Query 024173
Match_columns 271
No_of_seqs 27 out of 29
Neff 2.1
Searched_HMMs 29240
Date Mon Mar 25 03:38:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024173.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024173hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3h2b_A SAM-dependent methyltra 98.0 1E-05 3.5E-10 62.1 6.0 136 101-243 42-178 (203)
2 3lcc_A Putative methyl chlorid 97.8 9.5E-05 3.2E-09 58.3 8.5 129 102-241 68-201 (235)
3 3e23_A Uncharacterized protein 97.7 4.1E-05 1.4E-09 59.2 5.3 131 102-242 45-177 (211)
4 3jwg_A HEN1, methyltransferase 97.6 9.6E-05 3.3E-09 57.4 6.5 99 101-202 30-140 (219)
5 2yqz_A Hypothetical protein TT 97.6 4.1E-05 1.4E-09 60.3 4.5 134 101-241 40-190 (263)
6 2p8j_A S-adenosylmethionine-de 97.6 2.5E-05 8.6E-10 59.7 2.9 155 86-243 11-179 (209)
7 1xtp_A LMAJ004091AAA; SGPP, st 97.6 6E-05 2E-09 59.3 4.9 139 100-243 93-234 (254)
8 3jwh_A HEN1; methyltransferase 97.6 0.00019 6.4E-09 55.9 7.6 100 102-204 31-142 (217)
9 3cgg_A SAM-dependent methyltra 97.6 0.00023 7.8E-09 52.8 7.7 122 100-241 46-169 (195)
10 2ex4_A Adrenal gland protein A 97.6 5.9E-05 2E-09 59.9 4.4 138 101-243 80-221 (241)
11 3dli_A Methyltransferase; PSI- 97.5 0.00023 7.9E-09 56.4 7.4 133 102-241 43-178 (240)
12 3cc8_A Putative methyltransfer 97.4 0.00031 1.1E-08 53.6 6.4 134 100-241 32-179 (230)
13 3hnr_A Probable methyltransfer 97.4 0.00049 1.7E-08 53.1 7.4 137 100-241 45-195 (220)
14 3f4k_A Putative methyltransfer 97.4 0.00043 1.5E-08 54.7 7.0 133 102-240 48-189 (257)
15 1xxl_A YCGJ protein; structura 97.4 0.0015 5.1E-08 52.1 10.2 148 89-240 10-167 (239)
16 3dlc_A Putative S-adenosyl-L-m 97.4 0.00059 2E-08 51.7 7.4 111 90-203 33-148 (219)
17 3g5l_A Putative S-adenosylmeth 97.3 0.00012 4.2E-09 58.0 3.5 108 90-202 33-144 (253)
18 3ujc_A Phosphoethanolamine N-m 97.3 0.0001 3.4E-09 58.0 2.6 136 101-241 56-200 (266)
19 3ou2_A SAM-dependent methyltra 97.2 0.00079 2.7E-08 51.3 6.6 94 102-203 48-146 (218)
20 3l8d_A Methyltransferase; stru 97.2 0.001 3.5E-08 51.9 7.1 149 88-243 42-196 (242)
21 4htf_A S-adenosylmethionine-de 97.1 0.0028 9.6E-08 51.4 9.6 139 96-240 64-225 (285)
22 2p7i_A Hypothetical protein; p 97.1 0.0024 8.2E-08 49.1 8.7 95 102-203 44-141 (250)
23 3dh0_A SAM dependent methyltra 97.0 0.0014 4.7E-08 50.5 6.4 130 102-241 39-175 (219)
24 3d2l_A SAM-dependent methyltra 97.0 0.0014 4.9E-08 50.9 6.5 97 102-202 35-136 (243)
25 3sm3_A SAM-dependent methyltra 97.0 0.0013 4.3E-08 50.6 6.1 99 101-203 31-141 (235)
26 3ccf_A Cyclopropane-fatty-acyl 97.0 0.0031 1E-07 51.2 8.2 134 101-241 58-204 (279)
27 3dtn_A Putative methyltransfer 96.9 0.0014 4.8E-08 51.2 5.7 100 100-203 44-148 (234)
28 1vl5_A Unknown conserved prote 96.9 0.0044 1.5E-07 49.5 8.6 134 100-240 37-183 (260)
29 1kpg_A CFA synthase;, cyclopro 96.9 0.0029 1E-07 51.2 7.6 96 102-203 66-168 (287)
30 3vc1_A Geranyl diphosphate 2-C 96.8 0.0019 6.5E-08 53.8 6.2 135 101-240 118-262 (312)
31 3bus_A REBM, methyltransferase 96.8 0.0068 2.3E-07 48.4 9.2 148 91-241 51-210 (273)
32 1y8c_A S-adenosylmethionine-de 96.8 0.003 1E-07 48.8 6.8 103 97-202 34-141 (246)
33 3m70_A Tellurite resistance pr 96.7 0.0023 8E-08 51.9 5.9 103 101-206 121-226 (286)
34 2i62_A Nicotinamide N-methyltr 96.7 0.0031 1.1E-07 49.6 6.1 135 101-243 57-235 (265)
35 2fk8_A Methoxy mycolic acid sy 96.7 0.0072 2.5E-07 50.0 8.5 136 101-242 91-249 (318)
36 3ege_A Putative methyltransfer 96.6 0.0044 1.5E-07 50.1 6.8 129 100-240 34-171 (261)
37 3pfg_A N-methyltransferase; N, 96.6 0.0052 1.8E-07 49.1 7.0 112 85-202 36-150 (263)
38 2yxd_A Probable cobalt-precorr 96.6 0.0022 7.4E-08 47.2 4.3 109 101-219 36-148 (183)
39 3bxo_A N,N-dimethyltransferase 96.6 0.0053 1.8E-07 47.5 6.7 110 88-203 29-141 (239)
40 4gek_A TRNA (CMO5U34)-methyltr 96.5 0.013 4.4E-07 49.2 9.4 116 84-202 54-177 (261)
41 2o57_A Putative sarcosine dime 96.5 0.011 3.9E-07 48.0 8.4 138 100-241 82-228 (297)
42 3bkw_A MLL3908 protein, S-aden 96.5 0.0031 1.1E-07 49.0 4.9 98 101-203 44-144 (243)
43 2r3s_A Uncharacterized protein 96.5 0.015 5E-07 48.1 9.2 147 92-243 154-319 (335)
44 1ri5_A MRNA capping enzyme; me 96.5 0.015 5E-07 46.5 8.8 106 95-203 59-174 (298)
45 2xvm_A Tellurite resistance pr 96.5 0.0043 1.5E-07 46.6 5.3 111 84-203 22-136 (199)
46 3hm2_A Precorrin-6Y C5,15-meth 96.4 0.0088 3E-07 44.3 6.9 100 100-205 25-129 (178)
47 3bkx_A SAM-dependent methyltra 96.4 0.075 2.6E-06 42.4 12.5 139 101-241 44-213 (275)
48 2ip2_A Probable phenazine-spec 96.4 0.023 8E-07 47.4 9.7 149 90-242 157-317 (334)
49 3kkz_A Uncharacterized protein 96.3 0.0068 2.3E-07 48.7 6.2 133 101-240 47-189 (267)
50 1vlm_A SAM-dependent methyltra 96.3 0.049 1.7E-06 42.6 10.9 140 89-242 38-183 (219)
51 1nkv_A Hypothetical protein YJ 96.3 0.0096 3.3E-07 46.9 6.9 97 102-202 38-139 (256)
52 3g2m_A PCZA361.24; SAM-depende 96.3 0.0078 2.7E-07 49.5 6.5 104 95-203 77-190 (299)
53 2zfu_A Nucleomethylin, cerebra 96.3 0.011 3.7E-07 45.7 6.9 107 101-243 68-175 (215)
54 1qzz_A RDMB, aclacinomycin-10- 96.3 0.0074 2.5E-07 51.0 6.4 144 91-242 172-334 (374)
55 1ve3_A Hypothetical protein PH 96.3 0.0071 2.4E-07 46.5 5.6 114 87-203 26-142 (227)
56 3ofk_A Nodulation protein S; N 96.2 0.0063 2.2E-07 46.9 5.3 111 88-203 38-154 (216)
57 1tw3_A COMT, carminomycin 4-O- 96.2 0.017 5.7E-07 48.8 8.1 147 91-242 173-334 (360)
58 3mcz_A O-methyltransferase; ad 96.1 0.023 7.8E-07 47.8 8.3 140 101-243 180-335 (352)
59 3i9f_A Putative type 11 methyl 96.1 0.0094 3.2E-07 44.3 5.3 94 101-203 18-112 (170)
60 2g72_A Phenylethanolamine N-me 96.0 0.014 4.8E-07 47.7 6.6 136 101-243 72-252 (289)
61 2pxx_A Uncharacterized protein 96.0 0.0042 1.4E-07 47.0 3.2 102 100-203 42-159 (215)
62 2gs9_A Hypothetical protein TT 96.0 0.047 1.6E-06 41.8 9.1 128 100-235 36-170 (211)
63 3bzb_A Uncharacterized protein 96.0 0.013 4.5E-07 48.9 6.3 135 102-238 81-248 (281)
64 2avn_A Ubiquinone/menaquinone 95.9 0.015 5E-07 46.9 6.1 107 90-203 45-152 (260)
65 3dp7_A SAM-dependent methyltra 95.9 0.079 2.7E-06 45.6 10.9 147 91-243 170-338 (363)
66 3g5t_A Trans-aconitate 3-methy 95.9 0.013 4.4E-07 48.2 5.7 105 93-201 29-147 (299)
67 2p35_A Trans-aconitate 2-methy 95.8 0.027 9.3E-07 44.2 7.3 134 100-240 33-183 (259)
68 3iv6_A Putative Zn-dependent a 95.8 0.011 3.7E-07 51.0 5.4 102 102-206 47-151 (261)
69 1yzh_A TRNA (guanine-N(7)-)-me 95.8 0.048 1.6E-06 42.6 8.4 123 93-219 34-173 (214)
70 2qe6_A Uncharacterized protein 95.7 0.039 1.3E-06 46.4 8.2 137 100-243 77-238 (274)
71 2kw5_A SLR1183 protein; struct 95.6 0.039 1.3E-06 42.0 7.3 95 103-203 32-131 (202)
72 3e8s_A Putative SAM dependent 95.6 0.015 5.2E-07 44.1 4.8 135 102-243 54-205 (227)
73 3gu3_A Methyltransferase; alph 95.5 0.031 1E-06 45.9 6.8 98 101-202 23-125 (284)
74 3mgg_A Methyltransferase; NYSG 95.4 0.025 8.6E-07 45.3 5.8 96 101-202 38-141 (276)
75 3m33_A Uncharacterized protein 95.4 0.091 3.1E-06 41.5 8.7 93 99-202 47-141 (226)
76 3hem_A Cyclopropane-fatty-acyl 95.3 0.042 1.4E-06 45.2 7.0 135 101-241 73-237 (302)
77 1dus_A MJ0882; hypothetical pr 95.3 0.028 9.7E-07 41.4 5.2 105 100-208 52-162 (194)
78 3bgv_A MRNA CAP guanine-N7 met 95.2 0.029 1E-06 46.5 5.6 103 101-203 35-155 (313)
79 3grz_A L11 mtase, ribosomal pr 95.2 0.03 1E-06 43.1 5.2 100 101-208 61-164 (205)
80 3gwz_A MMCR; methyltransferase 95.1 0.23 7.9E-06 42.8 11.3 149 89-243 190-352 (369)
81 4hg2_A Methyltransferase type 95.1 0.023 7.8E-07 47.9 4.8 102 91-204 31-136 (257)
82 3i53_A O-methyltransferase; CO 95.1 0.095 3.2E-06 43.9 8.5 147 90-242 158-316 (332)
83 3lst_A CALO1 methyltransferase 94.8 0.09 3.1E-06 44.7 7.7 148 91-243 174-332 (348)
84 1x19_A CRTF-related protein; m 94.7 0.65 2.2E-05 39.4 12.7 147 90-242 179-343 (359)
85 1ej0_A FTSJ; methyltransferase 94.6 0.046 1.6E-06 39.2 4.7 101 100-208 22-141 (180)
86 1fp2_A Isoflavone O-methyltran 94.6 0.065 2.2E-06 45.6 6.3 135 100-243 188-337 (352)
87 3htx_A HEN1; HEN1, small RNA m 94.4 0.085 2.9E-06 54.5 7.9 105 100-206 721-836 (950)
88 4e2x_A TCAB9; kijanose, tetron 94.4 0.0052 1.8E-07 53.2 -0.8 130 101-241 108-247 (416)
89 3ggd_A SAM-dependent methyltra 94.3 0.028 9.4E-07 44.3 3.3 100 101-203 57-163 (245)
90 1wzn_A SAM-dependent methyltra 94.2 0.093 3.2E-06 41.3 6.0 99 101-202 42-144 (252)
91 3ocj_A Putative exported prote 94.1 0.21 7.2E-06 41.3 8.3 138 100-241 118-285 (305)
92 1fp1_D Isoliquiritigenin 2'-O- 94.1 0.12 4E-06 44.4 6.9 144 90-242 197-355 (372)
93 4fsd_A Arsenic methyltransfera 94.0 0.13 4.5E-06 44.7 7.1 140 100-241 83-245 (383)
94 2aot_A HMT, histamine N-methyl 93.9 0.064 2.2E-06 44.2 4.7 149 89-241 39-215 (292)
95 1ne2_A Hypothetical protein TA 93.7 0.12 4E-06 39.7 5.6 99 100-208 51-151 (200)
96 3g07_A 7SK snRNA methylphospha 93.1 0.056 1.9E-06 45.0 3.2 105 101-205 47-222 (292)
97 3thr_A Glycine N-methyltransfe 93.1 0.058 2E-06 43.6 3.1 99 102-202 59-174 (293)
98 3lbf_A Protein-L-isoaspartate 92.7 0.15 5.1E-06 39.2 4.8 98 100-207 77-178 (210)
99 1l3i_A Precorrin-6Y methyltran 92.5 0.11 3.9E-06 38.1 3.8 99 100-205 33-136 (192)
100 1fbn_A MJ fibrillarin homologu 92.4 0.15 5.2E-06 40.5 4.6 95 102-202 76-177 (230)
101 3q87_B N6 adenine specific DNA 92.1 0.5 1.7E-05 36.1 7.1 93 102-204 25-124 (170)
102 3p9n_A Possible methyltransfer 91.9 0.25 8.5E-06 37.7 5.2 114 89-203 33-153 (189)
103 1p91_A Ribosomal RNA large sub 91.9 0.4 1.4E-05 38.3 6.5 93 99-203 84-178 (269)
104 2a14_A Indolethylamine N-methy 91.6 0.11 3.8E-06 42.3 3.1 87 150-242 138-233 (263)
105 1yb2_A Hypothetical protein TA 91.6 0.24 8.2E-06 40.6 5.1 96 102-206 112-214 (275)
106 1pjz_A Thiopurine S-methyltran 91.6 0.31 1E-05 38.4 5.5 125 102-240 24-169 (203)
107 3mti_A RRNA methylase; SAM-dep 91.5 0.32 1.1E-05 36.6 5.3 101 102-208 24-140 (185)
108 1vbf_A 231AA long hypothetical 91.0 0.28 9.4E-06 38.2 4.7 94 101-206 71-168 (231)
109 1zx0_A Guanidinoacetate N-meth 90.6 0.22 7.7E-06 39.4 3.9 104 100-205 60-172 (236)
110 1zg3_A Isoflavanone 4'-O-methy 89.9 0.36 1.2E-05 41.1 4.9 132 100-242 193-342 (358)
111 1inl_A Spermidine synthase; be 89.7 0.29 9.8E-06 41.7 4.0 119 84-206 77-209 (296)
112 2nxc_A L11 mtase, ribosomal pr 89.5 0.34 1.2E-05 39.7 4.2 96 101-207 121-222 (254)
113 2esr_A Methyltransferase; stru 89.4 0.078 2.7E-06 39.7 0.3 104 101-207 32-142 (177)
114 2ld4_A Anamorsin; methyltransf 89.0 0.38 1.3E-05 36.1 3.9 81 148-239 44-128 (176)
115 2pt6_A Spermidine synthase; tr 88.9 0.24 8.1E-06 43.0 3.0 117 84-206 103-234 (321)
116 1mjf_A Spermidine synthase; sp 88.9 0.19 6.5E-06 42.2 2.4 115 85-206 63-197 (281)
117 2fpo_A Methylase YHHF; structu 88.8 0.14 4.7E-06 40.3 1.4 104 102-208 56-165 (202)
118 3eey_A Putative rRNA methylase 88.8 1.5 5.3E-05 33.1 7.1 108 100-207 22-143 (197)
119 2b3t_A Protein methyltransfera 88.7 0.98 3.4E-05 36.9 6.4 71 100-172 109-183 (276)
120 3mb5_A SAM-dependent methyltra 88.5 0.69 2.3E-05 36.6 5.2 110 101-219 94-211 (255)
121 3adn_A Spermidine synthase; am 88.4 0.81 2.8E-05 39.4 6.0 121 79-203 65-198 (294)
122 3reo_A (ISO)eugenol O-methyltr 88.3 1.5 5.1E-05 38.0 7.6 144 91-243 192-351 (368)
123 2yxe_A Protein-L-isoaspartate 88.2 0.32 1.1E-05 37.4 3.0 96 102-206 79-180 (215)
124 3e05_A Precorrin-6Y C5,15-meth 88.1 1.4 4.7E-05 33.8 6.6 100 100-205 40-144 (204)
125 2gb4_A Thiopurine S-methyltran 88.0 0.42 1.4E-05 39.9 3.8 99 101-203 69-191 (252)
126 2ift_A Putative methylase HI07 87.8 0.33 1.1E-05 38.1 2.9 103 102-207 55-167 (201)
127 1jg1_A PIMT;, protein-L-isoasp 87.7 0.69 2.3E-05 36.7 4.7 94 102-205 93-191 (235)
128 2o07_A Spermidine synthase; st 87.4 0.42 1.4E-05 41.1 3.6 125 85-215 83-222 (304)
129 1jsx_A Glucose-inhibited divis 87.4 0.86 2.9E-05 34.7 5.0 107 102-217 67-178 (207)
130 2pjd_A Ribosomal RNA small sub 87.4 0.36 1.2E-05 41.3 3.2 100 102-204 198-304 (343)
131 3dmg_A Probable ribosomal RNA 86.8 0.86 2.9E-05 40.7 5.4 122 83-206 216-343 (381)
132 3opn_A Putative hemolysin; str 86.5 0.15 5E-06 42.2 0.3 127 102-240 39-177 (232)
133 3njr_A Precorrin-6Y methylase; 86.5 0.82 2.8E-05 36.2 4.6 95 102-205 57-156 (204)
134 1ws6_A Methyltransferase; stru 86.5 0.3 1E-05 35.6 1.9 103 101-208 42-152 (171)
135 2y1w_A Histone-arginine methyl 86.4 1.9 6.4E-05 37.2 7.1 95 102-202 52-154 (348)
136 2fca_A TRNA (guanine-N(7)-)-me 86.4 1.1 3.6E-05 35.6 5.2 124 93-219 31-170 (213)
137 2yvl_A TRMI protein, hypotheti 86.2 2.6 8.8E-05 32.8 7.2 93 101-205 92-192 (248)
138 1r18_A Protein-L-isoaspartate( 86.2 0.82 2.8E-05 35.9 4.4 95 102-205 86-196 (227)
139 1iy9_A Spermidine synthase; ro 86.0 0.92 3.2E-05 38.1 4.9 116 85-206 63-193 (275)
140 3evz_A Methyltransferase; NYSG 85.7 1.1 3.7E-05 34.8 4.8 74 99-172 54-130 (230)
141 1uir_A Polyamine aminopropyltr 85.4 0.34 1.2E-05 41.5 2.0 117 84-206 64-199 (314)
142 3r0q_C Probable protein argini 85.4 1.2 4E-05 39.0 5.4 94 102-202 65-168 (376)
143 2bm8_A Cephalosporin hydroxyla 85.2 1.3 4.4E-05 36.1 5.3 93 102-203 83-187 (236)
144 2b2c_A Spermidine synthase; be 85.0 0.81 2.8E-05 39.8 4.2 117 84-206 95-226 (314)
145 2pbf_A Protein-L-isoaspartate 84.7 0.63 2.2E-05 36.2 3.1 96 102-205 82-195 (227)
146 1wy7_A Hypothetical protein PH 84.5 1.2 4.3E-05 33.9 4.6 90 101-194 50-141 (207)
147 2pwy_A TRNA (adenine-N(1)-)-me 84.4 0.86 2.9E-05 35.8 3.7 95 101-203 97-198 (258)
148 1g8a_A Fibrillarin-like PRE-rR 84.4 0.62 2.1E-05 36.3 2.9 96 102-202 75-177 (227)
149 1uwv_A 23S rRNA (uracil-5-)-me 84.4 1.1 3.7E-05 40.1 4.8 107 102-219 288-405 (433)
150 1i9g_A Hypothetical protein RV 83.4 1.2 4.1E-05 35.7 4.3 94 102-203 101-203 (280)
151 2ipx_A RRNA 2'-O-methyltransfe 83.4 0.95 3.3E-05 35.7 3.6 99 102-205 79-184 (233)
152 1i1n_A Protein-L-isoaspartate 83.3 1.5 5.1E-05 34.1 4.6 97 101-206 78-185 (226)
153 2vdv_E TRNA (guanine-N(7)-)-me 83.3 1.4 4.8E-05 35.4 4.6 117 100-220 49-191 (246)
154 3dxy_A TRNA (guanine-N(7)-)-me 83.0 1.8 6.3E-05 34.9 5.3 112 93-207 27-154 (218)
155 2qm3_A Predicted methyltransfe 82.5 2.4 8.1E-05 36.9 6.1 101 101-208 173-285 (373)
156 2b25_A Hypothetical protein; s 81.8 2 6.9E-05 36.1 5.2 109 102-217 107-234 (336)
157 3p9c_A Caffeic acid O-methyltr 81.7 8.1 0.00028 33.4 9.1 145 91-243 190-349 (364)
158 2i7c_A Spermidine synthase; tr 81.6 1.2 4.1E-05 37.5 3.8 114 84-203 65-192 (283)
159 1o9g_A RRNA methyltransferase; 81.0 1.2 4.1E-05 35.6 3.4 106 100-205 51-216 (250)
160 3mq2_A 16S rRNA methyltransfer 81.0 2.4 8.3E-05 32.7 5.0 101 100-202 27-139 (218)
161 1nt2_A Fibrillarin-like PRE-rR 80.7 1.6 5.4E-05 35.0 4.0 94 102-202 59-160 (210)
162 1o54_A SAM-dependent O-methylt 80.5 3.6 0.00012 33.5 6.1 94 102-204 114-214 (277)
163 2vdw_A Vaccinia virus capping 79.6 1 3.4E-05 38.5 2.7 102 102-203 50-169 (302)
164 2fhp_A Methylase, putative; al 79.4 0.57 2E-05 34.7 1.0 104 101-207 45-158 (187)
165 3tfw_A Putative O-methyltransf 78.8 2.3 7.9E-05 34.4 4.5 115 83-203 48-170 (248)
166 3gdh_A Trimethylguanosine synt 78.3 2.1 7E-05 33.6 3.9 96 102-202 80-180 (241)
167 3q7e_A Protein arginine N-meth 78.1 4.2 0.00014 35.1 6.2 96 102-201 68-171 (349)
168 4dzr_A Protein-(glutamine-N5) 77.8 1.9 6.4E-05 32.2 3.4 72 100-171 30-107 (215)
169 3hp7_A Hemolysin, putative; st 77.3 2 6.7E-05 37.9 3.9 127 102-240 87-225 (291)
170 2fyt_A Protein arginine N-meth 77.2 4.8 0.00016 34.7 6.3 95 102-200 66-168 (340)
171 3ntv_A MW1564 protein; rossman 76.0 1.6 5.5E-05 34.8 2.8 98 101-202 72-175 (232)
172 2gpy_A O-methyltransferase; st 75.5 1.6 5.5E-05 34.3 2.6 97 102-202 56-159 (233)
173 3lpm_A Putative methyltransfer 75.5 3.7 0.00013 33.2 4.8 119 101-219 50-192 (259)
174 3u81_A Catechol O-methyltransf 73.8 3 0.0001 32.7 3.8 101 101-203 59-170 (221)
175 3tr6_A O-methyltransferase; ce 72.2 1.8 6.2E-05 33.4 2.1 120 81-207 47-180 (225)
176 1xdz_A Methyltransferase GIDB; 71.2 4.9 0.00017 31.9 4.5 95 101-202 71-173 (240)
177 1u2z_A Histone-lysine N-methyl 70.9 3.7 0.00013 38.1 4.2 99 101-202 243-358 (433)
178 2plw_A Ribosomal RNA methyltra 69.5 9.1 0.00031 28.8 5.5 99 101-207 23-158 (201)
179 1g6q_1 HnRNP arginine N-methyl 69.1 13 0.00046 31.6 7.0 95 102-200 40-142 (328)
180 3orh_A Guanidinoacetate N-meth 67.8 7.9 0.00027 31.1 5.1 101 100-203 60-170 (236)
181 2cmg_A Spermidine synthase; tr 66.4 7.4 0.00025 32.8 4.8 110 84-208 59-177 (262)
182 1xj5_A Spermidine synthase 1; 65.2 8.1 0.00028 33.9 5.0 116 84-205 107-238 (334)
183 4dcm_A Ribosomal RNA large sub 62.2 8.5 0.00029 34.0 4.6 103 102-206 224-337 (375)
184 1sui_A Caffeoyl-COA O-methyltr 62.0 8.9 0.0003 31.3 4.4 112 83-203 64-190 (247)
185 3ckk_A TRNA (guanine-N(7)-)-me 59.8 9.3 0.00032 31.2 4.2 118 98-219 44-185 (235)
186 2frn_A Hypothetical protein PH 59.2 12 0.00041 31.0 4.8 94 102-203 127-225 (278)
187 1dl5_A Protein-L-isoaspartate 58.1 15 0.0005 30.9 5.2 94 101-206 76-178 (317)
188 3bwc_A Spermidine synthase; SA 58.1 7.9 0.00027 32.8 3.6 115 85-205 83-213 (304)
189 2jjq_A Uncharacterized RNA met 58.1 13 0.00044 33.7 5.1 94 102-208 292-392 (425)
190 2yx1_A Hypothetical protein MJ 56.2 9.3 0.00032 32.9 3.7 91 102-204 197-292 (336)
191 2nyu_A Putative ribosomal RNA 55.6 16 0.00054 27.2 4.5 99 102-208 24-150 (196)
192 1qam_A ERMC' methyltransferase 55.0 9.3 0.00032 31.3 3.4 81 102-187 32-115 (244)
193 1nv8_A HEMK protein; class I a 54.8 27 0.00092 29.3 6.3 67 102-171 125-198 (284)
194 3a27_A TYW2, uncharacterized p 54.2 12 0.00042 30.9 4.0 97 102-206 121-222 (272)
195 3id6_C Fibrillarin-like rRNA/T 53.1 13 0.00046 31.2 4.1 70 102-174 78-154 (232)
196 1njg_A DNA polymerase III subu 52.7 26 0.0009 25.6 5.2 85 168-252 128-216 (250)
197 3c3p_A Methyltransferase; NP_9 51.3 26 0.0009 26.8 5.2 108 85-203 43-160 (210)
198 3c3y_A Pfomt, O-methyltransfer 50.4 12 0.0004 30.2 3.2 113 83-203 55-181 (237)
199 3dr5_A Putative O-methyltransf 50.4 18 0.0006 29.2 4.3 117 83-203 38-163 (221)
200 3fpf_A Mtnas, putative unchara 48.8 30 0.001 30.7 5.9 97 102-208 124-227 (298)
201 3rht_A (gatase1)-like protein; 47.2 23 0.00079 30.7 4.8 81 99-203 2-87 (259)
202 3b3j_A Histone-arginine methyl 46.9 21 0.00073 32.8 4.8 94 102-201 160-261 (480)
203 3duw_A OMT, O-methyltransferas 46.6 34 0.0012 26.3 5.2 116 81-203 41-167 (223)
204 2hnk_A SAM-dependent O-methylt 46.6 10 0.00035 30.0 2.3 94 102-203 62-181 (239)
205 3cbg_A O-methyltransferase; cy 46.0 29 0.00099 27.6 4.9 111 83-202 57-181 (232)
206 3r3h_A O-methyltransferase, SA 40.0 22 0.00077 28.8 3.4 121 81-207 43-176 (242)
207 1uf3_A Hypothetical protein TT 39.6 48 0.0016 24.9 5.0 6 198-203 35-40 (228)
208 2h1r_A Dimethyladenosine trans 38.3 24 0.00083 29.8 3.5 64 102-174 44-114 (299)
209 1af7_A Chemotaxis receptor met 37.5 22 0.00074 30.5 3.1 41 163-203 211-251 (274)
210 1sqg_A SUN protein, FMU protei 35.4 31 0.0011 30.6 3.8 70 102-171 248-321 (429)
211 3gjy_A Spermidine synthase; AP 34.9 29 0.00098 30.9 3.5 98 103-203 92-200 (317)
212 2xyq_A Putative 2'-O-methyl tr 33.5 43 0.0015 29.1 4.4 103 102-219 65-188 (290)
213 1yub_A Ermam, rRNA methyltrans 33.0 13 0.00044 29.9 0.9 68 102-174 31-101 (245)
214 1ixk_A Methyltransferase; open 32.6 62 0.0021 27.4 5.1 117 102-219 120-266 (315)
215 4fx0_A Probable transcriptiona 31.7 17 0.00059 27.4 1.4 66 85-154 10-86 (148)
216 2chg_A Replication factor C sm 30.7 88 0.003 22.7 5.0 84 168-251 104-191 (226)
217 1zq9_A Probable dimethyladenos 30.6 40 0.0014 28.2 3.6 65 102-171 30-99 (285)
218 3giw_A Protein of unknown func 30.2 51 0.0018 29.0 4.3 182 49-240 30-240 (277)
219 2kwt_A Protease NS2-3; NS2 dom 29.7 20 0.00069 23.8 1.2 11 227-237 7-17 (33)
220 2yxl_A PH0851 protein, 450AA l 29.3 68 0.0023 28.7 5.0 67 102-171 261-336 (450)
221 3lcv_B Sisomicin-gentamicin re 28.5 44 0.0015 30.3 3.6 139 89-239 115-264 (281)
222 2ozv_A Hypothetical protein AT 28.5 41 0.0014 27.4 3.2 72 101-172 37-122 (260)
223 2jwa_A Receptor tyrosine-prote 28.3 32 0.0011 23.7 2.1 16 29-44 7-22 (44)
224 3izc_W 60S ribosomal protein R 28.2 15 0.00053 29.9 0.6 23 175-197 76-99 (121)
225 3ftd_A Dimethyladenosine trans 27.7 92 0.0031 25.8 5.2 80 102-188 33-117 (249)
226 2pe4_A Hyaluronidase-1; hyalur 27.7 22 0.00075 34.0 1.6 50 149-203 250-304 (424)
227 1zco_A 2-dehydro-3-deoxyphosph 27.4 20 0.00067 31.0 1.1 96 68-193 156-258 (262)
228 2h00_A Methyltransferase 10 do 27.0 56 0.0019 25.7 3.6 71 102-172 67-147 (254)
229 2wk1_A NOVP; transferase, O-me 26.8 48 0.0017 28.9 3.5 137 85-225 89-269 (282)
230 1sw5_A Osmoprotection protein 26.2 1.2E+02 0.0041 24.8 5.6 61 88-160 151-212 (275)
231 3l5o_A Uncharacterized protein 24.8 25 0.00086 31.1 1.4 46 180-230 195-241 (270)
232 1jr3_A DNA polymerase III subu 24.3 58 0.002 26.7 3.4 84 168-251 121-208 (373)
233 3c0k_A UPF0064 protein YCCW; P 23.8 41 0.0014 29.3 2.5 107 101-208 221-344 (396)
234 1o6a_A Putative flagellar moto 23.2 12 0.0004 28.0 -1.0 28 183-210 48-75 (96)
235 2yv2_A Succinyl-COA synthetase 22.7 34 0.0012 29.6 1.7 26 177-202 78-103 (297)
236 3idw_A Actin cytoskeleton-regu 21.8 33 0.0011 25.8 1.3 23 230-252 5-29 (72)
237 2b78_A Hypothetical protein SM 21.5 38 0.0013 29.8 1.8 106 102-208 214-336 (385)
238 2h1q_A Hypothetical protein; Z 21.2 33 0.0011 30.2 1.4 28 181-208 196-224 (270)
239 3syl_A Protein CBBX; photosynt 20.9 93 0.0032 25.0 3.9 85 169-253 133-236 (309)
No 1
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=97.99 E-value=1e-05 Score=62.06 Aligned_cols=136 Identities=15% Similarity=0.097 Sum_probs=95.0
Q ss_pred ccceeeecCCchhHhHhhhccccccccccccccccchhHHHHHHHhhceeeeeeecCCCCCCCCCccEEEecccccccCh
Q 024173 101 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYLSP 180 (271)
Q Consensus 101 M~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvrKGiVRvADIkfpLPYR~kSFslVivSDaLDyLsp 180 (271)
-.+||.||-.+......|.+. ..+..|||+.+ +.-..++....+--+..+|+. .+|+...+|++|+..++|.|+++
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~--~~~~~a~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~~l~~~~~ 117 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL-GHQIEGLEPAT--RLVELARQTHPSVTFHHGTIT-DLSDSPKRWAGLLAWYSLIHMGP 117 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT-TCCEEEECCCH--HHHHHHHHHCTTSEEECCCGG-GGGGSCCCEEEEEEESSSTTCCT
T ss_pred CCeEEEecCCCCHHHHHHHhc-CCeEEEEeCCH--HHHHHHHHhCCCCeEEeCccc-ccccCCCCeEEEEehhhHhcCCH
Confidence 468999999999987777766 56889998753 222233332223345667764 46777899999999999999998
Q ss_pred hhhcccccchhhccc-CceEEEecCCCchhhhHHhhhhcCCccccccchhHHHHHHHhccccch
Q 024173 181 KYLNKTLPDLARVAS-DGVLIFAGYPGQQRAKVAELSKFGRPAKMRSSSWWIRYFVQTSLEENE 243 (271)
Q Consensus 181 ryLNkTLPeLaRvsa-dglViF~G~PgqqrakvaelskfgrpaK~rsssWW~r~F~qt~LeEnE 243 (271)
..+.+.|-++.|+-. +|.++++-..+.. ..++.....+....+...|.+.+.++|++.-+
T Consensus 118 ~~~~~~l~~~~~~L~pgG~l~i~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 178 (203)
T 3h2b_A 118 GELPDALVALRMAVEDGGGLLMSFFSGPS---LEPMYHPVATAYRWPLPELAQALETAGFQVTS 178 (203)
T ss_dssp TTHHHHHHHHHHTEEEEEEEEEEEECCSS---CEEECCSSSCEEECCHHHHHHHHHHTTEEEEE
T ss_pred HHHHHHHHHHHHHcCCCcEEEEEEccCCc---hhhhhchhhhhccCCHHHHHHHHHHCCCcEEE
Confidence 888899999999765 5666665533322 22233333344567788899999999987543
No 2
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=97.79 E-value=9.5e-05 Score=58.27 Aligned_cols=129 Identities=17% Similarity=0.133 Sum_probs=90.8
Q ss_pred cceeeecCCchhHhHhhhcccccccccccccc--ccchhHHHHH--HHhhceeeeeeecCCCCCCCCCccEEEecccccc
Q 024173 102 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKS--LVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDY 177 (271)
Q Consensus 102 ~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKs--LvrKGiVRvADIkfpLPYR~kSFslVivSDaLDy 177 (271)
.+||-||-.+......|.+ ...+..|||+.+ ++-+..+++. +..+=-+..+|+.-..| ..+|++|+.+.+|.|
T Consensus 68 ~~vLDiGcG~G~~~~~l~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--~~~fD~v~~~~~l~~ 144 (235)
T 3lcc_A 68 GRALVPGCGGGHDVVAMAS-PERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRP--TELFDLIFDYVFFCA 144 (235)
T ss_dssp EEEEEETCTTCHHHHHHCB-TTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCC--SSCEEEEEEESSTTT
T ss_pred CCEEEeCCCCCHHHHHHHh-CCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCC--CCCeeEEEEChhhhc
Confidence 4999999999988887765 566788887653 2333333322 11122356677765333 449999999999999
Q ss_pred cChhhhcccccchhh-cccCceEEEecCCCchhhhHHhhhhcCCccccccchhHHHHHHHhcccc
Q 024173 178 LSPKYLNKTLPDLAR-VASDGVLIFAGYPGQQRAKVAELSKFGRPAKMRSSSWWIRYFVQTSLEE 241 (271)
Q Consensus 178 LspryLNkTLPeLaR-vsadglViF~G~PgqqrakvaelskfgrpaK~rsssWW~r~F~qt~LeE 241 (271)
++|....+.|-++.| +..+|.+++..++.... .+.|.-..+...|.+.|.++|++.
T Consensus 145 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~--------~~~~~~~~~~~~~~~~l~~~Gf~~ 201 (235)
T 3lcc_A 145 IEPEMRPAWAKSMYELLKPDGELITLMYPITDH--------VGGPPYKVDVSTFEEVLVPIGFKA 201 (235)
T ss_dssp SCGGGHHHHHHHHHHHEEEEEEEEEEECCCSCC--------CSCSSCCCCHHHHHHHHGGGTEEE
T ss_pred CCHHHHHHHHHHHHHHCCCCcEEEEEEeccccc--------CCCCCccCCHHHHHHHHHHcCCeE
Confidence 999999999999999 56688888888765432 222333367788999999988764
No 3
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=97.72 E-value=4.1e-05 Score=59.21 Aligned_cols=131 Identities=15% Similarity=0.145 Sum_probs=93.6
Q ss_pred cceeeecCCchhHhHhhhccccccccccccccccchhHHHHHHHhhceeeeeeecCCCCCCCCCccEEEecccccccChh
Q 024173 102 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYLSPK 181 (271)
Q Consensus 102 ~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvrKGiVRvADIkfpLPYR~kSFslVivSDaLDyLspr 181 (271)
.+||.+|..+......|.+. ..+..|||+.+ +.-..++... .--+..+|+. .+| ...+|++||.+++|.|+.+.
T Consensus 45 ~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~--~~~~~a~~~~-~~~~~~~d~~-~~~-~~~~fD~v~~~~~l~~~~~~ 118 (211)
T 3e23_A 45 AKILELGCGAGYQAEAMLAA-GFDVDATDGSP--ELAAEASRRL-GRPVRTMLFH-QLD-AIDAYDAVWAHACLLHVPRD 118 (211)
T ss_dssp CEEEESSCTTSHHHHHHHHT-TCEEEEEESCH--HHHHHHHHHH-TSCCEECCGG-GCC-CCSCEEEEEECSCGGGSCHH
T ss_pred CcEEEECCCCCHHHHHHHHc-CCeEEEECCCH--HHHHHHHHhc-CCceEEeeec-cCC-CCCcEEEEEecCchhhcCHH
Confidence 58999999999988887766 56788887643 2222333332 2234566764 345 67899999999999999988
Q ss_pred hhcccccchhhccc-CceEEEecCCCchhhhHHhhhhcCCccccccchhHHHHHHHhc-cccc
Q 024173 182 YLNKTLPDLARVAS-DGVLIFAGYPGQQRAKVAELSKFGRPAKMRSSSWWIRYFVQTS-LEEN 242 (271)
Q Consensus 182 yLNkTLPeLaRvsa-dglViF~G~PgqqrakvaelskfgrpaK~rsssWW~r~F~qt~-LeEn 242 (271)
.+.+.|-++.|+-. +|.++++-.++.. .....+++.....+...|.+.|.++| ++.-
T Consensus 119 ~~~~~l~~~~~~LkpgG~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~ 177 (211)
T 3e23_A 119 ELADVLKLIWRALKPGGLFYASYKSGEG----EGRDKLARYYNYPSEEWLRARYAEAGTWASV 177 (211)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEEECCSS----CEECTTSCEECCCCHHHHHHHHHHHCCCSEE
T ss_pred HHHHHHHHHHHhcCCCcEEEEEEcCCCc----ccccccchhccCCCHHHHHHHHHhCCCcEEE
Confidence 88999999999755 5666666444432 12234566677788999999999999 7643
No 4
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=97.65 E-value=9.6e-05 Score=57.44 Aligned_cols=99 Identities=17% Similarity=0.180 Sum_probs=71.7
Q ss_pred ccceeeecCCchhHhHhhhcccc-ccccccccccccchhHHHHHHHh----------hceeeeeeecCCCCCCCCCccEE
Q 024173 101 MHKVLHVGPDTCSVVSTLLKEEE-TEAWGVEPYDIEDADARCKSLVH----------KGIVRVADIKFPLPYRAKSFPLV 169 (271)
Q Consensus 101 M~kVLHVGPdtC~VVs~LLkEe~-tEAWGVEPydied~d~~CKsLvr----------KGiVRvADIkfpLPYR~kSFslV 169 (271)
-.+||-||-.+......|.+... .+.+|||+.+ ++-..++...+ +=-+..+|+ ..+|....+|++|
T Consensus 30 ~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~--~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~V 106 (219)
T 3jwg_A 30 AKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSY--SVLERAKDRLKIDRLPEMQRKRISLFQSSL-VYRDKRFSGYDAA 106 (219)
T ss_dssp CCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCH--HHHHHHHHHHTGGGSCHHHHTTEEEEECCS-SSCCGGGTTCSEE
T ss_pred CCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCH--HHHHHHHHHHHhhccccccCcceEEEeCcc-cccccccCCCCEE
Confidence 35899999999999888887654 6889998753 22333333222 223456677 4467777899999
Q ss_pred EecccccccChhhhcccccchhhcccC-ceEEEe
Q 024173 170 IVSDALDYLSPKYLNKTLPDLARVASD-GVLIFA 202 (271)
Q Consensus 170 ivSDaLDyLspryLNkTLPeLaRvsad-glViF~ 202 (271)
+.+++|.|+++..+.+.|-++.|+-.. |++|++
T Consensus 107 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 140 (219)
T 3jwg_A 107 TVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVST 140 (219)
T ss_dssp EEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEE
T ss_pred EEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEc
Confidence 999999999988888889999888765 444444
No 5
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=97.65 E-value=4.1e-05 Score=60.29 Aligned_cols=134 Identities=16% Similarity=0.137 Sum_probs=85.4
Q ss_pred ccceeeecCCchhHhHhhhccccccccccccccccchhHHHHHHH----hhceeeeeeecCCCCCCCCCccEEEeccccc
Q 024173 101 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLV----HKGIVRVADIKFPLPYRAKSFPLVIVSDALD 176 (271)
Q Consensus 101 M~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLv----rKGiVRvADIkfpLPYR~kSFslVivSDaLD 176 (271)
-.+||.+|..|-.....|.+. ..+..|||+.+ +.-..++... ..--+..+|+ ..+|+...+|++|+.++++.
T Consensus 40 ~~~vLDiG~G~G~~~~~l~~~-~~~v~~vD~s~--~~~~~a~~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~ 115 (263)
T 2yqz_A 40 EPVFLELGVGTGRIALPLIAR-GYRYIALDADA--AMLEVFRQKIAGVDRKVQVVQADA-RAIPLPDESVHGVIVVHLWH 115 (263)
T ss_dssp CCEEEEETCTTSTTHHHHHTT-TCEEEEEESCH--HHHHHHHHHTTTSCTTEEEEESCT-TSCCSCTTCEEEEEEESCGG
T ss_pred CCEEEEeCCcCCHHHHHHHHC-CCEEEEEECCH--HHHHHHHHHhhccCCceEEEEccc-ccCCCCCCCeeEEEECCchh
Confidence 458999999998887777765 56888888753 1222222222 1223556777 46788888999999999999
Q ss_pred ccChhhhcccccchhhcc-cCceEEEecCCCc---h----hhhHHh-hhhcCCc----cccccchhHHHHHHHhcccc
Q 024173 177 YLSPKYLNKTLPDLARVA-SDGVLIFAGYPGQ---Q----RAKVAE-LSKFGRP----AKMRSSSWWIRYFVQTSLEE 241 (271)
Q Consensus 177 yLspryLNkTLPeLaRvs-adglViF~G~Pgq---q----rakvae-lskfgrp----aK~rsssWW~r~F~qt~LeE 241 (271)
++.. ..+.|.++.|+- .+|.++++ ++.. . .....+ +.++|.| ....+...|.+.+.+.|++.
T Consensus 116 ~~~~--~~~~l~~~~~~L~pgG~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~ 190 (263)
T 2yqz_A 116 LVPD--WPKVLAEAIRVLKPGGALLEG-WDQAEASPEWTLQERWRAFAAEEGFPVERGLHAKRLKEVEEALRRLGLKP 190 (263)
T ss_dssp GCTT--HHHHHHHHHHHEEEEEEEEEE-EEEECCCHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHTTCCC
T ss_pred hcCC--HHHHHHHHHHHCCCCcEEEEE-ecCCCccHHHHHHHHHHHHHHHhCCCcccccccCCHHHHHHHHHHcCCCc
Confidence 9962 456778888874 46777776 4433 1 112222 2345544 22344555667777777763
No 6
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=97.62 E-value=2.5e-05 Score=59.68 Aligned_cols=155 Identities=16% Similarity=0.220 Sum_probs=96.1
Q ss_pred HHhHhHHHHHHhcccccceeeecCCchhHhHhhhcccccccccccccc--ccchhHHHHHHHhhceeeeeeecCCCCCCC
Q 024173 86 IQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRA 163 (271)
Q Consensus 86 V~~AiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvrKGiVRvADIkfpLPYR~ 163 (271)
+.+.+-.+...- .-.+||.+|..+......++.+...+..|||+.+ ++-+..+++..-.+--+..+|+. .+|+..
T Consensus 11 ~~~~~~~~~~~~--~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~-~~~~~~ 87 (209)
T 2p8j_A 11 LYRFLKYCNESN--LDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSRENNFKLNISKGDIR-KLPFKD 87 (209)
T ss_dssp HHHHHHHHHHSS--SCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTT-SCCSCT
T ss_pred HHHHHHHHhccC--CCCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEECchh-hCCCCC
Confidence 445555554332 2258999999988876666667777888988753 22233333322112235567774 467778
Q ss_pred CCccEEEecccccccChhhhcccccchhhccc-CceEEEecC-CCchhhhHH-hhh-------hcCCcc--ccccchhHH
Q 024173 164 KSFPLVIVSDALDYLSPKYLNKTLPDLARVAS-DGVLIFAGY-PGQQRAKVA-ELS-------KFGRPA--KMRSSSWWI 231 (271)
Q Consensus 164 kSFslVivSDaLDyLspryLNkTLPeLaRvsa-dglViF~G~-Pgqqrakva-els-------kfgrpa--K~rsssWW~ 231 (271)
.+|++|+.++.+.|+++....+.|.++.|+-. +|.++++-+ +.+.+.... .+. .-+.|. ..-+...|.
T Consensus 88 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 167 (209)
T 2p8j_A 88 ESMSFVYSYGTIFHMRKNDVKEAIDEIKRVLKPGGLACINFLTTKDERYNKGEKIGEGEFLQLERGEKVIHSYVSLEEAD 167 (209)
T ss_dssp TCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEETTSTTTTCSEEEETTEEEECC-CCCEEEEEECHHHHH
T ss_pred CceeEEEEcChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEecccchhccchhhhccccceeccCCCceeEEecCHHHHH
Confidence 89999999999999998889999999998754 567776652 222221100 000 112222 344566678
Q ss_pred HHHHHhccccch
Q 024173 232 RYFVQTSLEENE 243 (271)
Q Consensus 232 r~F~qt~LeEnE 243 (271)
++|.+.++.+.|
T Consensus 168 ~~~~~~g~~~~~ 179 (209)
T 2p8j_A 168 KYFKDMKVLFKE 179 (209)
T ss_dssp HTTTTSEEEEEE
T ss_pred HHHhhcCceeee
Confidence 888888776544
No 7
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=97.61 E-value=6e-05 Score=59.26 Aligned_cols=139 Identities=15% Similarity=0.217 Sum_probs=91.3
Q ss_pred cccceeeecCCchhHhHhhhcccccccccccccc--ccchhHHHHHHHhhceeeeeeecCCCCCCCCCccEEEecccccc
Q 024173 100 SMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDY 177 (271)
Q Consensus 100 sM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvrKGiVRvADIkfpLPYR~kSFslVivSDaLDy 177 (271)
.-.+||.||-.+..+...|++....+..|||+.+ ++-+..+++.. ..--+..+|+. .+|+...+|++|+.++.|.|
T Consensus 93 ~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~d~~-~~~~~~~~fD~v~~~~~l~~ 170 (254)
T 1xtp_A 93 GTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGM-PVGKFILASME-TATLPPNTYDLIVIQWTAIY 170 (254)
T ss_dssp CCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTS-SEEEEEESCGG-GCCCCSSCEEEEEEESCGGG
T ss_pred CCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccC-CceEEEEccHH-HCCCCCCCeEEEEEcchhhh
Confidence 4568999999999988888877656677887642 22233333222 12234456664 36777889999999999999
Q ss_pred cChhhhcccccchhhccc-CceEEEecCCCchhhhHHhhhhcCCccccccchhHHHHHHHhccccch
Q 024173 178 LSPKYLNKTLPDLARVAS-DGVLIFAGYPGQQRAKVAELSKFGRPAKMRSSSWWIRYFVQTSLEENE 243 (271)
Q Consensus 178 LspryLNkTLPeLaRvsa-dglViF~G~PgqqrakvaelskfgrpaK~rsssWW~r~F~qt~LeEnE 243 (271)
+++..+.+.|-++.|+-. +|.++++-........ ........-.++..-|.+.|.++|++.-+
T Consensus 171 ~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~aGf~~~~ 234 (254)
T 1xtp_A 171 LTDADFVKFFKHCQQALTPNGYIFFKENCSTGDRF---LVDKEDSSLTRSDIHYKRLFNESGVRVVK 234 (254)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CCE---EEETTTTEEEBCHHHHHHHHHHHTCCEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCeEEEEEecCCCcccc---eecccCCcccCCHHHHHHHHHHCCCEEEE
Confidence 998888899999988755 6777776531111000 00111122356778889999999887543
No 8
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=97.61 E-value=0.00019 Score=55.92 Aligned_cols=100 Identities=14% Similarity=0.110 Sum_probs=71.7
Q ss_pred cceeeecCCchhHhHhhhcccc-ccccccccccccchhHHHHHHHh----------hceeeeeeecCCCCCCCCCccEEE
Q 024173 102 HKVLHVGPDTCSVVSTLLKEEE-TEAWGVEPYDIEDADARCKSLVH----------KGIVRVADIKFPLPYRAKSFPLVI 170 (271)
Q Consensus 102 ~kVLHVGPdtC~VVs~LLkEe~-tEAWGVEPydied~d~~CKsLvr----------KGiVRvADIkfpLPYR~kSFslVi 170 (271)
.+||-||..+......|.+... .+..|||+.+ ++-..++...+ +--+..+|+. -+|....+|++|+
T Consensus 31 ~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~--~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~-~~~~~~~~fD~v~ 107 (217)
T 3jwh_A 31 RRVIDLGCGQGNLLKILLKDSFFEQITGVDVSY--RSLEIAQERLDRLRLPRNQWERLQLIQGALT-YQDKRFHGYDAAT 107 (217)
T ss_dssp CEEEEETCTTCHHHHHHHHCTTCSEEEEEESCH--HHHHHHHHHHTTCCCCHHHHTTEEEEECCTT-SCCGGGCSCSEEE
T ss_pred CEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCH--HHHHHHHHHHHHhcCCcccCcceEEEeCCcc-cccccCCCcCEEe
Confidence 5899999999999888887643 6888988753 22333333322 2234556763 3455668999999
Q ss_pred ecccccccChhhhcccccchhhccc-CceEEEecC
Q 024173 171 VSDALDYLSPKYLNKTLPDLARVAS-DGVLIFAGY 204 (271)
Q Consensus 171 vSDaLDyLspryLNkTLPeLaRvsa-dglViF~G~ 204 (271)
.+++|.|+++..+.+.|-++.|+-. +|++|++-+
T Consensus 108 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 142 (217)
T 3jwh_A 108 VIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPN 142 (217)
T ss_dssp EESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred eHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccC
Confidence 9999999998888899999998755 565555543
No 9
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=97.60 E-value=0.00023 Score=52.80 Aligned_cols=122 Identities=16% Similarity=0.153 Sum_probs=82.4
Q ss_pred cccceeeecCCchhHhHhhhccccccccccccccccchhHHHHHHHhhceeeeeeecCCCCCCCCCccEEEec-cccccc
Q 024173 100 SMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVS-DALDYL 178 (271)
Q Consensus 100 sM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvrKGiVRvADIkfpLPYR~kSFslVivS-DaLDyL 178 (271)
.-.+||.+|..+......|.+. ..+..|||+.+ ++-..++....+--+..+|+.- +|+...+|++||.+ +.+.|+
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~-~~~v~~~D~~~--~~~~~a~~~~~~~~~~~~d~~~-~~~~~~~~D~i~~~~~~~~~~ 121 (195)
T 3cgg_A 46 RGAKILDAGCGQGRIGGYLSKQ-GHDVLGTDLDP--ILIDYAKQDFPEARWVVGDLSV-DQISETDFDLIVSAGNVMGFL 121 (195)
T ss_dssp TTCEEEEETCTTTHHHHHHHHT-TCEEEEEESCH--HHHHHHHHHCTTSEEEECCTTT-SCCCCCCEEEEEECCCCGGGS
T ss_pred CCCeEEEECCCCCHHHHHHHHC-CCcEEEEcCCH--HHHHHHHHhCCCCcEEEccccc-CCCCCCceeEEEECCcHHhhc
Confidence 4458999999999888877766 56778887642 1222233322233445667643 45667899999998 899999
Q ss_pred Chhhhcccccchhhccc-CceEEEecCCCchhhhHHhhhhcCCccccccchhHHHHHHHhcccc
Q 024173 179 SPKYLNKTLPDLARVAS-DGVLIFAGYPGQQRAKVAELSKFGRPAKMRSSSWWIRYFVQTSLEE 241 (271)
Q Consensus 179 spryLNkTLPeLaRvsa-dglViF~G~PgqqrakvaelskfgrpaK~rsssWW~r~F~qt~LeE 241 (271)
++..+.+.|.++.|+-. +|.++++-.+.+. .+..-|.+.+.++|++.
T Consensus 122 ~~~~~~~~l~~~~~~l~~~G~l~~~~~~~~~----------------~~~~~~~~~l~~~Gf~~ 169 (195)
T 3cgg_A 122 AEDGREPALANIHRALGADGRAVIGFGAGRG----------------WVFGDFLEVAERVGLEL 169 (195)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEEEEETTSS----------------CCHHHHHHHHHHHTEEE
T ss_pred ChHHHHHHHHHHHHHhCCCCEEEEEeCCCCC----------------cCHHHHHHHHHHcCCEE
Confidence 98888899999988754 5666665433221 34455677777777654
No 10
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=97.57 E-value=5.9e-05 Score=59.85 Aligned_cols=138 Identities=12% Similarity=0.054 Sum_probs=90.5
Q ss_pred ccceeeecCCchhHhHhhhcccccccccccccc--ccchhHHHHHH-HhhceeeeeeecCCCCCCCCCccEEEecccccc
Q 024173 101 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSL-VHKGIVRVADIKFPLPYRAKSFPLVIVSDALDY 177 (271)
Q Consensus 101 M~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsL-vrKGiVRvADIkfpLPYR~kSFslVivSDaLDy 177 (271)
-.+||-||-.+......|++....+..|||+.+ ++-+..+++.. ..+--+..+|+. .+|....+|++||..++|.|
T Consensus 80 ~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~~l~~ 158 (241)
T 2ex4_A 80 TSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQ-DFTPEPDSYDVIWIQWVIGH 158 (241)
T ss_dssp CSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGG-GCCCCSSCEEEEEEESCGGG
T ss_pred CCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChh-hcCCCCCCEEEEEEcchhhh
Confidence 358999999999998888887766888988643 33333333332 112235566753 45666779999999999999
Q ss_pred cChhhhcccccchhhccc-CceEEEecCCCchhhhHHhhhhcCCccccccchhHHHHHHHhccccch
Q 024173 178 LSPKYLNKTLPDLARVAS-DGVLIFAGYPGQQRAKVAELSKFGRPAKMRSSSWWIRYFVQTSLEENE 243 (271)
Q Consensus 178 LspryLNkTLPeLaRvsa-dglViF~G~PgqqrakvaelskfgrpaK~rsssWW~r~F~qt~LeEnE 243 (271)
+.+..+.+.|-++.|+-. +|.++++..-... ..+-.-....-.++..-|.+.|.++|++.-+
T Consensus 159 ~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~ 221 (241)
T 2ex4_A 159 LTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQE----GVILDDVDSSVCRDLDVVRRIICSAGLSLLA 221 (241)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEEEEEEBSS----SEEEETTTTEEEEBHHHHHHHHHHTTCCEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCeEEEEEEccCCC----cceecccCCcccCCHHHHHHHHHHcCCeEEE
Confidence 998777888888888654 6777775421111 0000001122345677788888888886543
No 11
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=97.53 E-value=0.00023 Score=56.43 Aligned_cols=133 Identities=16% Similarity=0.097 Sum_probs=85.2
Q ss_pred cceeeecCCchhHhHhhhccccccccccccccccchhHHHHHHHhhceeeeeeecCCC-CCCCCCccEEEecccccccCh
Q 024173 102 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPL-PYRAKSFPLVIVSDALDYLSP 180 (271)
Q Consensus 102 ~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvrKGiVRvADIkfpL-PYR~kSFslVivSDaLDyLsp 180 (271)
.+||.||-.+......|.+. ..+..||++.+ +.-..|+.. --+..+|+.-.+ |+...+|++|+.+++|.++.+
T Consensus 43 ~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~--~~~~~a~~~---~~~~~~d~~~~~~~~~~~~fD~i~~~~~l~~~~~ 116 (240)
T 3dli_A 43 RRVLDIGCGRGEFLELCKEE-GIESIGVDINE--DMIKFCEGK---FNVVKSDAIEYLKSLPDKYLDGVMISHFVEHLDP 116 (240)
T ss_dssp SCEEEETCTTTHHHHHHHHH-TCCEEEECSCH--HHHHHHHTT---SEEECSCHHHHHHTSCTTCBSEEEEESCGGGSCG
T ss_pred CeEEEEeCCCCHHHHHHHhC-CCcEEEEECCH--HHHHHHHhh---cceeeccHHHHhhhcCCCCeeEEEECCchhhCCc
Confidence 58999999999887666654 66788887743 122222222 122334543322 677899999999999999999
Q ss_pred hhhcccccchhhccc-CceEEEec-CCCchhhhHHhhhhcCCccccccchhHHHHHHHhcccc
Q 024173 181 KYLNKTLPDLARVAS-DGVLIFAG-YPGQQRAKVAELSKFGRPAKMRSSSWWIRYFVQTSLEE 241 (271)
Q Consensus 181 ryLNkTLPeLaRvsa-dglViF~G-~PgqqrakvaelskfgrpaK~rsssWW~r~F~qt~LeE 241 (271)
..+.+.|-++.|+-. +|.++++- .|... ....+.--+..-....+..-|.+.+.++|++.
T Consensus 117 ~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~ 178 (240)
T 3dli_A 117 ERLFELLSLCYSKMKYSSYIVIESPNPTSL-YSLINFYIDPTHKKPVHPETLKFILEYLGFRD 178 (240)
T ss_dssp GGHHHHHHHHHHHBCTTCCEEEEEECTTSH-HHHHHHTTSTTCCSCCCHHHHHHHHHHHTCEE
T ss_pred HHHHHHHHHHHHHcCCCcEEEEEeCCcchh-HHHHHHhcCccccccCCHHHHHHHHHHCCCeE
Confidence 899999999998765 55666654 33322 22222111112234445677888888888763
No 12
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=97.41 E-value=0.00031 Score=53.56 Aligned_cols=134 Identities=19% Similarity=0.331 Sum_probs=86.0
Q ss_pred cccceeeecCCchhHhHhhhccccccccccccccccchhHHHHHHHhhceeeeeeec-CCCCCCCCCccEEEeccccccc
Q 024173 100 SMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIK-FPLPYRAKSFPLVIVSDALDYL 178 (271)
Q Consensus 100 sM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvrKGiVRvADIk-fpLPYR~kSFslVivSDaLDyL 178 (271)
.-.+||.+|..+-.....|.+. ..+..|||+.+ +.-..++... .-+..+|+. +.+|+...+|++|+.++.+.++
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~-~~~~~~~D~~~--~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~fD~v~~~~~l~~~ 106 (230)
T 3cc8_A 32 EWKEVLDIGCSSGALGAAIKEN-GTRVSGIEAFP--EAAEQAKEKL--DHVVLGDIETMDMPYEEEQFDCVIFGDVLEHL 106 (230)
T ss_dssp TCSEEEEETCTTSHHHHHHHTT-TCEEEEEESSH--HHHHHHHTTS--SEEEESCTTTCCCCSCTTCEEEEEEESCGGGS
T ss_pred CCCcEEEeCCCCCHHHHHHHhc-CCeEEEEeCCH--HHHHHHHHhC--CcEEEcchhhcCCCCCCCccCEEEECChhhhc
Confidence 4468999999999988888877 57888887643 1111222111 135567774 4578888999999999999999
Q ss_pred Chhhhcccccchhhcc-cCceEEEecCCCch-hhhHHhhh--hcC---------CccccccchhHHHHHHHhcccc
Q 024173 179 SPKYLNKTLPDLARVA-SDGVLIFAGYPGQQ-RAKVAELS--KFG---------RPAKMRSSSWWIRYFVQTSLEE 241 (271)
Q Consensus 179 spryLNkTLPeLaRvs-adglViF~G~Pgqq-rakvaels--kfg---------rpaK~rsssWW~r~F~qt~LeE 241 (271)
... .+.|-++.|+- .+|.++++- |... -....++. .+. ......+...|.+.+.++|++.
T Consensus 107 ~~~--~~~l~~~~~~L~~gG~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~ 179 (230)
T 3cc8_A 107 FDP--WAVIEKVKPYIKQNGVILASI-PNVSHISVLAPLLAGNWTYTEYGLLDKTHIRFFTFNEMLRMFLKAGYSI 179 (230)
T ss_dssp SCH--HHHHHHTGGGEEEEEEEEEEE-ECTTSHHHHHHHHTTCCCCBSSSTTBTTCCCCCCHHHHHHHHHHTTEEE
T ss_pred CCH--HHHHHHHHHHcCCCCEEEEEe-CCcchHHHHHHHhcCCceeccCCCCCcceEEEecHHHHHHHHHHcCCeE
Confidence 643 46777787764 467777654 2211 11111111 010 1124457788999999999863
No 13
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=97.39 E-value=0.00049 Score=53.12 Aligned_cols=137 Identities=16% Similarity=0.233 Sum_probs=86.6
Q ss_pred cccceeeecCCchhHhHhhhccccccccccccccccchhHHHHHHHh-hceeeeeeecCCCCCCCCCccEEEeccccccc
Q 024173 100 SMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVH-KGIVRVADIKFPLPYRAKSFPLVIVSDALDYL 178 (271)
Q Consensus 100 sM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvr-KGiVRvADIkfpLPYR~kSFslVivSDaLDyL 178 (271)
.-.+||.+|..+......|.+. ..+..|||+.+ +.-..++.... +--+..+|+. .+|.. .+|++|+..++|.++
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~--~~~~~a~~~~~~~~~~~~~d~~-~~~~~-~~fD~v~~~~~l~~~ 119 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLLLA-GRTVYGIEPSR--EMRMIAKEKLPKEFSITEGDFL-SFEVP-TSIDTIVSTYAFHHL 119 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHHHT-TCEEEEECSCH--HHHHHHHHHSCTTCCEESCCSS-SCCCC-SCCSEEEEESCGGGS
T ss_pred CCCeEEEeCCCCCHHHHHHHhC-CCeEEEEeCCH--HHHHHHHHhCCCceEEEeCChh-hcCCC-CCeEEEEECcchhcC
Confidence 4468999999999888877765 67888888753 12222333222 2335566764 24554 999999999999999
Q ss_pred Chhhhcccccchhhcc-cCceEEEec--CCC--chhhhHHhhhhcC--------CccccccchhHHHHHHHhcccc
Q 024173 179 SPKYLNKTLPDLARVA-SDGVLIFAG--YPG--QQRAKVAELSKFG--------RPAKMRSSSWWIRYFVQTSLEE 241 (271)
Q Consensus 179 spryLNkTLPeLaRvs-adglViF~G--~Pg--qqrakvaelskfg--------rpaK~rsssWW~r~F~qt~LeE 241 (271)
.....-+.|-++.|+- .+|.++++- .+. ..+.....+.+-| .+....+...|.+.+.++|++-
T Consensus 120 ~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v 195 (220)
T 3hnr_A 120 TDDEKNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFENNGFHV 195 (220)
T ss_dssp CHHHHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHHHTTEEE
T ss_pred ChHHHHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHHHCCCEE
Confidence 8876555788888875 467777764 222 1111222222222 1112346678888888888853
No 14
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=97.38 E-value=0.00043 Score=54.69 Aligned_cols=133 Identities=11% Similarity=0.148 Sum_probs=86.1
Q ss_pred cceeeecCCchhHhHhhhcccccccccccccc--ccchhHHHHHHHhh--ceeeeeeecCCCCCCCCCccEEEecccccc
Q 024173 102 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHK--GIVRVADIKFPLPYRAKSFPLVIVSDALDY 177 (271)
Q Consensus 102 ~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvrK--GiVRvADIkfpLPYR~kSFslVivSDaLDy 177 (271)
.+||-||..+......|.+....+..|||+.+ ++-+..+++..--. =-+..+|+ ..+|+...+|++|+...++.+
T Consensus 48 ~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~ 126 (257)
T 3f4k_A 48 AKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSM-DNLPFQNEELDLIWSEGAIYN 126 (257)
T ss_dssp CEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT-TSCSSCTTCEEEEEEESCSCC
T ss_pred CeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECCh-hhCCCCCCCEEEEEecChHhh
Confidence 48999999999988888877666889998754 33344444332111 23567888 678888899999999999999
Q ss_pred cChhhhcccccchhhc-ccCceEEEec---CCCchhhhHHhh-hhcCCccccccchhHHHHHHHhccc
Q 024173 178 LSPKYLNKTLPDLARV-ASDGVLIFAG---YPGQQRAKVAEL-SKFGRPAKMRSSSWWIRYFVQTSLE 240 (271)
Q Consensus 178 LspryLNkTLPeLaRv-sadglViF~G---~Pgqqrakvael-skfgrpaK~rsssWW~r~F~qt~Le 240 (271)
+.+ .+.|-++.|+ ..+|.++++. .+........+. .... ..+.+..-|.+.+.++|++
T Consensus 127 ~~~---~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~aGf~ 189 (257)
T 3f4k_A 127 IGF---ERGMNEWSKYLKKGGFIAVSEASWFTSERPAEIEDFWMDAY--PEISVIPTCIDKMERAGYT 189 (257)
T ss_dssp CCH---HHHHHHHHTTEEEEEEEEEEEEEESSSCCCHHHHHHHHHHC--TTCCBHHHHHHHHHHTTEE
T ss_pred cCH---HHHHHHHHHHcCCCcEEEEEEeeccCCCChHHHHHHHHHhC--CCCCCHHHHHHHHHHCCCe
Confidence 954 5677888885 4567777764 111111111111 1100 1256677777888877764
No 15
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=97.37 E-value=0.0015 Score=52.08 Aligned_cols=148 Identities=21% Similarity=0.287 Sum_probs=91.4
Q ss_pred HhHHHHHHhcccccceeeecCCchhHhHhhhcccccccccccccc--ccchhHHHHHHH-hhceeeeeeecCCCCCCCCC
Q 024173 89 AIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV-HKGIVRVADIKFPLPYRAKS 165 (271)
Q Consensus 89 AiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLv-rKGiVRvADIkfpLPYR~kS 165 (271)
..|+++..--..-.+||.||..+......|.+.. .+..|||+.+ ++.+..+++..- ..=-+..+|+. .+|+...+
T Consensus 10 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~-~~~~~~~~ 87 (239)
T 1xxl_A 10 LGLMIKTAECRAEHRVLDIGAGAGHTALAFSPYV-QECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAE-SLPFPDDS 87 (239)
T ss_dssp HHHHHHHHTCCTTCEEEEESCTTSHHHHHHGGGS-SEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTT-BCCSCTTC
T ss_pred cchHHHHhCcCCCCEEEEEccCcCHHHHHHHHhC-CEEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccc-cCCCCCCc
Confidence 3455555555566789999999988776666554 5888888653 222333322110 11124567774 57888899
Q ss_pred ccEEEecccccccChhhhcccccchhhcc-cCceEEEec--CCCch--hhhHHhhhhc--CCccccccchhHHHHHHHhc
Q 024173 166 FPLVIVSDALDYLSPKYLNKTLPDLARVA-SDGVLIFAG--YPGQQ--RAKVAELSKF--GRPAKMRSSSWWIRYFVQTS 238 (271)
Q Consensus 166 FslVivSDaLDyLspryLNkTLPeLaRvs-adglViF~G--~Pgqq--rakvaelskf--grpaK~rsssWW~r~F~qt~ 238 (271)
|++|+.++++.++.. ..+.|.++.|+- .+|.++++. .|+.. +.-...+... +......+...|.+.+.++|
T Consensus 88 fD~v~~~~~l~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aG 165 (239)
T 1xxl_A 88 FDIITCRYAAHHFSD--VRKAVREVARVLKQDGRFLLVDHYAPEDPVLDEFVNHLNRLRDPSHVRESSLSEWQAMFSANQ 165 (239)
T ss_dssp EEEEEEESCGGGCSC--HHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHHHCTTCCCCCBHHHHHHHHHHTT
T ss_pred EEEEEECCchhhccC--HHHHHHHHHHHcCCCcEEEEEEcCCCCChhHHHHHHHHHHhccccccCCCCHHHHHHHHHHCC
Confidence 999999999999853 467788888875 567777764 23321 1111111111 22234556777888888888
Q ss_pred cc
Q 024173 239 LE 240 (271)
Q Consensus 239 Le 240 (271)
++
T Consensus 166 f~ 167 (239)
T 1xxl_A 166 LA 167 (239)
T ss_dssp EE
T ss_pred Cc
Confidence 76
No 16
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=97.37 E-value=0.00059 Score=51.68 Aligned_cols=111 Identities=12% Similarity=0.172 Sum_probs=75.4
Q ss_pred hHHHHHHhcccccceeeecCCchhHhHhhhcccccccccccccc--ccchhHHHHHHHhh--ceeeeeeecCCCCCCCCC
Q 024173 90 IPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHK--GIVRVADIKFPLPYRAKS 165 (271)
Q Consensus 90 iP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvrK--GiVRvADIkfpLPYR~kS 165 (271)
+..+.+.++..-.+||.+|..+......|.+....+..|||+.+ ++.+..+++..--. =-+..+|+. .+|+...+
T Consensus 33 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~ 111 (219)
T 3dlc_A 33 AENIINRFGITAGTCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVH-NIPIEDNY 111 (219)
T ss_dssp HHHHHHHHCCCEEEEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTT-BCSSCTTC
T ss_pred HHHHHHhcCCCCCEEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHH-HCCCCccc
Confidence 34444555544449999999999988888877667888887643 22333333322111 124567764 46777899
Q ss_pred ccEEEecccccccChhhhcccccchhhc-ccCceEEEec
Q 024173 166 FPLVIVSDALDYLSPKYLNKTLPDLARV-ASDGVLIFAG 203 (271)
Q Consensus 166 FslVivSDaLDyLspryLNkTLPeLaRv-sadglViF~G 203 (271)
|++|+..+.+.|+ ....+.|.++.|+ ..+|.++++.
T Consensus 112 ~D~v~~~~~l~~~--~~~~~~l~~~~~~L~pgG~l~~~~ 148 (219)
T 3dlc_A 112 ADLIVSRGSVFFW--EDVATAFREIYRILKSGGKTYIGG 148 (219)
T ss_dssp EEEEEEESCGGGC--SCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccEEEECchHhhc--cCHHHHHHHHHHhCCCCCEEEEEe
Confidence 9999999999998 3456788888886 4577877765
No 17
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=97.33 E-value=0.00012 Score=58.02 Aligned_cols=108 Identities=18% Similarity=0.184 Sum_probs=74.6
Q ss_pred hHHHHHHhcc-cccceeeecCCchhHhHhhhccccccccccccccccchhHHHHHHHh--hceeeeeeecCCCCCCCCCc
Q 024173 90 IPILKKAYGD-SMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVH--KGIVRVADIKFPLPYRAKSF 166 (271)
Q Consensus 90 iP~LkkaYGd-sM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvr--KGiVRvADIkfpLPYR~kSF 166 (271)
.+.|.+..++ .-.+||-+|..+..+...|++....+..|||+.+ +.-..++.... +--+..+|+. .+|+...+|
T Consensus 33 ~~~l~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~--~~~~~a~~~~~~~~~~~~~~d~~-~~~~~~~~f 109 (253)
T 3g5l_A 33 WHELKKMLPDFNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSE--RMLTEAKRKTTSPVVCYEQKAIE-DIAIEPDAY 109 (253)
T ss_dssp HHHHHTTCCCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCH--HHHHHHHHHCCCTTEEEEECCGG-GCCCCTTCE
T ss_pred HHHHHHhhhccCCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCH--HHHHHHHHhhccCCeEEEEcchh-hCCCCCCCe
Confidence 3444444443 3468999999999888888877655888888653 22222333322 2235667774 577778999
Q ss_pred cEEEecccccccChhhhcccccchhhc-ccCceEEEe
Q 024173 167 PLVIVSDALDYLSPKYLNKTLPDLARV-ASDGVLIFA 202 (271)
Q Consensus 167 slVivSDaLDyLspryLNkTLPeLaRv-sadglViF~ 202 (271)
++|+.+++|.|+ ..+.+.|-++.|+ ..+|.++++
T Consensus 110 D~v~~~~~l~~~--~~~~~~l~~~~~~LkpgG~l~~~ 144 (253)
T 3g5l_A 110 NVVLSSLALHYI--ASFDDICKKVYINLKSSGSFIFS 144 (253)
T ss_dssp EEEEEESCGGGC--SCHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEEchhhhhh--hhHHHHHHHHHHHcCCCcEEEEE
Confidence 999999999999 3467788888885 457777775
No 18
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=97.31 E-value=0.0001 Score=57.97 Aligned_cols=136 Identities=15% Similarity=0.171 Sum_probs=90.9
Q ss_pred ccceeeecCCchhHhHhhhccccccccccccccccchhHHHHHHHh---hceeeeeeecCCCCCCCCCccEEEecccccc
Q 024173 101 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVH---KGIVRVADIKFPLPYRAKSFPLVIVSDALDY 177 (271)
Q Consensus 101 M~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvr---KGiVRvADIkfpLPYR~kSFslVivSDaLDy 177 (271)
-.+||.||..+......|.+.-..+..|||+.+ +.-..++.... +=-+..+|+.- +|+...+|++|+..+++.|
T Consensus 56 ~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~--~~~~~a~~~~~~~~~~~~~~~d~~~-~~~~~~~fD~v~~~~~l~~ 132 (266)
T 3ujc_A 56 NSKVLDIGSGLGGGCMYINEKYGAHTHGIDICS--NIVNMANERVSGNNKIIFEANDILT-KEFPENNFDLIYSRDAILA 132 (266)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHCCEEEEEESCH--HHHHHHHHTCCSCTTEEEEECCTTT-CCCCTTCEEEEEEESCGGG
T ss_pred CCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCH--HHHHHHHHHhhcCCCeEEEECcccc-CCCCCCcEEEEeHHHHHHh
Confidence 358999999998888888776567888887654 12222333222 12345667643 4777899999999999999
Q ss_pred cChhhhcccccchhhccc-CceEEEecCCCch----hhh-HHhhhhcCCccccccchhHHHHHHHhcccc
Q 024173 178 LSPKYLNKTLPDLARVAS-DGVLIFAGYPGQQ----RAK-VAELSKFGRPAKMRSSSWWIRYFVQTSLEE 241 (271)
Q Consensus 178 LspryLNkTLPeLaRvsa-dglViF~G~Pgqq----rak-vaelskfgrpaK~rsssWW~r~F~qt~LeE 241 (271)
+++....+.|.++.|+-. +|.++++...... ... ...+...| ..+.+...|.+.+.++|++.
T Consensus 133 ~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~Gf~~ 200 (266)
T 3ujc_A 133 LSLENKNKLFQKCYKWLKPTGTLLITDYCATEKENWDDEFKEYVKQRK--YTLITVEEYADILTACNFKN 200 (266)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEEEEEEESCGGGCCHHHHHHHHHHT--CCCCCHHHHHHHHHHTTCEE
T ss_pred cChHHHHHHHHHHHHHcCCCCEEEEEEeccCCcccchHHHHHHHhcCC--CCCCCHHHHHHHHHHcCCeE
Confidence 999999999999999755 5777776521111 111 11122222 23567788888998888863
No 19
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=97.21 E-value=0.00079 Score=51.31 Aligned_cols=94 Identities=14% Similarity=0.101 Sum_probs=68.2
Q ss_pred cceeeecCCchhHhHhhhccccccccccccccccchhHHHHHHHhhc----eeeeeeecCCCCCCCCCccEEEecccccc
Q 024173 102 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKG----IVRVADIKFPLPYRAKSFPLVIVSDALDY 177 (271)
Q Consensus 102 ~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvrKG----iVRvADIkfpLPYR~kSFslVivSDaLDy 177 (271)
.+||.||..+..+...|.+. ..+..|||+.+ +.-..++. +| -+..+|+.-. ....+|++|+.+++|.|
T Consensus 48 ~~vLdiG~G~G~~~~~l~~~-~~~v~~~D~s~--~~~~~a~~---~~~~~~~~~~~d~~~~--~~~~~~D~v~~~~~l~~ 119 (218)
T 3ou2_A 48 GDVLELASGTGYWTRHLSGL-ADRVTALDGSA--EMIAEAGR---HGLDNVEFRQQDLFDW--TPDRQWDAVFFAHWLAH 119 (218)
T ss_dssp SEEEEESCTTSHHHHHHHHH-SSEEEEEESCH--HHHHHHGG---GCCTTEEEEECCTTSC--CCSSCEEEEEEESCGGG
T ss_pred CeEEEECCCCCHHHHHHHhc-CCeEEEEeCCH--HHHHHHHh---cCCCCeEEEecccccC--CCCCceeEEEEechhhc
Confidence 38999999998877777766 66888887643 12222222 34 3455676443 56789999999999999
Q ss_pred cChhhhcccccchhhccc-CceEEEec
Q 024173 178 LSPKYLNKTLPDLARVAS-DGVLIFAG 203 (271)
Q Consensus 178 LspryLNkTLPeLaRvsa-dglViF~G 203 (271)
+.+..+.+.|-++.|+-. +|.++++.
T Consensus 120 ~~~~~~~~~l~~~~~~L~pgG~l~~~~ 146 (218)
T 3ou2_A 120 VPDDRFEAFWESVRSAVAPGGVVEFVD 146 (218)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 999888888999888765 56666665
No 20
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=97.18 E-value=0.001 Score=51.86 Aligned_cols=149 Identities=16% Similarity=0.193 Sum_probs=90.8
Q ss_pred hHhHHHHHHhcccccceeeecCCchhHhHhhhccccccccccccccccchhHHHHHHHh-hc-eeeeeeecCCCCCCCCC
Q 024173 88 RAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVH-KG-IVRVADIKFPLPYRAKS 165 (271)
Q Consensus 88 ~AiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvr-KG-iVRvADIkfpLPYR~kS 165 (271)
..++.|++.-.. -.+||.||..+-.....|.+. ..+..|||+.+ +.-..++.... .+ -+..+|+. .+|+...+
T Consensus 42 ~~~~~l~~~~~~-~~~vLDiG~G~G~~~~~l~~~-~~~v~~vD~s~--~~~~~a~~~~~~~~~~~~~~d~~-~~~~~~~~ 116 (242)
T 3l8d_A 42 TIIPFFEQYVKK-EAEVLDVGCGDGYGTYKLSRT-GYKAVGVDISE--VMIQKGKERGEGPDLSFIKGDLS-SLPFENEQ 116 (242)
T ss_dssp THHHHHHHHSCT-TCEEEEETCTTSHHHHHHHHT-TCEEEEEESCH--HHHHHHHTTTCBTTEEEEECBTT-BCSSCTTC
T ss_pred HHHHHHHHHcCC-CCeEEEEcCCCCHHHHHHHHc-CCeEEEEECCH--HHHHHHHhhcccCCceEEEcchh-cCCCCCCC
Confidence 345566555443 358999999998887777766 56788887643 12222222211 11 24456664 56777899
Q ss_pred ccEEEecccccccChhhhcccccchhhccc-CceEEEec-CCCchhhhHHhhhhcCCc--cccccchhHHHHHHHhcccc
Q 024173 166 FPLVIVSDALDYLSPKYLNKTLPDLARVAS-DGVLIFAG-YPGQQRAKVAELSKFGRP--AKMRSSSWWIRYFVQTSLEE 241 (271)
Q Consensus 166 FslVivSDaLDyLspryLNkTLPeLaRvsa-dglViF~G-~Pgqqrakvaelskfgrp--aK~rsssWW~r~F~qt~LeE 241 (271)
|++|+..+.|.++. ...+.|-++.|+-. +|.++++- .|........-...++.+ ....+...|.+.+.++|++.
T Consensus 117 fD~v~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~ 194 (242)
T 3l8d_A 117 FEAIMAINSLEWTE--EPLRALNEIKRVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFKV 194 (242)
T ss_dssp EEEEEEESCTTSSS--CHHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEEE
T ss_pred ccEEEEcChHhhcc--CHHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCEE
Confidence 99999999999984 33467888888755 56666654 232221111111223333 23345567889999998875
Q ss_pred ch
Q 024173 242 NE 243 (271)
Q Consensus 242 nE 243 (271)
-+
T Consensus 195 ~~ 196 (242)
T 3l8d_A 195 VD 196 (242)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 21
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=97.14 E-value=0.0028 Score=51.43 Aligned_cols=139 Identities=13% Similarity=0.106 Sum_probs=88.9
Q ss_pred HhcccccceeeecCCchhHhHhhhccccccccccccccccchhHHHHHHH-hhce-----eeeeeecCCCCCCCCCccEE
Q 024173 96 AYGDSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLV-HKGI-----VRVADIKFPLPYRAKSFPLV 169 (271)
Q Consensus 96 aYGdsM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLv-rKGi-----VRvADIkfpLPYR~kSFslV 169 (271)
.++..-.+||-||..+......|.+. ..+..|||+.+ +.-..++... ..|+ +..+|+.-..++-..+|++|
T Consensus 64 ~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~--~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v 140 (285)
T 4htf_A 64 EMGPQKLRVLDAGGGEGQTAIKMAER-GHQVILCDLSA--QMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLI 140 (285)
T ss_dssp HTCSSCCEEEEETCTTCHHHHHHHHT-TCEEEEEESCH--HHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEE
T ss_pred hcCCCCCEEEEeCCcchHHHHHHHHC-CCEEEEEECCH--HHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEE
Confidence 34444468999999999888777766 67889998753 2222233322 2233 56677765444778999999
Q ss_pred EecccccccChhhhcccccchhhccc-CceEEEecCCCchhhhH--------Hhhhh--------cCCccccccchhHHH
Q 024173 170 IVSDALDYLSPKYLNKTLPDLARVAS-DGVLIFAGYPGQQRAKV--------AELSK--------FGRPAKMRSSSWWIR 232 (271)
Q Consensus 170 ivSDaLDyLspryLNkTLPeLaRvsa-dglViF~G~Pgqqrakv--------aelsk--------fgrpaK~rsssWW~r 232 (271)
+..+.|.|+.. ..+.|-++.|+-. +|+++++- |....... ..+.. ...+....+...|.+
T Consensus 141 ~~~~~l~~~~~--~~~~l~~~~~~LkpgG~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 217 (285)
T 4htf_A 141 LFHAVLEWVAD--PRSVLQTLWSVLRPGGVLSLMF-YNAHGLLMHNMVAGNFDYVQAGMPKKKKRTLSPDYPRDPTQVYL 217 (285)
T ss_dssp EEESCGGGCSC--HHHHHHHHHHTEEEEEEEEEEE-EBHHHHHHHHHHTTCHHHHHTTCCCC----CCCSCCBCHHHHHH
T ss_pred EECchhhcccC--HHHHHHHHHHHcCCCeEEEEEE-eCCchHHHHHHHhcCHHHHhhhccccccccCCCCCCCCHHHHHH
Confidence 99999999953 3678888888766 45665554 32221100 01110 112335567788999
Q ss_pred HHHHhccc
Q 024173 233 YFVQTSLE 240 (271)
Q Consensus 233 ~F~qt~Le 240 (271)
.+.++|++
T Consensus 218 ~l~~aGf~ 225 (285)
T 4htf_A 218 WLEEAGWQ 225 (285)
T ss_dssp HHHHTTCE
T ss_pred HHHHCCCc
Confidence 99999987
No 22
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=97.13 E-value=0.0024 Score=49.09 Aligned_cols=95 Identities=12% Similarity=0.114 Sum_probs=64.4
Q ss_pred cceeeecCCchhHhHhhhccccccccccccccccchhHHHHHHHh-hceeeeeeecCCCCCCCCCccEEEecccccccCh
Q 024173 102 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVH-KGIVRVADIKFPLPYRAKSFPLVIVSDALDYLSP 180 (271)
Q Consensus 102 ~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvr-KGiVRvADIkfpLPYR~kSFslVivSDaLDyLsp 180 (271)
.+||.||..|......|.+. ..+..|||+.+ +.-..++.... .--+..+|+.-. .-..+|++|+.+++|.|+..
T Consensus 44 ~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~--~~~~~a~~~~~~~v~~~~~d~~~~--~~~~~fD~v~~~~~l~~~~~ 118 (250)
T 2p7i_A 44 GNLLELGSFKGDFTSRLQEH-FNDITCVEASE--EAISHAQGRLKDGITYIHSRFEDA--QLPRRYDNIVLTHVLEHIDD 118 (250)
T ss_dssp SCEEEESCTTSHHHHHHTTT-CSCEEEEESCH--HHHHHHHHHSCSCEEEEESCGGGC--CCSSCEEEEEEESCGGGCSS
T ss_pred CcEEEECCCCCHHHHHHHHh-CCcEEEEeCCH--HHHHHHHHhhhCCeEEEEccHHHc--CcCCcccEEEEhhHHHhhcC
Confidence 47999999999887777655 45788887753 22222333222 223455676543 24678999999999999953
Q ss_pred hhhcccccchh-hccc-CceEEEec
Q 024173 181 KYLNKTLPDLA-RVAS-DGVLIFAG 203 (271)
Q Consensus 181 ryLNkTLPeLa-Rvsa-dglViF~G 203 (271)
..+.|-++. |+-. +|.++++-
T Consensus 119 --~~~~l~~~~~~~LkpgG~l~i~~ 141 (250)
T 2p7i_A 119 --PVALLKRINDDWLAEGGRLFLVC 141 (250)
T ss_dssp --HHHHHHHHHHTTEEEEEEEEEEE
T ss_pred --HHHHHHHHHHHhcCCCCEEEEEc
Confidence 257888888 8754 67776665
No 23
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=97.02 E-value=0.0014 Score=50.55 Aligned_cols=130 Identities=18% Similarity=0.157 Sum_probs=85.3
Q ss_pred cceeeecCCchhHhHhhhccc--ccccccccccc--ccchhHHHHHHHh-hceeeeeeecCCCCCCCCCccEEEeccccc
Q 024173 102 HKVLHVGPDTCSVVSTLLKEE--ETEAWGVEPYD--IEDADARCKSLVH-KGIVRVADIKFPLPYRAKSFPLVIVSDALD 176 (271)
Q Consensus 102 ~kVLHVGPdtC~VVs~LLkEe--~tEAWGVEPyd--ied~d~~CKsLvr-KGiVRvADIkfpLPYR~kSFslVivSDaLD 176 (271)
.+||-+|..+......|++.. +.+.+|||+.+ ++.+..+++..-- +--+..+|+ ..+|+...+|++|+.++.+.
T Consensus 39 ~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~ 117 (219)
T 3dh0_A 39 MTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEE-NKIPLPDNTVDFIFMAFTFH 117 (219)
T ss_dssp CEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBT-TBCSSCSSCEEEEEEESCGG
T ss_pred CEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeccc-ccCCCCCCCeeEEEeehhhh
Confidence 489999999998888888765 56899998643 2333333322211 122455666 35677789999999999999
Q ss_pred ccChhhhcccccchhhcc-cCceEEEecCCCchhhhHHhhhhcCCc-cccccchhHHHHHHHhcccc
Q 024173 177 YLSPKYLNKTLPDLARVA-SDGVLIFAGYPGQQRAKVAELSKFGRP-AKMRSSSWWIRYFVQTSLEE 241 (271)
Q Consensus 177 yLspryLNkTLPeLaRvs-adglViF~G~Pgqqrakvaelskfgrp-aK~rsssWW~r~F~qt~LeE 241 (271)
++. ...+.|-++.|+- .+|.++++..-.... .++.+ ....+..-|.+.+.++|++.
T Consensus 118 ~~~--~~~~~l~~~~~~LkpgG~l~i~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~Gf~~ 175 (219)
T 3dh0_A 118 ELS--EPLKFLEELKRVAKPFAYLAIIDWKKEER-------DKGPPPEEVYSEWEVGLILEDAGIRV 175 (219)
T ss_dssp GCS--SHHHHHHHHHHHEEEEEEEEEEEECSSCC-------SSSCCGGGSCCHHHHHHHHHHTTCEE
T ss_pred hcC--CHHHHHHHHHHHhCCCeEEEEEEeccccc-------ccCCchhcccCHHHHHHHHHHCCCEE
Confidence 994 3467778888754 577888775222111 11222 22345677888888888874
No 24
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=97.01 E-value=0.0014 Score=50.86 Aligned_cols=97 Identities=22% Similarity=0.335 Sum_probs=65.5
Q ss_pred cceeeecCCchhHhHhhhcccccccccccccc--ccchhHHHHHHHhhceeeeeeecCCCCCCCCCccEEEec-cccccc
Q 024173 102 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVS-DALDYL 178 (271)
Q Consensus 102 ~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvrKGiVRvADIkfpLPYR~kSFslVivS-DaLDyL 178 (271)
.+||.+|..+......|.+. .+..|||+.+ ++-+..+.+..-.+--+..+|+. .+|.. .+|++||.. |.+.|+
T Consensus 35 ~~vLdiG~G~G~~~~~l~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~-~~~~~-~~fD~v~~~~~~~~~~ 110 (243)
T 3d2l_A 35 KRIADIGCGTGTATLLLADH--YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMR-ELELP-EPVDAITILCDSLNYL 110 (243)
T ss_dssp CEEEEESCTTCHHHHHHTTT--SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGG-GCCCS-SCEEEEEECTTGGGGC
T ss_pred CeEEEecCCCCHHHHHHhhC--CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChh-hcCCC-CCcCEEEEeCCchhhc
Confidence 68999999998877777766 7888988753 22233333221111234556663 23333 789999987 599999
Q ss_pred -Chhhhcccccchhhc-ccCceEEEe
Q 024173 179 -SPKYLNKTLPDLARV-ASDGVLIFA 202 (271)
Q Consensus 179 -spryLNkTLPeLaRv-sadglViF~ 202 (271)
++.-+.+.|-++.|+ ..+|.+++.
T Consensus 111 ~~~~~~~~~l~~~~~~L~pgG~l~~~ 136 (243)
T 3d2l_A 111 QTEADVKQTFDSAARLLTDGGKLLFD 136 (243)
T ss_dssp CSHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 677788888888886 556777764
No 25
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=97.01 E-value=0.0013 Score=50.57 Aligned_cols=99 Identities=16% Similarity=0.302 Sum_probs=69.7
Q ss_pred ccceeeecCCchhHhHhhhccccccccccccccccchhHHHHHHHh-hce---------eeeeeecCCCCCCCCCccEEE
Q 024173 101 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVH-KGI---------VRVADIKFPLPYRAKSFPLVI 170 (271)
Q Consensus 101 M~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvr-KGi---------VRvADIkfpLPYR~kSFslVi 170 (271)
-.+||.+|..+..+...|++. ..+..|||+.+ +.-..++...+ .|+ +..+|+. .+|+...+|++|+
T Consensus 31 ~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~--~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~~D~v~ 106 (235)
T 3sm3_A 31 DDEILDIGCGSGKISLELASK-GYSVTGIDINS--EAIRLAETAARSPGLNQKTGGKAEFKVENAS-SLSFHDSSFDFAV 106 (235)
T ss_dssp TCEEEEETCTTSHHHHHHHHT-TCEEEEEESCH--HHHHHHHHHTTCCSCCSSSSCEEEEEECCTT-SCCSCTTCEEEEE
T ss_pred CCeEEEECCCCCHHHHHHHhC-CCeEEEEECCH--HHHHHHHHHHHhcCCccccCcceEEEEeccc-ccCCCCCceeEEE
Confidence 458999999999888888776 56788887642 12223333222 232 4456664 4677789999999
Q ss_pred ecccccccC-hhhhcccccchhhcc-cCceEEEec
Q 024173 171 VSDALDYLS-PKYLNKTLPDLARVA-SDGVLIFAG 203 (271)
Q Consensus 171 vSDaLDyLs-pryLNkTLPeLaRvs-adglViF~G 203 (271)
.++.+.++. |...-+.|.++.|+- .+|.++++.
T Consensus 107 ~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (235)
T 3sm3_A 107 MQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVE 141 (235)
T ss_dssp EESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEE
Confidence 999999994 676667888888864 467777765
No 26
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=96.95 E-value=0.0031 Score=51.23 Aligned_cols=134 Identities=13% Similarity=0.165 Sum_probs=85.4
Q ss_pred ccceeeecCCchhHhHhhhccccccccccccccccchhHHHHHHHhhceeeeeeecCCCCCCCCCccEEEecccccccCh
Q 024173 101 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYLSP 180 (271)
Q Consensus 101 M~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvrKGiVRvADIkfpLPYR~kSFslVivSDaLDyLsp 180 (271)
-.+||-||-.+-.....|.+ ...+..||++.+- .-..++.....--+.++|+.- +|+ ..+|++|+.++++.++..
T Consensus 58 ~~~vLDiGcG~G~~~~~l~~-~~~~v~gvD~s~~--~~~~a~~~~~~~~~~~~d~~~-~~~-~~~fD~v~~~~~l~~~~d 132 (279)
T 3ccf_A 58 GEFILDLGCGTGQLTEKIAQ-SGAEVLGTDNAAT--MIEKARQNYPHLHFDVADARN-FRV-DKPLDAVFSNAMLHWVKE 132 (279)
T ss_dssp TCEEEEETCTTSHHHHHHHH-TTCEEEEEESCHH--HHHHHHHHCTTSCEEECCTTT-CCC-SSCEEEEEEESCGGGCSC
T ss_pred CCEEEEecCCCCHHHHHHHh-CCCeEEEEECCHH--HHHHHHhhCCCCEEEECChhh-CCc-CCCcCEEEEcchhhhCcC
Confidence 35899999999888877776 6678889887531 111222221233466778754 666 689999999999999852
Q ss_pred hhhcccccchhhccc-CceEEEec-CCCch---hhhHH-hhhhcC-------CccccccchhHHHHHHHhcccc
Q 024173 181 KYLNKTLPDLARVAS-DGVLIFAG-YPGQQ---RAKVA-ELSKFG-------RPAKMRSSSWWIRYFVQTSLEE 241 (271)
Q Consensus 181 ryLNkTLPeLaRvsa-dglViF~G-~Pgqq---rakva-elskfg-------rpaK~rsssWW~r~F~qt~LeE 241 (271)
..+.|.++.|+-. +|.++++- .++.. ..... .+.+.| .|....+...|.+.+.++|++.
T Consensus 133 --~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~ 204 (279)
T 3ccf_A 133 --PEAAIASIHQALKSGGRFVAEFGGKGNIKYILEALYNALETLGIHNPQALNPWYFPSIGEYVNILEKQGFDV 204 (279)
T ss_dssp --HHHHHHHHHHHEEEEEEEEEEEECTTTTHHHHHHHHHHHHHHTCCCGGGGCCCCCCCHHHHHHHHHHHTEEE
T ss_pred --HHHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHHHHhcCCccccCcCceeCCCHHHHHHHHHHcCCEE
Confidence 4577888888865 56666643 22221 11111 122333 2344566777888888888753
No 27
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=96.92 E-value=0.0014 Score=51.21 Aligned_cols=100 Identities=15% Similarity=0.143 Sum_probs=69.4
Q ss_pred cccceeeecCCchhHhHhhhccc-cccccccccccccchhHHHHHHHh---hceeeeeeecCCCCCCCCCccEEEecccc
Q 024173 100 SMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLVH---KGIVRVADIKFPLPYRAKSFPLVIVSDAL 175 (271)
Q Consensus 100 sM~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEPydied~d~~CKsLvr---KGiVRvADIkfpLPYR~kSFslVivSDaL 175 (271)
.-.+||.||..+......|++.- ..+..|||+.+ +.-..++.... +--+..+|+. .+|.. .+|++|+.++++
T Consensus 44 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~--~~~~~a~~~~~~~~~~~~~~~d~~-~~~~~-~~fD~v~~~~~l 119 (234)
T 3dtn_A 44 ENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSE--KMLEIAKNRFRGNLKVKYIEADYS-KYDFE-EKYDMVVSALSI 119 (234)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCH--HHHHHHHHHTCSCTTEEEEESCTT-TCCCC-SCEEEEEEESCG
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCH--HHHHHHHHhhccCCCEEEEeCchh-ccCCC-CCceEEEEeCcc
Confidence 34789999999999888887764 67888888743 12222333222 2234456663 33444 899999999999
Q ss_pred cccChhhhcccccchhhcc-cCceEEEec
Q 024173 176 DYLSPKYLNKTLPDLARVA-SDGVLIFAG 203 (271)
Q Consensus 176 DyLspryLNkTLPeLaRvs-adglViF~G 203 (271)
.++++.-....|-++.|+- .+|.++++-
T Consensus 120 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 148 (234)
T 3dtn_A 120 HHLEDEDKKELYKRSYSILKESGIFINAD 148 (234)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccCCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 9998877667888888864 567777654
No 28
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=96.90 E-value=0.0044 Score=49.48 Aligned_cols=134 Identities=16% Similarity=0.200 Sum_probs=83.6
Q ss_pred cccceeeecCCchhHhHhhhcccccccccccccc--ccchhHHHHHHHhhc----eeeeeeecCCCCCCCCCccEEEecc
Q 024173 100 SMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKG----IVRVADIKFPLPYRAKSFPLVIVSD 173 (271)
Q Consensus 100 sM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvrKG----iVRvADIkfpLPYR~kSFslVivSD 173 (271)
.-.+||-||..+-.+...|.+.. .+..||++.+ ++-+..+++ +.| -+.++|+. .+|+...+|++|+...
T Consensus 37 ~~~~vLDiGcG~G~~~~~l~~~~-~~v~gvD~s~~~l~~a~~~~~---~~~~~~v~~~~~d~~-~l~~~~~~fD~V~~~~ 111 (260)
T 1vl5_A 37 GNEEVLDVATGGGHVANAFAPFV-KKVVAFDLTEDILKVARAFIE---GNGHQQVEYVQGDAE-QMPFTDERFHIVTCRI 111 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHGGGS-SEEEEEESCHHHHHHHHHHHH---HTTCCSEEEEECCC--CCCSCTTCEEEEEEES
T ss_pred CCCEEEEEeCCCCHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHH---hcCCCceEEEEecHH-hCCCCCCCEEEEEEhh
Confidence 34589999999888776666554 4888888653 222322222 223 24567774 3677788999999999
Q ss_pred cccccChhhhcccccchhhcc-cCceEEEec--CCCch--hhhHHhhhhcC--CccccccchhHHHHHHHhccc
Q 024173 174 ALDYLSPKYLNKTLPDLARVA-SDGVLIFAG--YPGQQ--RAKVAELSKFG--RPAKMRSSSWWIRYFVQTSLE 240 (271)
Q Consensus 174 aLDyLspryLNkTLPeLaRvs-adglViF~G--~Pgqq--rakvaelskfg--rpaK~rsssWW~r~F~qt~Le 240 (271)
+|.++.. ..+.|.++.|+- .+|.++++. .|+.. +.-...+.++. ......+..-|.+.+.++|++
T Consensus 112 ~l~~~~d--~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~ 183 (260)
T 1vl5_A 112 AAHHFPN--PASFVSEAYRVLKKGGQLLLVDNSAPENDAFDVFYNYVEKERDYSHHRAWKKSDWLKMLEEAGFE 183 (260)
T ss_dssp CGGGCSC--HHHHHHHHHHHEEEEEEEEEEEEEBCSSHHHHHHHHHHHHHHCTTCCCCCBHHHHHHHHHHHTCE
T ss_pred hhHhcCC--HHHHHHHHHHHcCCCCEEEEEEcCCCCCHHHHHHHHHHHHhcCccccCCCCHHHHHHHHHHCCCe
Confidence 9999953 357888898875 567887763 44431 11111111221 123445566677777777765
No 29
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=96.89 E-value=0.0029 Score=51.20 Aligned_cols=96 Identities=14% Similarity=0.184 Sum_probs=69.2
Q ss_pred cceeeecCCchhHhHhhhccccccccccccccccchhHHHHHHHh-hc-----eeeeeeecCCCCCCCCCccEEEecccc
Q 024173 102 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVH-KG-----IVRVADIKFPLPYRAKSFPLVIVSDAL 175 (271)
Q Consensus 102 ~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvr-KG-----iVRvADIkfpLPYR~kSFslVivSDaL 175 (271)
.+||.||-.+-.....|.++-..+..||++.+ +.-..++.... .| -+..+|+ ..+| .+|++|+..++|
T Consensus 66 ~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~--~~~~~a~~~~~~~~~~~~~~~~~~d~-~~~~---~~fD~v~~~~~l 139 (287)
T 1kpg_A 66 MTLLDVGCGWGATMMRAVEKYDVNVVGLTLSK--NQANHVQQLVANSENLRSKRVLLAGW-EQFD---EPVDRIVSIGAF 139 (287)
T ss_dssp CEEEEETCTTSHHHHHHHHHHCCEEEEEESCH--HHHHHHHHHHHTCCCCSCEEEEESCG-GGCC---CCCSEEEEESCG
T ss_pred CEEEEECCcccHHHHHHHHHcCCEEEEEECCH--HHHHHHHHHHHhcCCCCCeEEEECCh-hhCC---CCeeEEEEeCch
Confidence 58999999998888888766556888887642 12222333322 12 2456777 3566 899999999999
Q ss_pred cccChhhhcccccchhhcc-cCceEEEec
Q 024173 176 DYLSPKYLNKTLPDLARVA-SDGVLIFAG 203 (271)
Q Consensus 176 DyLspryLNkTLPeLaRvs-adglViF~G 203 (271)
.++.+....+.|-++.|+- .+|.+++..
T Consensus 140 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 168 (287)
T 1kpg_A 140 EHFGHERYDAFFSLAHRLLPADGVMLLHT 168 (287)
T ss_dssp GGTCTTTHHHHHHHHHHHSCTTCEEEEEE
T ss_pred hhcChHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 9999888888999999875 466766654
No 30
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=96.84 E-value=0.0019 Score=53.77 Aligned_cols=135 Identities=13% Similarity=0.125 Sum_probs=87.5
Q ss_pred ccceeeecCCchhHhHhhhcccccccccccccc--ccchhHHHHHHHh--hceeeeeeecCCCCCCCCCccEEEeccccc
Q 024173 101 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVH--KGIVRVADIKFPLPYRAKSFPLVIVSDALD 176 (271)
Q Consensus 101 M~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvr--KGiVRvADIkfpLPYR~kSFslVivSDaLD 176 (271)
-.+||-+|-.+-.....|.+.-..+..|||+.+ ++.+..+++..-- +--+..+|+. .+|+...+|++|+..+++.
T Consensus 118 ~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~~~~~~fD~V~~~~~l~ 196 (312)
T 3vc1_A 118 DDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNML-DTPFDKGAVTASWNNESTM 196 (312)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTT-SCCCCTTCEEEEEEESCGG
T ss_pred CCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChh-cCCCCCCCEeEEEECCchh
Confidence 358999999998887777765356788988643 3444444443211 1234567774 5778889999999999999
Q ss_pred ccChhhhcccccchhhcc-cCceEEEecC-CC----chhhhHHhhhhcCCccccccchhHHHHHHHhccc
Q 024173 177 YLSPKYLNKTLPDLARVA-SDGVLIFAGY-PG----QQRAKVAELSKFGRPAKMRSSSWWIRYFVQTSLE 240 (271)
Q Consensus 177 yLspryLNkTLPeLaRvs-adglViF~G~-Pg----qqrakvaelskfgrpaK~rsssWW~r~F~qt~Le 240 (271)
++. +.+.|.++.|+- .+|.++++.. +. ........+...-.+ .+.+..-|.+.+.++|++
T Consensus 197 ~~~---~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~l~~aGf~ 262 (312)
T 3vc1_A 197 YVD---LHDLFSEHSRFLKVGGRYVTITGCWNPRYGQPSKWVSQINAHFEC-NIHSRREYLRAMADNRLV 262 (312)
T ss_dssp GSC---HHHHHHHHHHHEEEEEEEEEEEEEECTTTCSCCHHHHHHHHHHTC-CCCBHHHHHHHHHTTTEE
T ss_pred hCC---HHHHHHHHHHHcCCCcEEEEEEccccccccchhHHHHHHHhhhcC-CCCCHHHHHHHHHHCCCE
Confidence 995 777888888864 4677766651 11 111222223222112 366777788888888876
No 31
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=96.84 E-value=0.0068 Score=48.35 Aligned_cols=148 Identities=20% Similarity=0.251 Sum_probs=87.1
Q ss_pred HHHHHHhc-ccccceeeecCCchhHhHhhhcccccccccccccc--ccchhHHHHHHH--hhceeeeeeecCCCCCCCCC
Q 024173 91 PILKKAYG-DSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV--HKGIVRVADIKFPLPYRAKS 165 (271)
Q Consensus 91 P~LkkaYG-dsM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLv--rKGiVRvADIkfpLPYR~kS 165 (271)
..|-+..+ ..-.+||-||-.+-.....|.+.-..+..||++.+ ++-+..+++..- .+--+..+|+. .+|+...+
T Consensus 51 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~ 129 (273)
T 3bus_A 51 DEMIALLDVRSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYADAM-DLPFEDAS 129 (273)
T ss_dssp HHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTT-SCCSCTTC
T ss_pred HHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccc-cCCCCCCC
Confidence 33333333 23458999999998888888776567888887643 222333332210 01234556663 46777889
Q ss_pred ccEEEecccccccChhhhcccccchhhccc-CceEEEecC----CC--chhhhHHhhhhcCCccccccchhHHHHHHHhc
Q 024173 166 FPLVIVSDALDYLSPKYLNKTLPDLARVAS-DGVLIFAGY----PG--QQRAKVAELSKFGRPAKMRSSSWWIRYFVQTS 238 (271)
Q Consensus 166 FslVivSDaLDyLspryLNkTLPeLaRvsa-dglViF~G~----Pg--qqrakvaelskfgrpaK~rsssWW~r~F~qt~ 238 (271)
|++|+..+++.++... .+.|-++.|+-. +|.++++.. |- ..+..............+.+..-|.+.+.++|
T Consensus 130 fD~v~~~~~l~~~~~~--~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG 207 (273)
T 3bus_A 130 FDAVWALESLHHMPDR--GRALREMARVLRPGGTVAIADFVLLAPVEGAKKEAVDAFRAGGGVLSLGGIDEYESDVRQAE 207 (273)
T ss_dssp EEEEEEESCTTTSSCH--HHHHHHHHTTEEEEEEEEEEEEEESSCCCHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHTT
T ss_pred ccEEEEechhhhCCCH--HHHHHHHHHHcCCCeEEEEEEeeccCCCChhHHHHHHHHHhhcCccCCCCHHHHHHHHHHcC
Confidence 9999999999999543 567788888754 566666541 11 11111111111111224556666777777777
Q ss_pred ccc
Q 024173 239 LEE 241 (271)
Q Consensus 239 LeE 241 (271)
++.
T Consensus 208 f~~ 210 (273)
T 3bus_A 208 LVV 210 (273)
T ss_dssp CEE
T ss_pred CeE
Confidence 753
No 32
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=96.81 E-value=0.003 Score=48.77 Aligned_cols=103 Identities=19% Similarity=0.311 Sum_probs=68.7
Q ss_pred hcccccceeeecCCchhHhHhhhcccccccccccccc--ccchhHHHHHHHhhceeeeeeecCCCCCCCCCccEEEecc-
Q 024173 97 YGDSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSD- 173 (271)
Q Consensus 97 YGdsM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvrKGiVRvADIkfpLPYR~kSFslVivSD- 173 (271)
++..-.+||.+|..+......|.+. ..+..|||+.+ ++-+..+++..-.+--+..+|+. .+|.. .+|++||.+.
T Consensus 34 ~~~~~~~vLdiG~G~G~~~~~l~~~-~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~-~~~~~-~~fD~v~~~~~ 110 (246)
T 1y8c_A 34 NNLVFDDYLDLACGTGNLTENLCPK-FKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDIS-NLNIN-RKFDLITCCLD 110 (246)
T ss_dssp TTCCTTEEEEETCTTSTTHHHHGGG-SSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGG-GCCCS-CCEEEEEECTT
T ss_pred hCCCCCeEEEeCCCCCHHHHHHHHC-CCcEEEEECCHHHHHHHHHHHhhcCCCeEEEecccc-cCCcc-CCceEEEEcCc
Confidence 3445578999999999988877766 45788887643 22232222211001234556663 23443 7899999996
Q ss_pred ccccc-Chhhhcccccchhhcc-cCceEEEe
Q 024173 174 ALDYL-SPKYLNKTLPDLARVA-SDGVLIFA 202 (271)
Q Consensus 174 aLDyL-spryLNkTLPeLaRvs-adglViF~ 202 (271)
+|.|+ ++..+.+.|-++.|+- .+|.+++.
T Consensus 111 ~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 141 (246)
T 1y8c_A 111 STNYIIDSDDLKKYFKAVSNHLKEGGVFIFD 141 (246)
T ss_dssp GGGGCCSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred cccccCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 99999 6678888999999875 46777764
No 33
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=96.74 E-value=0.0023 Score=51.92 Aligned_cols=103 Identities=10% Similarity=0.056 Sum_probs=71.2
Q ss_pred ccceeeecCCchhHhHhhhcccccccccccccc--ccchhHHHHHHHhhceeeeeeecCCCCCCCCCccEEEeccccccc
Q 024173 101 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYL 178 (271)
Q Consensus 101 M~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvrKGiVRvADIkfpLPYR~kSFslVivSDaLDyL 178 (271)
-.+||.+|-.+-.....|.+. ..+..|||+.+ ++-+..+++..--+--+..+|+.-. |. ..+|++||.+..+.|+
T Consensus 121 ~~~vLD~GcG~G~~~~~l~~~-g~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~-~~-~~~fD~i~~~~~~~~~ 197 (286)
T 3m70_A 121 PCKVLDLGCGQGRNSLYLSLL-GYDVTSWDHNENSIAFLNETKEKENLNISTALYDINAA-NI-QENYDFIVSTVVFMFL 197 (286)
T ss_dssp SCEEEEESCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGC-CC-CSCEEEEEECSSGGGS
T ss_pred CCcEEEECCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccc-cc-cCCccEEEEccchhhC
Confidence 458999999998877777766 55888887643 2333333332111223555677532 33 8899999999999999
Q ss_pred Chhhhcccccchhhcc-cCceEEEecCCC
Q 024173 179 SPKYLNKTLPDLARVA-SDGVLIFAGYPG 206 (271)
Q Consensus 179 spryLNkTLPeLaRvs-adglViF~G~Pg 206 (271)
++..+.+.|.++.|+- .+|++++.....
T Consensus 198 ~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 226 (286)
T 3m70_A 198 NRERVPSIIKNMKEHTNVGGYNLIVAAMS 226 (286)
T ss_dssp CGGGHHHHHHHHHHTEEEEEEEEEEEEBC
T ss_pred CHHHHHHHHHHHHHhcCCCcEEEEEEecC
Confidence 9999999999998875 467756654433
No 34
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=96.69 E-value=0.0031 Score=49.60 Aligned_cols=135 Identities=13% Similarity=0.056 Sum_probs=84.8
Q ss_pred ccceeeecCCchhHhHhhhccccccccccccccccchhHHHHHHHhhc--------------------------------
Q 024173 101 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKG-------------------------------- 148 (271)
Q Consensus 101 M~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvrKG-------------------------------- 148 (271)
-.+||.+|-.+-.....|.+....+..||++.+ +.-..++...++.
T Consensus 57 ~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~--~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 134 (265)
T 2i62_A 57 GELLIDIGSGPTIYQLLSACESFTEIIVSDYTD--QNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRR 134 (265)
T ss_dssp EEEEEEESCTTCCGGGTTGGGTEEEEEEEESCH--HHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHH
T ss_pred CCEEEEECCCccHHHHHHhhcccCeEEEecCCH--HHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhh
Confidence 357999999996554444444334778887643 1112222222211
Q ss_pred ---eeeeeeecCCCCCCC---CCccEEEecccccccChh--hhcccccchhhc-ccCceEEEecCCCchhhhHHhhhhcC
Q 024173 149 ---IVRVADIKFPLPYRA---KSFPLVIVSDALDYLSPK--YLNKTLPDLARV-ASDGVLIFAGYPGQQRAKVAELSKFG 219 (271)
Q Consensus 149 ---iVRvADIkfpLPYR~---kSFslVivSDaLDyLspr--yLNkTLPeLaRv-sadglViF~G~Pgqqrakvaelskfg 219 (271)
-+..+|+.-..|.-. .+|++||.+.+|.++.|. .+.+.|-++.|+ ..+|.+|++...+.. ....|
T Consensus 135 ~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~------~~~~~ 208 (265)
T 2i62_A 135 AIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSS------YYMIG 208 (265)
T ss_dssp HEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCC------EEEET
T ss_pred hheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCc------eEEcC
Confidence 256678876666555 899999999999988776 677788888886 457788887744432 11112
Q ss_pred C---ccccccchhHHHHHHHhccccch
Q 024173 220 R---PAKMRSSSWWIRYFVQTSLEENE 243 (271)
Q Consensus 220 r---paK~rsssWW~r~F~qt~LeEnE 243 (271)
. ....-+...|.+.|.++|++.-+
T Consensus 209 ~~~~~~~~~~~~~~~~~l~~aGf~~~~ 235 (265)
T 2i62_A 209 EQKFSSLPLGWETVRDAVEEAGYTIEQ 235 (265)
T ss_dssp TEEEECCCCCHHHHHHHHHHTTCEEEE
T ss_pred CccccccccCHHHHHHHHHHCCCEEEE
Confidence 1 11223455899999999986543
No 35
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=96.68 E-value=0.0072 Score=49.96 Aligned_cols=136 Identities=9% Similarity=0.123 Sum_probs=86.3
Q ss_pred ccceeeecCCchhHhHhhhccccccccccccccccchhHHHHHHHhh-c-----eeeeeeecCCCCCCCCCccEEEeccc
Q 024173 101 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHK-G-----IVRVADIKFPLPYRAKSFPLVIVSDA 174 (271)
Q Consensus 101 M~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvrK-G-----iVRvADIkfpLPYR~kSFslVivSDa 174 (271)
-.+||.||-.+-.....|.+.-+.+..|||+.+ +.-..++....+ | -+..+|+ ..+| .+|++|+..++
T Consensus 91 ~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~--~~~~~a~~~~~~~~~~~~v~~~~~d~-~~~~---~~fD~v~~~~~ 164 (318)
T 2fk8_A 91 GMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSK--NQHARCEQVLASIDTNRSRQVLLQGW-EDFA---EPVDRIVSIEA 164 (318)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHCCEEEEEESCH--HHHHHHHHHHHTSCCSSCEEEEESCG-GGCC---CCCSEEEEESC
T ss_pred cCEEEEEcccchHHHHHHHHHCCCEEEEEECCH--HHHHHHHHHHHhcCCCCceEEEECCh-HHCC---CCcCEEEEeCh
Confidence 358999999998777777765355788887642 122233333322 3 2345666 3445 78999999999
Q ss_pred ccccChhhhcccccchhhcc-cCceEEEec-CCCchhhh--------------HHhhhhcCCc-cccccchhHHHHHHHh
Q 024173 175 LDYLSPKYLNKTLPDLARVA-SDGVLIFAG-YPGQQRAK--------------VAELSKFGRP-AKMRSSSWWIRYFVQT 237 (271)
Q Consensus 175 LDyLspryLNkTLPeLaRvs-adglViF~G-~Pgqqrak--------------vaelskfgrp-aK~rsssWW~r~F~qt 237 (271)
+.|+.+..+.+.|-++.|+- .+|.++++- .+...... ..-+.+.--| ..+.+..-|.+.+.++
T Consensus 165 l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~a 244 (318)
T 2fk8_A 165 FEHFGHENYDDFFKRCFNIMPADGRMTVQSSVSYHPYEMAARGKKLSFETARFIKFIVTEIFPGGRLPSTEMMVEHGEKA 244 (318)
T ss_dssp GGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHHTSTTCCCCCHHHHHHHHHHT
T ss_pred HHhcCHHHHHHHHHHHHHhcCCCcEEEEEEeccCCchhhhhccccccccccchhhHHHHhcCCCCcCCCHHHHHHHHHhC
Confidence 99999888889999999865 466776654 22221110 0112222112 2456788888999988
Q ss_pred ccccc
Q 024173 238 SLEEN 242 (271)
Q Consensus 238 ~LeEn 242 (271)
|++.-
T Consensus 245 Gf~~~ 249 (318)
T 2fk8_A 245 GFTVP 249 (318)
T ss_dssp TCBCC
T ss_pred CCEEE
Confidence 88644
No 36
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=96.63 E-value=0.0044 Score=50.14 Aligned_cols=129 Identities=15% Similarity=0.063 Sum_probs=82.8
Q ss_pred cccceeeecCCchhHhHhhhcccccccccccccc--ccchhHHHHHHHhhceeeeeeecCCCCCCCCCccEEEecccccc
Q 024173 100 SMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDY 177 (271)
Q Consensus 100 sM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvrKGiVRvADIkfpLPYR~kSFslVivSDaLDy 177 (271)
.-.+||-||-.|-.....|.+ ...+..||++.+ ++-+..++ .--+.++|+. .+|+...+|++|+...++.+
T Consensus 34 ~~~~vLDiGcG~G~~~~~l~~-~~~~v~gvD~s~~~~~~a~~~~-----~~~~~~~d~~-~~~~~~~~fD~v~~~~~l~~ 106 (261)
T 3ege_A 34 KGSVIADIGAGTGGYSVALAN-QGLFVYAVEPSIVMRQQAVVHP-----QVEWFTGYAE-NLALPDKSVDGVISILAIHH 106 (261)
T ss_dssp TTCEEEEETCTTSHHHHHHHT-TTCEEEEECSCHHHHHSSCCCT-----TEEEECCCTT-SCCSCTTCBSEEEEESCGGG
T ss_pred CCCEEEEEcCcccHHHHHHHh-CCCEEEEEeCCHHHHHHHHhcc-----CCEEEECchh-hCCCCCCCEeEEEEcchHhh
Confidence 456899999999888777776 567899998765 11111111 2234567774 57888899999999999999
Q ss_pred cChhhhcccccchhhcccCc-eEEEecCCCchhhh-----HHhhh-hcCCccccccchhHHHHHHHhccc
Q 024173 178 LSPKYLNKTLPDLARVASDG-VLIFAGYPGQQRAK-----VAELS-KFGRPAKMRSSSWWIRYFVQTSLE 240 (271)
Q Consensus 178 LspryLNkTLPeLaRvsadg-lViF~G~Pgqqrak-----vaels-kfgrpaK~rsssWW~r~F~qt~Le 240 (271)
+ ....+.|-++.|+-.+| ++|++-.|...... ..++. ..+ ....+..++. .+.++|++
T Consensus 107 ~--~~~~~~l~~~~~~LkgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~l~~aGF~ 171 (261)
T 3ege_A 107 F--SHLEKSFQEMQRIIRDGTIVLLTFDIRLAQRIWLYDYFPFLWEDAL--RFLPLDEQIN-LLQENTKR 171 (261)
T ss_dssp C--SSHHHHHHHHHHHBCSSCEEEEEECGGGCCCCGGGGTCHHHHHHHH--TSCCHHHHHH-HHHHHHCS
T ss_pred c--cCHHHHHHHHHHHhCCcEEEEEEcCCchhHHHHHHHHHHHHhhhhh--hhCCCHHHHH-HHHHcCCC
Confidence 8 34567888888887777 55555444332211 11111 111 2244556666 77777774
No 37
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=96.60 E-value=0.0052 Score=49.14 Aligned_cols=112 Identities=17% Similarity=0.190 Sum_probs=76.8
Q ss_pred HHHhHhHHHHHHhcccccceeeecCCchhHhHhhhccccccccccccccccchhHHHHHHHhhceeeeeeecCCCCCCCC
Q 024173 85 EIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAK 164 (271)
Q Consensus 85 eV~~AiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvrKGiVRvADIkfpLPYR~k 164 (271)
.....+..|.+... .-.+||.||-.+......|.+. ..+..|||+.+ +.-..++....+--+..+|+.- +|. ..
T Consensus 36 ~~~~~~~~l~~~~~-~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~--~~~~~a~~~~~~~~~~~~d~~~-~~~-~~ 109 (263)
T 3pfg_A 36 EAADLAALVRRHSP-KAASLLDVACGTGMHLRHLADS-FGTVEGLELSA--DMLAIARRRNPDAVLHHGDMRD-FSL-GR 109 (263)
T ss_dssp HHHHHHHHHHHHCT-TCCEEEEETCTTSHHHHHHTTT-SSEEEEEESCH--HHHHHHHHHCTTSEEEECCTTT-CCC-SC
T ss_pred HHHHHHHHHHhhCC-CCCcEEEeCCcCCHHHHHHHHc-CCeEEEEECCH--HHHHHHHhhCCCCEEEECChHH-CCc-cC
Confidence 34444555555433 3368999999999988888766 45788887642 2333344333333456677743 455 78
Q ss_pred CccEEEecc-ccccc-Chhhhcccccchhhcc-cCceEEEe
Q 024173 165 SFPLVIVSD-ALDYL-SPKYLNKTLPDLARVA-SDGVLIFA 202 (271)
Q Consensus 165 SFslVivSD-aLDyL-spryLNkTLPeLaRvs-adglViF~ 202 (271)
+|++||.+. .|.|+ +|..+.+.|-++.|+- .+|.+++.
T Consensus 110 ~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 110 RFSAVTCMFSSIGHLAGQAELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp CEEEEEECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred CcCEEEEcCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 999999997 99999 5677888899998874 56777775
No 38
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=96.58 E-value=0.0022 Score=47.23 Aligned_cols=109 Identities=12% Similarity=0.106 Sum_probs=72.5
Q ss_pred ccceeeecCCchhHhHhhhcccccccccccccc--ccchhHHHHHHH-hhceeeeeeecCCCCCCCCCccEEEecccccc
Q 024173 101 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV-HKGIVRVADIKFPLPYRAKSFPLVIVSDALDY 177 (271)
Q Consensus 101 M~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLv-rKGiVRvADIkfpLPYR~kSFslVivSDaLDy 177 (271)
-.+||.+|..+..+...|.+ ...+..|||+.+ ++-+..+++..- .+--+..+|+.-+ +...+|++|+..+.
T Consensus 36 ~~~vLdiG~G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~--~~~~~~D~i~~~~~--- 109 (183)
T 2yxd_A 36 DDVVVDVGCGSGGMTVEIAK-RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAEDV--LDKLEFNKAFIGGT--- 109 (183)
T ss_dssp TCEEEEESCCCSHHHHHHHT-TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHHH--GGGCCCSEEEECSC---
T ss_pred CCEEEEeCCCCCHHHHHHHh-cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCcccc--ccCCCCcEEEECCc---
Confidence 35899999999988888877 777888888653 333333333221 0112445666544 44479999999887
Q ss_pred cChhhhcccccchhhcccCceEEEec-CCCchhhhHHhhhhcC
Q 024173 178 LSPKYLNKTLPDLARVASDGVLIFAG-YPGQQRAKVAELSKFG 219 (271)
Q Consensus 178 LspryLNkTLPeLaRvsadglViF~G-~Pgqqrakvaelskfg 219 (271)
..+.+.+.++.|+ .+|.++++. .+.+...-...+.+.|
T Consensus 110 ---~~~~~~l~~~~~~-~gG~l~~~~~~~~~~~~~~~~l~~~g 148 (183)
T 2yxd_A 110 ---KNIEKIIEILDKK-KINHIVANTIVLENAAKIINEFESRG 148 (183)
T ss_dssp ---SCHHHHHHHHHHT-TCCEEEEEESCHHHHHHHHHHHHHTT
T ss_pred ---ccHHHHHHHHhhC-CCCEEEEEecccccHHHHHHHHHHcC
Confidence 4556778889999 999999887 4444444445555555
No 39
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=96.57 E-value=0.0053 Score=47.52 Aligned_cols=110 Identities=15% Similarity=0.277 Sum_probs=73.8
Q ss_pred hHhHHHHHHhcccccceeeecCCchhHhHhhhccccccccccccccccchhHHHHHHHhhceeeeeeecCCCCCCCCCcc
Q 024173 88 RAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFP 167 (271)
Q Consensus 88 ~AiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvrKGiVRvADIkfpLPYR~kSFs 167 (271)
....+|++.. ..-.+||.+|..+......|.+... +..|||+.+ +.-..++....+--+..+|+. .+|. ..+|+
T Consensus 29 ~~~~~l~~~~-~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~--~~~~~a~~~~~~~~~~~~d~~-~~~~-~~~~D 102 (239)
T 3bxo_A 29 DIADLVRSRT-PEASSLLDVACGTGTHLEHFTKEFG-DTAGLELSE--DMLTHARKRLPDATLHQGDMR-DFRL-GRKFS 102 (239)
T ss_dssp HHHHHHHHHC-TTCCEEEEETCTTSHHHHHHHHHHS-EEEEEESCH--HHHHHHHHHCTTCEEEECCTT-TCCC-SSCEE
T ss_pred HHHHHHHHhc-CCCCeEEEecccCCHHHHHHHHhCC-cEEEEeCCH--HHHHHHHHhCCCCEEEECCHH-Hccc-CCCCc
Confidence 3444555543 4456899999999998888876643 788877642 122233332223345567764 3455 78999
Q ss_pred EEE-eccccccc-Chhhhcccccchhhcc-cCceEEEec
Q 024173 168 LVI-VSDALDYL-SPKYLNKTLPDLARVA-SDGVLIFAG 203 (271)
Q Consensus 168 lVi-vSDaLDyL-spryLNkTLPeLaRvs-adglViF~G 203 (271)
+|+ ..+++.|+ +|..+.+.|-++.|+- .+|.++++-
T Consensus 103 ~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (239)
T 3bxo_A 103 AVVSMFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEP 141 (239)
T ss_dssp EEEECTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred EEEEcCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 999 56799998 5678888888888874 567887763
No 40
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=96.55 E-value=0.013 Score=49.25 Aligned_cols=116 Identities=16% Similarity=0.251 Sum_probs=81.0
Q ss_pred HHHHhHhHHHHHHhcccccceeeecCCchhHhHhhhcc---cccccccccccc--ccchhHHHHHHHhhce--eeeeeec
Q 024173 84 SEIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKE---EETEAWGVEPYD--IEDADARCKSLVHKGI--VRVADIK 156 (271)
Q Consensus 84 ~eV~~AiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkE---e~tEAWGVEPyd--ied~d~~CKsLvrKGi--VRvADIk 156 (271)
.++++.|-.|-+.|-..=.+||-+|-.|-...-.|++. .+.+.-||++.+ |+-|..+++..-...- +..+|+.
T Consensus 54 ~~~~~~i~~l~~~~~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~ 133 (261)
T 4gek_A 54 SNIISMIGMLAERFVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIR 133 (261)
T ss_dssp HHHHHHHHHHHHHHCCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccc
Confidence 45666777777777666678999999988777666653 455778887654 4444444443322222 3346763
Q ss_pred CCCCCCCCCccEEEecccccccChhhhcccccchhhc-ccCceEEEe
Q 024173 157 FPLPYRAKSFPLVIVSDALDYLSPKYLNKTLPDLARV-ASDGVLIFA 202 (271)
Q Consensus 157 fpLPYR~kSFslVivSDaLDyLspryLNkTLPeLaRv-sadglViF~ 202 (271)
.+|+ .+|++|+...+|.|+.|....+.|.++.|+ ...|++|++
T Consensus 134 -~~~~--~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~ 177 (261)
T 4gek_A 134 -DIAI--ENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLS 177 (261)
T ss_dssp -TCCC--CSEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred -cccc--cccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEE
Confidence 4565 469999999999999998877889999885 556777765
No 41
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=96.50 E-value=0.011 Score=48.00 Aligned_cols=138 Identities=14% Similarity=0.122 Sum_probs=85.1
Q ss_pred cccceeeecCCchhHhHhhhcccccccccccccc--ccchhHHHHHHH--hhceeeeeeecCCCCCCCCCccEEEecccc
Q 024173 100 SMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV--HKGIVRVADIKFPLPYRAKSFPLVIVSDAL 175 (271)
Q Consensus 100 sM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLv--rKGiVRvADIkfpLPYR~kSFslVivSDaL 175 (271)
.-.+||.||-.+......|++.-..+..||++.+ ++-+..+++..- .+=-+..+|+. .+|+...+|++|+..++|
T Consensus 82 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~~l 160 (297)
T 2o57_A 82 RQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFL-EIPCEDNSYDFIWSQDAF 160 (297)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTT-SCSSCTTCEEEEEEESCG
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcc-cCCCCCCCEeEEEecchh
Confidence 3458999999998888888776456788887653 222333332211 01124556763 578888999999999999
Q ss_pred cccChhhhcccccchhhcc-cCceEEEecC--CCc-hhhhHHh-hhhcCCccccccchhHHHHHHHhcccc
Q 024173 176 DYLSPKYLNKTLPDLARVA-SDGVLIFAGY--PGQ-QRAKVAE-LSKFGRPAKMRSSSWWIRYFVQTSLEE 241 (271)
Q Consensus 176 DyLspryLNkTLPeLaRvs-adglViF~G~--Pgq-qrakvae-lskfgrpaK~rsssWW~r~F~qt~LeE 241 (271)
.++.. ..+.|-++.|+- .+|.++++.. +.. ....... ...++.| .+.+..-|.+.+.++|++.
T Consensus 161 ~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~aGf~~ 228 (297)
T 2o57_A 161 LHSPD--KLKVFQECARVLKPRGVMAITDPMKEDGIDKSSIQPILDRIKLH-DMGSLGLYRSLAKECGLVT 228 (297)
T ss_dssp GGCSC--HHHHHHHHHHHEEEEEEEEEEEEEECTTCCGGGGHHHHHHHTCS-SCCCHHHHHHHHHHTTEEE
T ss_pred hhcCC--HHHHHHHHHHHcCCCeEEEEEEeccCCCCchHHHHHHHHHhcCC-CCCCHHHHHHHHHHCCCeE
Confidence 99976 578888898875 4677777641 110 0011111 1222222 3445666777777777653
No 42
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=96.50 E-value=0.0031 Score=48.96 Aligned_cols=98 Identities=16% Similarity=0.177 Sum_probs=66.5
Q ss_pred ccceeeecCCchhHhHhhhccccccccccccccccchhHHHHHHHhh--ceeeeeeecCCCCCCCCCccEEEeccccccc
Q 024173 101 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHK--GIVRVADIKFPLPYRAKSFPLVIVSDALDYL 178 (271)
Q Consensus 101 M~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvrK--GiVRvADIkfpLPYR~kSFslVivSDaLDyL 178 (271)
-.+||.||..+..+...|++....+..|||+.+ +.-..++..... --+..+|+.- +|+...+|++||.++.+.++
T Consensus 44 ~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~--~~~~~a~~~~~~~~~~~~~~d~~~-~~~~~~~fD~v~~~~~l~~~ 120 (243)
T 3bkw_A 44 GLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSE--KMLARARAAGPDTGITYERADLDK-LHLPQDSFDLAYSSLALHYV 120 (243)
T ss_dssp TCEEEEETCTTCHHHHHHHHTTCSEEEEEESCH--HHHHHHHHTSCSSSEEEEECCGGG-CCCCTTCEEEEEEESCGGGC
T ss_pred CCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCH--HHHHHHHHhcccCCceEEEcChhh-ccCCCCCceEEEEecccccc
Confidence 358999999999888888776544888887652 222223322221 1245566643 56668899999999999998
Q ss_pred Chhhhcccccchhhcc-cCceEEEec
Q 024173 179 SPKYLNKTLPDLARVA-SDGVLIFAG 203 (271)
Q Consensus 179 spryLNkTLPeLaRvs-adglViF~G 203 (271)
. .+.+.|-++.|+- .+|.++++-
T Consensus 121 ~--~~~~~l~~~~~~L~pgG~l~~~~ 144 (243)
T 3bkw_A 121 E--DVARLFRTVHQALSPGGHFVFST 144 (243)
T ss_dssp S--CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred c--hHHHHHHHHHHhcCcCcEEEEEe
Confidence 5 3557778888764 567777653
No 43
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=96.49 E-value=0.015 Score=48.13 Aligned_cols=147 Identities=14% Similarity=0.176 Sum_probs=89.1
Q ss_pred HHHHHhc---ccccceeeecCCchhHhHhhhccc-cccccccccccccchhHHHHHHH-hhce---e--eeeeecCCCCC
Q 024173 92 ILKKAYG---DSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLV-HKGI---V--RVADIKFPLPY 161 (271)
Q Consensus 92 ~LkkaYG---dsM~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEPydied~d~~CKsLv-rKGi---V--RvADIkfpLPY 161 (271)
-+-+.|. ..-.+||.||-.+......|++.- ..+..|++.- ++-..++..+ +.|+ | ...|+.- +|.
T Consensus 154 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~---~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~ 229 (335)
T 2r3s_A 154 LIAQLVNENKIEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA---SVLEVAKENARIQGVASRYHTIAGSAFE-VDY 229 (335)
T ss_dssp HHHHHHTC--CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH---HHHHHHHHHHHHHTCGGGEEEEESCTTT-SCC
T ss_pred HHHHhcccccCCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH---HHHHHHHHHHHhcCCCcceEEEeccccc-CCC
Confidence 3344454 445799999999998888887663 4567777654 2222333322 2232 3 3455532 233
Q ss_pred CCCCccEEEecccccccChhhhcccccchhhc-ccCceEEEec-CCCchh-----hhHHhhhh--cCCccccccchhHHH
Q 024173 162 RAKSFPLVIVSDALDYLSPKYLNKTLPDLARV-ASDGVLIFAG-YPGQQR-----AKVAELSK--FGRPAKMRSSSWWIR 232 (271)
Q Consensus 162 R~kSFslVivSDaLDyLspryLNkTLPeLaRv-sadglViF~G-~Pgqqr-----akvaelsk--fgrpaK~rsssWW~r 232 (271)
. +.|++|+.++.|.|+++....+.|-++.|+ ..+|.+++.- .+.+.. ...-++.- .....+.++..-|.+
T Consensus 230 ~-~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ 308 (335)
T 2r3s_A 230 G-NDYDLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITPPDAAAFSLVMLATTPNGDAYTFAEYES 308 (335)
T ss_dssp C-SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCSHHHHHHHHHHHHHSSSCCCCCHHHHHH
T ss_pred C-CCCcEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCchHHHHHHHHHHeeCCCCCcCCHHHHHH
Confidence 2 349999999999999988888888888886 4567555543 322211 11111111 111346778888888
Q ss_pred HHHHhccccch
Q 024173 233 YFVQTSLEENE 243 (271)
Q Consensus 233 ~F~qt~LeEnE 243 (271)
.+.++|++.-+
T Consensus 309 ll~~aGf~~~~ 319 (335)
T 2r3s_A 309 MFSNAGFSHSQ 319 (335)
T ss_dssp HHHHTTCSEEE
T ss_pred HHHHCCCCeee
Confidence 88888886543
No 44
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=96.47 E-value=0.015 Score=46.55 Aligned_cols=106 Identities=16% Similarity=0.180 Sum_probs=72.8
Q ss_pred HHhcccccceeeecCCchhHhHhhhccccccccccccccccchhHHHHHHHh-hc-----eeeeeeecCCCCC-CCCCcc
Q 024173 95 KAYGDSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVH-KG-----IVRVADIKFPLPY-RAKSFP 167 (271)
Q Consensus 95 kaYGdsM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvr-KG-----iVRvADIkfpLPY-R~kSFs 167 (271)
+.+-..=.+||.+|..+......|.+....+..|||+.+ +.-..++.... .| -+..+|+. .+|+ ...+|+
T Consensus 59 ~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~--~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~~~~~~~fD 135 (298)
T 1ri5_A 59 RLYTKRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAE--VSINDARVRARNMKRRFKVFFRAQDSY-GRHMDLGKEFD 135 (298)
T ss_dssp HHHCCTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCH--HHHHHHHHHHHTSCCSSEEEEEESCTT-TSCCCCSSCEE
T ss_pred HHhCCCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCH--HHHHHHHHHHHhcCCCccEEEEECCcc-ccccCCCCCcC
Confidence 344344568999999998887777776666889988653 12223333322 23 24456663 2355 578999
Q ss_pred EEEecccccc--cChhhhcccccchhhccc-CceEEEec
Q 024173 168 LVIVSDALDY--LSPKYLNKTLPDLARVAS-DGVLIFAG 203 (271)
Q Consensus 168 lVivSDaLDy--LspryLNkTLPeLaRvsa-dglViF~G 203 (271)
+||..+++.| .++..+.+.|-++.|+-. +|.+|++-
T Consensus 136 ~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 174 (298)
T 1ri5_A 136 VISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTV 174 (298)
T ss_dssp EEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 9999999998 678888889999998755 56666654
No 45
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=96.46 E-value=0.0043 Score=46.58 Aligned_cols=111 Identities=16% Similarity=0.223 Sum_probs=74.3
Q ss_pred HHHHhHhHHHHHHhcccccceeeecCCchhHhHhhhcccccccccccccc--ccchhHHHHHHHh-hceeeeeeecCCCC
Q 024173 84 SEIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVH-KGIVRVADIKFPLP 160 (271)
Q Consensus 84 ~eV~~AiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvr-KGiVRvADIkfpLP 160 (271)
.++.+.++..+ =.+||.+|..+-.....|.+. ..+..|||+.+ ++.+..+.+..-- .--+..+|+.- +|
T Consensus 22 ~~l~~~~~~~~------~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~-~~ 93 (199)
T 2xvm_A 22 SEVLEAVKVVK------PGKTLDLGCGNGRNSLYLAAN-GYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNN-LT 93 (199)
T ss_dssp HHHHHHTTTSC------SCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGG-CC
T ss_pred HHHHHHhhccC------CCeEEEEcCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhh-CC
Confidence 34555555431 248999999998887777766 56788887643 3333333322110 11245567643 55
Q ss_pred CCCCCccEEEecccccccChhhhcccccchhhcc-cCceEEEec
Q 024173 161 YRAKSFPLVIVSDALDYLSPKYLNKTLPDLARVA-SDGVLIFAG 203 (271)
Q Consensus 161 YR~kSFslVivSDaLDyLspryLNkTLPeLaRvs-adglViF~G 203 (271)
+ ..+|++||.++.+.|+++..+.+.|-++.|+- .+|.+++..
T Consensus 94 ~-~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 136 (199)
T 2xvm_A 94 F-DRQYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVA 136 (199)
T ss_dssp C-CCCEEEEEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred C-CCCceEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 6 88999999999999999988889999998875 467755544
No 46
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=96.44 E-value=0.0088 Score=44.26 Aligned_cols=100 Identities=12% Similarity=0.090 Sum_probs=66.6
Q ss_pred cccceeeecCCchhHhHhhhccc-ccccccccccc--ccchhHHHHHHHhh-ceeeeeeecCCCCCCCCCccEEEecccc
Q 024173 100 SMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYD--IEDADARCKSLVHK-GIVRVADIKFPLPYRAKSFPLVIVSDAL 175 (271)
Q Consensus 100 sM~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEPyd--ied~d~~CKsLvrK-GiVRvADIkfpLPYR~kSFslVivSDaL 175 (271)
.-.+||-+|..+......|.+.- ..+..|||+.+ ++-+..+++.+--. .++..+|..-++|.-..+|++|+.+..+
T Consensus 25 ~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~i~~~~~~ 104 (178)
T 3hm2_A 25 PHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRIAVQQGAPRAFDDVPDNPDVIFIGGGL 104 (178)
T ss_dssp TTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECCTTGGGGGCCSCCSEEEECC-T
T ss_pred CCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecchHhhhhccCCCCCEEEECCcc
Confidence 34589999999988887777663 67888998765 44444444433111 2344466655677655899999999988
Q ss_pred cccChhhhcccccchhh-cccCceEEEecCC
Q 024173 176 DYLSPKYLNKTLPDLAR-VASDGVLIFAGYP 205 (271)
Q Consensus 176 DyLspryLNkTLPeLaR-vsadglViF~G~P 205 (271)
.+ .+.+.++.| +..+|.+++....
T Consensus 105 ~~------~~~l~~~~~~L~~gG~l~~~~~~ 129 (178)
T 3hm2_A 105 TA------PGVFAAAWKRLPVGGRLVANAVT 129 (178)
T ss_dssp TC------TTHHHHHHHTCCTTCEEEEEECS
T ss_pred cH------HHHHHHHHHhcCCCCEEEEEeec
Confidence 77 344555655 4667888887743
No 47
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=96.39 E-value=0.075 Score=42.38 Aligned_cols=139 Identities=12% Similarity=0.046 Sum_probs=83.2
Q ss_pred ccceeeecCCchhHhHhhhccc--cccccccccccc--------cchhHHHHHHH--hhceeeeee-e-cCCCCCCCCCc
Q 024173 101 MHKVLHVGPDTCSVVSTLLKEE--ETEAWGVEPYDI--------EDADARCKSLV--HKGIVRVAD-I-KFPLPYRAKSF 166 (271)
Q Consensus 101 M~kVLHVGPdtC~VVs~LLkEe--~tEAWGVEPydi--------ed~d~~CKsLv--rKGiVRvAD-I-kfpLPYR~kSF 166 (271)
-.+||-||-.+-.....|.+.- ..+.-||++.+- +.+..+++..- .+=-+..+| + ...+|+...+|
T Consensus 44 ~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~f 123 (275)
T 3bkx_A 44 GEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLGPIADQHF 123 (275)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCGGGTTCCC
T ss_pred CCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhccCCCCCCCE
Confidence 3589999999998888888763 278999998763 33333333210 111234455 3 35678888999
Q ss_pred cEEEecccccccChhhhcccccchhhccc-CceEEEec--CCCch----hhhHHhhh-----hc-----CCccccccchh
Q 024173 167 PLVIVSDALDYLSPKYLNKTLPDLARVAS-DGVLIFAG--YPGQQ----RAKVAELS-----KF-----GRPAKMRSSSW 229 (271)
Q Consensus 167 slVivSDaLDyLspryLNkTLPeLaRvsa-dglViF~G--~Pgqq----rakvaels-----kf-----grpaK~rsssW 229 (271)
++|+..+.+.|+... ..-+-.+.++-. +|.++++- .|+.. ..-...+. .+ +....+.+..-
T Consensus 124 D~v~~~~~l~~~~~~--~~~~~~~~~l~~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 201 (275)
T 3bkx_A 124 DRVVLAHSLWYFASA--NALALLFKNMAAVCDHVDVAEWSMQPTALDQIGHLQAAMIQGLLYAIAPSDVANIRTLITPDT 201 (275)
T ss_dssp SEEEEESCGGGSSCH--HHHHHHHHHHTTTCSEEEEEEECSSCSSGGGHHHHHHHHHHHHHHHHSCCTTCSCCCCCCHHH
T ss_pred EEEEEccchhhCCCH--HHHHHHHHHHhCCCCEEEEEEecCCCCchhhhhHHHHHHHHHHHhhccccccccccccCCHHH
Confidence 999999999998643 223334455555 88888864 22211 11111111 11 11223556677
Q ss_pred HHHHHHHhcccc
Q 024173 230 WIRYFVQTSLEE 241 (271)
Q Consensus 230 W~r~F~qt~LeE 241 (271)
|.+.+.++|++.
T Consensus 202 l~~~l~~aGf~~ 213 (275)
T 3bkx_A 202 LAQIAHDNTWTY 213 (275)
T ss_dssp HHHHHHHHTCEE
T ss_pred HHHHHHHCCCee
Confidence 788888877754
No 48
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=96.36 E-value=0.023 Score=47.37 Aligned_cols=149 Identities=11% Similarity=0.137 Sum_probs=91.7
Q ss_pred hHHHHHHhc-ccccceeeecCCchhHhHhhhccc-cccccccccc-cccchhHHHHHHHhhc--eeeeeeecCCCCCCCC
Q 024173 90 IPILKKAYG-DSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPY-DIEDADARCKSLVHKG--IVRVADIKFPLPYRAK 164 (271)
Q Consensus 90 iP~LkkaYG-dsM~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEPy-died~d~~CKsLvrKG--iVRvADIkfpLPYR~k 164 (271)
++.+-+.|+ .. .+||.||..+......|++.- ..+..|++.- -++.+..+++..--.. -+...|+--|+| +
T Consensus 157 ~~~~~~~~~~~~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~---~ 232 (334)
T 2ip2_A 157 FHEIPRLLDFRG-RSFVDVGGGSGELTKAILQAEPSARGVMLDREGSLGVARDNLSSLLAGERVSLVGGDMLQEVP---S 232 (334)
T ss_dssp HHHHHHHSCCTT-CEEEEETCTTCHHHHHHHHHCTTCEEEEEECTTCTHHHHHHTHHHHHTTSEEEEESCTTTCCC---S
T ss_pred HHHHHHhCCCCC-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCcHHHHHHHHHHHhhcCCCCcEEEecCCCCCCCC---C
Confidence 344555553 22 799999999999888888653 4567777651 1223333333221111 234456644655 6
Q ss_pred CccEEEecccccccChhhhcccccchhhc-ccCceEEEec--CCC--ch-hhhHHhhhhcC-CccccccchhHHHHHHHh
Q 024173 165 SFPLVIVSDALDYLSPKYLNKTLPDLARV-ASDGVLIFAG--YPG--QQ-RAKVAELSKFG-RPAKMRSSSWWIRYFVQT 237 (271)
Q Consensus 165 SFslVivSDaLDyLspryLNkTLPeLaRv-sadglViF~G--~Pg--qq-rakvaelskfg-rpaK~rsssWW~r~F~qt 237 (271)
+|++|+.++.|.+.++....+.|-++.|+ ..+|.+++.- .|. +. ....-++.-.. -..+.|+..-|.+.+.++
T Consensus 233 ~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~a 312 (334)
T 2ip2_A 233 NGDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERTISASEPSPMSVLWDVHLFMACAGRHRTTEEVVDLLGRG 312 (334)
T ss_dssp SCSEEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSSCCHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHT
T ss_pred CCCEEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhHHhhhHhHhhCCCcCCCHHHHHHHHHHC
Confidence 89999999999999988877888888876 4577777663 222 11 11111221110 014567888899999999
Q ss_pred ccccc
Q 024173 238 SLEEN 242 (271)
Q Consensus 238 ~LeEn 242 (271)
|++.-
T Consensus 313 Gf~~~ 317 (334)
T 2ip2_A 313 GFAVE 317 (334)
T ss_dssp TEEEE
T ss_pred CCcee
Confidence 88753
No 49
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=96.34 E-value=0.0068 Score=48.70 Aligned_cols=133 Identities=11% Similarity=0.161 Sum_probs=83.3
Q ss_pred ccceeeecCCchhHhHhhhcccccccccccccc--ccchhHHHHHHH--hhceeeeeeecCCCCCCCCCccEEEeccccc
Q 024173 101 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV--HKGIVRVADIKFPLPYRAKSFPLVIVSDALD 176 (271)
Q Consensus 101 M~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLv--rKGiVRvADIkfpLPYR~kSFslVivSDaLD 176 (271)
-.+||-||..+......|.+....+..|||+.+ ++-+..+++..- .+=-+..+|+ ..+|+...+|++|+...++.
T Consensus 47 ~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~i~~~~~~~ 125 (267)
T 3kkz_A 47 KSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSM-DDLPFRNEELDLIWSEGAIY 125 (267)
T ss_dssp TCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT-TSCCCCTTCEEEEEESSCGG
T ss_pred CCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcCh-hhCCCCCCCEEEEEEcCCce
Confidence 358999999999999888888677899998754 233333333221 1123566787 46777789999999999999
Q ss_pred ccChhhhcccccchhhcc-cCceEEEecC---CCchhhhHHhh--hhcCCccccccchhHHHHHHHhccc
Q 024173 177 YLSPKYLNKTLPDLARVA-SDGVLIFAGY---PGQQRAKVAEL--SKFGRPAKMRSSSWWIRYFVQTSLE 240 (271)
Q Consensus 177 yLspryLNkTLPeLaRvs-adglViF~G~---Pgqqrakvael--skfgrpaK~rsssWW~r~F~qt~Le 240 (271)
++.| .+.|-++.|+- .+|.++++.. +........+. ..+. .+.+...|.+.+.++|++
T Consensus 126 ~~~~---~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~aGf~ 189 (267)
T 3kkz_A 126 NIGF---ERGLNEWRKYLKKGGYLAVSECSWFTDERPAEINDFWMDAYP---EIDTIPNQVAKIHKAGYL 189 (267)
T ss_dssp GTCH---HHHHHHHGGGEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCT---TCEEHHHHHHHHHHTTEE
T ss_pred ecCH---HHHHHHHHHHcCCCCEEEEEEeeecCCCChHHHHHHHHHhCC---CCCCHHHHHHHHHHCCCE
Confidence 9954 45677777754 4667766541 11111111111 1111 345556666666666655
No 50
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=96.33 E-value=0.049 Score=42.57 Aligned_cols=140 Identities=17% Similarity=0.212 Sum_probs=85.5
Q ss_pred HhHHHHHHhcccccceeeecCCchhHhHhhhccccccccccccccccchhHHHHHHHhhceeeeeeecCCCCCCCCCccE
Q 024173 89 AIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPL 168 (271)
Q Consensus 89 AiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvrKGiVRvADIkfpLPYR~kSFsl 168 (271)
.+..|++.-. -.+||.||..+-.....|.+. .|||+.+ +.-..|+.. .--+..+|+. .+|+...+|++
T Consensus 38 ~~~~l~~~~~--~~~vLDiG~G~G~~~~~l~~~-----~~vD~s~--~~~~~a~~~--~~~~~~~d~~-~~~~~~~~fD~ 105 (219)
T 1vlm_A 38 ELQAVKCLLP--EGRGVEIGVGTGRFAVPLKIK-----IGVEPSE--RMAEIARKR--GVFVLKGTAE-NLPLKDESFDF 105 (219)
T ss_dssp HHHHHHHHCC--SSCEEEETCTTSTTHHHHTCC-----EEEESCH--HHHHHHHHT--TCEEEECBTT-BCCSCTTCEEE
T ss_pred HHHHHHHhCC--CCcEEEeCCCCCHHHHHHHHH-----hccCCCH--HHHHHHHhc--CCEEEEcccc-cCCCCCCCeeE
Confidence 3444544433 458999999998888777765 7776543 111222222 2234556663 46777889999
Q ss_pred EEecccccccChhhhcccccchhhcc-cCceEEEecCCCc-hhhhHH-hh---hhcCCccccccchhHHHHHHHhccccc
Q 024173 169 VIVSDALDYLSPKYLNKTLPDLARVA-SDGVLIFAGYPGQ-QRAKVA-EL---SKFGRPAKMRSSSWWIRYFVQTSLEEN 242 (271)
Q Consensus 169 VivSDaLDyLspryLNkTLPeLaRvs-adglViF~G~Pgq-qrakva-el---skfgrpaK~rsssWW~r~F~qt~LeEn 242 (271)
|+..+.|.|+.. ..+.|-++.|+- .+|.++++..+.. ...... .+ ..+.......+..-|.+.+.++|++.-
T Consensus 106 v~~~~~l~~~~~--~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~ 183 (219)
T 1vlm_A 106 ALMVTTICFVDD--PERALKEAYRILKKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEF 183 (219)
T ss_dssp EEEESCGGGSSC--HHHHHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEE
T ss_pred EEEcchHhhccC--HHHHHHHHHHHcCCCcEEEEEEeCCccHHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEE
Confidence 999999999842 356777787764 4567777653322 111111 11 122233455677888899999888653
No 51
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=96.33 E-value=0.0096 Score=46.90 Aligned_cols=97 Identities=12% Similarity=0.148 Sum_probs=64.7
Q ss_pred cceeeecCCchhHhHhhhcccccccccccccc--ccchhHHHHHHH--hhceeeeeeecCCCCCCCCCccEEEecccccc
Q 024173 102 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV--HKGIVRVADIKFPLPYRAKSFPLVIVSDALDY 177 (271)
Q Consensus 102 ~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLv--rKGiVRvADIkfpLPYR~kSFslVivSDaLDy 177 (271)
.+||-||-.+-.....|.+.-..+.-|||+.+ ++.+..+.+..- .+=-+..+|+. .+|+ ..+|++|+..+++.+
T Consensus 38 ~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~-~~~~-~~~fD~V~~~~~~~~ 115 (256)
T 1nkv_A 38 TRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAA-GYVA-NEKCDVAACVGATWI 115 (256)
T ss_dssp CEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCT-TCCC-SSCEEEEEEESCGGG
T ss_pred CEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChH-hCCc-CCCCCEEEECCChHh
Confidence 48999999998877777765556778887653 333333332210 01224567774 3566 889999999999998
Q ss_pred cChhhhcccccchhhccc-CceEEEe
Q 024173 178 LSPKYLNKTLPDLARVAS-DGVLIFA 202 (271)
Q Consensus 178 LspryLNkTLPeLaRvsa-dglViF~ 202 (271)
+.. ..+.|-++.|+-. +|.++++
T Consensus 116 ~~~--~~~~l~~~~r~LkpgG~l~~~ 139 (256)
T 1nkv_A 116 AGG--FAGAEELLAQSLKPGGIMLIG 139 (256)
T ss_dssp TSS--SHHHHHHHTTSEEEEEEEEEE
T ss_pred cCC--HHHHHHHHHHHcCCCeEEEEe
Confidence 852 4566788888755 5666664
No 52
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=96.31 E-value=0.0078 Score=49.46 Aligned_cols=104 Identities=13% Similarity=0.119 Sum_probs=72.1
Q ss_pred HHhcccccceeeecCCchhHhHhhhccccccccccccccccchhHHHHHHHh-hc-------eeeeeeecCCCCCCCCCc
Q 024173 95 KAYGDSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVH-KG-------IVRVADIKFPLPYRAKSF 166 (271)
Q Consensus 95 kaYGdsM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvr-KG-------iVRvADIkfpLPYR~kSF 166 (271)
+..+..-.+||-||-.+......|.+. ..+..|||+.+ +.-..++.... .| -+..+|+.- +|+ ..+|
T Consensus 77 ~~~~~~~~~vLDlGcG~G~~~~~l~~~-~~~v~gvD~s~--~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~-~~~-~~~f 151 (299)
T 3g2m_A 77 TRTGPVSGPVLELAAGMGRLTFPFLDL-GWEVTALELST--SVLAAFRKRLAEAPADVRDRCTLVQGDMSA-FAL-DKRF 151 (299)
T ss_dssp HHHCCCCSCEEEETCTTTTTHHHHHTT-TCCEEEEESCH--HHHHHHHHHHHTSCHHHHTTEEEEECBTTB-CCC-SCCE
T ss_pred HhhCCCCCcEEEEeccCCHHHHHHHHc-CCeEEEEECCH--HHHHHHHHHHhhcccccccceEEEeCchhc-CCc-CCCc
Confidence 333443349999999999988888876 56788887653 22223333222 22 266778753 555 7899
Q ss_pred cEEEec-ccccccChhhhcccccchhhccc-CceEEEec
Q 024173 167 PLVIVS-DALDYLSPKYLNKTLPDLARVAS-DGVLIFAG 203 (271)
Q Consensus 167 slVivS-DaLDyLspryLNkTLPeLaRvsa-dglViF~G 203 (271)
++||.+ +++.|++|..+.+.|-++.|+-. +|.++++-
T Consensus 152 D~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 190 (299)
T 3g2m_A 152 GTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSL 190 (299)
T ss_dssp EEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEe
Confidence 999965 88999999889999999999765 56665543
No 53
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=96.30 E-value=0.011 Score=45.72 Aligned_cols=107 Identities=16% Similarity=0.223 Sum_probs=74.3
Q ss_pred ccceeeecCCchhHhHhhhccccccccccccccccchhHHHHHHHhhceeeeeeecCCCCCCCCCccEEEecccccccCh
Q 024173 101 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYLSP 180 (271)
Q Consensus 101 M~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvrKGiVRvADIkfpLPYR~kSFslVivSDaLDyLsp 180 (271)
-.+||.||..+..+...| ..+..||++.+- .--+..+|+.- +|+...+|++|+.+++|.+
T Consensus 68 ~~~vLDiG~G~G~~~~~l----~~~v~~~D~s~~------------~~~~~~~d~~~-~~~~~~~fD~v~~~~~l~~--- 127 (215)
T 2zfu_A 68 SLVVADFGCGDCRLASSI----RNPVHCFDLASL------------DPRVTVCDMAQ-VPLEDESVDVAVFCLSLMG--- 127 (215)
T ss_dssp TSCEEEETCTTCHHHHHC----CSCEEEEESSCS------------STTEEESCTTS-CSCCTTCEEEEEEESCCCS---
T ss_pred CCeEEEECCcCCHHHHHh----hccEEEEeCCCC------------CceEEEecccc-CCCCCCCEeEEEEehhccc---
Confidence 358999999998876665 256778877654 12345667643 6777889999999999964
Q ss_pred hhhcccccchhhcc-cCceEEEecCCCchhhhHHhhhhcCCccccccchhHHHHHHHhccccch
Q 024173 181 KYLNKTLPDLARVA-SDGVLIFAGYPGQQRAKVAELSKFGRPAKMRSSSWWIRYFVQTSLEENE 243 (271)
Q Consensus 181 ryLNkTLPeLaRvs-adglViF~G~PgqqrakvaelskfgrpaK~rsssWW~r~F~qt~LeEnE 243 (271)
..+.+.|-++.|+- .+|.++++-.... ..+...|.+.+.++|++.-+
T Consensus 128 ~~~~~~l~~~~~~L~~gG~l~i~~~~~~----------------~~~~~~~~~~l~~~Gf~~~~ 175 (215)
T 2zfu_A 128 TNIRDFLEEANRVLKPGGLLKVAEVSSR----------------FEDVRTFLRAVTKLGFKIVS 175 (215)
T ss_dssp SCHHHHHHHHHHHEEEEEEEEEEECGGG----------------CSCHHHHHHHHHHTTEEEEE
T ss_pred cCHHHHHHHHHHhCCCCeEEEEEEcCCC----------------CCCHHHHHHHHHHCCCEEEE
Confidence 34466777888764 5677777653321 12677888888888886543
No 54
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=96.28 E-value=0.0074 Score=51.01 Aligned_cols=144 Identities=20% Similarity=0.209 Sum_probs=88.8
Q ss_pred HHHHHHhc-ccccceeeecCCchhHhHhhhccc-ccccccccc-ccccchhHHHHHHHhhce-----eeeeeecCCCCCC
Q 024173 91 PILKKAYG-DSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEP-YDIEDADARCKSLVHKGI-----VRVADIKFPLPYR 162 (271)
Q Consensus 91 P~LkkaYG-dsM~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEP-ydied~d~~CKsLvrKGi-----VRvADIkfpLPYR 162 (271)
+.+-+.|. ..-.+||.||-.+......|++.- +.+..|++. --++.+..+++ +.|+ +...|+--++|.
T Consensus 172 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~---~~~~~~~v~~~~~d~~~~~~~- 247 (374)
T 1qzz_A 172 EAPADAYDWSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVELAGPAERARRRFA---DAGLADRVTVAEGDFFKPLPV- 247 (374)
T ss_dssp HHHHHTSCCTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHH---HTTCTTTEEEEECCTTSCCSC-
T ss_pred HHHHHhCCCCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeCHHHHHHHHHHHH---hcCCCCceEEEeCCCCCcCCC-
Confidence 34444443 234689999999999888888764 456777763 22333333332 2232 345666446764
Q ss_pred CCCccEEEecccccccChhhhcccccchhhc-ccCceEEEecC----CCchh---hhHHhh---hhcCCccccccchhHH
Q 024173 163 AKSFPLVIVSDALDYLSPKYLNKTLPDLARV-ASDGVLIFAGY----PGQQR---AKVAEL---SKFGRPAKMRSSSWWI 231 (271)
Q Consensus 163 ~kSFslVivSDaLDyLspryLNkTLPeLaRv-sadglViF~G~----Pgqqr---akvael---skfgrpaK~rsssWW~ 231 (271)
.|++|+.++.|.+++.....+.|-++.|+ ..+|.+++.-. |.... ...-++ ..+| .+.++..-|.
T Consensus 248 --~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 323 (374)
T 1qzz_A 248 --TADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDRADVEGDGADRFFSTLLDLRMLTFMG--GRVRTRDEVV 323 (374)
T ss_dssp --CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCH-------HHHHHHHHHHHHHHHS--CCCCCHHHHH
T ss_pred --CCCEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEechhhcCCCCCcchhhhcchHHHHhCC--CcCCCHHHHH
Confidence 49999999999999887666778888876 45676665433 43221 111111 1122 3567888899
Q ss_pred HHHHHhccccc
Q 024173 232 RYFVQTSLEEN 242 (271)
Q Consensus 232 r~F~qt~LeEn 242 (271)
+.+.++|++.-
T Consensus 324 ~ll~~aGf~~~ 334 (374)
T 1qzz_A 324 DLAGSAGLALA 334 (374)
T ss_dssp HHHHTTTEEEE
T ss_pred HHHHHCCCceE
Confidence 99999888643
No 55
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=96.26 E-value=0.0071 Score=46.47 Aligned_cols=114 Identities=25% Similarity=0.267 Sum_probs=74.8
Q ss_pred HhHhHHHHHHhcccccceeeecCCchhHhHhhhcccccccccccccc--ccchhHHHHHHHhhceeeeeeecCCCCCCCC
Q 024173 87 QRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRAK 164 (271)
Q Consensus 87 ~~AiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvrKGiVRvADIkfpLPYR~k 164 (271)
+..++.+.+.... -.+||.+|..+-.....|.+.. .+..|||+.+ ++.+..+++..-.+--+..+|+. .+|+...
T Consensus 26 ~~~~~~l~~~~~~-~~~vLDlG~G~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~-~~~~~~~ 102 (227)
T 1ve3_A 26 ETLEPLLMKYMKK-RGKVLDLACGVGGFSFLLEDYG-FEVVGVDISEDMIRKAREYAKSRESNVEFIVGDAR-KLSFEDK 102 (227)
T ss_dssp HHHHHHHHHSCCS-CCEEEEETCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTT-SCCSCTT
T ss_pred HHHHHHHHHhcCC-CCeEEEEeccCCHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHhcCCCceEEECchh-cCCCCCC
Confidence 3444555554444 4589999999987776666554 4888887642 23333333322112235566764 3566678
Q ss_pred CccEEEecccccccChhhhcccccchhhccc-CceEEEec
Q 024173 165 SFPLVIVSDALDYLSPKYLNKTLPDLARVAS-DGVLIFAG 203 (271)
Q Consensus 165 SFslVivSDaLDyLspryLNkTLPeLaRvsa-dglViF~G 203 (271)
+|++||..+.+.+..+.-+.+.|.++.|+-. +|.+++.-
T Consensus 103 ~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 142 (227)
T 1ve3_A 103 TFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYF 142 (227)
T ss_dssp CEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cEEEEEEcCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEe
Confidence 9999999999888887777788888888654 56666653
No 56
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=96.25 E-value=0.0063 Score=46.90 Aligned_cols=111 Identities=17% Similarity=0.252 Sum_probs=74.1
Q ss_pred hHhHHHHHHhc-ccccceeeecCCchhHhHhhhccccccccccccccccchhHHHHHHHhh-c--eeeeeeecCCCCCCC
Q 024173 88 RAIPILKKAYG-DSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHK-G--IVRVADIKFPLPYRA 163 (271)
Q Consensus 88 ~AiP~LkkaYG-dsM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvrK-G--iVRvADIkfpLPYR~ 163 (271)
+...++..... ..-.+||-+|..+-.....|.+.. .+..|||+.+ ++-..++....+ + -+..+|+.-.. -.
T Consensus 38 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~~vD~s~--~~~~~a~~~~~~~~~~~~~~~d~~~~~--~~ 112 (216)
T 3ofk_A 38 RHTQLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPHC-KRLTVIDVMP--RAIGRACQRTKRWSHISWAATDILQFS--TA 112 (216)
T ss_dssp HHHHHHHHHTTTSSEEEEEEECCTTSHHHHHHGGGE-EEEEEEESCH--HHHHHHHHHTTTCSSEEEEECCTTTCC--CS
T ss_pred HHHHHHHHHcccCCCCcEEEEcCCCCHHHHHHHHcC-CEEEEEECCH--HHHHHHHHhcccCCCeEEEEcchhhCC--CC
Confidence 33444444433 234689999999998887777654 6888888753 222333333322 1 34567765433 36
Q ss_pred CCccEEEecccccccC-hhhhcccccchhhcccC-ceEEEec
Q 024173 164 KSFPLVIVSDALDYLS-PKYLNKTLPDLARVASD-GVLIFAG 203 (271)
Q Consensus 164 kSFslVivSDaLDyLs-pryLNkTLPeLaRvsad-glViF~G 203 (271)
.+|++|+.++.+.|+. |..+.+.|.++.|+-.. |+++|+-
T Consensus 113 ~~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 154 (216)
T 3ofk_A 113 ELFDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGS 154 (216)
T ss_dssp CCEEEEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCccEEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 8999999999999998 67888889999987655 5555543
No 57
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=96.20 E-value=0.017 Score=48.77 Aligned_cols=147 Identities=18% Similarity=0.172 Sum_probs=92.1
Q ss_pred HHHHHHhc-ccccceeeecCCchhHhHhhhccc-cccccccc-cccccchhHHHHHHH-h-hceeeeeeecCCCCCCCCC
Q 024173 91 PILKKAYG-DSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVE-PYDIEDADARCKSLV-H-KGIVRVADIKFPLPYRAKS 165 (271)
Q Consensus 91 P~LkkaYG-dsM~kVLHVGPdtC~VVs~LLkEe-~tEAWGVE-Pydied~d~~CKsLv-r-KGiVRvADIkfpLPYR~kS 165 (271)
+.+-+.|. ..-.+||.||-.+-.....|++.. +.+..|++ |--++.+..+++..- . +=-+...|+.-++|- .
T Consensus 173 ~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~---~ 249 (360)
T 1tw3_A 173 DAPAAAYDWTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEMAGTVDTARSYLKDEGLSDRVDVVEGDFFEPLPR---K 249 (360)
T ss_dssp HHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECTTHHHHHHHHHHHTTCTTTEEEEECCTTSCCSS---C
T ss_pred HHHHHhCCCccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecCHHHHHHHHHHHHhcCCCCceEEEeCCCCCCCCC---C
Confidence 34444554 234689999999998888888764 45677776 433444444433221 0 112445676546663 4
Q ss_pred ccEEEecccccccChhhhcccccchhhc-ccCceEEEecC---CCch---hhhHHhh---hhcCCccccccchhHHHHHH
Q 024173 166 FPLVIVSDALDYLSPKYLNKTLPDLARV-ASDGVLIFAGY---PGQQ---RAKVAEL---SKFGRPAKMRSSSWWIRYFV 235 (271)
Q Consensus 166 FslVivSDaLDyLspryLNkTLPeLaRv-sadglViF~G~---Pgqq---rakvael---skfgrpaK~rsssWW~r~F~ 235 (271)
|++|+.++.|.++++....+.|-++.|+ ..+|.+++.-. |... -....++ ..+| .+.++...|.+.|.
T Consensus 250 ~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~t~~e~~~ll~ 327 (360)
T 1tw3_A 250 ADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERDDLHENSFNEQFTELDLRMLVFLG--GALRTREKWDGLAA 327 (360)
T ss_dssp EEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCSHHHHHHHHHHHHHHS--CCCCBHHHHHHHHH
T ss_pred ccEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCcchhhhccHHHhhhcC--CcCCCHHHHHHHHH
Confidence 9999999999999887777788888886 45676666542 3221 1111222 1223 36688888999998
Q ss_pred Hhccccc
Q 024173 236 QTSLEEN 242 (271)
Q Consensus 236 qt~LeEn 242 (271)
++|++.-
T Consensus 328 ~aGf~~~ 334 (360)
T 1tw3_A 328 SAGLVVE 334 (360)
T ss_dssp HTTEEEE
T ss_pred HCCCeEE
Confidence 8888643
No 58
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=96.08 E-value=0.023 Score=47.76 Aligned_cols=140 Identities=11% Similarity=0.206 Sum_probs=91.4
Q ss_pred ccceeeecCCchhHhHhhhccc-cccccccccccccchhHHHHHHHh-hce---e--eeeeecCCCCCCCCCccEEEecc
Q 024173 101 MHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLVH-KGI---V--RVADIKFPLPYRAKSFPLVIVSD 173 (271)
Q Consensus 101 M~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEPydied~d~~CKsLvr-KGi---V--RvADIkfpLPYR~kSFslVivSD 173 (271)
-.+||-||-.+-.....|++.- ..+..|++. .+.-..++..+. .|+ | ...|+.-+.++-+++|++|+.++
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~---~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~ 256 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL---PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAADVVMLND 256 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC---GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCCEEEEEEES
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC---HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCCccEEEEec
Confidence 5799999999999888888753 456667644 344344443332 232 3 34555433322457799999999
Q ss_pred cccccChhhhcccccchhhc-ccCceEEEec--CCCch----hhhHHhhhhc--CCccccccchhHHHHHHHhccccch
Q 024173 174 ALDYLSPKYLNKTLPDLARV-ASDGVLIFAG--YPGQQ----RAKVAELSKF--GRPAKMRSSSWWIRYFVQTSLEENE 243 (271)
Q Consensus 174 aLDyLspryLNkTLPeLaRv-sadglViF~G--~Pgqq----rakvaelskf--grpaK~rsssWW~r~F~qt~LeEnE 243 (271)
.|.++++....+.|-++.|+ ..+|.+++.- .|.+. -+...++.-+ -.-.+.|+...|.+.|.++|++.-+
T Consensus 257 vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~ 335 (352)
T 3mcz_A 257 CLHYFDAREAREVIGHAAGLVKPGGALLILTMTMNDDRVTPALSADFSLHMMVNTNHGELHPTPWIAGVVRDAGLAVGE 335 (352)
T ss_dssp CGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTTCCCCCHHHHHHHHHHTTCEEEE
T ss_pred ccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCCCCcCCHHHHHHHHHHCCCceee
Confidence 99999998888899988886 4567666643 22221 1122222221 1124578999999999999998665
No 59
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=96.07 E-value=0.0094 Score=44.28 Aligned_cols=94 Identities=12% Similarity=0.125 Sum_probs=66.9
Q ss_pred ccceeeecCCchhHhHhhhccccccccccccccccchhHHHHHHHhhceeeeeeecCCCCCCCCCccEEEecccccccCh
Q 024173 101 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYLSP 180 (271)
Q Consensus 101 M~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvrKGiVRvADIkfpLPYR~kSFslVivSDaLDyLsp 180 (271)
-.+||.+|..+......|.+... +..|||+.+ +.-..++....+=-+..+| +|+...+|++|+.++.+.++.
T Consensus 18 ~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~--~~~~~a~~~~~~v~~~~~d----~~~~~~~~D~v~~~~~l~~~~- 89 (170)
T 3i9f_A 18 KGVIVDYGCGNGFYCKYLLEFAT-KLYCIDINV--IALKEVKEKFDSVITLSDP----KEIPDNSVDFILFANSFHDMD- 89 (170)
T ss_dssp CEEEEEETCTTCTTHHHHHTTEE-EEEEECSCH--HHHHHHHHHCTTSEEESSG----GGSCTTCEEEEEEESCSTTCS-
T ss_pred CCeEEEECCCCCHHHHHHHhhcC-eEEEEeCCH--HHHHHHHHhCCCcEEEeCC----CCCCCCceEEEEEccchhccc-
Confidence 35899999999998888887765 888888753 2333333332233344455 777788999999999999994
Q ss_pred hhhcccccchhhcc-cCceEEEec
Q 024173 181 KYLNKTLPDLARVA-SDGVLIFAG 203 (271)
Q Consensus 181 ryLNkTLPeLaRvs-adglViF~G 203 (271)
-..+.|-++.|+- .+|.++++.
T Consensus 90 -~~~~~l~~~~~~L~pgG~l~~~~ 112 (170)
T 3i9f_A 90 -DKQHVISEVKRILKDDGRVIIID 112 (170)
T ss_dssp -CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred -CHHHHHHHHHHhcCCCCEEEEEE
Confidence 3456777887764 567777775
No 60
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=96.01 E-value=0.014 Score=47.70 Aligned_cols=136 Identities=13% Similarity=0.139 Sum_probs=86.6
Q ss_pred ccceeeecCCchhHhHhhhcc-cccccccccccc--ccchhHHHHH-------------H-Hhhc---------------
Q 024173 101 MHKVLHVGPDTCSVVSTLLKE-EETEAWGVEPYD--IEDADARCKS-------------L-VHKG--------------- 148 (271)
Q Consensus 101 M~kVLHVGPdtC~VVs~LLkE-e~tEAWGVEPyd--ied~d~~CKs-------------L-vrKG--------------- 148 (271)
-.+||-||-.|-. .+.|+.. ...+..||++.+ ++-+..+++. + ...|
T Consensus 72 ~~~vLDiGcG~G~-~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 150 (289)
T 2g72_A 72 GRTLIDIGSGPTV-YQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRAR 150 (289)
T ss_dssp CSEEEEETCTTCC-GGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHHH
T ss_pred CCeEEEECCCcCh-HHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHhh
Confidence 3589999999877 5555543 355788888753 2222222210 0 0122
Q ss_pred --eeeeeeecCCCCC-----CCCCccEEEecccccccChh--hhcccccchhhcc-cCceEEEecCCCchhhhHHhhhhc
Q 024173 149 --IVRVADIKFPLPY-----RAKSFPLVIVSDALDYLSPK--YLNKTLPDLARVA-SDGVLIFAGYPGQQRAKVAELSKF 218 (271)
Q Consensus 149 --iVRvADIkfpLPY-----R~kSFslVivSDaLDyLspr--yLNkTLPeLaRvs-adglViF~G~Pgqqrakvaelskf 218 (271)
-+..+|+.-++|+ ...+|++|+.+.+|.++.+. .+.+.|.++.|+= .+|.++|++.-...- ...
T Consensus 151 ~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~~------~~~ 224 (289)
T 2g72_A 151 VKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESW------YLA 224 (289)
T ss_dssp EEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEESCCE------EEE
T ss_pred hceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecCcce------EEc
Confidence 1344588766664 34679999999999998876 6888999999975 567888876221110 011
Q ss_pred CC---ccccccchhHHHHHHHhccccch
Q 024173 219 GR---PAKMRSSSWWIRYFVQTSLEENE 243 (271)
Q Consensus 219 gr---paK~rsssWW~r~F~qt~LeEnE 243 (271)
|. +....+...|.+.|.++|++.-+
T Consensus 225 ~~~~~~~~~~~~~~l~~~l~~aGf~~~~ 252 (289)
T 2g72_A 225 GEARLTVVPVSEEEVREALVRSGYKVRD 252 (289)
T ss_dssp TTEEEECCCCCHHHHHHHHHHTTEEEEE
T ss_pred CCeeeeeccCCHHHHHHHHHHcCCeEEE
Confidence 11 23455778899999999986543
No 61
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=96.01 E-value=0.0042 Score=47.00 Aligned_cols=102 Identities=18% Similarity=0.231 Sum_probs=68.8
Q ss_pred cccceeeecCCchhHhHhhhcccccccccccccc--ccchhHHHHHHHhhceeeeeeecCCCCCCCCCccEEEecccccc
Q 024173 100 SMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDY 177 (271)
Q Consensus 100 sM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvrKGiVRvADIkfpLPYR~kSFslVivSDaLDy 177 (271)
.-.+||.+|..+..+...|++....+..|+|+.+ ++-+..+++.. ..--+..+|+.- +|+...+|++||....+++
T Consensus 42 ~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~-~~i~~~~~d~~~-~~~~~~~fD~v~~~~~~~~ 119 (215)
T 2pxx_A 42 PEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAHV-PQLRWETMDVRK-LDFPSASFDVVLEKGTLDA 119 (215)
T ss_dssp TTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTTC-TTCEEEECCTTS-CCSCSSCEEEEEEESHHHH
T ss_pred CCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhcccC-CCcEEEEcchhc-CCCCCCcccEEEECcchhh
Confidence 3468999999998888888877555788887542 22233332211 123456677643 4777889999999999998
Q ss_pred cC-------------hhhhcccccchhhcc-cCceEEEec
Q 024173 178 LS-------------PKYLNKTLPDLARVA-SDGVLIFAG 203 (271)
Q Consensus 178 Ls-------------pryLNkTLPeLaRvs-adglViF~G 203 (271)
+. .....+.|-++.|+- .+|.+|+..
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 159 (215)
T 2pxx_A 120 LLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMT 159 (215)
T ss_dssp HTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEe
Confidence 86 445567777777765 456666655
No 62
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=96.01 E-value=0.047 Score=41.84 Aligned_cols=128 Identities=20% Similarity=0.215 Sum_probs=78.0
Q ss_pred cccceeeecCCchhHhHhhhccccccccccccccccchhHHHHHHHhhceeeeeeecCCCCCCCCCccEEEecccccccC
Q 024173 100 SMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYLS 179 (271)
Q Consensus 100 sM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvrKGiVRvADIkfpLPYR~kSFslVivSDaLDyLs 179 (271)
.-.+||.||..+......| ...+..|||+.+ +.-..++.....--+..+|+. .+|+...+|++|+.++.++|+.
T Consensus 36 ~~~~vLdiG~G~G~~~~~l---~~~~v~~vD~s~--~~~~~a~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~~l~~~~ 109 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL---PYPQKVGVEPSE--AMLAVGRRRAPEATWVRAWGE-ALPFPGESFDVVLLFTTLEFVE 109 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC---CCSEEEEECCCH--HHHHHHHHHCTTSEEECCCTT-SCCSCSSCEEEEEEESCTTTCS
T ss_pred CCCeEEEECCCCCHhHHhC---CCCeEEEEeCCH--HHHHHHHHhCCCcEEEEcccc-cCCCCCCcEEEEEEcChhhhcC
Confidence 4568999999998877666 223778887653 122223322222344566764 4788888999999999999996
Q ss_pred hhhhcccccchhhccc-CceEEEecCCCc-h-hhhHHhhhhcCCc----cccccchhHHHHHH
Q 024173 180 PKYLNKTLPDLARVAS-DGVLIFAGYPGQ-Q-RAKVAELSKFGRP----AKMRSSSWWIRYFV 235 (271)
Q Consensus 180 pryLNkTLPeLaRvsa-dglViF~G~Pgq-q-rakvaelskfgrp----aK~rsssWW~r~F~ 235 (271)
...+.|-++.|+-. +|.++++..+.. . .....++.+.|.+ ...-+..-|.+.|.
T Consensus 110 --~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~l~ 170 (211)
T 2gs9_A 110 --DVERVLLEARRVLRPGGALVVGVLEALSPWAALYRRLGEKGVLPWAQARFLAREDLKALLG 170 (211)
T ss_dssp --CHHHHHHHHHHHEEEEEEEEEEEECTTSHHHHHHHHHHHTTCTTGGGCCCCCHHHHHHHHC
T ss_pred --CHHHHHHHHHHHcCCCCEEEEEecCCcCcHHHHHHHHhhccCccccccccCCHHHHHHHhc
Confidence 34577888888754 677777653222 1 1112223333432 23345556666655
No 63
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=95.97 E-value=0.013 Score=48.88 Aligned_cols=135 Identities=12% Similarity=0.101 Sum_probs=70.4
Q ss_pred cceeeecCCchhHhHhhhcccccccccccc-c--cccchhHHH-----HHHHhh----ceeeeeeecC-----CCC-C-C
Q 024173 102 HKVLHVGPDTCSVVSTLLKEEETEAWGVEP-Y--DIEDADARC-----KSLVHK----GIVRVADIKF-----PLP-Y-R 162 (271)
Q Consensus 102 ~kVLHVGPdtC~VVs~LLkEe~tEAWGVEP-y--died~d~~C-----KsLvrK----GiVRvADIkf-----pLP-Y-R 162 (271)
.+||-+|-.|..+--.|.+....+.+||+. . -++.+..|+ +..--. +-|++..... .++ + .
T Consensus 81 ~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 160 (281)
T 3bzb_A 81 KTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQRCTG 160 (281)
T ss_dssp CEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHHHHS
T ss_pred CeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHhhcc
Confidence 479999999877665666655447888876 2 234455555 211000 1233321111 011 0 2
Q ss_pred CCCccEEEecccccccChhhhcccccchhhccc------CceEEEecCCCc------hhhhHHhhhhcC--Cccccccch
Q 024173 163 AKSFPLVIVSDALDYLSPKYLNKTLPDLARVAS------DGVLIFAGYPGQ------QRAKVAELSKFG--RPAKMRSSS 228 (271)
Q Consensus 163 ~kSFslVivSDaLDyLspryLNkTLPeLaRvsa------dglViF~G~Pgq------qrakvaelskfg--rpaK~rsss 228 (271)
..+|++||.+|.+-+ +..+.+.+.++.|+-. +|.++++-.|.. ...-...+.+.| +..+.....
T Consensus 161 ~~~fD~Ii~~dvl~~--~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~~~~~~~~~~~~~~~~l~~~G~f~v~~~~~~~ 238 (281)
T 3bzb_A 161 LQRFQVVLLADLLSF--HQAHDALLRSVKMLLALPANDPTAVALVTFTHHRPHLAERDLAFFRLVNADGALIAEPWLSPL 238 (281)
T ss_dssp CSSBSEEEEESCCSC--GGGHHHHHHHHHHHBCCTTTCTTCEEEEEECC--------CTHHHHHHHHSTTEEEEEEECCC
T ss_pred CCCCCEEEEeCcccC--hHHHHHHHHHHHHHhcccCCCCCCEEEEEEEeeecccchhHHHHHHHHHhcCCEEEEEecccc
Confidence 478999999999876 4556677778888655 886555443322 223334556777 555554444
Q ss_pred hHHHHHHHhc
Q 024173 229 WWIRYFVQTS 238 (271)
Q Consensus 229 WW~r~F~qt~ 238 (271)
-|...|.++.
T Consensus 239 ~~~~~f~~~~ 248 (281)
T 3bzb_A 239 QMDPMFPDDP 248 (281)
T ss_dssp ----------
T ss_pred ccccccccCC
Confidence 5667776653
No 64
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=95.89 E-value=0.015 Score=46.87 Aligned_cols=107 Identities=21% Similarity=0.195 Sum_probs=73.5
Q ss_pred hHHHHHHhcccccceeeecCCchhHhHhhhccccccccccccccccchhHHHHHHHhhceeeeeeecCCCCCCCCCccEE
Q 024173 90 IPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLV 169 (271)
Q Consensus 90 iP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvrKGiVRvADIkfpLPYR~kSFslV 169 (271)
..+|++.-. .-.+||-||..+......|.+. ..+..|||+.+ +.-..++.... +.+..+|+. .+|+...+|++|
T Consensus 45 ~~~l~~~~~-~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~--~~l~~a~~~~~-~~~~~~d~~-~~~~~~~~fD~v 118 (260)
T 2avn_A 45 GSFLEEYLK-NPCRVLDLGGGTGKWSLFLQER-GFEVVLVDPSK--EMLEVAREKGV-KNVVEAKAE-DLPFPSGAFEAV 118 (260)
T ss_dssp HHHHHHHCC-SCCEEEEETCTTCHHHHHHHTT-TCEEEEEESCH--HHHHHHHHHTC-SCEEECCTT-SCCSCTTCEEEE
T ss_pred HHHHHHhcC-CCCeEEEeCCCcCHHHHHHHHc-CCeEEEEeCCH--HHHHHHHhhcC-CCEEECcHH-HCCCCCCCEEEE
Confidence 344444333 4468999999999888777765 56888988753 12222333222 347778875 467778899999
Q ss_pred EecccccccChhhhcccccchhhccc-CceEEEec
Q 024173 170 IVSDALDYLSPKYLNKTLPDLARVAS-DGVLIFAG 203 (271)
Q Consensus 170 ivSDaLDyLspryLNkTLPeLaRvsa-dglViF~G 203 (271)
+.++.+.++.+. +.+.|-++.|+-. +|.++++-
T Consensus 119 ~~~~~~~~~~~~-~~~~l~~~~~~LkpgG~l~~~~ 152 (260)
T 2avn_A 119 LALGDVLSYVEN-KDKAFSEIRRVLVPDGLLIATV 152 (260)
T ss_dssp EECSSHHHHCSC-HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEcchhhhcccc-HHHHHHHHHHHcCCCeEEEEEe
Confidence 999888777655 7788888888755 56766654
No 65
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=95.86 E-value=0.079 Score=45.61 Aligned_cols=147 Identities=20% Similarity=0.217 Sum_probs=96.5
Q ss_pred HHHHHHhcccccceeeecCCchhHhHhhhccc-cccccccccccccchhHHHHHHHh-hc-----eeeeeeecC---CCC
Q 024173 91 PILKKAYGDSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLVH-KG-----IVRVADIKF---PLP 160 (271)
Q Consensus 91 P~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEPydied~d~~CKsLvr-KG-----iVRvADIkf---pLP 160 (271)
+++...+...-.+||-||-.|-.....|++.- ..+..|++ ++++-...+.... .| -+...|+-- |+|
T Consensus 170 ~~l~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D---~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p 246 (363)
T 3dp7_A 170 KALEIVFSHHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVD---LPQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFP 246 (363)
T ss_dssp HHHHHHGGGCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEE---CHHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCC
T ss_pred HHHHHhcccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEe---CHHHHHHHHHHHHhcCcccceEEEEccccccCCCCC
Confidence 45666666678899999999998888888753 44566665 3444444444332 22 234567654 355
Q ss_pred CCCCCccEEEecccccccChhhhcccccchhhc-ccCceEEEec--CCCchhhhH----Hhhh-----hcCCccccccch
Q 024173 161 YRAKSFPLVIVSDALDYLSPKYLNKTLPDLARV-ASDGVLIFAG--YPGQQRAKV----AELS-----KFGRPAKMRSSS 228 (271)
Q Consensus 161 YR~kSFslVivSDaLDyLspryLNkTLPeLaRv-sadglViF~G--~Pgqqrakv----aels-----kfgrpaK~rsss 228 (271)
++|++|+.+..|.++++...-+.|-++.|+ ..+|.+++.- .|.+..... .... -.....+.|+..
T Consensus 247 ---~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~ 323 (363)
T 3dp7_A 247 ---TGFDAVWMSQFLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDRQRYETASYCLTQISLYFTAMANGNSKMFHSD 323 (363)
T ss_dssp ---CCCSEEEEESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTSCSSHHHHHHHHHHHHHHHHSSCSSCCSCCHH
T ss_pred ---CCcCEEEEechhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCCccccchhhHHHHhhhhHHhhhCCCCcccCHH
Confidence 799999999999999988877888888885 5678777644 333221110 0010 112345678888
Q ss_pred hHHHHHHHhccccch
Q 024173 229 WWIRYFVQTSLEENE 243 (271)
Q Consensus 229 WW~r~F~qt~LeEnE 243 (271)
-|.+.|.++|++.-+
T Consensus 324 e~~~ll~~AGf~~v~ 338 (363)
T 3dp7_A 324 DLIRCIENAGLEVEE 338 (363)
T ss_dssp HHHHHHHTTTEEESC
T ss_pred HHHHHHHHcCCeEEE
Confidence 899999999887543
No 66
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=95.85 E-value=0.013 Score=48.16 Aligned_cols=105 Identities=8% Similarity=0.128 Sum_probs=74.2
Q ss_pred HHHHhcccccceeeecCCchhHhHhhhc--ccccccccccccc--ccchhHHHHHH---HhhceeeeeeecCCCCCCC--
Q 024173 93 LKKAYGDSMHKVLHVGPDTCSVVSTLLK--EEETEAWGVEPYD--IEDADARCKSL---VHKGIVRVADIKFPLPYRA-- 163 (271)
Q Consensus 93 LkkaYGdsM~kVLHVGPdtC~VVs~LLk--Ee~tEAWGVEPyd--ied~d~~CKsL---vrKGiVRvADIkfpLPYR~-- 163 (271)
|.+.....-.+||-||-.+-.....|.+ ....+..||++.+ ++-+..+++.. ..+=-+.++|+. -+|+..
T Consensus 29 l~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~-~~~~~~~~ 107 (299)
T 3g5t_A 29 IDEYHDGERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSD-DFKFLGAD 107 (299)
T ss_dssp HHHHCCSCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTT-CCGGGCTT
T ss_pred HHHHhcCCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHH-hCCccccc
Confidence 3333344667899999999998888886 5688899998764 33444444443 222235567774 345555
Q ss_pred ----CCccEEEecccccccChhhhcccccchhhcc-cCceEEE
Q 024173 164 ----KSFPLVIVSDALDYLSPKYLNKTLPDLARVA-SDGVLIF 201 (271)
Q Consensus 164 ----kSFslVivSDaLDyLspryLNkTLPeLaRvs-adglViF 201 (271)
.+|++|+.+.++.|+ .+.+.|.++.|+- .+|.+++
T Consensus 108 ~~~~~~fD~V~~~~~l~~~---~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 108 SVDKQKIDMITAVECAHWF---DFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp TTTSSCEEEEEEESCGGGS---CHHHHHHHHHHHEEEEEEEEE
T ss_pred cccCCCeeEEeHhhHHHHh---CHHHHHHHHHHhcCCCcEEEE
Confidence 799999999999999 5568888888865 4667766
No 67
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=95.85 E-value=0.027 Score=44.23 Aligned_cols=134 Identities=14% Similarity=0.116 Sum_probs=81.7
Q ss_pred cccceeeecCCchhHhHhhhccc-cccccccccccccchhHHHHHHHhhceeeeeeecCCCCCCCCCccEEEeccccccc
Q 024173 100 SMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYL 178 (271)
Q Consensus 100 sM~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEPydied~d~~CKsLvrKGiVRvADIkfpLPYR~kSFslVivSDaLDyL 178 (271)
.-.+||.||-.|-.....|.+.- ..+..|||+.+ +.-..++.....--+..+|+.- +| -..+|++|+.++++.|+
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~--~~~~~a~~~~~~~~~~~~d~~~-~~-~~~~fD~v~~~~~l~~~ 108 (259)
T 2p35_A 33 RVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDD--DMLEKAADRLPNTNFGKADLAT-WK-PAQKADLLYANAVFQWV 108 (259)
T ss_dssp CCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCH--HHHHHHHHHSTTSEEEECCTTT-CC-CSSCEEEEEEESCGGGS
T ss_pred CCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCH--HHHHHHHHhCCCcEEEECChhh-cC-ccCCcCEEEEeCchhhC
Confidence 34689999999988777776552 56788887653 1112222222233456778753 45 57899999999999999
Q ss_pred Chhhhcccccchhhccc-CceEEEecCCCch----hhhHHhhhhc-------C----CccccccchhHHHHHHHhccc
Q 024173 179 SPKYLNKTLPDLARVAS-DGVLIFAGYPGQQ----RAKVAELSKF-------G----RPAKMRSSSWWIRYFVQTSLE 240 (271)
Q Consensus 179 spryLNkTLPeLaRvsa-dglViF~G~Pgqq----rakvaelskf-------g----rpaK~rsssWW~r~F~qt~Le 240 (271)
. -..+.|.++.|+-. +|.++++- |+.. .....++... . .+....+...|.+.+.++|++
T Consensus 109 ~--~~~~~l~~~~~~L~pgG~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~ 183 (259)
T 2p35_A 109 P--DHLAVLSQLMDQLESGGVLAVQM-PDNLQEPTHIAMHETADGGPWKDAFSGGGLRRKPLPPPSDYFNALSPKSSR 183 (259)
T ss_dssp T--THHHHHHHHGGGEEEEEEEEEEE-ECCTTSHHHHHHHHHHHHSTTGGGC-------CCCCCHHHHHHHHGGGEEE
T ss_pred C--CHHHHHHHHHHhcCCCeEEEEEe-CCCCCcHHHHHHHHHhcCcchHHHhccccccccCCCCHHHHHHHHHhcCCc
Confidence 4 35577888888754 56666653 3221 1112222211 1 123456677788888887774
No 68
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=95.83 E-value=0.011 Score=50.99 Aligned_cols=102 Identities=13% Similarity=0.151 Sum_probs=71.4
Q ss_pred cceeeecCCchhHhHhhhcccccccccccccc--ccchhHHHHHHHhhceeeeeeecCCCCC-CCCCccEEEeccccccc
Q 024173 102 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPY-RAKSFPLVIVSDALDYL 178 (271)
Q Consensus 102 ~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvrKGiVRvADIkfpLPY-R~kSFslVivSDaLDyL 178 (271)
.+||-||..|-.....|.+. ..+..|||+.+ ++-+..+++... --+++.|+.++++- -..+|++|+.+.++.++
T Consensus 47 ~~VLDlGcGtG~~a~~La~~-g~~V~gvD~S~~ml~~Ar~~~~~~~--v~~~~~~~~~~~~~~~~~~fD~Vv~~~~l~~~ 123 (261)
T 3iv6_A 47 STVAVIGASTRFLIEKALER-GASVTVFDFSQRMCDDLAEALADRC--VTIDLLDITAEIPKELAGHFDFVLNDRLINRF 123 (261)
T ss_dssp CEEEEECTTCHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTSSSC--CEEEECCTTSCCCGGGTTCCSEEEEESCGGGS
T ss_pred CEEEEEeCcchHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHhcc--ceeeeeecccccccccCCCccEEEEhhhhHhC
Confidence 58999999998776666654 56888888654 233333333220 11334444442232 24689999999999999
Q ss_pred ChhhhcccccchhhcccCceEEEecCCC
Q 024173 179 SPKYLNKTLPDLARVASDGVLIFAGYPG 206 (271)
Q Consensus 179 spryLNkTLPeLaRvsadglViF~G~Pg 206 (271)
.+..+.+.|.++.|+-..|.++++-.+|
T Consensus 124 ~~~~~~~~l~~l~~lLPGG~l~lS~~~g 151 (261)
T 3iv6_A 124 TTEEARRACLGMLSLVGSGTVRASVKLG 151 (261)
T ss_dssp CHHHHHHHHHHHHHHHTTSEEEEEEEBS
T ss_pred CHHHHHHHHHHHHHhCcCcEEEEEeccC
Confidence 9999999999999977999999886555
No 69
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=95.77 E-value=0.048 Score=42.65 Aligned_cols=123 Identities=15% Similarity=0.225 Sum_probs=75.7
Q ss_pred HHHHhcccccceeeecCCchhHhHhhhccc-ccccccccccc--ccchhHHHHHHHhhce----eeeeeecCCCC--CCC
Q 024173 93 LKKAYGDSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYD--IEDADARCKSLVHKGI----VRVADIKFPLP--YRA 163 (271)
Q Consensus 93 LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEPyd--ied~d~~CKsLvrKGi----VRvADIkfpLP--YR~ 163 (271)
+.+.++..-.+||-+|-.+-.....|.+.- +.+..|||+.+ ++.+..+++. .|+ +..+|+.- +| +..
T Consensus 34 ~~~~f~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~---~~~~~v~~~~~d~~~-~~~~~~~ 109 (214)
T 1yzh_A 34 WRDLFGNDNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLE---VGVPNIKLLWVDGSD-LTDYFED 109 (214)
T ss_dssp HHHHHTSCCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHH---HCCSSEEEEECCSSC-GGGTSCT
T ss_pred HHHHcCCCCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHH---cCCCCEEEEeCCHHH-HHhhcCC
Confidence 446677777899999999998888777664 56889998653 3334444432 333 34567653 55 667
Q ss_pred CCccEEEecccccccChhhh------cccccchhh-cccCceEEEec-CCCchhhhHHhhhhcC
Q 024173 164 KSFPLVIVSDALDYLSPKYL------NKTLPDLAR-VASDGVLIFAG-YPGQQRAKVAELSKFG 219 (271)
Q Consensus 164 kSFslVivSDaLDyLspryL------NkTLPeLaR-vsadglViF~G-~Pgqqrakvaelskfg 219 (271)
.+|++|++.-...+...++- ...|.++.| +..+|+++|.. .+.+...-.+.+.+.|
T Consensus 110 ~~~D~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g 173 (214)
T 1yzh_A 110 GEIDRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNRGLFEYSLVSFSQYG 173 (214)
T ss_dssp TCCSEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHCC
Confidence 88999987633323222221 234556666 46688888875 4344433344555555
No 70
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=95.71 E-value=0.039 Score=46.42 Aligned_cols=137 Identities=15% Similarity=0.176 Sum_probs=87.0
Q ss_pred cccceeeecCCc---hhHhHhhhcc--ccccccccccccccchhHHHHHHHh-hce--eeeeeecCC------------C
Q 024173 100 SMHKVLHVGPDT---CSVVSTLLKE--EETEAWGVEPYDIEDADARCKSLVH-KGI--VRVADIKFP------------L 159 (271)
Q Consensus 100 sM~kVLHVGPdt---C~VVs~LLkE--e~tEAWGVEPydied~d~~CKsLvr-KGi--VRvADIkfp------------L 159 (271)
...+||.||-.+ -.+. .++.+ .+.+..||+.. .+.-...+.+.. .+- +..+|+.-+ +
T Consensus 77 ~~~~vLDlGcG~pt~G~~~-~~~~~~~p~~~v~~vD~s--p~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 153 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTH-EVAQSVNPDARVVYVDID--PMVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRRMI 153 (274)
T ss_dssp CCCEEEEETCCSCCSSCHH-HHHHHHCTTCEEEEEESS--HHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHHHC
T ss_pred CCCEEEEECCCCCCCChHH-HHHHHhCCCCEEEEEECC--hHHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhccC
Confidence 347899999877 5543 34433 34677887753 223333444332 122 345676321 3
Q ss_pred CCCCCCccEEEecccccccChhhhcccccchhh-cccCceEEEecCCC----chhhhHHhhhhcCCccccccchhHHHHH
Q 024173 160 PYRAKSFPLVIVSDALDYLSPKYLNKTLPDLAR-VASDGVLIFAGYPG----QQRAKVAELSKFGRPAKMRSSSWWIRYF 234 (271)
Q Consensus 160 PYR~kSFslVivSDaLDyLspryLNkTLPeLaR-vsadglViF~G~Pg----qqrakvaelskfgrpaK~rsssWW~r~F 234 (271)
|+ .+|.+|+...+|-|+++.-..+.|-+++| +...|.++|+-... +.++-.....+.|.|..+|+..-|.++|
T Consensus 154 d~--~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ei~~~l 231 (274)
T 2qe6_A 154 DF--SRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVDTGLPAQQKLARITRENLGEGWARTPEEIERQF 231 (274)
T ss_dssp CT--TSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBCSSCHHHHHHHHHHHHHHSCCCCBCHHHHHHTT
T ss_pred CC--CCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecCcchHHHHHHHHHHHhcCCCCccCCHHHHHHHh
Confidence 33 38999999999999998777889999999 55677777765332 2211122234456688899999999999
Q ss_pred HHhccccch
Q 024173 235 VQTSLEENE 243 (271)
Q Consensus 235 ~qt~LeEnE 243 (271)
.|++.-|
T Consensus 232 --~G~~l~~ 238 (274)
T 2qe6_A 232 --GDFELVE 238 (274)
T ss_dssp --TTCEECT
T ss_pred --CCCeEcc
Confidence 5776544
No 71
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=95.64 E-value=0.039 Score=42.00 Aligned_cols=95 Identities=18% Similarity=0.213 Sum_probs=64.3
Q ss_pred ceeeecCCchhHhHhhhccccccccccccccccchhHHHHHHHh-hc---eeeeeeecCCCCCCCCCccEEEeccccccc
Q 024173 103 KVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVH-KG---IVRVADIKFPLPYRAKSFPLVIVSDALDYL 178 (271)
Q Consensus 103 kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvr-KG---iVRvADIkfpLPYR~kSFslVivSDaLDyL 178 (271)
+||.+|..+......|.+. ..+..|||+.+ ++-..++.... .| -+..+|+. .+|+...+|++|+.+ +-++
T Consensus 32 ~vLdiGcG~G~~~~~l~~~-~~~v~~vD~s~--~~~~~a~~~~~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~--~~~~ 105 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASL-GYEVTAVDQSS--VGLAKAKQLAQEKGVKITTVQSNLA-DFDIVADAWEGIVSI--FCHL 105 (202)
T ss_dssp EEEECCCSCTHHHHHHHTT-TCEEEEECSSH--HHHHHHHHHHHHHTCCEEEECCBTT-TBSCCTTTCSEEEEE--CCCC
T ss_pred CEEEECCCCCHhHHHHHhC-CCeEEEEECCH--HHHHHHHHHHHhcCCceEEEEcChh-hcCCCcCCccEEEEE--hhcC
Confidence 9999999998877777665 56888887642 22223333222 12 24456663 346667899999985 4566
Q ss_pred Chhhhcccccchhhcc-cCceEEEec
Q 024173 179 SPKYLNKTLPDLARVA-SDGVLIFAG 203 (271)
Q Consensus 179 spryLNkTLPeLaRvs-adglViF~G 203 (271)
.+..+.+.|-++.|+- .+|.++++.
T Consensus 106 ~~~~~~~~l~~~~~~L~pgG~l~~~~ 131 (202)
T 2kw5_A 106 PSSLRQQLYPKVYQGLKPGGVFILEG 131 (202)
T ss_dssp CHHHHHHHHHHHHTTCCSSEEEEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 7778888888988875 467777776
No 72
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=95.59 E-value=0.015 Score=44.12 Aligned_cols=135 Identities=17% Similarity=0.185 Sum_probs=80.7
Q ss_pred cceeeecCCchhHhHhhhccccccccccccccccchhHHHHHHHhhceeeeeeecCC--CCCCCCC-ccEEEeccccccc
Q 024173 102 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFP--LPYRAKS-FPLVIVSDALDYL 178 (271)
Q Consensus 102 ~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvrKGiVRvADIkfp--LPYR~kS-FslVivSDaLDyL 178 (271)
.+||.+|..+......|.+. ..+..|||+.+ ..-..++.. ...-+...|+.-. .|....+ |++|+.+++|.
T Consensus 54 ~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~--~~~~~a~~~-~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~l~-- 127 (227)
T 3e8s_A 54 ERVLDLGCGEGWLLRALADR-GIEAVGVDGDR--TLVDAARAA-GAGEVHLASYAQLAEAKVPVGKDYDLICANFALL-- 127 (227)
T ss_dssp SEEEEETCTTCHHHHHHHTT-TCEEEEEESCH--HHHHHHHHT-CSSCEEECCHHHHHTTCSCCCCCEEEEEEESCCC--
T ss_pred CEEEEeCCCCCHHHHHHHHC-CCEEEEEcCCH--HHHHHHHHh-cccccchhhHHhhcccccccCCCccEEEECchhh--
Confidence 78999999999888877766 66888887753 122223322 1222333443221 2444454 99999999998
Q ss_pred Chhhhcccccchhhccc-CceEEEec-CCCchhhh-------HHhhhhc-----CCccccccchhHHHHHHHhccccch
Q 024173 179 SPKYLNKTLPDLARVAS-DGVLIFAG-YPGQQRAK-------VAELSKF-----GRPAKMRSSSWWIRYFVQTSLEENE 243 (271)
Q Consensus 179 spryLNkTLPeLaRvsa-dglViF~G-~Pgqqrak-------vaelskf-----grpaK~rsssWW~r~F~qt~LeEnE 243 (271)
..-+.+.|.++.|+-. +|.++++. .|...... ..+...+ +.+...++...|.+.+.++|++..+
T Consensus 128 -~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~ 205 (227)
T 3e8s_A 128 -HQDIIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALDMAGLRLVS 205 (227)
T ss_dssp -SSCCHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHTTEEEEE
T ss_pred -hhhHHHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHHHHHHHHcCCeEEE
Confidence 3345577888888755 56666655 33221110 0001111 1223455778899999999987543
No 73
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=95.55 E-value=0.031 Score=45.89 Aligned_cols=98 Identities=11% Similarity=0.118 Sum_probs=64.8
Q ss_pred ccceeeecCCchhHhHhhhccc--ccccccccccc--ccchhHHHHHHHhhceeeeeeecCCCCCCCCCccEEEeccccc
Q 024173 101 MHKVLHVGPDTCSVVSTLLKEE--ETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALD 176 (271)
Q Consensus 101 M~kVLHVGPdtC~VVs~LLkEe--~tEAWGVEPyd--ied~d~~CKsLvrKGiVRvADIkfpLPYR~kSFslVivSDaLD 176 (271)
-.+||.||..|-.....|.+.- ..+..|||+.+ ++-+..+++..-.+=-+.++|+. .+|+ +.+|++|+....+.
T Consensus 23 ~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~-~~~~-~~~fD~v~~~~~l~ 100 (284)
T 3gu3_A 23 PVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDAT-EIEL-NDKYDIAICHAFLL 100 (284)
T ss_dssp CCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTT-TCCC-SSCEEEEEEESCGG
T ss_pred CCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchh-hcCc-CCCeeEEEECChhh
Confidence 4689999999998888887662 46888987653 22222222211112235667876 4666 57999999999999
Q ss_pred ccChhhhcccccchhhccc-CceEEEe
Q 024173 177 YLSPKYLNKTLPDLARVAS-DGVLIFA 202 (271)
Q Consensus 177 yLspryLNkTLPeLaRvsa-dglViF~ 202 (271)
++... .+.|-++.|+-. +|.+++.
T Consensus 101 ~~~~~--~~~l~~~~~~LkpgG~l~~~ 125 (284)
T 3gu3_A 101 HMTTP--ETMLQKMIHSVKKGGKIICF 125 (284)
T ss_dssp GCSSH--HHHHHHHHHTEEEEEEEEEE
T ss_pred cCCCH--HHHHHHHHHHcCCCCEEEEE
Confidence 99633 467777777654 5666544
No 74
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=95.43 E-value=0.025 Score=45.29 Aligned_cols=96 Identities=25% Similarity=0.343 Sum_probs=67.8
Q ss_pred ccceeeecCCchhHhHhhhccc-ccccccccccc--ccchhHHHHHHHhhce----eeeeeecCCCCCCCCCccEEEecc
Q 024173 101 MHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYD--IEDADARCKSLVHKGI----VRVADIKFPLPYRAKSFPLVIVSD 173 (271)
Q Consensus 101 M~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEPyd--ied~d~~CKsLvrKGi----VRvADIkfpLPYR~kSFslVivSD 173 (271)
-.+||.||..+......|.+.. ..+..|||+.+ ++.+..+++ ..|+ +..+|+. .+|+...+|++|+.++
T Consensus 38 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~---~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~ 113 (276)
T 3mgg_A 38 GAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTE---KNGIKNVKFLQANIF-SLPFEDSSFDHIFVCF 113 (276)
T ss_dssp TCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHH---HTTCCSEEEEECCGG-GCCSCTTCEEEEEEES
T ss_pred CCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHH---HcCCCCcEEEEcccc-cCCCCCCCeeEEEEec
Confidence 4589999999999988888764 57888988753 222322222 2232 3456765 5677789999999999
Q ss_pred cccccChhhhcccccchhhcc-cCceEEEe
Q 024173 174 ALDYLSPKYLNKTLPDLARVA-SDGVLIFA 202 (271)
Q Consensus 174 aLDyLspryLNkTLPeLaRvs-adglViF~ 202 (271)
.|.++.. ..+.|.++.|+- .+|+++++
T Consensus 114 ~l~~~~~--~~~~l~~~~~~L~pgG~l~~~ 141 (276)
T 3mgg_A 114 VLEHLQS--PEEALKSLKKVLKPGGTITVI 141 (276)
T ss_dssp CGGGCSC--HHHHHHHHHHHEEEEEEEEEE
T ss_pred hhhhcCC--HHHHHHHHHHHcCCCcEEEEE
Confidence 9999964 347778888865 46677664
No 75
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=95.35 E-value=0.091 Score=41.51 Aligned_cols=93 Identities=13% Similarity=0.079 Sum_probs=63.5
Q ss_pred ccccceeeecCCchhHhHhhhccccccccccccccccchhHHHHHHHhhceeeeeeecCCCCCC-CCCccEEEecccccc
Q 024173 99 DSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYR-AKSFPLVIVSDALDY 177 (271)
Q Consensus 99 dsM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvrKGiVRvADIkfpLPYR-~kSFslVivSDaLDy 177 (271)
..-.+||-||-.|......|.+. ..+..|||+.+ +.-..++....+--+..+|+.-++|+. ..+|++|+.++
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~--~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~~---- 119 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQ-AARWAAYDFSP--ELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSRR---- 119 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGG-SSEEEEEESCH--HHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEES----
T ss_pred CCCCeEEEeCCCCCHHHHHHHHc-CCEEEEEECCH--HHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeCC----
Confidence 34468999999998877777766 56888988753 122223332233346678887778988 88999998872
Q ss_pred cChhhhcccccchhhcc-cCceEEEe
Q 024173 178 LSPKYLNKTLPDLARVA-SDGVLIFA 202 (271)
Q Consensus 178 LspryLNkTLPeLaRvs-adglViF~ 202 (271)
...+.|.++.|+- .+|.++..
T Consensus 120 ----~~~~~l~~~~~~LkpgG~l~~~ 141 (226)
T 3m33_A 120 ----GPTSVILRLPELAAPDAHFLYV 141 (226)
T ss_dssp ----CCSGGGGGHHHHEEEEEEEEEE
T ss_pred ----CHHHHHHHHHHHcCCCcEEEEe
Confidence 3456777887764 45666633
No 76
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=95.34 E-value=0.042 Score=45.21 Aligned_cols=135 Identities=13% Similarity=0.149 Sum_probs=87.4
Q ss_pred ccceeeecCCchhHhHhhhccccccccccccccccchhHHHHHHHh-hce-----eeeeeecCCCCCCCCCccEEEeccc
Q 024173 101 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVH-KGI-----VRVADIKFPLPYRAKSFPLVIVSDA 174 (271)
Q Consensus 101 M~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvr-KGi-----VRvADIkfpLPYR~kSFslVivSDa 174 (271)
-.+||-||-.+-.....|.+.-..+..||++.+ +.-..++...+ .|+ +..+|+. .+ ..+|++|+..++
T Consensus 73 ~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~--~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~---~~~fD~v~~~~~ 146 (302)
T 3hem_A 73 GMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSE--NQYAHDKAMFDEVDSPRRKEVRIQGWE-EF---DEPVDRIVSLGA 146 (302)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHCCEEEEEECCH--HHHHHHHHHHHHSCCSSCEEEEECCGG-GC---CCCCSEEEEESC
T ss_pred cCEEEEeeccCcHHHHHHHHhCCCEEEEEECCH--HHHHHHHHHHHhcCCCCceEEEECCHH-Hc---CCCccEEEEcch
Confidence 348999999998888888876347788887643 12222333322 232 4567773 23 789999999999
Q ss_pred cccc-------Chhhhcccccchhhcc-cCceEEEecC--CCchhhhH-------------HhhhhcCCcc-ccccchhH
Q 024173 175 LDYL-------SPKYLNKTLPDLARVA-SDGVLIFAGY--PGQQRAKV-------------AELSKFGRPA-KMRSSSWW 230 (271)
Q Consensus 175 LDyL-------spryLNkTLPeLaRvs-adglViF~G~--Pgqqrakv-------------aelskfgrpa-K~rsssWW 230 (271)
+.++ .++.+.+.|.++.|+- .+|.+++... +....... .-+.++--|- .+.+...|
T Consensus 147 ~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~s~~~~ 226 (302)
T 3hem_A 147 FEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIPDKEEAQELGLTSPMSLLRFIKFILTEIFPGGRLPRISQV 226 (302)
T ss_dssp GGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTCTTCCCCCHHHH
T ss_pred HHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEeccCccchhhccccccccccchHHHHHHhcCCCCCCCCHHHH
Confidence 9999 6688888999998865 5677777653 22211100 1122222222 46677788
Q ss_pred HHHHHHhcccc
Q 024173 231 IRYFVQTSLEE 241 (271)
Q Consensus 231 ~r~F~qt~LeE 241 (271)
.+.+.++|++.
T Consensus 227 ~~~l~~aGf~~ 237 (302)
T 3hem_A 227 DYYSSNAGWKV 237 (302)
T ss_dssp HHHHHHHTCEE
T ss_pred HHHHHhCCcEE
Confidence 88888888753
No 77
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=95.27 E-value=0.028 Score=41.42 Aligned_cols=105 Identities=12% Similarity=0.066 Sum_probs=66.8
Q ss_pred cccceeeecCCchhHhHhhhcccccccccccccc--ccchhHHHHHHHhh---ceeeeeeecCCCCCCCCCccEEEeccc
Q 024173 100 SMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHK---GIVRVADIKFPLPYRAKSFPLVIVSDA 174 (271)
Q Consensus 100 sM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvrK---GiVRvADIkfpLPYR~kSFslVivSDa 174 (271)
.-.+||.+|..+......+.+. ..+..|||+.+ ++.+..+++..--. --+..+|+.-+++ ..+|++|+....
T Consensus 52 ~~~~vLdiG~G~G~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~--~~~~D~v~~~~~ 128 (194)
T 1dus_A 52 KDDDILDLGCGYGVIGIALADE-VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVK--DRKYNKIITNPP 128 (194)
T ss_dssp TTCEEEEETCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCT--TSCEEEEEECCC
T ss_pred CCCeEEEeCCCCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccc--cCCceEEEECCC
Confidence 3358999999998888888877 77888887543 33343343322111 2344566655554 778999998655
Q ss_pred ccccChhhhcccccchhhc-ccCceEEEecCCCch
Q 024173 175 LDYLSPKYLNKTLPDLARV-ASDGVLIFAGYPGQQ 208 (271)
Q Consensus 175 LDyLspryLNkTLPeLaRv-sadglViF~G~Pgqq 208 (271)
+.+ ....+.+.|-++.|+ ..+|.++++....+.
T Consensus 129 ~~~-~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~ 162 (194)
T 1dus_A 129 IRA-GKEVLHRIIEEGKELLKDNGEIWVVIQTKQG 162 (194)
T ss_dssp STT-CHHHHHHHHHHHHHHEEEEEEEEEEEESTHH
T ss_pred ccc-chhHHHHHHHHHHHHcCCCCEEEEEECCCCC
Confidence 432 345556677777765 557788777655443
No 78
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=95.19 E-value=0.029 Score=46.50 Aligned_cols=103 Identities=16% Similarity=0.119 Sum_probs=70.0
Q ss_pred ccceeeecCCchhHhHhhhcccccccccccccc--ccchhHHHHHHHh--------hceeeeeeecCCC---CCC--CCC
Q 024173 101 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVH--------KGIVRVADIKFPL---PYR--AKS 165 (271)
Q Consensus 101 M~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvr--------KGiVRvADIkfpL---PYR--~kS 165 (271)
-.+||.+|-.|......|++....+..||++.+ ++.+..+++..-. +--+.++|+.-.. |+. ..+
T Consensus 35 ~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 114 (313)
T 3bgv_A 35 DITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQMC 114 (313)
T ss_dssp CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTTCC
T ss_pred CCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCCCC
Confidence 358999999999998888876666788887643 2223333322110 1234667775321 343 459
Q ss_pred ccEEEeccccccc--Chhhhcccccchhhcc-cCceEEEec
Q 024173 166 FPLVIVSDALDYL--SPKYLNKTLPDLARVA-SDGVLIFAG 203 (271)
Q Consensus 166 FslVivSDaLDyL--spryLNkTLPeLaRvs-adglViF~G 203 (271)
|++|+.+.+|.|+ ++..+.+.|-++.|+- .+|++|++-
T Consensus 115 fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 155 (313)
T 3bgv_A 115 FDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTT 155 (313)
T ss_dssp EEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred EEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEec
Confidence 9999999999998 6677788888998864 567777654
No 79
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=95.15 E-value=0.03 Score=43.06 Aligned_cols=100 Identities=17% Similarity=0.171 Sum_probs=64.4
Q ss_pred ccceeeecCCchhHhHhhhcccccccccccccc--ccchhHHHHHHHhhc-eeeeeeecCCCCCCCCCccEEEecccccc
Q 024173 101 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKG-IVRVADIKFPLPYRAKSFPLVIVSDALDY 177 (271)
Q Consensus 101 M~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvrKG-iVRvADIkfpLPYR~kSFslVivSDaLDy 177 (271)
-.+||-+|..+......|.+....+..|||..+ ++-+..+++..--.+ -+..+|+. ++-..+|++|+....+++
T Consensus 61 ~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~---~~~~~~fD~i~~~~~~~~ 137 (205)
T 3grz_A 61 PLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLL---ADVDGKFDLIVANILAEI 137 (205)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTT---TTCCSCEEEEEEESCHHH
T ss_pred CCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEecccc---ccCCCCceEEEECCcHHH
Confidence 358999999998887777765556888888643 333444443322111 23455653 233589999998766654
Q ss_pred cChhhhcccccchhhc-ccCceEEEecCCCch
Q 024173 178 LSPKYLNKTLPDLARV-ASDGVLIFAGYPGQQ 208 (271)
Q Consensus 178 LspryLNkTLPeLaRv-sadglViF~G~Pgqq 208 (271)
+.+.+.++.|+ ..+|.+++++....+
T Consensus 138 -----~~~~l~~~~~~L~~gG~l~~~~~~~~~ 164 (205)
T 3grz_A 138 -----LLDLIPQLDSHLNEDGQVIFSGIDYLQ 164 (205)
T ss_dssp -----HHHHGGGSGGGEEEEEEEEEEEEEGGG
T ss_pred -----HHHHHHHHHHhcCCCCEEEEEecCccc
Confidence 45667777775 567888887754443
No 80
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=95.12 E-value=0.23 Score=42.81 Aligned_cols=149 Identities=13% Similarity=0.152 Sum_probs=93.7
Q ss_pred HhHHHHHHhc-ccccceeeecCCchhHhHhhhccc-cccccccccccccchhHHHHHHH-hhce---e--eeeeecCCCC
Q 024173 89 AIPILKKAYG-DSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLV-HKGI---V--RVADIKFPLP 160 (271)
Q Consensus 89 AiP~LkkaYG-dsM~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEPydied~d~~CKsLv-rKGi---V--RvADIkfpLP 160 (271)
.++.+-+.|+ ..-.+||-||-.+-.....|++.- +.+..|+ |++++-...+..+ +.|+ | ...|+.-|+|
T Consensus 190 ~~~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~---D~~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~p 266 (369)
T 3gwz_A 190 EAGQVAAAYDFSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLL---ERPPVAEEARELLTGRGLADRCEILPGDFFETIP 266 (369)
T ss_dssp HHHHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEE---ECHHHHHHHHHHHHHTTCTTTEEEEECCTTTCCC
T ss_pred hHHHHHHhCCCccCcEEEEeCCCccHHHHHHHHHCCCCeEEEE---cCHHHHHHHHHhhhhcCcCCceEEeccCCCCCCC
Confidence 3566667775 345799999999988888888763 3345554 4444334444332 3343 3 4466654555
Q ss_pred CCCCCccEEEecccccccChhhhcccccchhhcc-cCceEEEec--CCCchh--hhHHhhhhc-CCccccccchhHHHHH
Q 024173 161 YRAKSFPLVIVSDALDYLSPKYLNKTLPDLARVA-SDGVLIFAG--YPGQQR--AKVAELSKF-GRPAKMRSSSWWIRYF 234 (271)
Q Consensus 161 YR~kSFslVivSDaLDyLspryLNkTLPeLaRvs-adglViF~G--~Pgqqr--akvaelskf-grpaK~rsssWW~r~F 234 (271)
- +|++|+.+++|.|.+....-+.|-++.|+= .+|.+++.- .|.+.. +...++.-+ ....+.|+...|.+.|
T Consensus 267 ~---~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll 343 (369)
T 3gwz_A 267 D---GADVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDERPAASTLFVDLLLLVLVGGAERSESEFAALL 343 (369)
T ss_dssp S---SCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHHHHHHHHHHHHHHSCCCBCHHHHHHHH
T ss_pred C---CceEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhHhhHHHHhhcCCccCCHHHHHHHH
Confidence 4 899999999999999877667777777764 467766643 232211 112222111 0124578889999999
Q ss_pred HHhccccch
Q 024173 235 VQTSLEENE 243 (271)
Q Consensus 235 ~qt~LeEnE 243 (271)
.++|++.-+
T Consensus 344 ~~aGf~~~~ 352 (369)
T 3gwz_A 344 EKSGLRVER 352 (369)
T ss_dssp HTTTEEEEE
T ss_pred HHCCCeEEE
Confidence 999887543
No 81
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=95.08 E-value=0.023 Score=47.91 Aligned_cols=102 Identities=20% Similarity=0.217 Sum_probs=69.2
Q ss_pred HHHHHHhcccccceeeecCCchhHhHhhhcccccccccccccc--ccchhHHHHHHHhhc-eeeeeeecCCCCCCCCCcc
Q 024173 91 PILKKAYGDSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKG-IVRVADIKFPLPYRAKSFP 167 (271)
Q Consensus 91 P~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvrKG-iVRvADIkfpLPYR~kSFs 167 (271)
-.|.+.-+ .-..||-||-.|-.....| .+...+..||+|.+ |+.+ +. +.+ -+.++|.. .+|+...||+
T Consensus 31 ~~l~~~~~-~~~~vLDvGcGtG~~~~~l-~~~~~~v~gvD~s~~ml~~a----~~--~~~v~~~~~~~e-~~~~~~~sfD 101 (257)
T 4hg2_A 31 RWLGEVAP-ARGDALDCGCGSGQASLGL-AEFFERVHAVDPGEAQIRQA----LR--HPRVTYAVAPAE-DTGLPPASVD 101 (257)
T ss_dssp HHHHHHSS-CSSEEEEESCTTTTTHHHH-HTTCSEEEEEESCHHHHHTC----CC--CTTEEEEECCTT-CCCCCSSCEE
T ss_pred HHHHHhcC-CCCCEEEEcCCCCHHHHHH-HHhCCEEEEEeCcHHhhhhh----hh--cCCceeehhhhh-hhcccCCccc
Confidence 34444333 3357999999987655444 45567899998864 2222 11 112 23455553 4677799999
Q ss_pred EEEecccccccChhhhcccccchhhc-ccCceEEEecC
Q 024173 168 LVIVSDALDYLSPKYLNKTLPDLARV-ASDGVLIFAGY 204 (271)
Q Consensus 168 lVivSDaLDyLspryLNkTLPeLaRv-sadglViF~G~ 204 (271)
+|+++.++.|+.| .+.+.|++|| ..+|++++.++
T Consensus 102 ~v~~~~~~h~~~~---~~~~~e~~rvLkpgG~l~~~~~ 136 (257)
T 4hg2_A 102 VAIAAQAMHWFDL---DRFWAELRRVARPGAVFAAVTY 136 (257)
T ss_dssp EEEECSCCTTCCH---HHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEEeeehhHhhH---HHHHHHHHHHcCCCCEEEEEEC
Confidence 9999999999976 4789999998 45677777664
No 82
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=95.08 E-value=0.095 Score=43.93 Aligned_cols=147 Identities=18% Similarity=0.166 Sum_probs=91.6
Q ss_pred hHHHHHHhc-ccccceeeecCCchhHhHhhhccc-cccccccccccccchhHHHHHH-Hhhce---e--eeeeecCCCCC
Q 024173 90 IPILKKAYG-DSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSL-VHKGI---V--RVADIKFPLPY 161 (271)
Q Consensus 90 iP~LkkaYG-dsM~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEPydied~d~~CKsL-vrKGi---V--RvADIkfpLPY 161 (271)
+|.+-+.|. ..-.+||-||-.|-.....|++.- ..+..|+ |++++-...+.- .+.|+ | ...|+--|+|-
T Consensus 158 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~---D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~p~ 234 (332)
T 3i53_A 158 YTGIAAKYDWAALGHVVDVGGGSGGLLSALLTAHEDLSGTVL---DLQGPASAAHRRFLDTGLSGRAQVVVGSFFDPLPA 234 (332)
T ss_dssp HTTGGGSSCCGGGSEEEEETCTTSHHHHHHHHHCTTCEEEEE---ECHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCC
T ss_pred HHHHHHhCCCCCCCEEEEeCCChhHHHHHHHHHCCCCeEEEe---cCHHHHHHHHHhhhhcCcCcCeEEecCCCCCCCCC
Confidence 344444554 345789999999998888888653 3455555 444433333332 22343 4 34566556664
Q ss_pred CCCCccEEEecccccccChhhhcccccchhhc-ccCceEEEec--CCCchhhhHHhhhhc-CCccccccchhHHHHHHHh
Q 024173 162 RAKSFPLVIVSDALDYLSPKYLNKTLPDLARV-ASDGVLIFAG--YPGQQRAKVAELSKF-GRPAKMRSSSWWIRYFVQT 237 (271)
Q Consensus 162 R~kSFslVivSDaLDyLspryLNkTLPeLaRv-sadglViF~G--~Pgqqrakvaelskf-grpaK~rsssWW~r~F~qt 237 (271)
+|++|+.+++|.|.+....-+.|-++.|+ ..+|.+++.- .|.......-++.-+ .-..+.|+..-|.+.|.++
T Consensus 235 ---~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~a 311 (332)
T 3i53_A 235 ---GAGGYVLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGDEHAGTGMDLRMLTYFGGKERSLAELGELAAQA 311 (332)
T ss_dssp ---SCSEEEEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC---CCHHHHHHHHHHHSCCCCCHHHHHHHHHHT
T ss_pred ---CCcEEEEehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCCCCccHHHHHHHHhhCCCCCCCHHHHHHHHHHC
Confidence 89999999999999998888888888886 5577776654 222211111121110 1234567888888888888
Q ss_pred ccccc
Q 024173 238 SLEEN 242 (271)
Q Consensus 238 ~LeEn 242 (271)
|++.-
T Consensus 312 Gf~~~ 316 (332)
T 3i53_A 312 GLAVR 316 (332)
T ss_dssp TEEEE
T ss_pred CCEEE
Confidence 88654
No 83
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=94.79 E-value=0.09 Score=44.74 Aligned_cols=148 Identities=16% Similarity=0.197 Sum_probs=91.5
Q ss_pred HHHHHHhc-ccccceeeecCCchhHhHhhhccc-cccccccccccccchhHHHH--HHHhhceeeeeeecCCCCCCCCCc
Q 024173 91 PILKKAYG-DSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCK--SLVHKGIVRVADIKFPLPYRAKSF 166 (271)
Q Consensus 91 P~LkkaYG-dsM~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEPydied~d~~CK--sLvrKGiVRvADIkfpLPYR~kSF 166 (271)
+.+-+.|. ..-.+||-||-.|-.....|++.- +.+..|++.-++-. ..+.+ .+-.+=-+...|+--++| +|
T Consensus 174 ~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~-~~~~~~~~~~~~v~~~~~d~~~~~p----~~ 248 (348)
T 3lst_A 174 LILARAGDFPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRAEVVA-RHRLDAPDVAGRWKVVEGDFLREVP----HA 248 (348)
T ss_dssp HHHHHHSCCCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECHHHHT-TCCCCCGGGTTSEEEEECCTTTCCC----CC
T ss_pred HHHHHhCCccCCceEEEECCccCHHHHHHHHHCCCCEEEEecCHHHhh-cccccccCCCCCeEEEecCCCCCCC----CC
Confidence 34445554 345689999999999888888753 34555555422211 11111 010011234577766777 89
Q ss_pred cEEEecccccccChhhhcccccchhhcc-cCceEEEec--CCCch---hhhHHhhhhc-CCccccccchhHHHHHHHhcc
Q 024173 167 PLVIVSDALDYLSPKYLNKTLPDLARVA-SDGVLIFAG--YPGQQ---RAKVAELSKF-GRPAKMRSSSWWIRYFVQTSL 239 (271)
Q Consensus 167 slVivSDaLDyLspryLNkTLPeLaRvs-adglViF~G--~Pgqq---rakvaelskf-grpaK~rsssWW~r~F~qt~L 239 (271)
++|+.+++|.++++...-+.|-++.|+= .+|.+++.- .|... .....++.-+ ....+.|+..-|.+.|.++|+
T Consensus 249 D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf 328 (348)
T 3lst_A 249 DVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAHQSKEMDFMMLAARTGQERTAAELEPLFTAAGL 328 (348)
T ss_dssp SEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCCHHHHHHHHHHHTTSCCCCBHHHHHHHHHHTTE
T ss_pred cEEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhhhcChhhhhcCCCcCCCHHHHHHHHHHCCC
Confidence 9999999999999988888899998874 467766643 22221 1112222111 123467888899999999998
Q ss_pred ccch
Q 024173 240 EENE 243 (271)
Q Consensus 240 eEnE 243 (271)
+..+
T Consensus 329 ~~~~ 332 (348)
T 3lst_A 329 RLDR 332 (348)
T ss_dssp EEEE
T ss_pred ceEE
Confidence 7543
No 84
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=94.66 E-value=0.65 Score=39.40 Aligned_cols=147 Identities=14% Similarity=0.128 Sum_probs=90.3
Q ss_pred hHHHHHHhc-ccccceeeecCCchhHhHhhhccc-cccccccccccccchhHHHHHHH-hhce---e--eeeeecCCCCC
Q 024173 90 IPILKKAYG-DSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLV-HKGI---V--RVADIKFPLPY 161 (271)
Q Consensus 90 iP~LkkaYG-dsM~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEPydied~d~~CKsLv-rKGi---V--RvADIkfpLPY 161 (271)
++.+-+.|+ ..-.+||-||-.+-.....|++.- +.+..|++. +++-..++... +.|+ | ...|+-- +|+
T Consensus 179 ~~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~---~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~ 254 (359)
T 1x19_A 179 IQLLLEEAKLDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL---PGAIDLVNENAAEKGVADRMRGIAVDIYK-ESY 254 (359)
T ss_dssp HHHHHHHCCCTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC---GGGHHHHHHHHHHTTCTTTEEEEECCTTT-SCC
T ss_pred HHHHHHhcCCCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec---HHHHHHHHHHHHhcCCCCCEEEEeCcccc-CCC
Confidence 344445554 345689999999999888888764 456777765 33333444332 2232 3 3456532 244
Q ss_pred CCCCccEEEecccccccChhhhcccccchhhc-ccCceEEEec--CCCchhhhHH---h-hhhc--CCc-cccccchhHH
Q 024173 162 RAKSFPLVIVSDALDYLSPKYLNKTLPDLARV-ASDGVLIFAG--YPGQQRAKVA---E-LSKF--GRP-AKMRSSSWWI 231 (271)
Q Consensus 162 R~kSFslVivSDaLDyLspryLNkTLPeLaRv-sadglViF~G--~Pgqqrakva---e-lskf--grp-aK~rsssWW~ 231 (271)
. .+++|+.++.|.++++....+.|-++.|+ ..+|.+++.- .|.+...... + +..+ |+. ..+++..-|.
T Consensus 255 ~--~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~t~~e~~ 332 (359)
T 1x19_A 255 P--EADAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVIDDPENPNFDYLSHYILGAGMPFSVLGFKEQARYK 332 (359)
T ss_dssp C--CCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCCCTTSCCHHHHHHHGGGGGSSCCCCCCCCGGGHH
T ss_pred C--CCCEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEecccCCCCCchHHHHHHHHHhcCCCCcccCCCCHHHHH
Confidence 3 34999999999999988888888888887 4567776554 2221100000 1 1111 322 2348888899
Q ss_pred HHHHHhccccc
Q 024173 232 RYFVQTSLEEN 242 (271)
Q Consensus 232 r~F~qt~LeEn 242 (271)
+.+.++|++.-
T Consensus 333 ~ll~~aGf~~v 343 (359)
T 1x19_A 333 EILESLGYKDV 343 (359)
T ss_dssp HHHHHHTCEEE
T ss_pred HHHHHCCCceE
Confidence 99999888653
No 85
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=94.59 E-value=0.046 Score=39.16 Aligned_cols=101 Identities=11% Similarity=0.087 Sum_probs=66.5
Q ss_pred cccceeeecCCchhHhHhhhcc--ccccccccccccccchhHHHHHHHhhceeeeeeecCC-----CC--CCCCCccEEE
Q 024173 100 SMHKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFP-----LP--YRAKSFPLVI 170 (271)
Q Consensus 100 sM~kVLHVGPdtC~VVs~LLkE--e~tEAWGVEPydied~d~~CKsLvrKGiVRvADIkfp-----LP--YR~kSFslVi 170 (271)
.-.+||.+|..+......|++. .+.+..|+|+.++.+. .+--+..+|+.-. +| +...+|++|+
T Consensus 22 ~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~--------~~~~~~~~d~~~~~~~~~~~~~~~~~~~D~i~ 93 (180)
T 1ej0_A 22 PGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLPMDPI--------VGVDFLQGDFRDELVMKALLERVGDSKVQVVM 93 (180)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSCCCCC--------TTEEEEESCTTSHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcccccc--------CcEEEEEcccccchhhhhhhccCCCCceeEEE
Confidence 3458999999998888888776 2478999998775443 1222345666432 11 5567999999
Q ss_pred ecccccccChhh---------hcccccchhhc-ccCceEEEecCCCch
Q 024173 171 VSDALDYLSPKY---------LNKTLPDLARV-ASDGVLIFAGYPGQQ 208 (271)
Q Consensus 171 vSDaLDyLspry---------LNkTLPeLaRv-sadglViF~G~Pgqq 208 (271)
....+.+..-.. +.+.|.++.|+ ..+|.++++....++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~ 141 (180)
T 1ej0_A 94 SDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEG 141 (180)
T ss_dssp ECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESSTT
T ss_pred ECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCCc
Confidence 877776654331 14566666665 557888887755544
No 86
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=94.56 E-value=0.065 Score=45.56 Aligned_cols=135 Identities=10% Similarity=0.147 Sum_probs=86.5
Q ss_pred cccceeeecCCchhHhHhhhccc-cccccccccccccchhHHHHHHHhhc-eeeeeeecCCCCCCCCCccEEEecccccc
Q 024173 100 SMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLVHKG-IVRVADIKFPLPYRAKSFPLVIVSDALDY 177 (271)
Q Consensus 100 sM~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEPydied~d~~CKsLvrKG-iVRvADIkfpLPYR~kSFslVivSDaLDy 177 (271)
...+||.||-.|-.....|++.- ..+..|++. +++-..++.+ .+ -+...|+--++| .|++|+.++.|.+
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~---~~~~~~a~~~--~~v~~~~~d~~~~~p----~~D~v~~~~~lh~ 258 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIICETFPKLKCIVFDR---PQVVENLSGS--NNLTYVGGDMFTSIP----NADAVLLKYILHN 258 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC---HHHHTTCCCB--TTEEEEECCTTTCCC----CCSEEEEESCGGG
T ss_pred cCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC---HHHHhhcccC--CCcEEEeccccCCCC----CccEEEeehhhcc
Confidence 34689999999999988888653 445666654 2222222221 23 234567743666 3999999999999
Q ss_pred cChhhhcccccchhhccc----CceEEEec--CCCch-------hhhHHhhhhcCCccccccchhHHHHHHHhccccch
Q 024173 178 LSPKYLNKTLPDLARVAS----DGVLIFAG--YPGQQ-------RAKVAELSKFGRPAKMRSSSWWIRYFVQTSLEENE 243 (271)
Q Consensus 178 LspryLNkTLPeLaRvsa----dglViF~G--~Pgqq-------rakvaelskfgrpaK~rsssWW~r~F~qt~LeEnE 243 (271)
++....-+.|-++.|+=. +|.+++.- .|.+. .....++.-+....+.|+..-|.+.|.++|++.-+
T Consensus 259 ~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~t~~e~~~ll~~aGf~~~~ 337 (352)
T 1fp2_A 259 WTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMACLNGKERNEEEWKKLFIEAGFQHYK 337 (352)
T ss_dssp SCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEECTTTSCHHHHHHHHHHHHHGGGGTCCCEEHHHHHHHHHHTTCCEEE
T ss_pred CCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeecCCCCCccchhhhHhhccHHHHhccCCCCCHHHHHHHHHHCCCCeeE
Confidence 988777788888888744 68777664 22211 11122222111115668888899999999987543
No 87
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=94.42 E-value=0.085 Score=54.52 Aligned_cols=105 Identities=11% Similarity=0.128 Sum_probs=77.5
Q ss_pred cccceeeecCCchhHhHhhhcccc--cccccccccc--ccchhHHHHHHHh---hce----eeeeeecCCCCCCCCCccE
Q 024173 100 SMHKVLHVGPDTCSVVSTLLKEEE--TEAWGVEPYD--IEDADARCKSLVH---KGI----VRVADIKFPLPYRAKSFPL 168 (271)
Q Consensus 100 sM~kVLHVGPdtC~VVs~LLkEe~--tEAWGVEPyd--ied~d~~CKsLvr---KGi----VRvADIkfpLPYR~kSFsl 168 (271)
.-.+||-||=.+-.....|.+... .+..|||+.+ ++-|..+.+.... .|+ +..+|+. .+|++..+|++
T Consensus 721 ~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~-dLp~~d~sFDl 799 (950)
T 3htx_A 721 SASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSIL-EFDSRLHDVDI 799 (950)
T ss_dssp CCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTT-SCCTTSCSCCE
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchH-hCCcccCCeeE
Confidence 345899999999999888887763 6899998865 2333333332211 133 4556764 47888899999
Q ss_pred EEecccccccChhhhcccccchhhcccCceEEEecCCC
Q 024173 169 VIVSDALDYLSPKYLNKTLPDLARVASDGVLIFAGYPG 206 (271)
Q Consensus 169 VivSDaLDyLspryLNkTLPeLaRvsadglViF~G~Pg 206 (271)
|+..+++.|+.+..+-+.+.++.|+-..| +++...|.
T Consensus 800 VV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN 836 (950)
T 3htx_A 800 GTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPN 836 (950)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECB
T ss_pred EEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecC
Confidence 99999999999988888899999999999 55554454
No 88
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=94.42 E-value=0.0052 Score=53.17 Aligned_cols=130 Identities=15% Similarity=0.211 Sum_probs=83.1
Q ss_pred ccceeeecCCchhHhHhhhccccccccccccccccchhHHHHHHHhhceeeee-----eecCCCCCCCCCccEEEecccc
Q 024173 101 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVA-----DIKFPLPYRAKSFPLVIVSDAL 175 (271)
Q Consensus 101 M~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvrKGiVRvA-----DIkfpLPYR~kSFslVivSDaL 175 (271)
-.+||-||-.+-.....|.+ ...+..||||.+ +.-..++ ++|+--.. |.--.+|+...+|++|+..++|
T Consensus 108 ~~~VLDiGcG~G~~~~~l~~-~g~~v~gvD~s~--~~~~~a~---~~~~~~~~~~~~~~~~~~l~~~~~~fD~I~~~~vl 181 (416)
T 4e2x_A 108 DPFIVEIGCNDGIMLRTIQE-AGVRHLGFEPSS--GVAAKAR---EKGIRVRTDFFEKATADDVRRTEGPANVIYAANTL 181 (416)
T ss_dssp SCEEEEETCTTTTTHHHHHH-TTCEEEEECCCH--HHHHHHH---TTTCCEECSCCSHHHHHHHHHHHCCEEEEEEESCG
T ss_pred CCEEEEecCCCCHHHHHHHH-cCCcEEEECCCH--HHHHHHH---HcCCCcceeeechhhHhhcccCCCCEEEEEECChH
Confidence 35899999999887776665 456899998853 1222232 22332111 1122356667899999999999
Q ss_pred cccChhhhcccccchhhccc-CceEEEecCCCchhhhHHhhhhc----CCccccccchhHHHHHHHhcccc
Q 024173 176 DYLSPKYLNKTLPDLARVAS-DGVLIFAGYPGQQRAKVAELSKF----GRPAKMRSSSWWIRYFVQTSLEE 241 (271)
Q Consensus 176 DyLspryLNkTLPeLaRvsa-dglViF~G~Pgqqrakvaelskf----grpaK~rsssWW~r~F~qt~LeE 241 (271)
.|+. .+++.|-++.|+-. +|++++. .|.... ..+...| .......+..+|.+.|.++|++.
T Consensus 182 ~h~~--d~~~~l~~~~r~LkpgG~l~i~-~~~~~~--~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aGf~~ 247 (416)
T 4e2x_A 182 CHIP--YVQSVLEGVDALLAPDGVFVFE-DPYLGD--IVAKTSFDQIFDEHFFLFSATSVQGMAQRCGFEL 247 (416)
T ss_dssp GGCT--THHHHHHHHHHHEEEEEEEEEE-EECHHH--HHHHTCGGGCSTTCCEECCHHHHHHHHHHTTEEE
T ss_pred HhcC--CHHHHHHHHHHHcCCCeEEEEE-eCChHH--hhhhcchhhhhhhhhhcCCHHHHHHHHHHcCCEE
Confidence 9995 57888999999765 5566654 443221 1111112 23444567778999998888754
No 89
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=94.34 E-value=0.028 Score=44.29 Aligned_cols=100 Identities=7% Similarity=-0.039 Sum_probs=67.4
Q ss_pred ccceeeecCCchhHhHhhhccccccccccccccccchhHHHHHHHhhc--eeeeeeecC---CCCCCC-CCccEEEeccc
Q 024173 101 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKG--IVRVADIKF---PLPYRA-KSFPLVIVSDA 174 (271)
Q Consensus 101 M~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvrKG--iVRvADIkf---pLPYR~-kSFslVivSDa 174 (271)
-.+||-+|..|......|.+... +..||++.+ ++-..++...... -+..+|+.- +.++.. .+|.+|+.+.+
T Consensus 57 ~~~vLD~GcG~G~~~~~la~~~~-~v~gvD~s~--~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~~~ 133 (245)
T 3ggd_A 57 ELPLIDFACGNGTQTKFLSQFFP-RVIGLDVSK--SALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANIYMRTG 133 (245)
T ss_dssp TSCEEEETCTTSHHHHHHHHHSS-CEEEEESCH--HHHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHHCSCEEEEESS
T ss_pred CCeEEEEcCCCCHHHHHHHHhCC-CEEEEECCH--HHHHHHHHhCcccCceEEECcccccccccccccccCccEEEEcch
Confidence 35799999999998888877655 788887643 2333344333221 234455532 122221 24899999999
Q ss_pred ccccChhhhcccccchhhccc-CceEEEec
Q 024173 175 LDYLSPKYLNKTLPDLARVAS-DGVLIFAG 203 (271)
Q Consensus 175 LDyLspryLNkTLPeLaRvsa-dglViF~G 203 (271)
+.++++..+.+.|-++.|+-. +|.+++.-
T Consensus 134 ~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 163 (245)
T 3ggd_A 134 FHHIPVEKRELLGQSLRILLGKQGAMYLIE 163 (245)
T ss_dssp STTSCGGGHHHHHHHHHHHHTTTCEEEEEE
T ss_pred hhcCCHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 999999989999999999755 56655554
No 90
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=94.16 E-value=0.093 Score=41.28 Aligned_cols=99 Identities=19% Similarity=0.237 Sum_probs=65.8
Q ss_pred ccceeeecCCchhHhHhhhcccccccccccccc--ccchhHHHHHHHhhceeeeeeecCCCCCCCCCccEEEec-ccccc
Q 024173 101 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVS-DALDY 177 (271)
Q Consensus 101 M~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvrKGiVRvADIkfpLPYR~kSFslVivS-DaLDy 177 (271)
-.+||.+|..|......|++. ..+..|||+.+ ++-+..+++..-.+--+..+|+.- +|.. .+|++|+.. +.+.|
T Consensus 42 ~~~vLDlGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~-~~~~-~~fD~v~~~~~~~~~ 118 (252)
T 1wzn_A 42 VRRVLDLACGTGIPTLELAER-GYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLE-IAFK-NEFDAVTMFFSTIMY 118 (252)
T ss_dssp CCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGG-CCCC-SCEEEEEECSSGGGG
T ss_pred CCEEEEeCCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHHhcCCceEEEECChhh-cccC-CCccEEEEcCCchhc
Confidence 468999999999888777765 56788888643 233333333211111244566642 3332 689999976 67788
Q ss_pred cChhhhcccccchhhcc-cCceEEEe
Q 024173 178 LSPKYLNKTLPDLARVA-SDGVLIFA 202 (271)
Q Consensus 178 LspryLNkTLPeLaRvs-adglViF~ 202 (271)
+++..+.+.|.++.|+- .+|++|+.
T Consensus 119 ~~~~~~~~~l~~~~~~L~pgG~li~~ 144 (252)
T 1wzn_A 119 FDEEDLRKLFSKVAEALKPGGVFITD 144 (252)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHcCCCeEEEEe
Confidence 88888888899988864 56666653
No 91
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=94.12 E-value=0.21 Score=41.32 Aligned_cols=138 Identities=11% Similarity=0.039 Sum_probs=84.8
Q ss_pred cccceeeecCCchhHhHhhh--ccccccccccccccccchhHHHHHHHh-hc-----eeeeeeecCCCCCCCCCccEEEe
Q 024173 100 SMHKVLHVGPDTCSVVSTLL--KEEETEAWGVEPYDIEDADARCKSLVH-KG-----IVRVADIKFPLPYRAKSFPLVIV 171 (271)
Q Consensus 100 sM~kVLHVGPdtC~VVs~LL--kEe~tEAWGVEPydied~d~~CKsLvr-KG-----iVRvADIkfpLPYR~kSFslViv 171 (271)
.-.+||-||-.+-.....|. ...+.+..|||+.+ +.-..|+.... .| -+..+|+.- +|+. .+|++|+.
T Consensus 118 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~--~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~-~~fD~v~~ 193 (305)
T 3ocj_A 118 PGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDP--EALDGATRLAAGHALAGQITLHRQDAWK-LDTR-EGYDLLTS 193 (305)
T ss_dssp TTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCH--HHHHHHHHHHTTSTTGGGEEEEECCGGG-CCCC-SCEEEEEC
T ss_pred CCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCH--HHHHHHHHHHHhcCCCCceEEEECchhc-CCcc-CCeEEEEE
Confidence 34579999999988887773 45567888887642 23333443333 22 245567643 4554 89999999
Q ss_pred ccccccc-Chhhhcccccchhhc-ccCceEEEecCCCc-hhhhHH------------h-----hhhc-CC-ccccccchh
Q 024173 172 SDALDYL-SPKYLNKTLPDLARV-ASDGVLIFAGYPGQ-QRAKVA------------E-----LSKF-GR-PAKMRSSSW 229 (271)
Q Consensus 172 SDaLDyL-spryLNkTLPeLaRv-sadglViF~G~Pgq-qrakva------------e-----lskf-gr-paK~rsssW 229 (271)
...+.|+ +|...-+.|-++.|+ ..+|.++++..... ...... + .... +. -..+++...
T Consensus 194 ~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (305)
T 3ocj_A 194 NGLNIYEPDDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTHAQ 273 (305)
T ss_dssp CSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCHHH
T ss_pred CChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhccCCHHH
Confidence 9999998 676655677888875 45677776652211 000000 0 0000 11 114467888
Q ss_pred HHHHHHHhcccc
Q 024173 230 WIRYFVQTSLEE 241 (271)
Q Consensus 230 W~r~F~qt~LeE 241 (271)
|.+.+.++|++.
T Consensus 274 ~~~~l~~aGF~~ 285 (305)
T 3ocj_A 274 TRAQLEEAGFTD 285 (305)
T ss_dssp HHHHHHHTTCEE
T ss_pred HHHHHHHCCCEE
Confidence 888888888865
No 92
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=94.06 E-value=0.12 Score=44.44 Aligned_cols=144 Identities=10% Similarity=0.133 Sum_probs=89.1
Q ss_pred hHHHHHHhc--ccccceeeecCCchhHhHhhhccc-cccccccccccccchhHHHHHHHhhc-eeeeeeecCCCCCCCCC
Q 024173 90 IPILKKAYG--DSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLVHKG-IVRVADIKFPLPYRAKS 165 (271)
Q Consensus 90 iP~LkkaYG--dsM~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEPydied~d~~CKsLvrKG-iVRvADIkfpLPYR~kS 165 (271)
++.+-+.|. ..-.+||.||-.+-.....|++.- +.+..|++. .+.-..++.+ .+ -+...|+.-|+| .
T Consensus 197 ~~~l~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~---~~~~~~a~~~--~~v~~~~~d~~~~~~---~- 267 (372)
T 1fp1_D 197 MKRMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDL---PQVIENAPPL--SGIEHVGGDMFASVP---Q- 267 (372)
T ss_dssp HHHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC---HHHHTTCCCC--TTEEEEECCTTTCCC---C-
T ss_pred HHHHHHHhhccCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh---HHHHHhhhhc--CCCEEEeCCcccCCC---C-
Confidence 355556664 345789999999999988888764 344455452 2222222222 22 234567744665 2
Q ss_pred ccEEEecccccccChhhhcccccchhhcc-cCceEEEec--CCCch-------hhhHHhhhhc-CCccccccchhHHHHH
Q 024173 166 FPLVIVSDALDYLSPKYLNKTLPDLARVA-SDGVLIFAG--YPGQQ-------RAKVAELSKF-GRPAKMRSSSWWIRYF 234 (271)
Q Consensus 166 FslVivSDaLDyLspryLNkTLPeLaRvs-adglViF~G--~Pgqq-------rakvaelskf-grpaK~rsssWW~r~F 234 (271)
|++|+.++.|.+++....-+.|-++.|+- .+|.+++.- .|.+. ....-++.-+ ....+.|+..-|.+.|
T Consensus 268 ~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll 347 (372)
T 1fp1_D 268 GDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESKLVSTLDNLMFITVGGRERTEKQYEKLS 347 (372)
T ss_dssp EEEEEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEECSSCCSSHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHH
T ss_pred CCEEEEecccccCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCccchHHHHHHHhhHHHHhccCCccCCHHHHHHHH
Confidence 99999999999999877678888888874 477777653 23221 1122222111 0113567888889999
Q ss_pred HHhccccc
Q 024173 235 VQTSLEEN 242 (271)
Q Consensus 235 ~qt~LeEn 242 (271)
.++|++.-
T Consensus 348 ~~aGf~~~ 355 (372)
T 1fp1_D 348 KLSGFSKF 355 (372)
T ss_dssp HHTTCSEE
T ss_pred HHCCCceE
Confidence 88888643
No 93
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=93.98 E-value=0.13 Score=44.70 Aligned_cols=140 Identities=19% Similarity=0.135 Sum_probs=86.6
Q ss_pred cccceeeecCCchhHhHhhhcc--cccccccccccc--ccchhHHHHHHHhh--c-------eeeeeeecCC-----CCC
Q 024173 100 SMHKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKSLVHK--G-------IVRVADIKFP-----LPY 161 (271)
Q Consensus 100 sM~kVLHVGPdtC~VVs~LLkE--e~tEAWGVEPyd--ied~d~~CKsLvrK--G-------iVRvADIkfp-----LPY 161 (271)
.-.+||-+|..|-.....|.+. ...+..|||+.+ ++-+..+.+.+-.+ | -+..+|+.-. .|+
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~~ 162 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEGV 162 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCCC
T ss_pred CCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCCC
Confidence 3458999999998877777765 466889998754 33344444433221 3 2345676432 177
Q ss_pred CCCCccEEEecccccccChhhhcccccchhhcc-cCceEEEecCCCchh--hhHHh-hhhcCC-ccccccchhHHHHHHH
Q 024173 162 RAKSFPLVIVSDALDYLSPKYLNKTLPDLARVA-SDGVLIFAGYPGQQR--AKVAE-LSKFGR-PAKMRSSSWWIRYFVQ 236 (271)
Q Consensus 162 R~kSFslVivSDaLDyLspryLNkTLPeLaRvs-adglViF~G~Pgqqr--akvae-lskfgr-paK~rsssWW~r~F~q 236 (271)
...+|++|+...+|.++.. ..+.|.++.|+= .+|.++++....+++ ....+ ..-++. .....+..-|.+.+.+
T Consensus 163 ~~~~fD~V~~~~~l~~~~d--~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 240 (383)
T 4fsd_A 163 PDSSVDIVISNCVCNLSTN--KLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQDPILYGECLGGALYLEDFRRLVAE 240 (383)
T ss_dssp CTTCEEEEEEESCGGGCSC--HHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHHCHHHHHTTCTTCCBHHHHHHHHHH
T ss_pred CCCCEEEEEEccchhcCCC--HHHHHHHHHHHcCCCCEEEEEEeccccccCHhHhhhHHHhhcccccCCCHHHHHHHHHH
Confidence 7899999999999999853 467888888875 467777764222111 11111 111111 1223445678888888
Q ss_pred hcccc
Q 024173 237 TSLEE 241 (271)
Q Consensus 237 t~LeE 241 (271)
+|++.
T Consensus 241 aGF~~ 245 (383)
T 4fsd_A 241 AGFRD 245 (383)
T ss_dssp TTCCC
T ss_pred CCCce
Confidence 88864
No 94
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=93.90 E-value=0.064 Score=44.17 Aligned_cols=149 Identities=16% Similarity=0.196 Sum_probs=82.9
Q ss_pred HhHHHHHHhc--ccccceeeecCCchhH----hHhhhccc-cc--cccccccccccchhHHHHHHHhh--ce--eee---
Q 024173 89 AIPILKKAYG--DSMHKVLHVGPDTCSV----VSTLLKEE-ET--EAWGVEPYDIEDADARCKSLVHK--GI--VRV--- 152 (271)
Q Consensus 89 AiP~LkkaYG--dsM~kVLHVGPdtC~V----Vs~LLkEe-~t--EAWGVEPydied~d~~CKsLvrK--Gi--VRv--- 152 (271)
.+|-+-+..| ..=.+||-||-.|-.+ .+.|+... .. +..||||.+ +.-..++....+ |+ |++
T Consensus 39 ~l~~~l~~~~~~~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~--~ml~~a~~~~~~~~~~~~v~~~~~ 116 (292)
T 2aot_A 39 KLPGIIGRIGDTKSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSA--EQIAKYKELVAKTSNLENVKFAWH 116 (292)
T ss_dssp THHHHSSSTTTTCSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCH--HHHHHHHHHHHTCSSCTTEEEEEE
T ss_pred hchhHHhhccCCCCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCH--HHHHHHHHHHHhccCCCcceEEEE
Confidence 4554433343 2334899999999864 33443321 22 237888764 111223333322 32 222
Q ss_pred -eeec-CC----CCCCCCCccEEEecccccccChhhhcccccchhhc-ccCceEEEec-CCCch-hhhHHhh-hhcCC--
Q 024173 153 -ADIK-FP----LPYRAKSFPLVIVSDALDYLSPKYLNKTLPDLARV-ASDGVLIFAG-YPGQQ-RAKVAEL-SKFGR-- 220 (271)
Q Consensus 153 -ADIk-fp----LPYR~kSFslVivSDaLDyLspryLNkTLPeLaRv-sadglViF~G-~Pgqq-rakvael-skfgr-- 220 (271)
+|+. ++ .|+...+|++|+.+.+|.|+. -+.++|-++.|+ ..+|.++++- .+... .....+. .+++.
T Consensus 117 ~~~~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~--d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~ 194 (292)
T 2aot_A 117 KETSSEYQSRMLEKKELQKWDFIHMIQMLYYVK--DIPATLKFFHSLLGTNAKMLIIVVSGSSGWDKLWKKYGSRFPQDD 194 (292)
T ss_dssp CSCHHHHHHHHHTTTCCCCEEEEEEESCGGGCS--CHHHHHHHHHHTEEEEEEEEEEEECTTSHHHHHHHHHGGGSCCCT
T ss_pred ecchhhhhhhhccccCCCceeEEEEeeeeeecC--CHHHHHHHHHHHcCCCcEEEEEEecCCccHHHHHHHHHHhccCCC
Confidence 2332 22 135678999999999999996 357899999998 6677777653 22111 1111111 12222
Q ss_pred ccccccchhHHHHHHHhcccc
Q 024173 221 PAKMRSSSWWIRYFVQTSLEE 241 (271)
Q Consensus 221 paK~rsssWW~r~F~qt~LeE 241 (271)
.....+..=|.+.+.++|++.
T Consensus 195 ~~~~~~~~~~~~~l~~aGf~~ 215 (292)
T 2aot_A 195 LCQYITSDDLTQMLDNLGLKY 215 (292)
T ss_dssp TCCCCCHHHHHHHHHHHTCCE
T ss_pred cccCCCHHHHHHHHHHCCCce
Confidence 234455666888888888753
No 95
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=93.68 E-value=0.12 Score=39.73 Aligned_cols=99 Identities=11% Similarity=0.059 Sum_probs=60.1
Q ss_pred cccceeeecCCchhHhHhhhcccccccccccccc--ccchhHHHHHHHhhceeeeeeecCCCCCCCCCccEEEecccccc
Q 024173 100 SMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDY 177 (271)
Q Consensus 100 sM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvrKGiVRvADIkfpLPYR~kSFslVivSDaLDy 177 (271)
.-.+||-+|-.+..+...|.+....+..|||..+ ++.+..+++ .--+..+|+.- +| .+|++||....+.+
T Consensus 51 ~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~----~~~~~~~d~~~-~~---~~~D~v~~~~p~~~ 122 (200)
T 1ne2_A 51 GGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCG----GVNFMVADVSE-IS---GKYDTWIMNPPFGS 122 (200)
T ss_dssp BTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCT----TSEEEECCGGG-CC---CCEEEEEECCCC--
T ss_pred CCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcC----CCEEEECcHHH-CC---CCeeEEEECCCchh
Confidence 3458999999999887777766455688888642 223333332 33456677653 45 68999998877777
Q ss_pred cChhhhcccccchhhcccCceEEEecCCCch
Q 024173 178 LSPKYLNKTLPDLARVASDGVLIFAGYPGQQ 208 (271)
Q Consensus 178 LspryLNkTLPeLaRvsadglViF~G~Pgqq 208 (271)
+...-..+.+-++.|+. |+++..-.|+..
T Consensus 123 ~~~~~~~~~l~~~~~~~--g~~~~~~~~~~~ 151 (200)
T 1ne2_A 123 VVKHSDRAFIDKAFETS--MWIYSIGNAKAR 151 (200)
T ss_dssp -----CHHHHHHHHHHE--EEEEEEEEGGGH
T ss_pred ccCchhHHHHHHHHHhc--CcEEEEEcCchH
Confidence 76533334566777776 655555466554
No 96
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=93.09 E-value=0.056 Score=45.04 Aligned_cols=105 Identities=11% Similarity=0.231 Sum_probs=69.6
Q ss_pred ccceeeecCCchhHhHhhhcc-cccccccccccc--ccchhHHHHHHHh-------------------------------
Q 024173 101 MHKVLHVGPDTCSVVSTLLKE-EETEAWGVEPYD--IEDADARCKSLVH------------------------------- 146 (271)
Q Consensus 101 M~kVLHVGPdtC~VVs~LLkE-e~tEAWGVEPyd--ied~d~~CKsLvr------------------------------- 146 (271)
-.+||-||-.+-.+...|.+. ...+..||+..+ |+-+..+.+....
T Consensus 47 ~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (292)
T 3g07_A 47 GRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSCF 126 (292)
T ss_dssp TSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC------------------------------------
T ss_pred CCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccccccccccccc
Confidence 358999999998887777766 356888887643 3334443333221
Q ss_pred ----------------------------hceeeeeeecCC----CCCCCCCccEEEeccccccc----Chhhhcccccch
Q 024173 147 ----------------------------KGIVRVADIKFP----LPYRAKSFPLVIVSDALDYL----SPKYLNKTLPDL 190 (271)
Q Consensus 147 ----------------------------KGiVRvADIkfp----LPYR~kSFslVivSDaLDyL----spryLNkTLPeL 190 (271)
+=-++.+|+.-. +|+...+|++|+...++.|+ ++..+-+.|-++
T Consensus 127 p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~~ 206 (292)
T 3g07_A 127 PASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRRI 206 (292)
T ss_dssp ---------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHHH
Confidence 111233454322 34677899999999999998 666777888888
Q ss_pred hhc-ccCceEEEecCC
Q 024173 191 ARV-ASDGVLIFAGYP 205 (271)
Q Consensus 191 aRv-sadglViF~G~P 205 (271)
.|+ ..+|++|+.-+|
T Consensus 207 ~~~LkpGG~lil~~~~ 222 (292)
T 3g07_A 207 YRHLRPGGILVLEPQP 222 (292)
T ss_dssp HHHEEEEEEEEEECCC
T ss_pred HHHhCCCcEEEEecCC
Confidence 886 557888887554
No 97
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=93.09 E-value=0.058 Score=43.57 Aligned_cols=99 Identities=21% Similarity=0.217 Sum_probs=67.3
Q ss_pred cceeeecCCchhHhHhhhcccccccccccccc--ccchhHHHHH-----HHhhceeeeeeecCCCC---CCCCCccEEEe
Q 024173 102 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKS-----LVHKGIVRVADIKFPLP---YRAKSFPLVIV 171 (271)
Q Consensus 102 ~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKs-----LvrKGiVRvADIkfpLP---YR~kSFslViv 171 (271)
.+||.||..|......|++. ..+..||++.+ ++-+..++.. -..+-.+..+|+. .+| +-..+|++|+.
T Consensus 59 ~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~~~~fD~V~~ 136 (293)
T 3thr_A 59 HRVLDVACGTGVDSIMLVEE-GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWL-TLDKDVPAGDGFDAVIC 136 (293)
T ss_dssp CEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGG-GHHHHSCCTTCEEEEEE
T ss_pred CEEEEecCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChh-hCccccccCCCeEEEEE
Confidence 58999999999888887766 45888888753 2223222211 1112223445542 344 66789999999
Q ss_pred c-ccccccCh-----hhhcccccchhhccc-CceEEEe
Q 024173 172 S-DALDYLSP-----KYLNKTLPDLARVAS-DGVLIFA 202 (271)
Q Consensus 172 S-DaLDyLsp-----ryLNkTLPeLaRvsa-dglViF~ 202 (271)
. +++.|+.. ..+.+.|-++.|+-. +|+++++
T Consensus 137 ~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 174 (293)
T 3thr_A 137 LGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVID 174 (293)
T ss_dssp CTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred cChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 8 99999988 668888999999754 5666654
No 98
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=92.68 E-value=0.15 Score=39.18 Aligned_cols=98 Identities=19% Similarity=0.170 Sum_probs=60.9
Q ss_pred cccceeeecCCchhHhHhhhcccccccccccccc--ccchhHHHHHHHhhc-eeeeeeecCCCCCCCCCccEEEeccccc
Q 024173 100 SMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKG-IVRVADIKFPLPYRAKSFPLVIVSDALD 176 (271)
Q Consensus 100 sM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvrKG-iVRvADIkfpLPYR~kSFslVivSDaLD 176 (271)
.-.+||-+|-.+-.....|.+. ..+.+|||+.+ ++-+..+++.+--.. -+..+|+.-.++ ...+|++|++...+.
T Consensus 77 ~~~~vLdiG~G~G~~~~~la~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~-~~~~~D~i~~~~~~~ 154 (210)
T 3lbf_A 77 PQSRVLEIGTGSGYQTAILAHL-VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQ-ARAPFDAIIVTAAPP 154 (210)
T ss_dssp TTCEEEEECCTTSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCG-GGCCEEEEEESSBCS
T ss_pred CCCEEEEEcCCCCHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCc-cCCCccEEEEccchh
Confidence 3458999999998877777665 67889988763 223333333221111 244566654333 357899999999998
Q ss_pred ccChhhhcccccchhh-cccCceEEEecCCCc
Q 024173 177 YLSPKYLNKTLPDLAR-VASDGVLIFAGYPGQ 207 (271)
Q Consensus 177 yLspryLNkTLPeLaR-vsadglViF~G~Pgq 207 (271)
++.+ ++.| +..+|.++++=.++.
T Consensus 155 ~~~~--------~~~~~L~pgG~lv~~~~~~~ 178 (210)
T 3lbf_A 155 EIPT--------ALMTQLDEGGILVLPVGEEH 178 (210)
T ss_dssp SCCT--------HHHHTEEEEEEEEEEECSSS
T ss_pred hhhH--------HHHHhcccCcEEEEEEcCCc
Confidence 8765 3344 455676666544433
No 99
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=92.53 E-value=0.11 Score=38.11 Aligned_cols=99 Identities=13% Similarity=0.091 Sum_probs=61.1
Q ss_pred cccceeeecCCchhHhHhhhcccccccccccccc--ccchhHHHHHHHh--hceeeeeeecCCCCCCCCCccEEEecccc
Q 024173 100 SMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVH--KGIVRVADIKFPLPYRAKSFPLVIVSDAL 175 (271)
Q Consensus 100 sM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvr--KGiVRvADIkfpLPYR~kSFslVivSDaL 175 (271)
.-.+||.+|..+-.....|++.. .+..|+|+.+ ++-+..+++..-- +--+..+|+.-++|.- .+|++||.+..+
T Consensus 33 ~~~~vldiG~G~G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~D~v~~~~~~ 110 (192)
T 1l3i_A 33 KNDVAVDVGCGTGGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKI-PDIDIAVVGGSG 110 (192)
T ss_dssp TTCEEEEESCTTSHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTS-CCEEEEEESCCT
T ss_pred CCCEEEEECCCCCHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhcccC-CCCCEEEECCch
Confidence 34589999999977777777665 7788887643 3334344332211 1123456665445542 489999988776
Q ss_pred cccChhhhcccccchhhc-ccCceEEEecCC
Q 024173 176 DYLSPKYLNKTLPDLARV-ASDGVLIFAGYP 205 (271)
Q Consensus 176 DyLspryLNkTLPeLaRv-sadglViF~G~P 205 (271)
+. +.+.|.++.|+ ..+|.+++....
T Consensus 111 ~~-----~~~~l~~~~~~l~~gG~l~~~~~~ 136 (192)
T 1l3i_A 111 GE-----LQEILRIIKDKLKPGGRIIVTAIL 136 (192)
T ss_dssp TC-----HHHHHHHHHHTEEEEEEEEEEECB
T ss_pred HH-----HHHHHHHHHHhcCCCcEEEEEecC
Confidence 43 35566666664 556787776643
No 100
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=92.36 E-value=0.15 Score=40.49 Aligned_cols=95 Identities=14% Similarity=0.189 Sum_probs=61.6
Q ss_pred cceeeecCCchhHhHhhhcc-cccccccccccc--ccchhHHHHHHHhhceeeeeeecCC---CCCCCCCccEEEecccc
Q 024173 102 HKVLHVGPDTCSVVSTLLKE-EETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFP---LPYRAKSFPLVIVSDAL 175 (271)
Q Consensus 102 ~kVLHVGPdtC~VVs~LLkE-e~tEAWGVEPyd--ied~d~~CKsLvrKGiVRvADIkfp---LPYR~kSFslVivSDaL 175 (271)
.+||-+|-.|-.....|.+. ...+..|||+.+ ++++..+++.. ..=.+..+|+.-| +|.. .+|++|+ .
T Consensus 76 ~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~-~~v~~~~~d~~~~~~~~~~~-~~~D~v~-~--- 149 (230)
T 1fbn_A 76 SKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER-ENIIPILGDANKPQEYANIV-EKVDVIY-E--- 149 (230)
T ss_dssp CEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC-TTEEEEECCTTCGGGGTTTS-CCEEEEE-E---
T ss_pred CEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC-CCeEEEECCCCCcccccccC-ccEEEEE-E---
Confidence 47999999998888777776 346889998765 35566665544 1112345677644 3443 6899998 2
Q ss_pred cccChhhhcccccchhh-cccCceEEEe
Q 024173 176 DYLSPKYLNKTLPDLAR-VASDGVLIFA 202 (271)
Q Consensus 176 DyLspryLNkTLPeLaR-vsadglViF~ 202 (271)
|.-.|......|.++.| +..+|.++++
T Consensus 150 ~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 150 DVAQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp CCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 33344333444777774 4667888775
No 101
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=92.11 E-value=0.5 Score=36.13 Aligned_cols=93 Identities=15% Similarity=0.131 Sum_probs=58.4
Q ss_pred cceeeecCCchhHhHhhhccccccccccccccccchhHHHHHHHhhceeeeeeecCCCCCCCCCccEEEecccccccChh
Q 024173 102 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYLSPK 181 (271)
Q Consensus 102 ~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvrKGiVRvADIkfpLPYR~kSFslVivSDaLDyLspr 181 (271)
.+||-+|-.|..+...|.+.. +..|||..+-- ++. ..+--+..+|+.-++| ..+|++|+..-.+-..+++
T Consensus 25 ~~vLD~GcG~G~~~~~l~~~~--~v~gvD~s~~~-----~~~-~~~~~~~~~d~~~~~~--~~~fD~i~~n~~~~~~~~~ 94 (170)
T 3q87_B 25 KIVLDLGTSTGVITEQLRKRN--TVVSTDLNIRA-----LES-HRGGNLVRADLLCSIN--QESVDVVVFNPPYVPDTDD 94 (170)
T ss_dssp CEEEEETCTTCHHHHHHTTTS--EEEEEESCHHH-----HHT-CSSSCEEECSTTTTBC--GGGCSEEEECCCCBTTCCC
T ss_pred CeEEEeccCccHHHHHHHhcC--cEEEEECCHHH-----Hhc-ccCCeEEECChhhhcc--cCCCCEEEECCCCccCCcc
Confidence 489999999998888888766 88888764310 111 2233466788866444 5899999986444333322
Q ss_pred -------hhcccccchhhcccCceEEEecC
Q 024173 182 -------YLNKTLPDLARVASDGVLIFAGY 204 (271)
Q Consensus 182 -------yLNkTLPeLaRvsadglViF~G~ 204 (271)
-.-..+.++.|...+|.+++...
T Consensus 95 ~~~~~~~~~~~~~~~~~~~lpgG~l~~~~~ 124 (170)
T 3q87_B 95 PIIGGGYLGREVIDRFVDAVTVGMLYLLVI 124 (170)
T ss_dssp TTTBCCGGGCHHHHHHHHHCCSSEEEEEEE
T ss_pred ccccCCcchHHHHHHHHhhCCCCEEEEEEe
Confidence 11223444444448888888663
No 102
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=91.94 E-value=0.25 Score=37.67 Aligned_cols=114 Identities=11% Similarity=0.065 Sum_probs=71.2
Q ss_pred HhHHHHHHhcccccceeeecCCchhHhHhhhcccccccccccccc--ccchhHHHHHHHh-hceeeeeeecCCCC-CCCC
Q 024173 89 AIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVH-KGIVRVADIKFPLP-YRAK 164 (271)
Q Consensus 89 AiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvr-KGiVRvADIkfpLP-YR~k 164 (271)
.+..|.......=.+||-+|-.|-.+...+++....+..|||..+ ++-+..+.+..-- +--+..+|+.-.++ +...
T Consensus 33 l~~~l~~~~~~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 112 (189)
T 3p9n_A 33 LFNIVTARRDLTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTS 112 (189)
T ss_dssp HHHHHHHHSCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSS
T ss_pred HHHHHHhccCCCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCC
Confidence 344554432233468999999998877778877667889988653 3444444433210 11245566543222 3367
Q ss_pred CccEEEecccccccChhhhcccccchhh---cccCceEEEec
Q 024173 165 SFPLVIVSDALDYLSPKYLNKTLPDLAR---VASDGVLIFAG 203 (271)
Q Consensus 165 SFslVivSDaLDyLspryLNkTLPeLaR---vsadglViF~G 203 (271)
+|++|+...... .....+.+.+.++.| +..+|++++.-
T Consensus 113 ~fD~i~~~~p~~-~~~~~~~~~l~~~~~~~~L~pgG~l~~~~ 153 (189)
T 3p9n_A 113 PVDLVLADPPYN-VDSADVDAILAALGTNGWTREGTVAVVER 153 (189)
T ss_dssp CCSEEEECCCTT-SCHHHHHHHHHHHHHSSSCCTTCEEEEEE
T ss_pred CccEEEECCCCC-cchhhHHHHHHHHHhcCccCCCeEEEEEe
Confidence 899887754422 224677888889987 77888888854
No 103
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=91.86 E-value=0.4 Score=38.29 Aligned_cols=93 Identities=23% Similarity=0.217 Sum_probs=59.6
Q ss_pred ccccceeeecCCchhHhHhhhcc-ccccccccccccccchhHHHHHHHhhceeeeeeecCCCCCCCCCccEEEecccccc
Q 024173 99 DSMHKVLHVGPDTCSVVSTLLKE-EETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDY 177 (271)
Q Consensus 99 dsM~kVLHVGPdtC~VVs~LLkE-e~tEAWGVEPydied~d~~CKsLvrKGiVRvADIkfpLPYR~kSFslVivSDaLDy 177 (271)
..-.+||-||..+-.....|++. ...+..|||+.+ +.-..++....+--+.++|+. .+|+...+|++||..++.
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~--~~~~~a~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~~~-- 158 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSK--VAIKAAAKRYPQVTFCVASSH-RLPFSDTSMDAIIRIYAP-- 158 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCH--HHHHHHHHHCTTSEEEECCTT-SCSBCTTCEEEEEEESCC--
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCH--HHHHHHHHhCCCcEEEEcchh-hCCCCCCceeEEEEeCCh--
Confidence 34458999999997766666665 256888988753 122222322222345667764 467778899999987652
Q ss_pred cChhhhcccccchhhccc-CceEEEec
Q 024173 178 LSPKYLNKTLPDLARVAS-DGVLIFAG 203 (271)
Q Consensus 178 LspryLNkTLPeLaRvsa-dglViF~G 203 (271)
..+.++.|+-. +|.+++..
T Consensus 159 -------~~l~~~~~~L~pgG~l~~~~ 178 (269)
T 1p91_A 159 -------CKAEELARVVKPGGWVITAT 178 (269)
T ss_dssp -------CCHHHHHHHEEEEEEEEEEE
T ss_pred -------hhHHHHHHhcCCCcEEEEEE
Confidence 34677777655 56666554
No 104
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=91.57 E-value=0.11 Score=42.34 Aligned_cols=87 Identities=13% Similarity=0.048 Sum_probs=58.0
Q ss_pred eeeeeecCCCCCC---CCCccEEEecccccccCh--hhhcccccchhhc-ccCceEEEecCCCchhhhHHhhhhcCC--c
Q 024173 150 VRVADIKFPLPYR---AKSFPLVIVSDALDYLSP--KYLNKTLPDLARV-ASDGVLIFAGYPGQQRAKVAELSKFGR--P 221 (271)
Q Consensus 150 VRvADIkfpLPYR---~kSFslVivSDaLDyLsp--ryLNkTLPeLaRv-sadglViF~G~Pgqqrakvaelskfgr--p 221 (271)
+..+||.-+.|+- ..+|++|+.+-+|+|+.| .-+-+.|.++.|+ -..|.+||++.-++..- ..|. .
T Consensus 138 ~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~~------~~g~~~~ 211 (263)
T 2a14_A 138 VLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPSY------MVGKREF 211 (263)
T ss_dssp EEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEE------EETTEEE
T ss_pred EEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCccc------eeCCeEe
Confidence 6688988765643 458999999999999754 3455688888884 56788999873322110 0121 1
Q ss_pred cc-cccchhHHHHHHHhccccc
Q 024173 222 AK-MRSSSWWIRYFVQTSLEEN 242 (271)
Q Consensus 222 aK-~rsssWW~r~F~qt~LeEn 242 (271)
.. .-+...|.+.+.++|++..
T Consensus 212 ~~~~~~~~~l~~~l~~aGF~i~ 233 (263)
T 2a14_A 212 SCVALEKGEVEQAVLDAGFDIE 233 (263)
T ss_dssp ECCCCCHHHHHHHHHHTTEEEE
T ss_pred eccccCHHHHHHHHHHCCCEEE
Confidence 11 1256788999999997643
No 105
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=91.56 E-value=0.24 Score=40.62 Aligned_cols=96 Identities=17% Similarity=0.096 Sum_probs=60.2
Q ss_pred cceeeecCCchhHhHhhhcc--cccccccccccc--ccchhHHHHHH--HhhceeeeeeecCCCCCCCCCccEEEecccc
Q 024173 102 HKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKSL--VHKGIVRVADIKFPLPYRAKSFPLVIVSDAL 175 (271)
Q Consensus 102 ~kVLHVGPdtC~VVs~LLkE--e~tEAWGVEPyd--ied~d~~CKsL--vrKGiVRvADIkfpLPYR~kSFslVivSDaL 175 (271)
.+||-+|-.+-.....|++. ...+..|||+.+ ++.+..+++.. ...=-+..+|+.-++ ...+|++||. |.-
T Consensus 112 ~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~--~~~~fD~Vi~-~~~ 188 (275)
T 1yb2_A 112 MDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFI--SDQMYDAVIA-DIP 188 (275)
T ss_dssp CEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCC--CSCCEEEEEE-CCS
T ss_pred CEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhccC--cCCCccEEEE-cCc
Confidence 58999999988887777765 356888888643 33344444322 011123456665544 4578999987 322
Q ss_pred cccChhhhcccccchhh-cccCceEEEecCCC
Q 024173 176 DYLSPKYLNKTLPDLAR-VASDGVLIFAGYPG 206 (271)
Q Consensus 176 DyLspryLNkTLPeLaR-vsadglViF~G~Pg 206 (271)
...+.|.++.| +..+|.++++..+-
T Consensus 189 ------~~~~~l~~~~~~LkpgG~l~i~~~~~ 214 (275)
T 1yb2_A 189 ------DPWNHVQKIASMMKPGSVATFYLPNF 214 (275)
T ss_dssp ------CGGGSHHHHHHTEEEEEEEEEEESSH
T ss_pred ------CHHHHHHHHHHHcCCCCEEEEEeCCH
Confidence 22466777777 56778888877544
No 106
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=91.56 E-value=0.31 Score=38.35 Aligned_cols=125 Identities=19% Similarity=0.120 Sum_probs=79.4
Q ss_pred cceeeecCCchhHhHhhhccccccccccccccccchhHHHHHHHh-----------------hceeeeeeecCCCCCCC-
Q 024173 102 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVH-----------------KGIVRVADIKFPLPYRA- 163 (271)
Q Consensus 102 ~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvr-----------------KGiVRvADIkfpLPYR~- 163 (271)
.+||-+|=.|=.....|.+. ..+..||+..+- +=..++.-.+ +--+.++|+ +-||+..
T Consensus 24 ~~vLD~GCG~G~~~~~la~~-g~~V~gvD~S~~--~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~-~~l~~~~~ 99 (203)
T 1pjz_A 24 ARVLVPLCGKSQDMSWLSGQ-GYHVVGAELSEA--AVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDF-FALTARDI 99 (203)
T ss_dssp CEEEETTTCCSHHHHHHHHH-CCEEEEEEECHH--HHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECC-SSSTHHHH
T ss_pred CEEEEeCCCCcHhHHHHHHC-CCeEEEEeCCHH--HHHHHHHHccCCcccccccccccccCCccEEEECcc-ccCCcccC
Confidence 47999998888777777665 557888876541 2222332211 112456777 3567654
Q ss_pred CCccEEEecccccccChhhhcccccchhhcccC-ce--EEEecCCCchhhhHHhhhhcCCccccccchhHHHHHHHhccc
Q 024173 164 KSFPLVIVSDALDYLSPKYLNKTLPDLARVASD-GV--LIFAGYPGQQRAKVAELSKFGRPAKMRSSSWWIRYFVQTSLE 240 (271)
Q Consensus 164 kSFslVivSDaLDyLspryLNkTLPeLaRvsad-gl--ViF~G~PgqqrakvaelskfgrpaK~rsssWW~r~F~qt~Le 240 (271)
.+|++|+...++.++.+.-..+.+-++.|+-.. |. ++...++ +. ...|.| -..+...+.+.|.+ |++
T Consensus 100 ~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~~~~~-~~-------~~~~~~-~~~~~~el~~~~~~-gf~ 169 (203)
T 1pjz_A 100 GHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITLEYD-QA-------LLEGPP-FSVPQTWLHRVMSG-NWE 169 (203)
T ss_dssp HSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEESSC-SS-------SSSSCC-CCCCHHHHHHTSCS-SEE
T ss_pred CCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEEecC-cc-------ccCCCC-CCCCHHHHHHHhcC-CcE
Confidence 799999999999999987777788899997655 54 3333344 21 112333 23466777777776 653
No 107
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=91.47 E-value=0.32 Score=36.56 Aligned_cols=101 Identities=14% Similarity=0.172 Sum_probs=58.5
Q ss_pred cceeeecCCchhHhHhhhcccccccccccccc--ccchhHHHHHHHhhce--e--eeeeecCCCCCCCCCccEEEecccc
Q 024173 102 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGI--V--RVADIKFPLPYRAKSFPLVIVSDAL 175 (271)
Q Consensus 102 ~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvrKGi--V--RvADIkfpLPYR~kSFslVivSDaL 175 (271)
.+||-+|-.|-.....|.+. ..+.+|||..+ ++-+..+++. .|+ | ..+|..--.++-..+|++|+.+ +
T Consensus 24 ~~vLDiGcG~G~~~~~la~~-~~~v~~vD~s~~~l~~a~~~~~~---~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~--~ 97 (185)
T 3mti_A 24 SIVVDATMGNGNDTAFLAGL-SKKVYAFDVQEQALGKTSQRLSD---LGIENTELILDGHENLDHYVREPIRAAIFN--L 97 (185)
T ss_dssp CEEEESCCTTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHH---HTCCCEEEEESCGGGGGGTCCSCEEEEEEE--E
T ss_pred CEEEEEcCCCCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHH---cCCCcEEEEeCcHHHHHhhccCCcCEEEEe--C
Confidence 57999999998777777766 78889988653 3444444443 233 2 2244432222447899999654 2
Q ss_pred cccCh---------hhhcccccchhh-cccCceEEEecCCCch
Q 024173 176 DYLSP---------KYLNKTLPDLAR-VASDGVLIFAGYPGQQ 208 (271)
Q Consensus 176 DyLsp---------ryLNkTLPeLaR-vsadglViF~G~Pgqq 208 (271)
.|+.+ .-.-+.|.++.| +..+|.++++.++|+.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 140 (185)
T 3mti_A 98 GYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYGHD 140 (185)
T ss_dssp C-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC----
T ss_pred CCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCCCC
Confidence 44432 222344566655 4668888888887653
No 108
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=91.01 E-value=0.28 Score=38.21 Aligned_cols=94 Identities=16% Similarity=0.131 Sum_probs=59.5
Q ss_pred ccceeeecCCchhHhHhhhccccccccccccccccchhHHHHHHHhh-c--eeeeeeecCCCCCCCCCccEEEecccccc
Q 024173 101 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHK-G--IVRVADIKFPLPYRAKSFPLVIVSDALDY 177 (271)
Q Consensus 101 M~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvrK-G--iVRvADIkfpLPYR~kSFslVivSDaLDy 177 (271)
-.+||.||..+-.....|.+.. .+..|||+.+ +.-..++..... | -+..+|+.-++| ...+|++||+...+.+
T Consensus 71 ~~~vLdiG~G~G~~~~~l~~~~-~~v~~vD~~~--~~~~~a~~~~~~~~~v~~~~~d~~~~~~-~~~~fD~v~~~~~~~~ 146 (231)
T 1vbf_A 71 GQKVLEIGTGIGYYTALIAEIV-DKVVSVEINE--KMYNYASKLLSYYNNIKLILGDGTLGYE-EEKPYDRVVVWATAPT 146 (231)
T ss_dssp TCEEEEECCTTSHHHHHHHHHS-SEEEEEESCH--HHHHHHHHHHTTCSSEEEEESCGGGCCG-GGCCEEEEEESSBBSS
T ss_pred CCEEEEEcCCCCHHHHHHHHHc-CEEEEEeCCH--HHHHHHHHHHhhcCCeEEEECCcccccc-cCCCccEEEECCcHHH
Confidence 3489999999977766666554 7788887642 222223332221 2 244567655444 4578999999999988
Q ss_pred cChhhhcccccchhh-cccCceEEEecCCC
Q 024173 178 LSPKYLNKTLPDLAR-VASDGVLIFAGYPG 206 (271)
Q Consensus 178 LspryLNkTLPeLaR-vsadglViF~G~Pg 206 (271)
+.. ++.| +..+|.++++-.+.
T Consensus 147 ~~~--------~~~~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 147 LLC--------KPYEQLKEGGIMILPIGVG 168 (231)
T ss_dssp CCH--------HHHHTEEEEEEEEEEECSS
T ss_pred HHH--------HHHHHcCCCcEEEEEEcCC
Confidence 764 3444 35577777765443
No 109
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=90.65 E-value=0.22 Score=39.39 Aligned_cols=104 Identities=17% Similarity=0.146 Sum_probs=62.6
Q ss_pred cccceeeecCCchhHhHhhhccccccccccccccccchhHHHHHHHhh-c---eeeeeeecCC-CCCCCCCccEEEe-cc
Q 024173 100 SMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHK-G---IVRVADIKFP-LPYRAKSFPLVIV-SD 173 (271)
Q Consensus 100 sM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvrK-G---iVRvADIkfp-LPYR~kSFslViv-SD 173 (271)
.-.+||-||..|-.....|.+....+.+|||+.+ +.-..++...++ | -+..+|+.-. .|+...+|++|+. +.
T Consensus 60 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~--~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~ 137 (236)
T 1zx0_A 60 KGGRVLEVGFGMAIAASKVQEAPIDEHWIIECND--GVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTY 137 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCH--HHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCC
T ss_pred CCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCH--HHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCceEEEEECCc
Confidence 3458999999999888888665556889998764 222223332221 2 2233444321 1666789999987 55
Q ss_pred cc--cccChhhhcccccchhhcc-cCceEEEecCC
Q 024173 174 AL--DYLSPKYLNKTLPDLARVA-SDGVLIFAGYP 205 (271)
Q Consensus 174 aL--DyLspryLNkTLPeLaRvs-adglViF~G~P 205 (271)
.+ .......+.+.|.++.|+= .+|+++|.-..
T Consensus 138 ~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~ 172 (236)
T 1zx0_A 138 PLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLT 172 (236)
T ss_dssp CCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHH
T ss_pred ccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEecC
Confidence 43 1222223335578888864 57777776543
No 110
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=89.92 E-value=0.36 Score=41.06 Aligned_cols=132 Identities=15% Similarity=0.136 Sum_probs=82.7
Q ss_pred cccceeeecCCchhHhHhhhccc-cccccccccccccchhHHHHHHHhhce-eeeeeecCCCCCCCCCccEEEecccccc
Q 024173 100 SMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLVHKGI-VRVADIKFPLPYRAKSFPLVIVSDALDY 177 (271)
Q Consensus 100 sM~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEPydied~d~~CKsLvrKGi-VRvADIkfpLPYR~kSFslVivSDaLDy 177 (271)
...+||.||..+-.....|++.- ..+..|++. .++-...+.+ .++ +...|+--|+| +|++|+.++.|.+
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~---~~~~~~a~~~--~~v~~~~~d~~~~~~----~~D~v~~~~vlh~ 263 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ---PQVVGNLTGN--ENLNFVGGDMFKSIP----SADAVLLKWVLHD 263 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC---HHHHSSCCCC--SSEEEEECCTTTCCC----CCSEEEEESCGGG
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc---HHHHhhcccC--CCcEEEeCccCCCCC----CceEEEEcccccC
Confidence 44689999999999988888764 334555543 2222222221 231 23456644666 4999999999999
Q ss_pred cChhhhcccccchhhccc----CceEEEec--CCCch-------hhhHHhhh---hcCCccccccchhHHHHHHHhcccc
Q 024173 178 LSPKYLNKTLPDLARVAS----DGVLIFAG--YPGQQ-------RAKVAELS---KFGRPAKMRSSSWWIRYFVQTSLEE 241 (271)
Q Consensus 178 LspryLNkTLPeLaRvsa----dglViF~G--~Pgqq-------rakvaels---kfgrpaK~rsssWW~r~F~qt~LeE 241 (271)
++....-+.|-++.|+-. +|.+++.- .|.+. ....-++. -+| .+.|+..-|.+.|.++|++.
T Consensus 264 ~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~--g~~~t~~e~~~ll~~aGf~~ 341 (358)
T 1zg3_A 264 WNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVMLTMFL--GKERTKQEWEKLIYDAGFSS 341 (358)
T ss_dssp SCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEECTTCSCHHHHHHHHHHHHHHHHHHS--CCCEEHHHHHHHHHHTTCCE
T ss_pred CCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeccCCCCccchhhhHHHhhCHHHhccCC--CCCCCHHHHHHHHHHcCCCe
Confidence 988766678888888644 68666643 12211 11111221 122 35688889999999999874
Q ss_pred c
Q 024173 242 N 242 (271)
Q Consensus 242 n 242 (271)
-
T Consensus 342 ~ 342 (358)
T 1zg3_A 342 Y 342 (358)
T ss_dssp E
T ss_pred e
Confidence 3
No 111
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=89.66 E-value=0.29 Score=41.67 Aligned_cols=119 Identities=19% Similarity=0.198 Sum_probs=65.4
Q ss_pred HHHHhHhHHHHHHhcccccceeeecCCchhHhHhhhcc-cccccccccccc--ccchhHHHHHH---H--hhceeeeeee
Q 024173 84 SEIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKE-EETEAWGVEPYD--IEDADARCKSL---V--HKGIVRVADI 155 (271)
Q Consensus 84 ~eV~~AiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkE-e~tEAWGVEPyd--ied~d~~CKsL---v--rKGiVRvADI 155 (271)
.|.+..+|.+.. ..-.+||.+|-.+..+...+++. ...+..+||..+ ++-+..+.+.+ . .+=-+..+|.
T Consensus 77 ~e~l~~~~l~~~---~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~ 153 (296)
T 1inl_A 77 HEMLAHVPMFLH---PNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANG 153 (296)
T ss_dssp HHHHHHHHHHHS---SSCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCH
T ss_pred HHHHhHHHHhcC---CCCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcH
Confidence 355555665542 22368999999999999999987 346777776532 22233333221 0 0112445665
Q ss_pred cCCCCCCCCCccEEEecccccc-cChh---hhcccccchhh-cccCceEEEec-CCC
Q 024173 156 KFPLPYRAKSFPLVIVSDALDY-LSPK---YLNKTLPDLAR-VASDGVLIFAG-YPG 206 (271)
Q Consensus 156 kfpLPYR~kSFslVivSDaLDy-Lspr---yLNkTLPeLaR-vsadglViF~G-~Pg 206 (271)
.-.++....+|++||+ |+.|. ..|. |.-..+.++.| +..+|++++.. .|-
T Consensus 154 ~~~l~~~~~~fD~Ii~-d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~ 209 (296)
T 1inl_A 154 AEYVRKFKNEFDVIII-DSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETEDPF 209 (296)
T ss_dssp HHHGGGCSSCEEEEEE-EC----------CCSHHHHHHHHHHEEEEEEEEEECCCTT
T ss_pred HHHHhhCCCCceEEEE-cCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEccCcc
Confidence 4345555678999885 66554 3221 11233344444 56788888864 453
No 112
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=89.46 E-value=0.34 Score=39.75 Aligned_cols=96 Identities=20% Similarity=0.272 Sum_probs=60.2
Q ss_pred ccceeeecCCchhHhHhhhcccccccccccccc--ccchhHHHHHHHhhce-e--eeeeecCCCCCCCCCccEEEecccc
Q 024173 101 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGI-V--RVADIKFPLPYRAKSFPLVIVSDAL 175 (271)
Q Consensus 101 M~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvrKGi-V--RvADIkfpLPYR~kSFslVivSDaL 175 (271)
-.+||-+|-.+-.....+.+... +..|||+.+ ++.+..|++ +.|+ + ..+|+.-++| ..+|++|+..-..
T Consensus 121 ~~~VLDiGcG~G~l~~~la~~g~-~v~gvDi~~~~v~~a~~n~~---~~~~~v~~~~~d~~~~~~--~~~fD~Vv~n~~~ 194 (254)
T 2nxc_A 121 GDKVLDLGTGSGVLAIAAEKLGG-KALGVDIDPMVLPQAEANAK---RNGVRPRFLEGSLEAALP--FGPFDLLVANLYA 194 (254)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTC-EEEEEESCGGGHHHHHHHHH---HTTCCCEEEESCHHHHGG--GCCEEEEEEECCH
T ss_pred CCEEEEecCCCcHHHHHHHHhCC-eEEEEECCHHHHHHHHHHHH---HcCCcEEEEECChhhcCc--CCCCCEEEECCcH
Confidence 46899999999766656665544 888887543 333444433 2343 3 3345543343 5689999875333
Q ss_pred cccChhhhcccccchhhc-ccCceEEEecCCCc
Q 024173 176 DYLSPKYLNKTLPDLARV-ASDGVLIFAGYPGQ 207 (271)
Q Consensus 176 DyLspryLNkTLPeLaRv-sadglViF~G~Pgq 207 (271)
+ .+...++++.|+ ..+|.++++|....
T Consensus 195 ~-----~~~~~l~~~~~~LkpgG~lils~~~~~ 222 (254)
T 2nxc_A 195 E-----LHAALAPRYREALVPGGRALLTGILKD 222 (254)
T ss_dssp H-----HHHHHHHHHHHHEEEEEEEEEEEEEGG
T ss_pred H-----HHHHHHHHHHHHcCCCCEEEEEeeccC
Confidence 2 356778888774 56789999885443
No 113
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=89.37 E-value=0.078 Score=39.68 Aligned_cols=104 Identities=11% Similarity=0.032 Sum_probs=65.0
Q ss_pred ccceeeecCCchhHhHhhhcccccccccccccc--ccchhHHHHHHH--hhceeeeeeecCCCCCCCCCccEEEeccccc
Q 024173 101 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV--HKGIVRVADIKFPLPYRAKSFPLVIVSDALD 176 (271)
Q Consensus 101 M~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLv--rKGiVRvADIkfpLPYR~kSFslVivSDaLD 176 (271)
-.+||-+|-.+......|++....+.+|||+.+ ++.+..+++..- .+--+..+|+.-.+|.-..+|++|+......
T Consensus 32 ~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~~~~~ 111 (177)
T 2esr_A 32 GGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLDPPYA 111 (177)
T ss_dssp SCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEECCSSH
T ss_pred CCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEECCCCC
Confidence 358999999999988888887667899998653 333444443321 1123456777555565556799988653321
Q ss_pred ccChhhhcccccchh--h-cccCceEEEecCCCc
Q 024173 177 YLSPKYLNKTLPDLA--R-VASDGVLIFAGYPGQ 207 (271)
Q Consensus 177 yLspryLNkTLPeLa--R-vsadglViF~G~Pgq 207 (271)
.....+.+..++ | +..+|++++.-.+.+
T Consensus 112 ---~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 142 (177)
T 2esr_A 112 ---KETIVATIEALAAKNLLSEQVMVVCETDKTV 142 (177)
T ss_dssp ---HHHHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred ---cchHHHHHHHHHhCCCcCCCcEEEEEECCcc
Confidence 123344455553 3 577888888765444
No 114
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=89.02 E-value=0.38 Score=36.13 Aligned_cols=81 Identities=21% Similarity=0.299 Sum_probs=56.4
Q ss_pred ceeeeeeecCCCCC---CCCCccEEEecccccccChhhhcccccchhhcc-cCceEEEecCCCchhhhHHhhhhcCCccc
Q 024173 148 GIVRVADIKFPLPY---RAKSFPLVIVSDALDYLSPKYLNKTLPDLARVA-SDGVLIFAGYPGQQRAKVAELSKFGRPAK 223 (271)
Q Consensus 148 GiVRvADIkfpLPY---R~kSFslVivSDaLDyLspryLNkTLPeLaRvs-adglViF~G~PgqqrakvaelskfgrpaK 223 (271)
--+..+|+. .+|+ ...+|++|+.+.+|.|+++ .+.+.|.++.|+= .+|.++|. .|-.. ..+.+.-
T Consensus 44 ~~~~~~d~~-~~~~~~~~~~~fD~V~~~~~l~~~~~-~~~~~l~~~~r~LkpgG~l~~~-~~~~~--------~~~~~~~ 112 (176)
T 2ld4_A 44 GRVSVENIK-QLLQSAHKESSFDIILSGLVPGSTTL-HSAEILAEIARILRPGGCLFLK-EPVET--------AVDNNSK 112 (176)
T ss_dssp SEEEEEEGG-GGGGGCCCSSCEEEEEECCSTTCCCC-CCHHHHHHHHHHEEEEEEEEEE-EEEES--------SSCSSSS
T ss_pred cEEEEechh-cCccccCCCCCEeEEEECChhhhccc-CHHHHHHHHHHHCCCCEEEEEE-ccccc--------ccccccc
Confidence 345678886 3444 7899999999999999933 3578899999974 56777774 23111 1122334
Q ss_pred cccchhHHHHHHHhcc
Q 024173 224 MRSSSWWIRYFVQTSL 239 (271)
Q Consensus 224 ~rsssWW~r~F~qt~L 239 (271)
.++...|.+.+.++|+
T Consensus 113 ~~~~~~~~~~l~~aGf 128 (176)
T 2ld4_A 113 VKTASKLCSALTLSGL 128 (176)
T ss_dssp SCCHHHHHHHHHHTTC
T ss_pred cCCHHHHHHHHHHCCC
Confidence 4567789999999998
No 115
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=88.91 E-value=0.24 Score=42.98 Aligned_cols=117 Identities=18% Similarity=0.181 Sum_probs=67.1
Q ss_pred HHHHhHhHHHHHHhcccccceeeecCCchhHhHhhhccc-cccccccccccccchhHHHHHHHh---hce------eeee
Q 024173 84 SEIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLVH---KGI------VRVA 153 (271)
Q Consensus 84 ~eV~~AiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEPydied~d~~CKsLvr---KGi------VRvA 153 (271)
.|.+..+|.+.. ..-.+||.+|-.+..+...+++.. ..+..+||..+ ++-..|+.-.. .|+ +..+
T Consensus 103 ~e~l~~~~l~~~---~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~--~~l~~ar~~~~~~~~~~~~~~v~~~~~ 177 (321)
T 2pt6_A 103 HEMMTHVPMTVS---KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDE--TVIEVSKIYFKNISCGYEDKRVNVFIE 177 (321)
T ss_dssp HHHHHHHHHHHS---SSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCH--HHHHHHHHHCTTTSGGGGSTTEEEEES
T ss_pred HHHHHHHHHhcC---CCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCH--HHHHHHHHHHHhhccccCCCcEEEEEc
Confidence 355555565432 233689999999999999999873 45677776532 12223333222 122 4556
Q ss_pred eecCCCCCCCCCccEEEecccccccChh-hh--cccccchhh-cccCceEEEe-cCCC
Q 024173 154 DIKFPLPYRAKSFPLVIVSDALDYLSPK-YL--NKTLPDLAR-VASDGVLIFA-GYPG 206 (271)
Q Consensus 154 DIkfpLPYR~kSFslVivSDaLDyLspr-yL--NkTLPeLaR-vsadglViF~-G~Pg 206 (271)
|+.-.++....+|++||+ |..|...|. .| ...+.++.| +..+|++++. +.|-
T Consensus 178 D~~~~l~~~~~~fDvIi~-d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~ 234 (321)
T 2pt6_A 178 DASKFLENVTNTYDVIIV-DSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESLW 234 (321)
T ss_dssp CHHHHHHHCCSCEEEEEE-ECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECCTT
T ss_pred cHHHHHhhcCCCceEEEE-CCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcc
Confidence 654334434678998885 665544332 12 233445544 4678888885 3453
No 116
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=88.89 E-value=0.19 Score=42.23 Aligned_cols=115 Identities=21% Similarity=0.238 Sum_probs=64.4
Q ss_pred HHHhHhHHHHHHhcccccceeeecCCchhHhHhhhccccccccccccccccchhHHHHHHHhh--c-------------e
Q 024173 85 EIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHK--G-------------I 149 (271)
Q Consensus 85 eV~~AiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvrK--G-------------i 149 (271)
|.+..+|++.- ..-.+||.+|-.+..+...+++....+..|||.-+ ++-..|+.-.+- | -
T Consensus 63 e~l~~~~l~~~---~~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~--~~i~~ar~~~~~~~~l~~~~~~~~~~~v~ 137 (281)
T 1mjf_A 63 EPLVHPAMLAH---PKPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDE--DVIMVSKDLIKIDNGLLEAMLNGKHEKAK 137 (281)
T ss_dssp HHHHHHHHHHS---SCCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCH--HHHHHHHHHTCTTTTHHHHHHTTCCSSEE
T ss_pred HHHHHHHHhhC---CCCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCH--HHHHHHHHHHhhccccccccccCCCCcEE
Confidence 44444455431 23468999999999999999987556788887542 122223322111 2 2
Q ss_pred eeeeeecCCCCCCCCCccEEEecccccccCh-hhh--cccccchhh-cccCceEEEe-cCCC
Q 024173 150 VRVADIKFPLPYRAKSFPLVIVSDALDYLSP-KYL--NKTLPDLAR-VASDGVLIFA-GYPG 206 (271)
Q Consensus 150 VRvADIkfpLPYR~kSFslVivSDaLDyLsp-ryL--NkTLPeLaR-vsadglViF~-G~Pg 206 (271)
+..+|..--++- ..+|++||+ |+.+...| ..| ...+-++.| +..+|++++. +.|-
T Consensus 138 ~~~~D~~~~l~~-~~~fD~Ii~-d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~ 197 (281)
T 1mjf_A 138 LTIGDGFEFIKN-NRGFDVIIA-DSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAGSVY 197 (281)
T ss_dssp EEESCHHHHHHH-CCCEEEEEE-ECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEEEETT
T ss_pred EEECchHHHhcc-cCCeeEEEE-CCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcc
Confidence 445665322333 678999885 77654433 211 223444444 4678888774 5663
No 117
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=88.84 E-value=0.14 Score=40.33 Aligned_cols=104 Identities=13% Similarity=0.053 Sum_probs=68.2
Q ss_pred cceeeecCCchhHhHhhhcccccccccccccc--ccchhHHHHHHH-hhceeeeeeecCCCCCCCCCccEEEeccccccc
Q 024173 102 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV-HKGIVRVADIKFPLPYRAKSFPLVIVSDALDYL 178 (271)
Q Consensus 102 ~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLv-rKGiVRvADIkfpLPYR~kSFslVivSDaLDyL 178 (271)
.+||-+|-.|-.+.-.+++....+..|||..+ ++-+..|++..- .+--+..+|+.-.+|....+|++|+..-. |-
T Consensus 56 ~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~~~p--~~ 133 (202)
T 2fpo_A 56 AQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPP--FR 133 (202)
T ss_dssp CEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEECCS--SS
T ss_pred CeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEECCC--CC
Confidence 58999999998887777777656888887542 333444443221 01124557765556666779998876433 32
Q ss_pred Chhhhcccccchhh---cccCceEEEecCCCch
Q 024173 179 SPKYLNKTLPDLAR---VASDGVLIFAGYPGQQ 208 (271)
Q Consensus 179 spryLNkTLPeLaR---vsadglViF~G~Pgqq 208 (271)
.....+.+.++.+ +..+|++++.-.+.+.
T Consensus 134 -~~~~~~~l~~l~~~~~L~pgG~l~i~~~~~~~ 165 (202)
T 2fpo_A 134 -RGLLEETINLLEDNGWLADEALIYVESEVENG 165 (202)
T ss_dssp -TTTHHHHHHHHHHTTCEEEEEEEEEEEEGGGC
T ss_pred -CCcHHHHHHHHHhcCccCCCcEEEEEECCCcc
Confidence 3445567777877 7889999988776554
No 118
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=88.76 E-value=1.5 Score=33.10 Aligned_cols=108 Identities=13% Similarity=0.118 Sum_probs=62.8
Q ss_pred cccceeeecCCchhHhHhhhcc--cccccccccccc--ccchhHHHHHHH--hhceeeeeeecCCCCCCCCCccEEEecc
Q 024173 100 SMHKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKSLV--HKGIVRVADIKFPLPYRAKSFPLVIVSD 173 (271)
Q Consensus 100 sM~kVLHVGPdtC~VVs~LLkE--e~tEAWGVEPyd--ied~d~~CKsLv--rKGiVRvADIkfpLPYR~kSFslVivSD 173 (271)
.-.+||-+|..+-.....|++. ...+.+|||..+ ++-+..+++..- .+=-+..+|+.-..++-..+|++|+..-
T Consensus 22 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~ 101 (197)
T 3eey_A 22 EGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMFNL 101 (197)
T ss_dssp TTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEEEE
T ss_pred CCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEEcC
Confidence 3358999999998887777776 446889988653 333333333220 1112455676433335558999998653
Q ss_pred cc-c------ccChhhhcccccchhh-cccCceEEEecCCCc
Q 024173 174 AL-D------YLSPKYLNKTLPDLAR-VASDGVLIFAGYPGQ 207 (271)
Q Consensus 174 aL-D------yLspryLNkTLPeLaR-vsadglViF~G~Pgq 207 (271)
.+ . .-.+...-+.|-++.| +..+|.++++.+++.
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~ 143 (197)
T 3eey_A 102 GYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYGG 143 (197)
T ss_dssp SBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCBT
T ss_pred CcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccCC
Confidence 22 0 0112222235666666 456788888876663
No 119
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=88.71 E-value=0.98 Score=36.87 Aligned_cols=71 Identities=17% Similarity=0.251 Sum_probs=45.3
Q ss_pred cccceeeecCCchhHhHhhhcc-cccccccccccc--ccchhHHHHHHHh-hceeeeeeecCCCCCCCCCccEEEec
Q 024173 100 SMHKVLHVGPDTCSVVSTLLKE-EETEAWGVEPYD--IEDADARCKSLVH-KGIVRVADIKFPLPYRAKSFPLVIVS 172 (271)
Q Consensus 100 sM~kVLHVGPdtC~VVs~LLkE-e~tEAWGVEPyd--ied~d~~CKsLvr-KGiVRvADIkfpLPYR~kSFslVivS 172 (271)
.-.+||-+|-.|..+...|.++ ...+.+|||..+ ++-+..|++.+-- +--+..+|+.-++| ..+|++||..
T Consensus 109 ~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~~~--~~~fD~Iv~n 183 (276)
T 2b3t_A 109 QPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSALA--GQQFAMIVSN 183 (276)
T ss_dssp SCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGGT--TCCEEEEEEC
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhhcc--cCCccEEEEC
Confidence 3458999999998887777755 356888888653 3444455443311 11234566655554 5689998875
No 120
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=88.50 E-value=0.69 Score=36.63 Aligned_cols=110 Identities=15% Similarity=0.091 Sum_probs=65.7
Q ss_pred ccceeeecCCchhHhHhhhcc-c-ccccccccccc--ccchhHHHHHHHhhc--eeeeeeecCCCCCCCCCccEEEeccc
Q 024173 101 MHKVLHVGPDTCSVVSTLLKE-E-ETEAWGVEPYD--IEDADARCKSLVHKG--IVRVADIKFPLPYRAKSFPLVIVSDA 174 (271)
Q Consensus 101 M~kVLHVGPdtC~VVs~LLkE-e-~tEAWGVEPyd--ied~d~~CKsLvrKG--iVRvADIkfpLPYR~kSFslVivSDa 174 (271)
-.+||-+|-.+......|++. . ..+..|+|.-+ ++.+..+++..--.+ -+..+|+.-+ +...+|++|+. |
T Consensus 94 ~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~D~v~~-~- 169 (255)
T 3mb5_A 94 GDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEG--IEEENVDHVIL-D- 169 (255)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGC--CCCCSEEEEEE-C-
T ss_pred CCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhc--cCCCCcCEEEE-C-
Confidence 357999999998888887766 3 67888887642 334444444331122 3445676644 44678999886 3
Q ss_pred ccccChhhhcccccchhhc-ccCceEEEec-CCCchhhhHHhhhhcC
Q 024173 175 LDYLSPKYLNKTLPDLARV-ASDGVLIFAG-YPGQQRAKVAELSKFG 219 (271)
Q Consensus 175 LDyLspryLNkTLPeLaRv-sadglViF~G-~Pgqqrakvaelskfg 219 (271)
+....+.|.++.|+ ..+|.+++.. ...|...-...+.+.|
T Consensus 170 -----~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~g 211 (255)
T 3mb5_A 170 -----LPQPERVVEHAAKALKPGGFFVAYTPCSNQVMRLHEKLREFK 211 (255)
T ss_dssp -----SSCGGGGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHTG
T ss_pred -----CCCHHHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcC
Confidence 22335667777774 5567777665 3333333333444444
No 121
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=88.35 E-value=0.81 Score=39.37 Aligned_cols=121 Identities=15% Similarity=0.165 Sum_probs=66.2
Q ss_pred CccchHHHHhHhHHHHHHhcccccceeeecCCchhHhHhhhccc-ccccccccccc--ccchhHHHHHHH------hhce
Q 024173 79 DFSCTSEIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYD--IEDADARCKSLV------HKGI 149 (271)
Q Consensus 79 d~sct~eV~~AiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEPyd--ied~d~~CKsLv------rKGi 149 (271)
|.-...|.+..+|.+.. ..-++||.+|-.++.+...|++.. ..+..+||.-+ ++-+..+...+- .+=-
T Consensus 65 de~~Y~e~l~~~~l~~~---~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~ 141 (294)
T 3adn_A 65 DEFIYHEMMTHVPLLAH---GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFK 141 (294)
T ss_dssp THHHHHHHHHHHHHHHS---TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCC
T ss_pred chhHHHHHHHHHHHhcC---CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceE
Confidence 33344566666666532 345799999999999999999873 45677777532 222222222220 1224
Q ss_pred eeeeeecCCCCCCCCCccEEEecccccccChh-hh--cccccchhh-cccCceEEEec
Q 024173 150 VRVADIKFPLPYRAKSFPLVIVSDALDYLSPK-YL--NKTLPDLAR-VASDGVLIFAG 203 (271)
Q Consensus 150 VRvADIkfpLPYR~kSFslVivSDaLDyLspr-yL--NkTLPeLaR-vsadglViF~G 203 (271)
+.++|..-.++....+|++||+ |.-|-..|. .| ...+-++.| +..+|++++..
T Consensus 142 ~~~~D~~~~l~~~~~~fDvIi~-D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 142 LVIDDGVNFVNQTSQTFDVIIS-DCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp EECSCSCC---CCCCCEEEEEE-CC----------CCHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEChHHHHHhhcCCCccEEEE-CCCCccCcchhccHHHHHHHHHHhcCCCCEEEEec
Confidence 6678876556666789998877 665543332 11 222334444 56788877753
No 122
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=88.33 E-value=1.5 Score=37.99 Aligned_cols=144 Identities=14% Similarity=0.144 Sum_probs=90.0
Q ss_pred HHHHHHhc--ccccceeeecCCchhHhHhhhccc-cccccccccccccchhHHHHHHHhhc-eeeeeeecCCCCCCCCCc
Q 024173 91 PILKKAYG--DSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLVHKG-IVRVADIKFPLPYRAKSF 166 (271)
Q Consensus 91 P~LkkaYG--dsM~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEPydied~d~~CKsLvrKG-iVRvADIkfpLPYR~kSF 166 (271)
+-+-+.|. ..-.+||-||-.|-.....|++.- ..+.-|++ +..+-...+.. .+ -+...|+--|+| +.
T Consensus 192 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D---~~~~~~~a~~~--~~v~~~~~d~~~~~p---~~- 262 (368)
T 3reo_A 192 KKILEMYNGFEGLTTIVDVGGGTGAVASMIVAKYPSINAINFD---LPHVIQDAPAF--SGVEHLGGDMFDGVP---KG- 262 (368)
T ss_dssp HHHHTTCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEE---CHHHHTTCCCC--TTEEEEECCTTTCCC---CC-
T ss_pred HHHHHhcccccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEe---hHHHHHhhhhc--CCCEEEecCCCCCCC---CC-
Confidence 33444553 345789999999999988888753 34455554 32222222211 12 234467654777 23
Q ss_pred cEEEecccccccChhhhcccccchhhc-ccCceEEEec--CCCch-------hhhHHhhhhcC--CccccccchhHHHHH
Q 024173 167 PLVIVSDALDYLSPKYLNKTLPDLARV-ASDGVLIFAG--YPGQQ-------RAKVAELSKFG--RPAKMRSSSWWIRYF 234 (271)
Q Consensus 167 slVivSDaLDyLspryLNkTLPeLaRv-sadglViF~G--~Pgqq-------rakvaelskfg--rpaK~rsssWW~r~F 234 (271)
++|+.+.+|.++++...-+.|-++.|+ ..+|.+++.- .|... .....++.-+. ...+.|+...|.+.|
T Consensus 263 D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~rt~~e~~~ll 342 (368)
T 3reo_A 263 DAIFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNPGGKERTEKEFQALA 342 (368)
T ss_dssp SEEEEESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEECCCCSSCCCCHHHHHHHHHHHHHHHHSSBCCCCCHHHHHHHH
T ss_pred CEEEEechhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhhhHHHhhhHHHHhhcCCCccCCHHHHHHHH
Confidence 999999999999988877888888876 4567666643 23221 11223333322 245778889999999
Q ss_pred HHhccccch
Q 024173 235 VQTSLEENE 243 (271)
Q Consensus 235 ~qt~LeEnE 243 (271)
.++|++.-+
T Consensus 343 ~~AGF~~v~ 351 (368)
T 3reo_A 343 MASGFRGFK 351 (368)
T ss_dssp HHTTCCEEE
T ss_pred HHCCCeeeE
Confidence 999987543
No 123
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=88.23 E-value=0.32 Score=37.44 Aligned_cols=96 Identities=18% Similarity=0.115 Sum_probs=59.3
Q ss_pred cceeeecCCchhHhHhhhcccc--cccccccccc--ccchhHHHHHHHhhc-eeeeeeecCCCCCCCCCccEEEeccccc
Q 024173 102 HKVLHVGPDTCSVVSTLLKEEE--TEAWGVEPYD--IEDADARCKSLVHKG-IVRVADIKFPLPYRAKSFPLVIVSDALD 176 (271)
Q Consensus 102 ~kVLHVGPdtC~VVs~LLkEe~--tEAWGVEPyd--ied~d~~CKsLvrKG-iVRvADIkfpLPYR~kSFslVivSDaLD 176 (271)
.+||.+|..+-.....|.+... .+..|||+.+ ++-+..+.+..--.. -+..+|+.-++| ...+|++||+...+.
T Consensus 79 ~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~-~~~~fD~v~~~~~~~ 157 (215)
T 2yxe_A 79 MKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYE-PLAPYDRIYTTAAGP 157 (215)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCG-GGCCEEEEEESSBBS
T ss_pred CEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCC-CCCCeeEEEECCchH
Confidence 4899999998887777776553 6788888653 222222222211011 234567754444 256899999999998
Q ss_pred ccChhhhcccccchhhc-ccCceEEEecCCC
Q 024173 177 YLSPKYLNKTLPDLARV-ASDGVLIFAGYPG 206 (271)
Q Consensus 177 yLspryLNkTLPeLaRv-sadglViF~G~Pg 206 (271)
++.. ++.|+ ..+|.++++=.++
T Consensus 158 ~~~~--------~~~~~L~pgG~lv~~~~~~ 180 (215)
T 2yxe_A 158 KIPE--------PLIRQLKDGGKLLMPVGRY 180 (215)
T ss_dssp SCCH--------HHHHTEEEEEEEEEEESSS
T ss_pred HHHH--------HHHHHcCCCcEEEEEECCC
Confidence 8763 44443 4567776664443
No 124
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=88.14 E-value=1.4 Score=33.83 Aligned_cols=100 Identities=14% Similarity=0.108 Sum_probs=61.9
Q ss_pred cccceeeecCCchhHhHhhhccc-ccccccccccc--ccchhHHHHHHH-hhceeeeeeecCCCCCCCCCccEEEecccc
Q 024173 100 SMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYD--IEDADARCKSLV-HKGIVRVADIKFPLPYRAKSFPLVIVSDAL 175 (271)
Q Consensus 100 sM~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEPyd--ied~d~~CKsLv-rKGiVRvADIkfpLPYR~kSFslVivSDaL 175 (271)
.-.+||-+|..+-.+...|.+.. ..+..|||+.+ ++-+..+++..- .+=-+..+|+.-.++.- .+|++|+....+
T Consensus 40 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~-~~~D~i~~~~~~ 118 (204)
T 3e05_A 40 DDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDL-PDPDRVFIGGSG 118 (204)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTS-CCCSEEEESCCT
T ss_pred CCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhcC-CCCCEEEECCCC
Confidence 34689999999988777777664 46788887643 233433333221 11123446664444433 679999887766
Q ss_pred cccChhhhcccccchhh-cccCceEEEecCC
Q 024173 176 DYLSPKYLNKTLPDLAR-VASDGVLIFAGYP 205 (271)
Q Consensus 176 DyLspryLNkTLPeLaR-vsadglViF~G~P 205 (271)
. .+.+.|.++.| +..+|.+++....
T Consensus 119 ~-----~~~~~l~~~~~~LkpgG~l~~~~~~ 144 (204)
T 3e05_A 119 G-----MLEEIIDAVDRRLKSEGVIVLNAVT 144 (204)
T ss_dssp T-----CHHHHHHHHHHHCCTTCEEEEEECB
T ss_pred c-----CHHHHHHHHHHhcCCCeEEEEEecc
Confidence 4 34456667766 4677888887644
No 125
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=88.02 E-value=0.42 Score=39.88 Aligned_cols=99 Identities=14% Similarity=0.044 Sum_probs=66.1
Q ss_pred ccceeeecCCchhHhHhhhccccccccccccccccchhHHHHHHHh----------------------hceeeeeeecCC
Q 024173 101 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVH----------------------KGIVRVADIKFP 158 (271)
Q Consensus 101 M~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvr----------------------KGiVRvADIkfp 158 (271)
=.+||-+|=.+=.....|.+. .-+..||+..+- +-..++.... +--+.++|+ +-
T Consensus 69 ~~~vLD~GCG~G~~~~~La~~-G~~V~gvD~S~~--~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~-~~ 144 (252)
T 2gb4_A 69 GLRVFFPLCGKAIEMKWFADR-GHTVVGVEISEI--GIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSI-FD 144 (252)
T ss_dssp SCEEEETTCTTCTHHHHHHHT-TCEEEEECSCHH--HHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCT-TT
T ss_pred CCeEEEeCCCCcHHHHHHHHC-CCeEEEEECCHH--HHHHHHHhcccccccccccccccccccccCCCceEEEECcc-cc
Confidence 358999998887766666654 558888887642 1122222111 112456787 45
Q ss_pred CCCCC-CCccEEEecccccccChhhhcccccchhhcc-cCceEEEec
Q 024173 159 LPYRA-KSFPLVIVSDALDYLSPKYLNKTLPDLARVA-SDGVLIFAG 203 (271)
Q Consensus 159 LPYR~-kSFslVivSDaLDyLspryLNkTLPeLaRvs-adglViF~G 203 (271)
||... .+|++|+...+|.+|.+.-..+.+-+++|+- .+|.++++.
T Consensus 145 l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~ 191 (252)
T 2gb4_A 145 LPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAV 191 (252)
T ss_dssp GGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEE
Confidence 77653 7999999999999998876777788888854 566665444
No 126
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=87.76 E-value=0.33 Score=38.11 Aligned_cols=103 Identities=10% Similarity=0.050 Sum_probs=65.6
Q ss_pred cceeeecCCchhHhHhhhcccccccccccccc--ccchhHHHHHHH---hhceeeeeeecCCCCC-CCCC-ccEEEeccc
Q 024173 102 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV---HKGIVRVADIKFPLPY-RAKS-FPLVIVSDA 174 (271)
Q Consensus 102 ~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLv---rKGiVRvADIkfpLPY-R~kS-FslVivSDa 174 (271)
.+||-+|-.|-.+.-.+++....+..|||..+ ++-+..|++..- .+--+..+|+.-.+|. ...+ |++|+....
T Consensus 55 ~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~~~ 134 (201)
T 2ift_A 55 SECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLDPP 134 (201)
T ss_dssp CEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEECCC
T ss_pred CeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEECCC
Confidence 47999999988877667777666889988653 344555544321 1112445676433443 3568 998886544
Q ss_pred ccccChhhhcccccchhh---cccCceEEEecCCCc
Q 024173 175 LDYLSPKYLNKTLPDLAR---VASDGVLIFAGYPGQ 207 (271)
Q Consensus 175 LDyLspryLNkTLPeLaR---vsadglViF~G~Pgq 207 (271)
|- ...+.+.+.++.+ +..+|+++++-.|.+
T Consensus 135 --~~-~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 135 --FH-FNLAEQAISLLCENNWLKPNALIYVETEKDK 167 (201)
T ss_dssp --SS-SCHHHHHHHHHHHTTCEEEEEEEEEEEESSS
T ss_pred --CC-CccHHHHHHHHHhcCccCCCcEEEEEECCCC
Confidence 32 3345566777754 678899998887765
No 127
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=87.65 E-value=0.69 Score=36.68 Aligned_cols=94 Identities=19% Similarity=0.217 Sum_probs=57.9
Q ss_pred cceeeecCCchhHhHhhhcccccccccccccc--ccchhHHHHHHHhhc-eeeeeeecCCCCCCCC-CccEEEecccccc
Q 024173 102 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKG-IVRVADIKFPLPYRAK-SFPLVIVSDALDY 177 (271)
Q Consensus 102 ~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvrKG-iVRvADIkfpLPYR~k-SFslVivSDaLDy 177 (271)
.+||-||-.+-.....|.+....+..|||+.+ ++.+..+++.+--.. -+..+|+..++| .. .|++||+...+.+
T Consensus 93 ~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~--~~~~fD~Ii~~~~~~~ 170 (235)
T 1jg1_A 93 MNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGFP--PKAPYDVIIVTAGAPK 170 (235)
T ss_dssp CCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCG--GGCCEEEEEECSBBSS
T ss_pred CEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCcccCCC--CCCCccEEEECCcHHH
Confidence 48999999988777777665447888888643 233333333221111 245567755554 34 4999999999887
Q ss_pred cChhhhcccccchhh-cccCceEEEecCC
Q 024173 178 LSPKYLNKTLPDLAR-VASDGVLIFAGYP 205 (271)
Q Consensus 178 LspryLNkTLPeLaR-vsadglViF~G~P 205 (271)
+.+ ++.| +..+|.++++-.+
T Consensus 171 ~~~--------~~~~~L~pgG~lvi~~~~ 191 (235)
T 1jg1_A 171 IPE--------PLIEQLKIGGKLIIPVGS 191 (235)
T ss_dssp CCH--------HHHHTEEEEEEEEEEECS
T ss_pred HHH--------HHHHhcCCCcEEEEEEec
Confidence 764 3444 4456776665433
No 128
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=87.41 E-value=0.42 Score=41.13 Aligned_cols=125 Identities=20% Similarity=0.255 Sum_probs=67.6
Q ss_pred HHHhHhHHHHHHhcccccceeeecCCchhHhHhhhccc-cccccccccccccchhHHHHHHHh---hce------eeeee
Q 024173 85 EIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLVH---KGI------VRVAD 154 (271)
Q Consensus 85 eV~~AiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEPydied~d~~CKsLvr---KGi------VRvAD 154 (271)
|.+..+|.+. . ..-++||.+|-.+..+...|++.. ..+.-+||.-+ ++-..|+.-.. .|+ +.++|
T Consensus 83 e~l~~~~l~~--~-~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~--~~i~~ar~~~~~~~~~~~~~rv~v~~~D 157 (304)
T 2o07_A 83 EMIANLPLCS--H-PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDE--DVIQVSKKFLPGMAIGYSSSKLTLHVGD 157 (304)
T ss_dssp HHHHHHHHTT--S-SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCH--HHHHHHHHHCHHHHGGGGCTTEEEEESC
T ss_pred HHHHHHHHhh--C-CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCH--HHHHHHHHHhHHhhcccCCCcEEEEECc
Confidence 5555555432 1 233789999999999999999763 45677777532 12223332221 232 45677
Q ss_pred ecCCCCCCCCCccEEEecccccccChh---hhcccccchhh-cccCceEEEec-CCCchhhhHHhh
Q 024173 155 IKFPLPYRAKSFPLVIVSDALDYLSPK---YLNKTLPDLAR-VASDGVLIFAG-YPGQQRAKVAEL 215 (271)
Q Consensus 155 IkfpLPYR~kSFslVivSDaLDyLspr---yLNkTLPeLaR-vsadglViF~G-~Pgqqrakvael 215 (271)
..--|+....+|++||+ |+-+...|. +....+.++.| +..+|++++.. .|--+.....++
T Consensus 158 a~~~l~~~~~~fD~Ii~-d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~ 222 (304)
T 2o07_A 158 GFEFMKQNQDAFDVIIT-DSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGECQWLHLDLIKEM 222 (304)
T ss_dssp HHHHHHTCSSCEEEEEE-ECC-----------CHHHHHHHHHEEEEEEEEEEEECTTTCHHHHHHH
T ss_pred HHHHHhhCCCCceEEEE-CCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecCCcccchHHHHHH
Confidence 54334445688999887 776654431 11223444444 46788888754 554333333344
No 129
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=87.40 E-value=0.86 Score=34.68 Aligned_cols=107 Identities=13% Similarity=0.021 Sum_probs=63.1
Q ss_pred cceeeecCCchhHhHhhhcc-cccccccccccc--ccchhHHHHHHHhhc-eeeeeeecCCCCCCCCCccEEEecccccc
Q 024173 102 HKVLHVGPDTCSVVSTLLKE-EETEAWGVEPYD--IEDADARCKSLVHKG-IVRVADIKFPLPYRAKSFPLVIVSDALDY 177 (271)
Q Consensus 102 ~kVLHVGPdtC~VVs~LLkE-e~tEAWGVEPyd--ied~d~~CKsLvrKG-iVRvADIkfpLPYR~kSFslVivSDaLDy 177 (271)
.+||.+|..+-.....|.+. ...+..|||+.+ ++-+..+++.+--.. -+..+|+.-.. ...+|++|+. +.++.
T Consensus 67 ~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~--~~~~~D~i~~-~~~~~ 143 (207)
T 1jsx_A 67 ERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFP--SEPPFDGVIS-RAFAS 143 (207)
T ss_dssp SEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSC--CCSCEEEEEC-SCSSS
T ss_pred CeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCC--ccCCcCEEEE-eccCC
Confidence 48999999999887777765 356888888653 233333433321111 13345554332 3478999984 44322
Q ss_pred cChhhhcccccchhhc-ccCceEEEecCCCchhhhHHhhhh
Q 024173 178 LSPKYLNKTLPDLARV-ASDGVLIFAGYPGQQRAKVAELSK 217 (271)
Q Consensus 178 LspryLNkTLPeLaRv-sadglViF~G~Pgqqrakvaelsk 217 (271)
+.+.+.++.|+ ..+|.+++.-.+.|. ..+.++.+
T Consensus 144 -----~~~~l~~~~~~L~~gG~l~~~~~~~~~-~~~~~~~~ 178 (207)
T 1jsx_A 144 -----LNDMVSWCHHLPGEQGRFYALKGQMPE-DEIALLPE 178 (207)
T ss_dssp -----HHHHHHHHTTSEEEEEEEEEEESSCCH-HHHHTSCT
T ss_pred -----HHHHHHHHHHhcCCCcEEEEEeCCCch-HHHHHHhc
Confidence 34555666554 567887777555544 55555544
No 130
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=87.39 E-value=0.36 Score=41.31 Aligned_cols=100 Identities=16% Similarity=0.113 Sum_probs=66.2
Q ss_pred cceeeecCCchhHhHhhhcccc-cccccccccc--ccchhHHHHHHHhhceeeeeeecCCCCCCCCCccEEEecccccc-
Q 024173 102 HKVLHVGPDTCSVVSTLLKEEE-TEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDY- 177 (271)
Q Consensus 102 ~kVLHVGPdtC~VVs~LLkEe~-tEAWGVEPyd--ied~d~~CKsLvrKGiVRvADIkfpLPYR~kSFslVivSDaLDy- 177 (271)
.+||.+|-.+..+...|.+... .+..|||... ++-+..+++..--..-+..+|+- ..+ ..+|++||....+.+
T Consensus 198 ~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~-~~~--~~~fD~Iv~~~~~~~g 274 (343)
T 2pjd_A 198 GKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVF-SEV--KGRFDMIISNPPFHDG 274 (343)
T ss_dssp SBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTT-TTC--CSCEEEEEECCCCCSS
T ss_pred CeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEcccc-ccc--cCCeeEEEECCCcccC
Confidence 4899999999998888887653 4788887654 34455554432112335566762 223 679999999887765
Q ss_pred --cChhhhcccccchhhc-ccCceEEEecC
Q 024173 178 --LSPKYLNKTLPDLARV-ASDGVLIFAGY 204 (271)
Q Consensus 178 --LspryLNkTLPeLaRv-sadglViF~G~ 204 (271)
.+.....+.+-++.|+ ..+|.+++..+
T Consensus 275 ~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 304 (343)
T 2pjd_A 275 MQTSLDAAQTLIRGAVRHLNSGGELRIVAN 304 (343)
T ss_dssp SHHHHHHHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred ccCCHHHHHHHHHHHHHhCCCCcEEEEEEc
Confidence 2344456667777775 56788888764
No 131
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=86.82 E-value=0.86 Score=40.71 Aligned_cols=122 Identities=14% Similarity=0.114 Sum_probs=74.8
Q ss_pred hHHHHhHhHHHHHHhcccccceeeecCCchhHhHhhhcccccccccccccc--ccchhHHHHHHHhhceeeeeeecCCCC
Q 024173 83 TSEIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLP 160 (271)
Q Consensus 83 t~eV~~AiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvrKGiVRvADIkfpLP 160 (271)
|..+.+.+|-..+.-...-.+||-+|-.+-.+...|.+. ..+.+|||..+ ++-+..|++..--..-+..+|+.-. +
T Consensus 216 t~~ll~~l~~~l~~~~~~~~~VLDlGcG~G~~~~~la~~-g~~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~-~ 293 (381)
T 3dmg_A 216 SLLLLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARM-GAEVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEA-L 293 (381)
T ss_dssp HHHHHHHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHHT-TCEEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTT-S
T ss_pred HHHHHHHHHHhhcccCCCCCEEEEEeeeCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhc-c
Confidence 445556655332111223458999999998888777776 56888888643 3334444443221234566777543 3
Q ss_pred CCCCCccEEEecccccc---cChhhhcccccchhh-cccCceEEEecCCC
Q 024173 161 YRAKSFPLVIVSDALDY---LSPKYLNKTLPDLAR-VASDGVLIFAGYPG 206 (271)
Q Consensus 161 YR~kSFslVivSDaLDy---LspryLNkTLPeLaR-vsadglViF~G~Pg 206 (271)
....+|++||....+.+ ....-+.+.+.++.| +..+|.+++..++.
T Consensus 294 ~~~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~ 343 (381)
T 3dmg_A 294 TEEARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSNPF 343 (381)
T ss_dssp CTTCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEECTT
T ss_pred ccCCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEEcCC
Confidence 34679999998766655 334444455566555 47788999887664
No 132
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=86.54 E-value=0.15 Score=42.23 Aligned_cols=127 Identities=16% Similarity=0.131 Sum_probs=69.7
Q ss_pred cceeeecCCchhHhHhhhcccccccccccccc--ccchhHHHHHHHhhce--e---eeeeecCCCCCCCCCccEEEeccc
Q 024173 102 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGI--V---RVADIKFPLPYRAKSFPLVIVSDA 174 (271)
Q Consensus 102 ~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvrKGi--V---RvADIkfpLPYR~kSFslVivSDa 174 (271)
.+||-||-.|-.....|++....+.+||++.+ ++-+-.+.......+. + ...|+..++ +...+|++|+.+
T Consensus 39 ~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~~D~v~~~-- 115 (232)
T 3opn_A 39 KTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQGR-PSFTSIDVSFIS-- 115 (232)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCSCC-CSEEEECCSSSC--
T ss_pred CEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCcCC-CCEEEEEEEhhh--
Confidence 57999999999988888887656899998753 2322222221110011 1 113333322 233345544332
Q ss_pred ccccChhhhcccccchhhcc-cCceEEEecCCCchhhhHHhhhhcCCc----cccccchhHHHHHHHhccc
Q 024173 175 LDYLSPKYLNKTLPDLARVA-SDGVLIFAGYPGQQRAKVAELSKFGRP----AKMRSSSWWIRYFVQTSLE 240 (271)
Q Consensus 175 LDyLspryLNkTLPeLaRvs-adglViF~G~Pgqqrakvaelskfgrp----aK~rsssWW~r~F~qt~Le 240 (271)
|.+.|+++.|+- .+|.++|.-.| |-.+.-.++.|.|.. ....+..-|.+++.++|++
T Consensus 116 --------l~~~l~~i~rvLkpgG~lv~~~~p-~~e~~~~~~~~~G~~~d~~~~~~~~~~l~~~l~~aGf~ 177 (232)
T 3opn_A 116 --------LDLILPPLYEILEKNGEVAALIKP-QFEAGREQVGKNGIIRDPKVHQMTIEKVLKTATQLGFS 177 (232)
T ss_dssp --------GGGTHHHHHHHSCTTCEEEEEECH-HHHSCHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHTEE
T ss_pred --------HHHHHHHHHHhccCCCEEEEEECc-ccccCHHHhCcCCeecCcchhHHHHHHHHHHHHHCCCE
Confidence 378999999975 56777775444 222223344454431 1122445667777777765
No 133
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=86.49 E-value=0.82 Score=36.16 Aligned_cols=95 Identities=14% Similarity=0.038 Sum_probs=60.0
Q ss_pred cceeeecCCchhHhHhhhcccccccccccccc--ccchhHHHHHHHhh--ceeeeeeecCCCCCCCCCccEEEecccccc
Q 024173 102 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHK--GIVRVADIKFPLPYRAKSFPLVIVSDALDY 177 (271)
Q Consensus 102 ~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvrK--GiVRvADIkfpLPYR~kSFslVivSDaLDy 177 (271)
.+||-+|..|-...-.|.+. ..+.+|||+.+ ++-+..+++.+--. =-+..+|+.-.++.- .+|++|+....+
T Consensus 57 ~~vLDlGcG~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~-~~~D~v~~~~~~-- 132 (204)
T 3njr_A 57 ELLWDIGGGSGSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADL-PLPEAVFIGGGG-- 132 (204)
T ss_dssp CEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTS-CCCSEEEECSCC--
T ss_pred CEEEEecCCCCHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccC-CCCCEEEECCcc--
Confidence 57999999997776667666 77899998653 33344444332111 123456665444443 469999876654
Q ss_pred cChhhhcccccchhh-cccCceEEEecCC
Q 024173 178 LSPKYLNKTLPDLAR-VASDGVLIFAGYP 205 (271)
Q Consensus 178 LspryLNkTLPeLaR-vsadglViF~G~P 205 (271)
.++ .+.++.| +..+|.+++....
T Consensus 133 -~~~----~l~~~~~~LkpgG~lv~~~~~ 156 (204)
T 3njr_A 133 -SQA----LYDRLWEWLAPGTRIVANAVT 156 (204)
T ss_dssp -CHH----HHHHHHHHSCTTCEEEEEECS
T ss_pred -cHH----HHHHHHHhcCCCcEEEEEecC
Confidence 222 5666666 4678888888743
No 134
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=86.48 E-value=0.3 Score=35.56 Aligned_cols=103 Identities=14% Similarity=0.057 Sum_probs=62.4
Q ss_pred ccceeeecCCchhHhHhhhcccccccccccccc--ccchhHHHHHHHhhceeeeeeecCCCCCC---CCCccEEEecccc
Q 024173 101 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYR---AKSFPLVIVSDAL 175 (271)
Q Consensus 101 M~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvrKGiVRvADIkfpLPYR---~kSFslVivSDaL 175 (271)
-.+||-+|..+......|.+.... ..|||..+ ++-+..+.+..--+--+..+|+.-.+|.- ..+|++|+.....
T Consensus 42 ~~~vLD~GcG~G~~~~~l~~~~~~-v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~~~ 120 (171)
T 1ws6_A 42 RGRFLDPFAGSGAVGLEAASEGWE-AVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMAPPY 120 (171)
T ss_dssp CCEEEEETCSSCHHHHHHHHTTCE-EEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEECCCT
T ss_pred CCeEEEeCCCcCHHHHHHHHCCCe-EEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEECCCC
Confidence 358999999999988888776444 88887642 22233333221002235556665444432 2379998876543
Q ss_pred cccChhhhcccccchh--h-cccCceEEEecCCCch
Q 024173 176 DYLSPKYLNKTLPDLA--R-VASDGVLIFAGYPGQQ 208 (271)
Q Consensus 176 DyLspryLNkTLPeLa--R-vsadglViF~G~Pgqq 208 (271)
. ..+.+.+..+. | +..+|+++++-.+.+.
T Consensus 121 ~----~~~~~~~~~~~~~~~L~~gG~~~~~~~~~~~ 152 (171)
T 1ws6_A 121 A----MDLAALFGELLASGLVEAGGLYVLQHPKDLY 152 (171)
T ss_dssp T----SCTTHHHHHHHHHTCEEEEEEEEEEEETTSC
T ss_pred c----hhHHHHHHHHHhhcccCCCcEEEEEeCCccC
Confidence 3 33445566665 4 5678888888766554
No 135
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=86.39 E-value=1.9 Score=37.16 Aligned_cols=95 Identities=15% Similarity=0.200 Sum_probs=62.7
Q ss_pred cceeeecCCchhHhHhhhccccccccccccccccchhHHHHHHHh-hce---e--eeeeec-CCCCCCCCCccEEEeccc
Q 024173 102 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVH-KGI---V--RVADIK-FPLPYRAKSFPLVIVSDA 174 (271)
Q Consensus 102 ~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvr-KGi---V--RvADIk-fpLPYR~kSFslVivSDa 174 (271)
.+||-||-.|-.+...+.+....+..|||+.++ + ..++..++ .|+ | ..+|+. +++| .+|++||....
T Consensus 52 ~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~~--~-~~a~~~~~~~~l~~~v~~~~~d~~~~~~~---~~~D~Ivs~~~ 125 (348)
T 2y1w_A 52 KIVLDVGCGSGILSFFAAQAGARKIYAVEASTM--A-QHAEVLVKSNNLTDRIVVIPGKVEEVSLP---EQVDIIISEPM 125 (348)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCSEEEEEECSTH--H-HHHHHHHHHTTCTTTEEEEESCTTTCCCS---SCEEEEEECCC
T ss_pred CEEEEcCCCccHHHHHHHhCCCCEEEEECCHHH--H-HHHHHHHHHcCCCCcEEEEEcchhhCCCC---CceeEEEEeCc
Confidence 589999999998887777776678999999753 3 34444443 343 3 345553 2444 57999988777
Q ss_pred ccccChhhhcccccchhhc-ccCceEEEe
Q 024173 175 LDYLSPKYLNKTLPDLARV-ASDGVLIFA 202 (271)
Q Consensus 175 LDyLspryLNkTLPeLaRv-sadglViF~ 202 (271)
+.++....+-.++-++.|+ ..+|++|+.
T Consensus 126 ~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 126 GYMLFNERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp BTTBTTTSHHHHHHHGGGGEEEEEEEESC
T ss_pred hhcCChHHHHHHHHHHHhhcCCCeEEEEe
Confidence 7777655444455555553 567777754
No 136
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=86.37 E-value=1.1 Score=35.65 Aligned_cols=124 Identities=15% Similarity=0.225 Sum_probs=72.1
Q ss_pred HHHHhcccccceeeecCCchhHhHhhhccc-cccccccccccccchhHHHHH-HHhhce--e--eeeeecCCCC--CCCC
Q 024173 93 LKKAYGDSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKS-LVHKGI--V--RVADIKFPLP--YRAK 164 (271)
Q Consensus 93 LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEPydied~d~~CKs-LvrKGi--V--RvADIkfpLP--YR~k 164 (271)
++..||..-..||-||-.|-.....|.+.- +.+..|||..+- +-..++. +.+.|+ | ..+|+.- +| +...
T Consensus 31 ~~~~f~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~--~l~~a~~~~~~~~~~nv~~~~~d~~~-l~~~~~~~ 107 (213)
T 2fca_A 31 WNTVFGNDNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKS--VIVTAVQKVKDSEAQNVKLLNIDADT-LTDVFEPG 107 (213)
T ss_dssp HHHHHTSCCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHH--HHHHHHHHHHHSCCSSEEEECCCGGG-HHHHCCTT
T ss_pred HHHHcCCCCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechH--HHHHHHHHHHHcCCCCEEEEeCCHHH-HHhhcCcC
Confidence 445678777889999999988888877653 578889987641 2222222 223343 3 3356643 33 4567
Q ss_pred CccEEEecccccccChhh----h--cccccchhh-cccCceEEEec-CCCchhhhHHhhhhcC
Q 024173 165 SFPLVIVSDALDYLSPKY----L--NKTLPDLAR-VASDGVLIFAG-YPGQQRAKVAELSKFG 219 (271)
Q Consensus 165 SFslVivSDaLDyLspry----L--NkTLPeLaR-vsadglViF~G-~Pgqqrakvaelskfg 219 (271)
+|+.|++.-...|...+. | -..|.+++| +..+|.++|.. .+.+...-..++.+.|
T Consensus 108 ~~d~v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~g 170 (213)
T 2fca_A 108 EVKRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDNRGLFEYSLKSFSEYG 170 (213)
T ss_dssp SCCEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESCHHHHHHHHHHHHHHT
T ss_pred CcCEEEEECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCC
Confidence 899887532211221111 1 223556666 46778888765 5555544455566654
No 137
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=86.22 E-value=2.6 Score=32.80 Aligned_cols=93 Identities=17% Similarity=0.179 Sum_probs=56.6
Q ss_pred ccceeeecCCchhHhHhhhcccccccccccccc--ccchhHHHHHHHhhce-----eeeeeecCCCCCCCCCccEEEecc
Q 024173 101 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGI-----VRVADIKFPLPYRAKSFPLVIVSD 173 (271)
Q Consensus 101 M~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvrKGi-----VRvADIkfpLPYR~kSFslVivSD 173 (271)
-.+||-+|-.+-.....|++. ..+..|+|+.+ ++-+..+.+. .|+ +..+|+.-++ ....+|++||. |
T Consensus 92 ~~~vldiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~---~~~~~~~~~~~~d~~~~~-~~~~~~D~v~~-~ 165 (248)
T 2yvl_A 92 EKRVLEFGTGSGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKK---FNLGKNVKFFNVDFKDAE-VPEGIFHAAFV-D 165 (248)
T ss_dssp TCEEEEECCTTSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHH---TTCCTTEEEECSCTTTSC-CCTTCBSEEEE-C
T ss_pred CCEEEEeCCCccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHH---cCCCCcEEEEEcChhhcc-cCCCcccEEEE-C
Confidence 358999999988877777776 67788887643 2333333322 233 3445665433 13568999986 2
Q ss_pred cccccChhhhcccccchhh-cccCceEEEecCC
Q 024173 174 ALDYLSPKYLNKTLPDLAR-VASDGVLIFAGYP 205 (271)
Q Consensus 174 aLDyLspryLNkTLPeLaR-vsadglViF~G~P 205 (271)
+....+.|.++.| +..+|.+++.-..
T Consensus 166 ------~~~~~~~l~~~~~~L~~gG~l~~~~~~ 192 (248)
T 2yvl_A 166 ------VREPWHYLEKVHKSLMEGAPVGFLLPT 192 (248)
T ss_dssp ------SSCGGGGHHHHHHHBCTTCEEEEEESS
T ss_pred ------CcCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 2233456666666 4566777666543
No 138
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=86.19 E-value=0.82 Score=35.91 Aligned_cols=95 Identities=19% Similarity=0.220 Sum_probs=59.2
Q ss_pred cceeeecCCchhHhHhhhcccc-------cccccccccc--ccchhHHHHHHH------hhceeeeeeecCCCCCCCCCc
Q 024173 102 HKVLHVGPDTCSVVSTLLKEEE-------TEAWGVEPYD--IEDADARCKSLV------HKGIVRVADIKFPLPYRAKSF 166 (271)
Q Consensus 102 ~kVLHVGPdtC~VVs~LLkEe~-------tEAWGVEPyd--ied~d~~CKsLv------rKGiVRvADIkfpLPYR~kSF 166 (271)
.+||.||-.+......|.+.-. .+..|||+.+ ++-+..+.+.+- ..=-+..+|+.-++|- ..+|
T Consensus 86 ~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~f 164 (227)
T 1r18_A 86 ARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPP-NAPY 164 (227)
T ss_dssp CEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCGG-GCSE
T ss_pred CEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCCCc-CCCc
Confidence 4899999999777766665332 4788988654 334444444321 1112456777665443 2689
Q ss_pred cEEEecccccccChhhhcccccchhh-cccCceEEEecCC
Q 024173 167 PLVIVSDALDYLSPKYLNKTLPDLAR-VASDGVLIFAGYP 205 (271)
Q Consensus 167 slVivSDaLDyLspryLNkTLPeLaR-vsadglViF~G~P 205 (271)
++|++..++.++. .++.| +..+|.++++=.|
T Consensus 165 D~I~~~~~~~~~~--------~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 165 NAIHVGAAAPDTP--------TELINQLASGGRLIVPVGP 196 (227)
T ss_dssp EEEEECSCBSSCC--------HHHHHTEEEEEEEEEEESC
T ss_pred cEEEECCchHHHH--------HHHHHHhcCCCEEEEEEec
Confidence 9999999887654 33333 3457777765443
No 139
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=86.01 E-value=0.92 Score=38.14 Aligned_cols=116 Identities=20% Similarity=0.287 Sum_probs=66.2
Q ss_pred HHHhHhHHHHHHhcccccceeeecCCchhHhHhhhcc-ccccccccccccccchhHHHHHHHh---------hceeeeee
Q 024173 85 EIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKE-EETEAWGVEPYDIEDADARCKSLVH---------KGIVRVAD 154 (271)
Q Consensus 85 eV~~AiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkE-e~tEAWGVEPydied~d~~CKsLvr---------KGiVRvAD 154 (271)
|.+..+|++.. ..-++||.+|-.+..+...+++. ...+..+||.-+ ++-..|+.-.. +=-+.++|
T Consensus 63 e~l~~~~l~~~---~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~--~~v~~ar~~~~~~~~~~~~~rv~v~~~D 137 (275)
T 1iy9_A 63 EMVAHVPLFTH---PNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDG--KVIEYSKKFLPSIAGKLDDPRVDVQVDD 137 (275)
T ss_dssp HHHHHHHHHHS---SSCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCH--HHHHHHHHHCHHHHTTTTSTTEEEEESC
T ss_pred HHHHHHHHhhC---CCCCEEEEECCchHHHHHHHHhCCCCceEEEEECCH--HHHHHHHHHhHhhccccCCCceEEEECc
Confidence 44445565431 24578999999999999999986 345677776432 12223332221 11355677
Q ss_pred ecCCCCCCCCCccEEEecccccccChh-hh--cccccchh-hcccCceEEEec-CCC
Q 024173 155 IKFPLPYRAKSFPLVIVSDALDYLSPK-YL--NKTLPDLA-RVASDGVLIFAG-YPG 206 (271)
Q Consensus 155 IkfpLPYR~kSFslVivSDaLDyLspr-yL--NkTLPeLa-RvsadglViF~G-~Pg 206 (271)
..--|+-...+|++||+ |..+...|. .| ..-+.++. .+..+|++++.. .|-
T Consensus 138 ~~~~l~~~~~~fD~Ii~-d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~~~ 193 (275)
T 1iy9_A 138 GFMHIAKSENQYDVIMV-DSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDNPW 193 (275)
T ss_dssp SHHHHHTCCSCEEEEEE-SCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCCTT
T ss_pred HHHHHhhCCCCeeEEEE-CCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcc
Confidence 54334444678999887 776643321 11 12233333 456788888763 443
No 140
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=85.70 E-value=1.1 Score=34.79 Aligned_cols=74 Identities=11% Similarity=-0.018 Sum_probs=45.3
Q ss_pred ccccceeeecCC-chhHhHhhhcccccccccccccc--ccchhHHHHHHHhhceeeeeeecCCCCCCCCCccEEEec
Q 024173 99 DSMHKVLHVGPD-TCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVS 172 (271)
Q Consensus 99 dsM~kVLHVGPd-tC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvrKGiVRvADIkfpLPYR~kSFslVivS 172 (271)
..-.+||-+|-. +..+...|.+....+..|||..+ ++-+..+++..--+=-+..+|+....++...+|++|+..
T Consensus 54 ~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~n 130 (230)
T 3evz_A 54 RGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSA 130 (230)
T ss_dssp CSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEEC
T ss_pred CCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEEEC
Confidence 344689999999 76655555544367788888643 333444433221122355677654556667899999853
No 141
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=85.44 E-value=0.34 Score=41.55 Aligned_cols=117 Identities=19% Similarity=0.216 Sum_probs=68.6
Q ss_pred HHHHhHhHHHHHHhcccccceeeecCCchhHhHhhhccc-cccccccccccccchhHHHHHHHh---hc-------eeee
Q 024173 84 SEIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLVH---KG-------IVRV 152 (271)
Q Consensus 84 ~eV~~AiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEPydied~d~~CKsLvr---KG-------iVRv 152 (271)
.|.+..+|.+.. ..-.+||.||-.+..+...|++.. ..+..|||.-+ ++-..|+.-.. .| -+.+
T Consensus 64 ~e~l~~~~l~~~---~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~--~~i~~ar~~~~~~~~~~~~~~~v~~~~ 138 (314)
T 1uir_A 64 HETLVHPAMLTH---PEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDG--ELVEVAKRHMPEWHQGAFDDPRAVLVI 138 (314)
T ss_dssp HHHHHHHHHHHS---SCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCH--HHHHHHHHHCHHHHTTGGGCTTEEEEE
T ss_pred HHHHHHHHHhcC---CCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCH--HHHHHHHHHhHhhccccccCCceEEEE
Confidence 355555565432 233789999999999999999863 45677777543 22233333221 12 2456
Q ss_pred eeecCCCCCCCCCccEEEeccccccc---Ch-hh--hcccccchhh-cccCceEEEe-cCCC
Q 024173 153 ADIKFPLPYRAKSFPLVIVSDALDYL---SP-KY--LNKTLPDLAR-VASDGVLIFA-GYPG 206 (271)
Q Consensus 153 ADIkfpLPYR~kSFslVivSDaLDyL---sp-ry--LNkTLPeLaR-vsadglViF~-G~Pg 206 (271)
+|+.--++....+|++||+ |..+.. .| .. ....+-++.| +..+|++++. +.|.
T Consensus 139 ~D~~~~l~~~~~~fD~Ii~-d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~ 199 (314)
T 1uir_A 139 DDARAYLERTEERYDVVII-DLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTGMIL 199 (314)
T ss_dssp SCHHHHHHHCCCCEEEEEE-ECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEEEEC
T ss_pred chHHHHHHhcCCCccEEEE-CCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEccCcc
Confidence 7765445555788999887 666654 32 11 1233444444 4678888775 4443
No 142
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=85.38 E-value=1.2 Score=39.05 Aligned_cols=94 Identities=18% Similarity=0.327 Sum_probs=60.3
Q ss_pred cceeeecCCchhHhHhhhccccccccccccccccchhHHHHHHHhh-c-----eeeeeeec-CCCCCCCCCccEEEeccc
Q 024173 102 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHK-G-----IVRVADIK-FPLPYRAKSFPLVIVSDA 174 (271)
Q Consensus 102 ~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvrK-G-----iVRvADIk-fpLPYR~kSFslVivSDa 174 (271)
.+||-||-.|-...-.|.+....+..|||+.++- ..++..+++ | -+..+|+. +++| .+|++||. +.
T Consensus 65 ~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s~~~---~~a~~~~~~~~~~~~v~~~~~d~~~~~~~---~~~D~Iv~-~~ 137 (376)
T 3r0q_C 65 KTVLDVGTGSGILAIWSAQAGARKVYAVEATKMA---DHARALVKANNLDHIVEVIEGSVEDISLP---EKVDVIIS-EW 137 (376)
T ss_dssp CEEEEESCTTTHHHHHHHHTTCSEEEEEESSTTH---HHHHHHHHHTTCTTTEEEEESCGGGCCCS---SCEEEEEE-CC
T ss_pred CEEEEeccCcCHHHHHHHhcCCCEEEEEccHHHH---HHHHHHHHHcCCCCeEEEEECchhhcCcC---CcceEEEE-cC
Confidence 5899999999888777777766689999987432 344444432 3 23445663 3455 88999886 55
Q ss_pred ccc-cCh-hhhcccccchhh-cccCceEEEe
Q 024173 175 LDY-LSP-KYLNKTLPDLAR-VASDGVLIFA 202 (271)
Q Consensus 175 LDy-Lsp-ryLNkTLPeLaR-vsadglViF~ 202 (271)
+.| +.+ ..+.+.|-++.| +..+|++|+.
T Consensus 138 ~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~ 168 (376)
T 3r0q_C 138 MGYFLLRESMFDSVISARDRWLKPTGVMYPS 168 (376)
T ss_dssp CBTTBTTTCTHHHHHHHHHHHEEEEEEEESS
T ss_pred hhhcccchHHHHHHHHHHHhhCCCCeEEEEe
Confidence 444 332 345556666644 4567777664
No 143
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=85.23 E-value=1.3 Score=36.14 Aligned_cols=93 Identities=9% Similarity=0.062 Sum_probs=59.9
Q ss_pred cceeeecCCchhHhHhhhcc-----ccccccccccccc--cchhHHHHHHHhhceeeeeeecCC--CCCCCC-CccEEEe
Q 024173 102 HKVLHVGPDTCSVVSTLLKE-----EETEAWGVEPYDI--EDADARCKSLVHKGIVRVADIKFP--LPYRAK-SFPLVIV 171 (271)
Q Consensus 102 ~kVLHVGPdtC~VVs~LLkE-----e~tEAWGVEPydi--ed~d~~CKsLvrKGiVRvADIkfp--LPYR~k-SFslViv 171 (271)
.+||-||-.|-.....|.+. ...+..|||..+- +-+. .+-.+=-+..+|+.-. ||+-.. +|++|++
T Consensus 83 ~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~----~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I~~ 158 (236)
T 2bm8_A 83 RTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA----SDMENITLHQGDCSDLTTFEHLREMAHPLIFI 158 (236)
T ss_dssp SEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG----GGCTTEEEEECCSSCSGGGGGGSSSCSSEEEE
T ss_pred CEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh----ccCCceEEEECcchhHHHHHhhccCCCCEEEE
Confidence 58999999988777666654 4678999997652 3232 2211223566787654 565443 7999876
Q ss_pred cccccccChhhhcccccchhh--cccCceEEEec
Q 024173 172 SDALDYLSPKYLNKTLPDLAR--VASDGVLIFAG 203 (271)
Q Consensus 172 SDaLDyLspryLNkTLPeLaR--vsadglViF~G 203 (271)
..+ +. .+-+.|-++.| +...|++++.-
T Consensus 159 d~~--~~---~~~~~l~~~~r~~LkpGG~lv~~d 187 (236)
T 2bm8_A 159 DNA--HA---NTFNIMKWAVDHLLEEGDYFIIED 187 (236)
T ss_dssp ESS--CS---SHHHHHHHHHHHTCCTTCEEEECS
T ss_pred CCc--hH---hHHHHHHHHHHhhCCCCCEEEEEe
Confidence 443 22 22346777775 77889999864
No 144
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=85.04 E-value=0.81 Score=39.82 Aligned_cols=117 Identities=20% Similarity=0.197 Sum_probs=65.4
Q ss_pred HHHHhHhHHHHHHhcccccceeeecCCchhHhHhhhccc-cccccccccccccchhHHHHHHHhh---c------eeeee
Q 024173 84 SEIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLVHK---G------IVRVA 153 (271)
Q Consensus 84 ~eV~~AiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEPydied~d~~CKsLvrK---G------iVRvA 153 (271)
.|.+..+|.+.. ..-++||.||-.+..+...|++.. ..+..+||.-+ ++-..|+.-..+ | -+.++
T Consensus 95 ~e~l~~l~l~~~---~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~--~~i~~Ar~~~~~~~~~~~~~rv~~~~~ 169 (314)
T 2b2c_A 95 QEMLAHLPMFAH---PDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDE--MVIDVAKKFLPGMSCGFSHPKLDLFCG 169 (314)
T ss_dssp HHHHHHHHHHHS---SSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCH--HHHHHHHHHCTTTSGGGGCTTEEEECS
T ss_pred HHHHHHHHHhhC---CCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCH--HHHHHHHHHHHHhccccCCCCEEEEEC
Confidence 466666665432 234789999999999999999863 45667776532 122333333221 2 24556
Q ss_pred eecCCCCCCCCCccEEEecccccccChh-hh--cccccchhh-cccCceEEEe-cCCC
Q 024173 154 DIKFPLPYRAKSFPLVIVSDALDYLSPK-YL--NKTLPDLAR-VASDGVLIFA-GYPG 206 (271)
Q Consensus 154 DIkfpLPYR~kSFslVivSDaLDyLspr-yL--NkTLPeLaR-vsadglViF~-G~Pg 206 (271)
|..-.|+....+|++||+ |+.|.+.|. .| ...+-++.| +..+|++++. |.|-
T Consensus 170 D~~~~l~~~~~~fD~Ii~-d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~~~~~ 226 (314)
T 2b2c_A 170 DGFEFLKNHKNEFDVIIT-DSSDPVGPAESLFGQSYYELLRDALKEDGILSSQGESVW 226 (314)
T ss_dssp CHHHHHHHCTTCEEEEEE-CCC-------------HHHHHHHHEEEEEEEEEECCCTT
T ss_pred hHHHHHHhcCCCceEEEE-cCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEECCCcc
Confidence 764334445678998885 777665442 12 334444444 4677887775 3554
No 145
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=84.75 E-value=0.63 Score=36.20 Aligned_cols=96 Identities=15% Similarity=0.066 Sum_probs=58.7
Q ss_pred cceeeecCCchhHhHhhhccc------ccccccccccc--ccchhHHHHHHH------hhceeeeeeecCCCC---CCCC
Q 024173 102 HKVLHVGPDTCSVVSTLLKEE------ETEAWGVEPYD--IEDADARCKSLV------HKGIVRVADIKFPLP---YRAK 164 (271)
Q Consensus 102 ~kVLHVGPdtC~VVs~LLkEe------~tEAWGVEPyd--ied~d~~CKsLv------rKGiVRvADIkfpLP---YR~k 164 (271)
.+||-||-.+......|.+.- +.+..|||+.+ ++-+..+++..- .+=-+..+|+.-.+| ....
T Consensus 82 ~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~ 161 (227)
T 2pbf_A 82 SRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKKELG 161 (227)
T ss_dssp CEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHHHHC
T ss_pred CEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCccCC
Confidence 589999999977766666543 35889998754 333444443321 111244566654331 3456
Q ss_pred CccEEEecccccccChhhhcccccchhh-cccCceEEEecCC
Q 024173 165 SFPLVIVSDALDYLSPKYLNKTLPDLAR-VASDGVLIFAGYP 205 (271)
Q Consensus 165 SFslVivSDaLDyLspryLNkTLPeLaR-vsadglViF~G~P 205 (271)
+|++|++...+..+ +.++.+ +..+|.++++-.|
T Consensus 162 ~fD~I~~~~~~~~~--------~~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 162 LFDAIHVGASASEL--------PEILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp CEEEEEECSBBSSC--------CHHHHHHEEEEEEEEEEEEE
T ss_pred CcCEEEECCchHHH--------HHHHHHhcCCCcEEEEEEcc
Confidence 89999998887654 344444 4567777776544
No 146
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=84.53 E-value=1.2 Score=33.90 Aligned_cols=90 Identities=14% Similarity=0.033 Sum_probs=50.3
Q ss_pred ccceeeecCCchhHhHhhhcccccccccccccc--ccchhHHHHHHHhhceeeeeeecCCCCCCCCCccEEEeccccccc
Q 024173 101 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDALDYL 178 (271)
Q Consensus 101 M~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvrKGiVRvADIkfpLPYR~kSFslVivSDaLDyL 178 (271)
-.+||-+|..+..+...|.+....+..|||..+ ++.+..+.+..--+--+..+|+.- +| .+|++||..-.....
T Consensus 50 ~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~-~~---~~~D~v~~~~p~~~~ 125 (207)
T 1wy7_A 50 GKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSE-FN---SRVDIVIMNPPFGSQ 125 (207)
T ss_dssp TCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGG-CC---CCCSEEEECCCCSSS
T ss_pred cCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHH-cC---CCCCEEEEcCCCccc
Confidence 358999999999888777776555788888642 233333332210012344566643 33 489988865443333
Q ss_pred Chhhhcccccchhhcc
Q 024173 179 SPKYLNKTLPDLARVA 194 (271)
Q Consensus 179 spryLNkTLPeLaRvs 194 (271)
+..-..+.|-++.|+.
T Consensus 126 ~~~~~~~~l~~~~~~l 141 (207)
T 1wy7_A 126 RKHADRPFLLKAFEIS 141 (207)
T ss_dssp STTTTHHHHHHHHHHC
T ss_pred cCCchHHHHHHHHHhc
Confidence 3222223344555665
No 147
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=84.45 E-value=0.86 Score=35.76 Aligned_cols=95 Identities=14% Similarity=0.093 Sum_probs=56.1
Q ss_pred ccceeeecCCchhHhHhhhcc-c-ccccccccccc--ccchhHHHHHH-H-hhceeeeeeecCCCCCCCCCccEEEeccc
Q 024173 101 MHKVLHVGPDTCSVVSTLLKE-E-ETEAWGVEPYD--IEDADARCKSL-V-HKGIVRVADIKFPLPYRAKSFPLVIVSDA 174 (271)
Q Consensus 101 M~kVLHVGPdtC~VVs~LLkE-e-~tEAWGVEPyd--ied~d~~CKsL-v-rKGiVRvADIkfpLPYR~kSFslVivSDa 174 (271)
-.+||.+|-.+......|++. . ..+..|+|+.+ ++-+..+++.. - .+=-+..+|+.- +|+...+|++|+. |.
T Consensus 97 ~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~-~~~~~~~~D~v~~-~~ 174 (258)
T 2pwy_A 97 GMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEE-AELEEAAYDGVAL-DL 174 (258)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGG-CCCCTTCEEEEEE-ES
T ss_pred CCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhh-cCCCCCCcCEEEE-CC
Confidence 358999999998887777765 2 56788887532 33333333221 0 011234456642 3555678999986 32
Q ss_pred ccccChhhhcccccchhhc-ccCceEEEec
Q 024173 175 LDYLSPKYLNKTLPDLARV-ASDGVLIFAG 203 (271)
Q Consensus 175 LDyLspryLNkTLPeLaRv-sadglViF~G 203 (271)
....+.|.++.|+ ..+|.+++..
T Consensus 175 ------~~~~~~l~~~~~~L~~gG~l~~~~ 198 (258)
T 2pwy_A 175 ------MEPWKVLEKAALALKPDRFLVAYL 198 (258)
T ss_dssp ------SCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred ------cCHHHHHHHHHHhCCCCCEEEEEe
Confidence 2234667777775 4566666655
No 148
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=84.39 E-value=0.62 Score=36.34 Aligned_cols=96 Identities=15% Similarity=0.162 Sum_probs=58.4
Q ss_pred cceeeecCCchhHhHhhhcc--cccccccccccc--ccchhHHHHHHHhhceeeeeeecCCCCC--CCCCccEEEecccc
Q 024173 102 HKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPY--RAKSFPLVIVSDAL 175 (271)
Q Consensus 102 ~kVLHVGPdtC~VVs~LLkE--e~tEAWGVEPyd--ied~d~~CKsLvrKGiVRvADIkfpLPY--R~kSFslVivSDaL 175 (271)
.+||-+|..+......|.+. ...+..|||+.+ ++++..+++.. ..=-+..+|+.-+..+ -..+|++|+ +|..
T Consensus 75 ~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~D~v~-~~~~ 152 (227)
T 1g8a_A 75 KSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER-RNIVPILGDATKPEEYRALVPKVDVIF-EDVA 152 (227)
T ss_dssp CEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC-TTEEEEECCTTCGGGGTTTCCCEEEEE-ECCC
T ss_pred CEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc-CCCEEEEccCCCcchhhcccCCceEEE-ECCC
Confidence 47999999998877777654 246788987654 23444455443 1222456777654322 235899988 4543
Q ss_pred cccChhhhcccccchhhc-ccCceEEEe
Q 024173 176 DYLSPKYLNKTLPDLARV-ASDGVLIFA 202 (271)
Q Consensus 176 DyLspryLNkTLPeLaRv-sadglViF~ 202 (271)
.|......+.++.|+ ..+|.++++
T Consensus 153 ---~~~~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 153 ---QPTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp ---STTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ---CHhHHHHHHHHHHHhcCCCCEEEEE
Confidence 443333336677764 557777776
No 149
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=84.35 E-value=1.1 Score=40.12 Aligned_cols=107 Identities=15% Similarity=0.249 Sum_probs=74.3
Q ss_pred cceeeecCCchhHhHhhhcccccccccccccc--ccchhHHHHHHHhhce----eeeeeecCC---CCCCCCCccEEEec
Q 024173 102 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGI----VRVADIKFP---LPYRAKSFPLVIVS 172 (271)
Q Consensus 102 ~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvrKGi----VRvADIkfp---LPYR~kSFslVivS 172 (271)
.+||-+|-.+-.+--.|.+. ..+.+|||..+ ++++..|.+. .|+ +..+|+.-. +|+...+|++||+
T Consensus 288 ~~VLDlgcG~G~~~~~la~~-~~~V~gvD~s~~al~~A~~n~~~---~~~~~v~f~~~d~~~~l~~~~~~~~~fD~Vv~- 362 (433)
T 1uwv_A 288 DRVLDLFCGMGNFTLPLATQ-AASVVGVEGVPALVEKGQQNARL---NGLQNVTFYHENLEEDVTKQPWAKNGFDKVLL- 362 (433)
T ss_dssp CEEEEESCTTTTTHHHHHTT-SSEEEEEESCHHHHHHHHHHHHH---TTCCSEEEEECCTTSCCSSSGGGTTCCSEEEE-
T ss_pred CEEEECCCCCCHHHHHHHhh-CCEEEEEeCCHHHHHHHHHHHHH---cCCCceEEEECCHHHHhhhhhhhcCCCCEEEE-
Confidence 47999999988877777665 67889998754 5566666543 343 455677544 4566778998875
Q ss_pred ccccccChhh--hcccccchhhcccCceEEEecCCCchhhhHHhhhhcC
Q 024173 173 DALDYLSPKY--LNKTLPDLARVASDGVLIFAGYPGQQRAKVAELSKFG 219 (271)
Q Consensus 173 DaLDyLspry--LNkTLPeLaRvsadglViF~G~Pgqqrakvaelskfg 219 (271)
+|-| +...+..|++...+++|.++-+|.......+.|.+.|
T Consensus 363 ------dPPr~g~~~~~~~l~~~~p~~ivyvsc~p~tlard~~~l~~~G 405 (433)
T 1uwv_A 363 ------DPARAGAAGVMQQIIKLEPIRIVYVSCNPATLARDSEALLKAG 405 (433)
T ss_dssp ------CCCTTCCHHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTT
T ss_pred ------CCCCccHHHHHHHHHhcCCCeEEEEECChHHHHhhHHHHHHCC
Confidence 3444 4455667777888999999999987755555555544
No 150
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=83.43 E-value=1.2 Score=35.73 Aligned_cols=94 Identities=20% Similarity=0.253 Sum_probs=57.5
Q ss_pred cceeeecCCchhHhHhhhcc--cccccccccccc--ccchhHHHHHH----HhhceeeeeeecCCCCCCCCCccEEEecc
Q 024173 102 HKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKSL----VHKGIVRVADIKFPLPYRAKSFPLVIVSD 173 (271)
Q Consensus 102 ~kVLHVGPdtC~VVs~LLkE--e~tEAWGVEPyd--ied~d~~CKsL----vrKGiVRvADIkfpLPYR~kSFslVivSD 173 (271)
.+||-+|-.+-.....|++. ...+..|||..+ ++.+..+++.. ...=-+..+|+.- +|+...+|++||. |
T Consensus 101 ~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~-~~~~~~~~D~v~~-~ 178 (280)
T 1i9g_A 101 ARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLAD-SELPDGSVDRAVL-D 178 (280)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGG-CCCCTTCEEEEEE-E
T ss_pred CEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHh-cCCCCCceeEEEE-C
Confidence 47999999998888888764 356788887532 33344444332 1111244566643 2444678999987 3
Q ss_pred cccccChhhhcccccchhhc-ccCceEEEec
Q 024173 174 ALDYLSPKYLNKTLPDLARV-ASDGVLIFAG 203 (271)
Q Consensus 174 aLDyLspryLNkTLPeLaRv-sadglViF~G 203 (271)
. ..| ...|.++.|+ ..+|.+++..
T Consensus 179 ~---~~~---~~~l~~~~~~L~pgG~l~~~~ 203 (280)
T 1i9g_A 179 M---LAP---WEVLDAVSRLLVAGGVLMVYV 203 (280)
T ss_dssp S---SCG---GGGHHHHHHHEEEEEEEEEEE
T ss_pred C---cCH---HHHHHHHHHhCCCCCEEEEEe
Confidence 2 223 3667777774 5567666655
No 151
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=83.43 E-value=0.95 Score=35.68 Aligned_cols=99 Identities=16% Similarity=0.149 Sum_probs=63.3
Q ss_pred cceeeecCCchhHhHhhhcc--ccccccccccccc--cchhHHHHHHHhhceeeeeeecCC--CCCCCCCccEEEecccc
Q 024173 102 HKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYDI--EDADARCKSLVHKGIVRVADIKFP--LPYRAKSFPLVIVSDAL 175 (271)
Q Consensus 102 ~kVLHVGPdtC~VVs~LLkE--e~tEAWGVEPydi--ed~d~~CKsLvrKGiVRvADIkfp--LPYR~kSFslVivSDaL 175 (271)
.+||-+|-.|-.....|++. ...+..|||+.+- +++-.+++.. ..=-+..+|+.-+ +|.-..+|++|+. |..
T Consensus 79 ~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~-~~v~~~~~d~~~~~~~~~~~~~~D~V~~-~~~ 156 (233)
T 2ipx_A 79 AKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR-TNIIPVIEDARHPHKYRMLIAMVDVIFA-DVA 156 (233)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC-TTEEEECSCTTCGGGGGGGCCCEEEEEE-CCC
T ss_pred CEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc-CCeEEEEcccCChhhhcccCCcEEEEEE-cCC
Confidence 48999999998888888876 3468899987642 4455555543 1112455777653 4555679999886 443
Q ss_pred cccChhhhcccccchhhc-ccCceEEEecCC
Q 024173 176 DYLSPKYLNKTLPDLARV-ASDGVLIFAGYP 205 (271)
Q Consensus 176 DyLspryLNkTLPeLaRv-sadglViF~G~P 205 (271)
.|......+.++.|+ ..+|.++++=.|
T Consensus 157 ---~~~~~~~~~~~~~~~LkpgG~l~i~~~~ 184 (233)
T 2ipx_A 157 ---QPDQTRIVALNAHTFLRNGGHFVISIKA 184 (233)
T ss_dssp ---CTTHHHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred ---CccHHHHHHHHHHHHcCCCeEEEEEEcc
Confidence 444333346666654 567777775343
No 152
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=83.33 E-value=1.5 Score=34.06 Aligned_cols=97 Identities=15% Similarity=0.187 Sum_probs=59.0
Q ss_pred ccceeeecCCchhHhHhhhccc--ccccccccccc--ccchhHHHHHH------HhhceeeeeeecCCCCCCCCCccEEE
Q 024173 101 MHKVLHVGPDTCSVVSTLLKEE--ETEAWGVEPYD--IEDADARCKSL------VHKGIVRVADIKFPLPYRAKSFPLVI 170 (271)
Q Consensus 101 M~kVLHVGPdtC~VVs~LLkEe--~tEAWGVEPyd--ied~d~~CKsL------vrKGiVRvADIkfpLPYR~kSFslVi 170 (271)
-.+||.+|-.+-.....|.+.- ..+..|||+.+ ++-+..+++.. ..+=-+..+|+.-. +....+|++|+
T Consensus 78 ~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~fD~i~ 156 (226)
T 1i1n_A 78 GAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMG-YAEEAPYDAIH 156 (226)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGC-CGGGCCEEEEE
T ss_pred CCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccC-cccCCCcCEEE
Confidence 3589999999987776666542 25788888653 34444444432 11112455676533 22356799999
Q ss_pred ecccccccChhhhcccccchhh-cccCceEEEecCCC
Q 024173 171 VSDALDYLSPKYLNKTLPDLAR-VASDGVLIFAGYPG 206 (271)
Q Consensus 171 vSDaLDyLspryLNkTLPeLaR-vsadglViF~G~Pg 206 (271)
+...+..+ +.++.| +..+|.++++-.|.
T Consensus 157 ~~~~~~~~--------~~~~~~~LkpgG~lv~~~~~~ 185 (226)
T 1i1n_A 157 VGAAAPVV--------PQALIDQLKPGGRLILPVGPA 185 (226)
T ss_dssp ECSBBSSC--------CHHHHHTEEEEEEEEEEESCT
T ss_pred ECCchHHH--------HHHHHHhcCCCcEEEEEEecC
Confidence 88877543 234444 45678887765553
No 153
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=83.28 E-value=1.4 Score=35.36 Aligned_cols=117 Identities=17% Similarity=0.157 Sum_probs=70.6
Q ss_pred cccceeeecCCchhHhHhhhccc-ccccccccccc--ccchhHHHHHHHhh-----ce----eeeeeecCCCC--CCCCC
Q 024173 100 SMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYD--IEDADARCKSLVHK-----GI----VRVADIKFPLP--YRAKS 165 (271)
Q Consensus 100 sM~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEPyd--ied~d~~CKsLvrK-----Gi----VRvADIkfpLP--YR~kS 165 (271)
.-.+||-||-.+-.....|.+.. +.+..|||..+ ++-+..+++.+-+. |+ +..+|+.-.|| +...+
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~ 128 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQ 128 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTC
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccccc
Confidence 45689999999999988888765 56899999764 34455565554211 32 45578765577 77889
Q ss_pred ccEEEecccccccChhhh----------cccccchhhc-ccCceEEEec-CCCchhhhHHhhhhcCC
Q 024173 166 FPLVIVSDALDYLSPKYL----------NKTLPDLARV-ASDGVLIFAG-YPGQQRAKVAELSKFGR 220 (271)
Q Consensus 166 FslVivSDaLDyLspryL----------NkTLPeLaRv-sadglViF~G-~Pgqqrakvaelskfgr 220 (271)
|+.|++.+ -.|-+- -..|.+++|+ ..+|+++++. ...........+...|+
T Consensus 129 ~d~v~~~~----p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~~~ 191 (246)
T 2vdv_E 129 LSKMFFCF----PDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITDVKDLHEWMVKHLEEHPL 191 (246)
T ss_dssp EEEEEEES----CCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHHSTT
T ss_pred cCEEEEEC----CCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEeccHHHHHHHHHHHHhCcC
Confidence 99998543 223111 1234445554 4567777744 43333333445555554
No 154
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=83.05 E-value=1.8 Score=34.89 Aligned_cols=112 Identities=15% Similarity=0.143 Sum_probs=70.4
Q ss_pred HHHHhcccccceeeecCCchhHhHhhhccc-ccccccccccc--ccchhHHHHHHHhhce--ee--eeeecCCCC--CCC
Q 024173 93 LKKAYGDSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYD--IEDADARCKSLVHKGI--VR--VADIKFPLP--YRA 163 (271)
Q Consensus 93 LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEPyd--ied~d~~CKsLvrKGi--VR--vADIkfpLP--YR~ 163 (271)
+.+.||..-..||-||-.+-.....|.+.. +....|||+++ ++.+-.++ .+.|+ |+ .+|+.-.|| +..
T Consensus 27 ~~~~f~~~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~---~~~~l~nv~~~~~Da~~~l~~~~~~ 103 (218)
T 3dxy_A 27 FPALFGREAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASA---HEEGLSNLRVMCHDAVEVLHKMIPD 103 (218)
T ss_dssp HHHHHSSCCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHH---HHTTCSSEEEECSCHHHHHHHHSCT
T ss_pred HHHHcCCCCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHH---HHhCCCcEEEEECCHHHHHHHHcCC
Confidence 567788888899999999988888777654 56799999874 22233333 23343 33 356543333 557
Q ss_pred CCccEEEecccccccChhhhc------ccccchhh-cccCceEEEecCCCc
Q 024173 164 KSFPLVIVSDALDYLSPKYLN------KTLPDLAR-VASDGVLIFAGYPGQ 207 (271)
Q Consensus 164 kSFslVivSDaLDyLspryLN------kTLPeLaR-vsadglViF~G~Pgq 207 (271)
.||+.|++.=..-|-..+... ..+.+++| +..+|+++|+-.+.+
T Consensus 104 ~~~d~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~~~ 154 (218)
T 3dxy_A 104 NSLRMVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWEP 154 (218)
T ss_dssp TCEEEEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESCHH
T ss_pred CChheEEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCCHH
Confidence 899999875111122222222 25667777 677888888775544
No 155
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=82.46 E-value=2.4 Score=36.89 Aligned_cols=101 Identities=11% Similarity=0.032 Sum_probs=60.5
Q ss_pred ccceeeecCCchhHhHhhhcccc-cccccccc--ccccchhHHHHHHHhhce----eeeeeecCCCCC-CCCCccEEEec
Q 024173 101 MHKVLHVGPDTCSVVSTLLKEEE-TEAWGVEP--YDIEDADARCKSLVHKGI----VRVADIKFPLPY-RAKSFPLVIVS 172 (271)
Q Consensus 101 M~kVLHVGPdtC~VVs~LLkEe~-tEAWGVEP--ydied~d~~CKsLvrKGi----VRvADIkfpLPY-R~kSFslVivS 172 (271)
-.+||-+| .|-.+.-.|.+... .+..|||. --++-+..|++. .|+ +..+|+.-+||- -..+|++||+.
T Consensus 173 ~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~---~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~ 248 (373)
T 2qm3_A 173 NKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANE---IGYEDIEIFTFDLRKPLPDYALHKFDTFITD 248 (373)
T ss_dssp TCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHH---HTCCCEEEECCCTTSCCCTTTSSCBSEEEEC
T ss_pred CCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHH---cCCCCEEEEEChhhhhchhhccCCccEEEEC
Confidence 46899999 98877666665543 67888874 334445555443 354 456888777875 35689998864
Q ss_pred ccccccChhhhcccccchhhccc-Cc-eEEEecCC--Cch
Q 024173 173 DALDYLSPKYLNKTLPDLARVAS-DG-VLIFAGYP--GQQ 208 (271)
Q Consensus 173 DaLDyLspryLNkTLPeLaRvsa-dg-lViF~G~P--gqq 208 (271)
-..- +.-+.+-|.+..|+-. +| +++|+=.+ ++.
T Consensus 249 ~p~~---~~~~~~~l~~~~~~LkpgG~~~~~~~~~~~~~~ 285 (373)
T 2qm3_A 249 PPET---LEAIRAFVGRGIATLKGPRCAGYFGITRRESSL 285 (373)
T ss_dssp CCSS---HHHHHHHHHHHHHTBCSTTCEEEEEECTTTCCH
T ss_pred CCCc---hHHHHHHHHHHHHHcccCCeEEEEEEecCcCCH
Confidence 2111 1113444556666654 47 54555443 554
No 156
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=81.78 E-value=2 Score=36.14 Aligned_cols=109 Identities=19% Similarity=0.120 Sum_probs=60.3
Q ss_pred cceeeecCCchhHhHhhhcc-c-ccccccccccc--ccchhHHHHHHH------------hhceeeeeeecCCC-CCCCC
Q 024173 102 HKVLHVGPDTCSVVSTLLKE-E-ETEAWGVEPYD--IEDADARCKSLV------------HKGIVRVADIKFPL-PYRAK 164 (271)
Q Consensus 102 ~kVLHVGPdtC~VVs~LLkE-e-~tEAWGVEPyd--ied~d~~CKsLv------------rKGiVRvADIkfpL-PYR~k 164 (271)
.+||-+|-.+-.....|++. . ..+..|||..+ ++-+..+.+.+- ..=-+..+|+.-.+ ++...
T Consensus 107 ~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~~~~~ 186 (336)
T 2b25_A 107 DTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATEDIKSL 186 (336)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC------
T ss_pred CEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcccccCCC
Confidence 48999999998877777765 2 27889988654 334444444321 11124556765433 45566
Q ss_pred CccEEEecccccccChhhhcccccchhhccc-CceEEEe-cCCCchhhhHHhhhh
Q 024173 165 SFPLVIVSDALDYLSPKYLNKTLPDLARVAS-DGVLIFA-GYPGQQRAKVAELSK 217 (271)
Q Consensus 165 SFslVivSDaLDyLspryLNkTLPeLaRvsa-dglViF~-G~Pgqqrakvaelsk 217 (271)
+|++||. |.. .|. ..|+++.|+=. +|.+++. +...|...-+..+.+
T Consensus 187 ~fD~V~~-~~~---~~~---~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~ 234 (336)
T 2b25_A 187 TFDAVAL-DML---NPH---VTLPVFYPHLKHGGVCAVYVVNITQVIELLDGIRT 234 (336)
T ss_dssp -EEEEEE-CSS---STT---TTHHHHGGGEEEEEEEEEEESSHHHHHHHHHHHHH
T ss_pred CeeEEEE-CCC---CHH---HHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHh
Confidence 8999886 433 332 26777777644 5555543 455555444454544
No 157
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=81.73 E-value=8.1 Score=33.41 Aligned_cols=145 Identities=10% Similarity=0.093 Sum_probs=89.5
Q ss_pred HHHHHHhc--ccccceeeecCCchhHhHhhhccc-cccccccccccccchhHHHHHHHhhceeeeeeecCCCCCCCCCcc
Q 024173 91 PILKKAYG--DSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFP 167 (271)
Q Consensus 91 P~LkkaYG--dsM~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEPydied~d~~CKsLvrKGiVRvADIkfpLPYR~kSFs 167 (271)
+-+-+.|. +.-.+||-||-.|-.....|++.- +.+.-++ |+..+-...+.. .+=-+...|+--|+| +. +
T Consensus 190 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~---D~~~~~~~a~~~-~~v~~~~~D~~~~~p---~~-D 261 (364)
T 3p9c_A 190 KKLLELYHGFEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNF---DLPHVISEAPQF-PGVTHVGGDMFKEVP---SG-D 261 (364)
T ss_dssp HHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEE---ECHHHHTTCCCC-TTEEEEECCTTTCCC---CC-S
T ss_pred HHHHHhcccccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEe---cCHHHHHhhhhc-CCeEEEeCCcCCCCC---CC-C
Confidence 44445553 345789999999999998888753 3344343 333222222211 111234467644777 23 9
Q ss_pred EEEecccccccChhhhcccccchhhc-ccCceEEEec--CCCch-------hhhHHhhhhc--CCccccccchhHHHHHH
Q 024173 168 LVIVSDALDYLSPKYLNKTLPDLARV-ASDGVLIFAG--YPGQQ-------RAKVAELSKF--GRPAKMRSSSWWIRYFV 235 (271)
Q Consensus 168 lVivSDaLDyLspryLNkTLPeLaRv-sadglViF~G--~Pgqq-------rakvaelskf--grpaK~rsssWW~r~F~ 235 (271)
+|+.+.+|.++++...-+.|-++.|+ ..+|.+++.- .|.+. -....++.-. --..+.|+...|.+.|.
T Consensus 262 ~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~m~~~~~~g~~rt~~e~~~ll~ 341 (364)
T 3p9c_A 262 TILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCILPVNPEANPSSQGVFHVDMIMLAHNPGGRERYEREFQALAR 341 (364)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSCCSSHHHHHHHHHHHHHHHHCSSCCCCBHHHHHHHHH
T ss_pred EEEehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCcchhhhhHHHhHHHHHhcccCCccCCHHHHHHHHH
Confidence 99999999999988888888888886 4577676643 23221 0112233222 13457788999999999
Q ss_pred Hhccccch
Q 024173 236 QTSLEENE 243 (271)
Q Consensus 236 qt~LeEnE 243 (271)
++|++.-+
T Consensus 342 ~AGF~~v~ 349 (364)
T 3p9c_A 342 GAGFTGVK 349 (364)
T ss_dssp HTTCCEEE
T ss_pred HCCCceEE
Confidence 99987543
No 158
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=81.62 E-value=1.2 Score=37.50 Aligned_cols=114 Identities=18% Similarity=0.187 Sum_probs=66.4
Q ss_pred HHHHhHhHHHHHHhcccccceeeecCCchhHhHhhhccc-cccccccccccccchhHHHHHHHh---------hceeeee
Q 024173 84 SEIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLVH---------KGIVRVA 153 (271)
Q Consensus 84 ~eV~~AiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEPydied~d~~CKsLvr---------KGiVRvA 153 (271)
.|.+..+|.+.- ..-.+||.+|-.++.+...+++.. ..+.-+||.-+ ++-..|+.-.. +=-+.++
T Consensus 65 ~e~l~~~~l~~~---~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~--~~i~~a~~~~~~~~~~~~~~~v~~~~~ 139 (283)
T 2i7c_A 65 HEMMTHVPMTVS---KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDE--TVIEVSKIYFKNISCGYEDKRVNVFIE 139 (283)
T ss_dssp HHHHHHHHHTTS---SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCH--HHHHHHHHHCTTTSGGGGSTTEEEEES
T ss_pred HHHHHHHHHhcC---CCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCH--HHHHHHHHHhHHhccccCCCcEEEEEC
Confidence 455566665421 234789999999999999999764 35666666432 12233333221 1135566
Q ss_pred eecCCCCCCCCCccEEEecccccccChh-hh--cccccchhh-cccCceEEEec
Q 024173 154 DIKFPLPYRAKSFPLVIVSDALDYLSPK-YL--NKTLPDLAR-VASDGVLIFAG 203 (271)
Q Consensus 154 DIkfpLPYR~kSFslVivSDaLDyLspr-yL--NkTLPeLaR-vsadglViF~G 203 (271)
|..--++-...+|++||+ |+.|...|. .| ...+-++.| +..+|++++..
T Consensus 140 D~~~~l~~~~~~fD~Ii~-d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 192 (283)
T 2i7c_A 140 DASKFLENVTNTYDVIIV-DSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 192 (283)
T ss_dssp CHHHHHHHCCSCEEEEEE-ECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEEC
T ss_pred ChHHHHHhCCCCceEEEE-cCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEC
Confidence 764334433678999886 665554432 11 233334444 56788888764
No 159
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=80.99 E-value=1.2 Score=35.63 Aligned_cols=106 Identities=12% Similarity=0.069 Sum_probs=61.8
Q ss_pred cccceeeecCCchhHhHhhhcc---ccccccccccc--cccchhHHHHHH------------------------------
Q 024173 100 SMHKVLHVGPDTCSVVSTLLKE---EETEAWGVEPY--DIEDADARCKSL------------------------------ 144 (271)
Q Consensus 100 sM~kVLHVGPdtC~VVs~LLkE---e~tEAWGVEPy--died~d~~CKsL------------------------------ 144 (271)
.-.+||-+|=.|-.+.-.|.+. ...+..|||.- -++-+..+.+..
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQA 130 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhh
Confidence 3468999999998877776654 35678888643 233344443322
Q ss_pred ---Hhhce----------eeeeeecCCCCC----CCCCccEEEecccccccCh-------hhhcccccchhh-cccCceE
Q 024173 145 ---VHKGI----------VRVADIKFPLPY----RAKSFPLVIVSDALDYLSP-------KYLNKTLPDLAR-VASDGVL 199 (271)
Q Consensus 145 ---vrKGi----------VRvADIkfpLPY----R~kSFslVivSDaLDyLsp-------ryLNkTLPeLaR-vsadglV 199 (271)
|+.++ +..+|+.-+++. ...+|++||..-.+-+... ..+.+.+.++.| +..+|++
T Consensus 131 ~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l 210 (250)
T 1o9g_A 131 ARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAVI 210 (250)
T ss_dssp HHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCEE
T ss_pred hhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcEE
Confidence 22111 566787655542 3458998876433333221 223344555555 5678999
Q ss_pred EEecCC
Q 024173 200 IFAGYP 205 (271)
Q Consensus 200 iF~G~P 205 (271)
+|++..
T Consensus 211 ~~~~~~ 216 (250)
T 1o9g_A 211 AVTDRS 216 (250)
T ss_dssp EEEESS
T ss_pred EEeCcc
Confidence 997754
No 160
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=80.98 E-value=2.4 Score=32.66 Aligned_cols=101 Identities=17% Similarity=0.124 Sum_probs=56.1
Q ss_pred cccceeeecCCchhHhHhhhccc-ccccccccccc--ccchhHHHH-HHHhhc----eeeeeeecCCCCCCCCCccEEEe
Q 024173 100 SMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYD--IEDADARCK-SLVHKG----IVRVADIKFPLPYRAKSFPLVIV 171 (271)
Q Consensus 100 sM~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEPyd--ied~d~~CK-sLvrKG----iVRvADIkfpLPYR~kSFslViv 171 (271)
.-.+||-||-.|......|.+.. ..+..|||+.+ ++.+-...+ ..-+.| -+..+|+.- +|+-..+ ..|.+
T Consensus 27 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~-l~~~~~~-d~v~~ 104 (218)
T 3mq2_A 27 YDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAER-LPPLSGV-GELHV 104 (218)
T ss_dssp SSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTT-CCSCCCE-EEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhh-CCCCCCC-CEEEE
Confidence 34579999999999888887754 67899998765 221211111 111233 345677754 6665444 54441
Q ss_pred cccccccChhhh---cccccchhhc-ccCceEEEe
Q 024173 172 SDALDYLSPKYL---NKTLPDLARV-ASDGVLIFA 202 (271)
Q Consensus 172 SDaLDyLspryL---NkTLPeLaRv-sadglViF~ 202 (271)
.=...-+-..++ .+.|.++.|+ ..+|.++++
T Consensus 105 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 139 (218)
T 3mq2_A 105 LMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVA 139 (218)
T ss_dssp ESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEE
T ss_pred EccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEE
Confidence 110000000111 5667788886 456777764
No 161
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=80.65 E-value=1.6 Score=34.97 Aligned_cols=94 Identities=17% Similarity=0.139 Sum_probs=56.8
Q ss_pred cceeeecCCchhHhHhhhccc-cccccccccccc--cchhHHHHHHHhhce-eeeeeecCC---CCCCCCCccEEEeccc
Q 024173 102 HKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDI--EDADARCKSLVHKGI-VRVADIKFP---LPYRAKSFPLVIVSDA 174 (271)
Q Consensus 102 ~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEPydi--ed~d~~CKsLvrKGi-VRvADIkfp---LPYR~kSFslVivSDa 174 (271)
.+||-+|-.|-.....|.+.- ..+.+|||+.+- +..-..++.. .++ ..++|+.-+ +|.. .+|++|+. |.
T Consensus 59 ~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~--~~v~~~~~d~~~~~~~~~~~-~~fD~V~~-~~ 134 (210)
T 1nt2_A 59 ERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRER--NNIIPLLFDASKPWKYSGIV-EKVDLIYQ-DI 134 (210)
T ss_dssp CEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHC--SSEEEECSCTTCGGGTTTTC-CCEEEEEE-CC
T ss_pred CEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcC--CCeEEEEcCCCCchhhcccc-cceeEEEE-ec
Confidence 479999999987766655432 468899987752 2333344432 222 235687765 4443 78999875 43
Q ss_pred ccccChhhhcccccchhhc-ccCceEEEe
Q 024173 175 LDYLSPKYLNKTLPDLARV-ASDGVLIFA 202 (271)
Q Consensus 175 LDyLspryLNkTLPeLaRv-sadglViF~ 202 (271)
..|......|.++.|+ ..+|.++++
T Consensus 135 ---~~~~~~~~~l~~~~r~LkpgG~l~i~ 160 (210)
T 1nt2_A 135 ---AQKNQIEILKANAEFFLKEKGEVVIM 160 (210)
T ss_dssp ---CSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ---cChhHHHHHHHHHHHHhCCCCEEEEE
Confidence 2232222336777775 556777776
No 162
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=80.52 E-value=3.6 Score=33.46 Aligned_cols=94 Identities=11% Similarity=0.129 Sum_probs=55.9
Q ss_pred cceeeecCCchhHhHhhhcc-c-ccccccccccc--ccchhHHHHHHH--hhceeeeeeecCCCCCCCCCccEEEecccc
Q 024173 102 HKVLHVGPDTCSVVSTLLKE-E-ETEAWGVEPYD--IEDADARCKSLV--HKGIVRVADIKFPLPYRAKSFPLVIVSDAL 175 (271)
Q Consensus 102 ~kVLHVGPdtC~VVs~LLkE-e-~tEAWGVEPyd--ied~d~~CKsLv--rKGiVRvADIkfpLPYR~kSFslVivSDaL 175 (271)
.+||-+|-.+......|++. . ..+..|+|..+ ++-+..+.+..- .+=-+...|+.-.+ ...+|++|+. |
T Consensus 114 ~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~~~~~D~V~~-~-- 188 (277)
T 1o54_A 114 DRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGF--DEKDVDALFL-D-- 188 (277)
T ss_dssp CEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCC--SCCSEEEEEE-C--
T ss_pred CEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHcc--cCCccCEEEE-C--
Confidence 48999999998777777765 3 56788887543 333333333221 11124456665443 3468999886 3
Q ss_pred cccChhhhcccccchhhc-ccCceEEEecC
Q 024173 176 DYLSPKYLNKTLPDLARV-ASDGVLIFAGY 204 (271)
Q Consensus 176 DyLspryLNkTLPeLaRv-sadglViF~G~ 204 (271)
|.+..+.|.++.|+ ..+|.+++.-.
T Consensus 189 ----~~~~~~~l~~~~~~L~pgG~l~~~~~ 214 (277)
T 1o54_A 189 ----VPDPWNYIDKCWEALKGGGRFATVCP 214 (277)
T ss_dssp ----CSCGGGTHHHHHHHEEEEEEEEEEES
T ss_pred ----CcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 33445667777765 45666666553
No 163
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=79.63 E-value=1 Score=38.53 Aligned_cols=102 Identities=16% Similarity=0.182 Sum_probs=67.3
Q ss_pred cceeeecCCchhHhHhhhcccccccccccccc--ccchhHHHHHHHhhc-------eeeeeeec-------CCCCCCCCC
Q 024173 102 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKG-------IVRVADIK-------FPLPYRAKS 165 (271)
Q Consensus 102 ~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvrKG-------iVRvADIk-------fpLPYR~kS 165 (271)
.+||-||=.|-....++++....+..||++.+ |+.|....+..-.+. -.+++|+. .+-|+-..+
T Consensus 50 ~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~~~ 129 (302)
T 2vdw_A 50 RKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYFGK 129 (302)
T ss_dssp CEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCSSC
T ss_pred CeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccccCCC
Confidence 57999998887777778877667888988764 344444443321110 13466661 222344679
Q ss_pred ccEEEeccccccc-Chhhhcccccchhhcc-cCceEEEec
Q 024173 166 FPLVIVSDALDYL-SPKYLNKTLPDLARVA-SDGVLIFAG 203 (271)
Q Consensus 166 FslVivSDaLDyL-spryLNkTLPeLaRvs-adglViF~G 203 (271)
|++|+...+|-|+ ++.-..+.|-+++|+= .+|++|++-
T Consensus 130 FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~ 169 (302)
T 2vdw_A 130 FNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITT 169 (302)
T ss_dssp EEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 9999999999886 4445578999999965 456666654
No 164
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=79.42 E-value=0.57 Score=34.69 Aligned_cols=104 Identities=12% Similarity=0.083 Sum_probs=62.0
Q ss_pred ccceeeecCCchhHhHhhhcccccccccccccc--ccchhHHHHHHH--hhceeeeeeecCC---CCCCCCCccEEEecc
Q 024173 101 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV--HKGIVRVADIKFP---LPYRAKSFPLVIVSD 173 (271)
Q Consensus 101 M~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLv--rKGiVRvADIkfp---LPYR~kSFslVivSD 173 (271)
-.+||-+|-.+......+++....+..|||..+ ++.+..+++..- .+--+..+|+.-. +|....+|++|+...
T Consensus 45 ~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~~~ 124 (187)
T 2fhp_A 45 GGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVLLDP 124 (187)
T ss_dssp SCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEEECC
Confidence 358999999999888878876667899998653 334444443321 1123556676433 233467899888644
Q ss_pred cccccChhhhcccccch--hh-cccCceEEEecCCCc
Q 024173 174 ALDYLSPKYLNKTLPDL--AR-VASDGVLIFAGYPGQ 207 (271)
Q Consensus 174 aLDyLspryLNkTLPeL--aR-vsadglViF~G~Pgq 207 (271)
. |. .....+.+-.+ .| +..+|++++.-.+.+
T Consensus 125 ~--~~-~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 158 (187)
T 2fhp_A 125 P--YA-KQEIVSQLEKMLERQLLTNEAVIVCETDKTV 158 (187)
T ss_dssp C--GG-GCCHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred C--CC-chhHHHHHHHHHHhcccCCCCEEEEEeCCcc
Confidence 3 22 22233344444 33 567888887654433
No 165
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=78.83 E-value=2.3 Score=34.44 Aligned_cols=115 Identities=15% Similarity=0.140 Sum_probs=64.3
Q ss_pred hHHHHhHhHHHHHHhcccccceeeecCCchhHhHhhhcc--cccccccccccc--ccchhHHHHHHHhhc--eeeeeeec
Q 024173 83 TSEIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKSLVHKG--IVRVADIK 156 (271)
Q Consensus 83 t~eV~~AiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkE--e~tEAWGVEPyd--ied~d~~CKsLvrKG--iVRvADIk 156 (271)
..+..+.+-.|-...+ -.+||-||-.+-.....|++. ++.+..|||..+ ++-+..+++..--.. -+..+|+.
T Consensus 48 ~~~~~~~l~~l~~~~~--~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~ 125 (248)
T 3tfw_A 48 AANQGQFLALLVRLTQ--AKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPAL 125 (248)
T ss_dssp CHHHHHHHHHHHHHHT--CSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHH
T ss_pred CHHHHHHHHHHHhhcC--CCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHH
Confidence 3444444444433332 368999999998877777665 267888888643 344444444321111 24556764
Q ss_pred CCCCCCC--CCccEEEecccccccChhhhcccccchhhcccCceEEEec
Q 024173 157 FPLPYRA--KSFPLVIVSDALDYLSPKYLNKTLPDLARVASDGVLIFAG 203 (271)
Q Consensus 157 fpLPYR~--kSFslVivSDaLDyLspryLNkTLPeLaRvsadglViF~G 203 (271)
-.+|.-. .+|++|++ |+-.--.+.||+... ..+..+|++|+..
T Consensus 126 ~~l~~~~~~~~fD~V~~-d~~~~~~~~~l~~~~---~~LkpGG~lv~~~ 170 (248)
T 3tfw_A 126 QSLESLGECPAFDLIFI-DADKPNNPHYLRWAL---RYSRPGTLIIGDN 170 (248)
T ss_dssp HHHHTCCSCCCCSEEEE-CSCGGGHHHHHHHHH---HTCCTTCEEEEEC
T ss_pred HHHHhcCCCCCeEEEEE-CCchHHHHHHHHHHH---HhcCCCeEEEEeC
Confidence 4444433 48999986 442112234554443 2345678888765
No 166
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=78.34 E-value=2.1 Score=33.58 Aligned_cols=96 Identities=15% Similarity=0.068 Sum_probs=62.9
Q ss_pred cceeeecCCchhHhHhhhcccccccccccccc--ccchhHHHHHHH--hhceeeeeeecCCCCCCCCCccEEEecccccc
Q 024173 102 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLV--HKGIVRVADIKFPLPYRAKSFPLVIVSDALDY 177 (271)
Q Consensus 102 ~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLv--rKGiVRvADIkfpLPYR~kSFslVivSDaLDy 177 (271)
.+||-+|-.|-.....|.+.. .+.+|||..+ ++-+..+++..- .+--+..+|+.-.. ...+|++|+....+.+
T Consensus 80 ~~vLD~gcG~G~~~~~la~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~D~v~~~~~~~~ 156 (241)
T 3gdh_A 80 DVVVDAFCGVGGNTIQFALTG-MRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA--SFLKADVVFLSPPWGG 156 (241)
T ss_dssp SEEEETTCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG--GGCCCSEEEECCCCSS
T ss_pred CEEEECccccCHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc--ccCCCCEEEECCCcCC
Confidence 579999999998888888764 7888888653 334444444321 12235567764333 3569999997766665
Q ss_pred cChhhhcccccchhhc-ccCceEEEe
Q 024173 178 LSPKYLNKTLPDLARV-ASDGVLIFA 202 (271)
Q Consensus 178 LspryLNkTLPeLaRv-sadglViF~ 202 (271)
+.+..+.+.++.|+ ..+|++|+.
T Consensus 157 --~~~~~~~~~~~~~~L~pgG~~i~~ 180 (241)
T 3gdh_A 157 --PDYATAETFDIRTMMSPDGFEIFR 180 (241)
T ss_dssp --GGGGGSSSBCTTTSCSSCHHHHHH
T ss_pred --cchhhhHHHHHHhhcCCcceeHHH
Confidence 44556688888886 556665543
No 167
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=78.11 E-value=4.2 Score=35.10 Aligned_cols=96 Identities=19% Similarity=0.210 Sum_probs=60.7
Q ss_pred cceeeecCCchhHhHhhhccccccccccccccccchhHHHHHHHh-hce-----eeeeeecCCCCCCCCCccEEEecccc
Q 024173 102 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVH-KGI-----VRVADIKFPLPYRAKSFPLVIVSDAL 175 (271)
Q Consensus 102 ~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvr-KGi-----VRvADIkfpLPYR~kSFslVivSDaL 175 (271)
.+||-||-.|-.....|.+....+..|||+.++ -..++..++ .|+ +..+|+.- +|+...+|++||.....
T Consensus 68 ~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~~---l~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~~~fD~Iis~~~~ 143 (349)
T 3q7e_A 68 KVVLDVGSGTGILCMFAAKAGARKVIGIECSSI---SDYAVKIVKANKLDHVVTIIKGKVEE-VELPVEKVDIIISEWMG 143 (349)
T ss_dssp CEEEEESCTTSHHHHHHHHTTCSEEEEEECSTH---HHHHHHHHHHTTCTTTEEEEESCTTT-CCCSSSCEEEEEECCCB
T ss_pred CEEEEEeccchHHHHHHHHCCCCEEEEECcHHH---HHHHHHHHHHcCCCCcEEEEECcHHH-ccCCCCceEEEEEcccc
Confidence 579999999998877777776679999999842 223333332 332 34556532 23446889998865433
Q ss_pred ccc-Chhhhcccccchhh-cccCceEEE
Q 024173 176 DYL-SPKYLNKTLPDLAR-VASDGVLIF 201 (271)
Q Consensus 176 DyL-spryLNkTLPeLaR-vsadglViF 201 (271)
.++ ....+.+.|-++.| +..+|++|+
T Consensus 144 ~~l~~~~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 144 YCLFYESMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp BTBTBTCCHHHHHHHHHHHEEEEEEEES
T ss_pred ccccCchhHHHHHHHHHHhCCCCCEEcc
Confidence 333 34455666666666 455677764
No 168
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=77.85 E-value=1.9 Score=32.23 Aligned_cols=72 Identities=14% Similarity=0.037 Sum_probs=40.0
Q ss_pred cccceeeecCCchhHhHhhhccc-ccccccccccc--ccchhHHHHHHHhhceeeeeeecCCCCC---CCCCccEEEe
Q 024173 100 SMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPY---RAKSFPLVIV 171 (271)
Q Consensus 100 sM~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEPyd--ied~d~~CKsLvrKGiVRvADIkfpLPY---R~kSFslViv 171 (271)
.-.+||-+|-.|......|.+.. ..+..|||..+ ++-+..+++..-.+--+..+|+.-+++- ...+|++|+.
T Consensus 30 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~ 107 (215)
T 4dzr_A 30 SGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIEWLIERAERGRPWHAIVS 107 (215)
T ss_dssp TTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-------------------CCHHHHHHHHHHHHHTTCCBSEEEE
T ss_pred CCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHhhhhhhhhccCcccEEEE
Confidence 44689999999999888888764 45788888643 3444444443211122445666554432 2389999987
No 169
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=77.28 E-value=2 Score=37.90 Aligned_cols=127 Identities=13% Similarity=0.158 Sum_probs=73.6
Q ss_pred cceeeecCCchhHhHhhhccccccccccccc-cccchhHHHHHHHhhceee--eeee---cC-CCCCCCCCccEEEeccc
Q 024173 102 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPY-DIEDADARCKSLVHKGIVR--VADI---KF-PLPYRAKSFPLVIVSDA 174 (271)
Q Consensus 102 ~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPy-died~d~~CKsLvrKGiVR--vADI---kf-pLPYR~kSFslVivSDa 174 (271)
..||-||-.|-..-..|++....+.+||+.. +|=+.. .+. ....+. -.|| .. .||. .+|++|++ |.
T Consensus 87 ~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a--~r~--~~rv~~~~~~ni~~l~~~~l~~--~~fD~v~~-d~ 159 (291)
T 3hp7_A 87 MITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWK--LRQ--DDRVRSMEQYNFRYAEPVDFTE--GLPSFASI-DV 159 (291)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHH--HHT--CTTEEEECSCCGGGCCGGGCTT--CCCSEEEE-CC
T ss_pred cEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHH--HHh--CcccceecccCceecchhhCCC--CCCCEEEE-Ee
Confidence 5799999999998888888877789999884 333321 010 011111 1122 11 1332 36998875 54
Q ss_pred ccccChhhhcccccchhhccc-CceEEEecCCCchhhhHHhhhhcCC---cc-ccccchhHHHHHHHhccc
Q 024173 175 LDYLSPKYLNKTLPDLARVAS-DGVLIFAGYPGQQRAKVAELSKFGR---PA-KMRSSSWWIRYFVQTSLE 240 (271)
Q Consensus 175 LDyLspryLNkTLPeLaRvsa-dglViF~G~Pgqqrakvaelskfgr---pa-K~rsssWW~r~F~qt~Le 240 (271)
. +. .|.+.||++.|+-. +|.+|+.=.|--. +.-.++.|.|- |. ..+....|..++.+.|++
T Consensus 160 s-f~---sl~~vL~e~~rvLkpGG~lv~lvkPqfe-~~~~~~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf~ 225 (291)
T 3hp7_A 160 S-FI---SLNLILPALAKILVDGGQVVALVKPQFE-AGREQIGKNGIVRESSIHEKVLETVTAFAVDYGFS 225 (291)
T ss_dssp S-SS---CGGGTHHHHHHHSCTTCEEEEEECGGGT-SCGGGCC-CCCCCCHHHHHHHHHHHHHHHHHTTEE
T ss_pred e-Hh---hHHHHHHHHHHHcCcCCEEEEEECcccc-cChhhcCCCCccCCHHHHHHHHHHHHHHHHHCCCE
Confidence 3 22 46999999999865 4566665344322 32235556564 21 123556677777777764
No 170
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=77.21 E-value=4.8 Score=34.70 Aligned_cols=95 Identities=17% Similarity=0.183 Sum_probs=58.1
Q ss_pred cceeeecCCchhHhHhhhccccccccccccccccchhHHHHHHHh-hce-----eeeeeecCCCCCCCCCccEEEecccc
Q 024173 102 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVH-KGI-----VRVADIKFPLPYRAKSFPLVIVSDAL 175 (271)
Q Consensus 102 ~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvr-KGi-----VRvADIkfpLPYR~kSFslVivSDaL 175 (271)
.+||-||-.|-.+...+.+....+..|||+.++ -..++..++ .|+ +..+|+. .+|+...+|++||.....
T Consensus 66 ~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~~---~~~a~~~~~~~~~~~~i~~~~~d~~-~~~~~~~~~D~Ivs~~~~ 141 (340)
T 2fyt_A 66 KVVLDVGCGTGILSMFAAKAGAKKVLGVDQSEI---LYQAMDIIRLNKLEDTITLIKGKIE-EVHLPVEKVDVIISEWMG 141 (340)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCSEEEEEESSTH---HHHHHHHHHHTTCTTTEEEEESCTT-TSCCSCSCEEEEEECCCB
T ss_pred CEEEEeeccCcHHHHHHHHcCCCEEEEEChHHH---HHHHHHHHHHcCCCCcEEEEEeeHH-HhcCCCCcEEEEEEcCch
Confidence 479999999988877777765568999998753 233444332 232 3455664 234446789998865421
Q ss_pred ccc-Chhhhcccccchhhc-ccCceEE
Q 024173 176 DYL-SPKYLNKTLPDLARV-ASDGVLI 200 (271)
Q Consensus 176 DyL-spryLNkTLPeLaRv-sadglVi 200 (271)
..| ....+...|-++.|+ ..+|++|
T Consensus 142 ~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 142 YFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp TTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred hhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 112 123344555555554 5567776
No 171
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=76.03 E-value=1.6 Score=34.79 Aligned_cols=98 Identities=12% Similarity=0.186 Sum_probs=59.1
Q ss_pred ccceeeecCCchhHhHhhhcc-cccccccccccc--ccchhHHHHHHHh--hceeeeeeecCCCC-CCCCCccEEEeccc
Q 024173 101 MHKVLHVGPDTCSVVSTLLKE-EETEAWGVEPYD--IEDADARCKSLVH--KGIVRVADIKFPLP-YRAKSFPLVIVSDA 174 (271)
Q Consensus 101 M~kVLHVGPdtC~VVs~LLkE-e~tEAWGVEPyd--ied~d~~CKsLvr--KGiVRvADIkfpLP-YR~kSFslVivSDa 174 (271)
-.+||-+|-.+-.....|.+. ...+..|||..+ ++-+..+++..-- +=-+..+|+.-.+| .-..+|++|++.-.
T Consensus 72 ~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~~ 151 (232)
T 3ntv_A 72 VKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFIDAA 151 (232)
T ss_dssp CCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEETT
T ss_pred CCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEEcCc
Confidence 368999999998887777763 267788888643 3444444433211 11356678765566 55789999985422
Q ss_pred ccccChhhhcccccchhhcccCceEEEe
Q 024173 175 LDYLSPKYLNKTLPDLARVASDGVLIFA 202 (271)
Q Consensus 175 LDyLspryLNkTLPeLaRvsadglViF~ 202 (271)
.+ --+.+|++..+ .+..+|++|+.
T Consensus 152 ~~-~~~~~l~~~~~---~LkpgG~lv~d 175 (232)
T 3ntv_A 152 KA-QSKKFFEIYTP---LLKHQGLVITD 175 (232)
T ss_dssp SS-SHHHHHHHHGG---GEEEEEEEEEE
T ss_pred HH-HHHHHHHHHHH---hcCCCeEEEEe
Confidence 21 12334444332 24567888773
No 172
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=75.50 E-value=1.6 Score=34.27 Aligned_cols=97 Identities=14% Similarity=0.159 Sum_probs=56.4
Q ss_pred cceeeecCCchhHhHhhhccc-ccccccccccc--ccchhHHHHHHHh--hceeeeeeecCCCCCC--CCCccEEEeccc
Q 024173 102 HKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYD--IEDADARCKSLVH--KGIVRVADIKFPLPYR--AKSFPLVIVSDA 174 (271)
Q Consensus 102 ~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEPyd--ied~d~~CKsLvr--KGiVRvADIkfpLPYR--~kSFslVivSDa 174 (271)
.+||-+|-.+......|.+.- ..+..|||+.+ ++-+..+++..-- +=-+..+|+.-.+|.- ..+|++|++...
T Consensus 56 ~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~~~ 135 (233)
T 2gpy_A 56 ARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLFIDAA 135 (233)
T ss_dssp SEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEEEGG
T ss_pred CEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEEECCC
Confidence 489999999877766666543 56788888643 2333333332211 1123456665545544 578999987554
Q ss_pred ccccChhhhcccccchhhcccCceEEEe
Q 024173 175 LDYLSPKYLNKTLPDLARVASDGVLIFA 202 (271)
Q Consensus 175 LDyLspryLNkTLPeLaRvsadglViF~ 202 (271)
.+ -.+++|+.... .+..+|++++.
T Consensus 136 ~~-~~~~~l~~~~~---~L~pgG~lv~~ 159 (233)
T 2gpy_A 136 KG-QYRRFFDMYSP---MVRPGGLILSD 159 (233)
T ss_dssp GS-CHHHHHHHHGG---GEEEEEEEEEE
T ss_pred HH-HHHHHHHHHHH---HcCCCeEEEEE
Confidence 33 22344444332 24567888886
No 173
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=75.48 E-value=3.7 Score=33.16 Aligned_cols=119 Identities=13% Similarity=0.072 Sum_probs=66.3
Q ss_pred ccceeeecCCchhHhHhhhcccccccccccccc--ccchhHHHHHHHh--hceeeeeeecCCCC-CCCCCccEEEecccc
Q 024173 101 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVH--KGIVRVADIKFPLP-YRAKSFPLVIVSDAL 175 (271)
Q Consensus 101 M~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvr--KGiVRvADIkfpLP-YR~kSFslVivSDaL 175 (271)
-.+||-+|-.|-.+--.|.+....+.+|||.-+ ++-+..|++..-- +--+..+|+.-..+ +...+|++||..--.
T Consensus 50 ~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~npPy 129 (259)
T 3lpm_A 50 KGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVTCNPPY 129 (259)
T ss_dssp CCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEEECCCC
T ss_pred CCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEEECCCC
Confidence 458999999998877777766555888888643 3334444442211 12345577764443 457899999873111
Q ss_pred ------cccCh------------hhhcccccchhh-cccCceEEEecCCCchhhhHHhhhhcC
Q 024173 176 ------DYLSP------------KYLNKTLPDLAR-VASDGVLIFAGYPGQQRAKVAELSKFG 219 (271)
Q Consensus 176 ------DyLsp------------ryLNkTLPeLaR-vsadglViF~G~Pgqqrakvaelskfg 219 (271)
...+| .-+...+..+.| +..+|.+++.-.|.+...-...+.+.|
T Consensus 130 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~~ 192 (259)
T 3lpm_A 130 FATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRPERLLDIIDIMRKYR 192 (259)
T ss_dssp -----------------------HHHHHHHHHHHHHEEEEEEEEEEECTTTHHHHHHHHHHTT
T ss_pred CCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcHHHHHHHHHHHHHCC
Confidence 11111 112233444444 456788888766655533334444433
No 174
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=73.85 E-value=3 Score=32.66 Aligned_cols=101 Identities=11% Similarity=0.000 Sum_probs=59.2
Q ss_pred ccceeeecCCchhHhHhhhcc--cccccccccccc--ccchhHHHHHHHhh--ceeeeeeecCCCCCCC-----CCccEE
Q 024173 101 MHKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKSLVHK--GIVRVADIKFPLPYRA-----KSFPLV 169 (271)
Q Consensus 101 M~kVLHVGPdtC~VVs~LLkE--e~tEAWGVEPyd--ied~d~~CKsLvrK--GiVRvADIkfpLPYR~-----kSFslV 169 (271)
-++||-+|-.+-...-.|.+. .+.+.+|||..+ ++-+..+++..--. =-+..+|..-.+|.-. .+|++|
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD~V 138 (221)
T 3u81_A 59 PSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLDMV 138 (221)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCSEE
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceEEE
Confidence 368999999988776666653 467889998754 44444444432111 1245567633344433 689999
Q ss_pred EecccccccChhhhcccccchhhcccCceEEEec
Q 024173 170 IVSDALDYLSPKYLNKTLPDLARVASDGVLIFAG 203 (271)
Q Consensus 170 ivSDaLDyLspryLNkTLPeLaRvsadglViF~G 203 (271)
++.-......+ ++ +.+-.+..+..+|++++..
T Consensus 139 ~~d~~~~~~~~-~~-~~~~~~~~LkpgG~lv~~~ 170 (221)
T 3u81_A 139 FLDHWKDRYLP-DT-LLLEKCGLLRKGTVLLADN 170 (221)
T ss_dssp EECSCGGGHHH-HH-HHHHHTTCCCTTCEEEESC
T ss_pred EEcCCcccchH-HH-HHHHhccccCCCeEEEEeC
Confidence 86543433221 11 2233334567888888865
No 175
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=72.23 E-value=1.8 Score=33.40 Aligned_cols=120 Identities=14% Similarity=0.097 Sum_probs=66.2
Q ss_pred cchHHHHhHhHHHHHHhcccccceeeecCCchhHhHhhhcc--cccccccccccc--ccchhHHHHHHHhh--ceeeeee
Q 024173 81 SCTSEIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKSLVHK--GIVRVAD 154 (271)
Q Consensus 81 sct~eV~~AiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkE--e~tEAWGVEPyd--ied~d~~CKsLvrK--GiVRvAD 154 (271)
..+.+..+.+-.|.+... -.+||-+|-.+-.....|++. ...+.+|||..+ ++-+..+++..--. =-+..+|
T Consensus 47 ~~~~~~~~~l~~l~~~~~--~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d 124 (225)
T 3tr6_A 47 QTAPEQAQLLALLVKLMQ--AKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSP 124 (225)
T ss_dssp SCCHHHHHHHHHHHHHHT--CSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESC
T ss_pred ccCHHHHHHHHHHHHhhC--CCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCC
Confidence 344555555554544433 348999999998877777764 367888888653 33344444332111 1244567
Q ss_pred ecCCCCCCC-----CCccEEEecccccccChhhhcccccchhh-cccCceEEEec--CCCc
Q 024173 155 IKFPLPYRA-----KSFPLVIVSDALDYLSPKYLNKTLPDLAR-VASDGVLIFAG--YPGQ 207 (271)
Q Consensus 155 IkfpLPYR~-----kSFslVivSDaLDyLspryLNkTLPeLaR-vsadglViF~G--~Pgq 207 (271)
+.-.+|.-. .+|++|++ |+- .....+.+.++.| +..+|++++.. ++|.
T Consensus 125 ~~~~~~~~~~~~~~~~fD~v~~-~~~----~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~ 180 (225)
T 3tr6_A 125 AKDTLAELIHAGQAWQYDLIYI-DAD----KANTDLYYEESLKLLREGGLIAVDNVLRRGQ 180 (225)
T ss_dssp HHHHHHHHHTTTCTTCEEEEEE-CSC----GGGHHHHHHHHHHHEEEEEEEEEECSSGGGG
T ss_pred HHHHHHHhhhccCCCCccEEEE-CCC----HHHHHHHHHHHHHhcCCCcEEEEeCCCcCCc
Confidence 643343322 78999984 332 2222233444444 45678887743 4443
No 176
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=71.23 E-value=4.9 Score=31.91 Aligned_cols=95 Identities=11% Similarity=0.072 Sum_probs=54.5
Q ss_pred ccceeeecCCchhHhHhhhc-ccccccccccccc--ccchhHHHHHHHhhc-eeeeeeecCCCCCC---CCCccEEEecc
Q 024173 101 MHKVLHVGPDTCSVVSTLLK-EEETEAWGVEPYD--IEDADARCKSLVHKG-IVRVADIKFPLPYR---AKSFPLVIVSD 173 (271)
Q Consensus 101 M~kVLHVGPdtC~VVs~LLk-Ee~tEAWGVEPyd--ied~d~~CKsLvrKG-iVRvADIkfpLPYR---~kSFslVivSD 173 (271)
-.+||-||-.|-..--.|.+ ....+..|||+.+ ++-+..+++.+--.. -+..+|+. .+|.. ..+|++|+...
T Consensus 71 ~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~-~~~~~~~~~~~fD~V~~~~ 149 (240)
T 1xdz_A 71 VNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAE-TFGQRKDVRESYDIVTARA 149 (240)
T ss_dssp CCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHH-HHTTCTTTTTCEEEEEEEC
T ss_pred CCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHH-HhcccccccCCccEEEEec
Confidence 35899999998765444443 3456788988754 344555554431112 13345552 23332 57899988654
Q ss_pred cccccChhhhcccccchhhc-ccCceEEEe
Q 024173 174 ALDYLSPKYLNKTLPDLARV-ASDGVLIFA 202 (271)
Q Consensus 174 aLDyLspryLNkTLPeLaRv-sadglViF~ 202 (271)
+. -+...+.++.|+ ..+|.+++.
T Consensus 150 -~~-----~~~~~l~~~~~~LkpgG~l~~~ 173 (240)
T 1xdz_A 150 -VA-----RLSVLSELCLPLVKKNGLFVAL 173 (240)
T ss_dssp -CS-----CHHHHHHHHGGGEEEEEEEEEE
T ss_pred -cC-----CHHHHHHHHHHhcCCCCEEEEE
Confidence 21 134555666554 567777775
No 177
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=70.95 E-value=3.7 Score=38.08 Aligned_cols=99 Identities=17% Similarity=0.160 Sum_probs=62.3
Q ss_pred ccceeeecCCchhHhHhhhcc-ccccccccccccc--cch-------hHHHHHHHh-hceeee--e-eecCCCCC--CCC
Q 024173 101 MHKVLHVGPDTCSVVSTLLKE-EETEAWGVEPYDI--EDA-------DARCKSLVH-KGIVRV--A-DIKFPLPY--RAK 164 (271)
Q Consensus 101 M~kVLHVGPdtC~VVs~LLkE-e~tEAWGVEPydi--ed~-------d~~CKsLvr-KGiVRv--A-DIkfpLPY--R~k 164 (271)
=.+||-+|-.|-.+...|.+. ...+.+|||..+- +-| ..+|+.+-- -+-|++ + |..-+.|+ -..
T Consensus 243 g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~~~~~~~~~~ 322 (433)
T 1u2z_A 243 GDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDNNRVAELIP 322 (433)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTCHHHHHHGG
T ss_pred CCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCccccccccccccC
Confidence 358999999999988888775 3357999997652 223 445543210 012333 3 33222233 246
Q ss_pred CccEEEecccccccChhhhcccccchhhcccC-ceEEEe
Q 024173 165 SFPLVIVSDALDYLSPKYLNKTLPDLARVASD-GVLIFA 202 (271)
Q Consensus 165 SFslVivSDaLDyLspryLNkTLPeLaRvsad-glViF~ 202 (271)
+|++|++++++ + . .-++..|-++.|+-.. |.+++.
T Consensus 323 ~FDvIvvn~~l-~-~-~d~~~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 323 QCDVILVNNFL-F-D-EDLNKKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp GCSEEEECCTT-C-C-HHHHHHHHHHHTTCCTTCEEEES
T ss_pred CCCEEEEeCcc-c-c-ccHHHHHHHHHHhCCCCeEEEEe
Confidence 89999988777 2 3 4577888899988775 555554
No 178
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=69.48 E-value=9.1 Score=28.80 Aligned_cols=99 Identities=13% Similarity=0.137 Sum_probs=57.7
Q ss_pred ccceeeecCCchhHhHhhhccc---cccccccccccccchhHHHHHHHhhceeeeeeecCCC-------C----------
Q 024173 101 MHKVLHVGPDTCSVVSTLLKEE---ETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPL-------P---------- 160 (271)
Q Consensus 101 M~kVLHVGPdtC~VVs~LLkEe---~tEAWGVEPydied~d~~CKsLvrKGiVRvADIkfpL-------P---------- 160 (271)
-.+||.+|-.|-.+...|.+.- ..+..|||..++... ..=.+..+|+.-.. |
T Consensus 23 ~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~~~--------~~v~~~~~d~~~~~~~~~~~~~~i~~~~~~~~ 94 (201)
T 2plw_A 23 NKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMDPI--------PNVYFIQGEIGKDNMNNIKNINYIDNMNNNSV 94 (201)
T ss_dssp TEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCCCC--------TTCEEEECCTTTTSSCCC-----------CHH
T ss_pred CCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccCCC--------CCceEEEccccchhhhhhccccccccccchhh
Confidence 3579999999887776676653 478999998886421 11123345664321 1
Q ss_pred -------CCCCCccEEEecccccccChhhh---------cccccchhhc-ccCceEEEecCCCc
Q 024173 161 -------YRAKSFPLVIVSDALDYLSPKYL---------NKTLPDLARV-ASDGVLIFAGYPGQ 207 (271)
Q Consensus 161 -------YR~kSFslVivSDaLDyLspryL---------NkTLPeLaRv-sadglViF~G~Pgq 207 (271)
+...+|++|+..-++.+...... .+.|.+..|+ ..+|.+++.-+.++
T Consensus 95 ~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~ 158 (201)
T 2plw_A 95 DYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLGS 158 (201)
T ss_dssp HHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECST
T ss_pred HHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCCC
Confidence 34568999886444444311111 1245556664 66788877554443
No 179
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=69.08 E-value=13 Score=31.59 Aligned_cols=95 Identities=18% Similarity=0.184 Sum_probs=55.1
Q ss_pred cceeeecCCchhHhHhhhccccccccccccccccchhHHHHHHHh-hce-----eeeeeecCCCCCCCCCccEEEecccc
Q 024173 102 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVH-KGI-----VRVADIKFPLPYRAKSFPLVIVSDAL 175 (271)
Q Consensus 102 ~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvr-KGi-----VRvADIkfpLPYR~kSFslVivSDaL 175 (271)
.+||-||-.|..+...+.+....+..|||+.++ -..++..++ .|+ +..+|+. .+|....+|++||..-..
T Consensus 40 ~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s~~---~~~a~~~~~~~~~~~~i~~~~~d~~-~~~~~~~~~D~Ivs~~~~ 115 (328)
T 1g6q_1 40 KIVLDVGCGTGILSMFAAKHGAKHVIGVDMSSI---IEMAKELVELNGFSDKITLLRGKLE-DVHLPFPKVDIIISEWMG 115 (328)
T ss_dssp CEEEEETCTTSHHHHHHHHTCCSEEEEEESSTH---HHHHHHHHHHTTCTTTEEEEESCTT-TSCCSSSCEEEEEECCCB
T ss_pred CEEEEecCccHHHHHHHHHCCCCEEEEEChHHH---HHHHHHHHHHcCCCCCEEEEECchh-hccCCCCcccEEEEeCch
Confidence 589999999988777777665568999998643 223444333 343 3445553 123335789988864332
Q ss_pred cccC-hhhhcccccchhhc-ccCceEE
Q 024173 176 DYLS-PKYLNKTLPDLARV-ASDGVLI 200 (271)
Q Consensus 176 DyLs-pryLNkTLPeLaRv-sadglVi 200 (271)
..|. ..-+.+.|-++.|+ ..+|++|
T Consensus 116 ~~l~~~~~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 116 YFLLYESMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp TTBSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred hhcccHHHHHHHHHHHHhhcCCCeEEE
Confidence 3331 22233344444444 5567776
No 180
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=67.85 E-value=7.9 Score=31.13 Aligned_cols=101 Identities=18% Similarity=0.170 Sum_probs=61.6
Q ss_pred cccceeeecCCchhHhHhhhccccccccccccccccchhHHHHHHHhhce--eee--eee-cCCCCCCCCCccEEEeccc
Q 024173 100 SMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGI--VRV--ADI-KFPLPYRAKSFPLVIVSDA 174 (271)
Q Consensus 100 sM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvrKGi--VRv--ADI-kfpLPYR~kSFslVivSDa 174 (271)
.=.+||-||-.+-.....|.+....+.+|||+.+ +.-...+...++.- +++ .|. ....+.-..+|+.|+. |+
T Consensus 60 ~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~--~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~~-D~ 136 (236)
T 3orh_A 60 KGGRVLEVGFGMAIAASKVQEAPIDEHWIIECND--GVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILY-DT 136 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCH--HHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEE-CC
T ss_pred CCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCH--HHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEEE-ee
Confidence 4468999999998877777776667889999863 44444554443322 232 232 1234555788998863 43
Q ss_pred cc-c---cChhhhcccccchhhc-ccCceEEEec
Q 024173 175 LD-Y---LSPKYLNKTLPDLARV-ASDGVLIFAG 203 (271)
Q Consensus 175 LD-y---LspryLNkTLPeLaRv-sadglViF~G 203 (271)
.- . ..-.+..+.+-|++|| -..|+.+|..
T Consensus 137 ~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 137 YPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp CCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred eecccchhhhcchhhhhhhhhheeCCCCEEEEEe
Confidence 21 1 1112345667788885 4567777754
No 181
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=66.35 E-value=7.4 Score=32.75 Aligned_cols=110 Identities=16% Similarity=0.103 Sum_probs=61.9
Q ss_pred HHHHhHhHHHHHHhcccccceeeecCCchhHhHhhhcccccccccccccc--ccchhHHHH----HHHh-hceeeeeeec
Q 024173 84 SEIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCK----SLVH-KGIVRVADIK 156 (271)
Q Consensus 84 ~eV~~AiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CK----sLvr-KGiVRvADIk 156 (271)
.|.+..+|.+. -..-++||.||-.+..+...+++.. .+..+||.-+ ++-+..+.. .+-. +=-+.++|.-
T Consensus 59 ~e~l~~~~~~~---~~~~~~VL~iG~G~G~~~~~ll~~~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~ 134 (262)
T 2cmg_A 59 SELLAHMGGCT---KKELKEVLIVDGFDLELAHQLFKYD-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLD 134 (262)
T ss_dssp HHHHHHHHHTT---SSCCCEEEEESSCCHHHHHHHTTSS-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGG
T ss_pred HHHHHHHhhhc---CCCCCEEEEEeCCcCHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHH
Confidence 34455555442 1234789999999999999999884 7778887542 111211111 1111 1124455653
Q ss_pred CCCCCCCCCccEEEecccccccChhhhcccccchhh-cccCceEEEe-cCCCch
Q 024173 157 FPLPYRAKSFPLVIVSDALDYLSPKYLNKTLPDLAR-VASDGVLIFA-GYPGQQ 208 (271)
Q Consensus 157 fpLPYR~kSFslVivSDaLDyLspryLNkTLPeLaR-vsadglViF~-G~Pgqq 208 (271)
--+ .+|++||+ |+-| |.. .+.++.| +..+|++++. |.|..+
T Consensus 135 ~~~----~~fD~Ii~-d~~d---p~~---~~~~~~~~L~pgG~lv~~~~~~~~~ 177 (262)
T 2cmg_A 135 LDI----KKYDLIFC-LQEP---DIH---RIDGLKRMLKEDGVFISVAKHPLLE 177 (262)
T ss_dssp SCC----CCEEEEEE-SSCC---CHH---HHHHHHTTEEEEEEEEEEEECTTTC
T ss_pred HHH----hhCCEEEE-CCCC---hHH---HHHHHHHhcCCCcEEEEEcCCcccC
Confidence 222 78999886 5433 332 3445444 5667887764 566543
No 182
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=65.16 E-value=8.1 Score=33.91 Aligned_cols=116 Identities=20% Similarity=0.182 Sum_probs=66.3
Q ss_pred HHHHhHhHHHHHHhcccccceeeecCCchhHhHhhhccc-cccccccccccccchhHHHHHHHhh---ce------eeee
Q 024173 84 SEIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLVHK---GI------VRVA 153 (271)
Q Consensus 84 ~eV~~AiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEPydied~d~~CKsLvrK---Gi------VRvA 153 (271)
.|.+..+|++.- ..-.+||.||-.+..+...|++.. ..+..+||..+ ++-..|+.-..+ |+ +..+
T Consensus 107 ~e~L~~l~l~~~---~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~--~~l~~Ar~~~~~~~~gl~~~rv~~~~~ 181 (334)
T 1xj5_A 107 QEMITHLPLCSI---PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDK--MVVDVSKQFFPDVAIGYEDPRVNLVIG 181 (334)
T ss_dssp HHHHHHHHHTTS---SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCH--HHHHHHHHHCHHHHGGGGSTTEEEEES
T ss_pred HHHHHHHHHhhC---CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCH--HHHHHHHHHHHhhccccCCCcEEEEEC
Confidence 455555665431 233689999999999999999863 45777777543 222333332221 32 4566
Q ss_pred eecCCCC-CCCCCccEEEecccccccChhh---hcccccchhh-cccCceEEEe-cCC
Q 024173 154 DIKFPLP-YRAKSFPLVIVSDALDYLSPKY---LNKTLPDLAR-VASDGVLIFA-GYP 205 (271)
Q Consensus 154 DIkfpLP-YR~kSFslVivSDaLDyLspry---LNkTLPeLaR-vsadglViF~-G~P 205 (271)
|+.-.++ ....+|++||+ |..+...+.. ....+.++.| +..+|++++. +.|
T Consensus 182 D~~~~l~~~~~~~fDlIi~-d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~ 238 (334)
T 1xj5_A 182 DGVAFLKNAAEGSYDAVIV-DSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQAESL 238 (334)
T ss_dssp CHHHHHHTSCTTCEEEEEE-CCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECCCT
T ss_pred CHHHHHHhccCCCccEEEE-CCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEecCCc
Confidence 7542232 23578998875 6554332211 1233444444 4678888885 444
No 183
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=62.16 E-value=8.5 Score=34.05 Aligned_cols=103 Identities=11% Similarity=0.120 Sum_probs=63.8
Q ss_pred cceeeecCCchhHhHhhhccc-ccccccccccc--ccchhHHHHHHHh--hcee--eeeeecCCCCCCCCCccEEEeccc
Q 024173 102 HKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYD--IEDADARCKSLVH--KGIV--RVADIKFPLPYRAKSFPLVIVSDA 174 (271)
Q Consensus 102 ~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEPyd--ied~d~~CKsLvr--KGiV--RvADIkfpLPYR~kSFslVivSDa 174 (271)
.+||-+|-.+..+-..|.+.. ..+..|||..+ ++-+..|++..-- +.-| ..+|+--++ ...+|++||....
T Consensus 224 ~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~--~~~~fD~Ii~npp 301 (375)
T 4dcm_A 224 GEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGV--EPFRFNAVLCNPP 301 (375)
T ss_dssp SEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTC--CTTCEEEEEECCC
T ss_pred CeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccC--CCCCeeEEEECCC
Confidence 689999999999888888765 67889998753 2333334332210 0124 567776544 4678999987655
Q ss_pred ccc---cChhhhcccccchhh-cccCceEEEecCCC
Q 024173 175 LDY---LSPKYLNKTLPDLAR-VASDGVLIFAGYPG 206 (271)
Q Consensus 175 LDy---LspryLNkTLPeLaR-vsadglViF~G~Pg 206 (271)
+.. +......+-+-++.| +..+|.+++.++..
T Consensus 302 fh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~~ 337 (375)
T 4dcm_A 302 FHQQHALTDNVAWEMFHHARRCLKINGELYIVANRH 337 (375)
T ss_dssp C-------CCHHHHHHHHHHHHEEEEEEEEEEEETT
T ss_pred cccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEECC
Confidence 422 112222234666666 57899999987543
No 184
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=61.99 E-value=8.9 Score=31.35 Aligned_cols=112 Identities=16% Similarity=0.150 Sum_probs=63.1
Q ss_pred hHHHHhHhHHHHHHhcccccceeeecCCchhHhHhhhcc--cccccccccccc--ccchhHHHHHHHhhce-----eeee
Q 024173 83 TSEIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKSLVHKGI-----VRVA 153 (271)
Q Consensus 83 t~eV~~AiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkE--e~tEAWGVEPyd--ied~d~~CKsLvrKGi-----VRvA 153 (271)
..+..+.+-.|-+..+ -++||-||-.+-...-.|.+. ++.+..|||..+ ++-+..+++ +.|+ ++.+
T Consensus 64 ~~~~~~ll~~l~~~~~--~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~---~~g~~~~i~~~~g 138 (247)
T 1sui_A 64 SADEGQFLSMLLKLIN--AKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIK---KAGVDHKIDFREG 138 (247)
T ss_dssp CHHHHHHHHHHHHHTT--CCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHH---HTTCGGGEEEEES
T ss_pred CHHHHHHHHHHHHhhC--cCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH---HcCCCCCeEEEEC
Confidence 3444444444444333 358999999998776666653 257888988754 222333333 2343 4556
Q ss_pred eecCCCCCC------CCCccEEEecccccccChhhhcccccchhhcccCceEEEec
Q 024173 154 DIKFPLPYR------AKSFPLVIVSDALDYLSPKYLNKTLPDLARVASDGVLIFAG 203 (271)
Q Consensus 154 DIkfpLPYR------~kSFslVivSDaLDyLspryLNkTLPeLaRvsadglViF~G 203 (271)
|..--||.- ..+|++|++ |+-.--.+.||...++ .+..+|++++..
T Consensus 139 da~~~l~~l~~~~~~~~~fD~V~~-d~~~~~~~~~l~~~~~---~LkpGG~lv~d~ 190 (247)
T 1sui_A 139 PALPVLDEMIKDEKNHGSYDFIFV-DADKDNYLNYHKRLID---LVKVGGVIGYDN 190 (247)
T ss_dssp CHHHHHHHHHHSGGGTTCBSEEEE-CSCSTTHHHHHHHHHH---HBCTTCCEEEEC
T ss_pred CHHHHHHHHHhccCCCCCEEEEEE-cCchHHHHHHHHHHHH---hCCCCeEEEEec
Confidence 654334421 468999876 4422122455555442 356788888753
No 185
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=59.84 E-value=9.3 Score=31.18 Aligned_cols=118 Identities=13% Similarity=0.137 Sum_probs=71.2
Q ss_pred cccccceeeecCCchhHhHhhhccc-ccccccccccc--ccchhHHHHHHHh---hce----eeeeeecCCCC--CCCCC
Q 024173 98 GDSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYD--IEDADARCKSLVH---KGI----VRVADIKFPLP--YRAKS 165 (271)
Q Consensus 98 GdsM~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEPyd--ied~d~~CKsLvr---KGi----VRvADIkfpLP--YR~kS 165 (271)
...-..||-||-.+-.....|.+.- +....|||+.+ ++-+..+++.|-+ .|+ +..+|+.-.|| +...+
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~ 123 (235)
T 3ckk_A 44 AQAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQ 123 (235)
T ss_dssp --CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTC
T ss_pred cCCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcC
Confidence 3445689999999988888877663 57889999874 3445556655421 232 34577765566 66789
Q ss_pred ccEEEecccccccChhhh----------cccccchhhc-ccCceEEEe-cCCCchhhhHHhhhhcC
Q 024173 166 FPLVIVSDALDYLSPKYL----------NKTLPDLARV-ASDGVLIFA-GYPGQQRAKVAELSKFG 219 (271)
Q Consensus 166 FslVivSDaLDyLspryL----------NkTLPeLaRv-sadglViF~-G~Pgqqrakvaelskfg 219 (271)
|+.|++. |-.|-.- ...|-+++|+ ..+|.++|+ ..+.....-..++.+.|
T Consensus 124 ~D~v~~~----~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~~~~~~~~~~~l~~~~ 185 (235)
T 3ckk_A 124 LTKMFFL----FPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDVLELHDWMCTHFEEHP 185 (235)
T ss_dssp EEEEEEE----SCC-----------CCCHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHTST
T ss_pred eeEEEEe----CCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHHHHHCC
Confidence 9998753 2233211 1245566665 456777775 45555544555566654
No 186
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=59.22 E-value=12 Score=31.03 Aligned_cols=94 Identities=5% Similarity=-0.034 Sum_probs=58.7
Q ss_pred cceeeecCCchhHhHhhhcccccccccccccc--ccchhHHHHHHHhhc-e-eeeeeecCCCCCCCCCccEEEecccccc
Q 024173 102 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKG-I-VRVADIKFPLPYRAKSFPLVIVSDALDY 177 (271)
Q Consensus 102 ~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvrKG-i-VRvADIkfpLPYR~kSFslVivSDaLDy 177 (271)
.+||-+|-.|...--.+.+....+.+|||..+ ++.+..|++..--.. + +..+|+.-.++ ..+|++||. |.
T Consensus 127 ~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~--~~~fD~Vi~-~~--- 200 (278)
T 2frn_A 127 ELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG--ENIADRILM-GY--- 200 (278)
T ss_dssp CEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC--CSCEEEEEE-CC---
T ss_pred CEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc--cCCccEEEE-CC---
Confidence 58999999998887777766555789988643 555666655321112 2 55678755554 778999876 32
Q ss_pred cChhhhcccccchhhcc-cCceEEEec
Q 024173 178 LSPKYLNKTLPDLARVA-SDGVLIFAG 203 (271)
Q Consensus 178 LspryLNkTLPeLaRvs-adglViF~G 203 (271)
|....+.++++.|+- .+|++++..
T Consensus 201 --p~~~~~~l~~~~~~LkpgG~l~~~~ 225 (278)
T 2frn_A 201 --VVRTHEFIPKALSIAKDGAIIHYHN 225 (278)
T ss_dssp --CSSGGGGHHHHHHHEEEEEEEEEEE
T ss_pred --chhHHHHHHHHHHHCCCCeEEEEEE
Confidence 222234555666654 456666644
No 187
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=58.14 E-value=15 Score=30.92 Aligned_cols=94 Identities=17% Similarity=0.171 Sum_probs=58.3
Q ss_pred ccceeeecCCchhHhHhhhccc--ccccccccccc--ccchhHHHHHHHhhce----eeeeeecCCCCCCCCCccEEEec
Q 024173 101 MHKVLHVGPDTCSVVSTLLKEE--ETEAWGVEPYD--IEDADARCKSLVHKGI----VRVADIKFPLPYRAKSFPLVIVS 172 (271)
Q Consensus 101 M~kVLHVGPdtC~VVs~LLkEe--~tEAWGVEPyd--ied~d~~CKsLvrKGi----VRvADIkfpLPYR~kSFslVivS 172 (271)
-.+||-||-.+-.....|.+.. ..+..|||+.+ ++.+..+++ +.|+ +..+|+.-.+| ...+|++|++.
T Consensus 76 ~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~---~~g~~~v~~~~~d~~~~~~-~~~~fD~Iv~~ 151 (317)
T 1dl5_A 76 GMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVE---RLGIENVIFVCGDGYYGVP-EFSPYDVIFVT 151 (317)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHH---HTTCCSEEEEESCGGGCCG-GGCCEEEEEEC
T ss_pred cCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHH---HcCCCCeEEEECChhhccc-cCCCeEEEEEc
Confidence 3589999999876665555442 23588888643 233333332 2232 44567654444 45789999999
Q ss_pred ccccccChhhhcccccchh-hcccCceEEEecCCC
Q 024173 173 DALDYLSPKYLNKTLPDLA-RVASDGVLIFAGYPG 206 (271)
Q Consensus 173 DaLDyLspryLNkTLPeLa-RvsadglViF~G~Pg 206 (271)
..+.++.. ++. .+..+|++++.-.|.
T Consensus 152 ~~~~~~~~--------~~~~~LkpgG~lvi~~~~~ 178 (317)
T 1dl5_A 152 VGVDEVPE--------TWFTQLKEGGRVIVPINLK 178 (317)
T ss_dssp SBBSCCCH--------HHHHHEEEEEEEEEEBCBG
T ss_pred CCHHHHHH--------HHHHhcCCCcEEEEEECCC
Confidence 99988762 222 345678877775554
No 188
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=58.12 E-value=7.9 Score=32.81 Aligned_cols=115 Identities=21% Similarity=0.259 Sum_probs=61.9
Q ss_pred HHHhHhHHHHHHhcccccceeeecCCchhHhHhhhccc-cccccccccccccchhHHHHHHH---h------hceeeeee
Q 024173 85 EIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYDIEDADARCKSLV---H------KGIVRVAD 154 (271)
Q Consensus 85 eV~~AiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEPydied~d~~CKsLv---r------KGiVRvAD 154 (271)
|.+..+|++.- ..-.+||.||-.+..+...|++.. ..+..|||.-+ ++-..|+.-. . +=-+.++|
T Consensus 83 e~l~~~~l~~~---~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~--~~i~~a~~~~~~~~~~~~~~~v~~~~~D 157 (304)
T 3bwc_A 83 EVLGHTSLCSH---PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDG--EVMEQSKQHFPQISRSLADPRATVRVGD 157 (304)
T ss_dssp HHHHHHHHTTS---SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCH--HHHHHHHHHCHHHHGGGGCTTEEEEESC
T ss_pred HHHhhhhhhcC---CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCH--HHHHHHHHHhHHhhcccCCCcEEEEECc
Confidence 44444554321 233689999999999999999763 45777777542 1222333222 1 11245667
Q ss_pred ec-CCCCCCCCCccEEEecccccccCh-hhh--cccccchhh-cccCceEEEec-CC
Q 024173 155 IK-FPLPYRAKSFPLVIVSDALDYLSP-KYL--NKTLPDLAR-VASDGVLIFAG-YP 205 (271)
Q Consensus 155 Ik-fpLPYR~kSFslVivSDaLDyLsp-ryL--NkTLPeLaR-vsadglViF~G-~P 205 (271)
+. ++......+|++||+ |..++..| ..| ...+-++.| +..+|++++.. .|
T Consensus 158 ~~~~~~~~~~~~fDvIi~-d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~ 213 (304)
T 3bwc_A 158 GLAFVRQTPDNTYDVVII-DTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESI 213 (304)
T ss_dssp HHHHHHSSCTTCEEEEEE-ECC---------CCHHHHHHHHHHEEEEEEEEEEECCT
T ss_pred HHHHHHhccCCceeEEEE-CCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCCc
Confidence 63 222223678999886 66665543 111 233445554 45678887754 44
No 189
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=58.08 E-value=13 Score=33.72 Aligned_cols=94 Identities=20% Similarity=0.209 Sum_probs=64.7
Q ss_pred cceeeecCCchhHhHhhhcccccccccccccc--ccchhHHHHHHHhhce---eeeeeecCCCCCCCCCccEEEeccccc
Q 024173 102 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGI---VRVADIKFPLPYRAKSFPLVIVSDALD 176 (271)
Q Consensus 102 ~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvrKGi---VRvADIkfpLPYR~kSFslVivSDaLD 176 (271)
.+||-+|-.+-..-..|.+. ..+..|||..+ ++++..|++. .|+ +..+|+.-.+|- +|++||+ |
T Consensus 292 ~~VLDlgcG~G~~sl~la~~-~~~V~gvD~s~~ai~~A~~n~~~---ngl~v~~~~~d~~~~~~~---~fD~Vv~-d--- 360 (425)
T 2jjq_A 292 EKILDMYSGVGTFGIYLAKR-GFNVKGFDSNEFAIEMARRNVEI---NNVDAEFEVASDREVSVK---GFDTVIV-D--- 360 (425)
T ss_dssp SEEEEETCTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHH---HTCCEEEEECCTTTCCCT---TCSEEEE-C---
T ss_pred CEEEEeeccchHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHH---cCCcEEEEECChHHcCcc---CCCEEEE-c---
Confidence 57999999998877776654 56889998653 5666666653 343 455676544432 8998886 3
Q ss_pred ccChh--hhcccccchhhcccCceEEEecCCCch
Q 024173 177 YLSPK--YLNKTLPDLARVASDGVLIFAGYPGQQ 208 (271)
Q Consensus 177 yLspr--yLNkTLPeLaRvsadglViF~G~Pgqq 208 (271)
.|| +-.+.+..+.++..+|+|+++-+|...
T Consensus 361 --PPr~g~~~~~~~~l~~l~p~givyvsc~p~tl 392 (425)
T 2jjq_A 361 --PPRAGLHPRLVKRLNREKPGVIVYVSCNPETF 392 (425)
T ss_dssp --CCTTCSCHHHHHHHHHHCCSEEEEEESCHHHH
T ss_pred --CCccchHHHHHHHHHhcCCCcEEEEECChHHH
Confidence 232 122356667788899999999999765
No 190
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=56.20 E-value=9.3 Score=32.85 Aligned_cols=91 Identities=18% Similarity=0.164 Sum_probs=60.7
Q ss_pred cceeeecCCchhHhHhhhcccccccccccc--ccccchhHHHHHHH--hhceeeeeeecCCCCCCCCCccEEEecccccc
Q 024173 102 HKVLHVGPDTCSVVSTLLKEEETEAWGVEP--YDIEDADARCKSLV--HKGIVRVADIKFPLPYRAKSFPLVIVSDALDY 177 (271)
Q Consensus 102 ~kVLHVGPdtC~VVs~LLkEe~tEAWGVEP--ydied~d~~CKsLv--rKGiVRvADIkfpLPYR~kSFslVivSDaLDy 177 (271)
.+||-+|-.|...--. .+ ...+.+|||. --++.+..|++..- .+--+..+|+.-.+ .+|++||+ |.
T Consensus 197 ~~VLDlg~G~G~~~l~-a~-~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~----~~fD~Vi~-dp--- 266 (336)
T 2yx1_A 197 DVVVDMFAGVGPFSIA-CK-NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD----VKGNRVIM-NL--- 266 (336)
T ss_dssp CEEEETTCTTSHHHHH-TT-TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC----CCEEEEEE-CC---
T ss_pred CEEEEccCccCHHHHh-cc-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc----CCCcEEEE-CC---
Confidence 5799999999988666 66 5778899885 34566666665431 11224456765433 78998886 42
Q ss_pred cChhhhcccccchhhc-ccCceEEEecC
Q 024173 178 LSPKYLNKTLPDLARV-ASDGVLIFAGY 204 (271)
Q Consensus 178 LspryLNkTLPeLaRv-sadglViF~G~ 204 (271)
|.+..+.+.++.|+ ..+|++++..+
T Consensus 267 --P~~~~~~l~~~~~~L~~gG~l~~~~~ 292 (336)
T 2yx1_A 267 --PKFAHKFIDKALDIVEEGGVIHYYTI 292 (336)
T ss_dssp --TTTGGGGHHHHHHHEEEEEEEEEEEE
T ss_pred --cHhHHHHHHHHHHHcCCCCEEEEEEe
Confidence 66666777777765 46788887764
No 191
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=55.56 E-value=16 Score=27.24 Aligned_cols=99 Identities=14% Similarity=0.160 Sum_probs=56.6
Q ss_pred cceeeecCCchhHhHhhhcc-cc---------ccccccccccccchhHHHHHHHhhceee-eeeecCCC-------CCCC
Q 024173 102 HKVLHVGPDTCSVVSTLLKE-EE---------TEAWGVEPYDIEDADARCKSLVHKGIVR-VADIKFPL-------PYRA 163 (271)
Q Consensus 102 ~kVLHVGPdtC~VVs~LLkE-e~---------tEAWGVEPydied~d~~CKsLvrKGiVR-vADIkfpL-------PYR~ 163 (271)
.+||.+|-.+-.+...|.+. .. .+.+|||+.++...+ ++ -+. .+|+.-+- +...
T Consensus 24 ~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~~~-~~-------~~~~~~d~~~~~~~~~~~~~~~~ 95 (196)
T 2nyu_A 24 LRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFPLE-GA-------TFLCPADVTDPRTSQRILEVLPG 95 (196)
T ss_dssp CEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCCCT-TC-------EEECSCCTTSHHHHHHHHHHSGG
T ss_pred CEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcccCC-CC-------eEEEeccCCCHHHHHHHHHhcCC
Confidence 58999999997766666665 22 689999998854211 11 122 34543221 1224
Q ss_pred CCccEEEeccccccc-----Chhh----hcccccchhhc-ccCceEEEecCCCch
Q 024173 164 KSFPLVIVSDALDYL-----SPKY----LNKTLPDLARV-ASDGVLIFAGYPGQQ 208 (271)
Q Consensus 164 kSFslVivSDaLDyL-----spry----LNkTLPeLaRv-sadglViF~G~Pgqq 208 (271)
.+|++||..-++++. .+.. +.+.|-++.|+ ..+|.+++.-+.++.
T Consensus 96 ~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~ 150 (196)
T 2nyu_A 96 RRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAGSQ 150 (196)
T ss_dssp GCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCSGG
T ss_pred CCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCcc
Confidence 589998874434331 1111 12455566654 567888887655443
No 192
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=55.04 E-value=9.3 Score=31.26 Aligned_cols=81 Identities=14% Similarity=0.165 Sum_probs=46.2
Q ss_pred cceeeecCCchhHhHhhhcccccccccccccc--ccchhHHHHHHHhhceeeeeee-cCCCCCCCCCccEEEeccccccc
Q 024173 102 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADI-KFPLPYRAKSFPLVIVSDALDYL 178 (271)
Q Consensus 102 ~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvrKGiVRvADI-kfpLPYR~kSFslVivSDaLDyL 178 (271)
.+||-|||.|-.....|++.. .+..|||.-+ ++-+..+++.. .+--+..+|+ ++++|- .++++|++|.-=+.
T Consensus 32 ~~VLDiG~G~G~lt~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~-~~v~~~~~D~~~~~~~~---~~~~~vv~nlPy~~ 106 (244)
T 1qam_A 32 DNIFEIGSGKGHFTLELVQRC-NFVTAIEIDHKLCKTTENKLVDH-DNFQVLNKDILQFKFPK---NQSYKIFGNIPYNI 106 (244)
T ss_dssp CEEEEECCTTSHHHHHHHHHS-SEEEEECSCHHHHHHHHHHTTTC-CSEEEECCCGGGCCCCS---SCCCEEEEECCGGG
T ss_pred CEEEEEeCCchHHHHHHHHcC-CeEEEEECCHHHHHHHHHhhccC-CCeEEEEChHHhCCccc---CCCeEEEEeCCccc
Confidence 579999999999888888664 7788888642 22222233211 1223455675 334432 22347888865544
Q ss_pred Chhhhcccc
Q 024173 179 SPKYLNKTL 187 (271)
Q Consensus 179 spryLNkTL 187 (271)
+..-+.+.+
T Consensus 107 ~~~~l~~~l 115 (244)
T 1qam_A 107 STDIIRKIV 115 (244)
T ss_dssp HHHHHHHHH
T ss_pred CHHHHHHHH
Confidence 444443333
No 193
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=54.83 E-value=27 Score=29.32 Aligned_cols=67 Identities=13% Similarity=0.241 Sum_probs=43.7
Q ss_pred cceeeecCCchhHhHhhhcccccccccccccc--ccchhHHHHHHHhhc--eeeeeeecCCCCCCCCCc---cEEEe
Q 024173 102 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKG--IVRVADIKFPLPYRAKSF---PLVIV 171 (271)
Q Consensus 102 ~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvrKG--iVRvADIkfpLPYR~kSF---slViv 171 (271)
.+||-+|-.|..+.-.|.++...+.+|||..+ ++-+..|++.+--.+ -+..+|+--++| .+| ++|+.
T Consensus 125 ~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~~~---~~f~~~D~Ivs 198 (284)
T 1nv8_A 125 KTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFK---EKFASIEMILS 198 (284)
T ss_dssp CEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGGG---GGTTTCCEEEE
T ss_pred CEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhhcc---cccCCCCEEEE
Confidence 47999999998888888777566788887642 344555555431111 234567765565 578 88765
No 194
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=54.25 E-value=12 Score=30.93 Aligned_cols=97 Identities=14% Similarity=0.008 Sum_probs=61.9
Q ss_pred cceeeecCCchhHhHhhhcc-ccccccccccc--cccchhHHHHHHH-hhceeeeeeecCCCCCCCCCccEEEecccccc
Q 024173 102 HKVLHVGPDTCSVVSTLLKE-EETEAWGVEPY--DIEDADARCKSLV-HKGIVRVADIKFPLPYRAKSFPLVIVSDALDY 177 (271)
Q Consensus 102 ~kVLHVGPdtC~VVs~LLkE-e~tEAWGVEPy--died~d~~CKsLv-rKGiVRvADIkfpLPYR~kSFslVivSDaLDy 177 (271)
.+||-+|-.+...--.|.+. ...+.+|||.. -++.+..|++..- ..=.+..+|+.-. |. ..+|++||+.-
T Consensus 121 ~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~-~~-~~~~D~Vi~d~---- 194 (272)
T 3a27_A 121 EVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDV-EL-KDVADRVIMGY---- 194 (272)
T ss_dssp CEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGC-CC-TTCEEEEEECC----
T ss_pred CEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHc-Cc-cCCceEEEECC----
Confidence 57999999998887777765 35688898864 3555555554321 1112556677544 55 66899987642
Q ss_pred cChhhhcccccchh-hcccCceEEEecCCC
Q 024173 178 LSPKYLNKTLPDLA-RVASDGVLIFAGYPG 206 (271)
Q Consensus 178 LspryLNkTLPeLa-RvsadglViF~G~Pg 206 (271)
|+-+.+.+.++. .+..+|+++++-++.
T Consensus 195 --p~~~~~~l~~~~~~LkpgG~l~~s~~~~ 222 (272)
T 3a27_A 195 --VHKTHKFLDKTFEFLKDRGVIHYHETVA 222 (272)
T ss_dssp --CSSGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred --cccHHHHHHHHHHHcCCCCEEEEEEcCc
Confidence 333445555544 346788998888765
No 195
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=53.08 E-value=13 Score=31.18 Aligned_cols=70 Identities=24% Similarity=0.357 Sum_probs=41.5
Q ss_pred cceeeecCCchhHhHhhhc--cccccccccccccc--cchhHHHHHHHhhce-eeeeeecCCCCCC--CCCccEEEeccc
Q 024173 102 HKVLHVGPDTCSVVSTLLK--EEETEAWGVEPYDI--EDADARCKSLVHKGI-VRVADIKFPLPYR--AKSFPLVIVSDA 174 (271)
Q Consensus 102 ~kVLHVGPdtC~VVs~LLk--Ee~tEAWGVEPydi--ed~d~~CKsLvrKGi-VRvADIkfpLPYR--~kSFslVivSDa 174 (271)
.+||-+|-.|-...+.|.+ ..+...+|||..+- ++.-..++. +.++ ...+|+.-|.+|. ..+|++|+ +|+
T Consensus 78 ~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~--r~nv~~i~~Da~~~~~~~~~~~~~D~I~-~d~ 154 (232)
T 3id6_C 78 TKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQR--RPNIFPLLADARFPQSYKSVVENVDVLY-VDI 154 (232)
T ss_dssp CEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHH--CTTEEEEECCTTCGGGTTTTCCCEEEEE-ECC
T ss_pred CEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhh--cCCeEEEEcccccchhhhccccceEEEE-ecC
Confidence 5799999887665555443 24568899987652 222222222 1232 3467887776664 35788775 453
No 196
>1njg_A DNA polymerase III subunit gamma; rossman-like fold, AAA+ ATPase domains, sensor 1, sensor 2, transferase; HET: DNA; 2.20A {Escherichia coli} SCOP: c.37.1.20 PDB: 1njf_A*
Probab=52.73 E-value=26 Score=25.64 Aligned_cols=85 Identities=13% Similarity=0.112 Sum_probs=49.5
Q ss_pred EEEecccccccChhhhcccccchhhcccCceEEEecC-CCchhhhHHh---hhhcCCccccccchhHHHHHHHhccccch
Q 024173 168 LVIVSDALDYLSPKYLNKTLPDLARVASDGVLIFAGY-PGQQRAKVAE---LSKFGRPAKMRSSSWWIRYFVQTSLEENE 243 (271)
Q Consensus 168 lVivSDaLDyLspryLNkTLPeLaRvsadglViF~G~-Pgqqrakvae---lskfgrpaK~rsssWW~r~F~qt~LeEnE 243 (271)
.||+=|=+|++++.-+|.-+.-|.+...+..+|+++. |.+-...... .-.|..+-.--...|+.+++.+.+..-++
T Consensus 128 ~vlviDe~~~l~~~~~~~l~~~l~~~~~~~~~i~~t~~~~~~~~~l~~r~~~i~l~~l~~~e~~~~l~~~~~~~~~~~~~ 207 (250)
T 1njg_A 128 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHEP 207 (250)
T ss_dssp EEEEEETGGGSCHHHHHHHHHHHHSCCTTEEEEEEESCGGGSCHHHHTTSEEEECCCCCHHHHHHHHHHHHHHTTCCBCH
T ss_pred eEEEEECcccccHHHHHHHHHHHhcCCCceEEEEEeCChHhCCHHHHHHhhhccCCCCCHHHHHHHHHHHHHhcCCCCCH
Confidence 5777788999999888876666666666778888874 3322111110 11122222222345666777677776666
Q ss_pred HHHHHHHHH
Q 024173 244 PAVKKFEQA 252 (271)
Q Consensus 244 ~a~KkFeqa 252 (271)
++.+..-+.
T Consensus 208 ~~~~~l~~~ 216 (250)
T 1njg_A 208 RALQLLARA 216 (250)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 666555443
No 197
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=51.27 E-value=26 Score=26.80 Aligned_cols=108 Identities=14% Similarity=0.166 Sum_probs=59.9
Q ss_pred HHHhHhHHHHHHhcccccceeeecCCchhHhHhhhccc--ccccccccccc--ccchhHHHHHHHhhce-----eeeeee
Q 024173 85 EIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEE--ETEAWGVEPYD--IEDADARCKSLVHKGI-----VRVADI 155 (271)
Q Consensus 85 eV~~AiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe--~tEAWGVEPyd--ied~d~~CKsLvrKGi-----VRvADI 155 (271)
+..+.+-.|.+.. .-.+||-+|-.+......|++.- +.+..|||+.+ ++-+..+.+ +.|+ +..+|.
T Consensus 43 ~~~~~l~~l~~~~--~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~---~~~~~~~v~~~~~d~ 117 (210)
T 3c3p_A 43 QTGRLLYLLARIK--QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLH---DNGLIDRVELQVGDP 117 (210)
T ss_dssp HHHHHHHHHHHHH--CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHH---HHSGGGGEEEEESCH
T ss_pred HHHHHHHHHHHhh--CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH---HCCCCceEEEEEecH
Confidence 3334444443332 23589999999998877776542 57889998753 233333333 2232 445666
Q ss_pred cCCCCCCCCCccEEEecccccccChhhhcccccchhh-cccCceEEEec
Q 024173 156 KFPLPYRAKSFPLVIVSDALDYLSPKYLNKTLPDLAR-VASDGVLIFAG 203 (271)
Q Consensus 156 kfpLPYR~kSFslVivSDaLDyLspryLNkTLPeLaR-vsadglViF~G 203 (271)
.-.+|.-.. |++|++. +-.--.+.+|+ ++.| +..+|++|+..
T Consensus 118 ~~~~~~~~~-fD~v~~~-~~~~~~~~~l~----~~~~~LkpgG~lv~~~ 160 (210)
T 3c3p_A 118 LGIAAGQRD-IDILFMD-CDVFNGADVLE----RMNRCLAKNALLIAVN 160 (210)
T ss_dssp HHHHTTCCS-EEEEEEE-TTTSCHHHHHH----HHGGGEEEEEEEEEES
T ss_pred HHHhccCCC-CCEEEEc-CChhhhHHHHH----HHHHhcCCCeEEEEEC
Confidence 444454456 9999864 21111133444 4433 45678888743
No 198
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=50.37 E-value=12 Score=30.17 Aligned_cols=113 Identities=15% Similarity=0.150 Sum_probs=63.2
Q ss_pred hHHHHhHhHHHHHHhcccccceeeecCCchhHhHhhhcc--ccccccccccccccchhHHHHHHH-hhce-----eeeee
Q 024173 83 TSEIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYDIEDADARCKSLV-HKGI-----VRVAD 154 (271)
Q Consensus 83 t~eV~~AiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkE--e~tEAWGVEPydied~d~~CKsLv-rKGi-----VRvAD 154 (271)
..+..+.+-.|-+..+ -++||-||..+......|++. ++.+..|||..+ +.-..++... +.|+ ++..|
T Consensus 55 ~~~~~~~l~~l~~~~~--~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~--~~~~~a~~~~~~~g~~~~i~~~~gd 130 (237)
T 3c3y_A 55 SPLAGQLMSFVLKLVN--AKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDR--EAYEIGLPFIRKAGVEHKINFIESD 130 (237)
T ss_dssp CHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCH--HHHHHHHHHHHHTTCGGGEEEEESC
T ss_pred CHHHHHHHHHHHHhhC--CCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCH--HHHHHHHHHHHHcCCCCcEEEEEcC
Confidence 3444555555544433 358999999998877777654 357888888653 2222333322 2343 34455
Q ss_pred ecCCCCC------CCCCccEEEecccccccChhhhcccccchhhcccCceEEEec
Q 024173 155 IKFPLPY------RAKSFPLVIVSDALDYLSPKYLNKTLPDLARVASDGVLIFAG 203 (271)
Q Consensus 155 IkfpLPY------R~kSFslVivSDaLDyLspryLNkTLPeLaRvsadglViF~G 203 (271)
..--+|- ...+|++|++ |+-.-..+.||+..++ .+..+|++++..
T Consensus 131 a~~~l~~l~~~~~~~~~fD~I~~-d~~~~~~~~~l~~~~~---~L~pGG~lv~d~ 181 (237)
T 3c3y_A 131 AMLALDNLLQGQESEGSYDFGFV-DADKPNYIKYHERLMK---LVKVGGIVAYDN 181 (237)
T ss_dssp HHHHHHHHHHSTTCTTCEEEEEE-CSCGGGHHHHHHHHHH---HEEEEEEEEEEC
T ss_pred HHHHHHHHHhccCCCCCcCEEEE-CCchHHHHHHHHHHHH---hcCCCeEEEEec
Confidence 4322331 1468999875 4432223455555442 355678887753
No 199
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=50.36 E-value=18 Score=29.16 Aligned_cols=117 Identities=13% Similarity=0.115 Sum_probs=62.9
Q ss_pred hHHHHhHhHHHHHHhccc-ccceeeecCCchhHhHhhhcc--cccccccccccc--ccchhHHHHHHHh---hceeeeee
Q 024173 83 TSEIQRAIPILKKAYGDS-MHKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKSLVH---KGIVRVAD 154 (271)
Q Consensus 83 t~eV~~AiP~LkkaYGds-M~kVLHVGPdtC~VVs~LLkE--e~tEAWGVEPyd--ied~d~~CKsLvr---KGiVRvAD 154 (271)
..+..+.+-.|-+..+.. -.+||-+|..+-..--.|.+. .+.+..|||..+ ++-+..+.+..-- +=-++.+|
T Consensus 38 ~~~~~~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gd 117 (221)
T 3dr5_A 38 DEMTGQLLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSR 117 (221)
T ss_dssp CHHHHHHHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSC
T ss_pred CHHHHHHHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcC
Confidence 455555666666655421 128999999987766666553 357888988754 2334444332111 11123444
Q ss_pred ecCCCC-CCCCCccEEEecccccccChhhhcccccchhhcccCceEEEec
Q 024173 155 IKFPLP-YRAKSFPLVIVSDALDYLSPKYLNKTLPDLARVASDGVLIFAG 203 (271)
Q Consensus 155 IkfpLP-YR~kSFslVivSDaLDyLspryLNkTLPeLaRvsadglViF~G 203 (271)
..-.+| ....+|++|++ |+-.---++|++..++ .+...|++++..
T Consensus 118 a~~~l~~~~~~~fD~V~~-d~~~~~~~~~l~~~~~---~LkpGG~lv~dn 163 (221)
T 3dr5_A 118 PLDVMSRLANDSYQLVFG-QVSPMDLKALVDAAWP---LLRRGGALVLAD 163 (221)
T ss_dssp HHHHGGGSCTTCEEEEEE-CCCTTTHHHHHHHHHH---HEEEEEEEEETT
T ss_pred HHHHHHHhcCCCcCeEEE-cCcHHHHHHHHHHHHH---HcCCCcEEEEeC
Confidence 422233 22679999976 4321112345544432 345677877744
No 200
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=48.84 E-value=30 Score=30.75 Aligned_cols=97 Identities=16% Similarity=0.302 Sum_probs=56.1
Q ss_pred cceeeecCCchhHhHhhhcc-ccccccccccccccchhHHHHHHHhh-ce----eeeeeecCCCCCCCCCccEEEecccc
Q 024173 102 HKVLHVGPDTCSVVSTLLKE-EETEAWGVEPYDIEDADARCKSLVHK-GI----VRVADIKFPLPYRAKSFPLVIVSDAL 175 (271)
Q Consensus 102 ~kVLHVGPdtC~VVs~LLkE-e~tEAWGVEPydied~d~~CKsLvrK-Gi----VRvADIkfpLPYR~kSFslVivSDaL 175 (271)
.+||-||=.+-..-+.++.. -+.+.-|||..+ +.-..++..+++ |+ +..+|.. .+| ..+|++|+++- +
T Consensus 124 ~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~--~~l~~Ar~~~~~~gl~~v~~v~gDa~-~l~--d~~FDvV~~~a-~ 197 (298)
T 3fpf_A 124 ERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEP--DIAELSRKVIEGLGVDGVNVITGDET-VID--GLEFDVLMVAA-L 197 (298)
T ss_dssp CEEEEECCCSSCHHHHHHHHTTCCEEEEEESSH--HHHHHHHHHHHHHTCCSEEEEESCGG-GGG--GCCCSEEEECT-T
T ss_pred CEEEEECCCccHHHHHHHHHccCCEEEEEECCH--HHHHHHHHHHHhcCCCCeEEEECchh-hCC--CCCcCEEEECC-C
Confidence 57999986553332233322 356777776532 233334444433 54 3345553 356 57899999753 3
Q ss_pred cccChhhhcccccchhhc-ccCceEEEecCCCch
Q 024173 176 DYLSPKYLNKTLPDLARV-ASDGVLIFAGYPGQQ 208 (271)
Q Consensus 176 DyLspryLNkTLPeLaRv-sadglViF~G~Pgqq 208 (271)
.| -..+.+.++.|+ ...|.+++...+|..
T Consensus 198 ---~~-d~~~~l~el~r~LkPGG~Lvv~~~~~~r 227 (298)
T 3fpf_A 198 ---AE-PKRRVFRNIHRYVDTETRIIYRTYTGMR 227 (298)
T ss_dssp ---CS-CHHHHHHHHHHHCCTTCEEEEEECCGGG
T ss_pred ---cc-CHHHHHHHHHHHcCCCcEEEEEcCcchh
Confidence 22 234688899986 566788877766653
No 201
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=47.21 E-value=23 Score=30.71 Aligned_cols=81 Identities=19% Similarity=0.250 Sum_probs=44.8
Q ss_pred ccccceeeec----CCchhHhHhhhccccccccccccccccchhHHHHHHHhhceeeeeeecCCCCCCCCCccEEEeccc
Q 024173 99 DSMHKVLHVG----PDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIVRVADIKFPLPYRAKSFPLVIVSDA 174 (271)
Q Consensus 99 dsM~kVLHVG----PdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvrKGiVRvADIkfpLPYR~kSFslVivSDa 174 (271)
+.|++||-|| |+.+..+..+|++...+ |+.-+.++... -+=--+.|++||.+|.
T Consensus 2 ~~m~~vLiV~g~~~~~~a~~l~~aL~~~g~~---V~~i~~~~~~~-------------------~~~~L~~yDvIIl~d~ 59 (259)
T 3rht_A 2 NAMTRVLYCGDTSLETAAGYLAGLMTSWQWE---FDYIPSHVGLD-------------------VGELLAKQDLVILSDY 59 (259)
T ss_dssp ----CEEEEESSCTTTTHHHHHHHHHHTTCC---CEEECTTSCBC-------------------SSHHHHTCSEEEEESC
T ss_pred CCCceEEEECCCCchhHHHHHHHHHHhCCce---EEEeccccccc-------------------ChhHHhcCCEEEEcCC
Confidence 4699999998 55667777777654433 22212111100 0011257999999985
Q ss_pred cc-ccChhhhcccccchhhcccCceEEEec
Q 024173 175 LD-YLSPKYLNKTLPDLARVASDGVLIFAG 203 (271)
Q Consensus 175 LD-yLspryLNkTLPeLaRvsadglViF~G 203 (271)
=. .|+|.++. .|-+.++ .--|+|++.|
T Consensus 60 ~~~~l~~~~~~-~L~~yV~-~GGgLi~~gG 87 (259)
T 3rht_A 60 PAERMTAQAID-QLVTMVK-AGCGLVMLGG 87 (259)
T ss_dssp CGGGBCHHHHH-HHHHHHH-TTCEEEEECS
T ss_pred ccccCCHHHHH-HHHHHHH-hCCeEEEecC
Confidence 42 47776663 5666676 4566666666
No 202
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=46.88 E-value=21 Score=32.78 Aligned_cols=94 Identities=15% Similarity=0.200 Sum_probs=54.7
Q ss_pred cceeeecCCchhHhHhhhccccccccccccccccchhHHHHHHHh-hce---e--eeeeec-CCCCCCCCCccEEEeccc
Q 024173 102 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVH-KGI---V--RVADIK-FPLPYRAKSFPLVIVSDA 174 (271)
Q Consensus 102 ~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvr-KGi---V--RvADIk-fpLPYR~kSFslVivSDa 174 (271)
.+||-||-.|-.+.-.|.+....+..|||..++ + ..++..++ .|+ | ..+|+. +++| .+|++||..-.
T Consensus 160 ~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~~--l-~~A~~~~~~~gl~~~v~~~~~d~~~~~~~---~~fD~Ivs~~~ 233 (480)
T 3b3j_A 160 KIVLDVGCGSGILSFFAAQAGARKIYAVEASTM--A-QHAEVLVKSNNLTDRIVVIPGKVEEVSLP---EQVDIIISEPM 233 (480)
T ss_dssp CEEEEESCSTTHHHHHHHHTTCSEEEEEECHHH--H-HHHHHHHHHTTCTTTEEEEESCTTTCCCS---SCEEEEECCCC
T ss_pred CEEEEecCcccHHHHHHHHcCCCEEEEEEcHHH--H-HHHHHHHHHcCCCCcEEEEECchhhCccC---CCeEEEEEeCc
Confidence 589999999987776666655568899987652 2 23333332 343 3 345553 2444 57998875434
Q ss_pred ccccChhhhcccccchhhc-ccCceEEE
Q 024173 175 LDYLSPKYLNKTLPDLARV-ASDGVLIF 201 (271)
Q Consensus 175 LDyLspryLNkTLPeLaRv-sadglViF 201 (271)
+.++...-+-.++-++.|+ ..+|++++
T Consensus 234 ~~~~~~e~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 234 GYMLFNERMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp HHHHTCHHHHHHHHHGGGGEEEEEEEES
T ss_pred hHhcCcHHHHHHHHHHHHhcCCCCEEEE
Confidence 3445433333344444554 55677664
No 203
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=46.64 E-value=34 Score=26.26 Aligned_cols=116 Identities=15% Similarity=0.134 Sum_probs=63.4
Q ss_pred cchHHHHhHhHHHHHHhcccccceeeecCCchhHhHhhhccc--ccccccccccc--ccchhHHHHHHHhhc--eeeeee
Q 024173 81 SCTSEIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEE--ETEAWGVEPYD--IEDADARCKSLVHKG--IVRVAD 154 (271)
Q Consensus 81 sct~eV~~AiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe--~tEAWGVEPyd--ied~d~~CKsLvrKG--iVRvAD 154 (271)
..+.+..+.+-.|-+... -.+||-+|-.+-.....|.+.- ..+..|||..+ ++-+..+++..--.. -+...|
T Consensus 41 ~~~~~~~~~l~~l~~~~~--~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d 118 (223)
T 3duw_A 41 DVSPTQGKFLQLLVQIQG--ARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGL 118 (223)
T ss_dssp SCCHHHHHHHHHHHHHHT--CSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESC
T ss_pred ccCHHHHHHHHHHHHhhC--CCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcC
Confidence 344555555555544332 3689999999988877777652 56888888654 333444443221111 134566
Q ss_pred ecCCCCC---CC-CCccEEEecccccccChhhhcccccchhh-cccCceEEEec
Q 024173 155 IKFPLPY---RA-KSFPLVIVSDALDYLSPKYLNKTLPDLAR-VASDGVLIFAG 203 (271)
Q Consensus 155 IkfpLPY---R~-kSFslVivSDaLDyLspryLNkTLPeLaR-vsadglViF~G 203 (271)
+.-.+|- .. .+|++|++ |+-.--.+.||+ ++.| +..+|++++..
T Consensus 119 ~~~~~~~~~~~~~~~fD~v~~-d~~~~~~~~~l~----~~~~~L~pgG~lv~~~ 167 (223)
T 3duw_A 119 ALDSLQQIENEKYEPFDFIFI-DADKQNNPAYFE----WALKLSRPGTVIIGDN 167 (223)
T ss_dssp HHHHHHHHHHTTCCCCSEEEE-CSCGGGHHHHHH----HHHHTCCTTCEEEEES
T ss_pred HHHHHHHHHhcCCCCcCEEEE-cCCcHHHHHHHH----HHHHhcCCCcEEEEeC
Confidence 5333332 11 57999875 332212234444 4333 45678777754
No 204
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=46.55 E-value=10 Score=29.95 Aligned_cols=94 Identities=15% Similarity=0.244 Sum_probs=53.4
Q ss_pred cceeeecCCchhHhHhhhccc--ccccccccccc--ccchhHHHHHHHhhce-----eeeeeecCCCCCC----------
Q 024173 102 HKVLHVGPDTCSVVSTLLKEE--ETEAWGVEPYD--IEDADARCKSLVHKGI-----VRVADIKFPLPYR---------- 162 (271)
Q Consensus 102 ~kVLHVGPdtC~VVs~LLkEe--~tEAWGVEPyd--ied~d~~CKsLvrKGi-----VRvADIkfpLPYR---------- 162 (271)
.+||-+|-.+......|++.- ..+..|||+.+ ++-+..+++. .|+ +..+|+.-.+|.-
T Consensus 62 ~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~---~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 138 (239)
T 2hnk_A 62 KRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKE---NGLENKIFLKLGSALETLQVLIDSKSAPSWA 138 (239)
T ss_dssp SEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHH---TTCGGGEEEEESCHHHHHHHHHHCSSCCGGG
T ss_pred CEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH---cCCCCCEEEEECCHHHHHHHHHhhccccccc
Confidence 589999999888777777653 57888988653 2333333322 232 3445553333311
Q ss_pred -----C-CCccEEEecccccccChhhhcccccchhh-cccCceEEEec
Q 024173 163 -----A-KSFPLVIVSDALDYLSPKYLNKTLPDLAR-VASDGVLIFAG 203 (271)
Q Consensus 163 -----~-kSFslVivSDaLDyLspryLNkTLPeLaR-vsadglViF~G 203 (271)
. .+|++|++.-..+.+ +++ +.++.| +..+|++++.-
T Consensus 139 ~~f~~~~~~fD~I~~~~~~~~~-~~~----l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 139 SDFAFGPSSIDLFFLDADKENY-PNY----YPLILKLLKPGGLLIADN 181 (239)
T ss_dssp TTTCCSTTCEEEEEECSCGGGH-HHH----HHHHHHHEEEEEEEEEEC
T ss_pred ccccCCCCCcCEEEEeCCHHHH-HHH----HHHHHHHcCCCeEEEEEc
Confidence 1 689999875332211 233 444444 35677777753
No 205
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=46.03 E-value=29 Score=27.56 Aligned_cols=111 Identities=16% Similarity=0.233 Sum_probs=59.4
Q ss_pred hHHHHhHhHHHHHHhcccccceeeecCCchhHhHhhhcc--cccccccccccc--ccchhHHHHHHHhhce-----eeee
Q 024173 83 TSEIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKSLVHKGI-----VRVA 153 (271)
Q Consensus 83 t~eV~~AiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkE--e~tEAWGVEPyd--ied~d~~CKsLvrKGi-----VRvA 153 (271)
..+..+.+-.|-+... -.+||-||-.+......|++. ++.+..|||+.+ ++-+..+++ +.|+ +..+
T Consensus 57 ~~~~~~~l~~l~~~~~--~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~---~~g~~~~i~~~~~ 131 (232)
T 3cbg_A 57 SPEQAQFLGLLISLTG--AKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQ---KAGVAEKISLRLG 131 (232)
T ss_dssp CHHHHHHHHHHHHHHT--CCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHH---HHTCGGGEEEEES
T ss_pred CHHHHHHHHHHHHhcC--CCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH---HcCCCCcEEEEEc
Confidence 3444444444443332 258999999988877777664 256888888653 222333332 2232 3445
Q ss_pred eecC---CCCCCC--CCccEEEecccccccChhhhcccccchhhcccCceEEEe
Q 024173 154 DIKF---PLPYRA--KSFPLVIVSDALDYLSPKYLNKTLPDLARVASDGVLIFA 202 (271)
Q Consensus 154 DIkf---pLPYR~--kSFslVivSDaLDyLspryLNkTLPeLaRvsadglViF~ 202 (271)
|..- .+|... .+|++|++ |+-.--.+.|++..+ ..+..+|++|+.
T Consensus 132 d~~~~l~~l~~~~~~~~fD~V~~-d~~~~~~~~~l~~~~---~~LkpgG~lv~~ 181 (232)
T 3cbg_A 132 PALATLEQLTQGKPLPEFDLIFI-DADKRNYPRYYEIGL---NLLRRGGLMVID 181 (232)
T ss_dssp CHHHHHHHHHTSSSCCCEEEEEE-CSCGGGHHHHHHHHH---HTEEEEEEEEEE
T ss_pred CHHHHHHHHHhcCCCCCcCEEEE-CCCHHHHHHHHHHHH---HHcCCCeEEEEe
Confidence 5421 233333 78999875 432111134444443 234567788774
No 206
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=39.97 E-value=22 Score=28.85 Aligned_cols=121 Identities=15% Similarity=0.178 Sum_probs=68.6
Q ss_pred cchHHHHhHhHHHHHHhcccccceeeecCCchhHhHhhhcc--cccccccccccc--ccchhHHHHHHHh--hceeeeee
Q 024173 81 SCTSEIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKSLVH--KGIVRVAD 154 (271)
Q Consensus 81 sct~eV~~AiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkE--e~tEAWGVEPyd--ied~d~~CKsLvr--KGiVRvAD 154 (271)
..+.+..+.+-.|-+..+ -++||-+|-.+-...-.|.+. ++.+..|||..+ ++-+..+++..=- +=-++.+|
T Consensus 43 ~i~~~~~~~l~~l~~~~~--~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd 120 (242)
T 3r3h_A 43 QVAPEQAQFMQMLIRLTR--AKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGP 120 (242)
T ss_dssp SCCHHHHHHHHHHHHHHT--CSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESC
T ss_pred ccCHHHHHHHHHHHhhcC--cCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcC
Confidence 344555555544444333 368999999987766666652 367889998654 5666666654321 11244566
Q ss_pred ecCCCCCC-----CCCccEEEecccccccChhhhcccccchhhcccCceEEEec--CCCc
Q 024173 155 IKFPLPYR-----AKSFPLVIVSDALDYLSPKYLNKTLPDLARVASDGVLIFAG--YPGQ 207 (271)
Q Consensus 155 IkfpLPYR-----~kSFslVivSDaLDyLspryLNkTLPeLaRvsadglViF~G--~Pgq 207 (271)
..-.+|.- ..+|++|++. +-.--.++||...+ ..+...|++++.. ++|.
T Consensus 121 a~~~l~~~~~~~~~~~fD~V~~d-~~~~~~~~~l~~~~---~~LkpGG~lv~d~~~~~g~ 176 (242)
T 3r3h_A 121 ALDTLHSLLNEGGEHQFDFIFID-ADKTNYLNYYELAL---KLVTPKGLIAIDNIFWDGK 176 (242)
T ss_dssp HHHHHHHHHHHHCSSCEEEEEEE-SCGGGHHHHHHHHH---HHEEEEEEEEEECSSSSSC
T ss_pred HHHHHHHHhhccCCCCEeEEEEc-CChHHhHHHHHHHH---HhcCCCeEEEEECCccCCc
Confidence 64444432 4789998763 32111223444332 2346678888743 5553
No 207
>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6
Probab=39.60 E-value=48 Score=24.93 Aligned_cols=6 Identities=17% Similarity=0.551 Sum_probs=3.2
Q ss_pred eEEEec
Q 024173 198 VLIFAG 203 (271)
Q Consensus 198 lViF~G 203 (271)
+||++|
T Consensus 35 ~vi~~G 40 (228)
T 1uf3_A 35 AIALIG 40 (228)
T ss_dssp EEEEES
T ss_pred EEEECC
Confidence 455555
No 208
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=38.32 E-value=24 Score=29.83 Aligned_cols=64 Identities=23% Similarity=0.351 Sum_probs=38.2
Q ss_pred cceeeecCCchhHhHhhhcccccccccccccc--ccchhHHHHHHHhhce----eeeeee-cCCCCCCCCCccEEEeccc
Q 024173 102 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGI----VRVADI-KFPLPYRAKSFPLVIVSDA 174 (271)
Q Consensus 102 ~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvrKGi----VRvADI-kfpLPYR~kSFslVivSDa 174 (271)
.+||-||+.+-.....|++. ..+..|||..+ ++.+..+++ +.|+ +..+|+ +++++ +|++||. |.
T Consensus 44 ~~VLDiG~G~G~lt~~La~~-~~~v~~vDi~~~~~~~a~~~~~---~~~~~~v~~~~~D~~~~~~~----~~D~Vv~-n~ 114 (299)
T 2h1r_A 44 DIVLEIGCGTGNLTVKLLPL-AKKVITIDIDSRMISEVKKRCL---YEGYNNLEVYEGDAIKTVFP----KFDVCTA-NI 114 (299)
T ss_dssp CEEEEECCTTSTTHHHHTTT-SSEEEEECSCHHHHHHHHHHHH---HTTCCCEEC----CCSSCCC----CCSEEEE-EC
T ss_pred CEEEEEcCcCcHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHH---HcCCCceEEEECchhhCCcc----cCCEEEE-cC
Confidence 58999999999988888765 56888888643 233333332 2232 344665 44433 7987765 44
No 209
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=37.47 E-value=22 Score=30.50 Aligned_cols=41 Identities=17% Similarity=0.331 Sum_probs=33.6
Q ss_pred CCCccEEEecccccccChhhhcccccchhhcccCceEEEec
Q 024173 163 AKSFPLVIVSDALDYLSPKYLNKTLPDLARVASDGVLIFAG 203 (271)
Q Consensus 163 ~kSFslVivSDaLDyLspryLNkTLPeLaRvsadglViF~G 203 (271)
..+|++|+..+.|-|++|.-..+.+..+.++=..|=++|.|
T Consensus 211 ~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 211 PGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp CCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred CCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 46799999999999999998899999999875554444555
No 210
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=35.45 E-value=31 Score=30.55 Aligned_cols=70 Identities=14% Similarity=0.240 Sum_probs=41.7
Q ss_pred cceeeecCCchhHhHhhhcccc-cccccccccc--ccchhHHHHHHHhhceeeeeeecCCCC-CCCCCccEEEe
Q 024173 102 HKVLHVGPDTCSVVSTLLKEEE-TEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLP-YRAKSFPLVIV 171 (271)
Q Consensus 102 ~kVLHVGPdtC~VVs~LLkEe~-tEAWGVEPyd--ied~d~~CKsLvrKGiVRvADIkfpLP-YR~kSFslViv 171 (271)
.+||-+|-.+-.....|.+... .+..|+|..+ ++.+..+++.+--.--+..+|..-..+ +...+|++|++
T Consensus 248 ~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~~~~~~~fD~Vl~ 321 (429)
T 1sqg_A 248 EHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILL 321 (429)
T ss_dssp CEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHHTTCCEEEEEE
T ss_pred CeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchhhcccCCCCEEEE
Confidence 4799998888777666665432 5777777554 444555544321112345566644322 34468999886
No 211
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=34.90 E-value=29 Score=30.91 Aligned_cols=98 Identities=14% Similarity=0.230 Sum_probs=55.8
Q ss_pred ceeeecCCchhHhHhhhc-cccccccccccccccchhHHHHHHHh-----hceeeeeeec-CCCCCCCCCccEEEecccc
Q 024173 103 KVLHVGPDTCSVVSTLLK-EEETEAWGVEPYDIEDADARCKSLVH-----KGIVRVADIK-FPLPYRAKSFPLVIVSDAL 175 (271)
Q Consensus 103 kVLHVGPdtC~VVs~LLk-Ee~tEAWGVEPydied~d~~CKsLvr-----KGiVRvADIk-fpLPYR~kSFslVivSDaL 175 (271)
+||++|-.++.+...|++ -.+.+.-+||.-. ++-..|+.-.. +--|.++|.. |.-.+..++|++||+ |+.
T Consensus 92 rVLdIG~G~G~la~~la~~~p~~~v~~VEidp--~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~-D~~ 168 (317)
T 3gjy_A 92 RITHLGGGACTMARYFADVYPQSRNTVVELDA--ELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIR-DVF 168 (317)
T ss_dssp EEEEESCGGGHHHHHHHHHSTTCEEEEEESCH--HHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEE-CCS
T ss_pred EEEEEECCcCHHHHHHHHHCCCcEEEEEECCH--HHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEE-CCC
Confidence 899999999999999998 3455666765421 13333443321 2235667753 322344678998875 554
Q ss_pred cccC-hhhh--cccccchh-hcccCceEEEec
Q 024173 176 DYLS-PKYL--NKTLPDLA-RVASDGVLIFAG 203 (271)
Q Consensus 176 DyLs-pryL--NkTLPeLa-RvsadglViF~G 203 (271)
+... |..| -..+-++. ++..+|++++.-
T Consensus 169 ~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~ 200 (317)
T 3gjy_A 169 AGAITPQNFTTVEFFEHCHRGLAPGGLYVANC 200 (317)
T ss_dssp TTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEE
T ss_pred CccccchhhhHHHHHHHHHHhcCCCcEEEEEe
Confidence 4321 2222 11222333 466788877654
No 212
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=33.54 E-value=43 Score=29.14 Aligned_cols=103 Identities=17% Similarity=0.130 Sum_probs=54.8
Q ss_pred cceeeecC--------CchhHhHhhhccccccccccccccccchhHHHHHHHhhcee-eeeeecCCCCCCCCCccEEEec
Q 024173 102 HKVLHVGP--------DTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHKGIV-RVADIKFPLPYRAKSFPLVIVS 172 (271)
Q Consensus 102 ~kVLHVGP--------dtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvrKGiV-RvADIkfpLPYR~kSFslVivS 172 (271)
.+||.+|= .+ .+.++++. .+.+..|||..+. +..=-+ ..+|+.- +|+. .+|++|+ |
T Consensus 65 ~~VLDLGcGsg~~~GpGs-~~~a~~~~-~~~~V~gvDis~~----------v~~v~~~i~gD~~~-~~~~-~~fD~Vv-s 129 (290)
T 2xyq_A 65 MRVIHFGAGSDKGVAPGT-AVLRQWLP-TGTLLVDSDLNDF----------VSDADSTLIGDCAT-VHTA-NKWDLII-S 129 (290)
T ss_dssp CEEEEESCCCTTSBCHHH-HHHHHHSC-TTCEEEEEESSCC----------BCSSSEEEESCGGG-CCCS-SCEEEEE-E
T ss_pred CEEEEeCCCCCCCCCcHH-HHHHHHcC-CCCEEEEEECCCC----------CCCCEEEEECcccc-CCcc-CcccEEE-E
Confidence 36999987 44 55555554 2457888877665 111113 4477742 3332 6899988 5
Q ss_pred ccc---------cccChhh-hcccccchhhcc-cCceEEEecCCC-chhhhHHhhhhcC
Q 024173 173 DAL---------DYLSPKY-LNKTLPDLARVA-SDGVLIFAGYPG-QQRAKVAELSKFG 219 (271)
Q Consensus 173 DaL---------DyLspry-LNkTLPeLaRvs-adglViF~G~Pg-qqrakvaelskfg 219 (271)
|.. |+....+ +...|.+..|+= ..|.++|.-+-+ +...-...+.++|
T Consensus 130 n~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~~~~~l~~~l~~~G 188 (290)
T 2xyq_A 130 DMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWNADLYKLMGHFS 188 (290)
T ss_dssp CCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCCHHHHHHHTTEE
T ss_pred cCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccCCHHHHHHHHHHcC
Confidence 532 2222111 124566666654 567777755333 3323334455553
No 213
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=32.96 E-value=13 Score=29.95 Aligned_cols=68 Identities=16% Similarity=0.234 Sum_probs=42.3
Q ss_pred cceeeecCCchhHhHhhhcccccccccccccc--ccchhHHHHHHHhhceeeeeeecCCCCCCC-CCccEEEeccc
Q 024173 102 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSLVHKGIVRVADIKFPLPYRA-KSFPLVIVSDA 174 (271)
Q Consensus 102 ~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsLvrKGiVRvADIkfpLPYR~-kSFslVivSDa 174 (271)
.+||-+|+.+..+...|.+.. .+..|||.-+ ++-+..+++ ...+--+..+|+. .+|+.. .+| +|++|.
T Consensus 31 ~~VLDiG~G~G~~~~~l~~~~-~~v~~id~~~~~~~~a~~~~~-~~~~v~~~~~D~~-~~~~~~~~~f--~vv~n~ 101 (245)
T 1yub_A 31 DTVYEIGTGKGHLTTKLAKIS-KQVTSIELDSHLFNLSSEKLK-LNTRVTLIHQDIL-QFQFPNKQRY--KIVGNI 101 (245)
T ss_dssp EEEEECSCCCSSCSHHHHHHS-SEEEESSSSCSSSSSSSCTTT-TCSEEEECCSCCT-TTTCCCSSEE--EEEEEC
T ss_pred CEEEEEeCCCCHHHHHHHHhC-CeEEEEECCHHHHHHHHHHhc-cCCceEEEECChh-hcCcccCCCc--EEEEeC
Confidence 579999999998887777664 7889998653 344444544 1112234456763 234432 577 566663
No 214
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=32.59 E-value=62 Score=27.43 Aligned_cols=117 Identities=10% Similarity=0.095 Sum_probs=63.3
Q ss_pred cceeeecCCchhHhHhhhcc--cccccccccccc--ccchhHHHHHHHhhc-eeeeeeecCCCCCCCCCccEEEec----
Q 024173 102 HKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKSLVHKG-IVRVADIKFPLPYRAKSFPLVIVS---- 172 (271)
Q Consensus 102 ~kVLHVGPdtC~VVs~LLkE--e~tEAWGVEPyd--ied~d~~CKsLvrKG-iVRvADIkfpLPYR~kSFslVivS---- 172 (271)
.+||-+|-.+-..-..|.+. ...+..|+|..+ ++.+..+++.+--.. .+..+|+.-..+ -..+|++|++-
T Consensus 120 ~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~-~~~~fD~Il~d~Pcs 198 (315)
T 1ixk_A 120 EIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGE-LNVEFDKILLDAPCT 198 (315)
T ss_dssp CEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGG-GCCCEEEEEEECCTT
T ss_pred CEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhccc-ccccCCEEEEeCCCC
Confidence 47999998887776666653 346788887653 444555554331111 234466543222 34579998861
Q ss_pred ---------ccccccChhhhc-------ccccchhhc-ccCceEEEec---CCCchhhhHHhh-hhcC
Q 024173 173 ---------DALDYLSPKYLN-------KTLPDLARV-ASDGVLIFAG---YPGQQRAKVAEL-SKFG 219 (271)
Q Consensus 173 ---------DaLDyLspryLN-------kTLPeLaRv-sadglViF~G---~Pgqqrakvael-skfg 219 (271)
|+....++..+. +.|-++.|+ ..+|.++++. .|.+...-++++ .++|
T Consensus 199 g~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~~Ene~~v~~~l~~~~ 266 (315)
T 1ixk_A 199 GSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEPEENEFVIQWALDNFD 266 (315)
T ss_dssp STTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCGGGTHHHHHHHHHHSS
T ss_pred CcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCChHHhHHHHHHHHhcCC
Confidence 222223443332 344555554 5678888853 565554555543 3443
No 215
>4fx0_A Probable transcriptional repressor protein; helix-turn-helix, DNA binding, transcription regulator; 2.70A {Mycobacterium tuberculosis} PDB: 4fx4_A*
Probab=31.70 E-value=17 Score=27.39 Aligned_cols=66 Identities=21% Similarity=0.273 Sum_probs=41.5
Q ss_pred HHHhHhHHHHHHhcccccceeeecCCchhHhHhhhccccc-----------cccccccccccchhHHHHHHHhhceeeee
Q 024173 85 EIQRAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEEET-----------EAWGVEPYDIEDADARCKSLVHKGIVRVA 153 (271)
Q Consensus 85 eV~~AiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe~t-----------EAWGVEPydied~d~~CKsLvrKGiVRvA 153 (271)
.+.+|--.+.+.|...+++ +.+.|....|...|-..+.. +.-|++|- .+....+.|+++|+||..
T Consensus 10 ~l~ra~r~~~~~~~~~l~~-~gLt~~q~~vL~~l~~~~~~~~~~~t~~eLa~~l~~~~~---tvsr~v~~Le~~glVr~~ 85 (148)
T 4fx0_A 10 TTRRAARQLGQAYDRALRP-SGLTNTQFSTLAVISLSEGSAGIDLTMSELAARIGVERT---TLTRNLEVMRRDGLVRVM 85 (148)
T ss_dssp HHHHHHHHHHHHHHHHHGG-GTCCHHHHHHHHHHHC---------CHHHHHHHHTCCHH---HHHHHHHHHHHTTSBC--
T ss_pred HHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHhcCCCCCCcCHHHHHHHHCCChh---hHHHHHHHHHHCCCEEee
Confidence 4677777777777776654 45667777777777655443 33444443 356788999999999976
Q ss_pred e
Q 024173 154 D 154 (271)
Q Consensus 154 D 154 (271)
|
T Consensus 86 ~ 86 (148)
T 4fx0_A 86 A 86 (148)
T ss_dssp -
T ss_pred C
Confidence 5
No 216
>2chg_A Replication factor C small subunit; DNA-binding protein, DNA replication, clamp loader, AAA+ ATPase, ATP-binding, nucleotide-binding; HET: ANP; 2.1A {Archaeoglobus fulgidus}
Probab=30.68 E-value=88 Score=22.68 Aligned_cols=84 Identities=10% Similarity=0.043 Sum_probs=45.3
Q ss_pred EEEecccccccChhhhcccccchhhcccCceEEEecCCCc-hhhhHHh---hhhcCCccccccchhHHHHHHHhccccch
Q 024173 168 LVIVSDALDYLSPKYLNKTLPDLARVASDGVLIFAGYPGQ-QRAKVAE---LSKFGRPAKMRSSSWWIRYFVQTSLEENE 243 (271)
Q Consensus 168 lVivSDaLDyLspryLNkTLPeLaRvsadglViF~G~Pgq-qrakvae---lskfgrpaK~rsssWW~r~F~qt~LeEnE 243 (271)
.||+=|=+|.+++.-+|.-+.-+.+...+..+|+++...+ ....+.. .-.|..+-.--...|+.+++.+.++.-.+
T Consensus 104 ~vliiDe~~~l~~~~~~~l~~~l~~~~~~~~~i~~~~~~~~~~~~l~~r~~~i~~~~~~~~~~~~~l~~~~~~~~~~~~~ 183 (226)
T 2chg_A 104 KIIFLDEADALTADAQAALRRTMEMYSKSCRFILSCNYVSRIIEPIQSRCAVFRFKPVPKEAMKKRLLEICEKEGVKITE 183 (226)
T ss_dssp EEEEEETGGGSCHHHHHHHHHHHHHTTTTEEEEEEESCGGGSCHHHHTTSEEEECCCCCHHHHHHHHHHHHHHHTCCBCH
T ss_pred eEEEEeChhhcCHHHHHHHHHHHHhcCCCCeEEEEeCChhhcCHHHHHhCceeecCCCCHHHHHHHHHHHHHHcCCCCCH
Confidence 4566677899999877665555555566777888774332 2111110 11122222222235666666666766556
Q ss_pred HHHHHHHH
Q 024173 244 PAVKKFEQ 251 (271)
Q Consensus 244 ~a~KkFeq 251 (271)
++.+...+
T Consensus 184 ~~~~~l~~ 191 (226)
T 2chg_A 184 DGLEALIY 191 (226)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66555443
No 217
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=30.65 E-value=40 Score=28.18 Aligned_cols=65 Identities=26% Similarity=0.337 Sum_probs=39.6
Q ss_pred cceeeecCCchhHhHhhhcccccccccccccc--ccchhHHHHHH--Hhhceeeeeeec-CCCCCCCCCccEEEe
Q 024173 102 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYD--IEDADARCKSL--VHKGIVRVADIK-FPLPYRAKSFPLVIV 171 (271)
Q Consensus 102 ~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPyd--ied~d~~CKsL--vrKGiVRvADIk-fpLPYR~kSFslViv 171 (271)
.+||-|||.+......|++. ..+..|||+.+ ++-+..+++.. -.+=-+..+|+- +++| +|+.|+.
T Consensus 30 ~~VLDiG~G~G~lt~~L~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~~----~fD~vv~ 99 (285)
T 1zq9_A 30 DVVLEVGPGTGNMTVKLLEK-AKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDLP----FFDTCVA 99 (285)
T ss_dssp CEEEEECCTTSTTHHHHHHH-SSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCCC----CCSEEEE
T ss_pred CEEEEEcCcccHHHHHHHhh-CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecccch----hhcEEEE
Confidence 57999999999988888865 45788888642 22222222211 011224557763 4555 6887665
No 218
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=30.20 E-value=51 Score=29.05 Aligned_cols=182 Identities=16% Similarity=0.177 Sum_probs=104.5
Q ss_pred hhccCCCccCCccchhhhhc---ccccccccccCccchHHHHhHhHHHHHHhcccccceeeecCCc--hhHhHhhhcc--
Q 024173 49 YAFSGSGIFGGDKAAVSRIE---GELCLHLVHCDFSCTSEIQRAIPILKKAYGDSMHKVLHVGPDT--CSVVSTLLKE-- 121 (271)
Q Consensus 49 Y~ysgsg~~~~~~~avs~~e---g~l~~h~~h~d~sct~eV~~AiP~LkkaYGdsM~kVLHVGPdt--C~VVs~LLkE-- 121 (271)
|+-+|.--|--|+++-.++. +++-. ..-.-..=..||+-+|...- .++.||-+|=.+ -.-+..++++
T Consensus 30 ~~LgGk~n~~~Dr~~~~~~~~~~P~~~~----~a~~nr~fl~rav~~l~~~~--g~~q~LDLGcG~pT~~~~~~la~~~~ 103 (277)
T 3giw_A 30 YIIGGKDYYPADKEAGDAMSREWPALPV----HMRANRDWMNRAVAHLAKEA--GIRQFLDIGTGIPTSPNLHEIAQSVA 103 (277)
T ss_dssp HHTTCSCCCHHHHHHHHHHHHHCTTHHH----HHHHHHHHHHHHHHHHHHTS--CCCEEEEESCCSCCSSCHHHHHHHHC
T ss_pred eecCCccCCHHHHHHHHHHHHhCCCHHH----HHHHHHHHHHHHHHHhcccc--CCCEEEEeCCCCCcccHHHHHHHHHC
Confidence 66677777766776554443 21100 00111233455666665433 468899998553 3233444332
Q ss_pred ccccccccccccccchhHHHHHHHhh-c----eeeeeeecCC---C--CCCCCCcc-----EEEecccccccChhh-hcc
Q 024173 122 EETEAWGVEPYDIEDADARCKSLVHK-G----IVRVADIKFP---L--PYRAKSFP-----LVIVSDALDYLSPKY-LNK 185 (271)
Q Consensus 122 e~tEAWGVEPydied~d~~CKsLvrK-G----iVRvADIkfp---L--PYR~kSFs-----lVivSDaLDyLspry-LNk 185 (271)
.+.+.-||+.-. ..=..++.+... + -+..+|+.-+ | |-...+|. .|+..-+|-||.+.. ...
T Consensus 104 P~arVv~VD~sp--~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~~p~~ 181 (277)
T 3giw_A 104 PESRVVYVDNDP--IVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDEDDAVG 181 (277)
T ss_dssp TTCEEEEEECCH--HHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGGCHHH
T ss_pred CCCEEEEEeCCh--HHHHHHHHHhccCCCCcEEEEEecccChhhhhcccccccccCcCCcchHHhhhhHhcCCchhhHHH
Confidence 344555654322 133456666543 1 2456888654 1 11124454 477777799998765 467
Q ss_pred cccchhhccc-CceEEEec-----CCCchhhhHHhhhhcCCccccccchhHHHHHHHhccc
Q 024173 186 TLPDLARVAS-DGVLIFAG-----YPGQQRAKVAELSKFGRPAKMRSSSWWIRYFVQTSLE 240 (271)
Q Consensus 186 TLPeLaRvsa-dglViF~G-----~PgqqrakvaelskfgrpaK~rsssWW~r~F~qt~Le 240 (271)
.|.++.++-+ .|.++++- .|...++-......-|-|..+|+..=+.+||. |||
T Consensus 182 ~l~~l~~~L~PGG~Lvls~~~~d~~p~~~~~~~~~~~~~g~p~~~rs~~ei~~~f~--Gle 240 (277)
T 3giw_A 182 IVRRLLEPLPSGSYLAMSIGTAEFAPQEVGRVAREYAARNMPMRLRTHAEAEEFFE--GLE 240 (277)
T ss_dssp HHHHHHTTSCTTCEEEEEEECCTTSHHHHHHHHHHHHHTTCCCCCCCHHHHHHTTT--TSE
T ss_pred HHHHHHHhCCCCcEEEEEeccCCCCHHHHHHHHHHHHhcCCCCccCCHHHHHHHhC--CCc
Confidence 8888888765 56666652 23333444445567788999999999999994 777
No 219
>2kwt_A Protease NS2-3; NS2 domain, membrane protein, viral prote; NMR {Hepatitis c virus}
Probab=29.68 E-value=20 Score=23.76 Aligned_cols=11 Identities=36% Similarity=1.407 Sum_probs=8.8
Q ss_pred chhHHHHHHHh
Q 024173 227 SSWWIRYFVQT 237 (271)
Q Consensus 227 ssWW~r~F~qt 237 (271)
.-||.+||+.-
T Consensus 7 ~lWWlqYfi~R 17 (33)
T 2kwt_A 7 LIWWLQYFITR 17 (33)
T ss_dssp THHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 46999999853
No 220
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=29.32 E-value=68 Score=28.70 Aligned_cols=67 Identities=13% Similarity=0.152 Sum_probs=39.8
Q ss_pred cceeeecCCchhHhHhhhcc--cccccccccccc--ccchhHHHHHHHhhce--e--eeeeecCCCC-CCCCCccEEEe
Q 024173 102 HKVLHVGPDTCSVVSTLLKE--EETEAWGVEPYD--IEDADARCKSLVHKGI--V--RVADIKFPLP-YRAKSFPLVIV 171 (271)
Q Consensus 102 ~kVLHVGPdtC~VVs~LLkE--e~tEAWGVEPyd--ied~d~~CKsLvrKGi--V--RvADIkfpLP-YR~kSFslViv 171 (271)
.+||-+|-.+-..-..|.+. +..+..|+|..+ ++.+..+++. -|+ | ..+|..-..+ +...+|++|++
T Consensus 261 ~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~---~g~~~v~~~~~D~~~~~~~~~~~~fD~Vl~ 336 (450)
T 2yxl_A 261 ETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKR---MGIKIVKPLVKDARKAPEIIGEEVADKVLL 336 (450)
T ss_dssp CEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHH---TTCCSEEEECSCTTCCSSSSCSSCEEEEEE
T ss_pred CEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHH---cCCCcEEEEEcChhhcchhhccCCCCEEEE
Confidence 47999988877666666552 336778877654 3444444443 344 3 3356543222 44578999885
No 221
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=28.50 E-value=44 Score=30.32 Aligned_cols=139 Identities=14% Similarity=0.072 Sum_probs=74.8
Q ss_pred HhHHHHHHhc------ccccceeeecCCchhHhHhhhcc-cccccccccc--ccccchhHHHHHHHhhceeeeeeecCCC
Q 024173 89 AIPILKKAYG------DSMHKVLHVGPDTCSVVSTLLKE-EETEAWGVEP--YDIEDADARCKSLVHKGIVRVADIKFPL 159 (271)
Q Consensus 89 AiP~LkkaYG------dsM~kVLHVGPdtC~VVs~LLkE-e~tEAWGVEP--ydied~d~~CKsLvrKGiVRvADIkfpL 159 (271)
-+|.|..-|. ..-.+||-+|=.+=-+---+..+ ..++.|+++- =-+|=+..|+..+=-.+-+++.|.--+.
T Consensus 115 RLp~lD~fY~~i~~~i~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~ 194 (281)
T 3lcv_B 115 RLPHLDEFYRELFRHLPRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDR 194 (281)
T ss_dssp HGGGHHHHHHHHGGGSCCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSC
T ss_pred HhHhHHHHHHHHHhccCCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccC
Confidence 3688888887 34567888875554333334444 4667777521 1122234444443223456777765544
Q ss_pred CCCCCCccEEEecccccccChhhhcccccchhhcccCceEEEecCCCchhhhHHhhhhcCCcccc--ccchhHHHHHHHh
Q 024173 160 PYRAKSFPLVIVSDALDYLSPKYLNKTLPDLARVASDGVLIFAGYPGQQRAKVAELSKFGRPAKM--RSSSWWIRYFVQT 237 (271)
Q Consensus 160 PYR~kSFslVivSDaLDyLspryLNkTLPeLaRvsadglViF~G~PgqqrakvaelskfgrpaK~--rsssWW~r~F~qt 237 (271)
| +-.|++|++.+++.+|...-=-.-+-=+.++.++|+|| .+|-+- =-||..-| .-+.||-+.....
T Consensus 195 p--~~~~DvaL~lkti~~Le~q~kg~g~~ll~aL~~~~vvV--Sfp~ks--------l~Grs~gm~~~Y~~~~e~~~~~~ 262 (281)
T 3lcv_B 195 L--DEPADVTLLLKTLPCLETQQRGSGWEVIDIVNSPNIVV--TFPTKS--------LGQRSKGMFQNYSQSFESQARER 262 (281)
T ss_dssp C--CSCCSEEEETTCHHHHHHHSTTHHHHHHHHSSCSEEEE--EEECC---------------CHHHHHHHHHHHHHHHH
T ss_pred C--CCCcchHHHHHHHHHhhhhhhHHHHHHHHHhCCCCEEE--eccchh--------hcCCCcchhhHHHHHHHHHHHhc
Confidence 4 66799999888777775542111122346788888776 455321 12333333 2466777766554
Q ss_pred cc
Q 024173 238 SL 239 (271)
Q Consensus 238 ~L 239 (271)
|.
T Consensus 263 g~ 264 (281)
T 3lcv_B 263 SC 264 (281)
T ss_dssp TC
T ss_pred CC
Confidence 44
No 222
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=28.48 E-value=41 Score=27.44 Aligned_cols=72 Identities=15% Similarity=0.066 Sum_probs=44.5
Q ss_pred ccceeeecCCchhHhHhhhccc-ccccccccccc--ccchhHHHHHH-----HhhceeeeeeecCCC------CCCCCCc
Q 024173 101 MHKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYD--IEDADARCKSL-----VHKGIVRVADIKFPL------PYRAKSF 166 (271)
Q Consensus 101 M~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEPyd--ied~d~~CKsL-----vrKGiVRvADIkfpL------PYR~kSF 166 (271)
-.+||-+|-.|-.+.-.|.+.. ..+..|||.-+ ++-+..|++.+ -.+=-+..+|+.-.+ ++...+|
T Consensus 37 ~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~f 116 (260)
T 2ozv_A 37 ACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPDEHF 116 (260)
T ss_dssp CEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTTCE
T ss_pred CCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCCCc
Confidence 3589999999987766666553 46788887643 23333343321 111235567886553 3567899
Q ss_pred cEEEec
Q 024173 167 PLVIVS 172 (271)
Q Consensus 167 slVivS 172 (271)
++||..
T Consensus 117 D~Vv~n 122 (260)
T 2ozv_A 117 HHVIMN 122 (260)
T ss_dssp EEEEEC
T ss_pred CEEEEC
Confidence 998874
No 223
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=28.28 E-value=32 Score=23.68 Aligned_cols=16 Identities=44% Similarity=0.627 Sum_probs=12.5
Q ss_pred CCCCchhhHHHHHHHH
Q 024173 29 RSSPLLSVGLVLVGAF 44 (271)
Q Consensus 29 rsspllsi~lv~vgai 44 (271)
++||..||+..++|.+
T Consensus 7 ~~~~~~~Ia~~vVGvl 22 (44)
T 2jwa_A 7 RASPLTSIISAVVGIL 22 (44)
T ss_dssp CCCSHHHHHHHHHHHH
T ss_pred CCCcccchHHHHHHHH
Confidence 4789988888888833
No 224
>3izc_W 60S ribosomal protein RPL22 (L22E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins; NMR {Saccharomyces cerevisiae} PDB: 3izs_W 3u5e_U 3u5i_U 4b6a_U
Probab=28.21 E-value=15 Score=29.93 Aligned_cols=23 Identities=43% Similarity=0.668 Sum_probs=19.1
Q ss_pred ccccChhhh-cccccchhhcccCc
Q 024173 175 LDYLSPKYL-NKTLPDLARVASDG 197 (271)
Q Consensus 175 LDyLspryL-NkTLPeLaRvsadg 197 (271)
|.||+.||| .+.|-|.-||=|.+
T Consensus 76 LKYLTKKyLKK~~LRDwlRVVa~~ 99 (121)
T 3izc_W 76 LKYLTKKYLKKNQLRDWIRFVSTK 99 (121)
T ss_dssp HHHHHHHHHTTSSSCCCCCCSSSC
T ss_pred HHHHHHHHhhhccccceEEEEecC
Confidence 889999999 55899999987654
No 225
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=27.68 E-value=92 Score=25.84 Aligned_cols=80 Identities=21% Similarity=0.222 Sum_probs=46.7
Q ss_pred cceeeecCCchhHhHhhhccccccccccccccccchhHHHHHHHhh--c--eeeeeee-cCCCCCCCCCccEEEeccccc
Q 024173 102 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARCKSLVHK--G--IVRVADI-KFPLPYRAKSFPLVIVSDALD 176 (271)
Q Consensus 102 ~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~CKsLvrK--G--iVRvADI-kfpLPYR~kSFslVivSDaLD 176 (271)
..||-|||.+-..-..|++....+.+|||.-+ .-+..+-++ + -+..+|+ ++++|--.. .++|++|.--
T Consensus 33 ~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~-----~~~~~~~~~~~~~v~~i~~D~~~~~~~~~~~--~~~vv~NlPy 105 (249)
T 3ftd_A 33 NTVVEVGGGTGNLTKVLLQHPLKKLYVIELDR-----EMVENLKSIGDERLEVINEDASKFPFCSLGK--ELKVVGNLPY 105 (249)
T ss_dssp CEEEEEESCHHHHHHHHTTSCCSEEEEECCCH-----HHHHHHTTSCCTTEEEECSCTTTCCGGGSCS--SEEEEEECCT
T ss_pred CEEEEEcCchHHHHHHHHHcCCCeEEEEECCH-----HHHHHHHhccCCCeEEEEcchhhCChhHccC--CcEEEEECch
Confidence 47999999999888888876557888887432 111111111 1 2444565 444443222 4578888765
Q ss_pred ccChhhhccccc
Q 024173 177 YLSPKYLNKTLP 188 (271)
Q Consensus 177 yLspryLNkTLP 188 (271)
+.+..-|-+-|-
T Consensus 106 ~i~~~il~~ll~ 117 (249)
T 3ftd_A 106 NVASLIIENTVY 117 (249)
T ss_dssp TTHHHHHHHHHH
T ss_pred hccHHHHHHHHh
Confidence 565555555443
No 226
>2pe4_A Hyaluronidase-1; hyaluronan, EGF-like domain, hydrolase; HET: NAG BMA MAN; 2.00A {Homo sapiens}
Probab=27.66 E-value=22 Score=34.00 Aligned_cols=50 Identities=24% Similarity=0.349 Sum_probs=38.6
Q ss_pred eeeeeeec--CC---CCCCCCCccEEEecccccccChhhhcccccchhhcccCceEEEec
Q 024173 149 IVRVADIK--FP---LPYRAKSFPLVIVSDALDYLSPKYLNKTLPDLARVASDGVLIFAG 203 (271)
Q Consensus 149 iVRvADIk--fp---LPYR~kSFslVivSDaLDyLspryLNkTLPeLaRvsadglViF~G 203 (271)
-+|||.+. .+ +||=---| .+.++|||-.-|-.|+-|.|-.-+|||||--.
T Consensus 250 A~Rva~~~~~~~lPV~~Y~r~~Y-----~~~~~fLS~~DL~~TigesaalGa~GiViWGs 304 (424)
T 2pe4_A 250 AFRVAVAAGDPNLPVLPYVQIFY-----DTTNHFLPLDELEHSLGESAAQGAAGVVLWVS 304 (424)
T ss_dssp HHHHHHHTTCTTCCBCCEECSBC-----BTSCCBCCHHHHHTTHHHHHHTTCSEEEEECC
T ss_pred HHHHHhccCCCCCceEEEEeeEe-----cCccccccHHHHHHHHHHHHHcCCCeEEEecc
Confidence 36888763 23 44432222 68889999999999999999999999999865
No 227
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=27.40 E-value=20 Score=31.00 Aligned_cols=96 Identities=19% Similarity=0.245 Sum_probs=53.4
Q ss_pred cccccccccccCccchH-----HHH-hHhHHHHHHhcccccceeeecCCchhHhHhhhccccccccccccccccchhHHH
Q 024173 68 EGELCLHLVHCDFSCTS-----EIQ-RAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEEETEAWGVEPYDIEDADARC 141 (271)
Q Consensus 68 eg~l~~h~~h~d~sct~-----eV~-~AiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPydied~d~~C 141 (271)
+|.=-.|+.|++++|+. .|. +|||.||+.||-. +++.|+--. |...| +..-+
T Consensus 156 ~Gn~~i~L~~RG~~~~~~y~~~~v~L~ai~~lk~~~~~p----Vi~d~sH~~--------------g~~~~----v~~~~ 213 (262)
T 1zco_A 156 QGNENVILCERGIRTFETATRFTLDISAVPVVKELSHLP----IIVDPSHPA--------------GRRSL----VIPLA 213 (262)
T ss_dssp TTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSC----EEECSSTTT--------------CSGGG----HHHHH
T ss_pred CCCCeEEEEECCCCCCCCcChhhcCHHHHHHHHhhhCCC----EEEEcCCCC--------------Cccch----HHHHH
Confidence 34334788898888863 344 8999999998632 556665431 10000 23445
Q ss_pred HHHHhhceee-eeeecCCCCCCCCCccEEEecccccccChhhhcccccchhhc
Q 024173 142 KSLVHKGIVR-VADIKFPLPYRAKSFPLVIVSDALDYLSPKYLNKTLPDLARV 193 (271)
Q Consensus 142 KsLvrKGiVR-vADIkfpLPYR~kSFslVivSDaLDyLspryLNkTLPeLaRv 193 (271)
++-+..|..= |-..+ +-|-|+.+ |.--=|+|.-|.+-+-++.++
T Consensus 214 ~aAva~Ga~Gl~iE~H-~~~d~al~-------D~~~sl~p~~~~~l~~~i~~~ 258 (262)
T 1zco_A 214 KAAYAIGADGIMVEVH-PEPEKALS-------DSQQQLTFDDFLQLLKELEAL 258 (262)
T ss_dssp HHHHHTTCSEEEEEBC-SSGGGCSS-------CTTTCBCHHHHHHHHHHHHHT
T ss_pred HHHHHcCCCEEEEEec-CCccccCC-------hhhcCCCHHHHHHHHHHHHHH
Confidence 6666666421 22333 34445543 665566776666555555444
No 228
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=26.97 E-value=56 Score=25.71 Aligned_cols=71 Identities=11% Similarity=0.027 Sum_probs=41.8
Q ss_pred cceeeecCCchhHhHhhhccc-ccccccccccc--ccchhHHHHHHHhhc--eeeeeeecC----CCCCC-CCCccEEEe
Q 024173 102 HKVLHVGPDTCSVVSTLLKEE-ETEAWGVEPYD--IEDADARCKSLVHKG--IVRVADIKF----PLPYR-AKSFPLVIV 171 (271)
Q Consensus 102 ~kVLHVGPdtC~VVs~LLkEe-~tEAWGVEPyd--ied~d~~CKsLvrKG--iVRvADIkf----pLPYR-~kSFslViv 171 (271)
.+||-+|-.|..+...|++.- ..+..|||..+ ++-+..+++..--.+ -+..+|+.- ++|-. ..+|++||.
T Consensus 67 ~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i~~ 146 (254)
T 2h00_A 67 RRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFCMC 146 (254)
T ss_dssp CEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEEEE
T ss_pred CEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccEEEE
Confidence 479999999988777776553 46788887542 344444444321111 234456431 34432 268999875
Q ss_pred c
Q 024173 172 S 172 (271)
Q Consensus 172 S 172 (271)
.
T Consensus 147 n 147 (254)
T 2h00_A 147 N 147 (254)
T ss_dssp C
T ss_pred C
Confidence 4
No 229
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=26.85 E-value=48 Score=28.92 Aligned_cols=137 Identities=15% Similarity=0.216 Sum_probs=75.5
Q ss_pred HHHhHhHHHHHHhc--ccccceeeecCCc---hhHhHhhhcc---ccccccccccccc------c---------------
Q 024173 85 EIQRAIPILKKAYG--DSMHKVLHVGPDT---CSVVSTLLKE---EETEAWGVEPYDI------E--------------- 135 (271)
Q Consensus 85 eV~~AiP~LkkaYG--dsM~kVLHVGPdt---C~VVs~LLkE---e~tEAWGVEPydi------e--------------- 135 (271)
+-.++|-.|-+.-. +--.+||=+|=-+ +...+..|++ .+.+.|+++.++- +
T Consensus 89 ~r~~~L~~l~~~v~~~~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~ 168 (282)
T 2wk1_A 89 KRLENIRQCVEDVIGNNVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNS 168 (282)
T ss_dssp HHHHHHHHHHHHHHHTTCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHH
T ss_pred HHHHHHHHHHHHHHhcCCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccc
Confidence 33444433333333 2345799998754 4456666764 4677888886641 0
Q ss_pred ----chhHHHHHHHhhce------eeeeeecCCCCCC-CCCccEEEeccccccc-ChhhhcccccchhhcccCceEEEec
Q 024173 136 ----DADARCKSLVHKGI------VRVADIKFPLPYR-AKSFPLVIVSDALDYL-SPKYLNKTLPDLARVASDGVLIFAG 203 (271)
Q Consensus 136 ----d~d~~CKsLvrKGi------VRvADIkfpLPYR-~kSFslVivSDaLDyL-spryLNkTLPeLaRvsadglViF~G 203 (271)
..+..-+.+-+.|+ ++..|..=-||-- ..+|++|.+ |+=-|- ...||+.-+| |++..|+|||=-
T Consensus 169 ~~~~~~~~ar~n~~~~gl~~~~I~li~Gda~etL~~~~~~~~d~vfI-DaD~y~~~~~~Le~~~p---~L~pGGiIv~DD 244 (282)
T 2wk1_A 169 VLAVSEEEVRRNFRNYDLLDEQVRFLPGWFKDTLPTAPIDTLAVLRM-DGDLYESTWDTLTNLYP---KVSVGGYVIVDD 244 (282)
T ss_dssp HHCCCHHHHHHHHHHTTCCSTTEEEEESCHHHHSTTCCCCCEEEEEE-CCCSHHHHHHHHHHHGG---GEEEEEEEEESS
T ss_pred cchhHHHHHHHHHHHcCCCcCceEEEEeCHHHHHhhCCCCCEEEEEE-cCCccccHHHHHHHHHh---hcCCCEEEEEcC
Confidence 01112234444454 3334443334422 357888776 653344 3578888777 678899999966
Q ss_pred C---CCchhhhHHhhhhcCCccccc
Q 024173 204 Y---PGQQRAKVAELSKFGRPAKMR 225 (271)
Q Consensus 204 ~---PgqqrakvaelskfgrpaK~r 225 (271)
+ ||+.+|--.=+.+.|..+.+.
T Consensus 245 ~~~~~G~~~Av~Ef~~~~~i~~~i~ 269 (282)
T 2wk1_A 245 YMMCPPCKDAVDEYRAKFDIADELI 269 (282)
T ss_dssp CTTCHHHHHHHHHHHHHTTCCSCCE
T ss_pred CCCCHHHHHHHHHHHHhcCCceEEE
Confidence 3 666544333344455444443
No 230
>1sw5_A Osmoprotection protein (PROX); binding-protein, compatible solutes, cation-PI interactions, classical hydrogen bonds, protein binding; 1.80A {Archaeoglobus fulgidus} SCOP: c.94.1.1 PDB: 1sw4_A 1sw1_A 1sw2_A 3mam_A*
Probab=26.21 E-value=1.2e+02 Score=24.82 Aligned_cols=61 Identities=20% Similarity=0.277 Sum_probs=36.5
Q ss_pred hHhHHHHHHhcccccceeeecCCchhHhHhhhcccccccc-ccccccccchhHHHHHHHhhceeeeeeecCCCC
Q 024173 88 RAIPILKKAYGDSMHKVLHVGPDTCSVVSTLLKEEETEAW-GVEPYDIEDADARCKSLVHKGIVRVADIKFPLP 160 (271)
Q Consensus 88 ~AiP~LkkaYGdsM~kVLHVGPdtC~VVs~LLkEe~tEAW-GVEPydied~d~~CKsLvrKGiVRvADIkfpLP 160 (271)
..+|-+.++||=+...+....|. .+. .-|+.++..+| +-+|+-. +.+.+++.+.|-+--.|
T Consensus 151 ~g~~~~~~~yGl~~~~~~~~~~~--~~~-~Al~~g~vd~~~~~~p~~~---------~~~~~l~~L~d~~~~~~ 212 (275)
T 1sw5_A 151 DGLPQIKKVYGFEFKEVKQMEPT--LMY-EAIKNKQVDVIPAYTTDSR---------VDLFNLKILEDDKGALP 212 (275)
T ss_dssp TSHHHHHHHHTCCCSEEEECCGG--GHH-HHHHTTSCSEEEEETTCHH---------HHHTTEEECBCTTCCSC
T ss_pred chHHHHHHhcCCCcccccCCCHH--HHH-HHHHcCCCeEEEEeCCCcc---------hhcCCeEEccCCcccCC
Confidence 35777899999887777665543 344 44555555553 3366533 23457777777554333
No 231
>3l5o_A Uncharacterized protein from DUF364 family; RARE metals, siderophores, adenosyl binding site; 2.01A {Desulfitobacterium hafniense}
Probab=24.85 E-value=25 Score=31.11 Aligned_cols=46 Identities=26% Similarity=0.369 Sum_probs=31.2
Q ss_pred hhhhcccccchhhcccCc-eEEEecCCCchhhhHHhhhhcCCccccccchhH
Q 024173 180 PKYLNKTLPDLARVASDG-VLIFAGYPGQQRAKVAELSKFGRPAKMRSSSWW 230 (271)
Q Consensus 180 pryLNkTLPeLaRvsadg-lViF~G~PgqqrakvaelskfgrpaK~rsssWW 230 (271)
.--+|+|||+|-+.+.++ .||+.| |+-+=.- +|-++| +.+=..+++
T Consensus 195 stlvN~Tl~~lL~~~~~a~~vvl~G-PStp~~P--~lf~~G--v~~laG~~V 241 (270)
T 3l5o_A 195 ASVVDKTLPRLLELSRNARRITLVG-PGTPLAP--VLFEHG--LQELSGFMV 241 (270)
T ss_dssp HHHHHTCHHHHHHHTTTSSEEEEES-TTCCCCG--GGGGTT--CSEEEEEEE
T ss_pred ehhhcCCHHHHHhhCCCCCEEEEEC-CCchhhH--HHHhcC--cCEEEEEEE
Confidence 356999999999998766 788999 6554333 466665 444444433
No 232
>1jr3_A DNA polymerase III subunit gamma; processivity, processivity clamp, clamp loader, AAA+ ATPase, transferase; HET: DNA; 2.70A {Escherichia coli} SCOP: a.80.1.1 c.37.1.20 PDB: 1xxh_B* 3glh_B* 3glf_B* 3gli_B* 3glg_B* 1xxi_B*
Probab=24.33 E-value=58 Score=26.65 Aligned_cols=84 Identities=12% Similarity=0.092 Sum_probs=50.5
Q ss_pred EEEecccccccChhhhcccccchhhcccCceEEEecC-CCchhhhHH---hhhhcCCccccccchhHHHHHHHhccccch
Q 024173 168 LVIVSDALDYLSPKYLNKTLPDLARVASDGVLIFAGY-PGQQRAKVA---ELSKFGRPAKMRSSSWWIRYFVQTSLEENE 243 (271)
Q Consensus 168 lVivSDaLDyLspryLNkTLPeLaRvsadglViF~G~-Pgqqrakva---elskfgrpaK~rsssWW~r~F~qt~LeEnE 243 (271)
.||+=|=.|.|++.-+|.-+.-|.....+.++|++.. |..-...+. ..-.|..|-.---..|..+++.+.|+.-++
T Consensus 121 ~vliiDe~~~l~~~~~~~Ll~~le~~~~~~~~Il~~~~~~~l~~~l~sr~~~i~~~~l~~~~~~~~l~~~~~~~~~~~~~ 200 (373)
T 1jr3_A 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHEP 200 (373)
T ss_dssp EEEEEECGGGSCHHHHHHHHHHHHSCCSSEEEEEEESCGGGSCHHHHTTSEEEECCCCCHHHHHHHHHHHHHHHTCCBCH
T ss_pred EEEEEECcchhcHHHHHHHHHHHhcCCCceEEEEEeCChHhCcHHHHhheeEeeCCCCCHHHHHHHHHHHHHHcCCCCCH
Confidence 4566677899999888877776777777888888873 332211111 111233333333356777777777877666
Q ss_pred HHHHHHHH
Q 024173 244 PAVKKFEQ 251 (271)
Q Consensus 244 ~a~KkFeq 251 (271)
++.+.+-+
T Consensus 201 ~a~~~l~~ 208 (373)
T 1jr3_A 201 RALQLLAR 208 (373)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66655443
No 233
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=23.81 E-value=41 Score=29.25 Aligned_cols=107 Identities=14% Similarity=0.101 Sum_probs=61.5
Q ss_pred ccceeeecCCchhHhHhhhccccccccccccc--cccchhHHHHHHH--h-hceeeeeeecCCCCC---CCCCccEEEec
Q 024173 101 MHKVLHVGPDTCSVVSTLLKEEETEAWGVEPY--DIEDADARCKSLV--H-KGIVRVADIKFPLPY---RAKSFPLVIVS 172 (271)
Q Consensus 101 M~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPy--died~d~~CKsLv--r-KGiVRvADIkfpLPY---R~kSFslVivS 172 (271)
-.+||-+|-.|...--.+.+....+..|||.. -++.+..|++..- . +=-+..+|+.-.++. +..+|++||+
T Consensus 221 ~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii~- 299 (396)
T 3c0k_A 221 NKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIVM- 299 (396)
T ss_dssp TCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE-
T ss_pred CCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEEE-
Confidence 35899999999988777777656688998864 3566666665321 1 112445676433332 2468998875
Q ss_pred ccccc-cCh-------hhhcccccch-hhcccCceEEEecCCCch
Q 024173 173 DALDY-LSP-------KYLNKTLPDL-ARVASDGVLIFAGYPGQQ 208 (271)
Q Consensus 173 DaLDy-Lsp-------ryLNkTLPeL-aRvsadglViF~G~Pgqq 208 (271)
|.=-+ .++ +-+.+.+.+. ..+..+|+++++-.|+..
T Consensus 300 dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 344 (396)
T 3c0k_A 300 DPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLM 344 (396)
T ss_dssp CCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCTTC
T ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcC
Confidence 31100 000 1111122222 335678899988877643
No 234
>1o6a_A Putative flagellar motor switch protein FLIN; C- terminal PR fragment, structural genomics, joint center for structural JCSG; 1.85A {Thermotoga maritima} SCOP: b.139.1.1 PDB: 1yab_A
Probab=23.16 E-value=12 Score=28.00 Aligned_cols=28 Identities=21% Similarity=0.164 Sum_probs=25.2
Q ss_pred hcccccchhhcccCceEEEecCCCchhh
Q 024173 183 LNKTLPDLARVASDGVLIFAGYPGQQRA 210 (271)
Q Consensus 183 LNkTLPeLaRvsadglViF~G~Pgqqra 210 (271)
||+..+|-+.+-.+|..+|.|.+|+..-
T Consensus 48 Ld~~~~~~v~v~v~g~~i~~G~~g~~~~ 75 (96)
T 1o6a_A 48 LDKLTGEPVDILVNGKLIARGEVVVIDE 75 (96)
T ss_dssp EEEETTCCEEEEETTEEEEEEEEEEETT
T ss_pred eCCCCCCcEEEEECCEEEEEEEEEEECC
Confidence 6788889999999999999999999854
No 235
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=22.66 E-value=34 Score=29.63 Aligned_cols=26 Identities=4% Similarity=0.195 Sum_probs=11.4
Q ss_pred ccChhhhcccccchhhcccCceEEEe
Q 024173 177 YLSPKYLNKTLPDLARVASDGVLIFA 202 (271)
Q Consensus 177 yLspryLNkTLPeLaRvsadglViF~ 202 (271)
+..|.+.-..+-|+++--..++|+|+
T Consensus 78 ~vp~~~~~~~v~ea~~~Gi~~vVi~t 103 (297)
T 2yv2_A 78 FVPAPFAPDAVYEAVDAGIRLVVVIT 103 (297)
T ss_dssp CCCGGGHHHHHHHHHHTTCSEEEECC
T ss_pred ecCHHHHHHHHHHHHHCCCCEEEEEC
Confidence 34444444444444444444444443
No 236
>3idw_A Actin cytoskeleton-regulatory complex protein SLA; clathrin adaptor, endocytosis, SAM domain, yeast, actin-BIND membrane, endosome; 1.85A {Saccharomyces cerevisiae}
Probab=21.76 E-value=33 Score=25.85 Aligned_cols=23 Identities=13% Similarity=0.596 Sum_probs=16.8
Q ss_pred HHHHHHHhccccchHH--HHHHHHH
Q 024173 230 WIRYFVQTSLEENEPA--VKKFEQA 252 (271)
Q Consensus 230 W~r~F~qt~LeEnE~a--~KkFeqa 252 (271)
|.+||+.+|+..+-++ ...|+.-
T Consensus 5 Wf~FFl~aGv~~~~c~rYA~~F~~~ 29 (72)
T 3idw_A 5 WFEFFLNCGVDVSNCQRYTINFDRE 29 (72)
T ss_dssp HHHHHHHTTCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCChHHHHHHHHHHHHc
Confidence 9999999999987554 3445443
No 237
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=21.48 E-value=38 Score=29.77 Aligned_cols=106 Identities=14% Similarity=0.120 Sum_probs=61.3
Q ss_pred cceeeecCCchhHhHhhhccccccccccccc--cccchhHHHHHHHh---hceeeeeeecCCCCC---CCCCccEEEecc
Q 024173 102 HKVLHVGPDTCSVVSTLLKEEETEAWGVEPY--DIEDADARCKSLVH---KGIVRVADIKFPLPY---RAKSFPLVIVSD 173 (271)
Q Consensus 102 ~kVLHVGPdtC~VVs~LLkEe~tEAWGVEPy--died~d~~CKsLvr---KGiVRvADIkfpLPY---R~kSFslVivSD 173 (271)
.+||-+|=.|..+--.+.+..-.+..|||.. -++.+..|.+..-- +--+..+|+.-.||. +..+|++||+ |
T Consensus 214 ~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii~-D 292 (385)
T 2b78_A 214 KTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIIII-D 292 (385)
T ss_dssp CEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEEE-C
T ss_pred CeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEEE-C
Confidence 5899999999988777777655678888854 35666666653311 112455676433442 2458998875 3
Q ss_pred cccc-cChhhhcccccc---h-----hhcccCceEEEecCCCch
Q 024173 174 ALDY-LSPKYLNKTLPD---L-----ARVASDGVLIFAGYPGQQ 208 (271)
Q Consensus 174 aLDy-LspryLNkTLPe---L-----aRvsadglViF~G~Pgqq 208 (271)
-=-+ .+...+...+.+ | ..+..+|+++++..|.+.
T Consensus 293 PP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~ 336 (385)
T 2b78_A 293 PPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAANM 336 (385)
T ss_dssp CCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTTS
T ss_pred CCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcC
Confidence 1000 000111111222 1 456788999998877654
No 238
>2h1q_A Hypothetical protein; ZP_00559375.1, structural genomics, PSI-2, protein structure initiative; 2.01A {Desulfitobacterium hafniense dcb-2} PDB: 3l5o_A
Probab=21.18 E-value=33 Score=30.19 Aligned_cols=28 Identities=21% Similarity=0.357 Sum_probs=22.6
Q ss_pred hhhcccccchhhcccCc-eEEEecCCCch
Q 024173 181 KYLNKTLPDLARVASDG-VLIFAGYPGQQ 208 (271)
Q Consensus 181 ryLNkTLPeLaRvsadg-lViF~G~Pgqq 208 (271)
--+|+|+|+|-..+.++ .||+.|--.+-
T Consensus 196 TlvN~Ti~~lL~~~~~a~~vvl~GPS~p~ 224 (270)
T 2h1q_A 196 SVVDKTLPRLLELSRNARRITLVGPGTPL 224 (270)
T ss_dssp HHHHTCHHHHHHHTTTSSEEEEESTTCCC
T ss_pred eeecCCHHHHHHhCccCCeEEEEecChhh
Confidence 46899999999888877 99999954443
No 239
>3syl_A Protein CBBX; photosynthesis, rubisco activase, AAA+ protein, calvin cycle chaperone; 3.00A {Rhodobacter sphaeroides} PDB: 3syk_A 3zuh_A*
Probab=20.85 E-value=93 Score=24.96 Aligned_cols=85 Identities=15% Similarity=0.121 Sum_probs=49.4
Q ss_pred EEeccccccc---------ChhhhcccccchhhcccCceEEEecCCCchhhh----HHhhhhcCCcccc------ccchh
Q 024173 169 VIVSDALDYL---------SPKYLNKTLPDLARVASDGVLIFAGYPGQQRAK----VAELSKFGRPAKM------RSSSW 229 (271)
Q Consensus 169 VivSDaLDyL---------spryLNkTLPeLaRvsadglViF~G~Pgqqrak----vaelskfgrpaK~------rsssW 229 (271)
||+=|=+|.| ++.-+|.-+.-|..-..+.+||+++++.....- -+=.+.|+..+.+ --...
T Consensus 133 vl~iDEid~l~~~~~~~~~~~~~~~~Ll~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~R~~~~i~~~~~~~~~~~~i 212 (309)
T 3syl_A 133 VLFIDEAYYLYRPDNERDYGQEAIEILLQVMENNRDDLVVILAGYADRMENFFQSNPGFRSRIAHHIEFPDYSDEELFEI 212 (309)
T ss_dssp EEEEETGGGSCCCC---CCTHHHHHHHHHHHHHCTTTCEEEEEECHHHHHHHHHHSTTHHHHEEEEEEECCCCHHHHHHH
T ss_pred EEEEEChhhhccCCCcccccHHHHHHHHHHHhcCCCCEEEEEeCChHHHHHHHhhCHHHHHhCCeEEEcCCcCHHHHHHH
Confidence 6666777777 666667666666666677899999987532110 0111223222222 12345
Q ss_pred HHHHHHHhccccchHHHHHHHHHH
Q 024173 230 WIRYFVQTSLEENEPAVKKFEQAA 253 (271)
Q Consensus 230 W~r~F~qt~LeEnE~a~KkFeqa~ 253 (271)
|.++..+.++.-++++.+...+..
T Consensus 213 l~~~l~~~~~~~~~~~~~~l~~~~ 236 (309)
T 3syl_A 213 AGHMLDDQNYQMTPEAETALRAYI 236 (309)
T ss_dssp HHHHHHHTTCEECHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCHHHHHHHHHHH
Confidence 666667777777777776665543
Done!