG5197 212 LLKNVTMPFVLNILIFYLYIAFGVFLLRSLKFNVLSRSGAEIHASISKSTRKRRNYFLFVIFIWQNVLMWLL 283 (284)
T ss_pred HhhhccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccceeeeeechhhhhheeeeeehHHHHHHHHHHhh
Confidence 888774 66666777999999999999999999999763 2358999999999999998776655
No 4
>KOG3114 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.81 E-value=5.9e-08 Score=90.94 Aligned_cols=153 Identities=22% Similarity=0.263 Sum_probs=94.6
Q ss_pred hhcc--CCcceeeeChHHHHHhhceeeccccccCCceeeecCCCCccCCCCCccCCCCCCcccchhHHHHHHHHHHHHh-
Q 024172 62 RYFS--DPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAPDLYIPFMAFGTYVVLAGFTL- 138 (271)
Q Consensus 62 ~y~~--~lkyYF~VdnsYV~~KL~lllFPf~hk~~W~R~~e~~~g~~~~~pPr~DinAPDLYIPlMafvTYILL~g~~~- 138 (271)
+|+. -.|.|||||++-|++||+-.++| ++ + . .|+. -+.||||-|+|...|-|-+.+...
T Consensus 73 ~~~ti~yyq~fFdVDt~qV~~Rl~~SliP--~~-~-~--~~~~------------~~~PDLYGPfWI~~TlVf~l~~~g~ 134 (290)
T KOG3114|consen 73 SFFTIEYYQPFFDVDTAQVRKRLKESLIP--RN-Y-V--RDQI------------QDNPDLYGPFWITATLVFALAISGN 134 (290)
T ss_pred ccccHHhhccccCCCHHHHHHHHHHhcCC--cc-c-c--cccc------------CCCccccccHHHHHHHHHHHHHccc
Confidence 3544 67999999999999999999999 22 1 1 1222 168999999999999887766543
Q ss_pred --------hhcC-CCChhhHHHHHHHHHHHHHHHHHHHHHHHHh-----c---cCCCCCcceeeeecccchhhHHHHHHH
Q 024172 139 --------GLQG-KFTPEALNWLFIKGLFGWFMQFMLLKVTLLS-----L---GSGEAPLLDVVAYAGYTFTGLCLAVLG 201 (271)
Q Consensus 139 --------G~~g-~FsPE~Lg~~~s~~l~~~~lEv~ilk~~~Y~-----l---~~~~~~~lDlvAysGYKyv~i~~~ll~ 201 (271)
+.+| +..++ ++. .+++..+...=+.++.+.++- = +..-..++|+++.-||.-...+-+++.
T Consensus 135 ~~~~i~~~t~~g~~~g~~-f~~-v~saa~~iy~Y~~ivp~~l~~iL~~~~~~~~~~~~~l~~~~~iygysl~i~ip~~vl 212 (290)
T KOG3114|consen 135 LATFIRNGTLKGTAYGYD-FGL-VTSAATLIYGYLTIVPLALWGILSWNGYSLLLHCYVLLELVCIYGYSLFIFIPLLVL 212 (290)
T ss_pred HHHHHHhccccceeeecc-cch-HHHHHHHHHHHHHHHHHHHHHHHHhccccccccceehhhHHHHHhhHHHHHHHHHHH
Confidence 2233 22222 112 222222222223333333332 1 122356799999999987776666666
Q ss_pred HHhh-hhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 024172 202 RIVF-SYSYYFLILWMCMCMGVFLVKTMKRVLFA 234 (271)
Q Consensus 202 ~l~~-~~~yy~~~ly~~~a~~~Fl~RtLk~~ll~ 234 (271)
.++. ++.=|+...-.....+.||.+++.-.+..
T Consensus 213 ~iv~~~~~~wvl~~~~~~~S~~~L~~~l~p~~~~ 246 (290)
T KOG3114|consen 213 WIVPSSMVQWVLVGTALGLSGTFLAGTLWPAVRL 246 (290)
T ss_pred HhccHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 6664 55555555555566678888888866543
No 5
>PF04893 Yip1: Yip1 domain; InterPro: IPR006977 This entry contains proteins belonging to the Yip1 family and represents the Yip1 domain. The Yip1 integral membrane domain contains four transmembrane alpha helices. The domain is characterised by the motifs DLYGP and GY. The Yip1 protein is a golgi protein involved in vesicular transport that interacts with GTPases [].; GO: 0016020 membrane
Probab=95.42 E-value=0.12 Score=42.59 Aligned_cols=90 Identities=20% Similarity=0.202 Sum_probs=59.3
Q ss_pred CCCCCCcccchhHHHHHHHHHHHHhhhcCCCChh---------hHHHH-HHHH---HHHHHHHHHHHHHHHHhccCCCCC
Q 024172 114 DINAPDLYIPFMAFGTYVVLAGFTLGLQGKFTPE---------ALNWL-FIKG---LFGWFMQFMLLKVTLLSLGSGEAP 180 (271)
Q Consensus 114 DinAPDLYIPlMafvTYILL~g~~~G~~g~FsPE---------~Lg~~-~s~~---l~~~~lEv~ilk~~~Y~l~~~~~~ 180 (271)
+.+.+|+|.++++.++.+..........+.+.++ ..-.. .... ++.+++=..+++..+.+++ ++.+
T Consensus 18 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~g-g~~~ 96 (172)
T PF04893_consen 18 ISKSWWLPLLLVILLTLVFGLLSSLNIPWYVDSGGSAYMFSFGSLLGSIIGGFIIILIGWFILALILHLIAKLFG-GKGS 96 (172)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhhhhhhccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCC
Confidence 4478999999999999998877775444444433 11111 1111 1333344444455555555 7888
Q ss_pred cceeeeecccchhhHHHHHHHHHh
Q 024172 181 LLDVVAYAGYTFTGLCLAVLGRIV 204 (271)
Q Consensus 181 ~lDlvAysGYKyv~i~~~ll~~l~ 204 (271)
+-|..+..||..++.++..+...+
T Consensus 97 ~~~~~~~~~ya~~P~~~~~~~~~~ 120 (172)
T PF04893_consen 97 FKETFSVVGYALIPLLLGSLISII 120 (172)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999988776554
No 6
>COG5080 YIP1 Rab GTPase interacting factor, Golgi membrane protein [Intracellular trafficking and secretion]
Probab=95.22 E-value=0.17 Score=46.17 Aligned_cols=120 Identities=21% Similarity=0.389 Sum_probs=77.9
Q ss_pred HHHhhceeeccccccCCceeeecCCCCccCCCCCccCCCCCCcccchhHHHHHHHHHHHHhhhcCCCChhhHHHHHHHHH
Q 024172 78 VRNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAPDLYIPFMAFGTYVVLAGFTLGLQGKFTPEALNWLFIKGL 157 (271)
Q Consensus 78 V~~KL~lllFPf~hk~~W~R~~e~~~g~~~~~pPr~DinAPDLYIPlMafvTYILL~g~~~G~~g~FsPE~Lg~~~s~~l 157 (271)
.++|...++-|+.||.. +-.+.-||--|+. |++|-++.+-+++| -..|...
T Consensus 72 i~~ks~~vl~p~~~~~~------------------~i~~d~DL~gPli----F~lL~sLfLsla~~---shFgyiy---- 122 (227)
T COG5080 72 IKSKSDDVLGPFDNKAF------------------DILADCDLWGPLI----FILLYSLFLSLAGK---SHFGYIY---- 122 (227)
T ss_pred cccccceeeecccccch------------------hhhhcccccccHH----HHHHHHHHHHhccc---ceeehhh----
Confidence 56899999999987730 1135578888865 66677777777776 2222222
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCcceeeeecccchhhHHHHHHHHHhh------hhHHHH-HHHHHHHHHHHHHHH
Q 024172 158 FGWFMQFMLLKVTLLSLGSGEAPLLDVVAYAGYTFTGLCLAVLGRIVF------SYSYYF-LILWMCMCMGVFLVK 226 (271)
Q Consensus 158 ~~~~lEv~ilk~~~Y~l~~~~~~~lDlvAysGYKyv~i~~~ll~~l~~------~~~yy~-~~ly~~~a~~~Fl~R 226 (271)
++..+-.+.+.+.+-+++..+.+++.-++..||.+.++++.-+.+++. .+..+. ..+|+..|.+.++-+
T Consensus 123 ~islfg~lsl~~~lrLl~~~ni~f~~~~SIlGYs~lPlv~~slv~~i~~~i~i~~~vv~~l~~~Ws~~AaS~v~~~ 198 (227)
T COG5080 123 GISLFGTLSLHLLLRLLGHKNISFFSTISILGYSLLPLVFNSLVSIILGRILILGYVVVALFLIWSTYAASGVLKS 198 (227)
T ss_pred HHHHHHHHHHHHHHHHhccCceeeeehhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222333344455556667778999999999999999998887766542 122333 367777776655443
No 7
>KOG3103 consensus Rab GTPase interacting factor, Golgi membrane protein [Intracellular trafficking, secretion, and vesicular transport]
Probab=94.65 E-value=0.12 Score=47.87 Aligned_cols=126 Identities=20% Similarity=0.260 Sum_probs=84.9
Q ss_pred eeChHHHHHhhceeeccccccCCceeeecCCCCccCCCCCccCCCCCCcccchhHHHHHHHHHHHHhhhcCCCChhhHHH
Q 024172 72 QVNDQYVRNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAPDLYIPFMAFGTYVVLAGFTLGLQGKFTPEALNW 151 (271)
Q Consensus 72 ~VdnsYV~~KL~lllFPf~hk~~W~R~~e~~~g~~~~~pPr~DinAPDLYIPlMafvTYILL~g~~~G~~g~FsPE~Lg~ 151 (271)
.+|-.-+++|-+.+|-|+++.++ +-.+.+||=-|+. ++|+.|..+=++||-|=-
T Consensus 89 gInf~hI~~KT~~VLnP~r~~~q------------------~i~~d~DlaGPlv----f~L~f~~flLl~gKi~Fg---- 142 (249)
T KOG3103|consen 89 GINFDHIKQKTRAVLNPFRSADQ------------------SIMKDTDLAGPLV----FCLLFGLFLLLAGKIHFG---- 142 (249)
T ss_pred CCCHHHHHHHHhheecccccCce------------------EEecCcccccchH----HHHHHHHHHHhcCceEEE----
Confidence 57778899999999999988741 1236789988965 455666666667764411
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCCCcceeeeecccchhhHHHHHHHHHhh---hhH-H---HHHHHHHHHHHHHHH
Q 024172 152 LFIKGLFGWFMQFMLLKVTLLSLGSGEAPLLDVVAYAGYTFTGLCLAVLGRIVF---SYS-Y---YFLILWMCMCMGVFL 224 (271)
Q Consensus 152 ~~s~~l~~~~lEv~ilk~~~Y~l~~~~~~~lDlvAysGYKyv~i~~~ll~~l~~---~~~-y---y~~~ly~~~a~~~Fl 224 (271)
....++++-.+.+-..+-+++.+++++-...+..||.+.++++.-..+++. +.+ | -+..+|+..|.+-++
T Consensus 143 ---yIygi~~~gsl~iy~L~nlm~~~nv~f~~~aSVlGYcLLPlvvlS~v~i~~~~~g~vg~il~~~~v~W~t~aaS~lf 219 (249)
T KOG3103|consen 143 ---YIYGISLLGSLSIYFLLNLMSNKNVSFGCVASVLGYCLLPLVVLSFVNIFVGLQGTVGYILSALFVLWCTYAASKLF 219 (249)
T ss_pred ---EEeeeHHHHHHHHHHHHHHHhhcCcceeeehHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHH
Confidence 122344444444444445555688999999999999999999887776663 222 2 245577777766555
Q ss_pred HH
Q 024172 225 VK 226 (271)
Q Consensus 225 ~R 226 (271)
++
T Consensus 220 v~ 221 (249)
T KOG3103|consen 220 VS 221 (249)
T ss_pred HH
Confidence 55
No 8
>KOG2946 consensus Uncharacterized conserved protein [Function unknown]
Probab=91.96 E-value=6 Score=36.55 Aligned_cols=103 Identities=22% Similarity=0.324 Sum_probs=65.5
Q ss_pred ChHHHHHhhceeeccccccCCceeeecCCCCccCCCCCccCCCCCCcccchhHHHHHHHHHHHHhhhcCCCChhhHHHHH
Q 024172 74 NDQYVRNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAPDLYIPFMAFGTYVVLAGFTLGLQGKFTPEALNWLF 153 (271)
Q Consensus 74 dnsYV~~KL~lllFPf~hk~~W~R~~e~~~g~~~~~pPr~DinAPDLYIPlMafvTYILL~g~~~G~~g~FsPE~Lg~~~ 153 (271)
|-.-|..|++.+++|--.. |+.+. - +..=||.-|+--.+- .|+++-..+.++-. ..+
T Consensus 70 D~~~I~~kl~~Vl~P~py~-------~dk~~-----~----lRDwDlWGPl~~~~~----la~iL~~s~~~~~~---~vF 126 (234)
T KOG2946|consen 70 DLRAIGSKLKHVLYPHPYF-------EDKGQ-----L----LRDWDLWGPLFFCVF----LALILSLSGSVKSA---SVF 126 (234)
T ss_pred HHHHHHhceEEEEccCCCc-------ccccc-----e----eecccccchhHHHHH----HHHHHHhhcCcccc---hhH
Confidence 4556788999999997433 11110 0 122388888753332 23333333333322 446
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCCcceeeeecccchhhHHHHHH
Q 024172 154 IKGLFGWFMQFMLLKVTLLSLGSGEAPLLDVVAYAGYTFTGLCLAVL 200 (271)
Q Consensus 154 s~~l~~~~lEv~ilk~~~Y~l~~~~~~~lDlvAysGYKyv~i~~~ll 200 (271)
++.++++.+-.+++.+-.-+++ +++++..-++..||--.+..++.+
T Consensus 127 s~vf~i~wfG~~vvtln~kLLG-gnIs~fQsl~IlGYCLfPl~v~al 172 (234)
T KOG2946|consen 127 AVVFAILWFGAVVVTLNIKLLG-GNISFFQSLCILGYCLFPLVVAAL 172 (234)
T ss_pred HHHHHHHHHHHHHHHHHHHHhC-CceeEEeehhhhhhcccHHHHHHH
Confidence 6667777766666666667777 789999999999999999887753
No 9
>KOG3472 consensus Predicted small membrane protein [Function unknown]
Probab=50.42 E-value=8.2 Score=31.89 Aligned_cols=53 Identities=26% Similarity=0.520 Sum_probs=40.0
Q ss_pred chhhhchHHhhHHHHHhhhhHHHHhhhhhhccCCcceeeeChHH-HHHhhceeeccccccCCce
Q 024172 34 SGLIRGGLGAYGEKILGSSSEYVQSNISRYFSDPQYYFQVNDQY-VRNKLKVVLFPFLHRGHWT 96 (271)
Q Consensus 34 ~~~~~~g~~~yG~~~~~~g~~yvq~n~~~y~~~lkyYF~VdnsY-V~~KL~lllFPf~hk~~W~ 96 (271)
||.+.-|+|+||...+.+-+++=+++ .||+-|.| ..+-+.++-.|-.+|..|+
T Consensus 13 sGa~AlglgaYgahvlk~~pd~~~~~----------~~dtA~~yh~~HSlAlma~P~~~~p~~t 66 (112)
T KOG3472|consen 13 SGAAALGLGAYGAHVLKDVPDPKELK----------SWDTANRYHFLHSLALMAVPVARKPLWT 66 (112)
T ss_pred hhHHHHhhhhhhhhhhhcCCCHHHHH----------HHHHHHHHHHHHHHHHHcCccccCcchh
Confidence 56667789999999887666664433 26777777 4678888899999998787
No 10
>KOG2568 consensus Predicted membrane protein [Function unknown]
Probab=47.70 E-value=3.4e+02 Score=28.17 Aligned_cols=137 Identities=11% Similarity=0.029 Sum_probs=73.8
Q ss_pred chhHH-----HHHHHHHHHHhhhcCCCChhhHHHHHHHHHHHHH--HHHHHHHHHHHhccCCCCCcceee-----eeccc
Q 024172 123 PFMAF-----GTYVVLAGFTLGLQGKFTPEALNWLFIKGLFGWF--MQFMLLKVTLLSLGSGEAPLLDVV-----AYAGY 190 (271)
Q Consensus 123 PlMaf-----vTYILL~g~~~G~~g~FsPE~Lg~~~s~~l~~~~--lEv~ilk~~~Y~l~~~~~~~lDlv-----AysGY 190 (271)
|+|-| +.|+|+..+..=..=+|--|+|-.+-.-..++.+ +|.++...=....|+...+..++. .-++=
T Consensus 201 Plm~fy~~m~laYvllgllW~~~~~~y~~diL~lQ~~I~~Vi~lgm~E~av~y~~y~~~N~tG~~~~~~~~~a~i~sa~K 280 (518)
T KOG2568|consen 201 PLMPFYGFMCLAYVLLGLLWFFQCAQYWHDILPLQKYITAVIALGMAETAVFYSEYANFNSTGMSPKVYTVFASILSAIK 280 (518)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHH
Confidence 55655 4556665555555678899999877655544444 688887777666664322222110 01111
Q ss_pred chhhHHHHHHHHH----hh----hhH---HHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCccceeehhHHHHHHHHHH
Q 024172 191 TFTGLCLAVLGRI----VF----SYS---YYFLILWMCMCMGVFLVKTMKRVLFAEMRTHDSSRHHYLLIFIAFAQLPLF 259 (271)
Q Consensus 191 Kyv~i~~~ll~~l----~~----~~~---yy~~~ly~~~a~~~Fl~RtLk~~ll~e~~~~~~~r~~yfl~~ia~~Q~~l~ 259 (271)
|=..-.+.+++++ +. +.. --+-.+|+.+|-..+++|..... ....++-..++.+-.|+....++
T Consensus 281 ~Tlsr~LlLIVSlGYGIVkP~Lg~~l~rv~~ig~~~~i~s~i~~l~~~~g~~-----se~~~~~~lf~~ip~ai~d~~f~ 355 (518)
T KOG2568|consen 281 KTLSRLLLLIVSLGYGIVKPTLGGTLLRVCQIGVIYFIASEILGLARVIGNI-----SELSSLLILFAALPLAILDAAFI 355 (518)
T ss_pred HHHHHHHHHHHhcCcceEecCcchHHHHHHHHhHHHHHHHHHHHHHHHhcCc-----ccccchhhHHHHHHHHHHHHHHH
Confidence 1111111111111 10 011 12456777788888888866511 11223446677777789999888
Q ss_pred HHhhh
Q 024172 260 LWLGN 264 (271)
Q Consensus 260 ~wL~~ 264 (271)
+|...
T Consensus 356 ~wIF~ 360 (518)
T KOG2568|consen 356 YWIFI 360 (518)
T ss_pred HHHHH
Confidence 88654
No 11
>PF06679 DUF1180: Protein of unknown function (DUF1180); InterPro: IPR009565 This entry consists of several hypothetical eukaryotic proteins thought to be membrane proteins. Their function is unknown.
Probab=40.39 E-value=39 Score=29.70 Aligned_cols=26 Identities=15% Similarity=0.333 Sum_probs=21.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHH
Q 024172 206 SYSYYFLILWMCMCMGVFLVKTMKRV 231 (271)
Q Consensus 206 ~~~yy~~~ly~~~a~~~Fl~RtLk~~ 231 (271)
....|++...+++++.+|++|+.|..
T Consensus 95 ~R~~~Vl~g~s~l~i~yfvir~~R~r 120 (163)
T PF06679_consen 95 KRALYVLVGLSALAILYFVIRTFRLR 120 (163)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHhhc
Confidence 35568888889999999999999843
No 12
>PF12129 Phtf-FEM1B_bdg: Male germ-cell putative homeodomain transcription factor; InterPro: IPR021980 This domain is found in bacteria and eukaryotes, and is typically between 101 and 140 amino acids in length. Phtf proteins do not display any sequence similarity to known or predicted proteins, but their conservation among species suggests an essential function. The 84 kDa Phtf1 protein is an integral membrane protein, anchored to a cell membrane by six to eight trans-membrane domains, that is associated with a domain of the endoplasmic reticulum (ER) juxtaposed to the Golgi apparatus. It is present during meiosis and spermiogenesis, and, by the end of spermiogenesis, is released from the mature spermatozoon within the residual bodies []. Phtf1 enhances the binding of FEM1B -feminisation homologue 1B - to cell membranes. Fem-1 was initially identified in the signaling pathway for sex determination, as well as being implicated in apoptosis, but its biochemical role is still unclear, and neither FEM1B nor PHTF1 is directly implicated in apoptosis in spermatogenesis. It is the ANK domain of FEM1B that is necessary for the interaction with the N-terminal region of Phtf1 [].
Probab=33.08 E-value=20 Score=31.52 Aligned_cols=53 Identities=25% Similarity=0.509 Sum_probs=30.7
Q ss_pred HHhhHHHHHhhhhHHHHhhhhhhc------cCCcc-eeeeC---------------hHHHHHh--hceeeccccccCCce
Q 024172 41 LGAYGEKILGSSSEYVQSNISRYF------SDPQY-YFQVN---------------DQYVRNK--LKVVLFPFLHRGHWT 96 (271)
Q Consensus 41 ~~~yG~~~~~~g~~yvq~n~~~y~------~~lky-YF~Vd---------------nsYV~~K--L~lllFPf~hk~~W~ 96 (271)
.|+|.|..++.+=|. +.+...- ..+|. .=||| -..|.+| +|.++|||..+ +|.
T Consensus 14 ig~YD~q~WEksveq--~~l~gl~~~~kk~~~lk~dLIDvDLVRGStF~KAKP~~~~~~l~~kgl~R~lf~P~~~~-WW~ 90 (159)
T PF12129_consen 14 IGAYDQQIWEKSVEQ--RELKGLTNKPKKTGHLKPDLIDVDLVRGSTFPKAKPESPWTSLTRKGLVRVLFFPFFSQ-WWI 90 (159)
T ss_pred HhhhHHHHHHHHHHH--HHhcccccCCcccCCCChhheeeeeeeeecccccCCcchhhHHHHHHHHHHHHHHHHHH-HHH
Confidence 468999998887653 4443331 12322 22333 1234443 67889999888 686
No 13
>PF05512 AWPM-19: AWPM-19-like family; InterPro: IPR008390 Members of this family are 19 kDa membrane proteins. The levels of the plant protein AWPM-19 increase dramatically when there is an increase level of abscisic acid. The increase presence of this protein leads to greater tolerance of freezing [].
Probab=31.98 E-value=1.1e+02 Score=26.42 Aligned_cols=53 Identities=19% Similarity=0.351 Sum_probs=42.6
Q ss_pred chhHHHHHHHHHHHH------hhhcC--CCChhhHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 024172 123 PFMAFGTYVVLAGFT------LGLQG--KFTPEALNWLFIKGLFGWFMQFMLLKVTLLSLG 175 (271)
Q Consensus 123 PlMafvTYILL~g~~------~G~~g--~FsPE~Lg~~~s~~l~~~~lEv~ilk~~~Y~l~ 175 (271)
..--|++|.|++|+. .|++. ..++|-|...++.+++.|.+-.+..-++|-=..
T Consensus 49 AT~ffv~faLlAgVVG~aS~l~G~~h~r~W~~~sLaaAaa~a~iAW~lTlLAmGlACKeI~ 109 (142)
T PF05512_consen 49 ATGFFVIFALLAGVVGAASVLAGLHHVRSWRSESLAAAAASALIAWALTLLAMGLACKEIH 109 (142)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhHHHHhhcCccchHHHHHHHHHHHHHHHHHHHHhHheee
Confidence 356688888888764 45544 488999999999999999999999888887553
No 14
>KOG1924 consensus RhoA GTPase effector DIA/Diaphanous [Signal transduction mechanisms; Cytoskeleton]
Probab=27.82 E-value=45 Score=36.38 Aligned_cols=7 Identities=29% Similarity=0.330 Sum_probs=3.1
Q ss_pred HHHhhce
Q 024172 78 VRNKLKV 84 (271)
Q Consensus 78 V~~KL~l 84 (271)
...||.+
T Consensus 658 lfakL~~ 664 (1102)
T KOG1924|consen 658 LFAKLAL 664 (1102)
T ss_pred HHHHHHH
Confidence 4444444
No 15
>KOG2675 consensus Adenylate cyclase-associated protein (CAP/Srv2p) [Cytoskeleton; Signal transduction mechanisms]
Probab=23.49 E-value=85 Score=31.96 Aligned_cols=14 Identities=36% Similarity=0.826 Sum_probs=6.3
Q ss_pred CCCCCCCCCCCCCC
Q 024172 12 GMPRPAADAQPNPF 25 (271)
Q Consensus 12 ~~~~~~~~~~~~~~ 25 (271)
++|.||+.|+|+||
T Consensus 235 ~PPPPPP~PPp~~~ 248 (480)
T KOG2675|consen 235 APPPPPPAPPPAPF 248 (480)
T ss_pred CCCCCCCCCCCccc
Confidence 33334443445555
No 16
>CHL00105 psaJ photosystem I subunit IX
Probab=20.39 E-value=79 Score=22.00 Aligned_cols=26 Identities=31% Similarity=0.597 Sum_probs=20.8
Q ss_pred chhHHHHHHHHHHHHhhhcCCCChhhH
Q 024172 123 PFMAFGTYVVLAGFTLGLQGKFTPEAL 149 (271)
Q Consensus 123 PlMafvTYILL~g~~~G~~g~FsPE~L 149 (271)
|+++.+-..+++|+...+ +||-||.|
T Consensus 12 PVla~~w~~~tag~lIEi-NRffPD~L 37 (42)
T CHL00105 12 PVLSTLWFGFLAGLLIEI-NRFFPDAL 37 (42)
T ss_pred hHHHHHHHHHHHHHHHHH-HHhCChhh
Confidence 788888888888887766 57778876
No 17
>PRK02733 photosystem I reaction center subunit IX; Provisional
Probab=20.33 E-value=83 Score=21.92 Aligned_cols=27 Identities=26% Similarity=0.402 Sum_probs=21.2
Q ss_pred chhHHHHHHHHHHHHhhhcCCCChhhHH
Q 024172 123 PFMAFGTYVVLAGFTLGLQGKFTPEALN 150 (271)
Q Consensus 123 PlMafvTYILL~g~~~G~~g~FsPE~Lg 150 (271)
|+++.+-..+++|+...+ +||-||.|.
T Consensus 12 PVla~~w~~~tag~lIEi-NRffPD~L~ 38 (42)
T PRK02733 12 PVVAAIWLTLTAGILIEF-NRFFPDLLF 38 (42)
T ss_pred hHHHHHHHHHHHHHHHHH-HHhCchHhc
Confidence 788888888888887776 577788763
No 18
>PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A ....
Probab=20.18 E-value=1.8e+02 Score=24.31 Aligned_cols=23 Identities=4% Similarity=0.083 Sum_probs=12.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHH
Q 024172 206 SYSYYFLILWMCMCMGVFLVKTMK 229 (271)
Q Consensus 206 ~~~yy~~~ly~~~a~~~Fl~RtLk 229 (271)
+...+.++.++-+.+ .|..|+.+
T Consensus 91 ~T~~F~~lv~~q~~~-~~~~r~~~ 113 (182)
T PF00689_consen 91 QTMAFTALVLSQLFN-AFNCRSRR 113 (182)
T ss_dssp HHHHHHHHHHHHHHH-HHHTSSSS
T ss_pred HHHHHHHHHHHHHhh-hccccccc
Confidence 445555555555554 35566544
Done!