BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024191
(271 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2IU8|A Chain A, Chlamydia Trachomatis Lpxd With 25mm Udpglcnac (Complex I)
pdb|2IU8|B Chain B, Chlamydia Trachomatis Lpxd With 25mm Udpglcnac (Complex I)
pdb|2IU8|C Chain C, Chlamydia Trachomatis Lpxd With 25mm Udpglcnac (Complex I)
pdb|2IU9|A Chain A, Chlamydia Trachomatis Lpxd With 100mm Udpglcnac (complex
Ii)
pdb|2IU9|B Chain B, Chlamydia Trachomatis Lpxd With 100mm Udpglcnac (complex
Ii)
pdb|2IU9|C Chain C, Chlamydia Trachomatis Lpxd With 100mm Udpglcnac (complex
Ii)
pdb|2IUA|A Chain A, C. Trachomatis Lpxd
pdb|2IUA|B Chain B, C. Trachomatis Lpxd
pdb|2IUA|C Chain C, C. Trachomatis Lpxd
Length = 374
Score = 153 bits (387), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 97/243 (39%), Positives = 130/243 (53%), Gaps = 6/243 (2%)
Query: 20 FGRFCNLFSTKSDIESRQQFQKWHNGGGIFHQSACIDSTVLIEVGAIVHSKAVLGANVCI 79
F + LF T D F H + H +A I+ V IE A+V A +G+ I
Sbjct: 109 FQKCLELFITPVD----SGFPGIHPTA-VIHPTAIIEDHVCIEPYAVVCQHAHVGSACHI 163
Query: 80 GSGTVVGPAVTIGQSTNIGFNVALSNCI-IGDSCIIHNGVCIGQDGFGFFVDEHGNMLKK 138
GSG+V+G T+G+ + I V + + IG II G IG GFG+ G
Sbjct: 164 GSGSVIGAYSTVGEHSYIHPRVVIRERVSIGKRVIIQPGAVIGSCGFGYVTSAFGQHKHL 223
Query: 139 PQLLNARIGNHVEIGANSCIDRGSWRDTVIGDHSKIDNLVQIGHNVAIGKSCMLCGQVGI 198
L I + VEIGAN+ IDRG ++ +V+ + SKIDNLVQI H V +G+ M+ Q GI
Sbjct: 224 KHLGKVIIEDDVEIGANTTIDRGRFKHSVVREGSKIDNLVQIAHQVEVGQHSMIVAQAGI 283
Query: 199 AGSATIGDYVTLGGRVAVRDHVSIASKVRLAANSCVFKDITEPGDYGGFPAVPIHEWRRQ 258
AGS IG++V +GG+ + H+ IA V + A + V K IT PG YGG PA P E RQ
Sbjct: 284 AGSTKIGNHVIIGGQAGITGHICIADHVIMMAQTGVTKSITSPGIYGGAPARPYQEIHRQ 343
Query: 259 VAN 261
VA
Sbjct: 344 VAK 346
>pdb|3EH0|A Chain A, Crystal Structure Of Lpxd From Escherichia Coli
pdb|3EH0|B Chain B, Crystal Structure Of Lpxd From Escherichia Coli
pdb|3EH0|C Chain C, Crystal Structure Of Lpxd From Escherichia Coli
Length = 341
Score = 140 bits (353), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 90/217 (41%), Positives = 121/217 (55%), Gaps = 9/217 (4%)
Query: 52 SACIDST------VLIEVGAIVHSKAVLGANVCIGSGTVVGPAVTIGQSTNIGFNVALSN 105
SA ID+T V I A++ S LG NV IG+G VG IG + + NV + +
Sbjct: 103 SAVIDATAKLGNNVSIGANAVIESGVELGDNVIIGAGCFVGKNSKIGAGSRLWANVTIYH 162
Query: 106 CI-IGDSCIIHNGVCIGQDGFGFFVDEHGNMLKKPQLLNARIGNHVEIGANSCIDRGSWR 164
I IG +C+I +G +G DGFG+ ++ GN +K PQ+ IG+ VEIGA + IDRG+
Sbjct: 163 EIQIGQNCLIQSGTVVGADGFGY-ANDRGNWVKIPQIGRVIIGDRVEIGACTTIDRGALD 221
Query: 165 DTVIGDHSKIDNLVQIGHNVAIGKSCMLCGQVGIAGSATIGDYVTLGGRVAVRDHVSIAS 224
DT+IG+ IDN QI HNV IG + + G V +AGS IG Y +GG + H+ I
Sbjct: 222 DTIIGNGVIIDNQCQIAHNVVIGDNTAVAGGVIMAGSLKIGRYCMIGGASVINGHMEICD 281
Query: 225 KVRLAANSCVFKDITEPGDY-GGFPAVPIHEWRRQVA 260
KV + V + ITEPG Y G P P WR+ A
Sbjct: 282 KVTVTGMGMVMRPITEPGVYSSGIPLQPNKVWRKTAA 318
Score = 29.6 bits (65), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 15/123 (12%)
Query: 116 NGVCIGQDGFGFFVDEHGNMLKKPQLLNARIGNHVEIGANSCIDRGSWRDTVIGDHSKID 175
+ V + QD F ++K P L AR+ +D I + ID
Sbjct: 57 SAVVMTQDDLPF-AKSAALVVKNPYLTYARMA--------QILDTTPQPAQNIAPSAVID 107
Query: 176 NLVQIGHNVAIGKSCMLCGQVGIAGSATIGDYVTLGGRVAVRDHVSIASKVRLAANSCVF 235
++G+NV+IG + + I +GD V +G V + I + RL AN ++
Sbjct: 108 ATAKLGNNVSIGANAV------IESGVELGDNVIIGAGCFVGKNSKIGAGSRLWANVTIY 161
Query: 236 KDI 238
+I
Sbjct: 162 HEI 164
>pdb|3PMO|A Chain A, The Structure Of Lpxd From Pseudomonas Aeruginosa At 1.3 A
Resolution
Length = 372
Score = 126 bits (316), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/215 (38%), Positives = 115/215 (53%), Gaps = 3/215 (1%)
Query: 48 IFHQSACIDSTVLIEVGAIVHSKAVLGANVCIGSGTVVGPAVTIGQSTNIGFNVAL-SNC 106
I A +D + + A++ S A +GA V IG+ V+G IG+ + V L +
Sbjct: 127 IVAADAEVDPSASVGAYAVIESGARIGAGVSIGAHCVIGARSVIGEGGWLAPRVTLYHDV 186
Query: 107 IIGDSCIIHNGVCIGQDGFGFFVDEHGNMLKKPQLLNARIGNHVEIGANSCIDRGSWRDT 166
IG I +G IG +GFGF +E G K Q+ IG+ VEIGAN+ IDRG+ DT
Sbjct: 187 TIGARVSIQSGAVIGGEGFGF-ANEKGVWQKIAQIGGVTIGDDVEIGANTTIDRGALSDT 245
Query: 167 VIGDHSKIDNLVQIGHNVAIGKSCMLCGQVGIAGSATIGDYVTLGGRVAVRDHVSIASKV 226
+IG+ K+DN + I HNV IG + VGI+GSA IG + L G V + H+ I V
Sbjct: 246 LIGNGVKLDNQIMIAHNVQIGDHTAMAACVGISGSAKIGRHCMLAGGVGLVGHIEICDNV 305
Query: 227 RLAANSCVFKDITEPGDYGGFPAV-PIHEWRRQVA 260
+ + V + ITEPG Y A+ P EW++ A
Sbjct: 306 FVTGMTMVTRSITEPGSYSSGTAMQPAAEWKKSAA 340
>pdb|4E75|A Chain A, Structure Of Lpxd From Acinetobacter Baumannii At 2.85a
Resolution (p21 Form)
pdb|4E75|B Chain B, Structure Of Lpxd From Acinetobacter Baumannii At 2.85a
Resolution (p21 Form)
pdb|4E75|C Chain C, Structure Of Lpxd From Acinetobacter Baumannii At 2.85a
Resolution (p21 Form)
pdb|4E75|D Chain D, Structure Of Lpxd From Acinetobacter Baumannii At 2.85a
Resolution (p21 Form)
pdb|4E75|E Chain E, Structure Of Lpxd From Acinetobacter Baumannii At 2.85a
Resolution (p21 Form)
pdb|4E75|F Chain F, Structure Of Lpxd From Acinetobacter Baumannii At 2.85a
Resolution (p21 Form)
pdb|4E79|A Chain A, Structure Of Lpxd From Acinetobacter Baumannii At 2.66a
Resolution (p4322 Form)
pdb|4E79|B Chain B, Structure Of Lpxd From Acinetobacter Baumannii At 2.66a
Resolution (p4322 Form)
pdb|4E79|C Chain C, Structure Of Lpxd From Acinetobacter Baumannii At 2.66a
Resolution (p4322 Form)
Length = 357
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/222 (36%), Positives = 108/222 (48%), Gaps = 15/222 (6%)
Query: 52 SACIDSTVLIEVGAIVHSKAVLGANVCIGSGTVVGPAVTIGQSTNIGFNVAL-SNCIIG- 109
S I+ST I A++ A +G V IG VVG I T + NV + +C I
Sbjct: 102 STGIESTARIHPSAVISETAYIGHYVVIGENCVVGDNTVIQSHTKLDDNVEVGKDCFIDS 161
Query: 110 -----------DSCIIHNGVCIGQDGFGFFVDEHGNMLKKPQLLNARIGNHVEIGANSCI 158
D IH+ IG +GFGF G + QL + IGN V IG+N I
Sbjct: 162 YVTITGSSKLRDRVRIHSSTVIGGEGFGF-APYQGKWHRIAQLGSVLIGNDVRIGSNCSI 220
Query: 159 DRGSWRDTVIGDHSKIDNLVQIGHNVAIGKSCMLCGQVGIAGSATIGDYVTLGGRVAVRD 218
DRG+ +T++ D IDNLVQI HNV IG + + + GIAGS IG L G V
Sbjct: 221 DRGALDNTILEDGVIIDNLVQIAHNVHIGSNTAIAAKCGIAGSTKIGKNCILAGACGVAG 280
Query: 219 HVSIASKVRLAANSCVFKDITEPGDY-GGFPAVPIHEWRRQV 259
H+SIA V L S V K+I+E G Y G + W++ +
Sbjct: 281 HLSIADNVTLTGMSMVTKNISEAGTYSSGTGLFENNHWKKTI 322
>pdb|1J2Z|A Chain A, Crystal Structure Of Udp-n-acetylglucosamine
Acyltransferase
Length = 270
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 81/185 (43%), Gaps = 26/185 (14%)
Query: 65 AIVHSKAVLGANVCIGSGTVVGPAVTIGQSTNIGFNVALSNCIIGDSCIIHNGVCIGQDG 124
AI+ KA + V IG V+G V + + + NV L H V +
Sbjct: 8 AIISPKAEINKGVEIGEFCVIGDGVKLDEGVKLHNNVTLQG---------HTFVGKNTEI 58
Query: 125 FGFFVDEHGNMLKKPQLLNARIGNHVE--IGANSCI---------DRGSWRDTVIGDHSK 173
F F V + +PQ L + G + E IG ++ I G + T+IGD +
Sbjct: 59 FPFAV-----LGTQPQDLKYK-GEYSELIIGEDNLIREFCMINPGTEGGIKKTLIGDKNL 112
Query: 174 IDNLVQIGHNVAIGKSCMLCGQVGIAGSATIGDYVTLGGRVAVRDHVSIASKVRLAANSC 233
+ V + H+ IG C+L V +AG IGDYV +GG A+ V IA +A S
Sbjct: 113 LMAYVHVAHDCVIGSHCILANGVTLAGHIEIGDYVNIGGLTAIHQFVRIAKGCMIAGKSA 172
Query: 234 VFKDI 238
+ KD+
Sbjct: 173 LGKDV 177
>pdb|4E6T|A Chain A, Structure Of Lpxa From Acinetobacter Baumannii At 1.8a
Resolution (P212121 Form)
pdb|4E6T|B Chain B, Structure Of Lpxa From Acinetobacter Baumannii At 1.8a
Resolution (P212121 Form)
pdb|4E6T|C Chain C, Structure Of Lpxa From Acinetobacter Baumannii At 1.8a
Resolution (P212121 Form)
Length = 294
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 91/209 (43%), Gaps = 18/209 (8%)
Query: 48 IFHQSACIDSTVLIEVGAIVHSKAVLGANVCIGSGTVVGPAVTIGQSTNIGFNVALSNCI 107
++ Q A + LI AI+ AV+ ++V IG ++GP VTIG T + +V +
Sbjct: 26 LYFQGAGTSNHDLIHSTAIIDPSAVIASDVQIGPYCIIGPQVTIGAGTKLHSHVVVGGFT 85
Query: 108 -IGDSCIIHNGVCIG---QDGFGFFVDEHGNMLKKPQLLNARIGNHVEIGANSCIDRGSW 163
IG + I +G QD + K + IGN+ I + + RG+
Sbjct: 86 RIGQNNEIFQFASVGEVCQD-----------LKYKGEETWLEIGNNNLIREHCSLHRGTV 134
Query: 164 RD---TVIGDHSKIDNLVQIGHNVAIGKSCMLCGQVGIAGSATIGDYVTLGGRVAVRDHV 220
+D T IG H+ + I H+ +G + VG+AG IGD+V +GG +
Sbjct: 135 QDNALTKIGSHNLLMVNTHIAHDCIVGDHNIFANNVGVAGHVHIGDHVIVGGNSGIHQFC 194
Query: 221 SIASKVRLAANSCVFKDITEPGDYGGFPA 249
I S + S + KD+ G PA
Sbjct: 195 KIDSYSMIGGASLILKDVPAYVMASGNPA 223
>pdb|4EQY|A Chain A, Crystal Structure Of Acyl-[acyl-Carrier-Protein]--Udp-N-
Acetylglucosamine O-Acyltransferase From Burkholderia
Thailandensis
pdb|4EQY|B Chain B, Crystal Structure Of Acyl-[acyl-Carrier-Protein]--Udp-N-
Acetylglucosamine O-Acyltransferase From Burkholderia
Thailandensis
pdb|4EQY|C Chain C, Crystal Structure Of Acyl-[acyl-Carrier-Protein]--Udp-N-
Acetylglucosamine O-Acyltransferase From Burkholderia
Thailandensis
pdb|4EQY|E Chain E, Crystal Structure Of Acyl-[acyl-Carrier-Protein]--Udp-N-
Acetylglucosamine O-Acyltransferase From Burkholderia
Thailandensis
pdb|4EQY|F Chain F, Crystal Structure Of Acyl-[acyl-Carrier-Protein]--Udp-N-
Acetylglucosamine O-Acyltransferase From Burkholderia
Thailandensis
pdb|4EQY|G Chain G, Crystal Structure Of Acyl-[acyl-Carrier-Protein]--Udp-N-
Acetylglucosamine O-Acyltransferase From Burkholderia
Thailandensis
Length = 283
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 82/191 (42%), Gaps = 24/191 (12%)
Query: 55 IDSTVLIEVGAIVHSKAVLGANVCIGSGTVVGPAVTIGQSTNIGFNVALSNCIIGDSCII 114
I T +IE GA +H V +G +VG VTIG T IG + +I
Sbjct: 25 IHPTAIIEPGAQLHE------TVEVGPYAIVGSNVTIGARTTIGSH-----------SVI 67
Query: 115 HNGVCIGQDG-FGFFVDEHG---NMLKKPQLLNARIGNHVEIGANSCIDRGSWRD---TV 167
IG+D G + G +M K + IG+ I + I G+ +D T
Sbjct: 68 EGHTTIGEDNRIGHYASVGGRPQDMKYKDEPTRLVIGDRNTIREFTTIHTGTVQDAGVTT 127
Query: 168 IGDHSKIDNLVQIGHNVAIGKSCMLCGQVGIAGSATIGDYVTLGGRVAVRDHVSIASKVR 227
+GD + I V IGH+ +G +L +AG IGD+ +GG V +V I +
Sbjct: 128 LGDDNWIMAYVHIGHDCRVGSHVVLSSNAQMAGHVEIGDWAIVGGMSGVHQYVRIGAHSM 187
Query: 228 LAANSCVFKDI 238
L S + +DI
Sbjct: 188 LGGASALVQDI 198
>pdb|3T57|A Chain A, Activity And Crystal Structure Of Arabidopsis
Udp-N-Acetylglucosamine Acyltransferase
Length = 305
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 85/209 (40%), Gaps = 30/209 (14%)
Query: 56 DSTVLIEVGAIVHSKAVLGANVCIGSGTVVGPAVTIGQSTNIGFNVAL-------SNCII 108
DS VLI A+VH AV IG G VGP TIG S +G L N +
Sbjct: 5 DSEVLIHPSAVVHPNAV------IGKGVSVGPYCTIGSSVKLGNGCKLYPSSHVFGNTEL 58
Query: 109 GDSCIIHNGVCIGQD--GFGF-----FVDEHGNMLKKPQLLNAR--------IGNHVEIG 153
G+SC++ G +G + G+ F + H + K Q L + IGN+ EI
Sbjct: 59 GESCVLMTGAVVGDELPGYTFIGCNNIIGHHAVVGVKCQDLKYKHGDECFLCIGNNNEIR 118
Query: 154 ANSCIDRGSWRD--TVIGDHSKIDNLVQIGHNVAIGKSCMLCGQVGIAGSATIGDYVTLG 211
I R S TVIGD++ I I H+ IG + +AG + D
Sbjct: 119 EFCSIHRSSKPSDKTVIGDNNLIMGSCHIAHDCKIGDRNIFANNTLLAGHVVVEDNTHTA 178
Query: 212 GRVAVRDHVSIASKVRLAANSCVFKDITE 240
G V I S + S V +D+ +
Sbjct: 179 GASVVHQFCHIGSFAFIGGGSVVSQDVPK 207
>pdb|4E6U|A Chain A, Structure Of Lpxa From Acinetobacter Baumannii At 1.4a
Resolution (P63 Form)
Length = 265
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 85/197 (43%), Gaps = 18/197 (9%)
Query: 60 LIEVGAIVHSKAVLGANVCIGSGTVVGPAVTIGQSTNIGFNVALSNCIIGDSCIIHNGVC 119
LI AI+ AV+ ++V IG ++GP VTIG T + +V +
Sbjct: 9 LIHSTAIIDPSAVIASDVQIGPYCIIGPQVTIGAGTKLHSHVVVGGF-----------TR 57
Query: 120 IGQDGFGFFVDEHGNMLK----KPQLLNARIGNHVEIGANSCIDRGSWRD---TVIGDHS 172
IGQ+ F G + + K + IGN+ I + + RG+ +D T IG H+
Sbjct: 58 IGQNNEIFQFASVGEVCQDLKYKGEETWLEIGNNNLIREHCSLHRGTVQDNALTKIGSHN 117
Query: 173 KIDNLVQIGHNVAIGKSCMLCGQVGIAGSATIGDYVTLGGRVAVRDHVSIASKVRLAANS 232
+ I H+ +G + VG+AG IGD+V +GG + I S + S
Sbjct: 118 LLMVNTHIAHDCIVGDHNIFANNVGVAGHVHIGDHVIVGGNSGIHQFCKIDSYSMIGGAS 177
Query: 233 CVFKDITEPGDYGGFPA 249
+ KD+ G PA
Sbjct: 178 LILKDVPAYVMASGNPA 194
>pdb|2AQ9|A Chain A, Structure Of E. Coli Lpxa With A Bound Peptide That Is
Competitive With Acyl-Acp
pdb|2JF3|A Chain A, Nucleotide Substrate Binding By Udp-N-Acetylglucosamine
Acyltransferase
pdb|1LXA|A Chain A, Udp N-Acetylglucosamine Acyltransferase
pdb|2QIA|A Chain A, Structural Basis For The Acyl Chain Selectivity And
Mechanism Of Udp-N-Acetylglucosamine Acyltransferase
pdb|2QIV|X Chain X, Structural Basis For The Acyl Chain Selectivity And
Mechanism Of Udp-N-Acetylglucosamine Acyltransferase
Length = 262
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 89/191 (46%), Gaps = 18/191 (9%)
Query: 55 IDSTVLIEVGAIVHSKAVLGANVCIGSGTVVGPAVTIGQSTNIGFNVALS-NCIIGDSCI 113
ID + + AIV A +GAN IG +VGP V IG+ T + +V ++ + IG
Sbjct: 2 IDKSAFVHPTAIVEEGASIGANAHIGPFCIVGPHVEIGEGTVLKSHVVVNGHTKIGRDNE 61
Query: 114 IHNGVCIGQDGFGFFVDEHGNMLKKPQLLNARIGNHVEIGANSCIDRGSWRDTVIGDHSK 173
I+ IG+ V++ +P + IG+ I + I RG+ + G +K
Sbjct: 62 IYQFASIGE------VNQDLKYAGEPTRV--EIGDRNRIRESVTIHRGTVQG---GGLTK 110
Query: 174 I--DNLV----QIGHNVAIGKSCMLCGQVGIAGSATIGDYVTLGGRVAVRDHVSIASKVR 227
+ DNL+ I H+ +G C+L +AG ++ D+ +GG AV I + V
Sbjct: 111 VGSDNLLMINAHIAHDCTVGNRCILANNATLAGHVSVDDFAIIGGMTAVHQFCIIGAHVM 170
Query: 228 LAANSCVFKDI 238
+ S V +D+
Sbjct: 171 VGGCSGVAQDV 181
>pdb|2JF2|A Chain A, Nucleotide Substrate Binding By Udp-n-acetylglucosamine
Acyltransferase
Length = 264
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 90/193 (46%), Gaps = 18/193 (9%)
Query: 53 ACIDSTVLIEVGAIVHSKAVLGANVCIGSGTVVGPAVTIGQSTNIGFNVALS-NCIIGDS 111
+ ID + + AIV A +GAN IG +VGP V IG+ T + +V ++ + IG
Sbjct: 2 SMIDKSAFVHPTAIVEEGASIGANAHIGPFCIVGPHVEIGEGTVLKSHVVVNGHTKIGRD 61
Query: 112 CIIHNGVCIGQDGFGFFVDEHGNMLKKPQLLNARIGNHVEIGANSCIDRGSWRDTVIGDH 171
I+ IG+ V++ +P + IG+ I + I RG+ + G
Sbjct: 62 NEIYQFASIGE------VNQDLKYAGEPTRV--EIGDRNRIRESVTIHRGTVQG---GGL 110
Query: 172 SKI--DNLV----QIGHNVAIGKSCMLCGQVGIAGSATIGDYVTLGGRVAVRDHVSIASK 225
+K+ DNL+ I H+ +G C+L +AG ++ D+ +GG AV I +
Sbjct: 111 TKVGSDNLLMINAHIAHDCTVGNRCILANNATLAGHVSVDDFAIIGGMTAVHQFCIIGAH 170
Query: 226 VRLAANSCVFKDI 238
V + S V +D+
Sbjct: 171 VMVGGCSGVAQDV 183
>pdb|3R0S|A Chain A, Udp-N-Acetylglucosamine Acyltransferase From Campylobacter
Jejuni
Length = 266
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 79/195 (40%), Gaps = 27/195 (13%)
Query: 47 GIFHQSACIDSTVLIEVGAIVHSKAVLGANVCIGSGTVVGPAVTIGQSTNIGFNVALSNC 106
+ + A + V+IE A V A +G NV I G + TIG + + S
Sbjct: 11 AVIEEGAQLGDDVVIEAYAYVSKDAKIGNNVVIKQGARILSDTTIGDHSRV-----FSYA 65
Query: 107 IIGDSCIIHNGVCIGQDGFGFFVDEHGNMLKKPQLLNARIGNHVEIGANSCIDRGSWRD- 165
I+GD I QD K+ Q IG + I + I+ G+ +
Sbjct: 66 IVGD---------IPQD----------ISYKEEQKSGVVIGKNATIREFATINSGTAKGD 106
Query: 166 --TVIGDHSKIDNLVQIGHNVAIGKSCMLCGQVGIAGSATIGDYVTLGGRVAVRDHVSIA 223
T IGD++ I I H+ +G + +L +AG +GD+ +GG + V +
Sbjct: 107 GFTRIGDNAFIXAYCHIAHDCLLGNNIILANNATLAGHVELGDFTVVGGLTPIHQFVKVG 166
Query: 224 SKVRLAANSCVFKDI 238
+A S + +DI
Sbjct: 167 EGCXIAGASALSQDI 181
>pdb|3HSQ|A Chain A, Structural Basis For The Sugar Nucleotide And Acyl Chain
Selectivity Of Leptospira Interrogans Lpxa
pdb|3HSQ|B Chain B, Structural Basis For The Sugar Nucleotide And Acyl Chain
Selectivity Of Leptospira Interrogans Lpxa
pdb|3HSQ|C Chain C, Structural Basis For The Sugar Nucleotide And Acyl Chain
Selectivity Of Leptospira Interrogans Lpxa
pdb|3I3A|A Chain A, Structural Basis For The Sugar Nucleotide And Acyl Chain
Selectivity Of Leptospira Interrogans Lpxa
pdb|3I3A|B Chain B, Structural Basis For The Sugar Nucleotide And Acyl Chain
Selectivity Of Leptospira Interrogans Lpxa
pdb|3I3A|C Chain C, Structural Basis For The Sugar Nucleotide And Acyl Chain
Selectivity Of Leptospira Interrogans Lpxa
pdb|3I3X|A Chain A, Structural Basis For The Sugar Nucleotide And Acyl Chain
Selectivity Of Leptospira Interrogans Lpxa
pdb|3I3X|B Chain B, Structural Basis For The Sugar Nucleotide And Acyl Chain
Selectivity Of Leptospira Interrogans Lpxa
pdb|3I3X|C Chain C, Structural Basis For The Sugar Nucleotide And Acyl Chain
Selectivity Of Leptospira Interrogans Lpxa
Length = 259
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 83/203 (40%), Gaps = 22/203 (10%)
Query: 50 HQSACIDSTVLIEVGAIVHSKAVLGANVCIGSGTVVGPAVTIGQSTNIG-FNVALSNCII 108
H +A ID + V +++ NV I GT++ V I + IG FN +I
Sbjct: 4 HPTAIIDPKAELHESVEVGPYSIIEGNVSIQEGTIIEGHVKICAGSEIGKFNRFHQGAVI 63
Query: 109 GDSCIIHNGVCIGQDGFGFFVDEHGNMLKKPQLLNARIGNHVEIGANSCIDRGSWRD--T 166
G + QD GF + L IG+H S I +G+ D T
Sbjct: 64 G---------VMPQD-LGF---------NQQLLTKTVIGDHNIFREYSNIHKGTKEDSPT 104
Query: 167 VIGDHSKIDNLVQIGHNVAIGKSCMLCGQVGIAGSATIGDYVTLGGRVAVRDHVSIASKV 226
VIG+ + +GH+ +G + +L +AG T+G++ + G VAV +
Sbjct: 105 VIGNKNYFMGNSHVGHDCILGNNNILTHGAVLAGHVTLGNFAFISGLVAVHQFCFVGDYS 164
Query: 227 RLAANSCVFKDITEPGDYGGFPA 249
+A + V +D+ G P+
Sbjct: 165 MVAGLAKVVQDVPPYSTVDGNPS 187
>pdb|3FS8|A Chain A, Crystal Structure Of Qdtc, The Dtdp-3-Amino-3,6-Dideoxy-D-
Glucose N-Acetyl Transferase From Thermoanaerobacterium
Thermosaccharolyticum In Complex With Acetyl-Coa
pdb|3FS8|B Chain B, Crystal Structure Of Qdtc, The Dtdp-3-Amino-3,6-Dideoxy-D-
Glucose N-Acetyl Transferase From Thermoanaerobacterium
Thermosaccharolyticum In Complex With Acetyl-Coa
pdb|3FSB|A Chain A, Crystal Structure Of Qdtc, The Dtdp-3-Amino-3,6-Dideoxy-D-
Glucose N-Acetyl Transferase From Thermoanaerobacterium
Thermosaccharolyticum In Complex With Coa And
Dtdp-3-Amino- Quinovose
pdb|3FSB|B Chain B, Crystal Structure Of Qdtc, The Dtdp-3-Amino-3,6-Dideoxy-D-
Glucose N-Acetyl Transferase From Thermoanaerobacterium
Thermosaccharolyticum In Complex With Coa And
Dtdp-3-Amino- Quinovose
pdb|3FSC|A Chain A, Crystal Structure Of Qdtc, The Dtdp-3-Amino-3,6-Dideoxy-D-
Glucose N-Acetyl Transferase From Thermoanaerobacterium
Thermosaccharolyticum In Complex With Coa And
Dtdp-3-Amino- Fucose
pdb|3FSC|B Chain B, Crystal Structure Of Qdtc, The Dtdp-3-Amino-3,6-Dideoxy-D-
Glucose N-Acetyl Transferase From Thermoanaerobacterium
Thermosaccharolyticum In Complex With Coa And
Dtdp-3-Amino- Fucose
Length = 273
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 71/168 (42%), Gaps = 9/168 (5%)
Query: 79 IGSGTVVGPAVTIGQSTNIGFNVALS-NCIIGDSCIIHNGVCIGQDGF--GFFVDEHGNM 135
I ++ V IG++ I NV + CII D+ I G IG + VD + +
Sbjct: 5 ISKSAIIKEGVIIGENVTIEDNVYIDYGCIIRDNVHIKKGSFIGARSILGEYLVDFYNDR 64
Query: 136 LKKPQLLNARIGNHVEIGANSCIDRGSWRDTVIGDHSKIDNLVQIGHNVAIGKSCMLCGQ 195
+ K L IG + I + I + DT+IGD+ + + V I N IG + +
Sbjct: 65 INKKHPL--IIGENALIRTENVI----YGDTIIGDNFQTGHKVTIRENTKIGNNVKIGTL 118
Query: 196 VGIAGSATIGDYVTLGGRVAVRDHVSIASKVRLAANSCVFKDITEPGD 243
I IG+YV + V V + I V L + + D T P +
Sbjct: 119 SDIQHHVYIGNYVNIHSNVFVGEKSIIKDFVWLFPHVVLTNDPTPPSN 166
>pdb|4AA7|A Chain A, E.Coli Glmu In Complex With An Antibacterial Inhibitor
pdb|4AA7|B Chain B, E.Coli Glmu In Complex With An Antibacterial Inhibitor
Length = 231
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 79/196 (40%), Gaps = 15/196 (7%)
Query: 74 GANVCIGSGTVVGPAVTIGQSTNIGFNVALSNCIIGDSCIIHNGVCIGQDGFGF--FVDE 131
G +V I + ++ VT+G IG + N +IGD C I + +
Sbjct: 44 GRDVEIDTNVIIEGNVTLGHRVKIGTGCVIKNSVIGDDCEISPYTVVEDANLAAACTIGP 103
Query: 132 HGNMLKKPQLLN-ARIGNHVEIGANSCIDRGSWRD--TVIGDHSKIDNLVQIGHNVAIGK 188
+ +LL A +GN VE+ + + +GS T +GD +IG NV IG
Sbjct: 104 FARLRPGAELLEGAHVGNFVEM-KKARLGKGSKAGHLTYLGD-------AEIGDNVNIGA 155
Query: 189 SCMLCGQVGIAGSAT-IGDYVTLGGRVAVRDHVSIASKVRLAANSCVFKDITEPG-DYGG 246
+ C G T IGD V +G + V++ +AA + V +++ E
Sbjct: 156 GTITCNYDGANKFKTIIGDDVFVGSDTQLVAPVTVGKGATIAAGTTVTRNVGENALAISR 215
Query: 247 FPAVPIHEWRRQVANQ 262
P WRR V +
Sbjct: 216 VPQTQKEGWRRPVKKK 231
>pdb|1HV9|A Chain A, Structure Of E. Coli Glmu: Analysis Of Pyrophosphorylase
And Acetyltransferase Active Sites
pdb|1HV9|B Chain B, Structure Of E. Coli Glmu: Analysis Of Pyrophosphorylase
And Acetyltransferase Active Sites
pdb|2OI5|A Chain A, E. Coli Glmu- Complex With Udp-Glcnac And Acetyl-Coa
pdb|2OI5|B Chain B, E. Coli Glmu- Complex With Udp-Glcnac And Acetyl-Coa
pdb|2OI6|A Chain A, E. Coli Glmu- Complex With Udp-Glcnac, Coa And Glcn-1-Po4
pdb|2OI6|B Chain B, E. Coli Glmu- Complex With Udp-Glcnac, Coa And Glcn-1-Po4
pdb|2OI7|A Chain A, E. Coli Glmu- Complex With Udp-Glcnac, Desulpho-Coa And
Glcnac-1-Po4
pdb|2OI7|B Chain B, E. Coli Glmu- Complex With Udp-Glcnac, Desulpho-Coa And
Glcnac-1-Po4
Length = 456
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 79/196 (40%), Gaps = 15/196 (7%)
Query: 74 GANVCIGSGTVVGPAVTIGQSTNIGFNVALSNCIIGDSCIIHNGVCIGQDGFGF--FVDE 131
G +V I + ++ VT+G IG + N +IGD C I + +
Sbjct: 269 GRDVEIDTNVIIEGNVTLGHRVKIGTGCVIKNSVIGDDCEISPYTVVEDANLAAACTIGP 328
Query: 132 HGNMLKKPQLLN-ARIGNHVEIGANSCIDRGSWRD--TVIGDHSKIDNLVQIGHNVAIGK 188
+ +LL A +GN VE+ + + +GS T +GD +IG NV IG
Sbjct: 329 FARLRPGAELLEGAHVGNFVEM-KKARLGKGSKAGHLTYLGD-------AEIGDNVNIGA 380
Query: 189 SCMLCGQVGIAGSAT-IGDYVTLGGRVAVRDHVSIASKVRLAANSCVFKDITEPG-DYGG 246
+ C G T IGD V +G + V++ +AA + V +++ E
Sbjct: 381 GTITCNYDGANKFKTIIGDDVFVGSDTQLVAPVTVGKGATIAAGTTVTRNVGENALAISR 440
Query: 247 FPAVPIHEWRRQVANQ 262
P WRR V +
Sbjct: 441 VPQTQKEGWRRPVKKK 456
>pdb|3TWD|A Chain A, Glmuc1 In Complex With An Antibacterial Inhibitor
pdb|3TWD|B Chain B, Glmuc1 In Complex With An Antibacterial Inhibitor
Length = 222
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 77/191 (40%), Gaps = 15/191 (7%)
Query: 74 GANVCIGSGTVVGPAVTIGQSTNIGFNVALSNCIIGDSCIIHNGVCIGQDGFGF--FVDE 131
G +V I + ++ VT+G IG + N +IGD C I + +
Sbjct: 38 GRDVEIDTNVIIEGNVTLGHRVKIGTGCVIKNSVIGDDCEISPYTVVEDANLAAACTIGP 97
Query: 132 HGNMLKKPQLLN-ARIGNHVEIGANSCIDRGSWRD--TVIGDHSKIDNLVQIGHNVAIGK 188
+ +LL A +GN VE+ + + +GS T +GD +IG NV IG
Sbjct: 98 FARLRPGAELLEGAHVGNFVEM-KKARLGKGSKAGHLTYLGD-------AEIGDNVNIGA 149
Query: 189 SCMLCGQVGIAGSAT-IGDYVTLGGRVAVRDHVSIASKVRLAANSCVFKDITEPG-DYGG 246
+ C G T IGD V +G + V++ +AA + V +++ E
Sbjct: 150 GTITCNYDGANKFKTIIGDDVFVGSDTQLVAPVTVGKGATIAAGTTVTRNVGENALAISR 209
Query: 247 FPAVPIHEWRR 257
P WRR
Sbjct: 210 VPQTQKEGWRR 220
>pdb|4EA7|A Chain A, X-Ray Crystal Structure Of Perb From Caulobacter
Crescentus In Complex With Coa And Gdp-Perosamine At 1.0
Angstrom Resolution
pdb|4EA8|A Chain A, X-Ray Crystal Structure Of Perb From Caulobacter
Crescentus In Complex With Coenzyme A And
Gdp-N-Acetylperosamine At 1 Angstrom Resolution
pdb|4EA9|A Chain A, X-Ray Structure Of Gdp-Perosamine N-Acetyltransferase In
Complex With Transition State Analog At 0.9 Angstrom
Resolution
Length = 220
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 55/126 (43%), Gaps = 7/126 (5%)
Query: 124 GFGFFVDEHGNMLKKPQLLNARIGNHVEIGANSCIDRGSWRDTVIGDHSKIDNLVQIGHN 183
GF H + + P + R+G V + A I+ SW IGD + I+ + H+
Sbjct: 95 GFSLVNAIHPSAVVSPSV---RLGEGVAVMAGVAINADSW----IGDLAIINTGAVVDHD 147
Query: 184 VAIGKSCMLCGQVGIAGSATIGDYVTLGGRVAVRDHVSIASKVRLAANSCVFKDITEPGD 243
+G +C L +AG ++G+ LG V V+I + + A V +D+ +
Sbjct: 148 CRLGAACHLGPASALAGGVSVGERAFLGVGARVIPGVTIGADTIVGAGGVVVRDLPDSVL 207
Query: 244 YGGFPA 249
G PA
Sbjct: 208 AIGVPA 213
>pdb|3FOQ|A Chain A, Crystal Structure Of N-Acetylglucosamine-1-Phosphate
Uridyltransferase (Glmu) From Mycobacterium Tuberculosis
In A Cubic Space Group
Length = 503
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 69/193 (35%), Gaps = 49/193 (25%)
Query: 55 IDSTVLIEVGAIVHSKAVLGANVCIGSGTVVGPAVTI---------------GQSTNIGF 99
ID V I ++H L IG VVGP T+ G S++IG
Sbjct: 282 IDVDVTIGRDTVIHPGTQLLGRTQIGGRCVVGPDTTLTDVAVGDGASVVRTHGSSSSIGD 341
Query: 100 NVALSNCIIGDSCIIHNGVCIGQDG-FGFFVDEH----GNMLKKPQLL---NARIGNHVE 151
A +G + G +G DG G FV+ G K P L +A IG +
Sbjct: 342 GAA-----VGPFTYLRPGTALGADGKLGAFVEVKNSTIGTGTKVPHLTYVGDADIGEYSN 396
Query: 152 IGANSCI---DRGSWRDTVIGDHSKIDNLVQIGHNVAIGKSCMLCGQVGIAGSATIGDYV 208
IGA+S D S R T +G H V G M V TIGD
Sbjct: 397 IGASSVFVNYDGTSKRRTTVGSH------------VRTGSDTMFVAPV------TIGDGA 438
Query: 209 TLGGRVAVRDHVS 221
G VR+ V
Sbjct: 439 YTGAGTVVREDVP 451
>pdb|3SPT|A Chain A, Crystal Structure Of Glmu From Mycobacterium Tuberculosis
In Complex With Acetyl Coenzyme A And
Uridine-Diphosphate-N-Acetylglucosamine
pdb|3ST8|A Chain A, Crystal Structure Of Glmu From Mycobacterium Tuberculosis
In Complex With Coenzyme A, Glucosamine 1-Phosphate And
Uridine-Diphosphate-N- Acetylglucosamine
Length = 501
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 69/193 (35%), Gaps = 49/193 (25%)
Query: 55 IDSTVLIEVGAIVHSKAVLGANVCIGSGTVVGPAVTI---------------GQSTNIGF 99
ID V I ++H L IG VVGP T+ G S++IG
Sbjct: 280 IDVDVTIGRDTVIHPGTQLLGRTQIGGRCVVGPDTTLTDVAVGDGASVVRTHGSSSSIGD 339
Query: 100 NVALSNCIIGDSCIIHNGVCIGQDG-FGFFVDEH----GNMLKKPQLL---NARIGNHVE 151
A +G + G +G DG G FV+ G K P L +A IG +
Sbjct: 340 GAA-----VGPFTYLRPGTALGADGKLGAFVEVKNSTIGTGTKVPHLTYVGDADIGEYSN 394
Query: 152 IGANSCI---DRGSWRDTVIGDHSKIDNLVQIGHNVAIGKSCMLCGQVGIAGSATIGDYV 208
IGA+S D S R T +G H V G M V TIGD
Sbjct: 395 IGASSVFVNYDGTSKRRTTVGSH------------VRTGSDTMFVAPV------TIGDGA 436
Query: 209 TLGGRVAVRDHVS 221
G VR+ V
Sbjct: 437 YTGAGTVVREDVP 449
>pdb|3D8V|A Chain A, Crystal Structure Of Glmu From Mycobacterium Tuberculosis
In Complex With Uridine-Diphosphate-N-Acetylglucosamine
pdb|3D98|A Chain A, Crystal Structure Of Glmu From Mycobacterium Tuberculosis,
Ligand-Free Form
pdb|3DJ4|A Chain A, Crystal Structure Of Glmu From Mycobacterium Tuberculosis
In Complex With Uridine-Diphosphate-N-Acetylglucosamine.
pdb|3DK5|A Chain A, Crystal Structure Of Apo-Glmu From Mycobacterium
Tuberculosis
Length = 495
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 69/193 (35%), Gaps = 49/193 (25%)
Query: 55 IDSTVLIEVGAIVHSKAVLGANVCIGSGTVVGPAVTI---------------GQSTNIGF 99
ID V I ++H L IG VVGP T+ G S++IG
Sbjct: 274 IDVDVTIGRDTVIHPGTQLLGRTQIGGRCVVGPDTTLTDVAVGDGASVVRTHGSSSSIGD 333
Query: 100 NVALSNCIIGDSCIIHNGVCIGQDG-FGFFVDEH----GNMLKKPQLL---NARIGNHVE 151
A +G + G +G DG G FV+ G K P L +A IG +
Sbjct: 334 GAA-----VGPFTYLRPGTALGADGKLGAFVEVKNSTIGTGTKVPHLTYVGDADIGEYSN 388
Query: 152 IGANSCI---DRGSWRDTVIGDHSKIDNLVQIGHNVAIGKSCMLCGQVGIAGSATIGDYV 208
IGA+S D S R T +G H V G M V TIGD
Sbjct: 389 IGASSVFVNYDGTSKRRTTVGSH------------VRTGSDTMFVAPV------TIGDGA 430
Query: 209 TLGGRVAVRDHVS 221
G VR+ V
Sbjct: 431 YTGAGTVVREDVP 443
>pdb|2V0H|A Chain A, Characterization Of Substrate Binding And Catalysis Of The
Potential Antibacterial Target N-Acetylglucosamine-1-
Phosphate Uridyltransferase (Glmu)
pdb|2V0I|A Chain A, Characterization Of Substrate Binding And Catalysis Of The
Potential Antibacterial Target N-Acetylglucosamine-1-
Phosphate Uridyltransferase (Glmu)
pdb|2V0J|A Chain A, Characterization Of Substrate Binding And Catalysis Of The
Potential Antibacterial Target N-acetylglucosamine-1-
Phosphate Uridyltransferase (glmu)
pdb|2V0K|A Chain A, Characterization Of Substrate Binding And Catalysis Of The
Potential Antibacterial Target N-Acetylglucosamine-1-
Phosphate Uridyltransferase (Glmu)
pdb|2V0L|A Chain A, Characterization Of Substrate Binding And Catalysis Of The
Potential Antibacterial Target N-Acetylglucosamine-1-
Phosphate Uridyltransferase (Glmu)
pdb|2VD4|A Chain A, Structure Of Small-Molecule Inhibitor Of Glmu From
Haemophilus Influenzae Reveals An Allosteric Binding
Site
pdb|2W0V|A Chain A, Crystal Structure Of Glmu From Haemophilus Influenzae In
Complex With Quinazoline Inhibitor 1
pdb|2W0W|A Chain A, Crystal Structure Of Glmu From Haemophilus Influenzae In
Complex With Quinazoline Inhibitor 2
Length = 456
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 78/190 (41%), Gaps = 36/190 (18%)
Query: 59 VLIEVGAIVHSKAVLGANVCIGSGTVVGPAVTIGQSTNIGFNVALSNCIIGDSCIIHNGV 118
V I+V I+ LG V IG+G V+ V IG I L + I+G+ I
Sbjct: 272 VEIDVNVIIEGNVKLGDRVKIGTGCVL-KNVVIGNDVEIKPYSVLEDSIVGEKAAI---- 326
Query: 119 CIGQDGFGFFVDEHGNMLKKPQLLNAR--IGNHVEIGANSCIDRGSWRDTVIGDHSKIDN 176
G F + L+ L A +GN VEI + + +G SK+++
Sbjct: 327 -------GPF-----SRLRPGAELAAETHVGNFVEI-----------KKSTVGKGSKVNH 363
Query: 177 LV-----QIGHNVAIGKSCMLCGQVGIAGSATI-GDYVTLGGRVAVRDHVSIASKVRLAA 230
L +IG N IG + C G TI GD V +G + V +A+ + A
Sbjct: 364 LTYVGDSEIGSNCNIGAGVITCNYDGANKFKTIIGDDVFVGSDTQLVAPVKVANGATIGA 423
Query: 231 NSCVFKDITE 240
+ + +D+ E
Sbjct: 424 GTTITRDVGE 433
>pdb|4EAA|A Chain A, X-Ray Crystal Structure Of The H141n Mutant Of Perosamine
N- Acetyltransferase From Caulobacter Crescentus In
Complex With Coa And Gdp-Perosamine
Length = 220
Score = 36.2 bits (82), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 55/126 (43%), Gaps = 7/126 (5%)
Query: 124 GFGFFVDEHGNMLKKPQLLNARIGNHVEIGANSCIDRGSWRDTVIGDHSKIDNLVQIGHN 183
GF H + + P + R+G V + A I+ SW IGD + I+ + ++
Sbjct: 95 GFSLVNAIHPSAVVSPSV---RLGEGVAVMAGVAINADSW----IGDLAIINTGAVVDND 147
Query: 184 VAIGKSCMLCGQVGIAGSATIGDYVTLGGRVAVRDHVSIASKVRLAANSCVFKDITEPGD 243
+G +C L +AG ++G+ LG V V+I + + A V +D+ +
Sbjct: 148 CRLGAACHLGPASALAGGVSVGERAFLGVGARVIPGVTIGADTIVGAGGVVVRDLPDSVL 207
Query: 244 YGGFPA 249
G PA
Sbjct: 208 AIGVPA 213
>pdb|3CJ8|A Chain A, Crystal Structure Of
2,3,4,5-Tetrahydropyridine-2-Carboxylate N-
Succinyltransferase From Enterococcus Faecalis V583
pdb|3CJ8|B Chain B, Crystal Structure Of
2,3,4,5-Tetrahydropyridine-2-Carboxylate N-
Succinyltransferase From Enterococcus Faecalis V583
pdb|3CJ8|C Chain C, Crystal Structure Of
2,3,4,5-Tetrahydropyridine-2-Carboxylate N-
Succinyltransferase From Enterococcus Faecalis V583
Length = 236
Score = 35.8 bits (81), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Query: 46 GGIFHQSACIDSTVLIEVGAIVHSKAVLGANVCIGSGTVVGPAVTIGQSTNIGFNVALSN 105
G + + I +I GAI++ AV+GA I G V+G T+G+ +IG L+
Sbjct: 97 GALIREKVEIGDQAVIXXGAILNIGAVVGAGTXIDXGAVLGGRATVGKHCHIGAGTVLAG 156
Query: 106 CIIGDSC---IIHNGVCIGQDG 124
I S +I N V IG +
Sbjct: 157 VIEPPSAAPVVIENEVVIGANA 178
>pdb|4EAB|A Chain A, X-Ray Crystal Structure Of The H141a Mutant Of
Gdp-Perosamine N-Acetyl Transferase From Caulobacter
Crescentus In Complex With Coa And Gdp- Perosamine
Length = 220
Score = 35.4 bits (80), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 54/126 (42%), Gaps = 7/126 (5%)
Query: 124 GFGFFVDEHGNMLKKPQLLNARIGNHVEIGANSCIDRGSWRDTVIGDHSKIDNLVQIGHN 183
GF H + + P + R+G V + A I+ SW IGD + I+ + +
Sbjct: 95 GFSLVNAIHPSAVVSPSV---RLGEGVAVMAGVAINADSW----IGDLAIINTGAVVDAD 147
Query: 184 VAIGKSCMLCGQVGIAGSATIGDYVTLGGRVAVRDHVSIASKVRLAANSCVFKDITEPGD 243
+G +C L +AG ++G+ LG V V+I + + A V +D+ +
Sbjct: 148 CRLGAACHLGPASALAGGVSVGERAFLGVGARVIPGVTIGADTIVGAGGVVVRDLPDSVL 207
Query: 244 YGGFPA 249
G PA
Sbjct: 208 AIGVPA 213
>pdb|4FCE|A Chain A, Crystal Structure Of Yersinia Pestis Glmu In Comlex With
Alpha-D- Glucosamine 1-Phosphate (Gp1)
Length = 459
Score = 35.0 bits (79), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 71/173 (41%), Gaps = 14/173 (8%)
Query: 74 GANVCIGSGTVVGPAVTIGQSTNIGFNVALSNCIIGDSCIIHNGVCIGQDGFGF--FVDE 131
G ++ I + ++ V +G IG L NC+IGD I + V
Sbjct: 272 GRDITIDTNVIIEGHVILGDRVRIGTGCVLKNCVIGDDSEISPYTVLEDARLDANCTVGP 331
Query: 132 HGNMLKKPQLLN-ARIGNHVEIGANSCIDRGSWRD--TVIGDHSKIDNLVQIGHNVAIGK 188
+ +L A +GN VEI + + +GS + +GD +IG V IG
Sbjct: 332 FARLRPGAELAEGAHVGNFVEI-KKARLGKGSKAGHLSYLGD-------AEIGAGVNIGA 383
Query: 189 SCMLCGQVGIAGSAT-IGDYVTLGGRVAVRDHVSIASKVRLAANSCVFKDITE 240
+ C G T IGD V +G + V++A+ + A + V +D+ E
Sbjct: 384 GTITCNYDGANKFKTIIGDDVFVGSDTQLVAPVTVANGATIGAGTTVTRDVAE 436
>pdb|3FWW|A Chain A, The Crystal Structure Of The Bifunctional
N-Acetylglucosamine-1- Phosphate
UridyltransferaseGLUCOSAMINE-1-Phosphate
Acetyltransferase From Yersinia Pestis Co92
Length = 456
Score = 35.0 bits (79), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 71/173 (41%), Gaps = 14/173 (8%)
Query: 74 GANVCIGSGTVVGPAVTIGQSTNIGFNVALSNCIIGDSCIIHNGVCIGQDGFGF--FVDE 131
G ++ I + ++ V +G IG L NC+IGD I + V
Sbjct: 269 GRDITIDTNVIIEGHVILGDRVRIGTGCVLKNCVIGDDSEISPYTVLEDARLDANCTVGP 328
Query: 132 HGNMLKKPQLLN-ARIGNHVEIGANSCIDRGSWRD--TVIGDHSKIDNLVQIGHNVAIGK 188
+ +L A +GN VEI + + +GS + +GD +IG V IG
Sbjct: 329 FARLRPGAELAEGAHVGNFVEI-KKARLGKGSKAGHLSYLGD-------AEIGAGVNIGA 380
Query: 189 SCMLCGQVGIAGSAT-IGDYVTLGGRVAVRDHVSIASKVRLAANSCVFKDITE 240
+ C G T IGD V +G + V++A+ + A + V +D+ E
Sbjct: 381 GTITCNYDGANKFKTIIGDDVFVGSDTQLVAPVTVANGATIGAGTTVTRDVAE 433
>pdb|3MQG|A Chain A, Crystal Structure Of The 3-N-Acetyl Transferase Wlbb From
Bo Petrii In Complex With Acetyl-Coa
pdb|3MQG|B Chain B, Crystal Structure Of The 3-N-Acetyl Transferase Wlbb From
Bo Petrii In Complex With Acetyl-Coa
pdb|3MQG|C Chain C, Crystal Structure Of The 3-N-Acetyl Transferase Wlbb From
Bo Petrii In Complex With Acetyl-Coa
pdb|3MQG|D Chain D, Crystal Structure Of The 3-N-Acetyl Transferase Wlbb From
Bo Petrii In Complex With Acetyl-Coa
pdb|3MQG|E Chain E, Crystal Structure Of The 3-N-Acetyl Transferase Wlbb From
Bo Petrii In Complex With Acetyl-Coa
pdb|3MQG|F Chain F, Crystal Structure Of The 3-N-Acetyl Transferase Wlbb From
Bo Petrii In Complex With Acetyl-Coa
pdb|3MQH|A Chain A, Crystal Structure Of The 3-N-Acetyl Transferase Wlbb From
Bo Petrii In Complex With Coa And
Udp-3-Amino-2-Acetamido-2,3- Glucuronic Acid
pdb|3MQH|B Chain B, Crystal Structure Of The 3-N-Acetyl Transferase Wlbb From
Bo Petrii In Complex With Coa And
Udp-3-Amino-2-Acetamido-2,3- Glucuronic Acid
pdb|3MQH|C Chain C, Crystal Structure Of The 3-N-Acetyl Transferase Wlbb From
Bo Petrii In Complex With Coa And
Udp-3-Amino-2-Acetamido-2,3- Glucuronic Acid
pdb|3MQH|D Chain D, Crystal Structure Of The 3-N-Acetyl Transferase Wlbb From
Bo Petrii In Complex With Coa And
Udp-3-Amino-2-Acetamido-2,3- Glucuronic Acid
pdb|3MQH|E Chain E, Crystal Structure Of The 3-N-Acetyl Transferase Wlbb From
Bo Petrii In Complex With Coa And
Udp-3-Amino-2-Acetamido-2,3- Glucuronic Acid
pdb|3MQH|F Chain F, Crystal Structure Of The 3-N-Acetyl Transferase Wlbb From
Bo Petrii In Complex With Coa And
Udp-3-Amino-2-Acetamido-2,3- Glucuronic Acid
Length = 192
Score = 34.7 bits (78), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Query: 147 GNHVEIGANSCIDRGSWRDTVIGDHSKIDNLVQIGHNVAIGKSCMLCGQVGIAGSATIGD 206
G+ I + +D G+ IG HS+I + V I IG+ C L V + IG+
Sbjct: 1 GHMATIHPTAIVDEGA----RIGAHSRIWHWVHICGGAEIGEGCSLGQNVFVGNRVRIGN 56
Query: 207 YVTLGGRVAVRDHVSIASKVRLAANSCVFKDITEP 241
V + V+V D+V + V S VF ++ P
Sbjct: 57 RVKIQNNVSVYDNVFLEDDV-FCGPSMVFTNVYNP 90
>pdb|1KHR|A Chain A, Crystal Structure Of Vat(D) In Complex With Virginiamycin
And Coenzyme A
pdb|1KHR|B Chain B, Crystal Structure Of Vat(D) In Complex With Virginiamycin
And Coenzyme A
pdb|1KHR|C Chain C, Crystal Structure Of Vat(D) In Complex With Virginiamycin
And Coenzyme A
pdb|1KHR|D Chain D, Crystal Structure Of Vat(D) In Complex With Virginiamycin
And Coenzyme A
pdb|1KHR|E Chain E, Crystal Structure Of Vat(D) In Complex With Virginiamycin
And Coenzyme A
pdb|1KHR|F Chain F, Crystal Structure Of Vat(D) In Complex With Virginiamycin
And Coenzyme A
pdb|1KK4|A Chain A, Crystal Structure Of Vat(D) In Complex With Acetyl-Coa
pdb|1KK4|B Chain B, Crystal Structure Of Vat(D) In Complex With Acetyl-Coa
pdb|1KK4|C Chain C, Crystal Structure Of Vat(D) In Complex With Acetyl-Coa
pdb|1KK4|D Chain D, Crystal Structure Of Vat(D) In Complex With Acetyl-Coa
pdb|1KK4|E Chain E, Crystal Structure Of Vat(D) In Complex With Acetyl-Coa
pdb|1KK4|F Chain F, Crystal Structure Of Vat(D) In Complex With Acetyl-Coa
pdb|1KK5|A Chain A, Crystal Structure Of Vat(D) (Form Ii)
pdb|1KK5|B Chain B, Crystal Structure Of Vat(D) (Form Ii)
pdb|1KK5|C Chain C, Crystal Structure Of Vat(D) (Form Ii)
pdb|1KK5|D Chain D, Crystal Structure Of Vat(D) (Form Ii)
pdb|1KK5|E Chain E, Crystal Structure Of Vat(D) (Form Ii)
pdb|1KK5|F Chain F, Crystal Structure Of Vat(D) (Form Ii)
pdb|1KK6|A Chain A, Crystal Structure Of Vat(D) (Form I)
pdb|1KK6|B Chain B, Crystal Structure Of Vat(D) (Form I)
pdb|1KK6|C Chain C, Crystal Structure Of Vat(D) (Form I)
pdb|1MRL|A Chain A, Crystal Structure Of Streptogramin A Acetyltransferase
With Dalfopristin
pdb|1MRL|B Chain B, Crystal Structure Of Streptogramin A Acetyltransferase
With Dalfopristin
pdb|1MRL|C Chain C, Crystal Structure Of Streptogramin A Acetyltransferase
With Dalfopristin
pdb|1MR7|A Chain A, Crystal Structure Of Streptogramin A Acetyltransferase
pdb|1MR7|B Chain B, Crystal Structure Of Streptogramin A Acetyltransferase
pdb|1MR7|C Chain C, Crystal Structure Of Streptogramin A Acetyltransferase
pdb|1MR7|X Chain X, Crystal Structure Of Streptogramin A Acetyltransferase
pdb|1MR7|Y Chain Y, Crystal Structure Of Streptogramin A Acetyltransferase
pdb|1MR7|Z Chain Z, Crystal Structure Of Streptogramin A Acetyltransferase
pdb|3DHO|A Chain A, Structure Of Streptogramin Acetyltransferase In Complex
With An Inhibitor
pdb|3DHO|B Chain B, Structure Of Streptogramin Acetyltransferase In Complex
With An Inhibitor
pdb|3DHO|C Chain C, Structure Of Streptogramin Acetyltransferase In Complex
With An Inhibitor
pdb|3DHO|D Chain D, Structure Of Streptogramin Acetyltransferase In Complex
With An Inhibitor
pdb|3DHO|E Chain E, Structure Of Streptogramin Acetyltransferase In Complex
With An Inhibitor
pdb|3DHO|F Chain F, Structure Of Streptogramin Acetyltransferase In Complex
With An Inhibitor
Length = 209
Score = 34.3 bits (77), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Query: 195 QVGIAGSATIGDYVTLGGRVAVRDHVSIASKVRLAANSCVFKDITEPGDYGGFPAVPIHE 254
Q+ I G IG+ V +G V + V I +AANS V KDI GG PA I +
Sbjct: 107 QLPIKGDTIIGNDVWIGKDVVIMPGVKIGDGAIVAANSVVVKDIAPYMLAGGNPANEIKQ 166
Query: 255 -WRRQVANQIRSSK 267
+ + NQ+ K
Sbjct: 167 RFDQDTINQLLDIK 180
>pdb|1MR9|A Chain A, Crystal Structure Of Streptogramin A Acetyltransferase
With Acetyl-Coa Bound
pdb|1MR9|B Chain B, Crystal Structure Of Streptogramin A Acetyltransferase
With Acetyl-Coa Bound
pdb|1MR9|C Chain C, Crystal Structure Of Streptogramin A Acetyltransferase
With Acetyl-Coa Bound
pdb|1MR9|X Chain X, Crystal Structure Of Streptogramin A Acetyltransferase
With Acetyl-Coa Bound
pdb|1MR9|Y Chain Y, Crystal Structure Of Streptogramin A Acetyltransferase
With Acetyl-Coa Bound
pdb|1MR9|Z Chain Z, Crystal Structure Of Streptogramin A Acetyltransferase
With Acetyl-Coa Bound
Length = 209
Score = 34.3 bits (77), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Query: 195 QVGIAGSATIGDYVTLGGRVAVRDHVSIASKVRLAANSCVFKDITEPGDYGGFPAVPIHE 254
Q+ I G IG+ V +G V + V I +AANS V KDI GG PA I +
Sbjct: 107 QLPIKGDTIIGNDVWIGKDVVIXPGVKIGDGAIVAANSVVVKDIAPYXLAGGNPANEIKQ 166
Query: 255 -WRRQVANQIRSSK 267
+ + NQ+ K
Sbjct: 167 RFDQDTINQLLDIK 180
>pdb|3VBK|A Chain A, Crystal Structure Of The S84a Mutant Of Antd, An
N-Acyltransferase From Bacillus Cereus In Complex With
Dtdp-4-Amino-4,6-Dideoxyglucose And Coenzyme A
pdb|3VBK|C Chain C, Crystal Structure Of The S84a Mutant Of Antd, An
N-Acyltransferase From Bacillus Cereus In Complex With
Dtdp-4-Amino-4,6-Dideoxyglucose And Coenzyme A
pdb|3VBK|E Chain E, Crystal Structure Of The S84a Mutant Of Antd, An
N-Acyltransferase From Bacillus Cereus In Complex With
Dtdp-4-Amino-4,6-Dideoxyglucose And Coenzyme A
Length = 205
Score = 33.1 bits (74), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Query: 164 RDTVIGDHSKIDN--LVQIGHNVAIGKSCMLCGQVGIAGSATIGDYVTL-GGRVAVR--D 218
++ +I + I N ++ IG+NV I C+L G+V I + I Y L GG V + D
Sbjct: 37 KNVLISKKASIYNPGVISIGNNVRIDDFCILSGKVTIGSYSHIAAYTALYGGEVGIEMYD 96
Query: 219 HVSIASKVRLAA 230
+IAS+ + A
Sbjct: 97 FANIASRTIVYA 108
>pdb|3ECT|A Chain A, Crystal Structure Of The Hexapeptide-repeat Containing-
Acetyltransferase Vca0836 From Vibrio Cholerae
pdb|3NZ2|A Chain A, Crystal Structure Of Hexapeptide-Repeat
Containing-Acetyltransferase Vca0836 Complexed With
Acetyl Co Enzyme A From Vibrio Cholerae O1 Biovar Eltor
pdb|3NZ2|B Chain B, Crystal Structure Of Hexapeptide-Repeat
Containing-Acetyltransferase Vca0836 Complexed With
Acetyl Co Enzyme A From Vibrio Cholerae O1 Biovar Eltor
pdb|3NZ2|C Chain C, Crystal Structure Of Hexapeptide-Repeat
Containing-Acetyltransferase Vca0836 Complexed With
Acetyl Co Enzyme A From Vibrio Cholerae O1 Biovar Eltor
pdb|3NZ2|D Chain D, Crystal Structure Of Hexapeptide-Repeat
Containing-Acetyltransferase Vca0836 Complexed With
Acetyl Co Enzyme A From Vibrio Cholerae O1 Biovar Eltor
pdb|3NZ2|E Chain E, Crystal Structure Of Hexapeptide-Repeat
Containing-Acetyltransferase Vca0836 Complexed With
Acetyl Co Enzyme A From Vibrio Cholerae O1 Biovar Eltor
pdb|3NZ2|F Chain F, Crystal Structure Of Hexapeptide-Repeat
Containing-Acetyltransferase Vca0836 Complexed With
Acetyl Co Enzyme A From Vibrio Cholerae O1 Biovar Eltor
pdb|3NZ2|G Chain G, Crystal Structure Of Hexapeptide-Repeat
Containing-Acetyltransferase Vca0836 Complexed With
Acetyl Co Enzyme A From Vibrio Cholerae O1 Biovar Eltor
pdb|3NZ2|H Chain H, Crystal Structure Of Hexapeptide-Repeat
Containing-Acetyltransferase Vca0836 Complexed With
Acetyl Co Enzyme A From Vibrio Cholerae O1 Biovar Eltor
pdb|3NZ2|I Chain I, Crystal Structure Of Hexapeptide-Repeat
Containing-Acetyltransferase Vca0836 Complexed With
Acetyl Co Enzyme A From Vibrio Cholerae O1 Biovar Eltor
pdb|3NZ2|J Chain J, Crystal Structure Of Hexapeptide-Repeat
Containing-Acetyltransferase Vca0836 Complexed With
Acetyl Co Enzyme A From Vibrio Cholerae O1 Biovar Eltor
pdb|3NZ2|K Chain K, Crystal Structure Of Hexapeptide-Repeat
Containing-Acetyltransferase Vca0836 Complexed With
Acetyl Co Enzyme A From Vibrio Cholerae O1 Biovar Eltor
pdb|3NZ2|L Chain L, Crystal Structure Of Hexapeptide-Repeat
Containing-Acetyltransferase Vca0836 Complexed With
Acetyl Co Enzyme A From Vibrio Cholerae O1 Biovar Eltor
Length = 195
Score = 32.7 bits (73), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 46/108 (42%), Gaps = 8/108 (7%)
Query: 145 RIGNHVEIGANSCIDRGSWRDTVIGDHSKIDNLVQI---GHNVAIGKSCMLCGQVGIAGS 201
RIG+H I N G+ IGDH I Q H++ + I
Sbjct: 78 RIGDHTFINXNVVXLDGA--PITIGDHVLIGPSTQFYTASHSLDYRRRQ---AWETICKP 132
Query: 202 ATIGDYVTLGGRVAVRDHVSIASKVRLAANSCVFKDITEPGDYGGFPA 249
I D V +GG V + V+I ++ +AANS V +D+ GG PA
Sbjct: 133 IVIEDDVWIGGNVVINQGVTIGARSVVAANSVVNQDVPPDTLVGGTPA 180
>pdb|1OCX|A Chain A, E. Coli Maltose-O-Acetyltransferase
pdb|1OCX|B Chain B, E. Coli Maltose-O-Acetyltransferase
pdb|1OCX|C Chain C, E. Coli Maltose-O-Acetyltransferase
Length = 182
Score = 32.0 bits (71), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 18/84 (21%)
Query: 184 VAIGKSCMLCGQVGIAGSA------------------TIGDYVTLGGRVAVRDHVSIASK 225
+ IG +CML V I + TIG+ V +GGR + V+I
Sbjct: 93 IRIGDNCMLAPGVHIYTATHPIDPVARNSGAELGKPVTIGNNVWIGGRAVINPGVTIGDN 152
Query: 226 VRLAANSCVFKDITEPGDYGGFPA 249
V +A+ + V KD+ + GG PA
Sbjct: 153 VVVASGAVVTKDVPDNVVVGGNPA 176
>pdb|3VBP|A Chain A, Crystal Structure Of The D94n Mutant Of Antd, An
N-Acyltransferase From Bacillus Cereus In Complex With
Dtdp And Coenzyme A
pdb|3VBP|C Chain C, Crystal Structure Of The D94n Mutant Of Antd, An
N-Acyltransferase From Bacillus Cereus In Complex With
Dtdp And Coenzyme A
pdb|3VBP|E Chain E, Crystal Structure Of The D94n Mutant Of Antd, An
N-Acyltransferase From Bacillus Cereus In Complex With
Dtdp And Coenzyme A
Length = 205
Score = 32.0 bits (71), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Query: 164 RDTVIGDHSKIDN--LVQIGHNVAIGKSCMLCGQVGIAGSATIGDYVTL-GGRVAVR--D 218
++ +I + I N ++ IG+NV I C+L G+V I + I Y L GG V + D
Sbjct: 37 KNVLISKKASIYNPGVISIGNNVRIDDFCILSGKVTIGSYSHIAAYTALYGGEVGIEMYD 96
Query: 219 HVSIASKVRLAA 230
+I+S+ + A
Sbjct: 97 FANISSRTIVYA 108
>pdb|3VBN|A Chain A, Crystal Structure Of The D94a Mutant Of Antd, An
N-Acyltransferase From Bacillus Cereus In Complex With
Dtdp And Coenzyme A
pdb|3VBN|C Chain C, Crystal Structure Of The D94a Mutant Of Antd, An
N-Acyltransferase From Bacillus Cereus In Complex With
Dtdp And Coenzyme A
pdb|3VBN|E Chain E, Crystal Structure Of The D94a Mutant Of Antd, An
N-Acyltransferase From Bacillus Cereus In Complex With
Dtdp And Coenzyme A
Length = 205
Score = 32.0 bits (71), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Query: 164 RDTVIGDHSKIDN--LVQIGHNVAIGKSCMLCGQVGIAGSATIGDYVTL-GGRVAVR--D 218
++ +I + I N ++ IG+NV I C+L G+V I + I Y L GG V + D
Sbjct: 37 KNVLISKKASIYNPGVISIGNNVRIDDFCILSGKVTIGSYSHIAAYTALYGGEVGIEMYD 96
Query: 219 HVSIASKVRLAA 230
+I+S+ + A
Sbjct: 97 FANISSRTIVYA 108
Score = 28.1 bits (61), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 56/141 (39%), Gaps = 9/141 (6%)
Query: 54 CIDSTVLIEVGAIVHSKAVL--GANVCIGSGTVVGPAVTIGQSTNIGFNVALSNCIIGDS 111
+ VLI A +++ V+ G NV I ++ VTIG ++I AL +G
Sbjct: 34 SVGKNVLISKKASIYNPGVISIGNNVRIDDFCILSGKVTIGSYSHIAAYTALYGGEVGIE 93
Query: 112 CIIHNGVCIGQDGFGFFVDEHGNMLKKPQLLNARIGNHVEIGANSCIDRGSWRDTVIGDH 171
+ + D GN L P + N + + I + + +IG H
Sbjct: 94 MYDFANISSRTIVYAAIADFSGNALMGPTIPN----QYKNVKTGKVILK---KHVIIGAH 146
Query: 172 SKIDNLVQIGHNVAIGKSCML 192
S I V IG VA+G M+
Sbjct: 147 SIIFPNVVIGEGVAVGAMSMV 167
>pdb|3R8Y|A Chain A, Structure Of The Bacillus Anthracis Tetrahydropicolinate
Succinyltransferase
pdb|3R8Y|B Chain B, Structure Of The Bacillus Anthracis Tetrahydropicolinate
Succinyltransferase
pdb|3R8Y|C Chain C, Structure Of The Bacillus Anthracis Tetrahydropicolinate
Succinyltransferase
pdb|3R8Y|D Chain D, Structure Of The Bacillus Anthracis Tetrahydropicolinate
Succinyltransferase
pdb|3R8Y|E Chain E, Structure Of The Bacillus Anthracis Tetrahydropicolinate
Succinyltransferase
pdb|3R8Y|F Chain F, Structure Of The Bacillus Anthracis Tetrahydropicolinate
Succinyltransferase
Length = 240
Score = 31.6 bits (70), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 55/121 (45%), Gaps = 10/121 (8%)
Query: 144 ARIGNHVEIGANSCIDRGSWRD--TVIGDHSKIDNLVQIGHNVAIGKSCMLCGQVGIAG- 200
A I +HVEIG N+ I + + VIG+ S ID +G +GK+C + +AG
Sbjct: 98 AIIRDHVEIGDNAVIMMNATINIGAVIGEGSMIDMNAVLGGRATVGKNCHVGAGAVLAGV 157
Query: 201 -------SATIGDYVTLGGRVAVRDHVSIASKVRLAANSCVFKDITEPGDYGGFPAVPIH 253
+ D V +G V V + V++ +AA + V +D+ G PA I
Sbjct: 158 IEPPSAKPVIVEDDVVIGANVVVLEGVTVGKGAVVAAGAVVTEDVPPYTVVAGTPARVIK 217
Query: 254 E 254
E
Sbjct: 218 E 218
>pdb|3VBI|A Chain A, Crystal Structure Of Antd, An N-Acyltransferase From
Bacillus Cereus In Complex With
Dtdp-4-Amino-4,6-Dideoxyglucose And Coenzyme A
pdb|3VBI|C Chain C, Crystal Structure Of Antd, An N-Acyltransferase From
Bacillus Cereus In Complex With
Dtdp-4-Amino-4,6-Dideoxyglucose And Coenzyme A
pdb|3VBI|E Chain E, Crystal Structure Of Antd, An N-Acyltransferase From
Bacillus Cereus In Complex With
Dtdp-4-Amino-4,6-Dideoxyglucose And Coenzyme A
pdb|3VBJ|A Chain A, Crystal Structure Of Antd, An N-Acyltransferase From
Bacillus Cereus In Complex With Dtdp And
3-Hydroxybutyryl-Coa
pdb|3VBJ|C Chain C, Crystal Structure Of Antd, An N-Acyltransferase From
Bacillus Cereus In Complex With Dtdp And
3-Hydroxybutyryl-Coa
pdb|3VBJ|E Chain E, Crystal Structure Of Antd, An N-Acyltransferase From
Bacillus Cereus In Complex With Dtdp And
3-Hydroxybutyryl-Coa
Length = 205
Score = 31.6 bits (70), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Query: 164 RDTVIGDHSKIDN--LVQIGHNVAIGKSCMLCGQVGIAGSATIGDYVTL-GGRVAVR--D 218
++ +I + I N ++ IG+NV I C+L G+V I + I Y L GG V + D
Sbjct: 37 KNVLISKKASIYNPGVISIGNNVRIDDFCILSGKVTIGSYSHIAAYTALYGGEVGIEMYD 96
Query: 219 HVSIASKVRLAA 230
+I+S+ + A
Sbjct: 97 FANISSRTIVYA 108
>pdb|1HM9|A Chain A, Crystal Structure Of S.Pneumoniae
N-Acetylglucosamine-1-Phosphate Uridyltransferase, Glmu,
Bound To Acetyl Coenzyme A And Udp-N- Acetylglucosamine
pdb|1HM9|B Chain B, Crystal Structure Of S.Pneumoniae
N-Acetylglucosamine-1-Phosphate Uridyltransferase, Glmu,
Bound To Acetyl Coenzyme A And Udp-N- Acetylglucosamine
pdb|1HM8|A Chain A, Crystal Structure Of S.Pneumoniae
N-Acetylglucosamine-1-Phosphate Uridyltransferase, Glmu,
Bound To Acetyl Coenzyme A
pdb|1HM8|B Chain B, Crystal Structure Of S.Pneumoniae
N-Acetylglucosamine-1-Phosphate Uridyltransferase, Glmu,
Bound To Acetyl Coenzyme A
pdb|1HM0|A Chain A, Crystal Structure Of S.Pneumoniae N-Acetylglucosamine
1-Phosphate Uridyltransferase, Glmu
pdb|1HM0|B Chain B, Crystal Structure Of S.Pneumoniae N-Acetylglucosamine
1-Phosphate Uridyltransferase, Glmu
Length = 468
Score = 31.6 bits (70), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 90/226 (39%), Gaps = 32/226 (14%)
Query: 26 LFSTKSDIESRQQFQKWHNGGGIFHQSAC-IDSTVLIEVGAIVHSKAVLGANVCIGSGTV 84
L + +S + R + NG + A ID V I + + +L IG+ TV
Sbjct: 241 LATAESVMRRRINHKHMVNGVSFVNPEATYIDIDVEIAPEVQIEANVILKGQTKIGAETV 300
Query: 85 VGPAVTIGQSTNIGFNVALSNCIIGDSCIIHNGVCIGQDGFGFFVDEHGNMLKKPQL-LN 143
+ + ST IG ++N +I +S + +GV +G + ++ L
Sbjct: 301 LTNGTYVVDST-IGAGAVITNSMIEESSVA-DGVTVGP---------YAHIRPNSSLGAQ 349
Query: 144 ARIGNHVEIGANSCIDRGSWRDTVIGDHSKIDNLV-----QIGHNVAIGKSCMLCGQVGI 198
IGN VE+ +S IG+++K +L ++G NV G + G
Sbjct: 350 VHIGNFVEVKGSS-----------IGENTKAGHLTYIGNCEVGSNVNFGAGTITVNYDGK 398
Query: 199 AGSAT-IGDYVTLGGRVAVRDHVSIASKVRLAANSCVFKDITEPGD 243
T IGD V +G + V + + A S + KD+ P D
Sbjct: 399 NKYKTVIGDNVFVGSNSTIIAPVELGDNSLVGAGSTITKDV--PAD 442
Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 31/63 (49%)
Query: 70 KAVLGANVCIGSGTVVGPAVTIGQSTNIGFNVALSNCIIGDSCIIHNGVCIGQDGFGFFV 129
K V+G NV +GS + + V +G ++ +G ++ + D+ I G I +D + +
Sbjct: 402 KTVIGDNVFVGSNSTIIAPVELGDNSLVGAGSTITKDVPADAIAIGRGRQINKDEYATRL 461
Query: 130 DEH 132
H
Sbjct: 462 PHH 464
>pdb|2Z83|A Chain A, Crystal Structure Of Catalytic Domain Of Japanese
Encephalitis Virus Ns3 HelicaseNUCLEOSIDE TRIPHOSPHATASE
At A Resolution 1.8
Length = 459
Score = 31.2 bits (69), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 222 IASKVRLAANSCVFKDITEPGDYGGFPA--VPIHEWRRQVANQIRSS 266
IA+KV L + +F T PG FP PIH+ + ++ ++ SS
Sbjct: 135 IATKVELGEAAAIFMTATPPGTTDPFPDSNAPIHDLQDEIPDRAWSS 181
>pdb|4AAW|A Chain A, S.Pneumoniae Glmu In Complex With An Antibacterial
Inhibitor
pdb|4AC3|A Chain A, S.Pneumoniae Glmu In Complex With An Antibacterial
Inhibitor
Length = 459
Score = 31.2 bits (69), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 90/226 (39%), Gaps = 32/226 (14%)
Query: 26 LFSTKSDIESRQQFQKWHNGGGIFHQSAC-IDSTVLIEVGAIVHSKAVLGANVCIGSGTV 84
L + +S + R + NG + A ID V I + + +L IG+ TV
Sbjct: 232 LATAESVMRRRINHKHMVNGVSFVNPEATYIDIDVEIAPEVQIEANVILKGQTKIGAETV 291
Query: 85 VGPAVTIGQSTNIGFNVALSNCIIGDSCIIHNGVCIGQDGFGFFVDEHGNMLKKPQL-LN 143
+ + ST IG ++N +I +S + +GV +G + ++ L
Sbjct: 292 LTNGTYVVDST-IGAGAVITNSMIEESSVA-DGVTVGP---------YAHIRPNSSLGAQ 340
Query: 144 ARIGNHVEIGANSCIDRGSWRDTVIGDHSKIDNLV-----QIGHNVAIGKSCMLCGQVGI 198
IGN VE+ +S IG+++K +L ++G NV G + G
Sbjct: 341 VHIGNFVEVKGSS-----------IGENTKAGHLTYIGNCEVGSNVNFGAGTITVNYDGK 389
Query: 199 AGSAT-IGDYVTLGGRVAVRDHVSIASKVRLAANSCVFKDITEPGD 243
T IGD V +G + V + + A S + KD+ P D
Sbjct: 390 NKYKTVIGDNVFVGSNSTIIAPVELGDNSLVGAGSTITKDV--PAD 433
Score = 29.3 bits (64), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 31/63 (49%)
Query: 70 KAVLGANVCIGSGTVVGPAVTIGQSTNIGFNVALSNCIIGDSCIIHNGVCIGQDGFGFFV 129
K V+G NV +GS + + V +G ++ +G ++ + D+ I G I +D + +
Sbjct: 393 KTVIGDNVFVGSNSTIIAPVELGDNSLVGAGSTITKDVPADAIAIGRGRQINKDEYATRL 452
Query: 130 DEH 132
H
Sbjct: 453 PHH 455
>pdb|3VBM|A Chain A, Crystal Structure Of The S84t Mutant Of Antd, An
N-Acyltransferase From Bacillus Cereus In Complex With
Dtdp And Coenzyme A
pdb|3VBM|C Chain C, Crystal Structure Of The S84t Mutant Of Antd, An
N-Acyltransferase From Bacillus Cereus In Complex With
Dtdp And Coenzyme A
pdb|3VBM|E Chain E, Crystal Structure Of The S84t Mutant Of Antd, An
N-Acyltransferase From Bacillus Cereus In Complex With
Dtdp And Coenzyme A
Length = 205
Score = 31.2 bits (69), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 164 RDTVIGDHSKIDN--LVQIGHNVAIGKSCMLCGQVGIAGSATIGDYVTL-GGRVAVR--D 218
++ +I + I N ++ IG+NV I C+L G+V I + I Y L GG V + D
Sbjct: 37 KNVLISKKASIYNPGVISIGNNVRIDDFCILSGKVTIGSYSHIAAYTALYGGEVGIEMYD 96
Query: 219 HVSIASKVRLAA 230
+I S+ + A
Sbjct: 97 FANITSRTIVYA 108
>pdb|3Q1X|A Chain A, Crystal Structure Of Entamoeba Histolytica Serine
Acetyltransferase 1 In Complex With L-Serine
Length = 313
Score = 30.8 bits (68), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 197 GIAGSATIGDYVTLGGRVAVRDHVSIASKVRLAANSCVFKDI 238
G T+GDYVT+G V ++ + S VR+ AN + +D+
Sbjct: 219 GTKRHPTVGDYVTIGTGAKVLGNIIVGSHVRIGANCWIDRDV 260
Score = 28.1 bits (61), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 32/75 (42%), Gaps = 22/75 (29%)
Query: 104 SNCIIGDSCIIHNGVCIGQDGFGFFVDEHGNMLKK-----PQ-------------LLNAR 145
IIG+ C I+ V +G F E G ++K+ P L N
Sbjct: 188 ETAIIGEWCRIYQSVTLGAMHF----QEEGGVIKRGTKRHPTVGDYVTIGTGAKVLGNII 243
Query: 146 IGNHVEIGANSCIDR 160
+G+HV IGAN IDR
Sbjct: 244 VGSHVRIGANCWIDR 258
>pdb|3P1B|A Chain A, Crystal Structure Of The Native Serine Acetyltransferase 1
From Entamoeba Histolytica
Length = 314
Score = 30.8 bits (68), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 197 GIAGSATIGDYVTLGGRVAVRDHVSIASKVRLAANSCVFKDI 238
G T+GDYVT+G V ++ + S VR+ AN + +D+
Sbjct: 220 GTKRHPTVGDYVTIGTGAKVLGNIIVGSHVRIGANCWIDRDV 261
Score = 28.1 bits (61), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 32/75 (42%), Gaps = 22/75 (29%)
Query: 104 SNCIIGDSCIIHNGVCIGQDGFGFFVDEHGNMLKK-----PQ-------------LLNAR 145
IIG+ C I+ V +G F E G ++K+ P L N
Sbjct: 189 ETAIIGEWCRIYQSVTLGAMHF----QEEGGVIKRGTKRHPTVGDYVTIGTGAKVLGNII 244
Query: 146 IGNHVEIGANSCIDR 160
+G+HV IGAN IDR
Sbjct: 245 VGSHVRIGANCWIDR 259
>pdb|3VBL|A Chain A, Crystal Structure Of The S84c Mutant Of Antd, An
N-Acyltransferase From Bacillus Cereus In Complex With
Dtdp-4-Amino-4,6-Dideoxyglucose And Coenzyme A
pdb|3VBL|C Chain C, Crystal Structure Of The S84c Mutant Of Antd, An
N-Acyltransferase From Bacillus Cereus In Complex With
Dtdp-4-Amino-4,6-Dideoxyglucose And Coenzyme A
pdb|3VBL|E Chain E, Crystal Structure Of The S84c Mutant Of Antd, An
N-Acyltransferase From Bacillus Cereus In Complex With
Dtdp-4-Amino-4,6-Dideoxyglucose And Coenzyme A
Length = 205
Score = 30.8 bits (68), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 164 RDTVIGDHSKIDN--LVQIGHNVAIGKSCMLCGQVGIAGSATIGDYVTL-GGRVAVR--D 218
++ +I + I N ++ IG+NV I C+L G+V I + I Y L GG V + D
Sbjct: 37 KNVLISKKASIYNPGVISIGNNVRIDDFCILSGKVTIGSYSHIAAYTALYGGEVGIEMYD 96
Query: 219 HVSIASKVRLAA 230
+I S+ + A
Sbjct: 97 FANICSRTIVYA 108
Score = 30.4 bits (67), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 57/141 (40%), Gaps = 9/141 (6%)
Query: 54 CIDSTVLIEVGAIVHSKAVL--GANVCIGSGTVVGPAVTIGQSTNIGFNVALSNCIIGDS 111
+ VLI A +++ V+ G NV I ++ VTIG ++I AL +G
Sbjct: 34 SVGKNVLISKKASIYNPGVISIGNNVRIDDFCILSGKVTIGSYSHIAAYTALYGGEVGIE 93
Query: 112 CIIHNGVCIGQDGFGFFVDEHGNMLKKPQLLNARIGNHVEIGANSCIDRGSWRDTVIGDH 171
+C + D GN L P + N + + I + + +IG H
Sbjct: 94 MYDFANICSRTIVYAAIDDFSGNALMGPTIPN----QYKNVKTGKVILK---KHVIIGAH 146
Query: 172 SKIDNLVQIGHNVAIGKSCML 192
S I V IG VA+G M+
Sbjct: 147 SIIFPNVVIGEGVAVGAMSMV 167
>pdb|3P47|A Chain A, Crystal Structure Of Entamoeba Histolytica Serine
Acetyltransferase 1 In Complex With L-Cysteine
Length = 315
Score = 30.8 bits (68), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 197 GIAGSATIGDYVTLGGRVAVRDHVSIASKVRLAANSCVFKDI 238
G T+GDYVT+G V ++ + S VR+ AN + +D+
Sbjct: 221 GTKRHPTVGDYVTIGTGAKVLGNIIVGSHVRIGANCWIDRDV 262
Score = 28.1 bits (61), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 32/75 (42%), Gaps = 22/75 (29%)
Query: 104 SNCIIGDSCIIHNGVCIGQDGFGFFVDEHGNMLKK-----PQ-------------LLNAR 145
IIG+ C I+ V +G F E G ++K+ P L N
Sbjct: 190 ETAIIGEWCRIYQSVTLGAMHF----QEEGGVIKRGTKRHPTVGDYVTIGTGAKVLGNII 245
Query: 146 IGNHVEIGANSCIDR 160
+G+HV IGAN IDR
Sbjct: 246 VGSHVRIGANCWIDR 260
>pdb|3VNP|A Chain A, Crystal Structure Of Hypothetical Protein (Gk2848) From
Geobacillus Kaustophilus
pdb|3VNP|B Chain B, Crystal Structure Of Hypothetical Protein (Gk2848) From
Geobacillus Kaustophilus
pdb|3VNP|C Chain C, Crystal Structure Of Hypothetical Protein (Gk2848) From
Geobacillus Kaustophilus
Length = 183
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 48 IFHQSACIDSTVLIEVGAIVHSKAVLGANVCIGSGTVVGPAVTIGQST 95
I H SA + LI +G+I+ +A +G IG+G++V P I +T
Sbjct: 85 ILH-SAIVRKNALIGMGSIILDRAEIGEGAFIGAGSLVPPGKKIPPNT 131
>pdb|1KQA|A Chain A, Galactoside Acetyltransferase In Complex With Coenzyme A
pdb|1KQA|B Chain B, Galactoside Acetyltransferase In Complex With Coenzyme A
pdb|1KQA|C Chain C, Galactoside Acetyltransferase In Complex With Coenzyme A
pdb|1KRR|A Chain A, Galactoside Acetyltransferase In Complex With Acetyl-
Coenzyme A
pdb|1KRR|B Chain B, Galactoside Acetyltransferase In Complex With Acetyl-
Coenzyme A
pdb|1KRR|C Chain C, Galactoside Acetyltransferase In Complex With Acetyl-
Coenzyme A
pdb|1KRU|A Chain A, Galactoside Acetyltransferase In Complex With Iptg And
Coenzyme A
pdb|1KRU|B Chain B, Galactoside Acetyltransferase In Complex With Iptg And
Coenzyme A
pdb|1KRU|C Chain C, Galactoside Acetyltransferase In Complex With Iptg And
Coenzyme A
pdb|1KRV|A Chain A, Galactoside Acetyltransferase In Complex With Coa And Pnp-
Beta-Gal
pdb|1KRV|B Chain B, Galactoside Acetyltransferase In Complex With Coa And Pnp-
Beta-Gal
pdb|1KRV|C Chain C, Galactoside Acetyltransferase In Complex With Coa And Pnp-
Beta-Gal
Length = 203
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 20/35 (57%)
Query: 64 GAIVHSKAVLGANVCIGSGTVVGPAVTIGQSTNIG 98
G + +G NV IGS V+ P VTIG ++ IG
Sbjct: 125 GEMYSFPITIGNNVWIGSHVVINPGVTIGDNSVIG 159
>pdb|2WLC|A Chain A, Crystallographic Analysis Of The Polysialic Acid O-
Acetyltransferase Oatwy
pdb|2WLE|A Chain A, Crystallographic Analysis Of The Polysialic Acid O-
Acetyltransferase Oatwy
pdb|2WLE|B Chain B, Crystallographic Analysis Of The Polysialic Acid O-
Acetyltransferase Oatwy
pdb|2WLE|C Chain C, Crystallographic Analysis Of The Polysialic Acid O-
Acetyltransferase Oatwy
pdb|2WLF|A Chain A, Crystallographic Analysis Of The Polysialic Acid O-
Acetyltransferase Oatwy
pdb|2WLF|B Chain B, Crystallographic Analysis Of The Polysialic Acid O-
Acetyltransferase Oatwy
pdb|2WLF|C Chain C, Crystallographic Analysis Of The Polysialic Acid O-
Acetyltransferase Oatwy
pdb|2WLG|A Chain A, Crystallographic Analysis Of The Polysialic Acid O-
Acetyltransferase Oatwy
pdb|2WLG|B Chain B, Crystallographic Analysis Of The Polysialic Acid O-
Acetyltransferase Oatwy
pdb|2WLG|C Chain C, Crystallographic Analysis Of The Polysialic Acid O-
Acetyltransferase Oatwy
pdb|2WLD|A Chain A, Crystallographic Analysis Of The Polysialic Acid O-
Acetyltransferase Oatwy
pdb|2WLD|B Chain B, Crystallographic Analysis Of The Polysialic Acid O-
Acetyltransferase Oatwy
pdb|2WLD|C Chain C, Crystallographic Analysis Of The Polysialic Acid O-
Acetyltransferase Oatwy
Length = 215
Score = 29.3 bits (64), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 41/99 (41%), Gaps = 23/99 (23%)
Query: 184 VAIGKSCMLCGQVGIAGS-------------------ATIGDYVTLGGRVAVRDHVSIAS 224
++IGK CML I + IG++V LG V + V I +
Sbjct: 101 ISIGKDCMLAHGYEIRNTDMHPIYSLENGERINHGKDVIIGNHVWLGRNVTILKGVCIPN 160
Query: 225 KVRLAANSCVFKDITEPG-DYGGFPAVPIHE---WRRQV 259
V + +++ ++K EP G PA + E W R++
Sbjct: 161 NVVVGSHTVLYKSFKEPNCVIAGSPAKIVKENIVWGRKM 199
>pdb|1G95|A Chain A, Crystal Structure Of S.Pneumoniae Glmu, Apo Form
pdb|1G97|A Chain A, S.Pneumoniae Glmu Complexed With Udp-N-Acetylglucosamine
And Mg2+
Length = 459
Score = 29.3 bits (64), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 31/63 (49%)
Query: 70 KAVLGANVCIGSGTVVGPAVTIGQSTNIGFNVALSNCIIGDSCIIHNGVCIGQDGFGFFV 129
K V+G NV +GS + + V +G ++ +G ++ + D+ I G I +D + +
Sbjct: 393 KTVIGNNVFVGSNSTIIAPVELGDNSLVGAGSTITKDVPADAIAIGRGRQINKDEYATRL 452
Query: 130 DEH 132
H
Sbjct: 453 PHH 455
>pdb|1FWY|A Chain A, Crystal Structure Of N-Acetylglucosamine 1-Phosphate
Uridyltransferase Bound To Udp-Glcnac
pdb|1FWY|B Chain B, Crystal Structure Of N-Acetylglucosamine 1-Phosphate
Uridyltransferase Bound To Udp-Glcnac
pdb|1FXJ|A Chain A, Crystal Structure Of N-Acetylglucosamine 1-Phosphate
Uridyltransferase
pdb|1FXJ|B Chain B, Crystal Structure Of N-Acetylglucosamine 1-Phosphate
Uridyltransferase
Length = 331
Score = 28.9 bits (63), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 74 GANVCIGSGTVVGPAVTIGQSTNIGFNVALSNCIIGDSCII 114
G +V I + ++ VT+G IG + N +IGD C I
Sbjct: 269 GRDVEIDTNVIIEGNVTLGHRVKIGTGCVIKNSVIGDDCEI 309
>pdb|3JQY|B Chain B, Crystal Strucutre Of The Polysia Specific
Acetyltransferase Neuo
pdb|3JQY|A Chain A, Crystal Strucutre Of The Polysia Specific
Acetyltransferase Neuo
pdb|3JQY|C Chain C, Crystal Strucutre Of The Polysia Specific
Acetyltransferase Neuo
Length = 252
Score = 28.9 bits (63), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 42/110 (38%), Gaps = 16/110 (14%)
Query: 178 VQIGHNVAIGKSCMLCG-------------QVGIAGSATIGDYVTLGGRVAVRDHVSIAS 224
V IGH+ I + +L ++ A I YV +G V++ VS+ S
Sbjct: 127 VTIGHDCMIARDVILRASDGHPIFDIHSKKRINWAKDIIISSYVWVGRNVSIMKGVSVGS 186
Query: 225 KVRLAANSCVFKDITEPGDYGGFPAVPIHE---WRRQVANQIRSSKKRTS 271
+ S V KD+ G PA I W R ++ S KR S
Sbjct: 187 GSVIGYGSIVTKDVPSMCAAAGNPAKIIKRNIIWARTDKAELISDDKRCS 236
>pdb|3BFP|A Chain A, Crystal Structure Of Apo-Pgld From Campylobacter Jejuni
pdb|2VHE|A Chain A, Pgld-Coa Complex: An Acetyl Transferase From Campylobacter
Jejuni
pdb|2VHE|B Chain B, Pgld-Coa Complex: An Acetyl Transferase From Campylobacter
Jejuni
Length = 194
Score = 28.9 bits (63), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 60/137 (43%), Gaps = 19/137 (13%)
Query: 120 IGQDGFGFFVDEHGNMLKKPQLL---NA--RIGNHVEIGANSCIDRGSWRDTVIGDHSKI 174
I ++GF H + L P + NA I +V I A + I++G ++ S I
Sbjct: 67 ISENGFKIVNLIHKSALISPSAIVEENAGILIMPYVVINAKAKIEKG----VILNTSSVI 122
Query: 175 DNLVQIGH--NVAIGKSCMLCGQVGIAGSATIGDYVTLGGRVAVRDHVSIASKVRLAANS 232
++ IG +V++G C AG+ IG LG V ++S+A L +
Sbjct: 123 EHECVIGEFSHVSVGAKC--------AGNVKIGKNCFLGINSCVLPNLSLADDSILGGGA 174
Query: 233 CVFKDITEPGDYGGFPA 249
+ K+ E G + G PA
Sbjct: 175 TLVKNQDEKGVFVGVPA 191
Score = 27.3 bits (59), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 49/101 (48%), Gaps = 20/101 (19%)
Query: 36 RQQFQKWHNGG----GIFHQSACIDSTVLIEVGA--------IVHSKAVLGANVCIGSGT 83
++ +QK G + H+SA I + ++E A ++++KA + V + + +
Sbjct: 61 KKIYQKISENGFKIVNLIHKSALISPSAIVEENAGILIMPYVVINAKAKIEKGVILNTSS 120
Query: 84 VVGPAVTIGQSTNIGF------NVAL-SNCIIG-DSCIIHN 116
V+ IG+ +++ NV + NC +G +SC++ N
Sbjct: 121 VIEHECVIGEFSHVSVGAKCAGNVKIGKNCFLGINSCVLPN 161
>pdb|3BSS|A Chain A, Pgld From Campylobacter Jejuni, Nctc 11168, With Native
Substrate
pdb|3BSW|A Chain A, Pgld-Citrate Complex, From Campylobacter Jejuni Nctc 11168
pdb|3BSY|A Chain A, Pgld From Campylobacter Jejuni, Nctc 11168, In Complex
With Acetyl Coenzyme A
pdb|3BSY|B Chain B, Pgld From Campylobacter Jejuni, Nctc 11168, In Complex
With Acetyl Coenzyme A
pdb|3BSY|C Chain C, Pgld From Campylobacter Jejuni, Nctc 11168, In Complex
With Acetyl Coenzyme A
Length = 198
Score = 28.5 bits (62), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 60/137 (43%), Gaps = 19/137 (13%)
Query: 120 IGQDGFGFFVDEHGNMLKKPQLL---NA--RIGNHVEIGANSCIDRGSWRDTVIGDHSKI 174
I ++GF H + L P + NA I +V I A + I++G ++ S I
Sbjct: 71 ISENGFKIVNLIHKSALISPSAIVEENAGILIMPYVVINAKAKIEKG----VILNTSSVI 126
Query: 175 DNLVQIGH--NVAIGKSCMLCGQVGIAGSATIGDYVTLGGRVAVRDHVSIASKVRLAANS 232
++ IG +V++G C AG+ IG LG V ++S+A L +
Sbjct: 127 EHECVIGEFSHVSVGAKC--------AGNVKIGKNCFLGINSCVLPNLSLADDSILGGGA 178
Query: 233 CVFKDITEPGDYGGFPA 249
+ K+ E G + G PA
Sbjct: 179 TLVKNQDEKGVFVGVPA 195
>pdb|2NPO|A Chain A, Crystal Structure Of Putative Transferase From
Campylobacter Jejuni Subsp. Jejuni Nctc 11168
Length = 207
Score = 28.5 bits (62), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 60/137 (43%), Gaps = 19/137 (13%)
Query: 120 IGQDGFGFFVDEHGNMLKKPQLL---NA--RIGNHVEIGANSCIDRGSWRDTVIGDHSKI 174
I ++GF H + L P + NA I +V I A + I++G ++ S I
Sbjct: 70 ISENGFKIVNLIHKSALISPSAIVEENAGILIMPYVVINAKAKIEKG----VILNTSSVI 125
Query: 175 DNLVQIGH--NVAIGKSCMLCGQVGIAGSATIGDYVTLGGRVAVRDHVSIASKVRLAANS 232
++ IG +V++G C AG+ IG LG V ++S+A L +
Sbjct: 126 EHECVIGEFSHVSVGAKC--------AGNVKIGKNCFLGINSCVLPNLSLADDSILGGGA 177
Query: 233 CVFKDITEPGDYGGFPA 249
+ K+ E G + G PA
Sbjct: 178 TLVKNQDEKGVFVGVPA 194
>pdb|3SRT|A Chain A, The Crystal Structure Of A Maltose O-Acetyltransferase
From Clostridium Difficile 630
pdb|3SRT|B Chain B, The Crystal Structure Of A Maltose O-Acetyltransferase
From Clostridium Difficile 630
pdb|4ISX|A Chain A, The Crystal Structure Of Maltose O-acetyltransferase From
Clostridium Difficile 630 In Complex With Acetyl-coa
pdb|4ISX|B Chain B, The Crystal Structure Of Maltose O-acetyltransferase From
Clostridium Difficile 630 In Complex With Acetyl-coa
Length = 188
Score = 28.5 bits (62), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 69 SKAVLGANVCIGSGTVVGPAVTIGQSTNIG 98
S +G NV IG G ++ P +TIG + IG
Sbjct: 131 SPVKIGDNVWIGGGVIITPGITIGDNVVIG 160
>pdb|3FSX|A Chain A, Structure Of Tetrahydrodipicolinate N-Succinyltransferase
(Rv1201c; Dapd) From Mycobacterium Tuberculosis
pdb|3FSX|B Chain B, Structure Of Tetrahydrodipicolinate N-Succinyltransferase
(Rv1201c; Dapd) From Mycobacterium Tuberculosis
pdb|3FSX|C Chain C, Structure Of Tetrahydrodipicolinate N-Succinyltransferase
(Rv1201c; Dapd) From Mycobacterium Tuberculosis
pdb|3FSX|D Chain D, Structure Of Tetrahydrodipicolinate N-Succinyltransferase
(Rv1201c; Dapd) From Mycobacterium Tuberculosis
pdb|3FSX|E Chain E, Structure Of Tetrahydrodipicolinate N-Succinyltransferase
(Rv1201c; Dapd) From Mycobacterium Tuberculosis
pdb|3FSY|A Chain A, Structure Of Tetrahydrodipicolinate N-succinyltransferase
(rv1201c;dapd) In Complex With Succinyl-coa From
Mycobacterium Tuberculosis
pdb|3FSY|B Chain B, Structure Of Tetrahydrodipicolinate N-succinyltransferase
(rv1201c;dapd) In Complex With Succinyl-coa From
Mycobacterium Tuberculosis
pdb|3FSY|C Chain C, Structure Of Tetrahydrodipicolinate N-succinyltransferase
(rv1201c;dapd) In Complex With Succinyl-coa From
Mycobacterium Tuberculosis
pdb|3FSY|D Chain D, Structure Of Tetrahydrodipicolinate N-succinyltransferase
(rv1201c;dapd) In Complex With Succinyl-coa From
Mycobacterium Tuberculosis
pdb|3FSY|E Chain E, Structure Of Tetrahydrodipicolinate N-succinyltransferase
(rv1201c;dapd) In Complex With Succinyl-coa From
Mycobacterium Tuberculosis
Length = 332
Score = 28.5 bits (62), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 10/63 (15%)
Query: 182 HNVAIGKSCMLCGQVGIAGSATIGD--------YVTLGGRVAVRDHVSIASKVRLAANSC 233
H ++IGK C+L G+ ++GD YVT G RV + D S+ ++ +++
Sbjct: 232 HVISIGKRCLLGANSGLG--ISLGDDCVVEAGLYVTAGTRVTMPDSNSVKARELSGSSNL 289
Query: 234 VFK 236
+F+
Sbjct: 290 LFR 292
>pdb|1CJC|A Chain A, Structure Of Adrenodoxin Reductase Of Mitochondrial P450
Systems
pdb|1E1L|A Chain A, Structure Of Adrenodoxin Reductase In Complex With Nadp
Obtained By Cocrystallisation
pdb|1E1K|A Chain A, Adrenodoxin Reductase In Complex With Nadp+ Obtained By A
Soaking Experiment
pdb|1E1M|A Chain A, Adrenodoxin Reductase In Complex With Nadph Obtained By A
Soaking Experiment
pdb|1E1N|A Chain A, Structure Of Adrenodoxin Reductase At 2.4 Angstrom In
Crystal Form A''
pdb|1E6E|A Chain A, Adrenodoxin ReductaseADRENODOXIN COMPLEX OF MITOCHONDRIAL
P450 Systems
pdb|1E6E|C Chain C, Adrenodoxin ReductaseADRENODOXIN COMPLEX OF MITOCHONDRIAL
P450 Systems
Length = 460
Score = 28.1 bits (61), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 32/88 (36%), Gaps = 8/88 (9%)
Query: 119 CIGQDGFGFFVDEHGNMLKKPQLLNARIGNHVEIGANSCIDRGSWRDTVIGDHSKIDNLV 178
+G GF+ +H LL HV+I + G R V DH ++ N++
Sbjct: 11 VVGSGPAGFYTAQH--------LLKHHSRAHVDIYEKQLVPFGLVRFGVAPDHPEVKNVI 62
Query: 179 QIGHNVAIGKSCMLCGQVGIAGSATIGD 206
A C G V + T+ +
Sbjct: 63 NTFTQTARSDRCAFYGNVEVGRDVTVQE 90
>pdb|3ORJ|A Chain A, Crystal Structure Of A Sugar-Binding Protein
(Bacova_04391) From Bacteroides Ovatus At 2.16 A
Resolution
Length = 439
Score = 28.1 bits (61), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 52/134 (38%), Gaps = 27/134 (20%)
Query: 100 NVALSNCII----GDSCIIHNGVCIGQDGFGFFVDEHGNMLKKPQLLNARIG---NHVEI 152
NV ++ II G+ + + ++G FV+ P N + G N +
Sbjct: 148 NVVVTEGIISDLDGEYFXVDXPAGVSEEGGSIFVEGSNGGAYSPAYFNYKKGLLLNFDGV 207
Query: 153 GANSCIDRGSWRDTVIGDHSKIDNLVQIGH-NVAIGKSCML--------------CGQVG 197
GA +G+W D+ + IG NV+ G C L C +V
Sbjct: 208 GA-----QGAWGDSESXIQTTELESASIGEGNVSQGAYCRLPLERQLPVAAAKNRCAEVW 262
Query: 198 IAGSATIGDYVTLG 211
AG+ T D++TLG
Sbjct: 263 TAGNGTDPDWLTLG 276
>pdb|3IXC|A Chain A, Crystal Structure Of Hexapeptide Transferase Family
Protein From Anaplasma Phagocytophilum
Length = 191
Score = 27.7 bits (60), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 45/115 (39%), Gaps = 24/115 (20%)
Query: 52 SACIDSTVLIEVGAIVHSKAVLGANVCIGSGTVVG---PAVTIGQSTNIGFNVALSN--- 105
S +DST I A + +G N I GTV+ + +G+ TNI N +
Sbjct: 33 SPSVDSTAFIAGNARIIGDVCIGKNASIWYGTVLRGDVDKIEVGEGTNIQDNTVVHTDSM 92
Query: 106 ---------CIIGDSCIIHNGVCIGQDGF----GFFVD----EHGNMLKKPQLLN 143
IG SCI+H +G + F +D E G+ML LL
Sbjct: 93 HGDTVIGKFVTIGHSCILH-ACTLGNNAFVGMGSIVMDRAVMEEGSMLAAGSLLT 146
>pdb|1SSM|A Chain A, Serine Acetyltransferase- Apoenzyme (Truncated)
pdb|1SSM|B Chain B, Serine Acetyltransferase- Apoenzyme (Truncated)
pdb|1SSM|C Chain C, Serine Acetyltransferase- Apoenzyme (Truncated)
pdb|1SSM|D Chain D, Serine Acetyltransferase- Apoenzyme (Truncated)
pdb|1SSM|E Chain E, Serine Acetyltransferase- Apoenzyme (Truncated)
pdb|1SSM|F Chain F, Serine Acetyltransferase- Apoenzyme (Truncated)
Length = 242
Score = 27.7 bits (60), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 4/83 (4%)
Query: 167 VIGDHSKIDNLVQIGHNVAIGKSCMLCGQVGIAGSATIGDYVTLGGRVAVRDHVSIASKV 226
V+G+ S I+N V I V +G + G + + V +G + ++ +
Sbjct: 159 VVGETSVIENDVSILQGVTLGGTGKESGD----RHPKVREGVXIGAGAKILGNIEVGKYA 214
Query: 227 RLAANSCVFKDITEPGDYGGFPA 249
++ ANS V + E G PA
Sbjct: 215 KIGANSVVLNPVPEYATAAGVPA 237
>pdb|1SSQ|A Chain A, Serine Acetyltransferase- Complex With Cysteine
pdb|1SSQ|D Chain D, Serine Acetyltransferase- Complex With Cysteine
Length = 267
Score = 27.7 bits (60), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 4/83 (4%)
Query: 167 VIGDHSKIDNLVQIGHNVAIGKSCMLCGQVGIAGSATIGDYVTLGGRVAVRDHVSIASKV 226
V+G+ S I+N V I V +G + G + + V +G + ++ +
Sbjct: 159 VVGETSVIENDVSILQGVTLGGTGKESGD----RHPKVREGVMIGAGAKILGNIEVGKYA 214
Query: 227 RLAANSCVFKDITEPGDYGGFPA 249
++ ANS V + E G PA
Sbjct: 215 KIGANSVVLNPVPEYATAAGVPA 237
>pdb|3FTT|A Chain A, Crystal Structure Of The Galactoside O-Acetyltransferase
From Staphylococcus Aureus
Length = 199
Score = 27.7 bits (60), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 28/73 (38%), Gaps = 12/73 (16%)
Query: 178 VQIGHNVAIGKSCMLCGQVGI------------AGSATIGDYVTLGGRVAVRDHVSIASK 225
+ IG NV IG +C AG IG GG VAV V+I
Sbjct: 95 ITIGDNVFIGPNCGFYTATHPLNFHHRNEGFEKAGPIHIGSNTWFGGHVAVLPGVTIGEG 154
Query: 226 VRLAANSCVFKDI 238
+ A S V KDI
Sbjct: 155 SVIGAGSVVTKDI 167
>pdb|2IC7|A Chain A, Crystal Structure Of Maltose Transacetylase From
Geobacillus Kaustophilus
pdb|2IC7|B Chain B, Crystal Structure Of Maltose Transacetylase From
Geobacillus Kaustophilus
pdb|2IC7|C Chain C, Crystal Structure Of Maltose Transacetylase From
Geobacillus Kaustophilus
pdb|2P2O|A Chain A, Crystal Structure Of Maltose Transacetylase From
Geobacillus Kaustophilus P2(1) Crystal Form
pdb|2P2O|B Chain B, Crystal Structure Of Maltose Transacetylase From
Geobacillus Kaustophilus P2(1) Crystal Form
pdb|2P2O|C Chain C, Crystal Structure Of Maltose Transacetylase From
Geobacillus Kaustophilus P2(1) Crystal Form
pdb|2P2O|D Chain D, Crystal Structure Of Maltose Transacetylase From
Geobacillus Kaustophilus P2(1) Crystal Form
pdb|2P2O|E Chain E, Crystal Structure Of Maltose Transacetylase From
Geobacillus Kaustophilus P2(1) Crystal Form
pdb|2P2O|F Chain F, Crystal Structure Of Maltose Transacetylase From
Geobacillus Kaustophilus P2(1) Crystal Form
Length = 185
Score = 27.7 bits (60), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 23/49 (46%)
Query: 201 SATIGDYVTLGGRVAVRDHVSIASKVRLAANSCVFKDITEPGDYGGFPA 249
IG V +GGR + V+I +A+ + V KD+ GG PA
Sbjct: 130 PVVIGHNVWIGGRAVINPGVTIGDNAVIASGAVVTKDVPANAVVGGNPA 178
>pdb|1S80|A Chain A, Structure Of Serine Acetyltransferase From Haemophilis
Influenzae Rd
pdb|1S80|B Chain B, Structure Of Serine Acetyltransferase From Haemophilis
Influenzae Rd
pdb|1S80|C Chain C, Structure Of Serine Acetyltransferase From Haemophilis
Influenzae Rd
pdb|1S80|D Chain D, Structure Of Serine Acetyltransferase From Haemophilis
Influenzae Rd
pdb|1S80|E Chain E, Structure Of Serine Acetyltransferase From Haemophilis
Influenzae Rd
pdb|1S80|F Chain F, Structure Of Serine Acetyltransferase From Haemophilis
Influenzae Rd
Length = 278
Score = 27.7 bits (60), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 4/83 (4%)
Query: 167 VIGDHSKIDNLVQIGHNVAIGKSCMLCGQVGIAGSATIGDYVTLGGRVAVRDHVSIASKV 226
V+G+ S I+N V I V +G + G + + V +G + ++ +
Sbjct: 161 VVGETSVIENDVSILQGVTLGGTGKESGD----RHPKVREGVXIGAGAKILGNIEVGKYA 216
Query: 227 RLAANSCVFKDITEPGDYGGFPA 249
++ ANS V + E G PA
Sbjct: 217 KIGANSVVLNPVPEYATAAGVPA 239
>pdb|1SST|A Chain A, Serine Acetyltransferase- Complex With Coa
pdb|1SST|B Chain B, Serine Acetyltransferase- Complex With Coa
pdb|1SST|C Chain C, Serine Acetyltransferase- Complex With Coa
Length = 267
Score = 27.7 bits (60), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 4/83 (4%)
Query: 167 VIGDHSKIDNLVQIGHNVAIGKSCMLCGQVGIAGSATIGDYVTLGGRVAVRDHVSIASKV 226
V+G+ S I+N V I V +G + G + + V +G + ++ +
Sbjct: 159 VVGETSVIENDVSILQGVTLGGTGKESGD----RHPKVREGVMIGAGAKILGNIEVGKYA 214
Query: 227 RLAANSCVFKDITEPGDYGGFPA 249
++ ANS V + E G PA
Sbjct: 215 KIGANSVVLNPVPEYATAAGVPA 237
>pdb|3V4E|A Chain A, Crystal Structure Of The Galactoside O-Acetyltransferase
In Complex With Coa
pdb|3V4E|B Chain B, Crystal Structure Of The Galactoside O-Acetyltransferase
In Complex With Coa
pdb|3V4E|C Chain C, Crystal Structure Of The Galactoside O-Acetyltransferase
In Complex With Coa
Length = 202
Score = 27.3 bits (59), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 28/73 (38%), Gaps = 12/73 (16%)
Query: 178 VQIGHNVAIGKSCMLCGQVGI------------AGSATIGDYVTLGGRVAVRDHVSIASK 225
+ IG NV IG +C AG IG GG VAV V+I
Sbjct: 98 ITIGDNVFIGPNCGFYTATHPLNFHHRNEGFEKAGPIHIGSNTWFGGHVAVLPGVTIGEG 157
Query: 226 VRLAANSCVFKDI 238
+ A S V KDI
Sbjct: 158 SVIGAGSVVTKDI 170
>pdb|4DCL|A Chain A, Computationally Designed Self-Assembling Tetrahedron
Protein, T308, Crystallized In Space Group F23
Length = 207
Score = 27.3 bits (59), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 28/73 (38%), Gaps = 12/73 (16%)
Query: 178 VQIGHNVAIGKSCMLCGQVGI------------AGSATIGDYVTLGGRVAVRDHVSIASK 225
+ IG NV IG +C AG IG GG VAV V+I
Sbjct: 95 ITIGDNVFIGPNCGFYTATHPLNFHHRNEGFEKAGPIHIGSNTWFGGHVAVLPGVTIGEG 154
Query: 226 VRLAANSCVFKDI 238
+ A S V KDI
Sbjct: 155 SVIGAGSVVTKDI 167
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.138 0.429
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,200,938
Number of Sequences: 62578
Number of extensions: 337336
Number of successful extensions: 1017
Number of sequences better than 100.0: 81
Number of HSP's better than 100.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 721
Number of HSP's gapped (non-prelim): 184
length of query: 271
length of database: 14,973,337
effective HSP length: 97
effective length of query: 174
effective length of database: 8,903,271
effective search space: 1549169154
effective search space used: 1549169154
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (24.3 bits)