Query 024185
Match_columns 271
No_of_seqs 497 out of 1365
Neff 11.4
Searched_HMMs 29240
Date Mon Mar 25 03:51:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024185.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024185hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ow8_A WD repeat-containing pr 100.0 4.1E-40 1.4E-44 262.1 31.4 233 13-258 50-286 (321)
2 3ow8_A WD repeat-containing pr 100.0 4E-40 1.4E-44 262.1 30.7 224 12-250 93-320 (321)
3 2ynn_A Coatomer subunit beta'; 100.0 7.3E-40 2.5E-44 258.8 31.9 238 9-259 23-267 (304)
4 4gqb_B Methylosome protein 50; 100.0 3.5E-40 1.2E-44 264.6 30.5 234 11-254 93-334 (344)
5 1got_B GT-beta; complex (GTP-b 100.0 2.1E-39 7.1E-44 260.1 32.5 230 9-248 107-340 (340)
6 1vyh_C Platelet-activating fac 100.0 4.8E-40 1.7E-44 270.2 29.4 236 8-258 117-376 (410)
7 1vyh_C Platelet-activating fac 100.0 2.6E-39 9E-44 265.8 29.4 227 9-250 160-410 (410)
8 2pbi_B Guanine nucleotide-bind 100.0 9.4E-38 3.2E-42 251.8 33.2 199 41-248 150-354 (354)
9 4gqb_B Methylosome protein 50; 100.0 1.2E-38 4E-43 255.8 25.8 204 44-257 81-295 (344)
10 4g56_B MGC81050 protein; prote 100.0 1E-38 3.5E-43 257.6 25.0 232 11-252 105-344 (357)
11 1got_B GT-beta; complex (GTP-b 100.0 1.8E-37 6E-42 248.9 28.9 211 37-255 47-261 (340)
12 2ynn_A Coatomer subunit beta'; 100.0 1.8E-36 6.1E-41 239.4 33.1 231 8-252 64-303 (304)
13 3iz6_a 40S ribosomal protein R 100.0 3.2E-37 1.1E-41 251.0 29.4 237 9-253 76-377 (380)
14 3frx_A Guanine nucleotide-bind 100.0 1.2E-36 4.2E-41 241.9 31.7 230 12-254 31-270 (319)
15 1erj_A Transcriptional repress 100.0 8.3E-37 2.8E-41 249.6 30.7 229 9-252 133-390 (393)
16 4ery_A WD repeat-containing pr 100.0 2.4E-36 8.3E-41 239.4 28.6 210 37-257 15-229 (312)
17 4ery_A WD repeat-containing pr 100.0 4.5E-36 1.5E-40 237.8 30.1 237 9-259 33-276 (312)
18 3frx_A Guanine nucleotide-bind 100.0 1.8E-36 6E-41 241.0 27.8 209 37-257 9-233 (319)
19 2pbi_B Guanine nucleotide-bind 100.0 2.9E-36 1E-40 243.0 28.7 211 37-254 56-274 (354)
20 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.7E-35 6E-40 237.7 32.7 236 9-253 26-285 (345)
21 2xzm_R RACK1; ribosome, transl 100.0 1.8E-35 6.1E-40 237.5 32.5 234 12-256 40-290 (343)
22 2hes_X YDR267CP; beta-propelle 100.0 1.3E-35 4.5E-40 237.0 30.9 230 13-252 26-281 (330)
23 2pm7_B Protein transport prote 100.0 9.2E-36 3.1E-40 234.6 29.0 232 9-251 19-285 (297)
24 4h5i_A Guanine nucleotide-exch 100.0 7.6E-36 2.6E-40 241.5 29.1 202 44-253 132-345 (365)
25 4g56_B MGC81050 protein; prote 100.0 4.1E-37 1.4E-41 248.2 21.3 229 20-258 69-308 (357)
26 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.2E-35 4E-40 238.8 29.3 238 9-257 71-341 (345)
27 2ymu_A WD-40 repeat protein; u 100.0 1.7E-35 5.7E-40 253.0 30.6 220 9-248 354-577 (577)
28 1nr0_A Actin interacting prote 100.0 4.4E-36 1.5E-40 258.4 26.5 230 9-256 28-275 (611)
29 1erj_A Transcriptional repress 100.0 2.8E-35 9.6E-40 240.6 29.7 199 47-257 125-347 (393)
30 2xzm_R RACK1; ribosome, transl 100.0 3.4E-35 1.2E-39 235.9 29.4 205 37-251 13-244 (343)
31 2pm7_B Protein transport prote 100.0 9.7E-36 3.3E-40 234.4 25.2 204 40-252 4-239 (297)
32 1nr0_A Actin interacting prote 100.0 2.1E-35 7.2E-40 254.1 28.4 233 9-256 69-360 (611)
33 2hes_X YDR267CP; beta-propelle 100.0 5.8E-35 2E-39 233.3 28.4 207 37-252 6-231 (330)
34 3iz6_a 40S ribosomal protein R 100.0 3.5E-36 1.2E-40 244.9 20.8 214 36-256 57-285 (380)
35 1k8k_C P40, ARP2/3 complex 41 100.0 1.3E-34 4.4E-39 234.4 29.4 234 9-251 18-274 (372)
36 3bg1_A Protein SEC13 homolog; 100.0 3.6E-35 1.2E-39 233.1 23.3 233 9-251 23-293 (316)
37 3vl1_A 26S proteasome regulato 100.0 6.1E-35 2.1E-39 240.2 25.3 232 9-254 66-325 (420)
38 4gga_A P55CDC, cell division c 100.0 7.3E-34 2.5E-38 234.2 31.3 232 12-257 117-401 (420)
39 3dm0_A Maltose-binding peripla 100.0 1.6E-34 5.3E-39 252.2 28.7 235 13-256 397-637 (694)
40 3dwl_C Actin-related protein 2 100.0 1.4E-35 4.8E-40 240.8 20.3 231 10-251 22-281 (377)
41 2j04_B YDR362CP, TAU91; beta p 100.0 2.6E-35 8.7E-40 247.8 22.2 225 19-252 181-429 (524)
42 3f3f_A Nucleoporin SEH1; struc 100.0 7.7E-34 2.6E-38 227.2 29.2 241 9-256 21-342 (351)
43 1sq9_A Antiviral protein SKI8; 100.0 5.5E-34 1.9E-38 232.8 28.0 231 12-253 82-397 (397)
44 3bg1_A Protein SEC13 homolog; 100.0 2.9E-35 9.9E-40 233.7 19.6 203 40-251 8-247 (316)
45 3jrp_A Fusion protein of prote 100.0 1.6E-33 5.6E-38 228.2 29.8 232 9-251 21-287 (379)
46 4e54_B DNA damage-binding prot 100.0 6.3E-35 2.2E-39 241.5 21.7 194 9-216 129-332 (435)
47 3zwl_B Eukaryotic translation 100.0 2.9E-33 1E-37 225.8 30.9 232 9-255 42-350 (369)
48 2ymu_A WD-40 repeat protein; u 100.0 3.4E-33 1.2E-37 238.7 31.8 223 9-251 313-539 (577)
49 3dwl_C Actin-related protein 2 100.0 1.9E-35 6.7E-40 240.0 17.0 205 41-254 7-239 (377)
50 1gxr_A ESG1, transducin-like e 100.0 9.4E-33 3.2E-37 220.3 32.1 232 12-256 63-301 (337)
51 4ggc_A P55CDC, cell division c 100.0 5.6E-33 1.9E-37 220.1 30.1 230 14-253 38-317 (318)
52 1sq9_A Antiviral protein SKI8; 100.0 6.1E-34 2.1E-38 232.5 25.2 240 12-259 27-330 (397)
53 3vl1_A 26S proteasome regulato 100.0 7.7E-34 2.6E-38 233.7 25.8 229 9-253 107-367 (420)
54 2pm9_A Protein WEB1, protein t 100.0 4.1E-34 1.4E-38 234.8 23.3 238 9-257 77-343 (416)
55 1r5m_A SIR4-interacting protei 100.0 5.3E-33 1.8E-37 228.4 29.8 225 9-250 118-424 (425)
56 4aez_A CDC20, WD repeat-contai 100.0 6.4E-33 2.2E-37 227.2 29.9 232 9-258 144-387 (401)
57 3k26_A Polycomb protein EED; W 100.0 1.7E-34 5.9E-39 232.9 20.3 227 12-251 86-366 (366)
58 3mkq_A Coatomer beta'-subunit; 100.0 2.2E-33 7.6E-38 248.8 29.2 238 8-258 22-266 (814)
59 1gxr_A ESG1, transducin-like e 100.0 1.7E-32 5.9E-37 218.8 31.3 225 9-249 107-335 (337)
60 2aq5_A Coronin-1A; WD40 repeat 100.0 1.2E-33 4.3E-38 231.4 24.8 227 18-254 54-302 (402)
61 3dm0_A Maltose-binding peripla 100.0 7.9E-33 2.7E-37 241.5 30.3 226 9-251 440-693 (694)
62 3dw8_B Serine/threonine-protei 100.0 2.9E-33 9.9E-38 231.9 25.1 239 9-255 38-377 (447)
63 3k26_A Polycomb protein EED; W 100.0 3E-33 1E-37 225.6 24.4 231 11-255 34-322 (366)
64 3ei3_B DNA damage-binding prot 100.0 1.3E-32 4.5E-37 223.8 28.1 229 12-251 132-382 (383)
65 4aow_A Guanine nucleotide-bind 100.0 4.3E-32 1.5E-36 217.0 30.5 233 9-252 48-287 (340)
66 3jrp_A Fusion protein of prote 100.0 2.2E-33 7.4E-38 227.5 23.1 206 39-253 5-242 (379)
67 3ei3_B DNA damage-binding prot 100.0 7.6E-33 2.6E-37 225.3 26.3 211 36-257 64-288 (383)
68 3v7d_B Cell division control p 100.0 4.9E-32 1.7E-36 225.8 31.5 228 12-255 133-385 (464)
69 4a11_B DNA excision repair pro 100.0 6.4E-32 2.2E-36 220.9 31.2 238 10-258 55-372 (408)
70 1k8k_C P40, ARP2/3 complex 41 100.0 3.1E-33 1.1E-37 226.3 23.1 209 41-258 4-240 (372)
71 3i2n_A WD repeat-containing pr 100.0 1.3E-33 4.5E-38 227.1 20.6 227 12-253 81-355 (357)
72 3zwl_B Eukaryotic translation 100.0 1.5E-32 5.2E-37 221.6 26.7 212 37-258 24-256 (369)
73 2xyi_A Probable histone-bindin 100.0 4.9E-33 1.7E-37 229.9 24.3 242 13-262 143-421 (430)
74 4aez_A CDC20, WD repeat-contai 100.0 1.9E-32 6.5E-37 224.4 26.9 226 12-254 104-339 (401)
75 4e54_B DNA damage-binding prot 100.0 5.7E-34 1.9E-38 235.8 17.5 206 41-255 115-331 (435)
76 3v7d_B Cell division control p 100.0 1E-31 3.5E-36 223.9 31.1 228 12-257 174-427 (464)
77 3gre_A Serine/threonine-protei 100.0 9.1E-33 3.1E-37 228.6 24.6 235 10-258 75-366 (437)
78 3dw8_B Serine/threonine-protei 100.0 1.1E-32 3.7E-37 228.5 23.5 208 43-258 26-323 (447)
79 3jro_A Fusion protein of prote 100.0 2E-32 6.8E-37 240.6 26.5 233 9-252 19-286 (753)
80 1r5m_A SIR4-interacting protei 100.0 1.2E-31 4.1E-36 220.3 28.8 236 9-253 55-363 (425)
81 4aow_A Guanine nucleotide-bind 100.0 1E-31 3.5E-36 214.7 27.6 211 37-258 30-253 (340)
82 2pm9_A Protein WEB1, protein t 100.0 1.5E-33 5.3E-38 231.4 16.7 232 11-252 126-415 (416)
83 3odt_A Protein DOA1; ubiquitin 100.0 1.8E-31 6.2E-36 210.8 27.5 231 9-259 69-304 (313)
84 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.3E-31 4.4E-36 222.6 27.8 199 44-249 101-337 (450)
85 2w18_A PALB2, fancn, partner a 100.0 2.4E-31 8.4E-36 207.7 27.3 172 70-249 155-355 (356)
86 3sfz_A APAF-1, apoptotic pepti 100.0 1.9E-31 6.4E-36 246.2 31.4 230 9-251 625-913 (1249)
87 3odt_A Protein DOA1; ubiquitin 100.0 3.6E-31 1.2E-35 209.1 28.4 227 9-258 27-262 (313)
88 4gq1_A NUP37; propeller, trans 100.0 3.9E-32 1.3E-36 222.0 23.1 234 13-251 103-389 (393)
89 3f3f_A Nucleoporin SEH1; struc 100.0 6E-32 2.1E-36 216.2 23.4 211 39-254 5-252 (351)
90 1pgu_A Actin interacting prote 100.0 1.2E-31 4.2E-36 230.4 26.6 234 12-258 31-290 (615)
91 1yfq_A Cell cycle arrest prote 100.0 9.3E-32 3.2E-36 215.3 24.0 236 9-259 21-290 (342)
92 3i2n_A WD repeat-containing pr 100.0 3.5E-31 1.2E-35 212.9 27.5 233 9-255 28-295 (357)
93 2aq5_A Coronin-1A; WD40 repeat 100.0 2.3E-32 7.8E-37 223.9 20.6 235 10-254 93-345 (402)
94 1p22_A F-BOX/WD-repeat protein 100.0 8.9E-31 3E-35 216.7 28.4 223 11-253 143-367 (435)
95 3mmy_A MRNA export factor; mRN 100.0 6.1E-31 2.1E-35 212.2 26.2 221 12-241 55-334 (368)
96 3jro_A Fusion protein of prote 100.0 6.9E-32 2.3E-36 237.3 22.1 206 39-253 3-240 (753)
97 2j04_B YDR362CP, TAU91; beta p 100.0 2.3E-32 7.9E-37 229.9 18.0 229 13-253 227-519 (524)
98 3gre_A Serine/threonine-protei 100.0 6.5E-31 2.2E-35 217.5 26.4 230 9-248 121-437 (437)
99 3mmy_A MRNA export factor; mRN 100.0 2.7E-31 9.4E-36 214.2 23.1 214 36-259 30-312 (368)
100 2oaj_A Protein SNI1; WD40 repe 100.0 1.6E-31 5.5E-36 238.4 23.2 200 42-255 14-246 (902)
101 3lrv_A PRE-mRNA-splicing facto 100.0 1.5E-31 5.1E-36 214.7 20.7 197 52-257 43-250 (343)
102 3sfz_A APAF-1, apoptotic pepti 100.0 5.1E-32 1.7E-36 249.9 19.9 234 9-259 971-1215(1249)
103 3mkq_A Coatomer beta'-subunit; 100.0 5.6E-30 1.9E-34 227.0 31.7 232 8-254 64-305 (814)
104 3lrv_A PRE-mRNA-splicing facto 100.0 3.2E-31 1.1E-35 212.7 21.5 221 12-253 49-294 (343)
105 1p22_A F-BOX/WD-repeat protein 100.0 1.3E-30 4.4E-35 215.7 25.3 224 12-258 184-421 (435)
106 3vu4_A KMHSV2; beta-propeller 100.0 1E-30 3.5E-35 210.7 23.9 201 40-253 14-273 (355)
107 4a11_B DNA excision repair pro 100.0 2.7E-30 9.1E-35 211.3 25.4 206 39-256 37-281 (408)
108 1pgu_A Actin interacting prote 100.0 2.4E-30 8.2E-35 222.4 26.2 225 9-251 307-614 (615)
109 2ovr_B FBW7, F-BOX/WD repeat p 100.0 8.6E-30 3E-34 211.3 28.4 225 11-258 129-355 (445)
110 2xyi_A Probable histone-bindin 100.0 1.4E-30 4.9E-35 215.1 23.5 206 39-251 122-353 (430)
111 2ovr_B FBW7, F-BOX/WD repeat p 100.0 5.9E-29 2E-33 206.3 30.5 222 12-252 210-443 (445)
112 2j04_A TAU60, YPL007P, hypothe 100.0 8.4E-30 2.9E-34 211.1 23.1 192 43-250 83-296 (588)
113 1yfq_A Cell cycle arrest prote 100.0 2.5E-29 8.6E-34 201.1 24.8 223 9-248 66-321 (342)
114 2oaj_A Protein SNI1; WD40 repe 100.0 3.1E-29 1.1E-33 223.7 27.3 229 9-249 27-310 (902)
115 4h5i_A Guanine nucleotide-exch 100.0 1.1E-28 3.7E-33 199.6 27.7 210 40-257 68-306 (365)
116 2vdu_B TRNA (guanine-N(7)-)-me 100.0 9.5E-29 3.3E-33 205.4 27.4 228 9-251 112-391 (450)
117 1l0q_A Surface layer protein; 100.0 2.1E-27 7.3E-32 193.5 30.3 229 11-257 43-281 (391)
118 2j04_A TAU60, YPL007P, hypothe 100.0 2.3E-29 8E-34 208.4 18.6 191 41-254 48-257 (588)
119 1l0q_A Surface layer protein; 100.0 2.4E-27 8.3E-32 193.2 30.0 222 17-256 8-238 (391)
120 3vu4_A KMHSV2; beta-propeller 100.0 4.1E-28 1.4E-32 195.5 24.9 220 16-253 76-338 (355)
121 3bws_A Protein LP49; two-domai 100.0 9.4E-27 3.2E-31 192.2 29.9 226 9-251 178-432 (433)
122 2w18_A PALB2, fancn, partner a 100.0 9.5E-28 3.2E-32 187.5 21.7 176 20-209 156-355 (356)
123 4gq1_A NUP37; propeller, trans 100.0 3.7E-28 1.3E-32 198.4 18.7 197 52-257 96-354 (393)
124 3bws_A Protein LP49; two-domai 100.0 2.1E-26 7.1E-31 190.1 26.9 233 11-257 133-396 (433)
125 4gga_A P55CDC, cell division c 100.0 1.2E-26 4.1E-31 191.1 24.3 196 48-258 108-317 (420)
126 2hqs_A Protein TOLB; TOLB, PAL 100.0 4.3E-26 1.5E-30 187.4 26.9 223 11-254 143-390 (415)
127 4ggc_A P55CDC, cell division c 100.0 3.9E-26 1.3E-30 180.7 23.3 202 48-259 28-281 (318)
128 2oit_A Nucleoporin 214KDA; NH2 99.9 2E-25 6.7E-30 184.2 18.2 200 45-253 36-280 (434)
129 2hqs_A Protein TOLB; TOLB, PAL 99.9 3.8E-24 1.3E-28 175.8 23.7 217 22-255 94-348 (415)
130 1pby_B Quinohemoprotein amine 99.9 3.9E-23 1.3E-27 164.6 26.8 229 13-259 3-318 (337)
131 2ojh_A Uncharacterized protein 99.9 3.6E-23 1.2E-27 161.6 24.3 216 19-254 20-261 (297)
132 3vgz_A Uncharacterized protein 99.9 8.1E-23 2.8E-27 164.0 26.9 224 20-258 68-310 (353)
133 3u4y_A Uncharacterized protein 99.9 1.8E-22 6.1E-27 160.8 25.5 223 17-254 16-255 (331)
134 3u4y_A Uncharacterized protein 99.9 1.4E-22 4.7E-27 161.4 24.7 232 12-254 52-307 (331)
135 1jmx_B Amine dehydrogenase; ox 99.9 5.8E-23 2E-27 164.5 22.4 234 10-259 9-333 (349)
136 1ri6_A Putative isomerase YBHE 99.9 9.6E-22 3.3E-26 156.9 28.4 232 12-253 50-312 (343)
137 3hfq_A Uncharacterized protein 99.9 1.9E-21 6.4E-26 156.0 30.1 227 20-255 62-323 (347)
138 1xfd_A DIP, dipeptidyl aminope 99.9 8E-24 2.7E-28 185.4 17.4 200 47-255 18-293 (723)
139 1nir_A Nitrite reductase; hemo 99.9 5.2E-22 1.8E-26 168.0 27.4 223 13-251 150-402 (543)
140 1ri6_A Putative isomerase YBHE 99.9 1.7E-21 5.7E-26 155.6 26.0 231 9-250 2-261 (343)
141 1nir_A Nitrite reductase; hemo 99.9 2.4E-21 8.1E-26 164.1 28.0 233 9-255 188-462 (543)
142 2ecf_A Dipeptidyl peptidase IV 99.9 1.5E-22 5E-27 177.9 21.4 198 45-255 36-325 (741)
143 3vgz_A Uncharacterized protein 99.9 2E-21 6.9E-26 155.8 26.0 203 46-258 41-269 (353)
144 2ojh_A Uncharacterized protein 99.9 1.7E-22 5.9E-27 157.7 18.7 214 12-241 54-290 (297)
145 2z3z_A Dipeptidyl aminopeptida 99.9 3.9E-22 1.3E-26 174.3 23.0 229 12-254 93-394 (706)
146 1xfd_A DIP, dipeptidyl aminope 99.9 2.1E-22 7.3E-27 176.4 18.2 226 13-253 29-347 (723)
147 2ecf_A Dipeptidyl peptidase IV 99.9 2E-22 7E-27 177.0 17.7 226 9-250 46-366 (741)
148 2oit_A Nucleoporin 214KDA; NH2 99.9 1E-21 3.6E-26 162.0 19.7 197 44-250 91-332 (434)
149 1k32_A Tricorn protease; prote 99.9 6.1E-21 2.1E-25 173.4 22.1 191 45-251 295-502 (1045)
150 3scy_A Hypothetical bacterial 99.9 5.7E-19 2E-23 142.3 31.1 228 21-256 75-344 (361)
151 2z3z_A Dipeptidyl aminopeptida 99.9 4.4E-21 1.5E-25 167.7 20.1 193 46-250 82-341 (706)
152 3o4h_A Acylamino-acid-releasin 99.9 3.5E-21 1.2E-25 164.9 19.0 221 8-249 30-274 (582)
153 1pby_B Quinohemoprotein amine 99.9 2.8E-20 9.6E-25 148.1 22.7 185 65-256 4-274 (337)
154 1jof_A Carboxy-CIS,CIS-muconat 99.9 9E-20 3.1E-24 147.3 25.0 202 48-252 85-342 (365)
155 1jmx_B Amine dehydrogenase; ox 99.9 9.2E-21 3.2E-25 151.7 18.5 192 50-256 4-289 (349)
156 3o4h_A Acylamino-acid-releasin 99.9 2.7E-20 9.2E-25 159.3 22.4 183 50-251 114-315 (582)
157 3hfq_A Uncharacterized protein 99.9 5.6E-19 1.9E-23 141.5 28.1 201 44-250 38-270 (347)
158 1z68_A Fibroblast activation p 99.9 1.1E-21 3.9E-26 171.8 13.4 195 50-256 20-296 (719)
159 1z68_A Fibroblast activation p 99.9 1E-21 3.5E-26 172.1 12.7 225 13-253 28-348 (719)
160 1k32_A Tricorn protease; prote 99.9 2.7E-20 9.3E-25 169.2 22.1 195 41-253 241-463 (1045)
161 4a5s_A Dipeptidyl peptidase 4 99.9 3.9E-20 1.3E-24 162.6 19.6 192 48-253 19-296 (740)
162 1jof_A Carboxy-CIS,CIS-muconat 99.8 3.1E-18 1.1E-22 138.3 27.6 201 46-254 40-295 (365)
163 3scy_A Hypothetical bacterial 99.8 1.4E-17 4.8E-22 134.2 28.8 199 44-250 48-290 (361)
164 3pe7_A Oligogalacturonate lyas 99.8 5.5E-18 1.9E-22 137.7 23.1 203 39-254 24-276 (388)
165 1q7f_A NHL, brain tumor CG1071 99.8 1E-16 3.5E-21 124.9 29.0 226 12-253 41-282 (286)
166 4a5s_A Dipeptidyl peptidase 4 99.8 4.9E-19 1.7E-23 155.6 16.6 228 13-255 29-357 (740)
167 2oiz_A Aromatic amine dehydrog 99.8 3.5E-17 1.2E-21 131.9 24.3 224 20-257 30-342 (361)
168 3pe7_A Oligogalacturonate lyas 99.8 6.2E-18 2.1E-22 137.3 19.6 231 9-254 45-332 (388)
169 3fvz_A Peptidyl-glycine alpha- 99.8 5.1E-17 1.7E-21 129.4 23.7 216 22-251 70-322 (329)
170 3azo_A Aminopeptidase; POP fam 99.8 2.9E-17 9.9E-22 142.6 22.4 233 9-254 88-372 (662)
171 3e5z_A Putative gluconolactona 99.8 7.1E-16 2.4E-20 120.8 27.3 221 14-257 42-292 (296)
172 3azo_A Aminopeptidase; POP fam 99.8 2.8E-17 9.5E-22 142.7 19.9 201 41-254 19-277 (662)
173 3c5m_A Oligogalacturonate lyas 99.8 2.4E-17 8.2E-22 134.1 17.0 228 10-255 46-333 (396)
174 3c5m_A Oligogalacturonate lyas 99.8 6.3E-16 2.2E-20 125.7 24.2 232 9-255 90-388 (396)
175 3fvz_A Peptidyl-glycine alpha- 99.7 4.7E-16 1.6E-20 123.8 21.5 205 44-258 22-284 (329)
176 1q7f_A NHL, brain tumor CG1071 99.7 2.2E-15 7.5E-20 117.4 24.6 195 44-251 28-238 (286)
177 2xdw_A Prolyl endopeptidase; a 99.7 4.8E-16 1.6E-20 136.1 22.5 208 44-254 123-371 (710)
178 3dsm_A Uncharacterized protein 99.7 3.1E-15 1E-19 119.0 24.6 226 12-258 54-308 (328)
179 3no2_A Uncharacterized protein 99.7 1.5E-15 5.1E-20 117.7 22.2 184 65-258 8-202 (276)
180 1rwi_B Serine/threonine-protei 99.7 2.6E-15 9E-20 115.8 23.3 226 12-254 35-267 (270)
181 2xdw_A Prolyl endopeptidase; a 99.7 2.1E-15 7.2E-20 132.0 25.0 231 9-253 134-416 (710)
182 2oiz_A Aromatic amine dehydrog 99.7 6.7E-15 2.3E-19 118.5 25.3 179 47-235 109-360 (361)
183 3e5z_A Putative gluconolactona 99.7 1.2E-15 4.1E-20 119.5 20.3 200 41-251 23-246 (296)
184 3no2_A Uncharacterized protein 99.7 6.5E-15 2.2E-19 114.1 23.3 211 12-241 6-231 (276)
185 3dsm_A Uncharacterized protein 99.7 9E-15 3.1E-19 116.3 24.4 219 20-255 16-257 (328)
186 2bkl_A Prolyl endopeptidase; m 99.7 4.3E-15 1.5E-19 129.7 23.4 202 43-249 118-347 (695)
187 2gop_A Trilobed protease; beta 99.7 2.5E-15 8.6E-20 120.2 20.2 183 46-253 59-293 (347)
188 1xip_A Nucleoporin NUP159; bet 99.7 1.9E-15 6.5E-20 121.4 19.3 172 46-240 38-231 (388)
189 2dg1_A DRP35, lactonase; beta 99.7 1.2E-13 4E-18 109.9 27.0 200 41-251 40-263 (333)
190 2dg1_A DRP35, lactonase; beta 99.7 1.2E-14 4E-19 115.7 21.0 193 46-251 6-213 (333)
191 2gop_A Trilobed protease; beta 99.7 2.8E-14 9.4E-19 114.1 21.3 179 48-250 106-330 (347)
192 1qks_A Cytochrome CD1 nitrite 99.7 4.6E-13 1.6E-17 113.5 28.8 219 18-251 174-421 (567)
193 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 2.5E-13 8.6E-18 106.9 24.8 221 18-251 43-299 (314)
194 1rwi_B Serine/threonine-protei 99.6 1.2E-13 4.2E-18 106.4 21.7 196 47-254 25-225 (270)
195 1qks_A Cytochrome CD1 nitrite 99.6 1.5E-13 5E-18 116.5 23.5 187 65-257 170-379 (567)
196 2mad_H Methylamine dehydrogena 99.6 1.1E-12 3.9E-17 105.8 27.5 222 22-257 48-356 (373)
197 2bkl_A Prolyl endopeptidase; m 99.6 2.8E-14 9.5E-19 124.6 19.5 227 9-254 130-400 (695)
198 2z2n_A Virginiamycin B lyase; 99.6 5.2E-12 1.8E-16 98.5 29.8 224 12-253 68-297 (299)
199 3sjl_D Methylamine dehydrogena 99.6 2.4E-13 8.2E-18 108.9 21.8 237 9-259 42-371 (386)
200 2z2n_A Virginiamycin B lyase; 99.6 9.2E-12 3.1E-16 97.1 29.5 221 12-250 26-254 (299)
201 1yr2_A Prolyl oligopeptidase; 99.6 2.8E-13 9.5E-18 119.1 21.9 199 46-249 163-391 (741)
202 3c75_H MADH, methylamine dehyd 99.6 7.5E-13 2.6E-17 107.8 21.5 229 21-258 99-409 (426)
203 3g4e_A Regucalcin; six bladed 99.6 4.1E-12 1.4E-16 99.5 24.8 211 11-240 24-259 (297)
204 3hrp_A Uncharacterized protein 99.6 1.4E-11 4.7E-16 100.8 27.3 221 12-249 142-408 (409)
205 3iuj_A Prolyl endopeptidase; h 99.5 6.9E-13 2.4E-17 115.7 20.6 204 44-253 127-361 (693)
206 1yr2_A Prolyl oligopeptidase; 99.5 1.7E-12 5.8E-17 114.1 23.1 230 9-254 172-444 (741)
207 3g4e_A Regucalcin; six bladed 99.5 2.9E-12 9.8E-17 100.4 22.0 202 45-259 12-237 (297)
208 3hrp_A Uncharacterized protein 99.5 5.8E-12 2E-16 103.0 23.4 199 47-254 132-357 (409)
209 2qc5_A Streptogramin B lactona 99.5 1.3E-10 4.3E-15 90.6 30.1 221 12-250 31-259 (300)
210 1pjx_A Dfpase, DIISOPROPYLFLUO 99.5 1.5E-11 5E-16 96.7 24.3 196 47-256 19-261 (314)
211 2ghs_A AGR_C_1268P; regucalcin 99.5 7.9E-11 2.7E-15 93.4 27.3 208 12-240 61-289 (326)
212 1xip_A Nucleoporin NUP159; bet 99.5 3.5E-13 1.2E-17 108.3 13.6 148 91-254 38-194 (388)
213 2ghs_A AGR_C_1268P; regucalcin 99.5 3.7E-11 1.3E-15 95.3 24.7 194 47-254 50-262 (326)
214 3dr2_A Exported gluconolactona 99.5 7E-11 2.4E-15 92.8 26.0 217 9-248 54-303 (305)
215 2qc5_A Streptogramin B lactona 99.5 3.6E-10 1.2E-14 88.0 28.1 221 12-249 73-298 (300)
216 2ece_A 462AA long hypothetical 99.5 1.6E-11 5.6E-16 99.2 19.7 216 18-241 103-399 (462)
217 3sjl_D Methylamine dehydrogena 99.4 1.4E-11 4.9E-16 98.7 19.0 192 51-253 38-258 (386)
218 2iwa_A Glutamine cyclotransfer 99.4 6.3E-11 2.2E-15 90.1 21.2 204 37-252 11-238 (266)
219 3dr2_A Exported gluconolactona 99.4 1.9E-11 6.6E-16 96.0 18.7 196 43-252 42-268 (305)
220 1mda_H Methylamine dehydrogena 99.4 8.7E-12 3E-16 99.9 16.7 221 22-259 47-354 (368)
221 2hz6_A Endoplasmic reticulum t 99.4 7.7E-14 2.6E-18 112.6 4.6 217 12-252 10-237 (369)
222 2hz6_A Endoplasmic reticulum t 99.4 1.7E-14 5.9E-19 116.4 0.7 178 65-255 12-196 (369)
223 1kb0_A Quinohemoprotein alcoho 99.4 1.1E-10 3.8E-15 101.3 21.6 236 12-259 129-515 (677)
224 2qe8_A Uncharacterized protein 99.4 1.5E-10 5.1E-15 92.5 20.3 187 44-241 65-309 (343)
225 3nol_A Glutamine cyclotransfer 99.4 4.6E-10 1.6E-14 84.5 21.4 192 36-241 32-243 (262)
226 1yiq_A Quinohemoprotein alcoho 99.3 6.4E-10 2.2E-14 96.8 23.0 234 12-259 122-513 (689)
227 2ece_A 462AA long hypothetical 99.3 6.4E-10 2.2E-14 90.0 21.2 189 55-250 93-351 (462)
228 1fwx_A Nitrous oxide reductase 99.3 3.4E-10 1.2E-14 94.7 19.0 179 69-254 172-434 (595)
229 3iuj_A Prolyl endopeptidase; h 99.3 7.8E-10 2.7E-14 96.5 22.2 226 9-254 138-408 (693)
230 2mad_H Methylamine dehydrogena 99.3 2.4E-09 8.3E-14 86.3 23.0 170 73-252 48-244 (373)
231 2qe8_A Uncharacterized protein 99.3 3.5E-10 1.2E-14 90.3 17.9 199 46-253 17-280 (343)
232 3nok_A Glutaminyl cyclase; bet 99.3 2.1E-09 7.3E-14 80.9 19.5 191 36-241 44-253 (268)
233 3hxj_A Pyrrolo-quinoline quino 99.2 1.9E-09 6.6E-14 85.2 19.9 216 11-252 107-325 (330)
234 1npe_A Nidogen, entactin; glyc 99.2 1.3E-07 4.3E-12 72.6 29.2 201 46-258 36-245 (267)
235 3mbr_X Glutamine cyclotransfer 99.2 1.2E-08 3.9E-13 76.3 22.0 192 36-241 10-222 (243)
236 3c75_H MADH, methylamine dehyd 99.2 8.9E-10 3.1E-14 89.8 17.0 163 49-218 180-409 (426)
237 3hxj_A Pyrrolo-quinoline quino 99.2 1.9E-09 6.4E-14 85.3 16.9 212 11-251 30-244 (330)
238 1yiq_A Quinohemoprotein alcoho 99.1 9.9E-09 3.4E-13 89.4 21.5 161 73-238 276-533 (689)
239 1kb0_A Quinohemoprotein alcoho 99.1 8.6E-09 2.9E-13 89.6 21.0 161 73-238 284-535 (677)
240 1fwx_A Nitrous oxide reductase 99.1 3.3E-09 1.1E-13 88.8 17.4 188 50-251 89-361 (595)
241 3q7m_A Lipoprotein YFGL, BAMB; 99.1 8.4E-08 2.9E-12 77.4 24.1 171 65-248 191-375 (376)
242 1npe_A Nidogen, entactin; glyc 99.1 7E-07 2.4E-11 68.4 27.0 177 46-235 79-263 (267)
243 3q7m_A Lipoprotein YFGL, BAMB; 99.1 3.4E-08 1.2E-12 79.7 20.3 223 12-255 54-300 (376)
244 2iwa_A Glutamine cyclotransfer 99.1 6.5E-08 2.2E-12 73.6 20.2 168 82-259 9-189 (266)
245 1kv9_A Type II quinohemoprotei 99.1 6E-08 2E-12 84.2 22.4 234 12-259 118-496 (668)
246 1mda_H Methylamine dehydrogena 99.0 4.2E-09 1.4E-13 84.4 13.4 87 142-232 269-366 (368)
247 3nol_A Glutamine cyclotransfer 99.0 6.4E-08 2.2E-12 72.9 18.4 165 84-260 33-210 (262)
248 3nok_A Glutaminyl cyclase; bet 99.0 8.5E-08 2.9E-12 72.3 17.7 164 83-259 44-218 (268)
249 3qqz_A Putative uncharacterize 99.0 1.4E-06 4.7E-11 65.9 23.9 205 39-249 20-251 (255)
250 2ad6_A Methanol dehydrogenase 99.0 2.8E-07 9.5E-12 78.5 22.1 236 12-259 116-502 (571)
251 2xe4_A Oligopeptidase B; hydro 98.9 9.4E-08 3.2E-12 84.2 19.2 198 47-249 175-398 (751)
252 2fp8_A Strictosidine synthase; 98.9 6.2E-07 2.1E-11 70.7 21.6 192 48-250 21-268 (322)
253 1w6s_A Methanol dehydrogenase 98.9 1.2E-06 4E-11 74.9 23.4 234 14-259 124-511 (599)
254 3mbr_X Glutamine cyclotransfer 98.9 8.3E-07 2.8E-11 66.3 19.4 152 96-259 26-187 (243)
255 1flg_A Protein (quinoprotein e 98.9 1.9E-06 6.6E-11 73.5 24.0 236 12-259 118-524 (582)
256 2fp8_A Strictosidine synthase; 98.8 3.1E-06 1.1E-10 66.7 22.0 189 47-252 81-314 (322)
257 3v65_B Low-density lipoprotein 98.8 2.5E-05 8.5E-10 63.2 27.3 200 46-256 116-323 (386)
258 1ijq_A LDL receptor, low-densi 98.8 1.8E-05 6.3E-10 62.1 25.4 180 70-252 8-196 (316)
259 4a2l_A BT_4663, two-component 98.8 2.8E-05 9.4E-10 69.1 29.3 198 45-254 262-483 (795)
260 4a2l_A BT_4663, two-component 98.8 1.6E-05 5.3E-10 70.6 27.4 227 12-255 321-575 (795)
261 1kv9_A Type II quinohemoprotei 98.7 2.4E-06 8.2E-11 74.2 20.9 164 73-241 271-520 (668)
262 3amr_A 3-phytase; beta-propell 98.7 5.4E-06 1.8E-10 65.2 20.6 200 50-258 30-271 (355)
263 3v64_C Agrin; beta propeller, 98.7 5E-05 1.7E-09 60.5 28.9 199 46-255 73-279 (349)
264 2p4o_A Hypothetical protein; p 98.7 6.5E-06 2.2E-10 64.4 21.0 210 12-241 43-276 (306)
265 2ad6_A Methanol dehydrogenase 98.7 4.6E-06 1.6E-10 71.0 20.9 164 72-240 272-524 (571)
266 3v64_C Agrin; beta propeller, 98.7 2.1E-05 7.3E-10 62.7 23.4 176 70-252 51-235 (349)
267 2p4o_A Hypothetical protein; p 98.7 2.2E-05 7.5E-10 61.4 23.1 193 46-250 32-241 (306)
268 3sov_A LRP-6, low-density lipo 98.6 7.5E-05 2.6E-09 58.7 27.5 228 14-256 7-243 (318)
269 3v65_B Low-density lipoprotein 98.6 1.8E-05 6.2E-10 64.0 21.8 177 70-252 94-278 (386)
270 3p5b_L Low density lipoprotein 98.6 5.2E-05 1.8E-09 61.6 24.3 183 69-253 89-279 (400)
271 2xe4_A Oligopeptidase B; hydro 98.6 3.6E-06 1.2E-10 74.2 18.7 151 94-251 177-354 (751)
272 1ijq_A LDL receptor, low-densi 98.6 9.2E-05 3.2E-09 58.1 28.5 226 14-256 4-243 (316)
273 3tc9_A Hypothetical hydrolase; 98.6 7.3E-06 2.5E-10 67.3 18.3 149 94-251 140-301 (430)
274 3p5b_L Low density lipoprotein 98.6 0.00015 5E-09 59.0 25.6 226 15-256 86-325 (400)
275 3v9f_A Two-component system se 98.6 7E-05 2.4E-09 66.3 25.5 227 12-254 374-614 (781)
276 3v9f_A Two-component system se 98.6 9.4E-05 3.2E-09 65.5 26.0 230 12-255 324-572 (781)
277 1w6s_A Methanol dehydrogenase 98.5 2.7E-05 9.1E-10 66.5 20.9 163 72-239 278-533 (599)
278 1flg_A Protein (quinoprotein e 98.5 1.8E-05 6.1E-10 67.5 19.4 164 72-240 291-547 (582)
279 4hw6_A Hypothetical protein, I 98.5 4.5E-05 1.5E-09 62.7 19.8 191 48-249 141-372 (433)
280 3tc9_A Hypothetical hydrolase; 98.4 7.8E-05 2.7E-09 61.2 21.1 153 48-210 139-300 (430)
281 3m0c_C LDL receptor, low-densi 98.4 0.00047 1.6E-08 60.8 27.0 199 45-255 423-636 (791)
282 1k3i_A Galactose oxidase precu 98.4 5.7E-05 1.9E-09 65.5 20.2 185 51-241 248-529 (656)
283 3sov_A LRP-6, low-density lipo 98.3 0.00024 8.3E-09 55.8 20.6 179 69-252 10-198 (318)
284 3m0c_C LDL receptor, low-densi 98.3 0.00055 1.9E-08 60.4 23.8 182 71-254 403-592 (791)
285 2p9w_A MAL S 1 allergenic prot 98.3 0.00012 4.1E-09 57.1 17.2 155 93-251 15-215 (334)
286 4hw6_A Hypothetical protein, I 98.3 0.00016 5.4E-09 59.4 18.5 148 94-250 142-303 (433)
287 2p9w_A MAL S 1 allergenic prot 98.3 0.00075 2.6E-08 52.7 21.1 195 49-251 16-265 (334)
288 3amr_A 3-phytase; beta-propell 98.2 0.0012 3.9E-08 52.1 23.1 195 14-218 42-271 (355)
289 3qqz_A Putative uncharacterize 98.2 0.00072 2.4E-08 51.1 19.5 156 93-252 29-205 (255)
290 3s94_A LRP-6, low-density lipo 98.1 0.0027 9.1E-08 54.6 24.6 199 45-255 39-247 (619)
291 1n7d_A LDL receptor, low-densi 98.1 1.2E-05 4.2E-10 70.1 10.0 177 70-252 384-572 (699)
292 3kya_A Putative phosphatase; s 98.1 0.00027 9.4E-09 58.6 17.4 149 95-250 143-340 (496)
293 3kya_A Putative phosphatase; s 98.1 0.0021 7.2E-08 53.3 21.9 158 48-210 141-340 (496)
294 1n7d_A LDL receptor, low-densi 98.1 4E-05 1.4E-09 66.9 11.7 175 48-231 455-634 (699)
295 2xbg_A YCF48-like protein; pho 98.0 0.0028 9.6E-08 49.9 25.2 189 46-249 122-320 (327)
296 4a0p_A LRP6, LRP-6, low-densit 98.0 0.0055 1.9E-07 52.8 29.8 226 13-255 8-241 (628)
297 2vpj_A Kelch-like protein 12; 98.0 0.0028 9.5E-08 49.1 20.1 181 65-253 66-280 (301)
298 4a0p_A LRP6, LRP-6, low-densit 98.0 0.0061 2.1E-07 52.5 23.4 178 69-253 12-199 (628)
299 3sre_A PON1, serum paraoxonase 97.9 0.0013 4.4E-08 52.2 17.3 154 93-251 52-252 (355)
300 3pbp_A Nucleoporin NUP82; beta 97.9 0.0018 6.1E-08 52.2 17.7 137 69-207 38-208 (452)
301 3ii7_A Kelch-like protein 7; p 97.9 0.0034 1.2E-07 48.7 19.2 181 65-253 59-274 (306)
302 4asc_A Kelch repeat and BTB do 97.9 0.0051 1.7E-07 48.0 20.0 217 20-253 12-279 (315)
303 1k3i_A Galactose oxidase precu 97.9 0.0019 6.6E-08 56.0 19.0 120 95-216 190-328 (656)
304 2xzh_A Clathrin heavy chain 1; 97.9 0.0056 1.9E-07 47.6 25.5 225 13-254 79-335 (365)
305 3ei3_A DNA damage-binding prot 97.9 0.018 6E-07 53.2 26.2 229 12-254 618-916 (1158)
306 1zgk_A Kelch-like ECH-associat 97.8 0.0038 1.3E-07 48.5 17.9 173 72-253 90-289 (308)
307 3pbp_A Nucleoporin NUP82; beta 97.8 0.01 3.5E-07 47.9 20.6 147 97-248 27-209 (452)
308 3das_A Putative oxidoreductase 97.7 0.005 1.7E-07 48.7 16.9 144 92-240 33-219 (347)
309 3sre_A PON1, serum paraoxonase 97.7 0.013 4.3E-07 46.6 22.2 175 70-250 81-297 (355)
310 2xn4_A Kelch-like protein 2; s 97.7 0.011 3.8E-07 45.7 21.2 181 65-253 65-278 (302)
311 1cru_A Protein (soluble quinop 97.6 0.012 4E-07 48.6 19.1 105 92-199 28-162 (454)
312 3a9g_A Putative uncharacterize 97.6 0.0055 1.9E-07 48.8 15.8 143 93-241 31-216 (354)
313 2ism_A Putative oxidoreductase 97.6 0.0041 1.4E-07 49.5 14.9 144 92-240 32-220 (352)
314 3ii7_A Kelch-like protein 7; p 97.5 0.011 3.6E-07 45.9 16.6 175 71-253 23-227 (306)
315 2vpj_A Kelch-like protein 12; 97.5 0.019 6.6E-07 44.3 19.5 174 72-253 31-233 (301)
316 2woz_A Kelch repeat and BTB do 97.5 0.021 7.2E-07 44.5 20.2 171 74-253 80-289 (318)
317 1bpo_A Protein (clathrin); cla 97.5 0.028 9.5E-07 45.6 28.9 225 13-254 78-334 (494)
318 2ism_A Putative oxidoreductase 97.5 0.025 8.5E-07 45.0 21.8 218 12-241 42-333 (352)
319 2g8s_A Glucose/sorbosone dehyd 97.4 0.012 4E-07 46.9 16.1 147 92-240 19-215 (353)
320 1tl2_A L10, protein (tachylect 97.4 0.022 7.4E-07 41.7 15.3 145 92-243 42-202 (236)
321 3s25_A Hypothetical 7-bladed b 97.3 0.033 1.1E-06 43.2 19.1 159 71-252 87-256 (302)
322 2uvk_A YJHT; unknown function, 97.2 0.046 1.6E-06 43.3 17.5 142 112-259 168-350 (357)
323 2xbg_A YCF48-like protein; pho 97.2 0.05 1.7E-06 42.7 24.1 190 45-253 79-280 (327)
324 2xn4_A Kelch-like protein 2; s 97.1 0.056 1.9E-06 41.7 18.2 173 72-253 30-231 (302)
325 1zgk_A Kelch-like ECH-associat 97.1 0.037 1.3E-06 42.9 15.7 173 72-253 39-242 (308)
326 2be1_A Serine/threonine-protei 97.1 0.00045 1.5E-08 54.4 4.3 109 65-177 13-140 (339)
327 3s94_A LRP-6, low-density lipo 97.1 0.12 4.2E-06 44.4 29.1 194 47-252 350-552 (619)
328 4asc_A Kelch repeat and BTB do 97.0 0.058 2E-06 41.9 15.9 174 72-253 13-223 (315)
329 2xzh_A Clathrin heavy chain 1; 97.0 0.083 2.8E-06 41.2 23.4 194 51-258 72-297 (365)
330 1tl2_A L10, protein (tachylect 97.0 0.061 2.1E-06 39.4 15.8 141 102-248 4-160 (236)
331 2woz_A Kelch repeat and BTB do 96.9 0.099 3.4E-06 40.6 17.6 171 74-253 26-233 (318)
332 3ei3_A DNA damage-binding prot 96.9 0.21 7.1E-06 46.3 20.2 171 72-251 807-999 (1158)
333 1cru_A Protein (soluble quinop 96.9 0.065 2.2E-06 44.2 15.6 104 47-155 28-162 (454)
334 3s25_A Hypothetical 7-bladed b 96.8 0.11 3.9E-06 40.2 18.8 160 71-253 36-218 (302)
335 2be1_A Serine/threonine-protei 96.8 0.0019 6.4E-08 50.9 5.5 190 11-216 10-236 (339)
336 1xi4_A Clathrin heavy chain; a 96.7 0.061 2.1E-06 50.2 15.2 180 71-255 124-335 (1630)
337 3ott_A Two-component system se 96.5 0.39 1.3E-05 42.3 26.7 193 45-254 62-263 (758)
338 3a9g_A Putative uncharacterize 96.5 0.23 7.7E-06 39.5 23.9 216 12-241 40-330 (354)
339 2zwa_A Leucine carboxyl methyl 96.3 0.45 1.5E-05 41.6 17.9 179 72-253 412-637 (695)
340 2zwa_A Leucine carboxyl methyl 96.2 0.2 6.8E-06 43.8 15.1 168 73-241 469-673 (695)
341 2uvk_A YJHT; unknown function, 96.0 0.18 6E-06 39.9 13.0 134 70-209 29-224 (357)
342 3sbq_A Nitrous-oxide reductase 95.8 0.067 2.3E-06 44.8 9.7 102 137-241 323-453 (638)
343 3sbq_A Nitrous-oxide reductase 95.1 0.43 1.5E-05 40.2 11.9 101 96-200 328-454 (638)
344 1xi4_A Clathrin heavy chain; a 95.1 0.42 1.4E-05 45.0 12.9 197 51-259 71-297 (1630)
345 2wg3_C Hedgehog-interacting pr 94.9 1.3 4.4E-05 36.6 14.5 109 92-200 15-158 (463)
346 2g8s_A Glucose/sorbosone dehyd 94.8 1.2 4E-05 35.3 23.2 67 183-249 273-350 (353)
347 2wg3_C Hedgehog-interacting pr 93.8 2.1 7.1E-05 35.4 13.5 103 137-241 14-157 (463)
348 1bpo_A Protein (clathrin); cla 93.8 2.3 8E-05 34.7 23.3 163 46-211 151-331 (494)
349 3ott_A Two-component system se 93.5 3.7 0.00013 36.1 26.9 212 12-247 74-303 (758)
350 3das_A Putative oxidoreductase 91.7 4 0.00014 32.2 24.7 220 12-241 43-326 (347)
351 4gq2_M Nucleoporin NUP120; bet 91.7 7.2 0.00025 35.5 15.1 39 138-176 237-275 (950)
352 3q6k_A 43.2 kDa salivary prote 88.1 8.8 0.0003 30.7 23.3 169 72-241 123-342 (381)
353 4gq2_M Nucleoporin NUP120; bet 87.7 16 0.00055 33.3 15.6 38 181-218 236-273 (950)
354 3no0_A DNA gyrase subunit A; D 87.6 7.7 0.00026 29.4 18.2 155 2-166 26-195 (276)
355 3zwu_A Alkaline phosphatase PH 84.9 5 0.00017 34.2 8.7 58 183-240 478-548 (592)
356 4fhn_B Nucleoporin NUP120; pro 83.5 7.2 0.00025 36.3 9.9 37 182-218 239-275 (1139)
357 4a9v_A PHOX; hydrolase, beta-p 83.5 8.2 0.00028 32.7 9.2 60 182-241 477-549 (592)
358 4hvt_A Ritya.17583.B, post-pro 83.1 23 0.00079 31.0 16.5 196 47-252 130-382 (711)
359 4fhn_B Nucleoporin NUP120; pro 82.4 4.4 0.00015 37.6 8.1 39 138-176 239-277 (1139)
360 3zwu_A Alkaline phosphatase PH 82.2 9 0.00031 32.7 9.2 59 139-198 478-548 (592)
361 3qhy_B Beta-lactamase inhibito 81.5 15 0.00052 27.8 11.8 168 71-253 80-248 (282)
362 3b7f_A Glycosyl hydrolase, BNR 80.9 19 0.00066 28.6 18.4 108 138-247 116-258 (394)
363 3q6k_A 43.2 kDa salivary prote 79.4 22 0.00076 28.4 17.2 136 113-251 124-306 (381)
364 4a9v_A PHOX; hydrolase, beta-p 77.4 21 0.00073 30.3 9.7 62 137-199 476-549 (592)
365 1wp5_A Topoisomerase IV; broke 77.4 23 0.0008 27.5 12.7 149 100-251 3-174 (323)
366 3qhy_B Beta-lactamase inhibito 77.3 21 0.00072 27.0 11.5 165 71-251 41-207 (282)
367 3f7f_A Nucleoporin NUP120; nuc 75.1 7.6 0.00026 33.9 6.7 37 138-176 223-259 (729)
368 3f7f_A Nucleoporin NUP120; nuc 67.0 11 0.00037 32.9 5.9 30 190-219 229-258 (729)
369 3uc1_A DNA gyrase subunit A; D 66.2 44 0.0015 26.0 15.9 108 101-210 108-227 (327)
370 3kci_A Probable E3 ubiquitin-p 62.5 57 0.0019 25.9 18.7 154 94-250 108-292 (389)
371 3uc1_A DNA gyrase subunit A; D 54.5 74 0.0025 24.7 21.9 202 3-210 45-278 (327)
372 3no0_A DNA gyrase subunit A; D 53.7 69 0.0024 24.1 16.1 148 101-251 79-246 (276)
373 1q47_A Semaphorin 3A; beta pro 49.5 77 0.0026 26.4 7.9 59 104-162 423-487 (495)
374 3al9_A Plexin-A2; beta-propell 46.4 90 0.0031 26.3 8.0 68 139-206 402-476 (539)
375 3c12_A FLGD, flagellar protein 44.8 54 0.0018 21.7 5.3 86 159-246 42-131 (138)
376 4gz8_A Semaphorin-3A; multi-do 43.8 1.2E+02 0.004 26.4 8.4 57 150-206 431-495 (667)
377 1q47_A Semaphorin 3A; beta pro 43.1 96 0.0033 25.8 7.6 57 150-206 423-487 (495)
378 1zvt_A Topoisomerase IV subuni 42.6 1E+02 0.0035 22.9 13.5 144 103-252 3-164 (256)
379 1zi0_A DNA gyrase subunit A; b 40.3 1.2E+02 0.0042 23.1 16.1 149 100-251 1-176 (307)
380 4gz8_A Semaphorin-3A; multi-do 37.8 1.2E+02 0.0041 26.4 7.5 59 104-162 431-495 (667)
381 1olz_A Semaphorin 4D; developm 37.3 1.1E+02 0.0038 26.5 7.3 58 104-162 417-477 (663)
382 3ol2_B Plexin-B1; beta-propell 37.1 1.3E+02 0.0046 25.2 7.5 59 103-162 401-461 (528)
383 3nvq_A Semaphorin-7A; beta-pro 36.2 1.2E+02 0.0042 25.9 7.2 59 104-162 382-444 (590)
384 3nvq_A Semaphorin-7A; beta-pro 35.1 1.7E+02 0.0059 25.0 7.9 58 149-206 381-444 (590)
385 3d8d_A Amyloid beta A4 precurs 34.8 51 0.0017 22.2 3.8 43 69-111 61-106 (148)
386 3osv_A Flagellar basal-BODY RO 34.6 90 0.0031 20.6 5.1 89 157-248 38-132 (138)
387 1zso_A Hypothetical protein; s 33.6 1.2E+02 0.004 20.9 6.5 40 84-123 103-142 (164)
388 3al9_A Plexin-A2; beta-propell 33.6 67 0.0023 27.1 5.3 60 103-162 414-476 (539)
389 3b7f_A Glycosyl hydrolase, BNR 27.2 2.2E+02 0.0077 22.2 17.0 101 103-207 23-143 (394)
390 3oky_A Plexin-A2; transmembran 25.6 3.2E+02 0.011 23.8 8.2 58 149-206 413-475 (681)
391 3ol2_B Plexin-B1; beta-propell 24.5 2.7E+02 0.0093 23.4 7.3 67 139-206 389-461 (528)
392 1zvt_A Topoisomerase IV subuni 22.9 2.3E+02 0.008 20.9 10.9 105 102-210 44-162 (256)
393 3l6v_A GYRA, DNA gyrase subuni 22.6 2.9E+02 0.0098 21.9 17.2 150 100-250 5-179 (370)
394 1suu_A DNA gyrase subunit A; t 22.0 2.7E+02 0.0092 21.3 22.1 156 5-167 52-231 (312)
395 2zux_A YESW protein; beta-prop 21.2 3.9E+02 0.013 22.8 10.6 43 134-176 361-409 (591)
No 1
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=4.1e-40 Score=262.07 Aligned_cols=233 Identities=16% Similarity=0.181 Sum_probs=208.6
Q ss_pred eEEeeecceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEecCC
Q 024185 13 ALLFARQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILRLRG 92 (271)
Q Consensus 13 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 92 (271)
.++.+..++.+.+|+...+.. .....+.+|...+.++.+++++.. +++++.|++|++||+++++.+..+..+.
T Consensus 50 ~l~tgs~D~~v~vW~~~~~~~--~~~~~l~gh~~~v~~~~~~~~~~~-----l~s~s~D~~i~lWd~~~~~~~~~~~~~~ 122 (321)
T 3ow8_A 50 TVVTGSLDDLVKVWKWRDERL--DLQWSLEGHQLGVVSVDISHTLPI-----AASSSLDAHIRLWDLENGKQIKSIDAGP 122 (321)
T ss_dssp EEEEEETTSCEEEEEEETTEE--EEEEEECCCSSCEEEEEECSSSSE-----EEEEETTSEEEEEETTTTEEEEEEECCT
T ss_pred EEEEEcCCCCEEEEECCCCCe--eeeeeeccCCCCEEEEEECCCCCE-----EEEEeCCCcEEEEECCCCCEEEEEeCCC
Confidence 455667789999998765522 233458899999999999999998 8899999999999999999998887764
Q ss_pred --cceEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEecCCeEEEEECCCCeE
Q 024185 93 --RPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEK 170 (271)
Q Consensus 93 --~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~~~~~ 170 (271)
+.+++|+|++++|++++.+|.|++||+++++. ...+..|...+.+++|+|++++|++++.|+.|++||+++++.
T Consensus 123 ~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~----~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~ 198 (321)
T 3ow8_A 123 VDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKK----EYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKL 198 (321)
T ss_dssp TCCCCEEECTTSSEEEEECTTSEEEEEETTTCSE----EEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE
T ss_pred ccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCce----eEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcE
Confidence 55699999999999999999999999998875 666778889999999999999999999999999999999999
Q ss_pred EEEeecCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCCceeEEEecCCcceeEEEEEecCCcEEEEeC--CeEEEEc
Q 024185 171 RCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWI 248 (271)
Q Consensus 171 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~~v~iw~ 248 (271)
+..+..|..+ |.+++|+|++++|++++.|+.|++||+++++....+.+|...|.+++|+|++++|++++ +.|++||
T Consensus 199 ~~~~~~h~~~--v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd 276 (321)
T 3ow8_A 199 LHTLEGHAMP--IRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWD 276 (321)
T ss_dssp EEEECCCSSC--CCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred EEEEcccCCc--eeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEe
Confidence 9999888766 99999999999999999999999999999999999999999999999999999999998 8899999
Q ss_pred CCCCCCCcCC
Q 024185 249 PNPSSNSTDE 258 (271)
Q Consensus 249 ~~~~~~~~~~ 258 (271)
+.++++....
T Consensus 277 ~~~~~~~~~~ 286 (321)
T 3ow8_A 277 VGTRTCVHTF 286 (321)
T ss_dssp TTTTEEEEEE
T ss_pred CCCCEEEEEE
Confidence 9988765543
No 2
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=4e-40 Score=262.12 Aligned_cols=224 Identities=19% Similarity=0.188 Sum_probs=202.5
Q ss_pred eeEEeeecceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEecC
Q 024185 12 QALLFARQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILRLR 91 (271)
Q Consensus 12 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 91 (271)
..++.+..++.+.+++...+ ..+..+..+...+.+++|+|+++. +++++.||.+++||+++++....+..+
T Consensus 93 ~~l~s~s~D~~i~lWd~~~~----~~~~~~~~~~~~~~~~~~spdg~~-----l~~g~~dg~v~i~~~~~~~~~~~~~~~ 163 (321)
T 3ow8_A 93 PIAASSSLDAHIRLWDLENG----KQIKSIDAGPVDAWTLAFSPDSQY-----LATGTHVGKVNIFGVESGKKEYSLDTR 163 (321)
T ss_dssp SEEEEEETTSEEEEEETTTT----EEEEEEECCTTCCCCEEECTTSSE-----EEEECTTSEEEEEETTTCSEEEEEECS
T ss_pred CEEEEEeCCCcEEEEECCCC----CEEEEEeCCCccEEEEEECCCCCE-----EEEEcCCCcEEEEEcCCCceeEEecCC
Confidence 34455566899999998777 445557788888999999999998 889999999999999999988888776
Q ss_pred C--cceEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEecCCeEEEEECCCCe
Q 024185 92 G--RPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGE 169 (271)
Q Consensus 92 ~--~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~~~~ 169 (271)
. +.+++|+|++++|++++.||.|++||+++++. ...+.+|..+|.+++|+|++++|++++.|+.|++||+++++
T Consensus 164 ~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~----~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~ 239 (321)
T 3ow8_A 164 GKFILSIAYSPDGKYLASGAIDGIINIFDIATGKL----LHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHAN 239 (321)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE----EEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCC
T ss_pred CceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcE----EEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcc
Confidence 4 56699999999999999999999999998775 66788999999999999999999999999999999999999
Q ss_pred EEEEeecCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCCceeEEEecCCcceeEEEEEecCCcEEEEeC--CeEEEE
Q 024185 170 KRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFW 247 (271)
Q Consensus 170 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~~v~iw 247 (271)
....+..|... |.+++|+|++++|++++.|+.|++||+++++++..+.+|...|.+++|+|++++|++++ +.|++|
T Consensus 240 ~~~~~~~h~~~--v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vw 317 (321)
T 3ow8_A 240 LAGTLSGHASW--VLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIY 317 (321)
T ss_dssp EEEEECCCSSC--EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEE
T ss_pred eeEEEcCCCCc--eEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEE
Confidence 99888888766 99999999999999999999999999999999999999999999999999999999998 889999
Q ss_pred cCC
Q 024185 248 IPN 250 (271)
Q Consensus 248 ~~~ 250 (271)
|..
T Consensus 318 d~p 320 (321)
T 3ow8_A 318 DCP 320 (321)
T ss_dssp ECC
T ss_pred eCC
Confidence 964
No 3
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=7.3e-40 Score=258.80 Aligned_cols=238 Identities=13% Similarity=0.126 Sum_probs=207.2
Q ss_pred ecceeEEeeecceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEE
Q 024185 9 PITQALLFARQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGIL 88 (271)
Q Consensus 9 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 88 (271)
|..+.++.+..++.+.+|+...+ ..++.+..|...+.++.|+|+++. +++|+.|++|++||+++++.+..+
T Consensus 23 p~~~~l~s~~~dg~v~lWd~~~~----~~~~~~~~~~~~v~~~~~~~~~~~-----l~s~s~d~~i~vwd~~~~~~~~~~ 93 (304)
T 2ynn_A 23 PTEPWVLTTLYSGRVELWNYETQ----VEVRSIQVTETPVRAGKFIARKNW-----IIVGSDDFRIRVFNYNTGEKVVDF 93 (304)
T ss_dssp SSSSEEEEEETTSEEEEEETTTT----EEEEEEECCSSCEEEEEEEGGGTE-----EEEEETTSEEEEEETTTCCEEEEE
T ss_pred CCCCEEEEEcCCCcEEEEECCCC----ceeEEeeccCCcEEEEEEeCCCCE-----EEEECCCCEEEEEECCCCcEEEEE
Confidence 55566777788999999998776 455668889999999999999998 899999999999999999999999
Q ss_pred ecCC--cceEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcC-CCcEEEEEecCCeEEEEEC
Q 024185 89 RLRG--RPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSN-DGKSMLLTTTNNNIYVLDA 165 (271)
Q Consensus 89 ~~~~--~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~d~~i~~~d~ 165 (271)
.+|. +.+++|+|++++|++|+.|++|++||++++.. ....+.+|...|.+++|+| ++..|++++.|++|++||+
T Consensus 94 ~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~---~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~ 170 (304)
T 2ynn_A 94 EAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWA---LEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSL 170 (304)
T ss_dssp ECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTE---EEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEET
T ss_pred eCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcc---hhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEEC
Confidence 8885 66799999999999999999999999987642 2456789999999999999 6789999999999999999
Q ss_pred CCCeEEEEeecCCCCCceeeEEECC--CCCEEEEecCCCcEEEEEcCCceeEEEecCCcceeEEEEEecCCcEEEEeC--
Q 024185 166 YGGEKRCGFSLEPSPNTNTEATFTP--DGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS-- 241 (271)
Q Consensus 166 ~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-- 241 (271)
++++....+..+.. ..+..+.|+| +++++++++.|+.|++||+++++++..+.+|...|.+++|+|++++|++++
T Consensus 171 ~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~D 249 (304)
T 2ynn_A 171 GQSTPNFTLTTGQE-RGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSED 249 (304)
T ss_dssp TCSSCSEEEECCCT-TCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETT
T ss_pred CCCCccceeccCCc-CcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcCC
Confidence 88776665543321 3478888876 788999999999999999999999999999999999999999999999998
Q ss_pred CeEEEEcCCCCCCCcCCC
Q 024185 242 SVLSFWIPNPSSNSTDES 259 (271)
Q Consensus 242 ~~v~iw~~~~~~~~~~~~ 259 (271)
+.|++||+.++++.....
T Consensus 250 g~i~iWd~~~~~~~~~~~ 267 (304)
T 2ynn_A 250 GTLKIWNSSTYKVEKTLN 267 (304)
T ss_dssp SCEEEEETTTCCEEEEEC
T ss_pred CeEEEEECCCCceeeecc
Confidence 889999999987665543
No 4
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=3.5e-40 Score=264.58 Aligned_cols=234 Identities=12% Similarity=0.073 Sum_probs=194.5
Q ss_pred ceeEEeeecceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEec
Q 024185 11 TQALLFARQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILRL 90 (271)
Q Consensus 11 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 90 (271)
...++.+..++.+.+|+...+...........+|.+.|.+++|+|++++ |++|+.|++|++||+++++.+..+.+
T Consensus 93 d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~-----l~sgs~d~~i~iwd~~~~~~~~~~~~ 167 (344)
T 4gqb_B 93 ERGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQ-----AVSGSKDICIKVWDLAQQVVLSSYRA 167 (344)
T ss_dssp TTEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSE-----EEEEETTSCEEEEETTTTEEEEEECC
T ss_pred CCeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCE-----EEEEeCCCeEEEEECCCCcEEEEEcC
Confidence 3567788889999999988774443434456689999999999999998 89999999999999999999999988
Q ss_pred CC--cceEEEcCCCC-EEEEEecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCC-CcEEEEEecCCeEEEEECC
Q 024185 91 RG--RPTVAFDQQGL-VFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSND-GKSMLLTTTNNNIYVLDAY 166 (271)
Q Consensus 91 ~~--~~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~d~~i~~~d~~ 166 (271)
|. +.+++|+|++. +|++++.|+.|++||+++++. ........|...+.+++|+|+ +++|++|+.|+.|++||++
T Consensus 168 h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~ 245 (344)
T 4gqb_B 168 HAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKP--ASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTK 245 (344)
T ss_dssp CSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSC--EEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESC
T ss_pred cCCceEEEEecCCCCCceeeeccccccccccccccce--eeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECC
Confidence 85 56799999884 789999999999999998875 233333455667999999994 6678899999999999999
Q ss_pred CCeEEEEeecCCCCCceeeEEECCCC-CEEEEecCCCcEEEEEcCCceeEEEecCCcceeEEEEEecCCc-EEEEeC--C
Q 024185 167 GGEKRCGFSLEPSPNTNTEATFTPDG-QYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRA-MFVAAS--S 242 (271)
Q Consensus 167 ~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~--~ 242 (271)
+++++..+..|... |.+++|+|++ ++|++|+.|++|++||+++++.. .+.+|.+.|++++|+|+++ +|++++ +
T Consensus 246 ~~~~~~~~~~h~~~--v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~V~~v~~sp~~~~llas~s~D~ 322 (344)
T 4gqb_B 246 STSCVLSSAVHSQC--VTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHRDFVRDATWSPLNHSLLTTVGWDH 322 (344)
T ss_dssp C--CCEEEECCSSC--EEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE-EECCCSSCEEEEEECSSSTTEEEEEETTS
T ss_pred CCcEEEEEcCCCCC--EEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCCCCEEEEEEeCCCCeEEEEEcCCC
Confidence 99999999988876 9999999998 57999999999999999988765 5688999999999999986 566776 8
Q ss_pred eEEEEcCCCCCC
Q 024185 243 VLSFWIPNPSSN 254 (271)
Q Consensus 243 ~v~iw~~~~~~~ 254 (271)
+|++|++.+...
T Consensus 323 ~v~~w~v~~~~~ 334 (344)
T 4gqb_B 323 QVVHHVVPTEPL 334 (344)
T ss_dssp CEEEEECCC---
T ss_pred eEEEEECCCCCC
Confidence 899999987544
No 5
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=2.1e-39 Score=260.12 Aligned_cols=230 Identities=13% Similarity=0.150 Sum_probs=202.6
Q ss_pred ecceeEEeeecceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEE
Q 024185 9 PITQALLFARQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGIL 88 (271)
Q Consensus 9 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 88 (271)
|....++.+..++.+..++...+.........+.+|.+.+.++.|++++. +++++.|++|++||+++++.+..+
T Consensus 107 ~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~------l~s~s~d~~i~~wd~~~~~~~~~~ 180 (340)
T 1got_B 107 PSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ------IVTSSGDTTCALWDIETGQQTTTF 180 (340)
T ss_dssp TTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE------EEEEETTSCEEEEETTTTEEEEEE
T ss_pred CCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCc------EEEEECCCcEEEEECCCCcEEEEE
Confidence 44455666777888888887655433345566889999999999999886 568899999999999999999999
Q ss_pred ecCC--cceEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEecCCeEEEEECC
Q 024185 89 RLRG--RPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAY 166 (271)
Q Consensus 89 ~~~~--~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~ 166 (271)
.+|. +.+++|+|+++++++|+.|+.|++||+++++. ...+.+|...|.+++|+|++++|++++.|++|++||++
T Consensus 181 ~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~----~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~ 256 (340)
T 1got_B 181 TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMC----RQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLR 256 (340)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSE----EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred cCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCee----EEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECC
Confidence 8875 56799999999999999999999999998775 66788999999999999999999999999999999999
Q ss_pred CCeEEEEeecCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCCceeEEEecCCcceeEEEEEecCCcEEEEeC--CeE
Q 024185 167 GGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVL 244 (271)
Q Consensus 167 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~~v 244 (271)
+++.+..+..+.....+.+++|+|+|+++++|+.||.|++||+.+++.+..+.+|...|.+++|+|+|++|++++ +.|
T Consensus 257 ~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i 336 (340)
T 1got_B 257 ADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFL 336 (340)
T ss_dssp TTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCE
T ss_pred CCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccE
Confidence 998887776444334599999999999999999999999999999999999999999999999999999999998 889
Q ss_pred EEEc
Q 024185 245 SFWI 248 (271)
Q Consensus 245 ~iw~ 248 (271)
++||
T Consensus 337 ~iWd 340 (340)
T 1got_B 337 KIWN 340 (340)
T ss_dssp EEEC
T ss_pred EecC
Confidence 9997
No 6
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=4.8e-40 Score=270.16 Aligned_cols=236 Identities=12% Similarity=0.151 Sum_probs=212.1
Q ss_pred eecceeEEeeecceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEE
Q 024185 8 LPITQALLFARQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGI 87 (271)
Q Consensus 8 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 87 (271)
.|..+.++.+..++.+.+|+...+ ...+.+.+|.+.|.+++|+|+++. +++|+.|++|++||+++++.+..
T Consensus 117 ~p~~~~l~s~s~Dg~i~vwd~~~~----~~~~~l~~h~~~V~~v~~~~~~~~-----l~sgs~D~~i~iwd~~~~~~~~~ 187 (410)
T 1vyh_C 117 HPVFSVMVSASEDATIKVWDYETG----DFERTLKGHTDSVQDISFDHSGKL-----LASCSADMTIKLWDFQGFECIRT 187 (410)
T ss_dssp CSSSSEEEEEESSSCEEEEETTTC----CCCEEECCCSSCEEEEEECTTSSE-----EEEEETTSCCCEEETTSSCEEEC
T ss_pred cCCCCEEEEEeCCCeEEEEECCCC----cEEEEEeccCCcEEEEEEcCCCCE-----EEEEeCCCeEEEEeCCCCceeEE
Confidence 344556667778999999998777 334558899999999999999998 89999999999999999999998
Q ss_pred EecCC--cceEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEecCCeEEEEEC
Q 024185 88 LRLRG--RPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDA 165 (271)
Q Consensus 88 ~~~~~--~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~ 165 (271)
+.+|. +.+++|+|++++|++++.|+.|++||+++++. ...+.+|...|.++.|+|+++++++++.|+.|++||+
T Consensus 188 ~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~----~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~ 263 (410)
T 1vyh_C 188 MHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYC----VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 263 (410)
T ss_dssp CCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCE----EEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred EcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcE----EEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEEC
Confidence 88775 67799999999999999999999999998875 6667899999999999999999999999999999999
Q ss_pred CCCeEEEEeecCCCCCceeeEEECCC--------------------CCEEEEecCCCcEEEEEcCCceeEEEecCCccee
Q 024185 166 YGGEKRCGFSLEPSPNTNTEATFTPD--------------------GQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVV 225 (271)
Q Consensus 166 ~~~~~~~~~~~~~~~~~v~~~~~~~~--------------------~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v 225 (271)
++++....+..|... +.+++|+|+ +.++++|+.|+.|++||+++++++..+.+|...|
T Consensus 264 ~~~~~~~~~~~h~~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v 341 (410)
T 1vyh_C 264 ATKECKAELREHRHV--VECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWV 341 (410)
T ss_dssp TTCCEEEEECCCSSC--EEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCE
T ss_pred CCCceeeEecCCCce--EEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcE
Confidence 999998888887766 999999996 6789999999999999999999999999999999
Q ss_pred EEEEEecCCcEEEEeC--CeEEEEcCCCCCCCcCC
Q 024185 226 ACLKWAPRRAMFVAAS--SVLSFWIPNPSSNSTDE 258 (271)
Q Consensus 226 ~~~~~s~~~~~l~~~~--~~v~iw~~~~~~~~~~~ 258 (271)
.+++|+|++++|++++ +.|++||+.+++.....
T Consensus 342 ~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~ 376 (410)
T 1vyh_C 342 RGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL 376 (410)
T ss_dssp EEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEE
T ss_pred EEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEE
Confidence 9999999999999998 88999999888766544
No 7
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=2.6e-39 Score=265.79 Aligned_cols=227 Identities=12% Similarity=0.118 Sum_probs=204.6
Q ss_pred ecceeEEeeecceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEE
Q 024185 9 PITQALLFARQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGIL 88 (271)
Q Consensus 9 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 88 (271)
|....++.+..++.+..|+...+ ..++.+.+|...+.++.|+|+++. +++++.|++|++||++++.++..+
T Consensus 160 ~~~~~l~sgs~D~~i~iwd~~~~----~~~~~~~~h~~~V~~v~~~p~~~~-----l~s~s~D~~i~~wd~~~~~~~~~~ 230 (410)
T 1vyh_C 160 HSGKLLASCSADMTIKLWDFQGF----ECIRTMHGHDHNVSSVSIMPNGDH-----IVSASRDKTIKMWEVQTGYCVKTF 230 (410)
T ss_dssp TTSSEEEEEETTSCCCEEETTSS----CEEECCCCCSSCEEEEEECSSSSE-----EEEEETTSEEEEEETTTCCEEEEE
T ss_pred CCCCEEEEEeCCCeEEEEeCCCC----ceeEEEcCCCCCEEEEEEeCCCCE-----EEEEeCCCeEEEEECCCCcEEEEE
Confidence 44455666677899999987655 455668899999999999999998 889999999999999999999999
Q ss_pred ecCC--cceEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCC-------------------
Q 024185 89 RLRG--RPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSND------------------- 147 (271)
Q Consensus 89 ~~~~--~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~------------------- 147 (271)
.+|. +.+++++|++++|++++.|+.|++||+.+++. ...+.+|...|.+++|+|+
T Consensus 231 ~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~----~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (410)
T 1vyh_C 231 TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKEC----KAELREHRHVVECISWAPESSYSSISEATGSETKKSGK 306 (410)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE----EEEECCCSSCEEEEEECCSCGGGGGGGCCSCC------
T ss_pred eCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCce----eeEecCCCceEEEEEEcCcccccchhhhccccccccCC
Confidence 8885 56699999999999999999999999998775 6677899999999999996
Q ss_pred -CcEEEEEecCCeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCCceeEEEecCCcceeE
Q 024185 148 -GKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVA 226 (271)
Q Consensus 148 -~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~ 226 (271)
+.+|++|+.|+.|++||+++++++..+.+|... |.+++|+|++++|++|+.||.|++||+++++++..+.+|...|+
T Consensus 307 ~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~--v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~ 384 (410)
T 1vyh_C 307 PGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW--VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVT 384 (410)
T ss_dssp -CCEEEEEETTSEEEEEETTTTEEEEEEECCSSC--EEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEE
T ss_pred CCCEEEEEeCCCeEEEEECCCCceEEEEECCCCc--EEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEE
Confidence 678999999999999999999999999888765 99999999999999999999999999999999999999999999
Q ss_pred EEEEecCCcEEEEeC--CeEEEEcCC
Q 024185 227 CLKWAPRRAMFVAAS--SVLSFWIPN 250 (271)
Q Consensus 227 ~~~~s~~~~~l~~~~--~~v~iw~~~ 250 (271)
+++|+|++.+|++|+ +.|++|+++
T Consensus 385 ~l~~~~~~~~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 385 SLDFHKTAPYVVTGSVDQTVKVWECR 410 (410)
T ss_dssp EEEECSSSSCEEEEETTSEEEEEC--
T ss_pred EEEEcCCCCEEEEEeCCCcEEEEeCC
Confidence 999999999999998 889999863
No 8
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=9.4e-38 Score=251.77 Aligned_cols=199 Identities=14% Similarity=0.191 Sum_probs=179.9
Q ss_pred cccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEecCC--cceEEEcC--CCCEEEEEecCCeEEE
Q 024185 41 FATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILRLRG--RPTVAFDQ--QGLVFAVAMEAGAIKL 116 (271)
Q Consensus 41 ~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~--~~~~~~~~--~~~~l~~~~~d~~i~i 116 (271)
+..|.+.+.++.|+|++.. +++++.|++|++||+++++.+..+.+|. +.+++|+| ++++|++|+.||.|++
T Consensus 150 ~~~h~~~v~~~~~~~~~~~-----l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~ 224 (354)
T 2pbi_B 150 VAMHTNYLSACSFTNSDMQ-----ILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMV 224 (354)
T ss_dssp EEECSSCEEEEEECSSSSE-----EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEE
T ss_pred eeccCCcEEEEEEeCCCCE-----EEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEE
Confidence 4467888899999999987 8899999999999999999999998885 55688877 5689999999999999
Q ss_pred EeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEecCCeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEE
Q 024185 117 FDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVV 196 (271)
Q Consensus 117 ~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 196 (271)
||+++++. ...+.+|...|.+++|+|++++|++++.|++|++||+++++.+..+..+.....+.+++|+|++++++
T Consensus 225 wd~~~~~~----~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~ 300 (354)
T 2pbi_B 225 WDMRSGQC----VQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLF 300 (354)
T ss_dssp EETTTCCE----EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEE
T ss_pred EECCCCcE----EEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEE
Confidence 99998875 66778999999999999999999999999999999999998877776554434588999999999999
Q ss_pred EecCCCcEEEEEcCCceeEEEecCCcceeEEEEEecCCcEEEEeC--CeEEEEc
Q 024185 197 SGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWI 248 (271)
Q Consensus 197 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~~v~iw~ 248 (271)
+|+.|+.|++||+.+++.+..+.+|...|++++|+|+|++|++++ +.|++|+
T Consensus 301 ~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 301 AGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred EEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 999999999999999999999999999999999999999999998 8899996
No 9
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=255.78 Aligned_cols=204 Identities=14% Similarity=0.066 Sum_probs=173.8
Q ss_pred ccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEE----ecC--CcceEEEcCCCCEEEEEecCCeEEEE
Q 024185 44 SKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGIL----RLR--GRPTVAFDQQGLVFAVAMEAGAIKLF 117 (271)
Q Consensus 44 ~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~----~~~--~~~~~~~~~~~~~l~~~~~d~~i~i~ 117 (271)
+...|.+++|+|++. +++++.||+|++||+++++....+ .+| .+.+++|+|++++|++|+.|++|++|
T Consensus 81 ~~~~v~~~~~s~d~~------l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iw 154 (344)
T 4gqb_B 81 TEAGVADLTWVGERG------ILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVW 154 (344)
T ss_dssp ESSCEEEEEEETTTE------EEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred cCCCEEEEEEeCCCe------EEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEE
Confidence 456799999999975 668999999999999998765443 355 36779999999999999999999999
Q ss_pred eCCCCCCCcceEEEecCCccceEEEEEcCCCc-EEEEEecCCeEEEEECCCCeEEEEeecCCCCCceeeEEECCC-CCEE
Q 024185 118 DSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGK-SMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPD-GQYV 195 (271)
Q Consensus 118 d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l 195 (271)
|+++++. ...+.+|...|.+++|+|++. +|++++.|++|++||+++++....+..+.....+.+++|+|+ ++++
T Consensus 155 d~~~~~~----~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l 230 (344)
T 4gqb_B 155 DLAQQVV----LSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVF 230 (344)
T ss_dssp ETTTTEE----EEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEE
T ss_pred ECCCCcE----EEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcce
Confidence 9998875 677889999999999999875 688999999999999999998888765555455889999995 5788
Q ss_pred EEecCCCcEEEEEcCCceeEEEecCCcceeEEEEEecCC-cEEEEeC--CeEEEEcCCCCCCCcC
Q 024185 196 VSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRR-AMFVAAS--SVLSFWIPNPSSNSTD 257 (271)
Q Consensus 196 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~--~~v~iw~~~~~~~~~~ 257 (271)
++|+.||.|++||+++++++..+.+|...|++++|+|++ ++|++++ ++|++||+.++++...
T Consensus 231 ~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~ 295 (344)
T 4gqb_B 231 VFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRS 295 (344)
T ss_dssp EEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEEE
T ss_pred EEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEE
Confidence 999999999999999999999999999999999999998 5788887 8899999998876543
No 10
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1e-38 Score=257.64 Aligned_cols=232 Identities=12% Similarity=0.064 Sum_probs=191.8
Q ss_pred ceeEEeeecceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEec
Q 024185 11 TQALLFARQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILRL 90 (271)
Q Consensus 11 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 90 (271)
...++.+..++.+.+|+...+...........+|.+.|.+++|+|+++. |++++.|+.|++||+++++.+..+..
T Consensus 105 d~~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~-----l~sgs~dg~v~iwd~~~~~~~~~~~~ 179 (357)
T 4g56_B 105 EKGILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQ-----AVSGGKDFSVKVWDLSQKAVLKSYNA 179 (357)
T ss_dssp TTEEEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSE-----EEEEETTSCEEEEETTTTEEEEEECC
T ss_pred CCCEEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCE-----EEEEeCCCeEEEEECCCCcEEEEEcC
Confidence 3567777888999998876653322222234578999999999999998 89999999999999999999999988
Q ss_pred CC--cceEEEcCCCC-EEEEEecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCC-CcEEEEEecCCeEEEEECC
Q 024185 91 RG--RPTVAFDQQGL-VFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSND-GKSMLLTTTNNNIYVLDAY 166 (271)
Q Consensus 91 ~~--~~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~d~~i~~~d~~ 166 (271)
|. +.+++|+|+++ ++++++.|+.|++||+++++. ........|...+.+++|+|+ +.+|++|+.|+.|++||++
T Consensus 180 h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~--~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~ 257 (357)
T 4g56_B 180 HSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKP--ATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIK 257 (357)
T ss_dssp CSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSC--BCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESS
T ss_pred CCCCEEEEEEccCCCceeeeeccCCceEEEECCCCce--eeeeeeccccccccchhhhhcccceEEEeecccceeEEECC
Confidence 75 56799999885 789999999999999998775 334445567788999999997 5678899999999999999
Q ss_pred CCeEEEEeecCCCCCceeeEEECCCC-CEEEEecCCCcEEEEEcCCceeEEEecCCcceeEEEEEec-CCcEEEEeC--C
Q 024185 167 GGEKRCGFSLEPSPNTNTEATFTPDG-QYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAP-RRAMFVAAS--S 242 (271)
Q Consensus 167 ~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~--~ 242 (271)
+++.+..+..+... |.+++|+|++ ++|++|+.|++|++||+++++.+..+ +|...|++++|+| ++.+|++++ +
T Consensus 258 ~~~~~~~~~~~~~~--v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~~V~~vafsP~d~~~l~s~s~Dg 334 (357)
T 4g56_B 258 NPDSAQTSAVHSQN--ITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRDFVTGVAWSPLDHSKFTTVGWDH 334 (357)
T ss_dssp CGGGCEEECCCSSC--EEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSSCEEEEEECSSSTTEEEEEETTS
T ss_pred CCcEeEEEecccee--EEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCCCEEEEEEeCCCCCEEEEEcCCC
Confidence 99999998888766 9999999987 57899999999999999999887765 7999999999999 799999998 8
Q ss_pred eEEEEcCCCC
Q 024185 243 VLSFWIPNPS 252 (271)
Q Consensus 243 ~v~iw~~~~~ 252 (271)
.|++|++.+.
T Consensus 335 ~v~iW~~~~~ 344 (357)
T 4g56_B 335 KVLHHHLPSE 344 (357)
T ss_dssp CEEEEECC--
T ss_pred eEEEEECCCC
Confidence 9999999663
No 11
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.8e-37 Score=248.91 Aligned_cols=211 Identities=13% Similarity=0.168 Sum_probs=191.1
Q ss_pred EEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEecCC--cceEEEcCCCCEEEEEecCCeE
Q 024185 37 IIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILRLRG--RPTVAFDQQGLVFAVAMEAGAI 114 (271)
Q Consensus 37 ~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~d~~i 114 (271)
..+.+.+|.+.|.++.|+|++++ +++++.||+|++||..+++.+..+..|. +.+++|+|++++|++++.|+.+
T Consensus 47 ~~~~l~gH~~~v~~~~~s~d~~~-----l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v 121 (340)
T 1got_B 47 TRRTLRGHLAKIYAMHWGTDSRL-----LLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNIC 121 (340)
T ss_dssp EEEEECCCSSCEEEEEECTTSSE-----EEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEE
T ss_pred hheeecCCCCceEEEEECCCCCE-----EEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeE
Confidence 44668899999999999999998 8999999999999999999988888775 5669999999999999999999
Q ss_pred EEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEecCCeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCE
Q 024185 115 KLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQY 194 (271)
Q Consensus 115 ~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 194 (271)
++||+.+.+........+.+|.+.|.++.|++++. +++++.|+.|++||+++++.+..+..|... |.+++|+|++++
T Consensus 122 ~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~--v~~~~~~~~~~~ 198 (340)
T 1got_B 122 SIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGD--VMSLSLAPDTRL 198 (340)
T ss_dssp EEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECCCSSC--EEEEEECTTSSE
T ss_pred EEEECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcCCCCc--eEEEEECCCCCE
Confidence 99999876532334556789999999999999876 889999999999999999999999888766 999999999999
Q ss_pred EEEecCCCcEEEEEcCCceeEEEecCCcceeEEEEEecCCcEEEEeC--CeEEEEcCCCCCCC
Q 024185 195 VVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNPSSNS 255 (271)
Q Consensus 195 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~~v~iw~~~~~~~~ 255 (271)
+++|+.|+.|++||+++++.+..+.+|...|.+++|+|++++|++++ +.|++||+++++..
T Consensus 199 l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~ 261 (340)
T 1got_B 199 FVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQEL 261 (340)
T ss_dssp EEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE
T ss_pred EEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEE
Confidence 99999999999999999999999999999999999999999999998 88999999886544
No 12
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.8e-36 Score=239.39 Aligned_cols=231 Identities=15% Similarity=0.143 Sum_probs=197.8
Q ss_pred eecceeEEeeecceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcc-eeE
Q 024185 8 LPITQALLFARQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLAS-FQG 86 (271)
Q Consensus 8 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~-~~~ 86 (271)
.|..+.++.+..++.+..++...+ ..+..+.+|.+.+.+++|+|++++ +++++.|++|++||++++. ...
T Consensus 64 ~~~~~~l~s~s~d~~i~vwd~~~~----~~~~~~~~h~~~v~~~~~~~~~~~-----l~sgs~D~~v~lWd~~~~~~~~~ 134 (304)
T 2ynn_A 64 IARKNWIIVGSDDFRIRVFNYNTG----EKVVDFEAHPDYIRSIAVHPTKPY-----VLSGSDDLTVKLWNWENNWALEQ 134 (304)
T ss_dssp EGGGTEEEEEETTSEEEEEETTTC----CEEEEEECCSSCEEEEEECSSSSE-----EEEEETTSCEEEEEGGGTTEEEE
T ss_pred eCCCCEEEEECCCCEEEEEECCCC----cEEEEEeCCCCcEEEEEEcCCCCE-----EEEECCCCeEEEEECCCCcchhh
Confidence 344556777788999999998777 445568899999999999999998 8999999999999998874 456
Q ss_pred EEecCC--cceEEEcC-CCCEEEEEecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcC--CCcEEEEEecCCeEE
Q 024185 87 ILRLRG--RPTVAFDQ-QGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSN--DGKSMLLTTTNNNIY 161 (271)
Q Consensus 87 ~~~~~~--~~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~--~~~~l~~~~~d~~i~ 161 (271)
.+.+|. +.+++|+| ++..|++|+.|+.|++||+.+... . .....+|...+..+.|+| ++++|++++.|++|+
T Consensus 135 ~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~--~-~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~ 211 (304)
T 2ynn_A 135 TFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTP--N-FTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIK 211 (304)
T ss_dssp EECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSC--S-EEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEE
T ss_pred hhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCc--c-ceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEE
Confidence 677775 67799999 678999999999999999987664 1 222345668899999987 778999999999999
Q ss_pred EEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCCceeEEEecCCcceeEEEEEecCCc--EEEE
Q 024185 162 VLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRA--MFVA 239 (271)
Q Consensus 162 ~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~--~l~~ 239 (271)
+||+++++++..+.+|... +.+++|+|++++|++|+.||.|++||+++++.+..+..|...+.+++|+|++. ++++
T Consensus 212 iWd~~~~~~~~~~~~h~~~--v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~as 289 (304)
T 2ynn_A 212 IWDYQTKSCVATLEGHMSN--VSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIAS 289 (304)
T ss_dssp EEETTTTEEEEEEECCSSC--EEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEE
T ss_pred EEeCCCCccceeeCCCCCC--EEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCCCCceEEEE
Confidence 9999999999999988876 99999999999999999999999999999999999999999999999999875 5888
Q ss_pred eC-CeEEEEcCCCC
Q 024185 240 AS-SVLSFWIPNPS 252 (271)
Q Consensus 240 ~~-~~v~iw~~~~~ 252 (271)
++ +.+.+|++...
T Consensus 290 g~~~g~~~~~~~~~ 303 (304)
T 2ynn_A 290 GFDNGFTVLSLGND 303 (304)
T ss_dssp EETTEEEEEECC--
T ss_pred ecCCceEEEEeccC
Confidence 87 77999988653
No 13
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=3.2e-37 Score=250.99 Aligned_cols=237 Identities=15% Similarity=0.190 Sum_probs=190.3
Q ss_pred ecceeEEeeecceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhh--------------------------
Q 024185 9 PITQALLFARQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIA-------------------------- 62 (271)
Q Consensus 9 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~-------------------------- 62 (271)
|..+.++.+..++.+.+|+...+ .....+..|...+.+++|+|+++.++.
T Consensus 76 p~~~~l~s~s~D~~v~iWd~~~~----~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~ 151 (380)
T 3iz6_a 76 PEKNWIVSASQDGRLIVWNALTS----QKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSR 151 (380)
T ss_dssp TTSSCEEEEETTSEEEEEETTTT----EEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCC
T ss_pred CCCCEEEEEeCCCeEEEEECCCC----ccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCcccee
Confidence 44456667778999999997666 333445556666666666665543210
Q ss_pred -------------------hhhhhhccCceEEEEEecCcceeEEE-----ecCC--cceEEEcC-CCCEEEEEecCCeEE
Q 024185 63 -------------------LCLVLLTTALEYGIFVLMLASFQGIL-----RLRG--RPTVAFDQ-QGLVFAVAMEAGAIK 115 (271)
Q Consensus 63 -------------------~~l~s~~~dg~i~iwd~~~~~~~~~~-----~~~~--~~~~~~~~-~~~~l~~~~~d~~i~ 115 (271)
..+++++.|++|++||+++++.+..+ .+|. +.+++|++ ++++|++|+.|+.|+
T Consensus 152 ~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~ 231 (380)
T 3iz6_a 152 VLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVR 231 (380)
T ss_dssp BCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEE
T ss_pred eccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEE
Confidence 01678888888888888888877766 3343 45588876 789999999999999
Q ss_pred EEeCCCC-CCCcceEEEecCCccceEEEEEcCCCcEEEEEecCCeEEEEECCCCeEEEEeecCCCC-----CceeeEEEC
Q 024185 116 LFDSRSY-DKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSP-----NTNTEATFT 189 (271)
Q Consensus 116 i~d~~~~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~-----~~v~~~~~~ 189 (271)
+||++.. +. ...+.+|.+.|.+++|+|++++|++++.|++|++||+++++.+..+..+... ..+.+++|+
T Consensus 232 ~wd~~~~~~~----~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 307 (380)
T 3iz6_a 232 LWDLRITSRA----VRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFS 307 (380)
T ss_dssp EEETTTTCCC----CEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEEC
T ss_pred EEECCCCCcc----eEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEEC
Confidence 9999744 33 5567799999999999999999999999999999999999988877654321 247899999
Q ss_pred CCCCEEEEecCCCcEEEEEcCCceeEEEe----cCCcceeEEEEEecCCcEEEEeC--CeEEEEcCCCCC
Q 024185 190 PDGQYVVSGSGDGTLHAWNINTRNEVACW----NGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNPSS 253 (271)
Q Consensus 190 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~----~~~~~~v~~~~~s~~~~~l~~~~--~~v~iw~~~~~~ 253 (271)
|+|+++++|+.||.|++||+.+++.+..+ .+|.+.|++++|+|+|++|++|+ +.|++|++...+
T Consensus 308 ~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 308 ISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGHR 377 (380)
T ss_dssp SSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSSS
T ss_pred CCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCCc
Confidence 99999999999999999999999988877 68999999999999999999998 889999998754
No 14
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.2e-36 Score=241.88 Aligned_cols=230 Identities=14% Similarity=0.150 Sum_probs=200.6
Q ss_pred eeEEeeecceeeEEEEeecccee-eEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEec
Q 024185 12 QALLFARQNIILILLESLCGIYQ-CMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILRL 90 (271)
Q Consensus 12 ~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 90 (271)
+.++-+..++.+..|+....... ...++.+.+|...+.+++|+|++++ +++++.|++|++||+++++.+..+.+
T Consensus 31 ~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~-----l~s~s~D~~v~~wd~~~~~~~~~~~~ 105 (319)
T 3frx_A 31 NLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAY-----ALSASWDKTLRLWDVATGETYQRFVG 105 (319)
T ss_dssp TEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSE-----EEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred cEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCE-----EEEEeCCCEEEEEECCCCCeeEEEcc
Confidence 34555667899999987543221 2346678999999999999999998 89999999999999999999999988
Q ss_pred CC--cceEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCC------CcEEEEEecCCeEEE
Q 024185 91 RG--RPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSND------GKSMLLTTTNNNIYV 162 (271)
Q Consensus 91 ~~--~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~------~~~l~~~~~d~~i~~ 162 (271)
|. +.+++|+|++++|++++.|+.|++||++... ...+.+|...+.+++|+|+ +..+++++.|+.|++
T Consensus 106 h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~-----~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~ 180 (319)
T 3frx_A 106 HKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQC-----LATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKA 180 (319)
T ss_dssp CSSCEEEEEECTTSCEEEEEETTSCEEEEETTSCE-----EEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEE
T ss_pred CCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCe-----EEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEE
Confidence 85 5669999999999999999999999997533 5667889999999999995 448999999999999
Q ss_pred EECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCCceeEEEecCCcceeEEEEEecCCcEEEEeC-
Q 024185 163 LDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS- 241 (271)
Q Consensus 163 ~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~- 241 (271)
||+++++....+..|... |.+++|+|++++|++++.||.|++||+.+++.+..+..+ ..|.+++|+|++.++++++
T Consensus 181 wd~~~~~~~~~~~~h~~~--v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~v~~~~~sp~~~~la~~~~ 257 (319)
T 3frx_A 181 WNLNQFQIEADFIGHNSN--INTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQ-DEVFSLAFSPNRYWLAAATA 257 (319)
T ss_dssp EETTTTEEEEEECCCCSC--EEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECC-SCEEEEEECSSSSEEEEEET
T ss_pred EECCcchhheeecCCCCc--EEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCC-CcEEEEEEcCCCCEEEEEcC
Confidence 999999998888888776 999999999999999999999999999999999998755 5799999999999999988
Q ss_pred CeEEEEcCCCCCC
Q 024185 242 SVLSFWIPNPSSN 254 (271)
Q Consensus 242 ~~v~iw~~~~~~~ 254 (271)
+.+++|+++.+..
T Consensus 258 ~~i~v~~~~~~~~ 270 (319)
T 3frx_A 258 TGIKVFSLDPQYL 270 (319)
T ss_dssp TEEEEEEETTEEE
T ss_pred CCcEEEEeCcCee
Confidence 7799999887543
No 15
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=8.3e-37 Score=249.63 Aligned_cols=229 Identities=17% Similarity=0.178 Sum_probs=196.2
Q ss_pred ecceeEEeeecceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEE
Q 024185 9 PITQALLFARQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGIL 88 (271)
Q Consensus 9 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 88 (271)
|....++.+..++.+.+++...+ .....+.+|...+.+++|+|+++. +++++.|++|++||+++++....+
T Consensus 133 ~dg~~l~s~~~d~~i~iwd~~~~----~~~~~~~~h~~~v~~~~~~p~~~~-----l~s~s~d~~v~iwd~~~~~~~~~~ 203 (393)
T 1erj_A 133 PDGKFLATGAEDRLIRIWDIENR----KIVMILQGHEQDIYSLDYFPSGDK-----LVSGSGDRTVRIWDLRTGQCSLTL 203 (393)
T ss_dssp TTSSEEEEEETTSCEEEEETTTT----EEEEEECCCSSCEEEEEECTTSSE-----EEEEETTSEEEEEETTTTEEEEEE
T ss_pred CCCCEEEEEcCCCeEEEEECCCC----cEEEEEccCCCCEEEEEEcCCCCE-----EEEecCCCcEEEEECCCCeeEEEE
Confidence 34456666778999999998776 455668899999999999999998 889999999999999999988777
Q ss_pred ecC-CcceEEEcC-CCCEEEEEecCCeEEEEeCCCCCCCcceEEEe-------cCCccceEEEEEcCCCcEEEEEecCCe
Q 024185 89 RLR-GRPTVAFDQ-QGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLV-------GGDTAEVCDIKFSNDGKSMLLTTTNNN 159 (271)
Q Consensus 89 ~~~-~~~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-------~~~~~~v~~~~~s~~~~~l~~~~~d~~ 159 (271)
..+ .+.+++|+| ++++|++++.|+.|++||+++++. ...+ .+|...|.+++|+|++++|++++.|+.
T Consensus 204 ~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~----~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~ 279 (393)
T 1erj_A 204 SIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFL----VERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRS 279 (393)
T ss_dssp ECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCE----EEEEC------CCCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred EcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcE----EEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCE
Confidence 654 467799999 899999999999999999988764 2222 578999999999999999999999999
Q ss_pred EEEEECCCC------------eEEEEeecCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCCceeEEEecCCcceeEE
Q 024185 160 IYVLDAYGG------------EKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVAC 227 (271)
Q Consensus 160 i~~~d~~~~------------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~ 227 (271)
|++||+++. .+...+.+|... |.+++|+|+++++++|+.|+.|++||+++++.+..+.+|...|.+
T Consensus 280 v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~--v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~ 357 (393)
T 1erj_A 280 VKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDF--VLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVIS 357 (393)
T ss_dssp EEEEEC---------------CEEEEEECCSSC--EEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEE
T ss_pred EEEEECCCCCCcccccCCCCCcceEEEecccCc--EEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEE
Confidence 999999763 334456666654 999999999999999999999999999999999999999999999
Q ss_pred EEEec------CCcEEEEeC--CeEEEEcCCCC
Q 024185 228 LKWAP------RRAMFVAAS--SVLSFWIPNPS 252 (271)
Q Consensus 228 ~~~s~------~~~~l~~~~--~~v~iw~~~~~ 252 (271)
++|+| ++++|++|+ +.|++|++...
T Consensus 358 v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 358 VAVANGSSLGPEYNVFATGSGDCKARIWKYKKI 390 (393)
T ss_dssp EEECSSCTTCTTCEEEEEEETTSEEEEEEEEEC
T ss_pred EEecCCcCcCCCCCEEEEECCCCcEEECccccc
Confidence 99886 688999998 88999998653
No 16
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=2.4e-36 Score=239.37 Aligned_cols=210 Identities=16% Similarity=0.201 Sum_probs=189.6
Q ss_pred EEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEecCC--cceEEEcCCCCEEEEEecCCeE
Q 024185 37 IIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILRLRG--RPTVAFDQQGLVFAVAMEAGAI 114 (271)
Q Consensus 37 ~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~d~~i 114 (271)
....+.+|.+.|.+++|+|++++ +++++.||.|++|+..+++....+..|. +.+++|+|++++|++++.|+.|
T Consensus 15 ~~~~~~gh~~~v~~~~~s~~~~~-----l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i 89 (312)
T 4ery_A 15 LKFTLAGHTKAVSSVKFSPNGEW-----LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTL 89 (312)
T ss_dssp EEEEECCCSSCEEEEEECTTSSE-----EEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred eEEEEcccCCcEEEEEECCCCCE-----EEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEE
Confidence 34557899999999999999998 8899999999999999999888888775 5669999999999999999999
Q ss_pred EEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEecCCeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCE
Q 024185 115 KLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQY 194 (271)
Q Consensus 115 ~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 194 (271)
++||+++++. ...+.+|...|.+++|+|++++|++++.|+.|++||+++++.+..+..|..+ +.+++|+|++++
T Consensus 90 ~vwd~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~--v~~~~~~~~~~~ 163 (312)
T 4ery_A 90 KIWDVSSGKC----LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDP--VSAVHFNRDGSL 163 (312)
T ss_dssp EEEETTTCCE----EEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSC--EEEEEECTTSSE
T ss_pred EEEECCCCcE----EEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCc--EEEEEEcCCCCE
Confidence 9999998875 6667889999999999999999999999999999999999999888877765 999999999999
Q ss_pred EEEecCCCcEEEEEcCCceeEEEe-cCCcceeEEEEEecCCcEEEEeC--CeEEEEcCCCCCCCcC
Q 024185 195 VVSGSGDGTLHAWNINTRNEVACW-NGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNPSSNSTD 257 (271)
Q Consensus 195 l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~--~~v~iw~~~~~~~~~~ 257 (271)
+++++.||.|++||+++++.+..+ ..+...+..++|+|++++|++++ +.|++||+.+++....
T Consensus 164 l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~ 229 (312)
T 4ery_A 164 IVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKT 229 (312)
T ss_dssp EEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEE
T ss_pred EEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEE
Confidence 999999999999999999888776 44567899999999999999987 8899999988765443
No 17
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=4.5e-36 Score=237.84 Aligned_cols=237 Identities=14% Similarity=0.194 Sum_probs=202.4
Q ss_pred ecceeEEeeecceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEE
Q 024185 9 PITQALLFARQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGIL 88 (271)
Q Consensus 9 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 88 (271)
|..+.++.+..++.+..++...+ .....+.+|...+.+++|+|+++. +++++.|+.|++||+++++.+..+
T Consensus 33 ~~~~~l~s~~~dg~i~iw~~~~~----~~~~~~~~h~~~v~~~~~~~~~~~-----l~s~~~d~~i~vwd~~~~~~~~~~ 103 (312)
T 4ery_A 33 PNGEWLASSSADKLIKIWGAYDG----KFEKTISGHKLGISDVAWSSDSNL-----LVSASDDKTLKIWDVSSGKCLKTL 103 (312)
T ss_dssp TTSSEEEEEETTSCEEEEETTTC----CEEEEECCCSSCEEEEEECTTSSE-----EEEEETTSEEEEEETTTCCEEEEE
T ss_pred CCCCEEEEeeCCCeEEEEeCCCc----ccchhhccCCCceEEEEEcCCCCE-----EEEECCCCEEEEEECCCCcEEEEE
Confidence 44556777778999999988766 344558899999999999999998 889999999999999999999999
Q ss_pred ecCC--cceEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEecCCeEEEEECC
Q 024185 89 RLRG--RPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAY 166 (271)
Q Consensus 89 ~~~~--~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~ 166 (271)
.+|. +.+++|+|++++|++++.|+.|++||+++++. ...+..|..+|.+++|+|+++++++++.|+.|++||++
T Consensus 104 ~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~ 179 (312)
T 4ery_A 104 KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKC----LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA 179 (312)
T ss_dssp ECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCE----EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred cCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEE----EEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECC
Confidence 8875 56699999999999999999999999998775 66778899999999999999999999999999999999
Q ss_pred CCeEEEEeecCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCCceeEEEecCCcceeEE--EEEe-cCCcEEEEeC--
Q 024185 167 GGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVAC--LKWA-PRRAMFVAAS-- 241 (271)
Q Consensus 167 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~--~~~s-~~~~~l~~~~-- 241 (271)
+++.+..+..... ..+..++|+|+++++++++.||.|++||+++++.+..+.+|...+.. ..++ +++.+|++++
T Consensus 180 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d 258 (312)
T 4ery_A 180 SGQCLKTLIDDDN-PPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSED 258 (312)
T ss_dssp TCCEEEEECCSSC-CCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTT
T ss_pred CCceeeEEeccCC-CceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCC
Confidence 9988777643322 34888999999999999999999999999999999999888764332 2344 6788999998
Q ss_pred CeEEEEcCCCCCCCcCCC
Q 024185 242 SVLSFWIPNPSSNSTDES 259 (271)
Q Consensus 242 ~~v~iw~~~~~~~~~~~~ 259 (271)
+.|++||+.+++......
T Consensus 259 g~i~vwd~~~~~~~~~~~ 276 (312)
T 4ery_A 259 NLVYIWNLQTKEIVQKLQ 276 (312)
T ss_dssp SCEEEEETTTCCEEEEEC
T ss_pred CEEEEEECCCchhhhhhh
Confidence 889999999887665443
No 18
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.8e-36 Score=241.00 Aligned_cols=209 Identities=14% Similarity=0.151 Sum_probs=183.3
Q ss_pred EEEEcccccceEEeeEEecCC-chhhhhhhhhhccCceEEEEEecC-----cceeEEEecCC--cceEEEcCCCCEEEEE
Q 024185 37 IIEFFATSKGIRRGLFLSACL-QLMIALCLVLLTTALEYGIFVLML-----ASFQGILRLRG--RPTVAFDQQGLVFAVA 108 (271)
Q Consensus 37 ~~~~~~~~~~~v~~~~~s~~~-~~~~~~~l~s~~~dg~i~iwd~~~-----~~~~~~~~~~~--~~~~~~~~~~~~l~~~ 108 (271)
....+.+|.+.|.+++++|++ +. |++++.|++|++||+.. +.++..+.+|. +.+++|+|++++|+++
T Consensus 9 l~~~l~gH~~~V~~l~~~~~~~~~-----l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~ 83 (319)
T 3frx_A 9 LRGTLEGHNGWVTSLATSAGQPNL-----LLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSA 83 (319)
T ss_dssp EEEEECCCSSCEEEEEECSSCTTE-----EEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEE
T ss_pred EEEEEccccceEEEEEccCCCccE-----EEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEE
Confidence 344588999999999999976 55 78999999999999864 33566777775 5669999999999999
Q ss_pred ecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEecCCeEEEEECCCCeEEEEeecCCCCCceeeEEE
Q 024185 109 MEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATF 188 (271)
Q Consensus 109 ~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~ 188 (271)
+.|++|++||+++++. ...+.+|...|.+++|+|+++++++++.|++|++||++ ++.+..+..|... +.++.|
T Consensus 84 s~D~~v~~wd~~~~~~----~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~--v~~~~~ 156 (319)
T 3frx_A 84 SWDKTLRLWDVATGET----YQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDW--VSQVRV 156 (319)
T ss_dssp ETTSEEEEEETTTTEE----EEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSC--EEEEEE
T ss_pred eCCCEEEEEECCCCCe----eEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCc--EEEEEE
Confidence 9999999999998875 66678999999999999999999999999999999986 4566777777665 999999
Q ss_pred CCC------CCEEEEecCCCcEEEEEcCCceeEEEecCCcceeEEEEEecCCcEEEEeC--CeEEEEcCCCCCCCcC
Q 024185 189 TPD------GQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNPSSNSTD 257 (271)
Q Consensus 189 ~~~------~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~~v~iw~~~~~~~~~~ 257 (271)
+|. +..+++++.|+.|++||+++++....+.+|...|.+++|+|++++|++++ +.|++||+.+++....
T Consensus 157 ~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~ 233 (319)
T 3frx_A 157 VPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYT 233 (319)
T ss_dssp CCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEE
T ss_pred ccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEE
Confidence 985 45899999999999999999999999999999999999999999999998 8899999998765443
No 19
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=2.9e-36 Score=243.04 Aligned_cols=211 Identities=11% Similarity=0.098 Sum_probs=188.0
Q ss_pred EEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEecCC--cceEEEcCCCCEEEEEecCCeE
Q 024185 37 IIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILRLRG--RPTVAFDQQGLVFAVAMEAGAI 114 (271)
Q Consensus 37 ~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~d~~i 114 (271)
..+.+.+|.+.|.+++|+|+++. +++++.||+|++||..+++....+..+. +.+++|+|+++++++++.|+.+
T Consensus 56 ~~~~l~gH~~~V~~~~~s~d~~~-----l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i 130 (354)
T 2pbi_B 56 TRRTLKGHGNKVLCMDWCKDKRR-----IVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKC 130 (354)
T ss_dssp EEEEEECCSSCEEEEEECTTSSE-----EEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEE
T ss_pred EEEEecCCCCeEEEEEECCCCCE-----EEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCE
Confidence 44668899999999999999998 8999999999999999998888887664 6679999999999999999999
Q ss_pred EEEeCCCCCC--CcceEEEecCCccceEEEEEcCCCcEEEEEecCCeEEEEECCCCeEEEEeecCCCCCceeeEEECC--
Q 024185 115 KLFDSRSYDK--GPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTP-- 190 (271)
Q Consensus 115 ~i~d~~~~~~--~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~-- 190 (271)
++|++..... .......+.+|...|.+++|+|+++.|++++.|++|++||+++++.+..+..|... +.+++|+|
T Consensus 131 ~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~--v~~~~~~~~~ 208 (354)
T 2pbi_B 131 SVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGAD--VLCLDLAPSE 208 (354)
T ss_dssp EEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSC--EEEEEECCCS
T ss_pred EEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCC--eEEEEEEeCC
Confidence 9999875421 11224456679999999999999999999999999999999999999999888776 88899987
Q ss_pred CCCEEEEecCCCcEEEEEcCCceeEEEecCCcceeEEEEEecCCcEEEEeC--CeEEEEcCCCCCC
Q 024185 191 DGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNPSSN 254 (271)
Q Consensus 191 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~~v~iw~~~~~~~ 254 (271)
+++++++|+.||.|++||+++++++..+.+|...|.+++|+|++++|++++ +.|++||++.++.
T Consensus 209 ~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~ 274 (354)
T 2pbi_B 209 TGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADRE 274 (354)
T ss_dssp SCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcE
Confidence 578999999999999999999999999999999999999999999999998 8899999987654
No 20
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.7e-35 Score=237.74 Aligned_cols=236 Identities=13% Similarity=0.156 Sum_probs=193.7
Q ss_pred ecceeEEeeecceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcc--eeE
Q 024185 9 PITQALLFARQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLAS--FQG 86 (271)
Q Consensus 9 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~--~~~ 86 (271)
|..+.|+.+..++.+.+++...+.... ......+|.+.|.+++|+|++++ |++++.|+++++||..++. .+.
T Consensus 26 p~g~~las~~~D~~i~iw~~~~~~~~~-~~~~~~~h~~~v~~~~~sp~g~~-----l~s~s~D~~v~iw~~~~~~~~~~~ 99 (345)
T 3fm0_A 26 PAGTLLASCGGDRRIRIWGTEGDSWIC-KSVLSEGHQRTVRKVAWSPCGNY-----LASASFDATTCIWKKNQDDFECVT 99 (345)
T ss_dssp TTSSCEEEEETTSCEEEEEEETTEEEE-EEEECSSCSSCEEEEEECTTSSE-----EEEEETTSCEEEEEECCC-EEEEE
T ss_pred CCCCEEEEEcCCCeEEEEEcCCCccee-eeeeccccCCcEEEEEECCCCCE-----EEEEECCCcEEEEEccCCCeEEEE
Confidence 444566667779999999887663221 12335789999999999999998 8999999999999998764 566
Q ss_pred EEecCC--cceEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEecCCeEEEEE
Q 024185 87 ILRLRG--RPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLD 164 (271)
Q Consensus 87 ~~~~~~--~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d 164 (271)
.+.+|. +.+++|+|++++|++++.|+.|++||+.+... ......+.+|...|.+++|+|++++|++++.|+.|++||
T Consensus 100 ~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~-~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~ 178 (345)
T 3fm0_A 100 TLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDE-YECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYR 178 (345)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSC-EEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEE
T ss_pred EccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCC-eEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEE
Confidence 777774 66799999999999999999999999987653 122445778999999999999999999999999999999
Q ss_pred CCCCeE--EEEeecCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCC---------------ceeEEEecC-CcceeE
Q 024185 165 AYGGEK--RCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINT---------------RNEVACWNG-NIGVVA 226 (271)
Q Consensus 165 ~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~---------------~~~~~~~~~-~~~~v~ 226 (271)
.++++. ...+..|... |.+++|+|+|++|++++.|++|++||... .+++..+.+ |...|.
T Consensus 179 ~~~~~~~~~~~~~~h~~~--v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 256 (345)
T 3fm0_A 179 EEEDDWVCCATLEGHEST--VWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIY 256 (345)
T ss_dssp EETTEEEEEEEECCCSSC--EEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEE
T ss_pred ecCCCEEEEEEecCCCCc--eEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEE
Confidence 988764 4566666655 99999999999999999999999999632 133445555 888999
Q ss_pred EEEEecCCcEEEEeC--CeEEEEcCCCCC
Q 024185 227 CLKWAPRRAMFVAAS--SVLSFWIPNPSS 253 (271)
Q Consensus 227 ~~~~s~~~~~l~~~~--~~v~iw~~~~~~ 253 (271)
+++|+|++..|++++ +.|++|+.+...
T Consensus 257 ~v~~~~~~~~l~s~~~d~~i~vw~~~~~~ 285 (345)
T 3fm0_A 257 DIAWCQLTGALATACGDDAIRVFQEDPNS 285 (345)
T ss_dssp EEEECTTTCCEEEEETTSCEEEEEECTTS
T ss_pred EEEEecCCCEEEEEeCCCeEEEEEeCCCC
Confidence 999999999999987 789999987654
No 21
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.8e-35 Score=237.52 Aligned_cols=234 Identities=13% Similarity=0.108 Sum_probs=191.4
Q ss_pred eeEEeeecceeeEEEEeeccce---eeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEE
Q 024185 12 QALLFARQNIILILLESLCGIY---QCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGIL 88 (271)
Q Consensus 12 ~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 88 (271)
+.++.+..++.+.+|+...+.. .......+.+|...|.+++|+|++.+ +++++.|++|++||+++++.+..+
T Consensus 40 ~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~-----l~s~s~D~~v~lwd~~~~~~~~~~ 114 (343)
T 2xzm_R 40 PVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCF-----AISSSWDKTLRLWDLRTGTTYKRF 114 (343)
T ss_dssp CEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTE-----EEEEETTSEEEEEETTSSCEEEEE
T ss_pred CEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCE-----EEEEcCCCcEEEEECCCCcEEEEE
Confidence 3455566789999998764321 12345668899999999999999998 889999999999999999999999
Q ss_pred ecCC--cceEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCC----------cEEEEEec
Q 024185 89 RLRG--RPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDG----------KSMLLTTT 156 (271)
Q Consensus 89 ~~~~--~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~----------~~l~~~~~ 156 (271)
.+|. +.+++|+|++++|++++.|+.|++||+..... .......+|...|.+++|+|++ .++++++.
T Consensus 115 ~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~ 192 (343)
T 2xzm_R 115 VGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECK--FSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGW 192 (343)
T ss_dssp ECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEE--EECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEET
T ss_pred cCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCce--eeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcC
Confidence 8875 66799999999999999999999999974321 1111123688899999999987 78999999
Q ss_pred CCeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCC-ceeEEEecCCcceeEEEEEecCCc
Q 024185 157 NNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINT-RNEVACWNGNIGVVACLKWAPRRA 235 (271)
Q Consensus 157 d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~v~~~~~s~~~~ 235 (271)
|+.|++|| .+.+....+..|... |.+++|+|+|++|++|+.||.|++||+.+ ......+. +...|.+++|+|++.
T Consensus 193 d~~i~iwd-~~~~~~~~~~~h~~~--v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~-~~~~v~~v~~sp~~~ 268 (343)
T 2xzm_R 193 DGRLKVWN-TNFQIRYTFKAHESN--VNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQREFD-AGSTINQIAFNPKLQ 268 (343)
T ss_dssp TSEEEEEE-TTTEEEEEEECCSSC--EEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSEEEE-CSSCEEEEEECSSSC
T ss_pred CCEEEEEc-CCCceeEEEcCcccc--ceEEEECCCCCEEEEEcCCCeEEEEECCCCcccceeec-CCCcEEEEEECCCCC
Confidence 99999999 556777778777765 99999999999999999999999999954 44444443 455799999999999
Q ss_pred EEEEeC-CeEEEEcCCCCCCCc
Q 024185 236 MFVAAS-SVLSFWIPNPSSNST 256 (271)
Q Consensus 236 ~l~~~~-~~v~iw~~~~~~~~~ 256 (271)
++++++ +.+++||+.+++...
T Consensus 269 ~la~~~d~~v~iw~~~~~~~~~ 290 (343)
T 2xzm_R 269 WVAVGTDQGVKIFNLMTQSKAP 290 (343)
T ss_dssp EEEEEESSCEEEEESSSCCSCS
T ss_pred EEEEECCCCEEEEEeCCCCCCc
Confidence 988776 889999998876543
No 22
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-35 Score=237.04 Aligned_cols=230 Identities=13% Similarity=0.136 Sum_probs=183.5
Q ss_pred eEEeeecceeeEEEEeeccceeeEEEEEc-cc-ccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecC-------cc
Q 024185 13 ALLFARQNIILILLESLCGIYQCMIIEFF-AT-SKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLML-------AS 83 (271)
Q Consensus 13 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~-------~~ 83 (271)
.++.+..++.+.+++...+.. .....+ .. |.+.|.+++|+|+++. |++++.|++|++||++. .+
T Consensus 26 ~las~~~D~~i~lw~~~~~~~--~~~~~~~~~~h~~~v~~v~~sp~~~~-----las~s~D~~v~iw~~~~~~~~~~~~~ 98 (330)
T 2hes_X 26 ILATGSTDRKIKLVSVKYDDF--TLIDVLDETAHKKAIRSVAWRPHTSL-----LAAGSFDSTVSIWAKEESADRTFEMD 98 (330)
T ss_dssp EEEEEESSSCEEEEECSSSCC--EEEEEECTTCCCSCEEEEEECTTSSE-----EEEEETTSCEEEEEC-------CCCE
T ss_pred EEEEEcCCCEEEEEEecCCCe--EEEEEEecCCccCCEEEEEECCCCCE-----EEEEeCCCcEEEEEcccCcCccccce
Confidence 445556789999998765422 222334 34 8999999999999998 89999999999999853 34
Q ss_pred eeEEEecCC--cceEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEecCCeEE
Q 024185 84 FQGILRLRG--RPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIY 161 (271)
Q Consensus 84 ~~~~~~~~~--~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~ 161 (271)
.+..+.+|. +.+++|+|++++|++++.|+.|++||+............+.+|...|.+++|+|++++|++++.|++|+
T Consensus 99 ~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~ 178 (330)
T 2hes_X 99 LLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVR 178 (330)
T ss_dssp EEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEE
T ss_pred eEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEE
Confidence 566677774 677999999999999999999999999543221223456789999999999999999999999999999
Q ss_pred EEECCCC--eEEEEeecCCCCCceeeEEECCC--CCEEEEecCCCcEEEEEcCCc--------eeEEEecC-CcceeEEE
Q 024185 162 VLDAYGG--EKRCGFSLEPSPNTNTEATFTPD--GQYVVSGSGDGTLHAWNINTR--------NEVACWNG-NIGVVACL 228 (271)
Q Consensus 162 ~~d~~~~--~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~--------~~~~~~~~-~~~~v~~~ 228 (271)
+||.+++ +++..+.+|... |.+++|+|+ +.++++++.|++|++||++++ .....+.+ |...|.++
T Consensus 179 iW~~~~~~~~~~~~~~~h~~~--v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v 256 (330)
T 2hes_X 179 IWKDYDDDWECVAVLNGHEGT--VWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNV 256 (330)
T ss_dssp EEEEETTEEEEEEEECCCSSC--EEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEE
T ss_pred EEECCCCCeeEEEEccCCCCc--EEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEE
Confidence 9998876 567778777765 999999999 779999999999999999765 34555555 88999999
Q ss_pred EEecCCcEEEEeC--CeEEEEcCCCC
Q 024185 229 KWAPRRAMFVAAS--SVLSFWIPNPS 252 (271)
Q Consensus 229 ~~s~~~~~l~~~~--~~v~iw~~~~~ 252 (271)
+|++++ +|++++ +.|++||..++
T Consensus 257 ~~s~~~-~l~s~~~dg~v~iw~~~~~ 281 (330)
T 2hes_X 257 AWGFNG-LIASVGADGVLAVYEEVDG 281 (330)
T ss_dssp EECTTS-CEEEEETTSCEEEEEEETT
T ss_pred EEcCCC-EEEEEeCCCEEEEEEcCCC
Confidence 999776 667766 88999998765
No 23
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=9.2e-36 Score=234.56 Aligned_cols=232 Identities=10% Similarity=0.126 Sum_probs=187.9
Q ss_pred ecceeEEeeecceeeEEEEeeccceeeEEEEEcccccceEEeeEEecC--CchhhhhhhhhhccCceEEEEEecCcc--e
Q 024185 9 PITQALLFARQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSAC--LQLMIALCLVLLTTALEYGIFVLMLAS--F 84 (271)
Q Consensus 9 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~~~~~~l~s~~~dg~i~iwd~~~~~--~ 84 (271)
|..+.++.+..++.+.+++...+.. ..+..+.+|.+.|.+++|+++ ++. |++++.|++|++||+++++ .
T Consensus 19 ~~g~~las~s~D~~v~iw~~~~~~~--~~~~~l~gH~~~V~~v~~s~~~~g~~-----l~s~s~D~~v~iWd~~~~~~~~ 91 (297)
T 2pm7_B 19 YYGKRMATCSSDKTIKIFEVEGETH--KLIDTLTGHEGPVWRVDWAHPKFGTI-----LASCSYDGKVMIWKEENGRWSQ 91 (297)
T ss_dssp TTSSEEEEEETTSCEEEEEBCSSCB--CCCEEECCCSSCEEEEEECCGGGCSE-----EEEEETTTEEEEEEBSSSCBCC
T ss_pred CCCCEEEEEeCCCEEEEEecCCCCc--EEEEEEccccCCeEEEEecCCCcCCE-----EEEEcCCCEEEEEEcCCCceEE
Confidence 4445666777799999998754321 233558899999999999864 677 8899999999999998874 4
Q ss_pred eEEEecC--CcceEEEcCC--CCEEEEEecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCC-------------
Q 024185 85 QGILRLR--GRPTVAFDQQ--GLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSND------------- 147 (271)
Q Consensus 85 ~~~~~~~--~~~~~~~~~~--~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~------------- 147 (271)
+..+..| .+.+++|+|+ +++|++++.|+.|++||+++... .....+.+|...|.+++|+|+
T Consensus 92 ~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~--~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~ 169 (297)
T 2pm7_B 92 IAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGT--TSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKE 169 (297)
T ss_dssp CEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSC--BCCEEEECCSSCEEEEEECCCC------------
T ss_pred EEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCc--eeeeeeecccCccceEeecCCcccccccCCCCCC
Confidence 5556655 4677999997 88999999999999999987643 123456789999999999997
Q ss_pred CcEEEEEecCCeEEEEECCCCe----EEEEeecCCCCCceeeEEECCCC---CEEEEecCCCcEEEEEcCCce---eEEE
Q 024185 148 GKSMLLTTTNNNIYVLDAYGGE----KRCGFSLEPSPNTNTEATFTPDG---QYVVSGSGDGTLHAWNINTRN---EVAC 217 (271)
Q Consensus 148 ~~~l~~~~~d~~i~~~d~~~~~----~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~dg~i~iwd~~~~~---~~~~ 217 (271)
+++|++++.|++|++||+++++ ....+.+|... |.+++|+|++ ++|++++.|++|++||+++.. ....
T Consensus 170 ~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~--V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~ 247 (297)
T 2pm7_B 170 SRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDW--VRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTL 247 (297)
T ss_dssp CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSC--EEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEE
T ss_pred cceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCc--eEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceee
Confidence 5789999999999999998765 55667777765 9999999995 899999999999999998743 1223
Q ss_pred e--cCCcceeEEEEEecCCcEEEEeC--CeEEEEcCCC
Q 024185 218 W--NGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNP 251 (271)
Q Consensus 218 ~--~~~~~~v~~~~~s~~~~~l~~~~--~~v~iw~~~~ 251 (271)
+ ..|...|.+++|+|++++|++++ +.|++|+...
T Consensus 248 ~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 248 LKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (297)
T ss_dssp SSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred eecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECC
Confidence 3 46788999999999999999987 8899999763
No 24
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=7.6e-36 Score=241.52 Aligned_cols=202 Identities=9% Similarity=0.050 Sum_probs=167.6
Q ss_pred ccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEecC-CcceEEEcCCCCEEEEEecCCeEEEEeCCCC
Q 024185 44 SKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILRLR-GRPTVAFDQQGLVFAVAMEAGAIKLFDSRSY 122 (271)
Q Consensus 44 ~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~ 122 (271)
++..+.+++|||||++++ +++++.|++|++||+++++.+..+..+ .+..++|+|||+++++++.+ .+.+|+..++
T Consensus 132 ~~~~~~~v~fSpDg~~la---~as~~~d~~i~iwd~~~~~~~~~~~~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~ 207 (365)
T 4h5i_A 132 ADDYTKLVYISREGTVAA---IASSKVPAIMRIIDPSDLTEKFEIETRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTG 207 (365)
T ss_dssp TTCCEEEEEECTTSSCEE---EEESCSSCEEEEEETTTTEEEEEEECSSCCCEEEECTTSSEEEEECSS-CEEEEETTTC
T ss_pred cccCEEEEEEcCCCCEEE---EEECCCCCEEEEeECCCCcEEEEeCCCCceEEEEEccCCceEEeccce-eEEEEEeccC
Confidence 345688899999999831 246778999999999999988888644 47889999999999999854 5667776666
Q ss_pred CCCcceEEEecCCccceEEEEEcCCCcEEEEEecCC----eEEEEECCCCeE----EEEeecCCCCCceeeEEECCCCCE
Q 024185 123 DKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNN----NIYVLDAYGGEK----RCGFSLEPSPNTNTEATFTPDGQY 194 (271)
Q Consensus 123 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~----~i~~~d~~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~ 194 (271)
+. .......+|...|.+++|+|+++++++++.|+ .+++||+..... ...+..+... |.+++|+|||++
T Consensus 208 ~~--~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~--V~~~~~Spdg~~ 283 (365)
T 4h5i_A 208 SC--IARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKG--ITSMDVDMKGEL 283 (365)
T ss_dssp CE--EEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSC--EEEEEECTTSCE
T ss_pred cc--eeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCC--eEeEEECCCCCc
Confidence 53 23344567889999999999999999999887 688999877653 2334555544 999999999999
Q ss_pred EEEecCCCcEEEEEcCCceeEEEe-cCCcceeEEEEEecCCcEEEEeC--CeEEEEcCCCCC
Q 024185 195 VVSGSGDGTLHAWNINTRNEVACW-NGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNPSS 253 (271)
Q Consensus 195 l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~--~~v~iw~~~~~~ 253 (271)
|++|+.|++|+|||+++++++..+ .+|...|++++|+|||++|+++| ++|+|||+....
T Consensus 284 lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~~ 345 (365)
T 4h5i_A 284 AVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLNY 345 (365)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTTT
T ss_pred eEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCCC
Confidence 999999999999999999999885 78999999999999999999998 899999996543
No 25
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=4.1e-37 Score=248.25 Aligned_cols=229 Identities=10% Similarity=0.031 Sum_probs=181.1
Q ss_pred ceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEE----EecC--Cc
Q 024185 20 NIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGI----LRLR--GR 93 (271)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~----~~~~--~~ 93 (271)
++.+..++...+...........+|...|.+++|+|++.+ ++++.||+|++||+.+++.... ..+| .+
T Consensus 69 d~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~------l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V 142 (357)
T 4g56_B 69 GGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGI------LVASDSGAVELWEILEKESLLVNKFAKYEHDDIV 142 (357)
T ss_dssp CEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEE------EEEETTSCEEEC--------CCCCEEECCCSSCE
T ss_pred cCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCE------EEEECCCEEEEeeccccceeEEEeeccCCCCCCE
Confidence 4667776655543222222224467788999999999874 4678899999999988765432 2344 46
Q ss_pred ceEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCc-EEEEEecCCeEEEEECCCCeEEE
Q 024185 94 PTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGK-SMLLTTTNNNIYVLDAYGGEKRC 172 (271)
Q Consensus 94 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~d~~i~~~d~~~~~~~~ 172 (271)
.+++|+|++++|++++.|+.|++||+++++. ...+.+|...|.+++|+|++. ++++++.|+.|++||+++++...
T Consensus 143 ~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~----~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~ 218 (357)
T 4g56_B 143 KTLSVFSDGTQAVSGGKDFSVKVWDLSQKAV----LKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPAT 218 (357)
T ss_dssp EEEEECSSSSEEEEEETTSCEEEEETTTTEE----EEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBC
T ss_pred EEEEECCCCCEEEEEeCCCeEEEEECCCCcE----EEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceee
Confidence 7799999999999999999999999998775 677889999999999999875 78899999999999999998877
Q ss_pred EeecCCCCCceeeEEECCC-CCEEEEecCCCcEEEEEcCCceeEEEecCCcceeEEEEEecCC-cEEEEeC--CeEEEEc
Q 024185 173 GFSLEPSPNTNTEATFTPD-GQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRR-AMFVAAS--SVLSFWI 248 (271)
Q Consensus 173 ~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~--~~v~iw~ 248 (271)
.+........+.+++|+|+ ++++++|+.|+.|++||+++++.+..+.+|...|++++|+|++ ++|++++ ++|+|||
T Consensus 219 ~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd 298 (357)
T 4g56_B 219 RIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLD 298 (357)
T ss_dssp BCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEEC
T ss_pred eeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEE
Confidence 7665555566999999998 5688999999999999999999999999999999999999987 5788887 8899999
Q ss_pred CCCCCCCcCC
Q 024185 249 PNPSSNSTDE 258 (271)
Q Consensus 249 ~~~~~~~~~~ 258 (271)
++++++....
T Consensus 299 ~~~~~~~~~~ 308 (357)
T 4g56_B 299 ADFSEVFRDL 308 (357)
T ss_dssp TTSCEEEEEC
T ss_pred CCCCcEeEEC
Confidence 9988765543
No 26
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.2e-35 Score=238.75 Aligned_cols=238 Identities=12% Similarity=0.192 Sum_probs=188.1
Q ss_pred ecceeEEeeecceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcc---ee
Q 024185 9 PITQALLFARQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLAS---FQ 85 (271)
Q Consensus 9 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~---~~ 85 (271)
|..+.++.+..++.+.+++...+.. .....+.+|.+.|.+++|+|++++ |++++.|++|++||++++. .+
T Consensus 71 p~g~~l~s~s~D~~v~iw~~~~~~~--~~~~~~~~h~~~v~~v~~sp~~~~-----l~s~s~D~~v~iwd~~~~~~~~~~ 143 (345)
T 3fm0_A 71 PCGNYLASASFDATTCIWKKNQDDF--ECVTTLEGHENEVKSVAWAPSGNL-----LATCSRDKSVWVWEVDEEDEYECV 143 (345)
T ss_dssp TTSSEEEEEETTSCEEEEEECCC-E--EEEEEECCCSSCEEEEEECTTSSE-----EEEEETTSCEEEEEECTTSCEEEE
T ss_pred CCCCEEEEEECCCcEEEEEccCCCe--EEEEEccCCCCCceEEEEeCCCCE-----EEEEECCCeEEEEECCCCCCeEEE
Confidence 4445566667788998888765422 334668899999999999999998 8999999999999998764 34
Q ss_pred EEEecCC--cceEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEecCCeEEEE
Q 024185 86 GILRLRG--RPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVL 163 (271)
Q Consensus 86 ~~~~~~~--~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~ 163 (271)
..+..|. +.+++|+|++++|++++.|+.|++||.++++. .....+.+|...|.+++|+|++++|++++.|++|++|
T Consensus 144 ~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~--~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW 221 (345)
T 3fm0_A 144 SVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDW--VCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIW 221 (345)
T ss_dssp EEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEE--EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred EEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCE--EEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEe
Confidence 5566664 66799999999999999999999999987653 2356688999999999999999999999999999999
Q ss_pred ECCCC---------------eEEEEeec-CCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCCce---------eEEEe
Q 024185 164 DAYGG---------------EKRCGFSL-EPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRN---------EVACW 218 (271)
Q Consensus 164 d~~~~---------------~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~---------~~~~~ 218 (271)
|.... +++..+.. |. ..|.+++|+|++..+++++.|+.|++|+...+. .....
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~--~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~ 299 (345)
T 3fm0_A 222 RQYLPGNEQGVACSGSDPSWKCICTLSGFHS--RTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLH 299 (345)
T ss_dssp EEECTTCTTCCCCC---CEEEEEEEECSSCS--SCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEET
T ss_pred ccccCCCCccceeeccCCccceeEEecCCCC--CcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeec
Confidence 96321 22333333 33 349999999999999999999999999987542 12234
Q ss_pred cCCcceeEEEEEecCC-cEEEEeC--CeEEEEcCCCCCCCcC
Q 024185 219 NGNIGVVACLKWAPRR-AMFVAAS--SVLSFWIPNPSSNSTD 257 (271)
Q Consensus 219 ~~~~~~v~~~~~s~~~-~~l~~~~--~~v~iw~~~~~~~~~~ 257 (271)
.+|...|++++|+|++ .+|++++ |.|++|++.+++....
T Consensus 300 ~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~~~~ 341 (345)
T 3fm0_A 300 QAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEGLHH 341 (345)
T ss_dssp TSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC------
T ss_pred ccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCCccc
Confidence 6899999999999997 4899987 8899999988775543
No 27
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.7e-35 Score=252.98 Aligned_cols=220 Identities=19% Similarity=0.280 Sum_probs=192.5
Q ss_pred ecceeEEeeecceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEE
Q 024185 9 PITQALLFARQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGIL 88 (271)
Q Consensus 9 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 88 (271)
|..+.++.+..++.+..++. .+ ..+..+..|...+.+++|+|++++ +++++.|+.|++||. +++.+..+
T Consensus 354 ~~g~~l~~~~~dg~v~~~~~-~~----~~~~~~~~~~~~v~~~~~s~dg~~-----l~~~~~d~~v~~~~~-~~~~~~~~ 422 (577)
T 2ymu_A 354 PDGQTIASASDDKTVKLWNR-NG----QLLQTLTGHSSSVRGVAFSPDGQT-----IASASDDKTVKLWNR-NGQLLQTL 422 (577)
T ss_dssp TTSSEEEEEETTSEEEEEET-TC----CEEEEEECCSSCEEEEEECTTSSC-----EEEEETTSEEEEECT-TCCEEEEE
T ss_pred CCCCEEEEEeCCCEEEEEcC-CC----CEEEEecCCCCCeEEEEECCCCCE-----EEEEeCCCEEEEEeC-CCCEEEEe
Confidence 44456667777888888873 33 344557889999999999999998 889999999999996 67778888
Q ss_pred ecCC--cceEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEecCCeEEEEECC
Q 024185 89 RLRG--RPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAY 166 (271)
Q Consensus 89 ~~~~--~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~ 166 (271)
..|. +.+++|+|++++|++++.|+.|++||... +. ...+.+|...|.+++|+|++++|++++.|+.|++||.
T Consensus 423 ~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~-~~----~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~- 496 (577)
T 2ymu_A 423 TGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNG-QL----LQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR- 496 (577)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTS-CE----EEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-
T ss_pred cCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECCC-CE----EEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-
Confidence 7775 56699999999999999999999999753 32 5567789999999999999999999999999999994
Q ss_pred CCeEEEEeecCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCCceeEEEecCCcceeEEEEEecCCcEEEEeC--CeE
Q 024185 167 GGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVL 244 (271)
Q Consensus 167 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~~v 244 (271)
+++.++.+..|... |++++|+||+++|++++.||.|++||. +++.+..+.+|.+.|++++|+|||++|++++ +.|
T Consensus 497 ~~~~~~~~~~h~~~--v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i 573 (577)
T 2ymu_A 497 NGQLLQTLTGHSSS--VRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKTV 573 (577)
T ss_dssp TSCEEEEEECCSSC--EEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCE
T ss_pred CCCEEEEEeCCCCC--EEEEEEcCCCCEEEEEECcCEEEEEeC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEE
Confidence 68888889888776 999999999999999999999999995 6889999999999999999999999999997 889
Q ss_pred EEEc
Q 024185 245 SFWI 248 (271)
Q Consensus 245 ~iw~ 248 (271)
++||
T Consensus 574 ~~Wd 577 (577)
T 2ymu_A 574 KLWN 577 (577)
T ss_dssp EEEC
T ss_pred EEeC
Confidence 9997
No 28
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=4.4e-36 Score=258.37 Aligned_cols=230 Identities=14% Similarity=0.196 Sum_probs=193.2
Q ss_pred ecceeEEeeecceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcc--eeE
Q 024185 9 PITQALLFARQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLAS--FQG 86 (271)
Q Consensus 9 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~--~~~ 86 (271)
|..+.++++. +..+.+++...+ .....+.+|...|.+++|+|+|++ +++|+.|++|++||+.+++ ...
T Consensus 28 pdg~~l~~~~-~~~v~l~~~~~~----~~~~~~~~h~~~v~~~~~spdg~~-----lasg~~d~~v~lWd~~~~~~~~~~ 97 (611)
T 1nr0_A 28 PAGDKIQYCN-GTSVYTVPVGSL----TDTEIYTEHSHQTTVAKTSPSGYY-----CASGDVHGNVRIWDTTQTTHILKT 97 (611)
T ss_dssp TTSSEEEEEE-TTEEEEEETTCS----SCCEEECCCSSCEEEEEECTTSSE-----EEEEETTSEEEEEESSSTTCCEEE
T ss_pred CCCCEEEeCC-CCEEEEecCCCc----ccCeEecCCCCceEEEEECCCCcE-----EEEEeCCCCEEEeECCCCcceeeE
Confidence 3344555554 557777776544 334558899999999999999999 9999999999999997554 345
Q ss_pred EEecCC--cceEEEcCCCCEEEEEecC----CeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCc-EEEEEecCCe
Q 024185 87 ILRLRG--RPTVAFDQQGLVFAVAMEA----GAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGK-SMLLTTTNNN 159 (271)
Q Consensus 87 ~~~~~~--~~~~~~~~~~~~l~~~~~d----~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~d~~ 159 (271)
.+..|. +.+++|+|++++|++++.+ +.|++||.. +. ...+.+|...|.+++|+|++. .|++++.|++
T Consensus 98 ~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~--~~----~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~ 171 (611)
T 1nr0_A 98 TIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTG--TS----NGNLTGQARAMNSVDFKPSRPFRIISGSDDNT 171 (611)
T ss_dssp EEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTC--CB----CBCCCCCSSCEEEEEECSSSSCEEEEEETTSC
T ss_pred eecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeCC--CC----cceecCCCCCceEEEECCCCCeEEEEEeCCCe
Confidence 566664 6679999999999998765 478888853 32 345679999999999999987 5999999999
Q ss_pred EEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCCceeEEEec-------CCcceeEEEEEec
Q 024185 160 IYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWN-------GNIGVVACLKWAP 232 (271)
Q Consensus 160 i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-------~~~~~v~~~~~s~ 232 (271)
|++||.++++....+..|... |.+++|+|+|++|++++.|++|++||+.+++.+..+. +|.+.|.+++|+|
T Consensus 172 v~lwd~~~~~~~~~l~~H~~~--V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~sp 249 (611)
T 1nr0_A 172 VAIFEGPPFKFKSTFGEHTKF--VHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSP 249 (611)
T ss_dssp EEEEETTTBEEEEEECCCSSC--EEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECT
T ss_pred EEEEECCCCeEeeeeccccCc--eEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECC
Confidence 999999999998888888766 9999999999999999999999999999999988884 7999999999999
Q ss_pred CCcEEEEeC--CeEEEEcCCCCCCCc
Q 024185 233 RRAMFVAAS--SVLSFWIPNPSSNST 256 (271)
Q Consensus 233 ~~~~l~~~~--~~v~iw~~~~~~~~~ 256 (271)
++++|++++ ++|++||+++++...
T Consensus 250 dg~~l~s~s~D~~v~lWd~~~~~~~~ 275 (611)
T 1nr0_A 250 DGTKIASASADKTIKIWNVATLKVEK 275 (611)
T ss_dssp TSSEEEEEETTSEEEEEETTTTEEEE
T ss_pred CCCEEEEEeCCCeEEEEeCCCCceee
Confidence 999999998 889999999876544
No 29
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=2.8e-35 Score=240.57 Aligned_cols=199 Identities=18% Similarity=0.185 Sum_probs=172.7
Q ss_pred eEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEecCC--cceEEEcCCCCEEEEEecCCeEEEEeCCCCCC
Q 024185 47 IRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILRLRG--RPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDK 124 (271)
Q Consensus 47 ~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 124 (271)
.+.+++|+|++++ +++++.|+.|++||+++++.+..+.+|. +.+++|+|++++|++++.|+.|++||+++++.
T Consensus 125 ~v~~v~~s~dg~~-----l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~ 199 (393)
T 1erj_A 125 YIRSVCFSPDGKF-----LATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQC 199 (393)
T ss_dssp BEEEEEECTTSSE-----EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE
T ss_pred eEEEEEECCCCCE-----EEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCee
Confidence 4889999999998 8899999999999999999999998875 56799999999999999999999999998764
Q ss_pred CcceEEEecCCccceEEEEEcC-CCcEEEEEecCCeEEEEECCCCeEEEEee-------cCCCCCceeeEEECCCCCEEE
Q 024185 125 GPFDTFLVGGDTAEVCDIKFSN-DGKSMLLTTTNNNIYVLDAYGGEKRCGFS-------LEPSPNTNTEATFTPDGQYVV 196 (271)
Q Consensus 125 ~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~d~~i~~~d~~~~~~~~~~~-------~~~~~~~v~~~~~~~~~~~l~ 196 (271)
...+. +...+.+++|+| +++++++++.|+.|++||+++++.+..+. .|. ..|.+++|+|++++++
T Consensus 200 ----~~~~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~--~~v~~v~~~~~g~~l~ 272 (393)
T 1erj_A 200 ----SLTLS-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHK--DSVYSVVFTRDGQSVV 272 (393)
T ss_dssp ----EEEEE-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCS--SCEEEEEECTTSSEEE
T ss_pred ----EEEEE-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCC--CCEEEEEECCCCCEEE
Confidence 33333 557899999999 89999999999999999999998877663 344 3499999999999999
Q ss_pred EecCCCcEEEEEcCCc------------eeEEEecCCcceeEEEEEecCCcEEEEeC--CeEEEEcCCCCCCCcC
Q 024185 197 SGSGDGTLHAWNINTR------------NEVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNPSSNSTD 257 (271)
Q Consensus 197 ~~~~dg~i~iwd~~~~------------~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~~v~iw~~~~~~~~~~ 257 (271)
+++.|+.|++||+++. .+...+.+|...|.+++|+|++++|++++ +.|++||..+++....
T Consensus 273 s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~ 347 (393)
T 1erj_A 273 SGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLM 347 (393)
T ss_dssp EEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEE
T ss_pred EEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEE
Confidence 9999999999999753 34567788999999999999999999998 8899999998876543
No 30
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=3.4e-35 Score=235.90 Aligned_cols=205 Identities=16% Similarity=0.150 Sum_probs=174.1
Q ss_pred EEEEcccccceEEeeEE-----ec-CCchhhhhhhhhhccCceEEEEEecCc-------ceeEEEecCC--cceEEEcCC
Q 024185 37 IIEFFATSKGIRRGLFL-----SA-CLQLMIALCLVLLTTALEYGIFVLMLA-------SFQGILRLRG--RPTVAFDQQ 101 (271)
Q Consensus 37 ~~~~~~~~~~~v~~~~~-----s~-~~~~~~~~~l~s~~~dg~i~iwd~~~~-------~~~~~~~~~~--~~~~~~~~~ 101 (271)
....+.+|.+.|.+++| ++ +++. |++|+.|++|++||+.++ .+...+.+|. +.+++|+|+
T Consensus 13 ~~~~l~gH~~~V~~~~~~~s~~~~~d~~~-----l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~ 87 (343)
T 2xzm_R 13 KRGILEGHSDWVTSIVAGFSQKENEDSPV-----LISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQE 87 (343)
T ss_dssp EEEEEECCSSCEEEEEECCCSSTTCCCCE-----EEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSS
T ss_pred eeeeeccchhhhhheeeEEEeecCCCCCE-----EEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCC
Confidence 34568899999999999 66 7887 899999999999999753 3556677774 667999999
Q ss_pred CCEEEEEecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEecCCeEEEEECCCCeEEEEeecCCCCC
Q 024185 102 GLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPN 181 (271)
Q Consensus 102 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~ 181 (271)
+.++++++.|++|++||+++++. ...+.+|...|.+++|+|++++|++++.|+.|++||+.............+..
T Consensus 88 ~~~l~s~s~D~~v~lwd~~~~~~----~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~ 163 (343)
T 2xzm_R 88 NCFAISSSWDKTLRLWDLRTGTT----YKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSD 163 (343)
T ss_dssp TTEEEEEETTSEEEEEETTSSCE----EEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSS
T ss_pred CCEEEEEcCCCcEEEEECCCCcE----EEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCc
Confidence 99999999999999999998875 66678999999999999999999999999999999998443332222122334
Q ss_pred ceeeEEECCCC----------CEEEEecCCCcEEEEEcCCceeEEEecCCcceeEEEEEecCCcEEEEeC--CeEEEEcC
Q 024185 182 TNTEATFTPDG----------QYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIP 249 (271)
Q Consensus 182 ~v~~~~~~~~~----------~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~~v~iw~~ 249 (271)
.+.+++|+|++ .++++++.||.|++|| .+.+....+.+|...|.+++|+|+|++|++++ +.|++||+
T Consensus 164 ~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~ 242 (343)
T 2xzm_R 164 WVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDI 242 (343)
T ss_dssp CEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEES
T ss_pred eeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEEC
Confidence 59999999987 7999999999999999 45677788899999999999999999999998 88999999
Q ss_pred CC
Q 024185 250 NP 251 (271)
Q Consensus 250 ~~ 251 (271)
..
T Consensus 243 ~~ 244 (343)
T 2xzm_R 243 LN 244 (343)
T ss_dssp SC
T ss_pred CC
Confidence 44
No 31
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=9.7e-36 Score=234.42 Aligned_cols=204 Identities=12% Similarity=0.206 Sum_probs=174.7
Q ss_pred EcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecC--cceeEEEecCC--cceEEEcCC--CCEEEEEecCCe
Q 024185 40 FFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLML--ASFQGILRLRG--RPTVAFDQQ--GLVFAVAMEAGA 113 (271)
Q Consensus 40 ~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~--~~~~~~~~~~~--~~~~~~~~~--~~~l~~~~~d~~ 113 (271)
.+.+|.+.|.+++|+|++++ |++++.|++|++||+++ .+.+.++.+|. +.+++|+|+ +++|++++.|++
T Consensus 4 ~~~~h~~~V~~~~~s~~g~~-----las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~ 78 (297)
T 2pm7_B 4 IANAHNEMIHDAVMDYYGKR-----MATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK 78 (297)
T ss_dssp ECCSCSSCEEEEEECTTSSE-----EEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTE
T ss_pred eccCCcCceEEEEECCCCCE-----EEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCE
Confidence 47789999999999999998 89999999999999974 36778888885 566999864 899999999999
Q ss_pred EEEEeCCCCCCCcceEEEecCCccceEEEEEcCC--CcEEEEEecCCeEEEEECCCCeE--EEEeecCCCCCceeeEEEC
Q 024185 114 IKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSND--GKSMLLTTTNNNIYVLDAYGGEK--RCGFSLEPSPNTNTEATFT 189 (271)
Q Consensus 114 i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~d~~i~~~d~~~~~~--~~~~~~~~~~~~v~~~~~~ 189 (271)
|++||+++++. .....+.+|...|.+++|+|+ +.+|++++.|+.|++||++++.. ...+..|... +.+++|+
T Consensus 79 v~iWd~~~~~~--~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~--v~~~~~~ 154 (297)
T 2pm7_B 79 VMIWKEENGRW--SQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIG--VNSASWA 154 (297)
T ss_dssp EEEEEBSSSCB--CCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSC--EEEEEEC
T ss_pred EEEEEcCCCce--EEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCc--cceEeec
Confidence 99999987653 124556789999999999997 88999999999999999987632 3445566654 9999999
Q ss_pred CC-------------CCEEEEecCCCcEEEEEcCCce----eEEEecCCcceeEEEEEecCC---cEEEEeC--CeEEEE
Q 024185 190 PD-------------GQYVVSGSGDGTLHAWNINTRN----EVACWNGNIGVVACLKWAPRR---AMFVAAS--SVLSFW 247 (271)
Q Consensus 190 ~~-------------~~~l~~~~~dg~i~iwd~~~~~----~~~~~~~~~~~v~~~~~s~~~---~~l~~~~--~~v~iw 247 (271)
|+ +++|++|+.|+.|++||+++++ ....+.+|...|.+++|+|++ .+|++++ ++|++|
T Consensus 155 p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iW 234 (297)
T 2pm7_B 155 PATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIW 234 (297)
T ss_dssp CCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEE
T ss_pred CCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEE
Confidence 97 5799999999999999998765 567889999999999999985 7899998 889999
Q ss_pred cCCCC
Q 024185 248 IPNPS 252 (271)
Q Consensus 248 ~~~~~ 252 (271)
|+++.
T Consensus 235 d~~~~ 239 (297)
T 2pm7_B 235 TQDNE 239 (297)
T ss_dssp EESST
T ss_pred EeCCC
Confidence 99764
No 32
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=2.1e-35 Score=254.12 Aligned_cols=233 Identities=14% Similarity=0.185 Sum_probs=193.1
Q ss_pred ecceeEEeeecceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccC----ceEEEEEecCcce
Q 024185 9 PITQALLFARQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTA----LEYGIFVLMLASF 84 (271)
Q Consensus 9 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~d----g~i~iwd~~~~~~ 84 (271)
|..+.++.+..++.+.+|+...+.. .....+.+|.+.|.+++|+|+++. +++++.+ +.|++|| +++.
T Consensus 69 pdg~~lasg~~d~~v~lWd~~~~~~--~~~~~~~~~~~~v~~v~fs~dg~~-----l~~~~~~~~~~~~v~~wd--~~~~ 139 (611)
T 1nr0_A 69 PSGYYCASGDVHGNVRIWDTTQTTH--ILKTTIPVFSGPVKDISWDSESKR-----IAAVGEGRERFGHVFLFD--TGTS 139 (611)
T ss_dssp TTSSEEEEEETTSEEEEEESSSTTC--CEEEEEECSSSCEEEEEECTTSCE-----EEEEECCSSCSEEEEETT--TCCB
T ss_pred CCCcEEEEEeCCCCEEEeECCCCcc--eeeEeecccCCceEEEEECCCCCE-----EEEEECCCCceeEEEEee--CCCC
Confidence 4455666677789999998754321 223457789999999999999998 6666654 4677776 5666
Q ss_pred eEEEecCC--cceEEEcCCCC-EEEEEecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEecCCeEE
Q 024185 85 QGILRLRG--RPTVAFDQQGL-VFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIY 161 (271)
Q Consensus 85 ~~~~~~~~--~~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~ 161 (271)
...+.+|. +.+++|+|++. .|++++.|++|++||..+.+. ...+.+|...|.+++|+|+|++|++++.|++|+
T Consensus 140 ~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~----~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~ 215 (611)
T 1nr0_A 140 NGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKF----KSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIV 215 (611)
T ss_dssp CBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEE----EEEECCCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred cceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeE----eeeeccccCceEEEEECCCCCEEEEEECCCcEE
Confidence 66777774 66799999987 699999999999999877654 567889999999999999999999999999999
Q ss_pred EEECCCCeEEEEee-------cCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCCceeEEE-----------------
Q 024185 162 VLDAYGGEKRCGFS-------LEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVAC----------------- 217 (271)
Q Consensus 162 ~~d~~~~~~~~~~~-------~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~----------------- 217 (271)
+||+.+++....+. .|.. .|.+++|+|++++|++++.|++|++||+.+++.+..
T Consensus 216 lwd~~~g~~~~~~~~~~~~~~~h~~--~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (611)
T 1nr0_A 216 LYNGVDGTKTGVFEDDSLKNVAHSG--SVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWT 293 (611)
T ss_dssp EEETTTCCEEEECBCTTSSSCSSSS--CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEEC
T ss_pred EEECCCCcEeeeeccccccccccCC--CEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEc
Confidence 99999999888774 4554 499999999999999999999999999988765443
Q ss_pred --------------------------ecCCcceeEEEEEecCCcEEEEeC--CeEEEEcCCCCCCCc
Q 024185 218 --------------------------WNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNPSSNST 256 (271)
Q Consensus 218 --------------------------~~~~~~~v~~~~~s~~~~~l~~~~--~~v~iw~~~~~~~~~ 256 (271)
+.+|...|.+++|+|+|++|++++ +.|++||+.+++...
T Consensus 294 ~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~ 360 (611)
T 1nr0_A 294 KQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNR 360 (611)
T ss_dssp SSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEE
T ss_pred CCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceee
Confidence 357888999999999999999998 889999999876543
No 33
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.8e-35 Score=233.30 Aligned_cols=207 Identities=15% Similarity=0.182 Sum_probs=169.5
Q ss_pred EEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCc--ceeEEE-ec-C--CcceEEEcCCCCEEEEEec
Q 024185 37 IIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLA--SFQGIL-RL-R--GRPTVAFDQQGLVFAVAME 110 (271)
Q Consensus 37 ~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~--~~~~~~-~~-~--~~~~~~~~~~~~~l~~~~~ 110 (271)
.++.+.+|.+.|.++.++|+ . |++++.|++|++||++++ +....+ .. | .+.+++|+|++++|++++.
T Consensus 6 ~~~~~~~h~~~v~~~~~s~~--~-----las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~ 78 (330)
T 2hes_X 6 LIKSLKLYKEKIWSFDFSQG--I-----LATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSF 78 (330)
T ss_dssp EEEEEECCSSCEEEEEEETT--E-----EEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEET
T ss_pred cceeeccCCCceeeeccCCC--E-----EEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeC
Confidence 44568899999999999987 5 889999999999999875 344555 23 5 4677999999999999999
Q ss_pred CCeEEEEeCCCCCC---CcceEEEecCCccceEEEEEcCCCcEEEEEecCCeEEEEECCC----CeEEEEeecCCCCCce
Q 024185 111 AGAIKLFDSRSYDK---GPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYG----GEKRCGFSLEPSPNTN 183 (271)
Q Consensus 111 d~~i~i~d~~~~~~---~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~~----~~~~~~~~~~~~~~~v 183 (271)
|+.|++||++.... .......+.+|...|.+++|+|++++|++++.|++|++||++. .+++..+..|... |
T Consensus 79 D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~--v 156 (330)
T 2hes_X 79 DSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQD--V 156 (330)
T ss_dssp TSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSC--E
T ss_pred CCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCc--e
Confidence 99999999864321 1123456789999999999999999999999999999999943 2556677777765 9
Q ss_pred eeEEECCCCCEEEEecCCCcEEEEEcCCc--eeEEEecCCcceeEEEEEecC--CcEEEEeC--CeEEEEcCCCC
Q 024185 184 TEATFTPDGQYVVSGSGDGTLHAWNINTR--NEVACWNGNIGVVACLKWAPR--RAMFVAAS--SVLSFWIPNPS 252 (271)
Q Consensus 184 ~~~~~~~~~~~l~~~~~dg~i~iwd~~~~--~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~--~~v~iw~~~~~ 252 (271)
.+++|+|++++|++++.|++|++||..++ +++..+.+|...|.+++|+|+ +.+|++++ +.|++||+.++
T Consensus 157 ~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~ 231 (330)
T 2hes_X 157 KHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGD 231 (330)
T ss_dssp EEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEE
T ss_pred EEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCC
Confidence 99999999999999999999999999876 678889999999999999998 67888887 88999998764
No 34
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=3.5e-36 Score=244.89 Aligned_cols=214 Identities=14% Similarity=0.184 Sum_probs=185.2
Q ss_pred EEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEecCC--cceEEEcCCCCEEEEEecCCe
Q 024185 36 MIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILRLRG--RPTVAFDQQGLVFAVAMEAGA 113 (271)
Q Consensus 36 ~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~d~~ 113 (271)
...+.+.+|.+.|.+++|+|++++ |++|+.||+|++||..+++....+..|. +.+++|+|++++|++|+.|+.
T Consensus 57 ~~~~~l~gH~~~V~~~~~sp~~~~-----l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~ 131 (380)
T 3iz6_a 57 VCCRTLQGHSGKVYSLDWTPEKNW-----IVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSA 131 (380)
T ss_dssp EEEEEECCCSSCEEEEEECTTSSC-----EEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSC
T ss_pred EEeecccccccEEEEEEEcCCCCE-----EEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCc
Confidence 455678999999999999999998 8999999999999999999999998875 566999999999999999999
Q ss_pred EEEEeCCCCCC---CcceEEEecCCccceEEEEEcCC-CcEEEEEecCCeEEEEECCCCeEEEEe-----ecCCCCCcee
Q 024185 114 IKLFDSRSYDK---GPFDTFLVGGDTAEVCDIKFSND-GKSMLLTTTNNNIYVLDAYGGEKRCGF-----SLEPSPNTNT 184 (271)
Q Consensus 114 i~i~d~~~~~~---~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~d~~i~~~d~~~~~~~~~~-----~~~~~~~~v~ 184 (271)
+++||+.+... .......+.+|.+.+.++.|+|+ +..|++++.|++|++||+++++.+..+ ..|. ..+.
T Consensus 132 v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~--~~v~ 209 (380)
T 3iz6_a 132 CSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHT--ADVL 209 (380)
T ss_dssp CEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCC--SCEE
T ss_pred EEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCc--cCeE
Confidence 99999875321 01123446789999999999996 457999999999999999999988776 3344 3499
Q ss_pred eEEECC-CCCEEEEecCCCcEEEEEcC-CceeEEEecCCcceeEEEEEecCCcEEEEeC--CeEEEEcCCCCCCCc
Q 024185 185 EATFTP-DGQYVVSGSGDGTLHAWNIN-TRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNPSSNST 256 (271)
Q Consensus 185 ~~~~~~-~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~~v~iw~~~~~~~~~ 256 (271)
+++|+| +++++++|+.|+.|++||++ .++.+..+.+|.+.|.+++|+|++++|++++ +.|++||+++++...
T Consensus 210 ~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~ 285 (380)
T 3iz6_a 210 SLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQ 285 (380)
T ss_dssp EEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEE
T ss_pred EEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEE
Confidence 999977 88999999999999999998 5678889999999999999999999999998 889999999876543
No 35
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1.3e-34 Score=234.40 Aligned_cols=234 Identities=12% Similarity=0.040 Sum_probs=199.8
Q ss_pred ecceeEEeeecceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEE
Q 024185 9 PITQALLFARQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGIL 88 (271)
Q Consensus 9 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 88 (271)
|..+.++.+..++.+..++...+. ......+.+|...+.+++|+|+++. +++++.||.|++||+++++....+
T Consensus 18 ~~~~~l~~~~~d~~v~i~~~~~~~--~~~~~~~~~h~~~v~~~~~~~~~~~-----l~~~~~dg~i~vwd~~~~~~~~~~ 90 (372)
T 1k8k_C 18 KDRTQIAICPNNHEVHIYEKSGNK--WVQVHELKEHNGQVTGVDWAPDSNR-----IVTCGTDRNAYVWTLKGRTWKPTL 90 (372)
T ss_dssp TTSSEEEEECSSSEEEEEEEETTE--EEEEEEEECCSSCEEEEEEETTTTE-----EEEEETTSCEEEEEEETTEEEEEE
T ss_pred CCCCEEEEEeCCCEEEEEeCCCCc--EEeeeeecCCCCcccEEEEeCCCCE-----EEEEcCCCeEEEEECCCCeeeeeE
Confidence 444566667789999999987762 1245667889999999999999998 889999999999999988755554
Q ss_pred --ecC--CcceEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEecCCeEEEEE
Q 024185 89 --RLR--GRPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLD 164 (271)
Q Consensus 89 --~~~--~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d 164 (271)
..+ .+.+++|+|++++|++++.|+.|++||++..+..........+|...|.+++|+|++++|++++.|+.|++||
T Consensus 91 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d 170 (372)
T 1k8k_C 91 VILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFS 170 (372)
T ss_dssp ECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred EeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEE
Confidence 333 4677999999999999999999999999887631112333467889999999999999999999999999999
Q ss_pred C------------------CCCeEEEEeecCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCCceeEEEecCCcceeE
Q 024185 165 A------------------YGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVA 226 (271)
Q Consensus 165 ~------------------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~ 226 (271)
+ ..++.+..+..+... +.+++|+|+++++++++.||.|++||+++++.+..+..|...|.
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~ 248 (372)
T 1k8k_C 171 AYIKEVEERPAPTPWGSKMPFGELMFESSSSCGW--VHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLL 248 (372)
T ss_dssp CCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSC--EEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEE
T ss_pred cccccccccccccccccccchhhheEecCCCCCe--EEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccCCCCeE
Confidence 5 467778888766655 99999999999999999999999999999999999999999999
Q ss_pred EEEEecCCcEEEEeC-CeEEEEcCCC
Q 024185 227 CLKWAPRRAMFVAAS-SVLSFWIPNP 251 (271)
Q Consensus 227 ~~~~s~~~~~l~~~~-~~v~iw~~~~ 251 (271)
+++|+|+++++++++ +.+++|++..
T Consensus 249 ~~~~~~~~~~l~~~~d~~i~i~~~~~ 274 (372)
T 1k8k_C 249 AVTFITESSLVAAGHDCFPVLFTYDS 274 (372)
T ss_dssp EEEEEETTEEEEEETTSSCEEEEEET
T ss_pred EEEEecCCCEEEEEeCCeEEEEEccC
Confidence 999999999999988 8899999987
No 36
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=3.6e-35 Score=233.12 Aligned_cols=233 Identities=12% Similarity=0.104 Sum_probs=188.2
Q ss_pred ecceeEEeeecceeeEEEEeeccceeeEEEEEcccccceEEeeEEec--CCchhhhhhhhhhccCceEEEEEecCcc--e
Q 024185 9 PITQALLFARQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSA--CLQLMIALCLVLLTTALEYGIFVLMLAS--F 84 (271)
Q Consensus 9 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~--~~~~~~~~~l~s~~~dg~i~iwd~~~~~--~ 84 (271)
|..+.|+.+..++.+.+++...+. ...+..+.+|.+.|.+++|++ +++. |++++.|++|++||+++++ .
T Consensus 23 ~~g~~lasgs~D~~v~lwd~~~~~--~~~~~~l~gH~~~V~~v~~~~~~~~~~-----l~s~s~D~~v~iWd~~~~~~~~ 95 (316)
T 3bg1_A 23 YYGTRLATCSSDRSVKIFDVRNGG--QILIADLRGHEGPVWQVAWAHPMYGNI-----LASCSYDRKVIIWREENGTWEK 95 (316)
T ss_dssp GGGCEEEEEETTTEEEEEEEETTE--EEEEEEEECCSSCEEEEEECCGGGSSC-----EEEEETTSCEEEECCSSSCCCE
T ss_pred CCCCEEEEEeCCCeEEEEEecCCC--cEEEEEEcCCCccEEEEEeCCCCCCCE-----EEEEECCCEEEEEECCCCcceE
Confidence 445566677779999999987652 223456889999999999976 3677 8899999999999998874 4
Q ss_pred eEEEecCC--cceEEEcCC--CCEEEEEecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCC-------------
Q 024185 85 QGILRLRG--RPTVAFDQQ--GLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSND------------- 147 (271)
Q Consensus 85 ~~~~~~~~--~~~~~~~~~--~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~------------- 147 (271)
...+.+|. +.+++|+|+ +.+|++++.|+.|++||++.... ......+.+|...+.+++|+|+
T Consensus 96 ~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~ 174 (316)
T 3bg1_A 96 SHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQ-WEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQ 174 (316)
T ss_dssp EEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSC-EEECCBTTSSSSCBCCCEECCCCCC------CCSC
T ss_pred EEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCC-cceeeeeccccCCcceEEEccccCCcccccccccc
Confidence 55666664 677999998 78999999999999999987542 0112345688999999999997
Q ss_pred ----CcEEEEEecCCeEEEEECCCC---eEEEEeecCCCCCceeeEEECCCC----CEEEEecCCCcEEEEEcCCc---e
Q 024185 148 ----GKSMLLTTTNNNIYVLDAYGG---EKRCGFSLEPSPNTNTEATFTPDG----QYVVSGSGDGTLHAWNINTR---N 213 (271)
Q Consensus 148 ----~~~l~~~~~d~~i~~~d~~~~---~~~~~~~~~~~~~~v~~~~~~~~~----~~l~~~~~dg~i~iwd~~~~---~ 213 (271)
+++|++++.|+.|++||++.+ +....+..|... |.+++|+|++ ++|++++.|++|++||+.+. +
T Consensus 175 ~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~--V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~ 252 (316)
T 3bg1_A 175 KPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDW--VRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNT 252 (316)
T ss_dssp CCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSC--EEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCC
T ss_pred CccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCc--eEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccc
Confidence 478999999999999999765 456667777665 9999999986 89999999999999999762 1
Q ss_pred -eEEEecCCcceeEEEEEecCCcEEEEeC--CeEEEEcCCC
Q 024185 214 -EVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNP 251 (271)
Q Consensus 214 -~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~~v~iw~~~~ 251 (271)
....+..|...|.+++|+|++++|++++ +.|++|+...
T Consensus 253 ~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~~ 293 (316)
T 3bg1_A 253 WSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESV 293 (316)
T ss_dssp CBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEECT
T ss_pred hhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEECC
Confidence 2234556888999999999999999987 8899999763
No 37
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=6.1e-35 Score=240.24 Aligned_cols=232 Identities=14% Similarity=0.152 Sum_probs=194.1
Q ss_pred ecceeEEeeecceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEE
Q 024185 9 PITQALLFARQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGIL 88 (271)
Q Consensus 9 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 88 (271)
|..+.++.+..++.+..++...+... ..+..+ ..+...+++|+++. +++++.||.|++||+++++....+
T Consensus 66 ~~g~~l~~~~~d~~v~i~d~~~~~~~----~~~~~~-~~~~~~~~~~~~~~-----l~~~~~dg~i~iwd~~~~~~~~~~ 135 (420)
T 3vl1_A 66 KVGSHLYKARLDGHDFLFNTIIRDGS----KMLKRA-DYTAVDTAKLQMRR-----FILGTTEGDIKVLDSNFNLQREID 135 (420)
T ss_dssp EEETTEEEEEETTEEEEEECCSEETT----TTSCSC-CEEEEEEECSSSCE-----EEEEETTSCEEEECTTSCEEEEET
T ss_pred ecCCeEEEEEcCCcEEEEEeccccee----eEEecC-CceEEEEEecCCCE-----EEEEECCCCEEEEeCCCcceeeec
Confidence 44456777777889998887655221 123344 45556678999998 889999999999999999888877
Q ss_pred ecCC--cceEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEecCCeEEEEECC
Q 024185 89 RLRG--RPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAY 166 (271)
Q Consensus 89 ~~~~--~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~ 166 (271)
..|. +.+++|+|++++|++++.|+.|++||+++++. ...+.+|...|.+++|+|++++|++++.|+.|++||++
T Consensus 136 ~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~----~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~ 211 (420)
T 3vl1_A 136 QAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSN----PRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECG 211 (420)
T ss_dssp TSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCC----CEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETT
T ss_pred ccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcC----ceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECC
Confidence 6664 67799999999999999999999999998876 55677899999999999999999999999999999999
Q ss_pred CCeEEEEeecCCC----------------------CCceeeEEECCCCCEEEEecCCCcEEEEEcCCceeEEEec-CCcc
Q 024185 167 GGEKRCGFSLEPS----------------------PNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWN-GNIG 223 (271)
Q Consensus 167 ~~~~~~~~~~~~~----------------------~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~ 223 (271)
+++.+..+..+.. ...+.+++|+|+++++++++.||.|++||+++++.+..+. .|..
T Consensus 212 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 291 (420)
T 3vl1_A 212 TGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTC 291 (420)
T ss_dssp TTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSS
T ss_pred CCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCC
Confidence 9999888875431 1235667779999999999999999999999998877774 5788
Q ss_pred eeEEEEEecCCc-EEEEeC--CeEEEEcCCCCCC
Q 024185 224 VVACLKWAPRRA-MFVAAS--SVLSFWIPNPSSN 254 (271)
Q Consensus 224 ~v~~~~~s~~~~-~l~~~~--~~v~iw~~~~~~~ 254 (271)
.|.+++|+|+++ +|++++ |.|++||+++++.
T Consensus 292 ~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~ 325 (420)
T 3vl1_A 292 SCNSLTVDGNNANYIYAGYENGMLAQWDLRSPEC 325 (420)
T ss_dssp CEEEEEECSSCTTEEEEEETTSEEEEEETTCTTS
T ss_pred CceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcC
Confidence 999999999998 888887 8899999988753
No 38
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=7.3e-34 Score=234.16 Aligned_cols=232 Identities=13% Similarity=0.147 Sum_probs=181.6
Q ss_pred eeEEeeecceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEecC
Q 024185 12 QALLFARQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILRLR 91 (271)
Q Consensus 12 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 91 (271)
..|.+++ ++.+.+|+..++.. ...-.+.+|...|.+++|+|+|++ |++|+.||.|++||+++++.+..+.+|
T Consensus 117 n~lAvgl-d~tV~lWd~~tg~~--~~~~~~~~~~~~V~sv~fspdg~~-----lasgs~Dg~v~iWd~~~~~~~~~~~~h 188 (420)
T 4gga_A 117 NVLAVAL-DNSVYLWSASSGDI--LQLLQMEQPGEYISSVAWIKEGNY-----LAVGTSSAEVQLWDVQQQKRLRNMTSH 188 (420)
T ss_dssp SEEEEEE-TTEEEEEETTTCCE--EEEEECCSTTCCEEEEEECTTSSE-----EEEEETTSCEEEEETTTTEEEEEECCC
T ss_pred CEEEEEe-CCEEEEEECCCCCE--EEEEEecCCCCcEEEEEECCCCCE-----EEEEECCCeEEEEEcCCCcEEEEEeCC
Confidence 3444444 88999999887732 222235677889999999999998 899999999999999999999999999
Q ss_pred CcceEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcceEEEec--------------------------------------
Q 024185 92 GRPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVG-------------------------------------- 133 (271)
Q Consensus 92 ~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~-------------------------------------- 133 (271)
.....++++++..+++|+.|+.+++||...... ....+.
T Consensus 189 ~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~---~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~ 265 (420)
T 4gga_A 189 SARVGSLSWNSYILSSGSRSGHIHHHDVRVAEH---HVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGG 265 (420)
T ss_dssp SSCEEEEEEETTEEEEEETTSEEEEEETTSSSC---EEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSC
T ss_pred CCceEEEeeCCCEEEEEeCCCceeEeeecccce---eeEEecccccceeeeeecCCCCeeeeeeccccceEEeecccccc
Confidence 877777777899999999999999999876432 112222
Q ss_pred --------CCccceEEEEEcCCCc-EEEEE--ecCCeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEec--C
Q 024185 134 --------GDTAEVCDIKFSNDGK-SMLLT--TTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGS--G 200 (271)
Q Consensus 134 --------~~~~~v~~~~~s~~~~-~l~~~--~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~ 200 (271)
.|...|.+++|+|++. .++++ +.|++|++||++++++...+..+.. +.++.|+|+++.+++++ .
T Consensus 266 ~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~---v~~~~~~~~~~~lv~~sg~~ 342 (420)
T 4gga_A 266 WVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQ---VCSILWSPHYKELISGHGFA 342 (420)
T ss_dssp SCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSC---EEEEEEETTTTEEEEEECTT
T ss_pred ceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccccc---eeeeeecCCCCeEEEEEecC
Confidence 3445666677776443 33332 3577777777777777766665443 88899999999888754 6
Q ss_pred CCcEEEEEcCCceeEEEecCCcceeEEEEEecCCcEEEEeC--CeEEEEcCCCCCCCcC
Q 024185 201 DGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNPSSNSTD 257 (271)
Q Consensus 201 dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~~v~iw~~~~~~~~~~ 257 (271)
|+.|++||+.+++++..+.+|.+.|++++|+|||++|++|+ ++|++||+........
T Consensus 343 d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~~~~~ 401 (420)
T 4gga_A 343 QNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELDPARR 401 (420)
T ss_dssp TCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCSSCC--
T ss_pred CCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCCccch
Confidence 89999999999999999999999999999999999999998 8899999977554433
No 39
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.6e-34 Score=252.24 Aligned_cols=235 Identities=16% Similarity=0.151 Sum_probs=198.4
Q ss_pred eEEeeecceeeEEEEeecccee-eEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEecC
Q 024185 13 ALLFARQNIILILLESLCGIYQ-CMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILRLR 91 (271)
Q Consensus 13 ~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 91 (271)
.++.+..++.+.+|+....... ....+.+.+|...|.+++++|++++ +++|+.||+|++||+.+++....+.+|
T Consensus 397 ~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~-----l~sgs~Dg~v~vwd~~~~~~~~~~~~h 471 (694)
T 3dm0_A 397 IIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQF-----ALSGSWDGELRLWDLAAGVSTRRFVGH 471 (694)
T ss_dssp EEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSE-----EEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred EEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCE-----EEEEeCCCcEEEEECCCCcceeEEeCC
Confidence 3445566899999987543221 2334568899999999999999998 899999999999999999999999888
Q ss_pred C--cceEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCC--cEEEEEecCCeEEEEECCC
Q 024185 92 G--RPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDG--KSMLLTTTNNNIYVLDAYG 167 (271)
Q Consensus 92 ~--~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~--~~l~~~~~d~~i~~~d~~~ 167 (271)
. +.+++|+|++++|++++.|++|++||...... ........+|...|.+++|+|++ ..+++++.|++|++||+++
T Consensus 472 ~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~ 550 (694)
T 3dm0_A 472 TKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECK-YTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSN 550 (694)
T ss_dssp SSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEE-EEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTT
T ss_pred CCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcc-eeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCC
Confidence 5 66799999999999999999999999865431 00001124688899999999986 5799999999999999999
Q ss_pred CeEEEEeecCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCCceeEEEecCCcceeEEEEEecCCcEEEEeC-CeEEE
Q 024185 168 GEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS-SVLSF 246 (271)
Q Consensus 168 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~~v~i 246 (271)
++....+..|... |.+++|+|+++++++++.||.|++||+++++.+..+.. ...|.+++|+|++.++++++ +.|++
T Consensus 551 ~~~~~~~~~h~~~--v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~-~~~v~~~~~sp~~~~l~~~~~~~i~i 627 (694)
T 3dm0_A 551 CKLRSTLAGHTGY--VSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEA-NSVIHALCFSPNRYWLCAATEHGIKI 627 (694)
T ss_dssp CCEEEEECCCSSC--EEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBC-SSCEEEEEECSSSSEEEEEETTEEEE
T ss_pred CcEEEEEcCCCCC--EEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecC-CCcEEEEEEcCCCcEEEEEcCCCEEE
Confidence 9999888888766 99999999999999999999999999999999888864 45799999999999998887 88999
Q ss_pred EcCCCCCCCc
Q 024185 247 WIPNPSSNST 256 (271)
Q Consensus 247 w~~~~~~~~~ 256 (271)
||+++++...
T Consensus 628 wd~~~~~~~~ 637 (694)
T 3dm0_A 628 WDLESKSIVE 637 (694)
T ss_dssp EETTTTEEEE
T ss_pred EECCCCCChh
Confidence 9999876544
No 40
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.4e-35 Score=240.76 Aligned_cols=231 Identities=12% Similarity=0.040 Sum_probs=182.7
Q ss_pred cceeEEeeecceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcc---eeE
Q 024185 10 ITQALLFARQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLAS---FQG 86 (271)
Q Consensus 10 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~---~~~ 86 (271)
....++.+..++.+.+++...+. ......+.+|.+.+.+++|+|++++ |++++.|+.|++||+++++ ...
T Consensus 22 ~g~~l~~~~~d~~i~iw~~~~~~--~~~~~~~~~h~~~v~~~~~s~~~~~-----l~s~s~d~~v~vwd~~~~~~~~~~~ 94 (377)
T 3dwl_C 22 QRTEFVTTTATNQVELYEQDGNG--WKHARTFSDHDKIVTCVDWAPKSNR-----IVTCSQDRNAYVYEKRPDGTWKQTL 94 (377)
T ss_dssp SSSEEECCCSSSCBCEEEEETTE--EEECCCBCCCSSCEEEEEECTTTCC-----EEEEETTSSEEEC------CCCCEE
T ss_pred CCCEEEEecCCCEEEEEEccCCc--eEEEEEEecCCceEEEEEEeCCCCE-----EEEEeCCCeEEEEEcCCCCceeeee
Confidence 33455666678999999887652 1334558899999999999999998 8999999999999999877 555
Q ss_pred EEecCC--cceEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcceEEEecC-CccceEEEEEcCCCcEEEEEecCCeEEEE
Q 024185 87 ILRLRG--RPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGG-DTAEVCDIKFSNDGKSMLLTTTNNNIYVL 163 (271)
Q Consensus 87 ~~~~~~--~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~d~~i~~~ 163 (271)
.+..|. +.+++|+|++++|++++.|+.|++||+++++.. .....+.+ |...|.+++|+|++++|++++.|+.|++|
T Consensus 95 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw 173 (377)
T 3dwl_C 95 VLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDW-WVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVL 173 (377)
T ss_dssp ECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----C-CCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEE
T ss_pred EecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccc-eeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEE
Confidence 565554 667999999999999999999999999887521 11344555 99999999999999999999999999999
Q ss_pred ECC------------------CCeEEEEeecCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCCcee----EEEecCC
Q 024185 164 DAY------------------GGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNE----VACWNGN 221 (271)
Q Consensus 164 d~~------------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~----~~~~~~~ 221 (271)
|++ .++++..+ .|.. .+.+++|+|++++|++++.||.|++||+++++. +..+.+|
T Consensus 174 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~ 250 (377)
T 3dwl_C 174 SAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGG--WVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLS 250 (377)
T ss_dssp EECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSS--SEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECS
T ss_pred EEEecccCCCccccccccccchhhhhhcc-cCCc--eEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCC
Confidence 985 24455555 4554 499999999999999999999999999999887 7788899
Q ss_pred cceeEEEEEecCCcEEEEeC-CeEEEEcCCC
Q 024185 222 IGVVACLKWAPRRAMFVAAS-SVLSFWIPNP 251 (271)
Q Consensus 222 ~~~v~~~~~s~~~~~l~~~~-~~v~iw~~~~ 251 (271)
...|.+++|+|++++|++++ +.+.+|+...
T Consensus 251 ~~~v~~~~~s~~~~~l~~~~~~~~~~~~~~~ 281 (377)
T 3dwl_C 251 QLPLRSLLWANESAIVAAGYNYSPILLQGNE 281 (377)
T ss_dssp SSCEEEEEEEETTEEEEEESSSSEEEECCCC
T ss_pred CCceEEEEEcCCCCEEEEEcCCcEEEEEeCC
Confidence 99999999999999999998 6677888763
No 41
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.6e-35 Score=247.77 Aligned_cols=225 Identities=11% Similarity=0.081 Sum_probs=184.0
Q ss_pred cceeeEEEEeeccceeeEEEEEcccccceEEeeEEecC------CchhhhhhhhhhccCceEEEEEecCcce--------
Q 024185 19 QNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSAC------LQLMIALCLVLLTTALEYGIFVLMLASF-------- 84 (271)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~------~~~~~~~~l~s~~~dg~i~iwd~~~~~~-------- 84 (271)
.++.+.+|+...+.........+.+|.+.|..++|+|+ +.+ |++++.||+|++||+.++..
T Consensus 181 ~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~-----LAs~s~DgtvrlWd~~~~~~~~~~~~~~ 255 (524)
T 2j04_B 181 HSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGC-----LSFVSQEGTINFLEIIDNATDVHVFKMC 255 (524)
T ss_dssp -CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCE-----EEEEETTSCEEEEECCCCSSSSSEEECC
T ss_pred CCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCce-----EEEEecCCeEEEEEcCCCccccccceee
Confidence 46778888866553322223346678889999999997 345 88999999999999976642
Q ss_pred ---eEEEecCC--cceEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcceEEEecCCccceEEE--EEcCCC-cEEEEEec
Q 024185 85 ---QGILRLRG--RPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDI--KFSNDG-KSMLLTTT 156 (271)
Q Consensus 85 ---~~~~~~~~--~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~--~~s~~~-~~l~~~~~ 156 (271)
...+.+|. +.+++|++++ .|++|+.||+|++||+++++. ....+.+|...|.++ +|+|++ ++|++++.
T Consensus 256 ~~p~~~l~~h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~~---~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~ 331 (524)
T 2j04_B 256 EKPSLTLSLADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTDPEV---PSFYDQVHDSYILSVSTAYSDFEDTVVSTVAV 331 (524)
T ss_dssp CSCSEEECCTTTCEEEEEESSSS-EEEEEETTSEEEEEETTBCSS---CSEEEECSSSCEEEEEEECCTTSCCEEEEEET
T ss_pred cCceEEEEcCCCCEEEEEecCCC-eEEEEeCCCEEEEEECCCCCC---ceEEeecccccEEEEEEEcCCCCCeEEEEecc
Confidence 23555554 5679999864 799999999999999987642 134467899999999 578887 89999999
Q ss_pred CCeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCCceeEEEecCCcceeEEEEEecCCcE
Q 024185 157 NNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAM 236 (271)
Q Consensus 157 d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 236 (271)
|++|++||+++++++..+..+.....+.+++|+|+++.+++++.|++|++||++++.++..+.+|.+.|++++|+|+|++
T Consensus 332 D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~ 411 (524)
T 2j04_B 332 DGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPM 411 (524)
T ss_dssp TSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCB
T ss_pred CCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCe
Confidence 99999999999887777766654334788999999999999999999999999999988889899999999999999999
Q ss_pred EEEeC--CeEEEEcCCCC
Q 024185 237 FVAAS--SVLSFWIPNPS 252 (271)
Q Consensus 237 l~~~~--~~v~iw~~~~~ 252 (271)
|++|+ ++|++||+..+
T Consensus 412 l~Sgs~Dgtv~lwd~~~~ 429 (524)
T 2j04_B 412 VLAGSADGSLIITNAARR 429 (524)
T ss_dssp CEEEETTTEEECCBSCSS
T ss_pred EEEEECCCEEEEEechHh
Confidence 99998 89999998765
No 42
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=7.7e-34 Score=227.19 Aligned_cols=241 Identities=10% Similarity=0.105 Sum_probs=198.4
Q ss_pred ecceeEEeeecceeeEEEEeeccceeeEEEEEcccccceEEeeEEec--CCchhhhhhhhhhccCceEEEEEecCc----
Q 024185 9 PITQALLFARQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSA--CLQLMIALCLVLLTTALEYGIFVLMLA---- 82 (271)
Q Consensus 9 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~--~~~~~~~~~l~s~~~dg~i~iwd~~~~---- 82 (271)
|....++.+..++.+..++...+.........+.+|...+.+++|+| +++. |++++.||.|++||++++
T Consensus 21 ~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~-----l~s~~~dg~v~vwd~~~~~~~~ 95 (351)
T 3f3f_A 21 FYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRI-----IASASYDKTVKLWEEDPDQEEC 95 (351)
T ss_dssp SSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSE-----EEEEETTSCEEEEEECTTSCTT
T ss_pred CCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCE-----EEEEcCCCeEEEEecCCCcccc
Confidence 44556777778999999998766544456677889999999999999 5777 889999999999999887
Q ss_pred -----ceeEEEecCC--cceEEEcCC--CCEEEEEecCCeEEEEeCCCCCCCcceE---------EEecCCccceEEEEE
Q 024185 83 -----SFQGILRLRG--RPTVAFDQQ--GLVFAVAMEAGAIKLFDSRSYDKGPFDT---------FLVGGDTAEVCDIKF 144 (271)
Q Consensus 83 -----~~~~~~~~~~--~~~~~~~~~--~~~l~~~~~d~~i~i~d~~~~~~~~~~~---------~~~~~~~~~v~~~~~ 144 (271)
+....+..|. +.+++|+|+ +++|++++.||.|++||+++++...... ....+|...+.+++|
T Consensus 96 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (351)
T 3f3f_A 96 SGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSW 175 (351)
T ss_dssp SSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEE
T ss_pred cccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEe
Confidence 4566666664 566999999 9999999999999999998876411111 011257788999999
Q ss_pred cCC---CcEEEEEecCCeEEEEECCCCeE--EEEeecCCCCCceeeEEECCCC----CEEEEecCCCcEEEEEcCCc---
Q 024185 145 SND---GKSMLLTTTNNNIYVLDAYGGEK--RCGFSLEPSPNTNTEATFTPDG----QYVVSGSGDGTLHAWNINTR--- 212 (271)
Q Consensus 145 s~~---~~~l~~~~~d~~i~~~d~~~~~~--~~~~~~~~~~~~v~~~~~~~~~----~~l~~~~~dg~i~iwd~~~~--- 212 (271)
+|+ +..+++++.++.+.+|+...++. ...+..|... |.+++|+|++ +++++++.||.|++||++++
T Consensus 176 ~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~--i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~ 253 (351)
T 3f3f_A 176 CPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSL--IRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSP 253 (351)
T ss_dssp CCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSC--EEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC--
T ss_pred ccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcc--eeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCc
Confidence 997 99999999999998888877765 4555555554 9999999998 89999999999999999865
Q ss_pred -------------------------------------------eeEEEecCCcceeEEEEEecCCcEEEEeC--CeEEEE
Q 024185 213 -------------------------------------------NEVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFW 247 (271)
Q Consensus 213 -------------------------------------------~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~~v~iw 247 (271)
+.+..+.+|...|++++|+|++++|++++ |.|++|
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw 333 (351)
T 3f3f_A 254 LASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLW 333 (351)
T ss_dssp -------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEE
T ss_pred cccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEE
Confidence 66777889999999999999999999998 889999
Q ss_pred cCCCCCCCc
Q 024185 248 IPNPSSNST 256 (271)
Q Consensus 248 ~~~~~~~~~ 256 (271)
++.+++...
T Consensus 334 ~~~~~~~~~ 342 (351)
T 3f3f_A 334 KATYSNEFK 342 (351)
T ss_dssp EECTTSCEE
T ss_pred ecCcCcchh
Confidence 999876443
No 43
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=5.5e-34 Score=232.79 Aligned_cols=231 Identities=15% Similarity=0.143 Sum_probs=192.7
Q ss_pred eeEEeeecceeeEEEEeecccee-eEEEEEcccc-----cceEEeeEEe----cCCchhhhhhhhhhccCceEEEEEecC
Q 024185 12 QALLFARQNIILILLESLCGIYQ-CMIIEFFATS-----KGIRRGLFLS----ACLQLMIALCLVLLTTALEYGIFVLML 81 (271)
Q Consensus 12 ~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-----~~~v~~~~~s----~~~~~~~~~~l~s~~~dg~i~iwd~~~ 81 (271)
..++.+..++.+..++...+... ......+..| ...+.++.|+ |+++.. +++++.||.|++||+++
T Consensus 82 ~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~----l~~~~~dg~i~iwd~~~ 157 (397)
T 1sq9_A 82 CLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHR----LVATDVKGTTYIWKFHP 157 (397)
T ss_dssp EEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEE----EEEEETTSCEEEEEEES
T ss_pred cEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceE----EEEEeCCCcEEEEeCCc
Confidence 55666677899999988776421 1114556777 5899999999 888762 45788999999999998
Q ss_pred ------cceeE-----EEec-------C--CcceEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcceEEEecC---C---
Q 024185 82 ------ASFQG-----ILRL-------R--GRPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGG---D--- 135 (271)
Q Consensus 82 ------~~~~~-----~~~~-------~--~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~---~--- 135 (271)
++.+. .+.+ + .+.+++|+|++ ++++++.||.|++||+++++. ...+.. |
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~----~~~~~~~~~h~~~ 232 (397)
T 1sq9_A 158 FADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRP----LYNFESQHSMINN 232 (397)
T ss_dssp SSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEE----EEEEECCC---CC
T ss_pred cccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCce----eEEEecccccccc
Confidence 76665 6643 3 46779999999 999999999999999998764 556667 8
Q ss_pred ccceEEEEEcCCCcEEEEEecC---CeEEEEECCCCeEEEEeec-------------CCCCCceeeEEECCCCCEEEEec
Q 024185 136 TAEVCDIKFSNDGKSMLLTTTN---NNIYVLDAYGGEKRCGFSL-------------EPSPNTNTEATFTPDGQYVVSGS 199 (271)
Q Consensus 136 ~~~v~~~~~s~~~~~l~~~~~d---~~i~~~d~~~~~~~~~~~~-------------~~~~~~v~~~~~~~~~~~l~~~~ 199 (271)
...+.+++|+|++++|++++.| +.|++||+++++.+..+.. |... +.+++|+|++++|++++
T Consensus 233 ~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--v~~~~~~~~~~~l~~~~ 310 (397)
T 1sq9_A 233 SNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSW--VMSLSFNDSGETLCSAG 310 (397)
T ss_dssp CCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSC--EEEEEECSSSSEEEEEE
T ss_pred CCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCc--EEEEEECCCCCEEEEEe
Confidence 8999999999999999999999 9999999999999998887 6655 99999999999999999
Q ss_pred CCCcEEEEEcCCceeEEEec------CC---------------cceeEEEEEecCC----------cEEEEeC--CeEEE
Q 024185 200 GDGTLHAWNINTRNEVACWN------GN---------------IGVVACLKWAPRR----------AMFVAAS--SVLSF 246 (271)
Q Consensus 200 ~dg~i~iwd~~~~~~~~~~~------~~---------------~~~v~~~~~s~~~----------~~l~~~~--~~v~i 246 (271)
.||.|++||+++++.+..+. +| ...|.+++|+|++ ++|++++ +.|++
T Consensus 311 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~i 390 (397)
T 1sq9_A 311 WDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRW 390 (397)
T ss_dssp TTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEE
T ss_pred CCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEE
Confidence 99999999999999999998 88 8999999999998 7898887 89999
Q ss_pred EcCCCCC
Q 024185 247 WIPNPSS 253 (271)
Q Consensus 247 w~~~~~~ 253 (271)
|++++++
T Consensus 391 w~~~~g~ 397 (397)
T 1sq9_A 391 FREAGGK 397 (397)
T ss_dssp EEEEC--
T ss_pred EEcCCCC
Confidence 9998764
No 44
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=2.9e-35 Score=233.69 Aligned_cols=203 Identities=13% Similarity=0.146 Sum_probs=167.9
Q ss_pred EcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcc--eeEEEecCC--cceEEEcC--CCCEEEEEecCCe
Q 024185 40 FFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLAS--FQGILRLRG--RPTVAFDQ--QGLVFAVAMEAGA 113 (271)
Q Consensus 40 ~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~--~~~~~~~~--~~~~l~~~~~d~~ 113 (271)
.+.+|.+.|.+++|+|++++ |++|+.|++|++||+++++ .+..+.+|. +.+++|+| ++++|++++.|++
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~-----lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~ 82 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTR-----LATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRK 82 (316)
T ss_dssp ------CCEEEEEECGGGCE-----EEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSC
T ss_pred ecccccCeEEEeeEcCCCCE-----EEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCE
Confidence 46789999999999999998 8999999999999998775 456778875 66699986 4899999999999
Q ss_pred EEEEeCCCCCCCcceEEEecCCccceEEEEEcCC--CcEEEEEecCCeEEEEECCCCeE---EEEeecCCCCCceeeEEE
Q 024185 114 IKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSND--GKSMLLTTTNNNIYVLDAYGGEK---RCGFSLEPSPNTNTEATF 188 (271)
Q Consensus 114 i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~d~~i~~~d~~~~~~---~~~~~~~~~~~~v~~~~~ 188 (271)
|++||+++++. .....+.+|...|.+++|+|+ +.+|++++.|+.|++||++++.. ...+..|... +.+++|
T Consensus 83 v~iWd~~~~~~--~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~--v~~~~~ 158 (316)
T 3bg1_A 83 VIIWREENGTW--EKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIG--CNAVSW 158 (316)
T ss_dssp EEEECCSSSCC--CEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSC--BCCCEE
T ss_pred EEEEECCCCcc--eEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCC--cceEEE
Confidence 99999987653 235567889999999999998 88999999999999999987632 2334445544 888999
Q ss_pred CCC-----------------CCEEEEecCCCcEEEEEcCCc---eeEEEecCCcceeEEEEEecCC----cEEEEeC--C
Q 024185 189 TPD-----------------GQYVVSGSGDGTLHAWNINTR---NEVACWNGNIGVVACLKWAPRR----AMFVAAS--S 242 (271)
Q Consensus 189 ~~~-----------------~~~l~~~~~dg~i~iwd~~~~---~~~~~~~~~~~~v~~~~~s~~~----~~l~~~~--~ 242 (271)
+|+ +++|++|+.|+.|++||++.. +.+..+.+|...|.+++|+|++ .+|++++ +
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~ 238 (316)
T 3bg1_A 159 APAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDG 238 (316)
T ss_dssp CCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTC
T ss_pred ccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCC
Confidence 997 478999999999999999755 4677789999999999999986 7899987 8
Q ss_pred eEEEEcCCC
Q 024185 243 VLSFWIPNP 251 (271)
Q Consensus 243 ~v~iw~~~~ 251 (271)
+|++|++++
T Consensus 239 ~v~iw~~~~ 247 (316)
T 3bg1_A 239 RVFIWTCDD 247 (316)
T ss_dssp EEEEEECSS
T ss_pred eEEEEEccC
Confidence 899999876
No 45
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-33 Score=228.21 Aligned_cols=232 Identities=10% Similarity=0.136 Sum_probs=192.5
Q ss_pred ecceeEEeeecceeeEEEEeeccceeeEEEEEcccccceEEeeEEecC--CchhhhhhhhhhccCceEEEEEecCcc--e
Q 024185 9 PITQALLFARQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSAC--LQLMIALCLVLLTTALEYGIFVLMLAS--F 84 (271)
Q Consensus 9 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~~~~~~l~s~~~dg~i~iwd~~~~~--~ 84 (271)
|..+.++.+..++.+..++...+. ......+.+|.+.+.+++|+++ +.+ |++++.||.|++||+++++ .
T Consensus 21 ~~~~~l~~~~~dg~i~iw~~~~~~--~~~~~~~~~h~~~v~~~~~~~~~~~~~-----l~s~~~dg~v~iwd~~~~~~~~ 93 (379)
T 3jrp_A 21 YYGKRLATCSSDKTIKIFEVEGET--HKLIDTLTGHEGPVWRVDWAHPKFGTI-----LASCSYDGKVLIWKEENGRWSQ 93 (379)
T ss_dssp SSSSEEEEEETTSCEEEEEEETTE--EEEEEEECCCSSCEEEEEECCGGGCSE-----EEEEETTSCEEEEEEETTEEEE
T ss_pred CCCCEEEEEECCCcEEEEecCCCc--ceeeeEecCCCCcEEEEEeCCCCCCCE-----EEEeccCCEEEEEEcCCCceeE
Confidence 455667777789999999886432 2445668899999999999977 777 8899999999999999987 5
Q ss_pred eEEEecC--CcceEEEcCC--CCEEEEEecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcC-------------C
Q 024185 85 QGILRLR--GRPTVAFDQQ--GLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSN-------------D 147 (271)
Q Consensus 85 ~~~~~~~--~~~~~~~~~~--~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~-------------~ 147 (271)
...+..| .+.+++|+|+ +++|++++.|+.|++||+.+... .....+.+|...|.+++|+| +
T Consensus 94 ~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 171 (379)
T 3jrp_A 94 IAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGT--TSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKE 171 (379)
T ss_dssp EEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSC--CCEEEEECCTTCEEEEEECCCC----------CT
T ss_pred eeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCc--eeeEEecCCCCceEEEEEcCccccccccccCCCC
Confidence 6666655 4677999999 99999999999999999988754 33556678999999999999 6
Q ss_pred CcEEEEEecCCeEEEEECCCCe----EEEEeecCCCCCceeeEEECCC---CCEEEEecCCCcEEEEEcCCce---eEEE
Q 024185 148 GKSMLLTTTNNNIYVLDAYGGE----KRCGFSLEPSPNTNTEATFTPD---GQYVVSGSGDGTLHAWNINTRN---EVAC 217 (271)
Q Consensus 148 ~~~l~~~~~d~~i~~~d~~~~~----~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~dg~i~iwd~~~~~---~~~~ 217 (271)
++++++++.|+.|++||+++++ ....+..|... +.+++|+|+ ++++++++.||.|++||++++. ....
T Consensus 172 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~--v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 249 (379)
T 3jrp_A 172 SRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDW--VRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTL 249 (379)
T ss_dssp TCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSC--EEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEE
T ss_pred CCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCc--EeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeee
Confidence 9999999999999999998764 34456666655 999999999 8999999999999999998864 2222
Q ss_pred e--cCCcceeEEEEEecCCcEEEEeC--CeEEEEcCCC
Q 024185 218 W--NGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNP 251 (271)
Q Consensus 218 ~--~~~~~~v~~~~~s~~~~~l~~~~--~~v~iw~~~~ 251 (271)
+ ..|...|.+++|+|++++|++++ |.|++|++..
T Consensus 250 ~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 250 LKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 287 (379)
T ss_dssp SSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEE
T ss_pred eccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCC
Confidence 2 34888999999999999999887 8899999874
No 46
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=6.3e-35 Score=241.55 Aligned_cols=194 Identities=8% Similarity=0.040 Sum_probs=153.3
Q ss_pred ecce-eEEeeecceeeEEEEeeccceeeEEEEEcccccceEEeeEEec-CCchhhhhhhhhhccCceEEEEEecCcceeE
Q 024185 9 PITQ-ALLFARQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSA-CLQLMIALCLVLLTTALEYGIFVLMLASFQG 86 (271)
Q Consensus 9 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~ 86 (271)
|... .|+.+..+|.+.+|+...+.. .....+.+|.+.|.+++|+| ++.. |++++.||+|++||++++....
T Consensus 129 P~~~~~lasGs~dg~i~lWd~~~~~~--~~~~~~~gH~~~V~~l~f~p~~~~~-----l~s~s~D~~v~iwd~~~~~~~~ 201 (435)
T 4e54_B 129 PTHPSTVAVGSKGGDIMLWNFGIKDK--PTFIKGIGAGGSITGLKFNPLNTNQ-----FYASSMEGTTRLQDFKGNILRV 201 (435)
T ss_dssp SSCTTCEEEEETTSCEEEECSSCCSC--CEEECCCSSSCCCCEEEECSSCTTE-----EEEECSSSCEEEEETTSCEEEE
T ss_pred CCCCCEEEEEeCCCEEEEEECCCCCc--eeEEEccCCCCCEEEEEEeCCCCCE-----EEEEeCCCEEEEeeccCCceeE
Confidence 4344 455677899999998765532 22334678999999999998 5666 8899999999999998765443
Q ss_pred EEecCC----cceEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCc-EEEEEecCCeEE
Q 024185 87 ILRLRG----RPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGK-SMLLTTTNNNIY 161 (271)
Q Consensus 87 ~~~~~~----~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~d~~i~ 161 (271)
....+. +.+++|+|++++|++|+.||.|++||++... ...+.+|...|.+++|+|++. ++++++.|+.|+
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~-----~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~ 276 (435)
T 4e54_B 202 FASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKE-----LWNLRMHKKKVTHVALNPCCDWFLATASVDQTVK 276 (435)
T ss_dssp EECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCB-----CCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCC
T ss_pred EeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcce-----eEEEecccceEEeeeecCCCceEEEEecCcceee
Confidence 333332 3559999999999999999999999997644 445678999999999999876 677899999999
Q ss_pred EEECCCCeEEEEe---ecCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCCceeEE
Q 024185 162 VLDAYGGEKRCGF---SLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVA 216 (271)
Q Consensus 162 ~~d~~~~~~~~~~---~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 216 (271)
+||+++.+....+ ..|.. .|.+++|+|+|++|++++.||.|++||+.+++...
T Consensus 277 iwd~~~~~~~~~~~~~~~h~~--~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~ 332 (435)
T 4e54_B 277 IWDLRQVRGKASFLYSLPHRH--PVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPL 332 (435)
T ss_dssp EEETTTCCSSSCCSBCCBCSS--CEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEE
T ss_pred EEecccccccceEEEeeeccc--cccceeECCCCCeeEEEcCCCEEEEEECCCCccce
Confidence 9999887654433 33444 49999999999999999999999999987655433
No 47
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.9e-33 Score=225.83 Aligned_cols=232 Identities=11% Similarity=0.143 Sum_probs=193.6
Q ss_pred ecceeEEeeecceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEE
Q 024185 9 PITQALLFARQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGIL 88 (271)
Q Consensus 9 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 88 (271)
|....++.+..++.+..++...+ .....+.+|.+.+.+++|+|+++. +++++.||.|++||+++++.+..+
T Consensus 42 ~~~~~l~~~~~dg~i~vwd~~~~----~~~~~~~~h~~~v~~~~~~~~~~~-----l~s~~~dg~i~iwd~~~~~~~~~~ 112 (369)
T 3zwl_B 42 KEGDLLFSCSKDSSASVWYSLNG----ERLGTLDGHTGTIWSIDVDCFTKY-----CVTGSADYSIKLWDVSNGQCVATW 112 (369)
T ss_dssp TTSCEEEEEESSSCEEEEETTTC----CEEEEECCCSSCEEEEEECTTSSE-----EEEEETTTEEEEEETTTCCEEEEE
T ss_pred CCCCEEEEEeCCCEEEEEeCCCc----hhhhhhhhcCCcEEEEEEcCCCCE-----EEEEeCCCeEEEEECCCCcEEEEe
Confidence 44456666777899999987766 445668899999999999999998 889999999999999887765554
Q ss_pred ecC-------------------------------------------------------------CcceEEEcCCCCEEEE
Q 024185 89 RLR-------------------------------------------------------------GRPTVAFDQQGLVFAV 107 (271)
Q Consensus 89 ~~~-------------------------------------------------------------~~~~~~~~~~~~~l~~ 107 (271)
... .+.+++|+|++++|++
T Consensus 113 ~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 192 (369)
T 3zwl_B 113 KSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIA 192 (369)
T ss_dssp ECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEE
T ss_pred ecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEE
Confidence 311 2233666677777777
Q ss_pred EecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEecCCeEEEEECCCCeEEEEeecCCCCCceeeEE
Q 024185 108 AMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEAT 187 (271)
Q Consensus 108 ~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~ 187 (271)
++.||.|++||+++.. .....+..|...|.+++|+|++++|++++.|+.|++||+++++.+..+. +.. .+..++
T Consensus 193 ~~~dg~i~i~d~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~--~~~~~~ 266 (369)
T 3zwl_B 193 GHKDGKISKYDVSNNY---EYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE-TDC--PLNTAV 266 (369)
T ss_dssp EETTSEEEEEETTTTT---EEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE-CSS--CEEEEE
T ss_pred EcCCCEEEEEECCCCc---EeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeec-CCC--CceeEE
Confidence 7778888888887632 1255567789999999999999999999999999999999999888887 333 389999
Q ss_pred ECCCCCEEEEecCCC--------------cEEEEEcCCceeEEEecCCcceeEEEEEecCCcEEEEeC--CeEEEEcCCC
Q 024185 188 FTPDGQYVVSGSGDG--------------TLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNP 251 (271)
Q Consensus 188 ~~~~~~~l~~~~~dg--------------~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~~v~iw~~~~ 251 (271)
|+|+++++++++.++ .+++||..+++.+..+.+|...|.+++|+|++++|++++ |.|++|+++.
T Consensus 267 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~ 346 (369)
T 3zwl_B 267 ITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIRLHHFEK 346 (369)
T ss_dssp ECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEEECH
T ss_pred ecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEcCCCeEEEEECcc
Confidence 999999999999888 899999999999999999999999999999999999997 8899999987
Q ss_pred CCCC
Q 024185 252 SSNS 255 (271)
Q Consensus 252 ~~~~ 255 (271)
+...
T Consensus 347 ~~~~ 350 (369)
T 3zwl_B 347 SYFD 350 (369)
T ss_dssp HHHT
T ss_pred ccch
Confidence 6543
No 48
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=3.4e-33 Score=238.72 Aligned_cols=223 Identities=18% Similarity=0.252 Sum_probs=191.8
Q ss_pred ecceeEEeeecceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEE
Q 024185 9 PITQALLFARQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGIL 88 (271)
Q Consensus 9 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 88 (271)
|..+.++.+..++.+..++.... .+..+..|...+.+++++|+++. +++++.|+.+++||. +++.+..+
T Consensus 313 ~~~~~l~t~~~d~~i~~w~~~~~-----~~~~~~~~~~~v~~~~~s~~g~~-----l~~~~~dg~v~~~~~-~~~~~~~~ 381 (577)
T 2ymu_A 313 PDGQTIASASDDKTVKLWNRNGQ-----HLQTLTGHSSSVWGVAFSPDGQT-----IASASDDKTVKLWNR-NGQLLQTL 381 (577)
T ss_dssp TTSSEEEEEETTSCEEEEETTSC-----EEEEECCCSSCEEEEEECTTSSE-----EEEEETTSEEEEEET-TCCEEEEE
T ss_pred CCCCEEEEEeCCCeEEEEeCCCC-----eeEEEeCCCCCEEEEEECCCCCE-----EEEEeCCCEEEEEcC-CCCEEEEe
Confidence 34455666677888888874332 33457788999999999999998 889999999999996 67778888
Q ss_pred ecCC--cceEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEecCCeEEEEECC
Q 024185 89 RLRG--RPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAY 166 (271)
Q Consensus 89 ~~~~--~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~ 166 (271)
..|. +.+++|+|++++|++++.|+.|++||.. ++. ...+.+|...|.+++|+||+++|++++.|+.|++||.
T Consensus 382 ~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~-~~~----~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~- 455 (577)
T 2ymu_A 382 TGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-GQL----LQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNR- 455 (577)
T ss_dssp ECCSSCEEEEEECTTSSCEEEEETTSEEEEECTT-CCE----EEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET-
T ss_pred cCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCC-CCE----EEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEEC-
Confidence 7774 5679999999999999999999999964 333 5567789999999999999999999999999999995
Q ss_pred CCeEEEEeecCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCCceeEEEecCCcceeEEEEEecCCcEEEEeC--CeE
Q 024185 167 GGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVL 244 (271)
Q Consensus 167 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~~v 244 (271)
+++.+..+..|... +.+++|+|++++|++++.|+.|++||. +++.+..+.+|...|++++|+|++++|++++ +.|
T Consensus 456 ~~~~~~~~~~~~~~--v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v 532 (577)
T 2ymu_A 456 NGQLLQTLTGHSSS--VRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTV 532 (577)
T ss_dssp TSCEEEEEECCSSC--EEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEE
T ss_pred CCCEEEEEcCCCCC--EEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEE
Confidence 56777888887766 999999999999999999999999995 7889999999999999999999999999997 889
Q ss_pred EEEcCCC
Q 024185 245 SFWIPNP 251 (271)
Q Consensus 245 ~iw~~~~ 251 (271)
++||...
T Consensus 533 ~lwd~~~ 539 (577)
T 2ymu_A 533 KLWNRNG 539 (577)
T ss_dssp EEECTTS
T ss_pred EEEeCCC
Confidence 9999643
No 49
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.9e-35 Score=239.95 Aligned_cols=205 Identities=9% Similarity=0.037 Sum_probs=169.4
Q ss_pred cccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCc--ceeEEEecCC--cceEEEcCCCCEEEEEecCCeEEE
Q 024185 41 FATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLA--SFQGILRLRG--RPTVAFDQQGLVFAVAMEAGAIKL 116 (271)
Q Consensus 41 ~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~--~~~~~~~~~~--~~~~~~~~~~~~l~~~~~d~~i~i 116 (271)
+..+.+.|.+++|+|++++ +++++.|+.|++||+.++ +.+..+.+|. +.+++|+|++++|++++.|+.|++
T Consensus 7 ~~~~~~~v~~~~~s~~g~~-----l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~v 81 (377)
T 3dwl_C 7 LHILPKPSYEHAFNSQRTE-----FVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYV 81 (377)
T ss_dssp EEECSSCCSCCEECSSSSE-----EECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEE
T ss_pred EecCCCcEEEEEECCCCCE-----EEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEE
Confidence 4556778999999999998 889999999999999988 6777777774 667999999999999999999999
Q ss_pred EeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEecCCeEEEEECCCCeE---EEEeec-CCCCCceeeEEECCCC
Q 024185 117 FDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEK---RCGFSL-EPSPNTNTEATFTPDG 192 (271)
Q Consensus 117 ~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~~~~~---~~~~~~-~~~~~~v~~~~~~~~~ 192 (271)
||+.+++. ......+.+|...|.+++|+|++++|++++.|+.|++||+++++. ...+.. |... +.+++|+|++
T Consensus 82 wd~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~--v~~~~~~~~~ 158 (377)
T 3dwl_C 82 YEKRPDGT-WKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRST--ILSLDWHPNN 158 (377)
T ss_dssp C------C-CCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSC--EEEEEECTTS
T ss_pred EEcCCCCc-eeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCC--eEEEEEcCCC
Confidence 99988761 122566778999999999999999999999999999999998873 566665 5554 9999999999
Q ss_pred CEEEEecCCCcEEEEEcC------------------CceeEEEecCCcceeEEEEEecCCcEEEEeC--CeEEEEcCCCC
Q 024185 193 QYVVSGSGDGTLHAWNIN------------------TRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNPS 252 (271)
Q Consensus 193 ~~l~~~~~dg~i~iwd~~------------------~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~~v~iw~~~~~ 252 (271)
+++++++.|+.|++||+. .++++..+ +|...|.+++|+|++++|++++ +.|++||+.++
T Consensus 159 ~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~ 237 (377)
T 3dwl_C 159 VLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAP 237 (377)
T ss_dssp SEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECST
T ss_pred CEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCC
Confidence 999999999999999985 35566677 8999999999999999999997 88999999988
Q ss_pred CC
Q 024185 253 SN 254 (271)
Q Consensus 253 ~~ 254 (271)
+.
T Consensus 238 ~~ 239 (377)
T 3dwl_C 238 EQ 239 (377)
T ss_dssp TS
T ss_pred CC
Confidence 76
No 50
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=9.4e-33 Score=220.32 Aligned_cols=232 Identities=15% Similarity=0.126 Sum_probs=193.6
Q ss_pred eeEEeeecceeeEEEEeeccceee-EEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcc--eeEEE
Q 024185 12 QALLFARQNIILILLESLCGIYQC-MIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLAS--FQGIL 88 (271)
Q Consensus 12 ~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~--~~~~~ 88 (271)
..+++...++.+..++...+.... ........|...+.++.|+|+++. +++++.||.|++||+++++ ....+
T Consensus 63 ~~~l~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-----l~~~~~d~~i~~~d~~~~~~~~~~~~ 137 (337)
T 1gxr_A 63 TRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCT-----LIVGGEASTLSIWDLAAPTPRIKAEL 137 (337)
T ss_dssp SSEEEEECBSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSE-----EEEEESSSEEEEEECCCC--EEEEEE
T ss_pred CcEEEEcCCCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCE-----EEEEcCCCcEEEEECCCCCcceeeec
Confidence 334444448999999876553221 111223378899999999999998 8899999999999999877 45556
Q ss_pred ecCC--cceEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEecCCeEEEEECC
Q 024185 89 RLRG--RPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAY 166 (271)
Q Consensus 89 ~~~~--~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~ 166 (271)
..+. +.+++|+|+++++++++.||.|++||+++++. ...+.+|...+.+++|+|+++++++++.|+.|++||++
T Consensus 138 ~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~----~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~ 213 (337)
T 1gxr_A 138 TSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTL----VRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLR 213 (337)
T ss_dssp ECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE----EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred ccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCce----eeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECC
Confidence 6554 56799999999999999999999999998765 66677899999999999999999999999999999999
Q ss_pred CCeEEEEeecCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCCceeEEEecCCcceeEEEEEecCCcEEEEeC--CeE
Q 024185 167 GGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVL 244 (271)
Q Consensus 167 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~~v 244 (271)
+++.+..+. +.. .+.+++|+|+++++++++.++.|++||+++++.. .+..|...|.+++|+|++++|++++ +.+
T Consensus 214 ~~~~~~~~~-~~~--~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i 289 (337)
T 1gxr_A 214 EGRQLQQHD-FTS--QIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKY-QLHLHESCVLSLKFAYCGKWFVSTGKDNLL 289 (337)
T ss_dssp TTEEEEEEE-CSS--CEEEEEECTTSSEEEEEETTSCEEEEETTSSCEE-EECCCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred CCceEeeec-CCC--ceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeE-EEcCCccceeEEEECCCCCEEEEecCCCcE
Confidence 999888775 333 3999999999999999999999999999987754 5678999999999999999999997 889
Q ss_pred EEEcCCCCCCCc
Q 024185 245 SFWIPNPSSNST 256 (271)
Q Consensus 245 ~iw~~~~~~~~~ 256 (271)
++||+++++...
T Consensus 290 ~~~~~~~~~~~~ 301 (337)
T 1gxr_A 290 NAWRTPYGASIF 301 (337)
T ss_dssp EEEETTTCCEEE
T ss_pred EEEECCCCeEEE
Confidence 999999887653
No 51
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=5.6e-33 Score=220.10 Aligned_cols=230 Identities=13% Similarity=0.118 Sum_probs=185.7
Q ss_pred EEeeecceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEecCC-
Q 024185 14 LLFARQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILRLRG- 92 (271)
Q Consensus 14 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~- 92 (271)
++....++.+.+|+..++.. ...-.+.+|...|.+++|+|++++ +++|+.||+|++||+++++.+..+.+|.
T Consensus 38 ~lAvg~D~tV~iWd~~tg~~--~~~~~~~~~~~~V~~v~~~~~~~~-----l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~ 110 (318)
T 4ggc_A 38 VLAVALDNSVYLWSASSGDI--LQLLQMEQPGEYISSVAWIKEGNY-----LAVGTSSAEVQLWDVQQQKRLRNMTSHSA 110 (318)
T ss_dssp EEEEEETTEEEEEETTTCCE--EEEEECCSTTCCEEEEEECTTSSE-----EEEEETTSEEEEEETTTTEEEEEEECCSS
T ss_pred EEEEEeCCEEEEEECCCCCE--EEEEEecCCCCeEEEEEECCCCCE-----EEEEECCCcEEEeecCCceeEEEecCccc
Confidence 44444588999999877722 222235678889999999999998 8999999999999999887766554331
Q ss_pred ------------------------------------------cceEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcceEE
Q 024185 93 ------------------------------------------RPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTF 130 (271)
Q Consensus 93 ------------------------------------------~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 130 (271)
+..+.++++++++++++.|+.|++||+++++.......
T Consensus 111 ~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~ 190 (318)
T 4ggc_A 111 RVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQ 190 (318)
T ss_dssp CEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSE
T ss_pred eEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCccccccee
Confidence 23367888999999999999999999988765334455
Q ss_pred EecCCccceEEEEEcCCCcEE---EEEecCCeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEec--CCCcEE
Q 024185 131 LVGGDTAEVCDIKFSNDGKSM---LLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGS--GDGTLH 205 (271)
Q Consensus 131 ~~~~~~~~v~~~~~s~~~~~l---~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~dg~i~ 205 (271)
....+.+.|.+++++|++..+ ++++.++.|++||.+........... .. +..+.|+|+++.+++++ .|+.|+
T Consensus 191 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~-~~--v~~~~~~~~~~~~~~~sg~~d~~i~ 267 (318)
T 4ggc_A 191 TFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAH-SQ--VCSILWSPHYKELISGHGFAQNQLV 267 (318)
T ss_dssp EECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECS-SC--EEEEEEETTTTEEEEEECTTTCCEE
T ss_pred eecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccce-ee--eeeeeecccccceEEEEEcCCCEEE
Confidence 566788899999999976543 34567899999999988876665433 33 88899999999887654 799999
Q ss_pred EEEcCCceeEEEecCCcceeEEEEEecCCcEEEEeC--CeEEEEcCCCCC
Q 024185 206 AWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNPSS 253 (271)
Q Consensus 206 iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~~v~iw~~~~~~ 253 (271)
+||+++++++..+.+|.+.|++++|+|+|++|++++ ++|++||+....
T Consensus 268 iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 268 IWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELD 317 (318)
T ss_dssp EEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCCC
T ss_pred EEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCC
Confidence 999999999999999999999999999999999998 899999986543
No 52
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=6.1e-34 Score=232.52 Aligned_cols=240 Identities=9% Similarity=0.023 Sum_probs=198.2
Q ss_pred eeEEeeecceeeEEEEeeccce--eeEEEEEcccccceEEeeEEecC----C---chhhhhhhhhhccCceEEEEEecCc
Q 024185 12 QALLFARQNIILILLESLCGIY--QCMIIEFFATSKGIRRGLFLSAC----L---QLMIALCLVLLTTALEYGIFVLMLA 82 (271)
Q Consensus 12 ~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~v~~~~~s~~----~---~~~~~~~l~s~~~dg~i~iwd~~~~ 82 (271)
..++.+..++.+..++...+.. .......+..|...+.++.|+|+ + +. +++++.||.|++||++++
T Consensus 27 ~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~-----l~s~~~dg~i~iw~~~~~ 101 (397)
T 1sq9_A 27 SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCL-----VATTSFSGDLLFYRITRE 101 (397)
T ss_dssp SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEE-----EEEEETTSCEEEEEEEEC
T ss_pred CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccE-----EEEEcCCCCEEEEEccCC
Confidence 5566667789999999877630 00123446689999999999999 8 87 889999999999999988
Q ss_pred ce-----eEEEecC-------CcceEEEc----CCCCE-EEEEecCCeEEEEeCCC------CCCCcc-eEEEe------
Q 024185 83 SF-----QGILRLR-------GRPTVAFD----QQGLV-FAVAMEAGAIKLFDSRS------YDKGPF-DTFLV------ 132 (271)
Q Consensus 83 ~~-----~~~~~~~-------~~~~~~~~----~~~~~-l~~~~~d~~i~i~d~~~------~~~~~~-~~~~~------ 132 (271)
+. ...+..+ .+.+++|+ |++++ |++++.||.|++||+.+ .+.... ....+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (397)
T 1sq9_A 102 DETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVES 181 (397)
T ss_dssp TTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECC
T ss_pred cccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeecc
Confidence 86 7777655 35679999 99999 99999999999999987 543110 01133
Q ss_pred -cCCccceEEEEEcCCCcEEEEEecCCeEEEEECCCCeEEEEeec---C---CCCCceeeEEECCCCCEEEEecCC---C
Q 024185 133 -GGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSL---E---PSPNTNTEATFTPDGQYVVSGSGD---G 202 (271)
Q Consensus 133 -~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~---~---~~~~~v~~~~~~~~~~~l~~~~~d---g 202 (271)
..|...+.+++|+|++ ++++++.|+.|++||+++++.+..+.. | ... +.+++|+|+++++++++.| |
T Consensus 182 ~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~--i~~i~~~~~~~~l~~~~~d~~~g 258 (397)
T 1sq9_A 182 PMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNS--IRSVKFSPQGSLLAIAHDSNSFG 258 (397)
T ss_dssp SSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCC--EEEEEECSSTTEEEEEEEETTEE
T ss_pred ccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCc--cceEEECCCCCEEEEEecCCCCc
Confidence 4588899999999999 999999999999999999999998887 6 544 9999999999999999999 9
Q ss_pred cEEEEEcCCceeEEEecC-------------CcceeEEEEEecCCcEEEEeC--CeEEEEcCCCCCCCcCCC
Q 024185 203 TLHAWNINTRNEVACWNG-------------NIGVVACLKWAPRRAMFVAAS--SVLSFWIPNPSSNSTDES 259 (271)
Q Consensus 203 ~i~iwd~~~~~~~~~~~~-------------~~~~v~~~~~s~~~~~l~~~~--~~v~iw~~~~~~~~~~~~ 259 (271)
.|++||+++++.+..+.+ |...|.+++|+|++++|++++ +.|++||+.+++......
T Consensus 259 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 330 (397)
T 1sq9_A 259 CITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLN 330 (397)
T ss_dssp EEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred eEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEe
Confidence 999999999999999988 999999999999999999997 889999999877655443
No 53
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=7.7e-34 Score=233.65 Aligned_cols=229 Identities=14% Similarity=0.141 Sum_probs=189.5
Q ss_pred ecceeEEeeecceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEE
Q 024185 9 PITQALLFARQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGIL 88 (271)
Q Consensus 9 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 88 (271)
|....++.+..++.+..++...+ .....+.+|.+.+.+++|+|+++. |++++.|+.|++||+++++.+..+
T Consensus 107 ~~~~~l~~~~~dg~i~iwd~~~~----~~~~~~~~h~~~v~~~~~~~~~~~-----l~s~s~d~~i~iwd~~~~~~~~~~ 177 (420)
T 3vl1_A 107 LQMRRFILGTTEGDIKVLDSNFN----LQREIDQAHVSEITKLKFFPSGEA-----LISSSQDMQLKIWSVKDGSNPRTL 177 (420)
T ss_dssp SSSCEEEEEETTSCEEEECTTSC----EEEEETTSSSSCEEEEEECTTSSE-----EEEEETTSEEEEEETTTCCCCEEE
T ss_pred cCCCEEEEEECCCCEEEEeCCCc----ceeeecccccCccEEEEECCCCCE-----EEEEeCCCeEEEEeCCCCcCceEE
Confidence 44456777778899999987655 455668899999999999999998 889999999999999999999999
Q ss_pred ecCC--cceEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcceEEEecC---Ccc---------------------ceEEE
Q 024185 89 RLRG--RPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGG---DTA---------------------EVCDI 142 (271)
Q Consensus 89 ~~~~--~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~---~~~---------------------~v~~~ 142 (271)
.+|. +.+++|+|++++|++++.|+.|++||+++++. ...+.. |.. .+.++
T Consensus 178 ~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~ 253 (420)
T 3vl1_A 178 IGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTT----IHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNL 253 (420)
T ss_dssp ECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEE----EEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTT
T ss_pred cCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCce----eEEeecCCCCCCCccEEEEecCCcceeeecccCcccce
Confidence 8775 56799999999999999999999999998764 333332 333 44445
Q ss_pred EEcCCCcEEEEEecCCeEEEEECCCCeEEEEeec-CCCCCceeeEEECCCCC-EEEEecCCCcEEEEEcCCcee-EEEec
Q 024185 143 KFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSL-EPSPNTNTEATFTPDGQ-YVVSGSGDGTLHAWNINTRNE-VACWN 219 (271)
Q Consensus 143 ~~s~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~-~~~~~ 219 (271)
+|+|++++|++++.||.|++||+++++.+..+.. +. ..+.+++|+|+++ ++++++.||.|++||+++++. +..+.
T Consensus 254 ~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~ 331 (420)
T 3vl1_A 254 EFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFT--CSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFL 331 (420)
T ss_dssp CSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTS--SCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEE
T ss_pred EEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccC--CCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhh
Confidence 5688999999999999999999999987777643 33 3499999999999 999999999999999998754 66676
Q ss_pred C-CcceeEEEEEecCCcEEEEeC--CeEEEEcCCCCC
Q 024185 220 G-NIGVVACLKWAPRRAMFVAAS--SVLSFWIPNPSS 253 (271)
Q Consensus 220 ~-~~~~v~~~~~s~~~~~l~~~~--~~v~iw~~~~~~ 253 (271)
. |...|.++. .|++++|++++ +.|++|++....
T Consensus 332 ~~~~~~v~~~~-~~~~~~l~s~~~d~~v~iw~~~~~~ 367 (420)
T 3vl1_A 332 INEGTPINNVY-FAAGALFVSSGFDTSIKLDIISDPE 367 (420)
T ss_dssp ESTTSCEEEEE-EETTEEEEEETTTEEEEEEEECCTT
T ss_pred ccCCCCceEEE-eCCCCEEEEecCCccEEEEeccCCC
Confidence 5 667788875 55788999998 889999998743
No 54
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.1e-34 Score=234.82 Aligned_cols=238 Identities=14% Similarity=0.102 Sum_probs=197.7
Q ss_pred ecceeEEeeecceeeEEEEeeccceeeEEEEEcccccceEEeeEEecC-CchhhhhhhhhhccCceEEEEEecCcc----
Q 024185 9 PITQALLFARQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSAC-LQLMIALCLVLLTTALEYGIFVLMLAS---- 83 (271)
Q Consensus 9 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~~~~~~l~s~~~dg~i~iwd~~~~~---- 83 (271)
|....++.+..++.+..++.............+.+|.+.+.++.|+|+ +.. +++++.||.|++||+++++
T Consensus 77 ~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~-----l~s~~~dg~v~iwd~~~~~~~~~ 151 (416)
T 2pm9_A 77 HNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNV-----LASGGNNGEIFIWDMNKCTESPS 151 (416)
T ss_dssp SSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTB-----EEEECSSSCEEBCBTTTTSSCTT
T ss_pred CCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCE-----EEEEcCCCeEEEEECCCCccccc
Confidence 444566777788999999887622222355668899999999999998 666 8899999999999998876
Q ss_pred --eeEEE---ecC--CcceEEEcCC-CCEEEEEecCCeEEEEeCCCCCCCcceEEEecCC------ccceEEEEEcCCC-
Q 024185 84 --FQGIL---RLR--GRPTVAFDQQ-GLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGD------TAEVCDIKFSNDG- 148 (271)
Q Consensus 84 --~~~~~---~~~--~~~~~~~~~~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~------~~~v~~~~~s~~~- 148 (271)
....+ ..| .+.+++|+|+ +.+|++++.|+.|++||+++++. ...+..+ ...+.+++|+|++
T Consensus 152 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~----~~~~~~~~~~~~~~~~v~~~~~~~~~~ 227 (416)
T 2pm9_A 152 NYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKE----VIHLSYTSPNSGIKQQLSVVEWHPKNS 227 (416)
T ss_dssp TCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEE----EEEECCCCCSSCCCCCEEEEEECSSCT
T ss_pred cccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCc----ceEEeccccccccCCceEEEEECCCCC
Confidence 33222 333 4677999999 78999999999999999998765 4445544 7889999999997
Q ss_pred cEEEEEecCC---eEEEEECCCC-eEEEEee-cCCCCCceeeEEECC-CCCEEEEecCCCcEEEEEcCCceeEEEecCCc
Q 024185 149 KSMLLTTTNN---NIYVLDAYGG-EKRCGFS-LEPSPNTNTEATFTP-DGQYVVSGSGDGTLHAWNINTRNEVACWNGNI 222 (271)
Q Consensus 149 ~~l~~~~~d~---~i~~~d~~~~-~~~~~~~-~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 222 (271)
.++++++.|+ .|++||++++ +....+. .|... +.+++|+| +++++++++.||.|++||+++++.+..+.+|.
T Consensus 228 ~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~--v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~ 305 (416)
T 2pm9_A 228 TRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKG--ILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARG 305 (416)
T ss_dssp TEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSC--EEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSS
T ss_pred CEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCc--eeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCC
Confidence 6899999998 9999999986 5566666 56654 99999999 99999999999999999999999999999999
Q ss_pred ceeEEEEEecCC-cEEEEeC--CeEEEEcCCCCCCCcC
Q 024185 223 GVVACLKWAPRR-AMFVAAS--SVLSFWIPNPSSNSTD 257 (271)
Q Consensus 223 ~~v~~~~~s~~~-~~l~~~~--~~v~iw~~~~~~~~~~ 257 (271)
..|.+++|+|++ .+|++++ +.|++||+.+.+....
T Consensus 306 ~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~ 343 (416)
T 2pm9_A 306 NWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLD 343 (416)
T ss_dssp SCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSC
T ss_pred CceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcc
Confidence 999999999999 7999998 8899999988765443
No 55
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.3e-33 Score=228.42 Aligned_cols=225 Identities=9% Similarity=0.098 Sum_probs=194.4
Q ss_pred ecceeEEeeecceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEE
Q 024185 9 PITQALLFARQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGIL 88 (271)
Q Consensus 9 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 88 (271)
|..+.++.+..++.+..++ ..+ .....+..|...+.++.|+|+++. +++++.||.|++||+++++.+..+
T Consensus 118 ~~~~~l~~~~~dg~i~i~~-~~~----~~~~~~~~~~~~v~~~~~~~~~~~-----l~~~~~d~~i~iwd~~~~~~~~~~ 187 (425)
T 1r5m_A 118 HDGNSIVTGVENGELRLWN-KTG----ALLNVLNFHRAPIVSVKWNKDGTH-----IISMDVENVTILWNVISGTVMQHF 187 (425)
T ss_dssp TTSSEEEEEETTSCEEEEE-TTS----CEEEEECCCCSCEEEEEECTTSSE-----EEEEETTCCEEEEETTTTEEEEEE
T ss_pred CCCCEEEEEeCCCeEEEEe-CCC----CeeeeccCCCccEEEEEECCCCCE-----EEEEecCCeEEEEECCCCcEEEEe
Confidence 3445667777889999998 334 344567889999999999999998 889999999999999877655433
Q ss_pred e--------------------------------------------------------cC--CcceEEEcCCCCEEEEEec
Q 024185 89 R--------------------------------------------------------LR--GRPTVAFDQQGLVFAVAME 110 (271)
Q Consensus 89 ~--------------------------------------------------------~~--~~~~~~~~~~~~~l~~~~~ 110 (271)
. .| .+.+++|+|++++|++++.
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 267 (425)
T 1r5m_A 188 ELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASD 267 (425)
T ss_dssp CCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEET
T ss_pred eccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcC
Confidence 2 22 2456899999999999999
Q ss_pred CCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEecCCeEEEEECCCCeEEEEeecCCCCCceeeEEECC
Q 024185 111 AGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTP 190 (271)
Q Consensus 111 d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~ 190 (271)
|+.|++||+++++. ...+.+|...+.+++|+|++ .+++++.|+.|++||+++++.+..+..+... +.+++|+|
T Consensus 268 d~~i~i~d~~~~~~----~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~--i~~~~~s~ 340 (425)
T 1r5m_A 268 DGTLRIWHGGNGNS----QNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVP--IFAGRISQ 340 (425)
T ss_dssp TSCEEEECSSSBSC----SEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCC--EEEEEECT
T ss_pred CCEEEEEECCCCcc----ceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCcc--EEEEEEcC
Confidence 99999999998776 55667899999999999999 9999999999999999999999988877765 99999999
Q ss_pred CCCEEEEecCCCcEEEEEcCCce--------------------eEEEecCCcc--eeEEEEEecCCcEEEEeC--CeEEE
Q 024185 191 DGQYVVSGSGDGTLHAWNINTRN--------------------EVACWNGNIG--VVACLKWAPRRAMFVAAS--SVLSF 246 (271)
Q Consensus 191 ~~~~l~~~~~dg~i~iwd~~~~~--------------------~~~~~~~~~~--~v~~~~~s~~~~~l~~~~--~~v~i 246 (271)
+++++++++.||.|++||+++++ .+..+.+|.. .|.+++|+|++++|++++ |.|++
T Consensus 341 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i 420 (425)
T 1r5m_A 341 DGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSV 420 (425)
T ss_dssp TSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEE
T ss_pred CCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEE
Confidence 99999999999999999999888 8889999976 999999999999999887 88999
Q ss_pred EcCC
Q 024185 247 WIPN 250 (271)
Q Consensus 247 w~~~ 250 (271)
|+++
T Consensus 421 w~~~ 424 (425)
T 1r5m_A 421 VAIP 424 (425)
T ss_dssp EECC
T ss_pred Eeec
Confidence 9986
No 56
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=6.4e-33 Score=227.19 Aligned_cols=232 Identities=15% Similarity=0.126 Sum_probs=190.4
Q ss_pred ecceeEEeeecceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEec-CcceeEE
Q 024185 9 PITQALLFARQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLM-LASFQGI 87 (271)
Q Consensus 9 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~ 87 (271)
|....++.+..++.+..++...+ ..+..+.+|...+.++.|++ .. +++++.||.|++||++ .+..+..
T Consensus 144 ~~~~~l~~~~~dg~i~iwd~~~~----~~~~~~~~~~~~v~~~~~~~--~~-----l~~~~~dg~i~i~d~~~~~~~~~~ 212 (401)
T 4aez_A 144 HDGSFLSVGLGNGLVDIYDVESQ----TKLRTMAGHQARVGCLSWNR--HV-----LSSGSRSGAIHHHDVRIANHQIGT 212 (401)
T ss_dssp TTSSEEEEEETTSCEEEEETTTC----CEEEEECCCSSCEEEEEEET--TE-----EEEEETTSEEEEEETTSSSCEEEE
T ss_pred CCCCEEEEECCCCeEEEEECcCC----eEEEEecCCCCceEEEEECC--CE-----EEEEcCCCCEEEEecccCcceeeE
Confidence 44456777778999999988766 44556889999999999954 45 7899999999999998 4566777
Q ss_pred EecCC--cceEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCc-EEEEEe--cCCeEEE
Q 024185 88 LRLRG--RPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGK-SMLLTT--TNNNIYV 162 (271)
Q Consensus 88 ~~~~~--~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~--~d~~i~~ 162 (271)
+..|. +.+++|+|++++|++++.|+.|++||+++++. ...+.+|...|.+++|+|++. ++++++ .|+.|++
T Consensus 213 ~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~----~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i 288 (401)
T 4aez_A 213 LQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIP----KFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHF 288 (401)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSE----EEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEE
T ss_pred EcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCc----cEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEE
Confidence 77774 56699999999999999999999999998765 667778999999999999765 455554 6999999
Q ss_pred EECCCCeEEEEeecCCCCCceeeEEECCCCCEEEE--ecCCCcEEEEEcCCceeEE--EecCCcceeEEEEEecCCcEEE
Q 024185 163 LDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVS--GSGDGTLHAWNINTRNEVA--CWNGNIGVVACLKWAPRRAMFV 238 (271)
Q Consensus 163 ~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~--~~~dg~i~iwd~~~~~~~~--~~~~~~~~v~~~~~s~~~~~l~ 238 (271)
||+++++.+..+..+ . .+.+++|+|+++++++ |+.||.|++||+.+++... .+.+|...|.+++|+|++++|+
T Consensus 289 ~d~~~~~~~~~~~~~-~--~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~ 365 (401)
T 4aez_A 289 WNAATGARVNTVDAG-S--QVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILS 365 (401)
T ss_dssp EETTTCCEEEEEECS-S--CEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEE
T ss_pred EECCCCCEEEEEeCC-C--cEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEE
Confidence 999999998888643 3 3999999999999998 5589999999999865544 4678999999999999999999
Q ss_pred EeC--CeEEEEcCCCCCCCcCC
Q 024185 239 AAS--SVLSFWIPNPSSNSTDE 258 (271)
Q Consensus 239 ~~~--~~v~iw~~~~~~~~~~~ 258 (271)
+++ |.|++|++.+++.....
T Consensus 366 s~~~dg~i~iw~~~~~~~~~~~ 387 (401)
T 4aez_A 366 TAASDENLKFWRVYDGDHVKRP 387 (401)
T ss_dssp EECTTSEEEEEECCC-------
T ss_pred EEeCCCcEEEEECCCCcccccc
Confidence 998 88999999988766543
No 57
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.7e-34 Score=232.90 Aligned_cols=227 Identities=13% Similarity=0.126 Sum_probs=188.1
Q ss_pred eeEEeeecceeeEEEEeeccceeeEEEEEcccccceEEeeEEec-CCchhhhhhhhhhccCceEEEEEecCcceeEEE--
Q 024185 12 QALLFARQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSA-CLQLMIALCLVLLTTALEYGIFVLMLASFQGIL-- 88 (271)
Q Consensus 12 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-- 88 (271)
..++.+..++.+..++...+ ..+..+.+|...+.++.|+| ++.. +++++.||.|++||+++++.+..+
T Consensus 86 ~~l~~~~~dg~i~v~d~~~~----~~~~~~~~~~~~i~~~~~~~~~~~~-----l~s~~~dg~i~iwd~~~~~~~~~~~~ 156 (366)
T 3k26_A 86 PLLAVAGSRGIIRIINPITM----QCIKHYVGHGNAINELKFHPRDPNL-----LLSVSKDHALRLWNIQTDTLVAIFGG 156 (366)
T ss_dssp EEEEEEETTCEEEEECTTTC----CEEEEEESCCSCEEEEEECSSCTTE-----EEEEETTSCEEEEETTTTEEEEEECS
T ss_pred CEEEEecCCCEEEEEEchhc----eEeeeecCCCCcEEEEEECCCCCCE-----EEEEeCCCeEEEEEeecCeEEEEecc
Confidence 35666778899999987766 44556788999999999999 7887 889999999999999999988887
Q ss_pred -ecC--CcceEEEcCCCCEEEEEecCCeEEEEeCCCCCCCc------------------------ceEEEecCCccceEE
Q 024185 89 -RLR--GRPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGP------------------------FDTFLVGGDTAEVCD 141 (271)
Q Consensus 89 -~~~--~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~------------------------~~~~~~~~~~~~v~~ 141 (271)
..| .+.+++|+|++++|++++.||.|++||+++++... .......+|...|.+
T Consensus 157 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 236 (366)
T 3k26_A 157 VEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDC 236 (366)
T ss_dssp TTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCE
T ss_pred cccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEE
Confidence 445 46679999999999999999999999998754200 011223448899999
Q ss_pred EEEcCCCcEEEEEecCCeEEEEECCCCeE--------------EEEeecCCCCCceeeEEECCC--CCEEEEecCCCcEE
Q 024185 142 IKFSNDGKSMLLTTTNNNIYVLDAYGGEK--------------RCGFSLEPSPNTNTEATFTPD--GQYVVSGSGDGTLH 205 (271)
Q Consensus 142 ~~~s~~~~~l~~~~~d~~i~~~d~~~~~~--------------~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~ 205 (271)
++|+ ++++++++.|+.|++||+++++. +..+..+... +.+++|+|+ +++|++++.||.|+
T Consensus 237 ~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--v~~~~~s~~~~~~~l~~~~~dg~i~ 312 (366)
T 3k26_A 237 VRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCD--IWYMRFSMDFWQKMLALGNQVGKLY 312 (366)
T ss_dssp EEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCC--SSCCCCEECTTSSEEEEECTTSCEE
T ss_pred EEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCc--EEEEEEcCCCCCcEEEEEecCCcEE
Confidence 9999 67999999999999999987643 6667766655 888999999 99999999999999
Q ss_pred EEEcCCce----eEEEecCC--cceeEEEEEecCCcEEEEeC--CeEEEEcCCC
Q 024185 206 AWNINTRN----EVACWNGN--IGVVACLKWAPRRAMFVAAS--SVLSFWIPNP 251 (271)
Q Consensus 206 iwd~~~~~----~~~~~~~~--~~~v~~~~~s~~~~~l~~~~--~~v~iw~~~~ 251 (271)
+||+.+++ ....+.+| ...|.+++|+|++++|++++ |.|++||+.+
T Consensus 313 vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 313 VWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp EEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred EEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEecC
Confidence 99999875 34477777 78999999999999999997 8899999853
No 58
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=2.2e-33 Score=248.80 Aligned_cols=238 Identities=12% Similarity=0.121 Sum_probs=208.4
Q ss_pred eecceeEEeeecceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEE
Q 024185 8 LPITQALLFARQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGI 87 (271)
Q Consensus 8 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 87 (271)
.|....++.+..++.+..|+...+ .....+..|.+.+.++.|+|+++. +++++.||.|++||+++++.+..
T Consensus 22 sp~~~~la~~~~~g~v~iwd~~~~----~~~~~~~~~~~~v~~~~~s~~~~~-----l~~~~~dg~i~vw~~~~~~~~~~ 92 (814)
T 3mkq_A 22 HPTEPWVLTTLYSGRVEIWNYETQ----VEVRSIQVTETPVRAGKFIARKNW-----IIVGSDDFRIRVFNYNTGEKVVD 92 (814)
T ss_dssp CSSSSEEEEEETTSEEEEEETTTT----EEEEEEECCSSCEEEEEEEGGGTE-----EEEEETTSEEEEEETTTCCEEEE
T ss_pred CCCCCEEEEEeCCCEEEEEECCCC----ceEEEEecCCCcEEEEEEeCCCCE-----EEEEeCCCeEEEEECCCCcEEEE
Confidence 355567777788999999998776 455668899999999999999998 88999999999999999999999
Q ss_pred EecCC--cceEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcC-CCcEEEEEecCCeEEEEE
Q 024185 88 LRLRG--RPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSN-DGKSMLLTTTNNNIYVLD 164 (271)
Q Consensus 88 ~~~~~--~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~d~~i~~~d 164 (271)
+..|. +.+++|+|++++|++++.||.|++||+.++.. ....+.+|...|.+++|+| +++.+++++.||.|++||
T Consensus 93 ~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~---~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd 169 (814)
T 3mkq_A 93 FEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWA---LEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWS 169 (814)
T ss_dssp EECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSE---EEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEE
T ss_pred EecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCce---EEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEE
Confidence 98775 56799999999999999999999999987632 2556778999999999999 899999999999999999
Q ss_pred CCCCeEEEEeecCCCCCceeeEEECC--CCCEEEEecCCCcEEEEEcCCceeEEEecCCcceeEEEEEecCCcEEEEeC-
Q 024185 165 AYGGEKRCGFSLEPSPNTNTEATFTP--DGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS- 241 (271)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~- 241 (271)
+++++....+..+.. ..+.+++|+| +++++++++.||.|++||+.+++.+..+.+|...|.+++|+|+++++++++
T Consensus 170 ~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 248 (814)
T 3mkq_A 170 LGQSTPNFTLTTGQE-RGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSE 248 (814)
T ss_dssp TTCSSCSEEEECCCT-TCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEET
T ss_pred CCCCcceeEEecCCC-CCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeC
Confidence 998887777665542 3488899999 999999999999999999999999999999999999999999999999997
Q ss_pred -CeEEEEcCCCCCCCcCC
Q 024185 242 -SVLSFWIPNPSSNSTDE 258 (271)
Q Consensus 242 -~~v~iw~~~~~~~~~~~ 258 (271)
|.|++||+.+++.....
T Consensus 249 dg~v~vwd~~~~~~~~~~ 266 (814)
T 3mkq_A 249 DGTLKIWNSSTYKVEKTL 266 (814)
T ss_dssp TSCEEEEETTTCSEEEEE
T ss_pred CCeEEEEECCCCcEEEEe
Confidence 88999999987755443
No 59
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.7e-32 Score=218.80 Aligned_cols=225 Identities=13% Similarity=0.106 Sum_probs=191.9
Q ss_pred ecceeEEeeecceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEE
Q 024185 9 PITQALLFARQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGIL 88 (271)
Q Consensus 9 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 88 (271)
|..+.++.+..++.+..++...+. ......+..|...+.++.++|+++. +++++.||.|++||+++++.+..+
T Consensus 107 ~~~~~l~~~~~d~~i~~~d~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~-----l~~~~~dg~v~~~d~~~~~~~~~~ 179 (337)
T 1gxr_A 107 PDGCTLIVGGEASTLSIWDLAAPT--PRIKAELTSSAPACYALAISPDSKV-----CFSCCSDGNIAVWDLHNQTLVRQF 179 (337)
T ss_dssp TTSSEEEEEESSSEEEEEECCCC----EEEEEEECSSSCEEEEEECTTSSE-----EEEEETTSCEEEEETTTTEEEEEE
T ss_pred CCCCEEEEEcCCCcEEEEECCCCC--cceeeecccCCCceEEEEECCCCCE-----EEEEeCCCcEEEEeCCCCceeeee
Confidence 444567777778999999887663 2244557788999999999999998 889999999999999999998888
Q ss_pred ecCC--cceEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEecCCeEEEEECC
Q 024185 89 RLRG--RPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAY 166 (271)
Q Consensus 89 ~~~~--~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~ 166 (271)
..|. +.+++|+|++++|++++.||.|++||+++++. ...+ .+...+.+++|+|+++++++++.++.|++||++
T Consensus 180 ~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~----~~~~-~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~ 254 (337)
T 1gxr_A 180 QGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQ----LQQH-DFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVN 254 (337)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE----EEEE-ECSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred ecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCce----Eeee-cCCCceEEEEECCCCCEEEEEcCCCcEEEEECC
Confidence 7764 56699999999999999999999999998764 3333 367889999999999999999999999999999
Q ss_pred CCeEEEEeecCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCCceeEEEecCCcceeEEEEEecCCcEEEEeC--CeE
Q 024185 167 GGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVL 244 (271)
Q Consensus 167 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~~v 244 (271)
+++.. .+..+... +.+++|+|+++++++++.||.|++||+.+++.+... .|...|.+++|+|++++|++++ |.|
T Consensus 255 ~~~~~-~~~~~~~~--v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~i 330 (337)
T 1gxr_A 255 KPDKY-QLHLHESC--VLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQS-KESSSVLSCDISVDDKYIVTGSGDKKA 330 (337)
T ss_dssp SSCEE-EECCCSSC--EEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE-ECSSCEEEEEECTTSCEEEEEETTSCE
T ss_pred CCCeE-EEcCCccc--eeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEEe-cCCCcEEEEEECCCCCEEEEecCCCeE
Confidence 88754 44555544 999999999999999999999999999999888655 4788899999999999999987 889
Q ss_pred EEEcC
Q 024185 245 SFWIP 249 (271)
Q Consensus 245 ~iw~~ 249 (271)
++|++
T Consensus 331 ~iw~~ 335 (337)
T 1gxr_A 331 TVYEV 335 (337)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99996
No 60
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.2e-33 Score=231.44 Aligned_cols=227 Identities=10% Similarity=0.076 Sum_probs=187.8
Q ss_pred ecceeeEEEEeeccceeeEEEEEcccccceEEeeEEec-CCchhhhhhhhhhccCceEEEEEecCc-------ceeEEEe
Q 024185 18 RQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSA-CLQLMIALCLVLLTTALEYGIFVLMLA-------SFQGILR 89 (271)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~~~~~~l~s~~~dg~i~iwd~~~~-------~~~~~~~ 89 (271)
..++.+.+++.............+.+|.+.|.+++|+| ++.. |++++.||.|++||+.++ +.+..+.
T Consensus 54 ~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~-----l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~ 128 (402)
T 2aq5_A 54 SGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNV-----IASGSEDCTVMVWEIPDGGLVLPLREPVITLE 128 (402)
T ss_dssp SSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTE-----EEEEETTSEEEEEECCTTCCSSCBCSCSEEEE
T ss_pred cCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCE-----EEEEeCCCeEEEEEccCCCCccccCCceEEec
Confidence 55788888886443221122334778999999999999 7887 889999999999999987 5677787
Q ss_pred cCC--cceEEEcCCC-CEEEEEecCCeEEEEeCCCCCCCcceEEEe--cCCccceEEEEEcCCCcEEEEEecCCeEEEEE
Q 024185 90 LRG--RPTVAFDQQG-LVFAVAMEAGAIKLFDSRSYDKGPFDTFLV--GGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLD 164 (271)
Q Consensus 90 ~~~--~~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~--~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d 164 (271)
+|. +.+++|+|++ ++|++++.|+.|++||+++++. ...+ .+|...|.+++|+|++++|++++.|+.|++||
T Consensus 129 ~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd 204 (402)
T 2aq5_A 129 GHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAA----VLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIE 204 (402)
T ss_dssp CCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEE----EEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEE
T ss_pred CCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCc----cEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEe
Confidence 774 6679999998 6999999999999999998775 5566 78999999999999999999999999999999
Q ss_pred CCCCeEEEEe-ecCCCCCceeeEEECCCCCEEEEe---cCCCcEEEEEcCCcee-EEEe-cCCcceeEEEEEecCCcEEE
Q 024185 165 AYGGEKRCGF-SLEPSPNTNTEATFTPDGQYVVSG---SGDGTLHAWNINTRNE-VACW-NGNIGVVACLKWAPRRAMFV 238 (271)
Q Consensus 165 ~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~---~~dg~i~iwd~~~~~~-~~~~-~~~~~~v~~~~~s~~~~~l~ 238 (271)
+++++.+..+ ..+.. ..+.++.|+|+++++++| +.|+.|++||+++++. +... ..|...+.+++|+|++++|+
T Consensus 205 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 283 (402)
T 2aq5_A 205 PRKGTVVAEKDRPHEG-TRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVY 283 (402)
T ss_dssp TTTTEEEEEEECSSCS-SSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEE
T ss_pred CCCCceeeeeccCCCC-CcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEE
Confidence 9999998888 55544 247889999999999999 7899999999988664 3332 24677899999999999886
Q ss_pred -EeC--CeEEEEcCCCCCC
Q 024185 239 -AAS--SVLSFWIPNPSSN 254 (271)
Q Consensus 239 -~~~--~~v~iw~~~~~~~ 254 (271)
+++ +.|++||+.+++.
T Consensus 284 ~~g~~dg~i~i~d~~~~~~ 302 (402)
T 2aq5_A 284 LCGKGDSSIRYFEITSEAP 302 (402)
T ss_dssp EEETTCSCEEEEEECSSTT
T ss_pred EEEcCCCeEEEEEecCCCc
Confidence 453 7899999998773
No 61
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=7.9e-33 Score=241.49 Aligned_cols=226 Identities=13% Similarity=0.149 Sum_probs=187.0
Q ss_pred ecceeEEeeecceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEE
Q 024185 9 PITQALLFARQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGIL 88 (271)
Q Consensus 9 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 88 (271)
|..+.++.+..++.+.+++...+ ...+.+.+|.+.|.+++|+|+++. +++++.|++|++||..........
T Consensus 440 ~~g~~l~sgs~Dg~v~vwd~~~~----~~~~~~~~h~~~v~~~~~s~~~~~-----l~s~s~D~~i~iwd~~~~~~~~~~ 510 (694)
T 3dm0_A 440 SDGQFALSGSWDGELRLWDLAAG----VSTRRFVGHTKDVLSVAFSLDNRQ-----IVSASRDRTIKLWNTLGECKYTIS 510 (694)
T ss_dssp TTSSEEEEEETTSEEEEEETTTT----EEEEEEECCSSCEEEEEECTTSSC-----EEEEETTSCEEEECTTSCEEEEEC
T ss_pred CCCCEEEEEeCCCcEEEEECCCC----cceeEEeCCCCCEEEEEEeCCCCE-----EEEEeCCCEEEEEECCCCcceeec
Confidence 34455666677999999998777 445668899999999999999998 899999999999998654433322
Q ss_pred ---ecC--CcceEEEcCCC--CEEEEEecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEecCCeEE
Q 024185 89 ---RLR--GRPTVAFDQQG--LVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIY 161 (271)
Q Consensus 89 ---~~~--~~~~~~~~~~~--~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~ 161 (271)
.+| .+.+++|+|++ ..+++++.|+.|++||+++.+. ...+.+|.+.|.+++|+|++++|++++.|+.|+
T Consensus 511 ~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~----~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~ 586 (694)
T 3dm0_A 511 EGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKL----RSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVL 586 (694)
T ss_dssp SSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCE----EEEECCCSSCEEEEEECTTSSEEEEEETTSBCE
T ss_pred cCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcE----EEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEE
Confidence 233 36779999987 5899999999999999998775 667889999999999999999999999999999
Q ss_pred EEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCCceeEEEecCCc-------------------
Q 024185 162 VLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNI------------------- 222 (271)
Q Consensus 162 ~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~------------------- 222 (271)
+||+++++.+..+..+. .+.+++|+|++.++++++ ++.|++||+++++.+..+..+.
T Consensus 587 iwd~~~~~~~~~~~~~~---~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 662 (694)
T 3dm0_A 587 LWDLAEGKKLYSLEANS---VIHALCFSPNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKV 662 (694)
T ss_dssp EEETTTTEEEECCBCSS---CEEEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC----------------CC
T ss_pred EEECCCCceEEEecCCC---cEEEEEEcCCCcEEEEEc-CCCEEEEECCCCCChhhhccccccccccccccccccCCcee
Confidence 99999999887776433 399999999999887776 4569999999999887764321
Q ss_pred ceeEEEEEecCCcEEEEeC--CeEEEEcCCC
Q 024185 223 GVVACLKWAPRRAMFVAAS--SVLSFWIPNP 251 (271)
Q Consensus 223 ~~v~~~~~s~~~~~l~~~~--~~v~iw~~~~ 251 (271)
..+++++|+|+|++|++|+ |.|++|++..
T Consensus 663 ~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~~ 693 (694)
T 3dm0_A 663 IYCTSLNWSADGSTLFSGYTDGVIRVWGIGR 693 (694)
T ss_dssp CCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred EEeeeEEEcCCCCEEEEEcCCCeEEEEeccC
Confidence 1378999999999999998 8999999853
No 62
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=2.9e-33 Score=231.92 Aligned_cols=239 Identities=10% Similarity=0.159 Sum_probs=189.3
Q ss_pred ecceeEEeeecceeeEEEEeeccce-------eeEEEEEccccc------------ceEEeeEEecCC--chhhhhhhhh
Q 024185 9 PITQALLFARQNIILILLESLCGIY-------QCMIIEFFATSK------------GIRRGLFLSACL--QLMIALCLVL 67 (271)
Q Consensus 9 ~~~~~l~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~------------~~v~~~~~s~~~--~~~~~~~l~s 67 (271)
|..+.|+.+..++.+.+++...+.. .......+.+|. +.|.++.|+|++ .. +++
T Consensus 38 ~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~-----l~s 112 (447)
T 3dw8_B 38 HSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQ-----FLL 112 (447)
T ss_dssp SSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSE-----EEE
T ss_pred CCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcce-----EEE
Confidence 5556677778899999999876531 122456678888 889999999998 56 789
Q ss_pred hccCceEEEEEecCccee---------------------------------------EEE-ecC--CcceEEEcCCCCEE
Q 024185 68 LTTALEYGIFVLMLASFQ---------------------------------------GIL-RLR--GRPTVAFDQQGLVF 105 (271)
Q Consensus 68 ~~~dg~i~iwd~~~~~~~---------------------------------------~~~-~~~--~~~~~~~~~~~~~l 105 (271)
++.|+.|++||+.+++.. ..+ .+| .+.+++|+|++++|
T Consensus 113 ~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 192 (447)
T 3dw8_B 113 STNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETY 192 (447)
T ss_dssp EECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEE
T ss_pred eCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCCCCEE
Confidence 999999999999765432 122 344 36779999999999
Q ss_pred EEEecCCeEEEEeCCCCCCCcceEE-----EecCCccceEEEEEcCCC-cEEEEEecCCeEEEEECCCCeE----EEEee
Q 024185 106 AVAMEAGAIKLFDSRSYDKGPFDTF-----LVGGDTAEVCDIKFSNDG-KSMLLTTTNNNIYVLDAYGGEK----RCGFS 175 (271)
Q Consensus 106 ~~~~~d~~i~i~d~~~~~~~~~~~~-----~~~~~~~~v~~~~~s~~~-~~l~~~~~d~~i~~~d~~~~~~----~~~~~ 175 (271)
++| .|+.|++||+++... ..... .+.+|...|.+++|+|++ ++|++++.||.|++||+++++. ...+.
T Consensus 193 ~s~-~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 270 (447)
T 3dw8_B 193 LSA-DDLRINLWHLEITDR-SFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFE 270 (447)
T ss_dssp EEE-CSSEEEEEETTEEEE-EEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEEC
T ss_pred EEe-CCCeEEEEECCCCCc-eeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEec
Confidence 998 799999999984332 01111 256789999999999998 9999999999999999999886 67777
Q ss_pred cCCCC----------CceeeEEECCCCCEEEEecCCCcEEEEEcCC-ceeEEEecCCcce---------------eEEEE
Q 024185 176 LEPSP----------NTNTEATFTPDGQYVVSGSGDGTLHAWNINT-RNEVACWNGNIGV---------------VACLK 229 (271)
Q Consensus 176 ~~~~~----------~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~---------------v~~~~ 229 (271)
.+..+ ..+.+++|+|++++|++++. +.|++||+++ ++++..+.+|... +..++
T Consensus 271 ~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~ 349 (447)
T 3dw8_B 271 EPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECC 349 (447)
T ss_dssp CC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEE
T ss_pred cCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeeccccccccccccccccccccceEEE
Confidence 66541 14999999999999999999 9999999997 8888888888642 23499
Q ss_pred EecCCcEEEEeC--CeEEEEcCCCCCCC
Q 024185 230 WAPRRAMFVAAS--SVLSFWIPNPSSNS 255 (271)
Q Consensus 230 ~s~~~~~l~~~~--~~v~iw~~~~~~~~ 255 (271)
|+|++++|++++ +.|++||+.+++..
T Consensus 350 ~s~~~~~l~s~s~dg~v~iwd~~~~~~~ 377 (447)
T 3dw8_B 350 WNGSDSVVMTGSYNNFFRMFDRNTKRDI 377 (447)
T ss_dssp ECTTSSEEEEECSTTEEEEEETTTCCEE
T ss_pred ECCCCCEEEEeccCCEEEEEEcCCCcce
Confidence 999999999998 88999999988754
No 63
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=3e-33 Score=225.62 Aligned_cols=231 Identities=9% Similarity=0.083 Sum_probs=191.5
Q ss_pred ceeEEeeecceeeEEEEeeccceeeEEEEEc--ccccceEEeeEEecC----CchhhhhhhhhhccCceEEEEEecCcce
Q 024185 11 TQALLFARQNIILILLESLCGIYQCMIIEFF--ATSKGIRRGLFLSAC----LQLMIALCLVLLTTALEYGIFVLMLASF 84 (271)
Q Consensus 11 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~s~~----~~~~~~~~l~s~~~dg~i~iwd~~~~~~ 84 (271)
...++.+..++.+..++...+..... +..+ ..|...+.+++|+|+ +.+ +++++.||.|++||+++++.
T Consensus 34 ~~~~~~~~~~~~v~vw~~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~-----l~~~~~dg~i~v~d~~~~~~ 107 (366)
T 3k26_A 34 DPLVFATVGSNRVTLYECHSQGEIRL-LQSYVDADADENFYTCAWTYDSNTSHPL-----LAVAGSRGIIRIINPITMQC 107 (366)
T ss_dssp SCEEEEEEETTEEEEEEECGGGCEEE-EEEEECSCTTCCEEEEEEEECTTTCCEE-----EEEEETTCEEEEECTTTCCE
T ss_pred CceEEEECCCCEEEEEEcCCCcEEEe-eeeccccCCCCcEEEEEeccCCCCCCCE-----EEEecCCCEEEEEEchhceE
Confidence 34466667788889998876533222 2222 236688999999999 556 88999999999999999999
Q ss_pred eEEEecCC--cceEEEcC-CCCEEEEEecCCeEEEEeCCCCCCCcceEEEe---cCCccceEEEEEcCCCcEEEEEecCC
Q 024185 85 QGILRLRG--RPTVAFDQ-QGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLV---GGDTAEVCDIKFSNDGKSMLLTTTNN 158 (271)
Q Consensus 85 ~~~~~~~~--~~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~---~~~~~~v~~~~~s~~~~~l~~~~~d~ 158 (271)
+..+..|. +.+++|+| ++++|++++.||.|++||+++++. ...+ .+|...|.+++|+|++++|++++.|+
T Consensus 108 ~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 183 (366)
T 3k26_A 108 IKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTL----VAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDH 183 (366)
T ss_dssp EEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEE----EEEECSTTSCSSCEEEEEECTTSSEEEEEETTS
T ss_pred eeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeE----EEEecccccccCceeEEEECCCCCEEEEecCCC
Confidence 99998775 66799999 899999999999999999998764 4444 68999999999999999999999999
Q ss_pred eEEEEECCCCeEEEEeec----------------------------CCCCCceeeEEECCCCCEEEEecCCCcEEEEEcC
Q 024185 159 NIYVLDAYGGEKRCGFSL----------------------------EPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNIN 210 (271)
Q Consensus 159 ~i~~~d~~~~~~~~~~~~----------------------------~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~ 210 (271)
.|++||+++++....+.. +.. .|.+++|+ ++++++++.||.|++||++
T Consensus 184 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~--~~~l~~~~~d~~i~~wd~~ 259 (366)
T 3k26_A 184 SLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRN--YVDCVRWL--GDLILSKSCENAIVCWKPG 259 (366)
T ss_dssp CEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSS--CCCEEEEE--TTEEEEECSSSEEEEEEES
T ss_pred CEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcc--eEEEEEEc--CCEEEEEecCCEEEEEeCC
Confidence 999999998765443332 444 48899998 7799999999999999998
Q ss_pred Ccee--------------EEEecCCcceeEEEEEecC--CcEEEEeC--CeEEEEcCCCCCCC
Q 024185 211 TRNE--------------VACWNGNIGVVACLKWAPR--RAMFVAAS--SVLSFWIPNPSSNS 255 (271)
Q Consensus 211 ~~~~--------------~~~~~~~~~~v~~~~~s~~--~~~l~~~~--~~v~iw~~~~~~~~ 255 (271)
+++. +..+..|...|.+++|+|+ +++|++++ |.|++||+.+++..
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~ 322 (366)
T 3k26_A 260 KMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPH 322 (366)
T ss_dssp STTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGG
T ss_pred CccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCc
Confidence 7644 7788899999999999999 99999998 88999999987643
No 64
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.3e-32 Score=223.83 Aligned_cols=229 Identities=15% Similarity=0.102 Sum_probs=182.1
Q ss_pred eeEEeeecceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEecC
Q 024185 12 QALLFARQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILRLR 91 (271)
Q Consensus 12 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 91 (271)
..++.+..++.+..++.... ..........+...+.+++|+|+++. +++++.|+.|++||+ +++.+..+..|
T Consensus 132 ~~l~s~~~d~~i~iwd~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~-----l~~~~~d~~i~i~d~-~~~~~~~~~~h 203 (383)
T 3ei3_B 132 NQLFVSSIRGATTLRDFSGS--VIQVFAKTDSWDYWYCCVDVSVSRQM-----LATGDSTGRLLLLGL-DGHEIFKEKLH 203 (383)
T ss_dssp EEEEEEETTTEEEEEETTSC--EEEEEECCCCSSCCEEEEEEETTTTE-----EEEEETTSEEEEEET-TSCEEEEEECS
T ss_pred CEEEEEeCCCEEEEEECCCC--ceEEEeccCCCCCCeEEEEECCCCCE-----EEEECCCCCEEEEEC-CCCEEEEeccC
Confidence 45556677899999887643 22222333445588999999999998 889999999999999 57778888777
Q ss_pred C--cceEEEcCCCC-EEEEEecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcC-CCcEEEEEecCCeEEEEECCC
Q 024185 92 G--RPTVAFDQQGL-VFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSN-DGKSMLLTTTNNNIYVLDAYG 167 (271)
Q Consensus 92 ~--~~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~d~~i~~~d~~~ 167 (271)
. +.+++|+|+++ ++++++.|+.|++||+++.+........+ +|...|.+++|+| ++++|++++.|+.|++||+++
T Consensus 204 ~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~ 282 (383)
T 3ei3_B 204 KAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYD 282 (383)
T ss_dssp SSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTB
T ss_pred CCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCC
Confidence 4 66799999998 99999999999999998744211223333 6899999999999 999999999999999999998
Q ss_pred CeEEEEeecCCCC---------------CceeeEEECCCCCEEEEecCCCcEEEEEcCCceeEEEecC--CcceeEEEEE
Q 024185 168 GEKRCGFSLEPSP---------------NTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNG--NIGVVACLKW 230 (271)
Q Consensus 168 ~~~~~~~~~~~~~---------------~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~--~~~~v~~~~~ 230 (271)
++....+..+... ..+..++|+|++++ +++.||.|++||+.+++.+..+.+ |...+..++|
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~ 360 (383)
T 3ei3_B 283 WSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKF 360 (383)
T ss_dssp TTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEE
T ss_pred CccccccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEE
Confidence 8777666644321 12334666667666 778899999999999999999976 4577888899
Q ss_pred ecCCcEEEEeC-CeEEEEcCCC
Q 024185 231 APRRAMFVAAS-SVLSFWIPNP 251 (271)
Q Consensus 231 s~~~~~l~~~~-~~v~iw~~~~ 251 (271)
+|++++|++++ +.|++||+++
T Consensus 361 s~~g~~l~s~sd~~i~iw~~~~ 382 (383)
T 3ei3_B 361 SPTGDVLASGMGFNILIWNRED 382 (383)
T ss_dssp CTTSSEEEEEETTEEEEEECC-
T ss_pred ecCccEEEEecCCcEEEEecCC
Confidence 99999999998 8999999875
No 65
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=4.3e-32 Score=216.97 Aligned_cols=233 Identities=15% Similarity=0.179 Sum_probs=186.6
Q ss_pred ecceeEEe-eecceeeEEEEeecccee-eEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeE
Q 024185 9 PITQALLF-ARQNIILILLESLCGIYQ-CMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQG 86 (271)
Q Consensus 9 ~~~~~l~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~ 86 (271)
|....+++ +..|+.+.+|+....... ....+.+.+|...|.++.|+|++++ +++++.|+.|++|+........
T Consensus 48 p~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~-----l~s~~~d~~i~~~~~~~~~~~~ 122 (340)
T 4aow_A 48 PQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQF-----ALSGSWDGTLRLWDLTTGTTTR 122 (340)
T ss_dssp TTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSE-----EEEEETTSEEEEEETTTTEEEE
T ss_pred CCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCE-----EEEEcccccceEEeecccceee
Confidence 44344554 566899999987654322 2345678999999999999999998 8999999999999999888777
Q ss_pred EEecCC--cceEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCC--cEEEEEecCCeEEE
Q 024185 87 ILRLRG--RPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDG--KSMLLTTTNNNIYV 162 (271)
Q Consensus 87 ~~~~~~--~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~--~~l~~~~~d~~i~~ 162 (271)
....+. .....+++++++|++++.|+.+++||...... ......+|...+.+++|++++ .++++++.|+.|++
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i 199 (340)
T 4aow_A 123 RFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCK---YTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKV 199 (340)
T ss_dssp EEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEE---EEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEE
T ss_pred eecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCce---EEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEE
Confidence 766553 45588999999999999999999999876542 344567889999999999864 56789999999999
Q ss_pred EECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCCceeEEEecCCcceeEEEEEecCCcEEEEeC-
Q 024185 163 LDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS- 241 (271)
Q Consensus 163 ~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~- 241 (271)
||+++++.+..+..|... |.+++|+|++++|++|+.||.|++||+++.+.+..+..+ ..|.++.|+|++.+++++.
T Consensus 200 ~d~~~~~~~~~~~~h~~~--v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~d 276 (340)
T 4aow_A 200 WNLANCKLKTNHIGHTGY--LNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG-DIINALCFSPNRYWLCAATG 276 (340)
T ss_dssp EETTTTEEEEEECCCSSC--EEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECS-SCEEEEEECSSSSEEEEEET
T ss_pred EECCCCceeeEecCCCCc--EEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCC-ceEEeeecCCCCceeeccCC
Confidence 999999999999888766 999999999999999999999999999988877766543 3466666666665555544
Q ss_pred CeEEEEcCCCC
Q 024185 242 SVLSFWIPNPS 252 (271)
Q Consensus 242 ~~v~iw~~~~~ 252 (271)
+.|++||++++
T Consensus 277 ~~i~iwd~~~~ 287 (340)
T 4aow_A 277 PSIKIWDLEGK 287 (340)
T ss_dssp TEEEEEETTTT
T ss_pred CEEEEEECCCC
Confidence 66666666543
No 66
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.2e-33 Score=227.52 Aligned_cols=206 Identities=14% Similarity=0.225 Sum_probs=177.9
Q ss_pred EEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEec--CcceeEEEecCC--cceEEEcCC--CCEEEEEecCC
Q 024185 39 EFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLM--LASFQGILRLRG--RPTVAFDQQ--GLVFAVAMEAG 112 (271)
Q Consensus 39 ~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~--~~~~~~~~~~~~--~~~~~~~~~--~~~l~~~~~d~ 112 (271)
..+.+|.+.|.+++|+|++++ |++++.||.|++||++ +++.+..+..|. +.+++|+++ +++|++++.||
T Consensus 5 ~~~~~h~~~v~~~~~s~~~~~-----l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg 79 (379)
T 3jrp_A 5 VIANAHNELIHDAVLDYYGKR-----LATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDG 79 (379)
T ss_dssp CCEEECCCCEEEEEECSSSSE-----EEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTS
T ss_pred EEecCCcccEEEEEEcCCCCE-----EEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCC
Confidence 447889999999999999998 8899999999999998 556777787774 567999987 89999999999
Q ss_pred eEEEEeCCCCCCCcceEEEecCCccceEEEEEcCC--CcEEEEEecCCeEEEEECCCCeE--EEEeecCCCCCceeeEEE
Q 024185 113 AIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSND--GKSMLLTTTNNNIYVLDAYGGEK--RCGFSLEPSPNTNTEATF 188 (271)
Q Consensus 113 ~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~d~~i~~~d~~~~~~--~~~~~~~~~~~~v~~~~~ 188 (271)
.|++||+.+++. .....+..|...|.+++|+|+ ++++++++.|+.|++||+++++. ...+..+.. .+.+++|
T Consensus 80 ~v~iwd~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~--~v~~~~~ 155 (379)
T 3jrp_A 80 KVLIWKEENGRW--SQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAI--GVNSASW 155 (379)
T ss_dssp CEEEEEEETTEE--EEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTT--CEEEEEE
T ss_pred EEEEEEcCCCce--eEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCC--ceEEEEE
Confidence 999999998752 235667789999999999999 99999999999999999988743 334445554 4999999
Q ss_pred CC-------------CCCEEEEecCCCcEEEEEcCCce----eEEEecCCcceeEEEEEecC---CcEEEEeC--CeEEE
Q 024185 189 TP-------------DGQYVVSGSGDGTLHAWNINTRN----EVACWNGNIGVVACLKWAPR---RAMFVAAS--SVLSF 246 (271)
Q Consensus 189 ~~-------------~~~~l~~~~~dg~i~iwd~~~~~----~~~~~~~~~~~v~~~~~s~~---~~~l~~~~--~~v~i 246 (271)
+| +++++++++.||.|++||+++++ ....+.+|...|.+++|+|+ +++|++++ +.|++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~i 235 (379)
T 3jrp_A 156 APATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCII 235 (379)
T ss_dssp CCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEE
T ss_pred cCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEE
Confidence 99 69999999999999999998754 45677889999999999999 89999997 88999
Q ss_pred EcCCCCC
Q 024185 247 WIPNPSS 253 (271)
Q Consensus 247 w~~~~~~ 253 (271)
||+.++.
T Consensus 236 wd~~~~~ 242 (379)
T 3jrp_A 236 WTQDNEQ 242 (379)
T ss_dssp EEESSTT
T ss_pred EeCCCCC
Confidence 9998864
No 67
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=7.6e-33 Score=225.25 Aligned_cols=211 Identities=12% Similarity=0.091 Sum_probs=179.3
Q ss_pred EEEEEcccccceEEeeEEecCC-chhhhhhhhhhccCceEEEEEecCcceeEEEe--cCC--cceEEEcC-CCCEEEEEe
Q 024185 36 MIIEFFATSKGIRRGLFLSACL-QLMIALCLVLLTTALEYGIFVLMLASFQGILR--LRG--RPTVAFDQ-QGLVFAVAM 109 (271)
Q Consensus 36 ~~~~~~~~~~~~v~~~~~s~~~-~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~--~~~~~~~~-~~~~l~~~~ 109 (271)
...+.+.+|.+.|.+++|+|++ ++ +++++.||.|++||+.+++....+. +|. +.+++|+| ++++|++++
T Consensus 64 ~~~~~~~~h~~~v~~~~~~~~~~~~-----l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~ 138 (383)
T 3ei3_B 64 KLHRTASPFDRRVTSLEWHPTHPTT-----VAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSS 138 (383)
T ss_dssp EEEEEECCCSSCEEEEEECSSCTTE-----EEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEE
T ss_pred ceEEeccCCCCCEEEEEECCCCCCE-----EEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEe
Confidence 3455678999999999999999 66 8899999999999999888777775 353 56799999 779999999
Q ss_pred cCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEecCCeEEEEECCCCeEEEEeecCCCCCceeeEEEC
Q 024185 110 EAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFT 189 (271)
Q Consensus 110 ~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~ 189 (271)
.|+.|++||+++... .......+|...|.+++|+|++++|++++.|+.|++||+ +++.+..+..|... |.+++|+
T Consensus 139 ~d~~i~iwd~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~--v~~~~~~ 213 (383)
T 3ei3_B 139 IRGATTLRDFSGSVI--QVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAK--VTHAEFN 213 (383)
T ss_dssp TTTEEEEEETTSCEE--EEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSC--EEEEEEC
T ss_pred CCCEEEEEECCCCce--EEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCc--EEEEEEC
Confidence 999999999986332 111112344588999999999999999999999999998 57778888877765 9999999
Q ss_pred CCCC-EEEEecCCCcEEEEEcCC----ceeEEEecCCcceeEEEEEec-CCcEEEEeC--CeEEEEcCCCCCCCcC
Q 024185 190 PDGQ-YVVSGSGDGTLHAWNINT----RNEVACWNGNIGVVACLKWAP-RRAMFVAAS--SVLSFWIPNPSSNSTD 257 (271)
Q Consensus 190 ~~~~-~l~~~~~dg~i~iwd~~~----~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~--~~v~iw~~~~~~~~~~ 257 (271)
|+++ ++++++.|+.|++||+++ +..+..+ +|...|.+++|+| ++++|++++ +.|++||+++++....
T Consensus 214 ~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~ 288 (383)
T 3ei3_B 214 PRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQ 288 (383)
T ss_dssp SSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSE
T ss_pred CCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccc
Confidence 9999 999999999999999997 6666666 6899999999999 999999998 8899999998776543
No 68
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=4.9e-32 Score=225.82 Aligned_cols=228 Identities=13% Similarity=0.139 Sum_probs=197.2
Q ss_pred eeEEeeecceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEecC
Q 024185 12 QALLFARQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILRLR 91 (271)
Q Consensus 12 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 91 (271)
+.++.+..++.+..++...+ ..+..+.+|.+.|.++.|+|++ . +++++.||+|++||+++++.+..+.+|
T Consensus 133 ~~l~sgs~dg~i~vwd~~~~----~~~~~~~~h~~~V~~l~~~~~~-~-----l~s~s~dg~i~vwd~~~~~~~~~~~~h 202 (464)
T 3v7d_B 133 NYVITGADDKMIRVYDSINK----KFLLQLSGHDGGVWALKYAHGG-I-----LVSGSTDRTVRVWDIKKGCCTHVFEGH 202 (464)
T ss_dssp TEEEEEETTSCEEEEETTTT----EEEEEECCCSSCEEEEEECSTT-E-----EEEEETTSCEEEEETTTTEEEEEECCC
T ss_pred CEEEEEcCCCcEEEEECCCC----cEEEEEeCCCcCEEEEEEcCCC-E-----EEEEeCCCCEEEEECCCCcEEEEECCC
Confidence 45566677999999998777 5566688999999999999988 4 789999999999999999999999877
Q ss_pred C--cceEEEc--CCCCEEEEEecCCeEEEEeCCCCCCCcc-------------------eEEEecCCccceEEEEEcCCC
Q 024185 92 G--RPTVAFD--QQGLVFAVAMEAGAIKLFDSRSYDKGPF-------------------DTFLVGGDTAEVCDIKFSNDG 148 (271)
Q Consensus 92 ~--~~~~~~~--~~~~~l~~~~~d~~i~i~d~~~~~~~~~-------------------~~~~~~~~~~~v~~~~~s~~~ 148 (271)
. +.+++|+ ++++++++++.||.|++||+.+.+.... ....+.+|...+.++ ++++
T Consensus 203 ~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~ 280 (464)
T 3v7d_B 203 NSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHG 280 (464)
T ss_dssp SSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEET
T ss_pred CCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCC
Confidence 4 5667887 6789999999999999999987654111 144567888888877 6778
Q ss_pred cEEEEEecCCeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCCceeEEEecCCcceeEEE
Q 024185 149 KSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACL 228 (271)
Q Consensus 149 ~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~ 228 (271)
+++++++.|+.|++||+++++.+..+..|... +.+++|+|+++++++|+.||.|++||+++++.+..+.+|...|.++
T Consensus 281 ~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~--v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~ 358 (464)
T 3v7d_B 281 NIVVSGSYDNTLIVWDVAQMKCLYILSGHTDR--IYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLL 358 (464)
T ss_dssp TEEEEEETTSCEEEEETTTTEEEEEECCCSSC--EEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEE
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCCCC--EEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEE
Confidence 99999999999999999999999999887765 9999999999999999999999999999999999999999999999
Q ss_pred EEecCCcEEEEeC--CeEEEEcCCCCCCC
Q 024185 229 KWAPRRAMFVAAS--SVLSFWIPNPSSNS 255 (271)
Q Consensus 229 ~~s~~~~~l~~~~--~~v~iw~~~~~~~~ 255 (271)
+|+ +.+|++++ |.|++||+.++...
T Consensus 359 ~~~--~~~l~s~s~dg~v~vwd~~~~~~~ 385 (464)
T 3v7d_B 359 RLS--DKFLVSAAADGSIRGWDANDYSRK 385 (464)
T ss_dssp EEC--SSEEEEEETTSEEEEEETTTCCEE
T ss_pred EEc--CCEEEEEeCCCcEEEEECCCCcee
Confidence 997 57888887 88999999886543
No 69
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=6.4e-32 Score=220.94 Aligned_cols=238 Identities=11% Similarity=0.143 Sum_probs=188.5
Q ss_pred cceeEEeeecceeeEEEEeeccceeeEEEE---------EcccccceEEeeEEec-CCchhhhhhhhhhccCceEEEEEe
Q 024185 10 ITQALLFARQNIILILLESLCGIYQCMIIE---------FFATSKGIRRGLFLSA-CLQLMIALCLVLLTTALEYGIFVL 79 (271)
Q Consensus 10 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~v~~~~~s~-~~~~~~~~~l~s~~~dg~i~iwd~ 79 (271)
..+.++.+..++.+..++...+........ ...+|...+.++.|+| ++.. +++++.||.|++||+
T Consensus 55 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-----l~s~~~d~~i~iwd~ 129 (408)
T 4a11_B 55 EGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGM-----FTSSSFDKTLKVWDT 129 (408)
T ss_dssp TCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTC-----EEEEETTSEEEEEET
T ss_pred CCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcE-----EEEEeCCCeEEEeeC
Confidence 445666677799999999876543222110 0135889999999999 5556 789999999999999
Q ss_pred cCcceeEEEecC-CcceEEEcCC---CCEEEEEecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCc-EEEEE
Q 024185 80 MLASFQGILRLR-GRPTVAFDQQ---GLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGK-SMLLT 154 (271)
Q Consensus 80 ~~~~~~~~~~~~-~~~~~~~~~~---~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~ 154 (271)
++++....+... .+..+.++|. +.++++++.++.|++||+++++. ...+.+|...|.+++|+|+++ .++++
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~----~~~~~~~~~~v~~~~~~~~~~~ll~~~ 205 (408)
T 4a11_B 130 NTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSC----SHILQGHRQEILAVSWSPRYDYILATA 205 (408)
T ss_dssp TTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCC----CEEECCCCSCEEEEEECSSCTTEEEEE
T ss_pred CCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcce----eeeecCCCCcEEEEEECCCCCcEEEEE
Confidence 999988888754 3566888884 45999999999999999998876 566778999999999999998 58899
Q ss_pred ecCCeEEEEECCCCe-EEEEe---------------ecCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCCc------
Q 024185 155 TTNNNIYVLDAYGGE-KRCGF---------------SLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTR------ 212 (271)
Q Consensus 155 ~~d~~i~~~d~~~~~-~~~~~---------------~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~------ 212 (271)
+.||.|++||+++++ ....+ ..+. ..+.+++|+|+++++++++.||.|++||+.++
T Consensus 206 ~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 283 (408)
T 4a11_B 206 SADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHN--GKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVN 283 (408)
T ss_dssp ETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCS--SCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCC
T ss_pred cCCCcEEEEECCCCCcccccccccccccceeecccccccc--CceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceec
Confidence 999999999998765 33333 2233 45999999999999999999999999998654
Q ss_pred -----------------------------------------eeEEEecCCcceeEEEEEecCCcEEEEeC--CeEEEEcC
Q 024185 213 -----------------------------------------NEVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIP 249 (271)
Q Consensus 213 -----------------------------------------~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~~v~iw~~ 249 (271)
+.+..+.+|...|.+++|+|++++|++++ |.|++||+
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~ 363 (408)
T 4a11_B 284 YGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVP 363 (408)
T ss_dssp CCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEE
T ss_pred cccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeC
Confidence 34566778999999999999999999997 88999999
Q ss_pred CCCCCCcCC
Q 024185 250 NPSSNSTDE 258 (271)
Q Consensus 250 ~~~~~~~~~ 258 (271)
++++.....
T Consensus 364 ~~~~~~~~~ 372 (408)
T 4a11_B 364 SLYEPVPDD 372 (408)
T ss_dssp CC-------
T ss_pred CCCCccCCC
Confidence 998776543
No 70
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=3.1e-33 Score=226.27 Aligned_cols=209 Identities=8% Similarity=-0.043 Sum_probs=180.7
Q ss_pred cccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcc--eeEEEecCC--cceEEEcCCCCEEEEEecCCeEEE
Q 024185 41 FATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLAS--FQGILRLRG--RPTVAFDQQGLVFAVAMEAGAIKL 116 (271)
Q Consensus 41 ~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~--~~~~~~~~~~~~l~~~~~d~~i~i 116 (271)
+..|.+.+.+++|+|++++ +++++.|+.|++||+++++ .+..+..|. +.+++|+|++++|++++.||.|++
T Consensus 4 ~~~~~~~i~~~~~s~~~~~-----l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~v 78 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDRTQ-----IAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYV 78 (372)
T ss_dssp EESCSSCCCEEEECTTSSE-----EEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEE
T ss_pred ecccCCCeEEEEECCCCCE-----EEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEE
Confidence 5568899999999999998 8899999999999999987 788887774 567999999999999999999999
Q ss_pred EeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEecCCeEEEEECCCCeE---EEEe-ecCCCCCceeeEEECCCC
Q 024185 117 FDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEK---RCGF-SLEPSPNTNTEATFTPDG 192 (271)
Q Consensus 117 ~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~~~~~---~~~~-~~~~~~~~v~~~~~~~~~ 192 (271)
||+++++. .....+..|...|.+++|+|++++|++++.|+.|++||++.++. ...+ ..|. ..+.+++|+|++
T Consensus 79 wd~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~ 154 (372)
T 1k8k_C 79 WTLKGRTW--KPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIR--STVLSLDWHPNS 154 (372)
T ss_dssp EEEETTEE--EEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCC--SCEEEEEECTTS
T ss_pred EECCCCee--eeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccC--CCeeEEEEcCCC
Confidence 99987653 33445577899999999999999999999999999999987763 2222 3334 449999999999
Q ss_pred CEEEEecCCCcEEEEEc------------------CCceeEEEecCCcceeEEEEEecCCcEEEEeC--CeEEEEcCCCC
Q 024185 193 QYVVSGSGDGTLHAWNI------------------NTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNPS 252 (271)
Q Consensus 193 ~~l~~~~~dg~i~iwd~------------------~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~~v~iw~~~~~ 252 (271)
+++++++.||.|++||+ ..++.+..+.+|...|.+++|+|++++|++++ +.|++||++++
T Consensus 155 ~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~ 234 (372)
T 1k8k_C 155 VLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKK 234 (372)
T ss_dssp SEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGT
T ss_pred CEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCC
Confidence 99999999999999995 46788899999999999999999999999997 88999999888
Q ss_pred CCCcCC
Q 024185 253 SNSTDE 258 (271)
Q Consensus 253 ~~~~~~ 258 (271)
+.....
T Consensus 235 ~~~~~~ 240 (372)
T 1k8k_C 235 MAVATL 240 (372)
T ss_dssp TEEEEE
T ss_pred ceeEEE
Confidence 765444
No 71
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.3e-33 Score=227.08 Aligned_cols=227 Identities=16% Similarity=0.177 Sum_probs=185.1
Q ss_pred eeEEeeecceeeEEEEeeccceeeEEEEEcccccceEEeeE------EecCCchhhhhhhhhhccCceEEEEEecCcc-e
Q 024185 12 QALLFARQNIILILLESLCGIYQCMIIEFFATSKGIRRGLF------LSACLQLMIALCLVLLTTALEYGIFVLMLAS-F 84 (271)
Q Consensus 12 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~------~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~-~ 84 (271)
..++.+..++.+..++...+.. ....+.+|.+.+.++. |+|+++. +++++.||.|++||+++++ .
T Consensus 81 ~~l~~~~~dg~i~iwd~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~s~~~~~-----l~~~~~d~~i~vwd~~~~~~~ 152 (357)
T 3i2n_A 81 RYLATGDFGGNLHIWNLEAPEM---PVYSVKGHKEIINAIDGIGGLGIGEGAPE-----IVTGSRDGTVKVWDPRQKDDP 152 (357)
T ss_dssp CCEEEEETTSCEEEECTTSCSS---CSEEECCCSSCEEEEEEESGGGCC-CCCE-----EEEEETTSCEEEECTTSCSSC
T ss_pred ceEEEecCCCeEEEEeCCCCCc---cEEEEEecccceEEEeeccccccCCCccE-----EEEEeCCCeEEEEeCCCCCCc
Confidence 5566677789999998876631 2344788999999994 5788888 8899999999999999887 6
Q ss_pred eEEEecC------CcceEE----EcCCCCEEEEEecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcC---CCcEE
Q 024185 85 QGILRLR------GRPTVA----FDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSN---DGKSM 151 (271)
Q Consensus 85 ~~~~~~~------~~~~~~----~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~---~~~~l 151 (271)
+..+..+ .+.+++ |+|+++++++++.||.|++||+++++. .....|...+.+++|+| +++++
T Consensus 153 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~-----~~~~~~~~~v~~~~~~~~~~~~~~l 227 (357)
T 3i2n_A 153 VANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMAL-----RWETNIKNGVCSLEFDRKDISMNKL 227 (357)
T ss_dssp SEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEE-----EEEEECSSCEEEEEESCSSSSCCEE
T ss_pred ceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCce-----eeecCCCCceEEEEcCCCCCCCCEE
Confidence 6777543 244466 789999999999999999999998763 33356788999999999 99999
Q ss_pred EEEecCCeEEEEECCCCeEEEEee-----cCCCCCceeeEEECCCCC-EEEEecCCCcEEEEEcCCc-------------
Q 024185 152 LLTTTNNNIYVLDAYGGEKRCGFS-----LEPSPNTNTEATFTPDGQ-YVVSGSGDGTLHAWNINTR------------- 212 (271)
Q Consensus 152 ~~~~~d~~i~~~d~~~~~~~~~~~-----~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~------------- 212 (271)
++++.||.|++||+++++....+. .|... +.+++|+|+++ ++++++.||.|++||++++
T Consensus 228 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~--v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~ 305 (357)
T 3i2n_A 228 VATSLEGKFHVFDMRTQHPTKGFASVSEKAHKST--VWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEM 305 (357)
T ss_dssp EEEESTTEEEEEEEEEEETTTEEEEEEEECCSSC--EEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCC
T ss_pred EEECCCCeEEEEeCcCCCcccceeeeccCCCcCC--EEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCcc
Confidence 999999999999998876655443 55554 99999999998 8999999999999999754
Q ss_pred ------eeEEEecCCcceeEEEEEecCCcEEE-EeC--CeEEEEcCCCCC
Q 024185 213 ------NEVACWNGNIGVVACLKWAPRRAMFV-AAS--SVLSFWIPNPSS 253 (271)
Q Consensus 213 ------~~~~~~~~~~~~v~~~~~s~~~~~l~-~~~--~~v~iw~~~~~~ 253 (271)
+.+..+.+|...|.+++|+|++++|+ +++ +.|++||+.+.+
T Consensus 306 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~ 355 (357)
T 3i2n_A 306 GVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLN 355 (357)
T ss_dssp CCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC--
T ss_pred ccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCcc
Confidence 46777889999999999999999888 676 889999998754
No 72
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-32 Score=221.65 Aligned_cols=212 Identities=13% Similarity=0.100 Sum_probs=184.5
Q ss_pred EEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEecCC--cceEEEcCCCCEEEEEecCCeE
Q 024185 37 IIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILRLRG--RPTVAFDQQGLVFAVAMEAGAI 114 (271)
Q Consensus 37 ~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~d~~i 114 (271)
....+.+|.+.|.+++|+|++++ +++++.||.|++||+.+++.+..+..|. +.+++|+|++++|++++.||.|
T Consensus 24 ~~~~l~~h~~~v~~~~~s~~~~~-----l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i 98 (369)
T 3zwl_B 24 KAIKLTGHERPLTQVKYNKEGDL-----LFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSI 98 (369)
T ss_dssp EEEEEECCSSCEEEEEECTTSCE-----EEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEE
T ss_pred ccEEEEEeeceEEEEEEcCCCCE-----EEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeE
Confidence 34457899999999999999998 8899999999999999999999998775 5679999999999999999999
Q ss_pred EEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEecC-----CeEEEEECCCCe-----------EEEEeecCC
Q 024185 115 KLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTN-----NNIYVLDAYGGE-----------KRCGFSLEP 178 (271)
Q Consensus 115 ~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----~~i~~~d~~~~~-----------~~~~~~~~~ 178 (271)
++||+.+++. ...+. +...+.+++|+|+++++++++.+ +.|++||++.++ ....+..+.
T Consensus 99 ~iwd~~~~~~----~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (369)
T 3zwl_B 99 KLWDVSNGQC----VATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHE 173 (369)
T ss_dssp EEEETTTCCE----EEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCT
T ss_pred EEEECCCCcE----EEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCc
Confidence 9999998875 44444 77899999999999999999998 999999987653 233344444
Q ss_pred CCCceeeEEECCCCCEEEEecCCCcEEEEEcCC-ceeEEEecCCcceeEEEEEecCCcEEEEeC--CeEEEEcCCCCCCC
Q 024185 179 SPNTNTEATFTPDGQYVVSGSGDGTLHAWNINT-RNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNPSSNS 255 (271)
Q Consensus 179 ~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~~v~iw~~~~~~~~ 255 (271)
....+.+++|+|+++++++++.||.|++||+++ ++.+..+..|...|.+++|+|++++|++++ +.|++||+++++..
T Consensus 174 ~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~ 253 (369)
T 3zwl_B 174 GLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVL 253 (369)
T ss_dssp TCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE
T ss_pred CccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCcee
Confidence 433599999999999999999999999999998 788889999999999999999999999987 88999999987765
Q ss_pred cCC
Q 024185 256 TDE 258 (271)
Q Consensus 256 ~~~ 258 (271)
...
T Consensus 254 ~~~ 256 (369)
T 3zwl_B 254 KKY 256 (369)
T ss_dssp EEE
T ss_pred eee
Confidence 443
No 73
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=4.9e-33 Score=229.86 Aligned_cols=242 Identities=14% Similarity=0.230 Sum_probs=189.7
Q ss_pred eEEeeecceeeEEEEeeccc------eeeEEEEEcccccceEEeeEEecCCc-hhhhhhhhhhccCceEEEEEecCcce-
Q 024185 13 ALLFARQNIILILLESLCGI------YQCMIIEFFATSKGIRRGLFLSACLQ-LMIALCLVLLTTALEYGIFVLMLASF- 84 (271)
Q Consensus 13 ~l~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~v~~~~~s~~~~-~~~~~~l~s~~~dg~i~iwd~~~~~~- 84 (271)
.++.+..++.+..++..... ........+.+|...+.+++|+|++. . |++++.||.|++||+.++..
T Consensus 143 ~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~-----l~s~~~dg~i~vwd~~~~~~~ 217 (430)
T 2xyi_A 143 VIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGY-----LLSASDDHTICLWDINATPKE 217 (430)
T ss_dssp EEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTE-----EEEECTTSCEEEEETTSCCBG
T ss_pred EEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCe-----EEEEeCCCeEEEEeCCCCCCC
Confidence 34445668889998876510 00123345778999999999999998 5 78999999999999987321
Q ss_pred ------eEEEecCC--cceEEEcC-CCCEEEEEecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCc-EEEEE
Q 024185 85 ------QGILRLRG--RPTVAFDQ-QGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGK-SMLLT 154 (271)
Q Consensus 85 ------~~~~~~~~--~~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~ 154 (271)
...+..|. +.+++|+| ++.+|++++.||.|++||+++... ......+..|...|.+++|+|+++ +++++
T Consensus 218 ~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~-~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg 296 (430)
T 2xyi_A 218 HRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNT-SKPSHTVDAHTAEVNCLSFNPYSEFILATG 296 (430)
T ss_dssp GGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCS-SSCSEEEECCSSCEEEEEECSSCTTEEEEE
T ss_pred CceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCC-CcceeEeecCCCCeEEEEeCCCCCCEEEEE
Confidence 34455554 67799999 678999999999999999997631 011444568999999999999887 68899
Q ss_pred ecCCeEEEEECCC-CeEEEEeecCCCCCceeeEEECCCCC-EEEEecCCCcEEEEEcCC--------------ceeEEEe
Q 024185 155 TTNNNIYVLDAYG-GEKRCGFSLEPSPNTNTEATFTPDGQ-YVVSGSGDGTLHAWNINT--------------RNEVACW 218 (271)
Q Consensus 155 ~~d~~i~~~d~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iwd~~~--------------~~~~~~~ 218 (271)
+.||.|++||+++ ++.+..+..|... +.+++|+|+++ ++++++.||.|++||+.. .+.+..+
T Consensus 297 ~~dg~v~vwd~~~~~~~~~~~~~h~~~--v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 374 (430)
T 2xyi_A 297 SADKTVALWDLRNLKLKLHSFESHKDE--IFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIH 374 (430)
T ss_dssp ETTSEEEEEETTCTTSCSEEEECCSSC--EEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEEC
T ss_pred eCCCeEEEEeCCCCCCCeEEeecCCCC--EEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEc
Confidence 9999999999998 5667778777765 99999999985 689999999999999987 3677788
Q ss_pred cCCcceeEEEEEecCCc-EEEEeC--CeEEEEcCCCCCCCcCCCCCC
Q 024185 219 NGNIGVVACLKWAPRRA-MFVAAS--SVLSFWIPNPSSNSTDESTDP 262 (271)
Q Consensus 219 ~~~~~~v~~~~~s~~~~-~l~~~~--~~v~iw~~~~~~~~~~~~~~~ 262 (271)
.+|...|.+++|+|+++ ++++++ |.|++|++.......+....+
T Consensus 375 ~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~~~~~~~~~~~ 421 (430)
T 2xyi_A 375 GGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENVYNDEEPEIP 421 (430)
T ss_dssp CCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHHHHCC------
T ss_pred CCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccccccCCCccCC
Confidence 89999999999999999 788877 889999998765544444333
No 74
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.9e-32 Score=224.39 Aligned_cols=226 Identities=15% Similarity=0.180 Sum_probs=191.2
Q ss_pred eeEEeeecceeeEEEEeeccceeeEEEEEcc-cccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEec
Q 024185 12 QALLFARQNIILILLESLCGIYQCMIIEFFA-TSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILRL 90 (271)
Q Consensus 12 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 90 (271)
+.++.+..++.+..++...+.. ...+. .|...+.+++|+|+++. +++++.||.|++||+++++.+..+..
T Consensus 104 ~~l~~~~~d~~v~lw~~~~~~~----~~~~~~~~~~~v~~v~~s~~~~~-----l~~~~~dg~i~iwd~~~~~~~~~~~~ 174 (401)
T 4aez_A 104 LNVVAVALERNVYVWNADSGSV----SALAETDESTYVASVKWSHDGSF-----LSVGLGNGLVDIYDVESQTKLRTMAG 174 (401)
T ss_dssp TSEEEEEETTEEEEEETTTCCE----EEEEECCTTCCEEEEEECTTSSE-----EEEEETTSCEEEEETTTCCEEEEECC
T ss_pred CCEEEEECCCeEEEeeCCCCcE----eEeeecCCCCCEEEEEECCCCCE-----EEEECCCCeEEEEECcCCeEEEEecC
Confidence 5577777899999999877732 22233 37889999999999998 88999999999999999999999988
Q ss_pred CCc--ceEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEecCCeEEEEECCCC
Q 024185 91 RGR--PTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGG 168 (271)
Q Consensus 91 ~~~--~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~~~ 168 (271)
|.. .+++| +++++++++.||.|++||++.... ....+.+|.+.|.+++|+|++++|++++.|+.|++||++++
T Consensus 175 ~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~ 249 (401)
T 4aez_A 175 HQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANH---QIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSS 249 (401)
T ss_dssp CSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSC---EEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCS
T ss_pred CCCceEEEEE--CCCEEEEEcCCCCEEEEecccCcc---eeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCC
Confidence 764 44666 678999999999999999985442 25567789999999999999999999999999999999999
Q ss_pred eEEEEeecCCCCCceeeEEECCCCC-EEEEec--CCCcEEEEEcCCceeEEEecCCcceeEEEEEecCCcEEEE--eC--
Q 024185 169 EKRCGFSLEPSPNTNTEATFTPDGQ-YVVSGS--GDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVA--AS-- 241 (271)
Q Consensus 169 ~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~--~~-- 241 (271)
+....+..+... +.+++|+|++. ++++++ .|+.|++||+++++.+..+. +...|.+++|+|+++++++ |+
T Consensus 250 ~~~~~~~~~~~~--v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~g~~d 326 (401)
T 4aez_A 250 IPKFTKTNHNAA--VKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD-AGSQVTSLIWSPHSKEIMSTHGFPD 326 (401)
T ss_dssp SEEEEECCCSSC--CCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECTTT
T ss_pred CccEEecCCcce--EEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe-CCCcEEEEEECCCCCeEEEEeecCC
Confidence 988888777665 99999999765 555654 79999999999999999886 5677999999999999988 43
Q ss_pred CeEEEEcCCCCCC
Q 024185 242 SVLSFWIPNPSSN 254 (271)
Q Consensus 242 ~~v~iw~~~~~~~ 254 (271)
|.|++||+.+++.
T Consensus 327 g~i~v~~~~~~~~ 339 (401)
T 4aez_A 327 NNLSIWSYSSSGL 339 (401)
T ss_dssp CEEEEEEEETTEE
T ss_pred CcEEEEecCCccc
Confidence 8899999988543
No 75
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=5.7e-34 Score=235.83 Aligned_cols=206 Identities=11% Similarity=0.100 Sum_probs=167.1
Q ss_pred cccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEE--ecC--CcceEEEcC-CCCEEEEEecCCeEE
Q 024185 41 FATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGIL--RLR--GRPTVAFDQ-QGLVFAVAMEAGAIK 115 (271)
Q Consensus 41 ~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~--~~~--~~~~~~~~~-~~~~l~~~~~d~~i~ 115 (271)
..+|...|++++|+|....+ ||+|+.||.|++||+.+++....+ .+| .+.+++|+| ++++|++++.||+|+
T Consensus 115 ~~~~~~~V~~l~~~P~~~~~----lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~ 190 (435)
T 4e54_B 115 AAPFDRRATSLAWHPTHPST----VAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTR 190 (435)
T ss_dssp EEECSSCEEEEEECSSCTTC----EEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEE
T ss_pred CCCCCCCEEEEEEeCCCCCE----EEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEE
Confidence 45678889999999965432 779999999999999877654443 455 477899998 688999999999999
Q ss_pred EEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEecCCeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCC-E
Q 024185 116 LFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQ-Y 194 (271)
Q Consensus 116 i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~ 194 (271)
+||+++... ........+...+.+++|+|++++|++|+.||.|++||++. +.+..+..|... |.+++|+|+++ +
T Consensus 191 iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~-~~~~~~~~h~~~--v~~v~~~p~~~~~ 265 (435)
T 4e54_B 191 LQDFKGNIL--RVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDG-KELWNLRMHKKK--VTHVALNPCCDWF 265 (435)
T ss_dssp EEETTSCEE--EEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSS-CBCCCSBCCSSC--EEEEEECTTCSSE
T ss_pred EeeccCCce--eEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCc-ceeEEEecccce--EEeeeecCCCceE
Confidence 999986542 11111223345678999999999999999999999999864 556677777765 99999999976 7
Q ss_pred EEEecCCCcEEEEEcCCceeEEE---ecCCcceeEEEEEecCCcEEEEeC--CeEEEEcCCCCCCC
Q 024185 195 VVSGSGDGTLHAWNINTRNEVAC---WNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNPSSNS 255 (271)
Q Consensus 195 l~~~~~dg~i~iwd~~~~~~~~~---~~~~~~~v~~~~~s~~~~~l~~~~--~~v~iw~~~~~~~~ 255 (271)
+++++.|+.|++||+++.+.... ..+|...|++++|+|+|++|++++ +.|++||+.++...
T Consensus 266 ~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~ 331 (435)
T 4e54_B 266 LATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCP 331 (435)
T ss_dssp EEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSE
T ss_pred EEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccc
Confidence 88999999999999988765433 357899999999999999999998 88999999887654
No 76
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1e-31 Score=223.92 Aligned_cols=228 Identities=13% Similarity=0.199 Sum_probs=198.6
Q ss_pred eeEEeeecceeeEEEEeeccceeeEEEEEcccccceEEeeEEec--CCchhhhhhhhhhccCceEEEEEecCcce-----
Q 024185 12 QALLFARQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSA--CLQLMIALCLVLLTTALEYGIFVLMLASF----- 84 (271)
Q Consensus 12 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~--~~~~~~~~~l~s~~~dg~i~iwd~~~~~~----- 84 (271)
..++.+..++.+..++...+ .....+.+|.+.+.++.+++ ++.. +++++.||.|++||++++..
T Consensus 174 ~~l~s~s~dg~i~vwd~~~~----~~~~~~~~h~~~v~~l~~~~~~~~~~-----l~s~s~d~~i~vwd~~~~~~~~~~~ 244 (464)
T 3v7d_B 174 GILVSGSTDRTVRVWDIKKG----CCTHVFEGHNSTVRCLDIVEYKNIKY-----IVTGSRDNTLHVWKLPKESSVPDHG 244 (464)
T ss_dssp TEEEEEETTSCEEEEETTTT----EEEEEECCCSSCEEEEEEEESSSCEE-----EEEEETTSCEEEEECCCCCCC----
T ss_pred CEEEEEeCCCCEEEEECCCC----cEEEEECCCCCccEEEEEecCCCCCE-----EEEEcCCCcEEEeeCCCCccccccc
Confidence 36667788999999998777 45566889999999999984 6677 88999999999999987653
Q ss_pred ------------------eEEEecCCcceEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcC
Q 024185 85 ------------------QGILRLRGRPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSN 146 (271)
Q Consensus 85 ------------------~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 146 (271)
...+.+|...+.+++++++++++++.||.|++||+.+++. ...+.+|...|.+++|+|
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~----~~~~~~~~~~v~~~~~~~ 320 (464)
T 3v7d_B 245 EEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKC----LYILSGHTDRIYSTIYDH 320 (464)
T ss_dssp --CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEE----EEEECCCSSCEEEEEEET
T ss_pred ccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCCCeEEEEECCCCcE----EEEecCCCCCEEEEEEcC
Confidence 4456677777778889999999999999999999998775 667789999999999999
Q ss_pred CCcEEEEEecCCeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCCceeEEEecCCcceeE
Q 024185 147 DGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVA 226 (271)
Q Consensus 147 ~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~ 226 (271)
+++++++++.|+.|++||+++++.+..+..|... +.+++|+ ++++++++.||.|++||+.+++...... +...+.
T Consensus 321 ~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~--v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~~-~~~~~~ 395 (464)
T 3v7d_B 321 ERKRCISASMDTTIRIWDLENGELMYTLQGHTAL--VGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSYH-HTNLSA 395 (464)
T ss_dssp TTTEEEEEETTSCEEEEETTTTEEEEEECCCSSC--EEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEE-CTTCCC
T ss_pred CCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCc--EEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeeec-CCCCcc
Confidence 9999999999999999999999999999888766 9899997 5799999999999999999988777664 566788
Q ss_pred EEEEecCCcEEEEeC-CeEEEEcCCCCCCCcC
Q 024185 227 CLKWAPRRAMFVAAS-SVLSFWIPNPSSNSTD 257 (271)
Q Consensus 227 ~~~~s~~~~~l~~~~-~~v~iw~~~~~~~~~~ 257 (271)
.++|+|+++++++++ +.|++||++++++...
T Consensus 396 ~~~~~~~~~~l~~~~dg~i~iwd~~~g~~~~~ 427 (464)
T 3v7d_B 396 ITTFYVSDNILVSGSENQFNIYNLRSGKLVHA 427 (464)
T ss_dssp EEEEEECSSEEEEEETTEEEEEETTTCCEEES
T ss_pred EEEEEeCCCEEEEecCCeEEEEECCCCcEEeh
Confidence 899999999999998 9999999999987754
No 77
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.1e-33 Score=228.56 Aligned_cols=235 Identities=12% Similarity=0.118 Sum_probs=187.2
Q ss_pred cceeEEeeecceeeEEEEeec---cceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEec---Ccc
Q 024185 10 ITQALLFARQNIILILLESLC---GIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLM---LAS 83 (271)
Q Consensus 10 ~~~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~---~~~ 83 (271)
..+.++.+..++.+.+|+... +... .....+ .|.+.|.+++|+|+++. +++++.||.|++||++ +++
T Consensus 75 ~~~~l~s~s~dg~v~vwd~~~~~~~~~~-~~~~~~-~h~~~v~~~~~~~~~~~-----l~s~s~dg~i~vwd~~~~~~~~ 147 (437)
T 3gre_A 75 ETPYLITGSDQGVIKIWNLKEIIVGEVY-SSSLTY-DCSSTVTQITMIPNFDA-----FAVSSKDGQIIVLKVNHYQQES 147 (437)
T ss_dssp SSCEEEEEETTSEEEEEEHHHHHTTCCC-SCSEEE-ECSSCEEEEEECTTSSE-----EEEEETTSEEEEEEEEEEEETT
T ss_pred CCCEEEEecCCceEEEeECcccccCccc-ceeeec-cCCCCEEEEEEeCCCCE-----EEEEeCCCEEEEEEeccccCCc
Confidence 445666777899999999766 3211 001112 48899999999999998 8899999999999995 555
Q ss_pred eeEEEecCC--------------cceEE--EcCCCCEEEEEecCCeEEEEeCCCCCCCcceEEEecC--CccceEEEEEc
Q 024185 84 FQGILRLRG--------------RPTVA--FDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGG--DTAEVCDIKFS 145 (271)
Q Consensus 84 ~~~~~~~~~--------------~~~~~--~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~--~~~~v~~~~~s 145 (271)
....+..+. +.++. +++++++|++++.|+.|++||+++++. ...+.+ |...|.+++|+
T Consensus 148 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~----~~~~~~~~h~~~v~~~~~s 223 (437)
T 3gre_A 148 EVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLER----LQIIENSPRHGAVSSICID 223 (437)
T ss_dssp EEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCE----EEEEECCGGGCCEEEEEEC
T ss_pred eeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCee----eEEEccCCCCCceEEEEEC
Confidence 554443332 22233 567899999999999999999998775 555556 88999999999
Q ss_pred CCCcEEEEEecCCeEEEEECCCCeEEEEee-cCCCCCceeeEEEC----CCCCEEEEecCCCcEEEEEcCCceeEEEecC
Q 024185 146 NDGKSMLLTTTNNNIYVLDAYGGEKRCGFS-LEPSPNTNTEATFT----PDGQYVVSGSGDGTLHAWNINTRNEVACWNG 220 (271)
Q Consensus 146 ~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~-~~~~~~~v~~~~~~----~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 220 (271)
|++++|++++.||.|++||+++++.+..+. .+.. .|.+++|+ |+++++++++.||.|++||+++++.+..+.+
T Consensus 224 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~--~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 301 (437)
T 3gre_A 224 EECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHA--PITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFIN 301 (437)
T ss_dssp TTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCE--EEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEES
T ss_pred CCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCC--ceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEc
Confidence 999999999999999999999999988876 3443 48999555 5688999999999999999999998887754
Q ss_pred --------------------------CcceeEEEEEecCCcEEEEeC--CeEEEEcCCCCCCCcCC
Q 024185 221 --------------------------NIGVVACLKWAPRRAMFVAAS--SVLSFWIPNPSSNSTDE 258 (271)
Q Consensus 221 --------------------------~~~~v~~~~~s~~~~~l~~~~--~~v~iw~~~~~~~~~~~ 258 (271)
|...|++++|+ ++++|++++ +.|++||+.+++.....
T Consensus 302 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~ 366 (437)
T 3gre_A 302 SDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSKAV 366 (437)
T ss_dssp SSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCEEE
T ss_pred CCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccceEE
Confidence 45568889999 778999998 89999999988765443
No 78
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=1.1e-32 Score=228.51 Aligned_cols=208 Identities=14% Similarity=0.128 Sum_probs=170.5
Q ss_pred cccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcc-----------eeEEEecCC--------------cceEE
Q 024185 43 TSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLAS-----------FQGILRLRG--------------RPTVA 97 (271)
Q Consensus 43 ~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~-----------~~~~~~~~~--------------~~~~~ 97 (271)
.+.+.|.+++|+|++++ |++|+.||.|++||+.+++ ....+.+|. +.+++
T Consensus 26 ~~~~~V~~v~~s~~g~~-----la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~ 100 (447)
T 3dw8_B 26 AEADIISTVEFNHSGEL-----LATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIR 100 (447)
T ss_dssp CGGGSEEEEEECSSSSE-----EEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEE
T ss_pred cccCcEEEEEECCCCCE-----EEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEE
Confidence 35789999999999998 8999999999999998876 477777776 67799
Q ss_pred EcCCC--CEEEEEecCCeEEEEeCCCCCCCc----------------------c--------------eEEEecCCccce
Q 024185 98 FDQQG--LVFAVAMEAGAIKLFDSRSYDKGP----------------------F--------------DTFLVGGDTAEV 139 (271)
Q Consensus 98 ~~~~~--~~l~~~~~d~~i~i~d~~~~~~~~----------------------~--------------~~~~~~~~~~~v 139 (271)
|+|++ .+|++++.|+.|++||+.+++... + ......+|...|
T Consensus 101 ~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 180 (447)
T 3dw8_B 101 WLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHI 180 (447)
T ss_dssp ECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCC
T ss_pred EcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcce
Confidence 99998 799999999999999987532100 0 001136799999
Q ss_pred EEEEEcCCCcEEEEEecCCeEEEEECCC-CeEEEE-------eecCCCCCceeeEEECCCC-CEEEEecCCCcEEEEEcC
Q 024185 140 CDIKFSNDGKSMLLTTTNNNIYVLDAYG-GEKRCG-------FSLEPSPNTNTEATFTPDG-QYVVSGSGDGTLHAWNIN 210 (271)
Q Consensus 140 ~~~~~s~~~~~l~~~~~d~~i~~~d~~~-~~~~~~-------~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~ 210 (271)
.+++|+|++++|+++ .|+.|++||+++ ++.... +..|.. .|.+++|+|++ +++++|+.||.|++||++
T Consensus 181 ~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~ 257 (447)
T 3dw8_B 181 NSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTE--VITAAEFHPNSCNTFVYSSSKGTIRLCDMR 257 (447)
T ss_dssp CEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCC--CEEEEEECSSCTTEEEEEETTSCEEEEETT
T ss_pred EEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCc--ceEEEEECCCCCcEEEEEeCCCeEEEEECc
Confidence 999999999999998 799999999984 444442 334544 49999999998 999999999999999999
Q ss_pred Ccee----EEEecCCcc------------eeEEEEEecCCcEEEEeC-CeEEEEcCCC-CCCCcCC
Q 024185 211 TRNE----VACWNGNIG------------VVACLKWAPRRAMFVAAS-SVLSFWIPNP-SSNSTDE 258 (271)
Q Consensus 211 ~~~~----~~~~~~~~~------------~v~~~~~s~~~~~l~~~~-~~v~iw~~~~-~~~~~~~ 258 (271)
+++. +..+.+|.. .|.+++|+|++++|++++ +.|++||+++ +++....
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~v~iwd~~~~~~~~~~~ 323 (447)
T 3dw8_B 258 ASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDYLSVKVWDLNMENRPVETY 323 (447)
T ss_dssp TCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEESSEEEEEETTCCSSCSCCE
T ss_pred CCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeCCeEEEEeCCCCcccccee
Confidence 9887 788888876 899999999999999998 9999999987 6655444
No 79
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2e-32 Score=240.65 Aligned_cols=233 Identities=10% Similarity=0.126 Sum_probs=195.5
Q ss_pred ecceeEEeeecceeeEEEEeeccceeeEEEEEcccccceEEeeEEecC--CchhhhhhhhhhccCceEEEEEecCcc--e
Q 024185 9 PITQALLFARQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSAC--LQLMIALCLVLLTTALEYGIFVLMLAS--F 84 (271)
Q Consensus 9 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~~~~~~l~s~~~dg~i~iwd~~~~~--~ 84 (271)
|..+.++.+..++.+..++...+. ......+.+|.+.|.++.|+|+ ++. +++++.||.|++||+++++ .
T Consensus 19 ~dg~~latg~~dg~I~vwd~~~~~--~~~~~~l~~h~~~V~~l~~s~~~~~~~-----l~s~s~Dg~I~vwd~~~~~~~~ 91 (753)
T 3jro_A 19 YYGKRLATCSSDKTIKIFEVEGET--HKLIDTLTGHEGPVWRVDWAHPKFGTI-----LASCSYDGKVLIWKEENGRWSQ 91 (753)
T ss_dssp SSSCCEEEEETTTEEEEEEEETTE--EEEEEEECCCSSCEEEEEECCTTSCSE-----EEEEETTSCEEEEEEETTEEEE
T ss_pred CCCCeEEEEECCCcEEEEecCCCC--CccceeccCCcCceEEEEecCCCCCCE-----EEEEeCCCeEEEEECCCCcccc
Confidence 445667777789999999877432 2445668899999999999988 787 8899999999999999887 5
Q ss_pred eEEEecC--CcceEEEcCC--CCEEEEEecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcC-------------C
Q 024185 85 QGILRLR--GRPTVAFDQQ--GLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSN-------------D 147 (271)
Q Consensus 85 ~~~~~~~--~~~~~~~~~~--~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~-------------~ 147 (271)
...+..| .+.+++|+|+ ++.+++++.||.|++||+.++.. .....+.+|...|.+++|+| +
T Consensus 92 ~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~--~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d 169 (753)
T 3jro_A 92 IAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGT--TSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKE 169 (753)
T ss_dssp EEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSC--CCCEEEECCSSCEEEEEECCCC---------CGG
T ss_pred cccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCC--cceeEeecCCCceEEEEecCcccccccccccCCC
Confidence 6666666 4677999999 99999999999999999988754 23455678999999999999 5
Q ss_pred CcEEEEEecCCeEEEEECCCC----eEEEEeecCCCCCceeeEEECCC---CCEEEEecCCCcEEEEEcCCce-----eE
Q 024185 148 GKSMLLTTTNNNIYVLDAYGG----EKRCGFSLEPSPNTNTEATFTPD---GQYVVSGSGDGTLHAWNINTRN-----EV 215 (271)
Q Consensus 148 ~~~l~~~~~d~~i~~~d~~~~----~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~dg~i~iwd~~~~~-----~~ 215 (271)
++++++++.||.|++||++++ +....+..|... |.+++|+|+ ++++++++.||.|++||+++++ ..
T Consensus 170 ~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~--V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~ 247 (753)
T 3jro_A 170 SRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDW--VRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTL 247 (753)
T ss_dssp GCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSC--EEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCB
T ss_pred CCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCc--EEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEE
Confidence 899999999999999999877 455666666655 999999999 8999999999999999998864 23
Q ss_pred EEecCCcceeEEEEEecCCcEEEEeC--CeEEEEcCCCC
Q 024185 216 ACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNPS 252 (271)
Q Consensus 216 ~~~~~~~~~v~~~~~s~~~~~l~~~~--~~v~iw~~~~~ 252 (271)
.....|...|++++|+|+|+++++++ |.|++|++..+
T Consensus 248 ~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~ 286 (753)
T 3jro_A 248 LKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE 286 (753)
T ss_dssp SSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSS
T ss_pred eccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCC
Confidence 33456888999999999999999987 88999999854
No 80
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-31 Score=220.30 Aligned_cols=236 Identities=14% Similarity=0.126 Sum_probs=193.4
Q ss_pred ecce-eEEeeecceeeEEEEe----eccce--eeEEEEEccc----------ccceEEeeEEecCCchhhhhhhhhhccC
Q 024185 9 PITQ-ALLFARQNIILILLES----LCGIY--QCMIIEFFAT----------SKGIRRGLFLSACLQLMIALCLVLLTTA 71 (271)
Q Consensus 9 ~~~~-~l~~~~~~~~~~~~~~----~~~~~--~~~~~~~~~~----------~~~~v~~~~~s~~~~~~~~~~l~s~~~d 71 (271)
|... .++.+..++.+..++. ..+.. +......+.. |.+.+.+++|+|++++ |++++.|
T Consensus 55 ~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~-----l~~~~~d 129 (425)
T 1r5m_A 55 PLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNS-----IVTGVEN 129 (425)
T ss_dssp SSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSE-----EEEEETT
T ss_pred CCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCE-----EEEEeCC
Confidence 3344 5667777899999988 55531 0001222333 6779999999999998 8899999
Q ss_pred ceEEEEEecCcceeEEEecCC--cceEEEcCCCCEEEEEecCCeEEEEeCCCCCCCc-----------------------
Q 024185 72 LEYGIFVLMLASFQGILRLRG--RPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGP----------------------- 126 (271)
Q Consensus 72 g~i~iwd~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~----------------------- 126 (271)
|.|++|| .+++.+..+..|. +.+++|+|++++|++++.|+.|++||+.+++...
T Consensus 130 g~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (425)
T 1r5m_A 130 GELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSL 208 (425)
T ss_dssp SCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC---------------CCC
T ss_pred CeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcce
Confidence 9999999 6778888887774 5669999999999999999999999997654200
Q ss_pred -----------------------------ceEEEecCCccceEEEEEcCCCcEEEEEecCCeEEEEECCCCeEEEEeecC
Q 024185 127 -----------------------------FDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLE 177 (271)
Q Consensus 127 -----------------------------~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~ 177 (271)
.....+.+|...|.+++|+|++++|++++.|+.|++||+++++.+..+..+
T Consensus 209 ~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~ 288 (425)
T 1r5m_A 209 GVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGH 288 (425)
T ss_dssp BSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCC
T ss_pred eeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCC
Confidence 001234568889999999999999999999999999999999888888777
Q ss_pred CCCCceeeEEECCCCCEEEEecCCCcEEEEEcCCceeEEEecCCcceeEEEEEecCCcEEEEeC--CeEEEEcCCCCC
Q 024185 178 PSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNPSS 253 (271)
Q Consensus 178 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~~v~iw~~~~~~ 253 (271)
... +.+++|+|++ ++++++.|+.|++||+++++.+..+..|...|.+++|+|++++|++++ +.|++||+.+++
T Consensus 289 ~~~--i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~ 363 (425)
T 1r5m_A 289 SQS--IVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLN 363 (425)
T ss_dssp SSC--EEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHH
T ss_pred Ccc--EEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCc
Confidence 665 9999999999 999999999999999999999999999999999999999999999997 889999998765
No 81
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1e-31 Score=214.73 Aligned_cols=211 Identities=15% Similarity=0.190 Sum_probs=178.9
Q ss_pred EEEEcccccceEEeeEEecCC-chhhhhhhhhhccCceEEEEEecCcc-----eeEEEecCC--cceEEEcCCCCEEEEE
Q 024185 37 IIEFFATSKGIRRGLFLSACL-QLMIALCLVLLTTALEYGIFVLMLAS-----FQGILRLRG--RPTVAFDQQGLVFAVA 108 (271)
Q Consensus 37 ~~~~~~~~~~~v~~~~~s~~~-~~~~~~~l~s~~~dg~i~iwd~~~~~-----~~~~~~~~~--~~~~~~~~~~~~l~~~ 108 (271)
....+++|.+.|.+++|+|++ ++ |+||+.|++|++||+.+.+ +...+.+|. +.+++|+|++++|+++
T Consensus 30 l~~tL~GH~~~V~~v~~sp~~~~~-----l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~ 104 (340)
T 4aow_A 30 LRGTLKGHNGWVTQIATTPQFPDM-----ILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSG 104 (340)
T ss_dssp EEEEECCCSSCEEEEEECTTCTTE-----EEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred EEEEECCccCCEEEEEEeCCCCCE-----EEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEE
Confidence 345689999999999999985 56 8899999999999997653 455667664 6779999999999999
Q ss_pred ecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEecCCeEEEEECCCCeEEEE-eecCCCCCceeeEE
Q 024185 109 MEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCG-FSLEPSPNTNTEAT 187 (271)
Q Consensus 109 ~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~~~~~~~~-~~~~~~~~~v~~~~ 187 (271)
+.|+.|++|+...... ......+...+....+++++++|++++.|+.+++||......... ...+.. .+..++
T Consensus 105 ~~d~~i~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~--~v~~~~ 178 (340)
T 4aow_A 105 SWDGTLRLWDLTTGTT----TRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSE--WVSCVR 178 (340)
T ss_dssp ETTSEEEEEETTTTEE----EEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSS--CEEEEE
T ss_pred cccccceEEeecccce----eeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccC--cccceE
Confidence 9999999999987764 555567778899999999999999999999999999876654332 333443 488899
Q ss_pred ECCCC--CEEEEecCCCcEEEEEcCCceeEEEecCCcceeEEEEEecCCcEEEEeC--CeEEEEcCCCCCCCcCC
Q 024185 188 FTPDG--QYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNPSSNSTDE 258 (271)
Q Consensus 188 ~~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~~v~iw~~~~~~~~~~~ 258 (271)
|++++ .++++++.|+.|++||+++++.+..+.+|...|++++|+|++++|++++ +.|++||+++.+.....
T Consensus 179 ~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~ 253 (340)
T 4aow_A 179 FSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL 253 (340)
T ss_dssp ECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred EccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeee
Confidence 98774 5788999999999999999999999999999999999999999999998 89999999987655443
No 82
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-33 Score=231.40 Aligned_cols=232 Identities=12% Similarity=0.073 Sum_probs=190.2
Q ss_pred ceeEEeeecceeeEEEEeeccce-----eeEEEEEcccccceEEeeEEecC-CchhhhhhhhhhccCceEEEEEecCcce
Q 024185 11 TQALLFARQNIILILLESLCGIY-----QCMIIEFFATSKGIRRGLFLSAC-LQLMIALCLVLLTTALEYGIFVLMLASF 84 (271)
Q Consensus 11 ~~~l~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~v~~~~~s~~-~~~~~~~~l~s~~~dg~i~iwd~~~~~~ 84 (271)
...++.+..++.+..++...+.. .......+..|...+.+++|+|+ +.. +++++.||.|++||+++++.
T Consensus 126 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-----l~~~~~dg~v~iwd~~~~~~ 200 (416)
T 2pm9_A 126 DNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHV-----FASAGSSNFASIWDLKAKKE 200 (416)
T ss_dssp TTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTE-----EEEESSSSCEEEEETTTTEE
T ss_pred CCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcE-----EEEEcCCCCEEEEECCCCCc
Confidence 44556666788999988776531 11122234678899999999999 555 77999999999999999998
Q ss_pred eEEEecC--------CcceEEEcCCC-CEEEEEecCC---eEEEEeCCCCCCCcceEEEec-CCccceEEEEEcC-CCcE
Q 024185 85 QGILRLR--------GRPTVAFDQQG-LVFAVAMEAG---AIKLFDSRSYDKGPFDTFLVG-GDTAEVCDIKFSN-DGKS 150 (271)
Q Consensus 85 ~~~~~~~--------~~~~~~~~~~~-~~l~~~~~d~---~i~i~d~~~~~~~~~~~~~~~-~~~~~v~~~~~s~-~~~~ 150 (271)
+..+..+ .+.+++|+|++ .++++++.|+ .|++||+++... ....+. +|...|.+++|+| ++++
T Consensus 201 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~---~~~~~~~~~~~~v~~~~~s~~~~~~ 277 (416)
T 2pm9_A 201 VIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANT---PLQTLNQGHQKGILSLDWCHQDEHL 277 (416)
T ss_dssp EEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTS---CSBCCCSCCSSCEEEEEECSSCSSC
T ss_pred ceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCC---CcEEeecCccCceeEEEeCCCCCCe
Confidence 8888654 36679999997 6899999998 999999998642 134455 7999999999999 9999
Q ss_pred EEEEecCCeEEEEECCCCeEEEEeecCCCCCceeeEEECCCC-CEEEEecCCCcEEEEEcCCceeEEEec----------
Q 024185 151 MLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDG-QYVVSGSGDGTLHAWNINTRNEVACWN---------- 219 (271)
Q Consensus 151 l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~---------- 219 (271)
|++++.|+.|++||+++++.+..+..|... +.+++|+|++ +++++++.||.|++||+.+++......
T Consensus 278 l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~--v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~ 355 (416)
T 2pm9_A 278 LLSSGRDNTVLLWNPESAEQLSQFPARGNW--CFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESE 355 (416)
T ss_dssp EEEEESSSEEEEECSSSCCEEEEEECSSSC--CCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC-----------
T ss_pred EEEEeCCCCEEEeeCCCCccceeecCCCCc--eEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCc
Confidence 999999999999999999999999888766 8999999999 899999999999999998765422211
Q ss_pred -------------------------CCcceeEEEEEecCCcEEEEeC--CeEEEEcCCCC
Q 024185 220 -------------------------GNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNPS 252 (271)
Q Consensus 220 -------------------------~~~~~v~~~~~s~~~~~l~~~~--~~v~iw~~~~~ 252 (271)
.|..++.+++|+|+|++|++++ +.|++|++.+.
T Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~~~~ 415 (416)
T 2pm9_A 356 TDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKGVSITNPKIS 415 (416)
T ss_dssp -----------CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEECBCTTSSCBCCBCCCCC
T ss_pred ccccccccccccccccccccccCCccccCCccceEEeeCCeEEEEeCCCCeEEEEEeccC
Confidence 1566788999999999999998 88999999864
No 83
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-31 Score=210.85 Aligned_cols=231 Identities=13% Similarity=0.106 Sum_probs=189.3
Q ss_pred ecceeEEeeecceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEE
Q 024185 9 PITQALLFARQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGIL 88 (271)
Q Consensus 9 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 88 (271)
|....++.+..++.+..++....... .....+..|...+.++.+ +++. +++++.||.|++|| .++....+
T Consensus 69 ~~~~~l~~~~~dg~i~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~--~~~~-----l~~~~~d~~i~~~d--~~~~~~~~ 138 (313)
T 3odt_A 69 SEKELLLFGGKDTMINGVPLFATSGE-DPLYTLIGHQGNVCSLSF--QDGV-----VISGSWDKTAKVWK--EGSLVYNL 138 (313)
T ss_dssp TTTTEEEEEETTSCEEEEETTCCTTS-CC-CEECCCSSCEEEEEE--ETTE-----EEEEETTSEEEEEE--TTEEEEEE
T ss_pred CCCCEEEEecCCCeEEEEEeeecCCC-CcccchhhcccCEEEEEe--cCCE-----EEEEeCCCCEEEEc--CCcEEEec
Confidence 44566777778888888876654221 223446789999999998 4555 78999999999999 66777777
Q ss_pred ecCC--cceEEEcC-CCCEEEEEecCCeEEEEeCCCCCCCcceEEEecC-CccceEEEEEcCCCcEEEEEecCCeEEEEE
Q 024185 89 RLRG--RPTVAFDQ-QGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGG-DTAEVCDIKFSNDGKSMLLTTTNNNIYVLD 164 (271)
Q Consensus 89 ~~~~--~~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d 164 (271)
..|. +..++|+| +++++++++.||.|++||... . ...+.. |...+.+++|+|++. +++++.|+.|++||
T Consensus 139 ~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~--~----~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d 211 (313)
T 3odt_A 139 QAHNASVWDAKVVSFSENKFLTASADKTIKLWQNDK--V----IKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVD 211 (313)
T ss_dssp ECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETTE--E----EEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEE
T ss_pred ccCCCceeEEEEccCCCCEEEEEECCCCEEEEecCc--e----EEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEE
Confidence 7664 55588877 899999999999999999332 2 334445 889999999999998 99999999999999
Q ss_pred CCCCeEEEEeecCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCCceeEEEecCCcceeEEEEEecCCcEEEEeC-Ce
Q 024185 165 AYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS-SV 243 (271)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~~ 243 (271)
+++++.+..+..|... +.+++|+|++ .+++++.||.|++||+++++.+..+..|...|.+++|+|++++++++. +.
T Consensus 212 ~~~~~~~~~~~~~~~~--i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~ 288 (313)
T 3odt_A 212 MHTGDVLRTYEGHESF--VYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGDIIVGSSDNL 288 (313)
T ss_dssp TTTCCEEEEEECCSSC--EEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSCEEEEETTSC
T ss_pred CCchhhhhhhhcCCce--EEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCCEEEEeCCCc
Confidence 9999999999887766 9999999999 588999999999999999999999999999999999999999666555 89
Q ss_pred EEEEcCCCCCCCcCCC
Q 024185 244 LSFWIPNPSSNSTDES 259 (271)
Q Consensus 244 v~iw~~~~~~~~~~~~ 259 (271)
|++||+++++.....+
T Consensus 289 i~iw~~~~~~~~~~~~ 304 (313)
T 3odt_A 289 VRIFSQEKSRWASEDE 304 (313)
T ss_dssp EEEEESCGGGCCC---
T ss_pred EEEEeCCCCceeehhh
Confidence 9999999887766554
No 84
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-31 Score=222.62 Aligned_cols=199 Identities=11% Similarity=0.069 Sum_probs=168.8
Q ss_pred ccceEEeeEEecCCchhhhhhhhhhccCceEEEEEec--CcceeEEEe--cC--CcceEEEcCCCCEEEEEecCCeEEEE
Q 024185 44 SKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLM--LASFQGILR--LR--GRPTVAFDQQGLVFAVAMEAGAIKLF 117 (271)
Q Consensus 44 ~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~--~~~~~~~~~--~~--~~~~~~~~~~~~~l~~~~~d~~i~i~ 117 (271)
|.+.|.+++|+|+++.+ +++++.||.|++||+. +++.+..+. .+ .+.+++|+|++++|++++.+|.+++|
T Consensus 101 ~~~~v~~~~~s~d~~~l----~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~ 176 (450)
T 2vdu_B 101 IYSYIRNLRLTSDESRL----IACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSI 176 (450)
T ss_dssp CCCCEEEEEECTTSSEE----EEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred cCCceEEEEEcCCCCEE----EEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEE
Confidence 34479999999999983 2688999999999999 888888875 33 35679999999999999999999999
Q ss_pred eCCCCCCCcceEEEecCCccceEEEEEcCC---CcEEEEEecCCeEEEEECCCCeEEEE-eecCCCCCceeeEEECCCCC
Q 024185 118 DSRSYDKGPFDTFLVGGDTAEVCDIKFSND---GKSMLLTTTNNNIYVLDAYGGEKRCG-FSLEPSPNTNTEATFTPDGQ 193 (271)
Q Consensus 118 d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~---~~~l~~~~~d~~i~~~d~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~ 193 (271)
++.+.+........+.+|...|.+++|+|+ +++|++++.|+.|++||+++++.+.. +..|... |.+++|+ +++
T Consensus 177 ~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~--v~~~~~s-d~~ 253 (450)
T 2vdu_B 177 DINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHF--VSSICCG-KDY 253 (450)
T ss_dssp ETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSC--EEEEEEC-STT
T ss_pred ecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCc--eEEEEEC-CCC
Confidence 998776421012245678899999999999 99999999999999999999988777 4456554 9999999 999
Q ss_pred EEEEecCCCcEEEEEcCCceeEEEecCC-------------------------cceeEEEEEecCCcEEEEeC---CeEE
Q 024185 194 YVVSGSGDGTLHAWNINTRNEVACWNGN-------------------------IGVVACLKWAPRRAMFVAAS---SVLS 245 (271)
Q Consensus 194 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~-------------------------~~~v~~~~~s~~~~~l~~~~---~~v~ 245 (271)
+|++++.|+.|++||+++++.+..+..+ ...|.+++|+|++++|++++ +.|+
T Consensus 254 ~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~ 333 (450)
T 2vdu_B 254 LLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCII 333 (450)
T ss_dssp EEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEE
T ss_pred EEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEE
Confidence 9999999999999999999988887532 34689999999999988875 7799
Q ss_pred EEcC
Q 024185 246 FWIP 249 (271)
Q Consensus 246 iw~~ 249 (271)
+|++
T Consensus 334 iw~~ 337 (450)
T 2vdu_B 334 ILEM 337 (450)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9999
No 85
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=2.4e-31 Score=207.69 Aligned_cols=172 Identities=11% Similarity=0.065 Sum_probs=135.8
Q ss_pred cCceEEEEEe-cCcceeEEEecC--CcceEEEcC---CCCEEEEEecCCeEEEEeCCCCCCCcceEEEecCCc---cceE
Q 024185 70 TALEYGIFVL-MLASFQGILRLR--GRPTVAFDQ---QGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDT---AEVC 140 (271)
Q Consensus 70 ~dg~i~iwd~-~~~~~~~~~~~~--~~~~~~~~~---~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~---~~v~ 140 (271)
.|+.|++|++ .+++.+..+..| .+..++|++ ++.+|++++.|++|++||+++++. ...+.+|. ..+.
T Consensus 155 ~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~----l~tL~g~~~~v~~v~ 230 (356)
T 2w18_A 155 SDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQL----LKKMHIDDSYQASVC 230 (356)
T ss_dssp TTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCE----EEEEECCC---CCCE
T ss_pred CCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcE----EEEEcCCCcceeeeE
Confidence 3889999999 457777776655 466789988 779999999999999999999986 55555543 4677
Q ss_pred EEEEcCCCcEE------------EEEecCCeEEEEECCCCeEEEEee-----cCCCCCceeeEEECCCCCEEEEecCCCc
Q 024185 141 DIKFSNDGKSM------------LLTTTNNNIYVLDAYGGEKRCGFS-----LEPSPNTNTEATFTPDGQYVVSGSGDGT 203 (271)
Q Consensus 141 ~~~~s~~~~~l------------~~~~~d~~i~~~d~~~~~~~~~~~-----~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 203 (271)
+++|+|+|+++ ++|+.|+++++||..+++.+..+. +|.. .+.+. +.++.++++++.|++
T Consensus 231 ~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~--~~lsg--~~sg~~lASgS~DgT 306 (356)
T 2w18_A 231 HKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAG--RFLEG--DVKDHCAAAILTSGT 306 (356)
T ss_dssp EEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCC--CEEEE--EEETTEEEEEETTSC
T ss_pred EEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcc--eeEcc--ccCCCEEEEEcCCCc
Confidence 88999999986 567789999999999999877653 2222 24333 334789999999999
Q ss_pred EEEEEcCCceeEEEecCCcceeE-EEEEecCCcEEEEeC--CeEEEEcC
Q 024185 204 LHAWNINTRNEVACWNGNIGVVA-CLKWAPRRAMFVAAS--SVLSFWIP 249 (271)
Q Consensus 204 i~iwd~~~~~~~~~~~~~~~~v~-~~~~s~~~~~l~~~~--~~v~iw~~ 249 (271)
|+|||+.+++++.++.+|...+. .++|+|||++|++|+ ++|+|||+
T Consensus 307 IkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 307 IAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred EEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 99999999999999999987655 689999999999998 88999985
No 86
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1.9e-31 Score=246.16 Aligned_cols=230 Identities=16% Similarity=0.184 Sum_probs=201.0
Q ss_pred ecceeEEeeecceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEE
Q 024185 9 PITQALLFARQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGIL 88 (271)
Q Consensus 9 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 88 (271)
|..+.++.+..++.+..|+...+ ..+..+.+|.+.|.+++|+|++++ +++++.||.|++||+.+++.+..+
T Consensus 625 ~~~~~l~s~~~d~~i~vw~~~~~----~~~~~~~~h~~~v~~~~~s~~~~~-----l~s~~~d~~v~vwd~~~~~~~~~~ 695 (1249)
T 3sfz_A 625 QDGQRIASCGADKTLQVFKAETG----EKLLDIKAHEDEVLCCAFSSDDSY-----IATCSADKKVKIWDSATGKLVHTY 695 (1249)
T ss_dssp TTSSEEEEEETTSCEEEEETTTC----CEEEEECCCSSCEEEEEECTTSSE-----EEEEETTSEEEEEETTTCCEEEEE
T ss_pred CCCCEEEEEeCCCeEEEEECCCC----CEEEEeccCCCCEEEEEEecCCCE-----EEEEeCCCeEEEEECCCCceEEEE
Confidence 44556666778899999998777 445568899999999999999998 889999999999999999999999
Q ss_pred ecCC--cceEEEcC--CCCEEEEEecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEecCCeEEEEE
Q 024185 89 RLRG--RPTVAFDQ--QGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLD 164 (271)
Q Consensus 89 ~~~~--~~~~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d 164 (271)
.+|. +.+++|+| ++.++++++.|+.|++||+.+++. ...+.+|.+.|.+++|+|+++++++++.||.|++||
T Consensus 696 ~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~----~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd 771 (1249)
T 3sfz_A 696 DEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKEC----RNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWD 771 (1249)
T ss_dssp ECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSE----EEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEE
T ss_pred cCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcch----hheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEe
Confidence 8875 56799999 456899999999999999998875 667789999999999999999999999999999999
Q ss_pred CCCCeEEEEeecC-----------------------------------------------------CCCCceeeEEECCC
Q 024185 165 AYGGEKRCGFSLE-----------------------------------------------------PSPNTNTEATFTPD 191 (271)
Q Consensus 165 ~~~~~~~~~~~~~-----------------------------------------------------~~~~~v~~~~~~~~ 191 (271)
+++++....+... .+...+.+++|+|+
T Consensus 772 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~ 851 (1249)
T 3sfz_A 772 VRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPY 851 (1249)
T ss_dssp GGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSS
T ss_pred CCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCC
Confidence 9887655443210 11235788999999
Q ss_pred CCEEEEecCCCcEEEEEcCCceeEEEecCCcceeEEEEEecCCcEEEEeC--CeEEEEcCCC
Q 024185 192 GQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNP 251 (271)
Q Consensus 192 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~~v~iw~~~~ 251 (271)
++++++++.||.|++||+.++..+..+.+|...|.+++|+|++++|++++ +.+++|++.+
T Consensus 852 ~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~ 913 (1249)
T 3sfz_A 852 DHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKK 913 (1249)
T ss_dssp TTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHH
T ss_pred CCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccc
Confidence 99999999999999999999999999999999999999999999999998 8899999764
No 87
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.6e-31 Score=209.11 Aligned_cols=227 Identities=15% Similarity=0.145 Sum_probs=190.1
Q ss_pred ecceeEEeeecceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCc---cee
Q 024185 9 PITQALLFARQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLA---SFQ 85 (271)
Q Consensus 9 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~---~~~ 85 (271)
|..+.++.+..++.+..++...+ .....+..|.+.+.+++|+|+++. +++++.||.+++|++... +..
T Consensus 27 ~~~~~l~s~~~dg~v~vw~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~-----l~~~~~dg~i~~~~~~~~~~~~~~ 97 (313)
T 3odt_A 27 VDDSKVASVSRDGTVRLWSKDDQ----WLGTVVYTGQGFLNSVCYDSEKEL-----LLFGGKDTMINGVPLFATSGEDPL 97 (313)
T ss_dssp EETTEEEEEETTSEEEEEEESSS----EEEEEEEECSSCEEEEEEETTTTE-----EEEEETTSCEEEEETTCCTTSCC-
T ss_pred cCCCEEEEEEcCCcEEEEECCCC----EEEEEeecCCccEEEEEECCCCCE-----EEEecCCCeEEEEEeeecCCCCcc
Confidence 66677888888999999998666 444557788999999999999998 889999999999998654 456
Q ss_pred EEEecCCcc--eEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcC-CCcEEEEEecCCeEEE
Q 024185 86 GILRLRGRP--TVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSN-DGKSMLLTTTNNNIYV 162 (271)
Q Consensus 86 ~~~~~~~~~--~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~d~~i~~ 162 (271)
..+..|... +++| +++++++++.||.|++|| ..+. ...+..|...+.+++|+| +++++++++.|+.|++
T Consensus 98 ~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~----~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i 169 (313)
T 3odt_A 98 YTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSL----VYNLQAHNASVWDAKVVSFSENKFLTASADKTIKL 169 (313)
T ss_dssp CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEE----EEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEE
T ss_pred cchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcE----EEecccCCCceeEEEEccCCCCEEEEEECCCCEEE
Confidence 667777544 4666 788999999999999999 3332 556778999999999998 8999999999999999
Q ss_pred EECCCCeEEEEeec-CCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCCceeEEEecCCcceeEEEEEecCCcEEEEeC
Q 024185 163 LDAYGGEKRCGFSL-EPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS 241 (271)
Q Consensus 163 ~d~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 241 (271)
|| .++....+.. +.. .+.+++|+|+++ +++++.||.|++||+++++.+..+.+|...|.+++|+|++. |++++
T Consensus 170 ~d--~~~~~~~~~~~~~~--~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-l~~~~ 243 (313)
T 3odt_A 170 WQ--NDKVIKTFSGIHND--VVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNGD-IVSCG 243 (313)
T ss_dssp EE--TTEEEEEECSSCSS--CEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSC-EEEEE
T ss_pred Ee--cCceEEEEeccCcc--cEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCCC-EEEEe
Confidence 99 4566666665 444 499999999998 89999999999999999999999999999999999999995 55555
Q ss_pred --CeEEEEcCCCCCCCcCC
Q 024185 242 --SVLSFWIPNPSSNSTDE 258 (271)
Q Consensus 242 --~~v~iw~~~~~~~~~~~ 258 (271)
+.|++||+++++.....
T Consensus 244 ~dg~v~iwd~~~~~~~~~~ 262 (313)
T 3odt_A 244 EDRTVRIWSKENGSLKQVI 262 (313)
T ss_dssp TTSEEEEECTTTCCEEEEE
T ss_pred cCCEEEEEECCCCceeEEE
Confidence 89999999998765544
No 88
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=3.9e-32 Score=221.97 Aligned_cols=234 Identities=11% Similarity=0.039 Sum_probs=171.7
Q ss_pred eEEeeecceeeEEEEeeccceee-EEEEEcccccceEEeeEEec--------CCchhhhhhhhhhccCceEEEEEecCcc
Q 024185 13 ALLFARQNIILILLESLCGIYQC-MIIEFFATSKGIRRGLFLSA--------CLQLMIALCLVLLTTALEYGIFVLMLAS 83 (271)
Q Consensus 13 ~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~~~~~s~--------~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 83 (271)
.++.+..++.+.+++...+.... ..+..+.+|.+.|.+++|+| ++++ |++++.|++|++||++++.
T Consensus 103 ~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~-----las~s~D~tv~~Wd~~~~~ 177 (393)
T 4gq1_A 103 FLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQV-----IASVGDDCTLIIWRLTDEG 177 (393)
T ss_dssp EEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEE-----EEEEETTSEEEEEEEETTE
T ss_pred EEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCE-----EEEEECCCeEEEEECCCCc
Confidence 34455668999999987764322 23455789999999999998 6777 8999999999999999887
Q ss_pred eeEEEecCC--cceEEEcCCCC-EEEEEecCCeEEEEeCCCCCCCcc---------------------eEEEecCCccce
Q 024185 84 FQGILRLRG--RPTVAFDQQGL-VFAVAMEAGAIKLFDSRSYDKGPF---------------------DTFLVGGDTAEV 139 (271)
Q Consensus 84 ~~~~~~~~~--~~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~---------------------~~~~~~~~~~~v 139 (271)
.+..+..|. +.+++|+|++. +|++++.|++|++||+++++.... ......+|...+
T Consensus 178 ~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v 257 (393)
T 4gq1_A 178 PILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSL 257 (393)
T ss_dssp EEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSC
T ss_pred eeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccc
Confidence 776666553 56699999874 899999999999999987653110 011224677889
Q ss_pred EEEEEc-CCCcEEEEEecCCeEEEEECCCCeEEEEeecCCCC----------------CceeeEEECC--CCCEEEEecC
Q 024185 140 CDIKFS-NDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSP----------------NTNTEATFTP--DGQYVVSGSG 200 (271)
Q Consensus 140 ~~~~~s-~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~----------------~~v~~~~~~~--~~~~l~~~~~ 200 (271)
.++.|+ ||++.+++++.|+++++||+..++....+..+... .......++| ++.++++|+.
T Consensus 258 ~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~ 337 (393)
T 4gq1_A 258 ANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQ 337 (393)
T ss_dssp SEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETT
T ss_pred eeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECC
Confidence 999987 79999999999999999999887665554433221 1122234443 4457778899
Q ss_pred CCcEEEEEcCCceeEEEecCCcceeEEEEEecCCcEEEEeC-CeEEEEcCCC
Q 024185 201 DGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS-SVLSFWIPNP 251 (271)
Q Consensus 201 dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~~v~iw~~~~ 251 (271)
||.|++||+.+++.......|..+|.+++|+|||++||+++ +.+.+|.+..
T Consensus 338 Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~Gv~lvrL~g 389 (393)
T 4gq1_A 338 HGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGSVLLTRLMG 389 (393)
T ss_dssp TTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSEEEEEEEGG
T ss_pred CCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEEeC
Confidence 99999999999999888888999999999999999999998 7788887644
No 89
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=6e-32 Score=216.17 Aligned_cols=211 Identities=10% Similarity=0.145 Sum_probs=176.2
Q ss_pred EEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCc----ceeEEEecCC--cceEEEcC--CCCEEEEEec
Q 024185 39 EFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLA----SFQGILRLRG--RPTVAFDQ--QGLVFAVAME 110 (271)
Q Consensus 39 ~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~----~~~~~~~~~~--~~~~~~~~--~~~~l~~~~~ 110 (271)
+.+.+|.+.|.+++|+|++++ |++++.||.|++||++++ +....+..|. +.+++|+| ++++|++++.
T Consensus 5 ~~~~gH~~~v~~~~~~~~~~~-----l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~ 79 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYGRH-----VATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASY 79 (351)
T ss_dssp CEECCCSSCEEEEEECSSSSE-----EEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEET
T ss_pred ccCcccccceeEEEEcCCCCE-----EEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcC
Confidence 347899999999999999998 889999999999999876 3556666664 67799999 6999999999
Q ss_pred CCeEEEEeCCCCCCCc-----ceEEEecCCccceEEEEEcCC--CcEEEEEecCCeEEEEECCCCeEEEEeec-------
Q 024185 111 AGAIKLFDSRSYDKGP-----FDTFLVGGDTAEVCDIKFSND--GKSMLLTTTNNNIYVLDAYGGEKRCGFSL------- 176 (271)
Q Consensus 111 d~~i~i~d~~~~~~~~-----~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~d~~i~~~d~~~~~~~~~~~~------- 176 (271)
||.|++||+++++... .....+.+|...|.+++|+|+ ++++++++.|+.|++||+++++.+..+..
T Consensus 80 dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~ 159 (351)
T 3f3f_A 80 DKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVL 159 (351)
T ss_dssp TSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESC
T ss_pred CCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccccccccc
Confidence 9999999998764311 235567789999999999999 99999999999999999988765443321
Q ss_pred ----CCCCCceeeEEECCC---CCEEEEecCCCcEEEEEcCCcee--EEEecCCcceeEEEEEecCC----cEEEEeC--
Q 024185 177 ----EPSPNTNTEATFTPD---GQYVVSGSGDGTLHAWNINTRNE--VACWNGNIGVVACLKWAPRR----AMFVAAS-- 241 (271)
Q Consensus 177 ----~~~~~~v~~~~~~~~---~~~l~~~~~dg~i~iwd~~~~~~--~~~~~~~~~~v~~~~~s~~~----~~l~~~~-- 241 (271)
......+.+++|+|+ ++++++++.++.+.+|+...++. +..+.+|...|.+++|+|++ ++|++++
T Consensus 160 ~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~d 239 (351)
T 3f3f_A 160 SIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKD 239 (351)
T ss_dssp SCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETT
T ss_pred ccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCC
Confidence 122245899999997 99999999999998888877765 67788999999999999998 8899987
Q ss_pred CeEEEEcCCCCCC
Q 024185 242 SVLSFWIPNPSSN 254 (271)
Q Consensus 242 ~~v~iw~~~~~~~ 254 (271)
+.|++||++.+..
T Consensus 240 g~i~iwd~~~~~~ 252 (351)
T 3f3f_A 240 GRIRIFKITEKLS 252 (351)
T ss_dssp SCEEEEEEEECC-
T ss_pred CeEEEEeCCCCcC
Confidence 8899999987643
No 90
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1.2e-31 Score=230.38 Aligned_cols=234 Identities=12% Similarity=0.125 Sum_probs=196.5
Q ss_pred eeEEeeecceeeEEEEeeccceeeEEEEEcccccce-EEeeEEec--CCchhhhhhhhhhccCceEEEEEecCc------
Q 024185 12 QALLFARQNIILILLESLCGIYQCMIIEFFATSKGI-RRGLFLSA--CLQLMIALCLVLLTTALEYGIFVLMLA------ 82 (271)
Q Consensus 12 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~s~--~~~~~~~~~l~s~~~dg~i~iwd~~~~------ 82 (271)
+.++++. ++.+..++...+.........+.+|.+. |.+++|+| ++++ +++++.||.|++||+.++
T Consensus 31 ~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~-----l~s~~~dg~v~vw~~~~~~~~~~~ 104 (615)
T 1pgu_A 31 NAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQY-----LCSGDESGKVIVWGWTFDKESNSV 104 (615)
T ss_dssp TEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCE-----EEEEETTSEEEEEEEEEEGGGTEE
T ss_pred CEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCE-----EEEecCCCEEEEEeCCCCcccccc
Confidence 3444444 7788888876552111334558899999 99999999 9998 889999999999999855
Q ss_pred --ceeEEEecC--CcceEEEcCCCCEEEEEecC----CeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCc-EEEE
Q 024185 83 --SFQGILRLR--GRPTVAFDQQGLVFAVAMEA----GAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGK-SMLL 153 (271)
Q Consensus 83 --~~~~~~~~~--~~~~~~~~~~~~~l~~~~~d----~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~ 153 (271)
+....+..+ .+.+++|+|++++|++++.+ +.|++|| .++. ...+.+|...|.+++|+|+++ .+++
T Consensus 105 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~----~~~~~~~~~~v~~~~~~~~~~~~l~~ 178 (615)
T 1pgu_A 105 EVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNS----LGEVSGHSQRINACHLKQSRPMRSMT 178 (615)
T ss_dssp EEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCE----EEECCSCSSCEEEEEECSSSSCEEEE
T ss_pred cccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCc----ceeeecCCccEEEEEECCCCCcEEEE
Confidence 566666655 46679999999999999887 6899998 3333 566789999999999999998 7999
Q ss_pred EecCCeEEEEECCCCeEEEEeecCCCC-CceeeEEECCC-CCEEEEecCCCcEEEEEcCCceeEEEe-c---CCcceeEE
Q 024185 154 TTTNNNIYVLDAYGGEKRCGFSLEPSP-NTNTEATFTPD-GQYVVSGSGDGTLHAWNINTRNEVACW-N---GNIGVVAC 227 (271)
Q Consensus 154 ~~~d~~i~~~d~~~~~~~~~~~~~~~~-~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~-~---~~~~~v~~ 227 (271)
++.|+.|++||+++++.+..+..|... ..+.+++|+|+ ++++++++.||.|++||+++++.+..+ . .|...|.+
T Consensus 179 ~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~ 258 (615)
T 1pgu_A 179 VGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFA 258 (615)
T ss_dssp EETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEE
T ss_pred EeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEE
Confidence 999999999999999999998877761 13999999999 999999999999999999999999999 6 89999999
Q ss_pred EEEecCCcEEEEeC--CeEEEEcCCCCCCCcCC
Q 024185 228 LKWAPRRAMFVAAS--SVLSFWIPNPSSNSTDE 258 (271)
Q Consensus 228 ~~~s~~~~~l~~~~--~~v~iw~~~~~~~~~~~ 258 (271)
++|+ ++++|++++ +.+++||+++++.....
T Consensus 259 ~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~ 290 (615)
T 1pgu_A 259 LSWL-DSQKFATVGADATIRVWDVTTSKCVQKW 290 (615)
T ss_dssp EEES-SSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred EEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEE
Confidence 9999 999999997 88999999987655443
No 91
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=9.3e-32 Score=215.27 Aligned_cols=236 Identities=11% Similarity=0.033 Sum_probs=190.1
Q ss_pred ecceeEEeeecceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCc-hhhhhhhhhhccCceEEEEEe-cCcceeE
Q 024185 9 PITQALLFARQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQ-LMIALCLVLLTTALEYGIFVL-MLASFQG 86 (271)
Q Consensus 9 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~~~~~~l~s~~~dg~i~iwd~-~~~~~~~ 86 (271)
|..+.++.+..++.+..++...+..... ...+..|...+.+++|+|+++ . +++++.||.|++||+ ++++. .
T Consensus 21 ~~~~~l~~~~~d~~v~iw~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~-----l~~~~~dg~i~~wd~~~~~~~-~ 93 (342)
T 1yfq_A 21 PSKSLLLITSWDGSLTVYKFDIQAKNVD-LLQSLRYKHPLLCCNFIDNTDLQ-----IYVGTVQGEILKVDLIGSPSF-Q 93 (342)
T ss_dssp GGGTEEEEEETTSEEEEEEEETTTTEEE-EEEEEECSSCEEEEEEEESSSEE-----EEEEETTSCEEEECSSSSSSE-E
T ss_pred CCCCEEEEEcCCCeEEEEEeCCCCcccc-ceeeeecCCceEEEEECCCCCcE-----EEEEcCCCeEEEEEeccCCce-E
Confidence 4456677777899999999877642222 233457889999999999999 8 889999999999999 87765 5
Q ss_pred EEec--CC--cceEEEcCCCCEEEEEecCCeEEEEeCCC---------CCCCcceEEEecCCccceEEEEEcCCCcEEEE
Q 024185 87 ILRL--RG--RPTVAFDQQGLVFAVAMEAGAIKLFDSRS---------YDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLL 153 (271)
Q Consensus 87 ~~~~--~~--~~~~~~~~~~~~l~~~~~d~~i~i~d~~~---------~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 153 (271)
.+.. |. +.+++|+| ++++++++.|+.|++||+++ .+. ...+. |...+.+++|+|++ +++
T Consensus 94 ~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~----~~~~~-~~~~v~~~~~~~~~--l~~ 165 (342)
T 1yfq_A 94 ALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLN----SNNTK-VKNKIFTMDTNSSR--LIV 165 (342)
T ss_dssp ECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESC----SSSSS-SCCCEEEEEECSSE--EEE
T ss_pred eccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCe----eeEEe-eCCceEEEEecCCc--EEE
Confidence 6666 64 56799999 99999999999999999986 443 22233 78899999999987 999
Q ss_pred EecCCeEEEEECCC-CeEEEEeecCCCCCceeeEEECC-CCCEEEEecCCCcEEEEEcCCc------eeEEEecCCcc--
Q 024185 154 TTTNNNIYVLDAYG-GEKRCGFSLEPSPNTNTEATFTP-DGQYVVSGSGDGTLHAWNINTR------NEVACWNGNIG-- 223 (271)
Q Consensus 154 ~~~d~~i~~~d~~~-~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~------~~~~~~~~~~~-- 223 (271)
++.|+.|++||+++ ++.............+.+++|+| +++++++++.||.+++|+++.. +....+..|..
T Consensus 166 ~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (342)
T 1yfq_A 166 GMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNL 245 (342)
T ss_dssp EESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCT
T ss_pred EeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccc
Confidence 99999999999988 54322222222223499999999 9999999999999999999887 77888887755
Q ss_pred -------eeEEEEEecCCcEEEEeC--CeEEEEcCCCCCCCcCCC
Q 024185 224 -------VVACLKWAPRRAMFVAAS--SVLSFWIPNPSSNSTDES 259 (271)
Q Consensus 224 -------~v~~~~~s~~~~~l~~~~--~~v~iw~~~~~~~~~~~~ 259 (271)
.|.+++|+|++++|++++ |.|++||+.+++......
T Consensus 246 ~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~ 290 (342)
T 1yfq_A 246 KDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFA 290 (342)
T ss_dssp TCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECC
T ss_pred cccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhh
Confidence 899999999999999987 889999999887655443
No 92
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=3.5e-31 Score=212.91 Aligned_cols=233 Identities=13% Similarity=0.140 Sum_probs=184.7
Q ss_pred ecceeEEeee-c---ceeeEEEEeeccceeeEEEEEcccccceEEeeEEecC---CchhhhhhhhhhccCceEEEEEecC
Q 024185 9 PITQALLFAR-Q---NIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSAC---LQLMIALCLVLLTTALEYGIFVLML 81 (271)
Q Consensus 9 ~~~~~l~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~---~~~~~~~~l~s~~~dg~i~iwd~~~ 81 (271)
|....++.+. . ++.+..++...+..... ...+|...+.+++|+|+ +.. +++++.||.|++||+++
T Consensus 28 p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~---~~~~~~~~v~~~~~~~~~~~~~~-----l~~~~~dg~i~iwd~~~ 99 (357)
T 3i2n_A 28 PCSAKFVTMGNFARGTGVIQLYEIQHGDLKLL---REIEKAKPIKCGTFGATSLQQRY-----LATGDFGGNLHIWNLEA 99 (357)
T ss_dssp TTSSEEEEEEC--CCCEEEEEEEECSSSEEEE---EEEEESSCEEEEECTTCCTTTCC-----EEEEETTSCEEEECTTS
T ss_pred CCCceEEEecCccCCCcEEEEEeCCCCcccce---eeecccCcEEEEEEcCCCCCCce-----EEEecCCCeEEEEeCCC
Confidence 3344555444 2 78999998876632221 12367889999999999 577 88999999999999998
Q ss_pred cc-eeEEEecCC--cceE------EEcCCCCEEEEEecCCeEEEEeCCCCCCCcceEEEecCCcc----ceEEEE----E
Q 024185 82 AS-FQGILRLRG--RPTV------AFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTA----EVCDIK----F 144 (271)
Q Consensus 82 ~~-~~~~~~~~~--~~~~------~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~----~v~~~~----~ 144 (271)
++ .+..+..|. +.++ +|+|++++|++++.||.|++||+++++. + ...+..|.+ .+.+++ |
T Consensus 100 ~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~-~--~~~~~~~~~~~~~~v~~~~~~~~~ 176 (357)
T 3i2n_A 100 PEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDD-P--VANMEPVQGENKRDCWTVAFGNAY 176 (357)
T ss_dssp CSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSS-C--SEEECCCTTSCCCCEEEEEEECCC
T ss_pred CCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCC-c--ceeccccCCCCCCceEEEEEEecc
Confidence 88 788888775 4556 4578999999999999999999998762 1 333434433 788888 7
Q ss_pred cCCCcEEEEEecCCeEEEEECCCCeEEEEeecCCCCCceeeEEECC---CCCEEEEecCCCcEEEEEcCCceeEEEec--
Q 024185 145 SNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTP---DGQYVVSGSGDGTLHAWNINTRNEVACWN-- 219 (271)
Q Consensus 145 s~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-- 219 (271)
+|+++++++++.|+.|++||+++++.... ..+... +.+++|+| +++++++++.||.|++||+++++....+.
T Consensus 177 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~--v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 253 (357)
T 3i2n_A 177 NQEERVVCAGYDNGDIKLFDLRNMALRWE-TNIKNG--VCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASV 253 (357)
T ss_dssp C-CCCEEEEEETTSEEEEEETTTTEEEEE-EECSSC--EEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEE
T ss_pred CCCCCEEEEEccCCeEEEEECccCceeee-cCCCCc--eEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeee
Confidence 88999999999999999999999987554 334444 99999999 99999999999999999998877655444
Q ss_pred ---CCcceeEEEEEecCCc-EEEEeC--CeEEEEcCCCCCCC
Q 024185 220 ---GNIGVVACLKWAPRRA-MFVAAS--SVLSFWIPNPSSNS 255 (271)
Q Consensus 220 ---~~~~~v~~~~~s~~~~-~l~~~~--~~v~iw~~~~~~~~ 255 (271)
+|...|.+++|+|+++ +|++++ |.|++||++.+...
T Consensus 254 ~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 295 (357)
T 3i2n_A 254 SEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQR 295 (357)
T ss_dssp EEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC
T ss_pred ccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCccc
Confidence 8999999999999998 788887 88999999876544
No 93
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=2.3e-32 Score=223.94 Aligned_cols=235 Identities=11% Similarity=0.089 Sum_probs=188.5
Q ss_pred cceeEEeeecceeeEEEEeeccceee---EEEEEcccccceEEeeEEecCCc-hhhhhhhhhhccCceEEEEEecCccee
Q 024185 10 ITQALLFARQNIILILLESLCGIYQC---MIIEFFATSKGIRRGLFLSACLQ-LMIALCLVLLTTALEYGIFVLMLASFQ 85 (271)
Q Consensus 10 ~~~~l~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~v~~~~~s~~~~-~~~~~~l~s~~~dg~i~iwd~~~~~~~ 85 (271)
....++.+..++.+.+++...+.... .....+.+|...+.+++|+|++. . +++++.||.|++||+++++.+
T Consensus 93 ~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~-----l~s~~~dg~i~iwd~~~~~~~ 167 (402)
T 2aq5_A 93 NDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNV-----LLSAGCDNVILVWDVGTGAAV 167 (402)
T ss_dssp CTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTE-----EEEEETTSCEEEEETTTTEEE
T ss_pred CCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCE-----EEEEcCCCEEEEEECCCCCcc
Confidence 34556666778999999987652210 12344778999999999999984 5 789999999999999999999
Q ss_pred EEE--ecCC--cceEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcceEEEe-cCCccc-eEEEEEcCCCcEEEEE---ec
Q 024185 86 GIL--RLRG--RPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLV-GGDTAE-VCDIKFSNDGKSMLLT---TT 156 (271)
Q Consensus 86 ~~~--~~~~--~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-~~~~~~-v~~~~~s~~~~~l~~~---~~ 156 (271)
..+ ..|. +.+++|+|++++|++++.||.|++||+++++. ...+ .+|.+. +.++.|+|++++++++ +.
T Consensus 168 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~ 243 (402)
T 2aq5_A 168 LTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTV----VAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMS 243 (402)
T ss_dssp EEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEE----EEEEECSSCSSSCCEEEECSTTEEEEEEECTTC
T ss_pred EEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCce----eeeeccCCCCCcceEEEEcCCCcEEEEeccCCC
Confidence 888 5554 67799999999999999999999999998764 4455 577765 8999999999999999 78
Q ss_pred CCeEEEEECCCCeE-EEEeecCCCCCceeeEEECCCCCEEE-EecCCCcEEEEEcCCcee-EEEecC--CcceeEEEEEe
Q 024185 157 NNNIYVLDAYGGEK-RCGFSLEPSPNTNTEATFTPDGQYVV-SGSGDGTLHAWNINTRNE-VACWNG--NIGVVACLKWA 231 (271)
Q Consensus 157 d~~i~~~d~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~iwd~~~~~~-~~~~~~--~~~~v~~~~~s 231 (271)
|+.|++||+++++. ..... ......+.+++|+|++++++ +++.||.|++||+.+++. +..+.. |...|.+++|+
T Consensus 244 d~~i~iwd~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~s 322 (402)
T 2aq5_A 244 ERQVALWDTKHLEEPLSLQE-LDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYM 322 (402)
T ss_dssp CEEEEEEETTBCSSCSEEEE-CCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEEC
T ss_pred CceEEEEcCccccCCceEEe-ccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEe
Confidence 99999999988764 22222 22223489999999999986 556799999999998874 444433 55889999999
Q ss_pred cCCcEEEEeCCeEEEEcCCCCCC
Q 024185 232 PRRAMFVAASSVLSFWIPNPSSN 254 (271)
Q Consensus 232 ~~~~~l~~~~~~v~iw~~~~~~~ 254 (271)
|++.+++++++.+++|++.+++.
T Consensus 323 p~~~~~~s~~~~~~~~~l~~~~~ 345 (402)
T 2aq5_A 323 PKRGLEVNKCEIARFYKLHERKC 345 (402)
T ss_dssp CGGGSCGGGTEEEEEEEEETTEE
T ss_pred cccccceecceeEEEEEcCCCcE
Confidence 99999988778999999987643
No 94
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=8.9e-31 Score=216.68 Aligned_cols=223 Identities=13% Similarity=0.162 Sum_probs=190.2
Q ss_pred ceeEEeeecceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEec
Q 024185 11 TQALLFARQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILRL 90 (271)
Q Consensus 11 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 90 (271)
.+.++.+..++.+..++...+ .....+.+|.+.+.++.+ +++. +++|+.||.|++||+++++.+..+..
T Consensus 143 ~~~l~~g~~dg~i~iwd~~~~----~~~~~~~~h~~~v~~l~~--~~~~-----l~sg~~dg~i~vwd~~~~~~~~~~~~ 211 (435)
T 1p22_A 143 DQKIVSGLRDNTIKIWDKNTL----ECKRILTGHTGSVLCLQY--DERV-----IITGSSDSTVRVWDVNTGEMLNTLIH 211 (435)
T ss_dssp SSEEEEEESSSCEEEEESSSC----CEEEEECCCSSCEEEEEC--CSSE-----EEEEETTSCEEEEESSSCCEEEEECC
T ss_pred CCEEEEEeCCCeEEEEeCCCC----eEEEEEcCCCCcEEEEEE--CCCE-----EEEEcCCCeEEEEECCCCcEEEEEcC
Confidence 345666678999999998766 445568899999999888 6666 88999999999999999999999988
Q ss_pred CCcceEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEecCCeEEEEECCCCeE
Q 024185 91 RGRPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEK 170 (271)
Q Consensus 91 ~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~~~~~ 170 (271)
|.....++..+++.+++++.||.|++||+.+++. ......+.+|...|.+++| +++++++++.||.|++||+++++.
T Consensus 212 h~~~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~-~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~ 288 (435)
T 1p22_A 212 HCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTD-ITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEF 288 (435)
T ss_dssp CCSCEEEEECCTTEEEEEETTSCEEEEECSSSSC-CEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCE
T ss_pred CCCcEEEEEEcCCEEEEeeCCCcEEEEeCCCCCC-ceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcE
Confidence 8655433333567999999999999999988764 1122557789999999999 678999999999999999999999
Q ss_pred EEEeecCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCCceeEEEecCCcceeEEEEEecCCcEEEEeC--CeEEEEc
Q 024185 171 RCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWI 248 (271)
Q Consensus 171 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~~v~iw~ 248 (271)
+..+..|... +.++.+ +++++++|+.||.|++||+++++.+..+.+|...|.+++| ++.+|++++ |.|++||
T Consensus 289 ~~~~~~~~~~--v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd 362 (435)
T 1p22_A 289 VRTLNGHKRG--IACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWD 362 (435)
T ss_dssp EEEEECCSSC--EEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEE
T ss_pred EEEEcCCCCc--EEEEEe--CCCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeCCCcEEEEE
Confidence 9999887765 888888 5789999999999999999999999999999999999999 788899987 8899999
Q ss_pred CCCCC
Q 024185 249 PNPSS 253 (271)
Q Consensus 249 ~~~~~ 253 (271)
+.++.
T Consensus 363 ~~~~~ 367 (435)
T 1p22_A 363 LVAAL 367 (435)
T ss_dssp HHHHT
T ss_pred CCCCC
Confidence 97654
No 95
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=6.1e-31 Score=212.16 Aligned_cols=221 Identities=11% Similarity=0.037 Sum_probs=176.6
Q ss_pred eeEEeeecceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEec-
Q 024185 12 QALLFARQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILRL- 90 (271)
Q Consensus 12 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~- 90 (271)
..++.+..++.+.+++..... ......+.+|.+.+.+++|+|++++ |++++.||.|++||+++++.+.....
T Consensus 55 ~~l~~~~~dg~i~iw~~~~~~--~~~~~~~~~h~~~v~~~~~~~~~~~-----l~s~~~dg~v~iwd~~~~~~~~~~~~~ 127 (368)
T 3mmy_A 55 NFLIAGSWANDVRCWEVQDSG--QTIPKAQQMHTGPVLDVCWSDDGSK-----VFTASCDKTAKMWDLSSNQAIQIAQHD 127 (368)
T ss_dssp EEEEEEETTSEEEEEEECTTS--CEEEEEEEECSSCEEEEEECTTSSE-----EEEEETTSEEEEEETTTTEEEEEEECS
T ss_pred eEEEEECCCCcEEEEEcCCCC--ceeEEEeccccCCEEEEEECcCCCE-----EEEEcCCCcEEEEEcCCCCceeecccc
Confidence 566777779999999987621 1233557789999999999999998 88999999999999999887764432
Q ss_pred CCcceEEE--cCCCCEEEEEecCCeEEEEeCCCCCCCcceEEEec-----------------------------------
Q 024185 91 RGRPTVAF--DQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVG----------------------------------- 133 (271)
Q Consensus 91 ~~~~~~~~--~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~----------------------------------- 133 (271)
..+.+++| +|++++|++++.||.|++||+++++. .......
T Consensus 128 ~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 205 (368)
T 3mmy_A 128 APVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNP--MMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFR 205 (368)
T ss_dssp SCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSC--SEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEE
T ss_pred CceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcE--EEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhh
Confidence 24677999 89999999999999999999988764 2222111
Q ss_pred ----CCccceEEEEEcCCCcE----EEEEecCCeEEEEECCCC---eEEEEeecCCCC----------CceeeEEECCCC
Q 024185 134 ----GDTAEVCDIKFSNDGKS----MLLTTTNNNIYVLDAYGG---EKRCGFSLEPSP----------NTNTEATFTPDG 192 (271)
Q Consensus 134 ----~~~~~v~~~~~s~~~~~----l~~~~~d~~i~~~d~~~~---~~~~~~~~~~~~----------~~v~~~~~~~~~ 192 (271)
.+.....++.+.++... +++++.|+.|++||++.. +....+..+... ..+.+++|+|++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~ 285 (368)
T 3mmy_A 206 RIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVH 285 (368)
T ss_dssp ECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTT
T ss_pred hccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCC
Confidence 01133445555554443 999999999999999887 445566655431 149999999999
Q ss_pred CEEEEecCCCcEEEEEcCCceeEEEecCCcceeEEEEEecCCcEEEEeC
Q 024185 193 QYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS 241 (271)
Q Consensus 193 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 241 (271)
++|++++.||.|++||+++++.+..+.+|...|.+++|+|+|++|++++
T Consensus 286 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s 334 (368)
T 3mmy_A 286 GTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYAS 334 (368)
T ss_dssp CCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEE
T ss_pred CEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEe
Confidence 9999999999999999999999999999999999999999999999997
No 96
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.9e-32 Score=237.25 Aligned_cols=206 Identities=14% Similarity=0.222 Sum_probs=175.4
Q ss_pred EEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEec--CcceeEEEecCC--cceEEEcCC--CCEEEEEecCC
Q 024185 39 EFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLM--LASFQGILRLRG--RPTVAFDQQ--GLVFAVAMEAG 112 (271)
Q Consensus 39 ~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~--~~~~~~~~~~~~--~~~~~~~~~--~~~l~~~~~d~ 112 (271)
..+.+|.+.|.+++|+|+++. +++|+.||.|++||+. +++....+.+|. +.+++|+|+ +++|++|+.||
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~-----latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg 77 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKR-----LATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDG 77 (753)
T ss_dssp -----CCCCEEEECCCSSSCC-----EEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTS
T ss_pred eecccCcceeEEEEECCCCCe-----EEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCC
Confidence 457899999999999999998 8899999999999998 556777787774 667999988 99999999999
Q ss_pred eEEEEeCCCCCCCcceEEEecCCccceEEEEEcCC--CcEEEEEecCCeEEEEECCCCeE--EEEeecCCCCCceeeEEE
Q 024185 113 AIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSND--GKSMLLTTTNNNIYVLDAYGGEK--RCGFSLEPSPNTNTEATF 188 (271)
Q Consensus 113 ~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~d~~i~~~d~~~~~~--~~~~~~~~~~~~v~~~~~ 188 (271)
.|++||+.+++. .....+.+|...|.+++|+|+ ++.+++++.||.|++||++++.. ...+..+.. .+.+++|
T Consensus 78 ~I~vwd~~~~~~--~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~--~v~~l~~ 153 (753)
T 3jro_A 78 KVLIWKEENGRW--SQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAI--GVNSASW 153 (753)
T ss_dssp CEEEEEEETTEE--EEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSS--CEEEEEE
T ss_pred eEEEEECCCCcc--cccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCC--ceEEEEe
Confidence 999999988752 235667789999999999999 99999999999999999988743 334444554 4999999
Q ss_pred CC-------------CCCEEEEecCCCcEEEEEcCCc----eeEEEecCCcceeEEEEEecC---CcEEEEeC--CeEEE
Q 024185 189 TP-------------DGQYVVSGSGDGTLHAWNINTR----NEVACWNGNIGVVACLKWAPR---RAMFVAAS--SVLSF 246 (271)
Q Consensus 189 ~~-------------~~~~l~~~~~dg~i~iwd~~~~----~~~~~~~~~~~~v~~~~~s~~---~~~l~~~~--~~v~i 246 (271)
+| +++++++|+.||.|++||++++ .....+.+|...|.+++|+|+ ++++++++ |.|++
T Consensus 154 ~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~i 233 (753)
T 3jro_A 154 APATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCII 233 (753)
T ss_dssp CCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEE
T ss_pred cCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEE
Confidence 99 5899999999999999999876 566778899999999999999 89999998 88999
Q ss_pred EcCCCCC
Q 024185 247 WIPNPSS 253 (271)
Q Consensus 247 w~~~~~~ 253 (271)
||+.++.
T Consensus 234 wd~~~~~ 240 (753)
T 3jro_A 234 WTQDNEQ 240 (753)
T ss_dssp EEESSSS
T ss_pred ecCCCCC
Confidence 9998864
No 97
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.3e-32 Score=229.85 Aligned_cols=229 Identities=13% Similarity=0.062 Sum_probs=176.6
Q ss_pred eEEeeecceeeEEEEeecccee-------eEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcc-e
Q 024185 13 ALLFARQNIILILLESLCGIYQ-------CMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLAS-F 84 (271)
Q Consensus 13 ~l~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~-~ 84 (271)
.|+.+..++.+.+++...+... ......+.+|...+.+++|++++ . |++|+.||+|++||++++. +
T Consensus 227 ~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~-----lasgs~DgtV~lWD~~~~~~~ 300 (524)
T 2j04_B 227 CLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-T-----VVCGFKNGFVAEFDLTDPEVP 300 (524)
T ss_dssp EEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-E-----EEEEETTSEEEEEETTBCSSC
T ss_pred eEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-e-----EEEEeCCCEEEEEECCCCCCc
Confidence 4445667899999987654211 00112467889999999999865 4 7899999999999998764 4
Q ss_pred eEEEecCC--cceE--EEcCCC-CEEEEEecCCeEEEEeCCCCCCCcceEEEecCCc--cceEEEEEcCCCcEEEEEecC
Q 024185 85 QGILRLRG--RPTV--AFDQQG-LVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDT--AEVCDIKFSNDGKSMLLTTTN 157 (271)
Q Consensus 85 ~~~~~~~~--~~~~--~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~--~~v~~~~~s~~~~~l~~~~~d 157 (271)
...+.+|. +.++ +|+|++ ++|++++.|++|++||+++++. ...+.+|. ..|.+++|+|+++.+++++.|
T Consensus 301 ~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~----~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d 376 (524)
T 2j04_B 301 SFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIAT----TKTTVSRFRGSNLVPVVYCPQIYSYIYSDGA 376 (524)
T ss_dssp SEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHH----HCEEEEECSCCSCCCEEEETTTTEEEEECSS
T ss_pred eEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCc----ccccccccccCcccceEeCCCcCeEEEeCCC
Confidence 55677775 5556 568887 8999999999999999987654 22333443 248899999999999999999
Q ss_pred CeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCC--------------------------
Q 024185 158 NNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINT-------------------------- 211 (271)
Q Consensus 158 ~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~-------------------------- 211 (271)
++|++||+++++++..+.+|... |.+++|+|+|++|++|+.||+|++||+..
T Consensus 377 ~tv~lwd~~~~~~~~~l~gH~~~--V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~ 454 (524)
T 2j04_B 377 SSLRAVPSRAAFAVHPLVSRETT--ITAIGVSRLHPMVLAGSADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIK 454 (524)
T ss_dssp SEEEEEETTCTTCCEEEEECSSC--EEEEECCSSCCBCEEEETTTEEECCBSCSSTTTCC------CCCCEEEECBCCSS
T ss_pred CcEEEEECcccccceeeecCCCc--eEEEEeCCCCCeEEEEECCCEEEEEechHhhccccccCccceeeeEEEEeccCCC
Confidence 99999999999888888888766 99999999999999999999999987521
Q ss_pred ------------------ceeEEEecCCcceeEEEEEecCCc---EEEEeC--CeEEEEcCCCCC
Q 024185 212 ------------------RNEVACWNGNIGVVACLKWAPRRA---MFVAAS--SVLSFWIPNPSS 253 (271)
Q Consensus 212 ------------------~~~~~~~~~~~~~v~~~~~s~~~~---~l~~~~--~~v~iw~~~~~~ 253 (271)
+..+..+.+|...|.+++|+|++. ++++|+ |.|+||++....
T Consensus 455 g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~~~ 519 (524)
T 2j04_B 455 DDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEYLSLEH 519 (524)
T ss_dssp SCEEEECCCCCCCC-------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEECSCC-
T ss_pred CCeEEccCCceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCceEEEEEccccc
Confidence 111223456788899999999964 899987 899999987643
No 98
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.5e-31 Score=217.46 Aligned_cols=230 Identities=13% Similarity=0.157 Sum_probs=182.4
Q ss_pred ecceeEEeeecceeeEEEEee---ccceee----EEEEE--ccc--ccceEEeeE--EecCCchhhhhhhhhhccCceEE
Q 024185 9 PITQALLFARQNIILILLESL---CGIYQC----MIIEF--FAT--SKGIRRGLF--LSACLQLMIALCLVLLTTALEYG 75 (271)
Q Consensus 9 ~~~~~l~~~~~~~~~~~~~~~---~~~~~~----~~~~~--~~~--~~~~v~~~~--~s~~~~~~~~~~l~s~~~dg~i~ 75 (271)
|..+.++.+..++.+..++.. .+.... ..++. +.. +...+.++. +++++.. +++++.||.|+
T Consensus 121 ~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-----l~~~~~d~~i~ 195 (437)
T 3gre_A 121 PNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSL-----LVALTNLSRVI 195 (437)
T ss_dssp TTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEE-----EEEEETTSEEE
T ss_pred CCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCE-----EEEEeCCCeEE
Confidence 445667777888999999874 221110 11111 222 445566666 5577887 88999999999
Q ss_pred EEEecCcceeEEEec--C--CcceEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcceEEEec-CCccceEEEEEcC----
Q 024185 76 IFVLMLASFQGILRL--R--GRPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVG-GDTAEVCDIKFSN---- 146 (271)
Q Consensus 76 iwd~~~~~~~~~~~~--~--~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~-~~~~~v~~~~~s~---- 146 (271)
+||+++++.+..+.. | .+.+++|+|++++|++|+.||.|++||+++++. ...+. .|...|.+++|+|
T Consensus 196 iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~----~~~~~~~~~~~v~~~~~~~~~s~ 271 (437)
T 3gre_A 196 IFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVL----IRSWSFGDHAPITHVEVCQFYGK 271 (437)
T ss_dssp EEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEE----EEEEBCTTCEEEEEEEECTTTCT
T ss_pred EEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccE----EEEEecCCCCceEEEEeccccCC
Confidence 999999999999976 3 467799999999999999999999999998664 44443 6778999996654
Q ss_pred CCcEEEEEecCCeEEEEECCCCeEEEEeecCC------------------------CCCceeeEEECCCCCEEEEecCCC
Q 024185 147 DGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEP------------------------SPNTNTEATFTPDGQYVVSGSGDG 202 (271)
Q Consensus 147 ~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~------------------------~~~~v~~~~~~~~~~~l~~~~~dg 202 (271)
++.+|++++.|+.|++||+++++.+..+..+. +...|.+++|+ ++++|++|+.||
T Consensus 272 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~ 350 (437)
T 3gre_A 272 NSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATS 350 (437)
T ss_dssp TEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGT
T ss_pred CccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCC
Confidence 68899999999999999999999888887553 22347888998 778999999999
Q ss_pred cEEEEEcCCceeEEEecC-------------------------------------CcceeEEEEEecC--CcEEEEeC--
Q 024185 203 TLHAWNINTRNEVACWNG-------------------------------------NIGVVACLKWAPR--RAMFVAAS-- 241 (271)
Q Consensus 203 ~i~iwd~~~~~~~~~~~~-------------------------------------~~~~v~~~~~s~~--~~~l~~~~-- 241 (271)
.|++||+.+++....+.+ |...|++++|+++ +.+|++++
T Consensus 351 ~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~d 430 (437)
T 3gre_A 351 SIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNS 430 (437)
T ss_dssp EEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETT
T ss_pred eEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCC
Confidence 999999999888777665 7889999999998 77999998
Q ss_pred CeEEEEc
Q 024185 242 SVLSFWI 248 (271)
Q Consensus 242 ~~v~iw~ 248 (271)
|.|++|+
T Consensus 431 G~I~iw~ 437 (437)
T 3gre_A 431 GLIGIFQ 437 (437)
T ss_dssp SCEEEEC
T ss_pred ceEEEeC
Confidence 8999995
No 99
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=2.7e-31 Score=214.19 Aligned_cols=214 Identities=14% Similarity=0.132 Sum_probs=174.8
Q ss_pred EEEEEcccccceEEeeEEecC---CchhhhhhhhhhccCceEEEEEecC-ccee-EEEecCC--cceEEEcCCCCEEEEE
Q 024185 36 MIIEFFATSKGIRRGLFLSAC---LQLMIALCLVLLTTALEYGIFVLML-ASFQ-GILRLRG--RPTVAFDQQGLVFAVA 108 (271)
Q Consensus 36 ~~~~~~~~~~~~v~~~~~s~~---~~~~~~~~l~s~~~dg~i~iwd~~~-~~~~-~~~~~~~--~~~~~~~~~~~~l~~~ 108 (271)
..++.+.+|.+.|.+++|+|+ ++. |++++.||.|++||+++ +..+ ..+..|. +.+++|+|++++|+++
T Consensus 30 ~~~~~~~~h~~~v~~~~~~~~~~~g~~-----l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~ 104 (368)
T 3mmy_A 30 KDIEVTSSPDDSIGCLSFSPPTLPGNF-----LIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTA 104 (368)
T ss_dssp CCEECSSCCSSCEEEEEECCTTSSSEE-----EEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEE
T ss_pred ceeEeccCCCCceEEEEEcCCCCCceE-----EEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEE
Confidence 345668999999999999999 577 88999999999999987 5544 6666664 6779999999999999
Q ss_pred ecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEE--cCCCcEEEEEecCCeEEEEECCCCeEEEEeecCCC-------
Q 024185 109 MEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKF--SNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPS------- 179 (271)
Q Consensus 109 ~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~--s~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~------- 179 (271)
+.||.|++||+++++. ..+.+|...|.+++| +|++++|++++.|+.|++||+++++.+..+..+..
T Consensus 105 ~~dg~v~iwd~~~~~~-----~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~ 179 (368)
T 3mmy_A 105 SCDKTAKMWDLSSNQA-----IQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVI 179 (368)
T ss_dssp ETTSEEEEEETTTTEE-----EEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEE
T ss_pred cCCCcEEEEEcCCCCc-----eeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEec
Confidence 9999999999998763 335569999999999 89999999999999999999998877666654321
Q ss_pred --------------------------------CCceeeEEECCCCCE----EEEecCCCcEEEEEcCCc---eeEEEecC
Q 024185 180 --------------------------------PNTNTEATFTPDGQY----VVSGSGDGTLHAWNINTR---NEVACWNG 220 (271)
Q Consensus 180 --------------------------------~~~v~~~~~~~~~~~----l~~~~~dg~i~iwd~~~~---~~~~~~~~ 220 (271)
.....++.+.++... +++++.||.|++||++.. +.+..+.+
T Consensus 180 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~ 259 (368)
T 3mmy_A 180 YPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKC 259 (368)
T ss_dssp TTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEEC
T ss_pred CCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeee
Confidence 012334444444333 999999999999999887 56777877
Q ss_pred Ccc------------eeEEEEEecCCcEEEEeC--CeEEEEcCCCCCCCcCCC
Q 024185 221 NIG------------VVACLKWAPRRAMFVAAS--SVLSFWIPNPSSNSTDES 259 (271)
Q Consensus 221 ~~~------------~v~~~~~s~~~~~l~~~~--~~v~iw~~~~~~~~~~~~ 259 (271)
|.. .|.+++|+|++++|++++ |.|++||+++++......
T Consensus 260 ~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 312 (368)
T 3mmy_A 260 HRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSE 312 (368)
T ss_dssp SEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECC
T ss_pred eecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEec
Confidence 776 699999999999999997 889999999887655443
No 100
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-31 Score=238.38 Aligned_cols=200 Identities=14% Similarity=0.058 Sum_probs=170.6
Q ss_pred ccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEec-CCcceEEEcCCCCEEEEEecCCeEEEEeCC
Q 024185 42 ATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILRL-RGRPTVAFDQQGLVFAVAMEAGAIKLFDSR 120 (271)
Q Consensus 42 ~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~ 120 (271)
.+|.+.|.+++|+|++++ ||+|+.||+|++|+..+.+....+.. ..+.+++|+| +++|++++.|+.|++||++
T Consensus 14 ~gh~~~V~~lafspdg~~-----lAsgs~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~ 87 (902)
T 2oaj_A 14 YGMSSKPIAAAFDFTQNL-----LAIATVTGEVHIYGQQQVEVVIKLEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLY 87 (902)
T ss_dssp EECSSCEEEEEEETTTTE-----EEEEETTSEEEEECSTTCEEEEECSSCCCEEEEEEET-TTEEEEEETTCEEEEEETT
T ss_pred cCCCCCcEEEEECCCCCE-----EEEEeCCCEEEEEeCCCcEEEEEcCCCCCEEEEEEcC-CCEEEEEECcCeEEEEECC
Confidence 478899999999999998 89999999999999988776655542 2467799999 8899999999999999999
Q ss_pred CCCCCcceEEEecCCccceEEEEEcCCCcEEEEEecCCeEEEEECCCCeEEE-----------EeecCCCCCceeeEEEC
Q 024185 121 SYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRC-----------GFSLEPSPNTNTEATFT 189 (271)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~~~~~~~-----------~~~~~~~~~~v~~~~~~ 189 (271)
+++. ...+. |...|++++|+|+++++++|+.||.|++||+++++... .+..|. ..|.+++|+
T Consensus 88 ~~~~----~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~--~~V~sl~~s 160 (902)
T 2oaj_A 88 SQKV----LTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARL--SPIVSIQWN 160 (902)
T ss_dssp TCSE----EEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCC--CCCCEEEEE
T ss_pred CCcE----EEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCC--CCeEEEEEc
Confidence 8775 33443 66889999999999999999999999999999887631 122343 459999999
Q ss_pred CC-CCEEEEecCCCcEEEEEcCCceeEEEecCC------------------cceeEEEEEecCCcEEEEeC--CeEEEEc
Q 024185 190 PD-GQYVVSGSGDGTLHAWNINTRNEVACWNGN------------------IGVVACLKWAPRRAMFVAAS--SVLSFWI 248 (271)
Q Consensus 190 ~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~------------------~~~v~~~~~s~~~~~l~~~~--~~v~iw~ 248 (271)
|+ +..+++|+.||.| +||+++++.+..+..| ...|.+++|+|+|++|++++ +.|++||
T Consensus 161 p~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd 239 (902)
T 2oaj_A 161 PRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWD 239 (902)
T ss_dssp TTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEE
T ss_pred cCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEE
Confidence 96 5789999999999 9999999999888765 46799999999999999998 8899999
Q ss_pred CCCCCCC
Q 024185 249 PNPSSNS 255 (271)
Q Consensus 249 ~~~~~~~ 255 (271)
++++++.
T Consensus 240 ~~~g~~~ 246 (902)
T 2oaj_A 240 ANSGHMI 246 (902)
T ss_dssp TTTCCEE
T ss_pred CCCCcEE
Confidence 9887754
No 101
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-31 Score=214.65 Aligned_cols=197 Identities=8% Similarity=-0.023 Sum_probs=163.5
Q ss_pred EEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEecCCcceEEEcCCCCEEEEEecCCeEEEEeCCCCC------CC
Q 024185 52 FLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILRLRGRPTVAFDQQGLVFAVAMEAGAIKLFDSRSYD------KG 125 (271)
Q Consensus 52 ~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~------~~ 125 (271)
.+.+++.. +++|+.||.|++||+++++.+..+....+..+.++|+ +++++.|++|++|+..... ..
T Consensus 43 ~~~~d~~~-----l~sg~~Dg~v~iwd~~~~~~~~~~~~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~ 114 (343)
T 3lrv_A 43 SMYYDKWV-----CMCRCEDGALHFTQLKDSKTITTITTPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTN 114 (343)
T ss_dssp SSSEEEEE-----EEEEEETTEEEEEEESSSSCEEEEEEECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTC
T ss_pred hhcCCCCE-----EEEECCCCcEEEEECCCCcEEEEEecCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCc
Confidence 34456666 8899999999999999999988888667777888888 9999999999999776321 11
Q ss_pred cceEEEecCCccceEEEEEcC--CCcEEEEEecCCeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEecCCCc
Q 024185 126 PFDTFLVGGDTAEVCDIKFSN--DGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGT 203 (271)
Q Consensus 126 ~~~~~~~~~~~~~v~~~~~s~--~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 203 (271)
........+|.+.|.+++|+| +++++++++.|+.|++||+++++.......+.. ..+.+++|+|+++++++|+.||.
T Consensus 115 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~-~~i~~~~~~pdg~~lasg~~dg~ 193 (343)
T 3lrv_A 115 KVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSD-VEYSSGVLHKDSLLLALYSPDGI 193 (343)
T ss_dssp CEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSS-CCCCEEEECTTSCEEEEECTTSC
T ss_pred ceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCC-CceEEEEECCCCCEEEEEcCCCE
Confidence 111222336778999999999 999999999999999999999988665543322 34899999999999999999999
Q ss_pred EEEEEcCCceeE-EEecC-CcceeEEEEEecCCcEEEEeC-CeEEEEcCCCCCCCcC
Q 024185 204 LHAWNINTRNEV-ACWNG-NIGVVACLKWAPRRAMFVAAS-SVLSFWIPNPSSNSTD 257 (271)
Q Consensus 204 i~iwd~~~~~~~-~~~~~-~~~~v~~~~~s~~~~~l~~~~-~~v~iw~~~~~~~~~~ 257 (271)
|++||+++++.+ ..+.. |.++|.+++|+|++.+|++++ +.|++||+++++....
T Consensus 194 i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~~v~iwd~~~~~~~~~ 250 (343)
T 3lrv_A 194 LDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECDQTVVCFDLRKDVGTLA 250 (343)
T ss_dssp EEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEESSBEEEEETTSSTTCBS
T ss_pred EEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeCCeEEEEEcCCCCccee
Confidence 999999999988 78888 999999999999999999998 8899999998876543
No 102
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=5.1e-32 Score=249.91 Aligned_cols=234 Identities=12% Similarity=0.116 Sum_probs=202.0
Q ss_pred ecceeEEeeecceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEE
Q 024185 9 PITQALLFARQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGIL 88 (271)
Q Consensus 9 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 88 (271)
|..+.++++..++.+..++...+ .....+.+|.+.+.+++|+|+++. +++++.||.|++||+.+++....
T Consensus 971 p~g~~l~~g~~~g~i~i~d~~~~----~~~~~~~~h~~~v~~l~~s~dg~~-----l~s~~~dg~i~vwd~~~~~~~~~- 1040 (1249)
T 3sfz_A 971 PHLEYVAFGDEDGAIKIIELPNN----RVFSSGVGHKKAVRHIQFTADGKT-----LISSSEDSVIQVWNWQTGDYVFL- 1040 (1249)
T ss_dssp TTSSEEEEEETTSCCEEEETTTT----SCEEECCCCSSCCCCEEECSSSSC-----EEEECSSSBEEEEETTTTEEECC-
T ss_pred CCCCEEEEEcCCCCEEEEEcCCC----ceeeecccCCCceEEEEECCCCCE-----EEEEcCCCEEEEEECCCCceEEE-
Confidence 44456777788899999988776 334557899999999999999998 88999999999999999876643
Q ss_pred ecC--CcceEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEecCCeEEEEECC
Q 024185 89 RLR--GRPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAY 166 (271)
Q Consensus 89 ~~~--~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~ 166 (271)
..+ .+.+++|+|++. +++++.||.|++||+.+++. ...+.+|.+.|.+++|+|+++++++++.|+.|++||+.
T Consensus 1041 ~~~~~~v~~~~~~~~~~-l~~~~~dg~v~vwd~~~~~~----~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~ 1115 (1249)
T 3sfz_A 1041 QAHQETVKDFRLLQDSR-LLSWSFDGTVKVWNVITGRI----ERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFD 1115 (1249)
T ss_dssp BCCSSCEEEEEECSSSE-EEEEESSSEEEEEETTTTCC----CEEEECCSSCCCCEEECSSSSSCEEECCSSCCCEECSS
T ss_pred ecCCCcEEEEEEcCCCc-EEEEECCCcEEEEECCCCce----eEEEcccCCcEEEEEECCCCCEEEEEcCCCcEEEEECC
Confidence 333 356699999664 78888999999999999886 56677899999999999999999999999999999999
Q ss_pred CCeEEEEeecCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCCceeEEEe---------cCCcceeEEEEEecCCcEE
Q 024185 167 GGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACW---------NGNIGVVACLKWAPRRAMF 237 (271)
Q Consensus 167 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~---------~~~~~~v~~~~~s~~~~~l 237 (271)
+++.+..+..|... |.+++|+|+|+++++++.||.|++||+.+++.+..+ .+|.+.|++++|+|||+++
T Consensus 1116 ~~~~~~~l~~h~~~--v~~~~~s~dg~~lat~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~l 1193 (1249)
T 3sfz_A 1116 LLSPLHELKGHNGC--VRCSAFSLDGILLATGDDNGEIRIWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTL 1193 (1249)
T ss_dssp SSSCSBCCCCCSSC--EEEEEECSSSSEEEEEETTSCCCEEESSSSCCCCCCCCCC-------CCSCCCEEEECTTSSCE
T ss_pred CcceeeeeccCCCc--EEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEeccccccccccccCceEEEEEECCCCCEE
Confidence 99988888877765 999999999999999999999999999998877655 6788999999999999999
Q ss_pred EEeCCeEEEEcCCCCCCCcCCC
Q 024185 238 VAASSVLSFWIPNPSSNSTDES 259 (271)
Q Consensus 238 ~~~~~~v~iw~~~~~~~~~~~~ 259 (271)
++++|.+++||+.+++......
T Consensus 1194 ~s~~g~v~vwd~~~g~~~~~~~ 1215 (1249)
T 3sfz_A 1194 VSAGGYLKWWNVATGDSSQTFY 1215 (1249)
T ss_dssp EEESSSEEEBCSSSCBCCCCCC
T ss_pred EECCCeEEEEECCCCceeeeee
Confidence 9999999999999988765553
No 103
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=5.6e-30 Score=227.00 Aligned_cols=232 Identities=15% Similarity=0.164 Sum_probs=200.4
Q ss_pred eecceeEEeeecceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCc-ceeE
Q 024185 8 LPITQALLFARQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLA-SFQG 86 (271)
Q Consensus 8 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~-~~~~ 86 (271)
.|..+.++.+..++.+..++...+ .....+.+|.+.+.+++|+|+++. +++++.||.|++||++++ ....
T Consensus 64 s~~~~~l~~~~~dg~i~vw~~~~~----~~~~~~~~~~~~v~~~~~s~~~~~-----l~~~~~dg~i~vw~~~~~~~~~~ 134 (814)
T 3mkq_A 64 IARKNWIIVGSDDFRIRVFNYNTG----EKVVDFEAHPDYIRSIAVHPTKPY-----VLSGSDDLTVKLWNWENNWALEQ 134 (814)
T ss_dssp EGGGTEEEEEETTSEEEEEETTTC----CEEEEEECCSSCEEEEEECSSSSE-----EEEEETTSEEEEEEGGGTSEEEE
T ss_pred eCCCCEEEEEeCCCeEEEEECCCC----cEEEEEecCCCCEEEEEEeCCCCE-----EEEEcCCCEEEEEECCCCceEEE
Confidence 355566777888999999998777 444557889999999999999998 889999999999999887 5667
Q ss_pred EEecCC--cceEEEcC-CCCEEEEEecCCeEEEEeCCCCCCCcceEEEec-CCccceEEEEEcC--CCcEEEEEecCCeE
Q 024185 87 ILRLRG--RPTVAFDQ-QGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVG-GDTAEVCDIKFSN--DGKSMLLTTTNNNI 160 (271)
Q Consensus 87 ~~~~~~--~~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~-~~~~~v~~~~~s~--~~~~l~~~~~d~~i 160 (271)
.+..|. +.+++|+| +++.+++++.||.|++||+.+++. ...+. .+...+.+++|+| ++.++++++.||.|
T Consensus 135 ~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i 210 (814)
T 3mkq_A 135 TFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTP----NFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTI 210 (814)
T ss_dssp EEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSC----SEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEE
T ss_pred EEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcc----eeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEE
Confidence 777664 66799999 889999999999999999987765 33333 3448899999999 99999999999999
Q ss_pred EEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCCceeEEEecCCcceeEEEEEecCCc--EEE
Q 024185 161 YVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRA--MFV 238 (271)
Q Consensus 161 ~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~--~l~ 238 (271)
++||+++++.+..+..|... +.+++|+|+++++++++.||.|++||+.+++.+..+..|...+.+++|+|++. +++
T Consensus 211 ~~~d~~~~~~~~~~~~~~~~--v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 288 (814)
T 3mkq_A 211 KIWDYQTKSCVATLEGHMSN--VSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIA 288 (814)
T ss_dssp EEEETTTTEEEEEEECCSSC--EEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGGEEE
T ss_pred EEEECCCCcEEEEEcCCCCC--EEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCceEEE
Confidence 99999999999998887765 99999999999999999999999999999999999999999999999999987 566
Q ss_pred EeC-CeEEEEcCCCCCC
Q 024185 239 AAS-SVLSFWIPNPSSN 254 (271)
Q Consensus 239 ~~~-~~v~iw~~~~~~~ 254 (271)
+++ +.+.+|++.....
T Consensus 289 ~~~~~~~~~~~~~~~~~ 305 (814)
T 3mkq_A 289 SGFDNGFTVLSLGNDEP 305 (814)
T ss_dssp EEETTEEEEEECSCCSC
T ss_pred EEeCCCEEEEEcCCCCc
Confidence 666 8899999876543
No 104
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.2e-31 Score=212.71 Aligned_cols=221 Identities=10% Similarity=0.016 Sum_probs=170.3
Q ss_pred eeEEeeecceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEec---------Cc
Q 024185 12 QALLFARQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLM---------LA 82 (271)
Q Consensus 12 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~---------~~ 82 (271)
..++.+..++.+..++...+..... +. ...+..+.++|. +++++.|+++++|+.+ ++
T Consensus 49 ~~l~sg~~Dg~v~iwd~~~~~~~~~----~~--~~~v~~~~~~~~--------~~s~s~D~~i~~w~~~~~~~~~~~~~~ 114 (343)
T 3lrv_A 49 WVCMCRCEDGALHFTQLKDSKTITT----IT--TPNPRTGGEHPA--------IISRGPCNRLLLLYPGNQITILDSKTN 114 (343)
T ss_dssp EEEEEEEETTEEEEEEESSSSCEEE----EE--EECCCTTCCCCS--------EEEECSTTEEEEEETTTEEEEEETTTC
T ss_pred CEEEEECCCCcEEEEECCCCcEEEE----Ee--cCCceeeeeCCc--------eEEecCCCeEEEEEccCceEEeecCCc
Confidence 3455567799999999877632222 22 456667778887 4589999999999765 44
Q ss_pred ceeEEEe-cC--CcceEEEcC--CCCEEEEEecCCeEEEEeCCCCCCCcceEEEe-cCCccceEEEEEcCCCcEEEEEec
Q 024185 83 SFQGILR-LR--GRPTVAFDQ--QGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLV-GGDTAEVCDIKFSNDGKSMLLTTT 156 (271)
Q Consensus 83 ~~~~~~~-~~--~~~~~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~ 156 (271)
+.++.+. .| .+.+++|+| +++++++++.||.|++||+++++. .... ..|...+.+++|+|++.+|++|+.
T Consensus 115 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~----~~~~~~~~~~~i~~~~~~pdg~~lasg~~ 190 (343)
T 3lrv_A 115 KVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQ----YIVHSAKSDVEYSSGVLHKDSLLLALYSP 190 (343)
T ss_dssp CEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCE----EEEECCCSSCCCCEEEECTTSCEEEEECT
T ss_pred ceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcE----EEEEecCCCCceEEEEECCCCCEEEEEcC
Confidence 4444444 33 367799999 999999999999999999998774 2222 345668999999999999999999
Q ss_pred CCeEEEEECCCCeEE-EEeec-CCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCCceeEEEecC---CcceeE--EEE
Q 024185 157 NNNIYVLDAYGGEKR-CGFSL-EPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNG---NIGVVA--CLK 229 (271)
Q Consensus 157 d~~i~~~d~~~~~~~-~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~---~~~~v~--~~~ 229 (271)
||.|++||+++++.+ ..+.. |... |.+++|+|++++|++++ ++.|++||+++++.+..+.. |...+. +++
T Consensus 191 dg~i~iwd~~~~~~~~~~~~~~h~~~--v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (343)
T 3lrv_A 191 DGILDVYNLSSPDQASSRFPVDEEAK--IKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYD 267 (343)
T ss_dssp TSCEEEEESSCTTSCCEECCCCTTSC--EEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEE
T ss_pred CCEEEEEECCCCCCCccEEeccCCCC--EEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEE
Confidence 999999999999877 77776 6654 99999999999999999 45999999999877655443 444444 699
Q ss_pred EecCCcEEEE--e-CCeEEEEcCCCCC
Q 024185 230 WAPRRAMFVA--A-SSVLSFWIPNPSS 253 (271)
Q Consensus 230 ~s~~~~~l~~--~-~~~v~iw~~~~~~ 253 (271)
|+|+|++|++ + ++.+++|++++..
T Consensus 268 ~~~~g~~l~~~s~~d~~i~v~~~~~~~ 294 (343)
T 3lrv_A 268 IDDSGKNMIAYSNESNSLTIYKFDKKT 294 (343)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEECTTT
T ss_pred ECCCCCEEEEecCCCCcEEEEEEcccc
Confidence 9999999999 4 3789999996654
No 105
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=1.3e-30 Score=215.72 Aligned_cols=224 Identities=13% Similarity=0.163 Sum_probs=182.3
Q ss_pred eeEEeeecceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCccee---EEE
Q 024185 12 QALLFARQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQ---GIL 88 (271)
Q Consensus 12 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~---~~~ 88 (271)
+.++.+..++.+..++...+ .....+.+|...+.++.++++ . +++++.||.|++||+++++.. ..+
T Consensus 184 ~~l~sg~~dg~i~vwd~~~~----~~~~~~~~h~~~v~~l~~~~~--~-----l~s~s~dg~i~vwd~~~~~~~~~~~~~ 252 (435)
T 1p22_A 184 RVIITGSSDSTVRVWDVNTG----EMLNTLIHHCEAVLHLRFNNG--M-----MVTCSKDRSIAVWDMASPTDITLRRVL 252 (435)
T ss_dssp SEEEEEETTSCEEEEESSSC----CEEEEECCCCSCEEEEECCTT--E-----EEEEETTSCEEEEECSSSSCCEEEEEE
T ss_pred CEEEEEcCCCeEEEEECCCC----cEEEEEcCCCCcEEEEEEcCC--E-----EEEeeCCCcEEEEeCCCCCCceeeeEe
Confidence 45556677899999998777 445668899999999999753 4 789999999999999987755 556
Q ss_pred ecCCcceEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEecCCeEEEEECCCC
Q 024185 89 RLRGRPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGG 168 (271)
Q Consensus 89 ~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~~~ 168 (271)
.+|...+.++..+++++++++.||.|++||+++++. ...+.+|...+.+++|+ ++++++++.||.|++||++++
T Consensus 253 ~~~~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~----~~~~~~~~~~v~~~~~~--~~~l~~g~~dg~i~iwd~~~~ 326 (435)
T 1p22_A 253 VGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEF----VRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECG 326 (435)
T ss_dssp CCCSSCEEEEEEETTEEEEEETTSEEEEEETTTCCE----EEEEECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTC
T ss_pred cCCCCcEEEEEeCCCEEEEEeCCCeEEEEECCcCcE----EEEEcCCCCcEEEEEeC--CCEEEEEeCCCeEEEEECCCC
Confidence 666544433333889999999999999999998875 66677899999999994 679999999999999999999
Q ss_pred eEEEEeecCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCCce---------eEEEecCCcceeEEEEEecCCcEEEE
Q 024185 169 EKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRN---------EVACWNGNIGVVACLKWAPRRAMFVA 239 (271)
Q Consensus 169 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~---------~~~~~~~~~~~v~~~~~s~~~~~l~~ 239 (271)
+.+..+..|... +.+++| +++++++|+.||.|++||+.+++ .+..+.+|.+.|.+++| ++.+|++
T Consensus 327 ~~~~~~~~h~~~--v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s 400 (435)
T 1p22_A 327 ACLRVLEGHEEL--VRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVS 400 (435)
T ss_dssp CEEEEECCCSSC--EEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEE
T ss_pred CEEEEEeCCcCc--EEEEEe--cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEE
Confidence 999999887766 888888 78899999999999999998776 78889999999999999 7888999
Q ss_pred eC--CeEEEEcCCCCCCCcCC
Q 024185 240 AS--SVLSFWIPNPSSNSTDE 258 (271)
Q Consensus 240 ~~--~~v~iw~~~~~~~~~~~ 258 (271)
++ |.|++||+.+.......
T Consensus 401 ~s~Dg~i~iwd~~~~~~~~~~ 421 (435)
T 1p22_A 401 SSHDDTILIWDFLNDPAAQAE 421 (435)
T ss_dssp CCSSSEEEEEC----------
T ss_pred EeCCCEEEEEECCCCCCcccC
Confidence 88 88999999887654433
No 106
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=1e-30 Score=210.72 Aligned_cols=201 Identities=14% Similarity=0.100 Sum_probs=161.2
Q ss_pred EcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEecCCcceEEEcCCCCEEE-EEecCCeEEEEe
Q 024185 40 FFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILRLRGRPTVAFDQQGLVFA-VAMEAGAIKLFD 118 (271)
Q Consensus 40 ~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~d~~i~i~d 118 (271)
.+..|.+.|.+++|+|++++ |++|+.++ +++||.++++.......+++..+++.++++.++ +++.|+.|++||
T Consensus 14 ~~~~h~~~V~~v~fs~dg~~-----la~g~~~~-~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd 87 (355)
T 3vu4_A 14 PENHVSNPVTDYEFNQDQSC-----LILSTLKS-FEIYNVHPVAHIMSQEMRHLSKVRMLHRTNYVAFVTGVKEVVHIWD 87 (355)
T ss_dssp -----CCCCCEEEECTTSSE-----EEEECSSE-EEEEEETTEEEEEEEECSCCCEEEECTTSSEEEEECSSTTEEEEEE
T ss_pred ccccCCCceEEEEECCCCCE-----EEEEcCCE-EEEEecCCcceeeeeecCCeEEEEEcCCCCEEEEEECCccEEEEEE
Confidence 35788999999999999998 77777765 789999988877666666777899999988774 567788999999
Q ss_pred CCCCCCCcceEEEecCCccceEEEEEcCCC-----------------------------------cEEEE--EecCCeEE
Q 024185 119 SRSYDKGPFDTFLVGGDTAEVCDIKFSNDG-----------------------------------KSMLL--TTTNNNIY 161 (271)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-----------------------------------~~l~~--~~~d~~i~ 161 (271)
..+++. ...+. +...|.+++|+++. .++++ |+.||.|+
T Consensus 88 ~~~~~~----~~~~~-~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g~v~ 162 (355)
T 3vu4_A 88 DVKKQD----VSRIK-VDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQIH 162 (355)
T ss_dssp TTTTEE----EEEEE-CSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTTCEE
T ss_pred CCCCcE----EEEEE-CCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCcEEE
Confidence 998775 33343 55678888887653 23444 46788899
Q ss_pred EEECCCCe----------------EEEEeecCCCCCceeeEEECCCCCEEEEecCCCc-EEEEEcCCceeEEEec-C-Cc
Q 024185 162 VLDAYGGE----------------KRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGT-LHAWNINTRNEVACWN-G-NI 222 (271)
Q Consensus 162 ~~d~~~~~----------------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~-i~iwd~~~~~~~~~~~-~-~~ 222 (271)
+||+++++ .+..+..|... |.+++|+|+|++|++|+.|++ |++||+++++.+..+. + |.
T Consensus 163 iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~--v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~ 240 (355)
T 3vu4_A 163 ITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNP--IKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDR 240 (355)
T ss_dssp EEECCC------------------CCEEECCCSSC--EEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCC
T ss_pred EEECCCCCccccccccccccccCcccEEEEccCCc--eEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCC
Confidence 99988765 15667777765 999999999999999999998 9999999999999998 5 99
Q ss_pred ceeEEEEEecCCcEEEEeC--CeEEEEcCCCCC
Q 024185 223 GVVACLKWAPRRAMFVAAS--SVLSFWIPNPSS 253 (271)
Q Consensus 223 ~~v~~~~~s~~~~~l~~~~--~~v~iw~~~~~~ 253 (271)
..|.+++|+|++++|++++ +.|++||++...
T Consensus 241 ~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~ 273 (355)
T 3vu4_A 241 ADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQ 273 (355)
T ss_dssp SCEEEEEECTTSCEEEEEETTCEEEEEESSCCS
T ss_pred CcEEEEEECCCCCEEEEEECCCEEEEEEccCCC
Confidence 9999999999999999998 889999998754
No 107
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.98 E-value=2.7e-30 Score=211.33 Aligned_cols=206 Identities=12% Similarity=0.117 Sum_probs=175.0
Q ss_pred EEcccccceEEeeEEec-CCchhhhhhhhhhccCceEEEEEecCcceeEEEe-------------cC--CcceEEEcC-C
Q 024185 39 EFFATSKGIRRGLFLSA-CLQLMIALCLVLLTTALEYGIFVLMLASFQGILR-------------LR--GRPTVAFDQ-Q 101 (271)
Q Consensus 39 ~~~~~~~~~v~~~~~s~-~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-------------~~--~~~~~~~~~-~ 101 (271)
..+.+|.+.|.+++|+| ++++ +++++.||.|++||+++++....+. +| .+.+++|+| +
T Consensus 37 ~~~~~h~~~v~~~~~s~~~~~~-----l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 111 (408)
T 4a11_B 37 DVERIHGGGINTLDIEPVEGRY-----MLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHD 111 (408)
T ss_dssp EECCCCSSCEEEEEECTTTCCE-----EEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTC
T ss_pred eeeeccCCcEEEEEEecCCCCE-----EEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCC
Confidence 45788999999999999 9998 8899999999999999876554442 23 467799999 7
Q ss_pred CCEEEEEecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCC---CcEEEEEecCCeEEEEECCCCeEEEEeecCC
Q 024185 102 GLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSND---GKSMLLTTTNNNIYVLDAYGGEKRCGFSLEP 178 (271)
Q Consensus 102 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~---~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~ 178 (271)
+++|++++.||.|++||+.+++. ...+ .+...+.++.|+|. +.++++++.|+.|++||+++++.+..+..|.
T Consensus 112 ~~~l~s~~~d~~i~iwd~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~ 186 (408)
T 4a11_B 112 TGMFTSSSFDKTLKVWDTNTLQT----ADVF-NFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHR 186 (408)
T ss_dssp TTCEEEEETTSEEEEEETTTTEE----EEEE-ECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCC
T ss_pred CcEEEEEeCCCeEEEeeCCCCcc----ceec-cCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCC
Confidence 78999999999999999998764 3333 26678999999994 4599999999999999999999888888777
Q ss_pred CCCceeeEEECCCCC-EEEEecCCCcEEEEEcCCce-eEEEe---------------cCCcceeEEEEEecCCcEEEEeC
Q 024185 179 SPNTNTEATFTPDGQ-YVVSGSGDGTLHAWNINTRN-EVACW---------------NGNIGVVACLKWAPRRAMFVAAS 241 (271)
Q Consensus 179 ~~~~v~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~-~~~~~---------------~~~~~~v~~~~~s~~~~~l~~~~ 241 (271)
.. +.+++|+|+++ .+++++.||.|++||++++. .+..+ .+|...|.+++|+|++++|++++
T Consensus 187 ~~--v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 264 (408)
T 4a11_B 187 QE--ILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVG 264 (408)
T ss_dssp SC--EEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEE
T ss_pred Cc--EEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEec
Confidence 65 99999999998 58899999999999998765 44444 56888999999999999999997
Q ss_pred --CeEEEEcCCCCCCCc
Q 024185 242 --SVLSFWIPNPSSNST 256 (271)
Q Consensus 242 --~~v~iw~~~~~~~~~ 256 (271)
+.+++||+.+++...
T Consensus 265 ~dg~i~vwd~~~~~~~~ 281 (408)
T 4a11_B 265 TDNRMRLWNSSNGENTL 281 (408)
T ss_dssp TTSCEEEEETTTCCBCC
T ss_pred CCCeEEEEECCCCccce
Confidence 889999999876543
No 108
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.98 E-value=2.4e-30 Score=222.38 Aligned_cols=225 Identities=14% Similarity=0.109 Sum_probs=178.7
Q ss_pred ecceeEEeeecceeeEEEEeeccceeeEEEEEcccccceEEeeEEecC--------------------------------
Q 024185 9 PITQALLFARQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSAC-------------------------------- 56 (271)
Q Consensus 9 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-------------------------------- 56 (271)
|....++.+..++.+..++...+ ..+..+.+|.+.+.++.+ |+
T Consensus 307 ~~~~~l~~~~~~g~i~~~d~~~~----~~~~~~~~~~~~v~~~~~-~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~ 381 (615)
T 1pgu_A 307 TGNGRIISLSLDGTLNFYELGHD----EVLKTISGHNKGITALTV-NPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNS 381 (615)
T ss_dssp EETTEEEEEETTSCEEEEETTEE----EEEEEECCCSSCEEEEET-TTTEEEETTSCEEETTTTEEECCCCSCEEEEECC
T ss_pred CCCCeEEEEECCCCEEEEECCCC----cEEEEEeCCCCCEEEEEe-cCcEEECCCCeEEEEEchhhcCcccCceEEEEEC
Confidence 45566777777888888886554 333345555554444444 32
Q ss_pred -CchhhhhhhhhhccCceEEEEEecC----------------------------------cceeEEEec-CCcceEEEcC
Q 024185 57 -LQLMIALCLVLLTTALEYGIFVLML----------------------------------ASFQGILRL-RGRPTVAFDQ 100 (271)
Q Consensus 57 -~~~~~~~~l~s~~~dg~i~iwd~~~----------------------------------~~~~~~~~~-~~~~~~~~~~ 100 (271)
+.. +++++.|+.+++||+.+ ++.+..+.. ..+.+++|+
T Consensus 382 ~~~~-----l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 455 (615)
T 1pgu_A 382 KAQE-----YSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLS- 455 (615)
T ss_dssp STTC-----CEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEEC-
T ss_pred CCcE-----EEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEc-
Confidence 444 67888888888888753 233333332 235567887
Q ss_pred CCCEEEEEec-CCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEecCCeEEEEECCCCeEEEEeec-CC
Q 024185 101 QGLVFAVAME-AGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSL-EP 178 (271)
Q Consensus 101 ~~~~l~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~-~~ 178 (271)
++++++++. |+.|++||+.+++. . ...+.+|...|.+++|+|++++|++++.|+.|++||+.+++.+..+.. |.
T Consensus 456 -~~~l~~~~~~d~~i~~~~~~~~~~--~-~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~ 531 (615)
T 1pgu_A 456 -QNYVAVGLEEGNTIQVFKLSDLEV--S-FDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRT 531 (615)
T ss_dssp -SSEEEEEETTTSCEEEEETTEEEE--E-EECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCS
T ss_pred -CCEEEEeecCCCeEEEEECCCccc--c-ccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCC
Confidence 889999999 99999999987653 1 156778999999999999999999999999999999999999888776 66
Q ss_pred CCCceeeEEECC----------CCCEEEEecCCCcEEEEEcCCc-eeEEEecCCcceeEEEEEecCCcEEEEeC--CeEE
Q 024185 179 SPNTNTEATFTP----------DGQYVVSGSGDGTLHAWNINTR-NEVACWNGNIGVVACLKWAPRRAMFVAAS--SVLS 245 (271)
Q Consensus 179 ~~~~v~~~~~~~----------~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~~v~ 245 (271)
.. +.+++|+| ++++|++++.||.|++||+.++ +.+..+.+|...|.+++|+|+++ |++++ +.|+
T Consensus 532 ~~--v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~~~-l~s~~~d~~v~ 608 (615)
T 1pgu_A 532 SK--INAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADACIK 608 (615)
T ss_dssp SC--EEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETTE-EEEEETTSCEE
T ss_pred Cc--eeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhhhcCccceEEEEEcCCCC-eEEecCCceEE
Confidence 55 99999999 9999999999999999999998 78889999999999999999999 88887 8899
Q ss_pred EEcCCC
Q 024185 246 FWIPNP 251 (271)
Q Consensus 246 iw~~~~ 251 (271)
+|++++
T Consensus 609 iw~~~~ 614 (615)
T 1pgu_A 609 RWNVVL 614 (615)
T ss_dssp EEEEC-
T ss_pred EEeeec
Confidence 999875
No 109
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.98 E-value=8.6e-30 Score=211.30 Aligned_cols=225 Identities=13% Similarity=0.164 Sum_probs=192.7
Q ss_pred ceeEEeeecceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEec
Q 024185 11 TQALLFARQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILRL 90 (271)
Q Consensus 11 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 90 (271)
.+.++.+..++.+..++...+ .....+.+|.+.+.++.++ ++. +++++.||+|++||+++++.+..+.+
T Consensus 129 g~~l~sg~~dg~i~vwd~~~~----~~~~~~~~h~~~v~~~~~~--~~~-----l~s~~~dg~i~vwd~~~~~~~~~~~~ 197 (445)
T 2ovr_B 129 GNRIVSGSDDNTLKVWSAVTG----KCLRTLVGHTGGVWSSQMR--DNI-----IISGSTDRTLKVWNAETGECIHTLYG 197 (445)
T ss_dssp TTEEEEEETTSCEEEEETTTC----CEEEECCCCSSCEEEEEEE--TTE-----EEEEETTSCEEEEETTTTEEEEEECC
T ss_pred CCEEEEEECCCcEEEEECCCC----cEEEEEcCCCCCEEEEEec--CCE-----EEEEeCCCeEEEEECCcCcEEEEECC
Confidence 455666778999999998777 4556688999999999998 345 78999999999999999999999988
Q ss_pred CCcceEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEecCCeEEEEECCCCeE
Q 024185 91 RGRPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEK 170 (271)
Q Consensus 91 ~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~~~~~ 170 (271)
|.....++..+++.+++++.||.|++||+.+++. ...+.+|...+.+++| +++++++++.|+.|++||+++++.
T Consensus 198 h~~~v~~~~~~~~~l~s~s~dg~i~~wd~~~~~~----~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~ 271 (445)
T 2ovr_B 198 HTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQC----LHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETC 271 (445)
T ss_dssp CSSCEEEEEEETTEEEEEETTSEEEEEESSSCCE----EEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEE
T ss_pred CCCcEEEEEecCCEEEEEeCCCEEEEEECCCCcE----EEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcE
Confidence 8644433333577899999999999999998875 6667789999999999 788999999999999999999999
Q ss_pred EEEeecCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCCceeEEEecCCcceeEEEEEecCCcEEEEeC--CeEEEEc
Q 024185 171 RCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWI 248 (271)
Q Consensus 171 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~~v~iw~ 248 (271)
+..+..|... +.+++| +++++++++.||.|++||+++++.+..+.+|...+.++.++ ++++++++ |.|++||
T Consensus 272 ~~~~~~~~~~--v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~vwd 345 (445)
T 2ovr_B 272 LHTLQGHTNR--VYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGNADSTVKIWD 345 (445)
T ss_dssp EEEECCCSSC--EEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEE--TTEEEEEETTSCEEEEE
T ss_pred eEEecCCCCc--eEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEe--CCEEEEEeCCCeEEEEE
Confidence 9999877765 888888 88999999999999999999999999999999999888775 66888887 8899999
Q ss_pred CCCCCCCcCC
Q 024185 249 PNPSSNSTDE 258 (271)
Q Consensus 249 ~~~~~~~~~~ 258 (271)
+++++.....
T Consensus 346 ~~~~~~~~~~ 355 (445)
T 2ovr_B 346 IKTGQCLQTL 355 (445)
T ss_dssp TTTCCEEEEE
T ss_pred CCCCcEEEEE
Confidence 9888765444
No 110
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.98 E-value=1.4e-30 Score=215.11 Aligned_cols=206 Identities=14% Similarity=0.187 Sum_probs=173.7
Q ss_pred EEcccccceEEeeEEecC-CchhhhhhhhhhccCceEEEEEecC----------cceeEEEecCC--cceEEEcCCCC-E
Q 024185 39 EFFATSKGIRRGLFLSAC-LQLMIALCLVLLTTALEYGIFVLML----------ASFQGILRLRG--RPTVAFDQQGL-V 104 (271)
Q Consensus 39 ~~~~~~~~~v~~~~~s~~-~~~~~~~~l~s~~~dg~i~iwd~~~----------~~~~~~~~~~~--~~~~~~~~~~~-~ 104 (271)
.....|.+.+.+++++|+ +.+ +++++.||.|++||+.+ .+....+.+|. +.+++|+|+++ +
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~-----lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~ 196 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACV-----IATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGY 196 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEE-----EEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTE
T ss_pred EEEEcCCCcEEEEEECCCCCcE-----EEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCe
Confidence 345578899999999998 455 78999999999999987 56677777775 56799999998 9
Q ss_pred EEEEecCCeEEEEeCCCCCCCcc---eEEEecCCccceEEEEEcC-CCcEEEEEecCCeEEEEECCCC---eEEEEeecC
Q 024185 105 FAVAMEAGAIKLFDSRSYDKGPF---DTFLVGGDTAEVCDIKFSN-DGKSMLLTTTNNNIYVLDAYGG---EKRCGFSLE 177 (271)
Q Consensus 105 l~~~~~d~~i~i~d~~~~~~~~~---~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~d~~i~~~d~~~~---~~~~~~~~~ 177 (271)
|++++.||.|++||+........ ....+.+|...|.+++|+| ++..|++++.|+.|++||++++ +....+..|
T Consensus 197 l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~ 276 (430)
T 2xyi_A 197 LLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAH 276 (430)
T ss_dssp EEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECC
T ss_pred EEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecC
Confidence 99999999999999987432111 1344668999999999999 7788999999999999999987 566667666
Q ss_pred CCCCceeeEEECCCCC-EEEEecCCCcEEEEEcCC-ceeEEEecCCcceeEEEEEecCCc-EEEEeC--CeEEEEcCCC
Q 024185 178 PSPNTNTEATFTPDGQ-YVVSGSGDGTLHAWNINT-RNEVACWNGNIGVVACLKWAPRRA-MFVAAS--SVLSFWIPNP 251 (271)
Q Consensus 178 ~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~--~~v~iw~~~~ 251 (271)
... +.+++|+|+++ ++++|+.||.|++||+++ +.++..+..|...|.+++|+|+++ +|++++ +.|++||+..
T Consensus 277 ~~~--v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~ 353 (430)
T 2xyi_A 277 TAE--VNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 353 (430)
T ss_dssp SSC--EEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGG
T ss_pred CCC--eEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCC
Confidence 655 99999999987 688999999999999998 567888999999999999999985 577776 8899999987
No 111
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.97 E-value=5.9e-29 Score=206.28 Aligned_cols=222 Identities=12% Similarity=0.139 Sum_probs=186.8
Q ss_pred eeEEeeecceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEecC
Q 024185 12 QALLFARQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILRLR 91 (271)
Q Consensus 12 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 91 (271)
+.++.+..++.+..++...+ .....+.+|...+.++.+ ++.. +++++.||.|++||+++++.+..+.+|
T Consensus 210 ~~l~s~s~dg~i~~wd~~~~----~~~~~~~~~~~~v~~~~~--~~~~-----l~~~~~dg~i~iwd~~~~~~~~~~~~~ 278 (445)
T 2ovr_B 210 KRVVSGSRDATLRVWDIETG----QCLHVLMGHVAAVRCVQY--DGRR-----VVSGAYDFMVKVWDPETETCLHTLQGH 278 (445)
T ss_dssp TEEEEEETTSEEEEEESSSC----CEEEEEECCSSCEEEEEE--CSSC-----EEEEETTSCEEEEEGGGTEEEEEECCC
T ss_pred CEEEEEeCCCEEEEEECCCC----cEEEEEcCCcccEEEEEE--CCCE-----EEEEcCCCEEEEEECCCCcEeEEecCC
Confidence 45666677899999988766 444557889999998888 6666 889999999999999999999999887
Q ss_pred CcceEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEecCCeEEEEECCCCeEE
Q 024185 92 GRPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKR 171 (271)
Q Consensus 92 ~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~~~~~~ 171 (271)
.....++..+++++++++.||.|++||+++++. ...+.+|...+.++.++ ++++++++.||.|++||+++++.+
T Consensus 279 ~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~----~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~vwd~~~~~~~ 352 (445)
T 2ovr_B 279 TNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNC----IHTLTGHQSLTSGMELK--DNILVSGNADSTVKIWDIKTGQCL 352 (445)
T ss_dssp SSCEEEEEECSSEEEEEETTSCEEEEETTTCCE----EEEECCCCSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEE
T ss_pred CCceEEEEECCCEEEEEeCCCeEEEEECCCCCE----EEEEcCCcccEEEEEEe--CCEEEEEeCCCeEEEEECCCCcEE
Confidence 644433333899999999999999999998875 66778899999988875 569999999999999999999999
Q ss_pred EEeecCC-CCCceeeEEECCCCCEEEEecCCCcEEEEEcCCceeEEEe-----cCCcceeEEEEEecCCcEEEEeC--Ce
Q 024185 172 CGFSLEP-SPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACW-----NGNIGVVACLKWAPRRAMFVAAS--SV 243 (271)
Q Consensus 172 ~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-----~~~~~~v~~~~~s~~~~~l~~~~--~~ 243 (271)
..+..+. +...+.+++|+ ++++++|+.||.|++||+.+++.+..+ .+|.+.|.+++|+|++.++++++ |+
T Consensus 353 ~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~ 430 (445)
T 2ovr_B 353 QTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGT 430 (445)
T ss_dssp EEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSS
T ss_pred EEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCC
Confidence 8887632 22459889985 579999999999999999999998888 46788999999999999999997 65
Q ss_pred ----EEEEcCCCC
Q 024185 244 ----LSFWIPNPS 252 (271)
Q Consensus 244 ----v~iw~~~~~ 252 (271)
+.+||++..
T Consensus 431 ~~~~l~v~df~~~ 443 (445)
T 2ovr_B 431 EETKLLVLDFDVD 443 (445)
T ss_dssp SCCEEEEEECCCC
T ss_pred CccEEEEEECCCC
Confidence 999998764
No 112
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=8.4e-30 Score=211.06 Aligned_cols=192 Identities=12% Similarity=0.134 Sum_probs=158.7
Q ss_pred cccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEecCC-------cceEEEcCCCCEEEEEecCCeEE
Q 024185 43 TSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILRLRG-------RPTVAFDQQGLVFAVAMEAGAIK 115 (271)
Q Consensus 43 ~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-------~~~~~~~~~~~~l~~~~~d~~i~ 115 (271)
.|...|.+++|||+|+. +|+++.||.+++||.++ .+..+. |. +.+++|||||++|++|+.||+|+
T Consensus 83 ~~~~~V~~vawSPdG~~-----LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVk 154 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDW-----MAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQ 154 (588)
T ss_dssp SCSCCEEEEEECSSSSC-----EEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEE
T ss_pred CCCCcEEEEEECCCCCE-----EEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEE
Confidence 44778999999999999 89999999999999544 555555 43 66799999999999999999999
Q ss_pred EEeCCCCCCCc---ceEEEe----cCCccceEEEEEcCCCcEEEEEecCCeEEEEECCCCeE---EEEee-cCCCCCcee
Q 024185 116 LFDSRSYDKGP---FDTFLV----GGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEK---RCGFS-LEPSPNTNT 184 (271)
Q Consensus 116 i~d~~~~~~~~---~~~~~~----~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~~~~~---~~~~~-~~~~~~~v~ 184 (271)
+||+.++.... .....+ .+|...|.+++|+||| +++++.|+.+++||+.+++. .+++. .|.. .|.
T Consensus 155 IWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~--~V~ 230 (588)
T 2j04_A 155 FFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRR--KIT 230 (588)
T ss_dssp EEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSS--CCC
T ss_pred EEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccC--cEE
Confidence 99998865211 123443 6788899999999999 88889999999999988773 34553 4544 499
Q ss_pred eEEECCCCCEEEEecCCCcEEEEEcCCceeEEEecCCcceeEEEEE--ecCCcEEEEeC--CeEEEEcCC
Q 024185 185 EATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKW--APRRAMFVAAS--SVLSFWIPN 250 (271)
Q Consensus 185 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--s~~~~~l~~~~--~~v~iw~~~ 250 (271)
+++|+ |+.+++++ ++.|++||+.+++......+|.+.|..++| +||+..+++++ |+ ++|..+
T Consensus 231 svaFs--g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 231 DLKIV--DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLED 296 (588)
T ss_dssp CEEEE--TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS
T ss_pred EEEEE--CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec
Confidence 99999 68899887 699999999988874444489999999999 99999999998 77 999976
No 113
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.97 E-value=2.5e-29 Score=201.11 Aligned_cols=223 Identities=11% Similarity=0.085 Sum_probs=185.2
Q ss_pred ecce-eEEeeecceeeEEEEe-eccceeeEEEEEccc--ccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecC---
Q 024185 9 PITQ-ALLFARQNIILILLES-LCGIYQCMIIEFFAT--SKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLML--- 81 (271)
Q Consensus 9 ~~~~-~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~--- 81 (271)
|... .++.+..++.+..++. ..+.. ..+.. |...+.++.|+| +.. +++++.|+.|++||+++
T Consensus 66 ~~~~~~l~~~~~dg~i~~wd~~~~~~~-----~~~~~~~~~~~v~~l~~~~-~~~-----l~s~~~d~~i~iwd~~~~~~ 134 (342)
T 1yfq_A 66 DNTDLQIYVGTVQGEILKVDLIGSPSF-----QALTNNEANLGICRICKYG-DDK-----LIAASWDGLIEVIDPRNYGD 134 (342)
T ss_dssp ESSSEEEEEEETTSCEEEECSSSSSSE-----EECBSCCCCSCEEEEEEET-TTE-----EEEEETTSEEEEECHHHHTT
T ss_pred CCCCcEEEEEcCCCeEEEEEeccCCce-----EeccccCCCCceEEEEeCC-CCE-----EEEEcCCCeEEEEccccccc
Confidence 4445 6777788999999987 65522 44777 999999999999 777 88999999999999987
Q ss_pred ------cceeEEEecC-CcceEEEcCCCCEEEEEecCCeEEEEeCCC-CCCCcceEEEecCCccceEEEEEcC-CCcEEE
Q 024185 82 ------ASFQGILRLR-GRPTVAFDQQGLVFAVAMEAGAIKLFDSRS-YDKGPFDTFLVGGDTAEVCDIKFSN-DGKSML 152 (271)
Q Consensus 82 ------~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~ 152 (271)
++.+..+... .+.+++|+|++ +++++.++.|++||+++ ... ........|...+.+++|+| ++++++
T Consensus 135 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~--~~~~~~~~~~~~i~~i~~~~~~~~~l~ 210 (342)
T 1yfq_A 135 GVIAVKNLNSNNTKVKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDD--NGTIEESGLKYQIRDVALLPKEQEGYA 210 (342)
T ss_dssp BCEEEEESCSSSSSSCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTC--CCEEEECSCSSCEEEEEECSGGGCEEE
T ss_pred ccccccCCeeeEEeeCCceEEEEecCCc--EEEEeCCCeEEEEECCccccc--cceeeecCCCCceeEEEECCCCCCEEE
Confidence 6666655522 46679999887 99999999999999988 543 12334557888999999999 999999
Q ss_pred EEecCCeEEEEECCCC------eEEEEeecCCC-------CCceeeEEECCCCCEEEEecCCCcEEEEEcCCceeEEEec
Q 024185 153 LTTTNNNIYVLDAYGG------EKRCGFSLEPS-------PNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWN 219 (271)
Q Consensus 153 ~~~~d~~i~~~d~~~~------~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 219 (271)
+++.||.+++||++.. +....+..+.. ...+.+++|+|++++|++++.||.|++||+.+++.+..+.
T Consensus 211 ~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~ 290 (342)
T 1yfq_A 211 CSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFA 290 (342)
T ss_dssp EEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECC
T ss_pred EEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhh
Confidence 9999999999999876 67777777754 2359999999999999999999999999999999999999
Q ss_pred CC-cceeEEEEEecCCcEEEEeC--Ce-EEEEc
Q 024185 220 GN-IGVVACLKWAPRRAMFVAAS--SV-LSFWI 248 (271)
Q Consensus 220 ~~-~~~v~~~~~s~~~~~l~~~~--~~-v~iw~ 248 (271)
+| ...|.+++ |++++|++++ |. .+.|.
T Consensus 291 ~~h~~~v~~~~--~~~~~l~s~s~Dg~~~~~~~ 321 (342)
T 1yfq_A 291 KFNEDSVVKIA--CSDNILCLATSDDTFKTNAA 321 (342)
T ss_dssp CCSSSEEEEEE--ECSSEEEEEEECTHHHHCSS
T ss_pred cccCCCceEec--CCCCeEEEEecCCccccccc
Confidence 98 99999999 9999999998 65 44443
No 114
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3.1e-29 Score=223.72 Aligned_cols=229 Identities=10% Similarity=0.130 Sum_probs=181.6
Q ss_pred ecceeEEeeecceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEE
Q 024185 9 PITQALLFARQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGIL 88 (271)
Q Consensus 9 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 88 (271)
|..+.++.+..++.+.+|+.... ..... ..|...|.+++|+| +++ |++++.|++|++||+++++.+..+
T Consensus 27 pdg~~lAsgs~Dg~I~lw~~~~~----~~~~~-~~~~~~V~~l~fsp-g~~-----L~S~s~D~~v~lWd~~~~~~~~~~ 95 (902)
T 2oaj_A 27 FTQNLLAIATVTGEVHIYGQQQV----EVVIK-LEDRSAIKEMRFVK-GIY-----LVVINAKDTVYVLSLYSQKVLTTV 95 (902)
T ss_dssp TTTTEEEEEETTSEEEEECSTTC----EEEEE-CSSCCCEEEEEEET-TTE-----EEEEETTCEEEEEETTTCSEEEEE
T ss_pred CCCCEEEEEeCCCEEEEEeCCCc----EEEEE-cCCCCCEEEEEEcC-CCE-----EEEEECcCeEEEEECCCCcEEEEE
Confidence 45566777788999999876544 22222 34678899999999 776 889999999999999999988888
Q ss_pred ecC-CcceEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcceE-------EEecCCccceEEEEEcCC-CcEEEEEecCCe
Q 024185 89 RLR-GRPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDT-------FLVGGDTAEVCDIKFSND-GKSMLLTTTNNN 159 (271)
Q Consensus 89 ~~~-~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-------~~~~~~~~~v~~~~~s~~-~~~l~~~~~d~~ 159 (271)
..+ .+.+++|+|++++|++|+.||.|++||+++++...+.. ..+.+|.+.|.+++|+|+ +..+++++.|+.
T Consensus 96 ~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~ 175 (902)
T 2oaj_A 96 FVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVT 175 (902)
T ss_dssp ECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCE
T ss_pred cCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCc
Confidence 644 46779999999999999999999999998766311111 234678999999999996 578999999999
Q ss_pred EEEEECCCCeEEEEeecCC----------------CCCceeeEEECCCCCEEEEecCCCcEEEEEcCCceeEEE--e---
Q 024185 160 IYVLDAYGGEKRCGFSLEP----------------SPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVAC--W--- 218 (271)
Q Consensus 160 i~~~d~~~~~~~~~~~~~~----------------~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~--~--- 218 (271)
| +||+++++.++.+..+. +...|.+++|+|+|++|++++.||.|++||+++++++.. +
T Consensus 176 v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~ 254 (902)
T 2oaj_A 176 L-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMARTVFET 254 (902)
T ss_dssp E-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEEECSSCS
T ss_pred E-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEEeeccc
Confidence 9 99999999988887551 113499999999999999999999999999999988764 2
Q ss_pred cC-------------CcceeEEEEEec----CC-cEEEEeC-C------eEEEEcC
Q 024185 219 NG-------------NIGVVACLKWAP----RR-AMFVAAS-S------VLSFWIP 249 (271)
Q Consensus 219 ~~-------------~~~~v~~~~~s~----~~-~~l~~~~-~------~v~iw~~ 249 (271)
.. |...|.+++|++ ++ .++++++ . .+++|++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~ 310 (902)
T 2oaj_A 255 EINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDL 310 (902)
T ss_dssp CTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEE
T ss_pred ccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEec
Confidence 11 345799999964 43 5677774 2 6888884
No 115
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.97 E-value=1.1e-28 Score=199.60 Aligned_cols=210 Identities=15% Similarity=0.118 Sum_probs=159.1
Q ss_pred EcccccceEEeeEEecCCchhhh------hhhhhhccCceEEEEEecCcceeEE----Eec-----C--CcceEEEcCCC
Q 024185 40 FFATSKGIRRGLFLSACLQLMIA------LCLVLLTTALEYGIFVLMLASFQGI----LRL-----R--GRPTVAFDQQG 102 (271)
Q Consensus 40 ~~~~~~~~v~~~~~s~~~~~~~~------~~l~s~~~dg~i~iwd~~~~~~~~~----~~~-----~--~~~~~~~~~~~ 102 (271)
.+.+|...+.+++++++ .++. ..+++++.|+.+++|++.+...... ... + .+.+++|+|||
T Consensus 68 ~l~~~~~~v~s~~~~~~--~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg 145 (365)
T 4h5i_A 68 ALEDNDDSPTAIDASKG--IILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREG 145 (365)
T ss_dssp ECCTTSCCCCEEEEETT--EEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTS
T ss_pred EccCCCCceEEEEeCCC--EEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCC
Confidence 46677777777766543 1110 1177899999999999876542211 111 1 14569999999
Q ss_pred CEEEEEe--cCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEecCCeEEEEECCCCeEEEEeecCCCC
Q 024185 103 LVFAVAM--EAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSP 180 (271)
Q Consensus 103 ~~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~ 180 (271)
+++++++ .|++|++||+++++. ...+. |...|.+++|+|||+++++++.+ .+.+|+..+++.+.......+.
T Consensus 146 ~~la~as~~~d~~i~iwd~~~~~~----~~~~~-~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~ 219 (365)
T 4h5i_A 146 TVAAIASSKVPAIMRIIDPSDLTE----KFEIE-TRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIARKTDFDKN 219 (365)
T ss_dssp SCEEEEESCSSCEEEEEETTTTEE----EEEEE-CSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEEEECCCCTT
T ss_pred CEEEEEECCCCCEEEEeECCCCcE----EEEeC-CCCceEEEEEccCCceEEeccce-eEEEEEeccCcceeeeecCCCC
Confidence 9987654 689999999998775 44444 77889999999999999998855 5677777777766544333333
Q ss_pred CceeeEEECCCCCEEEEecCCC----cEEEEEcCCcee----EEEecCCcceeEEEEEecCCcEEEEeC--CeEEEEcCC
Q 024185 181 NTNTEATFTPDGQYVVSGSGDG----TLHAWNINTRNE----VACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPN 250 (271)
Q Consensus 181 ~~v~~~~~~~~~~~l~~~~~dg----~i~iwd~~~~~~----~~~~~~~~~~v~~~~~s~~~~~l~~~~--~~v~iw~~~ 250 (271)
..+.+++|+|+++++++++.|+ .++.|++..... ...+.+|...|++++|+|||++||+|+ +.|+|||++
T Consensus 220 ~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~ 299 (365)
T 4h5i_A 220 WSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLK 299 (365)
T ss_dssp EEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETT
T ss_pred CCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECC
Confidence 4599999999999999998877 688899876554 345678999999999999999999998 889999999
Q ss_pred CCCCCcC
Q 024185 251 PSSNSTD 257 (271)
Q Consensus 251 ~~~~~~~ 257 (271)
+++++..
T Consensus 300 ~~~~~~~ 306 (365)
T 4h5i_A 300 DLSMSKI 306 (365)
T ss_dssp TTEEEEE
T ss_pred CCcEEEE
Confidence 9887654
No 116
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=9.5e-29 Score=205.37 Aligned_cols=228 Identities=8% Similarity=-0.053 Sum_probs=180.8
Q ss_pred ecceeE-EeeecceeeEEEEee--ccceeeEEEEEcc--cccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcc
Q 024185 9 PITQAL-LFARQNIILILLESL--CGIYQCMIIEFFA--TSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLAS 83 (271)
Q Consensus 9 ~~~~~l-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 83 (271)
|....| +.+..++.+.+|+.. .+. ..+.+. .+...+.+++|+|+++. |++++.+|.+++|++.+++
T Consensus 112 ~d~~~l~~~~~~dg~v~iwd~~~~~~~----~~~~~~~~~~~~~v~~~~~sp~~~~-----l~~~~~~g~v~~~~~~~~~ 182 (450)
T 2vdu_B 112 SDESRLIACADSDKSLLVFDVDKTSKN----VLKLRKRFCFSKRPNAISIAEDDTT-----VIIADKFGDVYSIDINSIP 182 (450)
T ss_dssp TTSSEEEEEEGGGTEEEEEEECSSSSS----CEEEEEEEECSSCEEEEEECTTSSE-----EEEEETTSEEEEEETTSCC
T ss_pred CCCCEEEEEECCCCeEEEEECcCCCCc----eeeeeecccCCCCceEEEEcCCCCE-----EEEEeCCCcEEEEecCCcc
Confidence 334454 445568999999887 442 222233 56688999999999998 8899999999999998876
Q ss_pred eeE----EEecCC--cceEEEcCC---CCEEEEEecCCeEEEEeCCCCCCCcceEEE-ecCCccceEEEEEcCCCcEEEE
Q 024185 84 FQG----ILRLRG--RPTVAFDQQ---GLVFAVAMEAGAIKLFDSRSYDKGPFDTFL-VGGDTAEVCDIKFSNDGKSMLL 153 (271)
Q Consensus 84 ~~~----~~~~~~--~~~~~~~~~---~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~~ 153 (271)
... .+.+|. +.+++|+|+ +++|++++.|+.|++||+.+++. ... +.+|...|.+++|+ ++++|++
T Consensus 183 ~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~----~~~~~~~h~~~v~~~~~s-d~~~l~s 257 (450)
T 2vdu_B 183 EEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFI----VDKWLFGHKHFVSSICCG-KDYLLLS 257 (450)
T ss_dssp CSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTC----EEEECCCCSSCEEEEEEC-STTEEEE
T ss_pred cccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCce----eeeeecCCCCceEEEEEC-CCCEEEE
Confidence 543 566664 677999999 99999999999999999998775 433 56899999999999 9999999
Q ss_pred EecCCeEEEEECCCCeEEEEeecC-----------------------CCCCceeeEEECCCCCEEEEec-CCCcEEEEEc
Q 024185 154 TTTNNNIYVLDAYGGEKRCGFSLE-----------------------PSPNTNTEATFTPDGQYVVSGS-GDGTLHAWNI 209 (271)
Q Consensus 154 ~~~d~~i~~~d~~~~~~~~~~~~~-----------------------~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~ 209 (271)
++.|+.|++||+++++.+..+..+ .....+.+++|+|+++++++++ .++.|++|++
T Consensus 258 ~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 258 AGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEM 337 (450)
T ss_dssp EESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEE
T ss_pred EeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEe
Confidence 999999999999999988877632 1124588999999999999998 8999999999
Q ss_pred --CCc---eeEEEecCCcceeEEEEEecCCcEEEEeC--------CeEEEEcCCC
Q 024185 210 --NTR---NEVACWNGNIGVVACLKWAPRRAMFVAAS--------SVLSFWIPNP 251 (271)
Q Consensus 210 --~~~---~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--------~~v~iw~~~~ 251 (271)
.++ +.+..+..| ..|.+++|+|++.++++++ +.|.+|.++.
T Consensus 338 ~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~ 391 (450)
T 2vdu_B 338 SEKQKGDLALKQIITFP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNL 391 (450)
T ss_dssp CSSSTTCEEEEEEEECS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEET
T ss_pred ccCCCCceeeccEeccC-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEc
Confidence 555 677788887 7899999999654444433 1278887643
No 117
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.97 E-value=2.1e-27 Score=193.52 Aligned_cols=229 Identities=12% Similarity=0.085 Sum_probs=182.0
Q ss_pred ceeEEeee-cceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEe
Q 024185 11 TQALLFAR-QNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILR 89 (271)
Q Consensus 11 ~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 89 (271)
...++++. .++.+..++...+ .....+..+. .+.+++|+|+++.+ +++++.++.|++||+++++.+..+.
T Consensus 43 g~~l~~~~~~d~~i~v~d~~~~----~~~~~~~~~~-~v~~~~~spdg~~l----~~~~~~~~~v~v~d~~~~~~~~~~~ 113 (391)
T 1l0q_A 43 GTKVYVANAHSNDVSIIDTATN----NVIATVPAGS-SPQGVAVSPDGKQV----YVTNMASSTLSVIDTTSNTVAGTVK 113 (391)
T ss_dssp SSEEEEEEGGGTEEEEEETTTT----EEEEEEECSS-SEEEEEECTTSSEE----EEEETTTTEEEEEETTTTEEEEEEE
T ss_pred CCEEEEECCCCCeEEEEECCCC----eEEEEEECCC-CccceEECCCCCEE----EEEECCCCEEEEEECCCCeEEEEEe
Confidence 34454443 6788888887666 3334455444 78899999999973 2466778999999999999888887
Q ss_pred cCC-cceEEEcCCCCEE-EEEecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEE-EEEecCCeEEEEECC
Q 024185 90 LRG-RPTVAFDQQGLVF-AVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSM-LLTTTNNNIYVLDAY 166 (271)
Q Consensus 90 ~~~-~~~~~~~~~~~~l-~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~d~~i~~~d~~ 166 (271)
.+. +..++|+|+++++ ++++.++.|++||+.+++. ...+..+ ..+.+++|+|+++++ ++++.++.|++||++
T Consensus 114 ~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~----~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~ 188 (391)
T 1l0q_A 114 TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAV----INTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTV 188 (391)
T ss_dssp CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE----EEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred CCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcE----EEEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECC
Confidence 654 5669999999977 6777799999999988764 3444444 557999999999888 566778999999999
Q ss_pred CCeEEEEeecCCCCCceeeEEECCCCCEEEEec---CCCcEEEEEcCCceeEEEecCCcceeEEEEEecCCcEE-EEeC-
Q 024185 167 GGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGS---GDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMF-VAAS- 241 (271)
Q Consensus 167 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~- 241 (271)
+++....+..+. .+.+++|+|+++++++++ .++.|++||+++++.+..+..|.. +.+++|+|+++++ ++++
T Consensus 189 ~~~~~~~~~~~~---~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~s~~~ 264 (391)
T 1l0q_A 189 TNSVIDTVKVEA---APSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPD-PAGIAVTPDGKKVYVALSF 264 (391)
T ss_dssp TTEEEEEEECSS---EEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCSS-EEEEEECTTSSEEEEEETT
T ss_pred CCeEEEEEecCC---CccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCCC-ccEEEEccCCCEEEEEcCC
Confidence 998887776433 388899999999999887 689999999999999998887654 7899999999877 4555
Q ss_pred -CeEEEEcCCCCCCCcC
Q 024185 242 -SVLSFWIPNPSSNSTD 257 (271)
Q Consensus 242 -~~v~iw~~~~~~~~~~ 257 (271)
+.|++||+.+++....
T Consensus 265 d~~v~v~d~~~~~~~~~ 281 (391)
T 1l0q_A 265 XNTVSVIDTATNTITAT 281 (391)
T ss_dssp TTEEEEEETTTTEEEEE
T ss_pred CCEEEEEECCCCcEEEE
Confidence 8899999998766543
No 118
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.3e-29 Score=208.43 Aligned_cols=191 Identities=8% Similarity=-0.022 Sum_probs=146.5
Q ss_pred cccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEecCCcceEEEcCCCCEEEEEecCCeEEEEeCC
Q 024185 41 FATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILRLRGRPTVAFDQQGLVFAVAMEAGAIKLFDSR 120 (271)
Q Consensus 41 ~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~ 120 (271)
+.+|.+.+.+++|+|+| .++.+.+|+.+.......-....+.+++|+|+|++||+++.||.|++||.+
T Consensus 48 l~gh~~~v~~V~FsPdg------------~~~~~~~~~~~~~~~~~~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~ 115 (588)
T 2j04_A 48 INCNSKNLFHVKEFPLE------------FENKLDFELAQQNGLLNSQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDN 115 (588)
T ss_dssp CSSBGGGTEEEEEECCC------------CCCTTTTSCCCSSCSSTTSCSCCEEEEEECSSSSCEEEEETTSCEEEEETT
T ss_pred ecCCCccEEEEEECCCC------------CcceEEEEeCCCceEeecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCC
Confidence 46788888888888876 234444454432221111123346779999999999999999999999954
Q ss_pred CCCCCcceEEEecCCcc-----ceEEEEEcCCCcEEEEEecCCeEEEEECCCCe-------EEEEeecCC--CCCceeeE
Q 024185 121 SYDKGPFDTFLVGGDTA-----EVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGE-------KRCGFSLEP--SPNTNTEA 186 (271)
Q Consensus 121 ~~~~~~~~~~~~~~~~~-----~v~~~~~s~~~~~l~~~~~d~~i~~~d~~~~~-------~~~~~~~~~--~~~~v~~~ 186 (271)
+ . ...+. |.. .+.+++|||||++|++|+.||+|++||+.+++ .+.++..+. +...|.++
T Consensus 116 ~--~----l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sV 188 (588)
T 2j04_A 116 K--M----LTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHI 188 (588)
T ss_dssp E--E----EEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEE
T ss_pred c--e----eeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEE
Confidence 4 2 33345 554 59999999999999999999999999998875 256653222 22469999
Q ss_pred EECCCCCEEEEecCCCcEEEEEcCCcee---EEEe-cCCcceeEEEEEecCCcEEEEeC-CeEEEEcCCCCCC
Q 024185 187 TFTPDGQYVVSGSGDGTLHAWNINTRNE---VACW-NGNIGVVACLKWAPRRAMFVAAS-SVLSFWIPNPSSN 254 (271)
Q Consensus 187 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~---~~~~-~~~~~~v~~~~~s~~~~~l~~~~-~~v~iw~~~~~~~ 254 (271)
+|+||| +++++.|+++++||+.+++. .+++ .+|...|.+++|+ |..|++++ +.|++||+.+++.
T Consensus 189 awSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~~~tIkLWd~~~~~~ 257 (588)
T 2j04_A 189 VWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTCPGYVHKIDLKNYSI 257 (588)
T ss_dssp EEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEECSSEEEEEETTTTEE
T ss_pred EEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CCEEEEEeCCeEEEEECCCCeE
Confidence 999999 78888899999999988773 3566 4788899999999 57888887 9999999998776
No 119
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.97 E-value=2.4e-27 Score=193.16 Aligned_cols=222 Identities=12% Similarity=0.100 Sum_probs=179.8
Q ss_pred eecceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEecC-Ccce
Q 024185 17 ARQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILRLR-GRPT 95 (271)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~~ 95 (271)
+..++.+..++...+ .....+.++.. +.+++|+|+++.+ +++++.|+.|++||+++++.+..+..+ .+..
T Consensus 8 ~~~d~~v~v~d~~~~----~~~~~~~~~~~-~~~~~~s~dg~~l----~~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~ 78 (391)
T 1l0q_A 8 NSESDNISVIDVTSN----KVTATIPVGSN-PMGAVISPDGTKV----YVANAHSNDVSIIDTATNNVIATVPAGSSPQG 78 (391)
T ss_dssp ETTTTEEEEEETTTT----EEEEEEECSSS-EEEEEECTTSSEE----EEEEGGGTEEEEEETTTTEEEEEEECSSSEEE
T ss_pred cCCCCEEEEEECCCC----eEEEEeecCCC-cceEEECCCCCEE----EEECCCCCeEEEEECCCCeEEEEEECCCCccc
Confidence 345789999988776 44445666654 7889999999873 357789999999999999998888765 4566
Q ss_pred EEEcCCCCEEEEEe-cCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEE-EEEecCCeEEEEECCCCeEEEE
Q 024185 96 VAFDQQGLVFAVAM-EAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSM-LLTTTNNNIYVLDAYGGEKRCG 173 (271)
Q Consensus 96 ~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~d~~i~~~d~~~~~~~~~ 173 (271)
++|+|++++|++++ .++.|++||+.+++. ...+.. ...+.+++|+|+++.+ ++++.++.|++||+++++.+..
T Consensus 79 ~~~spdg~~l~~~~~~~~~v~v~d~~~~~~----~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~ 153 (391)
T 1l0q_A 79 VAVSPDGKQVYVTNMASSTLSVIDTTSNTV----AGTVKT-GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINT 153 (391)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEETTTTEE----EEEEEC-SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred eEECCCCCEEEEEECCCCEEEEEECCCCeE----EEEEeC-CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEE
Confidence 99999999886554 569999999998764 333433 4578999999999987 5777799999999999998888
Q ss_pred eecCCCCCceeeEEECCCCCEE-EEecCCCcEEEEEcCCceeEEEecCCcceeEEEEEecCCcEEEEeC-----CeEEEE
Q 024185 174 FSLEPSPNTNTEATFTPDGQYV-VSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS-----SVLSFW 247 (271)
Q Consensus 174 ~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-----~~v~iw 247 (271)
+..+.. +.+++|+|+++++ ++++.++.|++||+++++....+. +...+.+++|+|+++++++++ +.|++|
T Consensus 154 ~~~~~~---~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~ 229 (391)
T 1l0q_A 154 VSVGRS---PKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVK-VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMI 229 (391)
T ss_dssp EECCSS---EEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-CSSEEEEEEECTTSSEEEEEEECSSCCEEEEE
T ss_pred EecCCC---cceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEe-cCCCccceEECCCCCEEEEEecCcCCCcEEEE
Confidence 776543 7889999999987 577788999999999999888876 455789999999999887764 679999
Q ss_pred cCCCCCCCc
Q 024185 248 IPNPSSNST 256 (271)
Q Consensus 248 ~~~~~~~~~ 256 (271)
|+.+++...
T Consensus 230 d~~~~~~~~ 238 (391)
T 1l0q_A 230 DTGTNKITA 238 (391)
T ss_dssp ETTTTEEEE
T ss_pred ECCCCeEEE
Confidence 998876543
No 120
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.97 E-value=4.1e-28 Score=195.54 Aligned_cols=220 Identities=11% Similarity=0.112 Sum_probs=166.3
Q ss_pred eeecceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCc-ceeEEEecCCcc
Q 024185 16 FARQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLA-SFQGILRLRGRP 94 (271)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~~~ 94 (271)
.+..++.+.+|+...+ ..+..+. +...+.++.++++... ...|+.|++||+.++ +.+..+.. ...
T Consensus 76 ~~~~d~~v~iWd~~~~----~~~~~~~-~~~~v~~v~~~~~~~~--------~~~~~~i~i~d~~~~~~~~~~~~~-~~~ 141 (355)
T 3vu4_A 76 VTGVKEVVHIWDDVKK----QDVSRIK-VDAPVKDLFLSREFIV--------VSYGDVISVFKFGNPWKRITDDIR-FGG 141 (355)
T ss_dssp ECSSTTEEEEEETTTT----EEEEEEE-CSSCEEEEEECSSEEE--------EEETTEEEEEESSTTCCBSSCCEE-EEE
T ss_pred EECCccEEEEEECCCC----cEEEEEE-CCCceEEEEEcCCEEE--------EEEcCEEEEEECCCCceeeEEecc-CCc
Confidence 3455678888887776 3333344 4567888999887532 235889999999988 66666655 344
Q ss_pred eEEEcCCCCEEEE--EecCCeEEEEeCCCCCC------C-----cce-EEEecCCccceEEEEEcCCCcEEEEEecCCe-
Q 024185 95 TVAFDQQGLVFAV--AMEAGAIKLFDSRSYDK------G-----PFD-TFLVGGDTAEVCDIKFSNDGKSMLLTTTNNN- 159 (271)
Q Consensus 95 ~~~~~~~~~~l~~--~~~d~~i~i~d~~~~~~------~-----~~~-~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~- 159 (271)
.+++++ +++++ |+.+|.|++||+.+++. . ... ...+.+|.+.|.+++|+|+|++|++++.|++
T Consensus 142 ~~~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~ 219 (355)
T 3vu4_A 142 VCEFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTI 219 (355)
T ss_dssp EEEEET--TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSE
T ss_pred eEEEEc--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCE
Confidence 577887 66666 57899999999987541 0 001 4557899999999999999999999999998
Q ss_pred EEEEECCCCeEEEEee-c-CCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCCcee--EEEec----------------
Q 024185 160 IYVLDAYGGEKRCGFS-L-EPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNE--VACWN---------------- 219 (271)
Q Consensus 160 i~~~d~~~~~~~~~~~-~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~--~~~~~---------------- 219 (271)
|++||+++++.+..+. + |... |.+++|+|++++|++++.|+.|++||++++.. ...+.
T Consensus 220 v~iwd~~~~~~~~~~~~g~h~~~--v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (355)
T 3vu4_A 220 IRVFKTEDGVLVREFRRGLDRAD--VVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCN 297 (355)
T ss_dssp EEEEETTTCCEEEEEECTTCCSC--EEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEE
T ss_pred EEEEECCCCcEEEEEEcCCCCCc--EEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeE
Confidence 9999999999999987 3 5554 99999999999999999999999999976431 11111
Q ss_pred -----CCcceeEEEEEecCCcEEEEeC--CeEEEEcCCCCC
Q 024185 220 -----GNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNPSS 253 (271)
Q Consensus 220 -----~~~~~v~~~~~s~~~~~l~~~~--~~v~iw~~~~~~ 253 (271)
.+......++|+||++++++++ |.+++|++..+.
T Consensus 298 ~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~~ 338 (355)
T 3vu4_A 298 FKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVFDD 338 (355)
T ss_dssp EECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEEET
T ss_pred EEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEcCC
Confidence 1112236789999999999997 889999987654
No 121
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.96 E-value=9.4e-27 Score=192.17 Aligned_cols=226 Identities=11% Similarity=0.094 Sum_probs=180.6
Q ss_pred ecceeEEee-ecceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEE
Q 024185 9 PITQALLFA-RQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGI 87 (271)
Q Consensus 9 ~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 87 (271)
+....++++ ..++.+..++...+ .....+..|...+.+++++|+++.+ +++++.|+.|++||+++++.+..
T Consensus 178 ~~~~~~~~s~~~d~~v~~~d~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~~~~~~i~~~d~~~~~~~~~ 249 (433)
T 3bws_A 178 PEHNELWVSQMQANAVHVFDLKTL----AYKATVDLTGKWSKILLYDPIRDLV----YCSNWISEDISVIDRKTKLEIRK 249 (433)
T ss_dssp GGGTEEEEEEGGGTEEEEEETTTC----CEEEEEECSSSSEEEEEEETTTTEE----EEEETTTTEEEEEETTTTEEEEE
T ss_pred cCCCEEEEEECCCCEEEEEECCCc----eEEEEEcCCCCCeeEEEEcCCCCEE----EEEecCCCcEEEEECCCCcEEEE
Confidence 334445544 45788888887665 3334466788899999999999873 34667899999999999998888
Q ss_pred EecCC-cceEEEcCCCCEEEEEe--------cCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEE-EEEecC
Q 024185 88 LRLRG-RPTVAFDQQGLVFAVAM--------EAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSM-LLTTTN 157 (271)
Q Consensus 88 ~~~~~-~~~~~~~~~~~~l~~~~--------~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~d 157 (271)
+..+. +..++|+|+++++++++ .|+.|++||+.+++. . ....|...+.+++|+|+++.+ ++++.+
T Consensus 250 ~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~----~-~~~~~~~~~~~~~~~~~g~~l~~~~~~~ 324 (433)
T 3bws_A 250 TDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKL----I-DTIGPPGNKRHIVSGNTENKIYVSDMCC 324 (433)
T ss_dssp CCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEE----E-EEEEEEECEEEEEECSSTTEEEEEETTT
T ss_pred ecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcE----E-eeccCCCCcceEEECCCCCEEEEEecCC
Confidence 77654 45699999999999887 488999999988763 2 222456689999999999765 555889
Q ss_pred CeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEecC---------------CCcEEEEEcCCceeEEEecCCc
Q 024185 158 NNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSG---------------DGTLHAWNINTRNEVACWNGNI 222 (271)
Q Consensus 158 ~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---------------dg~i~iwd~~~~~~~~~~~~~~ 222 (271)
+.|++||+++++....+.. .. .+.+++|+|+++++++++. ||.|++||+.+++.+..+..+
T Consensus 325 ~~v~v~d~~~~~~~~~~~~-~~--~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~- 400 (433)
T 3bws_A 325 SKIEVYDLKEKKVQKSIPV-FD--KPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAG- 400 (433)
T ss_dssp TEEEEEETTTTEEEEEEEC-SS--SEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECS-
T ss_pred CEEEEEECCCCcEEEEecC-CC--CCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCC-
Confidence 9999999999998887763 33 3889999999999888776 579999999999999988764
Q ss_pred ceeEEEEEecCCcEEEEeC---CeEEEEcCCC
Q 024185 223 GVVACLKWAPRRAMFVAAS---SVLSFWIPNP 251 (271)
Q Consensus 223 ~~v~~~~~s~~~~~l~~~~---~~v~iw~~~~ 251 (271)
..+.+++|+|+|++|++++ +.|++|+++.
T Consensus 401 ~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 401 NQPTGLDVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp SSEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred CCCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence 4689999999999888663 8899999864
No 122
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.96 E-value=9.5e-28 Score=187.52 Aligned_cols=176 Identities=11% Similarity=0.082 Sum_probs=129.5
Q ss_pred ceeeEEEEeec-cceeeEEEEEcccccceEEeeEEec---CCchhhhhhhhhhccCceEEEEEecCcceeEEEecCC---
Q 024185 20 NIILILLESLC-GIYQCMIIEFFATSKGIRRGLFLSA---CLQLMIALCLVLLTTALEYGIFVLMLASFQGILRLRG--- 92 (271)
Q Consensus 20 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~s~---~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~--- 92 (271)
++.+..++... + +....+..|...+..++|++ ++.. +++++.|++|++||+++++.++++.++.
T Consensus 156 d~~V~~~~~s~dG----~~~~s~~~~~~~v~~l~fs~~~g~~~~-----LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v 226 (356)
T 2w18_A 156 DQQVEVMTFAEDG----GGKENQFLMPPEETILTFAEVQGMQEA-----LLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQ 226 (356)
T ss_dssp TCEEEEEEECTTS----CEEEEEEECCCSSCEEEEEEEETSTTE-----EEEEETTSEEEEEETTTCCEEEEEECCC---
T ss_pred CCcEEEEEECCCC----ceeeeeccCCCceeeEEeeccCCCCce-----EEEecCCCcEEEEECCCCcEEEEEcCCCcce
Confidence 45555555422 3 22333445666666667776 4555 8899999999999999999999998653
Q ss_pred --cceEEEcCCCCEE------------EEEecCCeEEEEeCCCCCCCcceEEE---ecCCccceEEEEEcCCCcEEEEEe
Q 024185 93 --RPTVAFDQQGLVF------------AVAMEAGAIKLFDSRSYDKGPFDTFL---VGGDTAEVCDIKFSNDGKSMLLTT 155 (271)
Q Consensus 93 --~~~~~~~~~~~~l------------~~~~~d~~i~i~d~~~~~~~~~~~~~---~~~~~~~v~~~~~s~~~~~l~~~~ 155 (271)
+.+++|+|+|+++ ++|+.|++|++||..+++. +.... ..+|...+.+..++ +.++++++
T Consensus 227 ~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~--l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS 302 (356)
T 2w18_A 227 ASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLS--VGVMLYCLPPGQAGRFLEGDVK--DHCAAAIL 302 (356)
T ss_dssp CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEE--EEEEEECCCTTCCCCEEEEEEE--TTEEEEEE
T ss_pred eeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEE--EEEEEeeccCCCcceeEccccC--CCEEEEEc
Confidence 3347899999876 5678899999999988764 22221 14666665544444 78899999
Q ss_pred cCCeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEecCCCcEEEEEc
Q 024185 156 TNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNI 209 (271)
Q Consensus 156 ~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~ 209 (271)
.|++|++||+.+++++.++.+|... .+..++|+|||++|++|+.|++|++||+
T Consensus 303 ~DgTIkIWDl~tGk~l~tL~gH~~~-vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 303 TSGTIAIWDLLLGQCTALLPPVSDQ-HWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp TTSCEEEEETTTCSEEEEECCC--C-CCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred CCCcEEEEECCCCcEEEEecCCCCC-eEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 9999999999999999999877654 1345899999999999999999999996
No 123
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.96 E-value=3.7e-28 Score=198.43 Aligned_cols=197 Identities=9% Similarity=0.038 Sum_probs=135.0
Q ss_pred EEecCCchhhhhhhhhhccCceEEEEEecCcceeE-----EEecCC--cceEEEcC--------CCCEEEEEecCCeEEE
Q 024185 52 FLSACLQLMIALCLVLLTTALEYGIFVLMLASFQG-----ILRLRG--RPTVAFDQ--------QGLVFAVAMEAGAIKL 116 (271)
Q Consensus 52 ~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~-----~~~~~~--~~~~~~~~--------~~~~l~~~~~d~~i~i 116 (271)
.+++++.. +++++.|++|++||.++++... .+.+|. +.+++|+| |+++|++++.|++|++
T Consensus 96 ~~~~~~~~-----las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~ 170 (393)
T 4gq1_A 96 SSPVYSLF-----LACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLII 170 (393)
T ss_dssp -CCEEEEE-----EEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEE
T ss_pred ecCCCCCE-----EEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEE
Confidence 34444555 8899999999999999886543 235564 67799987 7899999999999999
Q ss_pred EeCCCCCCCcceEEEecCCccceEEEEEcCCCc-EEEEEecCCeEEEEECCCCeEEEEeecC------------------
Q 024185 117 FDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGK-SMLLTTTNNNIYVLDAYGGEKRCGFSLE------------------ 177 (271)
Q Consensus 117 ~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~d~~i~~~d~~~~~~~~~~~~~------------------ 177 (271)
||++++.. ...+.+|...+.+++|+|++. +|++++.|++|++||+++++.......+
T Consensus 171 Wd~~~~~~----~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~ 246 (393)
T 4gq1_A 171 WRLTDEGP----ILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVN 246 (393)
T ss_dssp EEEETTEE----EEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC-
T ss_pred EECCCCce----eeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEeccccccee
Confidence 99987664 555667889999999999874 7999999999999999887654332211
Q ss_pred -----CCCCceeeEEEC-CCCCEEEEecCCCcEEEEEcCCceeEEEecCCcceeEEEEEec-------------------
Q 024185 178 -----PSPNTNTEATFT-PDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAP------------------- 232 (271)
Q Consensus 178 -----~~~~~v~~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~------------------- 232 (271)
.....+.++.|+ ||++.+++++.|+.+++||+.+++....+..|...+..+.+.|
T Consensus 247 ~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (393)
T 4gq1_A 247 TCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPR 326 (393)
T ss_dssp -----CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSS
T ss_pred eeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccC
Confidence 111346778875 8999999999999999999998877776665554444443333
Q ss_pred -CCcEEEEeC--CeEEEEcCCCCCCCcC
Q 024185 233 -RRAMFVAAS--SVLSFWIPNPSSNSTD 257 (271)
Q Consensus 233 -~~~~l~~~~--~~v~iw~~~~~~~~~~ 257 (271)
++.++++++ +.|++||+.+++....
T Consensus 327 ~~~~~~~sgs~Dg~V~lwd~~~~~~~~~ 354 (393)
T 4gq1_A 327 YMDYFATAHSQHGLIQLINTYEKDSNSI 354 (393)
T ss_dssp CTTEEEEEETTTTEEEEEETTCTTCCEE
T ss_pred CCCEEEEEECCCCEEEEEECCCCcEEEE
Confidence 334666776 8899999998876543
No 124
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.96 E-value=2.1e-26 Score=190.11 Aligned_cols=233 Identities=9% Similarity=0.062 Sum_probs=183.3
Q ss_pred ceeEEeee-cceeeEEEEeeccceeeE-EEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEE
Q 024185 11 TQALLFAR-QNIILILLESLCGIYQCM-IIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGIL 88 (271)
Q Consensus 11 ~~~l~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 88 (271)
...++++. .++.+..++...+..... ....+.+|.+.+.+++++|++.. +++++.|+.|++||+++++.+..+
T Consensus 133 ~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-----~~s~~~d~~v~~~d~~~~~~~~~~ 207 (433)
T 3bws_A 133 NTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNEL-----WVSQMQANAVHVFDLKTLAYKATV 207 (433)
T ss_dssp SSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEE-----EEEEGGGTEEEEEETTTCCEEEEE
T ss_pred CCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEE-----EEEECCCCEEEEEECCCceEEEEE
Confidence 44555554 356788888766532210 00035578889999999999988 889999999999999999988888
Q ss_pred ecCC--cceEEEcCCCCEEEEEe-cCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEe--------cC
Q 024185 89 RLRG--RPTVAFDQQGLVFAVAM-EAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTT--------TN 157 (271)
Q Consensus 89 ~~~~--~~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--------~d 157 (271)
..+. +.+++|+|+++++++++ .++.|++||+++++. ...+.. ...+.+++|+|+++++++++ .|
T Consensus 208 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~----~~~~~~-~~~~~~~~~~~~g~~l~~~~~~~~~~~~~d 282 (433)
T 3bws_A 208 DLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLE----IRKTDK-IGLPRGLLLSKDGKELYIAQFSASNQESGG 282 (433)
T ss_dssp ECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEE----EEECCC-CSEEEEEEECTTSSEEEEEEEESCTTCSCC
T ss_pred cCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcE----EEEecC-CCCceEEEEcCCCCEEEEEECCCCccccCC
Confidence 7654 56699999999886554 789999999987764 444443 45699999999999999888 48
Q ss_pred CeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEE-EEecCCCcEEEEEcCCceeEEEecCCcceeEEEEEecCCcE
Q 024185 158 NNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYV-VSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAM 236 (271)
Q Consensus 158 ~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 236 (271)
+.|++||+++++....+.... .+.+++|+|+++++ ++++.++.|++||+.+++.+..+. +...+.+++|+|++++
T Consensus 283 g~i~~~d~~~~~~~~~~~~~~---~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~ 358 (433)
T 3bws_A 283 GRLGIYSMDKEKLIDTIGPPG---NKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP-VFDKPNTIALSPDGKY 358 (433)
T ss_dssp EEEEEEETTTTEEEEEEEEEE---CEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE-CSSSEEEEEECTTSSE
T ss_pred CeEEEEECCCCcEEeeccCCC---CcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec-CCCCCCeEEEcCCCCE
Confidence 899999999998877664322 37889999999755 566889999999999999888886 5677899999999998
Q ss_pred EEEeC-C----------------eEEEEcCCCCCCCcC
Q 024185 237 FVAAS-S----------------VLSFWIPNPSSNSTD 257 (271)
Q Consensus 237 l~~~~-~----------------~v~iw~~~~~~~~~~ 257 (271)
+++++ + .|++||+.+++....
T Consensus 359 l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~ 396 (433)
T 3bws_A 359 LYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEF 396 (433)
T ss_dssp EEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEE
T ss_pred EEEEecCCCccccccccccccceEEEEEECCCCcEEEE
Confidence 88775 2 899999988765543
No 125
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.96 E-value=1.2e-26 Score=191.07 Aligned_cols=196 Identities=14% Similarity=0.246 Sum_probs=162.5
Q ss_pred EEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEec--CC--cceEEEcCCCCEEEEEecCCeEEEEeCCCCC
Q 024185 48 RRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILRL--RG--RPTVAFDQQGLVFAVAMEAGAIKLFDSRSYD 123 (271)
Q Consensus 48 v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~~--~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~ 123 (271)
.+.++||+++ . |+ .+.|++|++||.++++..+.+.. |. +.+++|+|+|++|++|+.||.|++||+++++
T Consensus 108 ~~~l~wS~~n-~-----lA-vgld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~ 180 (420)
T 4gga_A 108 LNLVDWSSGN-V-----LA-VALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQK 180 (420)
T ss_dssp CBCEEECTTS-E-----EE-EEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTE
T ss_pred ceeEEECCCC-E-----EE-EEeCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCc
Confidence 4568888754 3 33 45699999999999998887754 33 6789999999999999999999999999887
Q ss_pred CCcceEEEecCCccceEEEEEcCCCcEEEEEecCCeEEEEECCCC-eEEEEeecCCCCCceeeEEECCCCCEEEEecCCC
Q 024185 124 KGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGG-EKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDG 202 (271)
Q Consensus 124 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 202 (271)
. ...+.+|...+.+++++ +..+++++.|+.+++||.+.. ..+..+..|... +..+.++|+++++++++.|+
T Consensus 181 ~----~~~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~--~~~~~~~~~g~~l~s~~~D~ 252 (420)
T 4gga_A 181 R----LRNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQE--VCGLRWAPDGRHLASGGNDN 252 (420)
T ss_dssp E----EEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSC--EEEEEECTTSSEEEEEETTS
T ss_pred E----EEEEeCCCCceEEEeeC--CCEEEEEeCCCceeEeeecccceeeEEecccccc--eeeeeecCCCCeeeeeeccc
Confidence 6 67788999999998875 578999999999999998764 445667777766 89999999999999999999
Q ss_pred cEEEEEcCCce----eEEEecCCcceeEEEEEecCCc-EEEEe--C--CeEEEEcCCCCCCCcCC
Q 024185 203 TLHAWNINTRN----EVACWNGNIGVVACLKWAPRRA-MFVAA--S--SVLSFWIPNPSSNSTDE 258 (271)
Q Consensus 203 ~i~iwd~~~~~----~~~~~~~~~~~v~~~~~s~~~~-~l~~~--~--~~v~iw~~~~~~~~~~~ 258 (271)
.+++||..+++ .+.....|...|.+++|+|++. +++++ + +.|++||+.+++.....
T Consensus 253 ~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~ 317 (420)
T 4gga_A 253 LVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAV 317 (420)
T ss_dssp CEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEE
T ss_pred cceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceee
Confidence 99999998765 3566778999999999999754 55554 2 78999999988765443
No 126
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.96 E-value=4.3e-26 Score=187.38 Aligned_cols=223 Identities=16% Similarity=0.134 Sum_probs=170.6
Q ss_pred ceeEEeeecc------eeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCc---eEEEEEecC
Q 024185 11 TQALLFARQN------IILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTAL---EYGIFVLML 81 (271)
Q Consensus 11 ~~~l~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg---~i~iwd~~~ 81 (271)
...+++...+ +.+..++...+ ..+.+..|...+.+++|+|+|+. +++++.++ .|++||+++
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~-----~~~~l~~~~~~v~~~~~Spdg~~-----la~~s~~~~~~~i~~~d~~t 212 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDGY-----NQFVVHRSPQPLMSPAWSPDGSK-----LAYVTFESGRSALVIQTLAN 212 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTSC-----SCEEEEEESSCEEEEEECTTSSE-----EEEEECTTSSCEEEEEETTT
T ss_pred CCEEEEEEecCCCCccceEEEEcCCCC-----CCEEEeCCCCcceeeEEcCCCCE-----EEEEEecCCCcEEEEEECCC
Confidence 4566666553 67777776432 12335667889999999999998 67777764 999999999
Q ss_pred cceeEEEecC--CcceEEEcCCCCEEE-EEecCC--eEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEec
Q 024185 82 ASFQGILRLR--GRPTVAFDQQGLVFA-VAMEAG--AIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTT 156 (271)
Q Consensus 82 ~~~~~~~~~~--~~~~~~~~~~~~~l~-~~~~d~--~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~ 156 (271)
++... +..+ .+.+++|+|||++|+ +++.++ .|++||+.+++ ...+..|...+.+++|+|||++|++++.
T Consensus 213 g~~~~-l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~-----~~~l~~~~~~~~~~~~spdg~~l~~~s~ 286 (415)
T 2hqs_A 213 GAVRQ-VASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQ-----IRQVTDGRSNNTEPTWFPDSQNLAFTSD 286 (415)
T ss_dssp CCEEE-EECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC-----EEECCCCSSCEEEEEECTTSSEEEEEEC
T ss_pred CcEEE-eecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCC-----EEeCcCCCCcccceEECCCCCEEEEEEC
Confidence 88754 4433 356699999999888 555555 59999998876 3456678889999999999999998886
Q ss_pred -CC--eEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEecCC---CcEEEEEcCCceeEEEecCCcceeEEEEE
Q 024185 157 -NN--NIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGD---GTLHAWNINTRNEVACWNGNIGVVACLKW 230 (271)
Q Consensus 157 -d~--~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~~~~v~~~~~ 230 (271)
++ .|++||+.+++. ..+..+.. .+.+++|+|||++|++++.+ ..|++||+.+++.. .+..+. .+.+++|
T Consensus 287 ~~g~~~i~~~d~~~~~~-~~l~~~~~--~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~-~l~~~~-~~~~~~~ 361 (415)
T 2hqs_A 287 QAGRPQVYKVNINGGAP-QRITWEGS--QNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLSSTF-LDETPSL 361 (415)
T ss_dssp TTSSCEEEEEETTSSCC-EECCCSSS--EEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEE-ECCCSS-SCEEEEE
T ss_pred CCCCcEEEEEECCCCCE-EEEecCCC--cccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEE-EecCCC-CcCCeEE
Confidence 44 788889988764 33433433 48889999999999988764 58999999988774 455554 7899999
Q ss_pred ecCCcEEEEeC--C---eEEEEcCCCCCC
Q 024185 231 APRRAMFVAAS--S---VLSFWIPNPSSN 254 (271)
Q Consensus 231 s~~~~~l~~~~--~---~v~iw~~~~~~~ 254 (271)
+|||++|++++ + .|++||+.++..
T Consensus 362 spdg~~l~~~s~~~~~~~l~~~d~~g~~~ 390 (415)
T 2hqs_A 362 APNGTMVIYSSSQGMGSVLNLVSTDGRFK 390 (415)
T ss_dssp CTTSSEEEEEEEETTEEEEEEEETTSCCE
T ss_pred cCCCCEEEEEEcCCCccEEEEEECCCCcE
Confidence 99999988886 3 699999986543
No 127
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.95 E-value=3.9e-26 Score=180.70 Aligned_cols=202 Identities=16% Similarity=0.302 Sum_probs=158.1
Q ss_pred EEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEec--CC--cceEEEcCCCCEEEEEecCCeEEEEeCCCCC
Q 024185 48 RRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILRL--RG--RPTVAFDQQGLVFAVAMEAGAIKLFDSRSYD 123 (271)
Q Consensus 48 v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~~--~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~ 123 (271)
.++++||+++ . |++ +.|++|++||+++++.++.+.. |. +.+++|+|++++|++|+.||.|++||+++++
T Consensus 28 ~~~l~WS~~~-~-----lAv-g~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~ 100 (318)
T 4ggc_A 28 LNLVDWSSGN-V-----LAV-ALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQK 100 (318)
T ss_dssp CBCEEECTTS-E-----EEE-EETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTE
T ss_pred ceEEEECCCC-E-----EEE-EeCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCce
Confidence 4678999886 3 334 5699999999999998888764 33 6779999999999999999999999998765
Q ss_pred C-------------------------------------CcceEEEecCCccceEEEEEcCCCcEEEEEecCCeEEEEECC
Q 024185 124 K-------------------------------------GPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAY 166 (271)
Q Consensus 124 ~-------------------------------------~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~ 166 (271)
. .......+.+|...+..+.++++++++++++.|+.|++||++
T Consensus 101 ~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~ 180 (318)
T 4ggc_A 101 RLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSA 180 (318)
T ss_dssp EEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESS
T ss_pred eEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECC
Confidence 3 001122344577888999999999999999999999999998
Q ss_pred CCeEE----EEeecCCCCCceeeEEECCCCCEE---EEecCCCcEEEEEcCCceeEEEecCCcceeEEEEEecCCcEEEE
Q 024185 167 GGEKR----CGFSLEPSPNTNTEATFTPDGQYV---VSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVA 239 (271)
Q Consensus 167 ~~~~~----~~~~~~~~~~~v~~~~~~~~~~~l---~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 239 (271)
+++.. .....+. ..+.++.++|++..+ ++++.++.|++||.+......... +...+..+.|+|++..+++
T Consensus 181 ~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~ 257 (318)
T 4ggc_A 181 PGEGGWVPLQTFTQHQ--GAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD-AHSQVCSILWSPHYKELIS 257 (318)
T ss_dssp CBTTBSCCSEEECCCC--SCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEEETTTTEEEE
T ss_pred CCcccccceeeecccC--CceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccccc-ceeeeeeeeecccccceEE
Confidence 76532 2223333 448899999986633 467788999999999888777665 5667999999999988776
Q ss_pred eC----CeEEEEcCCCCCCCcCCC
Q 024185 240 AS----SVLSFWIPNPSSNSTDES 259 (271)
Q Consensus 240 ~~----~~v~iw~~~~~~~~~~~~ 259 (271)
++ +.|++||++++++.....
T Consensus 258 ~sg~~d~~i~iwd~~~~~~~~~l~ 281 (318)
T 4ggc_A 258 GHGFAQNQLVIWKYPTMAKVAELK 281 (318)
T ss_dssp EECTTTCCEEEEETTTCCEEEEEC
T ss_pred EEEcCCCEEEEEECCCCcEEEEEc
Confidence 53 779999999988766544
No 128
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.94 E-value=2e-25 Score=184.23 Aligned_cols=200 Identities=16% Similarity=0.145 Sum_probs=153.4
Q ss_pred cceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcc----------ee------EEEec-CCcceEEEcCCCCEEE-
Q 024185 45 KGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLAS----------FQ------GILRL-RGRPTVAFDQQGLVFA- 106 (271)
Q Consensus 45 ~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~----------~~------~~~~~-~~~~~~~~~~~~~~l~- 106 (271)
....+.+++++++.. +++++.++ +++|+..... .. ..+.. ..+.+++|+|++++|+
T Consensus 36 ~~~~n~lavs~~~~~-----l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav 109 (434)
T 2oit_A 36 KERSSLLAVSNKYGL-----VFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSA 109 (434)
T ss_dssp CSCCBCEEEETTTTE-----EEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEE
T ss_pred CCCccEEEEecCCCE-----EEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEE
Confidence 446788999999888 67778787 8888764210 11 11111 2367799999999999
Q ss_pred ---EEecCCeEEEEeCCCC-----CC-Ccc-eEEEecCCccceEEEEEcCC-CcEEEEEecCCeEEEEECCCCeEEEEee
Q 024185 107 ---VAMEAGAIKLFDSRSY-----DK-GPF-DTFLVGGDTAEVCDIKFSND-GKSMLLTTTNNNIYVLDAYGGEKRCGFS 175 (271)
Q Consensus 107 ---~~~~d~~i~i~d~~~~-----~~-~~~-~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~d~~i~~~d~~~~~~~~~~~ 175 (271)
+++.|+.|++||+.+. +. .++ ....+.+|...|.+++|+|+ +++|++++.||+|++||+++++......
T Consensus 110 ~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~ 189 (434)
T 2oit_A 110 CMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATL 189 (434)
T ss_dssp EEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEE
T ss_pred EEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeecc
Confidence 6788999999998654 11 112 23445679999999999997 8899999999999999999987766555
Q ss_pred cCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCCceeEEEecCC-------cceeEEEEEecCCcEEEEeC-C-----
Q 024185 176 LEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGN-------IGVVACLKWAPRRAMFVAAS-S----- 242 (271)
Q Consensus 176 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-------~~~v~~~~~s~~~~~l~~~~-~----- 242 (271)
.|... +.+++|+|+|++|++|+.||.|++||++ ++....+..| ...|.+++|++++.++++.+ +
T Consensus 190 ~~~~~--v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~ 266 (434)
T 2oit_A 190 PSTVA--VTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLE 266 (434)
T ss_dssp CGGGC--EEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSS
T ss_pred CCCCc--eeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccC
Confidence 55544 9999999999999999999999999998 5655555433 34899999999998886553 2
Q ss_pred ---eEEEEcCCCCC
Q 024185 243 ---VLSFWIPNPSS 253 (271)
Q Consensus 243 ---~v~iw~~~~~~ 253 (271)
.+++|++...+
T Consensus 267 ~~~~v~i~~l~~~~ 280 (434)
T 2oit_A 267 TSPDVVMALLPKKE 280 (434)
T ss_dssp SCCEEEEEECCCTT
T ss_pred CCCceEEEEeccCC
Confidence 29999998653
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.93 E-value=3.8e-24 Score=175.82 Aligned_cols=217 Identities=17% Similarity=0.074 Sum_probs=161.2
Q ss_pred eeEEEEe--eccceeeEEEEEcccccceEEeeEEecC--------------CchhhhhhhhhhccC------ceEEEEEe
Q 024185 22 ILILLES--LCGIYQCMIIEFFATSKGIRRGLFLSAC--------------LQLMIALCLVLLTTA------LEYGIFVL 79 (271)
Q Consensus 22 ~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~s~~--------------~~~~~~~~l~s~~~d------g~i~iwd~ 79 (271)
.+.+++. ..+. ......+.+|...+..+++++. +.. ++.++.+ +.|++||+
T Consensus 94 ~i~lwd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~-----l~~~s~~~~~~~~~~i~i~d~ 166 (415)
T 2hqs_A 94 AYQLVDTGGAPGT--VLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTR-----IAYVVQTNGGQFPYELRVSDY 166 (415)
T ss_dssp EEEEEECSSSTTC--EEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCE-----EEEEEECSSSSCCEEEEEEET
T ss_pred EEEEEeCCCCCCC--EEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCE-----EEEEEecCCCCccceEEEEcC
Confidence 7788887 6663 2222446677776766666541 333 3333332 79999999
Q ss_pred cCcceeEEEecC--CcceEEEcCCCCEEEEEecCC---eEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEE-E
Q 024185 80 MLASFQGILRLR--GRPTVAFDQQGLVFAVAMEAG---AIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSML-L 153 (271)
Q Consensus 80 ~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~d~---~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-~ 153 (271)
+.+. .+.+..| .+.+++|+|||++|++++.++ .|++||+.+++. ..+..|...+.+++|+|||++|+ +
T Consensus 167 ~g~~-~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~-----~~l~~~~~~~~~~~~spdg~~la~~ 240 (415)
T 2hqs_A 167 DGYN-QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAV-----RQVASFPRHNGAPAFSPDGSKLAFA 240 (415)
T ss_dssp TSCS-CEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-----EEEECCSSCEEEEEECTTSSEEEEE
T ss_pred CCCC-CEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcE-----EEeecCCCcccCEEEcCCCCEEEEE
Confidence 7544 4555544 456699999999999998775 999999998773 34567788999999999999888 5
Q ss_pred EecCC--eEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEecC-CC--cEEEEEcCCceeEEEecCCcceeEEE
Q 024185 154 TTTNN--NIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSG-DG--TLHAWNINTRNEVACWNGNIGVVACL 228 (271)
Q Consensus 154 ~~~d~--~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg--~i~iwd~~~~~~~~~~~~~~~~v~~~ 228 (271)
++.++ .|++||+++++. ..+..+.. .+.+++|+|||++|++++. ++ .|++||+.+++. ..+..+...+.++
T Consensus 241 ~~~~g~~~i~~~d~~~~~~-~~l~~~~~--~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~ 316 (415)
T 2hqs_A 241 LSKTGSLNLYVMDLASGQI-RQVTDGRS--NNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAP-QRITWEGSQNQDA 316 (415)
T ss_dssp ECTTSSCEEEEEETTTCCE-EECCCCSS--CEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCC-EECCCSSSEEEEE
T ss_pred EecCCCceEEEEECCCCCE-EeCcCCCC--cccceEECCCCCEEEEEECCCCCcEEEEEECCCCCE-EEEecCCCcccCe
Confidence 55554 599999998876 44554544 4889999999999988876 44 688889988764 4455577788999
Q ss_pred EEecCCcEEEEeC-----CeEEEEcCCCCCCC
Q 024185 229 KWAPRRAMFVAAS-----SVLSFWIPNPSSNS 255 (271)
Q Consensus 229 ~~s~~~~~l~~~~-----~~v~iw~~~~~~~~ 255 (271)
+|+|||++|++++ ..|++||+.+++..
T Consensus 317 ~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~ 348 (415)
T 2hqs_A 317 DVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ 348 (415)
T ss_dssp EECTTSSEEEEEEECSSCEEEEEEETTTCCEE
T ss_pred EECCCCCEEEEEECcCCceEEEEEECCCCCEE
Confidence 9999999998876 26999999987653
No 130
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.93 E-value=3.9e-23 Score=164.61 Aligned_cols=229 Identities=8% Similarity=0.083 Sum_probs=172.5
Q ss_pred eEEeeecceeeEEEEeeccceeeEEEEEcccccc--eEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEec
Q 024185 13 ALLFARQNIILILLESLCGIYQCMIIEFFATSKG--IRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILRL 90 (271)
Q Consensus 13 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 90 (271)
.++.+..++.+..++...+ .....+..... ....++++|+++.+ ++++..++.|.+||+.+++.+..+..
T Consensus 3 ~~v~~~~~~~v~~~d~~~~----~~~~~~~~~~~~~~~~~~~~s~dg~~l----~v~~~~~~~v~~~d~~~~~~~~~~~~ 74 (337)
T 1pby_B 3 YILAPARPDKLVVIDTEKM----AVDKVITIADAGPTPMVPMVAPGGRIA----YATVNKSESLVKIDLVTGETLGRIDL 74 (337)
T ss_dssp EEEEEETTTEEEEEETTTT----EEEEEEECTTCTTCCCCEEECTTSSEE----EEEETTTTEEEEEETTTCCEEEEEEC
T ss_pred EEEEcCCCCeEEEEECCCC----cEEEEEEcCCCCCCccceEEcCCCCEE----EEEeCCCCeEEEEECCCCCeEeeEEc
Confidence 3445566888999987766 22333332221 46779999999764 34667789999999999998877754
Q ss_pred C-------CcceEEEcCCCCEEEEEe------------cCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEE
Q 024185 91 R-------GRPTVAFDQQGLVFAVAM------------EAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSM 151 (271)
Q Consensus 91 ~-------~~~~~~~~~~~~~l~~~~------------~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 151 (271)
. ....++|+|++++++++. .++.|.+||+.+++. ...+.. ...+.+++|+|+++++
T Consensus 75 ~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~----~~~~~~-~~~~~~~~~s~dg~~l 149 (337)
T 1pby_B 75 STPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSR----RKAFEA-PRQITMLAWARDGSKL 149 (337)
T ss_dssp CBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEE----EEEEEC-CSSCCCEEECTTSSCE
T ss_pred CCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcE----EEEEeC-CCCcceeEECCCCCEE
Confidence 2 455699999999998886 579999999987664 233332 3457889999999988
Q ss_pred EEEecCCeEEEEECCCCeEEEEeecCC--CC-------------------------------------------------
Q 024185 152 LLTTTNNNIYVLDAYGGEKRCGFSLEP--SP------------------------------------------------- 180 (271)
Q Consensus 152 ~~~~~d~~i~~~d~~~~~~~~~~~~~~--~~------------------------------------------------- 180 (271)
+++ ++.|++||+.+++....+.... .+
T Consensus 150 ~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~ 227 (337)
T 1pby_B 150 YGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLE 227 (337)
T ss_dssp EEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETT
T ss_pred EEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCC
Confidence 887 6789999999888766554322 00
Q ss_pred -------------CceeeEEECCCCCEEEEecCCCcEEEEEcCCceeEEEecCCcceeEEEEEecCCcEEEEeC--CeEE
Q 024185 181 -------------NTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVLS 245 (271)
Q Consensus 181 -------------~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~~v~ 245 (271)
..+.+++|+|||++++++ ++.|.+||+.+++.+..+..+ ..+.+++|+|+|++|++++ +.|+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~i~ 304 (337)
T 1pby_B 228 TGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLP-HSYYSVNVSTDGSTVWLGGALGDLA 304 (337)
T ss_dssp TCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECS-SCCCEEEECTTSCEEEEESBSSEEE
T ss_pred CCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCC-CceeeEEECCCCCEEEEEcCCCcEE
Confidence 113358999999999888 689999999999988887644 4578999999999888776 8899
Q ss_pred EEcCCCCCCCcCCC
Q 024185 246 FWIPNPSSNSTDES 259 (271)
Q Consensus 246 iw~~~~~~~~~~~~ 259 (271)
+||+++++......
T Consensus 305 v~d~~~~~~~~~~~ 318 (337)
T 1pby_B 305 AYDAETLEKKGQVD 318 (337)
T ss_dssp EEETTTCCEEEEEE
T ss_pred EEECcCCcEEEEEE
Confidence 99999987665443
No 131
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.93 E-value=3.6e-23 Score=161.58 Aligned_cols=216 Identities=14% Similarity=0.085 Sum_probs=161.0
Q ss_pred cceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecC-cceeEEEecCC---cc
Q 024185 19 QNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLML-ASFQGILRLRG---RP 94 (271)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~---~~ 94 (271)
.++.+..++...+. .. .+..|...+.++.|+|++++ +++++ ++.|++||+++ ++.......+. +.
T Consensus 20 ~~~~i~~~d~~~~~----~~-~~~~~~~~v~~~~~spdg~~-----l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~ 88 (297)
T 2ojh_A 20 MRSSIEIFNIRTRK----MR-VVWQTPELFEAPNWSPDGKY-----LLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNN 88 (297)
T ss_dssp CCEEEEEEETTTTE----EE-EEEEESSCCEEEEECTTSSE-----EEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCS
T ss_pred cceeEEEEeCCCCc----ee-eeccCCcceEeeEECCCCCE-----EEEEc-CCeEEEEeCCCCCCceEecccccccccc
Confidence 35777888776652 21 24456788999999999998 55544 88999999999 87776665552 45
Q ss_pred eEEEcCCCCEEEEEec--CC--eEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEE-EEecCCeEEEEEC--CC
Q 024185 95 TVAFDQQGLVFAVAME--AG--AIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSML-LTTTNNNIYVLDA--YG 167 (271)
Q Consensus 95 ~~~~~~~~~~l~~~~~--d~--~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-~~~~d~~i~~~d~--~~ 167 (271)
.++|+|++++|++++. ++ .|..++..+++. ..+..+ ..+..++|+|++++++ +++.++.+++|++ .+
T Consensus 89 ~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~-----~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~ 162 (297)
T 2ojh_A 89 DHGISPDGALYAISDKVEFGKSAIYLLPSTGGTP-----RLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDS 162 (297)
T ss_dssp CCEECTTSSEEEEEECTTTSSCEEEEEETTCCCC-----EECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTT
T ss_pred ceEECCCCCEEEEEEeCCCCcceEEEEECCCCce-----EEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCC
Confidence 6999999999999983 33 455555555442 223333 3588999999999887 6778999999985 33
Q ss_pred CeEEEEeecCCCCCceeeEEECCCCCEEEEec-CCCcEEEEEcC-CceeEEEecCCcceeEEEEEecCCcEEEEeC----
Q 024185 168 GEKRCGFSLEPSPNTNTEATFTPDGQYVVSGS-GDGTLHAWNIN-TRNEVACWNGNIGVVACLKWAPRRAMFVAAS---- 241 (271)
Q Consensus 168 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~-~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~---- 241 (271)
++ ...+..+.. .+.+++|+|++++++.++ .++.+.+|++. .+.....+..|...+..++|+|+|++|++++
T Consensus 163 ~~-~~~~~~~~~--~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~ 239 (297)
T 2ojh_A 163 GV-ETRLTHGEG--RNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDAD 239 (297)
T ss_dssp CC-EEECCCSSS--CEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETT
T ss_pred Cc-ceEcccCCC--ccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCC
Confidence 44 344444443 488999999999888766 58899999986 5667778888888899999999999988776
Q ss_pred ---------CeEEEEcCCCCCC
Q 024185 242 ---------SVLSFWIPNPSSN 254 (271)
Q Consensus 242 ---------~~v~iw~~~~~~~ 254 (271)
+.|.+||+++++.
T Consensus 240 ~~~~~~~~~~~l~~~d~~~~~~ 261 (297)
T 2ojh_A 240 VFDHPRDLDVRVQLMDMDGGNV 261 (297)
T ss_dssp CCSCCSSEEEEEEEEETTSCSC
T ss_pred CCcccccCceEEEEEecCCCCc
Confidence 2399999988765
No 132
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.93 E-value=8.1e-23 Score=163.98 Aligned_cols=224 Identities=9% Similarity=0.025 Sum_probs=170.6
Q ss_pred ceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEecCC-------
Q 024185 20 NIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILRLRG------- 92 (271)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~------- 92 (271)
++.+..++...+. ....+.. ......+.++|+++.+ +++...++.|.+||.++++.+..+..+.
T Consensus 68 ~~~v~~~d~~~~~----~~~~~~~-~~~~~~~~~s~dg~~l----~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~ 138 (353)
T 3vgz_A 68 GGVVYRLDPVTLE----VTQAIHN-DLKPFGATINNTTQTL----WFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEV 138 (353)
T ss_dssp SEEEEEECTTTCC----EEEEEEE-SSCCCSEEEETTTTEE----EEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSC
T ss_pred CccEEEEcCCCCe----EEEEEec-CCCcceEEECCCCCEE----EEEecCCCEEEEEeCCCCeeEEEEecCCCcccccc
Confidence 4567777765552 2222332 2346678999999863 4466778999999999999888886643
Q ss_pred ----cceEEEcCCCCEEEEEe--cCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEecCCeEEEEECC
Q 024185 93 ----RPTVAFDQQGLVFAVAM--EAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAY 166 (271)
Q Consensus 93 ----~~~~~~~~~~~~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~ 166 (271)
...++|+|+++++++++ .++.|.+||..+++. ...+..+...+.+++|+|+++++++++.++.+.+||+.
T Consensus 139 ~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~----~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~ 214 (353)
T 3vgz_A 139 RPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKL----KTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTA 214 (353)
T ss_dssp CCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEE----EEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETT
T ss_pred CCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCce----EEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECC
Confidence 34599999999888776 478999999988774 44444455568899999999999999999999999999
Q ss_pred CCeEEEEeecCCC--CCceeeEEECCCCCEEEEecC-CCcEEEEEcCCceeEEEecCCcceeEEEEEecCCcEEEEeC--
Q 024185 167 GGEKRCGFSLEPS--PNTNTEATFTPDGQYVVSGSG-DGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS-- 241 (271)
Q Consensus 167 ~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-- 241 (271)
+++....+..... ...+..++|+|++++++.++. ++.|.+||+.+++.+..+..... ..++|+|+|++++.++
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~--~~~~~s~dg~~l~v~~~~ 292 (353)
T 3vgz_A 215 DNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPES--LAVLFNPARNEAYVTHRQ 292 (353)
T ss_dssp TTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSSC--CCEEEETTTTEEEEEETT
T ss_pred CCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCC--ceEEECCCCCEEEEEECC
Confidence 9998887765221 234778999999998776665 58999999999998888765432 5799999999655443
Q ss_pred -CeEEEEcCCCCCCCcCC
Q 024185 242 -SVLSFWIPNPSSNSTDE 258 (271)
Q Consensus 242 -~~v~iw~~~~~~~~~~~ 258 (271)
+.|.+||..+++.....
T Consensus 293 ~~~v~~~d~~~~~~~~~~ 310 (353)
T 3vgz_A 293 AGKVSVIDAKSYKVVKTF 310 (353)
T ss_dssp TTEEEEEETTTTEEEEEE
T ss_pred CCeEEEEECCCCeEEEEE
Confidence 78999999888765433
No 133
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.92 E-value=1.8e-22 Score=160.76 Aligned_cols=223 Identities=7% Similarity=-0.000 Sum_probs=160.7
Q ss_pred eecceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcce-eEEEecCC-cc
Q 024185 17 ARQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASF-QGILRLRG-RP 94 (271)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~-~~~~~~~~-~~ 94 (271)
...++.+..++...+.. ...+..+.... .++++|+++.+ ++++..++.|.+||.++++. ...+..+. ..
T Consensus 16 ~~~~~~v~~~d~~~~~~----~~~~~~~~~~~-~~~~s~dg~~l----~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~ 86 (331)
T 3u4y_A 16 EQHLRRISFFSTDTLEI----LNQITLGYDFV-DTAITSDCSNV----VVTSDFCQTLVQIETQLEPPKVVAIQEGQSSM 86 (331)
T ss_dssp EGGGTEEEEEETTTCCE----EEEEECCCCEE-EEEECSSSCEE----EEEESTTCEEEEEECSSSSCEEEEEEECSSCC
T ss_pred ecCCCeEEEEeCcccce----eeeEEccCCcc-eEEEcCCCCEE----EEEeCCCCeEEEEECCCCceeEEecccCCCCc
Confidence 34578888998776632 22233445555 89999999963 33555689999999999887 66665543 44
Q ss_pred e-EEEcCCCCEEEEEecCC---eEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEe-cCCe-EEEEECCCC
Q 024185 95 T-VAFDQQGLVFAVAMEAG---AIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTT-TNNN-IYVLDAYGG 168 (271)
Q Consensus 95 ~-~~~~~~~~~l~~~~~d~---~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d~~-i~~~d~~~~ 168 (271)
. ++|+|++++++++..++ .|.+||+.+++. ...+.. .....+++|+|+|+++++++ .++. +.+|++...
T Consensus 87 ~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~----~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~ 161 (331)
T 3u4y_A 87 ADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKF----ISTIPI-PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDAD 161 (331)
T ss_dssp CCEEECTTSSEEEECCCSSSSCEEEEEETTTTEE----EEEEEC-CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTT
T ss_pred cceEECCCCCEEEEecCCCCcccEEEEECCCCCe----EEEEEC-CCCccceEECCCCCEEEEEecCCCceEEEEEECCC
Confidence 4 89999999999555443 899999988764 333332 34568999999998766654 4577 999998754
Q ss_pred eEEEEe--ecCCCCCceeeEEECCCCCEEEEe-cCCCcEEEEEcCCcee---EEEecCCcceeEEEEEecCCcEEEEeC-
Q 024185 169 EKRCGF--SLEPSPNTNTEATFTPDGQYVVSG-SGDGTLHAWNINTRNE---VACWNGNIGVVACLKWAPRRAMFVAAS- 241 (271)
Q Consensus 169 ~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~---~~~~~~~~~~v~~~~~s~~~~~l~~~~- 241 (271)
..+... ..-........++|+|+|++++.+ ..++.|.+||+.+++. +..+..+ ..+..++|+|||++++.++
T Consensus 162 g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~-~~~~~~~~spdg~~l~v~~~ 240 (331)
T 3u4y_A 162 GVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTN-NLPGTIVVSRDGSTVYVLTE 240 (331)
T ss_dssp CCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECS-SCCCCEEECTTSSEEEEECS
T ss_pred CcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCC-CCCceEEECCCCCEEEEEEc
Confidence 332111 100111337889999999966554 4688999999999888 7777644 5578999999999776664
Q ss_pred --CeEEEEcCCCCCC
Q 024185 242 --SVLSFWIPNPSSN 254 (271)
Q Consensus 242 --~~v~iw~~~~~~~ 254 (271)
+.|.+||+.+++.
T Consensus 241 ~~~~i~~~d~~~~~~ 255 (331)
T 3u4y_A 241 STVDVFNFNQLSGTL 255 (331)
T ss_dssp SEEEEEEEETTTTEE
T ss_pred CCCEEEEEECCCCce
Confidence 6699999998776
No 134
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.92 E-value=1.4e-22 Score=161.40 Aligned_cols=232 Identities=10% Similarity=0.059 Sum_probs=162.8
Q ss_pred eeEEeeec-ceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccC-c--eEEEEEecCcceeEE
Q 024185 12 QALLFARQ-NIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTA-L--EYGIFVLMLASFQGI 87 (271)
Q Consensus 12 ~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~d-g--~i~iwd~~~~~~~~~ 87 (271)
+.++++.. ++.+..++...+.. ....+..+.....+++++|++++ ++++..+ + .|.+||+++++.+..
T Consensus 52 ~~l~~~~~~~~~i~~~d~~~~~~---~~~~~~~~~~~~~~~~~s~dg~~-----l~~~~~~~~~~~i~v~d~~~~~~~~~ 123 (331)
T 3u4y_A 52 SNVVVTSDFCQTLVQIETQLEPP---KVVAIQEGQSSMADVDITPDDQF-----AVTVTGLNHPFNMQSYSFLKNKFIST 123 (331)
T ss_dssp CEEEEEESTTCEEEEEECSSSSC---EEEEEEECSSCCCCEEECTTSSE-----EEECCCSSSSCEEEEEETTTTEEEEE
T ss_pred CEEEEEeCCCCeEEEEECCCCce---eEEecccCCCCccceEECCCCCE-----EEEecCCCCcccEEEEECCCCCeEEE
Confidence 33554443 66888888766633 13334555555555999999998 4444444 3 999999999998888
Q ss_pred EecCC-cceEEEcCCCCEEEEE-ecCCe-EEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEe-cCCeEEEE
Q 024185 88 LRLRG-RPTVAFDQQGLVFAVA-MEAGA-IKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTT-TNNNIYVL 163 (271)
Q Consensus 88 ~~~~~-~~~~~~~~~~~~l~~~-~~d~~-i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d~~i~~~ 163 (271)
+..+. ...++|+|+|++++++ ..++. +.+|++......................++|+|+|+++++++ .++.|++|
T Consensus 124 ~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~ 203 (331)
T 3u4y_A 124 IPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGIL 203 (331)
T ss_dssp EECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred EECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEE
Confidence 77654 4569999999866655 55577 999999865430000011113345689999999999776655 58999999
Q ss_pred ECCCCeE---EEEeecCCCCCceeeEEECCCCCEEEEec-CCCcEEEEEcCCcee--EEEecCC----cce---eEEEEE
Q 024185 164 DAYGGEK---RCGFSLEPSPNTNTEATFTPDGQYVVSGS-GDGTLHAWNINTRNE--VACWNGN----IGV---VACLKW 230 (271)
Q Consensus 164 d~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~--~~~~~~~----~~~---v~~~~~ 230 (271)
|+.+++. +..+.... .+..++|+|||++++.++ .++.|.+||+.+++. +..+..+ ... ...++|
T Consensus 204 d~~~~~~~~~~~~~~~~~---~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (331)
T 3u4y_A 204 ETQNPENITLLNAVGTNN---LPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMAL 280 (331)
T ss_dssp ECSSTTSCEEEEEEECSS---CCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEE
T ss_pred ECCCCcccceeeeccCCC---CCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEE
Confidence 9998887 66666443 367799999999776655 478899999998887 4444322 222 255899
Q ss_pred ecCCcEEEEeC---CeEEEEcCCCCCC
Q 024185 231 APRRAMFVAAS---SVLSFWIPNPSSN 254 (271)
Q Consensus 231 s~~~~~l~~~~---~~v~iw~~~~~~~ 254 (271)
+|||++|++++ +.|.+||+.....
T Consensus 281 spdg~~l~v~~~~~~~v~v~d~~~~~~ 307 (331)
T 3u4y_A 281 NKTETKLFISANISRELKVFTISGKVV 307 (331)
T ss_dssp CTTSSEEEEEETTTTEEEEEETTSCEE
T ss_pred CCCCCEEEEecCCCCcEEEEEecCCcc
Confidence 99999876554 6899999987543
No 135
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.92 E-value=5.8e-23 Score=164.50 Aligned_cols=234 Identities=10% Similarity=0.077 Sum_probs=169.9
Q ss_pred cceeEEee-ecceeeEEEEeeccceeeEEEEEccccc-ceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEE
Q 024185 10 ITQALLFA-RQNIILILLESLCGIYQCMIIEFFATSK-GIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGI 87 (271)
Q Consensus 10 ~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 87 (271)
....+++. ..++.+..++...+ ...+.+..+. .....++++|+++.+ ++++..++.|.+||+++++.+..
T Consensus 9 ~~~~~~v~~~~~~~v~~~d~~~~----~~~~~~~~~~~~~~~~~~~s~dg~~~----~v~~~~~~~i~~~d~~t~~~~~~ 80 (349)
T 1jmx_B 9 AGHEYMIVTNYPNNLHVVDVASD----TVYKSCVMPDKFGPGTAMMAPDNRTA----YVLNNHYGDIYGIDLDTCKNTFH 80 (349)
T ss_dssp TTCEEEEEEETTTEEEEEETTTT----EEEEEEECSSCCSSCEEEECTTSSEE----EEEETTTTEEEEEETTTTEEEEE
T ss_pred CCCEEEEEeCCCCeEEEEECCCC----cEEEEEecCCCCCCceeEECCCCCEE----EEEeCCCCcEEEEeCCCCcEEEE
Confidence 34444444 56889999987766 3233343332 246678999999863 34667889999999999988877
Q ss_pred EecCC--------cceEEEcCCCCEEEEEecC------------CeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCC
Q 024185 88 LRLRG--------RPTVAFDQQGLVFAVAMEA------------GAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSND 147 (271)
Q Consensus 88 ~~~~~--------~~~~~~~~~~~~l~~~~~d------------~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 147 (271)
+.... +..++|+|+|+++++++.+ +.|.+||+.+++.... ..... +...+.+++|+|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~-~~~~~-~~~~~~~~~~s~d 158 (349)
T 1jmx_B 81 ANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKP-VRTFP-MPRQVYLMRAADD 158 (349)
T ss_dssp EESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCC-SEEEE-CCSSCCCEEECTT
T ss_pred EEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccce-eeecc-CCCcccceeECCC
Confidence 76432 4669999999999998865 8999999987442000 11222 3346889999999
Q ss_pred CcEEEEEecCCeEEEEECCCCeEEEEeecCCC------------------------------------------------
Q 024185 148 GKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPS------------------------------------------------ 179 (271)
Q Consensus 148 ~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~------------------------------------------------ 179 (271)
|+ +++++. .|++||+.+++....+.....
T Consensus 159 g~-l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 235 (349)
T 1jmx_B 159 GS-LYVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGY 235 (349)
T ss_dssp SC-EEEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEE
T ss_pred Cc-EEEccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeE
Confidence 99 666543 499999999887766543320
Q ss_pred ------------------CCceeeEEECC-CCCEEEEecCCCcEEEEEcCCceeEEEecCCcceeEEEEEecCCcEEEEe
Q 024185 180 ------------------PNTNTEATFTP-DGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAA 240 (271)
Q Consensus 180 ------------------~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 240 (271)
...+..++|+| ++++++++ ++.|.+||+.+++.+..+... ..+.+++|+|+|++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~ 312 (349)
T 1jmx_B 236 LSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLD-HTYYCVAFDKKGDKLYLG 312 (349)
T ss_dssp EEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECS-SCCCEEEECSSSSCEEEE
T ss_pred EEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCC-CCccceEECCCCCEEEEe
Confidence 00244677889 99999888 889999999999988887643 347899999999887776
Q ss_pred C--CeEEEEcCCCCCCCcCCC
Q 024185 241 S--SVLSFWIPNPSSNSTDES 259 (271)
Q Consensus 241 ~--~~v~iw~~~~~~~~~~~~ 259 (271)
+ +.|++||+++++......
T Consensus 313 ~~~~~v~v~d~~~~~~~~~~~ 333 (349)
T 1jmx_B 313 GTFNDLAVFNPDTLEKVKNIK 333 (349)
T ss_dssp SBSSEEEEEETTTTEEEEEEE
T ss_pred cCCCeEEEEeccccceeeeee
Confidence 6 889999999887665543
No 136
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.91 E-value=9.6e-22 Score=156.93 Aligned_cols=232 Identities=11% Similarity=0.049 Sum_probs=157.7
Q ss_pred eeEEeeecc-eeeEEEEee--ccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEec---Cccee
Q 024185 12 QALLFARQN-IILILLESL--CGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLM---LASFQ 85 (271)
Q Consensus 12 ~~l~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~---~~~~~ 85 (271)
+.++++..+ +.+..++.. .+.. ..+..+..+. .+..++|+|+++.+ ++++..++.|.+||++ +.+..
T Consensus 50 ~~l~~~~~~~~~v~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~s~dg~~l----~~~~~~~~~i~~~d~~~~~~~~~~ 122 (343)
T 1ri6_A 50 RYLYVGVRPEFRVLAYRIAPDDGAL--TFAAESALPG-SLTHISTDHQGQFV----FVGSYNAGNVSVTRLEDGLPVGVV 122 (343)
T ss_dssp SEEEEEETTTTEEEEEEECTTTCCE--EEEEEEECSS-CCSEEEECTTSSEE----EEEETTTTEEEEEEEETTEEEEEE
T ss_pred CEEEEeecCCCeEEEEEecCCCCce--eeccccccCC-CCcEEEEcCCCCEE----EEEecCCCeEEEEECCCCcccccc
Confidence 445555544 777777665 3322 2223343333 67789999999973 2355568999999994 44455
Q ss_pred EEEecC-CcceEEEcCCCCEEEEEe-cCCeEEEEeCCC-CCCCcceEE--EecC-CccceEEEEEcCCCcEEEEEe-cCC
Q 024185 86 GILRLR-GRPTVAFDQQGLVFAVAM-EAGAIKLFDSRS-YDKGPFDTF--LVGG-DTAEVCDIKFSNDGKSMLLTT-TNN 158 (271)
Q Consensus 86 ~~~~~~-~~~~~~~~~~~~~l~~~~-~d~~i~i~d~~~-~~~~~~~~~--~~~~-~~~~v~~~~~s~~~~~l~~~~-~d~ 158 (271)
..+..+ .+..++|+|+++++++++ .++.|.+||+.+ ++. .... .... ....+.+++|+|+++++++++ .++
T Consensus 123 ~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~ 200 (343)
T 1ri6_A 123 DVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHL--VAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNS 200 (343)
T ss_dssp EEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCE--EEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTT
T ss_pred ccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCce--eeecccccccCCCCCcceEEECCCCCEEEEEeCCCC
Confidence 555544 356699999999888887 889999999987 442 1111 2222 234788999999999876665 789
Q ss_pred eEEEEECCC--CeE--EEEeecC----CCCCceeeEEECCCCCEEEE-ecCCCcEEEEEcC----CceeEEEecCCccee
Q 024185 159 NIYVLDAYG--GEK--RCGFSLE----PSPNTNTEATFTPDGQYVVS-GSGDGTLHAWNIN----TRNEVACWNGNIGVV 225 (271)
Q Consensus 159 ~i~~~d~~~--~~~--~~~~~~~----~~~~~v~~~~~~~~~~~l~~-~~~dg~i~iwd~~----~~~~~~~~~~~~~~v 225 (271)
.+.+||+.. ++. ...+... .....+..++|+|+|+++++ +..++.|.+||+. +.+.+..+..+.. +
T Consensus 201 ~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~ 279 (343)
T 1ri6_A 201 SVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-P 279 (343)
T ss_dssp EEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-C
T ss_pred EEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-c
Confidence 999999953 432 2222211 11234667999999998874 4578999999998 3445555655544 8
Q ss_pred EEEEEecCCcEEEEeC---CeEEEEcC--CCCC
Q 024185 226 ACLKWAPRRAMFVAAS---SVLSFWIP--NPSS 253 (271)
Q Consensus 226 ~~~~~s~~~~~l~~~~---~~v~iw~~--~~~~ 253 (271)
.+++|+|+|++|++++ +.+.+|++ ++++
T Consensus 280 ~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~ 312 (343)
T 1ri6_A 280 RGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGL 312 (343)
T ss_dssp CCEEECTTSSEEEEECTTTCEEEEEEEETTTTE
T ss_pred ceEEECCCCCEEEEecCCCCeEEEEEEcCCCce
Confidence 8999999999887775 78999954 4543
No 137
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.91 E-value=1.9e-21 Score=155.98 Aligned_cols=227 Identities=10% Similarity=0.059 Sum_probs=153.7
Q ss_pred ceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhc-cCceEEEEEecC-cc--eeEEEecC----
Q 024185 20 NIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLT-TALEYGIFVLML-AS--FQGILRLR---- 91 (271)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~-~dg~i~iwd~~~-~~--~~~~~~~~---- 91 (271)
++.+..++...+.. ..+..+..+......++++|+++. +++++ .++.+.+|++.. +. .+..+...
T Consensus 62 ~~~v~~~~~~~g~~--~~~~~~~~~~~~p~~~a~spdg~~-----l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p 134 (347)
T 3hfq_A 62 EGGIAAWQIDGQTA--HKLNTVVAPGTPPAYVAVDEARQL-----VYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGP 134 (347)
T ss_dssp EEEEEEEEEETTEE--EEEEEEEEESCCCSEEEEETTTTE-----EEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCS
T ss_pred CceEEEEEecCCcE--EEeeeeecCCCCCEEEEECCCCCE-----EEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCC
Confidence 46777777754422 223333445667778999999997 44444 789999999963 32 23333221
Q ss_pred -------CcceEEEcCCCCEEEEEecCCeEEEEeCC-CCCCCcceEEEecC-CccceEEEEEcCCCcEEEEE-ecCCeEE
Q 024185 92 -------GRPTVAFDQQGLVFAVAMEAGAIKLFDSR-SYDKGPFDTFLVGG-DTAEVCDIKFSNDGKSMLLT-TTNNNIY 161 (271)
Q Consensus 92 -------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~-~~d~~i~ 161 (271)
.+..++|+|+|+.+++...++.|.+|++. +++. ........ .......++|+|||++++++ ..++.+.
T Consensus 135 ~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~--~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~ 212 (347)
T 3hfq_A 135 RPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQL--SEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIA 212 (347)
T ss_dssp STTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCE--EEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEE
T ss_pred CccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcE--EEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEE
Confidence 13459999999955556668899999998 4432 11111122 22367889999999977665 5688999
Q ss_pred EEECCC--CeEE--EEeecCCCC----CceeeEEECCCCCEEE-EecCCCcEEEEEcC---CceeEEEecCCcceeEEEE
Q 024185 162 VLDAYG--GEKR--CGFSLEPSP----NTNTEATFTPDGQYVV-SGSGDGTLHAWNIN---TRNEVACWNGNIGVVACLK 229 (271)
Q Consensus 162 ~~d~~~--~~~~--~~~~~~~~~----~~v~~~~~~~~~~~l~-~~~~dg~i~iwd~~---~~~~~~~~~~~~~~v~~~~ 229 (271)
+|++.. ++.. ..+...... ..+..++|+|||++|+ +...++.|.+|++. +.+.+..+..+...+..++
T Consensus 213 v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~ 292 (347)
T 3hfq_A 213 SLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFD 292 (347)
T ss_dssp EEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEE
T ss_pred EEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEE
Confidence 999874 5532 222222211 3477899999999885 45568999999997 3355666666666789999
Q ss_pred EecCCcEEEEeC---CeEEEE--cCCCCCCC
Q 024185 230 WAPRRAMFVAAS---SVLSFW--IPNPSSNS 255 (271)
Q Consensus 230 ~s~~~~~l~~~~---~~v~iw--~~~~~~~~ 255 (271)
|+|||++|++++ +.+.+| |.+++++.
T Consensus 293 ~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 293 LDPTEAFVVVVNQNTDNATLYARDLTSGKLS 323 (347)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred ECCCCCEEEEEEcCCCcEEEEEEeCCCCeEE
Confidence 999999887775 779999 55666654
No 138
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.91 E-value=8e-24 Score=185.43 Aligned_cols=200 Identities=12% Similarity=0.050 Sum_probs=155.8
Q ss_pred eEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEecCC-----cceEEEcCCCCEEEEEecC---------C
Q 024185 47 IRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILRLRG-----RPTVAFDQQGLVFAVAMEA---------G 112 (271)
Q Consensus 47 ~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~~~d---------~ 112 (271)
....+.|+|+|++ +++ +.||+|++||..+++....+..+. +..++|||||++|++++.+ +
T Consensus 18 ~~~~~~~spdg~~-----~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~ 91 (723)
T 1xfd_A 18 HDPEAKWISDTEF-----IYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTG 91 (723)
T ss_dssp CCCCCCBSSSSCB-----CCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCS
T ss_pred cccccEEcCCCcE-----EEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeeccee
Confidence 3566899999996 444 789999999999999888887664 5679999999999999764 7
Q ss_pred eEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEecCCeEEEEECCCCeEEEEeecCCCCC-----------
Q 024185 113 AIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPN----------- 181 (271)
Q Consensus 113 ~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~----------- 181 (271)
.+++||+.+++. .......+|...+..++|||||+.|++++. +.|++||+.+++..+....+....
T Consensus 92 ~i~~~d~~~~~~--~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ 168 (723)
T 1xfd_A 92 YYVLSKIPHGDP--QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYE 168 (723)
T ss_dssp EEEEEESSSCCC--EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHH
T ss_pred eEEEEECCCCce--EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEE
Confidence 889999998774 111122344455889999999999999886 799999999887766544332211
Q ss_pred -----ceeeEEECCCCCEEEEecCCC----------------------------------cEEEEEcCCceeEEEecCC-
Q 024185 182 -----TNTEATFTPDGQYVVSGSGDG----------------------------------TLHAWNINTRNEVACWNGN- 221 (271)
Q Consensus 182 -----~v~~~~~~~~~~~l~~~~~dg----------------------------------~i~iwd~~~~~~~~~~~~~- 221 (271)
.+.+++|+|||++|++++.++ .|++||+.+++....+..+
T Consensus 169 ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~ 248 (723)
T 1xfd_A 169 EEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPD 248 (723)
T ss_dssp HTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCC
T ss_pred EEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCc
Confidence 136799999999999887543 7999999988876666554
Q ss_pred -----cceeEEEEEecCCcEEEEeC------CeEEEEcCCCCCCC
Q 024185 222 -----IGVVACLKWAPRRAMFVAAS------SVLSFWIPNPSSNS 255 (271)
Q Consensus 222 -----~~~v~~~~~s~~~~~l~~~~------~~v~iw~~~~~~~~ 255 (271)
...+..++|||||+++++.+ ..|++||+.+++..
T Consensus 249 ~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~ 293 (723)
T 1xfd_A 249 DPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCT 293 (723)
T ss_dssp CGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEE
T ss_pred cCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcce
Confidence 56789999999999887663 35999999887753
No 139
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.91 E-value=5.2e-22 Score=168.04 Aligned_cols=223 Identities=10% Similarity=0.110 Sum_probs=164.6
Q ss_pred eEEee-ecceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEe--cCcceeEEEe
Q 024185 13 ALLFA-RQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVL--MLASFQGILR 89 (271)
Q Consensus 13 ~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~--~~~~~~~~~~ 89 (271)
.++++ ..++.+..++...+ ..+..+..+.. +..++++|++++ +++++.|++|++||+ .+++.+..+.
T Consensus 150 ~~~vs~~~d~~V~v~D~~t~----~~~~~i~~g~~-~~~v~~spdg~~-----l~v~~~d~~V~v~D~~~~t~~~~~~i~ 219 (543)
T 1nir_A 150 LFSVTLRDAGQIALVDGDSK----KIVKVIDTGYA-VHISRMSASGRY-----LLVIGRDARIDMIDLWAKEPTKVAEIK 219 (543)
T ss_dssp EEEEEEGGGTEEEEEETTTC----CEEEEEECSTT-EEEEEECTTSCE-----EEEEETTSEEEEEETTSSSCEEEEEEE
T ss_pred EEEEEEcCCCeEEEEECCCc----eEEEEEecCcc-cceEEECCCCCE-----EEEECCCCeEEEEECcCCCCcEEEEEe
Confidence 34443 45678888887666 33344553333 778999999999 778888999999999 8888888887
Q ss_pred cCC-cceEEEcC----CCCEEEEEec-CCeEEEEeCCCCCCCcceEEEecC--------Cc-cceEEEEEcCCCcEE-EE
Q 024185 90 LRG-RPTVAFDQ----QGLVFAVAME-AGAIKLFDSRSYDKGPFDTFLVGG--------DT-AEVCDIKFSNDGKSM-LL 153 (271)
Q Consensus 90 ~~~-~~~~~~~~----~~~~l~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~--------~~-~~v~~~~~s~~~~~l-~~ 153 (271)
.+. ...++|+| ||+++++++. +++|.+||..+.+. .......+ |. ..+..+.++|++..+ ++
T Consensus 220 ~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~--~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs 297 (543)
T 1nir_A 220 IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEP--KQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVN 297 (543)
T ss_dssp CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCE--EEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEE
T ss_pred cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEecccccc--ceeecccCcccCccccccCCceEEEEECCCCCEEEEE
Confidence 554 45599999 9999999874 89999999988765 33333211 22 368999999977655 45
Q ss_pred EecCCeEEEEECCCCeEEE--EeecCCCCCceeeEEECCCCCEEEEec-CCCcEEEEEcCCceeEEEecC----CcceeE
Q 024185 154 TTTNNNIYVLDAYGGEKRC--GFSLEPSPNTNTEATFTPDGQYVVSGS-GDGTLHAWNINTRNEVACWNG----NIGVVA 226 (271)
Q Consensus 154 ~~~d~~i~~~d~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~----~~~~v~ 226 (271)
...++.|.+||..+.+.+. .+. +. ..+..+.|+|+|+++++++ .+++|.+||..+++++..+.. |.+...
T Consensus 298 ~~~~g~i~vvd~~~~~~l~~~~i~-~~--~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~ 374 (543)
T 1nir_A 298 VKETGKVLLVNYKDIDNLTVTSIG-AA--PFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGA 374 (543)
T ss_dssp ETTTTEEEEEECTTSSSCEEEEEE-CC--SSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCE
T ss_pred ECCCCeEEEEEecCCCcceeEEec-cC--cCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCc
Confidence 5668999999998866544 333 22 2377799999999876554 588999999999999888864 544333
Q ss_pred EEEEecC-CcEEEEeC---CeEEEEcCCC
Q 024185 227 CLKWAPR-RAMFVAAS---SVLSFWIPNP 251 (271)
Q Consensus 227 ~~~~s~~-~~~l~~~~---~~v~iw~~~~ 251 (271)
.+ ++|+ +.++++++ ++|.+||+.+
T Consensus 375 ~~-~~p~~g~~~~s~~~~d~~V~v~d~~~ 402 (543)
T 1nir_A 375 NF-VHPKYGPVWSTSHLGDGSISLIGTDP 402 (543)
T ss_dssp EE-EETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred cc-CCCCCccEEEeccCCCceEEEEEeCC
Confidence 33 4777 66777763 7899999988
No 140
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.91 E-value=1.7e-21 Score=155.56 Aligned_cols=231 Identities=13% Similarity=0.163 Sum_probs=156.7
Q ss_pred ecceeEEee-ecceeeEEEEeec-cceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccC-ceEEEEEec--Ccc
Q 024185 9 PITQALLFA-RQNIILILLESLC-GIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTA-LEYGIFVLM--LAS 83 (271)
Q Consensus 9 ~~~~~l~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~d-g~i~iwd~~--~~~ 83 (271)
|..+.++++ ..++.+..++... +.. .....+ .+...+..++|+|+++. +++++.+ +.|.+|+++ +++
T Consensus 2 ~~~~~l~~~~~~~~~v~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~spdg~~-----l~~~~~~~~~v~~~~~~~~~~~ 73 (343)
T 1ri6_A 2 SLKQTVYIASPESQQIHVWNLNHEGAL--TLTQVV-DVPGQVQPMVVSPDKRY-----LYVGVRPEFRVLAYRIAPDDGA 73 (343)
T ss_dssp CCEEEEEEEEGGGTEEEEEEECTTSCE--EEEEEE-ECSSCCCCEEECTTSSE-----EEEEETTTTEEEEEEECTTTCC
T ss_pred CceEEEEEeCCCCCeEEEEEECCCCcE--EEeeeE-ecCCCCceEEECCCCCE-----EEEeecCCCeEEEEEecCCCCc
Confidence 455566666 4578888887642 211 222222 35567788999999997 4455554 999999997 554
Q ss_pred --eeEEEecC-CcceEEEcCCCCEEEEEec-CCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEe-cCC
Q 024185 84 --FQGILRLR-GRPTVAFDQQGLVFAVAME-AGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTT-TNN 158 (271)
Q Consensus 84 --~~~~~~~~-~~~~~~~~~~~~~l~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d~ 158 (271)
.+..+..+ .+..++|+|+++++++++. ++.|.+||+..+.. ......+. ....+.+++|+|+++++++++ .++
T Consensus 74 ~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~-~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~ 151 (343)
T 1ri6_A 74 LTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLP-VGVVDVVE-GLDGCHSANISPDNRTLWVPALKQD 151 (343)
T ss_dssp EEEEEEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEE-EEEEEEEC-CCTTBCCCEECTTSSEEEEEEGGGT
T ss_pred eeeccccccCCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCcc-cccccccc-CCCCceEEEECCCCCEEEEecCCCC
Confidence 33444433 4566999999998877765 78999999952221 01122233 334688999999999888887 799
Q ss_pred eEEEEECCC-CeEEE----EeecCCCCCceeeEEECCCCCEEEEec-CCCcEEEEEcCC--cee--EEEec---CC---c
Q 024185 159 NIYVLDAYG-GEKRC----GFSLEPSPNTNTEATFTPDGQYVVSGS-GDGTLHAWNINT--RNE--VACWN---GN---I 222 (271)
Q Consensus 159 ~i~~~d~~~-~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~--~~~--~~~~~---~~---~ 222 (271)
.|++||+.+ ++... .+..+.. ..+..++|+|+++++++++ .++.+.+||+.. ++. ..... .. .
T Consensus 152 ~v~~~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 230 (343)
T 1ri6_A 152 RICLFTVSDDGHLVAQDPAEVTTVEG-AGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDT 230 (343)
T ss_dssp EEEEEEECTTSCEEEEEEEEEECSTT-CCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSC
T ss_pred EEEEEEecCCCceeeecccccccCCC-CCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCcccccc
Confidence 999999987 65432 2222222 3477899999999776554 789999999953 433 22222 11 2
Q ss_pred ceeEEEEEecCCcEEEE-eC--CeEEEEcCC
Q 024185 223 GVVACLKWAPRRAMFVA-AS--SVLSFWIPN 250 (271)
Q Consensus 223 ~~v~~~~~s~~~~~l~~-~~--~~v~iw~~~ 250 (271)
..+..++|+|+|++|+. +. +.+.+||+.
T Consensus 231 ~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~ 261 (343)
T 1ri6_A 231 RWAADIHITPDGRHLYACDRTASLITVFSVS 261 (343)
T ss_dssp CCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred CCccceEECCCCCEEEEEecCCCEEEEEEEc
Confidence 35668999999987764 43 789999998
No 141
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.91 E-value=2.4e-21 Score=164.06 Aligned_cols=233 Identities=12% Similarity=0.124 Sum_probs=174.5
Q ss_pred ecceeEEeeecceeeEEEEe--eccceeeEEEEEcccccceEEeeEEec----CCchhhhhhhhhhc-cCceEEEEEecC
Q 024185 9 PITQALLFARQNIILILLES--LCGIYQCMIIEFFATSKGIRRGLFLSA----CLQLMIALCLVLLT-TALEYGIFVLML 81 (271)
Q Consensus 9 ~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~s~----~~~~~~~~~l~s~~-~dg~i~iwd~~~ 81 (271)
|....++.+..++.+..++. ..+ ..+..+.. ......++|+| +|++ +++++ .+++|.+||..+
T Consensus 188 pdg~~l~v~~~d~~V~v~D~~~~t~----~~~~~i~~-g~~p~~va~sp~~~~dg~~-----l~v~~~~~~~v~v~D~~t 257 (543)
T 1nir_A 188 ASGRYLLVIGRDARIDMIDLWAKEP----TKVAEIKI-GIEARSVESSKFKGYEDRY-----TIAGAYWPPQFAIMDGET 257 (543)
T ss_dssp TTSCEEEEEETTSEEEEEETTSSSC----EEEEEEEC-CSEEEEEEECCSTTCTTTE-----EEEEEEESSEEEEEETTT
T ss_pred CCCCEEEEECCCCeEEEEECcCCCC----cEEEEEec-CCCcceEEeCCCcCCCCCE-----EEEEEccCCeEEEEeccc
Confidence 34455566666788888888 444 23334443 34567899999 9998 55555 589999999999
Q ss_pred cceeEEEecC-------------CcceEEEcCCCCE-EEEEecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCC
Q 024185 82 ASFQGILRLR-------------GRPTVAFDQQGLV-FAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSND 147 (271)
Q Consensus 82 ~~~~~~~~~~-------------~~~~~~~~~~~~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 147 (271)
+++++.+..+ .+..+.++|++.. +++...++.|.+||..+.+. .....+. +...+.++.|+|+
T Consensus 258 ~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~--l~~~~i~-~~~~~~~~~~spd 334 (543)
T 1nir_A 258 LEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDN--LTVTSIG-AAPFLHDGGWDSS 334 (543)
T ss_dssp CCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSS--CEEEEEE-CCSSCCCEEECTT
T ss_pred cccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCc--ceeEEec-cCcCccCceECCC
Confidence 9998888652 2345899998765 45557789999999987664 2222332 4566888999999
Q ss_pred CcEEEEEe-cCCeEEEEECCCCeEEEEeecCCCC--CceeeEEECCC-CCEEEEec-CCCcEEEEEcCC-------ceeE
Q 024185 148 GKSMLLTT-TNNNIYVLDAYGGEKRCGFSLEPSP--NTNTEATFTPD-GQYVVSGS-GDGTLHAWNINT-------RNEV 215 (271)
Q Consensus 148 ~~~l~~~~-~d~~i~~~d~~~~~~~~~~~~~~~~--~~v~~~~~~~~-~~~l~~~~-~dg~i~iwd~~~-------~~~~ 215 (271)
|+++++++ .+++|.+||+.+++++..+.....+ .....+ ++|+ +..++++. .|++|.+||+.+ ++.+
T Consensus 335 g~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v 413 (543)
T 1nir_A 335 HRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKV 413 (543)
T ss_dssp SCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEE
T ss_pred CCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEE
Confidence 99887665 5889999999999998887753221 112222 4677 66666665 579999999998 8999
Q ss_pred EEecCCcceeEEEEEecCCcEEEEeC---------CeEEEEcCCCCCCC
Q 024185 216 ACWNGNIGVVACLKWAPRRAMFVAAS---------SVLSFWIPNPSSNS 255 (271)
Q Consensus 216 ~~~~~~~~~v~~~~~s~~~~~l~~~~---------~~v~iw~~~~~~~~ 255 (271)
+++.+|...+..++++|++++|++++ ++|.+||+++++..
T Consensus 414 ~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~ 462 (543)
T 1nir_A 414 AELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAK 462 (543)
T ss_dssp EEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSC
T ss_pred EEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCC
Confidence 99999988889999999999999974 47999999998765
No 142
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.91 E-value=1.5e-22 Score=177.95 Aligned_cols=198 Identities=10% Similarity=0.019 Sum_probs=156.7
Q ss_pred cceEEeeEEecCCchhhhhhhhhhcc-Cc-----eEEEEEecCcceeEEEecCC--------------------------
Q 024185 45 KGIRRGLFLSACLQLMIALCLVLLTT-AL-----EYGIFVLMLASFQGILRLRG-------------------------- 92 (271)
Q Consensus 45 ~~~v~~~~~s~~~~~~~~~~l~s~~~-dg-----~i~iwd~~~~~~~~~~~~~~-------------------------- 92 (271)
...+..++|||+|+. +++++. |+ .|++||+.+++....+..+.
T Consensus 36 ~~~~~~~~~SpdG~~-----la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSR-----VTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTG 110 (741)
T ss_dssp CCCCEEEEECTTSSE-----EEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEE
T ss_pred CCCCCCceEecCCCE-----EEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccC
Confidence 446888999999998 677776 87 99999999998777665431
Q ss_pred cceEEEcCCCCEEEEEecCCeEEEEeCCCC---CCCcceEEEecCCccceEEEEEcCCCcEEEEEecCCeEEEEECCCCe
Q 024185 93 RPTVAFDQQGLVFAVAMEAGAIKLFDSRSY---DKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGE 169 (271)
Q Consensus 93 ~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~---~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~~~~ 169 (271)
+..++|+|||++|++++. +.|++||+.++ + ...+..|...+.+++|||||++|++++ ++.|++||+.+++
T Consensus 111 v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~-----~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~ 183 (741)
T 2ecf_A 111 IVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAA-----VRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGR 183 (741)
T ss_dssp SCCCEECTTSSEEEEEET-TEEEEEESSSCSTTS-----CCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTE
T ss_pred cceeEECCCCCEEEEEeC-CcEEEEECCCCCcce-----EEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCC
Confidence 456999999999999986 99999999887 4 234556778899999999999999887 4699999999887
Q ss_pred EEEEeecCCCC--------------CceeeEEECCCCCEEEEecCCC---------------------------------
Q 024185 170 KRCGFSLEPSP--------------NTNTEATFTPDGQYVVSGSGDG--------------------------------- 202 (271)
Q Consensus 170 ~~~~~~~~~~~--------------~~v~~~~~~~~~~~l~~~~~dg--------------------------------- 202 (271)
.......+... ..+..+.|+|||++|++++.|+
T Consensus 184 ~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~ 263 (741)
T 2ecf_A 184 QMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQV 263 (741)
T ss_dssp EEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEE
T ss_pred EEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCee
Confidence 66544332221 0136799999999999987665
Q ss_pred cEEEEEcCC-ceeEEEec--CCcceeEEEEEecCCcEEEEeC-------CeEEEEcCCCCCCC
Q 024185 203 TLHAWNINT-RNEVACWN--GNIGVVACLKWAPRRAMFVAAS-------SVLSFWIPNPSSNS 255 (271)
Q Consensus 203 ~i~iwd~~~-~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~-------~~v~iw~~~~~~~~ 255 (271)
.|++||+.+ ++...... .|...+..++| |||++|++++ ..|++||+.+++..
T Consensus 264 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~ 325 (741)
T 2ecf_A 264 KLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQR 325 (741)
T ss_dssp EEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEE
T ss_pred EEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceE
Confidence 789999988 87655443 47788999999 9999888653 45999999887653
No 143
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.90 E-value=2e-21 Score=155.82 Aligned_cols=203 Identities=6% Similarity=-0.032 Sum_probs=158.7
Q ss_pred ceEEeeEEecCCchhhhhhhhhhc------cCceEEEEEecCcceeEEEecCC-cceEEEcCCCCEEEEE-ecCCeEEEE
Q 024185 46 GIRRGLFLSACLQLMIALCLVLLT------TALEYGIFVLMLASFQGILRLRG-RPTVAFDQQGLVFAVA-MEAGAIKLF 117 (271)
Q Consensus 46 ~~v~~~~~s~~~~~~~~~~l~s~~------~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~-~~d~~i~i~ 117 (271)
.....++++|+++.+++ +.. .++.|.+||.++++.+..+.... ...++|+|++++++++ ..++.|.+|
T Consensus 41 ~~~~~~~~s~dg~~l~~----~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~ 116 (353)
T 3vgz_A 41 KGAYEMAYSQQENALWL----ATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAI 116 (353)
T ss_dssp SSEEEEEEETTTTEEEE----EECCCTTTEESEEEEEECTTTCCEEEEEEESSCCCSEEEETTTTEEEEEETTTTEEEEE
T ss_pred cCccceEECCCCCEEEE----EcCCCcCCCCCccEEEEcCCCCeEEEEEecCCCcceEEECCCCCEEEEEecCCCEEEEE
Confidence 45667999999987422 222 27899999999999888887543 4569999999966655 457899999
Q ss_pred eCCCCCCCcceEEEecCCcc---------ceEEEEEcCCCcEEEEEe--cCCeEEEEECCCCeEEEEeecCCCCCceeeE
Q 024185 118 DSRSYDKGPFDTFLVGGDTA---------EVCDIKFSNDGKSMLLTT--TNNNIYVLDAYGGEKRCGFSLEPSPNTNTEA 186 (271)
Q Consensus 118 d~~~~~~~~~~~~~~~~~~~---------~v~~~~~s~~~~~l~~~~--~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~ 186 (271)
|..+++. ...+..+.. .+.+++|+|+++++++++ .++.|.+||..+++....+...... +..+
T Consensus 117 d~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~--~~~~ 190 (353)
T 3vgz_A 117 DAKTGEV----KGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKM--STGL 190 (353)
T ss_dssp ETTTCCE----EEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTT--CCCC
T ss_pred eCCCCee----EEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCc--cceE
Confidence 9998875 333332221 278899999999888776 4789999999999988887644332 6779
Q ss_pred EECCCCCEEEEecCCCcEEEEEcCCceeEEEecC----CcceeEEEEEecCCcEEEEeC---CeEEEEcCCCCCCCcCC
Q 024185 187 TFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNG----NIGVVACLKWAPRRAMFVAAS---SVLSFWIPNPSSNSTDE 258 (271)
Q Consensus 187 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~----~~~~v~~~~~s~~~~~l~~~~---~~v~iw~~~~~~~~~~~ 258 (271)
+|+|+|+++++++.++.|.+||+.+++....+.. +...+.+++|+|++++++.++ +.|.+||+.+++.....
T Consensus 191 ~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~ 269 (353)
T 3vgz_A 191 ALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKV 269 (353)
T ss_dssp EEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEE
T ss_pred EECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEE
Confidence 9999999999999999999999999998887754 455678899999999776664 78999999888765443
No 144
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.90 E-value=1.7e-22 Score=157.71 Aligned_cols=214 Identities=12% Similarity=0.073 Sum_probs=153.9
Q ss_pred eeEEeeecceeeEEEEeec-cceeeEEEEEcccc-cceEEeeEEecCCchhhhhhhhhhc--cCceEEEEEe--cCccee
Q 024185 12 QALLFARQNIILILLESLC-GIYQCMIIEFFATS-KGIRRGLFLSACLQLMIALCLVLLT--TALEYGIFVL--MLASFQ 85 (271)
Q Consensus 12 ~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~~~~~~l~s~~--~dg~i~iwd~--~~~~~~ 85 (271)
..+++ ..++.+..++... +.. ......+ ...+.++.|+|+++. +++++ .++...+|.+ .+++.
T Consensus 54 ~~l~~-~~~~~i~~~d~~~~~~~----~~~~~~~~~~~~~~~~~spdg~~-----l~~~~~~~~~~~~l~~~~~~~~~~- 122 (297)
T 2ojh_A 54 KYLLL-NSEGLLYRLSLAGDPSP----EKVDTGFATICNNDHGISPDGAL-----YAISDKVEFGKSAIYLLPSTGGTP- 122 (297)
T ss_dssp SEEEE-EETTEEEEEESSSCCSC----EECCCTTCCCBCSCCEECTTSSE-----EEEEECTTTSSCEEEEEETTCCCC-
T ss_pred CEEEE-EcCCeEEEEeCCCCCCc----eEeccccccccccceEECCCCCE-----EEEEEeCCCCcceEEEEECCCCce-
Confidence 33444 4477888888766 522 2234444 467888999999998 55555 3355666655 44443
Q ss_pred EEEe-cCCcceEEEcCCCCEEE-EEecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEe-cCCeEEE
Q 024185 86 GILR-LRGRPTVAFDQQGLVFA-VAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTT-TNNNIYV 162 (271)
Q Consensus 86 ~~~~-~~~~~~~~~~~~~~~l~-~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d~~i~~ 162 (271)
..+. ......++|+|++++|+ ++..++.+++|++..... ....+..+...+.+++|+|+++++++++ .++.+++
T Consensus 123 ~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i 199 (297)
T 2ojh_A 123 RLMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSG---VETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQI 199 (297)
T ss_dssp EECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTC---CEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEE
T ss_pred EEeecCCCccceEECCCCCEEEEEECCCCceEEEEEECCCC---cceEcccCCCccccceECCCCCEEEEEecCCCCccE
Confidence 3333 33456689999999887 677889999998643221 1445667778899999999999888776 4888999
Q ss_pred EECC-CCeEEEEeecCCCCCceeeEEECCCCCEEEEecCC-----------CcEEEEEcCCcee--EEEecCCcceeEEE
Q 024185 163 LDAY-GGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGD-----------GTLHAWNINTRNE--VACWNGNIGVVACL 228 (271)
Q Consensus 163 ~d~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----------g~i~iwd~~~~~~--~~~~~~~~~~v~~~ 228 (271)
|++. .+.....+..+.. .+..++|+|+|++|++++.+ +.|++||+.+++. +..+.+|...+.++
T Consensus 200 ~~~~~~~~~~~~~~~~~~--~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~ 277 (297)
T 2ojh_A 200 WRVRVDGSSVERITDSAY--GDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSP 277 (297)
T ss_dssp EEEETTSSCEEECCCCSE--EEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSC
T ss_pred EEECCCCCCcEEEecCCc--ccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccc
Confidence 9876 4555555655443 48889999999999988765 5699999988766 34445778889999
Q ss_pred EEecCCcEEEEeC
Q 024185 229 KWAPRRAMFVAAS 241 (271)
Q Consensus 229 ~~s~~~~~l~~~~ 241 (271)
+|+|++++|++++
T Consensus 278 ~~spdg~~l~~~~ 290 (297)
T 2ojh_A 278 NWSPDGDEFAYVR 290 (297)
T ss_dssp CBCTTSSEEEEEE
T ss_pred eECCCCCEEEEEE
Confidence 9999999998876
No 145
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.90 E-value=3.9e-22 Score=174.34 Aligned_cols=229 Identities=11% Similarity=0.037 Sum_probs=167.0
Q ss_pred eeEEeeecceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecC-----cceeE
Q 024185 12 QALLFARQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLML-----ASFQG 86 (271)
Q Consensus 12 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~-----~~~~~ 86 (271)
..++++ .++.+..++...+ .... +..+...+..+.|||+|+. +++ ..++.|++||+.+ ++..+
T Consensus 93 ~~~~~~-~~~~i~~~d~~~~----~~~~-l~~~~~~~~~~~~SpdG~~-----la~-~~~~~i~v~~~~~~~~~~g~~~~ 160 (706)
T 2z3z_A 93 GLVVLF-TQGGLVGFDMLAR----KVTY-LFDTNEETASLDFSPVGDR-----VAY-VRNHNLYIARGGKLGEGMSRAIA 160 (706)
T ss_dssp TEEEEE-ETTEEEEEETTTT----EEEE-EECCTTCCTTCEECTTSSE-----EEE-EETTEEEEEECBCTTSCCCCCEE
T ss_pred CeEEEE-ECCEEEEEECCCC----ceEE-ccCCcccccCCcCCCCCCE-----EEE-EECCeEEEEecCcccccCCCcEE
Confidence 555555 4688888887665 2222 3345567888999999998 445 4789999999998 77665
Q ss_pred EEecCC----------------cceEEEcCCCCEEEEEe---------------------------------cCCeEEEE
Q 024185 87 ILRLRG----------------RPTVAFDQQGLVFAVAM---------------------------------EAGAIKLF 117 (271)
Q Consensus 87 ~~~~~~----------------~~~~~~~~~~~~l~~~~---------------------------------~d~~i~i~ 117 (271)
....+. +..++|+|||++|++++ .+..|++|
T Consensus 161 ~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~ 240 (706)
T 2z3z_A 161 VTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIY 240 (706)
T ss_dssp SCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEE
T ss_pred eccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEE
Confidence 444332 25699999999999987 34689999
Q ss_pred eCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEecCC-----eEEEEECCCCeEEEEeecCCCC---CceeeEEEC
Q 024185 118 DSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNN-----NIYVLDAYGGEKRCGFSLEPSP---NTNTEATFT 189 (271)
Q Consensus 118 d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~-----~i~~~d~~~~~~~~~~~~~~~~---~~v~~~~~~ 189 (271)
|+.+++. ........|...+.+++|+|||++|++++.++ .|++||+.+++....+...... ..+.++.|+
T Consensus 241 d~~~~~~--~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~s 318 (706)
T 2z3z_A 241 HLATGKT--VYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFL 318 (706)
T ss_dssp ETTTTEE--EECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEEC
T ss_pred ECCCCce--EeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceee
Confidence 9988763 11111124667899999999999999988775 8999999998433333211111 124568999
Q ss_pred C--CCCEEEEecCCCcEEEEEcC-CceeEEEecCCcceeEE-EEEecCCcEEEEeC---C----eEEEEcCCCCCC
Q 024185 190 P--DGQYVVSGSGDGTLHAWNIN-TRNEVACWNGNIGVVAC-LKWAPRRAMFVAAS---S----VLSFWIPNPSSN 254 (271)
Q Consensus 190 ~--~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~~~v~~-~~~s~~~~~l~~~~---~----~v~iw~~~~~~~ 254 (271)
| ||+++++++.++.+++|++. +++.+..+..+...+.. ++|+|+|+.|+.++ + .|..||+.+++.
T Consensus 319 p~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~~ 394 (706)
T 2z3z_A 319 PGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGKT 394 (706)
T ss_dssp TTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCCC
T ss_pred cCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCCc
Confidence 9 99999999999999999886 67777888878777876 79999998776554 3 566777776653
No 146
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.89 E-value=2.1e-22 Score=176.42 Aligned_cols=226 Identities=10% Similarity=-0.001 Sum_probs=160.9
Q ss_pred eEEeeecceeeEEEEeeccceeeEEEEEcccccc---eEEeeEEecCCchhhhhhhhhhccC---------ceEEEEEec
Q 024185 13 ALLFARQNIILILLESLCGIYQCMIIEFFATSKG---IRRGLFLSACLQLMIALCLVLLTTA---------LEYGIFVLM 80 (271)
Q Consensus 13 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~s~~~~~~~~~~l~s~~~d---------g~i~iwd~~ 80 (271)
.+++...++.+..++...+.. ...+.++.. .+..++|||||+. +++++.+ +.+++||++
T Consensus 29 ~~~~~~~dg~i~~~d~~~g~~----~~~~~~~~~~~~~v~~~~~SpDg~~-----l~~~~~~~~~~~~~~~~~i~~~d~~ 99 (723)
T 1xfd_A 29 EFIYREQKGTVRLWNVETNTS----TVLIEGKKIESLRAIRYEISPDREY-----ALFSYNVEPIYQHSYTGYYVLSKIP 99 (723)
T ss_dssp CBCCCCSSSCEEEBCGGGCCC----EEEECTTTTTTTTCSEEEECTTSSE-----EEEEESCCCCSSSCCCSEEEEEESS
T ss_pred cEEEEeCCCCEEEEECCCCcE----EEEeccccccccccceEEECCCCCE-----EEEEecCccceeecceeeEEEEECC
Confidence 355555678888888877732 233555554 3888999999998 5555543 788899999
Q ss_pred CcceeEEEec---C--CcceEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcceEEEecCCccc-----------------
Q 024185 81 LASFQGILRL---R--GRPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAE----------------- 138 (271)
Q Consensus 81 ~~~~~~~~~~---~--~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~----------------- 138 (271)
+++. ..+.. + .+..++|||||++|++++. +.|++||+.+++. ......+...
T Consensus 100 ~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~----~~~~~~~~~~~~~~g~~~~v~~ee~~~ 173 (723)
T 1xfd_A 100 HGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQA----IRVVSTGKEGVIYNGLSDWLYEEEILK 173 (723)
T ss_dssp SCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCC----EEEECCCBTTTEEEEECCHHHHHTTSS
T ss_pred CCce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCce----EEEecCCCCCceECcccceeEEEEecc
Confidence 8876 33332 2 1556999999999999885 7999999998775 2222333332
Q ss_pred -eEEEEEcCCCcEEEEEecCC----------------------------------eEEEEECCCCeEEEEeecCC----C
Q 024185 139 -VCDIKFSNDGKSMLLTTTNN----------------------------------NIYVLDAYGGEKRCGFSLEP----S 179 (271)
Q Consensus 139 -v~~~~~s~~~~~l~~~~~d~----------------------------------~i~~~d~~~~~~~~~~~~~~----~ 179 (271)
+.+++|||||++|++++.++ .|++||+.+++....+..+. .
T Consensus 174 ~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~ 253 (723)
T 1xfd_A 174 THIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMR 253 (723)
T ss_dssp SSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGS
T ss_pred CcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCc
Confidence 37899999999999987543 79999999887655555431 1
Q ss_pred CCceeeEEECCCCCEEEEecC----CCcEEEEEcCCceeEEEecC-CcceeE----EEEEecCCcEEEEe-C---C----
Q 024185 180 PNTNTEATFTPDGQYVVSGSG----DGTLHAWNINTRNEVACWNG-NIGVVA----CLKWAPRRAMFVAA-S---S---- 242 (271)
Q Consensus 180 ~~~v~~~~~~~~~~~l~~~~~----dg~i~iwd~~~~~~~~~~~~-~~~~v~----~~~~s~~~~~l~~~-~---~---- 242 (271)
...+..++|+|||+++++... +..|++||+.+++....+.. +...+. .++|+|||+.|+.. + +
T Consensus 254 ~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~ 333 (723)
T 1xfd_A 254 EYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGK 333 (723)
T ss_dssp SEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSC
T ss_pred cceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcc
Confidence 234788999999998876643 35799999999887766543 334333 78999999977754 2 5
Q ss_pred --eEEEEc-CCCCC
Q 024185 243 --VLSFWI-PNPSS 253 (271)
Q Consensus 243 --~v~iw~-~~~~~ 253 (271)
.|.+|| ..+++
T Consensus 334 ~~~l~~~d~~~~~~ 347 (723)
T 1xfd_A 334 FYHITVSSSQPNSS 347 (723)
T ss_dssp EEEEEEECSSCCSS
T ss_pred eeEEEEEeccCCCC
Confidence 477777 34444
No 147
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.89 E-value=2e-22 Score=177.03 Aligned_cols=226 Identities=9% Similarity=-0.003 Sum_probs=159.8
Q ss_pred ecceeEEeeec-ce-----eeEEEEeeccceeeEEEEEccccc------------------------ceEEeeEEecCCc
Q 024185 9 PITQALLFARQ-NI-----ILILLESLCGIYQCMIIEFFATSK------------------------GIRRGLFLSACLQ 58 (271)
Q Consensus 9 ~~~~~l~~~~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~v~~~~~s~~~~ 58 (271)
|..+.++++.. ++ .+..++...+.. .+.+..+. ..+..++|||+|+
T Consensus 46 pdG~~la~~~~~d~~~~~~~i~~~d~~~g~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~ 121 (741)
T 2ecf_A 46 PDGSRVTFLRGKDSDRNQLDLWSYDIGSGQT----RLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQ 121 (741)
T ss_dssp TTSSEEEEEECCSSCTTEEEEEEEETTTCCE----EEEECGGGTC--------------------CCEESCCCEECTTSS
T ss_pred cCCCEEEEEeccCCCCcccEEEEEECCCCce----eEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCC
Confidence 44456777665 55 788888766622 22233322 2377899999999
Q ss_pred hhhhhhhhhhccCceEEEEEecCcc--eeEEEecC--CcceEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcceEEEecC
Q 024185 59 LMIALCLVLLTTALEYGIFVLMLAS--FQGILRLR--GRPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGG 134 (271)
Q Consensus 59 ~~~~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~--~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~ 134 (271)
. +++++. +.|++||+.++. ....+..+ .+..++|+|||++|++++ ++.|++||+.+++. ......
T Consensus 122 ~-----l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~----~~~~~~ 190 (741)
T 2ecf_A 122 R-----LLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQ----MQLTAD 190 (741)
T ss_dssp E-----EEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEE----EECCCC
T ss_pred E-----EEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCE----EEeccC
Confidence 8 555554 999999998882 23334433 356699999999999988 56999999987653 222222
Q ss_pred Cccc----------------eEEEEEcCCCcEEEEEecCC---------------------------------eEEEEEC
Q 024185 135 DTAE----------------VCDIKFSNDGKSMLLTTTNN---------------------------------NIYVLDA 165 (271)
Q Consensus 135 ~~~~----------------v~~~~~s~~~~~l~~~~~d~---------------------------------~i~~~d~ 165 (271)
+... +..++|||||++|++++.|+ .|++||+
T Consensus 191 ~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~ 270 (741)
T 2ecf_A 191 GSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISP 270 (741)
T ss_dssp CCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECS
T ss_pred CccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEEC
Confidence 2221 47899999999999988765 8999999
Q ss_pred CC-CeEEEEeecCCCCCceeeEEECCCCCEEEEecC-----CCcEEEEEcCCceeEEEecCCcc----eeEEEEEecCCc
Q 024185 166 YG-GEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSG-----DGTLHAWNINTRNEVACWNGNIG----VVACLKWAPRRA 235 (271)
Q Consensus 166 ~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----dg~i~iwd~~~~~~~~~~~~~~~----~v~~~~~s~~~~ 235 (271)
.+ ++.............+..++| |||++|++++. +..|++||+.+++....+..+.. .+..++|+|||+
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~ 349 (741)
T 2ecf_A 271 AEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGS 349 (741)
T ss_dssp STTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSC
T ss_pred CCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCe
Confidence 88 776544332122345889999 99999987653 56799999999988777655443 356899999999
Q ss_pred EEEEeC--CeEEEEcCC
Q 024185 236 MFVAAS--SVLSFWIPN 250 (271)
Q Consensus 236 ~l~~~~--~~v~iw~~~ 250 (271)
++++++ +.+++|.++
T Consensus 350 ~~~~~~~~g~~~l~~~~ 366 (741)
T 2ecf_A 350 ILWSSERTGFQHLYRID 366 (741)
T ss_dssp EEEEECTTSSCEEEEEC
T ss_pred EEEEecCCCccEEEEEc
Confidence 888876 656666554
No 148
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.89 E-value=1e-21 Score=161.98 Aligned_cols=197 Identities=14% Similarity=0.069 Sum_probs=144.3
Q ss_pred ccceEEeeEEecCCchhhhhhhh----hhccCceEEEEEecCc--------ce---eEEEecC--CcceEEEcCC-CCEE
Q 024185 44 SKGIRRGLFLSACLQLMIALCLV----LLTTALEYGIFVLMLA--------SF---QGILRLR--GRPTVAFDQQ-GLVF 105 (271)
Q Consensus 44 ~~~~v~~~~~s~~~~~~~~~~l~----s~~~dg~i~iwd~~~~--------~~---~~~~~~~--~~~~~~~~~~-~~~l 105 (271)
+.+.+.+++|+|++++ |+ +++.|+.|++||++++ +. ...+.+| .+.+++|+|+ +++|
T Consensus 91 ~~~~v~~l~~spdg~~-----lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l 165 (434)
T 2oit_A 91 MKFPIHHLALSCDNLT-----LSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMV 165 (434)
T ss_dssp CSSCEEEEEECTTSCE-----EEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEE
T ss_pred CCCcccEEEEcCCCCE-----EEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEE
Confidence 4567999999999998 66 7899999999999765 22 2334444 4677999998 7899
Q ss_pred EEEecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEecCCeEEEEECCCCeEEEEeecCCC-----C
Q 024185 106 AVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPS-----P 180 (271)
Q Consensus 106 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~-----~ 180 (271)
++++.||+|++||++++.. .....+|...|.+++|+|+|++|++|+.||.|++||.+ ++....+..+.. .
T Consensus 166 as~s~Dg~v~iwD~~~~~~----~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~ 240 (434)
T 2oit_A 166 AVCLADGSIAVLQVTETVK----VCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHP 240 (434)
T ss_dssp EEEETTSCEEEEEESSSEE----EEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSC
T ss_pred EEEECCCeEEEEEcCCCcc----eeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCc
Confidence 9999999999999988753 44456788999999999999999999999999999998 555555544432 1
Q ss_pred CceeeEEECCCCCEEEEe-cCCC------cEEEEEcCCce-----eEEEec-------CCcceeEEEEEecCCcEEEEeC
Q 024185 181 NTNTEATFTPDGQYVVSG-SGDG------TLHAWNINTRN-----EVACWN-------GNIGVVACLKWAPRRAMFVAAS 241 (271)
Q Consensus 181 ~~v~~~~~~~~~~~l~~~-~~dg------~i~iwd~~~~~-----~~~~~~-------~~~~~v~~~~~s~~~~~l~~~~ 241 (271)
..+.+++|++++.++++. +.+| .+++|++++.+ ....+. +...+-..+.+.++.+++++++
T Consensus 241 ~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~s 320 (434)
T 2oit_A 241 VRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAAS 320 (434)
T ss_dssp EEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEEE
T ss_pred eeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEEEec
Confidence 258999999998887543 2333 38999998642 112221 1122223344457878777765
Q ss_pred ---CeEEEEcCC
Q 024185 242 ---SVLSFWIPN 250 (271)
Q Consensus 242 ---~~v~iw~~~ 250 (271)
++|.+....
T Consensus 321 ~~s~dv~vl~~~ 332 (434)
T 2oit_A 321 AASTEVSILARQ 332 (434)
T ss_dssp TTCSBCEEEEEC
T ss_pred CCCCceeEEEec
Confidence 557777643
No 149
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.88 E-value=6.1e-21 Score=173.44 Aligned_cols=191 Identities=11% Similarity=0.015 Sum_probs=154.9
Q ss_pred cceEEeeEEe-cCCchhhhhhhhhhccCceEEEEEecCcceeEEEecC---CcceEEEcCCCCEEEEEecCCeEE-EEeC
Q 024185 45 KGIRRGLFLS-ACLQLMIALCLVLLTTALEYGIFVLMLASFQGILRLR---GRPTVAFDQQGLVFAVAMEAGAIK-LFDS 119 (271)
Q Consensus 45 ~~~v~~~~~s-~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~d~~i~-i~d~ 119 (271)
...+..+.|+ |+|+. +++++ ++.+.+|+..+++... +..+ .+..++|+ ||+.|++++.++.+. +||.
T Consensus 295 ~~~v~~~~~S~pdG~~-----la~~~-~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~ 366 (1045)
T 1k32_A 295 IPSKFAEDFSPLDGDL-----IAFVS-RGQAFIQDVSGTYVLK-VPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDY 366 (1045)
T ss_dssp CGGGGEEEEEECGGGC-----EEEEE-TTEEEEECTTSSBEEE-CSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEET
T ss_pred ccccceeeecCCCCCE-----EEEEE-cCEEEEEcCCCCceEE-ccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEEC
Confidence 3467889999 99998 44444 8899999998777543 3333 24458999 999999998888888 9999
Q ss_pred CCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEecCCeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEec
Q 024185 120 RSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGS 199 (271)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 199 (271)
.+++ ...+.+|...+..++|+|||++|++++.++.|++||+.+++.......+... +.+++|+|||++|++++
T Consensus 367 ~~~~-----~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~--v~~~~~SpDG~~la~~~ 439 (1045)
T 1k32_A 367 RTGK-----AEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAM--ITDFTISDNSRFIAYGF 439 (1045)
T ss_dssp TTCC-----EEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSC--CCCEEECTTSCEEEEEE
T ss_pred CCCC-----ceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCC--ccceEECCCCCeEEEEe
Confidence 8765 3334477788999999999999999999999999999999887776566554 78899999999999887
Q ss_pred CCC----------cEEEEEcCCceeEEEecCCcceeEEEEEecCCcEEEEeC--CeEEEEcCCC
Q 024185 200 GDG----------TLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNP 251 (271)
Q Consensus 200 ~dg----------~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~~v~iw~~~~ 251 (271)
.++ .|++||+.+++ +..+..|...+..++|+|||++|++++ +...+|+...
T Consensus 440 ~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~ 502 (1045)
T 1k32_A 440 PLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVV 502 (1045)
T ss_dssp EECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSS
T ss_pred cCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchhc
Confidence 643 89999999887 677777888889999999999888876 5567777543
No 150
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.88 E-value=5.7e-19 Score=142.29 Aligned_cols=228 Identities=10% Similarity=0.048 Sum_probs=145.7
Q ss_pred eeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEE------ecCC--
Q 024185 21 IILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGIL------RLRG-- 92 (271)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~------~~~~-- 92 (271)
+.+..+......-....+.....+......+++ +++.+ +++...++.+.+|++.....+..+ .+..
T Consensus 75 ~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l----~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~ 148 (361)
T 3scy_A 75 AAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNI----VTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPD 148 (361)
T ss_dssp CEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEE----EEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSC
T ss_pred CcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEE----EEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCC
Confidence 566555543311111222333333444555666 77763 335557899999999754322211 1111
Q ss_pred --------cceEEEcCCCCEEEEEe-cCCeEEEEeCCCCCC----C-cc-----eEEEecCCccceEEEEEcCCCcEEEE
Q 024185 93 --------RPTVAFDQQGLVFAVAM-EAGAIKLFDSRSYDK----G-PF-----DTFLVGGDTAEVCDIKFSNDGKSMLL 153 (271)
Q Consensus 93 --------~~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~----~-~~-----~~~~~~~~~~~v~~~~~s~~~~~l~~ 153 (271)
...++|+|+|+++++++ .++.|.+|++..... . .. .... ..+......++|+|||+++++
T Consensus 149 ~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~spdg~~l~v 227 (361)
T 3scy_A 149 KERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFK-VAPGSGPRHLIFNSDGKFAYL 227 (361)
T ss_dssp TTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEE-CCTTCCEEEEEECTTSSEEEE
T ss_pred ccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeeccccccee-cCCCCCCeEEEEcCCCCEEEE
Confidence 24599999999777665 478999998875431 1 11 1222 233456789999999998888
Q ss_pred Ee-cCCeEEEEECCCCeEE--EEeecCC-CCCceeeEEECCCCCEEEEecCC--CcEEEEEcC--Cce--eEEEecCCcc
Q 024185 154 TT-TNNNIYVLDAYGGEKR--CGFSLEP-SPNTNTEATFTPDGQYVVSGSGD--GTLHAWNIN--TRN--EVACWNGNIG 223 (271)
Q Consensus 154 ~~-~d~~i~~~d~~~~~~~--~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d--g~i~iwd~~--~~~--~~~~~~~~~~ 223 (271)
++ .++.|.+||+.+++.. ..+.... .......++|+|||++|+++..+ +.|.+|++. +++ .+..+.. ..
T Consensus 228 ~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~ 306 (361)
T 3scy_A 228 INEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GI 306 (361)
T ss_dssp EETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SS
T ss_pred EcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CC
Confidence 77 5899999999877642 2222211 11336789999999998776654 899999995 444 4445554 45
Q ss_pred eeEEEEEecCCcEEEEeC---CeEEEE--cCCCCCCCc
Q 024185 224 VVACLKWAPRRAMFVAAS---SVLSFW--IPNPSSNST 256 (271)
Q Consensus 224 ~v~~~~~s~~~~~l~~~~---~~v~iw--~~~~~~~~~ 256 (271)
.+.+++|+|||++|++++ +.+.+| |.+++++..
T Consensus 307 ~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~ 344 (361)
T 3scy_A 307 HPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTD 344 (361)
T ss_dssp CCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEE
T ss_pred CCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEee
Confidence 678999999999888775 779995 555666543
No 151
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.88 E-value=4.4e-21 Score=167.72 Aligned_cols=193 Identities=11% Similarity=0.066 Sum_probs=141.9
Q ss_pred ceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEecC-CcceEEEcCCCCEEEEEecCCeEEEEeCCC---
Q 024185 46 GIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILRLR-GRPTVAFDQQGLVFAVAMEAGAIKLFDSRS--- 121 (271)
Q Consensus 46 ~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~--- 121 (271)
..+..++|||+ +.+ +. +.++.+++||+.+++........ .+..++|+|||++|+++ .++.|++||+.+
T Consensus 82 ~~v~~~~~spd-~~~-----~~-~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~ 153 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLV-----VL-FTQGGLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGE 153 (706)
T ss_dssp CCCEEEEETTT-TEE-----EE-EETTEEEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTS
T ss_pred cCceeEEECCC-CeE-----EE-EECCEEEEEECCCCceEEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccc
Confidence 45888999999 542 22 25699999999988765554432 35669999999999986 589999999988
Q ss_pred --CCCCcceEEEecCCccc--------------eEEEEEcCCCcEEEEEe------------------------------
Q 024185 122 --YDKGPFDTFLVGGDTAE--------------VCDIKFSNDGKSMLLTT------------------------------ 155 (271)
Q Consensus 122 --~~~~~~~~~~~~~~~~~--------------v~~~~~s~~~~~l~~~~------------------------------ 155 (271)
++. ......+... +.++.|||||++|++++
T Consensus 154 ~~g~~----~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g 229 (706)
T 2z3z_A 154 GMSRA----IAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAG 229 (706)
T ss_dssp CCCCC----EESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTT
T ss_pred cCCCc----EEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCC
Confidence 664 2222222222 48899999999999987
Q ss_pred ---cCCeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEecCCC-----cEEEEEcCCceeEEEec--CCcc--
Q 024185 156 ---TNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDG-----TLHAWNINTRNEVACWN--GNIG-- 223 (271)
Q Consensus 156 ---~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~~~~~~~~--~~~~-- 223 (271)
.+..|++||+.+++.............+.+++|+|||+++++++.++ .|++||+.+++....+. .+..
T Consensus 230 ~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~ 309 (706)
T 2z3z_A 230 TPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYV 309 (706)
T ss_dssp SCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCC
T ss_pred CCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeE
Confidence 34689999999988655443322334588999999999999887665 89999999984433332 1222
Q ss_pred -eeEEEEEec--CCcEEEEeC--CeEEEEcCC
Q 024185 224 -VVACLKWAP--RRAMFVAAS--SVLSFWIPN 250 (271)
Q Consensus 224 -~v~~~~~s~--~~~~l~~~~--~~v~iw~~~ 250 (271)
.+.+++|+| ||+++++++ +.+++|+++
T Consensus 310 ~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~ 341 (706)
T 2z3z_A 310 EPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYD 341 (706)
T ss_dssp CCCSCCEECTTCSSEEEEEECTTSSCEEEEEE
T ss_pred CccCCceeecCCCCEEEEEEccCCccEEEEEE
Confidence 246789999 999988886 668888765
No 152
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.88 E-value=3.5e-21 Score=164.85 Aligned_cols=221 Identities=9% Similarity=-0.006 Sum_probs=155.3
Q ss_pred eecceeEEeeec-ceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhcc---CceEEEEEecC--
Q 024185 8 LPITQALLFARQ-NIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTT---ALEYGIFVLML-- 81 (271)
Q Consensus 8 ~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~---dg~i~iwd~~~-- 81 (271)
.|..+.++++.. ++.+.++....+ ...+...++...+..++|+|+ +. +++++. +...++|.++.
T Consensus 30 ~~DG~~la~~s~~~g~~~lw~~~~g----~~~~lt~~~~~~~~~~~~spd-~~-----l~~~~~~~g~~~~~l~~~~~~~ 99 (582)
T 3o4h_A 30 VVDGDKLLVVGFSEGSVNAYLYDGG----ETVKLNREPINSVLDPHYGVG-RV-----ILVRDVSKGAEQHALFKVNTSR 99 (582)
T ss_dssp EETTTEEEEEEEETTEEEEEEEETT----EEEECCSSCCSEECEECTTCS-EE-----EEEEECSTTSCCEEEEEEETTS
T ss_pred CCCCCeEEEEEccCCceeEEEEcCC----CcEeeecccccccccccCCCC-eE-----EEEeccCCCCcceEEEEEeccC
Confidence 355677777765 777777775333 222333334468889999999 55 344443 55566766543
Q ss_pred -cceeEEEecCCcceEEEcCCCCE-EEEEecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEecC--
Q 024185 82 -ASFQGILRLRGRPTVAFDQQGLV-FAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTN-- 157 (271)
Q Consensus 82 -~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-- 157 (271)
+........+.....+|+|+++. +++.+.++.+.+||+.+++. . .+..+.. .+++|||||+++++++.+
T Consensus 100 ~g~~~~l~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~----~-~l~~~~~--~~~~~spDG~~la~~~~~~~ 172 (582)
T 3o4h_A 100 PGEEQRLEAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGL----R-ELARLPG--FGFVSDIRGDLIAGLGFFGG 172 (582)
T ss_dssp TTCCEECTTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEE----E-EEEEESS--CEEEEEEETTEEEEEEEEET
T ss_pred CCccccccCCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcE----E-EeecCCC--ceEEECCCCCEEEEEEEcCC
Confidence 33332223334556789998863 33344455566999988763 2 2222223 889999999999988876
Q ss_pred --CeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEecCCC--cEEEEEcCCceeEEEecCCcceeEEEE----
Q 024185 158 --NNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDG--TLHAWNINTRNEVACWNGNIGVVACLK---- 229 (271)
Q Consensus 158 --~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~~~~~~v~~~~---- 229 (271)
+.|++||+.+++.. .+..+.. .+..++|+|||++|+++..++ .|++||+.+++.. .+.+|...+..++
T Consensus 173 ~~~~i~~~d~~~g~~~-~l~~~~~--~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~ 248 (582)
T 3o4h_A 173 GRVSLFTSNLSSGGLR-VFDSGEG--SFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAI 248 (582)
T ss_dssp TEEEEEEEETTTCCCE-EECCSSC--EEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEE
T ss_pred CCeEEEEEcCCCCCce-EeecCCC--ccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccc
Confidence 78999999888754 4544443 488999999999999888888 8999999998887 7777777777777
Q ss_pred ----EecCCcEEEEeC--CeEEEEcC
Q 024185 230 ----WAPRRAMFVAAS--SVLSFWIP 249 (271)
Q Consensus 230 ----~s~~~~~l~~~~--~~v~iw~~ 249 (271)
|+|||.++++++ +.+++|++
T Consensus 249 ~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 249 TWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp EEEEECTTSCEEEEEEETTEEEEEET
T ss_pred cceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 999998777776 88999999
No 153
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.87 E-value=2.8e-20 Score=148.05 Aligned_cols=185 Identities=11% Similarity=0.063 Sum_probs=143.1
Q ss_pred hhhhccCceEEEEEecCcceeEEEecCC----cceEEEcCCCCEEEEE-ecCCeEEEEeCCCCCCCcceEEEecC---Cc
Q 024185 65 LVLLTTALEYGIFVLMLASFQGILRLRG----RPTVAFDQQGLVFAVA-MEAGAIKLFDSRSYDKGPFDTFLVGG---DT 136 (271)
Q Consensus 65 l~s~~~dg~i~iwd~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~---~~ 136 (271)
+++++.++.|++||..+++.+..+.... ...++|+|++++++++ ..++.|.+||+.+++. ........ +.
T Consensus 4 ~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~--~~~~~~~~~~~~~ 81 (337)
T 1pby_B 4 ILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGET--LGRIDLSTPEERV 81 (337)
T ss_dssp EEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCE--EEEEECCBTTEEE
T ss_pred EEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCe--EeeEEcCCccccc
Confidence 6688899999999999999888886443 5669999999876554 5578999999988774 22222221 12
Q ss_pred cceEEEEEcCCCcEEEEEe------------cCCeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEecCCCcE
Q 024185 137 AEVCDIKFSNDGKSMLLTT------------TNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTL 204 (271)
Q Consensus 137 ~~v~~~~~s~~~~~l~~~~------------~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i 204 (271)
..+.+++|+|+|+++++++ .++.|.+||+.+++.+..+.... .+.+++|+|+|++++++ ++.|
T Consensus 82 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~---~~~~~~~s~dg~~l~~~--~~~i 156 (337)
T 1pby_B 82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPR---QITMLAWARDGSKLYGL--GRDL 156 (337)
T ss_dssp ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCS---SCCCEEECTTSSCEEEE--SSSE
T ss_pred ccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCC---CcceeEECCCCCEEEEe--CCeE
Confidence 2677899999999998886 57999999999998887776533 26778999999988887 5789
Q ss_pred EEEEcCCceeEEEecCCc--------------------------------------------------------------
Q 024185 205 HAWNINTRNEVACWNGNI-------------------------------------------------------------- 222 (271)
Q Consensus 205 ~iwd~~~~~~~~~~~~~~-------------------------------------------------------------- 222 (271)
.+||+.+++....+..+.
T Consensus 157 ~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~ 236 (337)
T 1pby_B 157 HVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREV 236 (337)
T ss_dssp EEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEE
T ss_pred EEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeec
Confidence 999998887765543221
Q ss_pred ----ceeEEEEEecCCcEEEEeCCeEEEEcCCCCCCCc
Q 024185 223 ----GVVACLKWAPRRAMFVAASSVLSFWIPNPSSNST 256 (271)
Q Consensus 223 ----~~v~~~~~s~~~~~l~~~~~~v~iw~~~~~~~~~ 256 (271)
..+.+++|+|||++++++++.|.+||+.+++...
T Consensus 237 ~~~~~~~~~~~~s~dg~~l~~~~~~v~~~d~~~~~~~~ 274 (337)
T 1pby_B 237 RIMDVFYFSTAVNPAKTRAFGAYNVLESFDLEKNASIK 274 (337)
T ss_dssp EECSSCEEEEEECTTSSEEEEEESEEEEEETTTTEEEE
T ss_pred CCCCCceeeEEECCCCCEEEEeCCeEEEEECCCCcCcc
Confidence 1234689999999998888999999998876543
No 154
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.87 E-value=9e-20 Score=147.33 Aligned_cols=202 Identities=11% Similarity=0.030 Sum_probs=139.3
Q ss_pred EEeeEEecCCchhhhhhhhhhc-------------cCceEEEEEec-CcceeEEEe------cCCcceEEEcCCCCEEEE
Q 024185 48 RRGLFLSACLQLMIALCLVLLT-------------TALEYGIFVLM-LASFQGILR------LRGRPTVAFDQQGLVFAV 107 (271)
Q Consensus 48 v~~~~~s~~~~~~~~~~l~s~~-------------~dg~i~iwd~~-~~~~~~~~~------~~~~~~~~~~~~~~~l~~ 107 (271)
...++++|+|+.++ ++++. .+|.+.+|+++ +++....+. ......++|+|||+++++
T Consensus 85 ~~~~~~spdg~~l~---~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~ 161 (365)
T 1jof_A 85 PRANDADTNTRAIF---LLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYS 161 (365)
T ss_dssp GGGGCTTSCCEEEE---EEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEE
T ss_pred CccEEECCCCCEEE---EEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEE
Confidence 45588999998411 22332 68999999997 465544443 123556999999998887
Q ss_pred Eec-CCeEEEEeCC-CCCCCcceEEEecCCccceEEEEEcCCCcEEEEEec-CCeEEEEECC--CCeEEE---EeecCC-
Q 024185 108 AME-AGAIKLFDSR-SYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTT-NNNIYVLDAY--GGEKRC---GFSLEP- 178 (271)
Q Consensus 108 ~~~-d~~i~i~d~~-~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-d~~i~~~d~~--~~~~~~---~~~~~~- 178 (271)
+.. ++.|++||+. +++...........|...+..++|+|||+++++++. ++.+.+|++. +++... .+....
T Consensus 162 ~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~ 241 (365)
T 1jof_A 162 ADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPP 241 (365)
T ss_dssp EETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCT
T ss_pred EcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCC
Confidence 754 6799999998 565311111122223567899999999999988775 7899999765 565421 222111
Q ss_pred ---CCC-------ceeeEE-ECCCCCEEEEecCC-C-----cEEEEEcC-CceeEE---EecCCcceeEEEEEec---CC
Q 024185 179 ---SPN-------TNTEAT-FTPDGQYVVSGSGD-G-----TLHAWNIN-TRNEVA---CWNGNIGVVACLKWAP---RR 234 (271)
Q Consensus 179 ---~~~-------~v~~~~-~~~~~~~l~~~~~d-g-----~i~iwd~~-~~~~~~---~~~~~~~~v~~~~~s~---~~ 234 (271)
... .+..++ |+|||++|++++.+ + .|.+|++. +++... ....+...+..++|+| ||
T Consensus 242 ~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg 321 (365)
T 1jof_A 242 GIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSD 321 (365)
T ss_dssp TCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCT
T ss_pred CcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCC
Confidence 101 377899 99999998877643 2 89999996 566543 2333445567899999 89
Q ss_pred cEEEEeC---CeEEEEcCCCC
Q 024185 235 AMFVAAS---SVLSFWIPNPS 252 (271)
Q Consensus 235 ~~l~~~~---~~v~iw~~~~~ 252 (271)
++|++++ +.|.+|+++..
T Consensus 322 ~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 322 EWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp TEEEEECSSSCEEEEEEEETT
T ss_pred CEEEEEEcCCCeEEEEEEchh
Confidence 9998886 67999998765
No 155
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.87 E-value=9.2e-21 Score=151.66 Aligned_cols=192 Identities=12% Similarity=0.063 Sum_probs=144.7
Q ss_pred eeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEecCC---cceEEEcCCCCEEEEE-ecCCeEEEEeCCCCCCC
Q 024185 50 GLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILRLRG---RPTVAFDQQGLVFAVA-MEAGAIKLFDSRSYDKG 125 (271)
Q Consensus 50 ~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~ 125 (271)
.+++++++.. +++++.++.|++||..+++.+..+..+. ...++|+|++++++++ ..++.|.+||+.+++.
T Consensus 4 g~~~~~~~~~-----~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~- 77 (349)
T 1jmx_B 4 GPALKAGHEY-----MIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKN- 77 (349)
T ss_dssp CCCCCTTCEE-----EEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEE-
T ss_pred cccccCCCEE-----EEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcE-
Confidence 3567777777 7788999999999999999888887554 5569999999876554 5688999999988764
Q ss_pred cceEEEec-CC-----ccceEEEEEcCCCcEEEEEecC------------CeEEEEECCCCeEE---EEeecCCCCCcee
Q 024185 126 PFDTFLVG-GD-----TAEVCDIKFSNDGKSMLLTTTN------------NNIYVLDAYGGEKR---CGFSLEPSPNTNT 184 (271)
Q Consensus 126 ~~~~~~~~-~~-----~~~v~~~~~s~~~~~l~~~~~d------------~~i~~~d~~~~~~~---~~~~~~~~~~~v~ 184 (271)
...+. .+ ...+..++|+|||+++++++.+ +.|.+||+.+++.. ..+..+ ..+.
T Consensus 78 ---~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~---~~~~ 151 (349)
T 1jmx_B 78 ---TFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMP---RQVY 151 (349)
T ss_dssp ---EEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECC---SSCC
T ss_pred ---EEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCC---Cccc
Confidence 22222 22 2337889999999999998865 89999999885433 333322 2377
Q ss_pred eEEECCCCCEEEEecCCCcEEEEEcCCceeEEEecCCc------------------------------------------
Q 024185 185 EATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNI------------------------------------------ 222 (271)
Q Consensus 185 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~------------------------------------------ 222 (271)
+++|+|||+ +++++. .|.+||+.+++.+..+..+.
T Consensus 152 ~~~~s~dg~-l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 228 (349)
T 1jmx_B 152 LMRAADDGS-LYVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPAT 228 (349)
T ss_dssp CEEECTTSC-EEEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CC
T ss_pred ceeECCCCc-EEEccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccc
Confidence 899999999 555543 49999999988877664331
Q ss_pred --------------------------ceeEEEEEec-CCcEEEEeCCeEEEEcCCCCCCCc
Q 024185 223 --------------------------GVVACLKWAP-RRAMFVAASSVLSFWIPNPSSNST 256 (271)
Q Consensus 223 --------------------------~~v~~~~~s~-~~~~l~~~~~~v~iw~~~~~~~~~ 256 (271)
..+.+++|+| ++++++++.+.|.+||+.+++...
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~v~~~d~~~~~~~~ 289 (349)
T 1jmx_B 229 ADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVLNRLAKYDLKQRKLIK 289 (349)
T ss_dssp CEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEEESEEEEEETTTTEEEE
T ss_pred cccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEEcCeEEEEECccCeEEE
Confidence 1245677889 999888888889999999877543
No 156
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.87 E-value=2.7e-20 Score=159.35 Aligned_cols=183 Identities=13% Similarity=0.056 Sum_probs=143.6
Q ss_pred eeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEecCCcceEEEcCCCCEEEEEecC----CeEEEEeCCCCCCC
Q 024185 50 GLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILRLRGRPTVAFDQQGLVFAVAMEA----GAIKLFDSRSYDKG 125 (271)
Q Consensus 50 ~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d----~~i~i~d~~~~~~~ 125 (271)
..+++|+++.++ +++++. +.+.+||+++++.......+. ..++|+|||++|++++.+ +.|++||+.+++.
T Consensus 114 ~~~~s~dg~~~~---~~s~~~-~~~~l~d~~~g~~~~l~~~~~-~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~- 187 (582)
T 3o4h_A 114 ILSGVDTGEAVV---FTGATE-DRVALYALDGGGLRELARLPG-FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGL- 187 (582)
T ss_dssp EEEEEECSSCEE---EEEECS-SCEEEEEEETTEEEEEEEESS-CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCC-
T ss_pred eeeeCCCCCeEE---EEecCC-CCceEEEccCCcEEEeecCCC-ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCc-
Confidence 568899987532 234444 445599999988766665555 779999999999988766 7899999988874
Q ss_pred cceEEEecCCccceEEEEEcCCCcEEEEEecCC--eEEEEECCCCeEEEEeecCCCCCceeeEE--------ECCCCCEE
Q 024185 126 PFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNN--NIYVLDAYGGEKRCGFSLEPSPNTNTEAT--------FTPDGQYV 195 (271)
Q Consensus 126 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~--~i~~~d~~~~~~~~~~~~~~~~~~v~~~~--------~~~~~~~l 195 (271)
..+..|.+.+..++|||||+.|+++..++ .|++||+.+++.. .+..+... +..+. |+|||.++
T Consensus 188 ----~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~spdg~~~ 260 (582)
T 3o4h_A 188 ----RVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKD--FSSYRPTAITWLGYLPDGRLA 260 (582)
T ss_dssp ----EEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSH--HHHHCCSEEEEEEECTTSCEE
T ss_pred ----eEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcC--hhhhhhccccceeEcCCCcEE
Confidence 35667888899999999999999888888 8999999988876 55544432 55566 99999988
Q ss_pred EEecCCCcEEEEEcCCceeEEEecCCcceeEEEEEecCCcEEEEeC-----CeEEEEcCCC
Q 024185 196 VSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS-----SVLSFWIPNP 251 (271)
Q Consensus 196 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-----~~v~iw~~~~ 251 (271)
++++.++.+++|++ ++... .+.+.+.+++|+ +++++++++ ..+.+||..+
T Consensus 261 ~~~~~~g~~~l~~~--g~~~~---~~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~~~ 315 (582)
T 3o4h_A 261 VVARREGRSAVFID--GERVE---APQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLPSGE 315 (582)
T ss_dssp EEEEETTEEEEEET--TEEEC---CCSSEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCC
T ss_pred EEEEcCCcEEEEEE--CCeec---cCCCceEEEEec-CCEEEEEEcCCCCCCeEEEEcCCC
Confidence 99999999999999 66554 234678999999 999888775 3477887654
No 157
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.87 E-value=5.6e-19 Score=141.52 Aligned_cols=201 Identities=14% Similarity=0.131 Sum_probs=136.6
Q ss_pred ccceEEeeEEecCCchhhhhhhhhhc--cCceEEEEEecCcce--eEEEe--cCCcceEEEcCCCCEEEEEe-cCCeEEE
Q 024185 44 SKGIRRGLFLSACLQLMIALCLVLLT--TALEYGIFVLMLASF--QGILR--LRGRPTVAFDQQGLVFAVAM-EAGAIKL 116 (271)
Q Consensus 44 ~~~~v~~~~~s~~~~~~~~~~l~s~~--~dg~i~iwd~~~~~~--~~~~~--~~~~~~~~~~~~~~~l~~~~-~d~~i~i 116 (271)
+......++++|+|+. ++++. .++.|++||+++++. +..+. ......++|+|+|++|++++ .++.+.+
T Consensus 38 ~~~~p~~~a~spdg~l-----~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v 112 (347)
T 3hfq_A 38 ATQNPTYLALSAKDCL-----YSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEV 112 (347)
T ss_dssp ECSCCCCEEECTTCEE-----EEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEE
T ss_pred ccCCcceEEEccCCeE-----EEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEE
Confidence 3455667999999993 33443 379999999987663 33322 23456699999999988887 6789999
Q ss_pred EeCCC-CCCCcceEEEecC-------CccceEEEEEcCCCcEEEEEecCCeEEEEECC-CCeEEE--EeecCCCCCceee
Q 024185 117 FDSRS-YDKGPFDTFLVGG-------DTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAY-GGEKRC--GFSLEPSPNTNTE 185 (271)
Q Consensus 117 ~d~~~-~~~~~~~~~~~~~-------~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~-~~~~~~--~~~~~~~~~~v~~ 185 (271)
|++.. +...........+ +...+.+++|+|+|+.+++...++.|++||+. +++... .+..... .....
T Consensus 113 ~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g-~~p~~ 191 (347)
T 3hfq_A 113 MKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAG-FGPRH 191 (347)
T ss_dssp EEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTT-CCEEE
T ss_pred EEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCC-CCCce
Confidence 99963 3321111111111 12348899999999955555668899999998 554332 2222222 24678
Q ss_pred EEECCCCCEEEE-ecCCCcEEEEEcCC--cee--EEEecCCc------ceeEEEEEecCCcEEEEeC---CeEEEEcCC
Q 024185 186 ATFTPDGQYVVS-GSGDGTLHAWNINT--RNE--VACWNGNI------GVVACLKWAPRRAMFVAAS---SVLSFWIPN 250 (271)
Q Consensus 186 ~~~~~~~~~l~~-~~~dg~i~iwd~~~--~~~--~~~~~~~~------~~v~~~~~s~~~~~l~~~~---~~v~iw~~~ 250 (271)
++|+|||+++++ ...++.+.+|++.. ++. +..+.... ..+..++|+|||++|+.++ +.|.+|++.
T Consensus 192 ~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~ 270 (347)
T 3hfq_A 192 LVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVT 270 (347)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEEC
T ss_pred EEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEEC
Confidence 999999997666 45678999999874 443 22332222 4588999999999775443 789999986
No 158
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.87 E-value=1.1e-21 Score=171.77 Aligned_cols=195 Identities=11% Similarity=0.051 Sum_probs=145.4
Q ss_pred eeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEecC-----CcceEEEcCCCCEEEEEec---------CCeEE
Q 024185 50 GLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILRLR-----GRPTVAFDQQGLVFAVAME---------AGAIK 115 (271)
Q Consensus 50 ~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~~~---------d~~i~ 115 (271)
.+.|+|++++ + ..+.|+.|++||+.+++....+..+ .+..++|||||++|++++. ++.|+
T Consensus 20 ~~~~s~dg~~-----~-~~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~ 93 (719)
T 1z68_A 20 FPNWISGQEY-----L-HQSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYY 93 (719)
T ss_dssp CCEESSSSEE-----E-EECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEE
T ss_pred ccEECCCCeE-----E-EEcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEE
Confidence 5789999965 3 3346999999999999987777655 2667999999999998876 68999
Q ss_pred EEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEecCCeEEEEECCCCeEEEEee-cCCCC--------------
Q 024185 116 LFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFS-LEPSP-------------- 180 (271)
Q Consensus 116 i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~-~~~~~-------------- 180 (271)
+||+.+++. .....+ ...+..++|||||+.|+++. ++.|++||+.+++..+... .+...
T Consensus 94 ~~d~~~g~~--~~~~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~ 167 (719)
T 1z68_A 94 IYDLSNGEF--VRGNEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEM 167 (719)
T ss_dssp EEETTTTEE--CCSSCC---CSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHT
T ss_pred EEECCCCcc--ccceec---CcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeec
Confidence 999988763 000222 24688899999999999886 7899999998887654321 11110
Q ss_pred -CceeeEEECCCCCEEEEecCCC----------------------------------cEEEEEcCCceeE---E-----E
Q 024185 181 -NTNTEATFTPDGQYVVSGSGDG----------------------------------TLHAWNINTRNEV---A-----C 217 (271)
Q Consensus 181 -~~v~~~~~~~~~~~l~~~~~dg----------------------------------~i~iwd~~~~~~~---~-----~ 217 (271)
....+++|+|||++|++++.|. .|++||+.+++.. . .
T Consensus 168 ~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~ 247 (719)
T 1z68_A 168 LATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAM 247 (719)
T ss_dssp TCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHH
T ss_pred ccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCcc
Confidence 0124799999999999887542 7889999988753 2 1
Q ss_pred ecCCcceeEEEEEecCCcEEEEeC------CeEEEEc----CCCCCCCc
Q 024185 218 WNGNIGVVACLKWAPRRAMFVAAS------SVLSFWI----PNPSSNST 256 (271)
Q Consensus 218 ~~~~~~~v~~~~~s~~~~~l~~~~------~~v~iw~----~~~~~~~~ 256 (271)
+.+|...+.+++|+||++++++.. ..|.+|| ..+++...
T Consensus 248 ~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~ 296 (719)
T 1z68_A 248 IASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPK 296 (719)
T ss_dssp HHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCG
T ss_pred CCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEE
Confidence 346788899999999988777743 2388999 77765543
No 159
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.87 E-value=1e-21 Score=172.12 Aligned_cols=225 Identities=13% Similarity=0.092 Sum_probs=158.6
Q ss_pred eEEeeecceeeEEEEeeccceeeEEEEEcccccc---eEEeeEEecCCchhhhhhhhhhcc---------CceEEEEEec
Q 024185 13 ALLFARQNIILILLESLCGIYQCMIIEFFATSKG---IRRGLFLSACLQLMIALCLVLLTT---------ALEYGIFVLM 80 (271)
Q Consensus 13 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~s~~~~~~~~~~l~s~~~---------dg~i~iwd~~ 80 (271)
.+++...++.+..++...+. ....+.++.. .+..++|||||+. +++++. ++.|++||++
T Consensus 28 ~~~~~~~d~~i~~~~~~~g~----~~~~~~~~~~~~~~~~~~~~SpDg~~-----la~~~~~~~~~~~s~~~~i~~~d~~ 98 (719)
T 1z68_A 28 EYLHQSADNNIVLYNIETGQ----SYTILSNRTMKSVNASNYGLSPDRQF-----VYLESDYSKLWRYSYTATYYIYDLS 98 (719)
T ss_dssp EEEEECTTSCEEEEESSSCC----EEEEECHHHHHTTTCSEEEECTTSSE-----EEEEEEEEECSSSCEEEEEEEEETT
T ss_pred eEEEEcCCCCEEEEEcCCCc----EEEEEccccccccceeeEEECCCCCe-----EEEEecCceeEEeecceEEEEEECC
Confidence 45666668889988887763 2333544443 3788999999998 555554 7999999999
Q ss_pred Cccee--EEEecCCcceEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcceEEEecCCccce-----------------EE
Q 024185 81 LASFQ--GILRLRGRPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEV-----------------CD 141 (271)
Q Consensus 81 ~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v-----------------~~ 141 (271)
+++.+ ..+. ..+..++|||||+.|+++. ++.|++||+.+++. ......++...+ .+
T Consensus 99 ~g~~~~~~~l~-~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~---~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~ 173 (719)
T 1z68_A 99 NGEFVRGNELP-RPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPP---FQITFNGRENKIFNGIPDWVYEEEMLATKYA 173 (719)
T ss_dssp TTEECCSSCCC-SSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCC---EECCCCCBTTTEEESSCCHHHHHHTTCSSCC
T ss_pred CCccccceecC-cccccceECCCCCEEEEEE-CCeEEEEeCCCCCc---EEEecCCCcCCeEcccccceeeeecccCccc
Confidence 88762 2222 3466699999999999986 78999999988764 111122332222 48
Q ss_pred EEEcCCCcEEEEEecCC----------------------------------eEEEEECCCCeEE--EEe------ecCCC
Q 024185 142 IKFSNDGKSMLLTTTNN----------------------------------NIYVLDAYGGEKR--CGF------SLEPS 179 (271)
Q Consensus 142 ~~~s~~~~~l~~~~~d~----------------------------------~i~~~d~~~~~~~--~~~------~~~~~ 179 (271)
++|||||++|++++.|. .|++||+.+++.. ..+ ..+.
T Consensus 174 ~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~- 252 (719)
T 1z68_A 174 LWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSD- 252 (719)
T ss_dssp EEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSC-
T ss_pred EEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCc-
Confidence 99999999999987652 7899999887642 111 1233
Q ss_pred CCceeeEEECCCCCEEEEecCC----CcEEEEE----cCCceeEEEe----cCCcceeE-----EEEEecCCcEEEE--e
Q 024185 180 PNTNTEATFTPDGQYVVSGSGD----GTLHAWN----INTRNEVACW----NGNIGVVA-----CLKWAPRRAMFVA--A 240 (271)
Q Consensus 180 ~~~v~~~~~~~~~~~l~~~~~d----g~i~iwd----~~~~~~~~~~----~~~~~~v~-----~~~~s~~~~~l~~--~ 240 (271)
..+..++|+||++++++.... ..|.+|| ..+++....+ .+|...+. .+.|+|||+.++. +
T Consensus 253 -~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~ 331 (719)
T 1z68_A 253 -YYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFS 331 (719)
T ss_dssp -EEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEE
T ss_pred -ceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEE
Confidence 348899999998877764332 3488999 8777765544 46777776 8899999996554 3
Q ss_pred C----CeEEEEcCCCCC
Q 024185 241 S----SVLSFWIPNPSS 253 (271)
Q Consensus 241 ~----~~v~iw~~~~~~ 253 (271)
. ..|.+||+.+++
T Consensus 332 ~~~g~~~l~~~~~~~~~ 348 (719)
T 1z68_A 332 DKDGYKHIHYIKDTVEN 348 (719)
T ss_dssp CTTSCEEEEEESSCSTT
T ss_pred ccCCceEEEEEECCCCc
Confidence 2 358888887765
No 160
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.86 E-value=2.7e-20 Score=169.21 Aligned_cols=195 Identities=8% Similarity=0.028 Sum_probs=157.1
Q ss_pred cccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEecC-------------CcceEEEc-CCCCEEE
Q 024185 41 FATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILRLR-------------GRPTVAFD-QQGLVFA 106 (271)
Q Consensus 41 ~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-------------~~~~~~~~-~~~~~l~ 106 (271)
+..+.. +...+|+|+|+. ++.+ .++.|++||++..+ +..+..+ .+..++|+ |||++|+
T Consensus 241 l~~~~~-~~~~~~SpDG~~-----la~~-~~~~i~~~d~~~~~-l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la 312 (1045)
T 1k32_A 241 HTSFTD-YYPRHLNTDGRR-----ILFS-KGGSIYIFNPDTEK-IEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIA 312 (1045)
T ss_dssp CCCCCS-SCEEEEEESSSC-----EEEE-ETTEEEEECTTTCC-EEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEE
T ss_pred ecCCCC-cceeeEcCCCCE-----EEEE-eCCEEEEecCCceE-eeeeccCcccccccccccccccceeeecCCCCCEEE
Confidence 334433 455799999997 4444 58999999995443 3355442 35679999 9999999
Q ss_pred EEecCCeEEEEeCCCCCCCcceEEEecCCcc-ceEEEEEcCCCcEEEEEecCCeEE-EEECCCCeEEEEeecCCCCCcee
Q 024185 107 VAMEAGAIKLFDSRSYDKGPFDTFLVGGDTA-EVCDIKFSNDGKSMLLTTTNNNIY-VLDAYGGEKRCGFSLEPSPNTNT 184 (271)
Q Consensus 107 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~-~v~~~~~s~~~~~l~~~~~d~~i~-~~d~~~~~~~~~~~~~~~~~~v~ 184 (271)
+++ ++.+++|+..+++ ...+..|.. .+..++|+ ||+.+++++.++.+. +||+.+++... +..+. ..+.
T Consensus 313 ~~~-~~~i~~~~~~~~~-----~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~-l~~~~--~~~~ 382 (1045)
T 1k32_A 313 FVS-RGQAFIQDVSGTY-----VLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEK-FEENL--GNVF 382 (1045)
T ss_dssp EEE-TTEEEEECTTSSB-----EEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEE-CCCCC--CSEE
T ss_pred EEE-cCEEEEEcCCCCc-----eEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceE-ecCCc--ccee
Confidence 888 7899999998765 334566777 89999999 999999999888899 99998776543 33443 3488
Q ss_pred eEEECCCCCEEEEecCCCcEEEEEcCCceeEEEecCCcceeEEEEEecCCcEEEEeC--C----------eEEEEcCCCC
Q 024185 185 EATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--S----------VLSFWIPNPS 252 (271)
Q Consensus 185 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~----------~v~iw~~~~~ 252 (271)
.++|+|||++|++++.++.|++||+.+++......+|...+.+++|+|||++|++++ + .|++||+.++
T Consensus 383 ~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g 462 (1045)
T 1k32_A 383 AMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGR 462 (1045)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTT
T ss_pred eeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCC
Confidence 999999999999999999999999999998888878988999999999999998775 4 7999999887
Q ss_pred C
Q 024185 253 S 253 (271)
Q Consensus 253 ~ 253 (271)
+
T Consensus 463 ~ 463 (1045)
T 1k32_A 463 K 463 (1045)
T ss_dssp E
T ss_pred c
Confidence 6
No 161
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.85 E-value=3.9e-20 Score=162.57 Aligned_cols=192 Identities=11% Similarity=0.066 Sum_probs=145.3
Q ss_pred EEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEecCCc-----ce--EEEcCCCCEEEEEecC---------
Q 024185 48 RRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILRLRGR-----PT--VAFDQQGLVFAVAMEA--------- 111 (271)
Q Consensus 48 v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-----~~--~~~~~~~~~l~~~~~d--------- 111 (271)
...+.|+|++++ ++++ |+.|++||+.+++....+..+.. .. ++|||||++|+.++.+
T Consensus 19 ~~~~~w~~dg~~-----~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~ 91 (740)
T 4a5s_A 19 LYSLRWISDHEY-----LYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYT 91 (740)
T ss_dssp CCCEEECSSSEE-----EEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEE
T ss_pred ccccEECCCCcE-----EEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccc
Confidence 446899999987 5554 99999999999998877776642 22 7899999999998865
Q ss_pred CeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEecCCeEEEEECCCCeEEEEeecCCCCC----------
Q 024185 112 GAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPN---------- 181 (271)
Q Consensus 112 ~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~---------- 181 (271)
+.+.+||+.+++. ..+..|...+..++|||||+.|+.+. ++.|++||+.+++..+ +.......
T Consensus 92 ~~~~~~d~~~~~~-----~~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~-lt~~g~~~~~~~g~~~~v 164 (740)
T 4a5s_A 92 ASYDIYDLNKRQL-----ITEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYR-ITWTGKEDIIYNGITDWV 164 (740)
T ss_dssp EEEEEEETTTTEE-----CCSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEE-CCSCCBTTTEEESBCCHH
T ss_pred eEEEEEECCCCcE-----EEcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEE-EcCCCCccceecCccccc
Confidence 5678999998773 33556778899999999999999885 6899999998877544 22111111
Q ss_pred -------ceeeEEECCCCCEEEEecCCC------------------------------------cEEEEEcCC---ce--
Q 024185 182 -------TNTEATFTPDGQYVVSGSGDG------------------------------------TLHAWNINT---RN-- 213 (271)
Q Consensus 182 -------~v~~~~~~~~~~~l~~~~~dg------------------------------------~i~iwd~~~---~~-- 213 (271)
....+.|||||++|+.++.|. .|++||+.+ ++
T Consensus 165 ~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~ 244 (740)
T 4a5s_A 165 YEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNA 244 (740)
T ss_dssp HHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCC
T ss_pred ccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcc
Confidence 123489999999999875321 588899988 73
Q ss_pred eEEEec------CCcceeEEEEEecCCcEEEEeC------CeEEEEcCCCCC
Q 024185 214 EVACWN------GNIGVVACLKWAPRRAMFVAAS------SVLSFWIPNPSS 253 (271)
Q Consensus 214 ~~~~~~------~~~~~v~~~~~s~~~~~l~~~~------~~v~iw~~~~~~ 253 (271)
....+. +|...+..++|+|||+.++... ..|++||+.+++
T Consensus 245 ~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~ 296 (740)
T 4a5s_A 245 TSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESS 296 (740)
T ss_dssp CEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTT
T ss_pred eEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCc
Confidence 233343 3778899999999999766552 359999998887
No 162
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.85 E-value=3.1e-18 Score=138.31 Aligned_cols=201 Identities=10% Similarity=0.041 Sum_probs=139.6
Q ss_pred ceEEeeEEecCCchhhhhhhhhhccCceEEEEEec-CcceeEEEe--cCC-cceEEEcCCCCE--EEEEe----------
Q 024185 46 GIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLM-LASFQGILR--LRG-RPTVAFDQQGLV--FAVAM---------- 109 (271)
Q Consensus 46 ~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~--~~~-~~~~~~~~~~~~--l~~~~---------- 109 (271)
.....++++|++++ +++++.+ .|.+|++. +++...... .++ ...++|+|+|++ ++++.
T Consensus 40 ~~~~~~a~spdg~~-----l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~ 113 (365)
T 1jof_A 40 EPISWMTFDHERKN-----IYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANP 113 (365)
T ss_dssp CCCSEEEECTTSSE-----EEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEE
T ss_pred CCCcEEEECCCCCE-----EEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccce
Confidence 35667999999997 5566666 89999997 777654332 222 445899999995 44443
Q ss_pred ---cCCeEEEEeCCC-CCCCcceEEEe--cCCccceEEEEEcCCCcEEEEEec-CCeEEEEECC-CCeEEE--EeecCCC
Q 024185 110 ---EAGAIKLFDSRS-YDKGPFDTFLV--GGDTAEVCDIKFSNDGKSMLLTTT-NNNIYVLDAY-GGEKRC--GFSLEPS 179 (271)
Q Consensus 110 ---~d~~i~i~d~~~-~~~~~~~~~~~--~~~~~~v~~~~~s~~~~~l~~~~~-d~~i~~~d~~-~~~~~~--~~~~~~~ 179 (271)
.++.+.+|++.. ++. ...... ..+...+.+++|+|||++++++.. ++.|++||+. +++... .+.....
T Consensus 114 ~~~~~g~v~v~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~ 191 (365)
T 1jof_A 114 FYKFAGYGNVFSVSETGKL--EKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDP 191 (365)
T ss_dssp ESSSCCEEEEEEECTTCCE--EEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSST
T ss_pred eecCCceEEEEccCCCCcC--cceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCC
Confidence 688999999974 442 111111 124567899999999998887764 6899999998 676532 2332111
Q ss_pred CCceeeEEECCCCCEEEEecC-CCcEEEEEcC--CceeE---EEe---c----CCcc------eeEEEE-EecCCcEEEE
Q 024185 180 PNTNTEATFTPDGQYVVSGSG-DGTLHAWNIN--TRNEV---ACW---N----GNIG------VVACLK-WAPRRAMFVA 239 (271)
Q Consensus 180 ~~~v~~~~~~~~~~~l~~~~~-dg~i~iwd~~--~~~~~---~~~---~----~~~~------~v~~~~-~s~~~~~l~~ 239 (271)
...+..++|+|||+++++++. ++.+.+|++. +++.. ..+ . +|.. .+..++ |+|||++|++
T Consensus 192 g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v 271 (365)
T 1jof_A 192 GDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFA 271 (365)
T ss_dssp TCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEE
T ss_pred CCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEE
Confidence 234888999999999988765 6899999875 45542 222 1 1222 578999 9999998877
Q ss_pred eC---C-----eEEEEcCC-CCCC
Q 024185 240 AS---S-----VLSFWIPN-PSSN 254 (271)
Q Consensus 240 ~~---~-----~v~iw~~~-~~~~ 254 (271)
++ + .|.+|+++ ++++
T Consensus 272 ~~~~~~~~~~~~i~v~~~~~~g~~ 295 (365)
T 1jof_A 272 SSRANKFELQGYIAGFKLRDCGSI 295 (365)
T ss_dssp EEEESSTTSCCEEEEEEECTTSCE
T ss_pred ECCCCCCCCCCeEEEEEECCCCCE
Confidence 64 3 79999986 4553
No 163
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.84 E-value=1.4e-17 Score=134.16 Aligned_cols=199 Identities=15% Similarity=0.152 Sum_probs=133.5
Q ss_pred ccceEEeeEEecCCchhhhhhhhhhccC----ceEEEEEecC--cce--eEEEecCC--cceEEEcCCCCEEEEEe-cCC
Q 024185 44 SKGIRRGLFLSACLQLMIALCLVLLTTA----LEYGIFVLML--ASF--QGILRLRG--RPTVAFDQQGLVFAVAM-EAG 112 (271)
Q Consensus 44 ~~~~v~~~~~s~~~~~~~~~~l~s~~~d----g~i~iwd~~~--~~~--~~~~~~~~--~~~~~~~~~~~~l~~~~-~d~ 112 (271)
+......++++|+++. +++++.+ +.+.+|+++. ++. +.....+. ...+++ ++++|++++ .++
T Consensus 48 ~~~~p~~l~~spdg~~-----l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~ 120 (361)
T 3scy_A 48 EVANPSYLIPSADGKF-----VYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGG 120 (361)
T ss_dssp ECSCCCSEEECTTSSE-----EEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTT
T ss_pred cCCCCceEEECCCCCE-----EEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCC
Confidence 5566777999999997 5555554 8999999875 433 23333333 233666 888887776 578
Q ss_pred eEEEEeCCCCCC-Ccc-eEEEecC--------CccceEEEEEcCCCcEEEEEec-CCeEEEEECCCCeE------E----
Q 024185 113 AIKLFDSRSYDK-GPF-DTFLVGG--------DTAEVCDIKFSNDGKSMLLTTT-NNNIYVLDAYGGEK------R---- 171 (271)
Q Consensus 113 ~i~i~d~~~~~~-~~~-~~~~~~~--------~~~~v~~~~~s~~~~~l~~~~~-d~~i~~~d~~~~~~------~---- 171 (271)
.+.+|++..... ... ......+ +...+.+++|+|+|+++++++. ++.+++|++..... +
T Consensus 121 ~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~ 200 (361)
T 3scy_A 121 SITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKG 200 (361)
T ss_dssp EEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEE
T ss_pred EEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecc
Confidence 999999975432 111 1111111 1234588999999997776654 88999998875431 1
Q ss_pred --EEeecCCCCCceeeEEECCCCCEEEEec-CCCcEEEEEcCCcee--EEEe---cCCcceeEEEEEecCCcEEEEeC--
Q 024185 172 --CGFSLEPSPNTNTEATFTPDGQYVVSGS-GDGTLHAWNINTRNE--VACW---NGNIGVVACLKWAPRRAMFVAAS-- 241 (271)
Q Consensus 172 --~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~--~~~~---~~~~~~v~~~~~s~~~~~l~~~~-- 241 (271)
....... ......++|+|||+++++++ .++.|.+||+.+++. +..+ ..+......++|+|||++|++++
T Consensus 201 ~~~~~~~~~-~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~ 279 (361)
T 3scy_A 201 TPEAFKVAP-GSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRL 279 (361)
T ss_dssp EEEEEECCT-TCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECS
T ss_pred cccceecCC-CCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCC
Confidence 1222221 23477899999999887776 589999999987754 3333 22334568999999999886654
Q ss_pred --CeEEEEcCC
Q 024185 242 --SVLSFWIPN 250 (271)
Q Consensus 242 --~~v~iw~~~ 250 (271)
+.+.+|+++
T Consensus 280 ~~~~i~v~~~~ 290 (361)
T 3scy_A 280 KADGVAIFKVD 290 (361)
T ss_dssp SSCEEEEEEEC
T ss_pred CCCEEEEEEEc
Confidence 469999986
No 164
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.82 E-value=5.5e-18 Score=137.69 Aligned_cols=203 Identities=11% Similarity=0.021 Sum_probs=144.5
Q ss_pred EEcccccceEEe-----eEEecCCchhhhhhhhhhcc-Cc--eEEEEEecCcceeEEEecCCcc--eEEEcCCCCEEEEE
Q 024185 39 EFFATSKGIRRG-----LFLSACLQLMIALCLVLLTT-AL--EYGIFVLMLASFQGILRLRGRP--TVAFDQQGLVFAVA 108 (271)
Q Consensus 39 ~~~~~~~~~v~~-----~~~s~~~~~~~~~~l~s~~~-dg--~i~iwd~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~ 108 (271)
..+..+...... ..|+|+|+. ++.++. ++ .|.+||+++++..+....+... ...|+||++.|+.+
T Consensus 24 ~~lt~~~~~~~~~~~~~~~~SpDg~~-----l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~ 98 (388)
T 3pe7_A 24 TRLTPPDVTCHRNYFYQKCFTRDGSK-----LLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYV 98 (388)
T ss_dssp EECSCTTSCEECCCTTSCCBCTTSCE-----EEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEE
T ss_pred EEecCCcccccchhhcCccCCCCCCE-----EEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEE
Confidence 335555555555 789999998 444444 66 4888899888877766666433 47899999999999
Q ss_pred ecCCeEEEEeCCCCCCCcceEEEecCCccceEEE--EEcCCCcEEEEEe----------------------cCCeEEEEE
Q 024185 109 MEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDI--KFSNDGKSMLLTT----------------------TNNNIYVLD 164 (271)
Q Consensus 109 ~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~--~~s~~~~~l~~~~----------------------~d~~i~~~d 164 (271)
+.++.+++||+.+++. ......+...+... .++|++++++... .+..|++||
T Consensus 99 ~~~~~l~~~d~~~g~~----~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d 174 (388)
T 3pe7_A 99 KDGRNLMRVDLATLEE----NVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVD 174 (388)
T ss_dssp ETTTEEEEEETTTCCE----EEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEE
T ss_pred eCCCeEEEEECCCCcc----eeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEE
Confidence 9999999999998874 22333344444333 3489999887432 346899999
Q ss_pred CCCCeEEEEeecCCCCCceeeEEECC-CCCEEEEecCC------CcEEEEEcCCceeEEEecCCc--ceeEEEEEecCCc
Q 024185 165 AYGGEKRCGFSLEPSPNTNTEATFTP-DGQYVVSGSGD------GTLHAWNINTRNEVACWNGNI--GVVACLKWAPRRA 235 (271)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~~--~~v~~~~~s~~~~ 235 (271)
+.+++...... +.. .+..+.|+| ||+.++....+ ..|.++|...++. ..+..+. ..+..++|+|||+
T Consensus 175 ~~~g~~~~l~~-~~~--~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~spdg~ 250 (388)
T 3pe7_A 175 LKTGESTVILQ-ENQ--WLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVKTHAEGESCTHEFWVPDGS 250 (388)
T ss_dssp TTTCCEEEEEE-ESS--CEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-EESCCCCTTEEEEEEEECTTSS
T ss_pred CCCCceEEeec-CCc--cccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-EEeeeCCCCcccccceECCCCC
Confidence 99887654433 333 378899999 99988876653 3788888765544 3443343 3578899999999
Q ss_pred EEEEeC---C----eEEEEcCCCCCC
Q 024185 236 MFVAAS---S----VLSFWIPNPSSN 254 (271)
Q Consensus 236 ~l~~~~---~----~v~iw~~~~~~~ 254 (271)
.|+..+ + .|.+||+.+++.
T Consensus 251 ~l~~~~~~~~~~~~~l~~~d~~~g~~ 276 (388)
T 3pe7_A 251 ALVYVSYLKGSPDRFIYSADPETLEN 276 (388)
T ss_dssp CEEEEEEETTCCCEEEEEECTTTCCE
T ss_pred EEEEEecCCCCCcceEEEEecCCCce
Confidence 776654 1 299999998864
No 165
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.82 E-value=1e-16 Score=124.89 Aligned_cols=226 Identities=10% Similarity=0.122 Sum_probs=157.0
Q ss_pred eeEEee-ecceeeEEEEeeccceeeEEEEEcc------cccceEEeeEEe-cCCchhhhhhhhhhc-cCceEEEEEecCc
Q 024185 12 QALLFA-RQNIILILLESLCGIYQCMIIEFFA------TSKGIRRGLFLS-ACLQLMIALCLVLLT-TALEYGIFVLMLA 82 (271)
Q Consensus 12 ~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~v~~~~~s-~~~~~~~~~~l~s~~-~dg~i~iwd~~~~ 82 (271)
..++++ ..++.+..++.. + .....+. .+......+++. +++.. +++.. .++.|++|| .++
T Consensus 41 g~l~v~~~~~~~i~~~d~~-g----~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l-----~v~~~~~~~~i~~~d-~~g 109 (286)
T 1q7f_A 41 NDIIVADTNNHRIQIFDKE-G----RFKFQFGECGKRDSQLLYPNRVAVVRNSGDI-----IVTERSPTHQIQIYN-QYG 109 (286)
T ss_dssp CCEEEEEGGGTEEEEECTT-S----CEEEEECCBSSSTTCBSSEEEEEEETTTTEE-----EEEECGGGCEEEEEC-TTS
T ss_pred CCEEEEECCCCEEEEECCC-C----cEEEEecccCCCcccccCceEEEEEcCCCeE-----EEEcCCCCCEEEEEC-CCC
Confidence 445555 346677777654 3 1122232 233467788884 67765 34443 388999999 567
Q ss_pred ceeEEEecC---CcceEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEecCCe
Q 024185 83 SFQGILRLR---GRPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNN 159 (271)
Q Consensus 83 ~~~~~~~~~---~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~ 159 (271)
+.+..+... ....++++|+++.+++...++.|.+||... +. ........+...+..++++|+|+.+++...++.
T Consensus 110 ~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g-~~--~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~ 186 (286)
T 1q7f_A 110 QFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNG-NV--LHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHC 186 (286)
T ss_dssp CEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTS-CE--EEEEECTTTCSSEEEEEECSSSEEEEEEGGGTE
T ss_pred cEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCC-CE--EEEeCCCCccCCcEEEEECCCCCEEEEECCCCE
Confidence 766666432 345699999999777777789999999653 32 222222244567899999999997777777999
Q ss_pred EEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEecCCC-cEEEEEcCCceeEEEecCCc--ceeEEEEEecCCcE
Q 024185 160 IYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDG-TLHAWNINTRNEVACWNGNI--GVVACLKWAPRRAM 236 (271)
Q Consensus 160 i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-~i~iwd~~~~~~~~~~~~~~--~~v~~~~~s~~~~~ 236 (271)
|++||. +++.+..+........+..++++|+|+++++...++ .|.+||. +++.+..+..+. ..+.+++++|+|++
T Consensus 187 i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~g~l 264 (286)
T 1q7f_A 187 VKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMDDGSV 264 (286)
T ss_dssp EEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEETTTEE
T ss_pred EEEEcC-CCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEECCCCcE
Confidence 999996 456666665433223478899999999888888776 9999995 567766665443 24679999999998
Q ss_pred EEEeC-CeEEEEcCCCCC
Q 024185 237 FVAAS-SVLSFWIPNPSS 253 (271)
Q Consensus 237 l~~~~-~~v~iw~~~~~~ 253 (271)
+++.. +.|++|++....
T Consensus 265 ~vs~~~~~v~v~~~~~~~ 282 (286)
T 1q7f_A 265 VLASKDYRLYIYRYVQLA 282 (286)
T ss_dssp EEEETTTEEEEEECSCCC
T ss_pred EEECCCCeEEEEEccccc
Confidence 88765 889999986543
No 166
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.81 E-value=4.9e-19 Score=155.58 Aligned_cols=228 Identities=11% Similarity=0.084 Sum_probs=153.1
Q ss_pred eEEeeecceeeEEEEeeccceeeEEEEEcccccce-----EEeeEEecCCchhhhhhhhhhccC---------ceEEEEE
Q 024185 13 ALLFARQNIILILLESLCGIYQCMIIEFFATSKGI-----RRGLFLSACLQLMIALCLVLLTTA---------LEYGIFV 78 (271)
Q Consensus 13 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----v~~~~~s~~~~~~~~~~l~s~~~d---------g~i~iwd 78 (271)
.+++.. ++.+.+++...+. ....+.++... .....+||||+. ++.++.+ +.+.+||
T Consensus 29 ~~~~~~-~~~i~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Spdg~~-----l~~~~~~~~~~r~~~~~~~~~~d 98 (740)
T 4a5s_A 29 EYLYKQ-ENNILVFNAEYGN----SSVFLENSTFDEFGHSINDYSISPDGQF-----ILLEYNYVKQWRHSYTASYDIYD 98 (740)
T ss_dssp EEEEEE-TTEEEEEETTTCC----EEEEECTTTTTTCCSCCCEEEECTTSSE-----EEEEEEEEECSSSCEEEEEEEEE
T ss_pred cEEEEc-CCcEEEEECCCCc----eEEEEechhhhhhcccccceEECCCCCE-----EEEEECCeeeEEEccceEEEEEE
Confidence 344443 8889999887773 22345555432 233788999998 5566665 5677999
Q ss_pred ecCcceeEEEecC--CcceEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcceEEEecCCccce-----------------
Q 024185 79 LMLASFQGILRLR--GRPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEV----------------- 139 (271)
Q Consensus 79 ~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v----------------- 139 (271)
+++++... +..+ .....+|||||+.||.+. ++.|++||..+++. ......++...+
T Consensus 99 ~~~~~~~~-l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~---~~lt~~g~~~~~~~g~~~~v~~ee~~~~~ 173 (740)
T 4a5s_A 99 LNKRQLIT-EERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPS---YRITWTGKEDIIYNGITDWVYEEEVFSAY 173 (740)
T ss_dssp TTTTEECC-SSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCC---EECCSCCBTTTEEESBCCHHHHHHTSSSS
T ss_pred CCCCcEEE-cccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCce---EEEcCCCCccceecCcccccccchhcCCC
Confidence 99988654 3332 355699999999999885 78999999988764 122223333222
Q ss_pred EEEEEcCCCcEEEEEecCC------------------------------------eEEEEECCC---Ce--EEEEeecC-
Q 024185 140 CDIKFSNDGKSMLLTTTNN------------------------------------NIYVLDAYG---GE--KRCGFSLE- 177 (271)
Q Consensus 140 ~~~~~s~~~~~l~~~~~d~------------------------------------~i~~~d~~~---~~--~~~~~~~~- 177 (271)
..+.|||||++|+.++.|. +|++||+.+ ++ ....+...
T Consensus 174 ~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~ 253 (740)
T 4a5s_A 174 SALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPA 253 (740)
T ss_dssp BCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCH
T ss_pred cceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCc
Confidence 3589999999999875321 588899988 73 12233220
Q ss_pred ---CCCCceeeEEECCCCCEEEEecC----CCcEEEEEcCCce----eE--EEe--cCCcceeE-----EEEEecCCcEE
Q 024185 178 ---PSPNTNTEATFTPDGQYVVSGSG----DGTLHAWNINTRN----EV--ACW--NGNIGVVA-----CLKWAPRRAMF 237 (271)
Q Consensus 178 ---~~~~~v~~~~~~~~~~~l~~~~~----dg~i~iwd~~~~~----~~--~~~--~~~~~~v~-----~~~~s~~~~~l 237 (271)
.....+..++|+|||+.++.... +..|.+||+.+++ +. ..+ .+|...+. .+.|+|||+.+
T Consensus 254 ~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l 333 (740)
T 4a5s_A 254 SMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSF 333 (740)
T ss_dssp HHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEE
T ss_pred cCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEE
Confidence 12245888999999997665432 3479999999887 21 112 44665554 78999999977
Q ss_pred E-EeC-----CeEEEEcCCCCCCC
Q 024185 238 V-AAS-----SVLSFWIPNPSSNS 255 (271)
Q Consensus 238 ~-~~~-----~~v~iw~~~~~~~~ 255 (271)
+ ..+ ..|.+||..+++..
T Consensus 334 ~~~~s~~~G~~~l~~~~~~~~~~~ 357 (740)
T 4a5s_A 334 YKIISNEEGYRHICYFQIDKKDCT 357 (740)
T ss_dssp EEEEECTTSCEEEEEEETTCSSCE
T ss_pred EEEEEcCCCceEEEEEECCCCceE
Confidence 6 554 45999998876654
No 167
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.80 E-value=3.5e-17 Score=131.87 Aligned_cols=224 Identities=10% Similarity=0.034 Sum_probs=143.2
Q ss_pred ceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhh-----hhhccCceEEEEEecCcceeEEEecC---
Q 024185 20 NIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCL-----VLLTTALEYGIFVLMLASFQGILRLR--- 91 (271)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l-----~s~~~dg~i~iwd~~~~~~~~~~~~~--- 91 (271)
++.+..++...+. ....+..+... .++++|+++++++..- ..|..++.|.+||..+++.+..+...
T Consensus 30 d~~v~v~D~~t~~----~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~ 103 (361)
T 2oiz_A 30 ESRVHVYDYTNGK----FLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKR 103 (361)
T ss_dssp GCEEEEEETTTCC----EEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTB
T ss_pred cCeEEEEECCCCe----EEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccc
Confidence 4578888876652 22334444444 7999999998433100 00124788999999999988887643
Q ss_pred -----CcceEEEcCCCCEEEEEec--CCeEEEEeCCCCCCCcceEEE-ecCCccceEEEEEcCCC---------------
Q 024185 92 -----GRPTVAFDQQGLVFAVAME--AGAIKLFDSRSYDKGPFDTFL-VGGDTAEVCDIKFSNDG--------------- 148 (271)
Q Consensus 92 -----~~~~~~~~~~~~~l~~~~~--d~~i~i~d~~~~~~~~~~~~~-~~~~~~~v~~~~~s~~~--------------- 148 (271)
....++++|||++|+++.. ++.|.+||+.+++. ... +. .. ....+.+.|++
T Consensus 104 ~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~----~~~~i~-~~-~~~~v~~~p~~~~~~~~~~~dg~~~~ 177 (361)
T 2oiz_A 104 VQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDY----VEDVTA-AA-GCWSVIPQPNRPRSFMTICGDGGLLT 177 (361)
T ss_dssp CCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEE----EEEEGG-GT-TEEEEEECTTSSSEEEEEETTSSEEE
T ss_pred cccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcE----EEEEec-CC-CcceeEEcCCCCeeEEEECCCCcEEE
Confidence 2345999999999999864 57999999988764 222 11 10 11112222322
Q ss_pred ----------------------------------cEEEEEecCCeEEEEECCCCeE--EEEeecCC--------CCCcee
Q 024185 149 ----------------------------------KSMLLTTTNNNIYVLDAYGGEK--RCGFSLEP--------SPNTNT 184 (271)
Q Consensus 149 ----------------------------------~~l~~~~~d~~i~~~d~~~~~~--~~~~~~~~--------~~~~v~ 184 (271)
..++..+.++.+.++|+...+. ...+.... .+....
T Consensus 178 v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~ 257 (361)
T 2oiz_A 178 INLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYN 257 (361)
T ss_dssp EEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSS
T ss_pred EEECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCee
Confidence 2222233344455555443221 11111000 001111
Q ss_pred eEEECCCCCEEEEecC-----------CCcEEEEEcCCceeEEEecCCcceeEEEEEecCCcEEEEeC-CeEEEEcCCCC
Q 024185 185 EATFTPDGQYVVSGSG-----------DGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS-SVLSFWIPNPS 252 (271)
Q Consensus 185 ~~~~~~~~~~l~~~~~-----------dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~~v~iw~~~~~ 252 (271)
.++|+|+++.++++.. .+.|.+||+.+++.+.++..+. +.+++|+|||++|++++ ++|.+||..++
T Consensus 258 ~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~~~v~v~D~~t~ 335 (361)
T 2oiz_A 258 LVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDGGNVNVYDISQP 335 (361)
T ss_dssp CEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECSSCEEEEECSSS
T ss_pred EEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCCCeEEEEECCCC
Confidence 2789999888876543 3479999999999999998776 89999999999999887 89999999998
Q ss_pred --CCCcC
Q 024185 253 --SNSTD 257 (271)
Q Consensus 253 --~~~~~ 257 (271)
+....
T Consensus 336 ~l~~~~~ 342 (361)
T 2oiz_A 336 EPKLLRT 342 (361)
T ss_dssp SCEEEEE
T ss_pred cceeeEE
Confidence 65554
No 168
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.80 E-value=6.2e-18 Score=137.35 Aligned_cols=231 Identities=10% Similarity=0.020 Sum_probs=154.4
Q ss_pred ecceeEEeeec-ce--eeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCccee
Q 024185 9 PITQALLFARQ-NI--ILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQ 85 (271)
Q Consensus 9 ~~~~~l~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~ 85 (271)
|..+.+++... ++ .+..++...+ ...+...++...+....|+|+++. |+.++.++.+++||+.+++..
T Consensus 45 pDg~~l~~~~~~~g~~~l~~~d~~~g----~~~~lt~~~~~~~~~~~~spdg~~-----l~~~~~~~~l~~~d~~~g~~~ 115 (388)
T 3pe7_A 45 RDGSKLLFGGAFDGPWNYYLLDLNTQ----VATQLTEGRGDNTFGGFLSPDDDA-----LFYVKDGRNLMRVDLATLEEN 115 (388)
T ss_dssp TTSCEEEEEECTTSSCEEEEEETTTC----EEEECCCSSCBCSSSCEECTTSSE-----EEEEETTTEEEEEETTTCCEE
T ss_pred CCCCEEEEEEcCCCCceEEEEeCCCC----ceEEeeeCCCCCccceEEcCCCCE-----EEEEeCCCeEEEEECCCCcce
Confidence 34456777765 44 4666666555 333445555555556789999998 677778889999999999877
Q ss_pred EEEecCCcce----EEEcCCCCEEEEEe----------------------cCCeEEEEeCCCCCCCcceEEEecCCccce
Q 024185 86 GILRLRGRPT----VAFDQQGLVFAVAM----------------------EAGAIKLFDSRSYDKGPFDTFLVGGDTAEV 139 (271)
Q Consensus 86 ~~~~~~~~~~----~~~~~~~~~l~~~~----------------------~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v 139 (271)
..+..+.... ..++|++++++... .+..|++||+.+++. ..+..+...+
T Consensus 116 ~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~-----~~l~~~~~~~ 190 (388)
T 3pe7_A 116 VVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGES-----TVILQENQWL 190 (388)
T ss_dssp EEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCE-----EEEEEESSCE
T ss_pred eeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCce-----EEeecCCccc
Confidence 6666554322 34589999887432 346899999998763 3333455678
Q ss_pred EEEEEcC-CCcEEEEEecC------CeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEecC-CC----cEEEE
Q 024185 140 CDIKFSN-DGKSMLLTTTN------NNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSG-DG----TLHAW 207 (271)
Q Consensus 140 ~~~~~s~-~~~~l~~~~~d------~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg----~i~iw 207 (271)
..++|+| ||+.|+....+ ..|.++|...++. ..+..+.....+..+.|+|||+.|+..+. ++ .|++|
T Consensus 191 ~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~ 269 (388)
T 3pe7_A 191 GHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSA 269 (388)
T ss_dssp EEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-EESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEE
T ss_pred cccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-EEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEE
Confidence 9999999 99999887753 3788888766543 33333332123677899999997765443 22 39999
Q ss_pred EcCCceeE--EEecCCcce---eEEEEEecCCcEEEEe---------C--CeEEEEcCCCCCC
Q 024185 208 NINTRNEV--ACWNGNIGV---VACLKWAPRRAMFVAA---------S--SVLSFWIPNPSSN 254 (271)
Q Consensus 208 d~~~~~~~--~~~~~~~~~---v~~~~~s~~~~~l~~~---------~--~~v~iw~~~~~~~ 254 (271)
|+.+++.. ..+.++... .....|+|||+.|+.. . ..|.+||+.+++.
T Consensus 270 d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~ 332 (388)
T 3pe7_A 270 DPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQ 332 (388)
T ss_dssp CTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEE
T ss_pred ecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCce
Confidence 99988753 333331111 1224799999987742 2 5799999988754
No 169
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.80 E-value=5.1e-17 Score=129.35 Aligned_cols=216 Identities=10% Similarity=0.036 Sum_probs=154.1
Q ss_pred eeEEEEeeccceeeEEEEEcc-cccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcc-eeEEEec---------
Q 024185 22 ILILLESLCGIYQCMIIEFFA-TSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLAS-FQGILRL--------- 90 (271)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~-~~~~~~~--------- 90 (271)
.+..++...+. ..+.+. .+-.....++++|+|+. +++...++.|++||.+... .+..+..
T Consensus 70 ~i~~~d~~~g~----~~~~~~~~~~~~p~gia~d~~g~l-----~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~ 140 (329)
T 3fvz_A 70 TILVIDPNNAE----ILQSSGKNLFYLPHGLSIDTDGNY-----WVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQN 140 (329)
T ss_dssp CEEEECTTTCC----EEEEECTTTCSSEEEEEECTTSCE-----EEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTT
T ss_pred cEEEEECCCCe----EEeccCCCccCCceEEEECCCCCE-----EEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCcc
Confidence 56777665552 222232 34456778999999996 6677888999999986542 4555521
Q ss_pred C--CcceEEEcC-CCCEEEEEe-cCCeEEEEeCCCCCCCcceEEEec----------CCccceEEEEEcCC-CcEEEEEe
Q 024185 91 R--GRPTVAFDQ-QGLVFAVAM-EAGAIKLFDSRSYDKGPFDTFLVG----------GDTAEVCDIKFSND-GKSMLLTT 155 (271)
Q Consensus 91 ~--~~~~~~~~~-~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~----------~~~~~v~~~~~s~~-~~~l~~~~ 155 (271)
+ ....++++| +++.+++.+ .++.|++||. +++. ...+. ++......++++|+ +.++++..
T Consensus 141 ~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~-~g~~----~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~ 215 (329)
T 3fvz_A 141 HFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSP-SGKF----VTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADR 215 (329)
T ss_dssp CCSSEEEEEECTTTCCEEEEECSSCCEEEEECT-TSCE----EEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEET
T ss_pred ccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcC-CCCE----EEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEEC
Confidence 1 234599999 777777775 6899999994 3442 22222 12234889999998 77667777
Q ss_pred cCCeEEEEECCCCeEEEEeecCCCCCceeeEEECC------CCCEEEEecCCCcEEEEEcCCceeEEEec---CCcceeE
Q 024185 156 TNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTP------DGQYVVSGSGDGTLHAWNINTRNEVACWN---GNIGVVA 226 (271)
Q Consensus 156 ~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~------~~~~l~~~~~dg~i~iwd~~~~~~~~~~~---~~~~~v~ 226 (271)
.++.|++||..+++.+..+........+..++++| +|+..++...+..|++||..+++.+..+. ++...+.
T Consensus 216 ~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~ 295 (329)
T 3fvz_A 216 ENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPH 295 (329)
T ss_dssp TTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEE
T ss_pred CCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCee
Confidence 78999999998899888876544444578899999 33333333445689999999999998873 5666789
Q ss_pred EEEEecCCcEEEEeC--CeEEEEcCCC
Q 024185 227 CLKWAPRRAMFVAAS--SVLSFWIPNP 251 (271)
Q Consensus 227 ~~~~s~~~~~l~~~~--~~v~iw~~~~ 251 (271)
+++++|+|.++++.. +.|++|+++.
T Consensus 296 ~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 296 DIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp EEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred EEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 999999997777765 7799999865
No 170
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.79 E-value=2.9e-17 Score=142.59 Aligned_cols=233 Identities=13% Similarity=-0.008 Sum_probs=152.8
Q ss_pred eccee-EEeeec-ceeeEEEEee--c-cceeeEEEEEccc-----ccceEEeeEEecCCchhhhhhhhhhccC-------
Q 024185 9 PITQA-LLFARQ-NIILILLESL--C-GIYQCMIIEFFAT-----SKGIRRGLFLSACLQLMIALCLVLLTTA------- 71 (271)
Q Consensus 9 ~~~~~-l~~~~~-~~~~~~~~~~--~-~~~~~~~~~~~~~-----~~~~v~~~~~s~~~~~~~~~~l~s~~~d------- 71 (271)
|..+. +++... +..+..++.. . +. .. .+.. +...+..++|+|+|+. |++++.+
T Consensus 88 PDg~~~la~~~~~~~~l~~~~~~~~g~~~--~~---~l~~~~~~~~~~~~~~~~~spDg~~-----l~~~~~~~~~~~~~ 157 (662)
T 3azo_A 88 PAGGPLLVFTHFGDQRLYAFEPDAPGGAV--PR---PLTPVSAVGGGLRWADPVLLPERGE-----VWCMAEEFTGEGPS 157 (662)
T ss_dssp SSSSCEEEEEBTTTCCEEEECTTSTTCCC--CE---ECSCCCCSTTCEEEEEEEEETTTTE-----EEEEEEEECSSSTT
T ss_pred cCCCeEEEEEECCCCeEEEEcCCCCCCCC--CE---eccCCccCCCCccccCcEECCCCCE-----EEEEEecccCCCCC
Confidence 55666 666643 4566666543 1 21 11 1333 5667888999999998 5566665
Q ss_pred ---ceEEEEEecC------cceeEEE-ecCC-cceEEEcCCCCEEEEEecC--------CeEEEEeCC-CCCCCcceEEE
Q 024185 72 ---LEYGIFVLML------ASFQGIL-RLRG-RPTVAFDQQGLVFAVAMEA--------GAIKLFDSR-SYDKGPFDTFL 131 (271)
Q Consensus 72 ---g~i~iwd~~~------~~~~~~~-~~~~-~~~~~~~~~~~~l~~~~~d--------~~i~i~d~~-~~~~~~~~~~~ 131 (271)
..|++||+.+ ++..... ..+. ...++|+|||++|+.++.+ ..|++||+. +++.... ...
T Consensus 158 ~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~-~~l 236 (662)
T 3azo_A 158 DVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADT-RTL 236 (662)
T ss_dssp CEEEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEE-EEE
T ss_pred CceeEEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCccccc-EEe
Confidence 6899999988 5554333 2232 3448999999999988754 379999998 4521001 222
Q ss_pred ecCCccceEEEEEcCCCcEEEEEecCC--eEEEEECCCCeEEEEeecCCCC------CceeeEEECCCCCEEEEecCCCc
Q 024185 132 VGGDTAEVCDIKFSNDGKSMLLTTTNN--NIYVLDAYGGEKRCGFSLEPSP------NTNTEATFTPDGQYVVSGSGDGT 203 (271)
Q Consensus 132 ~~~~~~~v~~~~~s~~~~~l~~~~~d~--~i~~~d~~~~~~~~~~~~~~~~------~~v~~~~~~~~~~~l~~~~~dg~ 203 (271)
..+|...+..++|+|||+++++++.++ .|++||+.+++.......+... ..+..++|+|+++++++++. +.
T Consensus 237 ~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~ 315 (662)
T 3azo_A 237 LGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GA 315 (662)
T ss_dssp EEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SS
T ss_pred CCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-Cc
Confidence 234567899999999999777777777 7777787677654433322111 01456899999999999998 99
Q ss_pred EEEE--EcCCceeEEEecCCcceeEEE-EEecCCcEEEEeC----CeEEEEcCCCCCC
Q 024185 204 LHAW--NINTRNEVACWNGNIGVVACL-KWAPRRAMFVAAS----SVLSFWIPNPSSN 254 (271)
Q Consensus 204 i~iw--d~~~~~~~~~~~~~~~~v~~~-~~s~~~~~l~~~~----~~v~iw~~~~~~~ 254 (271)
+++| |+.+++ +..+..|...+..+ +++++.-++++++ ..+.+||+.+++.
T Consensus 316 ~~l~~~d~~~~~-~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~ 372 (662)
T 3azo_A 316 AVLGILDPESGE-LVDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGRA 372 (662)
T ss_dssp CEEEEEETTTTE-EEECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred cEEEEEECCCCc-EEEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCce
Confidence 9999 555555 67777777777766 4443332333333 2477777777654
No 171
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.78 E-value=7.1e-16 Score=120.79 Aligned_cols=221 Identities=10% Similarity=0.017 Sum_probs=155.5
Q ss_pred EEe-eecceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEec--
Q 024185 14 LLF-ARQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILRL-- 90 (271)
Q Consensus 14 l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-- 90 (271)
+++ +..++.+..++...+ .+.+..+...+.+++++|+++. +++...++.|.+||.++++.......
T Consensus 42 l~~~~~~~~~i~~~~~~~~------~~~~~~~~~~~~~l~~~~dg~l-----~v~~~~~~~i~~~d~~~g~~~~~~~~~~ 110 (296)
T 3e5z_A 42 VIFSDVRQNRTWAWSDDGQ------LSPEMHPSHHQNGHCLNKQGHL-----IACSHGLRRLERQREPGGEWESIADSFE 110 (296)
T ss_dssp EEEEEGGGTEEEEEETTSC------EEEEESSCSSEEEEEECTTCCE-----EEEETTTTEEEEECSTTCCEEEEECEET
T ss_pred EEEEeCCCCEEEEEECCCC------eEEEECCCCCcceeeECCCCcE-----EEEecCCCeEEEEcCCCCcEEEEeeccC
Confidence 444 455677777776544 2235556677889999999987 55566678999999988875444322
Q ss_pred ----CCcceEEEcCCCCEEEEE----e-------------cCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCc
Q 024185 91 ----RGRPTVAFDQQGLVFAVA----M-------------EAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGK 149 (271)
Q Consensus 91 ----~~~~~~~~~~~~~~l~~~----~-------------~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 149 (271)
.....++++|+|+++++. + ..+.|..++.. ++ ...+..+......++|+|+++
T Consensus 111 ~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~-----~~~~~~~~~~~~gi~~s~dg~ 184 (296)
T 3e5z_A 111 GKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT-----LSAPIRDRVKPNGLAFLPSGN 184 (296)
T ss_dssp TEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-----EEEEECCCSSEEEEEECTTSC
T ss_pred CCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CC-----EEEeecCCCCCccEEECCCCC
Confidence 124559999999987763 2 13466666665 33 223334556778999999999
Q ss_pred EEEEEecCCeEEEEECC-CCeE---EEEeecCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCCceeEEEecCCccee
Q 024185 150 SMLLTTTNNNIYVLDAY-GGEK---RCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVV 225 (271)
Q Consensus 150 ~l~~~~~d~~i~~~d~~-~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v 225 (271)
.+++.+.++.|++||+. +++. ...+ ......+..++++++|++.++. ++.|.+||.. ++.+..+..+.. +
T Consensus 185 ~lv~~~~~~~i~~~~~~~~g~~~~~~~~~--~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~~~~~~~~~-~ 258 (296)
T 3e5z_A 185 LLVSDTGDNATHRYCLNARGETEYQGVHF--TVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDELGRVLTPQT-T 258 (296)
T ss_dssp EEEEETTTTEEEEEEECSSSCEEEEEEEE--CCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCEEEEEECSSC-C
T ss_pred EEEEeCCCCeEEEEEECCCCcCcCCCeEe--eCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCEEEEEECCCC-c
Confidence 88666778999999986 5554 2333 2222346679999999976666 7889999986 788888877777 8
Q ss_pred EEEEE-ecCCcEEEEeC-CeEEEEcCCCCCCCcC
Q 024185 226 ACLKW-APRRAMFVAAS-SVLSFWIPNPSSNSTD 257 (271)
Q Consensus 226 ~~~~~-s~~~~~l~~~~-~~v~iw~~~~~~~~~~ 257 (271)
.+++| +|+++.|++++ +.+.-+++++.++++.
T Consensus 259 ~~~~f~~~d~~~L~v~t~~~l~~~~~~~~~~~~~ 292 (296)
T 3e5z_A 259 SNLCFGGPEGRTLYMTVSTEFWSIETNVRGLEHH 292 (296)
T ss_dssp CEEEEESTTSCEEEEEETTEEEEEECSCCBCCC-
T ss_pred eeEEEECCCCCEEEEEcCCeEEEEEccccccccc
Confidence 99999 58888777766 7777777777766543
No 172
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.77 E-value=2.8e-17 Score=142.70 Aligned_cols=201 Identities=13% Similarity=0.015 Sum_probs=143.1
Q ss_pred cccccceEEeeEEecCCchhhhhhhhhh--ccCceEEEEEecCcceeEEEecCC--cc---------eEEEc--CCCCE-
Q 024185 41 FATSKGIRRGLFLSACLQLMIALCLVLL--TTALEYGIFVLMLASFQGILRLRG--RP---------TVAFD--QQGLV- 104 (271)
Q Consensus 41 ~~~~~~~v~~~~~s~~~~~~~~~~l~s~--~~dg~i~iwd~~~~~~~~~~~~~~--~~---------~~~~~--~~~~~- 104 (271)
+..|...+..+.+++++.. +++. +.++...||....+.....+..+. +. ...|+ |||++
T Consensus 19 ~~~~~~~~~~~~~s~~~~~-----~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~ 93 (662)
T 3azo_A 19 VASRSGRPACVGAVGDEVW-----WVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPL 93 (662)
T ss_dssp HHHTCSCCEEEEEETTEEE-----EEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCE
T ss_pred HhhcCCccceeEEcCCeEE-----EEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeE
Confidence 5567788888999987554 4555 668899999965444455554442 22 45555 99998
Q ss_pred EEEEec-CCeEEEEeCC--C-CCCCcceEEEecC-----CccceEEEEEcCCCcEEEEEecC----------CeEEEEEC
Q 024185 105 FAVAME-AGAIKLFDSR--S-YDKGPFDTFLVGG-----DTAEVCDIKFSNDGKSMLLTTTN----------NNIYVLDA 165 (271)
Q Consensus 105 l~~~~~-d~~i~i~d~~--~-~~~~~~~~~~~~~-----~~~~v~~~~~s~~~~~l~~~~~d----------~~i~~~d~ 165 (271)
|+.++. +..|+++++. + ++ ...+.. |...+.+++|+|||+.|++++.+ ..|++||+
T Consensus 94 la~~~~~~~~l~~~~~~~~g~~~-----~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~ 168 (662)
T 3azo_A 94 LVFTHFGDQRLYAFEPDAPGGAV-----PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPL 168 (662)
T ss_dssp EEEEBTTTCCEEEECTTSTTCCC-----CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEET
T ss_pred EEEEECCCCeEEEEcCCCCCCCC-----CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEEC
Confidence 776654 5677777776 3 43 223333 56788999999999999998876 58999999
Q ss_pred CC------CeEEEEee-cCCCCCceeeEEECCCCCEEEEecCC--------CcEEEEEcC-Cc---eeEEEecCCcceeE
Q 024185 166 YG------GEKRCGFS-LEPSPNTNTEATFTPDGQYVVSGSGD--------GTLHAWNIN-TR---NEVACWNGNIGVVA 226 (271)
Q Consensus 166 ~~------~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d--------g~i~iwd~~-~~---~~~~~~~~~~~~v~ 226 (271)
.+ ++. ..+. .+. ..+..++|||||++|+.++.+ ..|++||+. ++ +......+|...+.
T Consensus 169 ~~~~~~~~~~~-~~l~~~~~--~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~ 245 (662)
T 3azo_A 169 DGSAAADRSAV-RELSDDAH--RFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIA 245 (662)
T ss_dssp TSTTTTCGGGS-EESSCSCS--SEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEE
T ss_pred CCCccccCCce-eEEEecCC--CcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEc
Confidence 87 554 3343 222 347779999999999987754 379999998 56 44444455567899
Q ss_pred EEEEecCCcEEEEeC--C--eEEEEcCCCCCC
Q 024185 227 CLKWAPRRAMFVAAS--S--VLSFWIPNPSSN 254 (271)
Q Consensus 227 ~~~~s~~~~~l~~~~--~--~v~iw~~~~~~~ 254 (271)
.+.|+|||+++++++ + .|.+||+.+++.
T Consensus 246 ~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~ 277 (662)
T 3azo_A 246 QAEWAPDGSLIVATDRTGWWNLHRVDPATGAA 277 (662)
T ss_dssp EEEECTTSCEEEEECTTSSCEEEEECTTTCCE
T ss_pred ceEECCCCeEEEEECCCCCeEEEEEECCCCce
Confidence 999999999777776 4 677788766653
No 173
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.76 E-value=2.4e-17 Score=134.07 Aligned_cols=228 Identities=14% Similarity=0.041 Sum_probs=147.7
Q ss_pred cceeEEeeecc---eeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeE
Q 024185 10 ITQALLFARQN---IILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQG 86 (271)
Q Consensus 10 ~~~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~ 86 (271)
..+.+++.... ..+..++...+ ...+...++......+.|+|+|+. |+..+.++.+++||+.+++...
T Consensus 46 dG~~l~~~~~~~g~~~l~~~d~~~~----~~~~l~~~~~~~~~~~~~spdg~~-----l~~~~~~~~l~~~d~~~~~~~~ 116 (396)
T 3c5m_A 46 DGKKLLFAGDFDGNRNYYLLNLETQ----QAVQLTEGKGDNTFGGFISTDERA-----FFYVKNELNLMKVDLETLEEQV 116 (396)
T ss_dssp TSCEEEEEECTTSSCEEEEEETTTT----EEEECCCSSCBCTTTCEECTTSSE-----EEEEETTTEEEEEETTTCCEEE
T ss_pred CCCEEEEEEecCCCceEEEEECCCC----cEEEeecCCCCccccceECCCCCE-----EEEEEcCCcEEEEECCCCCcEE
Confidence 33455665432 35555555444 222222233222334789999998 6677778899999999888766
Q ss_pred EEecCCcce---------------------EEEcCCCCEEEEE-----ecCCeEEEEeCCCCCCCcceEEEecCCccceE
Q 024185 87 ILRLRGRPT---------------------VAFDQQGLVFAVA-----MEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVC 140 (271)
Q Consensus 87 ~~~~~~~~~---------------------~~~~~~~~~l~~~-----~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~ 140 (271)
....+.... ..|+|+++.++.. ..+..|++||+.+++. ..+..+...+.
T Consensus 117 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~-----~~~~~~~~~~~ 191 (396)
T 3c5m_A 117 IYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGEL-----EVIHQDTAWLG 191 (396)
T ss_dssp EEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCE-----EEEEEESSCEE
T ss_pred EEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcE-----EeeccCCcccc
Confidence 665443211 2457777766554 3456899999988763 22223556789
Q ss_pred EEEEcC-CCcEEEEEecC------CeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEecCC-----CcEEEEE
Q 024185 141 DIKFSN-DGKSMLLTTTN------NNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGD-----GTLHAWN 208 (271)
Q Consensus 141 ~~~~s~-~~~~l~~~~~d------~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd 208 (271)
.+.|+| +++.|+..+.+ ..|.+||+..++... +..+.....+..+.|+|||++|+.++.+ +.|++||
T Consensus 192 ~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~-l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d 270 (396)
T 3c5m_A 192 HPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRK-IKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKAN 270 (396)
T ss_dssp EEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEE-SSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEEC
T ss_pred cceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeE-eeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEE
Confidence 999999 88877776643 468999987665333 3222212247778999999988776543 4499999
Q ss_pred cCCceeEEEecCCcceeEEEEEec-CCcEEEEeC------------------CeEEEEcCCCCCCC
Q 024185 209 INTRNEVACWNGNIGVVACLKWAP-RRAMFVAAS------------------SVLSFWIPNPSSNS 255 (271)
Q Consensus 209 ~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~------------------~~v~iw~~~~~~~~ 255 (271)
+.+++........ . .. +.|+| ||+++++++ ..|.+||+.+++..
T Consensus 271 ~~~g~~~~l~~~~-~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~ 333 (396)
T 3c5m_A 271 PETLENEEVMVMP-P-CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQ 333 (396)
T ss_dssp TTTCCEEEEEECC-S-EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCC
T ss_pred CCCCCeEEeeeCC-C-CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceE
Confidence 9887754433221 2 23 89999 999887642 57999999887643
No 174
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.76 E-value=6.3e-16 Score=125.66 Aligned_cols=232 Identities=9% Similarity=0.013 Sum_probs=146.8
Q ss_pred ecceeEEeeecceeeEEEEeeccceeeEEEEEcccccceEEe-------------------eEEecCCchhhhhhhhhhc
Q 024185 9 PITQALLFARQNIILILLESLCGIYQCMIIEFFATSKGIRRG-------------------LFLSACLQLMIALCLVLLT 69 (271)
Q Consensus 9 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-------------------~~~s~~~~~~~~~~l~s~~ 69 (271)
|..+.+++...+..+..++...+... ..+..+...... ..++|+++.++........
T Consensus 90 pdg~~l~~~~~~~~l~~~d~~~~~~~----~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~ 165 (396)
T 3c5m_A 90 TDERAFFYVKNELNLMKVDLETLEEQ----VIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTN 165 (396)
T ss_dssp TTSSEEEEEETTTEEEEEETTTCCEE----EEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTC
T ss_pred CCCCEEEEEEcCCcEEEEECCCCCcE----EEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCC
Confidence 44456667766667777776554211 122222222222 4678888874321000125
Q ss_pred cCceEEEEEecCcceeEEEecC-CcceEEEcC-CCCEEEEEecC------CeEEEEeCCCCCCCcceEEEecCC--ccce
Q 024185 70 TALEYGIFVLMLASFQGILRLR-GRPTVAFDQ-QGLVFAVAMEA------GAIKLFDSRSYDKGPFDTFLVGGD--TAEV 139 (271)
Q Consensus 70 ~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~~-~~~~l~~~~~d------~~i~i~d~~~~~~~~~~~~~~~~~--~~~v 139 (271)
.+..|++||+.+++........ ....+.|+| +++.|+..+.+ ..|.+||+.+++. ..+..+ ...+
T Consensus 166 ~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-----~~l~~~~~~~~~ 240 (396)
T 3c5m_A 166 PTCRLIKVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNV-----RKIKEHAEGESC 240 (396)
T ss_dssp CCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCC-----EESSCCCTTEEE
T ss_pred CcceEEEEECCCCcEEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCce-----eEeeccCCCccc
Confidence 7789999999988866555433 355689999 78877776543 3688899876553 222222 2358
Q ss_pred EEEEEcCCCcEEEEEecC-----CeEEEEECCCCeEEEEeecCCCCCceeeEEECC-CCCEEEEec--------------
Q 024185 140 CDIKFSNDGKSMLLTTTN-----NNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTP-DGQYVVSGS-------------- 199 (271)
Q Consensus 140 ~~~~~s~~~~~l~~~~~d-----~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~-------------- 199 (271)
..++|+|||++|+.++.+ +.|++||+.+++........ . .. +.|+| ||+++++++
T Consensus 241 ~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~-~---~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~ 315 (396)
T 3c5m_A 241 THEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMP-P---CS-HLMSNFDGSLMVGDGCDAPVDVADADSYN 315 (396)
T ss_dssp EEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECC-S---EE-EEEECSSSSEEEEEECCC----------C
T ss_pred cceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCC-C---CC-CCccCCCCceEEEecCCcceeeccccccc
Confidence 889999999988877653 45999999888754433221 1 33 88999 999888754
Q ss_pred --CCCcEEEEEcCCceeEEEecCCcc-----------eeEEEEEecCCcEEEEeC---Ce--EEEEcCCCCCCC
Q 024185 200 --GDGTLHAWNINTRNEVACWNGNIG-----------VVACLKWAPRRAMFVAAS---SV--LSFWIPNPSSNS 255 (271)
Q Consensus 200 --~dg~i~iwd~~~~~~~~~~~~~~~-----------~v~~~~~s~~~~~l~~~~---~~--v~iw~~~~~~~~ 255 (271)
.++.|++||+.+++... +..+.. .+..++|+|||+.|+.++ +. +...++.++...
T Consensus 316 ~~~~~~i~~~d~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~~~~~~~ 388 (396)
T 3c5m_A 316 IENDPFLYVLNTKAKSAQK-LCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADVPESYKH 388 (396)
T ss_dssp CCCCCEEEEEETTTTBCCE-EEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCTTCC-
T ss_pred cCCCCcEEEEecccCceEE-ccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEEEcccccc
Confidence 24689999998877543 433433 256789999999887765 44 555555555443
No 175
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.75 E-value=4.7e-16 Score=123.77 Aligned_cols=205 Identities=13% Similarity=0.100 Sum_probs=151.1
Q ss_pred ccceEEeeEEecCCchhhhhhhhhhccC------------------------ceEEEEEecCcceeEEEecC---CcceE
Q 024185 44 SKGIRRGLFLSACLQLMIALCLVLLTTA------------------------LEYGIFVLMLASFQGILRLR---GRPTV 96 (271)
Q Consensus 44 ~~~~v~~~~~s~~~~~~~~~~l~s~~~d------------------------g~i~iwd~~~~~~~~~~~~~---~~~~~ 96 (271)
.-+.+.+++++|+|+. +++...+ +.|.+||.++++.+..+... ....+
T Consensus 22 ~l~~v~~va~d~~G~l-----~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gi 96 (329)
T 3fvz_A 22 LPGQVSGVALDSKNNL-----VIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGL 96 (329)
T ss_dssp CCSCEEEEEECTTCCE-----EEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEE
T ss_pred ecCCceEEEECCCCCE-----EEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEE
Confidence 3467888999999987 5555555 47999999989887666432 34559
Q ss_pred EEcCCCCEEEEEecCCeEEEEeCCCCCCCcceEEEe---------cCCccceEEEEEcC-CCcEEEEEe-cCCeEEEEEC
Q 024185 97 AFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLV---------GGDTAEVCDIKFSN-DGKSMLLTT-TNNNIYVLDA 165 (271)
Q Consensus 97 ~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~---------~~~~~~v~~~~~s~-~~~~l~~~~-~d~~i~~~d~ 165 (271)
+++|+|+++++...++.|+.||...... . ...+ .++......++++| ++..+++.+ .++.|++||
T Consensus 97 a~d~~g~l~v~d~~~~~v~~~~~~g~~~-~--~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~- 172 (329)
T 3fvz_A 97 SIDTDGNYWVTDVALHQVFKLDPHSKEG-P--LLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS- 172 (329)
T ss_dssp EECTTSCEEEEETTTTEEEEECTTCSSC-C--SEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-
T ss_pred EECCCCCEEEEECCCCEEEEEeCCCCeE-E--EEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-
Confidence 9999999888888889999999865421 1 2222 23445789999999 788777776 689999999
Q ss_pred CCCeEEEEeecCCC--------CCceeeEEECCC-CCEEEEecCCCcEEEEEcCCceeEEEec--CCcceeEEEEEecCC
Q 024185 166 YGGEKRCGFSLEPS--------PNTNTEATFTPD-GQYVVSGSGDGTLHAWNINTRNEVACWN--GNIGVVACLKWAPRR 234 (271)
Q Consensus 166 ~~~~~~~~~~~~~~--------~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~--~~~~~v~~~~~s~~~ 234 (271)
.+++.+..+..... -.....++++|+ ++++++...++.|++||..+++.+..+. .+...+.+++|+| +
T Consensus 173 ~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g 251 (329)
T 3fvz_A 173 PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-G 251 (329)
T ss_dssp TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-T
T ss_pred CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-C
Confidence 66777766643221 123778999999 7777777888999999998899888873 4556788999999 4
Q ss_pred cEEEEeC---------CeEEEEcCCCCCCCcCC
Q 024185 235 AMFVAAS---------SVLSFWIPNPSSNSTDE 258 (271)
Q Consensus 235 ~~l~~~~---------~~v~iw~~~~~~~~~~~ 258 (271)
..+.+.+ ..+++|+..+++.....
T Consensus 252 ~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~ 284 (329)
T 3fvz_A 252 FLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVF 284 (329)
T ss_dssp EEEEEECCCCTTCSCCCCEEEEETTTCCEEEEE
T ss_pred EEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEE
Confidence 4333332 36999999888766543
No 176
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.74 E-value=2.2e-15 Score=117.37 Aligned_cols=195 Identities=11% Similarity=0.113 Sum_probs=142.3
Q ss_pred ccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEec--------CCcceEEE-cCCCCEEEEEec-CCe
Q 024185 44 SKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILRL--------RGRPTVAF-DQQGLVFAVAME-AGA 113 (271)
Q Consensus 44 ~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--------~~~~~~~~-~~~~~~l~~~~~-d~~ 113 (271)
+-.....+++++++.. +++...++.|.+||.+ ++.+..+.. .....+++ .++++++++... ++.
T Consensus 28 ~~~~p~~v~~~~~g~l-----~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~ 101 (286)
T 1q7f_A 28 QFTEPSGVAVNAQNDI-----IVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQ 101 (286)
T ss_dssp CBSCEEEEEECTTCCE-----EEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCE
T ss_pred ccCCCceEEECCCCCE-----EEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCE
Confidence 3456778999999986 6677788999999986 665655532 12445888 467766655543 789
Q ss_pred EEEEeCCCCCCCcceEEEec-CCccceEEEEEcCCCcEEEEEecCCeEEEEECCCCeEEEEeecCCCCCceeeEEECCCC
Q 024185 114 IKLFDSRSYDKGPFDTFLVG-GDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDG 192 (271)
Q Consensus 114 i~i~d~~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 192 (271)
|.+||. +++. ...+. .+...+..++++|+|+.+++...++.|.+||. +++.+..+........+..++++|+|
T Consensus 102 i~~~d~-~g~~----~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~p~~i~~~~~g 175 (286)
T 1q7f_A 102 IQIYNQ-YGQF----VRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQ-NGNVLHKFGCSKHLEFPNGVVVNDKQ 175 (286)
T ss_dssp EEEECT-TSCE----EEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECT-TSCEEEEEECTTTCSSEEEEEECSSS
T ss_pred EEEECC-CCcE----EEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcC-CCCEEEEeCCCCccCCcEEEEECCCC
Confidence 999994 4442 22232 33457899999999997777777899999995 46666665432222347889999999
Q ss_pred CEEEEecCCCcEEEEEcCCceeEEEecCC--cceeEEEEEecCCcEEEEeC--C-eEEEEcCCC
Q 024185 193 QYVVSGSGDGTLHAWNINTRNEVACWNGN--IGVVACLKWAPRRAMFVAAS--S-VLSFWIPNP 251 (271)
Q Consensus 193 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~~~~--~-~v~iw~~~~ 251 (271)
+++++...++.|++||. +++.+..+..+ ...+.+++++|+|+++++.. + .|.+||.+.
T Consensus 176 ~l~v~~~~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g 238 (286)
T 1q7f_A 176 EIFISDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDG 238 (286)
T ss_dssp EEEEEEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTS
T ss_pred CEEEEECCCCEEEEEcC-CCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCC
Confidence 98888888899999997 56666666443 35678999999999888875 4 899999654
No 177
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.74 E-value=4.8e-16 Score=136.06 Aligned_cols=208 Identities=10% Similarity=-0.032 Sum_probs=141.5
Q ss_pred ccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEE-ecCCcceEEEcCCCCEEEEEecCCe---------
Q 024185 44 SKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGIL-RLRGRPTVAFDQQGLVFAVAMEAGA--------- 113 (271)
Q Consensus 44 ~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~d~~--------- 113 (271)
+...+..+.|||||+.+++..--.|+....|++||+++++.+... .......++|+|||+.|+.++.++.
T Consensus 123 ~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~ 202 (710)
T 2xdw_A 123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTET 202 (710)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCC
T ss_pred CCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCcccceEEEEeCCCEEEEEEECCcccccccccc
Confidence 334678899999999843310001222238999999999876543 2333566999999999999887765
Q ss_pred -------EEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEec-----CCeEEEEECCC------Ce-EEEEe
Q 024185 114 -------IKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTT-----NNNIYVLDAYG------GE-KRCGF 174 (271)
Q Consensus 114 -------i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-----d~~i~~~d~~~------~~-~~~~~ 174 (271)
|++|++.+++...........|...+..+.|+|||++|+..+. +..|++||+.+ ++ ....+
T Consensus 203 ~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l 282 (710)
T 2xdw_A 203 STNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKL 282 (710)
T ss_dssp CCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEE
T ss_pred ccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEe
Confidence 9999998765311122233334556889999999999988765 57899999976 43 34555
Q ss_pred ecCCCCCceeeEEECCCCCEEEEecCC----CcEEEEEcCCcee--EEEecCCcc--eeEEEEEecCCcEEEEeC--C--
Q 024185 175 SLEPSPNTNTEATFTPDGQYVVSGSGD----GTLHAWNINTRNE--VACWNGNIG--VVACLKWAPRRAMFVAAS--S-- 242 (271)
Q Consensus 175 ~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~iwd~~~~~~--~~~~~~~~~--~v~~~~~s~~~~~l~~~~--~-- 242 (271)
..+... +. ..|+|+|+.++..+.. +.|.+||+.+++. ...+..|.. .+..++|++++.++++.. +
T Consensus 283 ~~~~~~--~~-~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~ 359 (710)
T 2xdw_A 283 IDNFEG--EY-DYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKN 359 (710)
T ss_dssp ECSSSS--CE-EEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEE
T ss_pred eCCCCc--EE-EEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEE
Confidence 544433 33 3588999987766543 3699999987642 344444433 688899998777777775 4
Q ss_pred eEEEEcCCCCCC
Q 024185 243 VLSFWIPNPSSN 254 (271)
Q Consensus 243 ~v~iw~~~~~~~ 254 (271)
.|.+|++.+++.
T Consensus 360 ~l~~~~~~~g~~ 371 (710)
T 2xdw_A 360 TLQLHDLATGAL 371 (710)
T ss_dssp EEEEEETTTCCE
T ss_pred EEEEEECCCCCE
Confidence 477888866653
No 178
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.73 E-value=3.1e-15 Score=118.99 Aligned_cols=226 Identities=9% Similarity=-0.021 Sum_probs=157.3
Q ss_pred eeEEeeec-ceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEec
Q 024185 12 QALLFARQ-NIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILRL 90 (271)
Q Consensus 12 ~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 90 (271)
.++.++.. ++.+..++..++.. +..+.. ......++++++++. +++...++.|.+||.++++....+..
T Consensus 54 ~~lyv~~~~~~~v~viD~~t~~~----~~~i~~-~~~p~~i~~~~~g~l-----yv~~~~~~~v~~iD~~t~~~~~~i~~ 123 (328)
T 3dsm_A 54 GIGWIVVNNSHVIFAIDINTFKE----VGRITG-FTSPRYIHFLSDEKA-----YVTQIWDYRIFIINPKTYEITGYIEC 123 (328)
T ss_dssp TEEEEEEGGGTEEEEEETTTCCE----EEEEEC-CSSEEEEEEEETTEE-----EEEEBSCSEEEEEETTTTEEEEEEEC
T ss_pred CEEEEEEcCCCEEEEEECcccEE----EEEcCC-CCCCcEEEEeCCCeE-----EEEECCCCeEEEEECCCCeEEEEEEc
Confidence 44444443 57788888776632 222332 345667899899864 44555789999999999988877764
Q ss_pred CC-------cceEEEcCCCCEEEEEe--cCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEecC----
Q 024185 91 RG-------RPTVAFDQQGLVFAVAM--EAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTN---- 157 (271)
Q Consensus 91 ~~-------~~~~~~~~~~~~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---- 157 (271)
.. ...+++ +++.++++. .++.|.++|..+++. ...+.. ......++++|+|++++++..+
T Consensus 124 g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~----~~~i~~-g~~p~~i~~~~dG~l~v~~~~~~~~~ 196 (328)
T 3dsm_A 124 PDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKV----VDELTI-GIQPTSLVMDKYNKMWTITDGGYEGS 196 (328)
T ss_dssp TTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEE----EEEEEC-SSCBCCCEECTTSEEEEEBCCBCTTC
T ss_pred CCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeE----EEEEEc-CCCccceEEcCCCCEEEEECCCccCC
Confidence 43 334777 455555554 488999999998774 222222 2345678999999976666544
Q ss_pred ------CeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCCceeEEE--ecCCcceeEEEE
Q 024185 158 ------NNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVAC--WNGNIGVVACLK 229 (271)
Q Consensus 158 ------~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~--~~~~~~~v~~~~ 229 (271)
+.|.++|..+++....+..... .....++++|++++++++.. .|.+||..+++.... +........+++
T Consensus 197 ~~~~~~~~v~~id~~t~~v~~~~~~~~g-~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~ 273 (328)
T 3dsm_A 197 PYGYEAPSLYRIDAETFTVEKQFKFKLG-DWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLT 273 (328)
T ss_dssp SSCBCCCEEEEEETTTTEEEEEEECCTT-CCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEE
T ss_pred ccccCCceEEEEECCCCeEEEEEecCCC-CCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEE
Confidence 7899999999998877754322 23778999999999888765 899999988776321 222235678999
Q ss_pred Eec-CCcEEEEe----C--CeEEEEcCCCCCCCcCC
Q 024185 230 WAP-RRAMFVAA----S--SVLSFWIPNPSSNSTDE 258 (271)
Q Consensus 230 ~s~-~~~~l~~~----~--~~v~iw~~~~~~~~~~~ 258 (271)
++| +++++++. . +.|.+||.+ ++.....
T Consensus 274 vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i 308 (328)
T 3dsm_A 274 VNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEF 308 (328)
T ss_dssp ECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEE
T ss_pred EcCCCCeEEEEcccccccCCEEEEECCC-CCEEEEE
Confidence 999 67777776 3 789999998 6655443
No 179
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.73 E-value=1.5e-15 Score=117.69 Aligned_cols=184 Identities=12% Similarity=0.044 Sum_probs=146.5
Q ss_pred hhhhccCceEEEEEecCcceeEEEecCC---cceEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcceEEEecCC-ccceE
Q 024185 65 LVLLTTALEYGIFVLMLASFQGILRLRG---RPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGD-TAEVC 140 (271)
Q Consensus 65 l~s~~~dg~i~iwd~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~-~~~v~ 140 (271)
+++++.++.|++||.++++.+..+..+. ...+.++|+|++++ +.++.|+.||. +++. ...+..+ ...+.
T Consensus 8 lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~----~W~~~~~~~~~~~ 80 (276)
T 3no2_A 8 LVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRE----LWNIAAPAGCEMQ 80 (276)
T ss_dssp EEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCE----EEEEECCTTCEEE
T ss_pred EEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCE----EEEEcCCCCcccc
Confidence 6788999999999999999999998764 56699999999888 44788999999 6665 4555443 34688
Q ss_pred EEEEcCCCcEEEEEec-CCeEEEEECCCCeEEEEeecCCCC----CceeeEEECCCCCEEEEecCCCcEEEEEcCCceeE
Q 024185 141 DIKFSNDGKSMLLTTT-NNNIYVLDAYGGEKRCGFSLEPSP----NTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEV 215 (271)
Q Consensus 141 ~~~~s~~~~~l~~~~~-d~~i~~~d~~~~~~~~~~~~~~~~----~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 215 (271)
++.+.|+|+.+++.+. ++.+..+|. +++.+..+...... .....++..++|+++++...++.|..||.. |+.+
T Consensus 81 ~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~ 158 (276)
T 3no2_A 81 TARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLL 158 (276)
T ss_dssp EEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEE
T ss_pred ccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEE
Confidence 9999999999999887 788888884 78877776543210 124456789999999999999999999987 9999
Q ss_pred EEecCCcceeEEEEEecCCcEEEEeC--CeEEEEcCCCCCCCcCC
Q 024185 216 ACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNPSSNSTDE 258 (271)
Q Consensus 216 ~~~~~~~~~v~~~~~s~~~~~l~~~~--~~v~iw~~~~~~~~~~~ 258 (271)
.++... ..+.++...++|+++++++ +.|..+|.++++.+-+.
T Consensus 159 w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~ 202 (276)
T 3no2_A 159 NSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRV 202 (276)
T ss_dssp EEEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEE
T ss_pred EEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEe
Confidence 988754 3456778899999888876 57999999988774433
No 180
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.73 E-value=2.6e-15 Score=115.81 Aligned_cols=226 Identities=11% Similarity=0.012 Sum_probs=150.0
Q ss_pred eeEEe-e-ecceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEe
Q 024185 12 QALLF-A-RQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILR 89 (271)
Q Consensus 12 ~~l~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 89 (271)
..+.+ + ..++.+..++...... ......+......++++++++. +++.. ++.|..||.+.... ..+.
T Consensus 35 g~l~v~~~~~~~~i~~~~~~~~~~----~~~~~~~~~~p~~i~~~~~g~l-----~v~~~-~~~i~~~d~~~~~~-~~~~ 103 (270)
T 1rwi_B 35 GNVYVTSEGMYGRVVKLATGSTGT----TVLPFNGLYQPQGLAVDGAGTV-----YVTDF-NNRVVTLAAGSNNQ-TVLP 103 (270)
T ss_dssp CCEEEEECSSSCEEEEECC---------EECCCCSCCSCCCEEECTTCCE-----EEEET-TTEEEEECTTCSCC-EECC
T ss_pred CCEEEEccCCCCcEEEecCCCccc----ceEeeCCcCCcceeEECCCCCE-----EEEcC-CCEEEEEeCCCceE-eeee
Confidence 44555 4 3456676666433311 1111223345677999999885 34444 88999999876543 2332
Q ss_pred c---CCcceEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEecCCeEEEEECC
Q 024185 90 L---RGRPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAY 166 (271)
Q Consensus 90 ~---~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~ 166 (271)
. .....++++++|+.+++...++.|.+|+..+... ..........+.+++++|+|+.+++...++.|.+||..
T Consensus 104 ~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~----~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~ 179 (270)
T 1rwi_B 104 FDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQ----TVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAE 179 (270)
T ss_dssp CCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSC----EECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTT
T ss_pred cCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCcee----EeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecC
Confidence 2 2345699999999777767788999997655442 22222233467889999999866666678899999987
Q ss_pred CCeEEEEeecCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCCceeEEEecCCcceeEEEEEecCCcEEEEeC--CeE
Q 024185 167 GGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVL 244 (271)
Q Consensus 167 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~~v 244 (271)
............ ..+..++++++|+++++...++.|.+||............+...+.+++++|+|+++++.. +.|
T Consensus 180 ~~~~~~~~~~~~--~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v 257 (270)
T 1rwi_B 180 SNNQVVLPFTDI--TAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRV 257 (270)
T ss_dssp TCCEEECCCSSC--CSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEE
T ss_pred CCceEeecccCC--CCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCCEE
Confidence 765443222221 3478899999998878777788999999876544332223335688999999999777765 889
Q ss_pred EEEcCCCCCC
Q 024185 245 SFWIPNPSSN 254 (271)
Q Consensus 245 ~iw~~~~~~~ 254 (271)
+++++...+.
T Consensus 258 ~~~~~~~~~~ 267 (270)
T 1rwi_B 258 VKLTSLEHHH 267 (270)
T ss_dssp EEECCCGGGS
T ss_pred EEEcCCCccc
Confidence 9999876554
No 181
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.73 E-value=2.1e-15 Score=132.00 Aligned_cols=231 Identities=9% Similarity=-0.036 Sum_probs=156.7
Q ss_pred ecceeEEeeecce-----eeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCce----------
Q 024185 9 PITQALLFARQNI-----ILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALE---------- 73 (271)
Q Consensus 9 ~~~~~l~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~---------- 73 (271)
|..+.++++.+.+ .+..++...+..... .... ..+..++|+|||+. |+.++.++.
T Consensus 134 PDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~---~~~~--~~~~~~~wspDg~~-----l~~~~~~~~~~~~~~~~~~ 203 (710)
T 2xdw_A 134 EDGEYFAYGLSASGSDWVTIKFMKVDGAKELPD---VLER--VKFSCMAWTHDGKG-----MFYNAYPQQDGKSDGTETS 203 (710)
T ss_dssp TTSSEEEEEEEETTCSCEEEEEEETTTTEEEEE---EEEE--ECSCCEEECTTSSE-----EEEEECCCCSSCCSSSCCC
T ss_pred CCCCEEEEEEcCCCCceEEEEEEECCCCCCCcc---cccC--cccceEEEEeCCCE-----EEEEEECCccccccccccc
Confidence 5556777775432 677777666632211 1111 12566899999998 555555544
Q ss_pred ------EEEEEecCccee--EEEec--CC--cceEEEcCCCCEEEEEec-----CCeEEEEeCCC------CCCCcceEE
Q 024185 74 ------YGIFVLMLASFQ--GILRL--RG--RPTVAFDQQGLVFAVAME-----AGAIKLFDSRS------YDKGPFDTF 130 (271)
Q Consensus 74 ------i~iwd~~~~~~~--~~~~~--~~--~~~~~~~~~~~~l~~~~~-----d~~i~i~d~~~------~~~~~~~~~ 130 (271)
|++|++.+++.. ..+.. +. ...+.|+|||++|+.++. +..|++||+.+ +.. ...
T Consensus 204 ~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~---~~~ 280 (710)
T 2xdw_A 204 TNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGIL---KWV 280 (710)
T ss_dssp CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSC---CCE
T ss_pred cCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCcc---ceE
Confidence 999999887632 23333 22 345899999999988764 56899999976 421 123
Q ss_pred EecCCccceEEEEEcCCCcEEEEEec----CCeEEEEECCCCeE--EEEeecCCCCCceeeEEECCCCCEEEEecCCC--
Q 024185 131 LVGGDTAEVCDIKFSNDGKSMLLTTT----NNNIYVLDAYGGEK--RCGFSLEPSPNTNTEATFTPDGQYVVSGSGDG-- 202 (271)
Q Consensus 131 ~~~~~~~~v~~~~~s~~~~~l~~~~~----d~~i~~~d~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-- 202 (271)
.+..+...+.. .|+|+|+.|+..+. ++.|.+||+.+++. ...+..+.....+..+.|++++.++++...++
T Consensus 281 ~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~ 359 (710)
T 2xdw_A 281 KLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKN 359 (710)
T ss_dssp EEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEE
T ss_pred EeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEE
Confidence 33445555554 58899998877765 34699999987642 23444443323477889988888888888887
Q ss_pred cEEEEEcCCceeEEEecCCcceeEEEEEecCCcEEEEe--C----CeEEEEcCCCCC
Q 024185 203 TLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAA--S----SVLSFWIPNPSS 253 (271)
Q Consensus 203 ~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~--~----~~v~iw~~~~~~ 253 (271)
.|.+||+.+++.+..+..+.+.+..++++|++..++.. + +++..||+.+++
T Consensus 360 ~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 360 TLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred EEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 46677877788888887778889999999998755533 3 679999998876
No 182
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.72 E-value=6.7e-15 Score=118.53 Aligned_cols=179 Identities=11% Similarity=0.094 Sum_probs=120.3
Q ss_pred eEEeeEEecCCchhhhhhhhhhc--cCceEEEEEecCcceeEE-EecCCcceEEEcCCC-CEEEEEecCCeEEEEeC---
Q 024185 47 IRRGLFLSACLQLMIALCLVLLT--TALEYGIFVLMLASFQGI-LRLRGRPTVAFDQQG-LVFAVAMEAGAIKLFDS--- 119 (271)
Q Consensus 47 ~v~~~~~s~~~~~~~~~~l~s~~--~dg~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~~-~~l~~~~~d~~i~i~d~--- 119 (271)
....++++|+|++ ++++. .++.|.+||+++++.+.. +.......+.+.|++ ..+++.+.||.+.+|+.
T Consensus 109 ~p~~i~~spdg~~-----l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~ 183 (361)
T 2oiz_A 109 YDGLFRQTTDGKF-----IVLQNASPATSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINLGED 183 (361)
T ss_dssp CGGGEEECTTSSE-----EEEEEESSSEEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEEECTT
T ss_pred CcceEEECCCCCE-----EEEECCCCCCeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEEECCC
Confidence 3456899999998 44443 368999999999988877 554332223334433 23333344444444433
Q ss_pred ---------------------------------------------CCCCCCcceEEEecC--------CccceEEEEEcC
Q 024185 120 ---------------------------------------------RSYDKGPFDTFLVGG--------DTAEVCDIKFSN 146 (271)
Q Consensus 120 ---------------------------------------------~~~~~~~~~~~~~~~--------~~~~v~~~~~s~ 146 (271)
..........+.+.. .......++|+|
T Consensus 184 g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~ 263 (361)
T 2oiz_A 184 GKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHR 263 (361)
T ss_dssp SSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEET
T ss_pred CcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEec
Confidence 322210000010000 001111278999
Q ss_pred CCcEEEEEec-----------CCeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCCc--e
Q 024185 147 DGKSMLLTTT-----------NNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTR--N 213 (271)
Q Consensus 147 ~~~~l~~~~~-----------d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~--~ 213 (271)
+++.++++.. .+.|.+||+.+++.+.++..+. ..+++|+|||++|++++. +.|.+||..++ +
T Consensus 264 dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~----p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~ 338 (361)
T 2oiz_A 264 ASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD----ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPK 338 (361)
T ss_dssp TTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT----CCEEEEETTTTEEEEECS-SCEEEEECSSSSCE
T ss_pred CCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC----eeEEEECCCCCEEEEeCC-CeEEEEECCCCcce
Confidence 9888877653 3589999999999999887665 667999999999998887 99999999999 9
Q ss_pred eEEEecCCcceeEEEEEecCCc
Q 024185 214 EVACWNGNIGVVACLKWAPRRA 235 (271)
Q Consensus 214 ~~~~~~~~~~~v~~~~~s~~~~ 235 (271)
.+..+..+......++++|+|+
T Consensus 339 ~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 339 LLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp EEEEETTSCSSEEEEEECCCSC
T ss_pred eeEEeccCCCCcEEEEecCCCC
Confidence 9999866777778999999986
No 183
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.72 E-value=1.2e-15 Score=119.50 Aligned_cols=200 Identities=12% Similarity=0.096 Sum_probs=139.4
Q ss_pred cccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEecC--CcceEEEcCCCCEEEEEecCCeEEEEe
Q 024185 41 FATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILRLR--GRPTVAFDQQGLVFAVAMEAGAIKLFD 118 (271)
Q Consensus 41 ~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~d~~i~i~d 118 (271)
+..+.....+++|+|+++.+ ++++..++.|..||.+++ ...+..+ .+..++++|+|+++++...++.|.+||
T Consensus 23 l~~~~~~~eg~~~d~~g~~l----~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d 96 (296)
T 3e5z_A 23 LADGFTWTEGPVYVPARSAV----IFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQR 96 (296)
T ss_dssp EECCCSSEEEEEEEGGGTEE----EEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEEC
T ss_pred EecCCccccCCeEeCCCCEE----EEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEc
Confidence 33444556789999999832 557788999999999877 4455443 355699999999877776678999999
Q ss_pred CCCCCCCcceEEEecCC-ccceEEEEEcCCCcEEEEE----e-------------cCCeEEEEECCCCeEEEEeecCCCC
Q 024185 119 SRSYDKGPFDTFLVGGD-TAEVCDIKFSNDGKSMLLT----T-------------TNNNIYVLDAYGGEKRCGFSLEPSP 180 (271)
Q Consensus 119 ~~~~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~----~-------------~d~~i~~~d~~~~~~~~~~~~~~~~ 180 (271)
..+++...+.. ...+. ...+..++++|+|+++++. + ..+.|..++.. ++. ..+....
T Consensus 97 ~~~g~~~~~~~-~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~-~~~~~~~-- 171 (296)
T 3e5z_A 97 EPGGEWESIAD-SFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTL-SAPIRDR-- 171 (296)
T ss_dssp STTCCEEEEEC-EETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCE-EEEECCC--
T ss_pred CCCCcEEEEee-ccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCE-EEeecCC--
Confidence 97776311100 01111 1346789999999987763 2 13467777655 443 3333232
Q ss_pred CceeeEEECCCCCEEEEecCCCcEEEEEcC-Ccee---EEEecCCcceeEEEEEecCCcEEEEeCCeEEEEcCCC
Q 024185 181 NTNTEATFTPDGQYVVSGSGDGTLHAWNIN-TRNE---VACWNGNIGVVACLKWAPRRAMFVAASSVLSFWIPNP 251 (271)
Q Consensus 181 ~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~-~~~~---~~~~~~~~~~v~~~~~s~~~~~l~~~~~~v~iw~~~~ 251 (271)
.....++|+|+++.+++.+.++.|.+||+. +++. ...+..+...+.+++++++|+++++.++.|.+|+.+.
T Consensus 172 ~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~v~~~~~~g 246 (296)
T 3e5z_A 172 VKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASAGDGVHVLTPDG 246 (296)
T ss_dssp SSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEETTEEEEECTTS
T ss_pred CCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEcCCeEEEECCCC
Confidence 236789999999988777778999999997 4544 2333334556778999999998877778899999874
No 184
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.71 E-value=6.5e-15 Score=114.07 Aligned_cols=211 Identities=10% Similarity=0.020 Sum_probs=160.5
Q ss_pred eeEEeeecceeeEEEEeeccceeeEEEEEccccc-ceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEec
Q 024185 12 QALLFARQNIILILLESLCGIYQCMIIEFFATSK-GIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILRL 90 (271)
Q Consensus 12 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 90 (271)
+.++.+..++.+..++..++ ..+..+..+. ..+.++.++|+|+. ++ +.++.|+.||. +++.+..+..
T Consensus 6 ~~lv~~~~~~~v~~~d~~tG----~~~w~~~~~~~~~~~~~~~~pdG~i-----lv--s~~~~V~~~d~-~G~~~W~~~~ 73 (276)
T 3no2_A 6 HLLVGGSGWNKIAIINKDTK----EIVWEYPLEKGWECNSVAATKAGEI-----LF--SYSKGAKMITR-DGRELWNIAA 73 (276)
T ss_dssp EEEEECTTCSEEEEEETTTT----EEEEEEECCTTCCCCEEEECTTSCE-----EE--ECBSEEEEECT-TSCEEEEEEC
T ss_pred cEEEeeCCCCEEEEEECCCC----eEEEEeCCCccCCCcCeEECCCCCE-----EE--eCCCCEEEECC-CCCEEEEEcC
Confidence 34444566889999988777 4444455554 46778999999997 55 45788999999 8998888876
Q ss_pred C---CcceEEEcCCCCEEEEEec-CCeEEEEeCCCCCCCcceEEEec----CCccceEEEEEcCCCcEEEEEecCCeEEE
Q 024185 91 R---GRPTVAFDQQGLVFAVAME-AGAIKLFDSRSYDKGPFDTFLVG----GDTAEVCDIKFSNDGKSMLLTTTNNNIYV 162 (271)
Q Consensus 91 ~---~~~~~~~~~~~~~l~~~~~-d~~i~i~d~~~~~~~~~~~~~~~----~~~~~v~~~~~s~~~~~l~~~~~d~~i~~ 162 (271)
+ .+..+.+.++|+.+++.+. ++.+..+|. +++. +..+.+. ++......++..++|+++++...++.|..
T Consensus 74 ~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~--l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~ 150 (276)
T 3no2_A 74 PAGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEV--LSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVRE 150 (276)
T ss_dssp CTTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCE--EEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEE
T ss_pred CCCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCE--EEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEE
Confidence 4 3445889999999999887 778888886 4443 2233322 22234556678999999999999999999
Q ss_pred EECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCCceeEEEecCCc------ceeEEEEEecCCcE
Q 024185 163 LDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNI------GVVACLKWAPRRAM 236 (271)
Q Consensus 163 ~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~------~~v~~~~~s~~~~~ 236 (271)
||.. |+.+.++..... ..++...++|+.+++++.++.|..+|..+++.+.++..+. ..+..+...++|++
T Consensus 151 ~d~~-G~~~w~~~~~~~---~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i 226 (276)
T 3no2_A 151 IAPN-GQLLNSVKLSGT---PFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGL 226 (276)
T ss_dssp ECTT-SCEEEEEECSSC---CCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCE
T ss_pred ECCC-CCEEEEEECCCC---ccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCE
Confidence 9987 999988876533 4567888999999999988899999999999999885432 23788889999998
Q ss_pred EEEeC
Q 024185 237 FVAAS 241 (271)
Q Consensus 237 l~~~~ 241 (271)
+++..
T Consensus 227 ~v~~~ 231 (276)
T 3no2_A 227 YICNW 231 (276)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 88873
No 185
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.71 E-value=9e-15 Score=116.29 Aligned_cols=219 Identities=8% Similarity=-0.026 Sum_probs=153.0
Q ss_pred ceeeEEEEeeccceeeEEEEEcc-----cccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEecC-Cc
Q 024185 20 NIILILLESLCGIYQCMIIEFFA-----TSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILRLR-GR 93 (271)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~ 93 (271)
++.+..++..++..... .+. ........+.+.. ++. +++...++.|.+||.++++.+.++... ..
T Consensus 16 ~~~l~~~d~~t~~~~~~---i~~~~n~~~lg~~~~~i~~~~-~~l-----yv~~~~~~~v~viD~~t~~~~~~i~~~~~p 86 (328)
T 3dsm_A 16 NATLSYYDPATCEVENE---VFYRANGFKLGDVAQSMVIRD-GIG-----WIVVNNSHVIFAIDINTFKEVGRITGFTSP 86 (328)
T ss_dssp CBEEEEEETTTTEEECS---HHHHHHSSCCBSCEEEEEEET-TEE-----EEEEGGGTEEEEEETTTCCEEEEEECCSSE
T ss_pred CceEEEEECCCCEEhhh---hHhhhcCcccCccceEEEEEC-CEE-----EEEEcCCCEEEEEECcccEEEEEcCCCCCC
Confidence 67888888776632211 011 1112345566643 343 445567899999999999998888644 34
Q ss_pred ceEEEcCCCCEEEEEe-cCCeEEEEeCCCCCCCcceEEEecC---CccceEEEEEcCCCcEEEEEe--cCCeEEEEECCC
Q 024185 94 PTVAFDQQGLVFAVAM-EAGAIKLFDSRSYDKGPFDTFLVGG---DTAEVCDIKFSNDGKSMLLTT--TNNNIYVLDAYG 167 (271)
Q Consensus 94 ~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~---~~~~v~~~~~s~~~~~l~~~~--~d~~i~~~d~~~ 167 (271)
..++++++++ ++++. .++.|.+||..+++. ........ +......+++ . +..++++. .++.|.++|..+
T Consensus 87 ~~i~~~~~g~-lyv~~~~~~~v~~iD~~t~~~--~~~i~~g~~~~~~~~p~~i~~-~-~~~lyv~~~~~~~~v~viD~~t 161 (328)
T 3dsm_A 87 RYIHFLSDEK-AYVTQIWDYRIFIINPKTYEI--TGYIECPDMDMESGSTEQMVQ-Y-GKYVYVNCWSYQNRILKIDTET 161 (328)
T ss_dssp EEEEEEETTE-EEEEEBSCSEEEEEETTTTEE--EEEEECTTCCTTTCBCCCEEE-E-TTEEEEEECTTCCEEEEEETTT
T ss_pred cEEEEeCCCe-EEEEECCCCeEEEEECCCCeE--EEEEEcCCccccCCCcceEEE-E-CCEEEEEcCCCCCEEEEEECCC
Confidence 5599988885 55554 789999999998764 22222221 0114556677 3 44555554 488999999999
Q ss_pred CeEEEEeecCCCCCceeeEEECCCCCEEEEecCC----------CcEEEEEcCCceeEEEecCC-cceeEEEEEecCCcE
Q 024185 168 GEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGD----------GTLHAWNINTRNEVACWNGN-IGVVACLKWAPRRAM 236 (271)
Q Consensus 168 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----------g~i~iwd~~~~~~~~~~~~~-~~~v~~~~~s~~~~~ 236 (271)
++.+..+..... ...+.++|+|++++++..+ +.|.++|..+++....+... ......++|+|+++.
T Consensus 162 ~~~~~~i~~g~~---p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~ 238 (328)
T 3dsm_A 162 DKVVDELTIGIQ---PTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDT 238 (328)
T ss_dssp TEEEEEEECSSC---BCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCE
T ss_pred CeEEEEEEcCCC---ccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCE
Confidence 998888765443 4568999999977776654 78999999999887776532 235789999999998
Q ss_pred EEEeCCeEEEEcCCCCCCC
Q 024185 237 FVAASSVLSFWIPNPSSNS 255 (271)
Q Consensus 237 l~~~~~~v~iw~~~~~~~~ 255 (271)
|..+.+.|.+||..+++..
T Consensus 239 lyv~~~~v~~~d~~t~~~~ 257 (328)
T 3dsm_A 239 LYWINNDIWRMPVEADRVP 257 (328)
T ss_dssp EEEESSSEEEEETTCSSCC
T ss_pred EEEEccEEEEEECCCCcee
Confidence 8888779999999988764
No 186
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.70 E-value=4.3e-15 Score=129.74 Aligned_cols=202 Identities=7% Similarity=-0.052 Sum_probs=135.2
Q ss_pred cccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEecCCc--ceEEEcCCCCEEEEEecCCe-------
Q 024185 43 TSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILRLRGR--PTVAFDQQGLVFAVAMEAGA------- 113 (271)
Q Consensus 43 ~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~d~~------- 113 (271)
+|...+..+.|||||+.+++..--+|+.+..|++||+++++.+........ ..++|+|||+.|+.++.+..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~ 197 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDE 197 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGG
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCcccc
Confidence 344578889999999984321111566678999999999886511112222 56999999999999987765
Q ss_pred ------EEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEecCC----eEEEEECCCCeEEEEeecCCCCCce
Q 024185 114 ------IKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNN----NIYVLDAYGGEKRCGFSLEPSPNTN 183 (271)
Q Consensus 114 ------i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~----~i~~~d~~~~~~~~~~~~~~~~~~v 183 (271)
|++|++.+++...........+...+..+.|+|||++|++++.++ .|++||..+++. ..+..+... .
T Consensus 198 ~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~-~~l~~~~~~--~ 274 (695)
T 2bkl_A 198 RPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDF-RLLVKGVGA--K 274 (695)
T ss_dssp GGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSC-EEEEECSSC--C
T ss_pred CCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCce-EEeecCCCc--e
Confidence 999999887632122333444556788999999999998887665 778887665543 334434332 4
Q ss_pred eeEEECCCCCEEEEec---CCCcEEEEEcCCcee---EEEecCC-cceeEEEEEecCCcEEEEeC--CeEEEEcC
Q 024185 184 TEATFTPDGQYVVSGS---GDGTLHAWNINTRNE---VACWNGN-IGVVACLKWAPRRAMFVAAS--SVLSFWIP 249 (271)
Q Consensus 184 ~~~~~~~~~~~l~~~~---~dg~i~iwd~~~~~~---~~~~~~~-~~~v~~~~~s~~~~~l~~~~--~~v~iw~~ 249 (271)
....+ ++|.+++.+. .++.|.+||+.+++. ...+..+ ...+..++|+ ++.++++.. +..++|.+
T Consensus 275 ~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~ 347 (695)
T 2bkl_A 275 YEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVA 347 (695)
T ss_dssp EEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEE
T ss_pred EEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEE
Confidence 45556 6666444443 257899999987653 3333333 4568888998 667777765 66555544
No 187
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.70 E-value=2.5e-15 Score=120.16 Aligned_cols=183 Identities=9% Similarity=0.063 Sum_probs=124.5
Q ss_pred ceEEeeEEecCCchhhhhhhhhhcc-----CceEEEEEecCcceeEEEecCCcceEEEcCCCCEEEEEecC---------
Q 024185 46 GIRRGLFLSACLQLMIALCLVLLTT-----ALEYGIFVLMLASFQGILRLRGRPTVAFDQQGLVFAVAMEA--------- 111 (271)
Q Consensus 46 ~~v~~~~~s~~~~~~~~~~l~s~~~-----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d--------- 111 (271)
..+..+.|||+|+. ++..+. ...|.+||+.+++.......+.+..++|+|||+.|+.++.+
T Consensus 59 ~~~~~~~~SpDg~~-----la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~ 133 (347)
T 2gop_A 59 ENATMPRISPDGKK-----IAFMRANEEKKVSEIWVADLETLSSKKILEAKNIRSLEWNEDSRKLLIVGFKRREDEDFIF 133 (347)
T ss_dssp ESCEEEEECTTSSE-----EEEEEEETTTTEEEEEEEETTTTEEEEEEEESEEEEEEECTTSSEEEEEEECCCC------
T ss_pred ccCCCeEECCCCCE-----EEEEEeccCCCcceEEEEECCCCceEEEEcCCCccceeECCCCCEEEEEEccCCCcCCcEE
Confidence 45667899999998 333333 23477888888876665554446669999999999888642
Q ss_pred ------------------CeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEecCC---------eEEEEE
Q 024185 112 ------------------GAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNN---------NIYVLD 164 (271)
Q Consensus 112 ------------------~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~---------~i~~~d 164 (271)
..|++||+.+++. ...+.. . .+..+.|+||| .+++++.++ .|.++|
T Consensus 134 ~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~----~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d 206 (347)
T 2gop_A 134 EDDVPAWFDDLGFFDGEKTTFWIFDTESEEV----IEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE 206 (347)
T ss_dssp ---CCCC---------CEEEEEEEETTTTEE----EEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE
T ss_pred EcccceeecCcccccCccceEEEEECCCCeE----EeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeC
Confidence 5789999987652 122322 3 78899999999 777775542 455555
Q ss_pred CCCCeEEEEeecCCCCCceeeEEECCCCCEEEEecCC--------CcEEEEEcCCceeEEEecCCcceeEE-EEEecCCc
Q 024185 165 AYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGD--------GTLHAWNINTRNEVACWNGNIGVVAC-LKWAPRRA 235 (271)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------g~i~iwd~~~~~~~~~~~~~~~~v~~-~~~s~~~~ 235 (271)
+++.. .+..+ . .+..+ +|||++++.++.+ ..|.+|| +++.......+...+.. +.|+ |+
T Consensus 207 --~~~~~-~l~~~-~--~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg- 274 (347)
T 2gop_A 207 --DGKEE-KMFEK-V--SFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK- 274 (347)
T ss_dssp --TTEEE-EEEEE-E--SEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-
T ss_pred --CCceE-EeccC-c--ceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-
Confidence 55543 33333 2 24433 9999988877643 3688888 56655555666777886 9999 88
Q ss_pred EEEEeC--CeEEEEcCCCCC
Q 024185 236 MFVAAS--SVLSFWIPNPSS 253 (271)
Q Consensus 236 ~l~~~~--~~v~iw~~~~~~ 253 (271)
++++++ +.+++| +.+++
T Consensus 275 ~~~~~~~~~~~~l~-~~~g~ 293 (347)
T 2gop_A 275 VYFTLFEEGSVNLY-IWDGE 293 (347)
T ss_dssp EEEEEEETTEEEEE-EESSS
T ss_pred EEEEEecCCcEEEE-EcCCc
Confidence 777766 789999 87443
No 188
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.70 E-value=1.9e-15 Score=121.40 Aligned_cols=172 Identities=13% Similarity=0.064 Sum_probs=133.0
Q ss_pred ceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcc-----------eeEEEecCCcceEEEcCCCCEEEEEecCCeE
Q 024185 46 GIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLAS-----------FQGILRLRGRPTVAFDQQGLVFAVAMEAGAI 114 (271)
Q Consensus 46 ~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~-----------~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i 114 (271)
..++.+++++.... +++|+.++ +++|+++..+ .........+..++| |+++|+++ .++.|
T Consensus 38 ~~~nlLais~~~gl-----l~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~V~~l~f--d~~~L~v~-~~~~l 108 (388)
T 1xip_A 38 ASLQNLDISNSKSL-----FVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEIPDVIFVCF--HGDQVLVS-TRNAL 108 (388)
T ss_dssp SCCBCEEEETTTTE-----EEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEECTTEEEEEE--ETTEEEEE-ESSEE
T ss_pred ccccEEEEcCCCCE-----EEEeCCCE-EEEEEhhHhhhhhccccccccceEEeeCCCeeEEEE--CCCEEEEE-cCCcE
Confidence 36888999999998 77788775 5569876433 122333334777999 99999999 78999
Q ss_pred EEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEecCCeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCE
Q 024185 115 KLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQY 194 (271)
Q Consensus 115 ~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 194 (271)
++||+.+... ......|...+.++.+.+.. +++++.||.+.+||+.+++... + .. .|++++|||+|
T Consensus 109 ~v~dv~sl~~----~~~~~~~~~~v~~i~~~~p~--~av~~~dG~L~v~dl~~~~~~~-~---~~--~Vs~v~WSpkG-- 174 (388)
T 1xip_A 109 YSLDLEELSE----FRTVTSFEKPVFQLKNVNNT--LVILNSVNDLSALDLRTKSTKQ-L---AQ--NVTSFDVTNSQ-- 174 (388)
T ss_dssp EEEESSSTTC----EEEEEECSSCEEEEEECSSE--EEEEETTSEEEEEETTTCCEEE-E---EE--SEEEEEECSSE--
T ss_pred EEEEchhhhc----cCccceeecceeeEEecCCC--EEEEECCCCEEEEEccCCcccc-c---cC--CceEEEEcCCc--
Confidence 9999987664 33444566778888887653 8889999999999999887643 2 12 39999999999
Q ss_pred EEEecCCCcEEEEEcCCcee--EEEe------c---CCcceeEEEEEecCCcEEEEe
Q 024185 195 VVSGSGDGTLHAWNINTRNE--VACW------N---GNIGVVACLKWAPRRAMFVAA 240 (271)
Q Consensus 195 l~~~~~dg~i~iwd~~~~~~--~~~~------~---~~~~~v~~~~~s~~~~~l~~~ 240 (271)
++.|..||.+++|+...++. ..++ . +|...|.++.|.+++.++++=
T Consensus 175 ~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 175 LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEE
Confidence 67889999999999887775 5556 2 367889999999999988864
No 189
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.68 E-value=1.2e-13 Score=109.90 Aligned_cols=200 Identities=11% Similarity=0.044 Sum_probs=138.8
Q ss_pred cccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEec--CCcceEEEcCCCCEEEEEecC----CeE
Q 024185 41 FATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILRL--RGRPTVAFDQQGLVFAVAMEA----GAI 114 (271)
Q Consensus 41 ~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~d----~~i 114 (271)
+..+.....+++|+|+++. ++++..++.|.+||.++++....... ..+..++++|+++++++...+ +.|
T Consensus 40 ~~~~~~~~~~~~~~~~g~l-----~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i 114 (333)
T 2dg1_A 40 ISKKGLQLEGLNFDRQGQL-----FLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGI 114 (333)
T ss_dssp EESSCCCEEEEEECTTSCE-----EEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEE
T ss_pred EeccCccccCcEECCCCCE-----EEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceE
Confidence 4455556688999999986 56777889999999988876554432 345669999999977777665 689
Q ss_pred EEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEec------CCeEEEEECCCCeEEEEeecCCCCCceeeEEE
Q 024185 115 KLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTT------NNNIYVLDAYGGEKRCGFSLEPSPNTNTEATF 188 (271)
Q Consensus 115 ~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~------d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~ 188 (271)
.+||..+++. ........+...+.+++++|+|+.+++... .+.|..+|..+++...... ... .+..++|
T Consensus 115 ~~~d~~~~~~--~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~--~~~~i~~ 189 (333)
T 2dg1_A 115 FAATENGDNL--QDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQ-NIS--VANGIAL 189 (333)
T ss_dssp EEECTTSCSC--EEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEE-EES--SEEEEEE
T ss_pred EEEeCCCCEE--EEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeec-CCC--cccceEE
Confidence 9999987764 111111123457899999999987776553 3567777766555433222 211 2678999
Q ss_pred CCCCCEEE-EecCCCcEEEEEcCC-ceeEE--------EecCCcceeEEEEEecCCcEEEEeC--CeEEEEcCCC
Q 024185 189 TPDGQYVV-SGSGDGTLHAWNINT-RNEVA--------CWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNP 251 (271)
Q Consensus 189 ~~~~~~l~-~~~~dg~i~iwd~~~-~~~~~--------~~~~~~~~v~~~~~s~~~~~l~~~~--~~v~iw~~~~ 251 (271)
+|++++++ +.+.++.|.+||+.+ ++.+. .+.++ ..+..++++++|+++++.. +.|.+||.+.
T Consensus 190 ~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~g 263 (333)
T 2dg1_A 190 STDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNKRG 263 (333)
T ss_dssp CTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECTTS
T ss_pred CCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECCCC
Confidence 99998665 445578999999964 33322 12222 3578899999999877763 7899999853
No 190
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.68 E-value=1.2e-14 Score=115.65 Aligned_cols=193 Identities=15% Similarity=0.106 Sum_probs=136.0
Q ss_pred ceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEecC--CcceEEEcCCCCEEEEEecCCeEEEEeCCCCC
Q 024185 46 GIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILRLR--GRPTVAFDQQGLVFAVAMEAGAIKLFDSRSYD 123 (271)
Q Consensus 46 ~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~ 123 (271)
..+.++.|++++.. ++..+.++.++.| .++....+..+ ....++|++++++++++..++.|.+||..+++
T Consensus 6 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~ 77 (333)
T 2dg1_A 6 QDLPTLFYSGKSNS-----AVPIISESELQTI---TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKE 77 (333)
T ss_dssp CCCCBCCSCGGGGC-----SSCCCCGGGSCEE---ECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCC
T ss_pred cccceeeecCCccc-----eeEEeecccCccc---ccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCc
Confidence 34667888988877 5566788899999 34445555444 34569999999977788888999999998776
Q ss_pred CCcceEEEecCCccceEEEEEcCCCcEEEEEecC----CeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEec
Q 024185 124 KGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTN----NNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGS 199 (271)
Q Consensus 124 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d----~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 199 (271)
. ......+...+.+++++|+|+++++...+ +.|.+||..+++....+........+..+.++|+|+++++..
T Consensus 78 ~----~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~ 153 (333)
T 2dg1_A 78 I----KRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDF 153 (333)
T ss_dssp E----EEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEEC
T ss_pred E----EEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEec
Confidence 3 22222455789999999999877776666 689999988776543333222223588899999999887765
Q ss_pred C------CCcEEEEEcCCceeEEEecCCcceeEEEEEecCCcEEEEe-C--CeEEEEcCCC
Q 024185 200 G------DGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAA-S--SVLSFWIPNP 251 (271)
Q Consensus 200 ~------dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~--~~v~iw~~~~ 251 (271)
. .+.|..+|..+++... +..+...+..++|+|+|+.|+.+ + +.|.+||+++
T Consensus 154 ~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~ 213 (333)
T 2dg1_A 154 RGYSTNPLGGVYYVSPDFRTVTP-IIQNISVANGIALSTDEKVLWVTETTANRLHRIALED 213 (333)
T ss_dssp CCBTTBCCEEEEEECTTSCCEEE-EEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred cccccCCCceEEEEeCCCCEEEE-eecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecC
Confidence 4 3567777765544433 22233457889999999855444 3 7899999864
No 191
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.66 E-value=2.8e-14 Score=114.09 Aligned_cols=179 Identities=8% Similarity=0.013 Sum_probs=117.5
Q ss_pred EEeeEEecCCchhhhhhhhhhcc---------------------------CceEEEEEecCcceeEEEecCCcceEEEcC
Q 024185 48 RRGLFLSACLQLMIALCLVLLTT---------------------------ALEYGIFVLMLASFQGILRLRGRPTVAFDQ 100 (271)
Q Consensus 48 v~~~~~s~~~~~~~~~~l~s~~~---------------------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 100 (271)
+..+.|+|+++.+ +.++. ...|++||+.+++.+..+....+..++|+|
T Consensus 106 ~~~~~wspdg~~l-----~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~sp 180 (347)
T 2gop_A 106 IRSLEWNEDSRKL-----LIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEKPRFSSGIWHR 180 (347)
T ss_dssp EEEEEECTTSSEE-----EEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEEETTCEEEEET
T ss_pred ccceeECCCCCEE-----EEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecCCCcccccCCC
Confidence 8889999999983 33332 367999999888763444322556699999
Q ss_pred CCCEEEEEecCC-------eEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEecC--------CeEEEEEC
Q 024185 101 QGLVFAVAMEAG-------AIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTN--------NNIYVLDA 165 (271)
Q Consensus 101 ~~~~l~~~~~d~-------~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d--------~~i~~~d~ 165 (271)
|| +++++..++ ...+|.+.+++ ...+..+ ..+..+ +|||++|+.++.+ ..|.+||
T Consensus 181 dg-~~~~~~~~~~~~~~~~~~~l~~~d~~~-----~~~l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d- 250 (347)
T 2gop_A 181 DK-IVVNVPHREIIPQYFKFWDIYIWEDGK-----EEKMFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD- 250 (347)
T ss_dssp TE-EEEEEECCCSSCCSSCCEEEEEEETTE-----EEEEEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC-
T ss_pred Ce-EEEEEecccccccccccccEEEeCCCc-----eEEeccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC-
Confidence 99 777775432 33444333333 2222223 445444 9999999887754 4788888
Q ss_pred CCCeEEEEeecCCCCCceee-EEECCCCCEEEEecCCCcEEEEEcCCceeEEEecCCcceeEEEEEecCCcEEEEeC--C
Q 024185 166 YGGEKRCGFSLEPSPNTNTE-ATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--S 242 (271)
Q Consensus 166 ~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~ 242 (271)
+++.......+. ..+.. +.|+ |+ ++++++.++.+++| +.+++..... .+...|.+++|+| .++++++ +
T Consensus 251 -~~~~~~l~~~~~--~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~~~~~-~~~~~v~~~~~s~--~~~~~~~~~~ 321 (347)
T 2gop_A 251 -GKEVMGILDEVD--RGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEIKPIA-KGRHWIMGFDVDE--IVVYLKETAT 321 (347)
T ss_dssp -SSCEEESSTTCC--SEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSEEEEE-CSSSEEEEEEESS--SEEEEEECSS
T ss_pred -CCceEeccccCC--cccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCceEEEe-cCCCeEEeeeeeC--cEEEEEcCCC
Confidence 555433333322 34765 8999 88 88899999999999 8766654444 4577899999999 5555554 3
Q ss_pred e-EEEEcCC
Q 024185 243 V-LSFWIPN 250 (271)
Q Consensus 243 ~-v~iw~~~ 250 (271)
. ..+|.++
T Consensus 322 ~~~~l~~~~ 330 (347)
T 2gop_A 322 RLRELFTWD 330 (347)
T ss_dssp SCCEEEEES
T ss_pred ChHHheEeC
Confidence 3 2566655
No 192
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.65 E-value=4.6e-13 Score=113.48 Aligned_cols=219 Identities=11% Similarity=0.082 Sum_probs=152.3
Q ss_pred ecceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEec--CcceeEEEecCCc-c
Q 024185 18 RQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLM--LASFQGILRLRGR-P 94 (271)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~--~~~~~~~~~~~~~-~ 94 (271)
..++.+..++..++ ..+..+... .....+.++|+|++ +.+++.|+.|.+||+. +++.+..+..... .
T Consensus 174 ~~~~~V~viD~~t~----~v~~~i~~g-~~p~~v~~SpDGr~-----lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~P~ 243 (567)
T 1qks_A 174 RDAGQIALIDGSTY----EIKTVLDTG-YAVHISRLSASGRY-----LFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEAR 243 (567)
T ss_dssp TTTTEEEEEETTTC----CEEEEEECS-SCEEEEEECTTSCE-----EEEEETTSEEEEEETTSSSCCEEEEEECCSEEE
T ss_pred CCCCeEEEEECCCC----eEEEEEeCC-CCccceEECCCCCE-----EEEEcCCCeEEEEECCCCCCcEeEEEecCCCCc
Confidence 34678888887766 222333332 24557999999998 5567789999999995 7888888876543 4
Q ss_pred eEEEc----CCCCEEEEEec-CCeEEEEeCCCCCCCcceEEEecC--------C-ccceEEEEEcCCCcEEEEE-ecCCe
Q 024185 95 TVAFD----QQGLVFAVAME-AGAIKLFDSRSYDKGPFDTFLVGG--------D-TAEVCDIKFSNDGKSMLLT-TTNNN 159 (271)
Q Consensus 95 ~~~~~----~~~~~l~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~--------~-~~~v~~~~~s~~~~~l~~~-~~d~~ 159 (271)
.++|+ |||++++++.. ++++.++|..+.+. +......+ | ...+..+..++++..++.. ..+|.
T Consensus 244 ~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~--~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~ 321 (567)
T 1qks_A 244 SIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEP--KKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGK 321 (567)
T ss_dssp EEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCE--EEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTE
T ss_pred eeEEccccCCCCCEEEEEEccCCeEEEEECCCCcE--EEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCe
Confidence 49999 69998888754 58999999888664 33333221 1 1267889999986655544 45799
Q ss_pred EEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEec-CCCcEEEEEcCCceeEEEecC-----CcceeEEEE-Eec
Q 024185 160 IYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGS-GDGTLHAWNINTRNEVACWNG-----NIGVVACLK-WAP 232 (271)
Q Consensus 160 i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~-----~~~~v~~~~-~s~ 232 (271)
|.++|..+.+.+........ .....+.|+|+|+++++++ .++.|.++|+.+++.+..+.. |.+ .... ++|
T Consensus 322 v~~vd~~~~~~~~v~~i~~~-~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg--~g~~~~~p 398 (567)
T 1qks_A 322 ILLVDYTDLNNLKTTEISAE-RFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPG--RGANFVHP 398 (567)
T ss_dssp EEEEETTCSSEEEEEEEECC-SSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCT--TCEEEEET
T ss_pred EEEEecCCCccceeeeeecc-ccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCc--cceeeECC
Confidence 99999887654333222211 2366789999999887665 478999999999998776654 322 1223 588
Q ss_pred C-CcEEEEeC---CeEEEEcCCC
Q 024185 233 R-RAMFVAAS---SVLSFWIPNP 251 (271)
Q Consensus 233 ~-~~~l~~~~---~~v~iw~~~~ 251 (271)
+ +..++++. ++|.++|..+
T Consensus 399 ~~g~v~~t~~~g~~~Vsvid~~~ 421 (567)
T 1qks_A 399 TFGPVWATSHMGDDSVALIGTDP 421 (567)
T ss_dssp TTEEEEEEEBSSSSEEEEEECCT
T ss_pred CCCcEEEeCCCCCCeEEEecCCC
Confidence 7 45555552 7899999987
No 193
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.64 E-value=2.5e-13 Score=106.92 Aligned_cols=221 Identities=13% Similarity=0.121 Sum_probs=143.8
Q ss_pred ecceeeEEEEeeccceeeEEEEEcccccceEEeeEEecC-CchhhhhhhhhhccCceEEEEEecCcceeEE-Eec-----
Q 024185 18 RQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSAC-LQLMIALCLVLLTTALEYGIFVLMLASFQGI-LRL----- 90 (271)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~-~~~----- 90 (271)
..++.+..++...+...........++...+..++++++ ++. +++ +..+.|.+||.+ ++.... ...
T Consensus 43 ~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l-----~v~-~~~~~l~~~d~~-g~~~~~~~~~~~~~~ 115 (314)
T 1pjx_A 43 KPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQL-----FVA-DMRLGLLVVQTD-GTFEEIAKKDSEGRR 115 (314)
T ss_dssp EECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEE-----EEE-ETTTEEEEEETT-SCEEECCSBCTTSCB
T ss_pred CCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcE-----EEE-ECCCCEEEEeCC-CCEEEEEeccCCCcc
Confidence 456677777654442211100000124456788999999 775 223 334478899987 665433 221
Q ss_pred -CCcceEEEcCCCCEEEEEecC---------------CeEEEEeCCCCCCCcceEEEecCCccceEEEEEc----CCCcE
Q 024185 91 -RGRPTVAFDQQGLVFAVAMEA---------------GAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFS----NDGKS 150 (271)
Q Consensus 91 -~~~~~~~~~~~~~~l~~~~~d---------------~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s----~~~~~ 150 (271)
..+..++++++|+++++...+ +.|..||.. ++. ..+..+......++|+ |+++.
T Consensus 116 ~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~-----~~~~~~~~~~~~i~~~~~~d~dg~~ 189 (314)
T 1pjx_A 116 MQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQM-----IQVDTAFQFPNGIAVRHMNDGRPYQ 189 (314)
T ss_dssp CBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCE-----EEEEEEESSEEEEEEEECTTSCEEE
T ss_pred ccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCE-----EEeccCCCCcceEEEecccCCCCCE
Confidence 124569999999877766554 567777765 332 1112233456889999 99977
Q ss_pred EEEE-ecCCeEEEEECC-CCeEE--EEeec-CCCC-CceeeEEECCCCCEEEEecCCCcEEEEEcCCceeEEEecCCcce
Q 024185 151 MLLT-TTNNNIYVLDAY-GGEKR--CGFSL-EPSP-NTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGV 224 (271)
Q Consensus 151 l~~~-~~d~~i~~~d~~-~~~~~--~~~~~-~~~~-~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~ 224 (271)
++.+ ..++.|.+||.. +++.. ..+.. .... .....++++++|+++++...++.|.+||..+++.+..+..+...
T Consensus 190 l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~ 269 (314)
T 1pjx_A 190 LIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEK 269 (314)
T ss_dssp EEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSC
T ss_pred EEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCC
Confidence 6655 457899999976 45421 11111 1111 33678999999998888777889999999878877777666677
Q ss_pred eEEEEEecCCcEEEEe-C--CeEEEEcCCC
Q 024185 225 VACLKWAPRRAMFVAA-S--SVLSFWIPNP 251 (271)
Q Consensus 225 v~~~~~s~~~~~l~~~-~--~~v~iw~~~~ 251 (271)
+.+++|+|+++.|..+ . +.|..|++..
T Consensus 270 ~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 270 PSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred ceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 8999999999955444 4 5899999865
No 194
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.63 E-value=1.2e-13 Score=106.41 Aligned_cols=196 Identities=11% Similarity=0.041 Sum_probs=134.5
Q ss_pred eEEeeEEecCCchhhhhhhh-hhccCceEEEEEecCcceeEEEec--CCcceEEEcCCCCEEEEEecCCeEEEEeCCCCC
Q 024185 47 IRRGLFLSACLQLMIALCLV-LLTTALEYGIFVLMLASFQGILRL--RGRPTVAFDQQGLVFAVAMEAGAIKLFDSRSYD 123 (271)
Q Consensus 47 ~v~~~~~s~~~~~~~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~ 123 (271)
....++++++++. ++ +...++.|..||..++........ .....++++++++.+++.. ++.|.+||.....
T Consensus 25 ~p~~i~~~~~g~l-----~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~ 98 (270)
T 1rwi_B 25 SPSGVAVDSAGNV-----YVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNN 98 (270)
T ss_dssp CEEEEEECTTCCE-----EEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSC
T ss_pred CccceEECCCCCE-----EEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCce
Confidence 5567889999986 55 546788999998765543222111 2345699999998555555 8899999987655
Q ss_pred CCcceEEEecCCccceEEEEEcCCCcEEEEEecCCeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEecCCCc
Q 024185 124 KGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGT 203 (271)
Q Consensus 124 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 203 (271)
. ..........+..++++|+|+.+++...++.|.+|+..+........ .....+..++++|+|+++++...++.
T Consensus 99 ~----~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~--~~~~~p~~i~~~~~g~l~v~~~~~~~ 172 (270)
T 1rwi_B 99 Q----TVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPF--TGLNDPDGVAVDNSGNVYVTDTDNNR 172 (270)
T ss_dssp C----EECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCC--CSCCSCCCEEECTTCCEEEEEGGGTE
T ss_pred E----eeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeecc--ccCCCceeEEEeCCCCEEEEECCCCE
Confidence 3 21111223568899999999877776778899999865544332211 11123677999999997777777889
Q ss_pred EEEEEcCCceeEEEecCCcceeEEEEEecCCcEEEEeC--CeEEEEcCCCCCC
Q 024185 204 LHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNPSSN 254 (271)
Q Consensus 204 i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~~v~iw~~~~~~~ 254 (271)
|.+||............+...+.+++++++|+++++.. +.|.+|+..+...
T Consensus 173 i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~ 225 (270)
T 1rwi_B 173 VVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTS 225 (270)
T ss_dssp EEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCC
T ss_pred EEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcc
Confidence 99999877665443333335678999999998777764 6799999877544
No 195
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.63 E-value=1.5e-13 Score=116.54 Aligned_cols=187 Identities=11% Similarity=-0.010 Sum_probs=141.4
Q ss_pred hhhhccCceEEEEEecCcceeEEEecC-CcceEEEcCCCCEEEEEecCCeEEEEeCC--CCCCCcceEEEecCCccceEE
Q 024185 65 LVLLTTALEYGIFVLMLASFQGILRLR-GRPTVAFDQQGLVFAVAMEAGAIKLFDSR--SYDKGPFDTFLVGGDTAEVCD 141 (271)
Q Consensus 65 l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~d~~i~i~d~~--~~~~~~~~~~~~~~~~~~v~~ 141 (271)
+++...++.|.++|..+++.+..+... ....+.++|||+++++++.++.|.+||+. +.+. ...+... .....
T Consensus 170 ~V~~~~~~~V~viD~~t~~v~~~i~~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~----v~~i~~G-~~P~~ 244 (567)
T 1qks_A 170 SVTLRDAGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTT----VAEIKIG-SEARS 244 (567)
T ss_dssp EEEETTTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCE----EEEEECC-SEEEE
T ss_pred EEEeCCCCeEEEEECCCCeEEEEEeCCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcE----eEEEecC-CCCce
Confidence 567788999999999999999888765 34569999999999999999999999996 5443 3333322 34678
Q ss_pred EEEc----CCCcEEEEEec-CCeEEEEECCCCeEEEEeecCCC---------CCceeeEEECCCCCE-EEEecCCCcEEE
Q 024185 142 IKFS----NDGKSMLLTTT-NNNIYVLDAYGGEKRCGFSLEPS---------PNTNTEATFTPDGQY-VVSGSGDGTLHA 206 (271)
Q Consensus 142 ~~~s----~~~~~l~~~~~-d~~i~~~d~~~~~~~~~~~~~~~---------~~~v~~~~~~~~~~~-l~~~~~dg~i~i 206 (271)
++|+ |||+++++++. ++++.++|..+.+.+..+..... ...+..+..++++.. ++....+|.|.+
T Consensus 245 ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~ 324 (567)
T 1qks_A 245 IETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILL 324 (567)
T ss_dssp EEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEE
T ss_pred eEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEE
Confidence 9999 69999988776 69999999999998887653210 113667888888654 455566799999
Q ss_pred EEcCCceeE--EEecCCcceeEEEEEecCCcEEEEeC---CeEEEEcCCCCCCCcC
Q 024185 207 WNINTRNEV--ACWNGNIGVVACLKWAPRRAMFVAAS---SVLSFWIPNPSSNSTD 257 (271)
Q Consensus 207 wd~~~~~~~--~~~~~~~~~v~~~~~s~~~~~l~~~~---~~v~iw~~~~~~~~~~ 257 (271)
+|..+.+.+ ..+. .......+.|+|+|+++++++ +.|.++|+.++++...
T Consensus 325 vd~~~~~~~~v~~i~-~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~ 379 (567)
T 1qks_A 325 VDYTDLNNLKTTEIS-AERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAI 379 (567)
T ss_dssp EETTCSSEEEEEEEE-CCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEE
T ss_pred EecCCCccceeeeee-ccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEE
Confidence 998875432 2332 223456889999999887765 8899999999876543
No 196
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.63 E-value=1.1e-12 Score=105.82 Aligned_cols=222 Identities=9% Similarity=-0.056 Sum_probs=138.5
Q ss_pred eeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhh---------ccCceEEEEEecCcceeEEEecC-
Q 024185 22 ILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLL---------TTALEYGIFVLMLASFQGILRLR- 91 (271)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~---------~~dg~i~iwd~~~~~~~~~~~~~- 91 (271)
.+..++...+ ..+..+...... .+.++|+++.+++ +. ..++.|.+||..+.+.+..+...
T Consensus 48 ~v~v~D~~t~----~~~~~i~~g~~p--~i~~spDg~~lyv----~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~ 117 (373)
T 2mad_H 48 QQWVLDAGSG----SILGHVNGGFLP--NPVAAHSGSEFAL----ASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPD 117 (373)
T ss_pred EEEEEECCCC----eEEEEecCCCCC--CeEECCCCCEEEE----EeccccccccCCCCCeEEEEECCCCcEEEEEECCC
Confidence 5667776655 223334433333 7999999998533 22 24678999999998888777543
Q ss_pred --------CcceEEEcCCCCEEEEEec--CCeEEEEeCCCCCCCcceE-EEecCC-----cc------------------
Q 024185 92 --------GRPTVAFDQQGLVFAVAME--AGAIKLFDSRSYDKGPFDT-FLVGGD-----TA------------------ 137 (271)
Q Consensus 92 --------~~~~~~~~~~~~~l~~~~~--d~~i~i~d~~~~~~~~~~~-~~~~~~-----~~------------------ 137 (271)
....++|+|||++|+++.. ++.|.++| .+++. ... ....+. .+
T Consensus 118 ~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~dg~~~~vd~ 194 (373)
T 2mad_H 118 APRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSS--DDQLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDH 194 (373)
T ss_pred ccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCE--EeEEcCCCceEEEEeCCCceEEEEcCCCCEEEEEC
Confidence 2234899999999999874 47899999 88764 222 111110 00
Q ss_pred --ce-----------------EEEEEcCCCcEEEEEecCCeEEEEECCCCe--EEEEeecCC--------CCCceeeEEE
Q 024185 138 --EV-----------------CDIKFSNDGKSMLLTTTNNNIYVLDAYGGE--KRCGFSLEP--------SPNTNTEATF 188 (271)
Q Consensus 138 --~v-----------------~~~~~s~~~~~l~~~~~d~~i~~~d~~~~~--~~~~~~~~~--------~~~~v~~~~~ 188 (271)
.+ ....+.+++..++..+..+.+.+.|+.++. .+..+.... .+.....+.+
T Consensus 195 ~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~ 274 (373)
T 2mad_H 195 AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAY 274 (373)
T ss_pred CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEE
Confidence 00 001122222222222334455555654332 112221110 0112333788
Q ss_pred CCCCCEEEEecC----------CCcEEEEEcCCceeEEEecCCcceeEEEEEecCCc-EEEEeC---CeEEEEcCCCCCC
Q 024185 189 TPDGQYVVSGSG----------DGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRA-MFVAAS---SVLSFWIPNPSSN 254 (271)
Q Consensus 189 ~~~~~~l~~~~~----------dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~---~~v~iw~~~~~~~ 254 (271)
+||++.++.+.. ++.|.++|+.+++.+.++... ....+++|+|||+ +++++. ++|.+||+.+++.
T Consensus 275 s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g-~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~v 353 (373)
T 2mad_H 275 LKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLG-HDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQ 353 (373)
T ss_pred CCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECC-CCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCE
Confidence 999998877643 357999999999999988643 3578999999999 677664 7899999999988
Q ss_pred CcC
Q 024185 255 STD 257 (271)
Q Consensus 255 ~~~ 257 (271)
...
T Consensus 354 v~~ 356 (373)
T 2mad_H 354 DQS 356 (373)
T ss_pred Eee
Confidence 766
No 197
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.63 E-value=2.8e-14 Score=124.60 Aligned_cols=227 Identities=10% Similarity=-0.020 Sum_probs=146.0
Q ss_pred ecceeEEeeec-c----eeeEEEEeeccceeeEEEEEcccccceE--EeeEEecCCchhhhhhhhhhccCce--------
Q 024185 9 PITQALLFARQ-N----IILILLESLCGIYQCMIIEFFATSKGIR--RGLFLSACLQLMIALCLVLLTTALE-------- 73 (271)
Q Consensus 9 ~~~~~l~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~~s~~~~~~~~~~l~s~~~dg~-------- 73 (271)
|..+.+++... + ..+..++...+.... ..+...+ ..++|+|+|+. |+.++.|..
T Consensus 130 PDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~------~~~~~~~~~~~~~wspDg~~-----l~~~~~d~~~~~~~~~~ 198 (695)
T 2bkl_A 130 WDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK------VDVIEGGKYATPKWTPDSKG-----FYYEWLPTDPSIKVDER 198 (695)
T ss_dssp TTSSEEEEEEEETTCSCCEEEEEETTTCCBCS------SCCBSCCTTCCCEECTTSSE-----EEEEECCCCTTSCGGGG
T ss_pred CCCCEEEEEECCCCCceEEEEEEECCCCCCcC------CcccCcccccceEEecCCCE-----EEEEEecCCCCCccccC
Confidence 55566666643 1 356667665552210 1111122 57899999998 556666554
Q ss_pred -----EEEEEecCcce--eEEEec--C--CcceEEEcCCCCEEEEEecCC----eEEEEeCCCCCCCcceEEEecCCccc
Q 024185 74 -----YGIFVLMLASF--QGILRL--R--GRPTVAFDQQGLVFAVAMEAG----AIKLFDSRSYDKGPFDTFLVGGDTAE 138 (271)
Q Consensus 74 -----i~iwd~~~~~~--~~~~~~--~--~~~~~~~~~~~~~l~~~~~d~----~i~i~d~~~~~~~~~~~~~~~~~~~~ 138 (271)
|++|++.+++. ...+.. + ....+.|+|||++|++++.++ .|++++..+++. ..+..+...
T Consensus 199 ~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~-----~~l~~~~~~ 273 (695)
T 2bkl_A 199 PGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDF-----RLLVKGVGA 273 (695)
T ss_dssp GGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSC-----EEEEECSSC
T ss_pred CCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCce-----EEeecCCCc
Confidence 99999988763 233332 2 234589999999988877665 677776655442 222334455
Q ss_pred eEEEEEcCCCcEEEEEec----CCeEEEEECCCCeE--EEEeecCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcC-C
Q 024185 139 VCDIKFSNDGKSMLLTTT----NNNIYVLDAYGGEK--RCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNIN-T 211 (271)
Q Consensus 139 v~~~~~s~~~~~l~~~~~----d~~i~~~d~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~-~ 211 (271)
+....+ ++|. ++..+. ++.|.+||+.+++. ...+..+.....+..++|+ ++.++++...|+..++|.+. +
T Consensus 274 ~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~ 350 (695)
T 2bkl_A 274 KYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLK 350 (695)
T ss_dssp CEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETT
T ss_pred eEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCC
Confidence 566666 6666 554443 58899999987653 2333333322347778887 67788888889888877654 4
Q ss_pred ceeEEEecCC-cceeEEEEEecCCcEEEEe--C----CeEEEEcCCCCCC
Q 024185 212 RNEVACWNGN-IGVVACLKWAPRRAMFVAA--S----SVLSFWIPNPSSN 254 (271)
Q Consensus 212 ~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~--~----~~v~iw~~~~~~~ 254 (271)
++....+..+ .+.+..++++|++..++.. + +++++||+.+++.
T Consensus 351 g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~ 400 (695)
T 2bkl_A 351 GKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKS 400 (695)
T ss_dssp CCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred CCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 6666666554 6678889999998766532 2 6799999988764
No 198
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.62 E-value=5.2e-12 Score=98.51 Aligned_cols=224 Identities=9% Similarity=0.011 Sum_probs=147.9
Q ss_pred eeEEeeec-ceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEE-e
Q 024185 12 QALLFARQ-NIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGIL-R 89 (271)
Q Consensus 12 ~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-~ 89 (271)
..+.++.. ++.+..++.. +.. ... ........+..+++.+++.. +++...++.|..||. +++..... .
T Consensus 68 g~l~v~~~~~~~i~~~~~~-g~~--~~~-~~~~~~~~~~~i~~~~~g~l-----~v~~~~~~~i~~~d~-~g~~~~~~~~ 137 (299)
T 2z2n_A 68 GEVWFTENAANKIGRITKK-GII--KEY-TLPNPDSAPYGITEGPNGDI-----WFTEMNGNRIGRITD-DGKIREYELP 137 (299)
T ss_dssp SCEEEEETTTTEEEEECTT-SCE--EEE-ECSSTTCCEEEEEECTTSCE-----EEEETTTTEEEEECT-TCCEEEEECS
T ss_pred CCEEEeCCCCCeEEEECCC-CcE--EEE-eCCCcCCCceeeEECCCCCE-----EEEecCCceEEEECC-CCCEEEecCC
Confidence 34555543 4566666543 211 111 12223456778999998876 455556788999998 55543222 2
Q ss_pred --cCCcceEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEecCCeEEEEECCC
Q 024185 90 --LRGRPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYG 167 (271)
Q Consensus 90 --~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~~ 167 (271)
......++++++++.+++...++.|..||. +++. .......+...+..++++++|+..++...++.|..||. +
T Consensus 138 ~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~---~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~ 212 (299)
T 2z2n_A 138 NKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDI---TEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-S 212 (299)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCE---EEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-T
T ss_pred CCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcE---EEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-C
Confidence 123556999999987776666789999998 5542 22333344566889999999987666666889999998 6
Q ss_pred CeEEEEeecCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCCceeEE-EecCCcceeEEEEEecCCcEEEEeC-CeEE
Q 024185 168 GEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVA-CWNGNIGVVACLKWAPRRAMFVAAS-SVLS 245 (271)
Q Consensus 168 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~-~~~~~~~~v~~~~~s~~~~~l~~~~-~~v~ 245 (271)
++... +........+.+++++++|+..++...++.|..||. +++... .+..+...+.++++ ++|+++++.+ +.+.
T Consensus 213 g~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~-~~g~l~v~~~~~~l~ 289 (299)
T 2z2n_A 213 GEITE-FKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTS-NNIIEEYPIQIKSAEPHGICF-DGETIWFAMECDKIG 289 (299)
T ss_dssp CCEEE-EECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEET-TTEEEEEECSSSSCCEEEEEE-CSSCEEEEETTTEEE
T ss_pred CcEEE-EECCCCCCCceeEEECCCCCEEEeccCCceEEEECC-CCceEEEeCCCCCCccceEEe-cCCCEEEEecCCcEE
Confidence 66433 322222244888999999997777667789999998 454322 23444567899999 9999888765 7888
Q ss_pred EEcCCCCC
Q 024185 246 FWIPNPSS 253 (271)
Q Consensus 246 iw~~~~~~ 253 (271)
.++.++++
T Consensus 290 ~~~~~~~~ 297 (299)
T 2z2n_A 290 KLTLIKDN 297 (299)
T ss_dssp EEEEC---
T ss_pred EEEcCccc
Confidence 88887654
No 199
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.61 E-value=2.4e-13 Score=108.88 Aligned_cols=237 Identities=9% Similarity=0.002 Sum_probs=151.6
Q ss_pred ecceeEEeeec-----ceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhh---------ccCceE
Q 024185 9 PITQALLFARQ-----NIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLL---------TTALEY 74 (271)
Q Consensus 9 ~~~~~l~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~---------~~dg~i 74 (271)
|....+++... ++.+..++..+. ..+..+...... . ++++|+|+.+++ +. ..++.|
T Consensus 42 pd~~~vyV~~~~~~~~~~~V~ViD~~t~----~v~~~I~vG~~P-~-va~spDG~~lyV----an~~~~r~~~G~~~~~V 111 (386)
T 3sjl_D 42 PDARRVYVNDPAHFAAVTQQFVIDGEAG----RVIGMIDGGFLP-N-PVVADDGSFIAH----ASTVFSRIARGERTDYV 111 (386)
T ss_dssp CCTTEEEEEECGGGCSSEEEEEEETTTT----EEEEEEEECSSC-E-EEECTTSSCEEE----EEEEEEETTEEEEEEEE
T ss_pred CCCCEEEEEcCcccCCCCEEEEEECCCC----eEEEEEECCCCC-c-EEECCCCCEEEE----EcccccccccCCCCCEE
Confidence 33445555533 467888887666 333334433344 3 999999998433 22 246789
Q ss_pred EEEEecCcceeEEEecC---------CcceEEEcCCCCEEEEEec--CCeEEEEeCCCCCCCcceEEEecCC--------
Q 024185 75 GIFVLMLASFQGILRLR---------GRPTVAFDQQGLVFAVAME--AGAIKLFDSRSYDKGPFDTFLVGGD-------- 135 (271)
Q Consensus 75 ~iwd~~~~~~~~~~~~~---------~~~~~~~~~~~~~l~~~~~--d~~i~i~d~~~~~~~~~~~~~~~~~-------- 135 (271)
.+||..+.+.+..+... ....++++|||++++++.. ++.|.++|+.+++. .....+.+.
T Consensus 112 sviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~v--v~tI~v~g~~~~~P~g~ 189 (386)
T 3sjl_D 112 EVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAF--KRMLDVPDCYHIFPTAP 189 (386)
T ss_dssp EEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEE--EEEEECCSEEEEEEEET
T ss_pred EEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcE--EEEEECCCcceeecCCC
Confidence 99999999998888643 2445999999999998864 68999999988764 222211110
Q ss_pred -------------------ccceE----------------EEEEc-CCCcEEEEEecCCeEEEEECCCCe--EEEEeec-
Q 024185 136 -------------------TAEVC----------------DIKFS-NDGKSMLLTTTNNNIYVLDAYGGE--KRCGFSL- 176 (271)
Q Consensus 136 -------------------~~~v~----------------~~~~s-~~~~~l~~~~~d~~i~~~d~~~~~--~~~~~~~- 176 (271)
.+.+. ...|. ++|++++ .+.+|.+.+.|+.++. ....+..
T Consensus 190 ~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~ 268 (386)
T 3sjl_D 190 DTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEAL 268 (386)
T ss_dssp TEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEESS
T ss_pred ceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecceecc
Confidence 01110 01222 3443333 4446677777765443 2222220
Q ss_pred -------CCCCCceeeEEECCCCCEEEEecC----------CCcEEEEEcCCceeEEEecCCcceeEEEEEecCCc-EEE
Q 024185 177 -------EPSPNTNTEATFTPDGQYVVSGSG----------DGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRA-MFV 238 (271)
Q Consensus 177 -------~~~~~~v~~~~~~~~~~~l~~~~~----------dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~ 238 (271)
...+.....++++|+++.++.... .+.|.+.|+++++.+..+.. ...+.+++++||++ +|+
T Consensus 269 ~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~v-g~~~~~lavs~D~~~~ly 347 (386)
T 3sjl_D 269 TEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEM-GHEIDSINVSQDEKPLLY 347 (386)
T ss_dssp CHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE-EEEECEEEECSSSSCEEE
T ss_pred ccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEEC-CCCcceEEECCCCCeEEE
Confidence 000112334788999998887642 25799999999999998864 34678999999996 666
Q ss_pred EeC---CeEEEEcCCCCCCCcCCC
Q 024185 239 AAS---SVLSFWIPNPSSNSTDES 259 (271)
Q Consensus 239 ~~~---~~v~iw~~~~~~~~~~~~ 259 (271)
++. ++|.++|..+++......
T Consensus 348 ~tn~~~~~VsViD~~t~k~~~~i~ 371 (386)
T 3sjl_D 348 ALSTGDKTLYIHDAESGEELRSVN 371 (386)
T ss_dssp EEETTTTEEEEEETTTCCEEEEEC
T ss_pred EEcCCCCeEEEEECCCCcEEEEec
Confidence 643 889999999999876665
No 200
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.60 E-value=9.2e-12 Score=97.07 Aligned_cols=221 Identities=9% Similarity=0.009 Sum_probs=150.3
Q ss_pred eeEEeeec-ceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEec
Q 024185 12 QALLFARQ-NIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILRL 90 (271)
Q Consensus 12 ~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 90 (271)
..+.++.. ++.+..++.. +... ..........+..+++.+++.. .++...++.|..||.+ ++. ..+..
T Consensus 26 g~l~v~~~~~~~v~~~d~~-~~~~---~~~~~~~~~~~~~i~~~~~g~l-----~v~~~~~~~i~~~~~~-g~~-~~~~~ 94 (299)
T 2z2n_A 26 GKVWITQHKANMISCINLD-GKIT---EYPLPTPDAKVMCLTISSDGEV-----WFTENAANKIGRITKK-GII-KEYTL 94 (299)
T ss_dssp SCEEEEETTTTEEEEECTT-CCEE---EEECSSTTCCEEEEEECTTSCE-----EEEETTTTEEEEECTT-SCE-EEEEC
T ss_pred CCEEEEecCCCcEEEEcCC-CCeE---EecCCcccCceeeEEECCCCCE-----EEeCCCCCeEEEECCC-CcE-EEEeC
Confidence 44555544 4566666654 3211 1112234467888999999886 4555567889999876 332 23321
Q ss_pred ----CCcceEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEecCCeEEEEECC
Q 024185 91 ----RGRPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAY 166 (271)
Q Consensus 91 ----~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~ 166 (271)
.....+++.++++++++...++.|..||. +++. .......+...+..+++.++|+..++...++.|..||.
T Consensus 95 ~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~---~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~- 169 (299)
T 2z2n_A 95 PNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKI---REYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE- 169 (299)
T ss_dssp SSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCE---EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-
T ss_pred CCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCE---EEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-
Confidence 23455899999987777767889999998 4442 23333334567899999999987776666789999998
Q ss_pred CCeEEEEeecCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCCceeEEE-ecCCcceeEEEEEecCCcEEEEeC--Ce
Q 024185 167 GGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVAC-WNGNIGVVACLKWAPRRAMFVAAS--SV 243 (271)
Q Consensus 167 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~~~~--~~ 243 (271)
+++... +........+..++++++|++.++...++.|..||. +++.... ...+...+.+++++++|+++++.. +.
T Consensus 170 ~g~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~ 247 (299)
T 2z2n_A 170 SGDITE-FKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTEWGANK 247 (299)
T ss_dssp TCCEEE-EECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTE
T ss_pred CCcEEE-eeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEeccCCce
Confidence 666543 222222234788999999998777777889999999 6664332 333456788999999999777763 78
Q ss_pred EEEEcCC
Q 024185 244 LSFWIPN 250 (271)
Q Consensus 244 v~iw~~~ 250 (271)
|..||..
T Consensus 248 i~~~d~~ 254 (299)
T 2z2n_A 248 IGRLTSN 254 (299)
T ss_dssp EEEEETT
T ss_pred EEEECCC
Confidence 9999983
No 201
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.59 E-value=2.8e-13 Score=119.15 Aligned_cols=199 Identities=9% Similarity=-0.071 Sum_probs=128.6
Q ss_pred ceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEe-cCCcceEEEcCCCCEEEEEecCCe-----------
Q 024185 46 GIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILR-LRGRPTVAFDQQGLVFAVAMEAGA----------- 113 (271)
Q Consensus 46 ~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~d~~----------- 113 (271)
..+....|||||+.+++..--.|+....|++||+++++.+.... ......++|+|| +.|+.++.++.
T Consensus 163 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~ 241 (741)
T 1yr2_A 163 TALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNY 241 (741)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC--------CCC
T ss_pred EEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCCceeccEEEECC-CEEEEEEecCcccccccccCCC
Confidence 46778999999998433100001112579999999998755421 111246899999 98988876553
Q ss_pred ---EEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEecCC-----eEEEEECCCC--eEEEEeecCCCCCce
Q 024185 114 ---IKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNN-----NIYVLDAYGG--EKRCGFSLEPSPNTN 183 (271)
Q Consensus 114 ---i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~-----~i~~~d~~~~--~~~~~~~~~~~~~~v 183 (271)
|++|++.+++...........+...+..+.|||||++|+..+.++ .|++||+.++ +....+..+... .
T Consensus 242 ~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~--~ 319 (741)
T 1yr2_A 242 NQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKA--Q 319 (741)
T ss_dssp CCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSS--C
T ss_pred CCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCc--e
Confidence 899998776531112333233334588999999999998877544 8999999877 313445444332 3
Q ss_pred eeEEECCCCCEEEEecCC----CcEEEEEcCCc--eeEEEecCCcceeEEEEEecCCcEEEEeC--CeEEEEcC
Q 024185 184 TEATFTPDGQYVVSGSGD----GTLHAWNINTR--NEVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIP 249 (271)
Q Consensus 184 ~~~~~~~~~~~l~~~~~d----g~i~iwd~~~~--~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~~v~iw~~ 249 (271)
... ++|+|+.|+..+.+ +.|.+||+.++ +....+..+...+..++|+ ++.++++.. +..++|.+
T Consensus 320 ~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~ 391 (741)
T 1yr2_A 320 WDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAF 391 (741)
T ss_dssp EEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEE
T ss_pred EEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEE
Confidence 333 34899988877653 45999999874 3444455555667778887 556666664 55555543
No 202
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.57 E-value=7.5e-13 Score=107.79 Aligned_cols=229 Identities=9% Similarity=-0.031 Sum_probs=147.4
Q ss_pred eeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhh-----hhhccCceEEEEEecCcceeEEEecC----
Q 024185 21 IILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCL-----VLLTTALEYGIFVLMLASFQGILRLR---- 91 (271)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l-----~s~~~dg~i~iwd~~~~~~~~~~~~~---- 91 (271)
+.+..++..+. ..+..+...... .+.++|+++.+++... ..|..++.|.++|..+++.+..+...
T Consensus 99 ~~VsVID~~t~----~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r 172 (426)
T 3c75_H 99 TQQFVIDGSTG----RILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPR 172 (426)
T ss_dssp EEEEEEETTTT----EEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCC
T ss_pred CeEEEEECCCC----EEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccc
Confidence 68888887776 333334443444 6999999998433100 00124779999999999998888643
Q ss_pred -----CcceEEEcCCCCEEEEEec--CCeEEEEeCCCCCCCcceEEEecCC-----ccceEEEE----------------
Q 024185 92 -----GRPTVAFDQQGLVFAVAME--AGAIKLFDSRSYDKGPFDTFLVGGD-----TAEVCDIK---------------- 143 (271)
Q Consensus 92 -----~~~~~~~~~~~~~l~~~~~--d~~i~i~d~~~~~~~~~~~~~~~~~-----~~~v~~~~---------------- 143 (271)
....+.++|||++++++.. ++.|.+.|+.+.+. .....+.+. .+.-..+.
T Consensus 173 ~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kv--v~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~ 250 (426)
T 3c75_H 173 FLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTF--DRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFADGE 250 (426)
T ss_dssp CCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEE--EEEEECCSEEEEEEEETTEEEEEETTSSEEEEECCTTC
T ss_pred cccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeE--EEEEEcCCceeeccCCCcEEEEEcCCCCEEEEECCCCc
Confidence 2344999999999999874 57899999998775 222222110 00001122
Q ss_pred ---------------------EcCCCcEEEEEecCCeEEEEECCCCeEE--EEeecCC--------CCCceeeEEECCCC
Q 024185 144 ---------------------FSNDGKSMLLTTTNNNIYVLDAYGGEKR--CGFSLEP--------SPNTNTEATFTPDG 192 (271)
Q Consensus 144 ---------------------~s~~~~~l~~~~~d~~i~~~d~~~~~~~--~~~~~~~--------~~~~v~~~~~~~~~ 192 (271)
+.+++..++..+..+.+.+.|....+.. ..+.... .+.....+.++|++
T Consensus 251 v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg 330 (426)
T 3c75_H 251 TKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQS 330 (426)
T ss_dssp CEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGG
T ss_pred EEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCC
Confidence 3444444444444556666665443321 1111000 00112237899999
Q ss_pred CEEEEecC----------CCcEEEEEcCCceeEEEecCCcceeEEEEEecCCc-EEEEeC---CeEEEEcCCCCCCCcCC
Q 024185 193 QYVVSGSG----------DGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRA-MFVAAS---SVLSFWIPNPSSNSTDE 258 (271)
Q Consensus 193 ~~l~~~~~----------dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~---~~v~iw~~~~~~~~~~~ 258 (271)
++++.... ++.|.+.|..+++.+.++... ....+++|+|||+ +++++. ++|.++|+.+++.....
T Consensus 331 ~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg-~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 331 DRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELG-HEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp TEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred CEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECC-CCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 87776642 357999999999999998643 3478999999998 777764 88999999999987663
No 203
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.57 E-value=4.1e-12 Score=99.46 Aligned_cols=211 Identities=11% Similarity=0.034 Sum_probs=137.3
Q ss_pred ceeEEee-ecceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEe
Q 024185 11 TQALLFA-RQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILR 89 (271)
Q Consensus 11 ~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 89 (271)
.+.+++. ..++.+..++...+.. +.+. ....+.++++++++++ +++ . ++.|.+||.++++......
T Consensus 24 ~~~l~~~d~~~~~i~~~d~~~~~~-----~~~~-~~~~~~~i~~~~dG~l-----~v~-~-~~~l~~~d~~~g~~~~~~~ 90 (297)
T 3g4e_A 24 SNSLLFVDIPAKKVCRWDSFTKQV-----QRVT-MDAPVSSVALRQSGGY-----VAT-I-GTKFCALNWKEQSAVVLAT 90 (297)
T ss_dssp TTEEEEEETTTTEEEEEETTTCCE-----EEEE-CSSCEEEEEEBTTSSE-----EEE-E-TTEEEEEETTTTEEEEEEE
T ss_pred CCEEEEEECCCCEEEEEECCCCcE-----EEEe-CCCceEEEEECCCCCE-----EEE-E-CCeEEEEECCCCcEEEEEe
Confidence 3455554 3466777777655422 1122 2456888999999996 222 2 5679999998876543332
Q ss_pred cC------CcceEEEcCCCCEEEEEecC-----------CeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEE
Q 024185 90 LR------GRPTVAFDQQGLVFAVAMEA-----------GAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSML 152 (271)
Q Consensus 90 ~~------~~~~~~~~~~~~~l~~~~~d-----------~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 152 (271)
.. ..+.++++|+|+++++.... +.|+.++.. ++ ...+..+......++|+||++.++
T Consensus 91 ~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~-----~~~~~~~~~~pngi~~spdg~~ly 164 (297)
T 3g4e_A 91 VDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HH-----VKKYFDQVDISNGLDWSLDHKIFY 164 (297)
T ss_dssp CCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SC-----EEEEEEEESBEEEEEECTTSCEEE
T ss_pred cCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CC-----EEEEeeccccccceEEcCCCCEEE
Confidence 21 13458999999966654321 344444443 22 111222334567899999998775
Q ss_pred EE-ecCCeEEEEEC--CCCeEE--EEeec-CCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCCceeEEEecCCcceeE
Q 024185 153 LT-TTNNNIYVLDA--YGGEKR--CGFSL-EPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVA 226 (271)
Q Consensus 153 ~~-~~d~~i~~~d~--~~~~~~--~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~ 226 (271)
.+ +.++.|..||+ .+++.. +.+.. .........++++++|++.++...++.|..||..+++.+..+..+...++
T Consensus 165 v~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t 244 (297)
T 3g4e_A 165 YIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTT 244 (297)
T ss_dssp EEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEE
T ss_pred EecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCce
Confidence 54 55789999987 455432 12211 11113467899999999888877788899999999999998887767799
Q ss_pred EEEEe-cCCcEEEEe
Q 024185 227 CLKWA-PRRAMFVAA 240 (271)
Q Consensus 227 ~~~~s-~~~~~l~~~ 240 (271)
+++|. |+++.|..+
T Consensus 245 ~~~f~g~d~~~L~vt 259 (297)
T 3g4e_A 245 SCCFGGKNYSEMYVT 259 (297)
T ss_dssp EEEEESGGGCEEEEE
T ss_pred EEEEeCCCCCEEEEE
Confidence 99998 887755444
No 204
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.55 E-value=1.4e-11 Score=100.80 Aligned_cols=221 Identities=8% Similarity=-0.004 Sum_probs=140.9
Q ss_pred eeEEeee-cceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCc--eEEEEEecCcceeEEE
Q 024185 12 QALLFAR-QNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTAL--EYGIFVLMLASFQGIL 88 (271)
Q Consensus 12 ~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~ 88 (271)
..|+++. .+..+..++...+... ..... ..... ++++++++. ++.+..++ .|..++...+.....+
T Consensus 142 g~lyv~d~~~~~I~~id~~~g~~~----~~~~~-~~~~~-ia~~~~g~~-----l~~~d~~~~~~I~~~d~~~~~~~~~~ 210 (409)
T 3hrp_A 142 NTVLAYQRDDPRVRLISVDDNKVT----TVHPG-FKGGK-PAVTKDKQR-----VYSIGWEGTHTVYVYMKASGWAPTRI 210 (409)
T ss_dssp TEEEEEETTTTEEEEEETTTTEEE----EEEET-CCBCB-CEECTTSSE-----EEEEBSSTTCEEEEEEGGGTTCEEEE
T ss_pred CCEEEEecCCCcEEEEECCCCEEE----Eeecc-CCCCc-eeEecCCCc-----EEEEecCCCceEEEEEcCCCceeEEe
Confidence 4455443 3466777766555221 22222 22223 889999987 44555544 7888888766554444
Q ss_pred ------ecCCcceEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcceEEE---ecCCccce--EEEEEcCC-CcEEEEEec
Q 024185 89 ------RLRGRPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFL---VGGDTAEV--CDIKFSND-GKSMLLTTT 156 (271)
Q Consensus 89 ------~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~---~~~~~~~v--~~~~~s~~-~~~l~~~~~ 156 (271)
.......++++|++..|+++..++.|+.||..++.. .... ..++...- ..++|+|+ +.++++-..
T Consensus 211 g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~---~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~ 287 (409)
T 3hrp_A 211 GQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEV---TLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQN 287 (409)
T ss_dssp EECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCE---EEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETT
T ss_pred eeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCE---EEEecccccCCCCCCccccEEEeCCCCEEEEEeCC
Confidence 223456699999666666677788999999987653 1110 12222222 38999995 555555566
Q ss_pred CCeEEEEECCCCeEEEEeecCC-C------------CCceeeEEECCCCCEEEEec-CCCcEEEEEcCCceeEEEecCC-
Q 024185 157 NNNIYVLDAYGGEKRCGFSLEP-S------------PNTNTEATFTPDGQYVVSGS-GDGTLHAWNINTRNEVACWNGN- 221 (271)
Q Consensus 157 d~~i~~~d~~~~~~~~~~~~~~-~------------~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~- 221 (271)
++.|+.|+.... ...+.+.. . -.....++++|+|+++++-. .++.|+.||+.+++.. .+.++
T Consensus 288 ~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~-~~~g~~ 364 (409)
T 3hrp_A 288 LSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVS-TVAGQV 364 (409)
T ss_dssp TTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEE-EEEECT
T ss_pred CCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEE-EEeCCC
Confidence 889999997543 23333222 0 12367899999999888877 8899999998777643 33333
Q ss_pred --------------cceeEEEEEecCCcEEEEeC--CeEEEEcC
Q 024185 222 --------------IGVVACLKWAPRRAMFVAAS--SVLSFWIP 249 (271)
Q Consensus 222 --------------~~~v~~~~~s~~~~~l~~~~--~~v~iw~~ 249 (271)
-.....++++|+|.++++-. +.|+.+++
T Consensus 365 ~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 365 DVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp TCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred CCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 13478999999988777765 56777664
No 205
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.55 E-value=6.9e-13 Score=115.73 Aligned_cols=204 Identities=8% Similarity=-0.059 Sum_probs=135.0
Q ss_pred ccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEE-ecCCcceEEEcCCCCEEEEEecCC----------
Q 024185 44 SKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGIL-RLRGRPTVAFDQQGLVFAVAMEAG---------- 112 (271)
Q Consensus 44 ~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~d~---------- 112 (271)
+...+..+.|||||+.+++..-..|+....|++||+++++.+... .......++|+ |++.|+.++.+.
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~ 205 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSART 205 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESCCCEEE-TTTEEEEEESSCCC-------C
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCceeccEEEe-CCCEEEEEEecCcccccccccC
Confidence 445678889999999844311114455578999999999865432 22223558999 999999887764
Q ss_pred ---eEEEEeCCCCCCCcceEEEecC-CccceEEEEEcCCCcEEEEEec----CCeEEEEECCCCe-EEEEeecCCCCCce
Q 024185 113 ---AIKLFDSRSYDKGPFDTFLVGG-DTAEVCDIKFSNDGKSMLLTTT----NNNIYVLDAYGGE-KRCGFSLEPSPNTN 183 (271)
Q Consensus 113 ---~i~i~d~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~----d~~i~~~d~~~~~-~~~~~~~~~~~~~v 183 (271)
.|++|++.+............. |......+.|+|||++|+.... +..++++|+.+++ ....+..+... .
T Consensus 206 ~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~--~ 283 (693)
T 3iuj_A 206 DQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDA--D 283 (693)
T ss_dssp CCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSS--C
T ss_pred CCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCc--e
Confidence 4999998876532222333333 3445788999999998866543 3589999997763 33444444432 3
Q ss_pred eeEEECCCCCEEEEe-cCC---CcEEEEEcCCcee--EEEecCCcceeEEEEEecCCcEEEEeC-----CeEEEEcCCCC
Q 024185 184 TEATFTPDGQYVVSG-SGD---GTLHAWNINTRNE--VACWNGNIGVVACLKWAPRRAMFVAAS-----SVLSFWIPNPS 252 (271)
Q Consensus 184 ~~~~~~~~~~~l~~~-~~d---g~i~iwd~~~~~~--~~~~~~~~~~v~~~~~s~~~~~l~~~~-----~~v~iw~~~~~ 252 (271)
... ++++|..++.. ..+ +.|..+|+.++.. ...+..|...+. .|+++++.|+... ..|++|+++++
T Consensus 284 ~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~ 360 (693)
T 3iuj_A 284 VSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEGK 360 (693)
T ss_dssp EEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTSC
T ss_pred EEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCCC
Confidence 333 66776655544 333 5799999987654 344555555554 8999999887765 25999998765
Q ss_pred C
Q 024185 253 S 253 (271)
Q Consensus 253 ~ 253 (271)
.
T Consensus 361 ~ 361 (693)
T 3iuj_A 361 R 361 (693)
T ss_dssp E
T ss_pred e
Confidence 3
No 206
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.55 E-value=1.7e-12 Score=114.14 Aligned_cols=230 Identities=12% Similarity=0.052 Sum_probs=143.2
Q ss_pred ecceeEEeeecc-----eeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCc-----------
Q 024185 9 PITQALLFARQN-----IILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTAL----------- 72 (271)
Q Consensus 9 ~~~~~l~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg----------- 72 (271)
|..+.++++... ..+..++...+..... ..+...+..++|+|+ +. |+.++.++
T Consensus 172 PDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~-----~~~~~~~~~~~wspD-~~-----l~~~~~~~~~~~~~~~~~~ 240 (741)
T 1yr2_A 172 DDGRLLAYSVQDGGSDWRTVKFVGVADGKPLAD-----ELKWVKFSGLAWLGN-DA-----LLYSRFAEPKEGQAFQALN 240 (741)
T ss_dssp TTSSEEEEEEEETTCSEEEEEEEETTTCCEEEE-----EEEEEESCCCEESTT-SE-----EEEEECCCC--------CC
T ss_pred CCCCEEEEEEcCCCCceEEEEEEECCCCCCCCc-----cCCCceeccEEEECC-CE-----EEEEEecCcccccccccCC
Confidence 555667776543 3566777666532111 111112356889999 77 44444443
Q ss_pred ---eEEEEEecCcce--eEEEecCC----cceEEEcCCCCEEEEEecCC-----eEEEEeCCCCCCCcceEEEecCCccc
Q 024185 73 ---EYGIFVLMLASF--QGILRLRG----RPTVAFDQQGLVFAVAMEAG-----AIKLFDSRSYDKGPFDTFLVGGDTAE 138 (271)
Q Consensus 73 ---~i~iwd~~~~~~--~~~~~~~~----~~~~~~~~~~~~l~~~~~d~-----~i~i~d~~~~~~~~~~~~~~~~~~~~ 138 (271)
.|++|++.++.. ...+.... ...+.|+|||++|+..+.++ .|++||+.++.... ...+..+...
T Consensus 241 ~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~--~~~l~~~~~~ 318 (741)
T 1yr2_A 241 YNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGP--VTALIPDLKA 318 (741)
T ss_dssp CCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECC--CEEEECSSSS
T ss_pred CCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcc--cEEecCCCCc
Confidence 488999877652 22333321 34589999999988876543 89999998762110 1122234444
Q ss_pred eEEEEEcCCCcEEEEEec----CCeEEEEECCCC-eEEEEeecCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcC-Cc
Q 024185 139 VCDIKFSNDGKSMLLTTT----NNNIYVLDAYGG-EKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNIN-TR 212 (271)
Q Consensus 139 v~~~~~s~~~~~l~~~~~----d~~i~~~d~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~-~~ 212 (271)
.... ++|+|+.|+..+. ++.|.+||+.++ .....+..+.. ..+..++++ ++.++++...|+..++|.+. ++
T Consensus 319 ~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~-~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g 395 (741)
T 1yr2_A 319 QWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESK-DNLESVGIA-GNRLFASYIHDAKSQVLAFDLDG 395 (741)
T ss_dssp CEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCS-SEEEEEEEE-BTEEEEEEEETTEEEEEEEETTS
T ss_pred eEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCC-CeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCC
Confidence 4444 3588998888775 456999999874 23333332222 236667777 56677788888877776554 46
Q ss_pred eeEEEecC-CcceeEEEEEecCCcEEEEe--C----CeEEEEcCCCCCC
Q 024185 213 NEVACWNG-NIGVVACLKWAPRRAMFVAA--S----SVLSFWIPNPSSN 254 (271)
Q Consensus 213 ~~~~~~~~-~~~~v~~~~~s~~~~~l~~~--~----~~v~iw~~~~~~~ 254 (271)
+....+.. +.+.+..++++|+++.++.. + +++++||+.+++.
T Consensus 396 ~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~ 444 (741)
T 1yr2_A 396 KPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAKT 444 (741)
T ss_dssp CEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTEE
T ss_pred CceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 66666654 35678899999998755522 2 6799999988653
No 207
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.55 E-value=2.9e-12 Score=100.36 Aligned_cols=202 Identities=12% Similarity=0.027 Sum_probs=131.1
Q ss_pred cceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEe-cCCcceEEEcCCCCEEEEEecCCeEEEEeCCCCC
Q 024185 45 KGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILR-LRGRPTVAFDQQGLVFAVAMEAGAIKLFDSRSYD 123 (271)
Q Consensus 45 ~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~ 123 (271)
..-..+..|+|++..+ +++...++.|+.||.++++.. .+. ...+..++++++|++++ +. ++.|.+||.++++
T Consensus 12 ~~~~Egp~w~~~~~~l----~~~d~~~~~i~~~d~~~~~~~-~~~~~~~~~~i~~~~dG~l~v-~~-~~~l~~~d~~~g~ 84 (297)
T 3g4e_A 12 CRCGESPVWEEVSNSL----LFVDIPAKKVCRWDSFTKQVQ-RVTMDAPVSSVALRQSGGYVA-TI-GTKFCALNWKEQS 84 (297)
T ss_dssp CSBEEEEEEETTTTEE----EEEETTTTEEEEEETTTCCEE-EEECSSCEEEEEEBTTSSEEE-EE-TTEEEEEETTTTE
T ss_pred CccccCCeEECCCCEE----EEEECCCCEEEEEECCCCcEE-EEeCCCceEEEEECCCCCEEE-EE-CCeEEEEECCCCc
Confidence 3344567888865543 446677899999999887653 333 33466799999999544 44 5689999998766
Q ss_pred CCcceEEEec--CCccceEEEEEcCCCcEEEEEec-----------CCeEEEEECCCCeEEEEeecCCCCCceeeEEECC
Q 024185 124 KGPFDTFLVG--GDTAEVCDIKFSNDGKSMLLTTT-----------NNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTP 190 (271)
Q Consensus 124 ~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~-----------d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~ 190 (271)
. ....... .....+.+++++|+|+++++... .+.|..+|.. ++...... .. .....++|+|
T Consensus 85 ~--~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~~~~~-~~--~~pngi~~sp 158 (297)
T 3g4e_A 85 A--VVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHVKKYFD-QV--DISNGLDWSL 158 (297)
T ss_dssp E--EEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCEEEEEE-EE--SBEEEEEECT
T ss_pred E--EEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CCEEEEee-cc--ccccceEEcC
Confidence 3 1111111 12245789999999996665432 2344444432 33332222 21 1256799999
Q ss_pred CCCEEE-EecCCCcEEEEEc--CCcee-----EEEecCCcceeEEEEEecCCcEEEEeC--CeEEEEcCCCCCCCcCCC
Q 024185 191 DGQYVV-SGSGDGTLHAWNI--NTRNE-----VACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNPSSNSTDES 259 (271)
Q Consensus 191 ~~~~l~-~~~~dg~i~iwd~--~~~~~-----~~~~~~~~~~v~~~~~s~~~~~l~~~~--~~v~iw~~~~~~~~~~~~ 259 (271)
|++.++ +.+.++.|.+||+ .++.. ...+..+.+....++++++|++.++.. +.|..||.++++......
T Consensus 159 dg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~ 237 (297)
T 3g4e_A 159 DHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVK 237 (297)
T ss_dssp TSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEE
T ss_pred CCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEE
Confidence 998775 4455789999997 45543 223333445678999999998777764 679999999887655443
No 208
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.53 E-value=5.8e-12 Score=102.98 Aligned_cols=199 Identities=7% Similarity=-0.046 Sum_probs=135.4
Q ss_pred eEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEecCCcceEEEcCCCCEEEEEecCC--eEEEEeCCCCCC
Q 024185 47 IRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILRLRGRPTVAFDQQGLVFAVAMEAG--AIKLFDSRSYDK 124 (271)
Q Consensus 47 ~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~--~i~i~d~~~~~~ 124 (271)
....++++++++. +++...++.|+.||.+++.............++|+++++.|+++..++ .|..++......
T Consensus 132 ~P~~la~d~~g~l-----yv~d~~~~~I~~id~~~g~~~~~~~~~~~~~ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~ 206 (409)
T 3hrp_A 132 YMWGIAAVGNNTV-----LAYQRDDPRVRLISVDDNKVTTVHPGFKGGKPAVTKDKQRVYSIGWEGTHTVYVYMKASGWA 206 (409)
T ss_dssp CEEEEEECSTTEE-----EEEETTTTEEEEEETTTTEEEEEEETCCBCBCEECTTSSEEEEEBSSTTCEEEEEEGGGTTC
T ss_pred CceEEEEeCCCCE-----EEEecCCCcEEEEECCCCEEEEeeccCCCCceeEecCCCcEEEEecCCCceEEEEEcCCCce
Confidence 5667899999986 556677899999999888766555554434499999999999887765 799999876543
Q ss_pred CcceEE-Ee-cCCccceEEEEEcCCCcEEEEEecCCeEEEEECCCCeEEEE----eecCCCCCceeeEEECCC-CCEEEE
Q 024185 125 GPFDTF-LV-GGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCG----FSLEPSPNTNTEATFTPD-GQYVVS 197 (271)
Q Consensus 125 ~~~~~~-~~-~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~~~~~~~~----~~~~~~~~~v~~~~~~~~-~~~l~~ 197 (271)
.... .+ ......+.+++++|++..|+++..++.|+.||..++..... ........+...++|+|+ +.++++
T Consensus 207 --~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~ 284 (409)
T 3hrp_A 207 --PTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMS 284 (409)
T ss_dssp --EEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEE
T ss_pred --eEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEE
Confidence 1111 11 21446678899999555566677788999999987753322 111111110127999995 555566
Q ss_pred ecCCCcEEEEEcCCceeEEEecCCc---------------ceeEEEEEecCCcEEEEeC---CeEEEEcCCCCCC
Q 024185 198 GSGDGTLHAWNINTRNEVACWNGNI---------------GVVACLKWAPRRAMFVAAS---SVLSFWIPNPSSN 254 (271)
Q Consensus 198 ~~~dg~i~iwd~~~~~~~~~~~~~~---------------~~v~~~~~s~~~~~l~~~~---~~v~iw~~~~~~~ 254 (271)
-..++.|+.|+.... +..+.++. .....++++|+|+++++-+ +.|+.|++.++..
T Consensus 285 d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v 357 (409)
T 3hrp_A 285 DQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYV 357 (409)
T ss_dssp ETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEE
T ss_pred eCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEE
Confidence 666889999997543 33332221 2368999999999766654 6799999766653
No 209
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.53 E-value=1.3e-10 Score=90.63 Aligned_cols=221 Identities=11% Similarity=0.044 Sum_probs=148.9
Q ss_pred eeEEeee-cceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEec
Q 024185 12 QALLFAR-QNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILRL 90 (271)
Q Consensus 12 ~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 90 (271)
..+.++. .++.+..++.. +.... .........+..+++.+++.. .++...++.|..+|.. ++.. .+..
T Consensus 31 g~l~v~~~~~~~v~~~~~~-~~~~~---~~~~~~~~~~~~i~~~~~g~l-----~v~~~~~~~v~~~d~~-g~~~-~~~~ 99 (300)
T 2qc5_A 31 GKVWFTQHKANKISSLDQS-GRIKE---FEVPTPDAKVMCLIVSSLGDI-----WFTENGANKIGKLSKK-GGFT-EYPL 99 (300)
T ss_dssp SCEEEEETTTTEEEEECTT-SCEEE---EECSSTTCCEEEEEECTTSCE-----EEEETTTTEEEEECTT-SCEE-EEEC
T ss_pred CCEEEEcCCCCeEEEECCC-CceEE---EECCCCCCcceeEEECCCCCE-----EEEecCCCeEEEECCC-CCeE-EecC
Confidence 3455554 34666666654 32111 112233456778899998886 4455567889999987 5543 3322
Q ss_pred ----CCcceEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEecCCeEEEEECC
Q 024185 91 ----RGRPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAY 166 (271)
Q Consensus 91 ----~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~ 166 (271)
.....+++.++++++++...++.|..+|.. ++. ....+......+..+++.++|+..++...++.|..+|.
T Consensus 100 ~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~---~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~- 174 (300)
T 2qc5_A 100 PQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTI---YEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN- 174 (300)
T ss_dssp SSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCE---EEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-
T ss_pred CCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCE---EEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-
Confidence 235568999999877777667899999987 442 23333334567899999999996666556789999998
Q ss_pred CCeEEEEeecCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCCceeEEE-ecCCcceeEEEEEecCCcEEEEeC--Ce
Q 024185 167 GGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVAC-WNGNIGVVACLKWAPRRAMFVAAS--SV 243 (271)
Q Consensus 167 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~~~~--~~ 243 (271)
+++... +........+..++++++|++.++....+.|.+||. +++.... +..+...+.+++++++|+++++.. +.
T Consensus 175 ~g~~~~-~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~ 252 (300)
T 2qc5_A 175 TGKLEE-YPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQ 252 (300)
T ss_dssp TCCEEE-EECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTE
T ss_pred CCcEEE-eeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEeccCCCe
Confidence 555443 332222234788999999988777777788999998 5544332 333455688999999999777763 78
Q ss_pred EEEEcCC
Q 024185 244 LSFWIPN 250 (271)
Q Consensus 244 v~iw~~~ 250 (271)
|..|+..
T Consensus 253 i~~~~~~ 259 (300)
T 2qc5_A 253 IGRITND 259 (300)
T ss_dssp EEEECTT
T ss_pred EEEECCC
Confidence 9999983
No 210
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.52 E-value=1.5e-11 Score=96.75 Aligned_cols=196 Identities=12% Similarity=0.056 Sum_probs=130.9
Q ss_pred eEEeeEEecCCchhhhhhhhh-------hccCceEEEEEecCcceeEEEe------cCCcceEEEcCC-CCEEEEEecCC
Q 024185 47 IRRGLFLSACLQLMIALCLVL-------LTTALEYGIFVLMLASFQGILR------LRGRPTVAFDQQ-GLVFAVAMEAG 112 (271)
Q Consensus 47 ~v~~~~~s~~~~~~~~~~l~s-------~~~dg~i~iwd~~~~~~~~~~~------~~~~~~~~~~~~-~~~l~~~~~d~ 112 (271)
...+++|++++.. +++ +..++.|..||..+++...... ...+..++++++ ++ +.+++..+
T Consensus 19 ~~~~~~~~~~g~l-----~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~-l~v~~~~~ 92 (314)
T 1pjx_A 19 GAEGPVFDKNGDF-----YIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQ-LFVADMRL 92 (314)
T ss_dssp TCEEEEECTTSCE-----EEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSE-EEEEETTT
T ss_pred CccCceECCCCCE-----EEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCc-EEEEECCC
Confidence 4456888888876 455 5778999999988777543221 134556899999 65 44444455
Q ss_pred eEEEEeCCCCCCCcceEE-E-e--cCCccceEEEEEcCCCcEEEEEecC---------------CeEEEEECCCCeEEEE
Q 024185 113 AIKLFDSRSYDKGPFDTF-L-V--GGDTAEVCDIKFSNDGKSMLLTTTN---------------NNIYVLDAYGGEKRCG 173 (271)
Q Consensus 113 ~i~i~d~~~~~~~~~~~~-~-~--~~~~~~v~~~~~s~~~~~l~~~~~d---------------~~i~~~d~~~~~~~~~ 173 (271)
.|.+||.. ++. ... . . ......+.+++++++|+++++...+ +.|..||.. ++....
T Consensus 93 ~l~~~d~~-g~~---~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~ 167 (314)
T 1pjx_A 93 GLLVVQTD-GTF---EEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQV 167 (314)
T ss_dssp EEEEEETT-SCE---EECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEE
T ss_pred CEEEEeCC-CCE---EEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEe
Confidence 79999988 552 111 0 0 1112458899999999877766554 578888865 554333
Q ss_pred eecCCCCCceeeEEEC----CCCCEEEEe-cCCCcEEEEEcC-Cce-----eEEEecCCc-ceeEEEEEecCCcEEEEeC
Q 024185 174 FSLEPSPNTNTEATFT----PDGQYVVSG-SGDGTLHAWNIN-TRN-----EVACWNGNI-GVVACLKWAPRRAMFVAAS 241 (271)
Q Consensus 174 ~~~~~~~~~v~~~~~~----~~~~~l~~~-~~dg~i~iwd~~-~~~-----~~~~~~~~~-~~v~~~~~s~~~~~l~~~~ 241 (271)
... .. ....++++ |+++.++.+ ..++.|.+||.. +++ ....+..+. ..+..++++++|+++++..
T Consensus 168 ~~~-~~--~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~ 244 (314)
T 1pjx_A 168 DTA-FQ--FPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANW 244 (314)
T ss_dssp EEE-ES--SEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEE
T ss_pred ccC-CC--CcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEc
Confidence 222 11 25678999 999765544 567899999986 444 223344443 5678999999999888753
Q ss_pred --CeEEEEcCCCCCCCc
Q 024185 242 --SVLSFWIPNPSSNST 256 (271)
Q Consensus 242 --~~v~iw~~~~~~~~~ 256 (271)
+.|.+||.++++...
T Consensus 245 ~~~~i~~~d~~~g~~~~ 261 (314)
T 1pjx_A 245 GSSHIEVFGPDGGQPKM 261 (314)
T ss_dssp TTTEEEEECTTCBSCSE
T ss_pred CCCEEEEEcCCCCcEeE
Confidence 789999998666543
No 211
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.50 E-value=7.9e-11 Score=93.42 Aligned_cols=208 Identities=14% Similarity=0.074 Sum_probs=132.0
Q ss_pred eeEEee-ecceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEec
Q 024185 12 QALLFA-RQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILRL 90 (271)
Q Consensus 12 ~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 90 (271)
+.+++. ..++.+..++...+.. +.+. ....+.++++++++++ +++ +.+ .|.+||.++++.......
T Consensus 61 ~~l~~~d~~~~~i~~~d~~~~~~-----~~~~-~~~~v~~i~~~~dg~l-----~v~-~~~-gl~~~d~~~g~~~~~~~~ 127 (326)
T 2ghs_A 61 GTAWWFNILERELHELHLASGRK-----TVHA-LPFMGSALAKISDSKQ-----LIA-SDD-GLFLRDTATGVLTLHAEL 127 (326)
T ss_dssp TEEEEEEGGGTEEEEEETTTTEE-----EEEE-CSSCEEEEEEEETTEE-----EEE-ETT-EEEEEETTTCCEEEEECS
T ss_pred CEEEEEECCCCEEEEEECCCCcE-----EEEE-CCCcceEEEEeCCCeE-----EEE-ECC-CEEEEECCCCcEEEEeeC
Confidence 344443 3456666666544421 1122 2356888999999987 332 334 499999988775433321
Q ss_pred C------CcceEEEcCCCCEEEEEec------CCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEE-ecC
Q 024185 91 R------GRPTVAFDQQGLVFAVAME------AGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLT-TTN 157 (271)
Q Consensus 91 ~------~~~~~~~~~~~~~l~~~~~------d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~d 157 (271)
. ....++++|+|+++++... .+.|+.++ +++. ..+..+......++|+||++.++.+ +.+
T Consensus 128 ~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~-----~~~~~~~~~~~~i~~s~dg~~lyv~~~~~ 200 (326)
T 2ghs_A 128 ESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKV-----TKLFADISIPNSICFSPDGTTGYFVDTKV 200 (326)
T ss_dssp STTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEE-----EEEEEEESSEEEEEECTTSCEEEEEETTT
T ss_pred CCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcE-----EEeeCCCcccCCeEEcCCCCEEEEEECCC
Confidence 1 2345899999996665432 24566666 3332 1121223456789999999877655 457
Q ss_pred CeEEEEECC--CC-eEE--EEee-cCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCCceeEEEecCCcceeEEEEEe
Q 024185 158 NNIYVLDAY--GG-EKR--CGFS-LEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWA 231 (271)
Q Consensus 158 ~~i~~~d~~--~~-~~~--~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s 231 (271)
+.|.+||+. ++ +.. ..+. ..........++++++|++.++...++.|..||. +++.+..+..+...+.+++|+
T Consensus 201 ~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af~ 279 (326)
T 2ghs_A 201 NRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFI 279 (326)
T ss_dssp CEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEE
T ss_pred CEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEEe
Confidence 899999986 55 321 1221 1111233677999999998777766788999998 677777777666679999998
Q ss_pred -cCCcEEEEe
Q 024185 232 -PRRAMFVAA 240 (271)
Q Consensus 232 -~~~~~l~~~ 240 (271)
|+++.|+.+
T Consensus 280 g~d~~~L~vt 289 (326)
T 2ghs_A 280 GPDASRLLVT 289 (326)
T ss_dssp STTSCEEEEE
T ss_pred cCCCCEEEEE
Confidence 887766444
No 212
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.50 E-value=3.5e-13 Score=108.29 Aligned_cols=148 Identities=11% Similarity=0.024 Sum_probs=109.9
Q ss_pred CCcceEEEcCCCCEEEEEecCCeEEEEeCCCCC---------CCcceEEEecCCccceEEEEEcCCCcEEEEEecCCeEE
Q 024185 91 RGRPTVAFDQQGLVFAVAMEAGAIKLFDSRSYD---------KGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIY 161 (271)
Q Consensus 91 ~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~---------~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~ 161 (271)
..++.+++++...++++|+.+ .+.+|+++... ..+.... .+.. |+.++| |+++|+++ .++.|+
T Consensus 38 ~~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~---~lp~-V~~l~f--d~~~L~v~-~~~~l~ 109 (388)
T 1xip_A 38 ASLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEK---EIPD-VIFVCF--HGDQVLVS-TRNALY 109 (388)
T ss_dssp SCCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEE---ECTT-EEEEEE--ETTEEEEE-ESSEEE
T ss_pred ccccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEe---eCCC-eeEEEE--CCCEEEEE-cCCcEE
Confidence 356779999999999999977 56669865322 1111122 2455 999999 89999998 889999
Q ss_pred EEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCCceeEEEecCCcceeEEEEEecCCcEEEEeC
Q 024185 162 VLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS 241 (271)
Q Consensus 162 ~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 241 (271)
+||+++.........+... +.++.+.+. .+++++.||.+.+||+.++.... +...|++++|||+|..+....
T Consensus 110 v~dv~sl~~~~~~~~~~~~--v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG~~vg~~d 181 (388)
T 1xip_A 110 SLDLEELSEFRTVTSFEKP--VFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQLAVLLKD 181 (388)
T ss_dssp EEESSSTTCEEEEEECSSC--EEEEEECSS--EEEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSEEEEEETT
T ss_pred EEEchhhhccCccceeecc--eeeEEecCC--CEEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCceEEEEcC
Confidence 9999876655555555544 767766654 38888999999999999877654 446799999999994443334
Q ss_pred CeEEEEcCCCCCC
Q 024185 242 SVLSFWIPNPSSN 254 (271)
Q Consensus 242 ~~v~iw~~~~~~~ 254 (271)
|++++|+.+.++.
T Consensus 182 g~i~~~~~~~~~~ 194 (388)
T 1xip_A 182 RSFQSFAWRNGEM 194 (388)
T ss_dssp SCEEEEEEETTEE
T ss_pred CcEEEEcCCCccc
Confidence 9999999887764
No 213
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.49 E-value=3.7e-11 Score=95.33 Aligned_cols=194 Identities=12% Similarity=-0.011 Sum_probs=126.8
Q ss_pred eEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEecCCcceEEEcCCCCEEEEEecCCeEEEEeCCCCCCCc
Q 024185 47 IRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILRLRGRPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGP 126 (271)
Q Consensus 47 ~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~ 126 (271)
......|+|++..+ +++...++.|..||.++++.........+.+++++++++++++. +..|.+||..+++.
T Consensus 50 ~~egp~~~~~~~~l----~~~d~~~~~i~~~d~~~~~~~~~~~~~~v~~i~~~~dg~l~v~~--~~gl~~~d~~~g~~-- 121 (326)
T 2ghs_A 50 LGEGPTFDPASGTA----WWFNILERELHELHLASGRKTVHALPFMGSALAKISDSKQLIAS--DDGLFLRDTATGVL-- 121 (326)
T ss_dssp BEEEEEEETTTTEE----EEEEGGGTEEEEEETTTTEEEEEECSSCEEEEEEEETTEEEEEE--TTEEEEEETTTCCE--
T ss_pred CCcCCeEeCCCCEE----EEEECCCCEEEEEECCCCcEEEEECCCcceEEEEeCCCeEEEEE--CCCEEEEECCCCcE--
Confidence 34567899976543 44666788999999987764322223346678999999876654 34599999887763
Q ss_pred ceEEEec--CCccceEEEEEcCCCcEEEEEec------CCeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEe
Q 024185 127 FDTFLVG--GDTAEVCDIKFSNDGKSMLLTTT------NNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSG 198 (271)
Q Consensus 127 ~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~------d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 198 (271)
....... .....+.+++++|+|+++++... .+.|..++ +++...... ... ....++|+||++.++.+
T Consensus 122 ~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~-~~~--~~~~i~~s~dg~~lyv~ 196 (326)
T 2ghs_A 122 TLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFA-DIS--IPNSICFSPDGTTGYFV 196 (326)
T ss_dssp EEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEE-EES--SEEEEEECTTSCEEEEE
T ss_pred EEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeC-CCc--ccCCeEEcCCCCEEEEE
Confidence 1111111 11246889999999986665432 25666666 555433222 211 25679999999877554
Q ss_pred -cCCCcEEEEEcC--Cc-e-----eEEEecCCcceeEEEEEecCCcEEEEe--CCeEEEEcCCCCCC
Q 024185 199 -SGDGTLHAWNIN--TR-N-----EVACWNGNIGVVACLKWAPRRAMFVAA--SSVLSFWIPNPSSN 254 (271)
Q Consensus 199 -~~dg~i~iwd~~--~~-~-----~~~~~~~~~~~v~~~~~s~~~~~l~~~--~~~v~iw~~~~~~~ 254 (271)
+.++.|.+||+. ++ + ....+........+++++++|+++++. ++.|..||.. ++.
T Consensus 197 ~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~-g~~ 262 (326)
T 2ghs_A 197 DTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTD-GNH 262 (326)
T ss_dssp ETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTT-CCE
T ss_pred ECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECCC-CCE
Confidence 557899999986 55 3 223333344567889999999977776 3789999984 443
No 214
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.49 E-value=7e-11 Score=92.79 Aligned_cols=217 Identities=8% Similarity=0.056 Sum_probs=139.3
Q ss_pred ecceeEEee-ecceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEE
Q 024185 9 PITQALLFA-RQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGI 87 (271)
Q Consensus 9 ~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 87 (271)
|..+.|++. ..++.+..++. .+. .+.+..+...+..++++++|+. +++...++.|..|+.+ ++....
T Consensus 54 ~~g~~l~~~d~~~~~i~~~~~-~g~-----~~~~~~~~~~~~gl~~d~dG~l-----~v~~~~~~~v~~~~~~-g~~~~~ 121 (305)
T 3dr2_A 54 EAQRTLVWSDLVGRRVLGWRE-DGT-----VDVLLDATAFTNGNAVDAQQRL-----VHCEHGRRAITRSDAD-GQAHLL 121 (305)
T ss_dssp GGGTEEEEEETTTTEEEEEET-TSC-----EEEEEESCSCEEEEEECTTSCE-----EEEETTTTEEEEECTT-SCEEEE
T ss_pred CCCCEEEEEECCCCEEEEEeC-CCC-----EEEEeCCCCccceeeECCCCCE-----EEEECCCCEEEEECCC-CCEEEE
Confidence 333445554 44677777765 342 1234445667888999999986 4444556789999885 553322
Q ss_pred Eec------CCcceEEEcCCCCEEEE----Eec-------------CCeEEEEeCCCCCCCcceEEEecCCccceEEEEE
Q 024185 88 LRL------RGRPTVAFDQQGLVFAV----AME-------------AGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKF 144 (271)
Q Consensus 88 ~~~------~~~~~~~~~~~~~~l~~----~~~-------------d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~ 144 (271)
... .....++++++|+++++ |.. .+.|+.+|..+++. .... .......++|
T Consensus 122 ~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~----~~~~--~~~~p~gl~~ 195 (305)
T 3dr2_A 122 VGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPL----QRMA--DLDHPNGLAF 195 (305)
T ss_dssp ECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCC----EEEE--EESSEEEEEE
T ss_pred EeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcE----EEEe--cCCCCcceEE
Confidence 211 12456999999997775 321 25688888876664 1111 3345678999
Q ss_pred cCCCcEEEEEecC------CeEEEEECCCCeEE--EEeecCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCCceeEE
Q 024185 145 SNDGKSMLLTTTN------NNIYVLDAYGGEKR--CGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVA 216 (271)
Q Consensus 145 s~~~~~l~~~~~d------~~i~~~d~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 216 (271)
+||++.|+.+... +.|+.||+..+... ..+. .........++++++|++.+ ++.+ .|.+|+. +++.+.
T Consensus 196 spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~-~~~~~~pdgi~~d~~G~lwv-~~~~-gv~~~~~-~g~~~~ 271 (305)
T 3dr2_A 196 SPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFA-SVPDGLPDGFCVDRGGWLWS-SSGT-GVCVFDS-DGQLLG 271 (305)
T ss_dssp CTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEE-CCSSSCCCSEEECTTSCEEE-CCSS-EEEEECT-TSCEEE
T ss_pred cCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEE-ECCCCCCCeEEECCCCCEEE-ecCC-cEEEECC-CCCEEE
Confidence 9999988877665 78999998765421 1121 11112355689999999544 4444 4999998 577777
Q ss_pred EecCCcceeEEEEEecCCcEEEEeC-CeEEEEc
Q 024185 217 CWNGNIGVVACLKWAPRRAMFVAAS-SVLSFWI 248 (271)
Q Consensus 217 ~~~~~~~~v~~~~~s~~~~~l~~~~-~~v~iw~ 248 (271)
.+..+. .+.+++|+|+++.|..++ +.+..++
T Consensus 272 ~~~~~~-~~~~~~f~~d~~~L~it~~~~l~~~~ 303 (305)
T 3dr2_A 272 HIPTPG-TASNCTFDQAQQRLFITGGPCLWMLP 303 (305)
T ss_dssp EEECSS-CCCEEEECTTSCEEEEEETTEEEEEE
T ss_pred EEECCC-ceeEEEEeCCCCEEEEEcCCeEEEEE
Confidence 776554 588999999987666554 6555444
No 215
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.46 E-value=3.6e-10 Score=88.00 Aligned_cols=221 Identities=9% Similarity=0.022 Sum_probs=142.6
Q ss_pred eeEEeeec-ceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEE-Ee
Q 024185 12 QALLFARQ-NIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGI-LR 89 (271)
Q Consensus 12 ~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~-~~ 89 (271)
..+.++.. ++.+..++.. +... . ............+++.+++.. +++...++.|..+|.+ ++.... +.
T Consensus 73 g~l~v~~~~~~~v~~~d~~-g~~~--~-~~~~~~~~~~~~i~~~~~g~l-----~v~~~~~~~i~~~~~~-g~~~~~~~~ 142 (300)
T 2qc5_A 73 GDIWFTENGANKIGKLSKK-GGFT--E-YPLPQPDSGPYGITEGLNGDI-----WFTQLNGDRIGKLTAD-GTIYEYDLP 142 (300)
T ss_dssp SCEEEEETTTTEEEEECTT-SCEE--E-EECSSTTCCEEEEEECSTTCE-----EEEETTTTEEEEECTT-SCEEEEECS
T ss_pred CCEEEEecCCCeEEEECCC-CCeE--E-ecCCCCCCCCccceECCCCCE-----EEEccCCCeEEEECCC-CCEEEccCC
Confidence 34444443 4556666554 3211 1 112223356778999998886 4555557889999887 554322 22
Q ss_pred --cCCcceEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEecCCeEEEEECCC
Q 024185 90 --LRGRPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYG 167 (271)
Q Consensus 90 --~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~~ 167 (271)
......+++.++++..++...++.|..+|. +++. .......+...+..+++.++|+..++....+.|..||. +
T Consensus 143 ~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~---~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~ 217 (300)
T 2qc5_A 143 NKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKL---EEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-T 217 (300)
T ss_dssp STTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCE---EEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-T
T ss_pred CCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcE---EEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-C
Confidence 123456899999996666656789999998 4442 23333344567889999999986666666778999998 5
Q ss_pred CeEEEEeecCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCCceeEE-EecCCcceeEEEEEecCCcEEEEeCCeEEE
Q 024185 168 GEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVA-CWNGNIGVVACLKWAPRRAMFVAASSVLSF 246 (271)
Q Consensus 168 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~-~~~~~~~~v~~~~~s~~~~~l~~~~~~v~i 246 (271)
++.... ........+.+++++++|+..++...++.|..+|. +++... .+......+.+++++++|+++++..+.|..
T Consensus 218 g~~~~~-~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~i~~ 295 (300)
T 2qc5_A 218 GEISEY-DIPTPNARPHAITAGKNSEIWFTEWGANQIGRITN-DNTIQEYQLQTENAEPHGITFGKDGSVWFALKCKIGK 295 (300)
T ss_dssp CCEEEE-ECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECT-TSCEEEEECCSTTCCCCCEEECTTSCEEEECSSEEEE
T ss_pred CcEEEE-ECCCCCCCceEEEECCCCCEEEeccCCCeEEEECC-CCcEEEEECCccCCccceeEeCCCCCEEEEccCceEE
Confidence 554332 22222234788999999997777766789999998 444332 233344568899999999977766445555
Q ss_pred EcC
Q 024185 247 WIP 249 (271)
Q Consensus 247 w~~ 249 (271)
+|+
T Consensus 296 ~~p 298 (300)
T 2qc5_A 296 LNL 298 (300)
T ss_dssp EEE
T ss_pred eCC
Confidence 554
No 216
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.45 E-value=1.6e-11 Score=99.23 Aligned_cols=216 Identities=8% Similarity=0.046 Sum_probs=142.1
Q ss_pred ecceeeEEEEeeccceeeEEEEEcc-------cccceEEeeEEecCCchhhhhhhhhhccC------ceEEEEEecCcce
Q 024185 18 RQNIILILLESLCGIYQCMIIEFFA-------TSKGIRRGLFLSACLQLMIALCLVLLTTA------LEYGIFVLMLASF 84 (271)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~v~~~~~s~~~~~~~~~~l~s~~~d------g~i~iwd~~~~~~ 84 (271)
..+..+..++....-..+...+..+ .....-..+..+|+| . ++++..+ |.+.+.|.++++.
T Consensus 103 l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i-----~Vs~~g~~~g~~~g~v~vlD~~T~~v 176 (462)
T 2ece_A 103 LRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-I-----YISALGNEEGEGPGGILMLDHYSFEP 176 (462)
T ss_dssp TTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-E-----EEEEEEETTSCSCCEEEEECTTTCCE
T ss_pred CCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-E-----EEEcCCCcCCCCCCeEEEEECCCCeE
Confidence 4467888888764434455555553 111234457788998 4 3344444 7899999999999
Q ss_pred eEEEecCC-----cceEEEcCCCCEEEEEe-------------------cCCeEEEEeCCCCCCCcceEEEecCCccceE
Q 024185 85 QGILRLRG-----RPTVAFDQQGLVFAVAM-------------------EAGAIKLFDSRSYDKGPFDTFLVGGDTAEVC 140 (271)
Q Consensus 85 ~~~~~~~~-----~~~~~~~~~~~~l~~~~-------------------~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~ 140 (271)
+.++.... ...+.|+|+++.++++. .+.+|.+||+.+++. .....+........
T Consensus 177 ~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~--~~tI~vg~~g~~P~ 254 (462)
T 2ece_A 177 LGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKR--IHSLTLGEENRMAL 254 (462)
T ss_dssp EEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEE--EEEEESCTTEEEEE
T ss_pred EEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcE--eeEEecCCCCCccc
Confidence 98886432 12388899999888874 368999999998654 34444432223455
Q ss_pred EEEE--cCCCcEEEEEec------CCeEEEEECCCCeE--EEEeecCCC----------------CCceeeEEECCCCCE
Q 024185 141 DIKF--SNDGKSMLLTTT------NNNIYVLDAYGGEK--RCGFSLEPS----------------PNTNTEATFTPDGQY 194 (271)
Q Consensus 141 ~~~~--s~~~~~l~~~~~------d~~i~~~d~~~~~~--~~~~~~~~~----------------~~~v~~~~~~~~~~~ 194 (271)
.+.| +|+++++++++. +++|.+|....++. .+.+..... ......+.+||||++
T Consensus 255 ~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrf 334 (462)
T 2ece_A 255 ELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKF 334 (462)
T ss_dssp EEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCE
T ss_pred eeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCE
Confidence 6666 999999888774 56887776554432 111111100 123667999999999
Q ss_pred EEEecC-CCcEEEEEcCC---ceeEEEecCCc--------------ceeEEEEEecCCcEEEEeC
Q 024185 195 VVSGSG-DGTLHAWNINT---RNEVACWNGNI--------------GVVACLKWAPRRAMFVAAS 241 (271)
Q Consensus 195 l~~~~~-dg~i~iwd~~~---~~~~~~~~~~~--------------~~v~~~~~s~~~~~l~~~~ 241 (271)
|+++.. .+.|.+||+.. .+.+..+.... +.-..++++|||++|+++.
T Consensus 335 LYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 335 LYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp EEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred EEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 988776 68999999863 35555553221 1257899999999888776
No 217
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.45 E-value=1.4e-11 Score=98.67 Aligned_cols=192 Identities=10% Similarity=0.006 Sum_probs=131.8
Q ss_pred eEEecCCchhhhhhhhhhc----cCceEEEEEecCcceeEEEecCCcceEEEcCCCCEEEEEe----------cCCeEEE
Q 024185 51 LFLSACLQLMIALCLVLLT----TALEYGIFVLMLASFQGILRLRGRPTVAFDQQGLVFAVAM----------EAGAIKL 116 (271)
Q Consensus 51 ~~~s~~~~~~~~~~l~s~~----~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----------~d~~i~i 116 (271)
....|+++.+++ +-. .++.|.+.|..+++.+..++....+.++++|||++++++. .++.|.+
T Consensus 38 ~~~~pd~~~vyV----~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P~va~spDG~~lyVan~~~~r~~~G~~~~~Vsv 113 (386)
T 3sjl_D 38 EAPAPDARRVYV----NDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLPNPVVADDGSFIAHASTVFSRIARGERTDYVEV 113 (386)
T ss_dssp CCCCCCTTEEEE----EECGGGCSSEEEEEEETTTTEEEEEEEECSSCEEEECTTSSCEEEEEEEEEETTEEEEEEEEEE
T ss_pred eccCCCCCEEEE----EcCcccCCCCEEEEEECCCCeEEEEEECCCCCcEEECCCCCEEEEEcccccccccCCCCCEEEE
Confidence 445688877433 322 2689999999999999999866555699999999888775 3578999
Q ss_pred EeCCCCCCCcceEEEecC-C----ccceEEEEEcCCCcEEEEEec--CCeEEEEECCCCeEEEEeecCCCCCceeeEEEC
Q 024185 117 FDSRSYDKGPFDTFLVGG-D----TAEVCDIKFSNDGKSMLLTTT--NNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFT 189 (271)
Q Consensus 117 ~d~~~~~~~~~~~~~~~~-~----~~~v~~~~~s~~~~~l~~~~~--d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~ 189 (271)
||..+.+. .....+.. . ......++++|||+++++++. ++.|.++|+.+++.+.++.... + ...+.
T Consensus 114 iD~~t~~v--~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g----~-~~~~P 186 (386)
T 3sjl_D 114 FDPVTLLP--TADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD----C-YHIFP 186 (386)
T ss_dssp ECTTTCCE--EEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS----E-EEEEE
T ss_pred EECCCCeE--EEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC----c-ceeec
Confidence 99998775 33333322 0 124557899999999998874 6899999999999998886432 1 12232
Q ss_pred CCCCEEEEecCCCcEEEEEcCC-ceeEEEecCC----ccee-EEEEEe-cCCcEEEEeC-CeEEEEcCCCCC
Q 024185 190 PDGQYVVSGSGDGTLHAWNINT-RNEVACWNGN----IGVV-ACLKWA-PRRAMFVAAS-SVLSFWIPNPSS 253 (271)
Q Consensus 190 ~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~----~~~v-~~~~~s-~~~~~l~~~~-~~v~iw~~~~~~ 253 (271)
...+.+++.+.||.+.+.++.+ ++.......+ ..++ ...+|. ++|++++.+. |.+.+.|+.+..
T Consensus 187 ~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~ 258 (386)
T 3sjl_D 187 TAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGD 258 (386)
T ss_dssp EETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSS
T ss_pred CCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEEeCCCEEEEEECCCCc
Confidence 3345666777788888888865 5543322111 1222 224664 6887655554 999999997765
No 218
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.44 E-value=6.3e-11 Score=90.14 Aligned_cols=204 Identities=9% Similarity=0.033 Sum_probs=138.5
Q ss_pred EEEEcccccc-eEEeeEEecCCchhhhhhhhhhc--cCceEEEEEecCcceeEEEecCCc-ceEEEcCCCCEEEEE-ecC
Q 024185 37 IIEFFATSKG-IRRGLFLSACLQLMIALCLVLLT--TALEYGIFVLMLASFQGILRLRGR-PTVAFDQQGLVFAVA-MEA 111 (271)
Q Consensus 37 ~~~~~~~~~~-~v~~~~~s~~~~~~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~-~~d 111 (271)
.++.+..... ....+.+++++.. +++.+ .++.|+++|+.+++.+..+..... ....+..+++.|+.+ -.+
T Consensus 11 vv~~~p~~~~~f~~Gl~~~~dg~L-----yvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~ 85 (266)
T 2iwa_A 11 VLNEFPHDPYAFTQGLVYAENDTL-----FESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLK 85 (266)
T ss_dssp EEEEEECCTTCCEEEEEECSTTEE-----EEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTC
T ss_pred EEEEEECCCCCCcccEEEeCCCeE-----EEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecC
Confidence 3444543332 3578999998754 33443 368999999999999988864432 222233345556555 457
Q ss_pred CeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEecCCeEEEEECCCCeEEEEeecCCCC---CceeeEEE
Q 024185 112 GAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSP---NTNTEATF 188 (271)
Q Consensus 112 ~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~---~~v~~~~~ 188 (271)
+.+.++|..+.+. ...+... ... ...+++||+.++++..++.|.++|..+.+.+..+...... .....+.|
T Consensus 86 ~~v~viD~~t~~v--~~~i~~g-~~~---g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~ 159 (266)
T 2iwa_A 86 NIGFIYDRRTLSN--IKNFTHQ-MKD---GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEY 159 (266)
T ss_dssp SEEEEEETTTTEE--EEEEECC-SSS---CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEE
T ss_pred CEEEEEECCCCcE--EEEEECC-CCC---eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEE
Confidence 8999999998775 3333332 111 2346678888888878899999999999888887644321 12566788
Q ss_pred CCCCCEEEEecCCCcEEEEEcCCceeEEEecCCc-------------ceeEEEEEecCCcEEEEeC---CeEEEEcCCCC
Q 024185 189 TPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNI-------------GVVACLKWAPRRAMFVAAS---SVLSFWIPNPS 252 (271)
Q Consensus 189 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-------------~~v~~~~~s~~~~~l~~~~---~~v~iw~~~~~ 252 (271)
. +|+..+....++.|.+.|..+++.+..+.... ...+.++|+|+++.++.++ +++.+.++...
T Consensus 160 ~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 160 I-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp E-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred E-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 7 77655555567899999999999998885321 2458999999987555544 67877777654
No 219
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.43 E-value=1.9e-11 Score=95.98 Aligned_cols=196 Identities=11% Similarity=0.030 Sum_probs=128.9
Q ss_pred cccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEec--CCcceEEEcCCCCEEEEEecCCeEEEEeCC
Q 024185 43 TSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILRL--RGRPTVAFDQQGLVFAVAMEAGAIKLFDSR 120 (271)
Q Consensus 43 ~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~ 120 (271)
..........|+|+++.+ +++...++.|..|+. +++. ..+.. .....++++++|+++++...++.|..|+..
T Consensus 42 ~~~~~~egp~~~~~g~~l----~~~d~~~~~i~~~~~-~g~~-~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~ 115 (305)
T 3dr2_A 42 DQATWSEGPAWWEAQRTL----VWSDLVGRRVLGWRE-DGTV-DVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD 115 (305)
T ss_dssp CCCSSEEEEEEEGGGTEE----EEEETTTTEEEEEET-TSCE-EEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred cCCcCccCCeEeCCCCEE----EEEECCCCEEEEEeC-CCCE-EEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC
Confidence 344455678999999843 457778899999988 4542 33333 335669999999966665556789999986
Q ss_pred CCCCCcceEEE--ecCC-ccceEEEEEcCCCcEEEE----Eec-------------CCeEEEEECCCCeEEEEeecCCCC
Q 024185 121 SYDKGPFDTFL--VGGD-TAEVCDIKFSNDGKSMLL----TTT-------------NNNIYVLDAYGGEKRCGFSLEPSP 180 (271)
Q Consensus 121 ~~~~~~~~~~~--~~~~-~~~v~~~~~s~~~~~l~~----~~~-------------d~~i~~~d~~~~~~~~~~~~~~~~ 180 (271)
++. .... ..+. ...+.+++++|+|+..++ |.. .+.|..+|..+++..... ..
T Consensus 116 -g~~---~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~-- 187 (305)
T 3dr2_A 116 -GQA---HLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DL-- 187 (305)
T ss_dssp -SCE---EEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EE--
T ss_pred -CCE---EEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cC--
Confidence 442 1111 1111 134678999999997775 321 256888887666654333 21
Q ss_pred CceeeEEECCCCCEEEEecCC------CcEEEEEcCCceeE--EEe-cCCcceeEEEEEecCCcEEEEeCCeEEEEcCCC
Q 024185 181 NTNTEATFTPDGQYVVSGSGD------GTLHAWNINTRNEV--ACW-NGNIGVVACLKWAPRRAMFVAASSVLSFWIPNP 251 (271)
Q Consensus 181 ~~v~~~~~~~~~~~l~~~~~d------g~i~iwd~~~~~~~--~~~-~~~~~~v~~~~~s~~~~~l~~~~~~v~iw~~~~ 251 (271)
.....++|+||++.|+.+... +.|.+|++..+... ..+ ....+....++++++|++.++..+.|.+|+.+.
T Consensus 188 ~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~~~gv~~~~~~g 267 (305)
T 3dr2_A 188 DHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSSGTGVCVFDSDG 267 (305)
T ss_dssp SSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECCSSEEEEECTTS
T ss_pred CCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEecCCcEEEECCCC
Confidence 226679999999988776654 68999998765411 111 112334567899999996666556799999854
Q ss_pred C
Q 024185 252 S 252 (271)
Q Consensus 252 ~ 252 (271)
.
T Consensus 268 ~ 268 (305)
T 3dr2_A 268 Q 268 (305)
T ss_dssp C
T ss_pred C
Confidence 3
No 220
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.43 E-value=8.7e-12 Score=99.90 Aligned_cols=221 Identities=7% Similarity=-0.093 Sum_probs=139.8
Q ss_pred eeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhh---------ccCceEEEEEecCcceeEEEecC-
Q 024185 22 ILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLL---------TTALEYGIFVLMLASFQGILRLR- 91 (271)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~---------~~dg~i~iwd~~~~~~~~~~~~~- 91 (271)
.+..++..++ ..+..+...... .+.++|+++.+++ +. ..++.|.+||..+++.+.++..+
T Consensus 47 ~vsvID~~t~----~v~~~i~vG~~P--~i~~spDg~~lyV----an~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~ 116 (368)
T 1mda_H 47 ENWVSCAGCG----VTLGHSLGAFLS--LAVAGHSGSDFAL----ASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPD 116 (368)
T ss_dssp EEEEEETTTT----EEEEEEEECTTC--EEEECTTSSCEEE----EEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETT
T ss_pred eEEEEECCCC----eEEEEEeCCCCC--ceEECCCCCEEEE----EcccccccccCCCCCEEEEEECCCCCEEEEEECCC
Confidence 6667776666 333334443444 6999999998433 22 25789999999999999998654
Q ss_pred --------CcceEEEcCCCCEEEEEec--CCeEEE--EeCCCCCCCcceEEEecC----------------CccceEEEE
Q 024185 92 --------GRPTVAFDQQGLVFAVAME--AGAIKL--FDSRSYDKGPFDTFLVGG----------------DTAEVCDIK 143 (271)
Q Consensus 92 --------~~~~~~~~~~~~~l~~~~~--d~~i~i--~d~~~~~~~~~~~~~~~~----------------~~~~v~~~~ 143 (271)
....++++|||++++++.. +..+.+ +|..+ . ......+ ..+.+..+.
T Consensus 117 ~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t--v---~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd 191 (368)
T 1mda_H 117 APRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD--D---QLTKSASCFHIHPGAAATHYLGSCPASLAASD 191 (368)
T ss_dssp SCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE--E---EEEECSSCCCCEEEETTEEECCCCTTSCEEEE
T ss_pred ccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh--c---eEEECCCceEEccCCCeEEEEEcCCCCEEEEE
Confidence 3455999999999999864 457888 88855 1 0111100 000000000
Q ss_pred --------------------------EcCCCcEEEEEecCCeEEEEECCCCe--EEEEeecCC--------CCCceeeEE
Q 024185 144 --------------------------FSNDGKSMLLTTTNNNIYVLDAYGGE--KRCGFSLEP--------SPNTNTEAT 187 (271)
Q Consensus 144 --------------------------~s~~~~~l~~~~~d~~i~~~d~~~~~--~~~~~~~~~--------~~~~v~~~~ 187 (271)
.++++..++..+. +.+.+.|+.+.+ .+..+.... .+.....+.
T Consensus 192 ~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~ 270 (368)
T 1mda_H 192 LAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVA 270 (368)
T ss_dssp CCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEE
T ss_pred CccccccCCeEEEEeeeeeeCCCCccccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeE
Confidence 1333444444444 677777775432 222222110 001122278
Q ss_pred ECCCCCEEEEecC---------CCcEEEEEcCCceeEEEecCCcceeEEEEEecCCc-EEEEeC---CeEEEEcCCCCCC
Q 024185 188 FTPDGQYVVSGSG---------DGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRA-MFVAAS---SVLSFWIPNPSSN 254 (271)
Q Consensus 188 ~~~~~~~l~~~~~---------dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~---~~v~iw~~~~~~~ 254 (271)
++||++.++.+.. ++.+.++|+.+++.+..+.... ...+++|+|||+ ++++.. ++|.++|+.+++.
T Consensus 271 ~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kv 349 (368)
T 1mda_H 271 KLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQD 349 (368)
T ss_dssp EETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEESSSCEE
T ss_pred EcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEECCCCcE
Confidence 9999998886543 2356699999999999886543 578999999997 344432 7899999999988
Q ss_pred CcCCC
Q 024185 255 STDES 259 (271)
Q Consensus 255 ~~~~~ 259 (271)
.....
T Consensus 350 v~~I~ 354 (368)
T 1mda_H 350 QSSVE 354 (368)
T ss_dssp EEECC
T ss_pred EEEEE
Confidence 77665
No 221
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.42 E-value=7.7e-14 Score=112.62 Aligned_cols=217 Identities=11% Similarity=-0.042 Sum_probs=118.8
Q ss_pred eeEEeeecceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEecC
Q 024185 12 QALLFARQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILRLR 91 (271)
Q Consensus 12 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 91 (271)
+.++++..++.+..++..+|... ..+.. +.+.+..+.+++.. +++++.||.++.||.++++.+..++.+
T Consensus 10 ~~v~~gs~dg~v~a~d~~tG~~~----W~~~~--~~~~s~p~~~~g~~-----~v~~s~dg~l~a~d~~tG~~~w~~~~~ 78 (369)
T 2hz6_A 10 TLLFVSTLDGSLHAVSKRTGSIK----WTLKE--DPVLQVPTHVEEPA-----FLPDPNDGSLYTLGSKNNEGLTKLPFT 78 (369)
T ss_dssp TEEEEEETTSEEEEEETTTCCEE----EEEEC--CCSCCCC-----CC-----EEECTTTCCEEEC-----CCSEECSCC
T ss_pred CEEEEEcCCCEEEEEECCCCCEE----EEecC--CCceecceEcCCCE-----EEEeCCCCEEEEEECCCCceeeeeecc
Confidence 45667777899999998877332 22333 33444445556655 556789999999999999876666443
Q ss_pred C---cc-eEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEecCCeEEEEECCC
Q 024185 92 G---RP-TVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYG 167 (271)
Q Consensus 92 ~---~~-~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~~ 167 (271)
. .. ...+. ++..+++++.++.++.||.++++. ...+..+. ...++|++..+++++.|+.|+.||.++
T Consensus 79 ~~~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~----~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~t 149 (369)
T 2hz6_A 79 IPELVQASPCRS-SDGILYMGKKQDIWYVIDLLTGEK----QQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKT 149 (369)
T ss_dssp HHHHHTTCSCC------CCCCEEEEEEEEECCC------------------------------EEEEEEEEEEECCCSSS
T ss_pred CccccccCceEe-cCCEEEEEeCCCEEEEEECCCCcE----EEEecCCC----cccccccCCEEEEEecCCEEEEEECCC
Confidence 1 11 11111 345678888899999999999886 44433332 235667888899999999999999999
Q ss_pred CeEEEEeecCCCCCceeeEEECCCC---CEEEEecCCCcEEEEEcCCceeEEEecCCcceeEEEEEecCCcEE----EEe
Q 024185 168 GEKRCGFSLEPSPNTNTEATFTPDG---QYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMF----VAA 240 (271)
Q Consensus 168 ~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l----~~~ 240 (271)
++.+..+.... .....++++. ..+++++.+|.++.||.++++.+.........+....++++|... +.+
T Consensus 150 G~~~W~~~~~~----~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~pv~~~~~~~~dg~~~v~~~~~~ 225 (369)
T 2hz6_A 150 RELRWNATYFD----YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNYASPVVAFYVWQREGLRKVMHINVA 225 (369)
T ss_dssp SSCCCEEEEEE----ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEECSSCEEEEEECTTSSCEEECCEEEE
T ss_pred CCEEEeEeccc----ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecCCCceEEEEEecCCceEeccceeec
Confidence 98776654322 1223344432 457778889999999999999988776433333344556676532 223
Q ss_pred CCeEEEEcCCCC
Q 024185 241 SSVLSFWIPNPS 252 (271)
Q Consensus 241 ~~~v~iw~~~~~ 252 (271)
++.++.+|..++
T Consensus 226 ~~~l~~ld~~tG 237 (369)
T 2hz6_A 226 VETLRYLTFMSG 237 (369)
T ss_dssp HHHHHHHHHHHH
T ss_pred ccceeeeehhcC
Confidence 344555554443
No 222
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.42 E-value=1.7e-14 Score=116.42 Aligned_cols=178 Identities=14% Similarity=0.039 Sum_probs=100.7
Q ss_pred hhhhccCceEEEEEecCcceeEEEecCCcceEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcceEEEecCCcc-ceE-EE
Q 024185 65 LVLLTTALEYGIFVLMLASFQGILRLRGRPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTA-EVC-DI 142 (271)
Q Consensus 65 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~-~v~-~~ 142 (271)
+++++.||.++.||.++|+.+..+....+.+..+..++..+++++.||.|+.||.++++. ......+.. .+. ..
T Consensus 12 v~~gs~dg~v~a~d~~tG~~~W~~~~~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~----~w~~~~~~~~~~~~sp 87 (369)
T 2hz6_A 12 LFVSTLDGSLHAVSKRTGSIKWTLKEDPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEG----LTKLPFTIPELVQASP 87 (369)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEECCCSCCCC-----CCEEECTTTCCEEEC-----CC----SEECSCCHHHHHTTCS
T ss_pred EEEEcCCCEEEEEECCCCCEEEEecCCCceecceEcCCCEEEEeCCCCEEEEEECCCCce----eeeeeccCccccccCc
Confidence 567889999999999999998888774444444556777777778899999999988875 333322211 111 11
Q ss_pred EEcCCCcEEEEEecCCeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCCceeEEEecCCc
Q 024185 143 KFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNI 222 (271)
Q Consensus 143 ~~s~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 222 (271)
.+. ++..+++++.++.++.||.++|+.+..+..+.. ..++|++..+++++.++.|+.||.++++.+..+..+.
T Consensus 88 ~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~------~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~ 160 (369)
T 2hz6_A 88 CRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFA------DSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFD 160 (369)
T ss_dssp CC------CCCCEEEEEEEEECCC----------------------------EEEEEEEEEEECCCSSSSSCCCEEEEEE
T ss_pred eEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCCc------ccccccCCEEEEEecCCEEEEEECCCCCEEEeEeccc
Confidence 111 345678888899999999999998877764431 3456788899999999999999999998876654221
Q ss_pred ceeEEEEEecC----CcEEEEeC-CeEEEEcCCCCCCC
Q 024185 223 GVVACLKWAPR----RAMFVAAS-SVLSFWIPNPSSNS 255 (271)
Q Consensus 223 ~~v~~~~~s~~----~~~l~~~~-~~v~iw~~~~~~~~ 255 (271)
.....++++ +.+++.+. |.+..||.++++.+
T Consensus 161 --~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~ 196 (369)
T 2hz6_A 161 --YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVL 196 (369)
T ss_dssp --ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEE
T ss_pred --ccCccccCCccccceEEEECCCCEEEEEECCCCcEE
Confidence 233344443 44444443 88999999988764
No 223
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.38 E-value=1.1e-10 Score=101.33 Aligned_cols=236 Identities=12% Similarity=0.021 Sum_probs=154.0
Q ss_pred eeEEeeecceeeEEEEeeccceeeEEEEEcccc-c----ceEEeeEEecCCchhhhhhhhhhc-----cCceEEEEEecC
Q 024185 12 QALLFARQNIILILLESLCGIYQCMIIEFFATS-K----GIRRGLFLSACLQLMIALCLVLLT-----TALEYGIFVLML 81 (271)
Q Consensus 12 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~v~~~~~s~~~~~~~~~~l~s~~-----~dg~i~iwd~~~ 81 (271)
..++++..++.+..++..+|... ..+... . ..+...-...++.. ++..+ .++.|+.+|.++
T Consensus 129 ~~v~v~~~dg~l~alD~~tG~~~----W~~~~~~~~~~~~~~~~~p~v~~~~v-----~v~~~~~~~~~~g~v~a~D~~t 199 (677)
T 1kb0_A 129 GKVYVGAWDGRLIALDAATGKEV----WHQNTFEGQKGSLTITGAPRVFKGKV-----IIGNGGAEYGVRGYITAYDAET 199 (677)
T ss_dssp TEEEEECTTSEEEEEETTTCCEE----EEEETTTTCCSSCBCCSCCEEETTEE-----EECCBCTTTCCBCEEEEEETTT
T ss_pred CEEEEEcCCCEEEEEECCCCCEE----eeecCCcCcCcCcccccCcEEECCEE-----EEEecccccCCCCEEEEEECCC
Confidence 45666677888999988877322 223222 1 11111111123333 22222 379999999999
Q ss_pred cceeEEEecCCc----------------------------------ceEEEcCCCCEEEEEecCC---------------
Q 024185 82 ASFQGILRLRGR----------------------------------PTVAFDQQGLVFAVAMEAG--------------- 112 (271)
Q Consensus 82 ~~~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~~d~--------------- 112 (271)
|+.+..+..... ..++++|++..++.+..++
T Consensus 200 G~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~ 279 (677)
T 1kb0_A 200 GERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDN 279 (677)
T ss_dssp CCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCC
T ss_pred CcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCC
Confidence 998877753210 1378899999898887654
Q ss_pred ----eEEEEeCCCCCCCcceEEEecCCc-------cceEEEEEcCCC---cEEEEEecCCeEEEEECCCCeEEEEeecCC
Q 024185 113 ----AIKLFDSRSYDKGPFDTFLVGGDT-------AEVCDIKFSNDG---KSMLLTTTNNNIYVLDAYGGEKRCGFSLEP 178 (271)
Q Consensus 113 ----~i~i~d~~~~~~~~~~~~~~~~~~-------~~v~~~~~s~~~---~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~ 178 (271)
.|..+|.++++. .-.+....|. ....-+....+| +.++.++.+|.++++|.++|+.+..+....
T Consensus 280 ~~~~sv~AlD~~TG~~--~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~ 357 (677)
T 1kb0_A 280 LYLASIVALDPDTGKY--KWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVP 357 (677)
T ss_dssp TTTTEEEEECTTTCCE--EEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSC
T ss_pred eeeEEEEEEECCCCCE--EEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccc
Confidence 599999999886 2122222231 122223344477 678899999999999999999887665321
Q ss_pred CC---------Cc------------------------eeeEEECCCCCEEEEecC-------------------------
Q 024185 179 SP---------NT------------------------NTEATFTPDGQYVVSGSG------------------------- 200 (271)
Q Consensus 179 ~~---------~~------------------------v~~~~~~~~~~~l~~~~~------------------------- 200 (271)
.+ .. -..++++|++.++++...
T Consensus 358 ~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 437 (677)
T 1kb0_A 358 VNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSG 437 (677)
T ss_dssp CSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGG
T ss_pred cCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccc
Confidence 10 00 014688999888876532
Q ss_pred ------------------CCcEEEEEcCCceeEEEecCCcceeEEEEEecCCcEEEEeC--CeEEEEcCCCCCCCcCCC
Q 024185 201 ------------------DGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNPSSNSTDES 259 (271)
Q Consensus 201 ------------------dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~~v~iw~~~~~~~~~~~~ 259 (271)
.|.|..||+.+++.+..++ +..++.+..++.++.+++.++ +.+++||.++++.+....
T Consensus 438 ~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~-~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~ 515 (677)
T 1kb0_A 438 TGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVE-HVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAP 515 (677)
T ss_dssp GTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEE-ESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred cccccccccccccCCCCCccEEEEEeCCCCcEEeecC-CCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeee
Confidence 2789999999999988876 333445556677777777776 899999999999876554
No 224
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.37 E-value=1.5e-10 Score=92.46 Aligned_cols=187 Identities=9% Similarity=0.038 Sum_probs=124.0
Q ss_pred ccceEEeeEEecCCchhhhhhhhhhcc-----CceEEEEEecCcceeEEEecC--------CcceEEEcCCCCEEEEE-e
Q 024185 44 SKGIRRGLFLSACLQLMIALCLVLLTT-----ALEYGIFVLMLASFQGILRLR--------GRPTVAFDQQGLVFAVA-M 109 (271)
Q Consensus 44 ~~~~v~~~~~s~~~~~~~~~~l~s~~~-----dg~i~iwd~~~~~~~~~~~~~--------~~~~~~~~~~~~~l~~~-~ 109 (271)
+-..+..++++++++. +++-.. ++.|.+||+++++.+..+..+ ....+++++++..++.+ .
T Consensus 65 ~~~~p~gv~~d~~g~L-----~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~ 139 (343)
T 2qe8_A 65 TFDTVLGIKSDGNGIV-----WMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDP 139 (343)
T ss_dssp CCSCEEEEEECSSSEE-----EEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEEC
T ss_pred ceeEeeEEEEcCCCcE-----EEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcC
Confidence 3457888999999886 222222 578999999999877777542 12558999876555544 3
Q ss_pred ---cCCeEEEEeCCCCCCCcceEEEecCC-----------------------------ccceEEEEEcCCCcEEEEEecC
Q 024185 110 ---EAGAIKLFDSRSYDKGPFDTFLVGGD-----------------------------TAEVCDIKFSNDGKSMLLTTTN 157 (271)
Q Consensus 110 ---~d~~i~i~d~~~~~~~~~~~~~~~~~-----------------------------~~~v~~~~~s~~~~~l~~~~~d 157 (271)
.++.|.+||..+++. ...+.+| ...+..++|+|||+.|+++..+
T Consensus 140 ~~~~~~~i~v~d~~~g~~----~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~ 215 (343)
T 2qe8_A 140 APDDKAALIRVDLQTGLA----ARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMH 215 (343)
T ss_dssp CSGGGCEEEEEETTTCCE----EEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESS
T ss_pred ccCCCCeEEEEECCCCCE----EEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCC
Confidence 578999999986653 1212111 0235789999999988888765
Q ss_pred C-eEEEEECC---CCe-----EEE--EeecCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCCceeEEEecC-Cccee
Q 024185 158 N-NIYVLDAY---GGE-----KRC--GFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNG-NIGVV 225 (271)
Q Consensus 158 ~-~i~~~d~~---~~~-----~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-~~~~v 225 (271)
+ .+..++.. .+. ... ...++.. ....++++++|+++++...++.|.+||..+++....... +...+
T Consensus 216 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g--~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p 293 (343)
T 2qe8_A 216 STSMYRIKSADLSNLQLTDAELGSKIERYSEKP--ICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWT 293 (343)
T ss_dssp CSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECC--SCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCE
T ss_pred CCeEEEEEHHHhcCCCCChhhhhcceEecccCC--CCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecC
Confidence 5 55555532 111 000 0111111 245699999999999988899999999856664333322 24467
Q ss_pred EEEEEecCCcEEEEeC
Q 024185 226 ACLKWAPRRAMFVAAS 241 (271)
Q Consensus 226 ~~~~~s~~~~~l~~~~ 241 (271)
.+++|.++++++++.+
T Consensus 294 ~~va~~~~g~l~v~~~ 309 (343)
T 2qe8_A 294 DSFNFGSDGYLYFDCN 309 (343)
T ss_dssp EEEEECTTSCEEEEEC
T ss_pred CeeEECCCCcEEEEeC
Confidence 8999999998888776
No 225
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.37 E-value=4.6e-10 Score=84.49 Aligned_cols=192 Identities=10% Similarity=0.079 Sum_probs=132.5
Q ss_pred EEEEEcccccce-EEeeEEecCCchhhhhhhhhhccCc--eEEEEEecCcceeEEEecCCcc-eEEEcCCCCEEEEE-ec
Q 024185 36 MIIEFFATSKGI-RRGLFLSACLQLMIALCLVLLTTAL--EYGIFVLMLASFQGILRLRGRP-TVAFDQQGLVFAVA-ME 110 (271)
Q Consensus 36 ~~~~~~~~~~~~-v~~~~~s~~~~~~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~-~~ 110 (271)
..++.+.+...+ ...+.++ ++.. +.+.+.+| .|+.+|+++++.++.+...... ...+.++++.|+.. -.
T Consensus 32 ~vv~~~phd~~~ftqGL~~~-~~~L-----yestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~ 105 (262)
T 3nol_A 32 QIVHSYPHDTKAFTEGFFYR-NGYF-----YESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWK 105 (262)
T ss_dssp EEEEEEECCTTCEEEEEEEE-TTEE-----EEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESS
T ss_pred EEEEEecCCCCcccceEEEE-CCEE-----EEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEee
Confidence 445556443333 4678888 5654 55667665 8999999999999888765432 23344456566655 45
Q ss_pred CCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEecCCeEEEEECCCCeEEEEeecCCCC---CceeeEE
Q 024185 111 AGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSP---NTNTEAT 187 (271)
Q Consensus 111 d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~---~~v~~~~ 187 (271)
++.+.+||.++.+. ...+...+ ....+++|++.|+.+..++.|.++|..+.+.+.++...... ..++.+.
T Consensus 106 ~~~v~v~D~~t~~~--~~ti~~~~-----eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe 178 (262)
T 3nol_A 106 NGLGFVWNIRNLRQ--VRSFNYDG-----EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELE 178 (262)
T ss_dssp SSEEEEEETTTCCE--EEEEECSS-----CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEE
T ss_pred CCEEEEEECccCcE--EEEEECCC-----CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeE
Confidence 78999999999876 44444433 22334467787877777889999999999988887654321 2245577
Q ss_pred ECCCCCEEEEecCCCcEEEEEcCCceeEEEecCC------------cceeEEEEEecCCcEEEEeC
Q 024185 188 FTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGN------------IGVVACLKWAPRRAMFVAAS 241 (271)
Q Consensus 188 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~------------~~~v~~~~~s~~~~~l~~~~ 241 (271)
|. +|+..+..-.++.|.+.|.++++.+..+... ....+.++|+|+++.|...+
T Consensus 179 ~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 179 WV-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp EE-TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred EE-CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence 76 7776666666889999999999998887432 12458999999877666665
No 226
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.32 E-value=6.4e-10 Score=96.77 Aligned_cols=234 Identities=11% Similarity=0.069 Sum_probs=150.3
Q ss_pred eeEEeeecceeeEEEEeeccceeeEEEEEcccc--cceEEeeEEec---CCchhhhhhhhhhc-----cCceEEEEEecC
Q 024185 12 QALLFARQNIILILLESLCGIYQCMIIEFFATS--KGIRRGLFLSA---CLQLMIALCLVLLT-----TALEYGIFVLML 81 (271)
Q Consensus 12 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~s~---~~~~~~~~~l~s~~-----~dg~i~iwd~~~ 81 (271)
..++++..++.+..++..+|...-. +... ......+..+| ++.. ++..+ .+|.|+.||.++
T Consensus 122 g~v~v~~~dg~l~AlDa~TG~~~W~----~~~~~~~~~~~~~~~sP~v~~g~v-----~vg~~~~~~~~~g~v~a~D~~t 192 (689)
T 1yiq_A 122 GKVYVGVLDGRLEAIDAKTGQRAWS----VDTRADHKRSYTITGAPRVVNGKV-----VIGNGGAEFGVRGYVTAYDAET 192 (689)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEE----EECCSCTTSCCBCCSCCEEETTEE-----EECCBCTTTCCBCEEEEEETTT
T ss_pred CEEEEEccCCEEEEEECCCCCEeee----ecCcCCCCCCccccCCcEEECCEE-----EEEeCCCccCCCCEEEEEECCC
Confidence 4566667788899999887743222 2211 11001111112 4443 22221 479999999999
Q ss_pred cceeEEEecC--------------------------------Cc-ceEEEcCCCCEEEEEecCCe---------------
Q 024185 82 ASFQGILRLR--------------------------------GR-PTVAFDQQGLVFAVAMEAGA--------------- 113 (271)
Q Consensus 82 ~~~~~~~~~~--------------------------------~~-~~~~~~~~~~~l~~~~~d~~--------------- 113 (271)
|+.+..+... .. ..++++|+...++.+..++.
T Consensus 193 G~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~ 272 (689)
T 1yiq_A 193 GKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNL 272 (689)
T ss_dssp CCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCT
T ss_pred CcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCce
Confidence 9988776521 01 13788998899999887763
Q ss_pred ----EEEEeCCCCCCCcceEEEecC--Cc-------cceEEEEEcCCCc---EEEEEecCCeEEEEECCCCeEEEEeecC
Q 024185 114 ----IKLFDSRSYDKGPFDTFLVGG--DT-------AEVCDIKFSNDGK---SMLLTTTNNNIYVLDAYGGEKRCGFSLE 177 (271)
Q Consensus 114 ----i~i~d~~~~~~~~~~~~~~~~--~~-------~~v~~~~~s~~~~---~l~~~~~d~~i~~~d~~~~~~~~~~~~~ 177 (271)
|..+|.++++. ...+.. |. .+........+|+ .++.++.+|.++++|.++|+.+......
T Consensus 273 y~~~v~AlD~~TG~~----~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~ 348 (689)
T 1yiq_A 273 FLSSIVAVNADTGEY----VWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIV 348 (689)
T ss_dssp TTTEEEEEETTTCCE----EEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESS
T ss_pred eeeeEEEEEccCCce----eEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEecccccc
Confidence 99999999986 443322 21 1122222233565 7888999999999999999987543221
Q ss_pred CC-------------------------------------CCceeeEEECCCCCEEEEecC--------------------
Q 024185 178 PS-------------------------------------PNTNTEATFTPDGQYVVSGSG-------------------- 200 (271)
Q Consensus 178 ~~-------------------------------------~~~v~~~~~~~~~~~l~~~~~-------------------- 200 (271)
.. ...-..++++|+..++++...
T Consensus 349 ~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~ 428 (689)
T 1yiq_A 349 PQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKS 428 (689)
T ss_dssp CCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTT
T ss_pred ccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeecccccccccccc
Confidence 10 000123688898887776421
Q ss_pred -------------------------CCcEEEEEcCCceeEEEecCCcceeEEEEEecCCcEEEEeC--CeEEEEcCCCCC
Q 024185 201 -------------------------DGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNPSS 253 (271)
Q Consensus 201 -------------------------dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~~v~iw~~~~~~ 253 (271)
+|.|..||+.+++.+..++.+. +...-.++..+.+++.++ +.++.||.++++
T Consensus 429 ~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~ 507 (689)
T 1yiq_A 429 MYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVT-IFNGGTLSTAGNLVFEGSADGRVIAYAADTGE 507 (689)
T ss_dssp SCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred ccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCC-CccCccceECCCEEEEECCCCcEEEEECCCCc
Confidence 3779999999999988876543 233345666777888877 889999999998
Q ss_pred CCcCCC
Q 024185 254 NSTDES 259 (271)
Q Consensus 254 ~~~~~~ 259 (271)
.+-..+
T Consensus 508 ~lw~~~ 513 (689)
T 1yiq_A 508 KLWEQP 513 (689)
T ss_dssp EEEEEE
T ss_pred cceeee
Confidence 875443
No 227
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.32 E-value=6.4e-10 Score=90.01 Aligned_cols=189 Identities=10% Similarity=0.085 Sum_probs=128.9
Q ss_pred cCCchhhhhhhhhhccCceEEEEEecCc----ceeEEEecC------C---cceEEEcCCCCEEEEEecC------CeEE
Q 024185 55 ACLQLMIALCLVLLTTALEYGIFVLMLA----SFQGILRLR------G---RPTVAFDQQGLVFAVAMEA------GAIK 115 (271)
Q Consensus 55 ~~~~~~~~~~l~s~~~dg~i~iwd~~~~----~~~~~~~~~------~---~~~~~~~~~~~~l~~~~~d------~~i~ 115 (271)
++++++ ++++..+++|+++|+.+. +..++++.. + ...+...|+| .++++..+ |.+.
T Consensus 93 ~~r~~l----~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~ 167 (462)
T 2ece_A 93 IERRFL----IVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGIL 167 (462)
T ss_dssp CCSCEE----EEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEE
T ss_pred ccCCEE----EEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEE
Confidence 677775 458888999999999755 556666311 1 1226788999 66665444 7899
Q ss_pred EEeCCCCCCCcceEEEecCCc-cceEEEEEcCCCcEEEEEe-------------------cCCeEEEEECCCCeEEEEee
Q 024185 116 LFDSRSYDKGPFDTFLVGGDT-AEVCDIKFSNDGKSMLLTT-------------------TNNNIYVLDAYGGEKRCGFS 175 (271)
Q Consensus 116 i~d~~~~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~~-------------------~d~~i~~~d~~~~~~~~~~~ 175 (271)
++|.++.+. .......... .--..+-|+|+++.+++.. ...+|.+||+.+++.+.++.
T Consensus 168 vlD~~T~~v--~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~ 245 (462)
T 2ece_A 168 MLDHYSFEP--LGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLT 245 (462)
T ss_dssp EECTTTCCE--EEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEE
T ss_pred EEECCCCeE--EEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEe
Confidence 999998885 2222222222 2234688999999888874 36899999999998888877
Q ss_pred cCCCCCceeeEEE--CCCCCEEEEecC------CCcEEEEEcCCcee--EEE--ecCC----------------cceeEE
Q 024185 176 LEPSPNTNTEATF--TPDGQYVVSGSG------DGTLHAWNINTRNE--VAC--WNGN----------------IGVVAC 227 (271)
Q Consensus 176 ~~~~~~~v~~~~~--~~~~~~l~~~~~------dg~i~iwd~~~~~~--~~~--~~~~----------------~~~v~~ 227 (271)
..........+.| +|++++++++++ +++|.+|....++. .+. +... ......
T Consensus 246 vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~ 325 (462)
T 2ece_A 246 LGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTD 325 (462)
T ss_dssp SCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCC
T ss_pred cCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeE
Confidence 6422222444555 999999888774 56787776654432 111 1110 134678
Q ss_pred EEEecCCcEEEEeC---CeEEEEcCC
Q 024185 228 LKWAPRRAMFVAAS---SVLSFWIPN 250 (271)
Q Consensus 228 ~~~s~~~~~l~~~~---~~v~iw~~~ 250 (271)
+.+||||++|.++. +.|.+||+.
T Consensus 326 I~lS~DGrfLYVSnrg~d~VavfdV~ 351 (462)
T 2ece_A 326 IDISLDDKFLYLSLWGIGEVRQYDIS 351 (462)
T ss_dssp EEECTTSCEEEEEETTTTEEEEEECS
T ss_pred EEECCCCCEEEEEeCCCCEEEEEEec
Confidence 99999999998886 789999985
No 228
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.30 E-value=3.4e-10 Score=94.67 Aligned_cols=179 Identities=12% Similarity=0.002 Sum_probs=124.2
Q ss_pred ccCceEEEEEecCcceeEEEecCC-cceEEEcCCCCEEEEEecCC-----------------------------------
Q 024185 69 TTALEYGIFVLMLASFQGILRLRG-RPTVAFDQQGLVFAVAMEAG----------------------------------- 112 (271)
Q Consensus 69 ~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~d~----------------------------------- 112 (271)
..++.+.+.|.++.+...++...+ ..-++++|+|+++++.+.+.
T Consensus 172 ~~~~~vtvID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~ 251 (595)
T 1fwx_A 172 NYVNVFTAVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQ 251 (595)
T ss_dssp GEEEEEEEEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSE
T ss_pred ccCceEEEEECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCee
Confidence 457789999999999888887543 33499999999999887543
Q ss_pred ---eEEEEeCCC--CCCCcceEEEecCCccceEEEEEcCCCcEEEEEec-CCeEEEEECCCCe------------EEEEe
Q 024185 113 ---AIKLFDSRS--YDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTT-NNNIYVLDAYGGE------------KRCGF 174 (271)
Q Consensus 113 ---~i~i~d~~~--~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-d~~i~~~d~~~~~------------~~~~~ 174 (271)
.|.+.|..+ ++. ....... .....++.++|||+++++++. +.+|.++|+.+.+ .....
T Consensus 252 ~i~~V~VID~~~~~~~~-~~~~Ipv---g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v 327 (595)
T 1fwx_A 252 ELNGVKVVDGRKEASSL-FTRYIPI---ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEP 327 (595)
T ss_dssp EETTEEEEECSGGGCCS-SEEEEEE---ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECC
T ss_pred EECcEEEEeCcccCCce-eEEEEec---CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEc
Confidence 366677765 221 0112221 235678899999999887765 7899999998653 23333
Q ss_pred ecCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCC----------ceeEEEecCCccee-----EEEEEecCCcEEEE
Q 024185 175 SLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINT----------RNEVACWNGNIGVV-----ACLKWAPRRAMFVA 239 (271)
Q Consensus 175 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~----------~~~~~~~~~~~~~v-----~~~~~s~~~~~l~~ 239 (271)
.... ....++|+|+|...++...|+.|.+||+.+ .+.+.++..|..+- .++..+|||++|++
T Consensus 328 ~vG~---gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~ 404 (595)
T 1fwx_A 328 ELGL---GPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVC 404 (595)
T ss_dssp BCCS---CEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEE
T ss_pred CCCC---CcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEE
Confidence 3222 367799999994334555689999999977 56677776654321 23356899999999
Q ss_pred eC----CeE-----------EEEcCCCCCC
Q 024185 240 AS----SVL-----------SFWIPNPSSN 254 (271)
Q Consensus 240 ~~----~~v-----------~iw~~~~~~~ 254 (271)
+. ..+ .++|+.+++.
T Consensus 405 ~Nk~skdr~~~~gp~~~~~~ql~dis~~~m 434 (595)
T 1fwx_A 405 LSKFSKDRFLNVGPLKPENDQLIDISGDKM 434 (595)
T ss_dssp EESCCTTSSCCCCSSCCEEEEEEECSSSSC
T ss_pred cCCCCccccccCCCCCCCcceEEEcCCCcE
Confidence 86 234 8899976654
No 229
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.30 E-value=7.8e-10 Score=96.53 Aligned_cols=226 Identities=11% Similarity=0.042 Sum_probs=137.9
Q ss_pred ecceeEEeeec-----ceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccC------------
Q 024185 9 PITQALLFARQ-----NIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTA------------ 71 (271)
Q Consensus 9 ~~~~~l~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~d------------ 71 (271)
|..+.++++.+ ...+..++..++..... .+. ......++|+ |++. |+.++.+
T Consensus 138 pDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~---~~~--~~k~~~~~Ws-Dg~~-----l~y~~~~~~~~~~~~~~~~ 206 (693)
T 3iuj_A 138 RDGRILAYSLSLAGSDWREIHLMDVESKQPLET---PLK--DVKFSGISWL-GNEG-----FFYSSYDKPDGSELSARTD 206 (693)
T ss_dssp TTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE---EEE--EEESCCCEEE-TTTE-----EEEEESSCCC-------CC
T ss_pred CCCCEEEEEEecCCCceEEEEEEECCCCCCCcc---ccC--CceeccEEEe-CCCE-----EEEEEecCcccccccccCC
Confidence 33455666542 13556666655532111 111 1113467899 9987 4444544
Q ss_pred -ceEEEEEecCcce--eEEEec---CC--cceEEEcCCCCEEEEEec----CCeEEEEeCCCCCCCcceEEEecCCccce
Q 024185 72 -LEYGIFVLMLASF--QGILRL---RG--RPTVAFDQQGLVFAVAME----AGAIKLFDSRSYDKGPFDTFLVGGDTAEV 139 (271)
Q Consensus 72 -g~i~iwd~~~~~~--~~~~~~---~~--~~~~~~~~~~~~l~~~~~----d~~i~i~d~~~~~~~~~~~~~~~~~~~~v 139 (271)
..|++|++.++.. ...+.. +. ...+.|+|||++|+.... .+.|+++|+.++... ...+..+....
T Consensus 207 ~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~---~~~l~~~~~~~ 283 (693)
T 3iuj_A 207 QHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAP---LLTVQGDLDAD 283 (693)
T ss_dssp CCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCC---CEEEECSSSSC
T ss_pred CcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCc---eEEEeCCCCce
Confidence 3499999877653 233332 22 234889999998876543 248999999876421 22333455555
Q ss_pred EEEEEcCCCcEEEEEec----CCeEEEEECCCCeE--EEEeecCCCCCceeeEEECCCCCEEEEecCC-C--cEEEEEcC
Q 024185 140 CDIKFSNDGKSMLLTTT----NNNIYVLDAYGGEK--RCGFSLEPSPNTNTEATFTPDGQYVVSGSGD-G--TLHAWNIN 210 (271)
Q Consensus 140 ~~~~~s~~~~~l~~~~~----d~~i~~~d~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-g--~i~iwd~~ 210 (271)
... |+++|..|+..+. .+.|..+|+.+++. ...+..+... +. .|++++++|+....+ + .|++||+.
T Consensus 284 ~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~--~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~ 358 (693)
T 3iuj_A 284 VSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQ--VL--TVHSGSGYLFAEYMVDATARVEQFDYE 358 (693)
T ss_dssp EEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSS--CE--EEEEETTEEEEEEEETTEEEEEEECTT
T ss_pred EEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCC--EE--EEEEECCEEEEEEEECCeeEEEEEECC
Confidence 554 6676666655543 36899999987654 2345444443 43 889999988876654 3 68999987
Q ss_pred CceeEEEec-CCcceeEEEEEecCCcEEEEe--C----CeEEEEcCCCCCC
Q 024185 211 TRNEVACWN-GNIGVVACLKWAPRRAMFVAA--S----SVLSFWIPNPSSN 254 (271)
Q Consensus 211 ~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~--~----~~v~iw~~~~~~~ 254 (271)
.+. ...+. ...+.+..+.++|++..++.. + +++..||+.+++.
T Consensus 359 g~~-~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~ 408 (693)
T 3iuj_A 359 GKR-VREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAI 408 (693)
T ss_dssp SCE-EEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCE
T ss_pred CCe-eEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeE
Confidence 544 44443 344567788888888755433 3 6799999987754
No 230
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.29 E-value=2.4e-09 Score=86.34 Aligned_cols=170 Identities=10% Similarity=-0.010 Sum_probs=117.0
Q ss_pred eEEEEEecCcceeEEEecCCcceEEEcCCCCEEEEEe----------cCCeEEEEeCCCCCCCcceEEEec--CC---cc
Q 024185 73 EYGIFVLMLASFQGILRLRGRPTVAFDQQGLVFAVAM----------EAGAIKLFDSRSYDKGPFDTFLVG--GD---TA 137 (271)
Q Consensus 73 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----------~d~~i~i~d~~~~~~~~~~~~~~~--~~---~~ 137 (271)
.|.++|..+++.+..++....+.++++||+++++++. .++.|.+||..+.+. .....+. .+ ..
T Consensus 48 ~v~v~D~~t~~~~~~i~~g~~p~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~--~~~i~~~~~~~~~~g~ 125 (373)
T 2mad_H 48 QQWVLDAGSGSILGHVNGGFLPNPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLP--IADIELPDAPRFDVGP 125 (373)
T ss_pred EEEEEECCCCeEEEEecCCCCCCeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcE--EEEEECCCccccccCC
Confidence 8899999999988888765555899999999999886 367899999987664 2232222 00 12
Q ss_pred ceEEEEEcCCCcEEEEEec--CCeEEEEECCCCeEEEE-eecCCCCCceeeEEECCCCC-EEEEecCCCcEEEEEcCCce
Q 024185 138 EVCDIKFSNDGKSMLLTTT--NNNIYVLDAYGGEKRCG-FSLEPSPNTNTEATFTPDGQ-YVVSGSGDGTLHAWNINTRN 213 (271)
Q Consensus 138 ~v~~~~~s~~~~~l~~~~~--d~~i~~~d~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~ 213 (271)
....++|+|||++|++++. ++.|.++| .+++.+.. +.... ++.+.|+++ .+++.+.||.+.++|. +++
T Consensus 126 ~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~------~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~ 197 (373)
T 2mad_H 126 YSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPT------CYHIHPGAPSTFYLLCAQGGLAKTDH-AGG 197 (373)
T ss_pred CccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCc------eEEEEeCCCceEEEEcCCCCEEEEEC-CCc
Confidence 3458899999999999874 57899999 99988777 54322 144556653 4556677999999999 877
Q ss_pred eEEEec-----CCcce-eEEEEEecCCcE-EEEeC-CeEEEEcCCCC
Q 024185 214 EVACWN-----GNIGV-VACLKWAPRRAM-FVAAS-SVLSFWIPNPS 252 (271)
Q Consensus 214 ~~~~~~-----~~~~~-v~~~~~s~~~~~-l~~~~-~~v~iw~~~~~ 252 (271)
...... ....+ .....+.+++.. ++... +.+.+.|+.+.
T Consensus 198 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~ 244 (373)
T 2mad_H 198 AAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAA 244 (373)
T ss_pred EEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCC
Confidence 764321 11111 133456666543 33333 78888888654
No 231
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.28 E-value=3.5e-10 Score=90.33 Aligned_cols=199 Identities=8% Similarity=0.018 Sum_probs=126.1
Q ss_pred ceEEeeEEecCCchhhhhhhhhhc--cCceEEEEEecCcceeEEEec---------CCcceEEEcCCCCEEEEEec----
Q 024185 46 GIRRGLFLSACLQLMIALCLVLLT--TALEYGIFVLMLASFQGILRL---------RGRPTVAFDQQGLVFAVAME---- 110 (271)
Q Consensus 46 ~~v~~~~~s~~~~~~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~~---------~~~~~~~~~~~~~~l~~~~~---- 110 (271)
.....++++|+|+. +++.. .++.++||.+.+++ +..+.. ..+..++++++++++++-..
T Consensus 17 ~~p~~va~~~~g~~-----~v~~~~~~~~~~~l~~~~~g~-~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~ 90 (343)
T 2qe8_A 17 LAPGNITLTPDGRL-----FLSLHQFYQPEMQVAELTQDG-LIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSK 90 (343)
T ss_dssp SCEEEEEECTTSCE-----EEEECGGGCCSCSEEEEETTE-EEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHT
T ss_pred CCcceEEECCCCCE-----EEEeCCCCCCceEEEEECCCC-eecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcC
Confidence 56677999999987 44532 23436677766554 332321 12455999999886555443
Q ss_pred -CCeEEEEeCCCCCCCcceEEEec----CCccceEEEEEcCCCcEE-EEEe---cCCeEEEEECCCCeEEEEeecCCC--
Q 024185 111 -AGAIKLFDSRSYDKGPFDTFLVG----GDTAEVCDIKFSNDGKSM-LLTT---TNNNIYVLDAYGGEKRCGFSLEPS-- 179 (271)
Q Consensus 111 -d~~i~i~d~~~~~~~~~~~~~~~----~~~~~v~~~~~s~~~~~l-~~~~---~d~~i~~~d~~~~~~~~~~~~~~~-- 179 (271)
++.|.+||+.+++. .....+. .+......++++|++..+ ++-. .++.|.+||+.+++..+.+..+..
T Consensus 91 ~~~~i~~~d~~tg~~--~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~ 168 (343)
T 2qe8_A 91 SVPKLVAWDTLNNQL--SRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIA 168 (343)
T ss_dssp SCCEEEEEETTTTEE--EEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTS
T ss_pred CCCeEEEEECCCCeE--EEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCccc
Confidence 57899999988764 2233332 122356899999865444 4444 578999999988876665533110
Q ss_pred -------------------------CCceeeEEECCCCCEEEEecCCC-cEEEEEcC---Cce-----e---EEEecCCc
Q 024185 180 -------------------------PNTNTEATFTPDGQYVVSGSGDG-TLHAWNIN---TRN-----E---VACWNGNI 222 (271)
Q Consensus 180 -------------------------~~~v~~~~~~~~~~~l~~~~~dg-~i~iwd~~---~~~-----~---~~~~~~~~ 222 (271)
...+..++|+|||+.|+.+..++ .+..++.. .+. . +. ..++.
T Consensus 169 ~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~g~~ 247 (343)
T 2qe8_A 169 PEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIE-RYSEK 247 (343)
T ss_dssp CCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCE-EEEEC
T ss_pred ccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceE-ecccC
Confidence 01257799999999888877655 55555532 110 0 11 11233
Q ss_pred ceeEEEEEecCCcEEEEeC--CeEEEEcCCCCC
Q 024185 223 GVVACLKWAPRRAMFVAAS--SVLSFWIPNPSS 253 (271)
Q Consensus 223 ~~v~~~~~s~~~~~l~~~~--~~v~iw~~~~~~ 253 (271)
+....++++++|+++++.. +.|.+||.++++
T Consensus 248 g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~ 280 (343)
T 2qe8_A 248 PICDGISIDKDHNIYVGDLAHSAIGVITSADRA 280 (343)
T ss_dssp CSCSCEEECTTCCEEEEEGGGTEEEEEETTTTE
T ss_pred CCCceEEECCCCCEEEEccCCCeEEEEECCCCC
Confidence 3456799999999888776 789999985454
No 232
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.26 E-value=2.1e-09 Score=80.90 Aligned_cols=191 Identities=9% Similarity=0.011 Sum_probs=129.6
Q ss_pred EEEEEcccccce-EEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEecCCc-ceEEEcCCCCEEEEE-ecCC
Q 024185 36 MIIEFFATSKGI-RRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILRLRGR-PTVAFDQQGLVFAVA-MEAG 112 (271)
Q Consensus 36 ~~~~~~~~~~~~-v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~-~~d~ 112 (271)
..++.+.+.... ...+.++. +.. +.+.+.+|.|+.+|+++++.++.+ .... ......++++.|+.. -.++
T Consensus 44 ~Vv~~~phd~~~ftqGL~~~~-~~L-----y~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~~ 116 (268)
T 3nok_A 44 HIIREYPHATNAFTQGLVFHQ-GHF-----FESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTEG 116 (268)
T ss_dssp EEEEEEECCTTCCEEEEEEET-TEE-----EEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSSC
T ss_pred EEEEEEcCCCccccceEEEEC-CEE-----EEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccCC
Confidence 344555443333 46788874 444 568888889999999999988887 4432 222233345444444 5678
Q ss_pred eEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEecCCeEEEEECCCCeEEEEeecCCCC---CceeeEEEC
Q 024185 113 AIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSP---NTNTEATFT 189 (271)
Q Consensus 113 ~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~---~~v~~~~~~ 189 (271)
.+.+||.++.+. +..+...++ -. .+++|++.|+.+..++.|.++|..+.+.+.++.....+ ..++.+.|.
T Consensus 117 ~v~V~D~~Tl~~--~~ti~~~~e---Gw--GLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~ 189 (268)
T 3nok_A 117 LLFTWSGMPPQR--ERTTRYSGE---GW--GLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA 189 (268)
T ss_dssp EEEEEETTTTEE--EEEEECSSC---CC--CEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE
T ss_pred EEEEEECCcCcE--EEEEeCCCc---ee--EEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe
Confidence 999999998875 334443322 12 33367888888877999999999999988887654432 234567776
Q ss_pred CCCCEEEEecCCCcEEEEEcCCceeEEEecCC-------------cceeEEEEEecCCcEEEEeC
Q 024185 190 PDGQYVVSGSGDGTLHAWNINTRNEVACWNGN-------------IGVVACLKWAPRRAMFVAAS 241 (271)
Q Consensus 190 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-------------~~~v~~~~~s~~~~~l~~~~ 241 (271)
+|+..+..-.++.|.+.|.++++.+..+... ....+.++|+|+++.|+..+
T Consensus 190 -dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 190 -NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp -TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred -CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 7776666656889999999999998877432 12468999999766554444
No 233
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.24 E-value=1.9e-09 Score=85.19 Aligned_cols=216 Identities=12% Similarity=0.077 Sum_probs=142.0
Q ss_pred ceeEEeeecceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEec
Q 024185 11 TQALLFARQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILRL 90 (271)
Q Consensus 11 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 90 (271)
...+.++..++.+..++.. +.. ...+......+..+...+++.. ..++.++.+..+|.+ ++....+..
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~----~~~~~~~~~~~~~~~~~~~g~l------~vgt~~~~l~~~d~~-g~~~~~~~~ 174 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTE----KWRFKTKKAIYATPIVSEDGTI------YVGSNDNYLYAINPD-GTEKWRFKT 174 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCE----EEEEECSSCCCSCCEECTTSCE------EEECTTSEEEEECTT-SCEEEEEEC
T ss_pred CCEEEEEecCCEEEEEcCC-CCE----EEEEcCCCceeeeeEEcCCCEE------EEEcCCCEEEEECCC-CCEeEEEec
Confidence 4556666667778887765 421 1123334444555666667764 356778899999998 776666654
Q ss_pred C--CcceEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEecCCeEEEEECCCC
Q 024185 91 R--GRPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGG 168 (271)
Q Consensus 91 ~--~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~~~ 168 (271)
. ....+...+++.. ..++ +.+..+| .+++. ..........+.++...++|. +..++.++.+..+| .++
T Consensus 175 ~~~~~~~~~~d~~g~l-~v~t--~~l~~~d-~~g~~----~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~-~~g 244 (330)
T 3hxj_A 175 NDAITSAASIGKDGTI-YFGS--DKVYAIN-PDGTE----KWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAIN-PDG 244 (330)
T ss_dssp SSCCCSCCEECTTCCE-EEES--SSEEEEC-TTSCE----EEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEEC-TTS
T ss_pred CCCceeeeEEcCCCEE-EEEe--CEEEEEC-CCCcE----EEEEccCCcceeceEECCCCe-EEEEcCCCeEEEEC-CCC
Confidence 3 3445677777774 4444 7899999 55553 444444456688888888875 66677788899898 456
Q ss_pred eEEEEeecCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCCceeEEEecCCcceeEEEEEecCCcEEEEeC-CeEEEE
Q 024185 169 EKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS-SVLSFW 247 (271)
Q Consensus 169 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~~v~iw 247 (271)
+.+..+...... +..+...++++ +..++.+|.+..+|. +++.+..+......+.++...++|++.+.+. |.+++.
T Consensus 245 ~~~~~~~~~~~~--~~~~~~~~~g~-l~v~t~~ggl~~~d~-~g~~~~~~~~~~~~~~~~~~d~~g~l~~gt~~G~~~~~ 320 (330)
T 3hxj_A 245 TEKWRFKTGKRI--ESSPVIGNTDT-IYFGSYDGHLYAINP-DGTEKWNFETGSWIIATPVIDENGTIYFGTRNGKFYAL 320 (330)
T ss_dssp CEEEEEECSSCC--CSCCEECTTSC-EEEECTTCEEEEECT-TSCEEEEEECSSCCCSCCEECTTCCEEEECTTSCEEEE
T ss_pred CEeEEeeCCCCc--cccceEcCCCe-EEEecCCCCEEEECC-CCcEEEEEEcCCccccceEEcCCCEEEEEcCCCeEEEE
Confidence 666665543332 34466666665 566777888999996 7777776665556677888888888777666 878887
Q ss_pred cCCCC
Q 024185 248 IPNPS 252 (271)
Q Consensus 248 ~~~~~ 252 (271)
..+..
T Consensus 321 ~~~~~ 325 (330)
T 3hxj_A 321 FNLEH 325 (330)
T ss_dssp EC---
T ss_pred ecccc
Confidence 65543
No 234
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.23 E-value=1.3e-07 Score=72.61 Aligned_cols=201 Identities=11% Similarity=0.007 Sum_probs=126.7
Q ss_pred ceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEec--CCcceEEEcCCCCEEEEE-ecCCeEEEEeCCCC
Q 024185 46 GIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILRL--RGRPTVAFDQQGLVFAVA-MEAGAIKLFDSRSY 122 (271)
Q Consensus 46 ~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~ 122 (271)
.....+++++++..+ +++-...+.|..++.+.+.....+.. .....+++++++..|+.+ ..++.|.+++....
T Consensus 36 ~~~~gi~~d~~~~~l----y~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~ 111 (267)
T 1npe_A 36 KVIIGLAFDCVDKVV----YWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGT 111 (267)
T ss_dssp EEEEEEEEETTTTEE----EEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CcEEEEEEecCCCEE----EEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCC
Confidence 456789999976653 34556678999999976654433332 234569999987666655 45679999998754
Q ss_pred CCCcceEEEecCCccceEEEEEcCCCcEEEEEec---CCeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEe-
Q 024185 123 DKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTT---NNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSG- 198 (271)
Q Consensus 123 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~---d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~- 198 (271)
.. .............++++|++..|+.+.. .+.|..+++... ....+.. ........++++|++..|+.+
T Consensus 112 ~~----~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~-~~~~~~~-~~~~~P~gia~d~~~~~lyv~d 185 (267)
T 1npe_A 112 QR----RVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGT-NRRILAQ-DNLGLPNGLTFDAFSSQLCWVD 185 (267)
T ss_dssp SC----EEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSC-CCEEEEC-TTCSCEEEEEEETTTTEEEEEE
T ss_pred CE----EEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCC-CcEEEEE-CCCCCCcEEEEcCCCCEEEEEE
Confidence 42 2222222245789999997666665553 468888887533 2233321 111346789999987766555
Q ss_pred cCCCcEEEEEcCCceeEEEecCCcceeEEEEEecCCcEEEEeC--CeEEEEcCCCCCCCcCC
Q 024185 199 SGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNPSSNSTDE 258 (271)
Q Consensus 199 ~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~~v~iw~~~~~~~~~~~ 258 (271)
...+.|..+|+........+... .....++.. ++.++++.. +.|..+|..+++.....
T Consensus 186 ~~~~~I~~~~~~g~~~~~~~~~~-~~P~gi~~d-~~~lyva~~~~~~v~~~d~~~g~~~~~i 245 (267)
T 1npe_A 186 AGTHRAECLNPAQPGRRKVLEGL-QYPFAVTSY-GKNLYYTDWKTNSVIAMDLAISKEMDTF 245 (267)
T ss_dssp TTTTEEEEEETTEEEEEEEEECC-CSEEEEEEE-TTEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CCCCEEEEEecCCCceEEEecCC-CCceEEEEe-CCEEEEEECCCCeEEEEeCCCCCceEEE
Confidence 44679999999755443333332 223566654 344444432 78999999888765544
No 235
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.22 E-value=1.2e-08 Score=76.27 Aligned_cols=192 Identities=9% Similarity=0.041 Sum_probs=129.6
Q ss_pred EEEEEccccc-ceEEeeEEecCCchhhhhhhhhhccC--ceEEEEEecCcceeEEEecCCc-ceEEEcCCCCEEEEE-ec
Q 024185 36 MIIEFFATSK-GIRRGLFLSACLQLMIALCLVLLTTA--LEYGIFVLMLASFQGILRLRGR-PTVAFDQQGLVFAVA-ME 110 (271)
Q Consensus 36 ~~~~~~~~~~-~~v~~~~~s~~~~~~~~~~l~s~~~d--g~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~-~~ 110 (271)
..++.+.+.. .-...+.|++ +.. +.+.+.+ ..|+.+|+++++.++.+..... ......++++.|+.. -.
T Consensus 10 ~v~~~~phd~~~ftqGL~~~~-~~L-----yestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~ 83 (243)
T 3mbr_X 10 RVVKRYPHDTTAFTEGLFYLR-GHL-----YESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWR 83 (243)
T ss_dssp EEEEEEECCTTCCEEEEEEET-TEE-----EEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESS
T ss_pred EEEEEcCCCCccccccEEEEC-CEE-----EEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEee
Confidence 4445553333 3456788887 444 4466665 4899999999999988876543 223233345555544 56
Q ss_pred CCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEecCCeEEEEECCCCeEEEEeecCCCC---CceeeEE
Q 024185 111 AGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSP---NTNTEAT 187 (271)
Q Consensus 111 d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~---~~v~~~~ 187 (271)
++.+.+||.++.+. ...+...++ - ..+.++++.|+.+..++.|.++|..+.+.+.++.....+ ..++.+.
T Consensus 84 ~~~v~v~D~~tl~~--~~ti~~~~~---G--wglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe 156 (243)
T 3mbr_X 84 NHEGFVYDLATLTP--RARFRYPGE---G--WALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELE 156 (243)
T ss_dssp SSEEEEEETTTTEE--EEEEECSSC---C--CEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEE
T ss_pred CCEEEEEECCcCcE--EEEEeCCCC---c--eEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeE
Confidence 88999999998775 344444322 1 233467777877777899999999999988887654322 2345566
Q ss_pred ECCCCCEEEEecCCCcEEEEEcCCceeEEEecCC-------------cceeEEEEEecCCcEEEEeC
Q 024185 188 FTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGN-------------IGVVACLKWAPRRAMFVAAS 241 (271)
Q Consensus 188 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-------------~~~v~~~~~s~~~~~l~~~~ 241 (271)
+. +|+..+..-.+..|.+.|.++++.+..+... ....+.++++|+++.|...+
T Consensus 157 ~~-~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 157 WV-NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp EE-TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred Ee-CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 65 6776666656789999999999998887421 12468999999877665555
No 236
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.21 E-value=8.9e-10 Score=89.77 Aligned_cols=163 Identities=16% Similarity=0.092 Sum_probs=106.2
Q ss_pred EeeEEecCCchhhhhhhhhhc-cCceEEEEEecCcceeEEEecCCc---------ceEEEcCCCCEEEEE----------
Q 024185 49 RGLFLSACLQLMIALCLVLLT-TALEYGIFVLMLASFQGILRLRGR---------PTVAFDQQGLVFAVA---------- 108 (271)
Q Consensus 49 ~~~~~s~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~---------~~~~~~~~~~~l~~~---------- 108 (271)
..+.++|+|+++++ +.. .++.|.+.|+.+++.+..+...+. ..++++++|++++..
T Consensus 180 ~~~~~spDGk~lyV----~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~ 255 (426)
T 3c75_H 180 WMNALTPDNKNLLF----YQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFADGETKVTN 255 (426)
T ss_dssp GGSEECTTSSEEEE----EECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEE
T ss_pred ceEEEcCCCCEEEE----EecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEe
Confidence 45889999998432 322 368899999999988877765321 113444444443333
Q ss_pred ---------------------------ecCCeEEEEeCCCCCCCcceEEEecC--------CccceEEEEEcCCCcEEEE
Q 024185 109 ---------------------------MEAGAIKLFDSRSYDKGPFDTFLVGG--------DTAEVCDIKFSNDGKSMLL 153 (271)
Q Consensus 109 ---------------------------~~d~~i~i~d~~~~~~~~~~~~~~~~--------~~~~v~~~~~s~~~~~l~~ 153 (271)
+..+.+.+.|...........+.+.. .......++++|+++++++
T Consensus 256 ~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyV 335 (426)
T 3c75_H 256 TEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYL 335 (426)
T ss_dssp CCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEE
T ss_pred eeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEE
Confidence 33344444444332210000111000 0111223689999888877
Q ss_pred Eec----------CCeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCC-EEEEec-CCCcEEEEEcCCceeEEEe
Q 024185 154 TTT----------NNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQ-YVVSGS-GDGTLHAWNINTRNEVACW 218 (271)
Q Consensus 154 ~~~----------d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~-~dg~i~iwd~~~~~~~~~~ 218 (271)
... ++.|.++|+.+.+.+.++..... ...+.|+|||+ ++++.. .++.|.++|+.+++.+.++
T Consensus 336 a~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~~---P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 336 LVDQRDEWKHKAASRFVVVLNAETGERINKIELGHE---IDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp EEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEE---ECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred EecccccccccCCCCEEEEEECCCCeEEEEEECCCC---cCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 653 35799999999999998875543 66799999999 888887 4899999999999999987
No 237
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.18 E-value=1.9e-09 Score=85.25 Aligned_cols=212 Identities=12% Similarity=0.099 Sum_probs=139.7
Q ss_pred ceeEEeeecceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEec
Q 024185 11 TQALLFARQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILRL 90 (271)
Q Consensus 11 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 90 (271)
...+.++..++.+..++ ..+. ....+......+..+...+++.. ..++.+ +..+|. +++.+..+..
T Consensus 30 ~g~l~v~t~~~~l~~~d-~~g~----~~~~~~~~~~~~~~~~~~~~g~l------~v~t~~--l~~~d~-~g~~~~~~~~ 95 (330)
T 3hxj_A 30 NGTIYLGSSNKNLYAIN-TDGS----VKWFFKSGEIIECRPSIGKDGTI------YFGSDK--VYAINP-DGTEKWRFDT 95 (330)
T ss_dssp TSCEECSSTTTTTEEEC-TTSC----EEESSCGGGEEEECCEETTTTEE------CCSSCE--EEEECC-CGGGGGGSCC
T ss_pred CCeEEEEcCCCEEEEEC-CCCc----EEEEEecCCCcccceEEecCCcE------EEecCc--EEEECC-CCcEEEEEEC
Confidence 34566666677888888 5552 22224444455667777777775 233434 888886 5654443332
Q ss_pred CC--cceEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEecCCeEEEEECCCC
Q 024185 91 RG--RPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGG 168 (271)
Q Consensus 91 ~~--~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~~~ 168 (271)
.. .....+. +..+.+++.++.+..+|.. ++. ......+...+.++...+++. ++.++.++.+..+|.. +
T Consensus 96 ~~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~----~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g 166 (330)
T 3hxj_A 96 KKAIVSDFTIF--EDILYVTSMDGHLYAINTD-GTE----KWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-G 166 (330)
T ss_dssp -----CCEEEE--TTEEEEECTTSEEEEECTT-SCE----EEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-S
T ss_pred CCCcccCceEE--CCEEEEEecCCEEEEEcCC-CCE----EEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-C
Confidence 22 2223333 5567888888999999988 553 333334445566777777776 6677888999999988 7
Q ss_pred eEEEEeecCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCCceeEEEecCCcceeEEEEEecCCcEEEEeC-CeEEEE
Q 024185 169 EKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS-SVLSFW 247 (271)
Q Consensus 169 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~~v~iw 247 (271)
+....+...... +.++...+++...+.. +.+..+| .+++.+.........+.++...++|.+.+... +.+..+
T Consensus 167 ~~~~~~~~~~~~--~~~~~~d~~g~l~v~t---~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~~gl~~~ 240 (330)
T 3hxj_A 167 TEKWRFKTNDAI--TSAASIGKDGTIYFGS---DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGTIYVTSLDGHLYAI 240 (330)
T ss_dssp CEEEEEECSSCC--CSCCEECTTCCEEEES---SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSCEEEEETTTEEEEE
T ss_pred CEeEEEecCCCc--eeeeEEcCCCEEEEEe---CEEEEEC-CCCcEEEEEccCCcceeceEECCCCeEEEEcCCCeEEEE
Confidence 777666544333 6667888888755544 7899999 78887777765556688888888888777665 778888
Q ss_pred cCCC
Q 024185 248 IPNP 251 (271)
Q Consensus 248 ~~~~ 251 (271)
|...
T Consensus 241 ~~~g 244 (330)
T 3hxj_A 241 NPDG 244 (330)
T ss_dssp CTTS
T ss_pred CCCC
Confidence 7543
No 238
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.15 E-value=9.9e-09 Score=89.35 Aligned_cols=161 Identities=12% Similarity=0.126 Sum_probs=110.8
Q ss_pred eEEEEEecCcceeEEEecC--C-----c---ce-EEEcCCCC---EEEEEecCCeEEEEeCCCCCCCcceEEEecC----
Q 024185 73 EYGIFVLMLASFQGILRLR--G-----R---PT-VAFDQQGL---VFAVAMEAGAIKLFDSRSYDKGPFDTFLVGG---- 134 (271)
Q Consensus 73 ~i~iwd~~~~~~~~~~~~~--~-----~---~~-~~~~~~~~---~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~---- 134 (271)
.|..+|.++|+.+..++.. . . .. .....+|+ .++.++.+|.++++|.++++. +....+..
T Consensus 276 ~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~--l~~~~~~~~~w~ 353 (689)
T 1yiq_A 276 SIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGEL--LSAKGIVPQSWT 353 (689)
T ss_dssp EEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCE--EEEEESSCCSSE
T ss_pred eEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCE--eccccccccccc
Confidence 4999999999998887642 1 1 11 22223564 788889999999999999885 11111100
Q ss_pred ----------------------Ccc-----------ceEEEEEcCCCcEEEEEec-------------------------
Q 024185 135 ----------------------DTA-----------EVCDIKFSNDGKSMLLTTT------------------------- 156 (271)
Q Consensus 135 ----------------------~~~-----------~v~~~~~s~~~~~l~~~~~------------------------- 156 (271)
... .-..++++|+..++++...
T Consensus 354 ~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g 433 (689)
T 1yiq_A 354 KGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLG 433 (689)
T ss_dssp EEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCS
T ss_pred cccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccC
Confidence 000 0123688998887776532
Q ss_pred --------------------CCeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCCceeEE
Q 024185 157 --------------------NNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVA 216 (271)
Q Consensus 157 --------------------d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 216 (271)
+|.|..||+.+++.+..+..+.. .....+...+..++.++.||.++.||.++|+.+.
T Consensus 434 ~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~---~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw 510 (689)
T 1yiq_A 434 LRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTI---FNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLW 510 (689)
T ss_dssp SEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSS---CCCCEEEETTTEEEEECTTSEEEEEETTTCCEEE
T ss_pred ccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCC---ccCccceECCCEEEEECCCCcEEEEECCCCccce
Confidence 37899999999999888776543 2223556677899999999999999999999998
Q ss_pred EecCCcce-eEEEEEecCCcEEE
Q 024185 217 CWNGNIGV-VACLKWAPRRAMFV 238 (271)
Q Consensus 217 ~~~~~~~~-v~~~~~s~~~~~l~ 238 (271)
+++...+. ..-+.|..+|+..+
T Consensus 511 ~~~~~~~~~~~p~ty~~~G~qyv 533 (689)
T 1yiq_A 511 EQPAASGVMAAPVTYSVDGEQYV 533 (689)
T ss_dssp EEECSSCCCSCCEEEEETTEEEE
T ss_pred eeeCCCCcccCceEEEECCEEEE
Confidence 88654332 24567788888443
No 239
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.15 E-value=8.6e-09 Score=89.55 Aligned_cols=161 Identities=14% Similarity=0.091 Sum_probs=112.5
Q ss_pred eEEEEEecCcceeEEEecC--C--------cce-EEEcCCC---CEEEEEecCCeEEEEeCCCCCCCcceEEEecC----
Q 024185 73 EYGIFVLMLASFQGILRLR--G--------RPT-VAFDQQG---LVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGG---- 134 (271)
Q Consensus 73 ~i~iwd~~~~~~~~~~~~~--~--------~~~-~~~~~~~---~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~---- 134 (271)
.|..+|.++|+.+..++.. . .+. +....+| +.++.++.+|.++++|.++++. +....+..
T Consensus 284 sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~--l~~~~~~~~~~~ 361 (677)
T 1kb0_A 284 SIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKF--ISAKNFVPVNWA 361 (677)
T ss_dssp EEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCE--EEEEESSCCSSE
T ss_pred EEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCE--eccccccccCcc
Confidence 5999999999988887642 1 112 3334477 6788899999999999999885 21111110
Q ss_pred -----Cccce------------------------EEEEEcCCCcEEEEEecC----------------------------
Q 024185 135 -----DTAEV------------------------CDIKFSNDGKSMLLTTTN---------------------------- 157 (271)
Q Consensus 135 -----~~~~v------------------------~~~~~s~~~~~l~~~~~d---------------------------- 157 (271)
...++ ..++++|++.++++...+
T Consensus 362 ~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 441 (677)
T 1kb0_A 362 SGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWN 441 (677)
T ss_dssp EEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCC
T ss_pred cccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccc
Confidence 00001 256889988888776432
Q ss_pred ---------------CeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCCceeEEEecCCc
Q 024185 158 ---------------NNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNI 222 (271)
Q Consensus 158 ---------------~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 222 (271)
+.|..||+.+++.+..+..... .....+.+++..++.++.||.+++||.++++.+..+....
T Consensus 442 ~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~---~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~ 518 (677)
T 1kb0_A 442 TAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSP---WNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGT 518 (677)
T ss_dssp CCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESSS---CCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred cccccccccCCCCCccEEEEEeCCCCcEEeecCCCCC---CcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCC
Confidence 7899999999999888764432 3334566778888999999999999999999999886433
Q ss_pred -ceeEEEEEecCCcEEE
Q 024185 223 -GVVACLKWAPRRAMFV 238 (271)
Q Consensus 223 -~~v~~~~~s~~~~~l~ 238 (271)
....-+.|.++|+.++
T Consensus 519 ~~~~~p~~y~~~G~~~v 535 (677)
T 1kb0_A 519 GVVAAPSTYMVDGRQYV 535 (677)
T ss_dssp CCCSCCEEEEETTEEEE
T ss_pred CcccCCEEEEeCCEEEE
Confidence 2234466778887444
No 240
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.14 E-value=3.3e-09 Score=88.81 Aligned_cols=188 Identities=12% Similarity=0.055 Sum_probs=132.3
Q ss_pred eeEEec-----CCchhhhhhhhhhccCceEEEEEecCcceeEEEec---CCcceEEE-c-CCCCEEEEEe----------
Q 024185 50 GLFLSA-----CLQLMIALCLVLLTTALEYGIFVLMLASFQGILRL---RGRPTVAF-D-QQGLVFAVAM---------- 109 (271)
Q Consensus 50 ~~~~s~-----~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~---~~~~~~~~-~-~~~~~l~~~~---------- 109 (271)
...+|. ||+++ ++....++.|.+.|+++.+..+.+.. .+...+++ + |+++++++++
T Consensus 89 h~~~s~t~g~~DG~~l----fVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg 164 (595)
T 1fwx_A 89 HVHMSFTEGKYDGRFL----FMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDG 164 (595)
T ss_dssp CEEEEEETTEEEEEEE----EEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSS
T ss_pred ccccCCCCCCcCCCEE----EEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCC
Confidence 355555 77775 44667788899999999998885543 33445777 5 9999998885
Q ss_pred --------cCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEecCC-----------------------
Q 024185 110 --------EAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNN----------------------- 158 (271)
Q Consensus 110 --------~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~----------------------- 158 (271)
.++.+.+.|.++.+. .......+ ....++++|+|+++++++.+.
T Consensus 165 ~~l~~~~~~~~~vtvID~~t~~v--~~qI~Vgg---~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~ 239 (595)
T 1fwx_A 165 TNMEDVANYVNVFTAVDADKWEV--AWQVLVSG---NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIA 239 (595)
T ss_dssp SSTTCGGGEEEEEEEEETTTTEE--EEEEEESS---CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHH
T ss_pred cccccccccCceEEEEECCCCeE--EEEEEeCC---CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeecc
Confidence 245799999998764 22222322 345678999999999888542
Q ss_pred ---------------eEEEEECCC--CeE-EEEeecCCCCCceeeEEECCCCCEEEEecC-CCcEEEEEcCCce------
Q 024185 159 ---------------NIYVLDAYG--GEK-RCGFSLEPSPNTNTEATFTPDGQYVVSGSG-DGTLHAWNINTRN------ 213 (271)
Q Consensus 159 ---------------~i~~~d~~~--~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~------ 213 (271)
.|.+.|.++ ++. +..+..... ..++.++|||+++++++. +.+|.++|+.+.+
T Consensus 240 ~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg~~---PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~ 316 (595)
T 1fwx_A 240 EIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIANN---PHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYEN 316 (595)
T ss_dssp HHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEEESS---CCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSC
T ss_pred ceeEeccCCCeeEECcEEEEeCcccCCceeEEEEecCCC---ceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccc
Confidence 477777776 444 455544333 455999999998887665 7899999998653
Q ss_pred ------eEEEecCCcceeEEEEEecCCcEEEEeC---CeEEEEcCCC
Q 024185 214 ------EVACWNGNIGVVACLKWAPRRAMFVAAS---SVLSFWIPNP 251 (271)
Q Consensus 214 ------~~~~~~~~~~~v~~~~~s~~~~~l~~~~---~~v~iw~~~~ 251 (271)
.....+. ......++|+|+| .+.+.. ++|.+||++.
T Consensus 317 l~~~~~v~~~v~v-G~gP~h~aF~~dG-~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 317 ADPRSAVVAEPEL-GLGPLHTAFDGRG-NAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp CCGGGGEEECCBC-CSCEEEEEECTTS-EEEEEETTTTEEEEEEHHH
T ss_pred cCcccceEEEcCC-CCCcceEEECCCC-eEEEEEecCCcEEEEEhhH
Confidence 3344432 3346899999999 555543 8899999876
No 241
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.11 E-value=8.4e-08 Score=77.38 Aligned_cols=171 Identities=17% Similarity=0.081 Sum_probs=113.3
Q ss_pred hhhhccCceEEEEEecCcceeEEEecCCc------------ce-EEEcCCCCEEEEEecCCeEEEEeCCCCCCCcceEEE
Q 024185 65 LVLLTTALEYGIFVLMLASFQGILRLRGR------------PT-VAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFL 131 (271)
Q Consensus 65 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~------------~~-~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~ 131 (271)
++.+..++.+..+|.++++.+........ .. ... .+..+++++.++.+..+|.++++. ...
T Consensus 191 v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~v~~~~~~g~l~~~d~~tG~~----~w~ 264 (376)
T 3q7m_A 191 AVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVV--VNGVVFALAYNGNLTALDLRSGQI----MWK 264 (376)
T ss_dssp EEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEE--ETTEEEEECTTSCEEEEETTTCCE----EEE
T ss_pred EEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEE--ECCEEEEEecCcEEEEEECCCCcE----Eee
Confidence 44667789999999999998777654311 01 111 246688888899999999998875 333
Q ss_pred ecCCccceEEEEEcCCCcEEEEEecCCeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCC
Q 024185 132 VGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINT 211 (271)
Q Consensus 132 ~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 211 (271)
... .....+.. ++..++.++.++.+..+|..+++.+......... ....+.. .+..++.++.+|.+..+|..+
T Consensus 265 ~~~--~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~-~~~~~~~--~~~~l~v~~~~g~l~~~d~~t 337 (376)
T 3q7m_A 265 REL--GSVNDFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHR-LLTSPVL--YNGNLVVGDSEGYLHWINVED 337 (376)
T ss_dssp ECC--CCEEEEEE--ETTEEEEEETTCCEEEEETTTCCEEEEECTTTTS-CCCCCEE--ETTEEEEECTTSEEEEEETTT
T ss_pred ccC--CCCCCceE--ECCEEEEEcCCCeEEEEECCCCcEEEeecccCCC-cccCCEE--ECCEEEEEeCCCeEEEEECCC
Confidence 321 23344433 3567888888999999999999987766522111 1222333 245788888999999999999
Q ss_pred ceeEEEecCCcceeEEEEEecCCcEEEEeC-CeEEEEc
Q 024185 212 RNEVACWNGNIGVVACLKWAPRRAMFVAAS-SVLSFWI 248 (271)
Q Consensus 212 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~~v~iw~ 248 (271)
++.+.........+.......++++++... |.+..|+
T Consensus 338 G~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 338 GRFVAQQKVDSSGFQTEPVAADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp CCEEEEEECCTTCBCSCCEEETTEEEEEBTTSCEEEEE
T ss_pred CcEEEEEecCCCcceeCCEEECCEEEEEeCCCEEEEEe
Confidence 999887765333333222223555555444 7888886
No 242
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.08 E-value=7e-07 Score=68.43 Aligned_cols=177 Identities=8% Similarity=-0.029 Sum_probs=113.5
Q ss_pred ceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEec--CCcceEEEcCCCCEEEEEec---CCeEEEEeCC
Q 024185 46 GIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILRL--RGRPTVAFDQQGLVFAVAME---AGAIKLFDSR 120 (271)
Q Consensus 46 ~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~---d~~i~i~d~~ 120 (271)
.....+++++++..+ +++....+.|.+++.+.......... .....++++|++..|+.+.. .+.|..+++.
T Consensus 79 ~~p~~ia~d~~~~~l----yv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~d 154 (267)
T 1npe_A 79 GSPEGIALDHLGRTI----FWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMD 154 (267)
T ss_dssp CCEEEEEEETTTTEE----EEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETT
T ss_pred CCccEEEEEecCCeE----EEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecC
Confidence 456779999876543 33556678899999865433222222 23455999997776666654 3688888886
Q ss_pred CCCCCcceEEEecCCccceEEEEEcCCCcEEEEEe-cCCeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEe-
Q 024185 121 SYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTT-TNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSG- 198 (271)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~- 198 (271)
.... .............++++|++..|+.+. ..+.|..+|.........+.... ....++.. +..++.+
T Consensus 155 g~~~----~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~---~P~gi~~d--~~~lyva~ 225 (267)
T 1npe_A 155 GTNR----RILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQ---YPFAVTSY--GKNLYYTD 225 (267)
T ss_dssp SCCC----EEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECCC---SEEEEEEE--TTEEEEEE
T ss_pred CCCc----EEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecCCC---CceEEEEe--CCEEEEEE
Confidence 5432 111222234578899999877666555 46899999987544333333212 24456554 4455544
Q ss_pred cCCCcEEEEEcCCceeEEEecCCc-ceeEEEEEecCCc
Q 024185 199 SGDGTLHAWNINTRNEVACWNGNI-GVVACLKWAPRRA 235 (271)
Q Consensus 199 ~~dg~i~iwd~~~~~~~~~~~~~~-~~v~~~~~s~~~~ 235 (271)
...+.|..+|..+++.+..+.... ....++++.|++.
T Consensus 226 ~~~~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 226 WKTNSVIAMDLAISKEMDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp TTTTEEEEEETTTTEEEEEECCSSCCCCCCEEEECSCC
T ss_pred CCCCeEEEEeCCCCCceEEEccccccccceeeecCccC
Confidence 456899999999999988886433 2467888888864
No 243
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.07 E-value=3.4e-08 Score=79.69 Aligned_cols=223 Identities=8% Similarity=0.001 Sum_probs=134.9
Q ss_pred eeEEeeecceeeEEEEeeccceeeEEEEEcccc---------cceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCc
Q 024185 12 QALLFARQNIILILLESLCGIYQCMIIEFFATS---------KGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLA 82 (271)
Q Consensus 12 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 82 (271)
+.+.++..++.+..++..++...-. +... ...+.......++. ++.++.++.+..+|.+++
T Consensus 54 ~~v~~~~~~g~v~a~d~~tG~~~W~----~~~~~~~~~~~~~~~~~~~~~~~~~~~------v~v~~~~g~l~a~d~~tG 123 (376)
T 3q7m_A 54 NVVYAADRAGLVKALNADDGKEIWS----VSLAEKDGWFSKEPALLSGGVTVSGGH------VYIGSEKAQVYALNTSDG 123 (376)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEE----EECCC---CCSCCCCCEEEEEEEETTE------EEEEETTSEEEEEETTTC
T ss_pred CEEEEEcCCCeEEEEEccCCceeee----ecCccccccccccCcccccCceEeCCE------EEEEcCCCEEEEEECCCC
Confidence 4455566677888888776632211 2211 12222222223333 446778899999999999
Q ss_pred ceeEEEecCC-cc-eEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcceEEEecCCccce-----EEEEEcCCCcEEEEEe
Q 024185 83 SFQGILRLRG-RP-TVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEV-----CDIKFSNDGKSMLLTT 155 (271)
Q Consensus 83 ~~~~~~~~~~-~~-~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v-----~~~~~s~~~~~l~~~~ 155 (271)
+.+....... .. ..... +..+++++.++.+..+|.++++. ........... ...... +..+++++
T Consensus 124 ~~~W~~~~~~~~~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~----~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~ 195 (376)
T 3q7m_A 124 TVAWQTKVAGEALSRPVVS--DGLVLIHTSNGQLQALNEADGAV----KWTVNLDMPSLSLRGESAPTTA--FGAAVVGG 195 (376)
T ss_dssp CEEEEEECSSCCCSCCEEE--TTEEEEECTTSEEEEEETTTCCE----EEEEECCC-----CCCCCCEEE--TTEEEECC
T ss_pred CEEEEEeCCCceEcCCEEE--CCEEEEEcCCCeEEEEECCCCcE----EEEEeCCCCceeecCCCCcEEE--CCEEEEEc
Confidence 9887776543 11 12222 45788888899999999998875 33332211110 111222 34677888
Q ss_pred cCCeEEEEECCCCeEEEEeecCCCCCc-----eeeEEECC--CCCEEEEecCCCcEEEEEcCCceeEEEecCCcceeEEE
Q 024185 156 TNNNIYVLDAYGGEKRCGFSLEPSPNT-----NTEATFTP--DGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACL 228 (271)
Q Consensus 156 ~d~~i~~~d~~~~~~~~~~~~~~~~~~-----v~~~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~ 228 (271)
.++.+..+|..+++.+........... +..+.-.| .+..++.++.++.+..+|.++++.+...... ....+
T Consensus 196 ~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~--~~~~~ 273 (376)
T 3q7m_A 196 DNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELG--SVNDF 273 (376)
T ss_dssp TTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECCC--CEEEE
T ss_pred CCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccCC--CCCCc
Confidence 899999999999998877654321100 00000111 2456777888999999999999988776532 23444
Q ss_pred EEecCCcEEEEeC-CeEEEEcCCCCCCC
Q 024185 229 KWAPRRAMFVAAS-SVLSFWIPNPSSNS 255 (271)
Q Consensus 229 ~~s~~~~~l~~~~-~~v~iw~~~~~~~~ 255 (271)
... ++.+++... +.+..+|..+++..
T Consensus 274 ~~~-~~~l~~~~~~g~l~~~d~~tG~~~ 300 (376)
T 3q7m_A 274 IVD-GNRIYLVDQNDRVMALTIDGGVTL 300 (376)
T ss_dssp EEE-TTEEEEEETTCCEEEEETTTCCEE
T ss_pred eEE-CCEEEEEcCCCeEEEEECCCCcEE
Confidence 443 444444444 78999999988764
No 244
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.07 E-value=6.5e-08 Score=73.60 Aligned_cols=168 Identities=7% Similarity=0.006 Sum_probs=114.1
Q ss_pred cceeEEEecCCc---ceEEEcCCCCEEEEEec--CCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEe-
Q 024185 82 ASFQGILRLRGR---PTVAFDQQGLVFAVAME--AGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTT- 155 (271)
Q Consensus 82 ~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~- 155 (271)
.+.+.+++.... ..++|++++..+++.+. ++.|.++|+.+++. .....+..+. ....+++. ++.|+.+.
T Consensus 9 ~~vv~~~p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v--~~~i~l~~~~-fgeGi~~~--g~~lyv~t~ 83 (266)
T 2iwa_A 9 VEVLNEFPHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKV--ENIHKMDDSY-FGEGLTLL--NEKLYQVVW 83 (266)
T ss_dssp EEEEEEEECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCE--EEEEECCTTC-CEEEEEEE--TTEEEEEET
T ss_pred ceEEEEEECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCE--EEEEecCCCc-ceEEEEEe--CCEEEEEEe
Confidence 345566654432 34999998644444333 57999999999885 3333343321 22344554 45565554
Q ss_pred cCCeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCCceeEEEecCCc--c---eeEEEEE
Q 024185 156 TNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNI--G---VVACLKW 230 (271)
Q Consensus 156 ~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~--~---~v~~~~~ 230 (271)
.++.+.++|..+.+.+.++... .+. ...+++||+.++.+..++.|.++|..+.+.+..+.-.. . ..+.+.|
T Consensus 84 ~~~~v~viD~~t~~v~~~i~~g-~~~---g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~ 159 (266)
T 2iwa_A 84 LKNIGFIYDRRTLSNIKNFTHQ-MKD---GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEY 159 (266)
T ss_dssp TCSEEEEEETTTTEEEEEEECC-SSS---CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEE
T ss_pred cCCEEEEEECCCCcEEEEEECC-CCC---eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEE
Confidence 5889999999999999988654 111 14466788877777778899999999998888775321 1 3678888
Q ss_pred ecCCcEEEEeC--CeEEEEcCCCCCCCcCCC
Q 024185 231 APRRAMFVAAS--SVLSFWIPNPSSNSTDES 259 (271)
Q Consensus 231 s~~~~~l~~~~--~~v~iw~~~~~~~~~~~~ 259 (271)
. +|++.+... +.|.+-|+.+++......
T Consensus 160 ~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~ 189 (266)
T 2iwa_A 160 I-NGEVWANIWQTDCIARISAKDGTLLGWIL 189 (266)
T ss_dssp E-TTEEEEEETTSSEEEEEETTTCCEEEEEE
T ss_pred E-CCEEEEecCCCCeEEEEECCCCcEEEEEE
Confidence 8 776665553 889999999998766554
No 245
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.06 E-value=6e-08 Score=84.19 Aligned_cols=234 Identities=12% Similarity=0.038 Sum_probs=145.8
Q ss_pred eeEEeeecceeeEEEEeeccceeeEEEEEccccc----ceEEeeEEecCCchhhhhhhhhhc-----cCceEEEEEecCc
Q 024185 12 QALLFARQNIILILLESLCGIYQCMIIEFFATSK----GIRRGLFLSACLQLMIALCLVLLT-----TALEYGIFVLMLA 82 (271)
Q Consensus 12 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~v~~~~~s~~~~~~~~~~l~s~~-----~dg~i~iwd~~~~ 82 (271)
..++++..++.+..++..+|...-. +.... ..+...-.-.++.. ++..+ .+|.|+.+|.++|
T Consensus 118 ~~v~v~~~dg~l~alD~~tG~~~W~----~~~~~~~~~~~~~~~P~v~~~~v-----~vg~~~~~~~~~g~v~a~D~~tG 188 (668)
T 1kv9_A 118 DKVYVGTLDGRLIALDAKTGKAIWS----QQTTDPAKPYSITGAPRVVKGKV-----IIGNGGAEYGVRGFVSAYDADTG 188 (668)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEE----EECSCTTSSCBCCSCCEEETTEE-----EECCBCTTTCCBCEEEEEETTTC
T ss_pred CEEEEEcCCCEEEEEECCCCCEeee----eccCCCCCcceecCCCEEECCEE-----EEeCCCCCcCCCCEEEEEECCCC
Confidence 4566667788888888877743222 22110 11111001113333 12221 3689999999999
Q ss_pred ceeEEEecC---C-----------------------------c-ceEEEcCCCCEEEEEecCC-----------------
Q 024185 83 SFQGILRLR---G-----------------------------R-PTVAFDQQGLVFAVAMEAG----------------- 112 (271)
Q Consensus 83 ~~~~~~~~~---~-----------------------------~-~~~~~~~~~~~l~~~~~d~----------------- 112 (271)
+.+..+... . . ..++++|+...++.++.++
T Consensus 189 ~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~ 268 (668)
T 1kv9_A 189 KLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLY 268 (668)
T ss_dssp CEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTT
T ss_pred cEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCcee
Confidence 988877531 0 0 1268888888888887665
Q ss_pred --eEEEEeCCCCCCCcceEEEec--CCc-------cceEEEEEcCCCc---EEEEEecCCeEEEEECCCCeEEEEeecCC
Q 024185 113 --AIKLFDSRSYDKGPFDTFLVG--GDT-------AEVCDIKFSNDGK---SMLLTTTNNNIYVLDAYGGEKRCGFSLEP 178 (271)
Q Consensus 113 --~i~i~d~~~~~~~~~~~~~~~--~~~-------~~v~~~~~s~~~~---~l~~~~~d~~i~~~d~~~~~~~~~~~~~~ 178 (271)
.|..+|.++++. ...+. .|. .+.....+..+|+ .++.++.+|.++++|.++|+.+.......
T Consensus 269 ~~~v~AlD~~tG~~----~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~ 344 (668)
T 1kv9_A 269 LSSILAIRPDTGKL----AWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGK 344 (668)
T ss_dssp TTEEEEECTTTCCE----EEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSC
T ss_pred eeeEEEEcCCCCce----eeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccc
Confidence 499999999986 33332 222 2222223334665 68888999999999999999875433221
Q ss_pred CC----------C------------------------ceeeEEECCCCCEEEEe--------------------------
Q 024185 179 SP----------N------------------------TNTEATFTPDGQYVVSG-------------------------- 198 (271)
Q Consensus 179 ~~----------~------------------------~v~~~~~~~~~~~l~~~-------------------------- 198 (271)
.+ . .-..++++|+...++..
T Consensus 345 ~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~ 424 (668)
T 1kv9_A 345 VTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAG 424 (668)
T ss_dssp CCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSC
T ss_pred cccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCcc
Confidence 00 0 00126778876665531
Q ss_pred ----------cCCCcEEEEEcCCceeEEEecCCcceeEEEEEecCCcEEEEeC--CeEEEEcCCCCCCCcCCC
Q 024185 199 ----------SGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNPSSNSTDES 259 (271)
Q Consensus 199 ----------~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~~v~iw~~~~~~~~~~~~ 259 (271)
..+|.|..||+.+++.+.+.+.+. +.....+...+.+++.++ +.++.||.++++.+-...
T Consensus 425 ~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~-~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~ 496 (668)
T 1kv9_A 425 FADATDVPAAVVSGALLAWDPVKQKAAWKVPYPT-HWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFE 496 (668)
T ss_dssp GGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred ccccCCCCCCCccceEEEEeCCCCcEEEEccCCC-CCcCceeEeCCCEEEEECCcccchhhhhhcChhheEec
Confidence 124789999999999988775332 233344455677777776 889999999998765543
No 246
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.04 E-value=4.2e-09 Score=84.39 Aligned_cols=87 Identities=14% Similarity=0.154 Sum_probs=67.9
Q ss_pred EEEcCCCcEEEEEec-C--------CeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCE-EEEec-CCCcEEEEEcC
Q 024185 142 IKFSNDGKSMLLTTT-N--------NNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQY-VVSGS-GDGTLHAWNIN 210 (271)
Q Consensus 142 ~~~s~~~~~l~~~~~-d--------~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~-~dg~i~iwd~~ 210 (271)
++++||++.++++.. . +.+.++|+.+.+.+.++..... ...+.|+|||++ +++.. .++.|.++|+.
T Consensus 269 v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~~---p~gi~~s~Dg~~l~va~~~~~~~VsVID~~ 345 (368)
T 1mda_H 269 VAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGHD---SDAIIAAQDGASDNYANSAGTEVLDIYDAA 345 (368)
T ss_dssp EEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEEE---ECEEEECCSSSCEEEEEETTTTEEEEEESS
T ss_pred eEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCCC---cceEEECCCCCEEEEEccCCCCeEEEEECC
Confidence 689999998887643 2 3567999999999888876543 677999999984 45555 48999999999
Q ss_pred CceeEEEecCCcceeEEEEEec
Q 024185 211 TRNEVACWNGNIGVVACLKWAP 232 (271)
Q Consensus 211 ~~~~~~~~~~~~~~v~~~~~s~ 232 (271)
+++.+.+++.... ...+++.+
T Consensus 346 t~kvv~~I~vg~~-P~~i~~~~ 366 (368)
T 1mda_H 346 SDQDQSSVELDKG-PESLSVQN 366 (368)
T ss_dssp SCEEEEECCCCSC-CCEEECCC
T ss_pred CCcEEEEEECCCC-CCEEEeec
Confidence 9999999976544 35666654
No 247
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.02 E-value=6.4e-08 Score=72.90 Aligned_cols=165 Identities=13% Similarity=0.110 Sum_probs=111.5
Q ss_pred eeEEEecCCc---ceEEEcCCCCEEEEEecCC--eEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEe-cC
Q 024185 84 FQGILRLRGR---PTVAFDQQGLVFAVAMEAG--AIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTT-TN 157 (271)
Q Consensus 84 ~~~~~~~~~~---~~~~~~~~~~~l~~~~~d~--~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d 157 (271)
.+++++.... ..+.|+ ++.++.+.+.+| .|+.+|+++++. .....+.. ........++++.|+... .+
T Consensus 33 vv~~~phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv--~~~~~l~~---~~FgeGit~~g~~ly~ltw~~ 106 (262)
T 3nol_A 33 IVHSYPHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKT--LQQIELGK---RYFGEGISDWKDKIVGLTWKN 106 (262)
T ss_dssp EEEEEECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCE--EEEEECCT---TCCEEEEEEETTEEEEEESSS
T ss_pred EEEEecCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcE--EEEEecCC---ccceeEEEEeCCEEEEEEeeC
Confidence 4556644332 238888 666666666665 899999999886 33333332 222222333455565554 58
Q ss_pred CeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCCceeEEEecCC--c---ceeEEEEEec
Q 024185 158 NNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGN--I---GVVACLKWAP 232 (271)
Q Consensus 158 ~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~--~---~~v~~~~~s~ 232 (271)
+.+.+||..+.+.+.++...... ..+++|++.|+.+..++.|.++|..+.+.+..+.-. . ..++.+.|.
T Consensus 107 ~~v~v~D~~t~~~~~ti~~~~eG-----~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~- 180 (262)
T 3nol_A 107 GLGFVWNIRNLRQVRSFNYDGEG-----WGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV- 180 (262)
T ss_dssp SEEEEEETTTCCEEEEEECSSCC-----CCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-
T ss_pred CEEEEEECccCcEEEEEECCCCc-----eEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-
Confidence 89999999999999998865432 233467777777776788999999999988877542 2 234568887
Q ss_pred CCcEEEEeC--CeEEEEcCCCCCCCcCCCC
Q 024185 233 RRAMFVAAS--SVLSFWIPNPSSNSTDEST 260 (271)
Q Consensus 233 ~~~~l~~~~--~~v~iw~~~~~~~~~~~~~ 260 (271)
+|++.+..- +.|.+.|.++++.......
T Consensus 181 ~G~lyan~w~~~~I~vIDp~tG~V~~~Id~ 210 (262)
T 3nol_A 181 DGEIFANVWQTNKIVRIDPETGKVTGIIDL 210 (262)
T ss_dssp TTEEEEEETTSSEEEEECTTTCBEEEEEEC
T ss_pred CCEEEEEEccCCeEEEEECCCCcEEEEEEC
Confidence 777665553 7899999999988665554
No 248
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.99 E-value=8.5e-08 Score=72.27 Aligned_cols=164 Identities=11% Similarity=0.008 Sum_probs=112.0
Q ss_pred ceeEEEecCCcc---eEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEE-ecCC
Q 024185 83 SFQGILRLRGRP---TVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLT-TTNN 158 (271)
Q Consensus 83 ~~~~~~~~~~~~---~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~d~ 158 (271)
+.+++++..... .+.|+ ++.++.+.+.+|.|+.+|+++++. .... +... ..-..+++ +++.|+.. -.++
T Consensus 44 ~Vv~~~phd~~~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv--~~~~-l~~~-~FgeGit~--~g~~Ly~ltw~~~ 116 (268)
T 3nok_A 44 HIIREYPHATNAFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQP--VWME-RLGN-IFAEGLAS--DGERLYQLTWTEG 116 (268)
T ss_dssp EEEEEEECCTTCCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSC--SEEE-ECTT-CCEEEEEE--CSSCEEEEESSSC
T ss_pred EEEEEEcCCCccccceEEEE-CCEEEEEcCCCCEEEEEECCCCcE--EeEE-CCCC-cceeEEEE--eCCEEEEEEccCC
Confidence 445556443322 37786 355666667788999999999986 3344 4432 11123444 34445444 4589
Q ss_pred eEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCCceeEEEecC--Ccc---eeEEEEEecC
Q 024185 159 NIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNG--NIG---VVACLKWAPR 233 (271)
Q Consensus 159 ~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~--~~~---~v~~~~~s~~ 233 (271)
.+.+||..+.+.+.++...... ..+++|++.|+.+..++.|.++|..+.+.+.++.- +.. .++.+.|. +
T Consensus 117 ~v~V~D~~Tl~~~~ti~~~~eG-----wGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-d 190 (268)
T 3nok_A 117 LLFTWSGMPPQRERTTRYSGEG-----WGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-N 190 (268)
T ss_dssp EEEEEETTTTEEEEEEECSSCC-----CCEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-T
T ss_pred EEEEEECCcCcEEEEEeCCCce-----eEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-C
Confidence 9999999999999998864432 22336788888777788999999999998887743 222 34678887 7
Q ss_pred CcEEEEeC--CeEEEEcCCCCCCCcCCC
Q 024185 234 RAMFVAAS--SVLSFWIPNPSSNSTDES 259 (271)
Q Consensus 234 ~~~l~~~~--~~v~iw~~~~~~~~~~~~ 259 (271)
|++.+..- +.|.+-|.++++......
T Consensus 191 G~lyanvw~s~~I~vIDp~TG~V~~~Id 218 (268)
T 3nok_A 191 GVIYANIWHSSDVLEIDPATGTVVGVID 218 (268)
T ss_dssp TEEEEEETTCSEEEEECTTTCBEEEEEE
T ss_pred CEEEEEECCCCeEEEEeCCCCcEEEEEE
Confidence 77665553 789999999998766554
No 249
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.97 E-value=1.4e-06 Score=65.91 Aligned_cols=205 Identities=8% Similarity=0.039 Sum_probs=132.4
Q ss_pred EEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEecC---CcceEEEcCCCCEEEEEecCCeEE
Q 024185 39 EFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILRLR---GRPTVAFDQQGLVFAVAMEAGAIK 115 (271)
Q Consensus 39 ~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~d~~i~ 115 (271)
+.+.+-.+.+..++++|++..+ ++....++.|...|.. ++.++.+... ....+++.+++.++++.-.++.+.
T Consensus 20 ~~l~g~~~~lSGla~~~~~~~L----~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~ 94 (255)
T 3qqz_A 20 KEIAGITNNISSLTWSAQSNTL----FSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIY 94 (255)
T ss_dssp EECTTCCSCEEEEEEETTTTEE----EEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEE
T ss_pred eECCCcccCcceeEEeCCCCEE----EEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEE
Confidence 3566777789999999987653 4456778999999997 8888877543 344589988888766665678899
Q ss_pred EEeCCCCCC-CcceEEEec----CCccceEEEEEcCCCcEEEEEecCCeEEEEECC---CCeEEEEee-----cCCCCCc
Q 024185 116 LFDSRSYDK-GPFDTFLVG----GDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAY---GGEKRCGFS-----LEPSPNT 182 (271)
Q Consensus 116 i~d~~~~~~-~~~~~~~~~----~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~---~~~~~~~~~-----~~~~~~~ 182 (271)
++++..... .......+. ........++|+|+++.|+++.......+|... ..+.+..+. .......
T Consensus 95 ~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d 174 (255)
T 3qqz_A 95 VISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDD 174 (255)
T ss_dssp EEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSC
T ss_pred EEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCC
Confidence 998866542 011222211 234557899999998888877765444555443 111122221 1111123
Q ss_pred eeeEEECCCCC-EEEEecCCCcEEEEEcCCceeEEEecCCc---------ceeEEEEEecCCcEEEEeC-CeEEEEcC
Q 024185 183 NTEATFTPDGQ-YVVSGSGDGTLHAWNINTRNEVACWNGNI---------GVVACLKWAPRRAMFVAAS-SVLSFWIP 249 (271)
Q Consensus 183 v~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~---------~~v~~~~~s~~~~~l~~~~-~~v~iw~~ 249 (271)
..+++++|... +++....++.+..+|.. ++.+..+.-.. .....++|.|+|++.+++- +-++.|..
T Consensus 175 ~S~l~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~n~~y~f~~ 251 (255)
T 3qqz_A 175 VSGAEFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEPNRFYRFTP 251 (255)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEETTTEEEEEEC
T ss_pred ceeEEEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcCCceEEEEEe
Confidence 67799999754 55556667889999965 55555442211 1458999999999777765 65666644
No 250
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.96 E-value=2.8e-07 Score=78.51 Aligned_cols=236 Identities=13% Similarity=0.033 Sum_probs=141.0
Q ss_pred eeEEeeecceeeEEEEeeccceeeEEEEEcccccc--eEE-eeEEecCCchhhhhhhhhhc-----cCceEEEEEecCcc
Q 024185 12 QALLFARQNIILILLESLCGIYQCMIIEFFATSKG--IRR-GLFLSACLQLMIALCLVLLT-----TALEYGIFVLMLAS 83 (271)
Q Consensus 12 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~-~~~~s~~~~~~~~~~l~s~~-----~dg~i~iwd~~~~~ 83 (271)
..++++..++.+..++..++...-.. ....+.. .+. .... .++.. ++... .++.|+.+|.++|+
T Consensus 116 ~~v~v~~~dg~l~alD~~tG~~~W~~--~~~~~~~~~~~~~~P~v-~~g~v-----~vg~~~~~~~~~g~v~a~D~~tG~ 187 (571)
T 2ad6_A 116 GQIVKKQANGHLLALDAKTGKINWEV--EVCDPKVGSTLTQAPFV-AKDTV-----LMGCSGAELGVRGAVNAFDLKTGE 187 (571)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEE--ECCCGGGTCBCCSCCEE-ETTEE-----EEECBCGGGTCCCEEEEEETTTCC
T ss_pred CEEEEEeCCCEEEEEECCCCCEEEEe--cCCCCCccceeccCCEE-ECCEE-----EEEecCCccCCCCEEEEEECCCCc
Confidence 45566666788888888777332110 1111110 111 1111 13433 22222 27899999999999
Q ss_pred eeEEEecCCc----------------------------------------ceEEEcCCCCEEEEEecC------------
Q 024185 84 FQGILRLRGR----------------------------------------PTVAFDQQGLVFAVAMEA------------ 111 (271)
Q Consensus 84 ~~~~~~~~~~----------------------------------------~~~~~~~~~~~l~~~~~d------------ 111 (271)
.+..+..... ..+++.++...++.+..+
T Consensus 188 ~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd 267 (571)
T 2ad6_A 188 LKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGD 267 (571)
T ss_dssp EEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSC
T ss_pred EEEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCC
Confidence 8877754311 125677777777776532
Q ss_pred ----CeEEEEeCCCCCCCcceEEEecCCc--------cceEEEEEcCCCc---EEEEEecCCeEEEEECCCCeEEEEeec
Q 024185 112 ----GAIKLFDSRSYDKGPFDTFLVGGDT--------AEVCDIKFSNDGK---SMLLTTTNNNIYVLDAYGGEKRCGFSL 176 (271)
Q Consensus 112 ----~~i~i~d~~~~~~~~~~~~~~~~~~--------~~v~~~~~s~~~~---~l~~~~~d~~i~~~d~~~~~~~~~~~~ 176 (271)
+.|..+|.++++. .-.+....|. .++. +...++|+ .++.++.+|.++++|..+++.+..+..
T Consensus 268 ~~y~~~v~Ald~~tG~~--~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~ 344 (571)
T 2ad6_A 268 NKWTMTIWGRDLDTGMA--KWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKV 344 (571)
T ss_dssp CTTTTEEEEEETTTCCE--EEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEES
T ss_pred ceeEEEEEEEecCCCcE--EEEecCCCCcccccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecc
Confidence 3699999999886 2122222221 1121 22334774 567788899999999999998876653
Q ss_pred CCCC-----------Cce--------------------------eeEEECCCCCEEEEec--------------------
Q 024185 177 EPSP-----------NTN--------------------------TEATFTPDGQYVVSGS-------------------- 199 (271)
Q Consensus 177 ~~~~-----------~~v--------------------------~~~~~~~~~~~l~~~~-------------------- 199 (271)
.... ..+ ..++++|+...++...
T Consensus 345 ~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~ 424 (571)
T 2ad6_A 345 DPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFF 424 (571)
T ss_dssp STTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCC
T ss_pred cCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCcc
Confidence 3200 001 2357888877776543
Q ss_pred -----------------CCCcEEEEEcCCceeEEEecCCcceeEEEEEecCCcEEEEeC--CeEEEEcCCCCCCCcCCC
Q 024185 200 -----------------GDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNPSSNSTDES 259 (271)
Q Consensus 200 -----------------~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~~v~iw~~~~~~~~~~~~ 259 (271)
.+|.+..||+.+++.+.+++.. ..+.+......+..++.++ +.++.||.++++.+-..+
T Consensus 425 ~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~-~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~ 502 (571)
T 2ad6_A 425 VGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEK-FAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFK 502 (571)
T ss_dssp CCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEES-SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred ccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCC-CCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEe
Confidence 3578999999999988877532 2222323333445555565 889999999998765443
No 251
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.94 E-value=9.4e-08 Score=84.17 Aligned_cols=198 Identities=5% Similarity=-0.063 Sum_probs=110.5
Q ss_pred eEEeeEEe-cCCchhhhhhhhhhccCceEEEEEecCc-ceeE-EEecCCcceEEEcCCCCEEEEEecC-----CeEEEEe
Q 024185 47 IRRGLFLS-ACLQLMIALCLVLLTTALEYGIFVLMLA-SFQG-ILRLRGRPTVAFDQQGLVFAVAMEA-----GAIKLFD 118 (271)
Q Consensus 47 ~v~~~~~s-~~~~~~~~~~l~s~~~dg~i~iwd~~~~-~~~~-~~~~~~~~~~~~~~~~~~l~~~~~d-----~~i~i~d 118 (271)
.+....+| |||+.+++..--.|+....|+++|++++ +.+. .+.. ....++|+|||+.|+....+ ..|+.++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~-~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~ 253 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSG-TNGEIVWGPDHTSLFYVTKDETLRENKVWRHV 253 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEE-ECSCCEECSSTTEEEEEEECTTCCEEEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccC-ceeeEEEecCCCEEEEEEECCCCCCCEEEEEE
Confidence 56778999 9999854411112233346999999988 6321 1211 12348999999988877654 2688888
Q ss_pred CCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEec---CCeEEEEECCCCe-EE--EEeecCCCCCceeeEEECCCC
Q 024185 119 SRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTT---NNNIYVLDAYGGE-KR--CGFSLEPSPNTNTEATFTPDG 192 (271)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~---d~~i~~~d~~~~~-~~--~~~~~~~~~~~v~~~~~~~~~ 192 (271)
+.+++......+.. ........+.|||||++|+..+. ...|+++|+.++. .. ..+..... ....++.|+.++
T Consensus 254 lgt~~~~~~lv~~~-~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~-~~~~s~~~~~g~ 331 (751)
T 2xe4_A 254 MGKLQSEDVCLYEE-HNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREK-GVRYDVQMHGTS 331 (751)
T ss_dssp TTSCGGGCEEEEEC-CCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCT-TCCEEEEEETTT
T ss_pred CCCCchhcEEEEec-CCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCC-CceEEEeeeeCC
Confidence 87654211112221 22234678899999999887653 4568899988752 12 33322211 223445544444
Q ss_pred CEEEEecCC----CcEEEEEcCCceeEEE-ecCCcc--eeEEEEEecCCcEEEEe-C--C--eEEEEcC
Q 024185 193 QYVVSGSGD----GTLHAWNINTRNEVAC-WNGNIG--VVACLKWAPRRAMFVAA-S--S--VLSFWIP 249 (271)
Q Consensus 193 ~~l~~~~~d----g~i~iwd~~~~~~~~~-~~~~~~--~v~~~~~s~~~~~l~~~-~--~--~v~iw~~ 249 (271)
.+++....+ ..|..+|+.++..... +-.+.. .+..+.+ ++..|+.. . + .+.++++
T Consensus 332 ~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~--~~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 332 HLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAV--RSNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp EEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEE--CSSEEEEEEEETTEEEEEEEEC
T ss_pred EEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEE--ECCEEEEEEEeCCEEEEEEEec
Confidence 444444433 3577777764222122 222322 3445544 45555444 2 4 4777775
No 252
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.92 E-value=6.2e-07 Score=70.74 Aligned_cols=192 Identities=8% Similarity=-0.021 Sum_probs=117.6
Q ss_pred EEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEec----------------------CCcceEEEcCCCCEE
Q 024185 48 RRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILRL----------------------RGRPTVAFDQQGLVF 105 (271)
Q Consensus 48 v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~l 105 (271)
...+++.+++.. +.++..++.|..||.++++.. .+.. .....+++.+++..|
T Consensus 21 p~~i~~d~~g~~-----l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l 94 (322)
T 2fp8_A 21 PNSFTFDSTNKG-----FYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQL 94 (322)
T ss_dssp CCCEECCTTCSS-----EEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEE
T ss_pred ceEEEEcCCCCE-----EEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCCCCcE
Confidence 345778888875 456677889999988765432 2221 123458898733446
Q ss_pred EEEecCCeEEEEeCCCCCCCcceEEEecC-CccceEEEEEcC-CCcEEEEEec-----------------CCeEEEEECC
Q 024185 106 AVAMEAGAIKLFDSRSYDKGPFDTFLVGG-DTAEVCDIKFSN-DGKSMLLTTT-----------------NNNIYVLDAY 166 (271)
Q Consensus 106 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~-~~~~v~~~~~s~-~~~~l~~~~~-----------------d~~i~~~d~~ 166 (271)
+++...+.+..+|..+++...+.. ...+ .......+++.+ +|+..++-.. ++.|..||..
T Consensus 95 ~v~d~~~~i~~~d~~~g~~~~~~~-~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~ 173 (322)
T 2fp8_A 95 YIVDCYYHLSVVGSEGGHATQLAT-SVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPS 173 (322)
T ss_dssp EEEETTTEEEEECTTCEECEEEES-EETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETT
T ss_pred EEEECCCCEEEEeCCCCEEEEecc-cCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCC
Confidence 666555668888877554311100 1111 113467899999 9976655432 3679999987
Q ss_pred CCeEEEEeecCCCCCceeeEEECCCCCEEEEe-cCCCcEEEEEcCCce--eEEEecCCcceeEEEEEecCCcEEEEeC--
Q 024185 167 GGEKRCGFSLEPSPNTNTEATFTPDGQYVVSG-SGDGTLHAWNINTRN--EVACWNGNIGVVACLKWAPRRAMFVAAS-- 241 (271)
Q Consensus 167 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~--~~~~~~~~~~~v~~~~~s~~~~~l~~~~-- 241 (271)
+++.......... ...++++|++++|+.+ ...+.|..+++.... ....+....+ ...+++.++|++.++..
T Consensus 174 ~~~~~~~~~~~~~---p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~ 249 (322)
T 2fp8_A 174 TKETTLLLKELHV---PGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEE 249 (322)
T ss_dssp TTEEEEEEEEESC---CCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEE
T ss_pred CCEEEEeccCCcc---CcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCc
Confidence 7765433222222 4558999999866655 556889999987421 1111111123 67899999998766653
Q ss_pred ----------CeEEEEcCC
Q 024185 242 ----------SVLSFWIPN 250 (271)
Q Consensus 242 ----------~~v~iw~~~ 250 (271)
+.|..+|..
T Consensus 250 ~~~~~~~~~~~~v~~~d~~ 268 (322)
T 2fp8_A 250 LDGNMHGRVDPKGIKFDEF 268 (322)
T ss_dssp TTSSTTSCEEEEEEEECTT
T ss_pred ccccccCCCccEEEEECCC
Confidence 347777764
No 253
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.89 E-value=1.2e-06 Score=74.85 Aligned_cols=234 Identities=12% Similarity=0.008 Sum_probs=139.0
Q ss_pred EEeeecceeeEEEEeeccceeeEEEEEccccc--ceEE-eeEEecCCchhhhhhhhhhc-----cCceEEEEEecCccee
Q 024185 14 LLFARQNIILILLESLCGIYQCMIIEFFATSK--GIRR-GLFLSACLQLMIALCLVLLT-----TALEYGIFVLMLASFQ 85 (271)
Q Consensus 14 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~-~~~~s~~~~~~~~~~l~s~~-----~dg~i~iwd~~~~~~~ 85 (271)
++++..++.+..++..+|...-.. ....+. ..+. ...+ .++.. ++.++ .+|.|+-+|.++|+.+
T Consensus 124 V~v~t~dg~l~AlDa~TG~~~W~~--~~~~~~~~~~~~ssP~v-~~g~V-----~vg~~g~e~g~~g~v~A~D~~TG~~~ 195 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAETGETVWKV--ENSDIKVGSTLTIAPYV-VKDKV-----IIGSSGAELGVRGYLTAYDVKTGEQV 195 (599)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEE--ECCCGGGTCBCCSCCEE-ETTEE-----EECCBCGGGTCCCEEEEEETTTCCEE
T ss_pred EEEEcCCCEEEEEECCCCCEEEee--cCCCCCccceeecCCEE-ECCEE-----EEEecccccCCCCeEEEEECCCCcEE
Confidence 666667888888888777332110 111110 0111 1111 13433 22222 4799999999999988
Q ss_pred EEEecCCc---------------------------------------c-eEEEcCCCCEEEEEecC--------------
Q 024185 86 GILRLRGR---------------------------------------P-TVAFDQQGLVFAVAMEA-------------- 111 (271)
Q Consensus 86 ~~~~~~~~---------------------------------------~-~~~~~~~~~~l~~~~~d-------------- 111 (271)
..+..... + .+++.++...++.+..+
T Consensus 196 W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~ 275 (599)
T 1w6s_A 196 WRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNK 275 (599)
T ss_dssp EEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCT
T ss_pred EEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCcc
Confidence 77754321 0 25667777888887655
Q ss_pred --CeEEEEeCCCCCCCcceEEEecCCc--------cceEEEEEc-CCC---cEEEEEecCCeEEEEECCCCeEEEEeecC
Q 024185 112 --GAIKLFDSRSYDKGPFDTFLVGGDT--------AEVCDIKFS-NDG---KSMLLTTTNNNIYVLDAYGGEKRCGFSLE 177 (271)
Q Consensus 112 --~~i~i~d~~~~~~~~~~~~~~~~~~--------~~v~~~~~s-~~~---~~l~~~~~d~~i~~~d~~~~~~~~~~~~~ 177 (271)
+.|..+|.++++. .-.+....|. .++. +... .+| +.++.++.+|.++++|.++|+.+......
T Consensus 276 y~~sv~Ald~~TG~~--~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~ 352 (599)
T 1w6s_A 276 WTMTIFGRDADTGEA--KFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLD 352 (599)
T ss_dssp TSSEEEEEETTTCCE--EEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESS
T ss_pred ccceEEEEeCCCCce--eeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEeeccccc
Confidence 3899999999886 2222232231 1121 2222 567 56777889999999999999988765432
Q ss_pred CC----------C-Cc--------------------------eeeEEECCCCCEEEEe----------------------
Q 024185 178 PS----------P-NT--------------------------NTEATFTPDGQYVVSG---------------------- 198 (271)
Q Consensus 178 ~~----------~-~~--------------------------v~~~~~~~~~~~l~~~---------------------- 198 (271)
.. . .. -..++++|+..++++.
T Consensus 353 ~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~ 432 (599)
T 1w6s_A 353 DTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFV 432 (599)
T ss_dssp TTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCC
T ss_pred CCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCccee
Confidence 10 0 00 1235677776655442
Q ss_pred -----------c------CCCcEEEEEcCCceeEEEecCCcceeEEEEEecCCcEEEEeC--CeEEEEcCCCCCCCcCCC
Q 024185 199 -----------S------GDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNPSSNSTDES 259 (271)
Q Consensus 199 -----------~------~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~~v~iw~~~~~~~~~~~~ 259 (271)
+ ..|.+..||+.+++.+.+.+.. .+...-.....+.+++.++ +.++.||.++++.+-..+
T Consensus 433 g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~-~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~ 511 (599)
T 1w6s_A 433 GATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKMER-FAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFK 511 (599)
T ss_dssp CEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEES-SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred cccceeccCCcCCcccCCCcCeEEEEECCCCCEEeEecCC-CCccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEee
Confidence 1 3478999999999988776421 1121111222455555565 889999999998765443
No 254
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.88 E-value=8.3e-07 Score=66.28 Aligned_cols=152 Identities=13% Similarity=0.098 Sum_probs=103.3
Q ss_pred EEEcCCCCEEEEEecC--CeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEE-EecCCeEEEEECCCCeEEE
Q 024185 96 VAFDQQGLVFAVAMEA--GAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLL-TTTNNNIYVLDAYGGEKRC 172 (271)
Q Consensus 96 ~~~~~~~~~l~~~~~d--~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~~d~~i~~~d~~~~~~~~ 172 (271)
+.|++ +.++.+.+.+ +.|+.+|+++++. .....+..+.- -..++.. ++.|+. .-.++.+.+||..+.+.+.
T Consensus 26 L~~~~-~~LyestG~~g~S~v~~vD~~tgkv--~~~~~l~~~~f-geGi~~~--~~~ly~ltw~~~~v~v~D~~tl~~~~ 99 (243)
T 3mbr_X 26 LFYLR-GHLYESTGETGRSSVRKVDLETGRI--LQRAEVPPPYF-GAGIVAW--RDRLIQLTWRNHEGFVYDLATLTPRA 99 (243)
T ss_dssp EEEET-TEEEEEECCTTSCEEEEEETTTCCE--EEEEECCTTCC-EEEEEEE--TTEEEEEESSSSEEEEEETTTTEEEE
T ss_pred EEEEC-CEEEEECCCCCCceEEEEECCCCCE--EEEEeCCCCcc-eeEEEEe--CCEEEEEEeeCCEEEEEECCcCcEEE
Confidence 88876 5545555554 4899999999886 33444433211 1223333 444544 4458999999999999999
Q ss_pred EeecCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCCceeEEEecCC--c---ceeEEEEEecCCcEEEEeC--CeEE
Q 024185 173 GFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGN--I---GVVACLKWAPRRAMFVAAS--SVLS 245 (271)
Q Consensus 173 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~--~---~~v~~~~~s~~~~~l~~~~--~~v~ 245 (271)
++...... ..++++++.|+.+..++.|.++|..+.+.+.++.-. . ..++.+.|. +|++.+..- +.|.
T Consensus 100 ti~~~~~G-----wglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~ 173 (243)
T 3mbr_X 100 RFRYPGEG-----WALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIA 173 (243)
T ss_dssp EEECSSCC-----CEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEE
T ss_pred EEeCCCCc-----eEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCeEE
Confidence 98865432 233456777777667889999999999988877532 1 235677776 677665552 7899
Q ss_pred EEcCCCCCCCcCCC
Q 024185 246 FWIPNPSSNSTDES 259 (271)
Q Consensus 246 iw~~~~~~~~~~~~ 259 (271)
+.|+++++......
T Consensus 174 vIDp~tG~V~~~id 187 (243)
T 3mbr_X 174 RIDPASGKVVAWID 187 (243)
T ss_dssp EECTTTCBEEEEEE
T ss_pred EEECCCCCEEEEEE
Confidence 99999998766554
No 255
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.87 E-value=1.9e-06 Score=73.46 Aligned_cols=236 Identities=11% Similarity=0.064 Sum_probs=139.5
Q ss_pred eeEEeeecceeeEEEEeeccceeeEEEEEccccc---ceEEeeEEecC---Cchhhhhhhhhhc------cCceEEEEEe
Q 024185 12 QALLFARQNIILILLESLCGIYQCMIIEFFATSK---GIRRGLFLSAC---LQLMIALCLVLLT------TALEYGIFVL 79 (271)
Q Consensus 12 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~v~~~~~s~~---~~~~~~~~l~s~~------~dg~i~iwd~ 79 (271)
..++++..++.+..++..+|...-.. ....+. .......+..+ ++.. ++.++ .++.|+-+|.
T Consensus 118 ~~v~~~t~dg~l~AlD~~TG~~~W~~--~~~~~~~~~~~~~sP~v~~~~~~G~~~----v~vg~~~~e~~~~g~v~alD~ 191 (582)
T 1flg_A 118 DKVFFGTLDASVVALNKNTGKVVWKK--KFADHGAGYTMTGAPTIVKDGKTGKVL----LIHGSSGDEFGVVGRLFARDP 191 (582)
T ss_dssp TEEEEEETTTEEEEEESSSCCEEEEE--ECSCGGGTCBCCSCCEEEECTTTCCEE----EEECCBCGGGCCBCEEEEECT
T ss_pred CEEEEEeCCCEEEEEECCCCCEEeee--cCCCCCcCcccccCCEEeCCCcCCcEE----EEEeccccccCCCCEEEEEEC
Confidence 45666677888888888877432111 111111 01111112222 2211 22332 3789999999
Q ss_pred cCcceeEEEecCC------------------------------------------c-ceEEEcCCCCEEEEEec------
Q 024185 80 MLASFQGILRLRG------------------------------------------R-PTVAFDQQGLVFAVAME------ 110 (271)
Q Consensus 80 ~~~~~~~~~~~~~------------------------------------------~-~~~~~~~~~~~l~~~~~------ 110 (271)
++|+.+...+... . ..++++|+...++.+..
T Consensus 192 ~tG~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~ 271 (582)
T 1flg_A 192 DTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWN 271 (582)
T ss_dssp TTCCEEEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSC
T ss_pred CCCCEEeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCccc
Confidence 9998877654321 0 12567777777777763
Q ss_pred --------------C----CeEEEEeCCCCCCCcceEEEe--cCCc--------cceEEEEEc-CCCc---EEEEEecCC
Q 024185 111 --------------A----GAIKLFDSRSYDKGPFDTFLV--GGDT--------AEVCDIKFS-NDGK---SMLLTTTNN 158 (271)
Q Consensus 111 --------------d----~~i~i~d~~~~~~~~~~~~~~--~~~~--------~~v~~~~~s-~~~~---~l~~~~~d~ 158 (271)
| +.|..+|..+++. ...+ ..|. .++. +... .+|+ .++.++.+|
T Consensus 272 ~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~----~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G 346 (582)
T 1flg_A 272 TWARTAKGGNPHDYDSLYTSGQVGVDPSSGEV----KWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNG 346 (582)
T ss_dssp GGGGSCTTSCSTTCCCTTCSEEEEECTTTCCE----EEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTS
T ss_pred CcccccCCCcccccCCcccceEEEEeCCCCCE----EEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCc
Confidence 2 5899999999986 3333 2232 1121 1222 4674 678889999
Q ss_pred eEEEEECCCCeEEEEeecCCCC-----------C--------------------------------ceeeEEECCCCCEE
Q 024185 159 NIYVLDAYGGEKRCGFSLEPSP-----------N--------------------------------TNTEATFTPDGQYV 195 (271)
Q Consensus 159 ~i~~~d~~~~~~~~~~~~~~~~-----------~--------------------------------~v~~~~~~~~~~~l 195 (271)
.++++|.++|+.+..+...... . .-..++++|+...+
T Consensus 347 ~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~ 426 (582)
T 1flg_A 347 FFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLF 426 (582)
T ss_dssp EEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCE
T ss_pred eEEEEECCCCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEE
Confidence 9999999999988765543200 0 00135667765555
Q ss_pred EEec---------------------------------CCCcEEEEEcCCceeEEEecCCcceeEEEEEecCCcEEEEeC-
Q 024185 196 VSGS---------------------------------GDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS- 241 (271)
Q Consensus 196 ~~~~---------------------------------~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~- 241 (271)
++.. .+|.|..||+.+++.+.+.+... ++..-.....+.+++.++
T Consensus 427 yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~g~~ 505 (582)
T 1flg_A 427 YVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHL-PLWAGVLATAGNLVFTGTG 505 (582)
T ss_dssp EEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESS-CCCSCCEEETTTEEEEECT
T ss_pred EEechhcceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCC-CCcccceEeCCCEEEEECC
Confidence 4422 25789999999999987765332 222212222355666666
Q ss_pred -CeEEEEcCCCCCCCcCCC
Q 024185 242 -SVLSFWIPNPSSNSTDES 259 (271)
Q Consensus 242 -~~v~iw~~~~~~~~~~~~ 259 (271)
+.++.||.++++.+-..+
T Consensus 506 dg~l~A~D~~tG~~lW~~~ 524 (582)
T 1flg_A 506 DGYFKAFDAKSGKELWKFQ 524 (582)
T ss_dssp TSEEEEEETTTCCEEEEEE
T ss_pred CCcEEEEECCCCCEEEEec
Confidence 889999999998765544
No 256
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.81 E-value=3.1e-06 Score=66.70 Aligned_cols=189 Identities=14% Similarity=0.089 Sum_probs=114.6
Q ss_pred eEEeeEEec-CCchhhhhhhhhhccCceEEEEEecCcceeEEEec-------CCcceEEEcC-CCCEEEEEec-------
Q 024185 47 IRRGLFLSA-CLQLMIALCLVLLTTALEYGIFVLMLASFQGILRL-------RGRPTVAFDQ-QGLVFAVAME------- 110 (271)
Q Consensus 47 ~v~~~~~s~-~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-------~~~~~~~~~~-~~~~l~~~~~------- 110 (271)
....+++.+ ++.. + .+...+.+..+|.+++.. ..+.. .....+++.+ +|+..++-..
T Consensus 81 ~p~gi~~~~~~g~l-----~-v~d~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~ 153 (322)
T 2fp8_A 81 RTYDISYNLQNNQL-----Y-IVDCYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRG 153 (322)
T ss_dssp CEEEEEEETTTTEE-----E-EEETTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTC
T ss_pred CCceEEEcCCCCcE-----E-EEECCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccc
Confidence 467788987 6665 2 233334478888765542 22211 1234589999 8876555432
Q ss_pred ----------CCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEE-ecCCeEEEEECCCCe--EEEEeecC
Q 024185 111 ----------AGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLT-TTNNNIYVLDAYGGE--KRCGFSLE 177 (271)
Q Consensus 111 ----------d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~d~~i~~~d~~~~~--~~~~~~~~ 177 (271)
++.|..+|..+++. . .+.........++++|+++.|+.+ ..++.|..|++.... ....+...
T Consensus 154 ~~~~~~~~~~~g~v~~~d~~~~~~----~-~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~ 228 (322)
T 2fp8_A 154 VQQIMDTSDKTGRLIKYDPSTKET----T-LLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKI 228 (322)
T ss_dssp HHHHHHHTCCCEEEEEEETTTTEE----E-EEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEEC
T ss_pred cceehcccCCCceEEEEeCCCCEE----E-EeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeC
Confidence 36788898876552 1 111112345678999999877666 456899999987421 11222211
Q ss_pred CCCCceeeEEECCCCCEEEEecC----------CCcEEEEEcCCceeEEEecCCc----ceeEEEEEecCCcEEEEeC--
Q 024185 178 PSPNTNTEATFTPDGQYVVSGSG----------DGTLHAWNINTRNEVACWNGNI----GVVACLKWAPRRAMFVAAS-- 241 (271)
Q Consensus 178 ~~~~~v~~~~~~~~~~~l~~~~~----------dg~i~iwd~~~~~~~~~~~~~~----~~v~~~~~s~~~~~l~~~~-- 241 (271)
+. ...++++++|++.++... .+.|..+|. .++.+..+.... ..++++++ .+++++++..
T Consensus 229 --~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~-~G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~ 303 (322)
T 2fp8_A 229 --PN-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDE-FGNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFH 303 (322)
T ss_dssp --SS-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECT-TSCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSC
T ss_pred --CC-CCCeEECCCCCEEEEecCcccccccCCCccEEEEECC-CCCEEEEEECCCCCccccceEEEE-eCCEEEEeecCC
Confidence 12 567899999997766544 467888886 477777664332 34666766 4666665543
Q ss_pred CeEEEEcCCCC
Q 024185 242 SVLSFWIPNPS 252 (271)
Q Consensus 242 ~~v~iw~~~~~ 252 (271)
+.|..+++...
T Consensus 304 ~~i~~~~~~~~ 314 (322)
T 2fp8_A 304 GSVGILVYDKK 314 (322)
T ss_dssp SEEEEEEC---
T ss_pred CceEEEecccc
Confidence 67999987643
No 257
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.80 E-value=2.5e-05 Score=63.21 Aligned_cols=200 Identities=10% Similarity=-0.057 Sum_probs=123.0
Q ss_pred ceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEec--CCcceEEEcCCCCEEEEE-ecCCeEEEEeCCCC
Q 024185 46 GIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILRL--RGRPTVAFDQQGLVFAVA-MEAGAIKLFDSRSY 122 (271)
Q Consensus 46 ~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~ 122 (271)
.....++|.+.+..+ +++-...+.|+.++++.......+.. .....+++.+.+..|+.+ ...+.|.+.++...
T Consensus 116 ~~~~gl~~d~~~~~l----y~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~ 191 (386)
T 3v65_B 116 ENAIALDFHHRRELV----FWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGA 191 (386)
T ss_dssp SCEEEEEEETTTTEE----EEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSC
T ss_pred CccEEEEEecCCCeE----EEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCC
Confidence 346678999765553 34556678899999876654333332 233458999866656555 45678988888754
Q ss_pred CCCcceEEEecCCccceEEEEEcCCCcEEEEEec-C-CeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEe-c
Q 024185 123 DKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTT-N-NNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSG-S 199 (271)
Q Consensus 123 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-d-~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~ 199 (271)
.. ...+.........+++.|.+..|+.+.. . +.|..+++.... ...+.. ........++++|++..|+.+ +
T Consensus 192 ~~----~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~-~~~~~~-~~~~~PnGlavd~~~~~lY~aD~ 265 (386)
T 3v65_B 192 HR----KVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG-RRIIAD-THLFWPNGLTIDYAGRRMYWVDA 265 (386)
T ss_dssp SC----EEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS-CEEEEC-SSCSCEEEEEEEGGGTEEEEEET
T ss_pred ce----EEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCC-cEEEEE-CCCCCeeeEEEeCCCCEEEEEEC
Confidence 43 2233333456789999997666655543 4 789888876433 222221 112336789999877766655 4
Q ss_pred CCCcEEEEEcCCceeEEEecCCcceeEEEEEecCCcEEEEeC--CeEEEEcCCCCCCCc
Q 024185 200 GDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNPSSNST 256 (271)
Q Consensus 200 ~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~~v~iw~~~~~~~~~ 256 (271)
..+.|..+|+........+........++++. ++.++++.. +.|..++..+++...
T Consensus 266 ~~~~I~~~d~dG~~~~~~~~~~~~~P~giav~-~~~ly~td~~~~~V~~~~~~~G~~~~ 323 (386)
T 3v65_B 266 KHHVIERANLDGSHRKAVISQGLPHPFAITVF-EDSLYWTDWHTKSINSANKFTGKNQE 323 (386)
T ss_dssp TTTEEEEECTTSCSCEEEECSSCSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCSCE
T ss_pred CCCEEEEEeCCCCeeEEEEECCCCCceEEEEE-CCEEEEeeCCCCeEEEEECCCCcceE
Confidence 46789999986443333333333445778883 444444443 778888865655443
No 258
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.78 E-value=1.8e-05 Score=62.15 Aligned_cols=180 Identities=8% Similarity=-0.022 Sum_probs=110.6
Q ss_pred cCceEEEEEecCcceeEEEecC-CcceEEEcCCCCEEEEE-ecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCC
Q 024185 70 TALEYGIFVLMLASFQGILRLR-GRPTVAFDQQGLVFAVA-MEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSND 147 (271)
Q Consensus 70 ~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 147 (271)
....|+..|+++.+....+... ....++|+++++.|+.+ ..++.|+.+++............+.........+++.+.
T Consensus 8 ~~~~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~ 87 (316)
T 1ijq_A 8 NRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI 87 (316)
T ss_dssp CBSSEEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETT
T ss_pred CCCeEEEEECCCcceEehhcCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeec
Confidence 3456888898877665555433 34559999877666655 456899999987621000012222222245678899875
Q ss_pred CcEEE-EEecCCeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEecC-C-CcEEEEEcCCceeEEEe-cCCcc
Q 024185 148 GKSML-LTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSG-D-GTLHAWNINTRNEVACW-NGNIG 223 (271)
Q Consensus 148 ~~~l~-~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d-g~i~iwd~~~~~~~~~~-~~~~~ 223 (271)
+..|+ +-...+.|.++|+........+.... .....++++|.+.+|+.+.. . +.|...++. +.....+ ...-.
T Consensus 88 ~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~--~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~d-G~~~~~~~~~~~~ 164 (316)
T 1ijq_A 88 HSNIYWTDSVLGTVSVADTKGVKRKTLFRENG--SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN-GVDIYSLVTENIQ 164 (316)
T ss_dssp TTEEEEEETTTTEEEEEETTSSSEEEEEECTT--CCEEEEEEETTTTEEEEEECSSSCEEEEEETT-SCCEEEEECSSCS
T ss_pred CCeEEEEECCCCEEEEEeCCCCceEEEEECCC--CCcceEEeCCCCCEEEEEccCCCCeEEEEcCC-CCCeEEEEECCCC
Confidence 55454 44567899999987543322232222 23678999997766665544 2 688888875 4433333 22334
Q ss_pred eeEEEEEecCCcEEEEeC---CeEEEEcCCCC
Q 024185 224 VVACLKWAPRRAMFVAAS---SVLSFWIPNPS 252 (271)
Q Consensus 224 ~v~~~~~s~~~~~l~~~~---~~v~iw~~~~~ 252 (271)
....++++|++..|..+. +.|..+|++..
T Consensus 165 ~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~ 196 (316)
T 1ijq_A 165 WPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 196 (316)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CceEEEEeccCCEEEEEECCCCeEEEEecCCC
Confidence 578999999877666664 67999998753
No 259
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.78 E-value=2.8e-05 Score=69.05 Aligned_cols=198 Identities=14% Similarity=0.059 Sum_probs=131.0
Q ss_pred cceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEe---------cCCcceEEEcCCCCEEEEEecCCeEE
Q 024185 45 KGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILR---------LRGRPTVAFDQQGLVFAVAMEAGAIK 115 (271)
Q Consensus 45 ~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~---------~~~~~~~~~~~~~~~l~~~~~d~~i~ 115 (271)
...+.++...++|.. ..|+.+ -+.+||..+++...... ...+.++...++|. |..|+.++-|.
T Consensus 262 ~~~i~~i~~d~~g~l------Wigt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWigt~~~Gl~ 333 (795)
T 4a2l_A 262 SNYIRSLAMDSQNRL------WIGTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGG-MWLGTYFGGLN 333 (795)
T ss_dssp CSBEEEEEECTTSCE------EEEESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSC-EEEEESSSCEE
T ss_pred CCeEEEEEEcCCCCE------EEEeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcC-EEEEECCCCeE
Confidence 356888888888875 234444 58889987766443221 12355577777777 66677777899
Q ss_pred EEeCCCCCCCcceEEEec-----CCccceEEEEEcCCCcEEEEEecCCeEEEEECCCCeEEEEeecC------CCCCcee
Q 024185 116 LFDSRSYDKGPFDTFLVG-----GDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLE------PSPNTNT 184 (271)
Q Consensus 116 i~d~~~~~~~~~~~~~~~-----~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~------~~~~~v~ 184 (271)
.|+..+... ...... -....|.++...++|. |..|+.++-|..||..+++........ -....|.
T Consensus 334 ~~~~~~~~~---~~~~~~~~~~~l~~~~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~ 409 (795)
T 4a2l_A 334 YYHPIRNRF---KNIRNIPYKNSLSDNVVSCIVEDKDKN-LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIK 409 (795)
T ss_dssp EECGGGGSS---EEECCCTTSSSCSCSSEEEEEECTTSC-EEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEE
T ss_pred EeCCCcccc---eEEcCCCCCCCCCCCeeEEEEECCCCC-EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEE
Confidence 998765542 111110 0235689999888887 667888877999998776544322111 1124588
Q ss_pred eEEECCCCCEEEEecCCCcEEEEEcCCceeEEEec----CCcceeEEEEEecCCcEEEEeCCeEEEEcCCCCCC
Q 024185 185 EATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWN----GNIGVVACLKWAPRRAMFVAASSVLSFWIPNPSSN 254 (271)
Q Consensus 185 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~----~~~~~v~~~~~s~~~~~l~~~~~~v~iw~~~~~~~ 254 (271)
++..+++|+.|..|+.++-+..+|..+++...-.. .....|.++...++|++.+...+.+..||..+++.
T Consensus 410 ~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~~Gl~~~~~~~~~~ 483 (795)
T 4a2l_A 410 AVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTLSALVRFNPEQRSF 483 (795)
T ss_dssp EEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEESSCEEEEETTTTEE
T ss_pred EEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEecCceeEEeCCCCeE
Confidence 88888899855666766679999988776443221 12456899999888987776666688999877654
No 260
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.77 E-value=1.6e-05 Score=70.64 Aligned_cols=227 Identities=10% Similarity=0.026 Sum_probs=143.4
Q ss_pred eeEEeeecceeeEEEEeeccceeeEEEEEc----ccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEE
Q 024185 12 QALLFARQNIILILLESLCGIYQCMIIEFF----ATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGI 87 (271)
Q Consensus 12 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 87 (271)
..+.+++.++.+..++...+... ..... ......|.++...++|.. ..|+.++-+..||..+++....
T Consensus 321 g~lWigt~~~Gl~~~~~~~~~~~--~~~~~~~~~~l~~~~V~~i~~d~~g~l------WiGt~~~Gl~~~~~~~~~~~~~ 392 (795)
T 4a2l_A 321 GGMWLGTYFGGLNYYHPIRNRFK--NIRNIPYKNSLSDNVVSCIVEDKDKNL------WIGTNDGGLNLYNPITQRFTSY 392 (795)
T ss_dssp SCEEEEESSSCEEEECGGGGSSE--EECCCTTSSSCSCSSEEEEEECTTSCE------EEEESSSCEEEECTTTCCEEEE
T ss_pred cCEEEEECCCCeEEeCCCcccce--EEcCCCCCCCCCCCeeEEEEECCCCCE------EEEECCCCeEEEcCCCCcEEEE
Confidence 45566665566666654433211 10000 112456888888888774 4567777799999877654332
Q ss_pred Ee----------cCCcceEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcceEEEec---CCccceEEEEEcCCCcEEEEE
Q 024185 88 LR----------LRGRPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVG---GDTAEVCDIKFSNDGKSMLLT 154 (271)
Q Consensus 88 ~~----------~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~---~~~~~v~~~~~s~~~~~l~~~ 154 (271)
.. ...+.++...++++.|.+|+.++-+..||..+++. ...... .....|.++...++|.. ..|
T Consensus 393 ~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~---~~~~~~~~~l~~~~v~~i~~d~~g~l-wig 468 (795)
T 4a2l_A 393 TLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQV---ENFNQRNSQLVNENVYAILPDGEGNL-WLG 468 (795)
T ss_dssp CCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCE---EEECTTTSCCSCSCEEEEEECSSSCE-EEE
T ss_pred ecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcE---EEeecCCCCcCCCeeEEEEECCCCCE-EEE
Confidence 21 22355677777887577788777899999887653 111110 12357899998888874 444
Q ss_pred ecCCeEEEEECCCCeEEEEeec----CCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCCceeEEEec-------CCcc
Q 024185 155 TTNNNIYVLDAYGGEKRCGFSL----EPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWN-------GNIG 223 (271)
Q Consensus 155 ~~d~~i~~~d~~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-------~~~~ 223 (271)
+.+ .+..||..+++....... ......|.++..+++|++.+... +-+..||..+++. .+. ....
T Consensus 469 t~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~--~Gl~~~~~~~~~~--~~~~~~~~~~l~~~ 543 (795)
T 4a2l_A 469 TLS-ALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE--EGLSVFKQEGLDI--QKASILPVSNVTKL 543 (795)
T ss_dssp ESS-CEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES--SCEEEEEEETTEE--EECCCSCSCGGGGS
T ss_pred ecC-ceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC--CceEEEeCCCCeE--EEecCCCCCCCCCC
Confidence 554 588999887765432211 11124588899999998666554 4588899877765 232 1234
Q ss_pred eeEEEEEecCCcEEEEeCCeEEEEcCCCCCCC
Q 024185 224 VVACLKWAPRRAMFVAASSVLSFWIPNPSSNS 255 (271)
Q Consensus 224 ~v~~~~~s~~~~~l~~~~~~v~iw~~~~~~~~ 255 (271)
.|.++...++|++.++..+.+..||..+++..
T Consensus 544 ~i~~i~~d~~g~lWigT~~Gl~~~d~~~~~~~ 575 (795)
T 4a2l_A 544 FTNCIYEASNGIIWVGTREGFYCFNEKDKQIK 575 (795)
T ss_dssp CEEEEEECTTSCEEEEESSCEEEEETTTTEEE
T ss_pred eeEEEEECCCCCEEEEeCCCceeECCCCCcEE
Confidence 68899999999977766667888888766543
No 261
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.74 E-value=2.4e-06 Score=74.21 Aligned_cols=164 Identities=12% Similarity=0.161 Sum_probs=106.5
Q ss_pred eEEEEEecCcceeEEEecC--C-------cc-e-EEEcCCCC---EEEEEecCCeEEEEeCCCCCCCcceEEEecC----
Q 024185 73 EYGIFVLMLASFQGILRLR--G-------RP-T-VAFDQQGL---VFAVAMEAGAIKLFDSRSYDKGPFDTFLVGG---- 134 (271)
Q Consensus 73 ~i~iwd~~~~~~~~~~~~~--~-------~~-~-~~~~~~~~---~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~---- 134 (271)
.|..+|.++|+.+..++.. . .+ . ..+..+|+ .++.++.+|.++++|..+++. +....+..
T Consensus 271 ~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~--l~~~~~~~~~w~ 348 (668)
T 1kv9_A 271 SILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKL--ISAEKFGKVTWA 348 (668)
T ss_dssp EEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCE--EEEEESSCCCSE
T ss_pred eEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCE--eccccccccccc
Confidence 4889999999998887642 1 11 1 22334665 688889999999999999885 11111100
Q ss_pred -----Cc-cc------------------------eEEEEEcCCCcEEEEEe-----------------------------
Q 024185 135 -----DT-AE------------------------VCDIKFSNDGKSMLLTT----------------------------- 155 (271)
Q Consensus 135 -----~~-~~------------------------v~~~~~s~~~~~l~~~~----------------------------- 155 (271)
.. .+ -..++++|+...++...
T Consensus 349 ~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 428 (668)
T 1kv9_A 349 EKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADA 428 (668)
T ss_dssp EEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGC
T ss_pred cccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCcccccc
Confidence 00 00 11267788766655421
Q ss_pred -------cCCeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCCceeEEEecCCccee-EE
Q 024185 156 -------TNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVV-AC 227 (271)
Q Consensus 156 -------~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v-~~ 227 (271)
.+|.|..||+.+++.+.+...... .....+...+.+++.++.||.++.||.++++.+..++...... .-
T Consensus 429 ~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~~---~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p 505 (668)
T 1kv9_A 429 TDVPAAVVSGALLAWDPVKQKAAWKVPYPTH---WNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAP 505 (668)
T ss_dssp CCCCGGGCEEEEEEEETTTTEEEEEEEESSS---CCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCC
T ss_pred CCCCCCCccceEEEEeCCCCcEEEEccCCCC---CcCceeEeCCCEEEEECCcccchhhhhhcChhheEecCCCCcccCc
Confidence 237899999999999887765432 2223444567789999999999999999999998886543211 23
Q ss_pred EEEecCCc-EEEEeC
Q 024185 228 LKWAPRRA-MFVAAS 241 (271)
Q Consensus 228 ~~~s~~~~-~l~~~~ 241 (271)
+.+..+|+ +++.++
T Consensus 506 ~~~~~~G~~yva~~~ 520 (668)
T 1kv9_A 506 MTFELAGRQYVAIMA 520 (668)
T ss_dssp EEEEETTEEEEEEEE
T ss_pred eEEEECCEEEEEEEe
Confidence 44456777 444443
No 262
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.73 E-value=5.4e-06 Score=65.16 Aligned_cols=200 Identities=12% Similarity=0.117 Sum_probs=123.8
Q ss_pred eeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEecCCcceEEEcC----CCCE--EEEE-ec---CCeEEEEeC
Q 024185 50 GLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILRLRGRPTVAFDQ----QGLV--FAVA-ME---AGAIKLFDS 119 (271)
Q Consensus 50 ~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~----~~~~--l~~~-~~---d~~i~i~d~ 119 (271)
.+..+|.....-. ++.....+-+.+||+ +|+.++.+.....+-+.+-| .|+. ++.+ .. +++|.+|++
T Consensus 30 avw~~~~dp~~s~--ii~t~k~~gL~Vydl-~G~~l~~~~~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~i 106 (355)
T 3amr_A 30 AIWLDPKTPQNSK--LITTNKKSGLVVYSL-DGKMLHSYNTGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAI 106 (355)
T ss_dssp EEECCSSCGGGCE--EEEEETTTEEEEEET-TSCEEEEECCSCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEE
T ss_pred cEecCCCCCCccE--EEEEcCCCCEEEEcC-CCcEEEEccCCCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEE
Confidence 4555664322111 445566778999999 89988888765444444444 3332 3333 33 578999976
Q ss_pred C--CCCCCcceEEE-----ecCCccceEEEEE--cCC-Cc-EEEEEecCCeEEEEECC-------CCeEEEEeecCCCCC
Q 024185 120 R--SYDKGPFDTFL-----VGGDTAEVCDIKF--SND-GK-SMLLTTTNNNIYVLDAY-------GGEKRCGFSLEPSPN 181 (271)
Q Consensus 120 ~--~~~~~~~~~~~-----~~~~~~~v~~~~~--s~~-~~-~l~~~~~d~~i~~~d~~-------~~~~~~~~~~~~~~~ 181 (271)
. +++. .... +......+..+++ +|. ++ ++++...+|.+..|++. +.+.++++....
T Consensus 107 Dp~~~~l---~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgs--- 180 (355)
T 3amr_A 107 DGKNGTL---QSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNS--- 180 (355)
T ss_dssp CTTTCCE---EECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSS---
T ss_pred CCCCCce---eeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCC---
Confidence 3 3331 1110 0011144566666 774 44 57778889999999982 346677776544
Q ss_pred ceeeEEECCCCCEEEEecCCCcEEEEEcC-----CceeEEEec-CC-cceeEEEEEe--cCCc-EEEEeC---CeEEEEc
Q 024185 182 TNTEATFTPDGQYVVSGSGDGTLHAWNIN-----TRNEVACWN-GN-IGVVACLKWA--PRRA-MFVAAS---SVLSFWI 248 (271)
Q Consensus 182 ~v~~~~~~~~~~~l~~~~~dg~i~iwd~~-----~~~~~~~~~-~~-~~~v~~~~~s--~~~~-~l~~~~---~~v~iw~ 248 (271)
.+..+..++....|+.+-++.-|..++.+ +++.+..+. ++ ...+..|+.. ++++ +|++++ +.+.+||
T Consensus 181 q~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vyd 260 (355)
T 3amr_A 181 QTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYD 260 (355)
T ss_dssp CEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEE
T ss_pred CcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEE
Confidence 37788999988899999998767777754 345555542 22 2368888884 4555 565555 6799999
Q ss_pred CC-CCCCCcCC
Q 024185 249 PN-PSSNSTDE 258 (271)
Q Consensus 249 ~~-~~~~~~~~ 258 (271)
.+ +.+.+..+
T Consensus 261 r~~~~~~vg~f 271 (355)
T 3amr_A 261 RQGKNKYVADF 271 (355)
T ss_dssp SSTTCCEEEEE
T ss_pred CCCCCcEEEEE
Confidence 96 44444333
No 263
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.72 E-value=5e-05 Score=60.53 Aligned_cols=199 Identities=10% Similarity=-0.054 Sum_probs=122.3
Q ss_pred ceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEec--CCcceEEEcCCCCEEEEE-ecCCeEEEEeCCCC
Q 024185 46 GIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILRL--RGRPTVAFDQQGLVFAVA-MEAGAIKLFDSRSY 122 (271)
Q Consensus 46 ~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~ 122 (271)
.....++|++.+..+ +++-...+.|+.++++.......+.. .....+++.+.+..|+.+ ...+.|.+.++...
T Consensus 73 ~~~~~l~~d~~~~~l----y~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~ 148 (349)
T 3v64_C 73 ENAIALDFHHRRELV----FWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGA 148 (349)
T ss_dssp SCEEEEEEETTTTEE----EEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CceEEEEEeccccEE----EEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCC
Confidence 346678999766553 33555678899899876654433332 234558999866655555 55678999998765
Q ss_pred CCCcceEEEecCCccceEEEEEcCCCcEEEEEe-cC-CeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEec-
Q 024185 123 DKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTT-TN-NNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGS- 199 (271)
Q Consensus 123 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d-~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~- 199 (271)
.. .............+++.|.+..|+.+. .. +.|..+++.... ...+.. ..-.....++++|++..|+.+.
T Consensus 149 ~~----~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~-~~~~~~-~~~~~PnGla~d~~~~~lY~aD~ 222 (349)
T 3v64_C 149 HR----KVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG-RRIIAD-THLFWPNGLTIDYAGRRMYWVDA 222 (349)
T ss_dssp SC----EEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS-CEESCC-SSCSCEEEEEEETTTTEEEEEET
T ss_pred ce----EEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCC-cEEEEE-CCCCCcceEEEeCCCCEEEEEEC
Confidence 43 333333345678999999665555544 34 789999876432 233321 1123467899998777666554
Q ss_pred CCCcEEEEEcCCceeEEEecCCcceeEEEEEecCCcEEEEeC--CeEEEEcCCCCCCC
Q 024185 200 GDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNPSSNS 255 (271)
Q Consensus 200 ~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~~v~iw~~~~~~~~ 255 (271)
..+.|..+|+........+........++++. ++.++++-. +.|..++..+++..
T Consensus 223 ~~~~I~~~~~dG~~~~~~~~~~~~~P~giav~-~~~ly~td~~~~~V~~~~~~~G~~~ 279 (349)
T 3v64_C 223 KHHVIERANLDGSHRKAVISQGLPHPFAITVF-EDSLYWTDWHTKSINSANKFTGKNQ 279 (349)
T ss_dssp TTTEEEEEETTSCSCEEEECSSCSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCSC
T ss_pred CCCEEEEEeCCCCceEEEEeCCCCCceEEEEE-CCEEEEecCCCCeEEEEEccCCCcc
Confidence 46789999986543333333333445778873 444444433 67888875555543
No 264
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.72 E-value=6.5e-06 Score=64.37 Aligned_cols=210 Identities=8% Similarity=-0.001 Sum_probs=119.2
Q ss_pred eeEEeee-cceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhc-cC-ceEEEEEecCcceeEEE
Q 024185 12 QALLFAR-QNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLT-TA-LEYGIFVLMLASFQGIL 88 (271)
Q Consensus 12 ~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~-~d-g~i~iwd~~~~~~~~~~ 88 (271)
..++++. .++.+..++...+. ...+. ..+....+++.++++. +++.. .+ ..|..+|..+++.....
T Consensus 43 g~lyv~d~~~~~I~~~d~~g~~-----~~~~~-~~~~p~gia~~~dG~l-----~vad~~~~~~~v~~~d~~~g~~~~~~ 111 (306)
T 2p4o_A 43 GTIFVTNHEVGEIVSITPDGNQ-----QIHAT-VEGKVSGLAFTSNGDL-----VATGWNADSIPVVSLVKSDGTVETLL 111 (306)
T ss_dssp SCEEEEETTTTEEEEECTTCCE-----EEEEE-CSSEEEEEEECTTSCE-----EEEEECTTSCEEEEEECTTSCEEEEE
T ss_pred CCEEEEeCCCCeEEEECCCCce-----EEEEe-CCCCceeEEEcCCCcE-----EEEeccCCcceEEEEcCCCCeEEEEE
Confidence 3444443 45666666543321 11122 2346778999999986 33332 22 24666777777654333
Q ss_pred ecCC---cceEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcceEE---------EecCCccceEEEEEcCCCcEEEEEe-
Q 024185 89 RLRG---RPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTF---------LVGGDTAEVCDIKFSNDGKSMLLTT- 155 (271)
Q Consensus 89 ~~~~---~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~---------~~~~~~~~v~~~~~s~~~~~l~~~~- 155 (271)
.... ...++..+++..+++-..++.|+.+|..+++. ... ...........+ +|+++.|+.+.
T Consensus 112 ~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~---~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~ 186 (306)
T 2p4o_A 112 TLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSG---SIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNT 186 (306)
T ss_dssp ECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEE---EEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEET
T ss_pred eCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcE---eEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeC
Confidence 2221 12245555554444444588999999865421 011 000111234445 88887776654
Q ss_pred cCCeEEEEECCC-CeE--EEEeecCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCCceeEE--EecCCcceeEEEEE
Q 024185 156 TNNNIYVLDAYG-GEK--RCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVA--CWNGNIGVVACLKW 230 (271)
Q Consensus 156 ~d~~i~~~d~~~-~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~--~~~~~~~~v~~~~~ 230 (271)
..+.|..+|+.. ++. ...+.... ....++++++|++.++....+.|.++|.. ++... .+.......++++|
T Consensus 187 ~~~~I~~~~~~~~g~~~~~~~~~~~~---~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a~ 262 (306)
T 2p4o_A 187 EKMLLLRIPVDSTDKPGEPEIFVEQT---NIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVIGSTAVAF 262 (306)
T ss_dssp TTTEEEEEEBCTTSCBCCCEEEEESC---CCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGTCTTEEEEEE
T ss_pred CCCEEEEEEeCCCCCCCccEEEeccC---CCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecccccCCceEEEE
Confidence 478999999864 321 11221111 24558999999987777778899999975 65532 33333345789999
Q ss_pred e---cCCcEEEEeC
Q 024185 231 A---PRRAMFVAAS 241 (271)
Q Consensus 231 s---~~~~~l~~~~ 241 (271)
. |+++.|+.++
T Consensus 263 ~g~~~d~~~LyVt~ 276 (306)
T 2p4o_A 263 GQTEGDCTAIYVVT 276 (306)
T ss_dssp CCSTTTTTEEEEEE
T ss_pred ecccCCCCEEEEEC
Confidence 8 8876665554
No 265
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.70 E-value=4.6e-06 Score=71.05 Aligned_cols=164 Identities=11% Similarity=0.027 Sum_probs=106.9
Q ss_pred ceEEEEEecCcceeEEEecC--C--------cce-EEEcCCCC---EEEEEecCCeEEEEeCCCCCCCcceEEEecCC--
Q 024185 72 LEYGIFVLMLASFQGILRLR--G--------RPT-VAFDQQGL---VFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGD-- 135 (271)
Q Consensus 72 g~i~iwd~~~~~~~~~~~~~--~--------~~~-~~~~~~~~---~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~-- 135 (271)
+.|..+|.++|+.+..++.. . .+. .....+|+ .++.++.+|.++++|.++++. +-...+...
T Consensus 272 ~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~--~w~~~~~~~~~ 349 (571)
T 2ad6_A 272 MTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNL--IVAEKVDPAVN 349 (571)
T ss_dssp TEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCE--EEEEESSTTCC
T ss_pred EEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCE--EeeecccCCcc
Confidence 36889999999988877642 1 122 22334674 567788899999999998875 212222110
Q ss_pred --------c-cce--------------------------EEEEEcCCCcEEEEEe-------------------------
Q 024185 136 --------T-AEV--------------------------CDIKFSNDGKSMLLTT------------------------- 155 (271)
Q Consensus 136 --------~-~~v--------------------------~~~~~s~~~~~l~~~~------------------------- 155 (271)
. .++ ..++++|+..++++.+
T Consensus 350 w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~ 429 (571)
T 2ad6_A 350 VFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATL 429 (571)
T ss_dssp SEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEE
T ss_pred ccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccc
Confidence 0 011 2457888877776654
Q ss_pred ------------cCCeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCCceeEEEecCCcc
Q 024185 156 ------------TNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIG 223 (271)
Q Consensus 156 ------------~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 223 (271)
.++.+..||+.+++.+.++..... +....+...+..++.++.||.++.+|.++++.+.+++....
T Consensus 430 ~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~---~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~ 506 (571)
T 2ad6_A 430 AMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFA---AWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSG 506 (571)
T ss_dssp EEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESSC---CCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSC
T ss_pred eeccCccccCCCCCCeEEEEECCCCCEEEEecCCCC---ccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCC
Confidence 247899999999998887764432 22222233456777899999999999999999988864332
Q ss_pred e-eEEEEEecCCcEEEEe
Q 024185 224 V-VACLKWAPRRAMFVAA 240 (271)
Q Consensus 224 ~-v~~~~~s~~~~~l~~~ 240 (271)
. -.-+.+..+|+.++..
T Consensus 507 ~~~~p~~~~~~G~~yv~~ 524 (571)
T 2ad6_A 507 GIGSPMTYSFKGKQYIGS 524 (571)
T ss_dssp CCSCCEEEEETTEEEEEE
T ss_pred cEeeeEEEEECCEEEEEE
Confidence 1 1224456788755544
No 266
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.69 E-value=2.1e-05 Score=62.70 Aligned_cols=176 Identities=7% Similarity=-0.010 Sum_probs=110.1
Q ss_pred cCceEEEEEecCcceeEEEecC-CcceEEEcCCCCEEEEE-ecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCC
Q 024185 70 TALEYGIFVLMLASFQGILRLR-GRPTVAFDQQGLVFAVA-MEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSND 147 (271)
Q Consensus 70 ~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 147 (271)
....|+..+++.......+... ....++|++.++.|+.+ ...+.|+.+++..... .............+++.+.
T Consensus 51 ~~~~I~~i~~~g~~~~~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~----~~~~~~~~~~p~glavd~~ 126 (349)
T 3v64_C 51 NRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNV----EEVVSTGLESPGGLAVDWV 126 (349)
T ss_dssp CBSCEEEECTTSCCEEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC----EEEECSSCSCCCEEEEETT
T ss_pred cccceEEEeCCCCeeEEeecCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCc----eEEEeCCCCCccEEEEecC
Confidence 3455777777655544444333 34559999877666655 4568899999887653 2222222345678899985
Q ss_pred CcEE-EEEecCCeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEec-CC-CcEEEEEcCCceeEEEe-cCCcc
Q 024185 148 GKSM-LLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGS-GD-GTLHAWNINTRNEVACW-NGNIG 223 (271)
Q Consensus 148 ~~~l-~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d-g~i~iwd~~~~~~~~~~-~~~~~ 223 (271)
+..| ++-...+.|.+.++........+.... .....++++|.+..|+... .. +.|...++.. .....+ ...-.
T Consensus 127 ~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l--~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG-~~~~~~~~~~~~ 203 (349)
T 3v64_C 127 HDKLYWTDSGTSRIEVANLDGAHRKVLLWQSL--EKPRAIALHPMEGTIYWTDWGNTPRIEASSMDG-SGRRIIADTHLF 203 (349)
T ss_dssp TTEEEEEETTTTEEEEEETTSCSCEEEECTTC--SCEEEEEEETTTTEEEEEECSSSCEEEEEETTS-CSCEESCCSSCS
T ss_pred CCeEEEEcCCCCeEEEEcCCCCceEEEEeCCC--CCcceEEEecCcCeEEEeccCCCCEEEEEeCCC-CCcEEEEECCCC
Confidence 5445 454557899999986543222222221 2367899999766665544 34 7888888764 333333 22334
Q ss_pred eeEEEEEecCCcEEEEeC---CeEEEEcCCCC
Q 024185 224 VVACLKWAPRRAMFVAAS---SVLSFWIPNPS 252 (271)
Q Consensus 224 ~v~~~~~s~~~~~l~~~~---~~v~iw~~~~~ 252 (271)
..+.++++|++..|..+. +.|..++++..
T Consensus 204 ~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~ 235 (349)
T 3v64_C 204 WPNGLTIDYAGRRMYWVDAKHHVIERANLDGS 235 (349)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CcceEEEeCCCCEEEEEECCCCEEEEEeCCCC
Confidence 568999999777666654 67999998754
No 267
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.68 E-value=2.2e-05 Score=61.38 Aligned_cols=193 Identities=10% Similarity=0.001 Sum_probs=114.0
Q ss_pred ceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEecCC-cceEEEcCCCCEEEEEecC--CeEEEEeCCCC
Q 024185 46 GIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILRLRG-RPTVAFDQQGLVFAVAMEA--GAIKLFDSRSY 122 (271)
Q Consensus 46 ~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~d--~~i~i~d~~~~ 122 (271)
.....++++++++. +++...++.|..||.+.. ....+.... ...+++.++++++++.... ..|..+|..++
T Consensus 32 ~~pegia~~~~g~l-----yv~d~~~~~I~~~d~~g~-~~~~~~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g 105 (306)
T 2p4o_A 32 TFLENLASAPDGTI-----FVTNHEVGEIVSITPDGN-QQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDG 105 (306)
T ss_dssp CCEEEEEECTTSCE-----EEEETTTTEEEEECTTCC-EEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTS
T ss_pred CCcceEEECCCCCE-----EEEeCCCCeEEEECCCCc-eEEEEeCCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCC
Confidence 34556899998886 455567888999988653 333333333 4459999999965554332 24777787766
Q ss_pred CCCcceEEEecCCccceEEEEEcCCCcEEEEEecCCeEEEEECCCCeE-EEEeec-------CCCCCceeeEEECCCCCE
Q 024185 123 DKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEK-RCGFSL-------EPSPNTNTEATFTPDGQY 194 (271)
Q Consensus 123 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~~~~~-~~~~~~-------~~~~~~v~~~~~~~~~~~ 194 (271)
+. ....... .......++..+++..+++-..++.|+.+|..+++. +..... .........+ +|++++
T Consensus 106 ~~--~~~~~~~-~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~ 180 (306)
T 2p4o_A 106 TV--ETLLTLP-DAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNF 180 (306)
T ss_dssp CE--EEEEECT-TCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTE
T ss_pred eE--EEEEeCC-CccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCE
Confidence 63 1112221 122234455556555444444588999999876532 211110 0111123344 788876
Q ss_pred EEEe-cCCCcEEEEEcCC-cee--EEEecCCcceeEEEEEecCCcEEEEeC--CeEEEEcCC
Q 024185 195 VVSG-SGDGTLHAWNINT-RNE--VACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPN 250 (271)
Q Consensus 195 l~~~-~~dg~i~iwd~~~-~~~--~~~~~~~~~~v~~~~~s~~~~~l~~~~--~~v~iw~~~ 250 (271)
|+.+ ...+.|..+|+.. ++. ...+.. ......++++++|+++++.. +.|.+++..
T Consensus 181 lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~ 241 (306)
T 2p4o_A 181 LYVSNTEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEGNLYGATHIYNSVVRIAPD 241 (306)
T ss_dssp EEEEETTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTCCEEEECBTTCCEEEECTT
T ss_pred EEEEeCCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCCCEEEEeCCCCeEEEECCC
Confidence 6655 4568899999864 321 112211 12356789999998766654 779999976
No 268
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.65 E-value=7.5e-05 Score=58.70 Aligned_cols=228 Identities=12% Similarity=-0.015 Sum_probs=132.5
Q ss_pred EEeeecceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCccee-EEEec--
Q 024185 14 LLFARQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQ-GILRL-- 90 (271)
Q Consensus 14 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~-~~~~~-- 90 (271)
|+|+. ...+..++......... ..... ......+.|.+.+..+ +.+-...+.|..++.+.+... ..+..
T Consensus 7 ll~~~-~~~I~~i~l~~~~~~~~--~~~~~-~~~~~~ld~d~~~~~l----yw~D~~~~~I~r~~~~g~~~~~~~~~~~l 78 (318)
T 3sov_A 7 LLYAN-RRDLRLVDATNGKENAT--IVVGG-LEDAAAVDFVFSHGLI----YWSDVSEEAIKRTEFNKTESVQNVVVSGL 78 (318)
T ss_dssp EEEEC-EEEEEEEETTCTTSCCE--EEEEE-EEEEEEEEEEGGGTEE----EEEETTTTEEEEEETTSSSCCCEEEEECC
T ss_pred EEEEc-cCeEEEEECCCCceEEE--EEecC-CCccEEEEEEeCCCEE----EEEECCCCcEEEEEccCCCceEEEEcCCC
Confidence 44443 55666666544321111 11111 2345568888865543 345566788988988765422 12222
Q ss_pred CCcceEEEcCCCCEEEEE-ecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEe--cCCeEEEEECCC
Q 024185 91 RGRPTVAFDQQGLVFAVA-MEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTT--TNNNIYVLDAYG 167 (271)
Q Consensus 91 ~~~~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~d~~i~~~d~~~ 167 (271)
.....+++.+.+..|+.+ ...+.|.++++..... .............+++.|.+..|+.+. ..+.|...++..
T Consensus 79 ~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~----~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG 154 (318)
T 3sov_A 79 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLR----KVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDG 154 (318)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC----EEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTS
T ss_pred CCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcE----EEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCC
Confidence 234558998766555554 5567999999876543 222323445678999999766666555 357898888753
Q ss_pred CeEEEEeecCCCCCceeeEEECCCCCEEEEe-cCCCcEEEEEcCCceeEEEecCCcceeEEEEEecCCcEEEEeC--CeE
Q 024185 168 GEKRCGFSLEPSPNTNTEATFTPDGQYVVSG-SGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVL 244 (271)
Q Consensus 168 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~~v 244 (271)
. ....+... .-.....++++|++..|+.+ +..+.|..+|+..........+......++++..+ .++.+-. +.|
T Consensus 155 ~-~~~~~~~~-~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~~-~lywtd~~~~~V 231 (318)
T 3sov_A 155 S-SRFIIINS-EIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED-ILYWTDWSTHSI 231 (318)
T ss_dssp C-SCEEEECS-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEETT-EEEEEETTTTEE
T ss_pred C-CeEEEEEC-CCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeCC-EEEEEecCCCeE
Confidence 3 22333211 11336789999977766655 44678999998643332223323344567777533 3333432 779
Q ss_pred EEEcCCCCCCCc
Q 024185 245 SFWIPNPSSNST 256 (271)
Q Consensus 245 ~iw~~~~~~~~~ 256 (271)
..++..+++...
T Consensus 232 ~~~~~~~G~~~~ 243 (318)
T 3sov_A 232 LACNKYTGEGLR 243 (318)
T ss_dssp EEEETTTCCSCE
T ss_pred EEEECCCCCceE
Confidence 999987776543
No 269
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.63 E-value=1.8e-05 Score=64.02 Aligned_cols=177 Identities=7% Similarity=-0.033 Sum_probs=110.4
Q ss_pred cCceEEEEEecCcceeEEEecC-CcceEEEcCCCCEEEEE-ecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCC
Q 024185 70 TALEYGIFVLMLASFQGILRLR-GRPTVAFDQQGLVFAVA-MEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSND 147 (271)
Q Consensus 70 ~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 147 (271)
....|+..++............ ....++|++.++.|+.+ ..++.|+.+++..... ...+.........+++.+.
T Consensus 94 ~~~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~----~~~~~~~~~~p~glavd~~ 169 (386)
T 3v65_B 94 NRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNV----EEVVSTGLESPGGLAVDWV 169 (386)
T ss_dssp CBSCEEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCE----EEEECSSCSCCCCEEEETT
T ss_pred cCccceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCc----EEEEeCCCCCccEEEEEeC
Confidence 4456777777665544444433 34459999876666655 4567899999886552 2222222334567888885
Q ss_pred CcEE-EEEecCCeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEecC-C-CcEEEEEcCCceeEEEecCCcce
Q 024185 148 GKSM-LLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSG-D-GTLHAWNINTRNEVACWNGNIGV 224 (271)
Q Consensus 148 ~~~l-~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d-g~i~iwd~~~~~~~~~~~~~~~~ 224 (271)
+..| ++-...+.|.+.++........+.... .....++++|.+.+|+.... . +.|..+++............-..
T Consensus 170 ~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l--~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~ 247 (386)
T 3v65_B 170 HDKLYWTDSGTSRIEVANLDGAHRKVLLWQSL--EKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFW 247 (386)
T ss_dssp TTEEEEEETTTTEEEECBTTSCSCEEEECSSC--SCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSC
T ss_pred CCeEEEEcCCCCeEEEEeCCCCceEEeecCCC--CCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCC
Confidence 5545 444557889999876443222222221 23678999997776665543 3 67888887643333333333345
Q ss_pred eEEEEEecCCcEEEEeC---CeEEEEcCCCC
Q 024185 225 VACLKWAPRRAMFVAAS---SVLSFWIPNPS 252 (271)
Q Consensus 225 v~~~~~s~~~~~l~~~~---~~v~iw~~~~~ 252 (271)
.+.++|+|++..|..+. +.|..++++..
T Consensus 248 PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~ 278 (386)
T 3v65_B 248 PNGLTIDYAGRRMYWVDAKHHVIERANLDGS 278 (386)
T ss_dssp EEEEEEEGGGTEEEEEETTTTEEEEECTTSC
T ss_pred eeeEEEeCCCCEEEEEECCCCEEEEEeCCCC
Confidence 68999998776666654 67999998754
No 270
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.62 E-value=5.2e-05 Score=61.63 Aligned_cols=183 Identities=8% Similarity=-0.037 Sum_probs=113.3
Q ss_pred ccCceEEEEEecCcceeEEEecC-CcceEEEcCCCCEEEEE-ecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcC
Q 024185 69 TTALEYGIFVLMLASFQGILRLR-GRPTVAFDQQGLVFAVA-MEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSN 146 (271)
Q Consensus 69 ~~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 146 (271)
+....|+..+++........... ....++|++.++.|+.+ ..++.|+.+++......................+++.+
T Consensus 89 ~~~~~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~ 168 (400)
T 3p5b_L 89 TNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDW 168 (400)
T ss_dssp EETTEEEEECTTSCSCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEET
T ss_pred eccceeEEEccCCcceeEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEe
Confidence 34466777777665544444433 34559999877766666 45678999998753210011222333345678899998
Q ss_pred C-CcEEEEEecCCeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEecC--CCcEEEEEcCCceeEEEecCCcc
Q 024185 147 D-GKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSG--DGTLHAWNINTRNEVACWNGNIG 223 (271)
Q Consensus 147 ~-~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~ 223 (271)
. ++++++-...+.|.+.++........+.... .....++++|.+.+|+.... .+.|...++............-.
T Consensus 169 ~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~--~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~ 246 (400)
T 3p5b_L 169 IHSNIYWTDSVLGTVSVADTKGVKRKTLFRENG--SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQ 246 (400)
T ss_dssp TTTEEEEEETTTTEEEEECTTTCSEEEEEECSS--CCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCS
T ss_pred cCCceEEEECCCCeEEEEeCCCCceEEEEeCCC--CCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCC
Confidence 4 4444555567899999987554333333222 23778999997766665542 47899998864443333333335
Q ss_pred eeEEEEEecCCcEEEEeC---CeEEEEcCCCCC
Q 024185 224 VVACLKWAPRRAMFVAAS---SVLSFWIPNPSS 253 (271)
Q Consensus 224 ~v~~~~~s~~~~~l~~~~---~~v~iw~~~~~~ 253 (271)
....|+++|++..|..+. +.|..+|++...
T Consensus 247 ~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~ 279 (400)
T 3p5b_L 247 WPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN 279 (400)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCC
T ss_pred ceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCc
Confidence 678999999877776665 679999987644
No 271
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.62 E-value=3.6e-06 Score=74.15 Aligned_cols=151 Identities=13% Similarity=0.098 Sum_probs=94.4
Q ss_pred ceEEEc-CCCCEEEEEec-CC----eEEEEeCCCC-CCCcceEEEecCCccceEEEEEcCCCcEEEEEecC-----CeEE
Q 024185 94 PTVAFD-QQGLVFAVAME-AG----AIKLFDSRSY-DKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTN-----NNIY 161 (271)
Q Consensus 94 ~~~~~~-~~~~~l~~~~~-d~----~i~i~d~~~~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----~~i~ 161 (271)
...+|| |||++|+.+.. +| .|+++|+.++ +. +.. .+ ......++|+|||+.|+....+ ..|+
T Consensus 177 ~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~--l~~-~~---~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~ 250 (751)
T 2xe4_A 177 MEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQT--IAD-KV---SGTNGEIVWGPDHTSLFYVTKDETLRENKVW 250 (751)
T ss_dssp EEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCC--CCC-CE---EEECSCCEECSSTTEEEEEEECTTCCEEEEE
T ss_pred eeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEe--CCc-cc---cCceeeEEEecCCCEEEEEEECCCCCCCEEE
Confidence 348999 99998887643 23 5999999987 53 111 11 1123568899999988887765 3688
Q ss_pred EEECCCCeE--EEEeecCCCCCceeeEEECCCCCEEEEecC---CCcEEEEEcCCce-eE--EEe-cCCcceeEEEEEec
Q 024185 162 VLDAYGGEK--RCGFSLEPSPNTNTEATFTPDGQYVVSGSG---DGTLHAWNINTRN-EV--ACW-NGNIGVVACLKWAP 232 (271)
Q Consensus 162 ~~d~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---dg~i~iwd~~~~~-~~--~~~-~~~~~~v~~~~~s~ 232 (271)
.+++.+++. ...+..... .....+.|+|||++|+..+. ...|+++|+.++. .. ..+ ........++.|+.
T Consensus 251 ~~~lgt~~~~~~lv~~~~~~-~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~ 329 (751)
T 2xe4_A 251 RHVMGKLQSEDVCLYEEHNP-LFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHG 329 (751)
T ss_dssp EEETTSCGGGCEEEEECCCT-TCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEET
T ss_pred EEECCCCchhcEEEEecCCC-ceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeee
Confidence 889877642 222322222 23567899999999886553 3468889988752 22 333 33344455566554
Q ss_pred CCcEEEEeC-C-----eEEEEcCCC
Q 024185 233 RRAMFVAAS-S-----VLSFWIPNP 251 (271)
Q Consensus 233 ~~~~l~~~~-~-----~v~iw~~~~ 251 (271)
++.+++.+. + .|..+++.+
T Consensus 330 g~~l~~~t~~~~a~~~~L~~~d~~~ 354 (751)
T 2xe4_A 330 TSHLVILTNEGGAVNHKLLIAPRGQ 354 (751)
T ss_dssp TTEEEEEECTTTCTTCEEEEEETTS
T ss_pred CCEEEEEeCCCCCCCcEEEEEcCCC
Confidence 444444443 2 466777654
No 272
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.62 E-value=9.2e-05 Score=58.13 Aligned_cols=226 Identities=10% Similarity=-0.031 Sum_probs=130.5
Q ss_pred EEeeecceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecC----cceeEEEe
Q 024185 14 LLFARQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLML----ASFQGILR 89 (271)
Q Consensus 14 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~----~~~~~~~~ 89 (271)
|+|+. ...+..++....... .... .......+++++.+..+ +++-...+.|..++++. ......+.
T Consensus 4 ll~~~-~~~I~~i~~~~~~~~----~~~~-~~~~p~g~~~d~~~~~l----y~~D~~~~~I~~~~~~g~~~~~~~~~~~~ 73 (316)
T 1ijq_A 4 LFFTN-RHEVRKMTLDRSEYT----SLIP-NLRNVVALDTEVASNRI----YWSDLSQRMICSTQLDRAHGVSSYDTVIS 73 (316)
T ss_dssp EEEEC-BSSEEEEETTSCCCE----EEEC-SCSSEEEEEEETTTTEE----EEEETTTTEEEEEEC--------CEEEEC
T ss_pred EEEEC-CCeEEEEECCCcceE----ehhc-CCCceEEEEEEeCCCEE----EEEECCCCcEEEEECCCCCCCcccEEEEe
Confidence 34443 445666665444211 1122 23445678999876543 34556678999999875 22222232
Q ss_pred c--CCcceEEEcCCCCEEEEE-ecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEec-C-CeEEEEE
Q 024185 90 L--RGRPTVAFDQQGLVFAVA-MEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTT-N-NNIYVLD 164 (271)
Q Consensus 90 ~--~~~~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-d-~~i~~~d 164 (271)
. .....+++.+.+..|+.+ ..++.|.+++...... .............+++.|.+..|+.+.. . +.|..++
T Consensus 74 ~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~----~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~ 149 (316)
T 1ijq_A 74 RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKR----KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGG 149 (316)
T ss_dssp SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSE----EEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEE
T ss_pred CCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCce----EEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEc
Confidence 2 234568998766555555 5678999999875432 2222223356789999996666655544 3 6888888
Q ss_pred CCCCeEEEEeecCCCCCceeeEEECCCCCEEEEec-CCCcEEEEEcCCceeEEEec--CCcceeEEEEEecCCcEEEEeC
Q 024185 165 AYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGS-GDGTLHAWNINTRNEVACWN--GNIGVVACLKWAPRRAMFVAAS 241 (271)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~ 241 (271)
+. ++....+... .-.....++++|++..|+.+. ..+.|..+|+.......... .......++++. ++.++++..
T Consensus 150 ~d-G~~~~~~~~~-~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~-~~~ly~~d~ 226 (316)
T 1ijq_A 150 LN-GVDIYSLVTE-NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDI 226 (316)
T ss_dssp TT-SCCEEEEECS-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE-TTEEEEEET
T ss_pred CC-CCCeEEEEEC-CCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEE-CCEEEEEEC
Confidence 75 3333333211 123467899999877776554 46789999986432222222 122335677775 344444443
Q ss_pred --CeEEEEcCCCCCCCc
Q 024185 242 --SVLSFWIPNPSSNST 256 (271)
Q Consensus 242 --~~v~iw~~~~~~~~~ 256 (271)
+.|..++..+++...
T Consensus 227 ~~~~V~~~~~~~g~~~~ 243 (316)
T 1ijq_A 227 INEAIFSANRLTGSDVN 243 (316)
T ss_dssp TTTEEEEEETTTCCCCE
T ss_pred CCCeEEEEeCCCCcceE
Confidence 778888887665443
No 273
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.58 E-value=7.3e-06 Score=67.32 Aligned_cols=149 Identities=15% Similarity=0.167 Sum_probs=96.5
Q ss_pred ceEEEcC-CCCEEEEEecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEecC-C----eEEEEECCC
Q 024185 94 PTVAFDQ-QGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTN-N----NIYVLDAYG 167 (271)
Q Consensus 94 ~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-~----~i~~~d~~~ 167 (271)
..++++| ++..|+++...+.|+.+|+..... ..+.........++|+++|++|+++... + .+..++. .
T Consensus 140 ~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v-----~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~ 213 (430)
T 3tc9_A 140 VWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYV-----STVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-E 213 (430)
T ss_dssp CEEEEETTEEEEEEEEEBTEEEEEEETTTTEE-----EEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-G
T ss_pred CEEEECCCCCCeEEEEeCCCcEEEEECCCCEE-----EEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-C
Confidence 4589998 466677776668899999887653 2222244568899999999977666541 1 3444443 2
Q ss_pred CeEE--EEeecCCCCCceeeEEECC-CCCEEEEecCCCcEEEEEcCCceeEEEec-CCcceeEEEEEecCCcEEEEeC--
Q 024185 168 GEKR--CGFSLEPSPNTNTEATFTP-DGQYVVSGSGDGTLHAWNINTRNEVACWN-GNIGVVACLKWAPRRAMFVAAS-- 241 (271)
Q Consensus 168 ~~~~--~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~-- 241 (271)
+... ..+..... ...++++| +|.++++-..++.|..++...+....... +.......++|+|+|++|..+.
T Consensus 214 g~~~~~~~l~~~~~---p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~ 290 (430)
T 3tc9_A 214 SGFKVITELTKGQN---CNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVN 290 (430)
T ss_dssp GTSCSEEEEEECSS---CCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETT
T ss_pred CceeeeeeeccCCC---ceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECC
Confidence 3221 22222222 45688999 67766666678899999998766422221 1223467899999999655553
Q ss_pred -CeEEEEcCCC
Q 024185 242 -SVLSFWIPNP 251 (271)
Q Consensus 242 -~~v~iw~~~~ 251 (271)
+.|..++.+.
T Consensus 291 ~~~I~~~~~d~ 301 (430)
T 3tc9_A 291 QHYILRSDYDW 301 (430)
T ss_dssp TTEEEEEEEET
T ss_pred CCEEEEEeCCc
Confidence 7788887653
No 274
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.57 E-value=0.00015 Score=58.98 Aligned_cols=226 Identities=11% Similarity=-0.037 Sum_probs=129.5
Q ss_pred EeeecceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCc----ceeEEEec
Q 024185 15 LFARQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLA----SFQGILRL 90 (271)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~----~~~~~~~~ 90 (271)
++......+..++....... . +.........++|++.+..+ +++-...+.|+.++++.. .....+..
T Consensus 86 ll~~~~~~I~~i~l~~~~~~----~-~~~~~~~~~~l~~d~~~~~l----ywsD~~~~~I~~~~~~g~~~~~~~~~~~~~ 156 (400)
T 3p5b_L 86 LFFTNRHEVRKMTLDRSEYT----S-LIPNLRNVVALDTEVASNRI----YWSDLSQRMICSTQLDRAHGVSSYDTVISR 156 (400)
T ss_dssp EEEEETTEEEEECTTSCSCE----E-EECSCSCEEEEEEETTTTEE----EEEETTTTEEEEEEC------CCCEEEECS
T ss_pred eEEeccceeEEEccCCccee----E-eccccCcceEEeeeeccCce----EEEecCCCeEEEEEcccCCCCCcceEEEeC
Confidence 33333456666655433211 1 12234456679999866553 335556788888888652 22222221
Q ss_pred --CCcceEEEcCCCCEEEEE-ecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEec--CCeEEEEEC
Q 024185 91 --RGRPTVAFDQQGLVFAVA-MEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTT--NNNIYVLDA 165 (271)
Q Consensus 91 --~~~~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~--d~~i~~~d~ 165 (271)
.....+++.+.++.|+.+ ...+.|.+.++..... ...+.........+++.|.+.+|+.+.. .+.|...++
T Consensus 157 ~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~----~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~ 232 (400)
T 3p5b_L 157 DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKR----KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGL 232 (400)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSE----EEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEET
T ss_pred CCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCce----EEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeC
Confidence 234458998855555555 5577899999876542 2223333455789999996666665542 478999887
Q ss_pred CCCeEEEEeecCCCCCceeeEEECCCCCEEEEec-CCCcEEEEEcCCceeEEEecC--CcceeEEEEEecCCcEEEEeC-
Q 024185 166 YGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGS-GDGTLHAWNINTRNEVACWNG--NIGVVACLKWAPRRAMFVAAS- 241 (271)
Q Consensus 166 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~- 241 (271)
..... ..+... .-.....++++|++..|+.+. ..+.|..+|+........... .-....++++. .+.++.+..
T Consensus 233 dG~~~-~~~~~~-~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~ 309 (400)
T 3p5b_L 233 NGVDI-YSLVTE-NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDII 309 (400)
T ss_dssp TSCSC-EEEECS-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESS
T ss_pred CCCcc-EEEEEC-CCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCC
Confidence 64332 333211 113477899999887777664 467899999864433332222 12334567763 333444433
Q ss_pred -CeEEEEcCCCCCCCc
Q 024185 242 -SVLSFWIPNPSSNST 256 (271)
Q Consensus 242 -~~v~iw~~~~~~~~~ 256 (271)
+.|..+|..+++...
T Consensus 310 ~~~V~~~~~~~G~~~~ 325 (400)
T 3p5b_L 310 NEAIFSANRLTGSDVN 325 (400)
T ss_dssp SCSEEEEESSSCCCCE
T ss_pred CCeEEEEEcCCCCceE
Confidence 668888876665543
No 275
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.57 E-value=7e-05 Score=66.34 Aligned_cols=227 Identities=11% Similarity=-0.002 Sum_probs=136.7
Q ss_pred eeEEeeecceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEe--
Q 024185 12 QALLFARQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILR-- 89 (271)
Q Consensus 12 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-- 89 (271)
..+.++..++.+..++...+..... ..........|.++...+++.. ..|+.++-+..+|.++++......
T Consensus 374 g~lWigt~~~Gl~~~~~~~~~~~~~-~~~~~~~~~~v~~i~~d~~g~l------Wigt~~~Gl~~~~~~~~~~~~~~~~~ 446 (781)
T 3v9f_A 374 GKLWIGTDGGGINVFENGKRVAIYN-KENRELLSNSVLCSLKDSEGNL------WFGTYLGNISYYNTRLKKFQIIELEK 446 (781)
T ss_dssp SCEEEEEBSSCEEEEETTEEEEECC------CCCSBEEEEEECTTSCE------EEEETTEEEEEECSSSCEEEECCSTT
T ss_pred CCEEEEeCCCcEEEEECCCCeEEEc-cCCCCCCCcceEEEEECCCCCE------EEEeccCCEEEEcCCCCcEEEeccCC
Confidence 4566666556666666533311100 0000223456788887777774 345666778888887765433221
Q ss_pred --cCCcceEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcceEEEecC----CccceEEEEEcCCCcEEEEEecCCeEEEE
Q 024185 90 --LRGRPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGG----DTAEVCDIKFSNDGKSMLLTTTNNNIYVL 163 (271)
Q Consensus 90 --~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~----~~~~v~~~~~s~~~~~l~~~~~d~~i~~~ 163 (271)
...+.++...++++ |..|+. +-+..||..+++. ....... ....|.++...++|. |..|+.++-+..|
T Consensus 447 ~~~~~v~~i~~d~~g~-lwigt~-~Gl~~~~~~~~~~---~~~~~~~~~~~~~~~i~~i~~d~~g~-lWigt~~~Gl~~~ 520 (781)
T 3v9f_A 447 NELLDVRVFYEDKNKK-IWIGTH-AGVFVIDLASKKV---IHHYDTSNSQLLENFVRSIAQDSEGR-FWIGTFGGGVGIY 520 (781)
T ss_dssp TCCCCEEEEEECTTSE-EEEEET-TEEEEEESSSSSC---CEEECTTTSSCSCSCEEEEEECTTCC-EEEEESSSCEEEE
T ss_pred CCCCeEEEEEECCCCC-EEEEEC-CceEEEeCCCCeE---EecccCcccccccceeEEEEEcCCCC-EEEEEcCCCEEEE
Confidence 12355566676666 555555 5688999887654 1111111 135789999998887 5556654458889
Q ss_pred ECCCCeEEEEeecCC--CCCceeeEEECCCCCEEEEecCCCcEEEEEcCCceeEEEecCC----cceeEEEEEecCCcEE
Q 024185 164 DAYGGEKRCGFSLEP--SPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGN----IGVVACLKWAPRRAMF 237 (271)
Q Consensus 164 d~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~----~~~v~~~~~s~~~~~l 237 (271)
|..+++... +.... ....|.++..+++|++.+... +|.+..||..+++. ..+... ...|.++...++|++.
T Consensus 521 ~~~~~~~~~-~~~~~~l~~~~i~~i~~d~~g~lWi~T~-~Glv~~~d~~~~~~-~~~~~~~gl~~~~i~~i~~d~~g~lW 597 (781)
T 3v9f_A 521 TPDMQLVRK-FNQYEGFCSNTINQIYRSSKGQMWLATG-EGLVCFPSARNFDY-QVFQRKEGLPNTHIRAISEDKNGNIW 597 (781)
T ss_dssp CTTCCEEEE-ECTTTTCSCSCEEEEEECTTSCEEEEET-TEEEEESCTTTCCC-EEECGGGTCSCCCCCEEEECSSSCEE
T ss_pred eCCCCeEEE-ccCCCCCCCCeeEEEEECCCCCEEEEEC-CCceEEECCCCCcE-EEccccCCCCCceEEEEEECCCCCEE
Confidence 977665433 32211 124588888899998666544 66558898876654 333211 2357888889999988
Q ss_pred EEeCCeEEEEcCCCCCC
Q 024185 238 VAASSVLSFWIPNPSSN 254 (271)
Q Consensus 238 ~~~~~~v~iw~~~~~~~ 254 (271)
+++.+.+..|+.++++.
T Consensus 598 ~~t~~Gl~~~~~~~~~~ 614 (781)
T 3v9f_A 598 ASTNTGISCYITSKKCF 614 (781)
T ss_dssp EECSSCEEEEETTTTEE
T ss_pred EEcCCceEEEECCCCce
Confidence 87775577788766543
No 276
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.55 E-value=9.4e-05 Score=65.50 Aligned_cols=230 Identities=10% Similarity=0.041 Sum_probs=136.8
Q ss_pred eeEEeeecceeeEEEEeeccceeeEEEE-----EcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeE
Q 024185 12 QALLFARQNIILILLESLCGIYQCMIIE-----FFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQG 86 (271)
Q Consensus 12 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~ 86 (271)
..+.+++.++.+..++...+........ ........|.++...+++.. ..|+.++-+..||..++....
T Consensus 324 g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~l------Wigt~~~Gl~~~~~~~~~~~~ 397 (781)
T 3v9f_A 324 NNIWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKL------WIGTDGGGINVFENGKRVAIY 397 (781)
T ss_dssp CCEEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCE------EEEEBSSCEEEEETTEEEEEC
T ss_pred CCEEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCCE------EEEeCCCcEEEEECCCCeEEE
Confidence 4455666555666665443321111000 00112356888888877774 355666678889886654322
Q ss_pred EE-----ecCCcceEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcceEEEe-cCCccceEEEEEcCCCcEEEEEecCCeE
Q 024185 87 IL-----RLRGRPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLV-GGDTAEVCDIKFSNDGKSMLLTTTNNNI 160 (271)
Q Consensus 87 ~~-----~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~d~~i 160 (271)
.. ....+.++...++++ |.+|+.++-+..+|..+++. ..... ......|.++...++|. |..|+. +-+
T Consensus 398 ~~~~~~~~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~---~~~~~~~~~~~~v~~i~~d~~g~-lwigt~-~Gl 471 (781)
T 3v9f_A 398 NKENRELLSNSVLCSLKDSEGN-LWFGTYLGNISYYNTRLKKF---QIIELEKNELLDVRVFYEDKNKK-IWIGTH-AGV 471 (781)
T ss_dssp C-----CCCSBEEEEEECTTSC-EEEEETTEEEEEECSSSCEE---EECCSTTTCCCCEEEEEECTTSE-EEEEET-TEE
T ss_pred ccCCCCCCCcceEEEEECCCCC-EEEEeccCCEEEEcCCCCcE---EEeccCCCCCCeEEEEEECCCCC-EEEEEC-Cce
Confidence 11 112345566666666 55577667799999876542 11111 11346789998888876 555555 568
Q ss_pred EEEECCCCeEEEEeecC---CCCCceeeEEECCCCCEEEEecCCCcEEEEEcCCceeEEEecC----CcceeEEEEEecC
Q 024185 161 YVLDAYGGEKRCGFSLE---PSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNG----NIGVVACLKWAPR 233 (271)
Q Consensus 161 ~~~d~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~----~~~~v~~~~~s~~ 233 (271)
..||..+++........ .....+.++...++|++.+....+| +..+|..+++... +.. ....|.++...++
T Consensus 472 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~G-l~~~~~~~~~~~~-~~~~~~l~~~~i~~i~~d~~ 549 (781)
T 3v9f_A 472 FVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGG-VGIYTPDMQLVRK-FNQYEGFCSNTINQIYRSSK 549 (781)
T ss_dssp EEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSC-EEEECTTCCEEEE-ECTTTTCSCSCEEEEEECTT
T ss_pred EEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCC-EEEEeCCCCeEEE-ccCCCCCCCCeeEEEEECCC
Confidence 99998776543332211 0124588899999998655443344 7788887665433 321 1346889999999
Q ss_pred CcEEEEeCCeE-EEEcCCCCCCC
Q 024185 234 RAMFVAASSVL-SFWIPNPSSNS 255 (271)
Q Consensus 234 ~~~l~~~~~~v-~iw~~~~~~~~ 255 (271)
|++.++..+-+ ..||..+++..
T Consensus 550 g~lWi~T~~Glv~~~d~~~~~~~ 572 (781)
T 3v9f_A 550 GQMWLATGEGLVCFPSARNFDYQ 572 (781)
T ss_dssp SCEEEEETTEEEEESCTTTCCCE
T ss_pred CCEEEEECCCceEEECCCCCcEE
Confidence 99777766555 88998876653
No 277
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.53 E-value=2.7e-05 Score=66.55 Aligned_cols=163 Identities=10% Similarity=-0.002 Sum_probs=103.6
Q ss_pred ceEEEEEecCcceeEEEecCC----------cce-EEEc-CCC---CEEEEEecCCeEEEEeCCCCCCCcceEEEecC--
Q 024185 72 LEYGIFVLMLASFQGILRLRG----------RPT-VAFD-QQG---LVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGG-- 134 (271)
Q Consensus 72 g~i~iwd~~~~~~~~~~~~~~----------~~~-~~~~-~~~---~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~-- 134 (271)
+.|.-+|.++|+.+..++... .+. +... .+| +.++.++.+|.++++|.++++. +-...+..
T Consensus 278 ~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~--lw~~~~~~~~ 355 (599)
T 1w6s_A 278 MTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGAL--VSANKLDDTV 355 (599)
T ss_dssp SEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCE--EEEEESSTTC
T ss_pred ceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCE--eecccccCCc
Confidence 478999999999888776431 112 2232 567 4677788999999999999875 21111110
Q ss_pred ---------Cccc--------------------------eEEEEEcCCCcEEEEEe------------------------
Q 024185 135 ---------DTAE--------------------------VCDIKFSNDGKSMLLTT------------------------ 155 (271)
Q Consensus 135 ---------~~~~--------------------------v~~~~~s~~~~~l~~~~------------------------ 155 (271)
...+ -..++++|+..++++..
T Consensus 356 ~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~ 435 (599)
T 1w6s_A 356 NVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGAT 435 (599)
T ss_dssp CSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEE
T ss_pred ccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceeccc
Confidence 0001 12456777666555431
Q ss_pred ---------------cCCeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCCceeEEEecC
Q 024185 156 ---------------TNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNG 220 (271)
Q Consensus 156 ---------------~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 220 (271)
..|.+..||+.+++.+.+...... ...-.+...+..++.++.||.++.+|.++|+.+.+++.
T Consensus 436 ~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~~---~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l 512 (599)
T 1w6s_A 436 LNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKMERFA---VWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKI 512 (599)
T ss_dssp EEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEESSC---CCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred ceeccCCcCCcccCCCcCeEEEEECCCCCEEeEecCCCC---ccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeC
Confidence 347899999999998877653321 11111223566788899999999999999999988854
Q ss_pred Ccce-eEEEEEecCCcE-EEE
Q 024185 221 NIGV-VACLKWAPRRAM-FVA 239 (271)
Q Consensus 221 ~~~~-v~~~~~s~~~~~-l~~ 239 (271)
..+. ..-+.+..+|+. +++
T Consensus 513 ~~g~~~~P~~y~~~G~qyv~~ 533 (599)
T 1w6s_A 513 PSGAIGYPMTYTHKGTQYVAI 533 (599)
T ss_dssp SSCCCSCCEEEEETTEEEEEE
T ss_pred CCCcEeccEEEEeCCEEEEEE
Confidence 3321 123556678874 443
No 278
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.51 E-value=1.8e-05 Score=67.55 Aligned_cols=164 Identities=13% Similarity=0.165 Sum_probs=105.5
Q ss_pred ceEEEEEecCcceeEEEec--CC--------cceE-EEc-CCCC---EEEEEecCCeEEEEeCCCCCCCcceEEEecCC-
Q 024185 72 LEYGIFVLMLASFQGILRL--RG--------RPTV-AFD-QQGL---VFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGD- 135 (271)
Q Consensus 72 g~i~iwd~~~~~~~~~~~~--~~--------~~~~-~~~-~~~~---~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~- 135 (271)
+.|.-+|.++|+.+..++. |. .+.+ ... .+|+ .++.++.+|.++++|.++++. +-...+...
T Consensus 291 ~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~--lw~~~~~~~~ 368 (582)
T 1flg_A 291 SGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKL--QNAFPFVDNI 368 (582)
T ss_dssp SEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTCCE--EEEEESSSCC
T ss_pred ceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCCCE--ecccccccCc
Confidence 6899999999999888754 21 1222 222 4674 678889999999999998875 211111100
Q ss_pred ----------ccc--------------------------------eEEEEEcCCCcEEEEEe------------------
Q 024185 136 ----------TAE--------------------------------VCDIKFSNDGKSMLLTT------------------ 155 (271)
Q Consensus 136 ----------~~~--------------------------------v~~~~~s~~~~~l~~~~------------------ 155 (271)
..+ -..++++|+...+++..
T Consensus 369 ~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~ 448 (582)
T 1flg_A 369 TWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGS 448 (582)
T ss_dssp CSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTS
T ss_pred cccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCC
Confidence 000 01346677655555433
Q ss_pred ---------------cCCeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCCceeEEEecC
Q 024185 156 ---------------TNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNG 220 (271)
Q Consensus 156 ---------------~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 220 (271)
.+|.|..||+.+++.+.+...... ...-.....+..++.++.||.++.||.++|+.+.+++.
T Consensus 449 ~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~---~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~ 525 (582)
T 1flg_A 449 AYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLP---LWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQT 525 (582)
T ss_dssp CCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSC---CCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred ceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCCC---CcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecC
Confidence 257899999999998877664332 11111222456788899999999999999999998865
Q ss_pred Cccee-EEEEEecCCc-EEEEe
Q 024185 221 NIGVV-ACLKWAPRRA-MFVAA 240 (271)
Q Consensus 221 ~~~~v-~~~~~s~~~~-~l~~~ 240 (271)
..+.. .-+.|..+|+ |+++.
T Consensus 526 ~~g~~a~P~~y~~~G~qYv~~~ 547 (582)
T 1flg_A 526 GSGIVSPPITWEQDGEQYLGVT 547 (582)
T ss_dssp SSCCCSCCEEEEETTEEEEEEE
T ss_pred CCCcccCceEEEECCEEEEEEE
Confidence 43322 2366778887 44443
No 279
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.45 E-value=4.5e-05 Score=62.67 Aligned_cols=191 Identities=12% Similarity=0.045 Sum_probs=110.2
Q ss_pred EEeeEEecC---CchhhhhhhhhhccCceEEEEEecCcceeEEEecC-CcceEEEcCCCCEEEEEecCC-----eEEEEe
Q 024185 48 RRGLFLSAC---LQLMIALCLVLLTTALEYGIFVLMLASFQGILRLR-GRPTVAFDQQGLVFAVAMEAG-----AIKLFD 118 (271)
Q Consensus 48 v~~~~~s~~---~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~d~-----~i~i~d 118 (271)
-..++++|+ +.. +++ ...+.|+.+|..+++........ ....++++++++ |+++...+ .+...+
T Consensus 141 P~gvavd~~s~~g~L-----yv~-D~~~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~ 213 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDL-----YWV-GQRDAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFT 213 (433)
T ss_dssp CCEEEECTTTTTCEE-----EEE-CBTSCEEEEETTTTEEEEECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEEC
T ss_pred CceEEEccccCCCEE-----EEE-eCCCCEEEEECCCCEEEEeecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEE
Confidence 446788874 443 222 22288999998777655444322 355699999999 55554321 233344
Q ss_pred CCCCCCCcceEEEecCCccceEEEEEcC-CCcEEEEEecCCeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEE
Q 024185 119 SRSYDKGPFDTFLVGGDTAEVCDIKFSN-DGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVS 197 (271)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 197 (271)
....... ...+. .......++++| +|.++++-..++.|+.+|..+++....+........-..++|+|++++|+.
T Consensus 214 ~~~~~~~---~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYv 289 (433)
T 4hw6_A 214 RASGFTE---RLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYI 289 (433)
T ss_dssp GGGTTCC---EEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEE
T ss_pred CCCCeec---ccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEE
Confidence 3322210 11111 223456788999 666555555678999999887765333322222222346999999995554
Q ss_pred e-cCCCcEEEEEcC--Ccee--EEEecCC---------------cceeEEEEE---------ecCCcEEEEeC--CeEEE
Q 024185 198 G-SGDGTLHAWNIN--TRNE--VACWNGN---------------IGVVACLKW---------APRRAMFVAAS--SVLSF 246 (271)
Q Consensus 198 ~-~~dg~i~iwd~~--~~~~--~~~~~~~---------------~~~v~~~~~---------s~~~~~l~~~~--~~v~i 246 (271)
+ ...+.|+.++.. ++.. ...+.+. -.....+++ .++|+++++-. +.|+.
T Consensus 290 ad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~ 369 (433)
T 4hw6_A 290 IYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRV 369 (433)
T ss_dssp EETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEE
T ss_pred EeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEE
Confidence 4 456789998865 2321 1122111 113567898 66777666554 67888
Q ss_pred EcC
Q 024185 247 WIP 249 (271)
Q Consensus 247 w~~ 249 (271)
++.
T Consensus 370 ~~~ 372 (433)
T 4hw6_A 370 LTP 372 (433)
T ss_dssp ECT
T ss_pred ECC
Confidence 885
No 280
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.45 E-value=7.8e-05 Score=61.21 Aligned_cols=153 Identities=8% Similarity=0.041 Sum_probs=92.2
Q ss_pred EEeeEEec-CCchhhhhhhhhhccCceEEEEEecCcceeEEEecCC-cceEEEcCCCCEEEEEecC-C----eEEEEeCC
Q 024185 48 RRGLFLSA-CLQLMIALCLVLLTTALEYGIFVLMLASFQGILRLRG-RPTVAFDQQGLVFAVAMEA-G----AIKLFDSR 120 (271)
Q Consensus 48 v~~~~~s~-~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~d-~----~i~i~d~~ 120 (271)
...++++| ++.. |..+...+.|+.+|++++.......... ...+++++++++|+++... + .+..++..
T Consensus 139 P~~lavdp~~~g~-----Lyv~d~~~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~ 213 (430)
T 3tc9_A 139 AVWLSFDPKNHNH-----LYLVGEQHPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE 213 (430)
T ss_dssp CCEEEEETTEEEE-----EEEEEBTEEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG
T ss_pred CCEEEECCCCCCe-----EEEEeCCCcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC
Confidence 35578887 3443 2222333888889987766544443333 4459999999977776542 1 34444433
Q ss_pred CCCCCcceEEEecCCccceEEEEEcC-CCcEEEEEecCCeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEe-
Q 024185 121 SYDKGPFDTFLVGGDTAEVCDIKFSN-DGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSG- 198 (271)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~- 198 (271)
+..... ..+. .......++++| ++..+++-..++.|..++...+.......... ......++|+|+|++|+.+
T Consensus 214 -g~~~~~--~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~-~~~P~gia~~pdG~~lyv~d 288 (430)
T 3tc9_A 214 -SGFKVI--TELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQD-SGWEFHIQFHPSGNYAYIVV 288 (430)
T ss_dssp -GTSCSE--EEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSS-SSCCEEEEECTTSSEEEEEE
T ss_pred -Cceeee--eeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCC-CCcceeEEEcCCCCEEEEEE
Confidence 322111 1111 123456788999 66655555568899999988776433222221 1236679999999955544
Q ss_pred cCCCcEEEEEcC
Q 024185 199 SGDGTLHAWNIN 210 (271)
Q Consensus 199 ~~dg~i~iwd~~ 210 (271)
...+.|..++..
T Consensus 289 ~~~~~I~~~~~d 300 (430)
T 3tc9_A 289 VNQHYILRSDYD 300 (430)
T ss_dssp TTTTEEEEEEEE
T ss_pred CCCCEEEEEeCC
Confidence 557889998765
No 281
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.45 E-value=0.00047 Score=60.83 Aligned_cols=199 Identities=10% Similarity=-0.054 Sum_probs=118.6
Q ss_pred cceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCc----ceeEEEe--cCCcceEEEcCCCCEEEEE-ecCCeEEEE
Q 024185 45 KGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLA----SFQGILR--LRGRPTVAFDQQGLVFAVA-MEAGAIKLF 117 (271)
Q Consensus 45 ~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~----~~~~~~~--~~~~~~~~~~~~~~~l~~~-~~d~~i~i~ 117 (271)
......+++.+....+ +++-...+.|+.+++... .....+. ......+++.+.++.|+.+ ...+.|.+.
T Consensus 423 ~~~~~gl~~d~~~~~l----Y~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~ 498 (791)
T 3m0c_C 423 LRNVVALDTEVASNRI----YWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVA 498 (791)
T ss_dssp CSSEEEEEEETTTTEE----EEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEE
T ss_pred CCceEEEeecccCCee----EEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEE
Confidence 3445668888855543 345566788888888643 2222232 1234559999888666665 556799999
Q ss_pred eCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEec--CCeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEE
Q 024185 118 DSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTT--NNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYV 195 (271)
Q Consensus 118 d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~--d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 195 (271)
++..... ...+.........|++.|.+.+|+.+.. .+.|...++..... ..+... .-.....+++++.+..|
T Consensus 499 ~ldG~~~----~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~-~~lv~~-~l~~P~GLavD~~~~~L 572 (791)
T 3m0c_C 499 DTKGVKR----KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-YSLVTE-NIQWPNGITLDLLSGRL 572 (791)
T ss_dssp ETTSSSE----EEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE-EEEECS-SCSCEEEEEEETTTTEE
T ss_pred eCCCCeE----EEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCce-EEEEeC-CCCCceEEEEecCCCeE
Confidence 9876542 2222233456889999997666665543 37899999864433 333222 21347789999877777
Q ss_pred EEec-CCCcEEEEEcCCceeEEEecCC--cceeEEEEEecCCcEEEEeC---CeEEEEcCCCCCCC
Q 024185 196 VSGS-GDGTLHAWNINTRNEVACWNGN--IGVVACLKWAPRRAMFVAAS---SVLSFWIPNPSSNS 255 (271)
Q Consensus 196 ~~~~-~dg~i~iwd~~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~~~~---~~v~iw~~~~~~~~ 255 (271)
+.+. ..+.|...++........+... -....+|++. +..|+.+. +.|...+..+++..
T Consensus 573 YwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~--~~~lYwtD~~~~~I~~~dk~tG~~~ 636 (791)
T 3m0c_C 573 YWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRLTGSDV 636 (791)
T ss_dssp EEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE--TTEEEEEETTTTEEEEEETTTCCCC
T ss_pred EEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEe--CCEEEEEECCCCEEEEEeCCCCcce
Confidence 7664 4578999998644433333321 1223466664 33444443 66777776666443
No 282
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.40 E-value=5.7e-05 Score=65.55 Aligned_cols=185 Identities=13% Similarity=0.038 Sum_probs=107.3
Q ss_pred eEEecCCchhhhhhhhhhc-cCceEEEEEecCcceeEEEecC--C-cceEEEcCCCCEEEEEe-cC-----CeEEEEeCC
Q 024185 51 LFLSACLQLMIALCLVLLT-TALEYGIFVLMLASFQGILRLR--G-RPTVAFDQQGLVFAVAM-EA-----GAIKLFDSR 120 (271)
Q Consensus 51 ~~~s~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~--~-~~~~~~~~~~~~l~~~~-~d-----~~i~i~d~~ 120 (271)
.++.++++. ++.|+ .+..+.+||..+++....-..+ . ...++..++++.++.|+ .+ ..+.+||..
T Consensus 248 ~~~~~~g~l-----yv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~ 322 (656)
T 1k3i_A 248 ISMDGNGQI-----VVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPS 322 (656)
T ss_dssp EEECTTSCE-----EEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETT
T ss_pred ccCCCCCCE-----EEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCC
Confidence 556677877 55666 4568999999877644332222 1 23366677999888887 34 468999987
Q ss_pred CCCCCcc--------eE-------------EEecCCcc---------------------------------------ceE
Q 024185 121 SYDKGPF--------DT-------------FLVGGDTA---------------------------------------EVC 140 (271)
Q Consensus 121 ~~~~~~~--------~~-------------~~~~~~~~---------------------------------------~v~ 140 (271)
+.+...+ .. +.+.+..+ .-.
T Consensus 323 t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~ 402 (656)
T 1k3i_A 323 SKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGN 402 (656)
T ss_dssp TTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCE
T ss_pred CCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCc
Confidence 6542110 00 00000000 112
Q ss_pred EEEEcC-CCcEEEEEecCC-----------eEEEEECCCCeEEEEe--ecCCCCCceeeEEECCCCCEEEEecCC-----
Q 024185 141 DIKFSN-DGKSMLLTTTNN-----------NIYVLDAYGGEKRCGF--SLEPSPNTNTEATFTPDGQYVVSGSGD----- 201 (271)
Q Consensus 141 ~~~~s~-~~~~l~~~~~d~-----------~i~~~d~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d----- 201 (271)
++.|.. +++.++.|+.++ .+.+||..+.+-.... ..... ..-.+....|+++.++.|+.+
T Consensus 403 av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~-R~~~~~~~l~~g~i~v~GG~~~~~~~ 481 (656)
T 1k3i_A 403 AVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFA-RTFHTSVVLPDGSTFITGGQRRGIPF 481 (656)
T ss_dssp EEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSC-CBSCEEEECTTSCEEEECCBSBCCTT
T ss_pred eEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCC-cccCCeEECCCCCEEEECCcccCcCc
Confidence 333333 677777777532 6788888776544332 11111 122345677899999999864
Q ss_pred ------CcEEEEEcCCceeEEE--ecCCcceeEEEEEecCCcEEEEeC
Q 024185 202 ------GTLHAWNINTRNEVAC--WNGNIGVVACLKWAPRRAMFVAAS 241 (271)
Q Consensus 202 ------g~i~iwd~~~~~~~~~--~~~~~~~v~~~~~s~~~~~l~~~~ 241 (271)
..+.+||..+++-... +...........+.|||++++.|+
T Consensus 482 ~~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG 529 (656)
T 1k3i_A 482 EDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGG 529 (656)
T ss_dssp CCCSBCCCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEEC
T ss_pred CCCCcccceEEEcCCCCceeecCCCCCccccccHhhcCCCcEEEecCC
Confidence 4689999987654321 111122223445678999999987
No 283
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.33 E-value=0.00024 Score=55.77 Aligned_cols=179 Identities=10% Similarity=-0.013 Sum_probs=108.6
Q ss_pred ccCceEEEEEecCcc--eeEEEec-CCcceEEEcCCCCEEEEE-ecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEE
Q 024185 69 TTALEYGIFVLMLAS--FQGILRL-RGRPTVAFDQQGLVFAVA-MEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKF 144 (271)
Q Consensus 69 ~~dg~i~iwd~~~~~--~~~~~~~-~~~~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~ 144 (271)
+....|+..+++... ....+.. .....++|++.++.|+.+ ..++.|+.++....... ... +.........+++
T Consensus 10 ~~~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~--~~~-~~~~l~~p~glav 86 (318)
T 3sov_A 10 ANRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESV--QNV-VVSGLLSPDGLAC 86 (318)
T ss_dssp ECEEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCC--CEE-EEECCSCCCEEEE
T ss_pred EccCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCce--EEE-EcCCCCCccEEEE
Confidence 345678888887653 2222222 234458999866656555 55678999998765420 111 1112235667889
Q ss_pred cCCC-cEEEEEecCCeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEec--CCCcEEEEEcCCceeEEEecCC
Q 024185 145 SNDG-KSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGS--GDGTLHAWNINTRNEVACWNGN 221 (271)
Q Consensus 145 s~~~-~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~ 221 (271)
.+.+ +.+++-...+.|.++++.... ...+.. ........++++|.+.+|+.+. ..+.|...++............
T Consensus 87 d~~~g~ly~~d~~~~~I~~~~~dG~~-~~~l~~-~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~ 164 (318)
T 3sov_A 87 DWLGEKLYWTDSETNRIEVSNLDGSL-RKVLFW-QELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSE 164 (318)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSCS-CEEEEC-SSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSS
T ss_pred EcCCCeEEEEECCCCEEEEEECCCCc-EEEEEe-CCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECC
Confidence 8754 444554567899999986443 233321 1113367899999766666554 3578888887533322222223
Q ss_pred cceeEEEEEecCCcEEEEeC---CeEEEEcCCCC
Q 024185 222 IGVVACLKWAPRRAMFVAAS---SVLSFWIPNPS 252 (271)
Q Consensus 222 ~~~v~~~~~s~~~~~l~~~~---~~v~iw~~~~~ 252 (271)
-...+.++++|++..|..+. +.|..+|++..
T Consensus 165 l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~ 198 (318)
T 3sov_A 165 IYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGT 198 (318)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CCCccEEEEeccCCEEEEEECCCCEEEEEcCCCC
Confidence 34568999999777666664 77999998753
No 284
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.29 E-value=0.00055 Score=60.40 Aligned_cols=182 Identities=8% Similarity=-0.043 Sum_probs=109.5
Q ss_pred CceEEEEEecCcceeEEEecC-CcceEEEcCCCCEEEEE-ecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCC
Q 024185 71 ALEYGIFVLMLASFQGILRLR-GRPTVAFDQQGLVFAVA-MEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDG 148 (271)
Q Consensus 71 dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 148 (271)
...|+..++............ ....+++++.+..|+.+ ...+.|+.+++............+.........|++.+.+
T Consensus 403 ~~~Ir~i~l~~~~~~~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~ 482 (791)
T 3m0c_C 403 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIH 482 (791)
T ss_dssp BSSEEEECTTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTT
T ss_pred ccceeEeeccCCcceeeecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecC
Confidence 345666666555444444333 34458998866656555 4567898888875321001122333334567789999877
Q ss_pred cEEEEE-ecCCeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEecC--CCcEEEEEcCCceeEEEecCCccee
Q 024185 149 KSMLLT-TTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSG--DGTLHAWNINTRNEVACWNGNIGVV 225 (271)
Q Consensus 149 ~~l~~~-~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~v 225 (271)
..|+.+ ...+.|.+.++..... ..+.... ......++++|.+.+|+.+.. .+.|...++........+...-...
T Consensus 483 ~~LY~tD~~~~~I~v~~ldG~~~-~~l~~~~-l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P 560 (791)
T 3m0c_C 483 SNIYWTDSVLGTVSVADTKGVKR-KTLFREN-GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWP 560 (791)
T ss_dssp TEEEEEETTTTEEEEEETTSSSE-EEEEECT-TCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCE
T ss_pred CcEEEEecCCCeEEEEeCCCCeE-EEEEeCC-CCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCc
Confidence 555544 5578999999875443 3332211 123778999998666666543 3678888886444433344333567
Q ss_pred EEEEEecCCcEEEEeC---CeEEEEcCCCCCC
Q 024185 226 ACLKWAPRRAMFVAAS---SVLSFWIPNPSSN 254 (271)
Q Consensus 226 ~~~~~s~~~~~l~~~~---~~v~iw~~~~~~~ 254 (271)
..|++++.+..|+.+. +.|...+++....
T Consensus 561 ~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~ 592 (791)
T 3m0c_C 561 NGITLDLLSGRLYWVDSKLHSISSIDVNGGNR 592 (791)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred eEEEEecCCCeEEEEeCCCCcEEEEecCCCce
Confidence 8999998777666664 6688888866543
No 285
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.28 E-value=0.00012 Score=57.10 Aligned_cols=155 Identities=10% Similarity=0.185 Sum_probs=104.7
Q ss_pred cceEEEcCCCCEEEEEe-cCCeEEEEeCCCCCCCcceEEEecC----C--ccceEEEEE---cCCCcEEEEEec------
Q 024185 93 RPTVAFDQQGLVFAVAM-EAGAIKLFDSRSYDKGPFDTFLVGG----D--TAEVCDIKF---SNDGKSMLLTTT------ 156 (271)
Q Consensus 93 ~~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~----~--~~~v~~~~~---s~~~~~l~~~~~------ 156 (271)
..+..|++....|+.++ .+++|..||...+.. ....+.+ . ...+..+.| .|+++++++...
T Consensus 15 PE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~---~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~ 91 (334)
T 2p9w_A 15 PEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSH---FNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNF 91 (334)
T ss_dssp CSCEEEETTTTEEEEEETTTTEEEEECTTTCCE---EEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCT
T ss_pred CcCccCcCCCCEEEEEeccCCEEEEEcCCCCeE---EEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccc
Confidence 34589988666666665 789999999975542 1222222 1 124578999 688777775432
Q ss_pred -------CCeEEEEECC---CCeEEEEeecC----C-------CCCceeeEEECCCCCEEEEecCC-CcEEEEEcCCcee
Q 024185 157 -------NNNIYVLDAY---GGEKRCGFSLE----P-------SPNTNTEATFTPDGQYVVSGSGD-GTLHAWNINTRNE 214 (271)
Q Consensus 157 -------d~~i~~~d~~---~~~~~~~~~~~----~-------~~~~v~~~~~~~~~~~l~~~~~d-g~i~iwd~~~~~~ 214 (271)
+..+..||+. +++.+...... . .......++..++|+..++++.. +.|...+... +.
T Consensus 92 ~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG-~~ 170 (334)
T 2p9w_A 92 ADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADG-KT 170 (334)
T ss_dssp TSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTS-CC
T ss_pred cccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCC-CE
Confidence 6789999999 78776654421 0 11237789999999998888887 8877777653 33
Q ss_pred EEEe--cC----CcceeEEEEEecCCcEEEEeC--CeEEEEcCCC
Q 024185 215 VACW--NG----NIGVVACLKWAPRRAMFVAAS--SVLSFWIPNP 251 (271)
Q Consensus 215 ~~~~--~~----~~~~v~~~~~s~~~~~l~~~~--~~v~iw~~~~ 251 (271)
+..+ .. .....+.++++|+|+.|+... +.+..+|+..
T Consensus 171 ~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 171 VSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp EEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred EeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 3322 11 122357999999999888775 8899999873
No 286
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.25 E-value=0.00016 Score=59.44 Aligned_cols=148 Identities=14% Similarity=0.129 Sum_probs=91.0
Q ss_pred ceEEEcCC--CCEEEEEecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEecC----C-eEEEEECC
Q 024185 94 PTVAFDQQ--GLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTN----N-NIYVLDAY 166 (271)
Q Consensus 94 ~~~~~~~~--~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d----~-~i~~~d~~ 166 (271)
..++++|+ +..|+.+...+.|+.+|..+++. ..+.........++++++|+ |+.+... . .+...+..
T Consensus 142 ~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v-----~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~ 215 (433)
T 4hw6_A 142 WRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYV-----DIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRA 215 (433)
T ss_dssp CEEEECTTTTTCEEEEECBTSCEEEEETTTTEE-----EEECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGG
T ss_pred ceEEEccccCCCEEEEEeCCCCEEEEECCCCEE-----EEeecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECC
Confidence 34899985 45566665558899999977663 23333445689999999999 5555432 1 23333322
Q ss_pred CCeE-EEEeecCCCCCceeeEEECC-CCCEEEEecCCCcEEEEEcCCceeEEEe-c-CCcceeEEEEEecCCcEEEEeC-
Q 024185 167 GGEK-RCGFSLEPSPNTNTEATFTP-DGQYVVSGSGDGTLHAWNINTRNEVACW-N-GNIGVVACLKWAPRRAMFVAAS- 241 (271)
Q Consensus 167 ~~~~-~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~-~~~~~v~~~~~s~~~~~l~~~~- 241 (271)
.+.. ...+... .....++++| +|.+.++-..++.|+.+|..++.....+ . +....-..++|+|+++.|..+.
T Consensus 216 ~~~~~~~~~~~~---~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~ 292 (433)
T 4hw6_A 216 SGFTERLSLCNA---RGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYN 292 (433)
T ss_dssp GTTCCEEEEEEC---SSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEET
T ss_pred CCeecccccccc---CCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeC
Confidence 2111 0112111 1245588999 6776666666789999999877652322 1 1122234799999998655554
Q ss_pred --CeEEEEcCC
Q 024185 242 --SVLSFWIPN 250 (271)
Q Consensus 242 --~~v~iw~~~ 250 (271)
+.|+.++.+
T Consensus 293 ~~~~I~~~~~d 303 (433)
T 4hw6_A 293 GKHCIYRVDYN 303 (433)
T ss_dssp TTTEEEEEEBC
T ss_pred CCCEEEEEeCC
Confidence 678887765
No 287
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.25 E-value=0.00075 Score=52.68 Aligned_cols=195 Identities=14% Similarity=0.133 Sum_probs=119.1
Q ss_pred EeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEE-Eec-----CC---cceEEE---cCCCCEEEEEec------
Q 024185 49 RGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGI-LRL-----RG---RPTVAF---DQQGLVFAVAME------ 110 (271)
Q Consensus 49 ~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~-~~~-----~~---~~~~~~---~~~~~~l~~~~~------ 110 (271)
.+..|.+....+ +++.-..++|..||...+..... +.. .+ ...+.| .|+++++++...
T Consensus 16 E~~~wd~~~g~~----~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~ 91 (334)
T 2p9w_A 16 EDTIYDRTRQVF----YQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNF 91 (334)
T ss_dssp SCEEEETTTTEE----EEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCT
T ss_pred cCccCcCCCCEE----EEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccc
Confidence 357787754442 34555789999999976644333 221 11 234899 688777775432
Q ss_pred -------CCeEEEEeCC---CCCCCcceEEEecCC-----------ccceEEEEEcCCCcEEEEEecC-CeEEEEECCCC
Q 024185 111 -------AGAIKLFDSR---SYDKGPFDTFLVGGD-----------TAEVCDIKFSNDGKSMLLTTTN-NNIYVLDAYGG 168 (271)
Q Consensus 111 -------d~~i~i~d~~---~~~~~~~~~~~~~~~-----------~~~v~~~~~s~~~~~l~~~~~d-~~i~~~d~~~~ 168 (271)
+..|..||+. +++. .....+... ......++..++|+..++++.. +.|...+.. +
T Consensus 92 ~g~~~~g~~~v~~~Dl~~~~tg~~--~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pd-G 168 (334)
T 2p9w_A 92 ADQSSHGASSFHSFNLPLSENSKP--VWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSAD-G 168 (334)
T ss_dssp TSCCSSSCCEEEEEESSCCTTCCC--SEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTT-S
T ss_pred cccccCCCCEEEEEcCCcCCCCCE--EEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCC-C
Confidence 5779999998 6665 223333211 1348899999999999988888 888888854 3
Q ss_pred eEEEEeecCC----CCCceeeEEECCCCCEEEEecCCCcEEEEEcCCcee--EEEec--CC---cceeEEE-EEecCCcE
Q 024185 169 EKRCGFSLEP----SPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNE--VACWN--GN---IGVVACL-KWAPRRAM 236 (271)
Q Consensus 169 ~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~--~~~~~--~~---~~~v~~~-~~s~~~~~ 236 (271)
+.+..+.... .....+.++++|+|+.|++....|.+..+|+.+... +. .. +. -.....+ .--.+|+.
T Consensus 169 ~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~~~v~-~~~~G~~~~~~~~dgilp~~~~G~v 247 (334)
T 2p9w_A 169 KTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYAWPEP-VKINGDFGTLSGTEKIVTVPVGNES 247 (334)
T ss_dssp CCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSCCCEE-CEESSCCCCCTTEEEEEEEEETTEE
T ss_pred CEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcceeec-ccccCCcccccCcccccccccCCEE
Confidence 3333322111 112356799999999888877799999999885433 21 11 21 1112333 33347777
Q ss_pred EEEeC---CeEEEEcCCC
Q 024185 237 FVAAS---SVLSFWIPNP 251 (271)
Q Consensus 237 l~~~~---~~v~iw~~~~ 251 (271)
++.++ +.+.+.+.+.
T Consensus 248 llV~~~~~~~~~l~S~Dg 265 (334)
T 2p9w_A 248 VLVGARAPYAISFRSWDN 265 (334)
T ss_dssp EEEEEETTEEEEEECSST
T ss_pred EEEEcCCCCEEEEECCCC
Confidence 44443 4455555444
No 288
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.21 E-value=0.0012 Score=52.09 Aligned_cols=195 Identities=11% Similarity=0.104 Sum_probs=116.8
Q ss_pred EEee-ecceeeEEEEeeccceeeEEEEEcccccceEEeeEEecC----Cchhhhhhhhhhcc--CceEEEEEec--Ccce
Q 024185 14 LLFA-RQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSAC----LQLMIALCLVLLTT--ALEYGIFVLM--LASF 84 (271)
Q Consensus 14 l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~----~~~~~~~~l~s~~~--dg~i~iwd~~--~~~~ 84 (271)
++++ ...+.+..++. .+ ..++.+.. +..+.+.+-|+ ++.. ...+++.-. +++|.+|++. ++.
T Consensus 42 ~ii~t~k~~gL~Vydl-~G----~~l~~~~~--g~~nnVD~r~~~~l~g~~~-dla~as~R~~~~n~l~vf~iDp~~~~- 112 (355)
T 3amr_A 42 KLITTNKKSGLVVYSL-DG----KMLHSYNT--GKLNNVDIRYDFPLNGKKV-DIAAASNRSEGKNTIEIYAIDGKNGT- 112 (355)
T ss_dssp EEEEEETTTEEEEEET-TS----CEEEEECC--SCEEEEEEEEEEEETTEEE-EEEEEEECSTTCCEEEEEEECTTTCC-
T ss_pred EEEEEcCCCCEEEEcC-CC----cEEEEccC--CCcccEEEecccccCCceE-eEEEEeCCCCCCCeEEEEEECCCCCc-
Confidence 3444 45677777777 55 34444432 45565655552 2221 001345555 6899999774 333
Q ss_pred eEEEec---------CCcceEEE--cCC-CC-EEEEEecCCeEEEEeCCC---CCCCcceEEEecCCccceEEEEEcCCC
Q 024185 85 QGILRL---------RGRPTVAF--DQQ-GL-VFAVAMEAGAIKLFDSRS---YDKGPFDTFLVGGDTAEVCDIKFSNDG 148 (271)
Q Consensus 85 ~~~~~~---------~~~~~~~~--~~~-~~-~l~~~~~d~~i~i~d~~~---~~~~~~~~~~~~~~~~~v~~~~~s~~~ 148 (271)
+..+.. .....+++ +|. ++ ++++...+|.+..|++.. ++........+.- .+.+..+...+..
T Consensus 113 l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~ 191 (355)
T 3amr_A 113 LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEY 191 (355)
T ss_dssp EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTT
T ss_pred eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCC
Confidence 444411 22344777 774 44 677788889999998843 2221111222222 2467888899988
Q ss_pred cEEEEEecCCeEEEEECC-----CCeEEEEeecCCCCCceeeEEE--CCCCC-EEEEec-CCCcEEEEEcC-CceeEEEe
Q 024185 149 KSMLLTTTNNNIYVLDAY-----GGEKRCGFSLEPSPNTNTEATF--TPDGQ-YVVSGS-GDGTLHAWNIN-TRNEVACW 218 (271)
Q Consensus 149 ~~l~~~~~d~~i~~~d~~-----~~~~~~~~~~~~~~~~v~~~~~--~~~~~-~l~~~~-~dg~i~iwd~~-~~~~~~~~ 218 (271)
..|+.+-++..|..++.+ +++.+..+....-...+..+++ .++++ +|++++ .+++..+||.. +.+.+..+
T Consensus 192 g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f 271 (355)
T 3amr_A 192 GRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADF 271 (355)
T ss_dssp TEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEE
T ss_pred CeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEE
Confidence 899999998888888865 3455554432211123677777 56666 666655 46799999996 66666666
No 289
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.19 E-value=0.00072 Score=51.08 Aligned_cols=156 Identities=11% Similarity=0.119 Sum_probs=97.9
Q ss_pred cceEEEcCCCCEEEE-EecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEecCCeEEEEECCCCeE-
Q 024185 93 RPTVAFDQQGLVFAV-AMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEK- 170 (271)
Q Consensus 93 ~~~~~~~~~~~~l~~-~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~~~~~- 170 (271)
...++++|+++.|++ ...++.|...|.. ++. .....+.+. .....+++.+++.++++.-.++.+.++++.....
T Consensus 29 lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v--~~~i~l~g~-~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i 104 (255)
T 3qqz_A 29 ISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDL--IRTIPLDFV-KDLETIEYIGDNQFVISDERDYAIYVISLTPNSEV 104 (255)
T ss_dssp EEEEEEETTTTEEEEEEETTEEEEEEETT-CCE--EEEEECSSC-SSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCE
T ss_pred cceeEEeCCCCEEEEEECCCCeEEEEeCC-CCE--EEEEecCCC-CChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCee
Confidence 455999998765554 6677889999987 553 334444432 5678889999988666655678899998765432
Q ss_pred --EEEeec----CCCCCceeeEEECCCCCEEEEecCCCcEEEEEcC---CceeEEEec-------CCcceeEEEEEecCC
Q 024185 171 --RCGFSL----EPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNIN---TRNEVACWN-------GNIGVVACLKWAPRR 234 (271)
Q Consensus 171 --~~~~~~----~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~---~~~~~~~~~-------~~~~~v~~~~~s~~~ 234 (271)
+..... .........++|+|.++.|.++.+.....+|.+. ....+..+. .+...+.+++++|..
T Consensus 105 ~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~t 184 (255)
T 3qqz_A 105 KILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQK 184 (255)
T ss_dssp EEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTT
T ss_pred eeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCC
Confidence 233221 1122346789999999888777765555555543 111122221 123356899999965
Q ss_pred c-EEEEeC--CeEEEEcCCCC
Q 024185 235 A-MFVAAS--SVLSFWIPNPS 252 (271)
Q Consensus 235 ~-~l~~~~--~~v~iw~~~~~ 252 (271)
. +++... ..+.++|....
T Consensus 185 g~lliLS~~s~~L~~~d~~g~ 205 (255)
T 3qqz_A 185 NTLLVLSHESRALQEVTLVGE 205 (255)
T ss_dssp TEEEEEETTTTEEEEECTTCC
T ss_pred CeEEEEECCCCeEEEEcCCCC
Confidence 4 444443 66888886654
No 290
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.15 E-value=0.0027 Score=54.63 Aligned_cols=199 Identities=11% Similarity=-0.047 Sum_probs=116.1
Q ss_pred cceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcce-eEEEec--CCcceEEEcCCCCEEEEE-ecCCeEEEEeCC
Q 024185 45 KGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASF-QGILRL--RGRPTVAFDQQGLVFAVA-MEAGAIKLFDSR 120 (271)
Q Consensus 45 ~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~-~~~~~~--~~~~~~~~~~~~~~l~~~-~~d~~i~i~d~~ 120 (271)
-+....+++++.+..+ +++-...+.|..++++.... ...+.. .....+++.+.++.|+.+ ..++.|.+.++.
T Consensus 39 ~~~~~~ld~~~~~~~l----y~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~d 114 (619)
T 3s94_A 39 LEDAAAVDFVFSHGLI----YWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLD 114 (619)
T ss_dssp CSCEEEEEEETTTTEE----EEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCceEEEEEEeCCCEE----EEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECC
Confidence 3445668899866653 33545567888888865432 222322 234559999977666665 556899999997
Q ss_pred CCCCCcceEEEecCCccceEEEEEcCCCcEEEEEec--CCeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEe
Q 024185 121 SYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTT--NNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSG 198 (271)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~--d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 198 (271)
.... .......-.....+++.|.+..|+.+.. .+.|...++.. .....+.... -.....++++++++.|+.+
T Consensus 115 G~~~----~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG-~~~~~l~~~~-~~~P~Glald~~~~~LY~a 188 (619)
T 3s94_A 115 GSLR----KVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDG-SSRFIIINSE-IYWPNGLTLDYEEQKLYWA 188 (619)
T ss_dssp SCSC----EEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTS-CSCEEEECSS-CSSEEEEEEETTTTEEEEE
T ss_pred CCCE----EEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCC-CceEEEEeCC-CCCCcEEEEEccCCEEEEE
Confidence 6543 2222234456778999997555655543 46777777653 3233332111 2346789999987766655
Q ss_pred -cCCCcEEEEEcCCceeEEEecCCcceeEEEEEecCCcEEEEeC---CeEEEEcCCCCCCC
Q 024185 199 -SGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS---SVLSFWIPNPSSNS 255 (271)
Q Consensus 199 -~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~---~~v~iw~~~~~~~~ 255 (271)
...+.|...|+..........+......++++..+ .|..+. +.|...|..+++..
T Consensus 189 D~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~--~ly~td~~~~~V~~~d~~tg~~~ 247 (619)
T 3s94_A 189 DAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED--ILYWTDWSTHSILACNKYTGEGL 247 (619)
T ss_dssp ETTTCCEEEESSSCCEEC---------CCCEEESSS--EEEEECTTTCSEEEEESSSCCCC
T ss_pred eCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCC--EEEEecCCCCEEEEEECCCCccc
Confidence 44678999998654333222212222356777655 455554 66888888777644
No 291
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.14 E-value=1.2e-05 Score=70.10 Aligned_cols=177 Identities=8% Similarity=-0.019 Sum_probs=104.1
Q ss_pred cCceEEEEEecCcceeEEEec-CCcceEEEcCCCCEEEEE-ecCCeEEEEeCCC----CCCCcceEEEecCCccceEEEE
Q 024185 70 TALEYGIFVLMLASFQGILRL-RGRPTVAFDQQGLVFAVA-MEAGAIKLFDSRS----YDKGPFDTFLVGGDTAEVCDIK 143 (271)
Q Consensus 70 ~dg~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~-~~d~~i~i~d~~~----~~~~~~~~~~~~~~~~~v~~~~ 143 (271)
..+.|+..++++.+....+.. .....++|++.+..|+.+ ...+.|+.+++.. ... ...+.........++
T Consensus 384 ~~~~I~~id~~~~~~~~~~~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~----~~~i~~~~~~P~gla 459 (699)
T 1n7d_A 384 NRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSY----DTVISRDIQAPDGLA 459 (699)
T ss_dssp CTTC-CEECTTSCCEECCSCCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCC----CCBCCSCC--CCCEE
T ss_pred CccceEEEeCCCCcceeeeccCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcce----EEEEeCCCCCcceEE
Confidence 445778888876665444433 234558999887777766 4457899999875 221 111111122345678
Q ss_pred EcCCC-cEEEEEecCCeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEecC--CCcEEEEEcCCceeEEEecC
Q 024185 144 FSNDG-KSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSG--DGTLHAWNINTRNEVACWNG 220 (271)
Q Consensus 144 ~s~~~-~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~ 220 (271)
+.+.+ +++++-...+.|.++++........+.... .....++++|.+.+|+.+.. .+.|..+++........+..
T Consensus 460 vD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~--~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~ 537 (699)
T 1n7d_A 460 VDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQG--SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE 537 (699)
T ss_dssp CCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSS--CCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCS
T ss_pred EEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCC--CCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeC
Confidence 88644 444444457889999987554333232211 22566899997666665543 26788887753322222222
Q ss_pred CcceeEEEEEecCCcEEEEeC---CeEEEEcCCCC
Q 024185 221 NIGVVACLKWAPRRAMFVAAS---SVLSFWIPNPS 252 (271)
Q Consensus 221 ~~~~v~~~~~s~~~~~l~~~~---~~v~iw~~~~~ 252 (271)
.-...+.|+|+|++..|..+. +.|..+++...
T Consensus 538 ~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~ 572 (699)
T 1n7d_A 538 NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 572 (699)
T ss_dssp SCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSS
T ss_pred CCCCccEEEEeccCCEEEEEecCCCeEEEEccCCC
Confidence 233457899999866555554 67999998754
No 292
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.13 E-value=0.00027 Score=58.57 Aligned_cols=149 Identities=13% Similarity=0.130 Sum_probs=91.6
Q ss_pred eEEEcC-CCCEEEEEec-CCeEEEEeCCCCCCCcceEEEecC---CccceEEEEE-------cCCCcEEEEEecCC----
Q 024185 95 TVAFDQ-QGLVFAVAME-AGAIKLFDSRSYDKGPFDTFLVGG---DTAEVCDIKF-------SNDGKSMLLTTTNN---- 158 (271)
Q Consensus 95 ~~~~~~-~~~~l~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~---~~~~v~~~~~-------s~~~~~l~~~~~d~---- 158 (271)
.++|+| ++..|+++.. .+.|++.|.+++.. ...... .......++| +++++.|+++...+
T Consensus 143 ~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v----~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~ 218 (496)
T 3kya_A 143 RLAFDPLNKDHLYICYDGHKAIQLIDLKNRML----SSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGD 218 (496)
T ss_dssp EEEEETTEEEEEEEEEETEEEEEEEETTTTEE----EEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGG
T ss_pred EEEEccCCCCEEEEEECCCCeEEEEECCCCEE----EEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcc
Confidence 489998 4555555543 46788999887663 211211 1235889999 99999777776543
Q ss_pred ---eEEEEECCC-CeEE-----EEeecCCCCCceeeEEECCC-CCEEEEecCCCcEEEEEcC-------Ccee-------
Q 024185 159 ---NIYVLDAYG-GEKR-----CGFSLEPSPNTNTEATFTPD-GQYVVSGSGDGTLHAWNIN-------TRNE------- 214 (271)
Q Consensus 159 ---~i~~~d~~~-~~~~-----~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~-------~~~~------- 214 (271)
.+.+++... ++.. ..+....+ ...++++|+ +.++++-..++.|..+|+. ++..
T Consensus 219 ~~~~V~~i~r~~~G~~~~~~~~~~v~~~~~---p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~ 295 (496)
T 3kya_A 219 ESPSVYIIKRNADGTFDDRSDIQLIAAYKQ---CNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKN 295 (496)
T ss_dssp GEEEEEEEECCTTSCCSTTSCEEEEEEESC---CCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGG
T ss_pred cCceEEEEecCCCCceeecccceeeccCCC---ceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccc
Confidence 366776433 2221 22222222 445889995 5555556667889999997 4543
Q ss_pred ----EEE-e-cCCcceeEEEEEecCCcEEEEeC---CeEEEEcCC
Q 024185 215 ----VAC-W-NGNIGVVACLKWAPRRAMFVAAS---SVLSFWIPN 250 (271)
Q Consensus 215 ----~~~-~-~~~~~~v~~~~~s~~~~~l~~~~---~~v~iw~~~ 250 (271)
... + .+.......++|+|+|++|..+. ..|+.++..
T Consensus 296 ~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~d 340 (496)
T 3kya_A 296 NPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYD 340 (496)
T ss_dssp CTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred cccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecC
Confidence 112 1 12234467999999999655553 668886553
No 293
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.09 E-value=0.0021 Score=53.32 Aligned_cols=158 Identities=11% Similarity=0.126 Sum_probs=92.0
Q ss_pred EEeeEEecC-CchhhhhhhhhhccCceEEEEEecCcceeEEEecCC-----cceEEE-------cCCCCEEEEEecCC--
Q 024185 48 RRGLFLSAC-LQLMIALCLVLLTTALEYGIFVLMLASFQGILRLRG-----RPTVAF-------DQQGLVFAVAMEAG-- 112 (271)
Q Consensus 48 v~~~~~s~~-~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-----~~~~~~-------~~~~~~l~~~~~d~-- 112 (271)
...++++|. ...+ +++....+.|++.|.+++.......... ...++| ++++++|+++...+
T Consensus 141 p~~la~dp~~~~~L----yv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~ 216 (496)
T 3kya_A 141 NGRLAFDPLNKDHL----YICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGK 216 (496)
T ss_dssp EEEEEEETTEEEEE----EEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTT
T ss_pred CCEEEEccCCCCEE----EEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCC
Confidence 446888883 4432 2333445678888888777654443321 345999 99999777776544
Q ss_pred -----eEEEEeCCC-CCCCc-ceEEEecCCccceEEEEEcCCCcEE-EEEecCCeEEEEECC-------CCeE-------
Q 024185 113 -----AIKLFDSRS-YDKGP-FDTFLVGGDTAEVCDIKFSNDGKSM-LLTTTNNNIYVLDAY-------GGEK------- 170 (271)
Q Consensus 113 -----~i~i~d~~~-~~~~~-~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~d~~i~~~d~~-------~~~~------- 170 (271)
.|.+++... +.... .....+.. ......++.+|++..| ++-..++.|..+|+. +++.
T Consensus 217 ~~~~~~V~~i~r~~~G~~~~~~~~~~v~~-~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~ 295 (496)
T 3kya_A 217 GDESPSVYIIKRNADGTFDDRSDIQLIAA-YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKN 295 (496)
T ss_dssp GGGEEEEEEEECCTTSCCSTTSCEEEEEE-ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGG
T ss_pred cccCceEEEEecCCCCceeecccceeecc-CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccc
Confidence 366776443 22210 00011111 1234577889954444 455568889999987 5543
Q ss_pred ----EEEeecCCCCCceeeEEECCCCCEEEEe-cCCCcEEEEEcC
Q 024185 171 ----RCGFSLEPSPNTNTEATFTPDGQYVVSG-SGDGTLHAWNIN 210 (271)
Q Consensus 171 ----~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~iwd~~ 210 (271)
...+...........++|+|+|++|+.+ +..+.|+.++..
T Consensus 296 ~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~d 340 (496)
T 3kya_A 296 NPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYD 340 (496)
T ss_dssp CTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred cccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecC
Confidence 1121111112235679999999965444 556788886653
No 294
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.06 E-value=4e-05 Score=66.87 Aligned_cols=175 Identities=11% Similarity=-0.034 Sum_probs=100.4
Q ss_pred EEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEec--CCcceEEEcCCCCEEEEEec--CCeEEEEeCCCCC
Q 024185 48 RRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILRL--RGRPTVAFDQQGLVFAVAME--AGAIKLFDSRSYD 123 (271)
Q Consensus 48 v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~--d~~i~i~d~~~~~ 123 (271)
...+++.+.+..+ +++-...+.|.+++++.......+.. .....++++|.+.+|+.+.. .+.|..+++....
T Consensus 455 P~glavD~~~g~L----Y~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~ 530 (699)
T 1n7d_A 455 PDGLAVDWIHSNI----YWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD 530 (699)
T ss_dssp CCCEECCCSSSBC----EECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCC
T ss_pred cceEEEEeeCCcE----EEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCC
Confidence 3456776544432 33555677898988865543333322 23455999997766666542 2678888776543
Q ss_pred CCcceEEEecCCccceEEEEEcCCCcEEEEE-ecCCeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEecCCC
Q 024185 124 KGPFDTFLVGGDTAEVCDIKFSNDGKSMLLT-TTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDG 202 (271)
Q Consensus 124 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 202 (271)
. .......-.....|+|+|++..|+.+ +..+.|..+|+........+...........+++..+ .++++....+
T Consensus 531 ~----~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~ 605 (699)
T 1n7d_A 531 I----YSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINE 605 (699)
T ss_dssp C----CEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTT
T ss_pred e----eEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCC
Confidence 2 11111222346679999976666555 4577899999864332222221111112334566544 3444555578
Q ss_pred cEEEEEcCCceeEEEecCCcceeEEEEEe
Q 024185 203 TLHAWNINTRNEVACWNGNIGVVACLKWA 231 (271)
Q Consensus 203 ~i~iwd~~~~~~~~~~~~~~~~v~~~~~s 231 (271)
.|..+|..+++.+..+.........+++.
T Consensus 606 ~V~~~d~~~G~~~~~i~~~~~~P~~i~v~ 634 (699)
T 1n7d_A 606 AIFSANRLTGSDVNLLAENLLSPEDMVLF 634 (699)
T ss_dssp CEEEEETTTEEEEECCCTTCSSCCCCCBC
T ss_pred eEEEEEccCCCceEEeecCCCCCcEEEEe
Confidence 99999988888877764332234445443
No 295
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.03 E-value=0.0028 Score=49.87 Aligned_cols=189 Identities=10% Similarity=0.025 Sum_probs=104.6
Q ss_pred ceEEeeEEecCCchhhhhhhhhhccCceEEEEEec-CcceeEEEec---CCcceEEEcCCCCEEEEEecCCeEEEEeCCC
Q 024185 46 GIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLM-LASFQGILRL---RGRPTVAFDQQGLVFAVAMEAGAIKLFDSRS 121 (271)
Q Consensus 46 ~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~ 121 (271)
+.+..+.+.+++.. ++.+ .+|.+ |-.. .++.-..... .....+++.+++.+++++. +|.++.-+-..
T Consensus 122 ~~~~~i~~~~~~~~-----~~~~-~~g~v--~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~-~G~~~~S~d~g 192 (327)
T 2xbg_A 122 GSPRLIKALGNGSA-----EMIT-NVGAI--YRTKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSS-RGSFYSTWEPG 192 (327)
T ss_dssp SCEEEEEEEETTEE-----EEEE-TTCCE--EEESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEET-TSSEEEEECTT
T ss_pred CCeEEEEEECCCCE-----EEEe-CCccE--EEEcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEEC-CCcEEEEeCCC
Confidence 34566776666664 3333 34543 3222 2433222221 1345588899888776664 45554432111
Q ss_pred CCCCcceEEEecCCccceEEEEEcCCCcEEEEEecCCeEEEEECCCCeEEEEeecC--CCCCceeeEEECCCCCEEEEec
Q 024185 122 YDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLE--PSPNTNTEATFTPDGQYVVSGS 199 (271)
Q Consensus 122 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~ 199 (271)
++. ..... ......+..+.+.++++.+ .++.+|.+++.+...++.-..+... .....+..+.+.++++.++.+.
T Consensus 193 G~t--W~~~~-~~~~~~~~~~~~~~~g~~~-~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~ 268 (327)
T 2xbg_A 193 QTA--WEPHN-RTTSRRLHNMGFTPDGRLW-MIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG 268 (327)
T ss_dssp CSS--CEEEE-CCSSSCEEEEEECTTSCEE-EEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES
T ss_pred CCc--eeECC-CCCCCccceeEECCCCCEE-EEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC
Confidence 221 11222 2345678899999988754 5566788877643324332222211 1112377888998888777655
Q ss_pred CCCcEEEEEcCCceeEEEec---CCcceeEEEEEecCCcEEEEeC-CeEEEEcC
Q 024185 200 GDGTLHAWNINTRNEVACWN---GNIGVVACLKWAPRRAMFVAAS-SVLSFWIP 249 (271)
Q Consensus 200 ~dg~i~iwd~~~~~~~~~~~---~~~~~v~~~~~s~~~~~l~~~~-~~v~iw~~ 249 (271)
+|.+ .+....++.-..+. .....+.++.|.++++.++.+. |.|.-++-
T Consensus 269 -~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 269 -AGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQGFILGQKGILLRYVT 320 (327)
T ss_dssp -TTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETTEEEEECSTTEEEEECC
T ss_pred -CCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCCceEEEcCCceEEEEcC
Confidence 5666 34444455444443 1234678899987887777776 77766653
No 296
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.01 E-value=0.0055 Score=52.77 Aligned_cols=226 Identities=10% Similarity=-0.019 Sum_probs=135.7
Q ss_pred eEEeeecceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEec--
Q 024185 13 ALLFARQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILRL-- 90 (271)
Q Consensus 13 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-- 90 (271)
.|+|+ ....+..++....... ....+.+ -.....+++++.+..+ +++-..++.|+.++++.......+..
T Consensus 8 ~Ll~s-~~~~I~~i~l~~~~~~--~~~~~~~-~~~~~~l~~d~~~~~l----ywtD~~~~~I~r~~~~g~~~~~v~~~g~ 79 (628)
T 4a0p_A 8 FLLFS-RRADIRRISLETNNNN--VAIPLTG-VKEASALDFDVTDNRI----YWTDISLKTISRAFMNGSALEHVVEFGL 79 (628)
T ss_dssp EEEEE-ETTEEEEEESSCTTCE--EECCCCS-CSCEEEEEEETTTTEE----EEEETTTTEEEEEETTSCSCEEEECSSC
T ss_pred EEEEE-eCCcEEEEECCCCCcc--eEEEcCC-CCceEEEEEECCCCEE----EEEECCCCeEEEEECCCCCcEEEEeCCC
Confidence 34444 4667777766543221 1111222 2456679999876654 34666788899888865544333332
Q ss_pred CCcceEEEcCCCCEEEEE-ecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEe--cCCeEEEEECCC
Q 024185 91 RGRPTVAFDQQGLVFAVA-MEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTT--TNNNIYVLDAYG 167 (271)
Q Consensus 91 ~~~~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~d~~i~~~d~~~ 167 (271)
.....+++.+.++.|+.+ ...+.|.+.++..... .......-.....+++.|....|+.+. ..+.|...++..
T Consensus 80 ~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~----~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG 155 (628)
T 4a0p_A 80 DYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHR----QVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDG 155 (628)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTC----EEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS
T ss_pred CCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcE----EEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCC
Confidence 234558998877666655 4567899999876543 222223345678999999655555554 257888888764
Q ss_pred CeEEEEeecCCCCCceeeEEECCCCCEEEEec-CCCcEEEEEcCCceeEEEecCCcceeEEEEEecCCcEEEEeC--CeE
Q 024185 168 GEKRCGFSLEPSPNTNTEATFTPDGQYVVSGS-GDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVL 244 (271)
Q Consensus 168 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~~v 244 (271)
... ..+... -.....++++++++.|+.+. ..+.|...|+..... ..+........++++.. +.++++-. +.|
T Consensus 156 ~~~-~~l~~~--~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P~glav~~-~~ly~tD~~~~~I 230 (628)
T 4a0p_A 156 SER-TTLVPN--VGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADDLPHPFGLTQYQ-DYIYWTDWSRRSI 230 (628)
T ss_dssp CSC-EEEECS--CSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECCSCEEEEEEET-TEEEEEETTTTEE
T ss_pred Cce-EEEECC--CCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeeccCCCceEEEEEC-CEEEEecCCCCEE
Confidence 433 332222 23477899999877776664 467899999865433 33322223345777765 34444432 778
Q ss_pred EEEcCCCCCCC
Q 024185 245 SFWIPNPSSNS 255 (271)
Q Consensus 245 ~iw~~~~~~~~ 255 (271)
...|..+++..
T Consensus 231 ~~~dk~tg~~~ 241 (628)
T 4a0p_A 231 ERANKTSGQNR 241 (628)
T ss_dssp EEEETTTCCSC
T ss_pred EEEECCCCCce
Confidence 88887766543
No 297
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.99 E-value=0.0028 Score=49.07 Aligned_cols=181 Identities=12% Similarity=0.022 Sum_probs=95.0
Q ss_pred hhhhccC-----ceEEEEEecCcc---eeEEEecC--CcceEEEcCCCCEEEEEecC-----CeEEEEeCCCCCCCcceE
Q 024185 65 LVLLTTA-----LEYGIFVLMLAS---FQGILRLR--GRPTVAFDQQGLVFAVAMEA-----GAIKLFDSRSYDKGPFDT 129 (271)
Q Consensus 65 l~s~~~d-----g~i~iwd~~~~~---~~~~~~~~--~~~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~ 129 (271)
++.|+.+ ..+.+||..+++ ....-... .....+...+++.++.|+.+ ..+.+||..+.+. ...
T Consensus 66 ~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W--~~~ 143 (301)
T 2vpj_A 66 YVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQW--SML 143 (301)
T ss_dssp EEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEE--EEE
T ss_pred EEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeE--EEC
Confidence 4455543 468889987766 33222111 11112222266777777543 3688999887664 112
Q ss_pred EEecCCccceEEEEEcCCCcEEEEEecC-----CeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEecCC---
Q 024185 130 FLVGGDTAEVCDIKFSNDGKSMLLTTTN-----NNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGD--- 201 (271)
Q Consensus 130 ~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--- 201 (271)
..+.........+.+ +++.++.|+.+ ..+..||..+.+-...-...........+. -+++.++.|+.+
T Consensus 144 ~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~ 219 (301)
T 2vpj_A 144 GDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVAL--LNDHIYVVGGFDGTA 219 (301)
T ss_dssp EECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSS
T ss_pred CCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEE--ECCEEEEEeCCCCCc
Confidence 222211112222222 67777777654 468999988876443311111111111122 256777777764
Q ss_pred --CcEEEEEcCCceeEEE--ecCCcceeEEEEEecCCcEEEEeC-------CeEEEEcCCCCC
Q 024185 202 --GTLHAWNINTRNEVAC--WNGNIGVVACLKWAPRRAMFVAAS-------SVLSFWIPNPSS 253 (271)
Q Consensus 202 --g~i~iwd~~~~~~~~~--~~~~~~~v~~~~~s~~~~~l~~~~-------~~v~iw~~~~~~ 253 (271)
..+.+||+.+.+-... +....... ++ ..-++++++.|+ ..+.+||+++.+
T Consensus 220 ~~~~v~~yd~~~~~W~~~~~~p~~r~~~-~~-~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 220 HLSSVEAYNIRTDSWTTVTSMTTPRCYV-GA-TVLRGRLYAIAGYDGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp BCCCEEEEETTTTEEEEECCCSSCCBSC-EE-EEETTEEEEECCBCSSSBEEEEEEEETTTTE
T ss_pred ccceEEEEeCCCCcEEECCCCCCcccce-eE-EEECCEEEEEcCcCCCcccccEEEEcCCCCe
Confidence 4689999987654432 22111111 22 223677777775 347888887654
No 298
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.97 E-value=0.0061 Score=52.52 Aligned_cols=178 Identities=10% Similarity=0.017 Sum_probs=113.4
Q ss_pred ccCceEEEEEecCcceeEEEecC---CcceEEEcCCCCEEEEE-ecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEE
Q 024185 69 TTALEYGIFVLMLASFQGILRLR---GRPTVAFDQQGLVFAVA-MEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKF 144 (271)
Q Consensus 69 ~~dg~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~ 144 (271)
+....|+..++++......+... ....++|++.+..|+.+ ..++.|+.+++..... ...+.........+++
T Consensus 12 s~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~----~~v~~~g~~~P~GlAv 87 (628)
T 4a0p_A 12 SRRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSAL----EHVVEFGLDYPEGMAV 87 (628)
T ss_dssp EETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC----EEEECSSCSCCCEEEE
T ss_pred EeCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCc----EEEEeCCCCCcceEEE
Confidence 35567888888766544444322 34459999977766665 4568999999876543 2222222245678889
Q ss_pred cCCCcEEEEE-ecCCeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEec--CCCcEEEEEcCCceeEEEecCC
Q 024185 145 SNDGKSMLLT-TTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGS--GDGTLHAWNINTRNEVACWNGN 221 (271)
Q Consensus 145 s~~~~~l~~~-~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~ 221 (271)
.+.+..|+.+ ...+.|.+.++..... ..+.. ..-.....++++|...+|+... ..+.|...++.......... .
T Consensus 88 D~~~~~LY~tD~~~~~I~v~~~dG~~~-~~l~~-~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~-~ 164 (628)
T 4a0p_A 88 DWLGKNLYWADTGTNRIEVSKLDGQHR-QVLVW-KDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVP-N 164 (628)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSTTC-EEEEC-SSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC-S
T ss_pred EeCCCEEEEEECCCCEEEEEecCCCcE-EEEEe-CCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEEC-C
Confidence 8765555444 4578899999865432 22221 1113367899999665666554 25678888876443333333 3
Q ss_pred cceeEEEEEecCCcEEEEeC---CeEEEEcCCCCC
Q 024185 222 IGVVACLKWAPRRAMFVAAS---SVLSFWIPNPSS 253 (271)
Q Consensus 222 ~~~v~~~~~s~~~~~l~~~~---~~v~iw~~~~~~ 253 (271)
-.....+++++++..|..+. +.|...+++...
T Consensus 165 ~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~ 199 (628)
T 4a0p_A 165 VGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLN 199 (628)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred CCCcceEEEccccCEEEEEECCCCEEEEEcCCCCc
Confidence 45578999999877776665 678999887643
No 299
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.93 E-value=0.0013 Score=52.25 Aligned_cols=154 Identities=9% Similarity=0.086 Sum_probs=90.9
Q ss_pred cceEEEcCCCCEEEEE------------ecCCeEEEEeCCCCCCCcceEEEecC-----CccceEEEEEcC--CCc-EEE
Q 024185 93 RPTVAFDQQGLVFAVA------------MEAGAIKLFDSRSYDKGPFDTFLVGG-----DTAEVCDIKFSN--DGK-SML 152 (271)
Q Consensus 93 ~~~~~~~~~~~~l~~~------------~~d~~i~i~d~~~~~~~~~~~~~~~~-----~~~~v~~~~~s~--~~~-~l~ 152 (271)
...+...|+|..++++ ..+|.|.++|..+.... .....+.+ .......+.+.+ ++. +|+
T Consensus 52 ~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~-~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~ 130 (355)
T 3sre_A 52 SEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPA-VSELEIIGNTLDISSFNPHGISTFIDDDNTVYLL 130 (355)
T ss_dssp CCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCC-EEECEEECSSCCGGGCCEEEEEEEECTTCCEEEE
T ss_pred cceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCc-eEEEEccCCCCCcCceeeeeeEEEECCCCcEEEE
Confidence 3447778877554444 26899999999754321 12223333 223566777655 453 454
Q ss_pred EEe-c--CCeEEEEECCCC--eE--EEEeecCCCCCceeeEEECCCCCEEEEecC-----------------CCcEEEEE
Q 024185 153 LTT-T--NNNIYVLDAYGG--EK--RCGFSLEPSPNTNTEATFTPDGQYVVSGSG-----------------DGTLHAWN 208 (271)
Q Consensus 153 ~~~-~--d~~i~~~d~~~~--~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----------------dg~i~iwd 208 (271)
++. . +.++.+|++..+ .. +..+... .-...+.+.+.++|.+.++... .|.+.-+|
T Consensus 131 Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~-~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d 209 (355)
T 3sre_A 131 VVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHK-LLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYS 209 (355)
T ss_dssp EEECSTTCCEEEEEEEETTTTEEEEEEEECCT-TCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEEC
T ss_pred EEECCCCCCeEEEEEEECCCCEEEEEeccccC-CCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEE
Confidence 443 2 567888776543 22 2233322 2245788999999998776541 24555555
Q ss_pred cCCceeEEEecCCcceeEEEEEecCCcEEEEeC---CeEEEEcCCC
Q 024185 209 INTRNEVACWNGNIGVVACLKWAPRRAMFVAAS---SVLSFWIPNP 251 (271)
Q Consensus 209 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~---~~v~iw~~~~ 251 (271)
. ++...... .-...+.++|+||++.|..+. +.|..|++..
T Consensus 210 ~--~~~~~~~~-~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 210 P--NDVRVVAE-GFDFANGINISPDGKYVYIAELLAHKIHVYEKHA 252 (355)
T ss_dssp T--TCCEEEEE-EESSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred C--CeEEEeec-CCcccCcceECCCCCEEEEEeCCCCeEEEEEECC
Confidence 4 33222222 223458999999998877765 7799999863
No 300
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.92 E-value=0.0018 Score=52.23 Aligned_cols=137 Identities=12% Similarity=0.194 Sum_probs=90.0
Q ss_pred ccCceEEEEEecCcceeEEEecC------CcceEEEcCCCCEEEEEecCCeEEEEeCCCCCCC--------cce--EEEe
Q 024185 69 TTALEYGIFVLMLASFQGILRLR------GRPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKG--------PFD--TFLV 132 (271)
Q Consensus 69 ~~dg~i~iwd~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~--------~~~--~~~~ 132 (271)
..++.||.-++..+...+.++.. .+..+..+|+|++||..+ +..|.+..+..+... +++ .+.+
T Consensus 38 a~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l 116 (452)
T 3pbp_A 38 IQDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSI 116 (452)
T ss_dssp EETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEG
T ss_pred EECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccccccceeEEEc
Confidence 44577777777644445555443 355599999999999987 568999888733211 112 2222
Q ss_pred cC----CccceEEEEEcCC---CcEEEEEecCCeEEEEECCCC--eEEEEee-------cCCCCCceeeEEECCCCCEEE
Q 024185 133 GG----DTAEVCDIKFSND---GKSMLLTTTNNNIYVLDAYGG--EKRCGFS-------LEPSPNTNTEATFTPDGQYVV 196 (271)
Q Consensus 133 ~~----~~~~v~~~~~s~~---~~~l~~~~~d~~i~~~d~~~~--~~~~~~~-------~~~~~~~v~~~~~~~~~~~l~ 196 (271)
.. ...+|..+.|+|- +..|++-..|+.|++||+... ++. .++ .......+.+++|.+++-.|.
T Consensus 117 ~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLY 195 (452)
T 3pbp_A 117 DEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLY 195 (452)
T ss_dssp GGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEE
T ss_pred CCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCCCcEEE
Confidence 21 2467999999994 568999999999999999752 122 222 111113488899999877565
Q ss_pred E--ecCCCcEEEE
Q 024185 197 S--GSGDGTLHAW 207 (271)
Q Consensus 197 ~--~~~dg~i~iw 207 (271)
. .+.+|.|+-.
T Consensus 196 vl~~t~~GDIYAl 208 (452)
T 3pbp_A 196 CLNTTEGGDIFAF 208 (452)
T ss_dssp EEECTTSCEEEEE
T ss_pred EEecCCCCCEEEE
Confidence 5 5578888754
No 301
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.90 E-value=0.0034 Score=48.71 Aligned_cols=181 Identities=10% Similarity=0.059 Sum_probs=94.5
Q ss_pred hhhhccC----ceEEEEEecCcceeEEEecC--CcceEEEcCCCCEEEEEecC------CeEEEEeCCCCCCCcceEEEe
Q 024185 65 LVLLTTA----LEYGIFVLMLASFQGILRLR--GRPTVAFDQQGLVFAVAMEA------GAIKLFDSRSYDKGPFDTFLV 132 (271)
Q Consensus 65 l~s~~~d----g~i~iwd~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~d------~~i~i~d~~~~~~~~~~~~~~ 132 (271)
++.|+.+ ..+.+||..+++....-... .....+..-+++.++.|+.+ ..+.+||..+.+. .....+
T Consensus 59 yv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W--~~~~~~ 136 (306)
T 3ii7_A 59 YILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESW--HTKPSM 136 (306)
T ss_dssp EEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEE--EEECCC
T ss_pred EEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCce--EeCCCC
Confidence 4455544 66888898877643332222 11112222367777777654 4689999987653 111111
Q ss_pred cCCccceEEEEEcCCCcEEEEEec---------CCeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEecCC--
Q 024185 133 GGDTAEVCDIKFSNDGKSMLLTTT---------NNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGD-- 201 (271)
Q Consensus 133 ~~~~~~v~~~~~s~~~~~l~~~~~---------d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-- 201 (271)
.........+. -+++.++.|+. -..+.+||..+.+-...-... .+..-.++.. -+++.++.|+.+
T Consensus 137 p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p-~~r~~~~~~~-~~~~i~v~GG~~~~ 212 (306)
T 3ii7_A 137 LTQRCSHGMVE--ANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMI-EARKNHGLVF-VKDKIFAVGGQNGL 212 (306)
T ss_dssp SSCCBSCEEEE--ETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCS-SCCBSCEEEE-ETTEEEEECCEETT
T ss_pred cCCcceeEEEE--ECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCcc-chhhcceEEE-ECCEEEEEeCCCCC
Confidence 11111112222 25676777654 345889999887643321111 1111111222 266777777654
Q ss_pred ---CcEEEEEcCCceeEE--EecCCcceeEEEEEecCCcEEEEeC-------CeEEEEcCCCCC
Q 024185 202 ---GTLHAWNINTRNEVA--CWNGNIGVVACLKWAPRRAMFVAAS-------SVLSFWIPNPSS 253 (271)
Q Consensus 202 ---g~i~iwd~~~~~~~~--~~~~~~~~v~~~~~s~~~~~l~~~~-------~~v~iw~~~~~~ 253 (271)
..+.+||+.+.+-.. .+.........+.+ ++++++.|+ .++.+||+++.+
T Consensus 213 ~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~ 274 (306)
T 3ii7_A 213 GGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNTETDK 274 (306)
T ss_dssp EEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEETTTTE
T ss_pred CCCceEEEeeCCCCcEEECCCCCCCccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCCCe
Confidence 468999998765432 22211112222222 677777775 458899987754
No 302
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.88 E-value=0.0051 Score=48.01 Aligned_cols=217 Identities=10% Similarity=0.045 Sum_probs=107.0
Q ss_pred ceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhcc-----------CceEEEEEecCcceeEEE
Q 024185 20 NIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTT-----------ALEYGIFVLMLASFQGIL 88 (271)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~-----------dg~i~iwd~~~~~~~~~~ 88 (271)
+..+..++...+.+.. ..+.....+........++.. ++.|+. ...+..||..+++-...-
T Consensus 12 G~~~~~yd~~~~~W~~---~~~~~p~~r~~~~~~~~~~~i-----yv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~ 83 (315)
T 4asc_A 12 EEGAVAYDPAANECYC---ASLSSQVPKNHVSLVTKENQV-----FVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMP 83 (315)
T ss_dssp TTEEEEEETTTTEEEE---EECCCCSCSSEEEEECTTCCE-----EEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECC
T ss_pred CCceEEECCCCCeEec---CCCCCCCCccceEEEEECCEE-----EEEcCcccCCCCCccccccceEEecCCCCeEEECC
Confidence 3567778877775542 222222222333333345554 445552 123677888776643221
Q ss_pred ecCCc---ceEEEcCCCCEEEEEecC--------CeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEec-
Q 024185 89 RLRGR---PTVAFDQQGLVFAVAMEA--------GAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTT- 156 (271)
Q Consensus 89 ~~~~~---~~~~~~~~~~~l~~~~~d--------~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~- 156 (271)
..... ..++. -+++.++.|+.+ ..+.+||..+.+... ...+.........+ ..+++.++.|+.
T Consensus 84 ~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~--~~~~p~~r~~~~~~--~~~~~iyv~GG~~ 158 (315)
T 4asc_A 84 PLPSPRCLFGLGE-ALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGE--SDPLPYVVYGHTVL--SHMDLVYVIGGKG 158 (315)
T ss_dssp CBSSCEESCEEEE-ETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEE--CCCCSSCCBSCEEE--EETTEEEEECCBC
T ss_pred CCCcchhceeEEE-ECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeE--CCCCCCcccceeEE--EECCEEEEEeCCC
Confidence 11111 11222 256666666632 368999998765311 11111111111222 235677777775
Q ss_pred -----CCeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEecCCC-----cEEEEEcCCceeEEEe--cCCcce
Q 024185 157 -----NNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDG-----TLHAWNINTRNEVACW--NGNIGV 224 (271)
Q Consensus 157 -----d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~~~~~~~--~~~~~~ 224 (271)
-..+.+||..+.+-...-.... +..-.+++ .-+++.++.|+.++ .+.+||+.+.+-...- ......
T Consensus 159 ~~~~~~~~~~~yd~~~~~W~~~~~~p~-~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~ 236 (315)
T 4asc_A 159 SDRKCLNKMCVYDPKKFEWKELAPMQT-ARSLFGAT-VHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSS 236 (315)
T ss_dssp TTSCBCCCEEEEETTTTEEEECCCCSS-CCBSCEEE-EETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBS
T ss_pred CCCcccceEEEEeCCCCeEEECCCCCC-chhceEEE-EECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccc
Confidence 2468999988775433211111 11111122 22667777777654 5889999876543322 111111
Q ss_pred eEEEEEecCCcEEEEeC----------------CeEEEEcCCCCC
Q 024185 225 VACLKWAPRRAMFVAAS----------------SVLSFWIPNPSS 253 (271)
Q Consensus 225 v~~~~~s~~~~~l~~~~----------------~~v~iw~~~~~~ 253 (271)
. ++. .-++++++.|+ .++.+||+++.+
T Consensus 237 ~-~~~-~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~ 279 (315)
T 4asc_A 237 L-SLV-SLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKK 279 (315)
T ss_dssp C-EEE-EETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTE
T ss_pred e-eEE-EECCEEEEECCccccCcCCccccccccCcEEEecCCCCh
Confidence 1 222 22566666664 137788887753
No 303
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.88 E-value=0.0019 Score=56.00 Aligned_cols=120 Identities=9% Similarity=0.065 Sum_probs=79.5
Q ss_pred eEEEcC-CCCEEEEEecCC-----------eEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEec-CCeEE
Q 024185 95 TVAFDQ-QGLVFAVAMEAG-----------AIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTT-NNNIY 161 (271)
Q Consensus 95 ~~~~~~-~~~~l~~~~~d~-----------~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-d~~i~ 161 (271)
..++.+ +++.++.|+.+. .+.+||..+++........ ..+.....+.++.++++.+++|+. +..+.
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~-~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~ 268 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTV-TKHDMFCPGISMDGNGQIVVTGGNDAKKTS 268 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEE-CSCCCSSCEEEECTTSCEEEECSSSTTCEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccC-CCCCCccccccCCCCCCEEEeCCCCCCceE
Confidence 367777 888888886542 5889999988753333222 122333445778899999999884 56899
Q ss_pred EEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEec-CC-----CcEEEEEcCCceeEE
Q 024185 162 VLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGS-GD-----GTLHAWNINTRNEVA 216 (271)
Q Consensus 162 ~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d-----g~i~iwd~~~~~~~~ 216 (271)
+||..+++-...-.... +..-.+++..++++.++.|+ .+ ..+.+||..+++-..
T Consensus 269 ~yd~~t~~W~~~~~~~~-~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~ 328 (656)
T 1k3i_A 269 LYDSSSDSWIPGPDMQV-ARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTS 328 (656)
T ss_dssp EEEGGGTEEEECCCCSS-CCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEE
T ss_pred EecCcCCceeECCCCCc-cccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCccee
Confidence 99998776443221111 12233466678999999998 34 469999998766433
No 304
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.85 E-value=0.0056 Score=47.61 Aligned_cols=225 Identities=8% Similarity=0.010 Sum_probs=132.8
Q ss_pred eEEeeecceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecC-cceeEEEecC
Q 024185 13 ALLFARQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLML-ASFQGILRLR 91 (271)
Q Consensus 13 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~ 91 (271)
+++.-..+..+..++.... ..++.+.-.+..+.--.++++.-. +++ +..|+-|+++. ..+++.+..|
T Consensus 79 ~ViALrag~~LQiFnletK----~klks~~~~e~VvfWkWis~~~L~-----lVT---~taVyHWs~~~~s~P~kvFdR~ 146 (365)
T 2xzh_A 79 KVIALKAGKTLQIFNIEMK----SKMKAHTMTDDVTFWKWISLNTVA-----LVT---DNAVYHWSMEGESQPVKMFDRH 146 (365)
T ss_dssp SEEEEEETTEEEEEETTTT----EEEEEEECSSCEEEEEECSSSEEE-----EEE---SSEEEEEESSTTCCCEEEEECC
T ss_pred cEEEEecCCeEEEechHHh----hhhcceecCCccEEEEecCCCeEE-----EEc---CCcEEEEcccCCCCCceeeecc
Confidence 3333334566666665555 344444444444444444444322 233 45699999974 4577777666
Q ss_pred C----cce--EEEcCCCCEEEEEe-------cCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCC---CcEEEEEe
Q 024185 92 G----RPT--VAFDQQGLVFAVAM-------EAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSND---GKSMLLTT 155 (271)
Q Consensus 92 ~----~~~--~~~~~~~~~l~~~~-------~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~---~~~l~~~~ 155 (271)
. ... ...+++.++++..+ -.|.+.+|..+.+. ...+++|.+....+....+ .+.++.+.
T Consensus 147 ~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~-----sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~ 221 (365)
T 2xzh_A 147 SSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-----SQPIEGHAASFAQFKMEGNAEESTLFCFAV 221 (365)
T ss_dssp GGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTE-----EEEECCSEEEEEEECCTTCSSCEEEEEEEE
T ss_pred hhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccc-----cceeeeeeeeeEEEecCCCCCCceEEEEEE
Confidence 3 122 55578888776543 23678999988655 5667888776655544322 22444444
Q ss_pred c---CCeEEEEECCCC---e------EEEE-eecCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCCceeEEEecCCc
Q 024185 156 T---NNNIYVLDAYGG---E------KRCG-FSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNI 222 (271)
Q Consensus 156 ~---d~~i~~~d~~~~---~------~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 222 (271)
. .+++++-++... . .+.. +..........++..++.-..++.-+.-|.+++||+.++.++..-+-..
T Consensus 222 r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS~ 301 (365)
T 2xzh_A 222 RGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISG 301 (365)
T ss_dssp EETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCS
T ss_pred ecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccCC
Confidence 3 258999988432 1 1111 1111112345567778877788888999999999999999998766556
Q ss_pred ceeEEEEEecC-CcEEEEeC-CeEEEEcCCCCCC
Q 024185 223 GVVACLKWAPR-RAMFVAAS-SVLSFWIPNPSSN 254 (271)
Q Consensus 223 ~~v~~~~~s~~-~~~l~~~~-~~v~iw~~~~~~~ 254 (271)
..|...+-+.+ +-.+...- |.|.--.++...+
T Consensus 302 d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~~~~i 335 (365)
T 2xzh_A 302 ETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENI 335 (365)
T ss_dssp SCEEEEEEEGGGTEEEEEETTCEEEEEEECTTTH
T ss_pred CceEEecccCCCCcEEEEcCCCEEEEEEECcccE
Confidence 66655555443 33444443 6666555555443
No 305
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.85 E-value=0.018 Score=53.24 Aligned_cols=229 Identities=10% Similarity=0.048 Sum_probs=120.2
Q ss_pred eeEEeeecceeeEEEEee--ccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcce-eEEE
Q 024185 12 QALLFARQNIILILLESL--CGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASF-QGIL 88 (271)
Q Consensus 12 ~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~-~~~~ 88 (271)
..|++++.+|.+..+... ++.....+...+. ..++.-..+...+.. . ++..+ +.-..++--+ ++. ...+
T Consensus 618 ~~L~igl~dG~l~~~~~d~~tg~l~d~r~~~LG--~~pv~L~~~~~~~~~-~---V~a~s-~rp~liy~~~-~~l~~s~l 689 (1158)
T 3ei3_A 618 HYLLCALGDGALFYFGLNIETGLLSDRKKVTLG--TQPTVLRTFRSLSTT-N---VFACS-DRPTVIYSSN-HKLVFSNV 689 (1158)
T ss_dssp EEEEEEETTSEEEEEEECTTTCCEEEEEEEECC--SSCCEEEEEESSSCE-E---EEEES-SSCEEEEESS-SSEEEEEB
T ss_pred cEEEEEeCCCeEEEEEEcCCCCccccceeEEcC--CCceEEEEEeeCCce-e---EEEEC-CCCEEEEEcC-CceEEecc
Confidence 457777888888766532 2322222222232 234443333333332 1 22223 3333333322 222 1112
Q ss_pred ecCCcc-eEEEcCCC--CEEEEEecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEecC--------
Q 024185 89 RLRGRP-TVAFDQQG--LVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTN-------- 157 (271)
Q Consensus 89 ~~~~~~-~~~~~~~~--~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-------- 157 (271)
....+. ...|+... +-++..+ ++.++|..+.+.+. .....+.- ...+..++++|+.+.++.+..+
T Consensus 690 ~~~~v~~~~~F~se~~~~g~v~~~-~~~LrI~~i~~~~~--~~~~~ipL-~~Tprri~y~~~~~~~~v~~~~~~~~~~~~ 765 (1158)
T 3ei3_A 690 NLKEVNYMCPLNSDGYPDSLALAN-NSTLTIGTIDEIQK--LHIRTVPL-YESPRKICYQEVSQCFGVLSSRIEVQDTSG 765 (1158)
T ss_dssp SSSCCCEEEEECCSSSTTEEEEEC-SSCEEEEEECCSSS--EEEEEEEC-SSEEEEEEEEGGGTEEEEEEEEEEEECSSS
T ss_pred ChHHhceEeccCcccCCCcEEEEc-CCceEEEEecccCC--eeEEEEeC-CCCceEEEEcCCCCEEEEEEEecccccccc
Confidence 222332 35665432 3355444 45699988865443 22222221 2567888888877665543311
Q ss_pred -----------------------------------------CeEEEEECCCCeEEEEeecCCCCCceeeEE---ECCC-C
Q 024185 158 -----------------------------------------NNIYVLDAYGGEKRCGFSLEPSPNTNTEAT---FTPD-G 192 (271)
Q Consensus 158 -----------------------------------------~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~---~~~~-~ 192 (271)
+.+++.|-.+.+.+..+...... .+.+++ |..+ .
T Consensus 766 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~s~i~lidp~t~~~i~~~~l~~nE-~~~sv~~v~~~~~~~ 844 (1158)
T 3ei3_A 766 GTTALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNE-YALSLVSCKLGKDPN 844 (1158)
T ss_dssp SEEESSCCHHHHCSEEEECCCCCC----------CCCEEEEEEEEEEETTTCCEEEEEECCTTE-EEEEEEEECCTTCCC
T ss_pred ccchhhhhhhhhhhhhcccccccccccccCchhhcCCceeeEEEEEEeCCCCeEEEEEeCCCCc-ceEEEEEEEEccCCC
Confidence 24677777777776666554443 233333 3322 4
Q ss_pred CEEEEec----------CCCcEEEEEcCCceeEEEe-cCCcceeEEEEEecCCcEEEEeCCeEEEEcCCCCCC
Q 024185 193 QYVVSGS----------GDGTLHAWNINTRNEVACW-NGNIGVVACLKWAPRRAMFVAASSVLSFWIPNPSSN 254 (271)
Q Consensus 193 ~~l~~~~----------~dg~i~iwd~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~~v~iw~~~~~~~ 254 (271)
.+++.|+ ..|.|++|++..++..... ...+++|++++-- +|+++++.+.++++|++...+.
T Consensus 845 ~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g~v~al~~~-~g~Lla~ig~~l~vy~l~~~~~ 916 (1158)
T 3ei3_A 845 TYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEF-NGKLLASINSTVRLYEWTTEKE 916 (1158)
T ss_dssp CEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESSCEEEEEEE-TTEEEEEETTEEEEEEECTTSC
T ss_pred EEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCCcCEEEeee-CCEEEEEcCCEEEEEECCCCce
Confidence 6888775 3478999999754332211 2235678887743 5777777779999999986653
No 306
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.80 E-value=0.0038 Score=48.53 Aligned_cols=173 Identities=8% Similarity=0.059 Sum_probs=89.6
Q ss_pred ceEEEEEecCcceeEEEecC--Cc-ceEEEcCCCCEEEEEecC-----CeEEEEeCCCCCCCcceEEEecCCccceEEEE
Q 024185 72 LEYGIFVLMLASFQGILRLR--GR-PTVAFDQQGLVFAVAMEA-----GAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIK 143 (271)
Q Consensus 72 g~i~iwd~~~~~~~~~~~~~--~~-~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~ 143 (271)
..+.+||..+.+....-... .. .+++. -+++.++.|+.+ ..+.+||..+.+.... ..+.........+.
T Consensus 90 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~--~~~p~~r~~~~~~~ 166 (308)
T 1zgk_A 90 SALDCYNPMTNQWSPCAPMSVPRNRIGVGV-IDGHIYAVGGSHGCIHHNSVERYEPERDEWHLV--APMLTRRIGVGVAV 166 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBTCEEEE-ETTEEEEECCEETTEECCCEEEEETTTTEEEEC--CCCSSCCBSCEEEE
T ss_pred ceEEEECCCCCeEeECCCCCcCccccEEEE-ECCEEEEEcCCCCCcccccEEEECCCCCeEeEC--CCCCccccceEEEE
Confidence 35778888776533222111 11 11222 266766766533 4688999887653111 11111111222222
Q ss_pred EcCCCcEEEEEecC-----CeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEecCC-----CcEEEEEcCCce
Q 024185 144 FSNDGKSMLLTTTN-----NNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGD-----GTLHAWNINTRN 213 (271)
Q Consensus 144 ~s~~~~~l~~~~~d-----~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~ 213 (271)
+ +++.++.|+.+ ..+..||..+.+-...-...........+.+ +++.++.|+.+ ..+.+||+.+.+
T Consensus 167 ~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 242 (308)
T 1zgk_A 167 L--NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETET 242 (308)
T ss_dssp E--TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred E--CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCc
Confidence 2 56777777654 4689999887754332111111111112222 67777777764 469999998765
Q ss_pred eEEE--ecCCcceeEEEEEecCCcEEEEeC-------CeEEEEcCCCCC
Q 024185 214 EVAC--WNGNIGVVACLKWAPRRAMFVAAS-------SVLSFWIPNPSS 253 (271)
Q Consensus 214 ~~~~--~~~~~~~v~~~~~s~~~~~l~~~~-------~~v~iw~~~~~~ 253 (271)
-... ++..... .++.. -++++++.|+ .++.+||+++.+
T Consensus 243 W~~~~~~p~~r~~-~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 243 WTFVAPMKHRRSA-LGITV-HQGRIYVLGGYDGHTFLDSVECYDPDTDT 289 (308)
T ss_dssp EEECCCCSSCCBS-CEEEE-ETTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred EEECCCCCCCccc-eEEEE-ECCEEEEEcCcCCCcccceEEEEcCCCCE
Confidence 4332 2211111 12222 2677777765 458899987754
No 307
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.76 E-value=0.01 Score=47.91 Aligned_cols=147 Identities=12% Similarity=0.218 Sum_probs=96.1
Q ss_pred EEcCCCCEEEEEecCCeEEEEeCCCCCCCcceEEEecC--CccceEEEEEcCCCcEEEEEecCCeEEEEECCCCe-----
Q 024185 97 AFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGG--DTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGE----- 169 (271)
Q Consensus 97 ~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~~~~----- 169 (271)
....+|..++.+- ++.||.-++..... ++...+.. ....+..+..||+|++||..+. ..|.+..+..+.
T Consensus 27 ~~~~n~t~i~~a~-~n~iR~~~i~~~~~--Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~ 102 (452)
T 3pbp_A 27 FSSQNGTRIVFIQ-DNIIRWYNVLTDSL--YHSLNFSRHLVLDDTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVED 102 (452)
T ss_dssp EEETTTTEEEEEE-TTEEEEEETTTCSS--CEEEECTTTCCCCTTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCC
T ss_pred EEEcCCCEEEEEE-CCEEEEEECCCCCc--ceEEecCcccccCceeEEEECCCCCEEEEecC-CeEEEEEecCccccCcc
Confidence 3445666666665 57888888774432 55555543 2336888999999999988764 489999887321
Q ss_pred -------EEEEeecCC----CCCceeeEEECCC---CCEEEEecCCCcEEEEEcCCc--eeEEEe---------cCCcce
Q 024185 170 -------KRCGFSLEP----SPNTNTEATFTPD---GQYVVSGSGDGTLHAWNINTR--NEVACW---------NGNIGV 224 (271)
Q Consensus 170 -------~~~~~~~~~----~~~~v~~~~~~~~---~~~l~~~~~dg~i~iwd~~~~--~~~~~~---------~~~~~~ 224 (271)
..+.+.... ....|..+.|+|- +..|++-..|+.|++||+... ++. .+ ......
T Consensus 103 ~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~e 181 (452)
T 3pbp_A 103 VSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVND 181 (452)
T ss_dssp HHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCC
T ss_pred cccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccce
Confidence 122333321 1245999999996 457888999999999999752 112 22 122256
Q ss_pred eEEEEEecCCcEEEE--eC--CeEEEEc
Q 024185 225 VACLKWAPRRAMFVA--AS--SVLSFWI 248 (271)
Q Consensus 225 v~~~~~s~~~~~l~~--~~--~~v~iw~ 248 (271)
|.+++|.+++-.|.. .+ |+|+-..
T Consensus 182 v~S~~Fg~~~lTLYvl~~t~~GDIYAlc 209 (452)
T 3pbp_A 182 ITDLEFSKDGLTLYCLNTTEGGDIFAFY 209 (452)
T ss_dssp EEEEEECTTSSCEEEEECTTSCEEEEES
T ss_pred EEEEEEcCCCcEEEEEecCCCCCEEEEC
Confidence 889999998764444 33 7766544
No 308
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.69 E-value=0.005 Score=48.73 Aligned_cols=144 Identities=15% Similarity=0.172 Sum_probs=83.6
Q ss_pred CcceEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcceEEEe----cCCccceEEEEEcCC---CcEEEEE---ecCCeEE
Q 024185 92 GRPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLV----GGDTAEVCDIKFSND---GKSMLLT---TTNNNIY 161 (271)
Q Consensus 92 ~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~----~~~~~~v~~~~~s~~---~~~l~~~---~~d~~i~ 161 (271)
..+.++|.|||+.+++--..|.|++++..+++.. ....+ .........++++|+ +..|+.. ..++.|.
T Consensus 33 ~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~--~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~ 110 (347)
T 3das_A 33 SPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKT--ELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIV 110 (347)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEE--EEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEE
T ss_pred CceEEEEcCCCcEEEEEecCCEEEEEECCCCcEe--eecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEE
Confidence 3466999999996666555899999987655431 11111 123456889999995 3344433 2355666
Q ss_pred EEECCCC----------eEEE-EeecCCCCCceeeEEECCCCCEEEEecC-------------CCcEEEEEcCCc-----
Q 024185 162 VLDAYGG----------EKRC-GFSLEPSPNTNTEATFTPDGQYVVSGSG-------------DGTLHAWNINTR----- 212 (271)
Q Consensus 162 ~~d~~~~----------~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~-------------dg~i~iwd~~~~----- 212 (271)
-|.+..+ +.+. .+.. .....-..+.|.|||.+.++.+. .|.|.-.+....
T Consensus 111 R~~~~~~~~~~~~~~~~~~i~~~~p~-~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~n 189 (347)
T 3das_A 111 RMLYDEKKPSGEQLGAPDTVFRGIPK-GVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGN 189 (347)
T ss_dssp EEEBCTTSCTTCCBCCCEEEEEEECC-CSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTC
T ss_pred EEEeCCCCcccccCCCcEEEEEcCCC-CCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCC
Confidence 6765541 1111 1221 11122456999999987777542 355555555321
Q ss_pred ----eeEEEecCCcceeEEEEEecCCcEEEEe
Q 024185 213 ----NEVACWNGNIGVVACLKWAPRRAMFVAA 240 (271)
Q Consensus 213 ----~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 240 (271)
..+.. .+|.. ...++|+|+|.++++-
T Consensus 190 Pf~~~~i~a-~G~RN-p~Gla~dp~G~L~~~d 219 (347)
T 3das_A 190 PFPGSPVYS-YGHRN-VQGLAWDDKQRLFASE 219 (347)
T ss_dssp SSTTCCEEE-BCCSB-CCEEEECTTCCEEEEE
T ss_pred CCCCCeEEe-eCCCC-cceEEECCCCCEEEEe
Confidence 11222 25544 4689999998876654
No 309
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.68 E-value=0.013 Score=46.60 Aligned_cols=175 Identities=11% Similarity=0.064 Sum_probs=99.2
Q ss_pred cCceEEEEEecCcc-eeEEE--ecC-------CcceEEEcC--CCC-EEEEE-ec--CCeEEEEeCCCCCCCcceEEEec
Q 024185 70 TALEYGIFVLMLAS-FQGIL--RLR-------GRPTVAFDQ--QGL-VFAVA-ME--AGAIKLFDSRSYDKGPFDTFLVG 133 (271)
Q Consensus 70 ~dg~i~iwd~~~~~-~~~~~--~~~-------~~~~~~~~~--~~~-~l~~~-~~--d~~i~i~d~~~~~~~~~~~~~~~ 133 (271)
.+|.|.++|.++.. ....+ .+. ...-+.+.+ ++. +|+++ .. +.++.+|++............+.
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~ 160 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIR 160 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEEC
T ss_pred CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccc
Confidence 68999999987421 12222 221 112255544 453 45555 22 46788887765432112222333
Q ss_pred CC-ccceEEEEEcCCCcEEEEEe-----------------cCCeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEE
Q 024185 134 GD-TAEVCDIKFSNDGKSMLLTT-----------------TNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYV 195 (271)
Q Consensus 134 ~~-~~~v~~~~~s~~~~~l~~~~-----------------~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 195 (271)
+. -....++.+.++|.+.++.. ..|.+.-+|. ++.......- ...+.++|+||++.+
T Consensus 161 g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~~~~~~~~l---~~pNGia~spDg~~l 235 (355)
T 3sre_A 161 HKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--NDVRVVAEGF---DFANGINISPDGKYV 235 (355)
T ss_dssp CTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TCCEEEEEEE---SSEEEEEECTTSSEE
T ss_pred cCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--CeEEEeecCC---cccCcceECCCCCEE
Confidence 22 24578999999998766653 1245555654 3322222221 126679999999887
Q ss_pred EEec-CCCcEEEEEcCC-cee--EEEecCCcceeEEEEEec-CCcEEEEeC---CeEEEEcCC
Q 024185 196 VSGS-GDGTLHAWNINT-RNE--VACWNGNIGVVACLKWAP-RRAMFVAAS---SVLSFWIPN 250 (271)
Q Consensus 196 ~~~~-~dg~i~iwd~~~-~~~--~~~~~~~~~~v~~~~~s~-~~~~l~~~~---~~v~iw~~~ 250 (271)
+.+. ..+.|..|++.. ++. ...+. ..+..-.+++.+ +|++.+++. +.|..|+.+
T Consensus 236 Yvadt~~~~I~~~~~~~~g~l~~~~~~~-~~g~PDGi~vD~e~G~lwva~~~~g~~v~~~~P~ 297 (355)
T 3sre_A 236 YIAELLAHKIHVYEKHANWTLTPLRVLS-FDTLVDNISVDPVTGDLWVGCHPNGMRIFFYDAE 297 (355)
T ss_dssp EEEEGGGTEEEEEEECTTSCEEEEEEEE-CSSEEEEEEECTTTCCEEEEEESCHHHHHSCCTT
T ss_pred EEEeCCCCeEEEEEECCCCcEecCEEEe-CCCCCceEEEeCCCCcEEEEecCCceEEEEECCC
Confidence 7664 468899999863 322 22332 245568899999 599887664 344444543
No 310
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.67 E-value=0.011 Score=45.71 Aligned_cols=181 Identities=12% Similarity=0.096 Sum_probs=93.4
Q ss_pred hhhhccC-----ceEEEEEecCcceeEEEecC--CcceEEEcCCCCEEEEEecCC-----eEEEEeCCCCCCCcceEEEe
Q 024185 65 LVLLTTA-----LEYGIFVLMLASFQGILRLR--GRPTVAFDQQGLVFAVAMEAG-----AIKLFDSRSYDKGPFDTFLV 132 (271)
Q Consensus 65 l~s~~~d-----g~i~iwd~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~d~-----~i~i~d~~~~~~~~~~~~~~ 132 (271)
++.|+.+ ..+.+||..+.+....-... .....+..-+++.++.|+.++ .+.+||..+.+. .....+
T Consensus 65 yv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W--~~~~~~ 142 (302)
T 2xn4_A 65 FAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEW--FHVAPM 142 (302)
T ss_dssp EEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEE--EEECCC
T ss_pred EEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeE--eecCCC
Confidence 4455543 35778888776543322211 111112223667777776553 588899887653 111111
Q ss_pred cCCccceEEEEEcCCCcEEEEEecC-------CeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEecCC----
Q 024185 133 GGDTAEVCDIKFSNDGKSMLLTTTN-------NNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGD---- 201 (271)
Q Consensus 133 ~~~~~~v~~~~~s~~~~~l~~~~~d-------~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---- 201 (271)
.........+. -+++.++.|+.+ ..+..||..+.+-...-......... ++.. -++++++.|+.+
T Consensus 143 p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~ 218 (302)
T 2xn4_A 143 NTRRSSVGVGV--VGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGA-GVGV-LNNLLYAVGGHDGPLV 218 (302)
T ss_dssp SSCCBSCEEEE--ETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSC-EEEE-ETTEEEEECCBSSSSB
T ss_pred CCcccCceEEE--ECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccc-cEEE-ECCEEEEECCCCCCcc
Confidence 11111112222 256777776542 45889999877644321111111111 1222 267777787764
Q ss_pred -CcEEEEEcCCceeEEE--ecCCcceeEEEEEecCCcEEEEeC-------CeEEEEcCCCCC
Q 024185 202 -GTLHAWNINTRNEVAC--WNGNIGVVACLKWAPRRAMFVAAS-------SVLSFWIPNPSS 253 (271)
Q Consensus 202 -g~i~iwd~~~~~~~~~--~~~~~~~v~~~~~s~~~~~l~~~~-------~~v~iw~~~~~~ 253 (271)
..+.+||+.+.+-... +...... .++. .-++++++.|+ .++.+||+++.+
T Consensus 219 ~~~~~~yd~~~~~W~~~~~~~~~r~~-~~~~-~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 219 RKSVEVYDPTTNAWRQVADMNMCRRN-AGVC-AVNGLLYVVGGDDGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp CCCEEEEETTTTEEEEECCCSSCCBS-CEEE-EETTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred cceEEEEeCCCCCEeeCCCCCCcccc-CeEE-EECCEEEEECCcCCCcccccEEEEcCCCCe
Confidence 3699999987654332 2111111 1122 23677777775 348999998764
No 311
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=97.63 E-value=0.012 Score=48.62 Aligned_cols=105 Identities=11% Similarity=0.118 Sum_probs=60.2
Q ss_pred CcceEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcceEEEecC------CccceEEEEEcCC---CcEEEEEec------
Q 024185 92 GRPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGG------DTAEVCDIKFSND---GKSMLLTTT------ 156 (271)
Q Consensus 92 ~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~------~~~~v~~~~~s~~---~~~l~~~~~------ 156 (271)
....++|.|+|+++++-...+.|++++..+++. .....+.. .......++|+|+ +..|+.+..
T Consensus 28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~--~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~ 105 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTERATGKILRVNPESGSV--KTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS 105 (454)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCE--EEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred CceEEEEcCCCcEEEEEcCCCEEEEEECCCCcE--eEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCC
Confidence 345699999999666654445798888655443 11122211 2456789999995 445544432
Q ss_pred -------CCeEEEEECCCC--e-----EEE-EeecCCCCCceeeEEECCCCCEEEEec
Q 024185 157 -------NNNIYVLDAYGG--E-----KRC-GFSLEPSPNTNTEATFTPDGQYVVSGS 199 (271)
Q Consensus 157 -------d~~i~~~d~~~~--~-----~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~ 199 (271)
...|.-++...+ + .+. .+.. ........+.|.|||++.++.+
T Consensus 106 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~-~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPS-SKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECC-CSSCCEEEEEECTTSCEEEEEC
T ss_pred CccccccccEEEEEEECCCCCCcCCcEEEEEcCCC-CCCCCCCeEeECCCCeEEEEEC
Confidence 235666665322 1 111 1221 1112367899999999777654
No 312
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.57 E-value=0.0055 Score=48.83 Aligned_cols=143 Identities=15% Similarity=0.174 Sum_probs=80.6
Q ss_pred cceEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcceEEE-ecCCccceEEEEEcCC---CcEEEEEec----C----CeE
Q 024185 93 RPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFL-VGGDTAEVCDIKFSND---GKSMLLTTT----N----NNI 160 (271)
Q Consensus 93 ~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-~~~~~~~v~~~~~s~~---~~~l~~~~~----d----~~i 160 (271)
...++|.|+|+ |+++..+|.|+++|. +++ ..+.... ..........++++|+ +..|+++.. + ..|
T Consensus 31 P~~ia~~pdG~-l~V~e~~g~I~~~d~-~G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v 107 (354)
T 3a9g_A 31 PWSIAPLGGGR-YLVTERPGRLVLISP-SGK-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRV 107 (354)
T ss_dssp EEEEEEEETTE-EEEEETTTEEEEECS-SCE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEE
T ss_pred CeEEEEcCCCe-EEEEeCCCEEEEEeC-CCc-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEE
Confidence 45699999998 555566799999973 332 1111111 1112356889999997 445554433 3 578
Q ss_pred EEEECCCC--e-----EE-EEeecCCCCCceeeEEECCCCCEEEEecC-------------CCcEEEEEcCCc-------
Q 024185 161 YVLDAYGG--E-----KR-CGFSLEPSPNTNTEATFTPDGQYVVSGSG-------------DGTLHAWNINTR------- 212 (271)
Q Consensus 161 ~~~d~~~~--~-----~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-------------dg~i~iwd~~~~------- 212 (271)
..|+.... . .+ ..+.... ......+.|.|||.+.++.+. .|.|.-++....
T Consensus 108 ~r~~~~~~~~~~~~~~~l~~~~~~~~-~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf 186 (354)
T 3a9g_A 108 IRGRLDGSTFKLKEVKTLIDGIPGAY-IHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPF 186 (354)
T ss_dssp EEEEECSSSCCEEEEEEEEEEEECCS-SCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSS
T ss_pred EEEEECCCCcCcCccEEEEEcCCCCC-CcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCC
Confidence 88887654 1 11 1122111 112456999999987776442 245665555321
Q ss_pred --eeEEEecCCcceeEEEEEec-CCcEEEEeC
Q 024185 213 --NEVACWNGNIGVVACLKWAP-RRAMFVAAS 241 (271)
Q Consensus 213 --~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~ 241 (271)
..+.. .++.. ...++|+| +|+++++-.
T Consensus 187 ~~~~i~a-~G~rn-p~Gla~d~~~g~l~v~d~ 216 (354)
T 3a9g_A 187 PNSPIWS-YGHRN-PQGIDWHRASGVMVATEH 216 (354)
T ss_dssp TTCCEEE-ECCSC-CCEEEECTTTCCEEEEEC
T ss_pred CCCcEEE-EccCC-cceEEEeCCCCCEEEEec
Confidence 11222 23433 46899999 677666543
No 313
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.55 E-value=0.0041 Score=49.50 Aligned_cols=144 Identities=19% Similarity=0.268 Sum_probs=80.7
Q ss_pred CcceEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcceEE-EecCCccceEEEEEcCC---CcEEEEEec-C-----CeEE
Q 024185 92 GRPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTF-LVGGDTAEVCDIKFSND---GKSMLLTTT-N-----NNIY 161 (271)
Q Consensus 92 ~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-~~~~~~~~v~~~~~s~~---~~~l~~~~~-d-----~~i~ 161 (271)
....++|.|+|+ ++++..+|.|++++ +++...+... ...........++++|+ +..|+++.. . +.|.
T Consensus 32 ~P~~ia~~pdG~-l~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~ 108 (352)
T 2ism_A 32 VPWALAFLPDGG-MLIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVV 108 (352)
T ss_dssp CEEEEEECTTSC-EEEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEE
T ss_pred CceEEEEcCCCe-EEEEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEE
Confidence 345699999998 45556679999998 3332111111 01112356889999998 555555443 2 6788
Q ss_pred EEECCCCeE-----EE-Eeec-CCCCCceeeEEECCCCCEEEEecC-------------CCcEEEEEcCC----------
Q 024185 162 VLDAYGGEK-----RC-GFSL-EPSPNTNTEATFTPDGQYVVSGSG-------------DGTLHAWNINT---------- 211 (271)
Q Consensus 162 ~~d~~~~~~-----~~-~~~~-~~~~~~v~~~~~~~~~~~l~~~~~-------------dg~i~iwd~~~---------- 211 (271)
.++...++. +. .+.. .........++|.|||.+.++.+. .|.|.-++...
T Consensus 109 r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~ 188 (352)
T 2ism_A 109 RLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFLG 188 (352)
T ss_dssp EEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTT
T ss_pred EEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcccC
Confidence 888764421 11 1221 011112457999999986666432 14566666542
Q ss_pred ----ceeEEEecCCcceeEEEEEec-CCcEEEEe
Q 024185 212 ----RNEVACWNGNIGVVACLKWAP-RRAMFVAA 240 (271)
Q Consensus 212 ----~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~ 240 (271)
...+.. .++.. ...++|+| +++++++-
T Consensus 189 ~~~~~~~i~a-~G~rn-p~g~a~d~~~g~l~v~d 220 (352)
T 2ism_A 189 RRGARPEVYS-LGHRN-PQGLAWHPKTGELFSSE 220 (352)
T ss_dssp CTTSCTTEEE-ECCSE-ECCCEECTTTCCEEEEE
T ss_pred CCCCCccEEE-EcCCC-cccEEEECCCCCEEEEE
Confidence 011111 23433 57899999 66655544
No 314
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.51 E-value=0.011 Score=45.90 Aligned_cols=175 Identities=9% Similarity=0.008 Sum_probs=91.7
Q ss_pred CceEEEEEecCcceeEEE--ecCCcceEEEcCCCCEEEEEecC----CeEEEEeCCCCCCCcceEEEecCCccceEEEEE
Q 024185 71 ALEYGIFVLMLASFQGIL--RLRGRPTVAFDQQGLVFAVAMEA----GAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKF 144 (271)
Q Consensus 71 dg~i~iwd~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~d----~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~ 144 (271)
...+..||..+++-...- ........+..-+++.++.|+.+ ..+.+||..+.+. .....+.........+.+
T Consensus 23 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W--~~~~~~p~~r~~~~~~~~ 100 (306)
T 3ii7_A 23 PQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSW--YSKLGPPTPRDSLAACAA 100 (306)
T ss_dssp TTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBSSSBCCEEEEEETTTTEE--EEEECCSSCCBSCEEEEE
T ss_pred CceEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCCCCCcceEEEEeCCCCeE--EECCCCCccccceeEEEE
Confidence 356778888776643221 11111112222366677777654 5788999987664 111112211112222222
Q ss_pred cCCCcEEEEEecC------CeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEecC---------CCcEEEEEc
Q 024185 145 SNDGKSMLLTTTN------NNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSG---------DGTLHAWNI 209 (271)
Q Consensus 145 s~~~~~l~~~~~d------~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---------dg~i~iwd~ 209 (271)
+++.++.|+.+ ..+.+||..+.+-...-...... .-.+++. -+++.++.|+. -..+.+||+
T Consensus 101 --~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r-~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~yd~ 176 (306)
T 3ii7_A 101 --EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQR-CSHGMVE-ANGLIYVCGGSLGNNVSGRVLNSCEVYDP 176 (306)
T ss_dssp --TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCC-BSCEEEE-ETTEEEEECCEESCTTTCEECCCEEEEET
T ss_pred --CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCc-ceeEEEE-ECCEEEEECCCCCCCCcccccceEEEeCC
Confidence 67777777754 46899999887643321111111 1111222 36677777764 345889999
Q ss_pred CCceeEEE--ecCCcceeEEEEEecCCcEEEEeC-------CeEEEEcCCCCC
Q 024185 210 NTRNEVAC--WNGNIGVVACLKWAPRRAMFVAAS-------SVLSFWIPNPSS 253 (271)
Q Consensus 210 ~~~~~~~~--~~~~~~~v~~~~~s~~~~~l~~~~-------~~v~iw~~~~~~ 253 (271)
.+.+-... +...... .++. .-++++++.|+ ..+.+||+.+.+
T Consensus 177 ~~~~W~~~~~~p~~r~~-~~~~-~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~ 227 (306)
T 3ii7_A 177 ATETWTELCPMIEARKN-HGLV-FVKDKIFAVGGQNGLGGLDNVEYYDIKLNE 227 (306)
T ss_dssp TTTEEEEECCCSSCCBS-CEEE-EETTEEEEECCEETTEEBCCEEEEETTTTE
T ss_pred CCCeEEECCCccchhhc-ceEE-EECCEEEEEeCCCCCCCCceEEEeeCCCCc
Confidence 87654332 2111111 1222 22677777765 358899988754
No 315
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.51 E-value=0.019 Score=44.26 Aligned_cols=174 Identities=6% Similarity=-0.003 Sum_probs=91.8
Q ss_pred ceEEEEEecCcceeEEE--ecCCcceEEEcCCCCEEEEEecC-----CeEEEEeCCCCC---CCcceEEEecCCccceEE
Q 024185 72 LEYGIFVLMLASFQGIL--RLRGRPTVAFDQQGLVFAVAMEA-----GAIKLFDSRSYD---KGPFDTFLVGGDTAEVCD 141 (271)
Q Consensus 72 g~i~iwd~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~---~~~~~~~~~~~~~~~v~~ 141 (271)
..+..||..+++....- ........+...+++.++.|+.+ ..+.+||..+.+ . .....+.........
T Consensus 31 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W--~~~~~~p~~r~~~~~ 108 (301)
T 2vpj_A 31 DVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVW--YSVAPMNVRRGLAGA 108 (301)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCC--EEECCCSSCCBSCEE
T ss_pred eEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCee--EECCCCCCCccceeE
Confidence 46778888776533221 11111122223356777777654 468999998876 4 111112111122222
Q ss_pred EEEcCCCcEEEEEecC-----CeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEecCC-----CcEEEEEcCC
Q 024185 142 IKFSNDGKSMLLTTTN-----NNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGD-----GTLHAWNINT 211 (271)
Q Consensus 142 ~~~s~~~~~l~~~~~d-----~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~ 211 (271)
+.+ +++.++.|+.+ ..+.+||..+.+-...-......... +++. .+++.++.|+.+ ..+.+||+.+
T Consensus 109 ~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~ 184 (301)
T 2vpj_A 109 TTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGA-GLVV-ASGVIYCLGGYDGLNILNSVEKYDPHT 184 (301)
T ss_dssp EEE--TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSC-EEEE-ETTEEEEECCBCSSCBCCCEEEEETTT
T ss_pred EEE--CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccc-eEEE-ECCEEEEECCCCCCcccceEEEEeCCC
Confidence 222 56777777643 46899998877643322211111111 1222 367777777754 4689999887
Q ss_pred ceeEEE--ecCCcceeEEEEEecCCcEEEEeC-------CeEEEEcCCCCC
Q 024185 212 RNEVAC--WNGNIGVVACLKWAPRRAMFVAAS-------SVLSFWIPNPSS 253 (271)
Q Consensus 212 ~~~~~~--~~~~~~~v~~~~~s~~~~~l~~~~-------~~v~iw~~~~~~ 253 (271)
.+-... +....... ++. .-++++++.|+ .++.+||+.+.+
T Consensus 185 ~~W~~~~~~p~~r~~~-~~~-~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 233 (301)
T 2vpj_A 185 GHWTNVTPMATKRSGA-GVA-LLNDHIYVVGGFDGTAHLSSVEAYNIRTDS 233 (301)
T ss_dssp TEEEEECCCSSCCBSC-EEE-EETTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred CcEEeCCCCCcccccc-eEE-EECCEEEEEeCCCCCcccceEEEEeCCCCc
Confidence 654332 21111111 222 23667777775 358899988764
No 316
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.50 E-value=0.021 Score=44.52 Aligned_cols=171 Identities=9% Similarity=0.130 Sum_probs=84.6
Q ss_pred EEEEEecCcceeEEEecCC---cceEEEcCCCCEEEEEecC-------CeEEEEeCCCCCCCcceEEEecCCccceEEEE
Q 024185 74 YGIFVLMLASFQGILRLRG---RPTVAFDQQGLVFAVAMEA-------GAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIK 143 (271)
Q Consensus 74 i~iwd~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~d-------~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~ 143 (271)
+..||..+.+-...-.... ..+++. -+++.++.|+.+ ..+.+||..+.+.. ....+......-. ++
T Consensus 80 ~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~--~~~~~p~~r~~~~-~~ 155 (318)
T 2woz_A 80 FFQLDNVSSEWVGLPPLPSARCLFGLGE-VDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWS--EVKNLPIKVYGHN-VI 155 (318)
T ss_dssp EEEEETTTTEEEECSCBSSCBCSCEEEE-ETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEE--EECCCSSCEESCE-EE
T ss_pred EEEEeCCCCcEEECCCCCccccccceEE-ECCEEEEEcCccCCCCcccceEEEEeCCCCCEe--ECCCCCCcccccE-EE
Confidence 6678887765432211111 112222 266777777653 35888998876531 1111111111111 22
Q ss_pred EcCCCcEEEEEec------CCeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEecCC-----CcEEEEEcCCc
Q 024185 144 FSNDGKSMLLTTT------NNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGD-----GTLHAWNINTR 212 (271)
Q Consensus 144 ~s~~~~~l~~~~~------d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~ 212 (271)
. .+++.++.|+. -..+.+||..+.+-...-... .+..-.+++. -+++.++.|+.+ ..+.+||+.+.
T Consensus 156 ~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p-~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~ 232 (318)
T 2woz_A 156 S-HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMK-TPRSMFGVAI-HKGKIVIAGGVTEDGLSASVEAFDLKTN 232 (318)
T ss_dssp E-ETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCS-SCCBSCEEEE-ETTEEEEEEEEETTEEEEEEEEEETTTC
T ss_pred E-ECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCC-CCcccceEEE-ECCEEEEEcCcCCCCccceEEEEECCCC
Confidence 2 46677777764 245999999887643321111 1111112222 256777777653 35778998776
Q ss_pred eeEE--EecCCcceeEEEEEecCCcEEEEeC----------------CeEEEEcCCCCC
Q 024185 213 NEVA--CWNGNIGVVACLKWAPRRAMFVAAS----------------SVLSFWIPNPSS 253 (271)
Q Consensus 213 ~~~~--~~~~~~~~v~~~~~s~~~~~l~~~~----------------~~v~iw~~~~~~ 253 (271)
+-.. .++...... ++. .-++++++.|+ .++.+||+++.+
T Consensus 233 ~W~~~~~~p~~r~~~-~~~-~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~ 289 (318)
T 2woz_A 233 KWEVMTEFPQERSSI-SLV-SLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKE 289 (318)
T ss_dssp CEEECCCCSSCCBSC-EEE-EETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTE
T ss_pred eEEECCCCCCcccce-EEE-EECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCE
Confidence 5332 222111111 222 23567666664 236778877643
No 317
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.49 E-value=0.028 Score=45.62 Aligned_cols=225 Identities=8% Similarity=0.028 Sum_probs=136.5
Q ss_pred eEEeeecceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecC-cceeEEEecC
Q 024185 13 ALLFARQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLML-ASFQGILRLR 91 (271)
Q Consensus 13 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~ 91 (271)
+++.-..+..+..++.... ..+..+.-.+..+.--.++++.-. +++ +..|+-|+++. ..+++.+..|
T Consensus 78 ~iiALrag~~lQiFnle~K----~klks~~~~e~VvfWkWis~~~l~-----lVT---~taVyHWsi~~~s~P~kvFdR~ 145 (494)
T 1bpo_A 78 KVIALKAGKTLQIFNIEMK----SKMKAHTMTDDVTFWKWISLNTVA-----LVT---DNAVYHWSMEGESQPVKMFDRH 145 (494)
T ss_dssp SCEEEEETTEEEEEETTTT----EEEEEEECSSCCCEEEEEETTEEE-----EEC---SSEEEEEESSSSCCCEEEEECC
T ss_pred cEEEEecCCeEEEEchHHh----hhhcceecCCCceEEEecCCCeEE-----EEc---CCeeEEecccCCCCchhheecc
Confidence 3333334566666666555 444445545555554555554332 222 45699999974 4577777666
Q ss_pred C----cce--EEEcCCCCEEEEEe-------cCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCC---CcEEEEEe
Q 024185 92 G----RPT--VAFDQQGLVFAVAM-------EAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSND---GKSMLLTT 155 (271)
Q Consensus 92 ~----~~~--~~~~~~~~~l~~~~-------~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~---~~~l~~~~ 155 (271)
. ... ...++++++++..+ -.|.+.+|..+.+. ...++||.+....+....+ .+.+..+.
T Consensus 146 ~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~-----sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~ 220 (494)
T 1bpo_A 146 SSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-----SQPIEGHAASFAQFKMEGNAEESTLFCFAV 220 (494)
T ss_dssp GGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCC-----EEEECCSEEEEEEEECTTCSSEEEEEEEEE
T ss_pred hhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccc-----cchheeeeeeeEEEecCCCCCCceEEEEEE
Confidence 3 122 55578888876542 23678999998765 5667888877766655432 23445554
Q ss_pred cC---CeEEEEECCCC---e-----EEEE--eecCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCCceeEEEecCCc
Q 024185 156 TN---NNIYVLDAYGG---E-----KRCG--FSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNI 222 (271)
Q Consensus 156 ~d---~~i~~~d~~~~---~-----~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 222 (271)
.. +.+++.++... . .... +..........++..++.-..++.-+.-|.+++||+.++.++..-+-..
T Consensus 221 r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~ 300 (494)
T 1bpo_A 221 RGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISG 300 (494)
T ss_dssp CSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCS
T ss_pred ecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccceeeeeecccC
Confidence 43 78999998532 1 1111 1111112345567888888888889999999999999999998766556
Q ss_pred ceeEEEEEecC-CcEEEEeC-CeEEEEcCCCCCC
Q 024185 223 GVVACLKWAPR-RAMFVAAS-SVLSFWIPNPSSN 254 (271)
Q Consensus 223 ~~v~~~~~s~~-~~~l~~~~-~~v~iw~~~~~~~ 254 (271)
..|...+-+.. +-++...- |.|.--.++...+
T Consensus 301 ~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~~i 334 (494)
T 1bpo_A 301 ETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENI 334 (494)
T ss_dssp SCEEEEEEETTTTEEEEEETTCEEEEEEECTTTH
T ss_pred CceEEecccCCCCcEEEEccCceEEEEEEccccc
Confidence 66655555544 33444433 6665555555443
No 318
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.49 E-value=0.025 Score=44.96 Aligned_cols=218 Identities=14% Similarity=0.121 Sum_probs=108.3
Q ss_pred eeEEeeecceeeEEEEeeccceeeEE-EEEcccccceEEeeEEecC---CchhhhhhhhhhccC-----ceEEEEEecCc
Q 024185 12 QALLFARQNIILILLESLCGIYQCMI-IEFFATSKGIRRGLFLSAC---LQLMIALCLVLLTTA-----LEYGIFVLMLA 82 (271)
Q Consensus 12 ~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~s~~---~~~~~~~~l~s~~~d-----g~i~iwd~~~~ 82 (271)
..++++...+.+..++ .+...... +..+.........++++|+ +..+ .++-... +.|..++...+
T Consensus 42 G~l~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~l----Yv~~~~~~~~~~~~v~r~~~~~~ 115 (352)
T 2ism_A 42 GGMLIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYV----YAYRTVAEGGLRNQVVRLRHLGE 115 (352)
T ss_dssp SCEEEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEE----EEEEEECTTSSEEEEEEEEECSS
T ss_pred CeEEEEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEE----EEEEecCCCCCccEEEEEEeCCC
Confidence 3466665567777776 33211110 0011222345677999998 4432 2232322 67778887643
Q ss_pred c-----ee-EEEe-----cCCcceEEEcCCCCEEEEEec-------------CCeEEEEeCCCCCC--C--------cce
Q 024185 83 S-----FQ-GILR-----LRGRPTVAFDQQGLVFAVAME-------------AGAIKLFDSRSYDK--G--------PFD 128 (271)
Q Consensus 83 ~-----~~-~~~~-----~~~~~~~~~~~~~~~l~~~~~-------------d~~i~i~d~~~~~~--~--------~~~ 128 (271)
. .+ ..+. .|....++|.|||.+.++.+. .|.|..++....-. . ...
T Consensus 116 ~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~ 195 (352)
T 2ism_A 116 RGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFLGRRGARPE 195 (352)
T ss_dssp CEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTTCTTSCTT
T ss_pred CcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcccCCCCCCcc
Confidence 2 11 1133 123455999999975554332 25666666653100 0 011
Q ss_pred EEEecCCccceEEEEEcC-CCcEEEEEecCCeE------EEEECCCCe------------------EEEEeecCCCCCce
Q 024185 129 TFLVGGDTAEVCDIKFSN-DGKSMLLTTTNNNI------YVLDAYGGE------------------KRCGFSLEPSPNTN 183 (271)
Q Consensus 129 ~~~~~~~~~~v~~~~~s~-~~~~l~~~~~d~~i------~~~d~~~~~------------------~~~~~~~~~~~~~v 183 (271)
.+. .++. ....++|+| ++.++++-.....+ .+.-+..+. +...+..+ ...
T Consensus 196 i~a-~G~r-np~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~---~ap 270 (352)
T 2ism_A 196 VYS-LGHR-NPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFWPQG---FPP 270 (352)
T ss_dssp EEE-ECCS-EECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTC---CCE
T ss_pred EEE-EcCC-CcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEecCCC---CCC
Confidence 222 2332 356788999 56644443222221 122222221 11111111 124
Q ss_pred eeEEECCCCCEEEEecCCCcEEEEEcCCcee------EEEecCCcceeEEEEEecCCcEEEEeC
Q 024185 184 TEATFTPDGQYVVSGSGDGTLHAWNINTRNE------VACWNGNIGVVACLKWAPRRAMFVAAS 241 (271)
Q Consensus 184 ~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~------~~~~~~~~~~v~~~~~s~~~~~l~~~~ 241 (271)
..++| .+|+.+++....+.|...++..... ...+......+..+++.|||.++++..
T Consensus 271 ~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 271 GNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYVTTS 333 (352)
T ss_dssp EEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEEEC
T ss_pred cceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEEEEe
Confidence 45666 4676666666667788887764321 122212235688999999998777664
No 319
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.44 E-value=0.012 Score=46.90 Aligned_cols=147 Identities=12% Similarity=0.156 Sum_probs=80.0
Q ss_pred CcceEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcceEE--EecCCccceEEEEEcCC---CcEEEEEe-c-------CC
Q 024185 92 GRPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTF--LVGGDTAEVCDIKFSND---GKSMLLTT-T-------NN 158 (271)
Q Consensus 92 ~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~--~~~~~~~~v~~~~~s~~---~~~l~~~~-~-------d~ 158 (271)
....++|.|+|++++++...|.|++++.......++... ...........++++|+ +..|+... . ..
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~ 98 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGT 98 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEEE
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCcee
Confidence 445699999998455566689999998543211111100 01112346789999996 44454442 2 23
Q ss_pred eEEEEECCCC--e--EEEE-eecCC----CCCceeeEEECCCCCEEEEecC-------------CCcEEEEEcCCc----
Q 024185 159 NIYVLDAYGG--E--KRCG-FSLEP----SPNTNTEATFTPDGQYVVSGSG-------------DGTLHAWNINTR---- 212 (271)
Q Consensus 159 ~i~~~d~~~~--~--~~~~-~~~~~----~~~~v~~~~~~~~~~~l~~~~~-------------dg~i~iwd~~~~---- 212 (271)
.|..|++..+ + .... +.... .......+.|.|||.+.++.+. .|.|.-++....
T Consensus 99 ~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~~ 178 (353)
T 2g8s_A 99 AVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPDD 178 (353)
T ss_dssp EEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCTT
T ss_pred EEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCCC
Confidence 5666766533 1 1111 11111 1112456999999976665433 246777776422
Q ss_pred ----------eeEEEecCCcceeEEEEEec-CCcEEEEe
Q 024185 213 ----------NEVACWNGNIGVVACLKWAP-RRAMFVAA 240 (271)
Q Consensus 213 ----------~~~~~~~~~~~~v~~~~~s~-~~~~l~~~ 240 (271)
..+.. .++.. ...++|+| +|+++++-
T Consensus 179 npf~~~~~~~~~i~a-~G~rn-p~gl~~d~~~g~l~~~d 215 (353)
T 2g8s_A 179 NPFIKESGVRAEIWS-YGIRN-PQGMAMNPWSNALWLNE 215 (353)
T ss_dssp CTTTTSTTSCTTEEE-ECCSE-EEEEEEETTTTEEEEEE
T ss_pred CCCcCCCCCCccEEE-EcCcC-ccceEEECCCCCEEEEe
Confidence 11222 24443 57999999 66655543
No 320
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.38 E-value=0.022 Score=41.75 Aligned_cols=145 Identities=11% Similarity=0.043 Sum_probs=82.6
Q ss_pred CcceEEEcCCCCEEEEEecCCeEEEEeCCCCCCC-cceE-EEec--CCccceEEEEEcCCCcEEEEEecCCeEEEEECCC
Q 024185 92 GRPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKG-PFDT-FLVG--GDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYG 167 (271)
Q Consensus 92 ~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~-~~~~-~~~~--~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~~ 167 (271)
....++|+|+|.+.++ .+|.++-.+..+.+.. .... ..+. +- ....++.|.|+|.+.++ .||.|+-++-.+
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw-~~F~a~~fD~~G~LYav--~dG~iyr~~pP~ 116 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGW-NQFQFLFFDPNGYLYAV--SKDKLYKASPPQ 116 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCG-GGCSEEEECTTSCEEEE--ETTEEEEESCCC
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEeccccc-ccceEEEECCCCCEEEe--CCCEEEEeCCCc
Confidence 4567999999986555 6888887776553320 0000 1111 11 12578999999987776 569998887543
Q ss_pred CeEEE-----EeecCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCCce------eEEEe-cCCcceeEEEEEecCCc
Q 024185 168 GEKRC-----GFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRN------EVACW-NGNIGVVACLKWAPRRA 235 (271)
Q Consensus 168 ~~~~~-----~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~------~~~~~-~~~~~~v~~~~~s~~~~ 235 (271)
...-. .......-..+..+.++|+|.+.+.. |+.++-....++. ....+ ...-..-.-+.|.|++.
T Consensus 117 ~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~ 194 (236)
T 1tl2_A 117 SDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGT 194 (236)
T ss_dssp STTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSC
T ss_pred CCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCc
Confidence 21110 11111111237889999999877766 7765443332211 01111 12222344577999998
Q ss_pred EEEEeCCe
Q 024185 236 MFVAASSV 243 (271)
Q Consensus 236 ~l~~~~~~ 243 (271)
+.+..++.
T Consensus 195 l~~v~~g~ 202 (236)
T 1tl2_A 195 LFGVQGGK 202 (236)
T ss_dssp EEEEETTE
T ss_pred EEEEeCCe
Confidence 87777553
No 321
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=97.34 E-value=0.033 Score=43.20 Aligned_cols=159 Identities=9% Similarity=0.012 Sum_probs=92.8
Q ss_pred CceEEEEEecCcceeEEEecCCcceEEEcCCCCEEEEEe--c--CCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcC
Q 024185 71 ALEYGIFVLMLASFQGILRLRGRPTVAFDQQGLVFAVAM--E--AGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSN 146 (271)
Q Consensus 71 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 146 (271)
...|+..+++.++... +... ....+++++++|+... . +..|+..++..... . .+..+.. .+++|
T Consensus 87 ~~~Iy~i~~dg~~~~~-l~~~--~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~----~-~lt~~~~----~~~~~ 154 (302)
T 3s25_A 87 RNSLCRIKRNGHGSTV-LDPD--PCIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEK----K-KIKNHYL----FTCNT 154 (302)
T ss_dssp SEEEEEEETTSCCCEE-EECS--CEEEEEEETTEEEEEEESSSSCEEEEEEETTSCCC----E-EEESSCC----CCSEE
T ss_pred CCeEEEEeCCCCcceE-eecC--CccEEEEeCCEEEEEeecCCCCceEEEEECCCCCe----E-EEeCCCc----eEeeE
Confidence 3567777777665333 3222 2347788999888876 2 34566666654442 2 2222322 45678
Q ss_pred CCcEEEEEec-CCeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEecCC--CcEEEEEcCCceeEEEecCCcc
Q 024185 147 DGKSMLLTTT-NNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGD--GTLHAWNINTRNEVACWNGNIG 223 (271)
Q Consensus 147 ~~~~l~~~~~-d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--g~i~iwd~~~~~~~~~~~~~~~ 223 (271)
+++.|+-.+. ...|...++..+.....+. .. .. ..++|++.+|+....+ ..|..-++.... ...+...
T Consensus 155 ~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~---~~--~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~-~~~Lt~~-- 225 (302)
T 3s25_A 155 SDRYFYYNNPKNGQLYRYDTASQSEALFYD---CN--CY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPN-PVVLTEA-- 225 (302)
T ss_dssp ETTEEEEECTTTCCEEEEETTTTEEEEEEC---SC--EE-EEEEEETTEEEEEEGGGTTEEEEECSSSCC-CEECSCS--
T ss_pred ECCEEEEEeCCCceEEEEECCCCCEEEEeC---CC--cc-ceeeecCCEEEEEEcCCCcEEEEEECCCCC-eEEEeCC--
Confidence 8888887765 6788888987766443332 11 22 2356999998876543 356666665444 3334322
Q ss_pred eeEEEEEecCCcEEEEeC----CeEEEEcCCCC
Q 024185 224 VVACLKWAPRRAMFVAAS----SVLSFWIPNPS 252 (271)
Q Consensus 224 ~v~~~~~s~~~~~l~~~~----~~v~iw~~~~~ 252 (271)
.+ ..|+|++.+|..++ +.|..-+++..
T Consensus 226 ~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~DG~ 256 (302)
T 3s25_A 226 NI--EHYNVYGSLIFYQRGGDNPALCVVKNDGT 256 (302)
T ss_dssp CE--EEEEEETTEEEEEECSSSCEEEEEETTSC
T ss_pred Cc--ceEEECCCEEEEEECCCCcEEEEEECCCC
Confidence 22 34788888777652 44666666554
No 322
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=97.22 E-value=0.046 Score=43.27 Aligned_cols=142 Identities=6% Similarity=-0.041 Sum_probs=67.3
Q ss_pred CeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEec------CCeEEEEEC--CCCeEEEEeecCCCC-Cc
Q 024185 112 GAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTT------NNNIYVLDA--YGGEKRCGFSLEPSP-NT 182 (271)
Q Consensus 112 ~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~------d~~i~~~d~--~~~~~~~~~~~~~~~-~~ 182 (271)
..+.+||..+.+. .....+......-.+++.. +++.++.|+. ...+..||+ .+.+-.. +.....+ ..
T Consensus 168 ~~v~~yd~~~~~W--~~~~~~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~-~~~~~~~~~~ 243 (357)
T 2uvk_A 168 KFLLSFDPSTQQW--SYAGESPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNK-LAPVSSPDGV 243 (357)
T ss_dssp CEEEEEETTTTEE--EEEEECSSCCCBSCEEEEE-TTEEEEECCEEETTEECCCEEEEECC---CEEEE-CCCSSTTTCC
T ss_pred ccEEEEeCCCCcE--EECCCCCCCCcccccEEEE-CCEEEEEeeecCCCcccCceEEEEecCCCCcEEe-cCCCCCCccc
Confidence 5799999988764 1122222111110222222 5666677653 345777887 4443222 1111111 11
Q ss_pred eeeEEECCCCCEEEEecCC----------------------CcEEEEEcCCcee--EEEecCCcceeEEEEEecCCcEEE
Q 024185 183 NTEATFTPDGQYVVSGSGD----------------------GTLHAWNINTRNE--VACWNGNIGVVACLKWAPRRAMFV 238 (271)
Q Consensus 183 v~~~~~~~~~~~l~~~~~d----------------------g~i~iwd~~~~~~--~~~~~~~~~~v~~~~~s~~~~~l~ 238 (271)
....+...+++.++.|+.+ ..+.+||+.+.+- +..+......-. +...++++++
T Consensus 244 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~--~~~~~~~i~v 321 (357)
T 2uvk_A 244 AGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGV--SLPWNNSLLI 321 (357)
T ss_dssp BSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSE--EEEETTEEEE
T ss_pred ccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCcccce--eEEeCCEEEE
Confidence 1111233466777777642 2578899876543 333432222212 2334677777
Q ss_pred EeC--------CeEEEEcCCCCCCCcCCC
Q 024185 239 AAS--------SVLSFWIPNPSSNSTDES 259 (271)
Q Consensus 239 ~~~--------~~v~iw~~~~~~~~~~~~ 259 (271)
.|+ .++.++++++++......
T Consensus 322 ~GG~~~~~~~~~~v~~l~~~~~~~~~~~~ 350 (357)
T 2uvk_A 322 IGGETAGGKAVTDSVLITVKDNKVTVQNL 350 (357)
T ss_dssp EEEECGGGCEEEEEEEEEC-CCSCEEEC-
T ss_pred EeeeCCCCCEeeeEEEEEEcCcEeEeeec
Confidence 775 236677888877655443
No 323
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.22 E-value=0.05 Score=42.68 Aligned_cols=190 Identities=11% Similarity=0.042 Sum_probs=100.4
Q ss_pred cceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEec-----CCcceEEEcCCCCEEEEEecCCeEEEEeC
Q 024185 45 KGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILRL-----RGRPTVAFDQQGLVFAVAMEAGAIKLFDS 119 (271)
Q Consensus 45 ~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~~~d~~i~i~d~ 119 (271)
...+..+.+.+ +.. ++ ++..+.|.. ..+.++.-..... .....+.+.++++.++++ .+|.|+. ..
T Consensus 79 ~~~~~~i~~~~-~~~-----~~-~g~~g~i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~-S~ 148 (327)
T 2xbg_A 79 DYRFNSVSFQG-NEG-----WI-VGEPPIMLH-TTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYR-TK 148 (327)
T ss_dssp CCEEEEEEEET-TEE-----EE-EEETTEEEE-ESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEE-ES
T ss_pred CccEEEEEecC-CeE-----EE-EECCCeEEE-ECCCCCCceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEE-Ec
Confidence 44677788876 333 22 345564432 2233433222221 123346666666655554 4565432 12
Q ss_pred CCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEecCCeEEEEEC--CCCeEEEEeecCCCCCceeeEEECCCCCEEEE
Q 024185 120 RSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDA--YGGEKRCGFSLEPSPNTNTEATFTPDGQYVVS 197 (271)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 197 (271)
..++. . ..........+..+.+.|++.+++.+...+..+-.|- .+.+.+. . .....+..+.++++++.++.
T Consensus 149 DgG~t--W-~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~---~-~~~~~~~~~~~~~~g~~~~~ 221 (327)
T 2xbg_A 149 DSGKN--W-QALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHN---R-TTSRRLHNMGFTPDGRLWMI 221 (327)
T ss_dssp STTSS--E-EEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEEE---C-CSSSCEEEEEECTTSCEEEE
T ss_pred CCCCC--C-EEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeECC---C-CCCCccceeEECCCCCEEEE
Confidence 22332 1 1122344567889999999887766654433333442 2233321 1 11234788899999876654
Q ss_pred ecCCCcEEEEEcCCceeEEEecC----CcceeEEEEEecCCcEEEEeC-CeEEEEcCCCCC
Q 024185 198 GSGDGTLHAWNINTRNEVACWNG----NIGVVACLKWAPRRAMFVAAS-SVLSFWIPNPSS 253 (271)
Q Consensus 198 ~~~dg~i~iwd~~~~~~~~~~~~----~~~~v~~~~~s~~~~~l~~~~-~~v~iw~~~~~~ 253 (271)
+.+|.++..+...++.-..+.. +...+.++.+.+++.+++++. +.+ .+..+.++
T Consensus 222 -~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~g~i-~~S~DgG~ 280 (327)
T 2xbg_A 222 -VNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGAGAL-LCSQDGGQ 280 (327)
T ss_dssp -ETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEESTTCE-EEESSTTS
T ss_pred -eCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeCCCeE-EEeCCCCc
Confidence 4567777764332443332221 223578899999888888876 655 44444443
No 324
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.14 E-value=0.056 Score=41.67 Aligned_cols=173 Identities=10% Similarity=0.089 Sum_probs=88.8
Q ss_pred ceEEEEEecCcceeEEE--ecCCc-ceEEEcCCCCEEEEEecC-----CeEEEEeCCCCCCCcceEEEecCCccceEEEE
Q 024185 72 LEYGIFVLMLASFQGIL--RLRGR-PTVAFDQQGLVFAVAMEA-----GAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIK 143 (271)
Q Consensus 72 g~i~iwd~~~~~~~~~~--~~~~~-~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~ 143 (271)
..+..||+.+.+....- +.... ..++. -+++.++.|+.+ ..+..||..+.+.. ....+...........
T Consensus 30 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~--~~~~~p~~r~~~~~~~ 106 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVAELPSRRCRAGMVY-MAGLVFAVGGFNGSLRVRTVDSYDPVKDQWT--SVANMRDRRSTLGAAV 106 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEESCBCSSSBCCCEEEEETTTTEEE--EECCCSSCCBSCEEEE
T ss_pred CcEEEEcCcCCcEeEcccCCcccccceEEE-ECCEEEEEeCcCCCccccceEEECCCCCcee--eCCCCCccccceEEEE
Confidence 34777888776533221 11111 12222 266677777644 35889998876531 1111111111122222
Q ss_pred EcCCCcEEEEEecC-----CeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEecCC-------CcEEEEEcCC
Q 024185 144 FSNDGKSMLLTTTN-----NNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGD-------GTLHAWNINT 211 (271)
Q Consensus 144 ~s~~~~~l~~~~~d-----~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-------g~i~iwd~~~ 211 (271)
-+++.++.|+.+ ..+.+||..+.+-...-.... +..-.+++. -+++.++.|+.+ ..+.+||+.+
T Consensus 107 --~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~-~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~ 182 (302)
T 2xn4_A 107 --LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNT-RRSSVGVGV-VGGLLYAVGGYDVASRQCLSTVECYNATT 182 (302)
T ss_dssp --ETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSS-CCBSCEEEE-ETTEEEEECCEETTTTEECCCEEEEETTT
T ss_pred --ECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCC-cccCceEEE-ECCEEEEEeCCCCCCCccccEEEEEeCCC
Confidence 256777777755 358889988776433211111 111111222 366777777643 3588999987
Q ss_pred ceeEEE--ecCCcceeEEEEEecCCcEEEEeC-------CeEEEEcCCCCC
Q 024185 212 RNEVAC--WNGNIGVVACLKWAPRRAMFVAAS-------SVLSFWIPNPSS 253 (271)
Q Consensus 212 ~~~~~~--~~~~~~~v~~~~~s~~~~~l~~~~-------~~v~iw~~~~~~ 253 (271)
.+-... +....... ++. .-++++++.|+ +.+.+||+++.+
T Consensus 183 ~~W~~~~~~p~~r~~~-~~~-~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 231 (302)
T 2xn4_A 183 NEWTYIAEMSTRRSGA-GVG-VLNNLLYAVGGHDGPLVRKSVEVYDPTTNA 231 (302)
T ss_dssp TEEEEECCCSSCCBSC-EEE-EETTEEEEECCBSSSSBCCCEEEEETTTTE
T ss_pred CcEEECCCCccccccc-cEE-EECCEEEEECCCCCCcccceEEEEeCCCCC
Confidence 654332 22111111 222 22677777775 358899987754
No 325
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.13 E-value=0.037 Score=42.89 Aligned_cols=173 Identities=9% Similarity=0.030 Sum_probs=89.0
Q ss_pred ceEEEEEecCcceeEEE--ecCCc-ceEEEcCCCCEEEEEec----C-----CeEEEEeCCCCCCCcceEEEecCCccce
Q 024185 72 LEYGIFVLMLASFQGIL--RLRGR-PTVAFDQQGLVFAVAME----A-----GAIKLFDSRSYDKGPFDTFLVGGDTAEV 139 (271)
Q Consensus 72 g~i~iwd~~~~~~~~~~--~~~~~-~~~~~~~~~~~l~~~~~----d-----~~i~i~d~~~~~~~~~~~~~~~~~~~~v 139 (271)
..+.+||..+++....- +.... ..++. .+++.++.|+. + ..+.+||..+.+.... ..+.......
T Consensus 39 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~--~~~p~~r~~~ 115 (308)
T 1zgk_A 39 SYLEAYNPSNGTWLRLADLQVPRSGLAGCV-VGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPC--APMSVPRNRI 115 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEEC--CCCSSCCBTC
T ss_pred ceEEEEcCCCCeEeECCCCCcccccceEEE-ECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeEC--CCCCcCcccc
Confidence 45788888776643321 11111 11222 26666666664 2 4688999887653111 1111111122
Q ss_pred EEEEEcCCCcEEEEEecC-----CeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEecCC-----CcEEEEEc
Q 024185 140 CDIKFSNDGKSMLLTTTN-----NNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGD-----GTLHAWNI 209 (271)
Q Consensus 140 ~~~~~s~~~~~l~~~~~d-----~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~ 209 (271)
..+.+ +++.++.|+.+ ..+.+||..+.+-...-...........+.+ +++.++.|+.+ ..+.+||+
T Consensus 116 ~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~ 191 (308)
T 1zgk_A 116 GVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYP 191 (308)
T ss_dssp EEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEET
T ss_pred EEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeC
Confidence 22222 56777776643 4688999887764332111111111112222 66777777754 46899998
Q ss_pred CCceeEEE--ecCCcceeEEEEEecCCcEEEEeC-------CeEEEEcCCCCC
Q 024185 210 NTRNEVAC--WNGNIGVVACLKWAPRRAMFVAAS-------SVLSFWIPNPSS 253 (271)
Q Consensus 210 ~~~~~~~~--~~~~~~~v~~~~~s~~~~~l~~~~-------~~v~iw~~~~~~ 253 (271)
.+.+-... +.........+. . ++++++.|+ .++.+||+.+.+
T Consensus 192 ~~~~W~~~~~~p~~r~~~~~~~-~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 242 (308)
T 1zgk_A 192 ERNEWRMITAMNTIRSGAGVCV-L-HNCIYAAGGYDGQDQLNSVERYDVETET 242 (308)
T ss_dssp TTTEEEECCCCSSCCBSCEEEE-E-TTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred CCCeEeeCCCCCCccccceEEE-E-CCEEEEEeCCCCCCccceEEEEeCCCCc
Confidence 87654322 211111112222 2 677777775 358999987764
No 326
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=97.08 E-value=0.00045 Score=54.41 Aligned_cols=109 Identities=10% Similarity=0.097 Sum_probs=70.2
Q ss_pred hhhhccCceEEEEEecCcceeEEEecCC-cceEEEc----CCCCEEEEE--ecCCeEEEEeCCCCCCCcceEEEecC---
Q 024185 65 LVLLTTALEYGIFVLMLASFQGILRLRG-RPTVAFD----QQGLVFAVA--MEAGAIKLFDSRSYDKGPFDTFLVGG--- 134 (271)
Q Consensus 65 l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~~----~~~~~l~~~--~~d~~i~i~d~~~~~~~~~~~~~~~~--- 134 (271)
++.++.||.|.-.|.++|+.+..++... .+.+... +.+..++.+ +.||.++.++..++.. ...+.-
T Consensus 13 V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~----~~~~~~~~l 88 (339)
T 2be1_A 13 LIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQ----KLPLSIRQL 88 (339)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEE----EEEEEHHHH
T ss_pred EEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcE----Eeeeccccc
Confidence 5578899999999999999988887651 1223221 112234444 5799999999887653 222211
Q ss_pred -CccceEE---EEE-c----CCCcEEEEEecCCeEEEEECCCCeEEEEeecC
Q 024185 135 -DTAEVCD---IKF-S----NDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLE 177 (271)
Q Consensus 135 -~~~~v~~---~~~-s----~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~ 177 (271)
...++.. ... . ..+..+++++.+|++...|+++|+.+..+...
T Consensus 89 v~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~ 140 (339)
T 2be1_A 89 VSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPG 140 (339)
T ss_dssp HTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTT
T ss_pred eeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecC
Confidence 0111211 001 0 14567899999999999999999999988654
No 327
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.06 E-value=0.12 Score=44.38 Aligned_cols=194 Identities=9% Similarity=-0.055 Sum_probs=113.3
Q ss_pred eEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEec--CCcceEEEcCCCCEEEEE-ecCCeEEEEeCCCCC
Q 024185 47 IRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILRL--RGRPTVAFDQQGLVFAVA-MEAGAIKLFDSRSYD 123 (271)
Q Consensus 47 ~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~ 123 (271)
....+++.+.+..+ +++-...+.|+.++++.......+.. .....+++.+.++.|+.+ +..+.|.+.++....
T Consensus 350 ~~~~ld~d~~~~~l----y~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~ 425 (619)
T 3s94_A 350 HAIAIDYDPVEGYI----YWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTM 425 (619)
T ss_dssp SEEEEEEETTTTEE----EEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred ccEEEEEEcCCCeE----EEEeCCCCeEEEEEcCCCccEEEEECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCCe
Confidence 45568888855543 33545677888888865443333332 234568998766656555 456789999987654
Q ss_pred CCcceEEEecCCccceEEEEEcCCCcEEEEEe--cCCeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEec-C
Q 024185 124 KGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTT--TNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGS-G 200 (271)
Q Consensus 124 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~ 200 (271)
. .......-.....+++.|....|+.+. ..+.|...++... ....+.. ..-.....+++++++..|+.+. .
T Consensus 426 ~----~~l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~-~~~~l~~-~~l~~P~GlalD~~~~~LY~aD~~ 499 (619)
T 3s94_A 426 R----KILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGS-DRVVLVN-TSLGWPNGLALDYDEGKIYWGDAK 499 (619)
T ss_dssp C----EEEECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-SCEEEEC-SSCSCEEEEEEETTTTEEEEEETT
T ss_pred E----EEEEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCC-ccEEEEe-CCCCCCeeeEEcccCCEEEEEECC
Confidence 3 222333446688999999644454443 2467777776533 2233322 1123477899999777777664 4
Q ss_pred CCcEEEEEcCCceeEEEecCCcceeEEEEEecCCcEEEEeC---CeEEEEcCCCC
Q 024185 201 DGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS---SVLSFWIPNPS 252 (271)
Q Consensus 201 dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~---~~v~iw~~~~~ 252 (271)
.+.|...++........+........+++...+ .|..+. +.|...|..++
T Consensus 500 ~~~I~~~~~dG~~~~~~~~~~l~~P~glav~~~--~ly~tD~~~~~I~~~~k~~g 552 (619)
T 3s94_A 500 TDKIEVMNTDGTGRRVLVEDKIPHIFGFTLLGD--YVYWTDWQRRSIERVHKRSA 552 (619)
T ss_dssp TTEEEEEESSSCCCEEEEECCCCSSCCEEEETT--EEEEECTTSSCEEEEESSSC
T ss_pred CCEEEEEecCCCceEEEeccCCCCcEEEEEECC--EEEEeecCCCeEEEEEcCCC
Confidence 578999988543322222222222345665533 455444 55666666655
No 328
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.01 E-value=0.058 Score=41.89 Aligned_cols=174 Identities=7% Similarity=-0.083 Sum_probs=89.8
Q ss_pred ceEEEEEecCcceeE-EEecC--CcceEEEcCCCCEEEEEec-----C------CeEEEEeCCCCCCCcceEEEecCCcc
Q 024185 72 LEYGIFVLMLASFQG-ILRLR--GRPTVAFDQQGLVFAVAME-----A------GAIKLFDSRSYDKGPFDTFLVGGDTA 137 (271)
Q Consensus 72 g~i~iwd~~~~~~~~-~~~~~--~~~~~~~~~~~~~l~~~~~-----d------~~i~i~d~~~~~~~~~~~~~~~~~~~ 137 (271)
..+..||..+++-.. .++.. .........+++.++.|+. . ..+..||..+.+.. ....+.....
T Consensus 13 ~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~--~~~~~p~~r~ 90 (315)
T 4asc_A 13 EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWL--GMPPLPSPRC 90 (315)
T ss_dssp TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEE--ECCCBSSCEE
T ss_pred CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEE--ECCCCCcchh
Confidence 568889998877433 11111 1122334457777777773 1 13788898876531 1111111111
Q ss_pred ceEEEEEcCCCcEEEEEecC--------CeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEecC-C-----Cc
Q 024185 138 EVCDIKFSNDGKSMLLTTTN--------NNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSG-D-----GT 203 (271)
Q Consensus 138 ~v~~~~~s~~~~~l~~~~~d--------~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d-----g~ 203 (271)
....+.+ +++.++.|+.+ ..+.+||..+.+-...-...... .-.+++ ..+++.++.|+. + ..
T Consensus 91 ~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r-~~~~~~-~~~~~iyv~GG~~~~~~~~~~ 166 (315)
T 4asc_A 91 LFGLGEA--LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVV-YGHTVL-SHMDLVYVIGGKGSDRKCLNK 166 (315)
T ss_dssp SCEEEEE--TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCC-BSCEEE-EETTEEEEECCBCTTSCBCCC
T ss_pred ceeEEEE--CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcc-cceeEE-EECCEEEEEeCCCCCCcccce
Confidence 1112222 56777777632 45899999877543221111111 111122 246677777776 2 46
Q ss_pred EEEEEcCCceeEEE--ecCCcceeEEEEEecCCcEEEEeC-------CeEEEEcCCCCC
Q 024185 204 LHAWNINTRNEVAC--WNGNIGVVACLKWAPRRAMFVAAS-------SVLSFWIPNPSS 253 (271)
Q Consensus 204 i~iwd~~~~~~~~~--~~~~~~~v~~~~~s~~~~~l~~~~-------~~v~iw~~~~~~ 253 (271)
+.+||+.+.+-... +....... ++. .-++++++.|+ ..+.+||+.+.+
T Consensus 167 ~~~yd~~~~~W~~~~~~p~~r~~~-~~~-~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 223 (315)
T 4asc_A 167 MCVYDPKKFEWKELAPMQTARSLF-GAT-VHDGRIIVAAGVTDTGLTSSAEVYSITDNK 223 (315)
T ss_dssp EEEEETTTTEEEECCCCSSCCBSC-EEE-EETTEEEEEEEECSSSEEEEEEEEETTTTE
T ss_pred EEEEeCCCCeEEECCCCCCchhce-EEE-EECCEEEEEeccCCCCccceEEEEECCCCe
Confidence 89999887654332 22111111 222 22677777765 258889987764
No 329
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.00 E-value=0.083 Score=41.24 Aligned_cols=194 Identities=10% Similarity=0.096 Sum_probs=116.1
Q ss_pred eEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEecCC-cceEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcceE
Q 024185 51 LFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILRLRG-RPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDT 129 (271)
Q Consensus 51 ~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 129 (271)
.-.+|..+.++ .- ...++.++|+++.+.++.+...+ +..-.|-.+ +.|+..+ +..|+-|++.... .|.+.
T Consensus 72 AIMnP~~~ViA-----Lr-ag~~LQiFnletK~klks~~~~e~VvfWkWis~-~~L~lVT-~taVyHWs~~~~s-~P~kv 142 (365)
T 2xzh_A 72 AIMNPASKVIA-----LK-AGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISL-NTVALVT-DNAVYHWSMEGES-QPVKM 142 (365)
T ss_dssp EEECSSSSEEE-----EE-ETTEEEEEETTTTEEEEEEECSSCEEEEEECSS-SEEEEEE-SSEEEEEESSTTC-CCEEE
T ss_pred eeeCCCccEEE-----Ee-cCCeEEEechHHhhhhcceecCCccEEEEecCC-CeEEEEc-CCcEEEEcccCCC-CCcee
Confidence 44578777532 22 26789999999999888887754 444566543 4466555 5689999998633 45555
Q ss_pred EEecCC--ccceEEEEEcCCCcEEEEEec-------CCeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCC-----EE
Q 024185 130 FLVGGD--TAEVCDIKFSNDGKSMLLTTT-------NNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQ-----YV 195 (271)
Q Consensus 130 ~~~~~~--~~~v~~~~~s~~~~~l~~~~~-------d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-----~l 195 (271)
+..... ...|.....+++.++++..+- .|.+.+|..+.+. -+.+++|... . ..+-.+|+ .+
T Consensus 143 FdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~-sQ~ieGhaa~--F--~~~~~~g~~~~~~lf 217 (365)
T 2xzh_A 143 FDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAAS--F--AQFKMEGNAEESTLF 217 (365)
T ss_dssp EECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTE-EEEECCSEEE--E--EEECCTTCSSCEEEE
T ss_pred eecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccc-cceeeeeeee--e--EEEecCCCCCCceEE
Confidence 442211 245777788899998876542 4788999976543 3445555421 1 22222222 33
Q ss_pred EEecC---CCcEEEEEcCCc---ee-----EEE-e-cC--CcceeEEEEEecCCcEEEEe--CCeEEEEcCCCCCCCcCC
Q 024185 196 VSGSG---DGTLHAWNINTR---NE-----VAC-W-NG--NIGVVACLKWAPRRAMFVAA--SSVLSFWIPNPSSNSTDE 258 (271)
Q Consensus 196 ~~~~~---dg~i~iwd~~~~---~~-----~~~-~-~~--~~~~v~~~~~s~~~~~l~~~--~~~v~iw~~~~~~~~~~~ 258 (271)
+.+.. .+.++|-++... .. ... + +. ...-.-++..|+....+..- .|-+++||++++.++-..
T Consensus 218 ~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~n 297 (365)
T 2xzh_A 218 CFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMN 297 (365)
T ss_dssp EEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred EEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEe
Confidence 33222 258999988432 11 111 1 11 12223477777765544433 399999999999876544
No 330
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.98 E-value=0.061 Score=39.42 Aligned_cols=141 Identities=11% Similarity=0.029 Sum_probs=81.4
Q ss_pred CCEEEEEecCCeEEEEeCCCCCCCcc--eEEEecC-CccceEEEEEcCCCcEEEEEecCCeEEEEECCCCeE------EE
Q 024185 102 GLVFAVAMEAGAIKLFDSRSYDKGPF--DTFLVGG-DTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEK------RC 172 (271)
Q Consensus 102 ~~~l~~~~~d~~i~i~d~~~~~~~~~--~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~~~~~------~~ 172 (271)
+..|+...+| +++.=.+........ ...++.. .-..+.+++|+|+|.+.++ .+|.++-.+..+.+. -.
T Consensus 4 ~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t 80 (236)
T 1tl2_A 4 ESMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAK 80 (236)
T ss_dssp CCCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCE
T ss_pred ceEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCccEEEE--eCCeEEEECCCCCCccccccccc
Confidence 4456666666 665555544442111 1222221 1246789999999986666 778877777644211 11
Q ss_pred EeecCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCCceeE-------EEecCCcceeEEEEEecCCcEEEEeCCeEE
Q 024185 173 GFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEV-------ACWNGNIGVVACLKWAPRRAMFVAASSVLS 245 (271)
Q Consensus 173 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~-------~~~~~~~~~v~~~~~s~~~~~l~~~~~~v~ 245 (271)
.+ +...-.....+.|.|+|.+.++ .||.|+-++..+...- ..-..--..+..+.+.|+|.+.+..++.++
T Consensus 81 ~I-G~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~dg~ly 157 (236)
T 1tl2_A 81 KI-GNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVHGQQFY 157 (236)
T ss_dssp EE-ECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEETTEEE
T ss_pred Ee-cccccccceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEeCCcEE
Confidence 11 1111112467899999987777 5698988876442211 111111235789999999998888777654
Q ss_pred EEc
Q 024185 246 FWI 248 (271)
Q Consensus 246 iw~ 248 (271)
-+.
T Consensus 158 r~~ 160 (236)
T 1tl2_A 158 KAL 160 (236)
T ss_dssp EEC
T ss_pred ecC
Confidence 333
No 331
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.90 E-value=0.099 Score=40.62 Aligned_cols=171 Identities=9% Similarity=-0.016 Sum_probs=88.3
Q ss_pred EEEEEecCcceeEEEecC----CcceEEEcCCCCEEEEEec----CC-------eEEEEeCCCCCCCcceEEEecCCccc
Q 024185 74 YGIFVLMLASFQGILRLR----GRPTVAFDQQGLVFAVAME----AG-------AIKLFDSRSYDKGPFDTFLVGGDTAE 138 (271)
Q Consensus 74 i~iwd~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~~~----d~-------~i~i~d~~~~~~~~~~~~~~~~~~~~ 138 (271)
+..||..+++... .... .........++..++.|+. ++ .+..||..+.+... ...+......
T Consensus 26 ~~~yd~~~~~W~~-~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~--~~~~p~~r~~ 102 (318)
T 2woz_A 26 AVAYDPMENECYL-TALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVG--LPPLPSARCL 102 (318)
T ss_dssp EEEEETTTTEEEE-EEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEE--CSCBSSCBCS
T ss_pred eEEECCCCCceec-ccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEE--CCCCCccccc
Confidence 7788888776543 2211 1122334456777777773 11 27788887765311 1111111111
Q ss_pred eEEEEEcCCCcEEEEEecC-------CeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEecC------CCcEE
Q 024185 139 VCDIKFSNDGKSMLLTTTN-------NNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSG------DGTLH 205 (271)
Q Consensus 139 v~~~~~s~~~~~l~~~~~d-------~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------dg~i~ 205 (271)
.....+ +++.++.|+.+ ..+.+||..+.+-...-...... .-.+++. .+++.++.|+. -..+.
T Consensus 103 ~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r-~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~ 178 (318)
T 2woz_A 103 FGLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKV-YGHNVIS-HNGMIYCLGGKTDDKKCTNRVF 178 (318)
T ss_dssp CEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCE-ESCEEEE-ETTEEEEECCEESSSCBCCCEE
T ss_pred cceEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcc-cccEEEE-ECCEEEEEcCCCCCCCccceEE
Confidence 122222 56777777753 35888998877643321111111 0111222 46777777764 23699
Q ss_pred EEEcCCceeEEE--ecCCcceeEEEEEecCCcEEEEeC-------CeEEEEcCCCCC
Q 024185 206 AWNINTRNEVAC--WNGNIGVVACLKWAPRRAMFVAAS-------SVLSFWIPNPSS 253 (271)
Q Consensus 206 iwd~~~~~~~~~--~~~~~~~v~~~~~s~~~~~l~~~~-------~~v~iw~~~~~~ 253 (271)
+||+.+.+-... +...... .++.. -++++++.|+ ..+.+||+++.+
T Consensus 179 ~yd~~~~~W~~~~~~p~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 179 IYNPKKGDWKDLAPMKTPRSM-FGVAI-HKGKIVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp EEETTTTEEEEECCCSSCCBS-CEEEE-ETTEEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred EEcCCCCEEEECCCCCCCccc-ceEEE-ECCEEEEEcCcCCCCccceEEEEECCCCe
Confidence 999987654332 2211111 12222 3667777764 347889988765
No 332
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.88 E-value=0.21 Score=46.29 Aligned_cols=171 Identities=11% Similarity=0.026 Sum_probs=103.0
Q ss_pred ceEEEEEecCcceeEEEecCC---cce---EEEcCC-CCEEEEEe----------cCCeEEEEeCCCCCCCcceEEEecC
Q 024185 72 LEYGIFVLMLASFQGILRLRG---RPT---VAFDQQ-GLVFAVAM----------EAGAIKLFDSRSYDKGPFDTFLVGG 134 (271)
Q Consensus 72 g~i~iwd~~~~~~~~~~~~~~---~~~---~~~~~~-~~~l~~~~----------~d~~i~i~d~~~~~~~~~~~~~~~~ 134 (271)
+.+++.|..+.+.+..++... +.+ +.|..+ ..++++|. ..|.|++|++..++.+.+....
T Consensus 807 s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~--- 883 (1158)
T 3ei3_A 807 HNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKE--- 883 (1158)
T ss_dssp EEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEE---
T ss_pred EEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEE---
Confidence 568888988888777665443 233 334333 46888885 3478999998755432222222
Q ss_pred CccceEEEEEcCCCcEEEEEecCCeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEecCCCcEEEEE--cCCc
Q 024185 135 DTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWN--INTR 212 (271)
Q Consensus 135 ~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd--~~~~ 212 (271)
.++++++++-- +|+ |++|- ..++++|++...+.++ ......+ .+..+.....+++++.|..-..+.++. ...+
T Consensus 884 v~g~v~al~~~-~g~-Lla~i-g~~l~vy~l~~~~~L~-~~~~~~~-~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~~ 958 (1158)
T 3ei3_A 884 VKGAVYSMVEF-NGK-LLASI-NSTVRLYEWTTEKELR-TECNHYN-NIMALYLKTKGDFILVGDLMRSVLLLAYKPMEG 958 (1158)
T ss_dssp ESSCEEEEEEE-TTE-EEEEE-TTEEEEEEECTTSCEE-EEEEECC-CSCEEEEEEETTEEEEEESSBCEEEEEEETTTT
T ss_pred cCCcCEEEeee-CCE-EEEEc-CCEEEEEECCCCceEE-EEeeccc-cEEEEEEeccCCEEEEEEhhheEEEEEEEcCCC
Confidence 35778887744 354 44433 4789999998765444 2111111 133334444578899998877777654 4344
Q ss_pred eeEEEe-cCCcceeEEEEEecCCcEEEEeC--CeEEEEcCCC
Q 024185 213 NEVACW-NGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNP 251 (271)
Q Consensus 213 ~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~--~~v~iw~~~~ 251 (271)
+....- ..+..+++++.+-.++. ++.++ |++.+...+.
T Consensus 959 ~L~~~a~D~~~~~vta~~~ld~~t-~l~aD~~gNl~vl~~~~ 999 (1158)
T 3ei3_A 959 NFEEIARDFNPNWMSAVEILDDDN-FLGAENAFNLFVCQKDS 999 (1158)
T ss_dssp EEEEEEECCSCBCEEEEEEEETTE-EEEEETTSEEEEEEECT
T ss_pred eEEEEEeecccccEEEEEEEccCc-EEEEcCCCcEEEEecCC
Confidence 433322 33456788999876664 44454 8888887765
No 333
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.87 E-value=0.065 Score=44.18 Aligned_cols=104 Identities=11% Similarity=0.026 Sum_probs=56.8
Q ss_pred eEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeE--EEec--------CCcceEEEcCC---CCEEEEEec---
Q 024185 47 IRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQG--ILRL--------RGRPTVAFDQQ---GLVFAVAME--- 110 (271)
Q Consensus 47 ~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~--~~~~--------~~~~~~~~~~~---~~~l~~~~~--- 110 (271)
.-..+++.|+|+. +++-...+.|++++..+++... .+.. .+...++|+|+ +..|+++..
T Consensus 28 ~P~~~a~~pdG~l-----~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~ 102 (454)
T 1cru_A 28 KPHALLWGPDNQI-----WLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKN 102 (454)
T ss_dssp SEEEEEECTTSCE-----EEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEEC
T ss_pred CceEEEEcCCCcE-----EEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccc
Confidence 4457999999986 3333333468888765554322 2211 12235999996 555555532
Q ss_pred ----------CCeEEEEeCCCCCCC---cceEEE-ec-CCccceEEEEEcCCCcEEEEEe
Q 024185 111 ----------AGAIKLFDSRSYDKG---PFDTFL-VG-GDTAEVCDIKFSNDGKSMLLTT 155 (271)
Q Consensus 111 ----------d~~i~i~d~~~~~~~---~~~~~~-~~-~~~~~v~~~~~s~~~~~l~~~~ 155 (271)
...|..++....... ....+. +. ........|+|.|||++.++.+
T Consensus 103 ~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 103 PKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp TTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred cCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 235666665432110 001111 21 1123468899999998777654
No 334
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=96.82 E-value=0.11 Score=40.17 Aligned_cols=160 Identities=10% Similarity=0.019 Sum_probs=93.0
Q ss_pred CceEEEEEecCcceeEEEecCCcceEEEcCCCCEEEEEecC--------------CeEEEEeCCCCCCCcceEEEecCCc
Q 024185 71 ALEYGIFVLMLASFQGILRLRGRPTVAFDQQGLVFAVAMEA--------------GAIKLFDSRSYDKGPFDTFLVGGDT 136 (271)
Q Consensus 71 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d--------------~~i~i~d~~~~~~~~~~~~~~~~~~ 136 (271)
++.|+..+.+... ...+... .+--+++++++|+.+... ..|+..++...+. .. +..
T Consensus 36 ~~~ly~~~~dg~~-~~~l~~~--~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~----~~-l~~-- 105 (302)
T 3s25_A 36 NGRLYAMNIDGSN-IHKLSND--TAMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGS----TV-LDP-- 105 (302)
T ss_dssp TTEEEEEETTSCS-CEEEEEE--EEEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCC----EE-EEC--
T ss_pred CceEEEEcCCCCC-CEEccCC--ceeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcc----eE-eec--
Confidence 4556656654333 3333322 234567899988887643 3677777776653 22 221
Q ss_pred cceEEEEEcCCCcEEEEEe----cCCeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEecC-CCcEEEEEcCC
Q 024185 137 AEVCDIKFSNDGKSMLLTT----TNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSG-DGTLHAWNINT 211 (271)
Q Consensus 137 ~~v~~~~~s~~~~~l~~~~----~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~iwd~~~ 211 (271)
.. ...|++++++|+... .+..|...++.... ...+..+. + ..++|+++.|+..+. ...|...++..
T Consensus 106 ~~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~-~~~lt~~~----~--~~~~~~g~~iy~t~~g~~~Iy~~~l~g 176 (302)
T 3s25_A 106 DP--CIYASLIGNYIYYLHYDTQTATSLYRIRIDGEE-KKKIKNHY----L--FTCNTSDRYFYYNNPKNGQLYRYDTAS 176 (302)
T ss_dssp SC--EEEEEEETTEEEEEEESSSSCEEEEEEETTSCC-CEEEESSC----C--CCSEEETTEEEEECTTTCCEEEEETTT
T ss_pred CC--ccEEEEeCCEEEEEeecCCCCceEEEEECCCCC-eEEEeCCC----c--eEeeEECCEEEEEeCCCceEEEEECCC
Confidence 11 236788899888776 24456666665333 34443332 2 345788888886665 56888888876
Q ss_pred ceeEEEecCCcceeEEEEEecCCcEEEEeC----CeEEEEcCCCCC
Q 024185 212 RNEVACWNGNIGVVACLKWAPRRAMFVAAS----SVLSFWIPNPSS 253 (271)
Q Consensus 212 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~----~~v~iw~~~~~~ 253 (271)
+.....+.+. .. ..++|++.+|+-.. ..|..-+++...
T Consensus 177 ~~~~~l~~~~---~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~ 218 (302)
T 3s25_A 177 QSEALFYDCN---CY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPN 218 (302)
T ss_dssp TEEEEEECSC---EE-EEEEEETTEEEEEEGGGTTEEEEECSSSCC
T ss_pred CCEEEEeCCC---cc-ceeeecCCEEEEEEcCCCcEEEEEECCCCC
Confidence 6544333321 22 34668888877664 245555665544
No 335
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.79 E-value=0.0019 Score=50.92 Aligned_cols=190 Identities=11% Similarity=-0.011 Sum_probs=99.9
Q ss_pred ceeEEeeecceeeEEEEeeccceeeEEEEEccccc-ceEEeeEE--ec-CCchhhhhhhhhh-ccCceEEEEEecCccee
Q 024185 11 TQALLFARQNIILILLESLCGIYQCMIIEFFATSK-GIRRGLFL--SA-CLQLMIALCLVLL-TTALEYGIFVLMLASFQ 85 (271)
Q Consensus 11 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~--s~-~~~~~~~~~l~s~-~~dg~i~iwd~~~~~~~ 85 (271)
.+.++++..+|.++.++..+|... -.++... .......- .+ ++.. ++.. ..||.+..++.++|...
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~----W~~~~~~~~p~~~~~~~~~~~~~~~-----~vv~p~~dG~l~a~~~~~G~~~ 80 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHII----WSIEPENFQPLIEIQEPSRLETYET-----LIIEPFGDGNIYYFNAHQGLQK 80 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEE----EEECGGGSCCSEECCCSCTTTSSEE-----EEECCSTTTEEEEEETTTEEEE
T ss_pred CCEEEEEeCCCeEEEEECCCCcEE----EEecCCccCCcEEecCCccccCCcE-----EEEEECCCCEEEEEECCCCcEE
Confidence 457788899999999998888322 2233320 11111100 01 2222 2222 68999999999888655
Q ss_pred EEEecCC---cceEEEc-----------CCCCEEEEEecCCeEEEEeCCCCCCCcceEEEecCCc--cc-----eEEEEE
Q 024185 86 GILRLRG---RPTVAFD-----------QQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDT--AE-----VCDIKF 144 (271)
Q Consensus 86 ~~~~~~~---~~~~~~~-----------~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~--~~-----v~~~~~ 144 (271)
..+.... ..-+... ..+..+++|+.+|.+...|+.+++. ...+.... +. ..|...
T Consensus 81 ~~~~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~----~W~~~~~~~~~~~~~~~e~~~~~ 156 (339)
T 2be1_A 81 LPLSIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEI----ISAFGPGSKNGYFGSQSVDCSPE 156 (339)
T ss_dssp EEEEHHHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCE----EEEESTTCBCC------------
T ss_pred eeeccccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcE----EEEEecCCCcccccccccccccc
Confidence 5444321 1112211 1456789999999999999999986 44443211 10 111211
Q ss_pred c-----CCCcEEEEEecCCeEEEEECCCCeEEEEeec-----CCCCCce-eeEEECCCCCEEEEecCCCcEEEEEcCCce
Q 024185 145 S-----NDGKSMLLTTTNNNIYVLDAYGGEKRCGFSL-----EPSPNTN-TEATFTPDGQYVVSGSGDGTLHAWNINTRN 213 (271)
Q Consensus 145 s-----~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~-----~~~~~~v-~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 213 (271)
. ..+..++.+..+..+.+.+ ++|+ +..+.. ......+ ..-..+.|+.+ +.++.||.|.-+|..+|+
T Consensus 157 ~d~~~d~~~~~v~ig~~~y~v~~~~-~sG~-~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~-~~~~~dg~v~A~d~~~G~ 233 (339)
T 2be1_A 157 EKIKLQECENMIVIGKTIFELGIHS-YDGA-SYNVTYSTWQQNVLDVPLALQNTFSKDGMC-IAPFRDKSLLASDLDFRI 233 (339)
T ss_dssp --------CCEEEEEEEEEECEECC-TTSC-CCCCEEEEEECCTTTHHHHTTCSSCSSSCC-EEEETTTEEEEECSTTCC
T ss_pred cccccccCCCeEEEecceEEEEEEC-CCCC-eEEEecccccccccccccccccccccCCcE-EEECCCCEEEEEECCCCc
Confidence 1 1234677777777777766 4453 222211 0000000 00011234555 446778888888887777
Q ss_pred eEE
Q 024185 214 EVA 216 (271)
Q Consensus 214 ~~~ 216 (271)
.+.
T Consensus 234 ~~W 236 (339)
T 2be1_A 234 ARW 236 (339)
T ss_dssp EEE
T ss_pred EEE
Confidence 665
No 336
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.72 E-value=0.061 Score=50.24 Aligned_cols=180 Identities=7% Similarity=0.008 Sum_probs=102.2
Q ss_pred CceEEEEEecC-cceeEEEecCC------cceEEEcCCCCEEEEEe-------cCCeEEEEeCCCCCCCcceEEEecCCc
Q 024185 71 ALEYGIFVLML-ASFQGILRLRG------RPTVAFDQQGLVFAVAM-------EAGAIKLFDSRSYDKGPFDTFLVGGDT 136 (271)
Q Consensus 71 dg~i~iwd~~~-~~~~~~~~~~~------~~~~~~~~~~~~l~~~~-------~d~~i~i~d~~~~~~~~~~~~~~~~~~ 136 (271)
+..|+-|+++. ..+++.+..|. +-....+++.++++..+ -.|.+.+|..+.+. ...+.||.
T Consensus 124 ~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~-----sQ~iegha 198 (1630)
T 1xi4_A 124 DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-----SQPIEGHA 198 (1630)
T ss_pred CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccccc-----chhhhHhH
Confidence 44699999964 34555554442 22245577788776442 34788999987655 34456776
Q ss_pred cceEEEEEcC---CCcEEEEEec---CCeEEEEECCCC---eEE------EE-eecCCCCCceeeEEECCCCCEEEEecC
Q 024185 137 AEVCDIKFSN---DGKSMLLTTT---NNNIYVLDAYGG---EKR------CG-FSLEPSPNTNTEATFTPDGQYVVSGSG 200 (271)
Q Consensus 137 ~~v~~~~~s~---~~~~l~~~~~---d~~i~~~d~~~~---~~~------~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~ 200 (271)
+....+.... ..+.+..+.. .+.+++-++... ... .. +..........++..++.-..+..-+.
T Consensus 199 ~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk 278 (1630)
T 1xi4_A 199 ASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITK 278 (1630)
T ss_pred hhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEec
Confidence 6665554432 1233333332 368888888542 111 00 111111123445677777778888888
Q ss_pred CCcEEEEEcCCceeEEEecCCcceeEEEEEec-CCcEEEEeC-CeEEEEcCCCCCCC
Q 024185 201 DGTLHAWNINTRNEVACWNGNIGVVACLKWAP-RRAMFVAAS-SVLSFWIPNPSSNS 255 (271)
Q Consensus 201 dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~-~~v~iw~~~~~~~~ 255 (271)
-|.++++|+.++.++..-+-...+|...+-+. .+-.+...- |.|.--.++...+.
T Consensus 279 ~G~~~~~d~~t~~~i~~~ris~~~iF~~~~~~~~~g~~~vnr~G~vl~v~v~~~~iv 335 (1630)
T 1xi4_A 279 YGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENII 335 (1630)
T ss_pred CceEEEEecccchhhhhccccCCceEEeccCCCCCceEEEcCCceEEEEEEccchhh
Confidence 99999999999998875544444454444333 233443333 65555555544443
No 337
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=96.51 E-value=0.39 Score=42.31 Aligned_cols=193 Identities=12% Similarity=0.015 Sum_probs=112.3
Q ss_pred cceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEe--cCCcceEEEcCCCCEEEEEecCCeEEEEeCCCC
Q 024185 45 KGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILR--LRGRPTVAFDQQGLVFAVAMEAGAIKLFDSRSY 122 (271)
Q Consensus 45 ~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~ 122 (271)
...|.++....++.. ..++.+| +..||..+.+...... ...+.++.. .++ .|..++.+ .+..||..+.
T Consensus 62 ~~~i~~i~~d~~g~l------WigT~~G-l~~yd~~~~~f~~~~~~~~~~i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~ 131 (758)
T 3ott_A 62 NTRIYCGVIIDNTYL------YMGTDNG-ILVYNYRADRYEQPETDFPTDVRTMAL-QGD-TLWLGALN-GLYTYQLQSR 131 (758)
T ss_dssp SSCEEEEEEETTTEE------EEEETTE-EEEEETTTTEECCCSCCCCSCEEEEEE-ETT-EEEEEETT-EEEEEETTTC
T ss_pred CceEEEEEEcCCCcE------EEEeCCC-eEEEeCCCCEEECcccCCCceEEEEEe-cCC-cEEEEcCC-cceeEeCCCC
Confidence 345777777777764 3445555 7789987764322111 112333433 344 46666655 6888998765
Q ss_pred CCCcceEEEe---cCCccceEEEEEcCCCcEEEEEecCCeEEEEECCCCeEEEEeecCC----CCCceeeEEECCCCCEE
Q 024185 123 DKGPFDTFLV---GGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEP----SPNTNTEATFTPDGQYV 195 (271)
Q Consensus 123 ~~~~~~~~~~---~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l 195 (271)
+. ..... .-....|.++...++|... .++.+ -+..+|..+++... +.... ....|.++...+++..|
T Consensus 132 ~~---~~~~~~~~~l~~~~i~~i~~d~~g~lW-igt~~-Gl~~~~~~~~~~~~-~~~~~~~~~~~~~i~~i~~d~~~~~l 205 (758)
T 3ott_A 132 KL---TSFDTRRNGLPNNTIYSIIRTKDNQIY-VGTYN-GLCRYIPSNGKFEG-IPLPVHSSQSNLFVNSLLEDTTRQCV 205 (758)
T ss_dssp CE---EEECHHHHCCSCSCEEEEEECTTCCEE-EEETT-EEEEEETTTTEEEE-ECCCCCTTCSSCCEEEEEEETTTTEE
T ss_pred eE---EEeccCCCCcCCCeEEEEEEcCCCCEE-EEeCC-CHhhCccCCCceEE-ecCCCccccccceeEEEEEECCCCEE
Confidence 52 11100 0113468888888777744 45554 57888877765432 22111 11237778777776644
Q ss_pred EEecCCCcEEEEEcCCceeEEEecCCcceeEEEEEecCCcEEEEeCCeEEEEcCCCCCC
Q 024185 196 VSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAASSVLSFWIPNPSSN 254 (271)
Q Consensus 196 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~v~iw~~~~~~~ 254 (271)
-.|+. +-+..+|..+++...........|.++...++|.+.+...+-+.+++..+++.
T Consensus 206 Wigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~~Gl~~~~~~~~~~ 263 (758)
T 3ott_A 206 WIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLAGTDNGLYVYHNDTTPL 263 (758)
T ss_dssp EEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEEEETTEEEEECCTTSCC
T ss_pred EEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEEEeCCceeEEecCCCcE
Confidence 44554 35888898776543221112345888888888887766566688888877654
No 338
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=96.50 E-value=0.23 Score=39.46 Aligned_cols=216 Identities=13% Similarity=0.121 Sum_probs=112.8
Q ss_pred eeEEeeecceeeEEEEeeccceeeEEEEE---cccccceEEeeEEecC---Cchhhhhhhhhhc---cC----ceEEEEE
Q 024185 12 QALLFARQNIILILLESLCGIYQCMIIEF---FATSKGIRRGLFLSAC---LQLMIALCLVLLT---TA----LEYGIFV 78 (271)
Q Consensus 12 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~v~~~~~s~~---~~~~~~~~l~s~~---~d----g~i~iwd 78 (271)
..++++...+.+..++ ..+. ..+.. +.........++++|+ +..+ .++-+ .+ ..|..|+
T Consensus 40 G~l~V~e~~g~I~~~d-~~G~---~~~~~~~v~~~g~~g~~gia~~pdf~~~g~l----yv~~~~~~~~~~~~~~v~r~~ 111 (354)
T 3a9g_A 40 GRYLVTERPGRLVLIS-PSGK---KLVASFDVANVGEAGLLGLALHPEFPKKSWV----YLYASYFAEGGHIRNRVIRGR 111 (354)
T ss_dssp TEEEEEETTTEEEEEC-SSCE---EEEEECCCCCSTTCSEEEEEECTTTTTSCEE----EEEEEEECGGGCEEEEEEEEE
T ss_pred CeEEEEeCCCEEEEEe-CCCc---eEeeccceeecCCCceeeEEeCCCCCcCCEE----EEEEeccCCCCCcceEEEEEE
Confidence 4566666667777775 2332 11111 1222345678999997 3332 22222 13 5677777
Q ss_pred ecCc--c---e--e-EEEe---cCCcceEEEcCCCCEEEEEec-------------CCeEEEEeCCCCCC--Cc---ceE
Q 024185 79 LMLA--S---F--Q-GILR---LRGRPTVAFDQQGLVFAVAME-------------AGAIKLFDSRSYDK--GP---FDT 129 (271)
Q Consensus 79 ~~~~--~---~--~-~~~~---~~~~~~~~~~~~~~~l~~~~~-------------d~~i~i~d~~~~~~--~~---~~~ 129 (271)
.... . . + ..+. .|....++|.|||.+.++.+. .|.|..++....-. .+ ...
T Consensus 112 ~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~~~i 191 (354)
T 3a9g_A 112 LDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFPNSPI 191 (354)
T ss_dssp ECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSSTTCCE
T ss_pred ECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCCCCcE
Confidence 7544 1 1 1 1122 234455999999986555332 24566666543200 00 012
Q ss_pred EEecCCccceEEEEEcC-CCcEEEEEecCC---eEEEEECCCCe------------------EEEEeecCCCCCceeeEE
Q 024185 130 FLVGGDTAEVCDIKFSN-DGKSMLLTTTNN---NIYVLDAYGGE------------------KRCGFSLEPSPNTNTEAT 187 (271)
Q Consensus 130 ~~~~~~~~~v~~~~~s~-~~~~l~~~~~d~---~i~~~d~~~~~------------------~~~~~~~~~~~~~v~~~~ 187 (271)
+. .++. ....++|+| +++++++-.... .|.+.. .+. ++..+. ........+.
T Consensus 192 ~a-~G~r-np~Gla~d~~~g~l~v~d~g~~~~dei~~i~--~G~nyGwp~~~g~~~~~~~~~p~~~~~--~~~~ap~G~~ 265 (354)
T 3a9g_A 192 WS-YGHR-NPQGIDWHRASGVMVATEHGPVGHDEVNIIL--KGGNYGWPLATGKAGRGEFVDPVIDTG--SETWAPSGAS 265 (354)
T ss_dssp EE-ECCS-CCCEEEECTTTCCEEEEECCSSSCCEEEEEC--TTCBCCTTTCCSCCCCTTSCCCSEECT--TCCCCEEEEE
T ss_pred EE-EccC-CcceEEEeCCCCCEEEEecCCCCCcEEEEec--CCCcCCCCcccCCCCCCCCcCCEeecC--CCCcCCcceE
Confidence 22 2333 345789999 566444332211 233322 121 111110 1112366677
Q ss_pred EC-------CCCCEEEEecCCCcEEEEEcCCc-eeE--EEe-cCCcceeEEEEEecCCcEEEEeC
Q 024185 188 FT-------PDGQYVVSGSGDGTLHAWNINTR-NEV--ACW-NGNIGVVACLKWAPRRAMFVAAS 241 (271)
Q Consensus 188 ~~-------~~~~~l~~~~~dg~i~iwd~~~~-~~~--~~~-~~~~~~v~~~~~s~~~~~l~~~~ 241 (271)
|. .+|+++++....+.|...++... +.. ..+ .+....+..+++.|||.+.++..
T Consensus 266 ~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 266 FVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp ECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred EECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence 73 46777777666788988888753 322 233 22245688999999998777653
No 339
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=96.33 E-value=0.45 Score=41.58 Aligned_cols=179 Identities=9% Similarity=0.025 Sum_probs=95.5
Q ss_pred ceEEEEEecCcceeEEE-e-----cCC---cceEEEcC-CCCEEEEEecC------CeEEEEeCCCCCCCcceEEEecCC
Q 024185 72 LEYGIFVLMLASFQGIL-R-----LRG---RPTVAFDQ-QGLVFAVAMEA------GAIKLFDSRSYDKGPFDTFLVGGD 135 (271)
Q Consensus 72 g~i~iwd~~~~~~~~~~-~-----~~~---~~~~~~~~-~~~~l~~~~~d------~~i~i~d~~~~~~~~~~~~~~~~~ 135 (271)
..+.+||..+++....- . ... ..+++..+ +++.++.|+.+ ..+.+||..+.+... ...+...
T Consensus 412 ~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~--~~~~p~~ 489 (695)
T 2zwa_A 412 NEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSM--IKSLSHT 489 (695)
T ss_dssp CCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEE--CCCCSBC
T ss_pred CcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEE--CCCCCCC
Confidence 46788898877644332 2 111 12233333 77777777643 358889988765311 1111111
Q ss_pred ccceEEEEEcCCCcEEEEEecCC--eEEEEECCCCeEEEEee---cCCCCCceeeEEECCC-CCEEEEecC--C-----C
Q 024185 136 TAEVCDIKFSNDGKSMLLTTTNN--NIYVLDAYGGEKRCGFS---LEPSPNTNTEATFTPD-GQYVVSGSG--D-----G 202 (271)
Q Consensus 136 ~~~v~~~~~s~~~~~l~~~~~d~--~i~~~d~~~~~~~~~~~---~~~~~~~v~~~~~~~~-~~~l~~~~~--d-----g 202 (271)
.. -.+.+...+++.++.|+.++ .+.+||..+.+-...-. ..........+.+..+ ++.++.|+. + +
T Consensus 490 R~-~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~ 568 (695)
T 2zwa_A 490 RF-RHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSD 568 (695)
T ss_dssp CB-SCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCC
T ss_pred cc-cceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeC
Confidence 11 12233324788888887654 69999998876433211 1111111223555555 677777776 2 3
Q ss_pred cEEEEEcCCce------e--EEEecCCcceeEEEEEecCCcEEEEeC----------CeEEEEcCCCCC
Q 024185 203 TLHAWNINTRN------E--VACWNGNIGVVACLKWAPRRAMFVAAS----------SVLSFWIPNPSS 253 (271)
Q Consensus 203 ~i~iwd~~~~~------~--~~~~~~~~~~v~~~~~s~~~~~l~~~~----------~~v~iw~~~~~~ 253 (271)
.+.+||+.+.+ - +.........-.++....++++++.|+ ..+.+||+.+.+
T Consensus 569 ~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~ 637 (695)
T 2zwa_A 569 KAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSET 637 (695)
T ss_dssp EEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTTE
T ss_pred cEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCCe
Confidence 58899998776 1 111111111112333344477777765 238899988764
No 340
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=96.22 E-value=0.2 Score=43.77 Aligned_cols=168 Identities=7% Similarity=0.001 Sum_probs=85.3
Q ss_pred eEEEEEecCcceeEEE--ecCCc-ceEEEcCCCCEEEEEecCC--eEEEEeCCCCCCCcceEE-EecCCccceEEEEEcC
Q 024185 73 EYGIFVLMLASFQGIL--RLRGR-PTVAFDQQGLVFAVAMEAG--AIKLFDSRSYDKGPFDTF-LVGGDTAEVCDIKFSN 146 (271)
Q Consensus 73 ~i~iwd~~~~~~~~~~--~~~~~-~~~~~~~~~~~l~~~~~d~--~i~i~d~~~~~~~~~~~~-~~~~~~~~v~~~~~s~ 146 (271)
.+.+||..+.+....- ..... .+.+...+++.++.|+.++ .+.+||..+.+....... ..........++.+..
T Consensus 469 dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~ 548 (695)
T 2zwa_A 469 DNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDP 548 (695)
T ss_dssp CCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEET
T ss_pred cEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeC
Confidence 5778888776533221 11111 2233334788888887654 799999987653111000 0111112223355565
Q ss_pred C-CcEEEEEec--C-----CeEEEEECCCCeE-----EEEeecC-CCCCceeeEEECCCCCEEEEecC--------CCcE
Q 024185 147 D-GKSMLLTTT--N-----NNIYVLDAYGGEK-----RCGFSLE-PSPNTNTEATFTPDGQYVVSGSG--------DGTL 204 (271)
Q Consensus 147 ~-~~~l~~~~~--d-----~~i~~~d~~~~~~-----~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~--------dg~i 204 (271)
+ ++.++.|+. + ..+..||+.+.+. -..+... ..+..-.++....+++.++.|+. ...+
T Consensus 549 ~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v 628 (695)
T 2zwa_A 549 VSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSI 628 (695)
T ss_dssp TTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSE
T ss_pred CCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeE
Confidence 5 677777765 2 4689999987761 1112111 11111112333334777777774 3469
Q ss_pred EEEEcCCceeEEEecCCcce---------eEEEEEecCCcEEEEeC
Q 024185 205 HAWNINTRNEVACWNGNIGV---------VACLKWAPRRAMFVAAS 241 (271)
Q Consensus 205 ~iwd~~~~~~~~~~~~~~~~---------v~~~~~s~~~~~l~~~~ 241 (271)
.+||+.+.+-. ........ -.+....+++++++.|+
T Consensus 629 ~~yd~~t~~W~-~~~~p~~~~~~~~p~~~gh~~~~~~~g~i~v~GG 673 (695)
T 2zwa_A 629 ISLDPLSETLT-SIPISRRIWEDHSLMLAGFSLVSTSMGTIHIIGG 673 (695)
T ss_dssp EEEETTTTEEE-ECCCCHHHHHHSCCCCSSCEEECC---CEEEECC
T ss_pred EEEECCCCeEE-EeeccccccCCCCccceeeeEEEeCCCEEEEEeC
Confidence 99999877654 22111100 02334445667777776
No 341
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.04 E-value=0.18 Score=39.89 Aligned_cols=134 Identities=7% Similarity=0.009 Sum_probs=67.1
Q ss_pred cCceEEEEEecC--cceeE--EEe-cCCc-ceEEEcCCCCEEEEEec-C---------CeEEEEeCCCCCCCcceEEEec
Q 024185 70 TALEYGIFVLML--ASFQG--ILR-LRGR-PTVAFDQQGLVFAVAME-A---------GAIKLFDSRSYDKGPFDTFLVG 133 (271)
Q Consensus 70 ~dg~i~iwd~~~--~~~~~--~~~-~~~~-~~~~~~~~~~~l~~~~~-d---------~~i~i~d~~~~~~~~~~~~~~~ 133 (271)
....+..+|..+ .+... .+. .... .+++. -+++.++.|+. + ..+.+||..+.+..... .+.
T Consensus 29 ~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~--~~~ 105 (357)
T 2uvk_A 29 AGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAF-IDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLM--SHA 105 (357)
T ss_dssp GTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEE-ETTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECS--CCC
T ss_pred CCCeEEEEccccCCCCeeECCCCCCCcCccceEEE-ECCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECC--CCC
Confidence 345688888864 32221 112 1111 11222 25666666665 2 46899999876531111 111
Q ss_pred -CCccceEEEEEcCCCcEEEEEecC---------------------------------------CeEEEEECCCCeEEEE
Q 024185 134 -GDTAEVCDIKFSNDGKSMLLTTTN---------------------------------------NNIYVLDAYGGEKRCG 173 (271)
Q Consensus 134 -~~~~~v~~~~~s~~~~~l~~~~~d---------------------------------------~~i~~~d~~~~~~~~~ 173 (271)
.......++. .+++.++.|+.+ ..+.+||..+.+-...
T Consensus 106 p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 183 (357)
T 2uvk_A 106 PMGMAGHVTFV--HNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYA 183 (357)
T ss_dssp SSCCSSEEEEE--ETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEE
T ss_pred CcccccceEEE--ECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEEC
Confidence 1111122222 567778888754 5799999988764433
Q ss_pred eecCCCCCceeeEEECCCCCEEEEecC------CCcEEEEEc
Q 024185 174 FSLEPSPNTNTEATFTPDGQYVVSGSG------DGTLHAWNI 209 (271)
Q Consensus 174 ~~~~~~~~~v~~~~~~~~~~~l~~~~~------dg~i~iwd~ 209 (271)
-........-.+++. -++++++.|+. ...+..||+
T Consensus 184 ~~~p~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~~d~ 224 (357)
T 2uvk_A 184 GESPWYGTAGAAVVN-KGDKTWLINGEAKPGLRTDAVFELDF 224 (357)
T ss_dssp EECSSCCCBSCEEEE-ETTEEEEECCEEETTEECCCEEEEEC
T ss_pred CCCCCCCcccccEEE-ECCEEEEEeeecCCCcccCceEEEEe
Confidence 221111111022222 25667777764 235777876
No 342
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=95.85 E-value=0.067 Score=44.84 Aligned_cols=102 Identities=15% Similarity=0.050 Sum_probs=67.5
Q ss_pred cceEEEEEcCCCcEEEEEec-CCeEEEEECCC------CeE-------EEEeecCCCCCceeeEEECCCCCEEEEecCCC
Q 024185 137 AEVCDIKFSNDGKSMLLTTT-NNNIYVLDAYG------GEK-------RCGFSLEPSPNTNTEATFTPDGQYVVSGSGDG 202 (271)
Q Consensus 137 ~~v~~~~~s~~~~~l~~~~~-d~~i~~~d~~~------~~~-------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 202 (271)
.....+..+|||++++.++. +.++.++|.+. ++. ....... ......+|+++|+-..+-..|.
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~G---lGPlHt~Fd~~G~aYTtlfidS 399 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELG---LGPLHTTFDGRGNAYTTLFIDS 399 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCC---SCEEEEEECSSSEEEEEETTTT
T ss_pred CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCC---CcccEEEECCCCceEeeeeecc
Confidence 34567889999999988876 88999999873 111 1122211 2366789999995555666799
Q ss_pred cEEEEEcCCc----------eeEEEecCCcceeEEE-----EEecCCcEEEEeC
Q 024185 203 TLHAWNINTR----------NEVACWNGNIGVVACL-----KWAPRRAMFVAAS 241 (271)
Q Consensus 203 ~i~iwd~~~~----------~~~~~~~~~~~~v~~~-----~~s~~~~~l~~~~ 241 (271)
.|.-|++... ..+..+.-|-.+-... .-.|||++|++..
T Consensus 400 qvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~ln 453 (638)
T 3sbq_A 400 QVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALS 453 (638)
T ss_dssp EEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEE
T ss_pred eEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEec
Confidence 9999998753 4566666554432211 1256788888774
No 343
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=95.09 E-value=0.43 Score=40.17 Aligned_cols=101 Identities=12% Similarity=0.110 Sum_probs=65.2
Q ss_pred EEEcCCCCEEEEEec-CCeEEEEeCCCC------CC-CcceEE--EecCCccceEEEEEcCCCcEEEEEecCCeEEEEEC
Q 024185 96 VAFDQQGLVFAVAME-AGAIKLFDSRSY------DK-GPFDTF--LVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDA 165 (271)
Q Consensus 96 ~~~~~~~~~l~~~~~-d~~i~i~d~~~~------~~-~~~~~~--~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~ 165 (271)
+..+|||+++++++. +.++.++|.+.. +. .+.... ... -.-.....+|.++|.-..+.--|..|.-|++
T Consensus 328 v~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G~aYTtlfidSqvvkWni 406 (638)
T 3sbq_A 328 CNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRGNAYTTLFIDSQVVKWNM 406 (638)
T ss_dssp EEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSSEEEEEETTTTEEEEEEH
T ss_pred eeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCCceEeeeeecceEEEEec
Confidence 889999999888754 678999998741 11 111111 111 1234677899999954445556999999998
Q ss_pred CCC----------eEEEEeecCCCCCceeeEEE------CCCCCEEEEecC
Q 024185 166 YGG----------EKRCGFSLEPSPNTNTEATF------TPDGQYVVSGSG 200 (271)
Q Consensus 166 ~~~----------~~~~~~~~~~~~~~v~~~~~------~~~~~~l~~~~~ 200 (271)
... ..+.++..|..+ -.+.- .|||++|++...
T Consensus 407 ~~a~~~~~g~~~~~v~~k~dv~Yqp---GH~~~~~get~~~dGk~lv~lnK 454 (638)
T 3sbq_A 407 EEAVRAYKGEKVNYIKQKLDVHYQP---GHLHASLCETNEADGKWLVALSK 454 (638)
T ss_dssp HHHHHHHTTCCCCCEEEEEECSSCE---EEEEETTTTSTTCCSCEEEEEES
T ss_pred cHHHHHhcCccCCeeeeccccccCC---cccccCCCccCCCCccEEEEecc
Confidence 642 455666666553 22322 588999998743
No 344
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=95.09 E-value=0.42 Score=44.96 Aligned_cols=197 Identities=8% Similarity=0.066 Sum_probs=110.3
Q ss_pred eEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEecCC-cceEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcceE
Q 024185 51 LFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILRLRG-RPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDT 129 (271)
Q Consensus 51 ~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 129 (271)
...+|..+.++. -...++.|||+++...++.+...+ +..-.|-.+ +.|+..+ +..|+-|++.... .|...
T Consensus 71 AIMnP~~~iiAL------rag~~lQiFnl~~k~klks~~~~e~VvfWkWis~-~~l~lVT-~~aVyHW~~~~~s-~P~k~ 141 (1630)
T 1xi4_A 71 AIMNPASKVIAL------KAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISL-NTVALVT-DNAVYHWSMEGES-QPVKM 141 (1630)
T ss_pred hccCCCcceEEE------ecCCeEEEeehHHhhhhcccccCCCceEEEecCC-CeeEEEc-CCeEEEeccCCCC-ccHHH
Confidence 445777765322 236889999999988877776654 333556433 3455555 4689999997533 33333
Q ss_pred EEecC--CccceEEEEEcCCCcEEEEEe-------cCCeEEEEECCCCeEEEEeecCCCCCceeeEEEC---CCCCEEEE
Q 024185 130 FLVGG--DTAEVCDIKFSNDGKSMLLTT-------TNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFT---PDGQYVVS 197 (271)
Q Consensus 130 ~~~~~--~~~~v~~~~~s~~~~~l~~~~-------~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~---~~~~~l~~ 197 (271)
+...+ ....|..-.-+++.++++..+ -.|.+.+|..+.+. .+.+.+|... ...+... +..+.+..
T Consensus 142 fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~-sQ~iegha~~--F~~~~~~~~~~~~~l~~f 218 (1630)
T 1xi4_A 142 FDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAAS--FAQFKMEGNAEESTLFCF 218 (1630)
T ss_pred HhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccccc-chhhhHhHhh--hheeccCCCCCCceEEEE
Confidence 32111 035677778889999887544 25889999876442 2334444332 1111111 11222222
Q ss_pred ecC---CCcEEEEEcCCc---eeEE------E-ecC--CcceeEEEEEecCCcEEEEe--CCeEEEEcCCCCCCCcCCC
Q 024185 198 GSG---DGTLHAWNINTR---NEVA------C-WNG--NIGVVACLKWAPRRAMFVAA--SSVLSFWIPNPSSNSTDES 259 (271)
Q Consensus 198 ~~~---dg~i~iwd~~~~---~~~~------~-~~~--~~~~v~~~~~s~~~~~l~~~--~~~v~iw~~~~~~~~~~~~ 259 (271)
+.. .+.++|-++... .... . ++. -..-..++..++....+..- .|-+.+||++++.++-...
T Consensus 219 ~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~r 297 (1630)
T 1xi4_A 219 AVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNR 297 (1630)
T ss_pred EEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchhhhhcc
Confidence 211 368888887542 1111 1 111 11223466677755444333 3999999999998765443
No 345
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=94.88 E-value=1.3 Score=36.59 Aligned_cols=109 Identities=16% Similarity=0.160 Sum_probs=61.5
Q ss_pred CcceEEEcCCCC-EEEEEecCCeEEEEeCCCCC-CCcceEEE--ec-----CCccceEEEEEcCC----CcEEEEEec--
Q 024185 92 GRPTVAFDQQGL-VFAVAMEAGAIKLFDSRSYD-KGPFDTFL--VG-----GDTAEVCDIKFSND----GKSMLLTTT-- 156 (271)
Q Consensus 92 ~~~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~-~~~~~~~~--~~-----~~~~~v~~~~~s~~----~~~l~~~~~-- 156 (271)
....++|.||+. .++++...|.|++++..... ..++.... +. ........|+++|+ +.+.++-+.
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~ 94 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQ 94 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECC
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCC
Confidence 446699999996 56677788999999754321 11111110 11 11456889999996 443333222
Q ss_pred C----------CeEEEEECCC----------CeEEEEeecCCCCCceeeEEECCCCCEEEEecC
Q 024185 157 N----------NNIYVLDAYG----------GEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSG 200 (271)
Q Consensus 157 d----------~~i~~~d~~~----------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 200 (271)
+ ..|.-|.+.. .+.+..+........-..+.|.|||.+.++.+.
T Consensus 95 ~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd 158 (463)
T 2wg3_C 95 ERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGD 158 (463)
T ss_dssp CSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECC
T ss_pred CCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCC
Confidence 1 1444465532 123333332222233677999999987776554
No 346
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=94.79 E-value=1.2 Score=35.26 Aligned_cols=67 Identities=9% Similarity=0.059 Sum_probs=43.0
Q ss_pred eeeEEECC-------CCCEEEEecCCCcEEEEEcCCceeEEE--e-cCCcceeEEEEEecCCcEEEEeC-CeEEEEcC
Q 024185 183 NTEATFTP-------DGQYVVSGSGDGTLHAWNINTRNEVAC--W-NGNIGVVACLKWAPRRAMFVAAS-SVLSFWIP 249 (271)
Q Consensus 183 v~~~~~~~-------~~~~l~~~~~dg~i~iwd~~~~~~~~~--~-~~~~~~v~~~~~s~~~~~l~~~~-~~v~iw~~ 249 (271)
...+.|.+ +|+++++....+.|...++..++.... + ......+..+++.|||.++++.. ..=+||.+
T Consensus 273 p~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~td~~~g~I~ri 350 (353)
T 2g8s_A 273 VSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLYVLTDESSGELLKV 350 (353)
T ss_dssp EEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSCEEEEECSTTEEEEEE
T ss_pred cceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCcEEEEEeCCCCEEEEE
Confidence 45566653 466777666678888888876554332 2 22234689999999999777644 33455543
No 347
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=93.80 E-value=2.1 Score=35.35 Aligned_cols=103 Identities=12% Similarity=0.184 Sum_probs=59.8
Q ss_pred cceEEEEEcCCCc-EEEEEecCCeEEEEECCCCe---EEEEeec--CC-----CCCceeeEEECCC----CCEEEEecC-
Q 024185 137 AEVCDIKFSNDGK-SMLLTTTNNNIYVLDAYGGE---KRCGFSL--EP-----SPNTNTEATFTPD----GQYVVSGSG- 200 (271)
Q Consensus 137 ~~v~~~~~s~~~~-~l~~~~~d~~i~~~d~~~~~---~~~~~~~--~~-----~~~~v~~~~~~~~----~~~l~~~~~- 200 (271)
.....|+|.|||. .++++...|.|++++..... .+..+.. .. .......++|+|+ +.+.++-+.
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 4567899999996 56777889999999753221 1121110 10 1234788999997 443333221
Q ss_pred -C----------CcEEEEEcCC----------ceeEEEec----CCcceeEEEEEecCCcEEEEeC
Q 024185 201 -D----------GTLHAWNINT----------RNEVACWN----GNIGVVACLKWAPRRAMFVAAS 241 (271)
Q Consensus 201 -d----------g~i~iwd~~~----------~~~~~~~~----~~~~~v~~~~~s~~~~~l~~~~ 241 (271)
+ ..|.-|.+.. .+.+..+. .|. -..|.|.|||.+.++.+
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~--g~~l~fgpDG~LYv~~G 157 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHL--GGQLLFGPDGFLYIILG 157 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSC--EEEEEECTTSCEEEEEC
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCccc--CCcEeECCCCcEEEEeC
Confidence 1 1344465532 12333332 343 47899999998766654
No 348
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=93.79 E-value=2.3 Score=34.74 Aligned_cols=163 Identities=10% Similarity=0.067 Sum_probs=99.2
Q ss_pred ceEEeeEEecCCchhhhhhhh--hhccCceEEEEEecCcceeEEEecCCcceEEEcCCC-----CEEEEEecC---CeEE
Q 024185 46 GIRRGLFLSACLQLMIALCLV--LLTTALEYGIFVLMLASFQGILRLRGRPTVAFDQQG-----LVFAVAMEA---GAIK 115 (271)
Q Consensus 46 ~~v~~~~~s~~~~~~~~~~l~--s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-----~~l~~~~~d---~~i~ 115 (271)
..+..-..+++.++++..-+. .+.-.|.+.+|..+.+. -+.+++|......+-.+| ..++.+... +.++
T Consensus 151 ~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~-sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLh 229 (494)
T 1bpo_A 151 CQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLH 229 (494)
T ss_dssp CEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCC-EEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEE
T ss_pred ceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccc-cchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEE
Confidence 355556678888874331110 12235788899886544 567778866555554443 245555432 7899
Q ss_pred EEeCCCC--CCCcceEEEec------CCccceEEEEEcCCCcEEEEEecCCeEEEEECCCCeEEEEeecCCCCCceeeEE
Q 024185 116 LFDSRSY--DKGPFDTFLVG------GDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEAT 187 (271)
Q Consensus 116 i~d~~~~--~~~~~~~~~~~------~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~ 187 (271)
+-++... ...++...... ...+-.-++..|+....++.-+.-|.+++||+.++.++..-.....+ |...+
T Consensus 230 i~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~~~--iF~t~ 307 (494)
T 1bpo_A 230 IIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGET--IFVTA 307 (494)
T ss_dssp EEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSC--EEEEE
T ss_pred EEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccceeeeeecccCCc--eEEec
Confidence 9998543 11122221111 12344567888888888889999999999999999998876655554 44344
Q ss_pred ECCCCCEEEEecCCCcEEEEEcCC
Q 024185 188 FTPDGQYVVSGSGDGTLHAWNINT 211 (271)
Q Consensus 188 ~~~~~~~l~~~~~dg~i~iwd~~~ 211 (271)
.+....-++.....|.|.--.+..
T Consensus 308 ~~~~~~Gi~~Vnr~GqVl~v~v~e 331 (494)
T 1bpo_A 308 PHEATAGIIGVNRKGQVLSVCVEE 331 (494)
T ss_dssp EETTTTEEEEEETTCEEEEEEECT
T ss_pred ccCCCCcEEEEccCceEEEEEEcc
Confidence 444444455555666665555544
No 349
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=93.48 E-value=3.7 Score=36.10 Aligned_cols=212 Identities=8% Similarity=0.016 Sum_probs=113.8
Q ss_pred eeEEeeecceeeEEEEeeccceeeEEEEEcccccceEEeeEEecCCchhhhhhhhhhccCceEEEEEecCcceeEEEe--
Q 024185 12 QALLFARQNIILILLESLCGIYQCMIIEFFATSKGIRRGLFLSACLQLMIALCLVLLTTALEYGIFVLMLASFQGILR-- 89 (271)
Q Consensus 12 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-- 89 (271)
..|.+++.+| +..++........ ........+.++.. .++.. ..++.+ -+..+|.++++.. .+.
T Consensus 74 g~lWigT~~G-l~~yd~~~~~f~~----~~~~~~~~i~~i~~-~~g~l------Wigt~~-Gl~~~~~~~~~~~-~~~~~ 139 (758)
T 3ott_A 74 TYLYMGTDNG-ILVYNYRADRYEQ----PETDFPTDVRTMAL-QGDTL------WLGALN-GLYTYQLQSRKLT-SFDTR 139 (758)
T ss_dssp TEEEEEETTE-EEEEETTTTEECC----CSCCCCSCEEEEEE-ETTEE------EEEETT-EEEEEETTTCCEE-EECHH
T ss_pred CcEEEEeCCC-eEEEeCCCCEEEC----cccCCCceEEEEEe-cCCcE------EEEcCC-cceeEeCCCCeEE-EeccC
Confidence 4556666443 5566654442111 01111234555543 35543 234444 5778888765543 231
Q ss_pred -----cCCcceEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcceEEEecC----CccceEEEEEcCCCcEEEEEecCCeE
Q 024185 90 -----LRGRPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGG----DTAEVCDIKFSNDGKSMLLTTTNNNI 160 (271)
Q Consensus 90 -----~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~----~~~~v~~~~~s~~~~~l~~~~~d~~i 160 (271)
...+.++....++... .++.+ -+..++..+.+. ....... ....|.++...+++..|..|+. +-+
T Consensus 140 ~~~l~~~~i~~i~~d~~g~lW-igt~~-Gl~~~~~~~~~~---~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl 213 (758)
T 3ott_A 140 RNGLPNNTIYSIIRTKDNQIY-VGTYN-GLCRYIPSNGKF---EGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYL 213 (758)
T ss_dssp HHCCSCSCEEEEEECTTCCEE-EEETT-EEEEEETTTTEE---EEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEE
T ss_pred CCCcCCCeEEEEEEcCCCCEE-EEeCC-CHhhCccCCCce---EEecCCCccccccceeEEEEEECCCCEEEEEEC-CCC
Confidence 1224446666666644 45544 577888766542 1111111 1234888888877776666664 468
Q ss_pred EEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCCceeEEEec-------CCcceeEEEEEecC
Q 024185 161 YVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWN-------GNIGVVACLKWAPR 233 (271)
Q Consensus 161 ~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-------~~~~~v~~~~~s~~ 233 (271)
..+|..+++......... ..|.++...++|.+.+.. .+ -+.+++..+++...... -....|.++....+
T Consensus 214 ~~~~~~~~~~~~~~~l~~--~~i~~i~~d~~g~lWigT-~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~ 289 (758)
T 3ott_A 214 FQYFPSTGQIKQTEAFHN--NSIKSLALDGNGDLLAGT-DN-GLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQE 289 (758)
T ss_dssp EEEETTTTEEEEEEEEEE--EEEEEEEECTTCCEEEEE-TT-EEEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTT
T ss_pred eEEcCCCCeEEeccCCCC--CeEEEEEEcCCCCEEEEe-CC-ceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCC
Confidence 889987765432211111 237788888888765543 44 47888877654432211 01235888888888
Q ss_pred CcEEEEeCCeEEEE
Q 024185 234 RAMFVAASSVLSFW 247 (271)
Q Consensus 234 ~~~l~~~~~~v~iw 247 (271)
|.+.+...+-+.++
T Consensus 290 g~lWiGT~~Gl~~~ 303 (758)
T 3ott_A 290 HNIWLGTDYGISLS 303 (758)
T ss_dssp CCEEEEESSSEEEE
T ss_pred CCEEEEeCCccccc
Confidence 87666554224443
No 350
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=91.75 E-value=4 Score=32.20 Aligned_cols=220 Identities=13% Similarity=0.143 Sum_probs=110.7
Q ss_pred eeEEeeec-ceeeEEEEeeccceeeEEEEE----cccccceEEeeEEecC----CchhhhhhhhhhccCceEEEEEecCc
Q 024185 12 QALLFARQ-NIILILLESLCGIYQCMIIEF----FATSKGIRRGLFLSAC----LQLMIALCLVLLTTALEYGIFVLMLA 82 (271)
Q Consensus 12 ~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~----~~~~~~~v~~~~~s~~----~~~~~~~~l~s~~~dg~i~iwd~~~~ 82 (271)
..++++.. .+.+..++...+... .+.. +....+....++++|+ +.. ++ ..+...++.|.-|....+
T Consensus 43 G~llVter~~G~I~~v~~~~g~~~--~v~~~~~v~~~g~~GllGia~~Pdf~~~g~l-Yv--~yt~~~~~~v~R~~~~~~ 117 (347)
T 3das_A 43 GDLLVSSRDEATITRVDAKTGRKT--ELGEVPGVSPSGEGGLLGIALSPDYASDHMV-YA--YFTSASDNRIVRMLYDEK 117 (347)
T ss_dssp SCEEEEETTTCEEEEECTTTCCEE--EEEECTTCCCBTTBSEEEEEECTTHHHHCEE-EE--EEECSSSEEEEEEEBCTT
T ss_pred CcEEEEEecCCEEEEEECCCCcEe--eecccCceeecCCCCceeeEeccccccCCEE-EE--EEecCCCCEEEEEEeCCC
Confidence 45666665 788888765444222 1111 2233455678999985 333 11 112234555666665441
Q ss_pred --------ceeE---EEe---cCCcceEEEcCCCCEEEEEec-------------CCeEEEEeCCCCC--CCcc---eEE
Q 024185 83 --------SFQG---ILR---LRGRPTVAFDQQGLVFAVAME-------------AGAIKLFDSRSYD--KGPF---DTF 130 (271)
Q Consensus 83 --------~~~~---~~~---~~~~~~~~~~~~~~~l~~~~~-------------d~~i~i~d~~~~~--~~~~---~~~ 130 (271)
.... .+. .|....+.|.|||.+.++.+. .|.|.-.+....- -.|+ ..+
T Consensus 118 ~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nPf~~~~i~ 197 (347)
T 3das_A 118 KPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNPFPGSPVY 197 (347)
T ss_dssp SCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCSSTTCCEE
T ss_pred CcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCCCCCCeEE
Confidence 1111 122 244455999999986666432 3555555554320 0001 122
Q ss_pred EecCCccceEEEEEcCCCcEEEEEe-cCCeEEEEECCCCeE------------------EEEeecCCCCCceeeEEECCC
Q 024185 131 LVGGDTAEVCDIKFSNDGKSMLLTT-TNNNIYVLDAYGGEK------------------RCGFSLEPSPNTNTEATFTPD 191 (271)
Q Consensus 131 ~~~~~~~~v~~~~~s~~~~~l~~~~-~d~~i~~~d~~~~~~------------------~~~~~~~~~~~~v~~~~~~~~ 191 (271)
. .+|. ....++|+|+|.+.++=. .++.=.|--+..+.. +..+..+ ......++|. +
T Consensus 198 a-~G~R-Np~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~--~~ap~G~~~~-~ 272 (347)
T 3das_A 198 S-YGHR-NVQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWSTD--EASPSGIAYA-E 272 (347)
T ss_dssp E-BCCS-BCCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECTT--TCCEEEEEEE-T
T ss_pred e-eCCC-CcceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCCC--CCCCcceEEE-c
Confidence 2 2453 355789999877544432 232222222222211 1111100 0123445554 3
Q ss_pred CCEEEEecCCCcEEEEEcCCcee----EEEecCCcceeEEEEEecCCcEEEEeC
Q 024185 192 GQYVVSGSGDGTLHAWNINTRNE----VACWNGNIGVVACLKWAPRRAMFVAAS 241 (271)
Q Consensus 192 ~~~l~~~~~dg~i~iwd~~~~~~----~~~~~~~~~~v~~~~~s~~~~~l~~~~ 241 (271)
|..+...-..+.|....+..... ...+.+..+.+..++..|||.++++.+
T Consensus 273 g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~td 326 (347)
T 3das_A 273 GSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLVTS 326 (347)
T ss_dssp TEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEEEC
T ss_pred CceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEEEc
Confidence 55555555556677667654432 223444456789999999998877765
No 351
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=91.73 E-value=7.2 Score=35.47 Aligned_cols=39 Identities=13% Similarity=0.167 Sum_probs=33.9
Q ss_pred ceEEEEEcCCCcEEEEEecCCeEEEEECCCCeEEEEeec
Q 024185 138 EVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSL 176 (271)
Q Consensus 138 ~v~~~~~s~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~ 176 (271)
.+.+++..++..++++-+.|+++|+|++.+++++.+...
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~dL 275 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIEL 275 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEEC
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeecc
Confidence 467778888889999999999999999999999887543
No 352
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=88.10 E-value=8.8 Score=30.68 Aligned_cols=169 Identities=10% Similarity=0.084 Sum_probs=96.8
Q ss_pred ceEEEEEecCc--ceeEEEecCC--------cceEEEc---CC----CCEEEEEe-cCCeEEEEeCCCCCCC--------
Q 024185 72 LEYGIFVLMLA--SFQGILRLRG--------RPTVAFD---QQ----GLVFAVAM-EAGAIKLFDSRSYDKG-------- 125 (271)
Q Consensus 72 g~i~iwd~~~~--~~~~~~~~~~--------~~~~~~~---~~----~~~l~~~~-~d~~i~i~d~~~~~~~-------- 125 (271)
-+|.+||+.++ +.++.+.... ...+.+. |+ +.+.+.+. ..+.|.++|+.+++..
T Consensus 123 pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~ 202 (381)
T 3q6k_A 123 PAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFK 202 (381)
T ss_dssp CEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGS
T ss_pred ceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCc
Confidence 36889999999 8888886531 2225555 32 34555553 3568999999886630
Q ss_pred --cceEEEecCC----ccceEEEEEcCC----CcEEEEEecCCeEEEEEC-----CCC---eEEEEeecCCCCCceeeEE
Q 024185 126 --PFDTFLVGGD----TAEVCDIKFSND----GKSMLLTTTNNNIYVLDA-----YGG---EKRCGFSLEPSPNTNTEAT 187 (271)
Q Consensus 126 --~~~~~~~~~~----~~~v~~~~~s~~----~~~l~~~~~d~~i~~~d~-----~~~---~~~~~~~~~~~~~~v~~~~ 187 (271)
....+...+. ...+..++.+|+ ++.|+.....+ -++|.+ ++. ..++.+........-..++
T Consensus 203 pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss-~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~ 281 (381)
T 3q6k_A 203 AERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSA-IKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALA 281 (381)
T ss_dssp CCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSC-SEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEE
T ss_pred cccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCC-CcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEE
Confidence 0011111221 146888999997 77777765543 233332 222 1122222111112244467
Q ss_pred EC-CCCCEEEEecCCCcEEEEEcCC-c---eeEEEe--cCCcceeEEEEEecCCcEEEEeC
Q 024185 188 FT-PDGQYVVSGSGDGTLHAWNINT-R---NEVACW--NGNIGVVACLKWAPRRAMFVAAS 241 (271)
Q Consensus 188 ~~-~~~~~l~~~~~dg~i~iwd~~~-~---~~~~~~--~~~~~~v~~~~~s~~~~~l~~~~ 241 (271)
++ .+|..+++--..+.|..|+..+ . +....+ ...-..+..+.+.++|.+.+.++
T Consensus 282 ~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~sn 342 (381)
T 3q6k_A 282 YDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKGGLWFMSN 342 (381)
T ss_dssp ECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTSCEEEEEC
T ss_pred EeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECCCccccCeEEECCCCeEEEEEC
Confidence 75 6787777777788999999875 1 122222 11223567888888887666665
No 353
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=87.73 E-value=16 Score=33.26 Aligned_cols=38 Identities=24% Similarity=0.116 Sum_probs=33.0
Q ss_pred CceeeEEECCCCCEEEEecCCCcEEEEEcCCceeEEEe
Q 024185 181 NTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACW 218 (271)
Q Consensus 181 ~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 218 (271)
..+.++...++..++++-+.|+++++|++.+++++.+.
T Consensus 236 ~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 236 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp TCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred ceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 34667777888899999999999999999999998865
No 354
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=87.61 E-value=7.7 Score=29.43 Aligned_cols=155 Identities=12% Similarity=0.068 Sum_probs=89.9
Q ss_pred EEEEEeeecceeEEeeecceeeEEEEeecc--ceeeEEEEEcccccceEEeeEEec-CCchhhhhhhhhhccCceEEEEE
Q 024185 2 VLIVFALPITQALLFARQNIILILLESLCG--IYQCMIIEFFATSKGIRRGLFLSA-CLQLMIALCLVLLTTALEYGIFV 78 (271)
Q Consensus 2 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~s~-~~~~~~~~~l~s~~~dg~i~iwd 78 (271)
++.++....++.+++.++.|.++.+....- ..... + +.. ...+..+.... +... ++..+.+|.++-..
T Consensus 26 ~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~~~~-l--l~~-~e~i~~v~~~~~~~~~-----~v~~T~~G~iKr~~ 96 (276)
T 3no0_A 26 VVNILRVPFTEGLFLVSNRGRVYWIAGSQALQGSKVS-L--KSR-EEKIVGAFIREKFGNR-----LLLATKKGYVKKIP 96 (276)
T ss_dssp EEEEEEEETTSCEEEEETTSEEEEECSHHHHTSEECC-C--SST-TCCEEEEEEGGGSCSE-----EEEEETTSEEEEEE
T ss_pred EEEEEEECCCCEEEEEcCCCeEEEEEhhhCccCcccc-c--CCC-CCEEEEEECCcCCCCE-----EEEEeCCCEEEEEE
Confidence 455677778889999999999998775431 00011 1 333 33444443321 3444 66789999999988
Q ss_pred ecCcc------eeEEEecC-CcceEEEcCCCCEEEEEecCCeEEEEeCCCCCC-----CcceEEEecCCccceEEEEEcC
Q 024185 79 LMLAS------FQGILRLR-GRPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDK-----GPFDTFLVGGDTAEVCDIKFSN 146 (271)
Q Consensus 79 ~~~~~------~~~~~~~~-~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~-----~~~~~~~~~~~~~~v~~~~~s~ 146 (271)
+..-. ....+... .+-.+........++..+.+|.++.++...-.. .-.....+.. ...|..+...+
T Consensus 97 l~~~~~~~~G~~~i~lkegD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~~-~d~vv~~~~~~ 175 (276)
T 3no0_A 97 LAEFEYKAQGMPIIKLTEGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLEK-NDETSGLRIWN 175 (276)
T ss_dssp GGGTTTCSTTEECSCCCTTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCT-TCCEEEEEEES
T ss_pred HHHhhhhcCCeEEEecCCCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccCC-CCEEEEEEEeC
Confidence 75432 11112221 222233444556788888899988887532110 1111223332 24566655555
Q ss_pred CCcEEEEEecCCeEEEEECC
Q 024185 147 DGKSMLLTTTNNNIYVLDAY 166 (271)
Q Consensus 147 ~~~~l~~~~~d~~i~~~d~~ 166 (271)
++..++..+..|.++...+.
T Consensus 176 ~~~~ll~~T~~G~~kr~~~~ 195 (276)
T 3no0_A 176 GEPYLLVITAKGRVKKISHE 195 (276)
T ss_dssp SCSEEEEEETTSCEEEEEGG
T ss_pred CCCEEEEEeCCCcEEEeEHH
Confidence 66788888999998888764
No 355
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=84.92 E-value=5 Score=34.24 Aligned_cols=58 Identities=14% Similarity=0.159 Sum_probs=41.3
Q ss_pred eeeEEECCCCCEEEEecCC------------CcEEEEEcCCceeEEEecCC-cceeEEEEEecCCcEEEEe
Q 024185 183 NTEATFTPDGQYVVSGSGD------------GTLHAWNINTRNEVACWNGN-IGVVACLKWAPRRAMFVAA 240 (271)
Q Consensus 183 v~~~~~~~~~~~l~~~~~d------------g~i~iwd~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~ 240 (271)
.-.++|+|.|++++.-..+ ..+.+.+..+++...-+.++ ...++.++|+||++.|...
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 3558999999966654322 24666677777776655544 4679999999999987766
No 356
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=83.54 E-value=7.2 Score=36.27 Aligned_cols=37 Identities=22% Similarity=0.085 Sum_probs=31.6
Q ss_pred ceeeEEECCCCCEEEEecCCCcEEEEEcCCceeEEEe
Q 024185 182 TNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACW 218 (271)
Q Consensus 182 ~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 218 (271)
.+.+++..++..++++-+.|+++++|++.+++++.+.
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 3455666788899999999999999999999998875
No 357
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=83.45 E-value=8.2 Score=32.73 Aligned_cols=60 Identities=12% Similarity=0.138 Sum_probs=42.5
Q ss_pred ceeeEEECCCCCEEEEecC------------CCcEEEEEcCCceeEEEecCC-cceeEEEEEecCCcEEEEeC
Q 024185 182 TNTEATFTPDGQYVVSGSG------------DGTLHAWNINTRNEVACWNGN-IGVVACLKWAPRRAMFVAAS 241 (271)
Q Consensus 182 ~v~~~~~~~~~~~l~~~~~------------dg~i~iwd~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~~ 241 (271)
....+.|+++|.+.+.... ...+..++..+++....+.+. ...++.++|+||++.|..+-
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 3556899999987773321 125777777778776655543 35689999999999887763
No 358
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=83.14 E-value=23 Score=31.01 Aligned_cols=196 Identities=8% Similarity=-0.002 Sum_probs=103.5
Q ss_pred eEEeeE-EecCCchhhhhhhhh-hccCceEEEEEecCcceeE-EEe-cCCc--------ceEEEcCCCCEEEEEe-----
Q 024185 47 IRRGLF-LSACLQLMIALCLVL-LTTALEYGIFVLMLASFQG-ILR-LRGR--------PTVAFDQQGLVFAVAM----- 109 (271)
Q Consensus 47 ~v~~~~-~s~~~~~~~~~~l~s-~~~dg~i~iwd~~~~~~~~-~~~-~~~~--------~~~~~~~~~~~l~~~~----- 109 (271)
....+. ++|+++++++. +-- |+.-..++++|+++++.+. .+. .... ..++|..+.. ++.+.
T Consensus 130 ~~~g~~~~~~~~~~~~~~-ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~-~~~~~~~~~~ 207 (711)
T 4hvt_A 130 AYRGVSNCFQNPNRYLIS-MSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDT-IIFNLVLHKN 207 (711)
T ss_dssp EEEEEEECSSSTTEEEEE-EEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTE-EEECCCCSTT
T ss_pred EEeceeecCCCCCEEEEE-eCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCE-EEEEeCCCCC
Confidence 344555 78888875442 222 3344579999999988653 222 1111 3358874344 44432
Q ss_pred ------cCCeEEEEeCCCCCCCcceEEEecCCccc-eEEEEEcCCCcE-----EEEEec---CCeEEEEECCC--CeEEE
Q 024185 110 ------EAGAIKLFDSRSYDKGPFDTFLVGGDTAE-VCDIKFSNDGKS-----MLLTTT---NNNIYVLDAYG--GEKRC 172 (271)
Q Consensus 110 ------~d~~i~i~d~~~~~~~~~~~~~~~~~~~~-v~~~~~s~~~~~-----l~~~~~---d~~i~~~d~~~--~~~~~ 172 (271)
....|+.|.+-+....- ...+.+.... -.....++++++ +++.+. ...+.+.|... ++ ..
T Consensus 208 ~~~~~~~~~~v~~~~~Gt~~~~~--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~ 284 (711)
T 4hvt_A 208 EITSSLYPNSLYIWKRGESIEKA--KKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLK-LQ 284 (711)
T ss_dssp CBCTTSSBCEEEEEETTSCGGGC--EEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCE-EE
T ss_pred CcCcCCCCCEEEEEECCCChHHC--eEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCc-ce
Confidence 12468888887654311 2223332222 234555667663 444332 24566767553 43 23
Q ss_pred EeecCCCCCceeeEEECCCCCEEEEec----------CCCcEEEEEcCCce-------eEEE-e-cCCcceeEEEEEecC
Q 024185 173 GFSLEPSPNTNTEATFTPDGQYVVSGS----------GDGTLHAWNINTRN-------EVAC-W-NGNIGVVACLKWAPR 233 (271)
Q Consensus 173 ~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~dg~i~iwd~~~~~-------~~~~-~-~~~~~~v~~~~~s~~ 233 (271)
.+...... .+..++++.+++... ..+.|...|+.++. .... + ......+..+.|..+
T Consensus 285 ~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 360 (711)
T 4hvt_A 285 KINMPSDA----TLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD 360 (711)
T ss_dssp ECCSCTTC----EEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS
T ss_pred EeecCCcc----eEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC
Confidence 33222221 123445666555331 35789999987642 2222 3 233456788888876
Q ss_pred CcEEEEeC----CeEEEEcCCCC
Q 024185 234 RAMFVAAS----SVLSFWIPNPS 252 (271)
Q Consensus 234 ~~~l~~~~----~~v~iw~~~~~ 252 (271)
.++++.. ..+.++++.++
T Consensus 361 -~l~~~~~~~~~~~l~~~~~~~g 382 (711)
T 4hvt_A 361 -RVFLATYDNVVAKVVTFTLENE 382 (711)
T ss_dssp -CEEEEEEETTEEEEEEECEETT
T ss_pred -EEEEEEEECCEEEEEEEECCCC
Confidence 4444443 45888888665
No 359
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=82.44 E-value=4.4 Score=37.65 Aligned_cols=39 Identities=13% Similarity=0.167 Sum_probs=32.5
Q ss_pred ceEEEEEcCCCcEEEEEecCCeEEEEECCCCeEEEEeec
Q 024185 138 EVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSL 176 (271)
Q Consensus 138 ~v~~~~~s~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~ 176 (271)
.+.+++..++..++++-+.|+++|+|++.+++++.+...
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~DL 277 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIEL 277 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEEC
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeech
Confidence 345566777888999999999999999999999887553
No 360
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=82.16 E-value=9 Score=32.69 Aligned_cols=59 Identities=24% Similarity=0.290 Sum_probs=41.6
Q ss_pred eEEEEEcCCCcEEEEEecC------------CeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEe
Q 024185 139 VCDIKFSNDGKSMLLTTTN------------NNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSG 198 (271)
Q Consensus 139 v~~~~~s~~~~~l~~~~~d------------~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 198 (271)
.-.|+|+|.|.+++.-..+ ..+.+.+..+++..+.+.... ..-++.++|+||++.|+..
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~-gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPI-GCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCT-TCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCC-CccCcCeeECCCCCEEEEE
Confidence 4678999999866554322 346667777787766665543 3568999999999988765
No 361
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=81.51 E-value=15 Score=27.79 Aligned_cols=168 Identities=8% Similarity=-0.017 Sum_probs=79.5
Q ss_pred CceEEEEEecCcceeEEEecC-CcceEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCc
Q 024185 71 ALEYGIFVLMLASFQGILRLR-GRPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGK 149 (271)
Q Consensus 71 dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 149 (271)
||.++.|-......+.. +.. ......++......+.-. +|.|+.|=......-.... .....|..++...+..
T Consensus 80 ~G~v~~wG~n~~Gqlg~-P~~~~~~v~~ia~G~~hs~al~-~G~v~~wG~n~~gqlg~~~----~~~~~i~~i~~G~~~~ 153 (282)
T 3qhy_B 80 DGEVIAWGGNEDGQTTV-PAEARSGVDAIAAGAWASYALK-DGKVIAWGDDSDGQTTVPA----EAQSGVTALDGGVYTA 153 (282)
T ss_dssp TTEEEEEECCTTSTTCC-CGGGSSSEEEEEEETTEEEEEE-TTEEEEEECCTTSTTSCCG----GGGSSEEEEEECSSEE
T ss_pred CCEEEEeeCCCCCCCCC-CcccCCCeEEEECcCCEEEEEe-CCeEEEecCCCCCcCCCCc----cCCCCeEEEEcccCEE
Confidence 88888886543211110 000 112333333333444445 8889998765432211111 1234577776554433
Q ss_pred EEEEEecCCeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCCceeEEEecCCcceeEEEE
Q 024185 150 SMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLK 229 (271)
Q Consensus 150 ~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~ 229 (271)
++ -. ||.++.|-......+.. .... ...+..++-..+. .++. .||.++.|-......+-.-......|..++
T Consensus 154 -~~-l~-~G~v~~wG~n~~gqlg~-p~~~-~~~v~~i~~G~~h-s~al--~~G~v~~wG~n~~gqlg~p~~~~~~v~~i~ 225 (282)
T 3qhy_B 154 -LA-VK-NGGVIAWGDNYFGQTTV-PAEA-QSGVDDVAGGIFH-SLAL--KDGKVIAWGDNRYKQTTVPTEALSGVSAIA 225 (282)
T ss_dssp -EE-EE-TTEEEEEECCTTSTTSC-CGGG-GSSEEEEEECSSE-EEEE--ETTEEEEEECCTTSTTCCCGGGGSSCCEEE
T ss_pred -EE-EE-CCEEEEecCCCCCCCCC-ceec-CCCeEEEEecCCE-EEEE--ECCeEEEEECCCCCCCCCCcccCCCceEEE
Confidence 22 23 78999997543211110 0000 1225555544332 2233 588888886543211110001123466666
Q ss_pred EecCCcEEEEeCCeEEEEcCCCCC
Q 024185 230 WAPRRAMFVAASSVLSFWIPNPSS 253 (271)
Q Consensus 230 ~s~~~~~l~~~~~~v~iw~~~~~~ 253 (271)
-..+....++ +|.+..|=.....
T Consensus 226 ~G~~h~~al~-~g~v~~wG~n~~g 248 (282)
T 3qhy_B 226 SGEWYSLALK-NGKVIAWGSSRTA 248 (282)
T ss_dssp ECSSCEEEEE-TTEEEEESTTCCC
T ss_pred cCCCEEEEEE-CCEEEEecCCCCc
Confidence 5555556666 7888888665543
No 362
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=80.93 E-value=19 Score=28.56 Aligned_cols=108 Identities=9% Similarity=0.032 Sum_probs=52.9
Q ss_pred ceEEEEEcC-C-CcEEEEEecCCeEEEEECCCCeEEEEeec---C--------------CCCCceeeEEECCC-CCEEEE
Q 024185 138 EVCDIKFSN-D-GKSMLLTTTNNNIYVLDAYGGEKRCGFSL---E--------------PSPNTNTEATFTPD-GQYVVS 197 (271)
Q Consensus 138 ~v~~~~~s~-~-~~~l~~~~~d~~i~~~d~~~~~~~~~~~~---~--------------~~~~~v~~~~~~~~-~~~l~~ 197 (271)
.|.++++.| + ...+.++...+.|...+ ..++.-..+.. + .....+.++.++|. ...+..
T Consensus 116 ~i~~l~~~~~~~~~~l~~g~~~ggl~~S~-DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~v 194 (394)
T 3b7f_A 116 HVFWLTPGHASEPGTWYAGTSPQGLFRST-DHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYI 194 (394)
T ss_dssp EEEEEEECCTTSTTCEEEEEETTEEEEES-STTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEE
T ss_pred ceeEEEeCCCCCCCEEEEEecCCcEEEEc-CCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEE
Confidence 577889987 2 45677766666666554 22322122211 0 11124678889883 344444
Q ss_pred ecCCCcEEEEEcCCceeEEEecC-----C--------cceeEEEEEecC-CcEEEEeC-CeEEEE
Q 024185 198 GSGDGTLHAWNINTRNEVACWNG-----N--------IGVVACLKWAPR-RAMFVAAS-SVLSFW 247 (271)
Q Consensus 198 ~~~dg~i~iwd~~~~~~~~~~~~-----~--------~~~v~~~~~s~~-~~~l~~~~-~~v~iw 247 (271)
+..++.|...+ ..++.-..+.. + ...+.++.++|+ ...|..+. +.|...
T Consensus 195 g~~~ggl~~s~-DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~gl~~s 258 (394)
T 3b7f_A 195 GMSSGGVFEST-DAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCGIYRM 258 (394)
T ss_dssp EEETBEEEEES-STTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTEEEEE
T ss_pred EECCCCEEEEC-CCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCeEEEe
Confidence 54444343332 22332222211 0 124788999886 23444443 444443
No 363
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=79.42 E-value=22 Score=28.39 Aligned_cols=136 Identities=10% Similarity=0.139 Sum_probs=75.9
Q ss_pred eEEEEeCCCC--CCCcceEEEecC----CccceEEEEEc---CC----CcEEEEEe-cCCeEEEEECCCCeEEEEeecCC
Q 024185 113 AIKLFDSRSY--DKGPFDTFLVGG----DTAEVCDIKFS---ND----GKSMLLTT-TNNNIYVLDAYGGEKRCGFSLEP 178 (271)
Q Consensus 113 ~i~i~d~~~~--~~~~~~~~~~~~----~~~~v~~~~~s---~~----~~~l~~~~-~d~~i~~~d~~~~~~~~~~~~~~ 178 (271)
.|.+||+.++ +. ++...+.. ....+..+++. |+ +.+++.+. ..+.|.++|+.+++.-+......
T Consensus 124 kLv~~DL~t~~~~l--i~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~ 201 (381)
T 3q6k_A 124 AIVAYDLKQPNYPE--VVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTF 201 (381)
T ss_dssp EEEEEESSSTTCCE--EEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGG
T ss_pred eEEEEECCCCCcee--EEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCC
Confidence 5677888777 54 44444421 23457788877 22 34444443 36789999999987665542110
Q ss_pred C----------------CCceeeEEECCC----CCEEEEecCCCcEEEEEcC-----Cc---eeEEEe--cCCcceeEEE
Q 024185 179 S----------------PNTNTEATFTPD----GQYVVSGSGDGTLHAWNIN-----TR---NEVACW--NGNIGVVACL 228 (271)
Q Consensus 179 ~----------------~~~v~~~~~~~~----~~~l~~~~~dg~i~iwd~~-----~~---~~~~~~--~~~~~~v~~~ 228 (271)
. ...+..++++|+ ++.|+.....+ -++|.+. +. ..++.+ ++....-..+
T Consensus 202 ~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss-~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~ 280 (381)
T 3q6k_A 202 KAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSA-IKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIAL 280 (381)
T ss_dssp SCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSC-SEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEE
T ss_pred ccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCC-CcEEEEEHHHhhCcchhhceEEeeecCCCCCcceE
Confidence 0 124777888988 67777665443 2233322 11 112222 1111222355
Q ss_pred EEe-cCCcEEEEeC--CeEEEEcCCC
Q 024185 229 KWA-PRRAMFVAAS--SVLSFWIPNP 251 (271)
Q Consensus 229 ~~s-~~~~~l~~~~--~~v~iw~~~~ 251 (271)
+.. .+|.++++-- +.|..|+..+
T Consensus 281 ~~D~~~G~ly~~~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 281 AYDPKTKVIFFAEANTKQVSCWNTQK 306 (381)
T ss_dssp EECTTTCEEEEEESSSSEEEEEETTS
T ss_pred EEeCCCCeEEEEeccCCeEEEEeCCC
Confidence 665 5676555554 7799999875
No 364
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=77.40 E-value=21 Score=30.31 Aligned_cols=62 Identities=24% Similarity=0.274 Sum_probs=41.9
Q ss_pred cceEEEEEcCCCcEEEEEec------------CCeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEec
Q 024185 137 AEVCDIKFSNDGKSMLLTTT------------NNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGS 199 (271)
Q Consensus 137 ~~v~~~~~s~~~~~l~~~~~------------d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 199 (271)
.....|.|.++|.+.+.... ...+..++..+++....+.... ...++.++|+||++.|++.-
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~-~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPI-GCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCT-TCEEEEEEECTTSSEEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCC-CccccCCEECCCCCEEEEEE
Confidence 34567999999986663321 1267777777787655554322 23478899999999887653
No 365
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=77.39 E-value=23 Score=27.50 Aligned_cols=149 Identities=12% Similarity=0.128 Sum_probs=78.3
Q ss_pred CCCCEEEEEecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEecCCeEEEEEC---CC------CeE
Q 024185 100 QQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDA---YG------GEK 170 (271)
Q Consensus 100 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~---~~------~~~ 170 (271)
|+...+++.+.+|.|+--.+...+........+... +.+..+........++..+..|.+.-+.. +. |.+
T Consensus 3 ~~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lke~-D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~~ 81 (323)
T 1wp5_A 3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMKDT-DRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQH 81 (323)
T ss_dssp SCCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCCTT-CCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCEE
T ss_pred cCCcEEEEEeCCCEEEEeEHHHhhhcCccccccCCC-CEEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCCCcC
Confidence 567788889999999877654211000001223332 44545544555566777777888666554 22 332
Q ss_pred EEE-eecCCCCCceeeE-EECC--CCCEEEEecCCCcEEEEEcCC--------ceeEEEecCCcceeEEEEEe-cCCcEE
Q 024185 171 RCG-FSLEPSPNTNTEA-TFTP--DGQYVVSGSGDGTLHAWNINT--------RNEVACWNGNIGVVACLKWA-PRRAMF 237 (271)
Q Consensus 171 ~~~-~~~~~~~~~v~~~-~~~~--~~~~l~~~~~dg~i~iwd~~~--------~~~~~~~~~~~~~v~~~~~s-~~~~~l 237 (271)
+.. +..... ..|..+ ...+ ++.+++..+.+|.++...+.. +.....+... ..+..+... ++..++
T Consensus 82 i~~~i~L~~~-e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e~-d~lv~~~~~~~~~~i~ 159 (323)
T 1wp5_A 82 IANIIPIDRD-EEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKND-DQVVDVHLTDGMNELF 159 (323)
T ss_dssp GGGTSCCCTT-CCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTT-CCEEEEEEECSCSEEE
T ss_pred hhhccCCCCC-CEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCCC-CEEEEEEEeCCCCEEE
Confidence 222 111122 224443 3332 356889999999999988742 1111123322 334444443 344455
Q ss_pred EEeC-CeEEEEcCCC
Q 024185 238 VAAS-SVLSFWIPNP 251 (271)
Q Consensus 238 ~~~~-~~v~iw~~~~ 251 (271)
+..+ |.+..+....
T Consensus 160 l~T~~G~~irf~~~e 174 (323)
T 1wp5_A 160 LVTHNGYALWFDESE 174 (323)
T ss_dssp EEETTSEEEEEEGGG
T ss_pred EEeCCCcEEEEEHHH
Confidence 4444 7777776644
No 366
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=77.33 E-value=21 Score=26.99 Aligned_cols=165 Identities=9% Similarity=-0.025 Sum_probs=75.7
Q ss_pred CceEEEEEecCcceeEE--EecCCcceEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCC
Q 024185 71 ALEYGIFVLMLASFQGI--LRLRGRPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDG 148 (271)
Q Consensus 71 dg~i~iwd~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 148 (271)
||.++.|-......+.. .....+..++...+ ..++. . ||.|+.|-......-.... . -...|..++...+.
T Consensus 41 ~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~-hs~~l-~-~G~v~~wG~n~~Gqlg~P~-~---~~~~v~~ia~G~~h 113 (282)
T 3qhy_B 41 GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNY-HSLAL-K-DGEVIAWGGNEDGQTTVPA-E---ARSGVDAIAAGAWA 113 (282)
T ss_dssp TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSS-EEEEE-E-TTEEEEEECCTTSTTCCCG-G---GSSSEEEEEEETTE
T ss_pred CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCC-EEEEE-E-CCEEEEeeCCCCCCCCCCc-c---cCCCeEEEECcCCE
Confidence 88899886543221110 01112333333322 22333 4 8999998765432200000 0 12467777766543
Q ss_pred cEEEEEecCCeEEEEECCCCeEEEEeecCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCCceeEEEecCCcceeEEE
Q 024185 149 KSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACL 228 (271)
Q Consensus 149 ~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~ 228 (271)
. +.-. ||.|+.|-......+..-.... ..+..++...+. .+.-. ||.++.|-......+..-..-...|..+
T Consensus 114 s--~al~-~G~v~~wG~n~~gqlg~~~~~~--~~i~~i~~G~~~--~~~l~-~G~v~~wG~n~~gqlg~p~~~~~~v~~i 185 (282)
T 3qhy_B 114 S--YALK-DGKVIAWGDDSDGQTTVPAEAQ--SGVTALDGGVYT--ALAVK-NGGVIAWGDNYFGQTTVPAEAQSGVDDV 185 (282)
T ss_dssp E--EEEE-TTEEEEEECCTTSTTSCCGGGG--SSEEEEEECSSE--EEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEE
T ss_pred E--EEEe-CCeEEEecCCCCCcCCCCccCC--CCeEEEEcccCE--EEEEE-CCEEEEecCCCCCCCCCceecCCCeEEE
Confidence 3 3334 8999999754321111000011 225555443332 22223 6888888654311111000112346666
Q ss_pred EEecCCcEEEEeCCeEEEEcCCC
Q 024185 229 KWAPRRAMFVAASSVLSFWIPNP 251 (271)
Q Consensus 229 ~~s~~~~~l~~~~~~v~iw~~~~ 251 (271)
+-..+...++ .+|.+..|=...
T Consensus 186 ~~G~~hs~al-~~G~v~~wG~n~ 207 (282)
T 3qhy_B 186 AGGIFHSLAL-KDGKVIAWGDNR 207 (282)
T ss_dssp EECSSEEEEE-ETTEEEEEECCT
T ss_pred EecCCEEEEE-ECCeEEEEECCC
Confidence 5544433334 447788886544
No 367
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=75.11 E-value=7.6 Score=33.89 Aligned_cols=37 Identities=11% Similarity=0.133 Sum_probs=30.1
Q ss_pred ceEEEEEcCCCcEEEEEecCCeEEEEECCCCeEEEEeec
Q 024185 138 EVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSL 176 (271)
Q Consensus 138 ~v~~~~~s~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~ 176 (271)
.|.++.+ +..++++-+.|.++|+||+++++++.....
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 3555544 467999999999999999999998887665
No 368
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=66.96 E-value=11 Score=32.94 Aligned_cols=30 Identities=10% Similarity=0.340 Sum_probs=26.3
Q ss_pred CCCCEEEEecCCCcEEEEEcCCceeEEEec
Q 024185 190 PDGQYVVSGSGDGTLHAWNINTRNEVACWN 219 (271)
Q Consensus 190 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 219 (271)
.+..++++-+.|.++|+|++++++++....
T Consensus 229 ~~~~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 229 FHERYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp ETTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred cCCcEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 347799999999999999999999887764
No 369
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=66.18 E-value=44 Score=25.96 Aligned_cols=108 Identities=15% Similarity=0.229 Sum_probs=67.3
Q ss_pred CCCEEEEEecCCeEEEEeCCCCCC---CcceEEEecCCccceEEEEEcCCCcEEEEEecCCeEEEEECC--CCe------
Q 024185 101 QGLVFAVAMEAGAIKLFDSRSYDK---GPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAY--GGE------ 169 (271)
Q Consensus 101 ~~~~l~~~~~d~~i~i~d~~~~~~---~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~--~~~------ 169 (271)
+..+++..+.+|.++.-.+..... .......+.. .+.+..+........++..+..|.+..+... .-.
T Consensus 108 ~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill~T~~G~~~rf~~~~~eip~~gr~a 186 (327)
T 3uc1_A 108 DAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLLVSANGQSIRFSATDEALRPMGRAT 186 (327)
T ss_dssp SSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEECCTTTSCCCCTTS
T ss_pred CCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEEEECCCeEEEEECcccccCcCCcCC
Confidence 577899999999999988754332 1122233433 3445555555556678888889998888765 211
Q ss_pred -EEEEeecCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcC
Q 024185 170 -KRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNIN 210 (271)
Q Consensus 170 -~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~ 210 (271)
-+.-+..... ..|.++...+++.+++..+..|.++.-.+.
T Consensus 187 ~Gv~~i~L~~~-d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~ 227 (327)
T 3uc1_A 187 SGVQGMRFNID-DRLLSLNVVREGTYLLVATSGGYAKRTAIE 227 (327)
T ss_dssp BCEESSCCCTT-CCEEEEEECCTTCEEEEEETTSEEEEEEGG
T ss_pred CCeeeecCCCC-CEEEEEEEECCCCEEEEEeCCCcEEEEEHH
Confidence 1111222221 236666555666788999999999888764
No 370
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=62.51 E-value=57 Score=25.89 Aligned_cols=154 Identities=13% Similarity=0.117 Sum_probs=76.8
Q ss_pred ceEEEcCCCCEEEEEecCCeEEEEeCCCC-CC-----Ccce-EEEecC-CccceEEEEEcCCCcEEEEEecCCeEEEEEC
Q 024185 94 PTVAFDQQGLVFAVAMEAGAIKLFDSRSY-DK-----GPFD-TFLVGG-DTAEVCDIKFSNDGKSMLLTTTNNNIYVLDA 165 (271)
Q Consensus 94 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~~-~~-----~~~~-~~~~~~-~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~ 165 (271)
..++++......++-..+|.|+.|-.... ++ .... ...+.. ....|..++.. ....++...+|.|+.|-.
T Consensus 108 ~~v~i~~G~~h~~al~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va~G--~~hs~alt~~G~v~~wG~ 185 (389)
T 3kci_A 108 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAG--GAHSACVTAAGDLYTWGK 185 (389)
T ss_dssp EEEEECTTCSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEEC--SSEEEEEETTSCEEEEEC
T ss_pred eEEEECcCCCeEEEEcCCCCEEEEeCCCCCcCCCCCCccCcCCeEecccCCCeEEEEEeC--cCeEEEEeCCCeEEEeCC
Confidence 33677766777777788999999964321 11 0011 111111 11245555544 344555667899999964
Q ss_pred CC-C---------e-EEEEeecCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCC-c----------eeEEEecCC-c
Q 024185 166 YG-G---------E-KRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINT-R----------NEVACWNGN-I 222 (271)
Q Consensus 166 ~~-~---------~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~-~----------~~~~~~~~~-~ 222 (271)
.. + . ....+.... ...+..++......+.+.-..+|.|+.|-... + .....+... .
T Consensus 186 n~~GqLG~~~~~~~~~p~~v~~~~-~~~v~~ia~G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~ 264 (389)
T 3kci_A 186 GRYGRLGHSDSEDQLKPKLVEALQ-GHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTG 264 (389)
T ss_dssp CGGGTTCSSSCCCEEEEEECGGGT-TSCEEEEEECCSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTT
T ss_pred CCCCCcCCCCCcccccceEecccC-CCeEEEEEEcCCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCC
Confidence 32 1 1 111111111 12355555443334556667788888885432 0 111222211 1
Q ss_pred ceeEEEEEecCCcEEEEeCCeEEEEcCC
Q 024185 223 GVVACLKWAPRRAMFVAASSVLSFWIPN 250 (271)
Q Consensus 223 ~~v~~~~~s~~~~~l~~~~~~v~iw~~~ 250 (271)
..|..++...+..+.++.+|.|..|=..
T Consensus 265 ~~v~~v~~G~~hs~alt~~G~v~~wG~n 292 (389)
T 3kci_A 265 LGVVKVECGSQFSVALTKSGAVYTWGKG 292 (389)
T ss_dssp SCEEEEEEETTEEEEEETTSCEEEEECC
T ss_pred CcEEEEeCCCCEEEEEeCCCeEEEEeCC
Confidence 2355665544433444444778888653
No 371
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=54.46 E-value=74 Score=24.71 Aligned_cols=202 Identities=10% Similarity=-0.005 Sum_probs=107.1
Q ss_pred EEEEeeecceeEEeeecceeeEEEEeeccc----e-eeEEE-EE--cccccceEEeeEEec--CCchhhhhhhhhhccCc
Q 024185 3 LIVFALPITQALLFARQNIILILLESLCGI----Y-QCMII-EF--FATSKGIRRGLFLSA--CLQLMIALCLVLLTTAL 72 (271)
Q Consensus 3 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~----~-~~~~~-~~--~~~~~~~v~~~~~s~--~~~~~~~~~l~s~~~dg 72 (271)
.-++.....+.+++..+.|.++.+....-- . ....+ .. +...+..+..+.... +... ++..+.+|
T Consensus 45 ~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~G~~i~~~l~l~~~e~i~~~~~~~~~~~e~~-----~v~~T~~G 119 (327)
T 3uc1_A 45 AHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTARGQHVANLLAFQPEERIAQVIQIRGYTDAPY-----LVLATRNG 119 (327)
T ss_dssp EEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSCCEEHHHHTTCCTTCCEEEEEEESSTTSSSE-----EEEEETTS
T ss_pred EEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCCCEEHHHccCCCCCCEEEEEEEeccCCCCCE-----EEEEcCCC
Confidence 345556677889988889999888753210 0 00110 01 222233333333332 3444 67889999
Q ss_pred eEEEEEecCccee-----E--EEecC-CcceEEEcCCCCEEEEEecCCeEEEEeCC--CCCC-----CcceEEEecCCcc
Q 024185 73 EYGIFVLMLASFQ-----G--ILRLR-GRPTVAFDQQGLVFAVAMEAGAIKLFDSR--SYDK-----GPFDTFLVGGDTA 137 (271)
Q Consensus 73 ~i~iwd~~~~~~~-----~--~~~~~-~~~~~~~~~~~~~l~~~~~d~~i~i~d~~--~~~~-----~~~~~~~~~~~~~ 137 (271)
.++--.+..-... . .+... ..-.+........++..+.+|.+..+... .-.. .-.....+. ...
T Consensus 120 ~iKr~~l~~~~~~~r~G~~~i~lke~D~lv~~~~~~~~d~ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~-~~d 198 (327)
T 3uc1_A 120 LVKKSKLTDFDSNRSGGIVAVNLRDNDELVGAVLCSAGDDLLLVSANGQSIRFSATDEALRPMGRATSGVQGMRFN-IDD 198 (327)
T ss_dssp EEEEEEGGGGCCCCSSCEESCBCCTTCCEEEEEEECTTCEEEEEETTSEEEEEECCTTTSCCCCTTSBCEESSCCC-TTC
T ss_pred EEEEeEHHHhhccccCceEEEEECCCCEEEEEEEecCCCEEEEEECCCeEEEEECcccccCcCCcCCCCeeeecCC-CCC
Confidence 9998877542211 1 12222 22223333445678888889998888776 2110 011112232 234
Q ss_pred ceEEEEEcCCCcEEEEEecCCeEEEEECCCCe-------EEEEeecCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcC
Q 024185 138 EVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGE-------KRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNIN 210 (271)
Q Consensus 138 ~v~~~~~s~~~~~l~~~~~d~~i~~~d~~~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~ 210 (271)
.|.++...+++..++..+..|.++.-.+.... -+..+........+..+....+...++..+.+|.+.-++..
T Consensus 199 ~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~~d~lv~~~~~~~~~~i~l~T~~G~~ir~~~~ 278 (327)
T 3uc1_A 199 RLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRGRLVGALIVDDDSELYAVTSGGGVIRTAAR 278 (327)
T ss_dssp CEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEEGGGCEEEEEGG
T ss_pred EEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCCCCeEEEEEEeCCCccEEEEcCCCeEEEEehh
Confidence 56666666666788999999999988764322 22222222211224333333334455556666666666653
No 372
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=53.69 E-value=69 Score=24.12 Aligned_cols=148 Identities=12% Similarity=0.108 Sum_probs=83.9
Q ss_pred CCCEEEEEecCCeEEEEeCCCCC--CCcceEEEecCCccceEEEEEcCCCcEEEEEecCCeEEEEECCCC-------eEE
Q 024185 101 QGLVFAVAMEAGAIKLFDSRSYD--KGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGG-------EKR 171 (271)
Q Consensus 101 ~~~~l~~~~~d~~i~i~d~~~~~--~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~~~-------~~~ 171 (271)
++.+++..+.+|.++...+.... ........+.. .+.+..+....+...++..+.+|.+..++...- +-+
T Consensus 79 ~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lke-gD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv 157 (276)
T 3no0_A 79 FGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLTE-GDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGV 157 (276)
T ss_dssp SCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCCT-TCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCE
T ss_pred CCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecCC-CCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCE
Confidence 46789999999999998875532 11122223333 345666555556667888899999888875321 111
Q ss_pred EEeecCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCC-------ceeEEEecCCcceeEEEEE-ecCCcEEEEeC-C
Q 024185 172 CGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINT-------RNEVACWNGNIGVVACLKW-APRRAMFVAAS-S 242 (271)
Q Consensus 172 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~-------~~~~~~~~~~~~~v~~~~~-s~~~~~l~~~~-~ 242 (271)
.-+....+ ..+..+...+++..++..+..|.++...+.. ++-+..+. ..+.+..+.. .++...++... |
T Consensus 158 ~~i~L~~~-d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i~-~~~~lv~~~~~~~~~~i~~~t~~G 235 (276)
T 3no0_A 158 QGIKLEKN-DETSGLRIWNGEPYLLVITAKGRVKKISHEEIPKTNRGVKGTEVSG-TKDTLVDLIPIKEEVELLITTKNG 235 (276)
T ss_dssp ECCCCCTT-CCEEEEEEESSCSEEEEEETTSCEEEEEGGGSCCCCTTCCCEECCC-SSSCEEEEEEESSEEEEEEEETTS
T ss_pred EEEccCCC-CEEEEEEEeCCCCEEEEEeCCCcEEEeEHHHcccCCCCCcceEEEc-CCCcEEEEEEeCCCCEEEEEcCCC
Confidence 11222222 2355554445567888889999998887642 22233332 2333444433 33334444444 7
Q ss_pred eEEE--EcCCC
Q 024185 243 VLSF--WIPNP 251 (271)
Q Consensus 243 ~v~i--w~~~~ 251 (271)
.+.. ++.+.
T Consensus 236 ~~ir~~~~~~~ 246 (276)
T 3no0_A 236 KAFYDKINQKD 246 (276)
T ss_dssp CEEEEEEEGGG
T ss_pred eEEEeeeCHHH
Confidence 7666 66544
No 373
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=49.45 E-value=77 Score=26.36 Aligned_cols=59 Identities=10% Similarity=0.164 Sum_probs=36.7
Q ss_pred EEEEEecCCeEEEEeCC-CCC-----CCcceEEEecCCccceEEEEEcCCCcEEEEEecCCeEEE
Q 024185 104 VFAVAMEAGAIKLFDSR-SYD-----KGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYV 162 (271)
Q Consensus 104 ~l~~~~~d~~i~i~d~~-~~~-----~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~ 162 (271)
.++.|+.+|.|.-.-+. ... ...+....+.....+|..+.++++..+|++++.++.+++
T Consensus 423 V~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 423 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEEEE
Confidence 56778888877544332 211 111222333223578999999999999999998876554
No 374
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=46.38 E-value=90 Score=26.30 Aligned_cols=68 Identities=10% Similarity=0.033 Sum_probs=40.8
Q ss_pred eEEEEEcC--CCcEEEEEecCCeEEEEECCCC----eEEEEeecCCCCCcee-eEEECCCCCEEEEecCCCcEEE
Q 024185 139 VCDIKFSN--DGKSMLLTTTNNNIYVLDAYGG----EKRCGFSLEPSPNTNT-EATFTPDGQYVVSGSGDGTLHA 206 (271)
Q Consensus 139 v~~~~~s~--~~~~l~~~~~d~~i~~~d~~~~----~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~dg~i~i 206 (271)
.++++... +...++.|+.+|.|.-..+... .....+........|. .+.+++++.+|+.++.++.+++
T Consensus 402 lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 402 LTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp EEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred eEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 45555444 2345677888998765555322 1233343333223464 7999999999999887754443
No 375
>3c12_A FLGD, flagellar protein; HOOK capping, IG-like domain, FN-III domain, tudor-like domain, flagellar biogenesis, flagellum; 2.51A {Xanthomonas campestris PV}
Probab=44.78 E-value=54 Score=21.65 Aligned_cols=86 Identities=10% Similarity=0.018 Sum_probs=40.8
Q ss_pred eEEEEECCCCeEEEEeecCCCCCceeeEEECCC---CCEEEEecCCCcEEEEEcCCceeEEEecCCcceeEEEEEecCCc
Q 024185 159 NIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPD---GQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRA 235 (271)
Q Consensus 159 ~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~ 235 (271)
.|.|+| .+|+.++++...........+.|+.. |+.+.-|...=.+..-| ..++....-....+.|.++.+...+.
T Consensus 42 ~v~I~d-~~G~~V~t~~~~~~~aG~~~~~WDg~d~~G~~~~~G~Y~~~v~a~d-~~g~~~~~~~~~~~~V~~V~~~~g~~ 119 (138)
T 3c12_A 42 NFEITD-ANGTFVKQLSVPASAAGEVSFAWDGTDANGNRMAAGKYGITATQTD-TAGAKSKLATYVDAPVDSVTIGSDGL 119 (138)
T ss_dssp EEEEEC-SSCCEEEEEEEEESSSEEEEEEECSBCTTSCBCCSEEEEEEEEEEE-TTCCEEEECEEEEEEEEEEEEETTEE
T ss_pred EEEEEe-CCCCEEEEEEcCCcCCceEEEEECCcCCCCCCCCCceEEEEEEEEE-CCCCEEEEeeeEEEEEEEEEecCCeE
Confidence 467777 46777777653322233566777642 22222111111111222 23333322222356788898875554
Q ss_pred EEEEeC-CeEEE
Q 024185 236 MFVAAS-SVLSF 246 (271)
Q Consensus 236 ~l~~~~-~~v~i 246 (271)
+|-.++ +.+.+
T Consensus 120 ~L~l~~~~~v~~ 131 (138)
T 3c12_A 120 YLNLTGLGTSPL 131 (138)
T ss_dssp EEEETTTEEEET
T ss_pred EEEECCCcEEeH
Confidence 554444 44443
No 376
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=43.80 E-value=1.2e+02 Score=26.45 Aligned_cols=57 Identities=16% Similarity=0.169 Sum_probs=35.5
Q ss_pred EEEEEecCCeEE-EEECCCCe-------EEEEeecCCCCCceeeEEECCCCCEEEEecCCCcEEE
Q 024185 150 SMLLTTTNNNIY-VLDAYGGE-------KRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHA 206 (271)
Q Consensus 150 ~l~~~~~d~~i~-~~d~~~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i 206 (271)
.++.|+.+|.|. +.....+. .+..+.....+..|..+.++++.++|+.++.++.+++
T Consensus 431 VlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 431 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 466788888875 33222211 2223333334455889999999999999988775544
No 377
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=43.06 E-value=96 Score=25.81 Aligned_cols=57 Identities=14% Similarity=0.137 Sum_probs=34.8
Q ss_pred EEEEEecCCeEEEEECC-CCe-------EEEEeecCCCCCceeeEEECCCCCEEEEecCCCcEEE
Q 024185 150 SMLLTTTNNNIYVLDAY-GGE-------KRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHA 206 (271)
Q Consensus 150 ~l~~~~~d~~i~~~d~~-~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i 206 (271)
.++.|+.+|.|.-.-+. .+. .+..+.....+..|..+.++++..+|+.++.++.++|
T Consensus 423 V~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 423 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEEEE
Confidence 46678888876544332 221 1223333222245889999999999999998775553
No 378
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=42.59 E-value=1e+02 Score=22.89 Aligned_cols=144 Identities=13% Similarity=0.136 Sum_probs=74.3
Q ss_pred CEEEEEecCCeEEEEeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEecCCeEEEEEC---CC----CeEEEE-e
Q 024185 103 LVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDA---YG----GEKRCG-F 174 (271)
Q Consensus 103 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~---~~----~~~~~~-~ 174 (271)
...++.+.+|.|+--....... ....+... +.+..+........++..+..|.++-+.. .. |+.+.. +
T Consensus 3 ~v~v~lT~~G~iKr~~~~~~~~---~~~~lke~-D~l~~~~~~~t~~~ll~~T~~Gr~~~~~~~elp~~r~~G~~i~~~i 78 (256)
T 1zvt_A 3 PVTIVLSQMGWVRSAKGHDIDA---PGLNYKAG-DSFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSARGQGEPLTGKL 78 (256)
T ss_dssp EEEEEEETTSEEEEEESSCCCS---TTSCCCTT-CCEEEEEEEETTSCEEEEETTSEEEEECGGGSCCSSSCCEEGGGTC
T ss_pred CEEEEEeCCCEEEEeeCCcCCc---eeccCCCC-CEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCCCcCCCCeEeeeee
Confidence 3456667788887666543221 01123333 33444444444455666777888666543 22 222211 1
Q ss_pred ecCCCCCceeeEEECCCCCEEEEecCCCcEEEEEcCC-------ceeEEEecCCcceeEEEEEe--cCCcEEEEeC-CeE
Q 024185 175 SLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINT-------RNEVACWNGNIGVVACLKWA--PRRAMFVAAS-SVL 244 (271)
Q Consensus 175 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~-------~~~~~~~~~~~~~v~~~~~s--~~~~~l~~~~-~~v 244 (271)
....+ ..|.++....++.+++.++..|.++...+.. +.....+... ..+..+... ++..+++... |.+
T Consensus 79 ~L~~~-e~Iv~~~~~~~~~~lll~T~~G~~Kr~~~~e~~~~~r~G~~~i~L~~~-d~lv~~~~~~~~~~~i~l~T~~G~~ 156 (256)
T 1zvt_A 79 TLPPG-ATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAGKALITLPEN-AHVMPPVVIEDASDMLLAITQAGRM 156 (256)
T ss_dssp CCCTT-CCEEEEECCCTTCEEEEEBTTSEEEEEEGGGGCCCSTTCEECBCCCTT-CCBCCCEECCCTTCEEEEEETTSEE
T ss_pred cCCCC-CEEEEEEEeCCCCEEEEEeCCCeEEEeEHHHhcccCcCceEEEEECCC-CEEEEEEEecCCCCEEEEEcCCCeE
Confidence 11111 2365554334566788899999999988743 2222333322 334444444 3444544444 887
Q ss_pred EEEcCCCC
Q 024185 245 SFWIPNPS 252 (271)
Q Consensus 245 ~iw~~~~~ 252 (271)
..+....-
T Consensus 157 lrf~~~ei 164 (256)
T 1zvt_A 157 LMFPVSDL 164 (256)
T ss_dssp EEEEGGGS
T ss_pred EEEEHHHC
Confidence 77776543
No 379
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=40.28 E-value=1.2e+02 Score=23.14 Aligned_cols=149 Identities=11% Similarity=0.117 Sum_probs=74.8
Q ss_pred CCCCEEEEEecCCeEEEEeCCCCCCC-----cceEEEecCCccceEEEEEcCCCcEEEEEecCCeEEEEEC---CC----
Q 024185 100 QQGLVFAVAMEAGAIKLFDSRSYDKG-----PFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDA---YG---- 167 (271)
Q Consensus 100 ~~~~~l~~~~~d~~i~i~d~~~~~~~-----~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~---~~---- 167 (271)
|+...+++.+.+|.|+--.+.+.+.. ......+..+ +.+..+........++..+..|.++-+.. +.
T Consensus 1 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke~-D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~ 79 (307)
T 1zi0_A 1 TQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEE-DFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRG 79 (307)
T ss_dssp CCCEEEEEEETTSEEEEEECC---------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSS
T ss_pred CCCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCCC-CEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCC
Confidence 45677888999999988777653320 0111122222 34444444445556777777887665543 22
Q ss_pred --CeEEEE-eecCCCCCceeeEEE-C--CCCCEEEEecCCCcEEEEEcCC-------ceeEEEecCCcceeEEEEE-ecC
Q 024185 168 --GEKRCG-FSLEPSPNTNTEATF-T--PDGQYVVSGSGDGTLHAWNINT-------RNEVACWNGNIGVVACLKW-APR 233 (271)
Q Consensus 168 --~~~~~~-~~~~~~~~~v~~~~~-~--~~~~~l~~~~~dg~i~iwd~~~-------~~~~~~~~~~~~~v~~~~~-s~~ 233 (271)
|.++.. +..... ..|..+.. . +++.+++..+.+|.++--.+.. +.....+..+ ..+..+.. ..+
T Consensus 80 a~G~~i~~~l~l~~~-e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~~~ 157 (307)
T 1zi0_A 80 ARGRPIVNLLPLEQD-ERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTSGE 157 (307)
T ss_dssp SCCEEGGGTSCCCTT-CCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEECTT
T ss_pred CCCeEhhhccCCCCC-CEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-CEEEEEEEeCCC
Confidence 222221 111112 22544432 2 3466788999999999887642 1111223333 33444433 344
Q ss_pred CcEEEEeC-CeEEEEcCCC
Q 024185 234 RAMFVAAS-SVLSFWIPNP 251 (271)
Q Consensus 234 ~~~l~~~~-~~v~iw~~~~ 251 (271)
..+++..+ |.+..+....
T Consensus 158 ~~i~l~T~~G~~irf~~~~ 176 (307)
T 1zi0_A 158 DEVMLFSAEGKVVRFKESS 176 (307)
T ss_dssp CEEEEEETTSEEEEEEGGG
T ss_pred CEEEEECCCCcEEEEEHHH
Confidence 45555555 7766666543
No 380
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=37.81 E-value=1.2e+02 Score=26.40 Aligned_cols=59 Identities=8% Similarity=0.177 Sum_probs=36.3
Q ss_pred EEEEEecCCeEE-EEeCCCCCCC-----cceEEEecCCccceEEEEEcCCCcEEEEEecCCeEEE
Q 024185 104 VFAVAMEAGAIK-LFDSRSYDKG-----PFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYV 162 (271)
Q Consensus 104 ~l~~~~~d~~i~-i~d~~~~~~~-----~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~ 162 (271)
.++.|+.+|.|. +......... .+....+-....+|..+.++++.+.|++++.++.+++
T Consensus 431 VlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 431 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 566788888774 3332222110 1112223345578999999999999999998876655
No 381
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=37.25 E-value=1.1e+02 Score=26.53 Aligned_cols=58 Identities=12% Similarity=0.080 Sum_probs=36.4
Q ss_pred EEEEEecCCeEEEE-eCCCCCCCcceEEEecCCccceEEEEEcCCC--cEEEEEecCCeEEE
Q 024185 104 VFAVAMEAGAIKLF-DSRSYDKGPFDTFLVGGDTAEVCDIKFSNDG--KSMLLTTTNNNIYV 162 (271)
Q Consensus 104 ~l~~~~~d~~i~i~-d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~--~~l~~~~~d~~i~~ 162 (271)
.++.|+.+|.|.-. ....... .+.....-....+|..+.++++. .+|++++.++.+++
T Consensus 417 V~flGT~~G~l~Kvv~~~~~~~-~~ee~~~~~~~~pI~~l~l~~~~~~~~Lyv~s~~~V~~v 477 (663)
T 1olz_A 417 VMFVSTDRGALHKAISLEHAVH-IIEETQLFQDFEPVQTLLLSSKKGNRFVYAGSNSGVVQA 477 (663)
T ss_dssp EEEEEETTSEEEEEEECSSSEE-EEEEEECCTTCCCCCEEEECCSSSSCEEEEECSSCEEEE
T ss_pred EEEEEcCCcEEEEEEecCCCce-EEEEecccCCCCcceeeEeccCCCccEEEEEEcCeEEEE
Confidence 67788889987533 3332211 11122222344688899999987 88988887766555
No 382
>3ol2_B Plexin-B1; beta-propeller, signalling, extacellular, signaling protein; HET: NAG BMA; 2.99A {Homo sapiens}
Probab=37.06 E-value=1.3e+02 Score=25.22 Aligned_cols=59 Identities=15% Similarity=0.197 Sum_probs=38.8
Q ss_pred CEEEEEecCCeEEEEeCC-CCCCCcceEEEecCCccce-EEEEEcCCCcEEEEEecCCeEEE
Q 024185 103 LVFAVAMEAGAIKLFDSR-SYDKGPFDTFLVGGDTAEV-CDIKFSNDGKSMLLTTTNNNIYV 162 (271)
Q Consensus 103 ~~l~~~~~d~~i~i~d~~-~~~~~~~~~~~~~~~~~~v-~~~~~s~~~~~l~~~~~d~~i~~ 162 (271)
..+..|+.+|.|.-.-.. ......+....+ ....+| ..+.++++...|++++.++.+++
T Consensus 401 tV~FlGT~~G~l~Kv~~~~~~~~~~~ee~~v-~~~~pi~~~l~l~~~~~~Lyv~s~~~V~~v 461 (528)
T 3ol2_B 401 TIAFLGDSQGQLHRVYLGPGSDGHPYSTQSI-QQGSAVSRDLTFDGTFEHLYVMTQSTLLKV 461 (528)
T ss_dssp EEEEEEETTSEEEEEECSSSCCSCCSEEEES-STTSCCCSCCEECTTSSEEEEECSSCEEEE
T ss_pred EEEEEECCCCeEEEEEEcCCCCeeEEeeecc-CCCCcceeeEEEecCCCEEEEEeCCEEEEE
Confidence 456678889988644443 222222344444 345677 48999999999999988876665
No 383
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=36.16 E-value=1.2e+02 Score=25.86 Aligned_cols=59 Identities=10% Similarity=0.227 Sum_probs=36.3
Q ss_pred EEEEEecCCeEEEEeCCC-CCCC-cceEEEec--CCccceEEEEEcCCCcEEEEEecCCeEEE
Q 024185 104 VFAVAMEAGAIKLFDSRS-YDKG-PFDTFLVG--GDTAEVCDIKFSNDGKSMLLTTTNNNIYV 162 (271)
Q Consensus 104 ~l~~~~~d~~i~i~d~~~-~~~~-~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~d~~i~~ 162 (271)
.+..|+.+|.|.-.-... .... ......+. ....+|..+.++++...|++++.++.+++
T Consensus 382 VlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s~~~V~qV 444 (590)
T 3nvq_A 382 VLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQV 444 (590)
T ss_dssp EEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEECSSEEEEE
T ss_pred EEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEecceEEEc
Confidence 567788888876433322 2110 11122222 34568899999999999999887765555
No 384
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=35.09 E-value=1.7e+02 Score=24.96 Aligned_cols=58 Identities=10% Similarity=0.009 Sum_probs=34.7
Q ss_pred cEEEEEecCCeEEEEECCC-C----e-EEEEeecCCCCCceeeEEECCCCCEEEEecCCCcEEE
Q 024185 149 KSMLLTTTNNNIYVLDAYG-G----E-KRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHA 206 (271)
Q Consensus 149 ~~l~~~~~d~~i~~~d~~~-~----~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i 206 (271)
..++.|+.+|.|.-.-+.. + . .+..+.....+..|..+.++++...|+.++.++.+++
T Consensus 381 tVlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s~~~V~qV 444 (590)
T 3nvq_A 381 HVLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQV 444 (590)
T ss_dssp EEEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEECSSEEEEE
T ss_pred EEEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEecceEEEc
Confidence 3566788888876433322 2 1 1222322122345888999999999988877665544
No 385
>3d8d_A Amyloid beta A4 precursor protein-binding family 1; alpha-beta structure, phosphotyrosine binding domain; 2.20A {Homo sapiens} PDB: 3d8e_A 3d8f_A
Probab=34.80 E-value=51 Score=22.24 Aligned_cols=43 Identities=5% Similarity=-0.093 Sum_probs=30.9
Q ss_pred ccCceEEEEEecCcceeEEEecCCcceEEEcCCC-C--EEEEEecC
Q 024185 69 TTALEYGIFVLMLASFQGILRLRGRPTVAFDQQG-L--VFAVAMEA 111 (271)
Q Consensus 69 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~--~l~~~~~d 111 (271)
=.++++++.|..+...+..++-..+..++-..+. + -|+....+
T Consensus 61 v~~~tlrLvD~~tk~~L~~~pI~~I~f~~~gr~~~~~~dFAfv~rd 106 (148)
T 3d8d_A 61 LEDETLKLVEPQSQALLHAQPIISIRVWGVGRDSGRERDFAYVARD 106 (148)
T ss_dssp EETTEEEEECTTTCCEEEEEEGGGCCEEEECCCC--CCEEEEEEEC
T ss_pred EcCCeEEEecCCCCceEEEeeEEEEEEEeCCCCCCccccEEEEEec
Confidence 3577899999999988888888888777776655 2 35544434
No 386
>3osv_A Flagellar basal-BODY ROD modification protein FLG; FLGD, flagellum, P. aeruginosa, structural protein; 2.35A {Pseudomonas aeruginosa}
Probab=34.55 E-value=90 Score=20.56 Aligned_cols=89 Identities=12% Similarity=0.045 Sum_probs=42.4
Q ss_pred CCeEEEEECCCCeEEEEeecCCCCCceeeEEECC---CCCEEEEecCCCcEEEEEcCCceeEEEecCCcceeEEEEEecC
Q 024185 157 NNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTP---DGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPR 233 (271)
Q Consensus 157 d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~ 233 (271)
+-++.|+| .+++.++++...........+.|+. +|+.+..|.. ++++.-...++.+..-....+.|.++.+..+
T Consensus 38 ~v~v~I~d-~~G~~V~t~~~g~~~aG~~~f~WDG~d~~G~~~~~G~Y--~~~v~a~~~g~~~~~~~~~~~~V~sV~~~~~ 114 (138)
T 3osv_A 38 NVWVNVYD-DKGTVVNRINLGQQAAGSVSFMWDGKDSSGNIMPPGTY--KFEAQTSIDGKTYGLQTYLPANVDSVTLGQN 114 (138)
T ss_dssp EEEEEEEC-TTSCEEEEEEEEEECSEEEEEEECSBCTTSCBCCSEEE--EEEEEEEETTEEEEECEEEEEEEEEEEECC-
T ss_pred EEEEEEEc-CCCCEEEEEEcCCcCCceEEEEECCcCCCCCCCCCccE--EEEEEEEcCCeEEEEeEEEEEEEEEEEeCCC
Confidence 34677787 4677777765322222355677764 2333222211 2333222334443322223467889998765
Q ss_pred C-c-EEEEeC-CeEEEEc
Q 024185 234 R-A-MFVAAS-SVLSFWI 248 (271)
Q Consensus 234 ~-~-~l~~~~-~~v~iw~ 248 (271)
+ . +|-.++ +.+.+-+
T Consensus 115 gg~~~L~l~g~g~v~~~~ 132 (138)
T 3osv_A 115 GGELMLNLAGLGSIALSK 132 (138)
T ss_dssp --CEEEEETTTEEECGGG
T ss_pred CCeEEEEECCCcEEeHHH
Confidence 2 3 443434 4554433
No 387
>1zso_A Hypothetical protein; structural genomics, PSI, protein structure initiative, STRU genomics of pathogenic protozoa consortium, SGPP; 2.17A {Plasmodium falciparum} SCOP: b.166.1.1
Probab=33.57 E-value=1.2e+02 Score=20.92 Aligned_cols=40 Identities=8% Similarity=-0.045 Sum_probs=29.2
Q ss_pred eeEEEecCCcceEEEcCCCCEEEEEecCCeEEEEeCCCCC
Q 024185 84 FQGILRLRGRPTVAFDQQGLVFAVAMEAGAIKLFDSRSYD 123 (271)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~ 123 (271)
.+..+...+...+.|.|++.+.+.+...|...=.|+..++
T Consensus 103 ~i~~FDCRGlEp~eF~p~~~w~a~~~esG~f~dvDLse~e 142 (164)
T 1zso_A 103 DFASFECRGIELIDFFPSNNFIVEDTKGKLYYDVNLSDQN 142 (164)
T ss_dssp EEEEEEEESEEEEEECCCSCEEEEETTSCEEEEECCTTSC
T ss_pred EEEEEECCCeeeEEEecCCcEEEEECCCCcEEeeecCCCc
Confidence 5556666777779999999999998767744456666544
No 388
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=33.57 E-value=67 Score=27.07 Aligned_cols=60 Identities=18% Similarity=0.244 Sum_probs=36.9
Q ss_pred CEEEEEecCCeEEEEeCCCCCCC--cceEEEecCCccceE-EEEEcCCCcEEEEEecCCeEEE
Q 024185 103 LVFAVAMEAGAIKLFDSRSYDKG--PFDTFLVGGDTAEVC-DIKFSNDGKSMLLTTTNNNIYV 162 (271)
Q Consensus 103 ~~l~~~~~d~~i~i~d~~~~~~~--~~~~~~~~~~~~~v~-~~~~s~~~~~l~~~~~d~~i~~ 162 (271)
..++.|+.+|.|.-..+...... .+....+.....+|. .+.+++++.+|++++.++.+++
T Consensus 414 tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 414 SVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp EEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred EEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 45777888898765544332210 122333333345775 8999999999998887654444
No 389
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=27.24 E-value=2.2e+02 Score=22.23 Aligned_cols=101 Identities=13% Similarity=0.026 Sum_probs=48.6
Q ss_pred CEEEEEecCCeEEEEeCCC-CCCCcceEEEecCCccceEEEEEcC-CCcEEEEEecCC----eEEEEECCCCeEEEEeec
Q 024185 103 LVFAVAMEAGAIKLFDSRS-YDKGPFDTFLVGGDTAEVCDIKFSN-DGKSMLLTTTNN----NIYVLDAYGGEKRCGFSL 176 (271)
Q Consensus 103 ~~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~d~----~i~~~d~~~~~~~~~~~~ 176 (271)
..|.+++..| +.+++... ++. ............|.++++.| +...+.+++..| .|...+ ..++.-..+..
T Consensus 23 g~l~vgt~~G-l~~~~~~~~g~~--W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~-D~G~tW~~~~~ 98 (394)
T 3b7f_A 23 VMLLVATIKG-AWFLASDPARRT--WELRGPVFLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRSD-DGGGNWTEATR 98 (394)
T ss_dssp CEEEEEETTE-EEEEEECTTSCS--EEEEEEESTTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEES-STTSCCEECSB
T ss_pred CEEEEEecCc-eEEEECCCCCCC--ceECCccCCCCceEEEEECCCCCCeEEEEecCCCCCccEEEeC-CCCCCceECCc
Confidence 4677787766 55555433 221 11111112235799999998 334455555554 444432 22322122211
Q ss_pred C----C--------CCCceeeEEECCC--CCEEEEecCCCcEEEE
Q 024185 177 E----P--------SPNTNTEATFTPD--GQYVVSGSGDGTLHAW 207 (271)
Q Consensus 177 ~----~--------~~~~v~~~~~~~~--~~~l~~~~~dg~i~iw 207 (271)
. . ....|.+++++|. ...+..++..+.|...
T Consensus 99 ~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S 143 (394)
T 3b7f_A 99 PPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRS 143 (394)
T ss_dssp CCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEE
T ss_pred cccCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEE
Confidence 0 0 0113667888872 3455555555545443
No 390
>3oky_A Plexin-A2; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okt_A* 4gza_A
Probab=25.58 E-value=3.2e+02 Score=23.84 Aligned_cols=58 Identities=14% Similarity=0.127 Sum_probs=35.9
Q ss_pred cEEEEEecCCeEEEEECCC----CeEEEEeecCCCCCce-eeEEECCCCCEEEEecCCCcEEE
Q 024185 149 KSMLLTTTNNNIYVLDAYG----GEKRCGFSLEPSPNTN-TEATFTPDGQYVVSGSGDGTLHA 206 (271)
Q Consensus 149 ~~l~~~~~d~~i~~~d~~~----~~~~~~~~~~~~~~~v-~~~~~~~~~~~l~~~~~dg~i~i 206 (271)
..++.|+.+|.|.-.-+.. ...+..+........| ..+.++++..+|+.++..+.+++
T Consensus 413 tVlFLGT~~G~l~Kv~~~~~~~~~~~~ee~~v~~~~~pI~~~l~l~~~~~~Lyv~s~~~V~qv 475 (681)
T 3oky_A 413 SVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 475 (681)
T ss_dssp EEEEEEBTTSEEEEEECCCTTTCCEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred EEEEEECCCceEEEEEECCCCCceEEEEEeeeccCCCceeeeeEEcCCCCEEEEEecCEEEEE
Confidence 4567788899887544432 1223333332222335 68999999889998887766555
No 391
>3ol2_B Plexin-B1; beta-propeller, signalling, extacellular, signaling protein; HET: NAG BMA; 2.99A {Homo sapiens}
Probab=24.55 E-value=2.7e+02 Score=23.38 Aligned_cols=67 Identities=12% Similarity=0.110 Sum_probs=39.7
Q ss_pred eEEEEEcC-CC-cEEEEEecCCeEEEEECC-CC--eEEEEeecCCCCCce-eeEEECCCCCEEEEecCCCcEEE
Q 024185 139 VCDIKFSN-DG-KSMLLTTTNNNIYVLDAY-GG--EKRCGFSLEPSPNTN-TEATFTPDGQYVVSGSGDGTLHA 206 (271)
Q Consensus 139 v~~~~~s~-~~-~~l~~~~~d~~i~~~d~~-~~--~~~~~~~~~~~~~~v-~~~~~~~~~~~l~~~~~dg~i~i 206 (271)
.+.|+... ++ ..++.|+.+|.|.-.-+. ++ ..+..+... ....| ..+.++++..+|+.++..+.+++
T Consensus 389 lT~IaVd~~~g~tV~FlGT~~G~l~Kv~~~~~~~~~~~ee~~v~-~~~pi~~~l~l~~~~~~Lyv~s~~~V~~v 461 (528)
T 3ol2_B 389 LTAVAVTMEDGHTIAFLGDSQGQLHRVYLGPGSDGHPYSTQSIQ-QGSAVSRDLTFDGTFEHLYVMTQSTLLKV 461 (528)
T ss_dssp EEEEEEEEETTEEEEEEEETTSEEEEEECSSSCCSCCSEEEESS-TTSCCCSCCEECTTSSEEEEECSSCEEEE
T ss_pred eEEEEEEeecCeEEEEEECCCCeEEEEEEcCCCCeeEEeeeccC-CCCcceeeEEEecCCCEEEEEeCCEEEEE
Confidence 45555443 22 345678888987654443 22 122333332 22346 47899999999999988876554
No 392
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=22.93 E-value=2.3e+02 Score=20.91 Aligned_cols=105 Identities=10% Similarity=0.128 Sum_probs=58.3
Q ss_pred CCEEEEEecCCeEEEEeCCC---CCCC--cc-eEEEecCCccceEEEEEcCCCcEEEEEecCCeEEEEECCC-------C
Q 024185 102 GLVFAVAMEAGAIKLFDSRS---YDKG--PF-DTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYG-------G 168 (271)
Q Consensus 102 ~~~l~~~~~d~~i~i~d~~~---~~~~--~~-~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d~~~-------~ 168 (271)
...++..+..|.++-+.... .... +. ....+.. ...|.++....++.+++.++..|.++...+.. +
T Consensus 44 ~~~ll~~T~~Gr~~~~~~~elp~~r~~G~~i~~~i~L~~-~e~Iv~~~~~~~~~~lll~T~~G~~Kr~~~~e~~~~~r~G 122 (256)
T 1zvt_A 44 NQPVVFVDSTGRSYAIDPITLPSARGQGEPLTGKLTLPP-GATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAG 122 (256)
T ss_dssp TSCEEEEETTSEEEEECGGGSCCSSSCCEEGGGTCCCCT-TCCEEEEECCCTTCEEEEEBTTSEEEEEEGGGGCCCSTTC
T ss_pred CCEEEEEeCCCeEEEEEHHHCCCcCCCCeEeeeeecCCC-CCEEEEEEEeCCCCEEEEEeCCCeEEEeEHHHhcccCcCc
Confidence 33455566677766554322 1110 00 1112322 34566664334566788899999999988743 2
Q ss_pred eEEEEeecCCCCCceeeEEEC-CCCCEEEEecCCCcEEEEEcC
Q 024185 169 EKRCGFSLEPSPNTNTEATFT-PDGQYVVSGSGDGTLHAWNIN 210 (271)
Q Consensus 169 ~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~dg~i~iwd~~ 210 (271)
.....+... ..+..+... .++..++..+.+|.+..++..
T Consensus 123 ~~~i~L~~~---d~lv~~~~~~~~~~~i~l~T~~G~~lrf~~~ 162 (256)
T 1zvt_A 123 KALITLPEN---AHVMPPVVIEDASDMLLAITQAGRMLMFPVS 162 (256)
T ss_dssp EECBCCCTT---CCBCCCEECCCTTCEEEEEETTSEEEEEEGG
T ss_pred eEEEEECCC---CEEEEEEEecCCCCEEEEEcCCCeEEEEEHH
Confidence 333333321 224444454 345578888889988888874
No 393
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=22.63 E-value=2.9e+02 Score=21.86 Aligned_cols=150 Identities=13% Similarity=0.067 Sum_probs=0.0
Q ss_pred CCCCEEEEEecCCeEEE-----EeCCCCCCCcceEEEecCCccceEEEEEcCCCcEEEEEecCCeEEEEE---------C
Q 024185 100 QQGLVFAVAMEAGAIKL-----FDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLD---------A 165 (271)
Q Consensus 100 ~~~~~l~~~~~d~~i~i-----~d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~~~d---------~ 165 (271)
|+...+++.+.+|.|+- |......-.......++. .+.+..+........++..+..|.+.-+. .
T Consensus 5 ~~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lke-~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~~~r~ 83 (370)
T 3l6v_A 5 APEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTKE-EDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPEAGSN 83 (370)
T ss_dssp CCCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECSC-CCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTT
T ss_pred cCCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccCC-CCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcCCCcc
Q ss_pred CCCeEEEEeecCCCCCceeeEEEC---CCCCEEEEecCCCcEEEEEc-------CCceeEEEecCCcceeEEEEEecCCc
Q 024185 166 YGGEKRCGFSLEPSPNTNTEATFT---PDGQYVVSGSGDGTLHAWNI-------NTRNEVACWNGNIGVVACLKWAPRRA 235 (271)
Q Consensus 166 ~~~~~~~~~~~~~~~~~v~~~~~~---~~~~~l~~~~~dg~i~iwd~-------~~~~~~~~~~~~~~~v~~~~~s~~~~ 235 (271)
..|..+..+-.-.....|.++..- .++.+++.++..|.++...+ +.|.....+.....-|.......+..
T Consensus 84 a~G~~i~~ll~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~~d~lv~v~~~~~~~~ 163 (370)
T 3l6v_A 84 ARGRPIINWIPLESGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDEGDALVGVALTDGDRD 163 (370)
T ss_dssp SCCEEGGGSCCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCTTCCEEEEEEECSCCE
T ss_pred cCCcCHhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCCCCEEEEEEEeCCCce
Q ss_pred EEEEeC-CeEEEEcCC
Q 024185 236 MFVAAS-SVLSFWIPN 250 (271)
Q Consensus 236 ~l~~~~-~~v~iw~~~ 250 (271)
+++..+ |.+..+...
T Consensus 164 i~l~T~~G~~irf~~~ 179 (370)
T 3l6v_A 164 VLLFASNGKTVRFGES 179 (370)
T ss_dssp EEEEETTSEEEEEEGG
T ss_pred EEEEeCCCeEEEEEcc
No 394
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=22.03 E-value=2.7e+02 Score=21.28 Aligned_cols=156 Identities=11% Similarity=-0.008 Sum_probs=83.4
Q ss_pred EEeeecceeEEeeecceeeEEEEeeccceee--E-------EEEEcccccceEEeeEEec--CCchhhhhhhhhhccCce
Q 024185 5 VFALPITQALLFARQNIILILLESLCGIYQC--M-------IIEFFATSKGIRRGLFLSA--CLQLMIALCLVLLTTALE 73 (271)
Q Consensus 5 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~-------~~~~~~~~~~~v~~~~~s~--~~~~~~~~~l~s~~~dg~ 73 (271)
++.....+.+++.+..|.++.+....--.-. . .+. +...+..+..+.... +... ++..+..|.
T Consensus 52 ~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~~~G~~i~~~l~-l~~~e~i~~~~~~~~~~~~~~-----ll~~T~~G~ 125 (312)
T 1suu_A 52 ALCVNTHDYLFMISNEGKLYLINAYEIKDSSRASKGQNISELIN-LGDQEEILTIKNSKDLTDDAY-----LLLTTASGK 125 (312)
T ss_dssp EEEEETTCEEEEEETTSEEEEEEGGGSCC-------CBGGGTSC-CCTTCCEEEEEEESCCCTTCE-----EEEEETTSE
T ss_pred EEEECCCCEEEEEECCCeEEEEEHHHCCCCCccCCCcChhhccC-CCCCCEEEEEEEeccCCCCCE-----EEEEeCCCe
Confidence 4444556788888888888888764210000 0 000 222222333222221 2333 556688888
Q ss_pred EEEEEecCcc-------eeEEEecC-CcceEEEcCCCCEEEEEecCCeEEEEeCCCC----C-CCcceEEEecCCccceE
Q 024185 74 YGIFVLMLAS-------FQGILRLR-GRPTVAFDQQGLVFAVAMEAGAIKLFDSRSY----D-KGPFDTFLVGGDTAEVC 140 (271)
Q Consensus 74 i~iwd~~~~~-------~~~~~~~~-~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~----~-~~~~~~~~~~~~~~~v~ 140 (271)
++...+..-. ....+... ..-.+....++..++..+.+|....+....- + ........+.. ...+.
T Consensus 126 ~kr~~l~~~~~~r~~G~~~i~L~~~d~lv~~~~~~~~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~-~d~vv 204 (312)
T 1suu_A 126 IARFESTDFKAVKSRGVIVIKLNDKDFVTSAEIVFKDEKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKE-GDLFV 204 (312)
T ss_dssp EEEEEGGGGCC----CEECBCCCTTCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCT-TCCEE
T ss_pred EEEEEHHHhhccCCCcEEEEecCCCCEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCC-CCEEE
Confidence 8888764321 11112221 2222333344556888888999988876541 1 11122333432 34566
Q ss_pred EEEEcCCCcEEEEEecCCeEEEEECCC
Q 024185 141 DIKFSNDGKSMLLTTTNNNIYVLDAYG 167 (271)
Q Consensus 141 ~~~~s~~~~~l~~~~~d~~i~~~d~~~ 167 (271)
.+..-+++..+++.+..|..+..++..
T Consensus 205 ~~~~v~~~~~l~~vt~~G~~kr~~~~e 231 (312)
T 1suu_A 205 KVLSVKENPYLLIVSENGYGKRLNMSK 231 (312)
T ss_dssp EEEECTTCSEEEEEETTSEEEEEEGGG
T ss_pred EEEEECCCCeEEEEECCCceEEEEHHH
Confidence 665555566788889999999888743
No 395
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=21.16 E-value=3.9e+02 Score=22.83 Aligned_cols=43 Identities=14% Similarity=0.174 Sum_probs=26.9
Q ss_pred CCccceEEEEEcCC--CcEEEEEecCC----eEEEEECCCCeEEEEeec
Q 024185 134 GDTAEVCDIKFSND--GKSMLLTTTNN----NIYVLDAYGGEKRCGFSL 176 (271)
Q Consensus 134 ~~~~~v~~~~~s~~--~~~l~~~~~d~----~i~~~d~~~~~~~~~~~~ 176 (271)
+|...+..-.|.|+ |..++.+.+++ -..+.|.++++.+.....
T Consensus 361 gHGDa~hv~dldP~r~GlEv~~~~E~~~~~~G~~~~dA~tG~vlw~~~~ 409 (591)
T 2zux_A 361 GHGDALHTGDLDPGRPGLEVFQVHEDKNAKYGLSFRDAATGKILWGVYA 409 (591)
T ss_dssp CCCSCEEEECCCTTSSSCEEEEECCCTTSSCSEEEEETTTCCEEEEECC
T ss_pred CCCCeeEEeecCCCCCCcEEEEEecCCCCCCccEEEECCCCcEEEEcCC
Confidence 56677777777776 34566555531 344577788887766543
Done!