STRING 9.05 
  AT3G59500 protein (Arabidopsis thaliana) - STRING network view
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
AT3G59500
integral membrane HRF1 family protein; integral membrane HRF1 family protein; LOCATED IN- integral to membrane, endoplasmic reticulum; EXPRESSED IN- guard cell, callus; CONTAINS InterPro DOMAIN/s- Hrf1 (InterPro-IPR005578); BEST Arabidopsis thaliana protein match is- integral membrane HRF1 family protein (TAIR-AT1G30890.2); Has 337 Blast hits to 337 proteins in 127 species- Archae - 0; Bacteria - 0; Metazoa - 169; Fungi - 90; Plants - 38; Viruses - 0; Other Eukaryotes - 40 (source- NCBI BLink). (269 aa)
(Arabidopsis thaliana)
Predicted Functional Partners:
AT3G29270
ubiquitin-protein ligase; ubiquitin-protein ligase; FUNCTIONS IN- ubiquitin-protein ligase acti [...] (263 aa)
      0.928
BTI3
BTI3 (VIRB2-INTERACTING PROTEIN 3); VIRB2-INTERACTING PROTEIN 3 (BTI3); INVOLVED IN- biological [...] (257 aa)
      0.927
AT1G30890
integral membrane HRF1 family protein; integral membrane HRF1 family protein; FUNCTIONS IN- mol [...] (269 aa)
      0.899
AT3G11320
organic anion transmembrane transporter; organic anion transmembrane transporter; FUNCTIONS IN- [...] (308 aa)
       0.879
AT1G32090
early-responsive to dehydration protein-related / ERD protein-related; early-responsive to dehy [...] (806 aa)
       0.871
BTI2
BTI2 (VIRB2-INTERACTING PROTEIN 2); VIRB2-INTERACTING PROTEIN 2 (BTI2); INVOLVED IN- biological [...] (271 aa)
       0.690
UXS4
UXS4 (UDP-XYLOSE SYNTHASE 4); UDP-glucuronate decarboxylase/ catalytic; encodes a protein simil [...] (443 aa)
       0.675
XXT5
XXT5 (XYLOGLUCAN XYLOSYLTRANSFERASE 5); transferase/ transferase, transferring glycosyl groups [...] (457 aa)
       0.534
AT5G16890
exostosin family protein; exostosin family protein; FUNCTIONS IN- catalytic activity; INVOLVED [...] (511 aa)
       0.508
AT3G24040
glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein; glycosyltrans [...] (417 aa)
       0.508
 
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Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
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