Query 024182
Match_columns 271
No_of_seqs 126 out of 150
Neff 5.8
Searched_HMMs 29240
Date Mon Mar 25 03:47:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024182.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024182hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4ev1_A Anabena TIC22; TIC22 fo 100.0 7.7E-55 2.6E-59 394.0 22.9 195 70-270 2-224 (252)
2 4e6z_A Apicoplast TIC22, putat 100.0 1.5E-48 5E-53 358.1 18.2 190 68-269 63-271 (279)
3 4ev1_A Anabena TIC22; TIC22 fo 99.4 7.8E-13 2.7E-17 119.5 7.2 117 52-172 100-225 (252)
4 4e6z_A Apicoplast TIC22, putat 99.0 1.5E-09 5.2E-14 99.4 9.1 110 52-171 162-272 (279)
5 3or5_A Thiol:disulfide interch 80.9 11 0.00036 29.0 9.1 130 80-219 12-153 (165)
6 2lrn_A Thiol:disulfide interch 80.5 13 0.00046 28.3 9.5 126 81-219 8-143 (152)
7 3fw2_A Thiol-disulfide oxidore 75.2 7.1 0.00024 29.9 6.4 124 81-218 10-149 (150)
8 2yzh_A Probable thiol peroxida 73.8 11 0.00037 29.7 7.4 78 80-159 25-110 (171)
9 4eo3_A Bacterioferritin comigr 73.5 3.4 0.00012 37.5 4.7 74 80-161 2-86 (322)
10 1xvw_A Hypothetical protein RV 66.7 7.7 0.00026 29.9 4.9 78 81-159 14-100 (160)
11 1psq_A Probable thiol peroxida 61.9 11 0.00037 29.6 5.0 77 81-159 21-105 (163)
12 4hde_A SCO1/SENC family lipopr 61.5 8.7 0.0003 30.8 4.4 61 81-142 11-77 (170)
13 3p7x_A Probable thiol peroxida 60.8 12 0.00039 29.5 4.9 78 80-160 24-109 (166)
14 3fkf_A Thiol-disulfide oxidore 60.2 49 0.0017 24.4 8.4 123 81-217 10-146 (148)
15 1q98_A Thiol peroxidase, TPX; 58.8 23 0.0008 27.7 6.5 74 81-160 22-107 (165)
16 3zrd_A Thiol peroxidase; oxido 58.1 7.3 0.00025 32.3 3.4 84 80-169 56-153 (200)
17 3drn_A Peroxiredoxin, bacterio 56.2 21 0.00072 27.7 5.7 77 81-160 7-94 (161)
18 3erw_A Sporulation thiol-disul 53.4 60 0.002 23.7 7.7 60 80-143 13-77 (145)
19 3ha9_A Uncharacterized thiored 51.6 57 0.002 24.9 7.6 57 81-142 16-77 (165)
20 2z0r_A Putative uncharacterize 49.9 20 0.00069 27.7 4.3 51 82-140 7-57 (103)
21 3me7_A Putative uncharacterize 49.7 92 0.0031 24.4 10.6 133 81-219 6-164 (170)
22 3lwa_A Secreted thiol-disulfid 48.0 96 0.0033 24.1 9.1 126 80-218 35-182 (183)
23 3ia1_A THIO-disulfide isomeras 44.9 55 0.0019 24.6 6.4 123 81-219 10-146 (154)
24 2wfc_A Peroxiredoxin 5, PRDX5; 42.8 24 0.00082 28.2 4.1 76 81-160 8-100 (167)
25 2jsy_A Probable thiol peroxida 40.6 21 0.00071 27.7 3.3 78 80-159 22-107 (167)
26 3gkn_A Bacterioferritin comigr 37.9 9.5 0.00032 29.6 0.9 79 81-160 12-100 (163)
27 4g2e_A Peroxiredoxin; redox pr 36.6 10 0.00036 29.8 0.9 76 81-161 9-96 (157)
28 3mng_A Peroxiredoxin-5, mitoch 34.4 31 0.0011 28.0 3.5 84 81-168 20-121 (173)
29 3keb_A Probable thiol peroxida 34.3 28 0.00096 30.0 3.4 127 80-219 26-178 (224)
30 1xvq_A Thiol peroxidase; thior 33.4 63 0.0021 25.4 5.2 128 80-219 22-167 (175)
31 3raz_A Thioredoxin-related pro 32.9 1.5E+02 0.0052 22.0 8.1 132 82-221 3-144 (151)
32 3kcm_A Thioredoxin family prot 32.0 96 0.0033 23.0 5.9 126 80-220 6-146 (154)
33 2ggt_A SCO1 protein homolog, m 31.4 28 0.00094 26.6 2.6 130 82-218 3-162 (164)
34 1xcc_A 1-Cys peroxiredoxin; un 31.3 1.4E+02 0.0047 24.9 7.3 130 81-217 8-166 (220)
35 3fk8_A Disulphide isomerase; A 31.2 22 0.00075 26.4 1.9 49 74-124 79-132 (133)
36 3gl3_A Putative thiol:disulfid 31.0 89 0.0031 23.2 5.5 123 81-219 8-144 (152)
37 2b7k_A SCO1 protein; metalloch 30.7 66 0.0023 26.0 5.0 76 82-159 21-112 (200)
38 1lu4_A Soluble secreted antige 29.5 76 0.0026 22.9 4.8 118 81-215 3-134 (136)
39 3ixr_A Bacterioferritin comigr 28.1 14 0.00049 29.6 0.4 75 82-160 31-116 (179)
40 3eur_A Uncharacterized protein 27.2 92 0.0031 23.0 5.0 118 81-213 10-141 (142)
41 2rli_A SCO2 protein homolog, m 26.9 53 0.0018 25.1 3.6 129 83-219 7-166 (171)
42 2lja_A Putative thiol-disulfid 25.3 74 0.0025 23.6 4.1 124 81-220 8-146 (152)
43 3uma_A Hypothetical peroxiredo 25.1 29 0.00099 28.4 1.8 78 80-161 30-126 (184)
44 1xzo_A BSSCO, hypothetical pro 24.7 57 0.0019 25.0 3.4 60 81-142 12-78 (174)
45 3kij_A Probable glutathione pe 24.4 1.2E+02 0.0041 23.7 5.4 59 80-142 16-80 (180)
46 3hdc_A Thioredoxin family prot 23.8 1.6E+02 0.0055 22.2 5.9 78 80-160 19-103 (158)
47 2f9s_A Thiol-disulfide oxidore 22.4 1.5E+02 0.0052 21.9 5.4 124 81-219 5-140 (151)
48 1zzo_A RV1677; thioredoxin fol 22.3 1.5E+02 0.0051 21.0 5.2 119 81-216 4-134 (136)
49 1jfu_A Thiol:disulfide interch 21.8 1.6E+02 0.0054 22.8 5.6 60 80-143 38-103 (186)
50 3ewl_A Uncharacterized conserv 21.6 1.6E+02 0.0055 21.4 5.4 121 81-215 6-139 (142)
51 2lqo_A Putative glutaredoxin R 21.4 1.4E+02 0.0048 21.6 4.8 57 150-217 27-84 (92)
52 1zye_A Thioredoxin-dependent p 21.1 1.2E+02 0.0042 24.9 5.0 127 81-218 32-186 (220)
53 2v1m_A Glutathione peroxidase; 21.0 1.6E+02 0.0054 22.2 5.3 58 81-142 10-73 (169)
54 4evm_A Thioredoxin family prot 20.6 1.8E+02 0.0062 20.4 5.4 54 82-139 2-60 (138)
No 1
>4ev1_A Anabena TIC22; TIC22 fold, chaperon, protein transport, TIC22-like family, thylakoids, chaperone; HET: NHE; 1.95A {Anabaena SP}
Probab=100.00 E-value=7.7e-55 Score=393.99 Aligned_cols=195 Identities=22% Similarity=0.402 Sum_probs=182.7
Q ss_pred CChHHHHhhcCCccEEEEEcCCCCeEEEeCCCC------CeeEEEEEecHHHHHHHHHHHHH---hcc---cccCCceEE
Q 024182 70 LSSDFVSKTLAGTAVYTVSNSSNEFVLISDPNG------AKSIGLLCFRQEDAEAFLAQVRL---RRK---ELRSAAKVV 137 (271)
Q Consensus 70 L~~~~i~ekL~~VPVF~Vtn~~g~pvli~~~~g------~~~v~~~F~s~~DA~a~L~~lk~---~~P---~~~~~~kV~ 137 (271)
||++||+++|++||||+|||++|+||+++++++ +++|++||||++||++||+++|+ +|| ++++++||+
T Consensus 2 L~e~eV~ekL~~VPVF~Itn~~G~Pll~~~~~~~~~~~~~~~V~~~F~s~~dA~~~L~~lk~~~~~np~~~~~~~~~kV~ 81 (252)
T 4ev1_A 2 LSEQQIKEKLDSVPIYLVTNEKGLPLSRPLPNAPNGQKAGGSITGAYMSRQEAQAFINELRNAKNKDPKMQEIVKSLQVT 81 (252)
T ss_dssp CCHHHHHHHHTTSEEEEEECTTCCBCEEECCCCTTSCCSCSEEEEEESCHHHHHHHHHHHHHCSSCCHHHHHHHTTCEEE
T ss_pred CCHHHHHHHhcCCcEEEEECCCCCeEEEecCCccccccCCCeEEEEEecHHHHHHHHHHHHhccccCchhhhhccCceEE
Confidence 899999999999999999999999999998872 57899999999999999999999 999 999999999
Q ss_pred EEehhhHHhh------hcCCeeEEEecCHHHHHHHHHhhhhccC--CCCCCceEEecc------ceeEeeC--CeEEeee
Q 024182 138 PITLDQVYML------KVEGIAFRFLPDPAQIRNALELKAADVR--TGFDGVPVFQSE------LLVVKKK--NKRYCPV 201 (271)
Q Consensus 138 ~vsL~~vy~l------k~~~i~f~fvP~~~qv~~A~~L~~~~~~--~~f~GVPVF~~~------~Lti~~~--~~~~~Pv 201 (271)
+|+||+||++ +.+++.|+|||+++||++|+.|++.+|+ +.|+|||||+.. +||++++ |++|+|+
T Consensus 82 ~vsL~~vyql~~~~~~k~~~l~F~fvP~~~qV~~A~~Ll~~~Gq~~~~f~gVPvF~~~~~~~~~~Lti~~~~~~~~~iPl 161 (252)
T 4ev1_A 82 AVPLGVIYQQLQQTKKDPNRLLFAFKPVDQEIKGAMDLLRQSGQQVNQFKSVPMFAVRFAPDQGYVPIKVGTGNEQVVPL 161 (252)
T ss_dssp EEEHHHHHHHHHHTTTCTTCEEEEEECCHHHHHHHHHHHHTTTCCCSCCCSCEEEEEESSTTSCBCCEEETTTTEEEEEE
T ss_pred EeeHHHHHHHHHhhccCCcCceEEEcCCHHHHHHHHHHHHHcCCCcccCCCccEEEEecCCCCccEEEEeCCCCCEEEee
Confidence 9999999999 4578999999999999999999998876 568899999965 7999998 9999999
Q ss_pred eecHHHHHHHHHHHHHhcCCCCCcceEEEEeHHHHHHHHhhcCCCCCceeEEEeCCcccHHHHHHHHhc
Q 024182 202 YFQKEDIEKELSKVSRASRGAGVSQHIMVGSLEDVLKKMETSEKNSGWEDLIFIPPGKSHSQHIQEVAK 270 (271)
Q Consensus 202 FFskeDl~~~l~~~kk~~p~~~~~~~I~V~~Le~vi~~m~~~~~~~~~~~~vfIPp~~s~~~~i~~~~~ 270 (271)
||+||||+++|+++++++|+ ++|+|++|++||++|++++ ++.|.+++||||++++ +|||++++
T Consensus 162 FF~KedL~~~l~~~kkq~P~----~~I~V~~Le~vI~~m~~~~-d~~~~~ivfiPs~es~-e~i~~~~~ 224 (252)
T 4ev1_A 162 FLSKQDAQGLLGQVKPKHPK----ADIQVLDIDGVLQTLQDKN-DTWLNQVVLVPSPESR-EYIRTLPK 224 (252)
T ss_dssp ESSHHHHHHHHHHHTTTCTT----CEEEEEEHHHHHHHHHHCC-CGGGGGEEEECCHHHH-HHHHTSCC
T ss_pred EecHHHHHHHHHHHHHhCCC----CcEEEeeHHHHHHHHhcCc-ccccceEEEECCHHHH-HHHHhccc
Confidence 99999999999999999988 9999999999999999854 6689999999999999 99999864
No 2
>4e6z_A Apicoplast TIC22, putative; TIC complex, import protein, transport protein; 2.15A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=1.5e-48 Score=358.06 Aligned_cols=190 Identities=19% Similarity=0.302 Sum_probs=168.4
Q ss_pred ccCChHHHHhhcCCccEEEEEcCCCCeEEEeCCCCCeeEEEEEecHHHHHHHHHHHHH-hcccccCCceEEEEehhhHHh
Q 024182 68 ATLSSDFVSKTLAGTAVYTVSNSSNEFVLISDPNGAKSIGLLCFRQEDAEAFLAQVRL-RRKELRSAAKVVPITLDQVYM 146 (271)
Q Consensus 68 ~aL~~~~i~ekL~~VPVF~Vtn~~g~pvli~~~~g~~~v~~~F~s~~DA~a~L~~lk~-~~P~~~~~~kV~~vsL~~vy~ 146 (271)
.++++++|+|||++||||+|||++|+|++++++ +++|++||||++||+++|+++++ ++|++++++||++++||+||+
T Consensus 63 ~~~~e~~I~EKL~~VPVF~Itn~~G~Pll~~~~--~~~V~~fF~s~~DA~a~L~el~k~~~~~~~~~~kV~pvsL~kvy~ 140 (279)
T 4e6z_A 63 KRYDERPIEEKLEVIPVFLITNYNSSPYIFQEN--EKQVCYMFLCPYDAENMLNDMIKYNGMKYNGNIKIHNITMKKAYE 140 (279)
T ss_dssp -----CCHHHHSTTSEEEEEECTTCCBCCEEET--TEEEEEEESSHHHHHHHHHHHHHHCHHHHTTSCEEEEEEHHHHHH
T ss_pred hcccHHhHHHHhcCCCEEEEEcCCCCEEEecCC--CCeEEEEECCHHHHHHHHHHHHhccCcccccCceEEEecHHHHHH
Confidence 489999999999999999999999999999764 46899999999999999999755 558999999999999999999
Q ss_pred h------------------hcCCeeEEEecCHHHHHHHHHhhhhccCCCCCCceEEeccceeEeeCCeEEeeeeecHHHH
Q 024182 147 L------------------KVEGIAFRFLPDPAQIRNALELKAADVRTGFDGVPVFQSELLVVKKKNKRYCPVYFQKEDI 208 (271)
Q Consensus 147 l------------------k~~~i~f~fvP~~~qv~~A~~L~~~~~~~~f~GVPVF~~~~Lti~~~~~~~~PvFFskeDl 208 (271)
+ +.+++.|+|+|+++||++|+.+++.+|++ ++|||||+.++|++++++++++|+||+||||
T Consensus 141 l~~~~~~~~~~~i~~~~~~k~~~l~fr~vP~~~qV~~A~~ll~~~gq~-~~gVPVF~~~~Lti~k~~k~iiPlFF~keDL 219 (279)
T 4e6z_A 141 LMKEFLQLEKMEVNKEDSKKKQNIYWKLISSKRQLQNALYYLSFTKKS-ELMYPVFYAENLYIQKDGSNIIPLFFDLEDL 219 (279)
T ss_dssp HHHHHHHHHHC----------CCEEEEEECCHHHHHHHHTTSCTTTST-TCCSEEEEETTCCEECSSSEEEEEESSHHHH
T ss_pred HHhhcccccchhcccccccCCcceeeEecCCHHHHHHHHHHHHhcCCc-CCCccEEEEeeEEEeeCCeEEEeeEecHHHH
Confidence 7 23679999999999999999999887765 8899999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCCcceEEEEeHHHHHHHHhhcCCCCCceeEEEeCCcccHHHHHHHHh
Q 024182 209 EKELSKVSRASRGAGVSQHIMVGSLEDVLKKMETSEKNSGWEDLIFIPPGKSHSQHIQEVA 269 (271)
Q Consensus 209 ~~~l~~~kk~~p~~~~~~~I~V~~Le~vi~~m~~~~~~~~~~~~vfIPp~~s~~~~i~~~~ 269 (271)
+++|+++++++|+ ..+++|+|++|+++|..| +|.+++||||++++ +||++++
T Consensus 220 ~~~l~q~~~~~p~-~~~~~I~V~~L~~ll~~~-------d~~kivFIPs~eSl-efi~~l~ 271 (279)
T 4e6z_A 220 KEAIEEQKNKALS-KVDYKIKVLNMVDLIFTE-------DHKKFGFVPSTQSV-KYLDKLN 271 (279)
T ss_dssp HHHHHHHHTTCSS-CCCCCEEEEEHHHHHTCS-------CCTTEEEECCHHHH-HHHHHHH
T ss_pred HHHHHHhhhcCCC-CCCCceEEEhHHHHHhhC-------CcCeEEEECCHHHH-HHHHHHh
Confidence 9999999999987 457999999999999654 35689999999999 9999985
No 3
>4ev1_A Anabena TIC22; TIC22 fold, chaperon, protein transport, TIC22-like family, thylakoids, chaperone; HET: NHE; 1.95A {Anabaena SP}
Probab=99.36 E-value=7.8e-13 Score=119.48 Aligned_cols=117 Identities=18% Similarity=0.256 Sum_probs=96.1
Q ss_pred CCCCeeeecCcch-hhhccCChH--HHHhhcCCccEEEEEcCCC-CeEEEeCCCCCeeEEEEEecHHHHHHHHHHHHHhc
Q 024182 52 SVPPFAFLSQPKQ-ALAATLSSD--FVSKTLAGTAVYTVSNSSN-EFVLISDPNGAKSIGLLCFRQEDAEAFLAQVRLRR 127 (271)
Q Consensus 52 ~~~~~a~v~~~~~-~~a~aL~~~--~i~ekL~~VPVF~Vtn~~g-~pvli~~~~g~~~v~~~F~s~~DA~a~L~~lk~~~ 127 (271)
.+..|+++|.+++ ..|+.|..+ +-++.+.|||||.+..+.+ +++++...++++.+.++||+++|++++|+++++++
T Consensus 100 ~~l~F~fvP~~~qV~~A~~Ll~~~Gq~~~~f~gVPvF~~~~~~~~~~Lti~~~~~~~~~iPlFF~KedL~~~l~~~kkq~ 179 (252)
T 4ev1_A 100 NRLLFAFKPVDQEIKGAMDLLRQSGQQVNQFKSVPMFAVRFAPDQGYVPIKVGTGNEQVVPLFLSKQDAQGLLGQVKPKH 179 (252)
T ss_dssp TCEEEEEECCHHHHHHHHHHHHTTTCCCSCCCSCEEEEEESSTTSCBCCEEETTTTEEEEEEESSHHHHHHHHHHHTTTC
T ss_pred cCceEEEcCCHHHHHHHHHHHHHcCCCcccCCCccEEEEecCCCCccEEEEeCCCCCEEEeeEecHHHHHHHHHHHHHhC
Confidence 4789999999987 777877665 3456788999999997554 67777533337889999999999999999999999
Q ss_pred ccccCCceEEEEehhhHHhh-h-cCC---eeEEEecCHHHHHHHHHhhhh
Q 024182 128 KELRSAAKVVPITLDQVYML-K-VEG---IAFRFLPDPAQIRNALELKAA 172 (271)
Q Consensus 128 P~~~~~~kV~~vsL~~vy~l-k-~~~---i~f~fvP~~~qv~~A~~L~~~ 172 (271)
|+ .+|.+++|+.+++. . .++ -.++|||+.+.+++++++...
T Consensus 180 P~----~~I~V~~Le~vI~~m~~~~d~~~~~ivfiPs~es~e~i~~~~~~ 225 (252)
T 4ev1_A 180 PK----ADIQVLDIDGVLQTLQDKNDTWLNQVVLVPSPESREYIRTLPKP 225 (252)
T ss_dssp TT----CEEEEEEHHHHHHHHHHCCCGGGGGEEEECCHHHHHHHHTSCCC
T ss_pred CC----CcEEEeeHHHHHHHHhcCcccccceEEEECCHHHHHHHHhcccc
Confidence 97 99999999999986 2 222 478899999999999998654
No 4
>4e6z_A Apicoplast TIC22, putative; TIC complex, import protein, transport protein; 2.15A {Plasmodium falciparum 3D7}
Probab=98.96 E-value=1.5e-09 Score=99.39 Aligned_cols=110 Identities=16% Similarity=0.165 Sum_probs=88.8
Q ss_pred CCCCeeeecCcch-hhhccCChHHHHhhcCCccEEEEEcCCCCeEEEeCCCCCeeEEEEEecHHHHHHHHHHHHHhcccc
Q 024182 52 SVPPFAFLSQPKQ-ALAATLSSDFVSKTLAGTAVYTVSNSSNEFVLISDPNGAKSIGLLCFRQEDAEAFLAQVRLRRKEL 130 (271)
Q Consensus 52 ~~~~~a~v~~~~~-~~a~aL~~~~i~ekL~~VPVF~Vtn~~g~pvli~~~~g~~~v~~~F~s~~DA~a~L~~lk~~~P~~ 130 (271)
....|.++|..++ ..|..+..+.- +.-.|||||.+.. +++. .+++.++++||+++|+++.+++.++++|.
T Consensus 162 ~~l~fr~vP~~~qV~~A~~ll~~~g-q~~~gVPVF~~~~-----Lti~--k~~k~iiPlFF~keDL~~~l~q~~~~~p~- 232 (279)
T 4e6z_A 162 QNIYWKLISSKRQLQNALYYLSFTK-KSELMYPVFYAEN-----LYIQ--KDGSNIIPLFFDLEDLKEAIEEQKNKALS- 232 (279)
T ss_dssp CCEEEEEECCHHHHHHHHTTSCTTT-STTCCSEEEEETT-----CCEE--CSSSEEEEEESSHHHHHHHHHHHHTTCSS-
T ss_pred cceeeEecCCHHHHHHHHHHHHhcC-CcCCCccEEEEee-----EEEe--eCCeEEEeeEecHHHHHHHHHHhhhcCCC-
Confidence 4678999999977 67777766643 3467999999853 5554 35677999999999999999999999987
Q ss_pred cCCceEEEEehhhHHhhhcCCeeEEEecCHHHHHHHHHhhh
Q 024182 131 RSAAKVVPITLDQVYMLKVEGIAFRFLPDPAQIRNALELKA 171 (271)
Q Consensus 131 ~~~~kV~~vsL~~vy~lk~~~i~f~fvP~~~qv~~A~~L~~ 171 (271)
....+|.+++|..+..-.. .-.|.|||+.+.++.++++..
T Consensus 233 ~~~~~I~V~~L~~ll~~~d-~~kivFIPs~eSlefi~~l~~ 272 (279)
T 4e6z_A 233 KVDYKIKVLNMVDLIFTED-HKKFGFVPSTQSVKYLDKLNI 272 (279)
T ss_dssp CCCCCEEEEEHHHHHTCSC-CTTEEEECCHHHHHHHHHHHH
T ss_pred CCCCceEEEhHHHHHhhCC-cCeEEEECCHHHHHHHHHHhc
Confidence 5568899999998886433 336889999999999999854
No 5
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=80.88 E-value=11 Score=29.00 Aligned_cols=130 Identities=14% Similarity=0.137 Sum_probs=72.0
Q ss_pred CCccEEEEEcCCCCeEEEeCCCCCeeEEEEEecH-----HHHHHHHHHHHHhcccccCCceEEEEehhhHHh----h-hc
Q 024182 80 AGTAVYTVSNSSNEFVLISDPNGAKSIGLLCFRQ-----EDAEAFLAQVRLRRKELRSAAKVVPITLDQVYM----L-KV 149 (271)
Q Consensus 80 ~~VPVF~Vtn~~g~pvli~~~~g~~~v~~~F~s~-----~DA~a~L~~lk~~~P~~~~~~kV~~vsL~~vy~----l-k~ 149 (271)
...|-|.++|.+|..+-...-.| +.+...|+.. ......+.++....++ .++.|..|+.+.--+ . +.
T Consensus 12 ~~~p~~~l~~~~g~~~~l~~~~g-k~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~--~~v~~v~v~~d~~~~~~~~~~~~ 88 (165)
T 3or5_A 12 TPAPSFSGVTVDGKPFSSASLKG-KAYIVNFFATWCPPCRSEIPDMVQVQKTWAS--RGFTFVGIAVNEQLPNVKNYMKT 88 (165)
T ss_dssp CBCCCCEEECTTSCEEEGGGGTT-CEEEEEEECTTSHHHHHHHHHHHHHHHHHTT--TTEEEEEEECSCCHHHHHHHHHH
T ss_pred CCCCCceeeCCCCCEechhHcCC-CEEEEEEEcCcCHHHHHHHHHHHHHHHHhcc--CCeEEEEEECCCCHHHHHHHHHH
Confidence 35788999999999888766555 4455455531 1222334444444332 358888888774221 1 33
Q ss_pred CCeeEEEecCHHHHHHHHHhhhhccCCCCCCceEEeccceeEeeCCeEEe--eeeecHHHHHHHHHHHHHhc
Q 024182 150 EGIAFRFLPDPAQIRNALELKAADVRTGFDGVPVFQSELLVVKKKNKRYC--PVYFQKEDIEKELSKVSRAS 219 (271)
Q Consensus 150 ~~i~f~fvP~~~qv~~A~~L~~~~~~~~f~GVPVF~~~~Lti~~~~~~~~--PvFFskeDl~~~l~~~kk~~ 219 (271)
.++.|.++-+..++..+..... .....|+|-++ .+.++|+.+- .=+.+.+++.+.++++.++.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~P~~~----lid~~G~i~~~~~g~~~~~~l~~~l~~~l~~~ 153 (165)
T 3or5_A 89 QGIIYPVMMATPELIRAFNGYI---DGGITGIPTSF----VIDASGNVSGVIVGPRSKADFDRIVKMALGAK 153 (165)
T ss_dssp HTCCSCEEECCHHHHHHHHTTS---TTCSCSSSEEE----EECTTSBEEEEECSCCCHHHHHHHHHHHHC--
T ss_pred cCCCCceEecCHHHHHHHhhhh---ccCCCCCCeEE----EECCCCcEEEEEcCCCCHHHHHHHHHHHHhhh
Confidence 4566666666654433332211 11356788654 2233333221 11357899999998887644
No 6
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=80.48 E-value=13 Score=28.33 Aligned_cols=126 Identities=11% Similarity=0.078 Sum_probs=72.2
Q ss_pred CccEEEEEcCCCCeEEEeCCCCCeeEEEEEecH-----HHHHHHHHHHHHhcccccCCceEEEEehhhHHh-h----hcC
Q 024182 81 GTAVYTVSNSSNEFVLISDPNGAKSIGLLCFRQ-----EDAEAFLAQVRLRRKELRSAAKVVPITLDQVYM-L----KVE 150 (271)
Q Consensus 81 ~VPVF~Vtn~~g~pvli~~~~g~~~v~~~F~s~-----~DA~a~L~~lk~~~P~~~~~~kV~~vsL~~vy~-l----k~~ 150 (271)
.+|-|.++|.+|..+..+.-.| +.+.+.|... ......|.++.+..++ .+++|..|+.+.--+ + +..
T Consensus 8 ~~p~f~l~~~~G~~~~l~~~~g-k~vll~F~a~~C~~C~~~~~~l~~l~~~~~~--~~~~vv~v~~d~~~~~~~~~~~~~ 84 (152)
T 2lrn_A 8 VAPAITGIDLKGNSVSLNDFKG-KYVLVDFWFAGCSWCRKETPYLLKTYNAFKD--KGFTIYGVSTDRREEDWKKAIEED 84 (152)
T ss_dssp ECCCCEEECSSSCEEESGGGTT-SEEEEEEECTTCTTHHHHHHHHHHHHHHHTT--TTEEEEEEECCSCHHHHHHHHHHH
T ss_pred cCCCceeEcCCCCEEeHHHcCC-CEEEEEEECCCChhHHHHHHHHHHHHHHhcc--CCeEEEEEEccCCHHHHHHHHHHh
Confidence 3688999999999888866555 4455455421 1222334444443332 358899998874211 1 234
Q ss_pred CeeEEEecCHHHHHHHHHhhhhccCCCCCCceEEeccceeEeeCCeEEeeeeecHHHHHHHHHHHHHhc
Q 024182 151 GIAFRFLPDPAQIRNALELKAADVRTGFDGVPVFQSELLVVKKKNKRYCPVYFQKEDIEKELSKVSRAS 219 (271)
Q Consensus 151 ~i~f~fvP~~~qv~~A~~L~~~~~~~~f~GVPVF~~~~Lti~~~~~~~~PvFFskeDl~~~l~~~kk~~ 219 (271)
++.|.++.+..... ..+.+.- +..|+|-++ .+.++|+ ++-.+.+.+++++.++++.++.
T Consensus 85 ~~~~~~~~d~~~~~--~~~~~~~---~v~~~P~~~----lid~~G~-i~~~~~~~~~l~~~l~~l~~~~ 143 (152)
T 2lrn_A 85 KSYWNQVLLQKDDV--KDVLESY---CIVGFPHII----LVDPEGK-IVAKELRGDDLYNTVEKFVNGA 143 (152)
T ss_dssp TCCSEEEEECHHHH--HHHHHHT---TCCSSCEEE----EECTTSE-EEEECCCTTHHHHHHHHHHTSS
T ss_pred CCCCeEEecccchh--HHHHHHh---CCCcCCeEE----EECCCCe-EEEeeCCHHHHHHHHHHHHhhc
Confidence 56677777653221 1122111 134788642 3344444 4445678899999999987754
No 7
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=75.17 E-value=7.1 Score=29.88 Aligned_cols=124 Identities=14% Similarity=0.182 Sum_probs=70.0
Q ss_pred CccEEEEEcCCCCeEEEe--CCCCCeeEEEEEe--------cHHHHHHHHHHHHHhc-ccccCCceEEEEehhhHH---h
Q 024182 81 GTAVYTVSNSSNEFVLIS--DPNGAKSIGLLCF--------RQEDAEAFLAQVRLRR-KELRSAAKVVPITLDQVY---M 146 (271)
Q Consensus 81 ~VPVF~Vtn~~g~pvli~--~~~g~~~v~~~F~--------s~~DA~a~L~~lk~~~-P~~~~~~kV~~vsL~~vy---~ 146 (271)
..|-|.++|.+|..+..+ .-.| +.+.+.|. ++.... .|.++.++. . ..++.|..|+.+.-- +
T Consensus 10 ~~p~f~l~~~~g~~~~l~~~~~~g-k~vll~F~a~~C~~v~C~~~~~-~l~~l~~~~~~--~~~~~~v~v~~d~~~~~~~ 85 (150)
T 3fw2_A 10 YAPFFSLPNAKGEKITRSSDAFKQ-KSLLINFWASWNDSISQKQSNS-ELREIYKKYKK--NKYIGMLGISLDVDKQQWK 85 (150)
T ss_dssp BCCCCCEEBTTCCEECTTSTTTTT-SEEEEEEECTTCCCHHHHHHHH-HHHHHHHHHTT--CSSEEEEEEECCSCHHHHH
T ss_pred cCCccEeECCCCCEEecchhhhCC-CEEEEEEEeCCCCchHHHHHHH-HHHHHHHHhcc--CCCeEEEEEEcCCCHHHHH
Confidence 578899999999988776 5454 44444443 333332 333444332 1 245889999888432 1
Q ss_pred h--hcCCeeEEEecCHHHHHHHHHhhhhccCCCCCCceEEeccceeEeeCCeEEeeeeecHHHHHHHHHHHHHh
Q 024182 147 L--KVEGIAFRFLPDPAQIRNALELKAADVRTGFDGVPVFQSELLVVKKKNKRYCPVYFQKEDIEKELSKVSRA 218 (271)
Q Consensus 147 l--k~~~i~f~fvP~~~qv~~A~~L~~~~~~~~f~GVPVF~~~~Lti~~~~~~~~PvFFskeDl~~~l~~~kk~ 218 (271)
- +..++.|.++.+...... .+.+. =+..++|-++ .+.++|+ ++-.+.+.+++++.++++.++
T Consensus 86 ~~~~~~~~~~~~~~d~~~~~~--~~~~~---~~v~~~P~~~----lid~~G~-i~~~~~~~~~l~~~l~~ll~~ 149 (150)
T 3fw2_A 86 DAIKRDTLDWEQVCDFGGLNS--EVAKQ---YSIYKIPANI----LLSSDGK-ILAKNLRGEELKKKIENIVEE 149 (150)
T ss_dssp HHHHHTTCCSEEECCSCGGGC--HHHHH---TTCCSSSEEE----EECTTSB-EEEESCCHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCceEEEcCcccch--HHHHH---cCCCccCeEE----EECCCCE-EEEccCCHHHHHHHHHHHHhc
Confidence 1 345677777777521110 11111 0124777543 3444444 444556999999999887653
No 8
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=73.78 E-value=11 Score=29.75 Aligned_cols=78 Identities=8% Similarity=0.040 Sum_probs=52.9
Q ss_pred CCccEEEEEcCCCCeEEEeCCCCCeeEEEEEec---HHHHHHHHHHHHHhcccccCCceEEEEehhhHHhh----hcCCe
Q 024182 80 AGTAVYTVSNSSNEFVLISDPNGAKSIGLLCFR---QEDAEAFLAQVRLRRKELRSAAKVVPITLDQVYML----KVEGI 152 (271)
Q Consensus 80 ~~VPVF~Vtn~~g~pvli~~~~g~~~v~~~F~s---~~DA~a~L~~lk~~~P~~~~~~kV~~vsL~~vy~l----k~~~i 152 (271)
+.+|-|.++|.+|+.+..+.-.|. .+.++|+. -.-..+.+.++++...++ .+++|..|+.|..-.+ +..++
T Consensus 25 ~~~P~f~l~~~~G~~~~l~~~~gk-~vvl~f~~~~~C~~C~~~~~~l~~~~~~~-~~v~vv~Is~d~~~~~~~~~~~~~~ 102 (171)
T 2yzh_A 25 DRAPEAVVVTKDLQEKIVGGAKDV-VQVIITVPSLDTPVCETETKKFNEIMAGM-EGVDVTVVSMDLPFAQKRFCESFNI 102 (171)
T ss_dssp SBCCCEEEEETTSCEEEESSCCSS-EEEEEECSCTTSHHHHHHHHHHHHHTTTC-TTEEEEEEESSCHHHHHHHHHHTTC
T ss_pred CcCCceEEECCCCCEeeHHHhCCC-eEEEEEECCCCCCchHHHHHHHHHHHHHc-CCceEEEEeCCCHHHHHHHHHHcCC
Confidence 357889999999999998766654 44445541 123344455666555566 7899999999865444 23566
Q ss_pred -eEEEecC
Q 024182 153 -AFRFLPD 159 (271)
Q Consensus 153 -~f~fvP~ 159 (271)
.|.++.|
T Consensus 103 ~~~~~l~D 110 (171)
T 2yzh_A 103 QNVTVASD 110 (171)
T ss_dssp CSSEEEEC
T ss_pred CCeEEeec
Confidence 7888877
No 9
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=73.54 E-value=3.4 Score=37.51 Aligned_cols=74 Identities=24% Similarity=0.274 Sum_probs=54.3
Q ss_pred CCccEEEEEcCCCCeEEEeCCCCCeeEEEEEe-------cHHHHHHHHHHHHHhcccccCCceEEEEehhhHHhhh----
Q 024182 80 AGTAVYTVSNSSNEFVLISDPNGAKSIGLLCF-------RQEDAEAFLAQVRLRRKELRSAAKVVPITLDQVYMLK---- 148 (271)
Q Consensus 80 ~~VPVF~Vtn~~g~pvli~~~~g~~~v~~~F~-------s~~DA~a~L~~lk~~~P~~~~~~kV~~vsL~~vy~lk---- 148 (271)
+-+|=|++.|.+|+.+-.++-.|. .|.++|. +..++..|- +.+ ..++.|..||.|....++
T Consensus 2 ak~p~F~l~~~~G~~~~Lsd~~Gk-~vvl~F~p~~~tp~C~~e~~~~~----~~~---~~~~~v~gis~D~~~~~~~f~~ 73 (322)
T 4eo3_A 2 ARVKHFELLTDEGKTFTHVDLYGK-YTILFFFPKAGTSGSTREAVEFS----REN---FEKAQVVGISRDSVEALKRFKE 73 (322)
T ss_dssp CBCCCCEEEETTSCEEEGGGTTTS-EEEEEECSSTTSHHHHHHHHHHH----HSC---CTTEEEEEEESCCHHHHHHHHH
T ss_pred CCCCCcEEECCCcCEEeHHHhCCC-eEEEEEECCCCCCCCHHHHHHHH----HHh---hCCCEEEEEeCCCHHHHHHHHH
Confidence 568999999999999988877764 4555554 556665552 222 247899999999887763
Q ss_pred cCCeeEEEecCHH
Q 024182 149 VEGIAFRFLPDPA 161 (271)
Q Consensus 149 ~~~i~f~fvP~~~ 161 (271)
..++.|.++.|+.
T Consensus 74 ~~~l~fp~l~D~~ 86 (322)
T 4eo3_A 74 KNDLKVTLLSDPE 86 (322)
T ss_dssp HHTCCSEEEECTT
T ss_pred hhCCceEEEEcCc
Confidence 4688999998864
No 10
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=66.72 E-value=7.7 Score=29.94 Aligned_cols=78 Identities=21% Similarity=0.314 Sum_probs=50.3
Q ss_pred CccEEEEEcCCCCeEEEeCCCCCeeEEEEEe----cHHHHHHHHHHHHHhccccc-CCceEEEEehhhHHhh----hcCC
Q 024182 81 GTAVYTVSNSSNEFVLISDPNGAKSIGLLCF----RQEDAEAFLAQVRLRRKELR-SAAKVVPITLDQVYML----KVEG 151 (271)
Q Consensus 81 ~VPVF~Vtn~~g~pvli~~~~g~~~v~~~F~----s~~DA~a~L~~lk~~~P~~~-~~~kV~~vsL~~vy~l----k~~~ 151 (271)
.+|-|.++|.+|..+..+.-.|.+.+.+.|+ +. .-.+.+..+++...++. .+++|..|+.|..-.+ +..+
T Consensus 14 ~~p~f~l~~~~G~~~~l~~~~gk~~vvl~F~~a~~C~-~C~~~~~~l~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~ 92 (160)
T 1xvw_A 14 TAPDFTLRDQNQQLVTLRGYRGAKNVLLVFFPLAFTG-ICQGELDQLRDHLPEFENDDSAALAISVGPPPTHKIWATQSG 92 (160)
T ss_dssp BCCCCEEECTTSCEEEGGGGTTTCEEEEEECSCTTSS-HHHHHHHHHHHTGGGTSSSSEEEEEEESCCHHHHHHHHHHHT
T ss_pred CCCCeEeEcCCCCEEeHHHhcCCCCEEEEEECCCCCC-chHHHHHHHHHHHHHHHHCCcEEEEEeCCCHHHHHHHHHhcC
Confidence 4788999999999988876566534555665 22 33444555555444443 4689999998865443 2346
Q ss_pred eeEEEecC
Q 024182 152 IAFRFLPD 159 (271)
Q Consensus 152 i~f~fvP~ 159 (271)
+.|.++-|
T Consensus 93 ~~~~~~~d 100 (160)
T 1xvw_A 93 FTFPLLSD 100 (160)
T ss_dssp CCSCEEEC
T ss_pred CCceEEec
Confidence 67777777
No 11
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=61.91 E-value=11 Score=29.58 Aligned_cols=77 Identities=13% Similarity=0.144 Sum_probs=51.2
Q ss_pred CccEEEEEcCCCCeEEEeCCCCCeeEEEEEec---HHHHHHHHHHHHHhcccccCCceEEEEehhhHHhh----hcCCe-
Q 024182 81 GTAVYTVSNSSNEFVLISDPNGAKSIGLLCFR---QEDAEAFLAQVRLRRKELRSAAKVVPITLDQVYML----KVEGI- 152 (271)
Q Consensus 81 ~VPVF~Vtn~~g~pvli~~~~g~~~v~~~F~s---~~DA~a~L~~lk~~~P~~~~~~kV~~vsL~~vy~l----k~~~i- 152 (271)
..|-|.++|.+|..+..+.-.|. .+.++|+. -.--.+.+..+++...++ .+++|..|+.|..-.+ +..++
T Consensus 21 ~~P~f~l~~~~G~~v~l~~~~gk-~vvl~F~~~~~c~~C~~~~~~l~~~~~~~-~~v~vv~is~d~~~~~~~~~~~~~~~ 98 (163)
T 1psq_A 21 KALDFSLTTTDLSKKSLADFDGK-KKVLSVVPSIDTGICSTQTRRFNEELAGL-DNTVVLTVSMDLPFAQKRWCGAEGLD 98 (163)
T ss_dssp BCCCCEEECTTSCEEEGGGGTTS-EEEEEECSCTTSHHHHHHHHHHHHHTTTC-TTEEEEEEESSCHHHHHHHHHHHTCT
T ss_pred CCCCEEEEcCCCcEeeHHHhCCC-EEEEEEECCCCCCccHHHHHHHHHHHHHc-CCcEEEEEECCCHHHHHHHHHhcCCC
Confidence 57889999999999888765654 44444442 122334455555555556 7899999999865544 23567
Q ss_pred eEEEecC
Q 024182 153 AFRFLPD 159 (271)
Q Consensus 153 ~f~fvP~ 159 (271)
.|.++.|
T Consensus 99 ~~~~l~D 105 (163)
T 1psq_A 99 NAIMLSD 105 (163)
T ss_dssp TSEEEEC
T ss_pred CcEEecC
Confidence 7888877
No 12
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=61.51 E-value=8.7 Score=30.84 Aligned_cols=61 Identities=15% Similarity=0.187 Sum_probs=36.9
Q ss_pred CccEEEEEcCCCCeEEEeCCCCCeeEEEEEe------cHHHHHHHHHHHHHhcccccCCceEEEEehh
Q 024182 81 GTAVYTVSNSSNEFVLISDPNGAKSIGLLCF------RQEDAEAFLAQVRLRRKELRSAAKVVPITLD 142 (271)
Q Consensus 81 ~VPVF~Vtn~~g~pvli~~~~g~~~v~~~F~------s~~DA~a~L~~lk~~~P~~~~~~kV~~vsL~ 142 (271)
.+|=|+++|.+|..+..++-+|...+..|++ ++..... +.++.+.-.+.+.++++..||+|
T Consensus 11 ~~PdF~L~d~~G~~v~l~d~~Gk~vll~F~~t~Cp~~Cp~~~~~-l~~l~~~~~~~~~~v~~v~isvD 77 (170)
T 4hde_A 11 DLETFQFTNQDGKPFGTKDLKGKVWVADFMFTNCQTVCPPMTAN-MAKLQKMAKEEKLDVQFVSFSVD 77 (170)
T ss_dssp CCCCCEEECTTSCEEEHHHHTTSCEEEEEECTTCSSSHHHHHHH-HHHHHHHHHHTTCCCEEEEEESC
T ss_pred cCCCcEEECCCCCEEeHHHhCCCEEEEEEECCCCCCcccHHHHH-HHHHHHhhhcccccceeEeeecC
Confidence 5788999999999998876666443333332 3333332 23333322222456888888886
No 13
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=60.82 E-value=12 Score=29.52 Aligned_cols=78 Identities=15% Similarity=0.131 Sum_probs=50.9
Q ss_pred CCccEEEEEcCCCCeEEEeCCCCCeeEEEEEe-c--HHHHHHHHHHHHHhcccccCCceEEEEehhhHHhh----hcCCe
Q 024182 80 AGTAVYTVSNSSNEFVLISDPNGAKSIGLLCF-R--QEDAEAFLAQVRLRRKELRSAAKVVPITLDQVYML----KVEGI 152 (271)
Q Consensus 80 ~~VPVF~Vtn~~g~pvli~~~~g~~~v~~~F~-s--~~DA~a~L~~lk~~~P~~~~~~kV~~vsL~~vy~l----k~~~i 152 (271)
+..|=|.++|.+|..+..++-.| +.+.++|+ + -.--...+..+.+...+ .++.|..|+.|....+ +..++
T Consensus 24 ~~aP~f~l~~~~G~~~~l~~~~G-k~vvl~f~~~~~c~~C~~~~~~l~~~~~~--~~~~vv~is~d~~~~~~~~~~~~~~ 100 (166)
T 3p7x_A 24 DFAPDFTVLDNDLNQVTLADYAG-KKKLISVVPSIDTGVCDQQTRKFNSDASK--EEGIVLTISADLPFAQKRWCASAGL 100 (166)
T ss_dssp SBCCCCEEECTTSCEEEGGGGTT-SCEEEEECSCTTSHHHHHHHHHHHHHSCT--TTSEEEEEESSCHHHHHHHHHHHTC
T ss_pred CCCCCeEEEcCCCCEEeHHHhCC-CcEEEEEECCCCCCccHHHHHHHHHHhhc--CCCEEEEEECCCHHHHHHHHHHcCC
Confidence 35788999999999988876565 44544554 1 12222333444443333 6799999999876655 23567
Q ss_pred -eEEEecCH
Q 024182 153 -AFRFLPDP 160 (271)
Q Consensus 153 -~f~fvP~~ 160 (271)
.|.++-|.
T Consensus 101 ~~~~~l~D~ 109 (166)
T 3p7x_A 101 DNVITLSDH 109 (166)
T ss_dssp SSCEEEECT
T ss_pred CceEEccCC
Confidence 78888887
No 14
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=60.19 E-value=49 Score=24.38 Aligned_cols=123 Identities=15% Similarity=0.152 Sum_probs=68.2
Q ss_pred CccEEEEEcCCCCeEEEe--CCCCCeeEEEEEe------cHHHHHHHHHHHHHhc-ccccCCceEEEEehhhHH----hh
Q 024182 81 GTAVYTVSNSSNEFVLIS--DPNGAKSIGLLCF------RQEDAEAFLAQVRLRR-KELRSAAKVVPITLDQVY----ML 147 (271)
Q Consensus 81 ~VPVF~Vtn~~g~pvli~--~~~g~~~v~~~F~------s~~DA~a~L~~lk~~~-P~~~~~~kV~~vsL~~vy----~l 147 (271)
.+|-|.+++.+|..+..+ .-.| +.+.+.|+ ++... ..+.++.... .+ .+++|..|+.+.-- +.
T Consensus 10 ~~p~~~l~~~~g~~~~l~~~~~~g-k~vll~F~~~~C~~C~~~~-~~l~~l~~~~~~~--~~~~~v~v~~d~~~~~~~~~ 85 (148)
T 3fkf_A 10 SAPYFSLPNEKGEKLSRSAERFRN-RYLLLNFWASWCDPQPEAN-AELKRLNKEYKKN--KNFAMLGISLDIDREAWETA 85 (148)
T ss_dssp BCCCCCEEBTTSCEECTTSTTTTT-SEEEEEEECGGGCCCHHHH-HHHHHHHHHTTTC--TTEEEEEEECCSCHHHHHHH
T ss_pred cCCCeEeeCCCCCEEeccccccCC-cEEEEEEECCCCHHHHHHh-HHHHHHHHHhcCC--CCeEEEEEECCCCHHHHHHH
Confidence 578899999999988776 4444 44544444 23333 3445555443 22 35889888887422 11
Q ss_pred -hcCCeeEEEecCHHHHHHHHHhhhhccCCCCCCceEEeccceeEeeCCeEEeeeeecHHHHHHHHHHHHH
Q 024182 148 -KVEGIAFRFLPDPAQIRNALELKAADVRTGFDGVPVFQSELLVVKKKNKRYCPVYFQKEDIEKELSKVSR 217 (271)
Q Consensus 148 -k~~~i~f~fvP~~~qv~~A~~L~~~~~~~~f~GVPVF~~~~Lti~~~~~~~~PvFFskeDl~~~l~~~kk 217 (271)
+..++.|.++-+...-.. .+... =+..|+|-++ .+.++|+ ++-.+.+.+++.+.++++.+
T Consensus 86 ~~~~~~~~~~~~d~~~~~~--~~~~~---~~v~~~P~~~----lid~~G~-i~~~~~~~~~l~~~l~~ll~ 146 (148)
T 3fkf_A 86 IKKDTLSWDQVCDFTGLSS--ETAKQ---YAILTLPTNI----LLSPTGK-ILARDIQGEALTGKLKELLK 146 (148)
T ss_dssp HHHTTCCSEEECCSCGGGC--HHHHH---TTCCSSSEEE----EECTTSB-EEEESCCHHHHHHHHHHHC-
T ss_pred HHHcCCCceEEEccCCcch--HHHHh---cCCCCcCEEE----EECCCCe-EEEecCCHHHHHHHHHHHHc
Confidence 335666666666421100 11111 1134788643 3334444 33344499999999988754
No 15
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=58.77 E-value=23 Score=27.70 Aligned_cols=74 Identities=18% Similarity=0.130 Sum_probs=49.2
Q ss_pred CccEEEEEcCCCCeEEEeCCCCCeeEEEEEe-------cHHHHHHHHHHHHHhcccccCCceEEEEehhhHHhh----hc
Q 024182 81 GTAVYTVSNSSNEFVLISDPNGAKSIGLLCF-------RQEDAEAFLAQVRLRRKELRSAAKVVPITLDQVYML----KV 149 (271)
Q Consensus 81 ~VPVF~Vtn~~g~pvli~~~~g~~~v~~~F~-------s~~DA~a~L~~lk~~~P~~~~~~kV~~vsL~~vy~l----k~ 149 (271)
..|-|+++|.+|..+..+.-.|.. +.++|+ +..+... |+++.+ ++ .+++|..|+.|....+ +.
T Consensus 22 ~~P~f~l~~~~G~~v~l~~~~gk~-vvl~f~~~~~c~~C~~e~~~-l~~~~~---~~-~~v~vv~Is~d~~~~~~~~~~~ 95 (165)
T 1q98_A 22 IVENFILVGNDLADVALNDFASKR-KVLNIFPSIDTGVCATSVRK-FNQQAA---KL-SNTIVLCISADLPFAQARFCGA 95 (165)
T ss_dssp BCCCCEEECTTSCEEEGGGGTTSE-EEEEECSCSCSSCCCHHHHH-HHHHHH---HS-TTEEEEEEESSCHHHHTTCTTT
T ss_pred CCCCeEEECCCCCEEehHHhCCCe-EEEEEECCCCCCccHHHHHH-HHHHHH---Hc-CCCEEEEEeCCCHHHHHHHHHH
Confidence 478899999999998887656643 444443 2344433 333333 33 5799999999876655 23
Q ss_pred CCe-eEEEecCH
Q 024182 150 EGI-AFRFLPDP 160 (271)
Q Consensus 150 ~~i-~f~fvP~~ 160 (271)
.++ .|.++-|.
T Consensus 96 ~~~~~~~~l~D~ 107 (165)
T 1q98_A 96 EGIENAKTVSTF 107 (165)
T ss_dssp TTCTTEEEEECT
T ss_pred cCCCceEEeecc
Confidence 567 69988885
No 16
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=58.13 E-value=7.3 Score=32.30 Aligned_cols=84 Identities=21% Similarity=0.192 Sum_probs=55.6
Q ss_pred CCccEEEEEcCCCCeEEEeCCCCCeeEEEEEe-------cHHHHHHHHHHHHHhcccccCCceEEEEehhhHHhh----h
Q 024182 80 AGTAVYTVSNSSNEFVLISDPNGAKSIGLLCF-------RQEDAEAFLAQVRLRRKELRSAAKVVPITLDQVYML----K 148 (271)
Q Consensus 80 ~~VPVF~Vtn~~g~pvli~~~~g~~~v~~~F~-------s~~DA~a~L~~lk~~~P~~~~~~kV~~vsL~~vy~l----k 148 (271)
+..|=|.++|.+|..+..++-.| +.+.++|+ +..+... |+++.. ++ .++.|..|+.|....+ +
T Consensus 56 ~~aPdf~l~d~~G~~v~L~d~~G-k~vvl~F~~~~~c~~C~~e~~~-l~~l~~---~~-~~v~vv~Is~D~~~~~~~~~~ 129 (200)
T 3zrd_A 56 DKAKDFTLVAKDLSDVALSSFAG-KRKVLNIFPSIDTGVCAASVRK-FNQLAG---EL-ENTVVLCISSDLPFAQSRFCG 129 (200)
T ss_dssp CBCCCCEEECTTSCEEEGGGGTT-SEEEEEECSCCCCSCCCHHHHH-HHHHHH---TS-TTEEEEEEESSCHHHHTTCTT
T ss_pred CCCCCeEEECCCCCEEcHHHhCC-CcEEEEEECCCCCchhHHHHHH-HHHHHH---Hh-CCCEEEEEECCCHHHHHHHHH
Confidence 46788999999999998876666 44444444 2344333 334433 33 5799999999977666 3
Q ss_pred cCCe-eEEEecCH--HHHHHHHHh
Q 024182 149 VEGI-AFRFLPDP--AQIRNALEL 169 (271)
Q Consensus 149 ~~~i-~f~fvP~~--~qv~~A~~L 169 (271)
..++ .|.++.|. .++..+..+
T Consensus 130 ~~~~~~f~~l~D~~~~~~~~~ygv 153 (200)
T 3zrd_A 130 AEGLSNVITLSTLRGADFKQAYGV 153 (200)
T ss_dssp TTTCTTEEEEETTSCTHHHHHTTC
T ss_pred HcCCCCceEEecCchHHHHHHhCc
Confidence 3578 89999887 444444333
No 17
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=56.23 E-value=21 Score=27.73 Aligned_cols=77 Identities=18% Similarity=0.245 Sum_probs=49.4
Q ss_pred CccEEEEEcCCCCeEEEeCCCCCeeEEEEEe-------cHHHHHHHHHHHHHhcccccCCceEEEEehhhHHhh----hc
Q 024182 81 GTAVYTVSNSSNEFVLISDPNGAKSIGLLCF-------RQEDAEAFLAQVRLRRKELRSAAKVVPITLDQVYML----KV 149 (271)
Q Consensus 81 ~VPVF~Vtn~~g~pvli~~~~g~~~v~~~F~-------s~~DA~a~L~~lk~~~P~~~~~~kV~~vsL~~vy~l----k~ 149 (271)
..|-|.++|.+|..+..+.-.|...+.++|+ +...... |.++..+..+ .+++|..|+.|..-.+ +.
T Consensus 7 ~~P~f~l~~~~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~-l~~~~~~~~~--~~v~vv~vs~d~~~~~~~~~~~ 83 (161)
T 3drn_A 7 KAPLFEGIADNGEKISLSDYIGKHNIVLYFYPKDDTPGSTREASA-FRDNWDLLKD--YDVVVIGVSSDDINSHKRFKEK 83 (161)
T ss_dssp BCCCCEEEETTSCEEEGGGTTTTSEEEEEECSCTTCHHHHHHHHH-HHHTHHHHHT--TCEEEEEEESCCHHHHHHHHHH
T ss_pred cCCCeEeecCCCCEEEHHHhcCCCCEEEEEEcCCCCCchHHHHHH-HHHHHHHHHH--cCCEEEEEeCCCHHHHHHHHHH
Confidence 5788999999999998876565442555665 3443333 2333332222 3589999999865554 33
Q ss_pred CCeeEEEecCH
Q 024182 150 EGIAFRFLPDP 160 (271)
Q Consensus 150 ~~i~f~fvP~~ 160 (271)
.++.|.++.|.
T Consensus 84 ~~~~~~~~~d~ 94 (161)
T 3drn_A 84 YKLPFILVSDP 94 (161)
T ss_dssp TTCCSEEEECT
T ss_pred hCCCceEEECC
Confidence 56778888774
No 18
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=53.45 E-value=60 Score=23.69 Aligned_cols=60 Identities=17% Similarity=0.187 Sum_probs=38.8
Q ss_pred CCccEEEEEcCCCCeEEEeCCCCCeeEEEEEecH-----HHHHHHHHHHHHhcccccCCceEEEEehhh
Q 024182 80 AGTAVYTVSNSSNEFVLISDPNGAKSIGLLCFRQ-----EDAEAFLAQVRLRRKELRSAAKVVPITLDQ 143 (271)
Q Consensus 80 ~~VPVF~Vtn~~g~pvli~~~~g~~~v~~~F~s~-----~DA~a~L~~lk~~~P~~~~~~kV~~vsL~~ 143 (271)
...|-|.++|.+|..+..+. +| +.+.+.|+.. ......++++.+..++ .+++|..|+.+.
T Consensus 13 ~~~p~~~l~~~~g~~~~l~~-~g-k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~v~v~~d~ 77 (145)
T 3erw_A 13 AVPAVFLMKTIEGEDISIPN-KG-QKTILHFWTSWCPPCKKELPQFQSFYDAHPS--DSVKLVTVNLVN 77 (145)
T ss_dssp CSCCEEEEECTTSCEEEESC-TT-SEEEEEEECSSCHHHHHHHHHHHHHHHHCCC--SSEEEEEEECGG
T ss_pred CcCCCceeecCCCCEEeHHH-CC-CEEEEEEECCCCHHHHHHHHHHHHHHHHcCC--CCEEEEEEEccC
Confidence 45899999999999998876 54 4455555531 2223344555554432 468888888764
No 19
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=51.59 E-value=57 Score=24.89 Aligned_cols=57 Identities=12% Similarity=0.223 Sum_probs=37.3
Q ss_pred CccEEEEEcCCCCeEEEeCCCCCeeEEEEEecH-----HHHHHHHHHHHHhcccccCCceEEEEehh
Q 024182 81 GTAVYTVSNSSNEFVLISDPNGAKSIGLLCFRQ-----EDAEAFLAQVRLRRKELRSAAKVVPITLD 142 (271)
Q Consensus 81 ~VPVF~Vtn~~g~pvli~~~~g~~~v~~~F~s~-----~DA~a~L~~lk~~~P~~~~~~kV~~vsL~ 142 (271)
..|-|.++|.+|..+..+.-.| +.+...|+.. ......|.++.+..+ +++|..|+.+
T Consensus 16 ~~p~~~l~~~~g~~~~l~~~~g-k~~lv~F~~~~C~~C~~~~~~l~~l~~~~~----~v~vv~i~~d 77 (165)
T 3ha9_A 16 REASFSLTTIDGEVISLNNVGG-DVVILWFMAAWCPSCVYMADLLDRLTEKYR----EISVIAIDFW 77 (165)
T ss_dssp HHHCCCEEBTTSCEECGGGCCS-SEEEEEEECTTCTTHHHHHHHHHHHHHHCT----TEEEEEEECC
T ss_pred cCCCCEeecCCCCEeeHHHhCC-CEEEEEEECCCCcchhhhHHHHHHHHHHcC----CcEEEEEEec
Confidence 4688999999999887766555 5455555531 222344555555443 7888888887
No 20
>2z0r_A Putative uncharacterized protein TTHA0547; alpha/beta protein, structural genomics, unknown function; 2.30A {Thermus thermophilus}
Probab=49.89 E-value=20 Score=27.69 Aligned_cols=51 Identities=20% Similarity=0.303 Sum_probs=39.0
Q ss_pred ccEEEEEcCCCCeEEEeCCCCCeeEEEEEecHHHHHHHHHHHHHhcccccCCceEEEEe
Q 024182 82 TAVYTVSNSSNEFVLISDPNGAKSIGLLCFRQEDAEAFLAQVRLRRKELRSAAKVVPIT 140 (271)
Q Consensus 82 VPVF~Vtn~~g~pvli~~~~g~~~v~~~F~s~~DA~a~L~~lk~~~P~~~~~~kV~~vs 140 (271)
=|.|.+.+..|+.++..... ....++|.|.+.|++|+.. .|. .+.+|.+..
T Consensus 7 g~wY~L~~~~gEhl~L~~lg--~rlAliwTs~~~A~~f~~~----~p~--~Gm~V~~l~ 57 (103)
T 2z0r_A 7 GTWYVLEGDPGEHLVVEALG--ERLSGIWTSRELAEAFLAH----HPH--LGMRVSALE 57 (103)
T ss_dssp SCEEEEESSTTCCCEEEETT--EEEEEEBSCHHHHHHHHHT----SCS--SCCEEEEEC
T ss_pred CCEEEecCCcCceeEEeccC--CceEEEEechHHHHHHHhh----CCc--cccEEeecc
Confidence 38899999899888886533 3588999999999999754 566 457776653
No 21
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=49.68 E-value=92 Score=24.39 Aligned_cols=133 Identities=14% Similarity=0.065 Sum_probs=69.0
Q ss_pred Ccc-EEEEEcCCCCeEEEeCCCCCeeEEEEEe-------cHHHHHHHHHHHHHhcccccCCceEEEEehhh---HHhh--
Q 024182 81 GTA-VYTVSNSSNEFVLISDPNGAKSIGLLCF-------RQEDAEAFLAQVRLRRKELRSAAKVVPITLDQ---VYML-- 147 (271)
Q Consensus 81 ~VP-VF~Vtn~~g~pvli~~~~g~~~v~~~F~-------s~~DA~a~L~~lk~~~P~~~~~~kV~~vsL~~---vy~l-- 147 (271)
.+| -|+++|.+|..+..+.-.| +.+.+.|+ +..+.. .|+++.++..+.+.+++|..|++|. .-.+
T Consensus 6 ~~P~~f~l~d~~G~~v~l~~~~G-k~vll~F~~t~C~~~C~~~~~-~l~~~~~~~~~~~~~~~vv~is~d~~d~~~~~~~ 83 (170)
T 3me7_A 6 YVPGDITLVDSYGNEFQLKNLKG-KPIILSPIYTHCRAACPLITK-SLLKVIPKLGTPGKDFWVITFTFDPKDTLEDIKR 83 (170)
T ss_dssp BCCTTCEEEETTCCEEEGGGGTT-SCEEEEEECTTCCSHHHHHHH-HHHTTHHHHCCBTTTBEEEEEECCTTCCHHHHHH
T ss_pred cCCCCeEEEcCCcCEEchHHhCC-CEEEEEEECCCCCchhHHHHH-HHHHHHHHhhhcCCceEEEEEECCCCCCHHHHHH
Confidence 578 8999999999988766555 44444444 122222 2333333322224579999999872 1111
Q ss_pred --hcCC---eeEEE--ecCHHHHHHHHHhhhhccC---CCCCCceEEeccceeEeeCCe---EEeeeeecHHHHHHHHHH
Q 024182 148 --KVEG---IAFRF--LPDPAQIRNALELKAADVR---TGFDGVPVFQSELLVVKKKNK---RYCPVYFQKEDIEKELSK 214 (271)
Q Consensus 148 --k~~~---i~f~f--vP~~~qv~~A~~L~~~~~~---~~f~GVPVF~~~~Lti~~~~~---~~~PvFFskeDl~~~l~~ 214 (271)
+..+ ..|.| ..+..++....+-...... ..+...|.+ ..|.++|+ .+...-++.+++.+.|++
T Consensus 84 ~~~~~~~~~~~w~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~----~lID~~G~i~~~~~g~~~~~~~i~~~l~~ 159 (170)
T 3me7_A 84 FQKEYGIDGKGWKVVKAKTSEDLFKLLDAIDFRFMTAGNDFIHPNVV----VVLSPELQIKDYIYGVNYNYLEFVNALRL 159 (170)
T ss_dssp HHHHTTCCSSSEEEEEESSHHHHHHHHHHTTCCCEEETTEEECCCEE----EEECTTSBEEEEEESSSCCHHHHHHHHHH
T ss_pred HHHHcCCCCCCeEEEeCCCHHHHHHHHHHCCeEEecCCCccccCceE----EEECCCCeEEEEEeCCCCCHHHHHHHHHH
Confidence 1122 34444 4676666553332110000 112233422 22334443 224445678999999988
Q ss_pred HHHhc
Q 024182 215 VSRAS 219 (271)
Q Consensus 215 ~kk~~ 219 (271)
+.+..
T Consensus 160 ~~~~~ 164 (170)
T 3me7_A 160 ARGEG 164 (170)
T ss_dssp HTTCS
T ss_pred hhccc
Confidence 86643
No 22
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=48.00 E-value=96 Score=24.13 Aligned_cols=126 Identities=11% Similarity=0.065 Sum_probs=64.2
Q ss_pred CCccEEEEEcC--CCCeEEEeCCCCCeeEEEEEec------HHHHHHHHHHHHHhcccccCCc------eEEEEehhh--
Q 024182 80 AGTAVYTVSNS--SNEFVLISDPNGAKSIGLLCFR------QEDAEAFLAQVRLRRKELRSAA------KVVPITLDQ-- 143 (271)
Q Consensus 80 ~~VPVF~Vtn~--~g~pvli~~~~g~~~v~~~F~s------~~DA~a~L~~lk~~~P~~~~~~------kV~~vsL~~-- 143 (271)
..+|=|.+++- +|..+..+.-.| +.+.++|+. +... ..|+++.+..++ .++ +|..|+.+.
T Consensus 35 ~~~p~f~l~~~~~~g~~~~l~~~~g-k~vlv~F~a~~C~~C~~~~-~~l~~l~~~~~~--~~~~~~~~v~~v~v~~d~~~ 110 (183)
T 3lwa_A 35 QQLPDIGGDSLMEEGTQINLSDFEN-QVVILNAWGQWCAPCRSES-DDLQIIHEELQA--AGNGDTPGGTVLGINVRDYS 110 (183)
T ss_dssp CCCCCCEEEBSSSTTCEEEGGGGTT-SEEEEEEECTTCHHHHHHH-HHHHHHHHHHHH--CC---CCSEEEEEEECSCCC
T ss_pred CCCCceeccccccCCcEecHHHhCC-CEEEEEEECCcCHhHHHHH-HHHHHHHHHHHh--cCCCccCCcEEEEEECCCCC
Confidence 56899999999 999998866555 445444442 2222 223344433332 225 888888775
Q ss_pred HHhh----hcCCeeEEEecCHHHHHHHHHhhhhccCCCCCCceEEeccceeEeeCCeEE--eeeeecHHHHHHHHHHHHH
Q 024182 144 VYML----KVEGIAFRFLPDPAQIRNALELKAADVRTGFDGVPVFQSELLVVKKKNKRY--CPVYFQKEDIEKELSKVSR 217 (271)
Q Consensus 144 vy~l----k~~~i~f~fvP~~~qv~~A~~L~~~~~~~~f~GVPVF~~~~Lti~~~~~~~--~PvFFskeDl~~~l~~~kk 217 (271)
.-.+ +..++.|.++-+... .+...-+.-...++|-++ .+.++++.+ ..=..+.+++.+.++++.+
T Consensus 111 ~~~~~~~~~~~~~~~~~~~d~~~-----~~~~~~~~~~v~~~P~~~----lid~~G~i~~~~~g~~~~~~l~~~l~~ll~ 181 (183)
T 3lwa_A 111 RDIAQDFVTDNGLDYPSIYDPPF-----MTAASLGGVPASVIPTTI----VLDKQHRPAAVFLREVTSKDVLDVALPLVD 181 (183)
T ss_dssp HHHHHHHHHHTTCCSCEEECTTC-----GGGGGTTTCCTTCCSEEE----EECTTSCEEEEECSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCccEEECCcc-----hHHHHhccCCCCCCCeEE----EECCCCcEEEEEcCCCCHHHHHHHHHHHHh
Confidence 2111 234555555544321 111110111235788322 222222211 0112478999999988765
Q ss_pred h
Q 024182 218 A 218 (271)
Q Consensus 218 ~ 218 (271)
+
T Consensus 182 ~ 182 (183)
T 3lwa_A 182 E 182 (183)
T ss_dssp C
T ss_pred c
Confidence 3
No 23
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=44.92 E-value=55 Score=24.56 Aligned_cols=123 Identities=14% Similarity=0.035 Sum_probs=67.5
Q ss_pred CccEEEEEcCCCCeEEEeCCCCCeeEEEEEecH-----HHHHHHHHHHHHhcccccCCceEEEEeh---hhHHhh----h
Q 024182 81 GTAVYTVSNSSNEFVLISDPNGAKSIGLLCFRQ-----EDAEAFLAQVRLRRKELRSAAKVVPITL---DQVYML----K 148 (271)
Q Consensus 81 ~VPVF~Vtn~~g~pvli~~~~g~~~v~~~F~s~-----~DA~a~L~~lk~~~P~~~~~~kV~~vsL---~~vy~l----k 148 (271)
.+|-|.++|.+|..+....-. +.+.++|+.. ......|.++.+. + +++|..|+. +..-.+ +
T Consensus 10 ~~p~f~l~~~~g~~~~l~~~~--k~vll~f~~~~C~~C~~~~~~l~~l~~~---~--~v~~v~v~~d~~~~~~~~~~~~~ 82 (154)
T 3ia1_A 10 PLPDFLLLDPKGQPVTPATVS--KPAVIVFWASWCTVCKAEFPGLHRVAEE---T--GVPFYVISREPRDTREVVLEYMK 82 (154)
T ss_dssp ECCCCCEECTTSCEECTTTSC--SSEEEEEECTTCHHHHHHHHHHHHHHHH---H--CCCEEEEECCTTCCHHHHHHHHT
T ss_pred cCCceEEECCCCCEechHHcC--CeEEEEEEcccChhHHHHHHHHHHHHHH---c--CCeEEEEeCCCcccHHHHHHHHH
Confidence 468899999999988775433 4455555531 1222234444443 3 688999988 322222 3
Q ss_pred cCCeeEEEecCHHHHHHHHHhhhhccCCCCCCceEEeccceeEeeCCeEE--eeeeecHHHHHHHHHHHHHhc
Q 024182 149 VEGIAFRFLPDPAQIRNALELKAADVRTGFDGVPVFQSELLVVKKKNKRY--CPVYFQKEDIEKELSKVSRAS 219 (271)
Q Consensus 149 ~~~i~f~fvP~~~qv~~A~~L~~~~~~~~f~GVPVF~~~~Lti~~~~~~~--~PvFFskeDl~~~l~~~kk~~ 219 (271)
..++.|.++-+...-. ..+.+. =+..++|-++ .+.++|+.+ ..=+.+.+++.+.+++..+..
T Consensus 83 ~~~~~~~~~~d~~~~~--~~~~~~---~~v~~~P~~~----lid~~G~i~~~~~g~~~~~~l~~~l~~~~~~~ 146 (154)
T 3ia1_A 83 TYPRFIPLLASDRDRP--HEVAAR---FKVLGQPWTF----VVDREGKVVALFAGRAGREALLDALLLAGADL 146 (154)
T ss_dssp TCTTEEECBCCSSCCH--HHHHTT---SSBCSSCEEE----EECTTSEEEEEEESBCCHHHHHHHHHHTTCCC
T ss_pred HcCCCcccccccccch--HHHHHH---hCCCcccEEE----EECCCCCEEEEEcCCCCHHHHHHHHHhccCcc
Confidence 4567888877621111 112211 1124788533 233344321 122468899999998886654
No 24
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=42.79 E-value=24 Score=28.22 Aligned_cols=76 Identities=17% Similarity=0.295 Sum_probs=48.9
Q ss_pred CccEEEEE-cCCCCeEEEeCC-CCCeeEEEEEe-------cHH-HHHHHHHHHHHhcccccCCc-eEEEEehhhHHhh--
Q 024182 81 GTAVYTVS-NSSNEFVLISDP-NGAKSIGLLCF-------RQE-DAEAFLAQVRLRRKELRSAA-KVVPITLDQVYML-- 147 (271)
Q Consensus 81 ~VPVF~Vt-n~~g~pvli~~~-~g~~~v~~~F~-------s~~-DA~a~L~~lk~~~P~~~~~~-kV~~vsL~~vy~l-- 147 (271)
..|-|++. |.+|..+..++- .|.. +.++|+ +.. ++..+.+..++-. ..++ +|..|+.+....+
T Consensus 8 ~aP~f~l~~~~~G~~v~L~d~~~Gk~-vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~---~~gv~~vv~Is~d~~~~~~~ 83 (167)
T 2wfc_A 8 KLPAVTVFGATPNDKVNMAELFAGKK-GVLFAVPGAFTPGSSKTHLPGYVEQAAAIH---GKGVDIIACMAVNDSFVMDA 83 (167)
T ss_dssp BCCCCEEESSSTTCEEEHHHHTTTSE-EEEEEESCTTCHHHHHTHHHHHHHTHHHHH---HTTCCEEEEEESSCHHHHHH
T ss_pred cCCCcEeecCCCCcEEeHHHHhCCCc-EEEEEeCCCCCCCCCHHHHHHHHHHHHHHH---HCCCCEEEEEeCCCHHHHHH
Confidence 47889999 999998887664 5544 555554 344 5444433222211 1468 9999999876655
Q ss_pred --hcCCee--EEEecCH
Q 024182 148 --KVEGIA--FRFLPDP 160 (271)
Q Consensus 148 --k~~~i~--f~fvP~~ 160 (271)
+..++. |.++.|.
T Consensus 84 ~~~~~~~~~~fp~l~D~ 100 (167)
T 2wfc_A 84 WGKAHGADDKVQMLADP 100 (167)
T ss_dssp HHHHTTCTTTSEEEECT
T ss_pred HHHhcCCCcceEEEECC
Confidence 335666 8888885
No 25
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=40.61 E-value=21 Score=27.74 Aligned_cols=78 Identities=19% Similarity=0.175 Sum_probs=49.0
Q ss_pred CCccEEEEEcCCCCeEEEeCCCCCeeEEEEEecH---HHHHHHHHHHHHhcccccCCceEEEEehhhHHhh----hcCCe
Q 024182 80 AGTAVYTVSNSSNEFVLISDPNGAKSIGLLCFRQ---EDAEAFLAQVRLRRKELRSAAKVVPITLDQVYML----KVEGI 152 (271)
Q Consensus 80 ~~VPVF~Vtn~~g~pvli~~~~g~~~v~~~F~s~---~DA~a~L~~lk~~~P~~~~~~kV~~vsL~~vy~l----k~~~i 152 (271)
..+|-|.++|.+|..+..+.-.|. .+.+.|+.. .-..+.+..+++...++ .+++|..|+.|..-.+ +..++
T Consensus 22 ~~~p~f~l~~~~G~~~~l~~~~gk-~~vl~F~~~~~C~~C~~~~~~l~~l~~~~-~~~~vv~is~d~~~~~~~~~~~~~~ 99 (167)
T 2jsy_A 22 DQAPDFTVLTNSLEEKSLADMKGK-VTIISVIPSIDTGVCDAQTRRFNEEAAKL-GDVNVYTISADLPFAQARWCGANGI 99 (167)
T ss_dssp SCCCCCEEEBTTCCEEEHHHHTTS-CEEEEECSCSTTSHHHHTHHHHHHHHHHH-SSCEEEEEECSSGGGTSCCGGGSSC
T ss_pred CcCCceEEECCCCCEeeHHHhCCC-eEEEEEecCCCCCchHHHHHHHHHHHHHc-CCCEEEEEECCCHHHHHHHHHhcCC
Confidence 357889999999998887654553 344444421 23334444444433344 6799999999865444 23466
Q ss_pred -eEEEecC
Q 024182 153 -AFRFLPD 159 (271)
Q Consensus 153 -~f~fvP~ 159 (271)
.|.++-|
T Consensus 100 ~~~~~~~d 107 (167)
T 2jsy_A 100 DKVETLSD 107 (167)
T ss_dssp TTEEEEEG
T ss_pred CCceEeeC
Confidence 7888877
No 26
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=37.89 E-value=9.5 Score=29.59 Aligned_cols=79 Identities=18% Similarity=0.204 Sum_probs=47.6
Q ss_pred CccEEE--EEcCCCCeEEEeCCCCCeeEEEEEec---HHHHHHHHHHHHHhccccc-CCceEEEEehhhHHhh----hcC
Q 024182 81 GTAVYT--VSNSSNEFVLISDPNGAKSIGLLCFR---QEDAEAFLAQVRLRRKELR-SAAKVVPITLDQVYML----KVE 150 (271)
Q Consensus 81 ~VPVF~--Vtn~~g~pvli~~~~g~~~v~~~F~s---~~DA~a~L~~lk~~~P~~~-~~~kV~~vsL~~vy~l----k~~ 150 (271)
.+|-|. ++|.+|..+..+.-.|. .+.++|+. -......+..+.+...++. .+++|..|+.|..-.+ +..
T Consensus 12 ~~P~f~~~l~~~~G~~~~l~~~~gk-~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~ 90 (163)
T 3gkn_A 12 PAATFDLPLSLSGGTQTTLRAHAGH-WLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRDSVKSHDNFCAKQ 90 (163)
T ss_dssp CGGGGGCCEECSTTCEECSGGGTTS-CEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHH
T ss_pred cCCCccccccCCCCCEEEHHHhCCC-cEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHh
Confidence 567888 99999998877665554 45445552 1223333333333222222 4689999999855544 234
Q ss_pred CeeEEEecCH
Q 024182 151 GIAFRFLPDP 160 (271)
Q Consensus 151 ~i~f~fvP~~ 160 (271)
++.|.++-|.
T Consensus 91 ~~~~~~~~d~ 100 (163)
T 3gkn_A 91 GFAFPLVSDG 100 (163)
T ss_dssp CCSSCEEECT
T ss_pred CCCceEEECC
Confidence 6777777764
No 27
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=36.58 E-value=10 Score=29.82 Aligned_cols=76 Identities=17% Similarity=0.237 Sum_probs=47.8
Q ss_pred CccEEEEEcCCCCeEEEeCCCCCeeEEEEEe-------cHHHHHHHHHHHHHhcccc-cCCceEEEEehhhHHhh----h
Q 024182 81 GTAVYTVSNSSNEFVLISDPNGAKSIGLLCF-------RQEDAEAFLAQVRLRRKEL-RSAAKVVPITLDQVYML----K 148 (271)
Q Consensus 81 ~VPVF~Vtn~~g~pvli~~~~g~~~v~~~F~-------s~~DA~a~L~~lk~~~P~~-~~~~kV~~vsL~~vy~l----k 148 (271)
..|=|++.|.+|+.+..++-.|. .+.+.|+ +..+...+ .+...+. ..++.|..|+.|....+ +
T Consensus 9 ~aPdF~l~~~~G~~~~l~d~~Gk-~vvl~f~~~~~c~~C~~e~~~l----~~~~~~~~~~~~~~v~vs~d~~~~~~~~~~ 83 (157)
T 4g2e_A 9 LAPDFELPDTELKKVKLSALKGK-VVVLAFYPAAFTQVCTKEMCTF----RDSMAKFNQVNAVVLGISVDPPFSNKAFKE 83 (157)
T ss_dssp BCCCCEEEBTTSCEEEGGGGTTS-CEEEEECSCTTCCC------CC----SCGGGGGGGCSSEEEEEESSCHHHHHHHHH
T ss_pred CCcCeEeECCCCCEEeHHHHCCC-eEEEEecCCCCCCccccchhhc----ccccccccccCceEeeecccchhHHHHHHH
Confidence 56889999999999988766664 4555554 23333322 2222222 24688999999877665 3
Q ss_pred cCCeeEEEecCHH
Q 024182 149 VEGIAFRFLPDPA 161 (271)
Q Consensus 149 ~~~i~f~fvP~~~ 161 (271)
..++.|.++-|..
T Consensus 84 ~~~~~~p~l~D~~ 96 (157)
T 4g2e_A 84 HNKLNFTILSDYN 96 (157)
T ss_dssp HTTCCSEEEECTT
T ss_pred HcCCcEEEEEcCC
Confidence 4678888887764
No 28
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=34.41 E-value=31 Score=27.96 Aligned_cols=84 Identities=15% Similarity=0.270 Sum_probs=51.5
Q ss_pred CccEEEEE-cCCCCeEEEeC-CCCCeeEEEEEe-------cH-HHHHHHHHHHHHhcccccCCceEEE-EehhhHHhh--
Q 024182 81 GTAVYTVS-NSSNEFVLISD-PNGAKSIGLLCF-------RQ-EDAEAFLAQVRLRRKELRSAAKVVP-ITLDQVYML-- 147 (271)
Q Consensus 81 ~VPVF~Vt-n~~g~pvli~~-~~g~~~v~~~F~-------s~-~DA~a~L~~lk~~~P~~~~~~kV~~-vsL~~vy~l-- 147 (271)
..|-|++. +.+|+.+-.++ -.|.. +.++|+ +. +++-.|.+...+-. ..++.|.. ++.|....+
T Consensus 20 ~aPdf~l~~~~~g~~v~L~d~~~gk~-vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~---~~gv~vv~~iS~D~~~~~~~ 95 (173)
T 3mng_A 20 AIPAVEVFEGEPGNKVNLAELFKGKK-GVLFGVPGAFTPGCSKTHLPGFVEQAEALK---AKGVQVVACLSVNDAFVTGE 95 (173)
T ss_dssp BCCCCEEECSSTTCEEEHHHHTTTSE-EEEEECSCTTCHHHHHTHHHHHHHTHHHHH---TTTCCEEEEEESSCHHHHHH
T ss_pred CCCCeEeeeCCCCCEEEhHHHhCCCc-EEEEEEeCCCCCCCCHHHHHHHHHHHHHHH---hCCCEEEEEEcCCCHHHHHH
Confidence 46888998 89999887765 35543 544554 34 35555443332211 24688885 999987766
Q ss_pred --hcCCee--EEEecCHH-HHHHHHH
Q 024182 148 --KVEGIA--FRFLPDPA-QIRNALE 168 (271)
Q Consensus 148 --k~~~i~--f~fvP~~~-qv~~A~~ 168 (271)
+..++. |.++-|.. ++..+..
T Consensus 96 f~~~~~~~~~fp~l~D~~~~va~~yG 121 (173)
T 3mng_A 96 WGRAHKAEGKVRLLADPTGAFGKETD 121 (173)
T ss_dssp HHHHTTCTTTCEEEECTTCHHHHHHT
T ss_pred HHHHhCCCCceEEEECCChHHHHHhC
Confidence 335665 89999864 3433333
No 29
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=34.31 E-value=28 Score=30.04 Aligned_cols=127 Identities=12% Similarity=0.190 Sum_probs=74.1
Q ss_pred CCccEEEEEcCCCCeEEEeCCCCCeeEEEEEe-------cH-----HHHHHHHHHHHHhcccccCCceEEEEehhhHHhh
Q 024182 80 AGTAVYTVSNSSNEFVLISDPNGAKSIGLLCF-------RQ-----EDAEAFLAQVRLRRKELRSAAKVVPITLDQVYML 147 (271)
Q Consensus 80 ~~VPVF~Vtn~~g~pvli~~~~g~~~v~~~F~-------s~-----~DA~a~L~~lk~~~P~~~~~~kV~~vsL~~vy~l 147 (271)
...|-|++.|.+|..+..++-.|. .+.++|+ +. .++. .+.+. . .++.|..||.|....+
T Consensus 26 ~~APdFtL~d~~G~~vsLsd~~Gk-~vVL~F~ps~~cp~C~~~~~~~El~----~~~~~---~-~gv~VvgIS~Ds~~~~ 96 (224)
T 3keb_A 26 DYLPSFMLVDDQKHDAALESFSHT-PKLIVTLLSVDEDEHAGLLLLRETR----RFLDS---W-PHLKLIVITVDSPSSL 96 (224)
T ss_dssp CBCCCCEEEETTSCEEEGGGGTTC-CEEEEECSCTTCSTTTSHHHHHHHH----HHHTT---C-TTSEEEEEESSCHHHH
T ss_pred CCCCCeEEECCCCCEEeHHHhCCC-cEEEEEEeCCCCCCCCCCccHHHHH----HHHHH---c-CCCEEEEEECCCHHHH
Confidence 357899999999999887765554 3444554 22 3333 23332 2 5789999999988776
Q ss_pred h----cCCe-eEEEecCH--HHHHHHHHhhhhccCCCCCCceEEeccceeEeeCCeE-Ee---ee---eecHHHHHHHHH
Q 024182 148 K----VEGI-AFRFLPDP--AQIRNALELKAADVRTGFDGVPVFQSELLVVKKKNKR-YC---PV---YFQKEDIEKELS 213 (271)
Q Consensus 148 k----~~~i-~f~fvP~~--~qv~~A~~L~~~~~~~~f~GVPVF~~~~Lti~~~~~~-~~---Pv---FFskeDl~~~l~ 213 (271)
+ ..++ .|.++.|. .++..+..+.... ..+.|++ .-....|.++|+- +. +- --+.+++.++|+
T Consensus 97 ~~f~~~~gl~~fplLsD~~~~~vak~yGv~~~~--~~~~G~~--~p~tfvID~dG~I~~~~~~~~~~~~pd~~evl~~L~ 172 (224)
T 3keb_A 97 ARARHEHGLPNIALLSTLRGRDFHKRYGVLITE--YPLSGYT--SPAIILADAANVVHYSERLANTRDFFDFDAIEKLLQ 172 (224)
T ss_dssp HHHHHHHCCTTCEEEESTTCTTHHHHTTCBCCS--TTSTTCB--CCEEEEECTTCBEEEEEECSBTTCCCCHHHHHHHHH
T ss_pred HHHHHHcCCCCceEEEcCCchHHHHHhCCcccc--ccccCCc--cCEEEEEcCCCEEEEEEecCCCCCCCCHHHHHHHHH
Confidence 3 3567 69999996 4555554443211 1133421 1122333333331 11 11 134788888888
Q ss_pred HHHHhc
Q 024182 214 KVSRAS 219 (271)
Q Consensus 214 ~~kk~~ 219 (271)
.+.++.
T Consensus 173 ~l~~~~ 178 (224)
T 3keb_A 173 EGEQQA 178 (224)
T ss_dssp HHHHHC
T ss_pred Hhhhcc
Confidence 887654
No 30
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=33.42 E-value=63 Score=25.43 Aligned_cols=128 Identities=16% Similarity=0.163 Sum_probs=67.4
Q ss_pred CCccEEEEEcCCCCeEEEeCCCCCeeEEEEEe-------cHHHHHHHHHHHHHhcccccCCceEEEEehhhHHhhh----
Q 024182 80 AGTAVYTVSNSSNEFVLISDPNGAKSIGLLCF-------RQEDAEAFLAQVRLRRKELRSAAKVVPITLDQVYMLK---- 148 (271)
Q Consensus 80 ~~VPVF~Vtn~~g~pvli~~~~g~~~v~~~F~-------s~~DA~a~L~~lk~~~P~~~~~~kV~~vsL~~vy~lk---- 148 (271)
+..|-|.++|.+|..+..+.-.| +.+.+.|+ ++.+.. .|+++..+ .+++|..|+.|....++
T Consensus 22 ~~~P~f~l~~~~G~~v~l~~~~g-k~vvl~F~~t~~C~~C~~~~~-~l~~l~~~-----~~v~vv~Is~D~~~~~~~~~~ 94 (175)
T 1xvq_A 22 SPAPAFTLTGGDLGVISSDQFRG-KSVLLNIFPSVDTPVCATSVR-TFDERAAA-----SGATVLCVSKDLPFAQKRFCG 94 (175)
T ss_dssp SBCCCCEEECTTSCEEEGGGGTT-SCEEEEECSCCCSSCCCHHHH-HHHHHHHH-----TTCEEEEEESSCHHHHTTCC-
T ss_pred CcCCCeEEECCCCCEEeHHHcCC-CEEEEEEEeCCCCchHHHHHH-HHHHHHhh-----cCCEEEEEECCCHHHHHHHHH
Confidence 35788999999999888765555 33444444 233333 33333332 57899999998766552
Q ss_pred cCCe-eEEEecCHH-HHHHHHHhhhhccCCCCCCceEEeccceeEeeCCeEEeeee-----ecHHHHHHHHHHHHHhc
Q 024182 149 VEGI-AFRFLPDPA-QIRNALELKAADVRTGFDGVPVFQSELLVVKKKNKRYCPVY-----FQKEDIEKELSKVSRAS 219 (271)
Q Consensus 149 ~~~i-~f~fvP~~~-qv~~A~~L~~~~~~~~f~GVPVF~~~~Lti~~~~~~~~PvF-----FskeDl~~~l~~~kk~~ 219 (271)
..++ .|.++.|.. ++..+..+... .....|.+ ....+.|.++|+ ++=.| ....++++.++.+.+..
T Consensus 95 ~~~~~~~~~l~D~~~~~~~~~gv~~~--~~~~~g~~--~p~~~lid~~G~-I~~~~~g~~~~~~~~~~~~l~~l~~~~ 167 (175)
T 1xvq_A 95 AEGTENVMPASAFRDSFGEDYGVTIA--DGPMAGLL--ARAIVVIGADGN-VAYTELVPEIAQEPNYEAALAALGATS 167 (175)
T ss_dssp -----CEEEEECTTSSHHHHTTCBBC--SSTTTTSB--CSEEEEECTTSB-EEEEEECSBTTCCCCHHHHHHHHHHTC
T ss_pred HcCCCCceEeeCCHHHHHHHhCCccc--ccccCCcc--cceEEEECCCCe-EEEEEECCCcCCCCCHHHHHHHHHhhc
Confidence 3466 788888854 33332222211 11122321 112334455554 22223 24557777777777654
No 31
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=32.86 E-value=1.5e+02 Score=22.03 Aligned_cols=132 Identities=8% Similarity=0.014 Sum_probs=62.1
Q ss_pred ccEEEEEc-CCCCeEEEeCCCCCeeEEEEEecH--HHHHHHHHHHHHhcccc-cCCceEEEEehhhHHhh----hcCCee
Q 024182 82 TAVYTVSN-SSNEFVLISDPNGAKSIGLLCFRQ--EDAEAFLAQVRLRRKEL-RSAAKVVPITLDQVYML----KVEGIA 153 (271)
Q Consensus 82 VPVF~Vtn-~~g~pvli~~~~g~~~v~~~F~s~--~DA~a~L~~lk~~~P~~-~~~~kV~~vsL~~vy~l----k~~~i~ 153 (271)
+|-|.++. .+|+.+..+.-.| +.+...|... ..-.+++..+.+...++ ..++.|..|+.+..-++ +..++.
T Consensus 3 ~pa~~~~~~~~G~~~~l~~~~g-k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~ 81 (151)
T 3raz_A 3 LSADELAGWKDNTPQSLQSLKA-PVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPVS 81 (151)
T ss_dssp ----CEEETTTCCEECGGGCCS-SEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESSCHHHHHHHHHHSCCS
T ss_pred CCcchhhcccCCCEecHHHhCC-CEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCChHHHHHHHHHcCCC
Confidence 45666666 6888887766554 4454445421 11233333333322233 35688999998755443 224444
Q ss_pred EEEecCHHHHHHHHHhhhhccCCCCCCceEEeccceeEeeCCeEE--eeeeecHHHHHHHHHHHHHhcCC
Q 024182 154 FRFLPDPAQIRNALELKAADVRTGFDGVPVFQSELLVVKKKNKRY--CPVYFQKEDIEKELSKVSRASRG 221 (271)
Q Consensus 154 f~fvP~~~qv~~A~~L~~~~~~~~f~GVPVF~~~~Lti~~~~~~~--~PvFFskeDl~~~l~~~kk~~p~ 221 (271)
|.++-+...- ...+.+.-+ ....|+|-++ .+.++|+.+ ..=..+.+++.+.++++.+..+.
T Consensus 82 ~~~~~~~~~~--~~~~~~~~~-~~v~~~P~~~----lid~~G~i~~~~~g~~~~~~l~~~l~~l~~~~~~ 144 (151)
T 3raz_A 82 YPIWRYTGAN--SRNFMKTYG-NTVGVLPFTV----VEAPKCGYRQTITGEVNEKSLTDAVKLAHSKCRE 144 (151)
T ss_dssp SCEEEECCSC--HHHHHHTTT-CCSCCSSEEE----EEETTTTEEEECCSCCCHHHHHHHHHHHHTC---
T ss_pred CceEecCccc--hHHHHHHhC-CccCCCCEEE----EECCCCcEEEEECCCCCHHHHHHHHHHHHHHhhc
Confidence 4444321100 111111111 1145788443 233333211 11235789999999999886644
No 32
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=31.97 E-value=96 Score=23.03 Aligned_cols=126 Identities=13% Similarity=0.235 Sum_probs=63.4
Q ss_pred CCccEEEEEcCCCCeEEEeCCCCCeeEEEEEecH-----HHHHHHHHHHHHhcccccCCceEEEEehhhH--Hhh----h
Q 024182 80 AGTAVYTVSNSSNEFVLISDPNGAKSIGLLCFRQ-----EDAEAFLAQVRLRRKELRSAAKVVPITLDQV--YML----K 148 (271)
Q Consensus 80 ~~VPVF~Vtn~~g~pvli~~~~g~~~v~~~F~s~-----~DA~a~L~~lk~~~P~~~~~~kV~~vsL~~v--y~l----k 148 (271)
+.+|-|.++|.+|..+-.+.-.| +.+..+|+.. ......+.++.+..++ .+++|..|+.+.- -.+ +
T Consensus 6 ~~~p~~~l~~~~g~~~~l~~~~g-k~vll~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~v~v~~d~~~~~~~~~~~~ 82 (154)
T 3kcm_A 6 NPAPDFTLNTLNGEVVKLSDLKG-QVVIVNFWATWCPPCREEIPSMMRLNAAMAG--KPFRMLCVSIDEGGKVAVEEFFR 82 (154)
T ss_dssp SBCCCCEEECTTSCEEEGGGGTT-SEEEEEEECTTCHHHHHHHHHHHHHHHHTTT--SSEEEEEEECCTTHHHHHHHHHH
T ss_pred CCCCCeEEEcCCCCEEehhhcCC-CEEEEEEECCCCHHHHHHHHHHHHHHHHhcc--CCeEEEEEEcCCcchHHHHHHHH
Confidence 35788999999999888765554 4455455421 1223344555554433 3688888888752 111 2
Q ss_pred cCCeeEEEecCHHHHHHHHHhhhhccCCCCCCceEEeccceeEeeCCeEE---e-eeeecHHHHHHHHHHHHHhcC
Q 024182 149 VEGIAFRFLPDPAQIRNALELKAADVRTGFDGVPVFQSELLVVKKKNKRY---C-PVYFQKEDIEKELSKVSRASR 220 (271)
Q Consensus 149 ~~~i~f~fvP~~~qv~~A~~L~~~~~~~~f~GVPVF~~~~Lti~~~~~~~---~-PvFFskeDl~~~l~~~kk~~p 220 (271)
..++.|.++-+... .+.+. -+..|+|-+ +.+.++|+.+ . ..-++.+++.+.++++....+
T Consensus 83 ~~~~~~~~~~d~~~-----~~~~~---~~v~~~P~~----~lid~~G~i~~~~~g~~~~~~~~l~~~l~~l~~~~~ 146 (154)
T 3kcm_A 83 KTGFTLPVLLDADK-----RVGKL---YGTTGVPET----FVIDRHGVILKKVVGAMEWDHPEVIAFLNNELSKAR 146 (154)
T ss_dssp HHCCCCCEEECTTC-----HHHHH---HTCCSBCEE----EEECTTSBEEEEEESCCCTTSHHHHHHHHTC-----
T ss_pred HcCCCeeEEecCch-----HHHHH---hCCCCCCeE----EEECCCCcEEEEEcCCCccccHHHHHHHHHHHHHhh
Confidence 23444555544321 11111 013478832 2223333311 1 112467788888888776553
No 33
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=31.40 E-value=28 Score=26.56 Aligned_cols=130 Identities=12% Similarity=0.012 Sum_probs=66.6
Q ss_pred ccEEEEEcCCCCeEEEeCCCCCeeEEEEEe-------cHHHHHHHHHHHHHhcccc--cCCceEEEEehhhH----Hhh-
Q 024182 82 TAVYTVSNSSNEFVLISDPNGAKSIGLLCF-------RQEDAEAFLAQVRLRRKEL--RSAAKVVPITLDQV----YML- 147 (271)
Q Consensus 82 VPVF~Vtn~~g~pvli~~~~g~~~v~~~F~-------s~~DA~a~L~~lk~~~P~~--~~~~kV~~vsL~~v----y~l- 147 (271)
.|-|.++|.+|..+..+.-.| +.+.+.|+ ++.... .|+++.++..+. ..+++|..|+.|.- -.+
T Consensus 3 ap~f~l~~~~G~~~~l~~~~g-k~vll~f~~~~C~~~C~~~~~-~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~~ 80 (164)
T 2ggt_A 3 GGPFSLTTHTGERKTDKDYLG-QWLLIYFGFTHCPDVCPEELE-KMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAIA 80 (164)
T ss_dssp CCCCEEEETTSCEEEGGGGTT-CEEEEEEECTTCSSHHHHHHH-HHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHHH
T ss_pred CCCeEEEeCCCCEEeHHHcCC-CEEEEEEEeCCCCchhHHHHH-HHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHHH
Confidence 477999999999988866555 44444443 333332 233333322210 13788999998742 112
Q ss_pred ---hcCCeeEEEecCHHHHHHHHHhhhhccCCCCCCceEEe-----------ccceeEeeCCeEEe--eeeecHHHHHHH
Q 024182 148 ---KVEGIAFRFLPDPAQIRNALELKAADVRTGFDGVPVFQ-----------SELLVVKKKNKRYC--PVYFQKEDIEKE 211 (271)
Q Consensus 148 ---k~~~i~f~fvP~~~qv~~A~~L~~~~~~~~f~GVPVF~-----------~~~Lti~~~~~~~~--PvFFskeDl~~~ 211 (271)
+..++.|.++....+ ....+.+.-+ ..++|.-- ...+.+.++|+.+. .-..+.+++.+.
T Consensus 81 ~~~~~~~~~~~~l~~~~d--~~~~~~~~~~---v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~ 155 (164)
T 2ggt_A 81 NYVKEFSPKLVGLTGTRE--EVDQVARAYR---VYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQNKRKGEIAAS 155 (164)
T ss_dssp HHHHTTCSSCEEEECCHH--HHHHHHHTTT---CCEEEEEECTTSCEEEEECCEEEEECTTSCEEEEEETTCCHHHHHHH
T ss_pred HHHHHcCCCeEEEeCCHH--HHHHHHHhcC---eEEEecCCCCCCCeeEeccceEEEECCCCeEEEEeCCCCCHHHHHHH
Confidence 335667777754321 1122222111 23455211 02233444444221 223577888888
Q ss_pred HHHHHHh
Q 024182 212 LSKVSRA 218 (271)
Q Consensus 212 l~~~kk~ 218 (271)
++++.++
T Consensus 156 l~~ll~~ 162 (164)
T 2ggt_A 156 IATHMRP 162 (164)
T ss_dssp HHHHHGG
T ss_pred HHHHHHh
Confidence 8887654
No 34
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=31.26 E-value=1.4e+02 Score=24.85 Aligned_cols=130 Identities=10% Similarity=0.104 Sum_probs=68.1
Q ss_pred CccEEEEEcC--CCCeEEEeCCCCCeeEEEEEe-------cHHHHHHHHHHHHHhccccc-CCceEEEEehhhHHhh---
Q 024182 81 GTAVYTVSNS--SNEFVLISDPNGAKSIGLLCF-------RQEDAEAFLAQVRLRRKELR-SAAKVVPITLDQVYML--- 147 (271)
Q Consensus 81 ~VPVF~Vtn~--~g~pvli~~~~g~~~v~~~F~-------s~~DA~a~L~~lk~~~P~~~-~~~kV~~vsL~~vy~l--- 147 (271)
..|=|.+++. +| .+-.++-.|.+.+.+||+ +..+.. .+.+...++. .+++|..|+.|.....
T Consensus 8 ~aP~F~l~~~~~~G-~v~l~d~~Gk~~vvL~f~~a~~cp~C~~el~----~l~~l~~~f~~~~v~vi~vS~D~~~~~~~~ 82 (220)
T 1xcc_A 8 TFPNFTAKASGIDG-DFELYKYIENSWAILFSHPNDFTPVCTTELA----ELGKMHEDFLKLNCKLIGFSCNSKESHDKW 82 (220)
T ss_dssp BCCCCEECBTTCSS-CEEHHHHTTTSEEEEECCSCTTCHHHHHHHH----HHHHTHHHHHTTTEEEEEEESSCHHHHHHH
T ss_pred CCCCcEeecccCCC-cEeHHHHcCCCeEEEEEECCCCCCCCHHHHH----HHHHHHHHHHHcCCEEEEEeCCCHHHHHHH
Confidence 4678888888 77 555544345434555554 233333 2333222332 4699999999876543
Q ss_pred -h-------cCCeeEEEecCHH-HHHHHHHhhhhccCCCCCCceEEeccceeEeeCCeEEeeee-------ecHHHHHHH
Q 024182 148 -K-------VEGIAFRFLPDPA-QIRNALELKAADVRTGFDGVPVFQSELLVVKKKNKRYCPVY-------FQKEDIEKE 211 (271)
Q Consensus 148 -k-------~~~i~f~fvP~~~-qv~~A~~L~~~~~~~~f~GVPVF~~~~Lti~~~~~~~~PvF-------FskeDl~~~ 211 (271)
+ ..++.|.++-|.. ++..+..+....... -.|.++-.-....|.++|+-. =.+ -+.+++.+.
T Consensus 83 ~~~i~~~~~~~~~~fpil~D~~~~va~~ygv~~~~~~~-~~g~~~~~p~~flID~~G~I~-~~~~~~~~~g~~~~ell~~ 160 (220)
T 1xcc_A 83 IEDIKYYGKLNKWEIPIVCDESRELANKLKIMDEQEKD-ITGLPLTCRCLFFISPEKKIK-ATVLYPATTGRNAHEILRV 160 (220)
T ss_dssp HHHHHHHHTCSCCCCCEEECTTSHHHHHHTCEEEEEEC-TTSCEEECEEEEEECTTSBEE-EEEEECTTBCCCHHHHHHH
T ss_pred HHHHHHHhcCCCCcceeEECchhHHHHHhCCCCccccc-CCCCCcccceEEEECCCCEEE-EEEecCCCCCCCHHHHHHH
Confidence 1 3467888888852 344433333211101 124333233334455554422 122 256788888
Q ss_pred HHHHHH
Q 024182 212 LSKVSR 217 (271)
Q Consensus 212 l~~~kk 217 (271)
++.+..
T Consensus 161 i~~lq~ 166 (220)
T 1xcc_A 161 LKSLQL 166 (220)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 777754
No 35
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=31.17 E-value=22 Score=26.44 Aligned_cols=49 Identities=16% Similarity=0.226 Sum_probs=33.5
Q ss_pred HHHhhc-----CCccEEEEEcCCCCeEEEeCCCCCeeEEEEEecHHHHHHHHHHHH
Q 024182 74 FVSKTL-----AGTAVYTVSNSSNEFVLISDPNGAKSIGLLCFRQEDAEAFLAQVR 124 (271)
Q Consensus 74 ~i~ekL-----~~VPVF~Vtn~~g~pvli~~~~g~~~v~~~F~s~~DA~a~L~~lk 124 (271)
++.+++ .++|.+.+-|.+|..+-... |+.....-+++.++.+++|+++.
T Consensus 79 ~l~~~~~v~~~~~~Pt~~~~d~~G~~~~~~~--g~~~~~~~~~~~~~l~~~l~~l~ 132 (133)
T 3fk8_A 79 ELSQAYGDPIQDGIPAVVVVNSDGKVRYTTK--GGELANARKMSDQGIYDFFAKIT 132 (133)
T ss_dssp HHHHHTTCGGGGCSSEEEEECTTSCEEEECC--SCTTTTGGGSCHHHHHHHHHHHH
T ss_pred HHHHHhCCccCCccceEEEECCCCCEEEEec--CCcccccccCCHHHHHHHHHHhc
Confidence 455554 67999999999998776632 21111123577899999998875
No 36
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=31.01 E-value=89 Score=23.17 Aligned_cols=123 Identities=17% Similarity=0.228 Sum_probs=64.3
Q ss_pred CccEEEEEcCCCCeEEEeCCCCCeeEEEEEecH-----HHHHHHHHHHHHhcccccCCceEEEEehhhHHh-h----hcC
Q 024182 81 GTAVYTVSNSSNEFVLISDPNGAKSIGLLCFRQ-----EDAEAFLAQVRLRRKELRSAAKVVPITLDQVYM-L----KVE 150 (271)
Q Consensus 81 ~VPVF~Vtn~~g~pvli~~~~g~~~v~~~F~s~-----~DA~a~L~~lk~~~P~~~~~~kV~~vsL~~vy~-l----k~~ 150 (271)
.+|-|.++| +|..+-.+...| +.+.++|+.. ......|.++.+..++ .+++|..|+.+.--+ + +..
T Consensus 8 ~~P~f~l~~-~g~~~~l~~~~g-k~vll~f~~~~C~~C~~~~~~l~~l~~~~~~--~~~~~v~v~~d~~~~~~~~~~~~~ 83 (152)
T 3gl3_A 8 KAPDFALPG-KTGVVKLSDKTG-SVVYLDFWASWCGPCRQSFPWMNQMQAKYKA--KGFQVVAVNLDAKTGDAMKFLAQV 83 (152)
T ss_dssp BCCCCEEEB-SSSEEEGGGGTT-SEEEEEEECTTCTHHHHHHHHHHHHHHHHGG--GTEEEEEEECCSSHHHHHHHHHHS
T ss_pred cCCceEeeC-CCCeEeHHHhCC-CEEEEEEECCcCHHHHHHHHHHHHHHHHhhc--CCeEEEEEECCCCHHHHHHHHHHc
Confidence 578899999 998887766554 4455455521 2223334555554443 348888888873221 1 234
Q ss_pred CeeEEEecCHHHHHHHHHhhhhccCCCCCCceEEeccceeEeeCCeEEe---e-eeecHHHHHHHHHHHHHhc
Q 024182 151 GIAFRFLPDPAQIRNALELKAADVRTGFDGVPVFQSELLVVKKKNKRYC---P-VYFQKEDIEKELSKVSRAS 219 (271)
Q Consensus 151 ~i~f~fvP~~~qv~~A~~L~~~~~~~~f~GVPVF~~~~Lti~~~~~~~~---P-vFFskeDl~~~l~~~kk~~ 219 (271)
++.|.++-+... .+.+. =...|+|-++ .+.++|+.+. . .-.+.+++++.+++.....
T Consensus 84 ~~~~~~~~d~~~-----~~~~~---~~v~~~P~~~----lid~~G~i~~~~~g~~~~~~~~l~~~i~~~~~~~ 144 (152)
T 3gl3_A 84 PAEFTVAFDPKG-----QTPRL---YGVKGMPTSF----LIDRNGKVLLQHVGFRPADKEALEQQILAALGGN 144 (152)
T ss_dssp CCCSEEEECTTC-----HHHHH---TTCCSSSEEE----EECTTSBEEEEEESCCTTTHHHHHHHHHHHTC--
T ss_pred CCCCceeECCcc-----hhHHH---cCCCCCCeEE----EECCCCCEEEEEccCCCcCHHHHHHHHHHHHccc
Confidence 555666655432 11111 1134788643 2333333211 1 1135678888888776543
No 37
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=30.74 E-value=66 Score=26.02 Aligned_cols=76 Identities=11% Similarity=-0.072 Sum_probs=43.4
Q ss_pred ccEEEEEcCCCCeEEEeCCCCCeeEEEEEe-------cHHHHHHHHHHHHHhcc-cccCCceEEEEehhh----HHhh--
Q 024182 82 TAVYTVSNSSNEFVLISDPNGAKSIGLLCF-------RQEDAEAFLAQVRLRRK-ELRSAAKVVPITLDQ----VYML-- 147 (271)
Q Consensus 82 VPVF~Vtn~~g~pvli~~~~g~~~v~~~F~-------s~~DA~a~L~~lk~~~P-~~~~~~kV~~vsL~~----vy~l-- 147 (271)
.|-|+++|.+|..+..+.-.| +.+...|. ++.+... |+++...-. +.+.+++|..|+.|. .-.+
T Consensus 21 ~p~f~l~d~~G~~v~l~~~~G-k~vlv~F~at~C~~vC~~~~~~-l~~l~~~~~~~~~~~v~vv~Is~D~~~d~~~~~~~ 98 (200)
T 2b7k_A 21 GGPFHLEDMYGNEFTEKNLLG-KFSIIYFGFSNCPDICPDELDK-LGLWLNTLSSKYGITLQPLFITCDPARDSPAVLKE 98 (200)
T ss_dssp CCCCEEEETTSCEEEGGGGTT-SCEEEEEECTTCCSHHHHHHHH-HHHHHHHHHHHHCCCCEEEEEESCTTTCCHHHHHH
T ss_pred CCCEEEEcCCCCEEeHHHcCC-CEEEEEEECCCCcchhHHHHHH-HHHHHHHHHHhhCCceEEEEEECCCCCCCHHHHHH
Confidence 488999999999988866555 43443443 3333322 233222111 123478999999883 2222
Q ss_pred --hcCCeeEEEecC
Q 024182 148 --KVEGIAFRFLPD 159 (271)
Q Consensus 148 --k~~~i~f~fvP~ 159 (271)
+..+..|.+++.
T Consensus 99 ~~~~~~~~~~~l~~ 112 (200)
T 2b7k_A 99 YLSDFHPSILGLTG 112 (200)
T ss_dssp HHTTSCTTCEEEEC
T ss_pred HHHHcCCCceEEeC
Confidence 234566777765
No 38
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=29.49 E-value=76 Score=22.85 Aligned_cols=118 Identities=14% Similarity=0.133 Sum_probs=62.0
Q ss_pred CccEEEEEcCCCCeEEEeCCCCCeeEEEEEecH-----HHHHHHHHHHHHhcccccCCceEEEEehhh----HHhh-hcC
Q 024182 81 GTAVYTVSNSSNEFVLISDPNGAKSIGLLCFRQ-----EDAEAFLAQVRLRRKELRSAAKVVPITLDQ----VYML-KVE 150 (271)
Q Consensus 81 ~VPVF~Vtn~~g~pvli~~~~g~~~v~~~F~s~-----~DA~a~L~~lk~~~P~~~~~~kV~~vsL~~----vy~l-k~~ 150 (271)
..|-|.++|.+|+.+-...-.| +.+...|.+. ......++++.+.. . ++++..|+.+. +-+. +..
T Consensus 3 ~~p~~~l~~~~g~~~~l~~~~~-k~~lv~f~~~~C~~C~~~~~~l~~~~~~~---~-~~~~~~v~~~~~~~~~~~~~~~~ 77 (136)
T 1lu4_A 3 ERLQFTATTLSGAPFDGASLQG-KPAVLWFWTPWCPFCNAEAPSLSQVAAAN---P-AVTFVGIATRADVGAMQSFVSKY 77 (136)
T ss_dssp GGGCCEEEBTTSCEEEGGGGTT-SCEEEEEECTTCHHHHHHHHHHHHHHHHC---T-TSEEEEEECSSCHHHHHHHHHHH
T ss_pred CCCCeEeecCCCCeecHHHhCC-CEEEEEEECCcChhHHHHHHHHHHHHHHC---C-CcEEEEEEcCCCHHHHHHHHHHc
Confidence 4788999999999888765554 4455455532 22233444554443 3 78888888764 1111 223
Q ss_pred CeeEEEecCHHHHHHHHHhhhhccCCCCCCceEEeccceeEeeCCeEE-ee---eeecHHHHHHHHHHH
Q 024182 151 GIAFRFLPDPAQIRNALELKAADVRTGFDGVPVFQSELLVVKKKNKRY-CP---VYFQKEDIEKELSKV 215 (271)
Q Consensus 151 ~i~f~fvP~~~qv~~A~~L~~~~~~~~f~GVPVF~~~~Lti~~~~~~~-~P---vFFskeDl~~~l~~~ 215 (271)
++.|.++-+... + +.+. -...|+|.++ .+.++|+.+ .. =+.+.+++.+.++++
T Consensus 78 ~~~~~~~~d~~~-~----~~~~---~~i~~~P~~~----lid~~G~i~~~~~~~g~~~~~~l~~~l~~l 134 (136)
T 1lu4_A 78 NLNFTNLNDADG-V----IWAR---YNVPWQPAFV----FYRADGTSTFVNNPTAAMSQDELSGRVAAL 134 (136)
T ss_dssp TCCSEEEECTTS-H----HHHH---TTCCSSSEEE----EECTTSCEEEECCSSSCCCHHHHHHHHHHC
T ss_pred CCCceEEECCch-h----HHHh---cCCCCCCEEE----EECCCCcEEEEEcCCCccCHHHHHHHHHHH
Confidence 444555444221 1 1111 1135777654 223333322 11 134678888887764
No 39
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=28.14 E-value=14 Score=29.60 Aligned_cols=75 Identities=15% Similarity=0.150 Sum_probs=46.6
Q ss_pred ccEEEEEcCCCCeEEEeCCCCCeeEEEEEe-------cHHHHHHHHHHHHHhcccccCCceEEEEehhhHHhh----hcC
Q 024182 82 TAVYTVSNSSNEFVLISDPNGAKSIGLLCF-------RQEDAEAFLAQVRLRRKELRSAAKVVPITLDQVYML----KVE 150 (271)
Q Consensus 82 VPVF~Vtn~~g~pvli~~~~g~~~v~~~F~-------s~~DA~a~L~~lk~~~P~~~~~~kV~~vsL~~vy~l----k~~ 150 (271)
+|=|.++|.+|+.+..++-.|. .+.++|+ +..+... |+++..+.. ..++.|..|+.|....+ +..
T Consensus 31 aP~f~l~~~~G~~v~l~d~~Gk-~vvl~f~~~~~c~~C~~el~~-l~~l~~~~~--~~~~~vv~Vs~D~~~~~~~~~~~~ 106 (179)
T 3ixr_A 31 LLNHPLMLSGSTCKTLSDYTNQ-WLVLYFYPKDNTPGSSTEGLE-FNLLLPQFE--QINATVLGVSRDSVKSHDSFCAKQ 106 (179)
T ss_dssp HHHCCEEEGGGEEECGGGGTTS-EEEEEECSCTTSHHHHHHHHH-HHHHHHHHH--TTTEEEEEEESCCHHHHHHHHHHH
T ss_pred CCCeeEECCCCCEEeHHHHCCC-CEEEEEEcCCCCCchHHHHHH-HHHHHHHHH--HCCCEEEEEcCCCHHHHHHHHHHc
Confidence 6778899999998877665554 4555555 2333322 233322221 24688999999876555 235
Q ss_pred CeeEEEecCH
Q 024182 151 GIAFRFLPDP 160 (271)
Q Consensus 151 ~i~f~fvP~~ 160 (271)
++.|.++.|.
T Consensus 107 ~~~f~~l~D~ 116 (179)
T 3ixr_A 107 GFTFPLVSDS 116 (179)
T ss_dssp TCCSCEEECT
T ss_pred CCceEEEECC
Confidence 6778888774
No 40
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=27.24 E-value=92 Score=23.05 Aligned_cols=118 Identities=14% Similarity=0.026 Sum_probs=61.0
Q ss_pred CccEEEEEcCCCCeEEEeCCCCCeeEEEEEec------HHHHHHHHHH---HHHhcccccCCceEEEEehhhHHhh----
Q 024182 81 GTAVYTVSNSSNEFVLISDPNGAKSIGLLCFR------QEDAEAFLAQ---VRLRRKELRSAAKVVPITLDQVYML---- 147 (271)
Q Consensus 81 ~VPVF~Vtn~~g~pvli~~~~g~~~v~~~F~s------~~DA~a~L~~---lk~~~P~~~~~~kV~~vsL~~vy~l---- 147 (271)
..|-|.++|.+|..+..+.-.| +.+.+.|.. +.+... |.+ +.....+ .++.|..|+.+.-.+.
T Consensus 10 ~ap~f~l~~~~g~~~~l~~~~g-k~vll~F~a~wC~~C~~~~~~-l~~~~~l~~~~~~--~~~~vi~i~~d~~~~~~~~~ 85 (142)
T 3eur_A 10 KALNFTYTLDSGVKGTLYQFPA-EYTLLFINNPGCHACAEMIEG-LKASPVINGFTAA--KKLKVLSIYPDEELDEWKKH 85 (142)
T ss_dssp BCCCCEEEETTSCEEETTTCCC-SEEEEEECCSSSHHHHHHHHH-HHHCHHHHHHHHT--TSEEEEEEECSSCHHHHHHH
T ss_pred ccCCcEEEcCCCCEeeHHHcCC-CEEEEEEECCCCccHHHHHHH-HhhhHHHHHHhcc--CCeEEEEEEcCCCHHHHHHH
Confidence 4688999999999987766555 545545542 233222 333 3333222 4688888888754322
Q ss_pred -hcCCeeEEEecCHHHHHHHHHhhhhccCCCCCCceEEeccceeEeeCCeEEeeeeecHHHHHHHHH
Q 024182 148 -KVEGIAFRFLPDPAQIRNALELKAADVRTGFDGVPVFQSELLVVKKKNKRYCPVYFQKEDIEKELS 213 (271)
Q Consensus 148 -k~~~i~f~fvP~~~qv~~A~~L~~~~~~~~f~GVPVF~~~~Lti~~~~~~~~PvFFskeDl~~~l~ 213 (271)
+..++.|...-+.... ..+.+ .-...|+|-++ .+.++|+ ++--....++++..|+
T Consensus 86 ~~~~~~~~~~~~d~~~~---~~~~~---~~~v~~~P~~~----lid~~G~-i~~~~~~~~~l~~~l~ 141 (142)
T 3eur_A 86 RNDFAKEWTNGYDKELV---IKNKN---LYDLRAIPTLY----LLDKNKT-VLLKDATLQKVEQYLA 141 (142)
T ss_dssp GGGSCTTSEEEECTTCH---HHHTT---CSCCTTCSEEE----EECTTCB-EEEEEECHHHHHHHHH
T ss_pred HHhcccccccccCccch---hhhhh---hcCCCcCCeEE----EECCCCc-EEecCCCHHHHHHHHh
Confidence 2233344334343322 11111 11135788654 2333333 2223446788887765
No 41
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=26.90 E-value=53 Score=25.14 Aligned_cols=129 Identities=13% Similarity=-0.010 Sum_probs=65.1
Q ss_pred cEEEEEcCCCCeEEEeCCCCCeeEEEEEe-------cHHHHHHHHHHHHHhccc--ccCCceEEEEehhh----HHhh--
Q 024182 83 AVYTVSNSSNEFVLISDPNGAKSIGLLCF-------RQEDAEAFLAQVRLRRKE--LRSAAKVVPITLDQ----VYML-- 147 (271)
Q Consensus 83 PVF~Vtn~~g~pvli~~~~g~~~v~~~F~-------s~~DA~a~L~~lk~~~P~--~~~~~kV~~vsL~~----vy~l-- 147 (271)
|-|+++|.+|..+..+.-.| +.+...|. ++.... .|+++.++..+ ...+++|..|+.+. .-.+
T Consensus 7 p~f~l~~~~G~~~~l~~~~g-k~vll~F~~~~C~~~C~~~~~-~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~ 84 (171)
T 2rli_A 7 GDFHLLDHRGRARCKADFRG-QWVLMYFGFTHCPDICPDELE-KLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMAR 84 (171)
T ss_dssp SCCEEEETTSCEEETTTTTT-SEEEEEEECTTCSSSHHHHHH-HHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHH
T ss_pred CCeEEEeCCCCEEeHHHhCC-CEEEEEEEcCCCCchhHHHHH-HHHHHHHHHhhccCCCceEEEEEEECCCCCCHHHHHH
Confidence 77999999999988866555 44444443 333332 33333332221 12478899999873 1112
Q ss_pred --hcCCeeEEEecCHH-HHHHHHHhhhhccCCCCCCceEE----------ec-cceeEeeCCeEE--eeeeecHHHHHHH
Q 024182 148 --KVEGIAFRFLPDPA-QIRNALELKAADVRTGFDGVPVF----------QS-ELLVVKKKNKRY--CPVYFQKEDIEKE 211 (271)
Q Consensus 148 --k~~~i~f~fvP~~~-qv~~A~~L~~~~~~~~f~GVPVF----------~~-~~Lti~~~~~~~--~PvFFskeDl~~~ 211 (271)
+..+..|.++.+.. +... +.+.=+ ..++|.. -. ..+.|.++|+.+ ..=..+.+++.+.
T Consensus 85 ~~~~~~~~~~~l~~~~~~~~~---~~~~~~---v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~ 158 (171)
T 2rli_A 85 YVQDFHPRLLGLTGSTKQVAQ---ASHSYR---VYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGRSRSAEQISDS 158 (171)
T ss_dssp HHHTTCTTCCEEECCHHHHHH---HHHHSC---CCCEECCCCSSCCCCEECCCEEEEECTTSCEEEEEESSCCHHHHHHH
T ss_pred HHHHcCCCeEEEeCCHHHHHH---HHHHhC---eEEEecCCCCCCCeEEeccceEEEECCCCeEEEEECCCCCHHHHHHH
Confidence 33456666665432 2222 211111 1233310 00 122334444322 1223678899998
Q ss_pred HHHHHHhc
Q 024182 212 LSKVSRAS 219 (271)
Q Consensus 212 l~~~kk~~ 219 (271)
++++.++.
T Consensus 159 l~~ll~~~ 166 (171)
T 2rli_A 159 VRRHMAAF 166 (171)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88877643
No 42
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=25.28 E-value=74 Score=23.64 Aligned_cols=124 Identities=11% Similarity=0.166 Sum_probs=64.5
Q ss_pred Ccc-EEEEEcCCCCeEEEeCCCCCeeEEEEEec------HHHHHHHHHHHHHhcccccCCceEEEEehhhHH----hh-h
Q 024182 81 GTA-VYTVSNSSNEFVLISDPNGAKSIGLLCFR------QEDAEAFLAQVRLRRKELRSAAKVVPITLDQVY----ML-K 148 (271)
Q Consensus 81 ~VP-VF~Vtn~~g~pvli~~~~g~~~v~~~F~s------~~DA~a~L~~lk~~~P~~~~~~kV~~vsL~~vy----~l-k 148 (271)
..| -|.++|.+|..+....-.| +.+..+|.. +.. ...++++.+..++ .+++|..|+.+.-- +. +
T Consensus 8 ~~p~~f~l~~~~g~~~~l~~~~g-k~~lv~f~~~~C~~C~~~-~~~l~~l~~~~~~--~~~~~v~v~~d~~~~~~~~~~~ 83 (152)
T 2lja_A 8 PSAASFSYPDINGKTVSLADLKG-KYIYIDVWATWCGPCRGE-LPALKELEEKYAG--KDIHFVSLSCDKNKKAWENMVT 83 (152)
T ss_dssp CCSSSCEEEETTTEEEESTTTTT-SEEEEEECCSSCCGGGGT-HHHHHHHHHHSTT--SSEEEEEEECCSCHHHHHHHHH
T ss_pred CCCcccEeecCCCCEeeHHHcCC-CEEEEEEECCcCHhHHHH-hHHHHHHHHHhcc--CCeEEEEEEccCcHHHHHHHHH
Confidence 467 8999999999887765554 445445542 222 3345555554432 45888888776422 11 1
Q ss_pred cCCee-EEEecCHHHHHHHHHhhhhccCCCCCCceEEeccceeEeeCCeEEe--eeeecHHHHHHHHHHHHHhcC
Q 024182 149 VEGIA-FRFLPDPAQIRNALELKAADVRTGFDGVPVFQSELLVVKKKNKRYC--PVYFQKEDIEKELSKVSRASR 220 (271)
Q Consensus 149 ~~~i~-f~fvP~~~qv~~A~~L~~~~~~~~f~GVPVF~~~~Lti~~~~~~~~--PvFFskeDl~~~l~~~kk~~p 220 (271)
..++. +.+..+.. - .+.+. =...|+|.++ .+.++|+.+- .=+.+.+++.+.++++...++
T Consensus 84 ~~~~~~~~~~~d~~-~----~~~~~---~~v~~~P~~~----lid~~G~i~~~~~g~~~~~~l~~~l~~~~~~~~ 146 (152)
T 2lja_A 84 KDQLKGIQLHMGTD-R----TFMDA---YLINGIPRFI----LLDRDGKIISANMTRPSDPKTAEKFNELLGLEG 146 (152)
T ss_dssp HHTCCSEEEECSSC-T----HHHHH---TTCCSSCCEE----EECTTSCEEESSCCCTTCHHHHHHHHHHHTCCS
T ss_pred hcCCCCceeecCcc-h----hHHHH---cCcCCCCEEE----EECCCCeEEEccCCCCCHHHHHHHHHHHhcccc
Confidence 11211 22332221 0 11111 1134788654 2233333211 124678999999998877654
No 43
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=25.13 E-value=29 Score=28.43 Aligned_cols=78 Identities=12% Similarity=0.102 Sum_probs=47.8
Q ss_pred CCccEEEEEcC--CC-CeEEEeC-CCCCeeEEEEEe-------cHH-HHHHHHHHHHHhcccccCCce-EEEEehhhHHh
Q 024182 80 AGTAVYTVSNS--SN-EFVLISD-PNGAKSIGLLCF-------RQE-DAEAFLAQVRLRRKELRSAAK-VVPITLDQVYM 146 (271)
Q Consensus 80 ~~VPVF~Vtn~--~g-~pvli~~-~~g~~~v~~~F~-------s~~-DA~a~L~~lk~~~P~~~~~~k-V~~vsL~~vy~ 146 (271)
+..|-|++.+. +| +.+-.++ -.|.. +.++|+ +.. ++..+.+..++-. ..++. |..|+.+....
T Consensus 30 ~~aPdf~l~~~~~~G~~~v~L~d~~~Gk~-vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~---~~gv~~vv~Is~d~~~~ 105 (184)
T 3uma_A 30 DKLPNATFKEKTADGPVEVTTELLFKGKR-VVLFAVPGAFTPTCSLNHLPGYLENRDAIL---ARGVDDIAVVAVNDLHV 105 (184)
T ss_dssp CBCCCCEEEEEETTEEEEEEHHHHHTTSE-EEEEEESCTTCHHHHHTHHHHHHHTHHHHH---TTTCCEEEEEESSCHHH
T ss_pred CCCCCcEeecccCCCceEEeHHHHhCCCC-EEEEEEcCCCCCCcCHHHHHHHHHHHHHHH---HcCCCEEEEEECCCHHH
Confidence 34678888886 77 7776655 34543 444544 344 4554433332211 14677 99999998776
Q ss_pred hh----cCCee--EEEecCHH
Q 024182 147 LK----VEGIA--FRFLPDPA 161 (271)
Q Consensus 147 lk----~~~i~--f~fvP~~~ 161 (271)
++ ..++. |.++.|..
T Consensus 106 ~~~f~~~~~~~~~fp~l~D~~ 126 (184)
T 3uma_A 106 MGAWATHSGGMGKIHFLSDWN 126 (184)
T ss_dssp HHHHHHHHTCTTTSEEEECTT
T ss_pred HHHHHHHhCCCCceEEEEcCc
Confidence 62 35666 89998864
No 44
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=24.74 E-value=57 Score=25.04 Aligned_cols=60 Identities=12% Similarity=0.149 Sum_probs=36.2
Q ss_pred CccEEEEEcCCCCeEEEeCCCCCeeEEEEEe-------cHHHHHHHHHHHHHhcccccCCceEEEEehh
Q 024182 81 GTAVYTVSNSSNEFVLISDPNGAKSIGLLCF-------RQEDAEAFLAQVRLRRKELRSAAKVVPITLD 142 (271)
Q Consensus 81 ~VPVF~Vtn~~g~pvli~~~~g~~~v~~~F~-------s~~DA~a~L~~lk~~~P~~~~~~kV~~vsL~ 142 (271)
.+|-|+++|.+|..+..+.-.| +.+.+.|+ ++.. ...|.++.+...+.+.+++|..|+.+
T Consensus 12 ~~p~f~l~~~~G~~~~l~~~~g-k~vll~f~~~~C~~~C~~~-~~~l~~l~~~~~~~~~~~~vv~is~d 78 (174)
T 1xzo_A 12 EVEPFTFQNQDGKNVSLESLKG-EVWLADFIFTNCETICPPM-TAHMTDLQKKLKAENIDVRIISFSVD 78 (174)
T ss_dssp ECCCCEEECTTSCEEETGGGTT-CCEEEEEECSCCSSCCCSH-HHHHHHHHHHHHHTTCCCEEEEEESC
T ss_pred ccCCcEEEcCCCCEEehhhcCC-CEEEEEEEcCCCcchhHHH-HHHHHHHHHHhhhcCCcEEEEEEEeC
Confidence 4688999999999888766555 43444443 2222 22344444433332235899999986
No 45
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=24.36 E-value=1.2e+02 Score=23.69 Aligned_cols=59 Identities=12% Similarity=0.082 Sum_probs=36.4
Q ss_pred CCccEEEEEcCCCCeEEEeCCCCCeeEEEEEe------cHHHHHHHHHHHHHhcccccCCceEEEEehh
Q 024182 80 AGTAVYTVSNSSNEFVLISDPNGAKSIGLLCF------RQEDAEAFLAQVRLRRKELRSAAKVVPITLD 142 (271)
Q Consensus 80 ~~VPVF~Vtn~~g~pvli~~~~g~~~v~~~F~------s~~DA~a~L~~lk~~~P~~~~~~kV~~vsL~ 142 (271)
..+|=|+++|.+|..+..+.-.| +.+...|. ++.+.. .|+++.++..+ .++.|..|+.+
T Consensus 16 ~~~p~f~l~d~~G~~v~l~~~~G-k~vlv~F~atwC~~C~~~~p-~l~~l~~~~~~--~~~~vi~is~d 80 (180)
T 3kij_A 16 NSFYAFEVKDAKGRTVSLEKYKG-KVSLVVNVASDCQLTDRNYL-GLKELHKEFGP--SHFSVLAFPCN 80 (180)
T ss_dssp CCGGGCEEEBTTSCEEEGGGGTT-SEEEEEEECSSSTTHHHHHH-HHHHHHHHHTT--TSEEEEEEECC
T ss_pred CcccceEEecCCCCEecHHHcCC-CEEEEEEEecCCCCcHHHHH-HHHHHHHHhcc--CCeEEEEEECC
Confidence 35788999999999988866555 44444443 344433 34445443332 35888888754
No 46
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=23.76 E-value=1.6e+02 Score=22.15 Aligned_cols=78 Identities=14% Similarity=0.209 Sum_probs=49.0
Q ss_pred CCccEEEEEcCCCCeEEEeCCCCCeeEEEEEecH-----HHHHHHHHHHHHhcccccCCceEEEEehhhHHhh--hcCCe
Q 024182 80 AGTAVYTVSNSSNEFVLISDPNGAKSIGLLCFRQ-----EDAEAFLAQVRLRRKELRSAAKVVPITLDQVYML--KVEGI 152 (271)
Q Consensus 80 ~~VPVF~Vtn~~g~pvli~~~~g~~~v~~~F~s~-----~DA~a~L~~lk~~~P~~~~~~kV~~vsL~~vy~l--k~~~i 152 (271)
..+|-|.++|.+|..+..+.-.| +.+.+.|+.. ......|.++.++.++ .++.|..|+.+.-++- +..++
T Consensus 19 ~~~p~f~l~~~~g~~~~l~~~~g-k~vll~F~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~v~v~~d~~~~~~~~~~~~ 95 (158)
T 3hdc_A 19 ALAPNFKLPTLSGENKSLAQYRG-KIVLVNFWASWCPYCRDEMPSMDRLVKSFPK--GDLVVLAVNVEKRFPEKYRRAPV 95 (158)
T ss_dssp SBCCCCEEECTTSCEEESGGGTT-SEEEEEEECTTCHHHHHHHHHHHHHHHHSST--TSEEEEEEECSSSCCGGGGGCCC
T ss_pred CcCCCceeEcCCCCEEehHHhCC-CEEEEEEECCcCHHHHHHHHHHHHHHHHccc--CCeEEEEEeCCHHHHHHHHHcCC
Confidence 46788999999999888766555 4455555521 2223344555554443 5788999998873322 33566
Q ss_pred eEEEecCH
Q 024182 153 AFRFLPDP 160 (271)
Q Consensus 153 ~f~fvP~~ 160 (271)
.|.++-+.
T Consensus 96 ~~~~~~d~ 103 (158)
T 3hdc_A 96 SFNFLSDA 103 (158)
T ss_dssp SCEEEECT
T ss_pred CceEEECc
Confidence 77777665
No 47
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=22.44 E-value=1.5e+02 Score=21.90 Aligned_cols=124 Identities=13% Similarity=0.209 Sum_probs=63.5
Q ss_pred CccEEEEEcCCCCeEEEeCCCCCeeEEEEEecH-----HHHHHHHHHHHHhcccccCCceEEEEehhhH----Hhh-hcC
Q 024182 81 GTAVYTVSNSSNEFVLISDPNGAKSIGLLCFRQ-----EDAEAFLAQVRLRRKELRSAAKVVPITLDQV----YML-KVE 150 (271)
Q Consensus 81 ~VPVF~Vtn~~g~pvli~~~~g~~~v~~~F~s~-----~DA~a~L~~lk~~~P~~~~~~kV~~vsL~~v----y~l-k~~ 150 (271)
..|-|.++|.+|..+..+.-.| +.+...|+.. ......|.++.+..++ .+++|..|+.+.- -+. +..
T Consensus 5 ~~p~~~l~~~~g~~~~l~~~~g-k~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~--~~v~vv~v~~d~~~~~~~~~~~~~ 81 (151)
T 2f9s_A 5 DAPNFVLEDTNGKRIELSDLKG-KGVFLNFWGTWCEPCKKEFPYMANQYKHFKS--QGVEIVAVNVGESKIAVHNFMKSY 81 (151)
T ss_dssp ECCCCEEECTTCCEEEGGGGTT-SEEEEEEECTTCHHHHHHHHHHHHHHHHHGG--GTEEEEEEEESCCHHHHHHHHHHH
T ss_pred cCCcceeEcCCCCEEEHHHcCC-CEEEEEEECCCCHHHHHHHHHHHHHHHHhcc--CCeEEEEEECCCCHHHHHHHHHHc
Confidence 3688999999999888766555 4454455421 1222334444443332 3588888877531 111 223
Q ss_pred CeeEEEecCHHHHHHHHHhhhhccCCCCCCceEEeccceeEeeCCeEEe--eeeecHHHHHHHHHHHHHhc
Q 024182 151 GIAFRFLPDPAQIRNALELKAADVRTGFDGVPVFQSELLVVKKKNKRYC--PVYFQKEDIEKELSKVSRAS 219 (271)
Q Consensus 151 ~i~f~fvP~~~qv~~A~~L~~~~~~~~f~GVPVF~~~~Lti~~~~~~~~--PvFFskeDl~~~l~~~kk~~ 219 (271)
++.|.++-+... .+.+. -+..|+|-++ .+.++|+.+. .=+.+.+++.+.++++.+..
T Consensus 82 ~~~~~~~~d~~~-----~~~~~---~~v~~~P~~~----lid~~G~i~~~~~G~~~~~~l~~~l~~ll~~~ 140 (151)
T 2f9s_A 82 GVNFPVVLDTDR-----QVLDA---YDVSPLPTTF----LINPEGKVVKVVTGTMTESMIHDYMNLIKPGE 140 (151)
T ss_dssp TCCSCEEEETTS-----HHHHH---TTCCSSCEEE----EECTTSEEEEEEESCCCHHHHHHHHHHHSCC-
T ss_pred CCCceEEECCch-----HHHHh---cCCCCCCeEE----EECCCCcEEEEEeCCCCHHHHHHHHHHHHhhh
Confidence 344444433211 11111 1135788643 2223333211 11348899999999886543
No 48
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=22.30 E-value=1.5e+02 Score=21.05 Aligned_cols=119 Identities=11% Similarity=0.127 Sum_probs=61.8
Q ss_pred CccEEEEEcCCCCeEEEeCCCCCeeEEEEEecH-----HHHHHHHHHHHHhcccccCCceEEEEehhhH----Hhh-hcC
Q 024182 81 GTAVYTVSNSSNEFVLISDPNGAKSIGLLCFRQ-----EDAEAFLAQVRLRRKELRSAAKVVPITLDQV----YML-KVE 150 (271)
Q Consensus 81 ~VPVF~Vtn~~g~pvli~~~~g~~~v~~~F~s~-----~DA~a~L~~lk~~~P~~~~~~kV~~vsL~~v----y~l-k~~ 150 (271)
..|-|.+++.+|+.+....-.| +.+...|++. ......++++.+.. . ++++..|+.+.- -+. +..
T Consensus 4 ~~p~~~~~~~~g~~~~l~~~~~-k~~ll~f~~~~C~~C~~~~~~l~~~~~~~---~-~~~~~~v~~~~~~~~~~~~~~~~ 78 (136)
T 1zzo_A 4 AQLQFSAKTLDGHDFHGESLLG-KPAVLWFWAPWCPTCQGEAPVVGQVAASH---P-EVTFVGVAGLDQVPAMQEFVNKY 78 (136)
T ss_dssp GGGCCEEEBTTSCEEEGGGGTT-SCEEEEEECTTCHHHHHHHHHHHHHHHHC---T-TSEEEEEECSSCHHHHHHHHHHT
T ss_pred CCCCcccccCCCCEeeHHHhCC-CeEEEEEEcCCChhHHHHHHHHHHHHHHc---C-CeEEEEEeCCCCHHHHHHHHHHc
Confidence 4688999999999888765554 4455555532 22233444444433 3 688888887531 111 223
Q ss_pred Ce-eEEEecCHHHHHHHHHhhhhccCCCCCCceEEeccceeEeeCCeEE-eeeeecHHHHHHHHHHHH
Q 024182 151 GI-AFRFLPDPAQIRNALELKAADVRTGFDGVPVFQSELLVVKKKNKRY-CPVYFQKEDIEKELSKVS 216 (271)
Q Consensus 151 ~i-~f~fvP~~~qv~~A~~L~~~~~~~~f~GVPVF~~~~Lti~~~~~~~-~PvFFskeDl~~~l~~~k 216 (271)
++ .|.++-+... .+.+. -+..|+|.++ .+.++|+.+ ..=+.+.+++.+.++++.
T Consensus 79 ~~~~~~~~~d~~~-----~~~~~---~~i~~~P~~~----~id~~g~i~~~~g~~~~~~l~~~l~~~l 134 (136)
T 1zzo_A 79 PVKTFTQLADTDG-----SVWAN---FGVTQQPAYA----FVDPHGNVDVVRGRMSQDELTRRVTALT 134 (136)
T ss_dssp TCTTSEEEECTTC-----HHHHH---TTCCSSSEEE----EECTTCCEEEEESCCCHHHHHHHHHHHC
T ss_pred CCCceEEEEcCCc-----HHHHH---cCCCCCceEE----EECCCCCEEEEecCCCHHHHHHHHHHHh
Confidence 33 4444433211 11111 1135788653 223333322 222357888888887764
No 49
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=21.77 E-value=1.6e+02 Score=22.82 Aligned_cols=60 Identities=15% Similarity=0.183 Sum_probs=37.0
Q ss_pred CCccEEEEEcCCCCeEEEeCCCCCeeEEEEEec------HHHHHHHHHHHHHhcccccCCceEEEEehhh
Q 024182 80 AGTAVYTVSNSSNEFVLISDPNGAKSIGLLCFR------QEDAEAFLAQVRLRRKELRSAAKVVPITLDQ 143 (271)
Q Consensus 80 ~~VPVF~Vtn~~g~pvli~~~~g~~~v~~~F~s------~~DA~a~L~~lk~~~P~~~~~~kV~~vsL~~ 143 (271)
...|-|.++|.+|..+..+.-.| +.+.+.|.. +.... .|+++.+... ..+++|..|+.+.
T Consensus 38 ~~~p~f~l~~~~G~~~~l~~~~g-k~vll~F~a~~C~~C~~~~~-~l~~l~~~~~--~~~~~vv~v~~d~ 103 (186)
T 1jfu_A 38 LKLPDLAFEDADGKPKKLSDFRG-KTLLVNLWATWCVPCRKEMP-ALDELQGKLS--GPNFEVVAINIDT 103 (186)
T ss_dssp CBCCCCEEECTTSCEEEGGGGTT-SEEEEEEECTTCHHHHHHHH-HHHHHHHHHC--BTTEEEEEEECCC
T ss_pred CcCCCcEeEcCCCCEeeHHHcCC-CEEEEEEEeCCCHhHHHHHH-HHHHHHHHhc--cCCcEEEEEECCC
Confidence 35788999999999888766555 445444542 22222 2344444322 1578899998874
No 50
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=21.61 E-value=1.6e+02 Score=21.43 Aligned_cols=121 Identities=11% Similarity=0.037 Sum_probs=63.1
Q ss_pred CccEEEEEcCCCCeEEEeCCCCCeeEEEEEecH--HHHHHH---HHH---HHHhcccccCCceEEEEehhhHHh----h-
Q 024182 81 GTAVYTVSNSSNEFVLISDPNGAKSIGLLCFRQ--EDAEAF---LAQ---VRLRRKELRSAAKVVPITLDQVYM----L- 147 (271)
Q Consensus 81 ~VPVF~Vtn~~g~pvli~~~~g~~~v~~~F~s~--~DA~a~---L~~---lk~~~P~~~~~~kV~~vsL~~vy~----l- 147 (271)
..|-|.++|.+|..+..+.-.| +.+...|... ..-.+. |.+ +.+...+ .++.|..|+++.--+ .
T Consensus 6 ~~p~f~l~~~~g~~~~l~~~~g-k~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~--~~~~~v~v~~d~~~~~~~~~~ 82 (142)
T 3ewl_A 6 KAADFTYVTVHGDNSRMSRLKA-QYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVEN--GTLRVLAIYPDENREEWATKA 82 (142)
T ss_dssp BCCCCEEECTTCCEEEGGGCCC-SEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHH--TSEEEEEEECSSCHHHHHHHH
T ss_pred cCCCCEEECCCCCEEEhhhcCC-CEEEEEEECCCCccHHHHHHHHHHhHHHHHHhcc--CCeEEEEEEecCCHHHHHHHH
Confidence 4788999999999988876555 4454445421 112222 222 3332222 458888888773111 1
Q ss_pred hcCCeeEEEecCHHHHHHHHHhhhhccCCCCCCceEEeccceeEeeCCeEEeeeeecHHHHHHHHHHH
Q 024182 148 KVEGIAFRFLPDPAQIRNALELKAADVRTGFDGVPVFQSELLVVKKKNKRYCPVYFQKEDIEKELSKV 215 (271)
Q Consensus 148 k~~~i~f~fvP~~~qv~~A~~L~~~~~~~~f~GVPVF~~~~Lti~~~~~~~~PvFFskeDl~~~l~~~ 215 (271)
+..++.|.++-+...--. . . ..=...|+|-++ .+.++|+.+ --..+.+++++.+++.
T Consensus 83 ~~~~~~~~~~~d~~~~~~-~--~---~~~~v~~~P~~~----lid~~G~i~-~~~~~~~~l~~~l~~~ 139 (142)
T 3ewl_A 83 VYMPQGWIVGWNKAGDIR-T--R---QLYDIRATPTIY----LLDGRKRVI-LKDTSMEQLIDYLATQ 139 (142)
T ss_dssp TTSCTTCEEEECTTCHHH-H--T---TCSCCCSSSEEE----EECTTCBEE-ECSCCHHHHHHHHHC-
T ss_pred HHcCCCcceeeCCccchh-h--H---HHcCCCCCCeEE----EECCCCCEE-ecCCCHHHHHHHHHHH
Confidence 334566666655432111 0 0 011135788543 233333322 2346888888887755
No 51
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=21.40 E-value=1.4e+02 Score=21.63 Aligned_cols=57 Identities=14% Similarity=0.141 Sum_probs=29.0
Q ss_pred CCeeEEEecCHHHHHHHHHhhhhccCCCCCCceEE-eccceeEeeCCeEEeeeeecHHHHHHHHHHHHH
Q 024182 150 EGIAFRFLPDPAQIRNALELKAADVRTGFDGVPVF-QSELLVVKKKNKRYCPVYFQKEDIEKELSKVSR 217 (271)
Q Consensus 150 ~~i~f~fvP~~~qv~~A~~L~~~~~~~~f~GVPVF-~~~~Lti~~~~~~~~PvFFskeDl~~~l~~~kk 217 (271)
.++.|..+--.+.-+.+..+.+.+ .+...||+. +.++ ..+ +=|+.+++.+.|.++..
T Consensus 27 ~gi~y~~idi~~d~~~~~~~~~~~--~G~~tVP~I~i~Dg-------~~l--~~~~~~el~~~L~el~g 84 (92)
T 2lqo_A 27 NRIAYDEVDIEHNRAAAEFVGSVN--GGNRTVPTVKFADG-------STL--TNPSADEVKAKLVKIAG 84 (92)
T ss_dssp TTCCCEEEETTTCHHHHHHHHHHS--SSSSCSCEEEETTS-------CEE--ESCCHHHHHHHHHHHHC
T ss_pred cCCceEEEEcCCCHHHHHHHHHHc--CCCCEeCEEEEeCC-------EEE--eCCCHHHHHHHHHHhcC
Confidence 344555443333333333344332 123489964 4432 211 12688999988887753
No 52
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=21.06 E-value=1.2e+02 Score=24.93 Aligned_cols=127 Identities=12% Similarity=0.107 Sum_probs=65.5
Q ss_pred CccEEEEE---cCCCCeEEEeCCCCCeeEEEEEe-------cHHHHHHHHHHHHHhcccccCCceEEEEehhhHHhhh--
Q 024182 81 GTAVYTVS---NSSNEFVLISDPNGAKSIGLLCF-------RQEDAEAFLAQVRLRRKELRSAAKVVPITLDQVYMLK-- 148 (271)
Q Consensus 81 ~VPVF~Vt---n~~g~pvli~~~~g~~~v~~~F~-------s~~DA~a~L~~lk~~~P~~~~~~kV~~vsL~~vy~lk-- 148 (271)
..|-|.++ |.+|..+..++-.| +.+.++|+ ++.+... |+++..+..+ .+++|..|+.|....++
T Consensus 32 ~aP~f~l~~~~~~~g~~v~l~d~~G-k~vll~F~pa~~Cp~C~~~~~~-l~~l~~~~~~--~~v~vv~Is~D~~~~~~~~ 107 (220)
T 1zye_A 32 HAPYFKGTAVVSGEFKEISLDDFKG-KYLVLFFYPLDFTFVCPTEIIA-FSDKASEFHD--VNCEVVAVSVDSHFSHLAW 107 (220)
T ss_dssp BCCCCEEEEECSSSEEEEEGGGGTT-SEEEEEECSCTTCSSSHHHHHH-HHHHHHHHHH--TTEEEEEEESSCHHHHHHH
T ss_pred CCCCcEEEeeeCCCCcEEEHHHhCC-CeEEEEEECCCCCCCCHHHHHH-HHHHHHHHHH--CCCEEEEEECCCHHHHHHH
Confidence 36667765 46677777655455 54555555 2443333 2333332211 46899999998765441
Q ss_pred --c-------CCeeEEEecCHH-HHHHHHHhhhhccCCCCCCceEEeccceeEeeCCeEEe------eeeecHHHHHHHH
Q 024182 149 --V-------EGIAFRFLPDPA-QIRNALELKAADVRTGFDGVPVFQSELLVVKKKNKRYC------PVYFQKEDIEKEL 212 (271)
Q Consensus 149 --~-------~~i~f~fvP~~~-qv~~A~~L~~~~~~~~f~GVPVF~~~~Lti~~~~~~~~------PvFFskeDl~~~l 212 (271)
. +++.|.++-|.. ++..+..+... ..-.++|-++ .|.++++-+- +.--+.+++.+.+
T Consensus 108 ~~~~~~~~g~~~~~fp~l~D~~~~i~~~ygv~~~---~~g~~~P~~~----liD~~G~I~~~~~g~~~~~~~~~ell~~l 180 (220)
T 1zye_A 108 INTPRKNGGLGHMNIALLSDLTKQISRDYGVLLE---GPGLALRGLF----IIDPNGVIKHLSVNDLPVGRSVEETLRLV 180 (220)
T ss_dssp HTSCGGGTCCCSCSSEEEECTTSHHHHHTTCEET---TTTEECEEEE----EECTTSBEEEEEEECTTCCCCHHHHHHHH
T ss_pred HHHHHHhCCCcCCceEEEECCcHHHHHHhCCeec---CCCcccceEE----EECCCCEEEEEEecCCCCCCCHHHHHHHH
Confidence 1 167888888853 33332222210 1001466443 3333333111 1112458888888
Q ss_pred HHHHHh
Q 024182 213 SKVSRA 218 (271)
Q Consensus 213 ~~~kk~ 218 (271)
+++...
T Consensus 181 ~~l~~~ 186 (220)
T 1zye_A 181 KAFQFV 186 (220)
T ss_dssp HHHHHT
T ss_pred HHhhhh
Confidence 887653
No 53
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=21.02 E-value=1.6e+02 Score=22.16 Aligned_cols=58 Identities=10% Similarity=0.134 Sum_probs=36.0
Q ss_pred CccEEEEEcCCCCeEEEeCCCCCeeEEEEEe------cHHHHHHHHHHHHHhcccccCCceEEEEehh
Q 024182 81 GTAVYTVSNSSNEFVLISDPNGAKSIGLLCF------RQEDAEAFLAQVRLRRKELRSAAKVVPITLD 142 (271)
Q Consensus 81 ~VPVF~Vtn~~g~pvli~~~~g~~~v~~~F~------s~~DA~a~L~~lk~~~P~~~~~~kV~~vsL~ 142 (271)
.+|=|.++|.+|..+..+.-.| +.+...|. ++.+.. .|+++.++..+ .+++|..|+.+
T Consensus 10 ~~p~f~l~~~~G~~~~l~~~~g-k~vlv~f~a~~C~~C~~~~~-~l~~l~~~~~~--~~~~vv~v~~d 73 (169)
T 2v1m_A 10 SIYEFTVKDINGVDVSLEKYRG-HVCLIVNVACKCGATDKNYR-QLQEMHTRLVG--KGLRILAFPCN 73 (169)
T ss_dssp SGGGCEEEBTTSCEEEGGGGTT-SEEEEEEECSSSTTHHHHHH-HHHHHHHHHGG--GTEEEEEEECC
T ss_pred ccccceeecCCCCCccHHHcCC-CEEEEEEeeccCCchHHHHH-HHHHHHHHhhc--CCeEEEEEECC
Confidence 5788999999999988766555 44444444 233332 33444443322 35889888875
No 54
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=20.63 E-value=1.8e+02 Score=20.40 Aligned_cols=54 Identities=13% Similarity=0.101 Sum_probs=31.9
Q ss_pred ccEEEEEcCCCCeEEEeCCCCCeeEEEEEec---H--HHHHHHHHHHHHhcccccCCceEEEE
Q 024182 82 TAVYTVSNSSNEFVLISDPNGAKSIGLLCFR---Q--EDAEAFLAQVRLRRKELRSAAKVVPI 139 (271)
Q Consensus 82 VPVF~Vtn~~g~pvli~~~~g~~~v~~~F~s---~--~DA~a~L~~lk~~~P~~~~~~kV~~v 139 (271)
+|-|.++|.+|..+....-.| +.+...|+. . ......++++.+. ...+..+..+
T Consensus 2 ~p~f~l~~~~g~~~~l~~~~g-k~~lv~f~~~~C~~C~~~~~~l~~~~~~---~~~~~~~v~i 60 (138)
T 4evm_A 2 VADFELMGVDGKTYRLSDYKG-KKVYLKFWASWCSICLASLPDTDEIAKE---AGDDYVVLTV 60 (138)
T ss_dssp CCCCEEEBTTSCEEEGGGGTT-SEEEEEECCTTCHHHHHHHHHHHHHHHT---CTTTEEEEEE
T ss_pred CCcceeECCCCCEEEHHHhCC-CEEEEEEEcCcCHHHHHHHHHHHHHHHH---hCCCcEEEEE
Confidence 688999999999988866555 445444542 1 1222234444443 3346666666
Done!