BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024194
(271 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P62371|SYH_LEPIC Histidine--tRNA ligase OS=Leptospira interrogans serogroup
Icterohaemorrhagiae serovar copenhageni (strain Fiocruz
L1-130) GN=hisS PE=3 SV=1
Length = 439
Score = 148 bits (374), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 116/186 (62%), Gaps = 4/186 (2%)
Query: 75 PPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRD-QLY 133
P KGTRDF PEDMRLRNW+F +E FG+EE D P+LES L+ K+GEEI + QLY
Sbjct: 12 PYKGTRDFYPEDMRLRNWMFSVMRETVLSFGYEEYDGPILESFDLYKAKSGEEIVERQLY 71
Query: 134 CFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQW 193
F D+G RRVA+RPE+TP+LAR+V +++ P++WF++ WRYE+ +GR REH+Q
Sbjct: 72 DFIDKGERRVAIRPEMTPTLARMVAGNLRNLPKPVRWFSIPNLWRYEQPGKGRLREHWQL 131
Query: 194 NMDIIGVPAVTV-LQEVLRCHSIPEHLFGKVCIIIDKIE--KLPLDVIKNDLKSAGMSEA 250
N+D+ GV + L+ +L SI + + K+ KL +KN LK G
Sbjct: 132 NVDLFGVDSHRAELEILLIADSILKKFGAPIGSYQIKVSHRKLLDSFLKNSLKLNGDQVH 191
Query: 251 AIEELL 256
+ +LL
Sbjct: 192 GVSKLL 197
>sp|Q8F9Y3|SYH_LEPIN Histidine--tRNA ligase OS=Leptospira interrogans serogroup
Icterohaemorrhagiae serovar Lai (strain 56601) GN=hisS
PE=3 SV=1
Length = 439
Score = 148 bits (373), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 116/186 (62%), Gaps = 4/186 (2%)
Query: 75 PPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRD-QLY 133
P KGTRDF PEDMRLRNW+F +E FG+EE D P+LES L+ K+GEEI + QLY
Sbjct: 12 PYKGTRDFYPEDMRLRNWMFSVMRETVLSFGYEEYDGPILESFDLYKAKSGEEIVERQLY 71
Query: 134 CFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQW 193
F D+G RRVA+RPE+TP+LAR+V +++ P++WF++ WRYE+ +GR REH+Q
Sbjct: 72 DFIDKGERRVAIRPEMTPTLARMVAGNLRNLPKPVRWFSIPNLWRYEQPGKGRLREHWQL 131
Query: 194 NMDIIGVPAVTV-LQEVLRCHSIPEHLFGKVCIIIDKIE--KLPLDVIKNDLKSAGMSEA 250
N+D+ GV + L+ +L SI + + K+ KL +KN LK G
Sbjct: 132 NVDLFGVDSHRAELEILLIADSILKKFGAPIGSYQIKVSHRKLLDSFLKNSLKLNGDQVH 191
Query: 251 AIEELL 256
+ +LL
Sbjct: 192 GVSKLL 197
>sp|B0SQQ4|SYH_LEPBP Histidine--tRNA ligase OS=Leptospira biflexa serovar Patoc (strain
Patoc 1 / ATCC 23582 / Paris) GN=hisS PE=3 SV=1
Length = 437
Score = 145 bits (366), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 69/143 (48%), Positives = 99/143 (69%), Gaps = 1/143 (0%)
Query: 69 QKIDVNPPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEI 128
QK+ KGTRDF PEDMRLRN+LF ++V R +G+EE D P++ES L+ K GEEI
Sbjct: 4 QKLTTENYKGTRDFYPEDMRLRNYLFSVMKDVVRSYGYEEYDGPMVESLDLYRAKTGEEI 63
Query: 129 -RDQLYCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRR 187
Q+Y F D+G+R VA+RPE+TP++AR+V +K + + P++WF++ WRYE+ GR
Sbjct: 64 VGKQIYNFIDKGDREVAIRPEMTPTVARMVAKKLRELPRPIRWFSIPNLWRYEQPGHGRL 123
Query: 188 REHYQWNMDIIGVPAVTVLQEVL 210
REH+Q N+D+ GV + E+L
Sbjct: 124 REHWQLNVDMFGVTSSRAELEIL 146
>sp|B0SH39|SYH_LEPBA Histidine--tRNA ligase OS=Leptospira biflexa serovar Patoc (strain
Patoc 1 / Ames) GN=hisS PE=3 SV=1
Length = 437
Score = 145 bits (366), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 69/143 (48%), Positives = 99/143 (69%), Gaps = 1/143 (0%)
Query: 69 QKIDVNPPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEI 128
QK+ KGTRDF PEDMRLRN+LF ++V R +G+EE D P++ES L+ K GEEI
Sbjct: 4 QKLTTENYKGTRDFYPEDMRLRNYLFSVMKDVVRSYGYEEYDGPMVESLDLYRAKTGEEI 63
Query: 129 -RDQLYCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRR 187
Q+Y F D+G+R VA+RPE+TP++AR+V +K + + P++WF++ WRYE+ GR
Sbjct: 64 VGKQIYNFIDKGDREVAIRPEMTPTVARMVAKKLRELPRPIRWFSIPNLWRYEQPGHGRL 123
Query: 188 REHYQWNMDIIGVPAVTVLQEVL 210
REH+Q N+D+ GV + E+L
Sbjct: 124 REHWQLNVDMFGVTSSRAELEIL 146
>sp|Q04X87|SYH_LEPBL Histidine--tRNA ligase OS=Leptospira borgpetersenii serovar
Hardjo-bovis (strain L550) GN=hisS PE=3 SV=1
Length = 439
Score = 145 bits (365), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 70/137 (51%), Positives = 96/137 (70%), Gaps = 1/137 (0%)
Query: 75 PPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRD-QLY 133
P KGTRDF PE+MRLRNW+F +E FG+EE D P+LES L+ K+GEEI + QLY
Sbjct: 12 PYKGTRDFYPEEMRLRNWMFSIMRETVLSFGYEEYDGPILESFDLYKAKSGEEIVERQLY 71
Query: 134 CFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQW 193
F D+G RRVA+RPE+TP+LAR+V +++ P++WF++ WRYE+ +GR REH+Q
Sbjct: 72 DFIDKGERRVAIRPEMTPTLARMVAGNLRNLPRPVRWFSIPNLWRYEQPGKGRLREHWQL 131
Query: 194 NMDIIGVPAVTVLQEVL 210
N+D+ GV E+L
Sbjct: 132 NVDLFGVDTHRAELEIL 148
>sp|Q04WC4|SYH_LEPBJ Histidine--tRNA ligase OS=Leptospira borgpetersenii serovar
Hardjo-bovis (strain JB197) GN=hisS PE=3 SV=1
Length = 439
Score = 145 bits (365), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 70/137 (51%), Positives = 96/137 (70%), Gaps = 1/137 (0%)
Query: 75 PPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRD-QLY 133
P KGTRDF PE+MRLRNW+F +E FG+EE D P+LES L+ K+GEEI + QLY
Sbjct: 12 PYKGTRDFYPEEMRLRNWMFSIMRETVLSFGYEEYDGPILESFDLYKAKSGEEIVERQLY 71
Query: 134 CFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQW 193
F D+G RRVA+RPE+TP+LAR+V +++ P++WF++ WRYE+ +GR REH+Q
Sbjct: 72 DFIDKGERRVAIRPEMTPTLARMVAGNLRNLPRPVRWFSIPNLWRYEQPGKGRLREHWQL 131
Query: 194 NMDIIGVPAVTVLQEVL 210
N+D+ GV E+L
Sbjct: 132 NVDLFGVDTHRAELEIL 148
>sp|Q5UXW4|SYH_HALMA Histidine--tRNA ligase OS=Haloarcula marismortui (strain ATCC 43049
/ DSM 3752 / JCM 8966 / VKM B-1809) GN=hisS PE=3 SV=1
Length = 435
Score = 132 bits (333), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 60/134 (44%), Positives = 88/134 (65%)
Query: 77 KGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCFE 136
KG RDF P++M+ R W ++V++ +GF E+ P LE +++ K+GEEI ++LY FE
Sbjct: 6 KGFRDFYPKEMQARRWAMDTLEDVAQRYGFREIGTPALEPTEMYVDKSGEEIVEELYSFE 65
Query: 137 DRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNMD 196
D+G R+VAL PELTP++AR+ + K + +S P+KW + WRYE +GR RE YQ N+D
Sbjct: 66 DKGGRKVALTPELTPTVARMFVAKQQELSKPIKWVSTRPFWRYEEPQQGRFREFYQTNVD 125
Query: 197 IIGVPAVTVLQEVL 210
I G T E+L
Sbjct: 126 IFGSAEPTADAEIL 139
>sp|O58028|SYH_PYRHO Histidine--tRNA ligase OS=Pyrococcus horikoshii (strain ATCC 700860
/ DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=hisS
PE=3 SV=1
Length = 431
Score = 130 bits (326), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/214 (35%), Positives = 115/214 (53%), Gaps = 27/214 (12%)
Query: 77 KGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCFE 136
KGTRDF PEDM R W+F +EV +GF+E+ PV+E LF ++GEE+ QLY F+
Sbjct: 6 KGTRDFLPEDMAKRRWVFEKIREVFEAYGFKEILTPVMEYTKLFQLRSGEEVVKQLYAFK 65
Query: 137 DRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNMD 196
D+G R V+LRP++T S+ARL + + P+KW+ + +RYE GR RE +Q ++
Sbjct: 66 DKGGRDVSLRPDMTSSVARLYVNSFQMAPKPIKWYYIANMFRYEEPQSGRYREFWQAGVE 125
Query: 197 IIGVPAVTVLQEV------------LRCHSIP-------EHLFGKVCI--------IIDK 229
+IG V EV LR ++ + G + + IIDK
Sbjct: 126 LIGSDKVEADAEVIALFVESYLSTGLRDFTVNIGDRILLDEFAGMLGVSDDIGLMRIIDK 185
Query: 230 IEKLPLDVIKNDLKSAGMSEAAIEELLRVLSIKS 263
+KL + N LK G+ E+ IE++L ++ IK
Sbjct: 186 RDKLSQEEFINLLKEFGLGESEIEKVLELVEIKG 219
>sp|Q9HLX5|SYH_THEAC Histidine--tRNA ligase OS=Thermoplasma acidophilum (strain ATCC
25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
GN=hisS PE=1 SV=1
Length = 426
Score = 127 bits (320), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 73/213 (34%), Positives = 106/213 (49%), Gaps = 29/213 (13%)
Query: 68 LQKIDVNPPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEE 127
+ ++ + +G RDF PEDM + ++F +E + FGF +DFP LE L+ K+GEE
Sbjct: 1 MYRLQIEKIRGFRDFYPEDMDVEKFIFKTAEEAAEAFGFRRIDFPSLEYLDLYRIKSGEE 60
Query: 128 IRDQLYCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRR 187
+ Q Y F D+G R V L PE TPS R+V + K + PL+W++ + WRYE GR
Sbjct: 61 LLQQTYSFVDKGGREVTLIPEATPSTVRMVTSR-KDLQRPLRWYSFPKVWRYEEPQAGRY 119
Query: 188 REHYQWNMDIIGVPAVTVLQEVLRCHS--------------------IPEHLFG------ 221
REHYQ+N DI G + EV+ S I E + G
Sbjct: 120 REHYQFNADIFGSDSPEADAEVIALASSILDRLGLQDIYEIRINSRKIMEEIIGGMTSSD 179
Query: 222 --KVCIIIDKIEKLPLDVIKNDLKSAGMSEAAI 252
V IID+ K+ + + L+SAG+ E +
Sbjct: 180 PFSVFSIIDRYHKISREEFVDQLRSAGIGEDGV 212
>sp|Q97CE6|SYH_THEVO Histidine--tRNA ligase OS=Thermoplasma volcanium (strain ATCC 51530
/ DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) GN=hisS PE=3
SV=1
Length = 426
Score = 127 bits (319), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 108/214 (50%), Gaps = 33/214 (15%)
Query: 77 KGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCFE 136
KG RDF PEDM + ++F V+ +GF+ +DFP LE L+ K+GEE+ +Q Y F
Sbjct: 7 KGFRDFYPEDMEIEKFIFETASSVAESYGFKRIDFPSLEYIDLYRIKSGEELLNQTYSFT 66
Query: 137 DRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNMD 196
DRG R V L PE TPS R++ + K ++ P++W++ + WRYE GR REHYQ+N D
Sbjct: 67 DRGGREVTLIPEATPSTVRMLTSR-KDIAKPVRWYSFPKVWRYEEPQAGRFREHYQFNAD 125
Query: 197 IIG------------------------------VPAVTVLQEVLRCHSIPEHLFGKVCII 226
I G V + +++++L I + V I
Sbjct: 126 IFGPSNEEADAEIISLASGILDGLGLSGAYEIRVNSRIMMEDILNGMGIADPY--TVFSI 183
Query: 227 IDKIEKLPLDVIKNDLKSAGMSEAAIEELLRVLS 260
+D+ K+ + +DL S G+SE + R+ S
Sbjct: 184 VDRFHKVSKETFVDDLMSVGLSEENSNTIYRMCS 217
>sp|B1ZUW6|SYH_OPITP Histidine--tRNA ligase OS=Opitutus terrae (strain DSM 11246 /
PB90-1) GN=hisS PE=3 SV=1
Length = 437
Score = 126 bits (317), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 115/223 (51%), Gaps = 32/223 (14%)
Query: 78 GTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCFED 137
G R+F P+ + RN +F +++ + FGF E D PVLE L+ K+G+EI QL+ F D
Sbjct: 9 GFREFYPDALARRNHIFRLWRQTAVAFGFAEYDAPVLEPLELYKTKSGDEIEAQLFSFTD 68
Query: 138 RGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNMDI 197
+G R VALRPE+TP++ R+V K ++ P+KWF++ + +RYER +GR R +Q+N D+
Sbjct: 69 KGGREVALRPEMTPTVCRMVGAKANALKRPIKWFSIAEYYRYERAQKGRERAFFQFNADL 128
Query: 198 IGVPA-------VTVLQEVLRCHSIPEHLFG------------------------KVCII 226
P + +L + L+ + E F V
Sbjct: 129 FAEPGPEAEIELIALLTQCLKAFGLTEQDFYIRLSDRNLWFFYLEALGLDEPRIRAVLSA 188
Query: 227 IDKIEKLPLDVIKNDLKSAGMSEAAIEE-LLRVLSIKSLTELE 268
+DK EK+ D K + G + A+++ +L L IK+L LE
Sbjct: 189 VDKFEKVGDDAFKPYAEQFGPLDLALKQRVLEFLQIKTLASLE 231
>sp|Q8U431|SYH_PYRFU Histidine--tRNA ligase OS=Pyrococcus furiosus (strain ATCC 43587 /
DSM 3638 / JCM 8422 / Vc1) GN=hisS PE=3 SV=1
Length = 432
Score = 126 bits (316), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 115/214 (53%), Gaps = 27/214 (12%)
Query: 77 KGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCFE 136
KGTRDF PE+M R W+F +E +GF+EV P +E LF ++GEE+ QLY F+
Sbjct: 6 KGTRDFLPEEMVKRRWVFERIRERFETYGFKEVLTPTMEYTKLFELRSGEEVVKQLYAFK 65
Query: 137 DRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNMD 196
D+G R V+LRP++T S+ARL + ++ P+KW+ + +RYE GR RE +Q ++
Sbjct: 66 DKGGRDVSLRPDMTSSVARLYVNMFQTAPKPIKWYYIANMFRYEEPQSGRYREFWQAGVE 125
Query: 197 IIGVPAVTVLQEVLRCH--------------SIPEHL----FGKVCI---------IIDK 229
+IG V EV+ +I + + F K+ IIDK
Sbjct: 126 LIGSDKVEADAEVIALFVESYLATGLREFTVNIGDRILLDEFAKMLGVKDDIGLMRIIDK 185
Query: 230 IEKLPLDVIKNDLKSAGMSEAAIEELLRVLSIKS 263
+KLP + N LK G+ + IE++L +++IK
Sbjct: 186 KDKLPQEDFINALKEFGLDKNGIEKVLELINIKG 219
>sp|B9LRS2|SYH_HALLT Histidine--tRNA ligase OS=Halorubrum lacusprofundi (strain ATCC
49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=hisS PE=3 SV=1
Length = 442
Score = 125 bits (315), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 57/134 (42%), Positives = 86/134 (64%)
Query: 77 KGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCFE 136
KG RDF P + R + ++ + +GF E+ P LE +++ K+GEEI ++LY FE
Sbjct: 6 KGFRDFYPGEQSARREVTDAIEDAASRYGFREIATPALERTEMYVDKSGEEIVEELYAFE 65
Query: 137 DRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNMD 196
D+G R V++ PELTP++AR+V+ KG+ +S P+KW + WRYE++ +GR RE YQ N+D
Sbjct: 66 DKGGRGVSMTPELTPTVARMVVAKGQELSKPIKWMSTRPFWRYEQVQQGRFREFYQTNID 125
Query: 197 IIGVPAVTVLQEVL 210
+ G A EVL
Sbjct: 126 VFGSSAPEADAEVL 139
>sp|Q3IMP5|SYH_NATPD Histidine--tRNA ligase OS=Natronomonas pharaonis (strain DSM 2160 /
ATCC 35678) GN=hisS PE=3 SV=1
Length = 432
Score = 125 bits (315), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 57/123 (46%), Positives = 84/123 (68%)
Query: 77 KGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCFE 136
KG R+F P +M R + + +R +GF EV P LE L++ K+GEEI ++LY FE
Sbjct: 6 KGFREFYPGEMSARREVTDTIETRARRYGFREVGTPALERTQLYVDKSGEEIVEELYAFE 65
Query: 137 DRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNMD 196
D+G R V+L PELTP++AR+V+ K ++++ P+KWF+ WRYE++ +GR RE YQ N+D
Sbjct: 66 DKGGREVSLTPELTPTVARMVVAKQQALAKPVKWFSTRPFWRYEQVQQGRFREFYQTNID 125
Query: 197 IIG 199
I G
Sbjct: 126 IFG 128
>sp|Q9UY31|SYH_PYRAB Histidine--tRNA ligase OS=Pyrococcus abyssi (strain GE5 / Orsay)
GN=hisS PE=3 SV=1
Length = 431
Score = 125 bits (314), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 113/214 (52%), Gaps = 27/214 (12%)
Query: 77 KGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCFE 136
KGTRDF PE+M R W+F +EV +GF+EV PV+E LF ++GEE+ QLY F+
Sbjct: 6 KGTRDFLPEEMVKRRWVFEKIREVFETYGFKEVLTPVMEYTKLFQLRSGEEVVKQLYAFK 65
Query: 137 DRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNMD 196
D+G R VALRP++T S+ARL + ++ P+KW+ + +RYE GR RE +Q ++
Sbjct: 66 DKGGRDVALRPDMTSSVARLYVNSFQTAPKPIKWYYIANMFRYEEPQSGRYREFWQAGVE 125
Query: 197 IIGVPAVTVLQEVLRCH--------------SIPEHL----FGKVCI---------IIDK 229
+IG + EV+ +I + + F K+ IIDK
Sbjct: 126 LIGSDKIEADAEVIALFVDSYLSTGLKDFTVNIGDRVLLDEFAKMLGVKDDIGLMRIIDK 185
Query: 230 IEKLPLDVIKNDLKSAGMSEAAIEELLRVLSIKS 263
+KL + L G+ E IE++L ++ IK
Sbjct: 186 KDKLSQEEFLKALGEFGLDENGIEKVLNLIEIKG 219
>sp|B8GDZ3|SYH_METPE Histidine--tRNA ligase OS=Methanosphaerula palustris (strain ATCC
BAA-1556 / DSM 19958 / E1-9c) GN=hisS PE=3 SV=1
Length = 409
Score = 121 bits (304), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 118/217 (54%), Gaps = 24/217 (11%)
Query: 73 VNPPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQL 132
V P+GTRDF P++M R + +E R +G+ EV P+ E +LF ++G+ I D++
Sbjct: 2 VQRPRGTRDFLPDEMEARRMIEGRMREAVRRWGYREVATPIFEDLSLFTMRSGQGIIDEM 61
Query: 133 YCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQ 192
Y F+D+G R +ALRPELT ++ R+ + + + ++ PL+W C+RYER +GR R+ +Q
Sbjct: 62 YVFQDKGGRDLALRPELTAAVLRMYVNEARVLAKPLRWCYFADCFRYERPQKGRYRQFWQ 121
Query: 193 WNMDIIGVPAVTVLQEVLRCH------------------SIPEHLFGKVC-----IIIDK 229
+ +++IG EV+ + +HL V ++
Sbjct: 122 FGVELIGADTAAADAEVILVADNAIRSSGLDYDLKIGHLGLMKHLLADVGEEVRRKVMAY 181
Query: 230 IEKLPLDVIKNDLKSAGMSEAAIEELLRVLSIKSLTE 266
++K D +K+ L++AG++ A + L R+L+ ++L E
Sbjct: 182 LDKKEFDGLKDYLETAGLA-ALTDPLTRLLAAETLDE 217
>sp|Q18DQ2|SYH_HALWD Histidine--tRNA ligase OS=Haloquadratum walsbyi (strain DSM 16790)
GN=hisS PE=3 SV=1
Length = 434
Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/134 (41%), Positives = 81/134 (60%)
Query: 77 KGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCFE 136
KG RDF P +M R + + + +GF EV P LE +++ K+GE I ++LY F
Sbjct: 6 KGFRDFYPPEMTARRQVIDILETTATQYGFREVGTPTLEQTQMYVDKSGEGIEEELYAFS 65
Query: 137 DRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNMD 196
D G R V L PELTP++AR+V+ K +++S P+KW + WRYE++ +GR RE YQ N+D
Sbjct: 66 DDGGRDVTLIPELTPTVARMVVDKQQALSKPIKWVSTRPFWRYEQVQQGRFREFYQTNVD 125
Query: 197 IIGVPAVTVLQEVL 210
I G E+L
Sbjct: 126 IFGTADPIADAEIL 139
>sp|Q5JIM2|SYH_PYRKO Histidine--tRNA ligase OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=hisS PE=3 SV=1
Length = 436
Score = 119 bits (297), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 115/219 (52%), Gaps = 27/219 (12%)
Query: 73 VNPPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQL 132
++ KGTRD PE+M R W+F +EV F F+EV P E LF ++GEE+ QL
Sbjct: 4 LDKVKGTRDLLPEEMAKRRWVFERIREVFEGFNFQEVLTPTFEYTELFKLRSGEEVVKQL 63
Query: 133 YCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQ 192
Y F+D+G R ++LRP++T S+ARL + + ++ P+KW+ + +RYE GR RE +Q
Sbjct: 64 YAFQDKGGRDISLRPDMTSSVARLYVNRFQNAPKPIKWYYIANMFRYEEPQSGRYREFWQ 123
Query: 193 WNMDIIGVPAVTVLQEVLRCHS--------------IPEHL----FGKVCII-------- 226
+++IG V EV+ + I + + F K+ +
Sbjct: 124 AGVELIGSDRVEADAEVIALFTQSYLAVGLEDFTVNIGDRILLDEFAKMLGVEDDIGLMR 183
Query: 227 -IDKIEKLPLDVIKNDLKSAGMSEAAIEELLRVLSIKSL 264
IDK +K+ + L+ G+++ +E++L ++ IK L
Sbjct: 184 LIDKKDKMSREEFVGALREFGLNDDGVEKVLSLIEIKGL 222
>sp|A2SQI5|SYH_METLZ Histidine--tRNA ligase OS=Methanocorpusculum labreanum (strain ATCC
43576 / DSM 4855 / Z) GN=hisS PE=3 SV=1
Length = 410
Score = 119 bits (297), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 90/150 (60%), Gaps = 7/150 (4%)
Query: 73 VNPPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQL 132
+ P+GTRDF P +M R ++ + V+ FG+ E+ P+ E LF K+GE I +++
Sbjct: 2 IQKPRGTRDFLPAEMAQRRFVEQKMRAVAATFGYGEIVTPMFEELELFTIKSGEGIINEM 61
Query: 133 YCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQ 192
Y FED+G R++ LRPE+T ++ R + + + PL+WF +C+RYER +GR R+ +Q
Sbjct: 62 YAFEDKGGRKITLRPEITAAVLRAYVNEAQMAPKPLRWFYFAECFRYERPQKGRYRQFWQ 121
Query: 193 WNMDIIGVPA-------VTVLQEVLRCHSI 215
+ ++IG + +++ E+LRC +
Sbjct: 122 FGSELIGADSAAADAEVISLAYELLRCTGV 151
>sp|Q9HNP5|SYH_HALSA Histidine--tRNA ligase OS=Halobacterium salinarum (strain ATCC
700922 / JCM 11081 / NRC-1) GN=hisS PE=3 SV=1
Length = 432
Score = 116 bits (291), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 82/134 (61%)
Query: 77 KGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCFE 136
KG RDF P +M R ++ + +GF EV P +E +++ K+G EI D+LY F
Sbjct: 6 KGFRDFYPAEMGPRRAAIDAIEDAAASYGFREVGTPAMERTEMYVDKSGAEIVDELYSFT 65
Query: 137 DRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNMD 196
D+G R VAL PELTP++AR+V+ K +++S P+KW++ WRYE +GR RE YQ N+D
Sbjct: 66 DQGGRDVALTPELTPTVARMVVAKQQALSKPIKWYSSRPFWRYEEPQQGRFREFYQTNLD 125
Query: 197 IIGVPAVTVLQEVL 210
I G EVL
Sbjct: 126 IFGTSDPRADAEVL 139
>sp|B0R6V2|SYH_HALS3 Histidine--tRNA ligase OS=Halobacterium salinarum (strain ATCC
29341 / DSM 671 / R1) GN=hisS PE=3 SV=1
Length = 432
Score = 116 bits (291), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 82/134 (61%)
Query: 77 KGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCFE 136
KG RDF P +M R ++ + +GF EV P +E +++ K+G EI D+LY F
Sbjct: 6 KGFRDFYPAEMGPRRAAIDAIEDAAASYGFREVGTPAMERTEMYVDKSGAEIVDELYSFT 65
Query: 137 DRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNMD 196
D+G R VAL PELTP++AR+V+ K +++S P+KW++ WRYE +GR RE YQ N+D
Sbjct: 66 DQGGRDVALTPELTPTVARMVVAKQQALSKPIKWYSSRPFWRYEEPQQGRFREFYQTNLD 125
Query: 197 IIGVPAVTVLQEVL 210
I G EVL
Sbjct: 126 IFGTSDPRADAEVL 139
>sp|Q2FTC5|SYH_METHJ Histidine--tRNA ligase OS=Methanospirillum hungatei (strain JF-1 /
DSM 864) GN=hisS PE=3 SV=1
Length = 408
Score = 116 bits (290), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 87/138 (63%)
Query: 73 VNPPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQL 132
+ P+GTRD P++M R + + +RL+GF E+ PV E LF ++GE I +++
Sbjct: 2 IQKPRGTRDMLPDEMERRREIEARMRARARLYGFREIATPVFEELELFTIRSGEGIINEM 61
Query: 133 YCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQ 192
Y FED+G R +ALRPELT + R+ +++G+S++ P+KW C+RYER +GR R+ +Q
Sbjct: 62 YVFEDKGGRSLALRPELTAPVLRMYVEEGRSLNKPVKWCYFADCFRYERPQKGRYRQFWQ 121
Query: 193 WNMDIIGVPAVTVLQEVL 210
+ ++IG + EV+
Sbjct: 122 FGAELIGADSAMGDAEVI 139
>sp|A7I940|SYH_METB6 Histidine--tRNA ligase OS=Methanoregula boonei (strain 6A8) GN=hisS
PE=3 SV=1
Length = 410
Score = 114 bits (286), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 81/138 (58%)
Query: 73 VNPPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQL 132
+ P+GTRDF P++M R + +E R FG+ EV P E LF ++GE I ++
Sbjct: 2 IQKPRGTRDFLPDEMEARRSIEAKMREAVRRFGYREVCTPEFEELELFTLRSGEGIMQEM 61
Query: 133 YCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQ 192
Y FED+G R++ALRPE+T ++ R+ I + K PL+W C+RYER +GR R+ +Q
Sbjct: 62 YVFEDKGGRKLALRPEITAAVIRMYINEAKVAPKPLRWCYFADCFRYERPQKGRYRQFWQ 121
Query: 193 WNMDIIGVPAVTVLQEVL 210
+ ++IG EV+
Sbjct: 122 FGAELIGADTALADAEVI 139
>sp|Q8TV61|SYH_METKA Histidine--tRNA ligase OS=Methanopyrus kandleri (strain AV19 / DSM
6324 / JCM 9639 / NBRC 100938) GN=hisS PE=3 SV=1
Length = 421
Score = 113 bits (283), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 116/228 (50%), Gaps = 38/228 (16%)
Query: 71 IDVNPPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRD 130
+ V PKGTRDF PE+MR R WL +V R +G+EEV P E LF K+GEEI +
Sbjct: 6 MKVERPKGTRDFTPEEMRARRWLERYLLDVFRSYGYEEVLTPTFEHAKLFEEKSGEEILE 65
Query: 131 QLYCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREH 190
++Y F+D+ R++ALRPE+T + R + K+ PLK + C+RYE+ RGR RE
Sbjct: 66 EMYVFKDKKGRKLALRPEMTAPVVRFYNAELKTRPHPLKLAYIVNCFRYEQPQRGRWREF 125
Query: 191 YQWNMDIIG------------------------------VPAVTVLQEVLRCHSIPEHLF 220
+Q +++ G V + +L+ +L + I E +
Sbjct: 126 WQAGVEVFGSDRPEADVEVIELTYRIFDGILPSGAFEVRVGHLGILRGLLEEYGIGEDVQ 185
Query: 221 GKVCIIIDKIEKLPLDVIKNDLKSAGMSEAAIEELLRVLSIKSLTELE 268
KV ++DK E LD +K L + +A L V++ +S +E+E
Sbjct: 186 NKVAHLVDKGE---LDEVKTLLPAEPAEKA-----LAVVTARSESEVE 225
>sp|Q58406|SYH_METJA Histidine--tRNA ligase OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=hisS PE=3 SV=1
Length = 416
Score = 113 bits (282), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 82/135 (60%)
Query: 76 PKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCF 135
P+GTRDF PE+M+ R ++ + +EV +G++E+ P ES L +K GEEIR QLY F
Sbjct: 8 PRGTRDFLPEEMKKRRFVENKLREVFERYGYKEILTPTFESFELIAKKTGEEIRKQLYVF 67
Query: 136 EDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNM 195
+D G R +ALRPE+T + R + + K++ PL+ + C+RYER GR RE +Q
Sbjct: 68 KDHGGREMALRPEMTSPVVRFYLNELKNLQKPLRLYYFANCFRYERPQAGRFREFWQMGC 127
Query: 196 DIIGVPAVTVLQEVL 210
++IG EVL
Sbjct: 128 ELIGCKEPLADAEVL 142
>sp|A6UQQ6|SYH_METVS Histidine--tRNA ligase OS=Methanococcus vannielii (strain SB / ATCC
35089 / DSM 1224) GN=hisS PE=3 SV=1
Length = 418
Score = 112 bits (281), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 77/135 (57%)
Query: 76 PKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCF 135
PKGTRDF P +M+ R + + + + F E++ P ES L +K GEEIR+QL+ F
Sbjct: 5 PKGTRDFLPVEMKKRKLIEKKLRNIFDSYNFSEINTPTFESFELLSKKTGEEIRNQLFVF 64
Query: 136 EDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNM 195
D GNR + LRPE T S+AR I + K+ P+K + G C+RYE GR RE +Q
Sbjct: 65 NDHGNREMGLRPEFTSSVARFYINEFKNTPKPVKMYYFGNCFRYENPQAGRYREFWQMGA 124
Query: 196 DIIGVPAVTVLQEVL 210
++IG EVL
Sbjct: 125 ELIGSNKSISDAEVL 139
>sp|A4G0V7|SYH_METM5 Histidine--tRNA ligase OS=Methanococcus maripaludis (strain C5 /
ATCC BAA-1333) GN=hisS PE=3 SV=1
Length = 418
Score = 111 bits (278), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 76/124 (61%)
Query: 76 PKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCF 135
PKGTRDF PE+M+ R + ++V + F E++ P ES L +K G+EIR QL+ F
Sbjct: 7 PKGTRDFLPEEMKKRKVIEKKLRKVFDSYNFSEINTPTFESFELLSKKTGDEIRTQLFVF 66
Query: 136 EDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNM 195
+D GNR + LRPELT S+AR I + K+ P+K + C+RYE GR RE +Q
Sbjct: 67 KDHGNREMGLRPELTSSVARFYINEFKNTPKPVKLYYFTNCFRYENPQAGRYREFWQMGS 126
Query: 196 DIIG 199
++IG
Sbjct: 127 ELIG 130
>sp|A9A947|SYH_METM6 Histidine--tRNA ligase OS=Methanococcus maripaludis (strain C6 /
ATCC BAA-1332) GN=hisS PE=3 SV=1
Length = 418
Score = 110 bits (276), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 76/124 (61%)
Query: 76 PKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCF 135
PKGTRDF PE+M+ R + ++V + F E++ P ES L +K GEEIR QL+ F
Sbjct: 7 PKGTRDFLPEEMKKRKNIEKKLRKVFDSYNFSEINTPTFESFELLSKKTGEEIRKQLFVF 66
Query: 136 EDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNM 195
+D G+R + LRPELT S+AR I + K+ P+K + C+RYE GR RE +Q
Sbjct: 67 KDHGDREMGLRPELTSSVARFYINEFKNTPKPVKLYYFTNCFRYENPQAGRYREFWQMGS 126
Query: 196 DIIG 199
++IG
Sbjct: 127 ELIG 130
>sp|A6LIF7|SYH_PARD8 Histidine--tRNA ligase OS=Parabacteroides distasonis (strain ATCC
8503 / DSM 20701 / NCTC 11152) GN=hisS PE=3 SV=1
Length = 451
Score = 110 bits (275), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 114/237 (48%), Gaps = 49/237 (20%)
Query: 76 PKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLY-- 133
PKGTRDF PE+M RN++F+ +EV L+GF++++ P +E+ + + K GEE L+
Sbjct: 7 PKGTRDFSPEEMAKRNYIFNTIREVFHLYGFQQIETPAMENLSTLMGKYGEEGDKLLFKI 66
Query: 134 -----CFEDRGNRRV---------------ALRPELTPSLARLVIQKGKSVSLPLKWFAV 173
CF + + LR +LT AR V+Q +S P K + +
Sbjct: 67 LNSGDCFAGISDEELMEKNPLRFAAKACEKGLRYDLTVPFARYVVQHRNEISFPFKRYQI 126
Query: 174 GQCWRYERMTRGRRREHYQWNMDIIGVPAVTVLQEVLRCHSIPEHLFG-KVCI------- 225
WR +R +GR RE YQ + D++G ++ E+++ H FG +VCI
Sbjct: 127 QPVWRADRPQKGRYREFYQCDGDVVGSDSLINEVELIQIMDEVFHRFGIRVCIKMNNRKI 186
Query: 226 -------------------IIDKIEKLPLDVIKNDLKSAGMSEAAIEELLRVLSIKS 263
IDK++K+ LD + +L+S G+ E AIE L ++ ++
Sbjct: 187 LSGIAEIIGEADKIVDITVAIDKLDKIGLDNVNEELRSKGLPEEAIERLQPIIMLQG 243
>sp|P60921|SYH_METMP Histidine--tRNA ligase OS=Methanococcus maripaludis (strain S2 /
LL) GN=hisS PE=3 SV=1
Length = 416
Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 75/124 (60%)
Query: 76 PKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCF 135
PKGTRDF PE+M+ R + ++V + F E++ P ES L +K G+EIR QL+ F
Sbjct: 5 PKGTRDFLPEEMKKRKTIEKKLRKVFDSYNFSEINTPTFESFELLSKKTGDEIRTQLFVF 64
Query: 136 EDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNM 195
D G+R + LRPELT S+AR I + K+ P+K + C+RYE GR RE +Q
Sbjct: 65 RDHGDREMGLRPELTSSVARFYINEFKNTPKPVKLYYFTNCFRYENPQAGRYREFWQMGS 124
Query: 196 DIIG 199
++IG
Sbjct: 125 ELIG 128
>sp|A6VHK3|SYH_METM7 Histidine--tRNA ligase OS=Methanococcus maripaludis (strain C7 /
ATCC BAA-1331) GN=hisS PE=3 SV=1
Length = 418
Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 76/124 (61%)
Query: 76 PKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCF 135
PKGTRDF PE+M+ R + ++V + F E++ P ES L +K G+EIR QL+ F
Sbjct: 7 PKGTRDFLPEEMKKRKVIEKKLRKVFDSYNFSEINTPTFESFELLSKKTGDEIRTQLFVF 66
Query: 136 EDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNM 195
+D G+R + LRPELT S+AR I + K+ P+K + C+RYE GR RE +Q
Sbjct: 67 KDHGDREMGLRPELTSSVARFYINEFKNTPKPVKLYYFTNCFRYENPQAGRYREFWQMGS 126
Query: 196 DIIG 199
++IG
Sbjct: 127 ELIG 130
>sp|Q6L1Q5|SYH_PICTO Histidine--tRNA ligase OS=Picrophilus torridus (strain ATCC 700027
/ DSM 9790 / JCM 10055 / NBRC 100828) GN=hisS PE=3 SV=1
Length = 423
Score = 108 bits (271), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 78/134 (58%), Gaps = 1/134 (0%)
Query: 77 KGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCFE 136
KG RD P+DM +R + + FG++ +DFP LES L+ K+G E+ +Q + F
Sbjct: 7 KGFRDHYPDDMEIRYDFIKKMMDTAISFGYKMIDFPSLESMDLYRLKSGTELVEQTFSFT 66
Query: 137 DRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNMD 196
D+G R V + PE TPS R++ + K + +P +WF++ + WRYE GR REH Q+N D
Sbjct: 67 DKGGREVTMIPEATPSTMRMLTSR-KDIKMPARWFSIPKVWRYEEPQEGRYREHIQFNAD 125
Query: 197 IIGVPAVTVLQEVL 210
+ G + E++
Sbjct: 126 MFGADSPEADAEII 139
>sp|A6UT01|SYH_META3 Histidine--tRNA ligase OS=Methanococcus aeolicus (strain Nankai-3 /
ATCC BAA-1280) GN=hisS PE=3 SV=1
Length = 418
Score = 108 bits (269), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 75/126 (59%)
Query: 74 NPPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLY 133
N PKGTRDF P +M+ R + + + V + F E++ P E L +K GE+IR QL+
Sbjct: 3 NRPKGTRDFAPSEMKKRKIIENKLKSVFMAYNFNEINTPTFEYFELLSKKTGEDIRKQLF 62
Query: 134 CFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQW 193
F+D GNR + LRPE+T S+ R I + K++ P K F C+RYE+ GR RE +Q
Sbjct: 63 VFKDHGNREMGLRPEITSSVVRFYINELKNLPKPQKLFYFANCFRYEQPQAGRYREFWQM 122
Query: 194 NMDIIG 199
+++G
Sbjct: 123 GCELLG 128
>sp|O28631|SYH_ARCFU Histidine--tRNA ligase OS=Archaeoglobus fulgidus (strain ATCC 49558
/ VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=hisS
PE=3 SV=1
Length = 409
Score = 107 bits (267), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 85/140 (60%)
Query: 71 IDVNPPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRD 130
+ + P+GTRDF P++M R + ++++ FG+ EV P E LF RK+GE I +
Sbjct: 1 MKIERPRGTRDFLPDEMERRREIEKRMRKIAESFGYREVATPTFEYLELFTRKSGEGIIE 60
Query: 131 QLYCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREH 190
++Y F+D+ R +ALRPELT + R+ + + + PL+++ C+RYER +GR RE
Sbjct: 61 EMYVFKDKSGRDLALRPELTAPVMRMFVNECSVMPKPLRFYYFANCFRYERPQKGRYREF 120
Query: 191 YQWNMDIIGVPAVTVLQEVL 210
+Q+ +++IG + EV+
Sbjct: 121 WQFGVELIGSESYLADAEVI 140
>sp|O26346|SYH_METTH Histidine--tRNA ligase OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=hisS PE=3 SV=2
Length = 425
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 109/215 (50%), Gaps = 29/215 (13%)
Query: 71 IDVNPPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRD 130
+D++ P+GTRDF +MR R + + +G+ E+ P+ E LF K+GEE+ +
Sbjct: 1 MDISRPRGTRDFLFAEMRNRKEVEGVLRRTFETYGYHEIKTPIFEELKLFTVKSGEEVVN 60
Query: 131 QLYCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREH 190
Q+Y F D+G R +ALRPELT +ARL + + + P+K + G C+RYER GR R+
Sbjct: 61 QIYHFTDKGGRELALRPELTAPVARLYMNEMQKKPKPIKMYYFGSCFRYERPQAGRFRQF 120
Query: 191 YQWNMDIIG-----------------------------VPAVTVLQEVLRCHSIPEHLFG 221
+Q+ ++IG + + +L+ +L IP L
Sbjct: 121 WQFGCELIGGRSPLAEAEVISLASESLHELGLDGFEVHIGHLGILRGILGREEIPSELQD 180
Query: 222 KVCIIIDKIEKLPLDVIKNDLKSAGMSEAAIEELL 256
++ +IDK + L+ + +++ +G S + +L+
Sbjct: 181 RIMGVIDKGDVEELEALLGEVEVSGESRELLMKLI 215
>sp|A4YJ03|SYH_METS5 Histidine--tRNA ligase OS=Metallosphaera sedula (strain ATCC 51363
/ DSM 5348) GN=hisS PE=3 SV=1
Length = 430
Score = 105 bits (261), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 82/142 (57%)
Query: 71 IDVNPPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRD 130
+ P +G D+ D ++ W+ NF+E G++E P++E LF K GEE+R+
Sbjct: 2 VSYEPMRGMEDYFDVDSKIIRWIESNFRETVEKAGYKEAMTPIVEDFELFSLKGGEELRN 61
Query: 131 QLYCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREH 190
+Y F+D+G R VALRPE+TPS+ RL + + PL+ F +G+ +RY+ +GR RE
Sbjct: 62 TMYVFKDKGEREVALRPEITPSIVRLYLNSLQHYPKPLRIFYIGRVYRYDEPQQGRYREF 121
Query: 191 YQWNMDIIGVPAVTVLQEVLRC 212
Q ++++G ++ EVL
Sbjct: 122 RQAGVELLGSDSILADIEVLHL 143
>sp|A3CVW4|SYH_METMJ Histidine--tRNA ligase OS=Methanoculleus marisnigri (strain ATCC
35101 / DSM 1498 / JR1) GN=hisS PE=3 SV=1
Length = 410
Score = 105 bits (261), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 85/138 (61%)
Query: 73 VNPPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQL 132
+ P+GTRDF P++M R + ++ +R +G+ EV P E LF K+GE I ++
Sbjct: 2 LQKPRGTRDFLPDEMERRRLIERRMRDAARRWGYREVCTPDFEHLELFTMKSGEGIIQEM 61
Query: 133 YCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQ 192
Y FED+G R++ LRPE+T ++ R+ + +GK + PL+W C+RYER +GR R+ +Q
Sbjct: 62 YVFEDKGGRKMTLRPEVTAAVLRMYVNEGKVLPKPLRWCYFADCFRYERPQKGRYRQFWQ 121
Query: 193 WNMDIIGVPAVTVLQEVL 210
+ +++IG + EV+
Sbjct: 122 FGVELIGADTASADAEVI 139
>sp|Q8TS62|SYH_METAC Histidine--tRNA ligase OS=Methanosarcina acetivorans (strain ATCC
35395 / DSM 2834 / JCM 12185 / C2A) GN=hisS PE=3 SV=1
Length = 413
Score = 104 bits (260), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 106/198 (53%), Gaps = 6/198 (3%)
Query: 71 IDVNPPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRD 130
+ VN P+GTRDF P D R ++ + V R +G+ E+ P E LF K+GE I
Sbjct: 1 MTVNRPRGTRDFLPADTARRRYVESVMRNVVRNWGYSEIITPTFEHLDLFTLKSGEGIVG 60
Query: 131 QLYCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREH 190
+LY F D+G R + LRPELT + RL + + + PLK F C+RYER +GR RE
Sbjct: 61 ELYNFTDKGGRDMTLRPELTAPVMRLYVNELQPFPKPLKLFYFENCFRYERPQKGRFREF 120
Query: 191 YQWNMDIIGVPAVTVLQEVLRCHSIPEHLFGKVCIIIDKIEKLPLDVIKNDLKSAGMSEA 250
+Q+ +++IG EV+ ++ + L V I D ++ L VI+ LK G+
Sbjct: 121 WQFGVELIGSGKSDSDAEVI---ALADALLKAVGIQGD-MKLGNLAVIRTLLK--GLEPE 174
Query: 251 AIEELLRVLSIKSLTELE 268
+ +++R++ K LE
Sbjct: 175 IVSKVMRLVDKKEYAGLE 192
>sp|Q4UM71|SYH_RICFE Histidine--tRNA ligase OS=Rickettsia felis (strain ATCC VR-1525 /
URRWXCal2) GN=hisS PE=3 SV=1
Length = 415
Score = 103 bits (257), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 80/142 (56%), Gaps = 3/142 (2%)
Query: 73 VNPPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEE---IR 129
+ P +G +D P+D ++ +++ + ++V L+G++++ P+LE +F R GE I
Sbjct: 5 LQPLRGMKDLLPDDYKVHDYIINKARDVGVLYGYKQMSIPILEYTKVFNRSMGESSDVIS 64
Query: 130 DQLYCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRRE 189
++Y F D+ N VALRPE T + R I G LPLK+F+ G +RY+R GR+R+
Sbjct: 65 KEIYSFLDKSNESVALRPEFTAGIIRSFISNGLQHKLPLKFFSTGPVFRYDRPQAGRQRQ 124
Query: 190 HYQWNMDIIGVPAVTVLQEVLR 211
+Q N + IG E L+
Sbjct: 125 FHQLNYEYIGAKGAITDAETLK 146
>sp|Q7VF68|SYH_HELHP Histidine--tRNA ligase OS=Helicobacter hepaticus (strain ATCC 51449
/ 3B1) GN=hisS PE=3 SV=1
Length = 442
Score = 102 bits (254), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 104/225 (46%), Gaps = 31/225 (13%)
Query: 78 GTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCFED 137
G +D P++ + L + V FGF ++ P LE + I++ +EI+ +LY F+D
Sbjct: 11 GFKDRLPKEALAKAHLLNKVSNVFMNFGFVPIETPHLEYADVLIKQGSDEIQKELYRFKD 70
Query: 138 RGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNMDI 197
G R VALR +LT LAR V Q V LP K +A+G +R ER RGR RE Q + D
Sbjct: 71 HGGRDVALRFDLTVPLARFVSQYKNEVGLPFKRYAIGNVFRGERAQRGRYREFTQCDFDF 130
Query: 198 IGVPAVTVLQEVLR------------------------------CHSIPEHLFGKVCIII 227
IG +++ E+L+ C E II
Sbjct: 131 IGSDSISCDAEILQVIYASLMKLGIEEFTIWLNHRSILNGICEYCGITQEKDINVALRII 190
Query: 228 DKIEKLPLDVIKNDL-KSAGMSEAAIEELLRVLSIKSLTELEGWF 271
DK++K+ + + +L K G++ +E LL SIK E E +F
Sbjct: 191 DKLDKIGKERVSEELQKELGLNNNQVENLLEYTSIKQQGESESFF 235
>sp|Q1RJ50|SYH_RICBR Histidine--tRNA ligase OS=Rickettsia bellii (strain RML369-C)
GN=hisS PE=3 SV=1
Length = 415
Score = 101 bits (252), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 82/151 (54%), Gaps = 8/151 (5%)
Query: 64 VSDDLQKIDVNPPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRK 123
++D LQ P +G +D P+D ++ +++ +EV L+G++++ P+LE +F R
Sbjct: 1 MTDKLQ-----PLRGMKDLLPDDYKVHDYIIKKAKEVGELYGYKQMSTPILEYTKVFNRS 55
Query: 124 AGEE---IRDQLYCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYE 180
GE I ++Y F D+ + VALRPE T + R I G LPLK F+ G +RY+
Sbjct: 56 MGESSDVISKEIYSFLDKSDESVALRPEFTAGIVRAFISNGLQHKLPLKLFSTGPVFRYD 115
Query: 181 RMTRGRRREHYQWNMDIIGVPAVTVLQEVLR 211
R GR+R+ +Q N + +G E L+
Sbjct: 116 RPQAGRQRQFHQLNYEYLGAKGAISDAETLK 146
>sp|A8GVU9|SYH_RICB8 Histidine--tRNA ligase OS=Rickettsia bellii (strain OSU 85-389)
GN=hisS PE=3 SV=1
Length = 415
Score = 101 bits (252), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 82/151 (54%), Gaps = 8/151 (5%)
Query: 64 VSDDLQKIDVNPPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRK 123
++D LQ P +G +D P+D ++ +++ +EV L+G++++ P+LE +F R
Sbjct: 1 MTDKLQ-----PLRGMKDLLPDDYKVHDYIIKKAKEVGELYGYKQMSTPILEYTKVFNRS 55
Query: 124 AGEE---IRDQLYCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYE 180
GE I ++Y F D+ + VALRPE T + R I G LPLK F+ G +RY+
Sbjct: 56 MGESSDVISKEIYSFLDKSDESVALRPEFTAGIVRAFISNGLQHKLPLKLFSTGPVFRYD 115
Query: 181 RMTRGRRREHYQWNMDIIGVPAVTVLQEVLR 211
R GR+R+ +Q N + +G E L+
Sbjct: 116 RPQAGRQRQFHQLNYEYLGAKGAISDAETLK 146
>sp|Q5FUR8|SYH_GLUOX Histidine--tRNA ligase OS=Gluconobacter oxydans (strain 621H)
GN=hisS PE=3 SV=1
Length = 415
Score = 101 bits (252), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 84/157 (53%), Gaps = 10/157 (6%)
Query: 73 VNPPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEE---IR 129
+ PP+GT D E MR + + + V R +GFEE P+ E +F R GE +
Sbjct: 4 LQPPRGTHDLIGETMRRHHHVVETARRVLRTYGFEEWSTPIFEDTRVFSRTLGETSDVVS 63
Query: 130 DQLYCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRRE 189
++Y FEDRG + LRPE T ++ R ++ G + SLP K F G +RYER +GR R+
Sbjct: 64 KEMYTFEDRGGESITLRPEGTAAICRALVTNGLTQSLPQKVFYHGSMFRYERPQKGRYRQ 123
Query: 190 HYQWNMDIIGVPA-------VTVLQEVLRCHSIPEHL 219
+Q ++IG + + + Q++LR + +H+
Sbjct: 124 FHQIGAELIGAESPLRDAETIAMAQDILRELGLGDHV 160
>sp|Q8PVB0|SYH_METMA Histidine--tRNA ligase OS=Methanosarcina mazei (strain ATCC BAA-159
/ DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) GN=hisS
PE=3 SV=1
Length = 411
Score = 101 bits (251), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 100/195 (51%), Gaps = 9/195 (4%)
Query: 71 IDVNPPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRD 130
+ VN P+GTRDF P D R ++ + V +G+ E+ P E LF K+GE I
Sbjct: 1 MSVNRPRGTRDFLPADTARRRYVESVMRNVVLNWGYSEIITPTFEHLDLFTLKSGEGIIG 60
Query: 131 QLYCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREH 190
+LY F D+G R + LRPELT + R + + + PLK F C+RYER +GR RE
Sbjct: 61 ELYNFTDKGGREMTLRPELTAPVMRFYVNELQPFPKPLKLFYFENCFRYERPQKGRFREF 120
Query: 191 YQWNMDIIG-------VPAVTVLQEVLRCHSIPEHL-FGKVCIIIDKIEKLPLDVIKNDL 242
+Q+ +++IG + + +L+ I + G + +I ++ L +++ N +
Sbjct: 121 WQFGVELIGSGKSDSDAEVIALASALLKAVGIKGDMKLGNLAVIRTLLKGLEPEIVSNVM 180
Query: 243 KSAGMSE-AAIEELL 256
+ E A +E LL
Sbjct: 181 RLVDKKEYAGLEALL 195
>sp|A8GMY5|SYH_RICAH Histidine--tRNA ligase OS=Rickettsia akari (strain Hartford)
GN=hisS PE=3 SV=1
Length = 415
Score = 101 bits (251), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 78/142 (54%), Gaps = 3/142 (2%)
Query: 73 VNPPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEE---IR 129
+ P +G +D P+D ++ +++ ++V L+G++++ P+LE +F R GE I
Sbjct: 5 LQPLRGIKDLLPDDYKVHDYIISKARDVGVLYGYKQMSTPILEYTKVFNRSMGESSDVIS 64
Query: 130 DQLYCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRRE 189
++Y F D+ N VALRPE T + R I G LPLK F+ G +RY+R GR+R+
Sbjct: 65 KEIYSFLDKSNESVALRPEFTAGIIRSFISNGLQHKLPLKLFSTGPVFRYDRPQAGRQRQ 124
Query: 190 HYQWNMDIIGVPAVTVLQEVLR 211
+Q N + IG E L+
Sbjct: 125 FHQLNYEYIGAKGAITDAETLK 146
>sp|Q9ZDL9|SYH_RICPR Histidine--tRNA ligase OS=Rickettsia prowazekii (strain Madrid E)
GN=hisS PE=3 SV=2
Length = 413
Score = 101 bits (251), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 80/143 (55%), Gaps = 3/143 (2%)
Query: 72 DVNPPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEE---I 128
++ P +G +D P D ++ N++ + ++V L+G++++ P+LE +F R GE +
Sbjct: 4 NLQPLRGMKDLLPNDYQIHNYIINKARDVGALYGYKQMSTPILEYTKVFNRSMGESSDVM 63
Query: 129 RDQLYCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRR 188
++Y F D+ N VALRPE T + R I G LPLK+F+ G +RY+R GR+R
Sbjct: 64 SKEIYSFVDKSNNAVALRPEFTSGIIRSFISNGLQHKLPLKFFSTGPVFRYDRPQAGRQR 123
Query: 189 EHYQWNMDIIGVPAVTVLQEVLR 211
+ +Q N + +G E ++
Sbjct: 124 QFHQLNYEYLGAKGAITDAETVK 146
>sp|Q7MTB3|SYH_PORGI Histidine--tRNA ligase OS=Porphyromonas gingivalis (strain ATCC
BAA-308 / W83) GN=hisS PE=3 SV=1
Length = 454
Score = 100 bits (250), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 104/230 (45%), Gaps = 51/230 (22%)
Query: 76 PKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQL--- 132
PKG RDF P +M RN++F +EV LFGF +++ P +E + + K GEE D+L
Sbjct: 7 PKGMRDFSPVEMSRRNYIFDTIREVYELFGFNQIETPTMEMLSTLMGKYGEE-GDRLLFK 65
Query: 133 ----------YCFEDRGNRRV----------ALRPELTPSLARLVIQKGKSVSLPLKWFA 172
+C E+ + LR +LT AR V+ ++ P K +
Sbjct: 66 VLNSGDVLADFCAEELAEKNSLRFAAKACEKGLRYDLTVPFARYVVMHRNEINFPFKRYQ 125
Query: 173 VGQCWRYERMTRGRRREHYQWNMDIIG-------VPAVTVLQEVLRCHSIPEHL------ 219
+ WR +R +GR RE YQ + D+IG V + ++ EV R I +
Sbjct: 126 IQPVWRADRPQKGRYREFYQCDGDVIGSDSLMNEVELIQIISEVFRRLGIRTRILLNNRK 185
Query: 220 --------------FGKVCIIIDKIEKLPLDVIKNDLKSAGMSEAAIEEL 255
+ + IDK++K+ LD + ++L++ G E AIE L
Sbjct: 186 ILSGIAEVVDEADRLTDITVAIDKLDKIGLDKVNDELRTKGFGEEAIERL 235
>sp|Q4JAY2|SYH_SULAC Histidine--tRNA ligase OS=Sulfolobus acidocaldarius (strain ATCC
33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
GN=hisS PE=3 SV=1
Length = 428
Score = 100 bits (248), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 84/142 (59%), Gaps = 7/142 (4%)
Query: 75 PPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYC 134
P +G +D+ E++ ++ F+ V G++EV P++E LF K+GEEIR +Y
Sbjct: 6 PIRGMKDYYGEELNKIKFIEETFRTVVLNSGYQEVYTPIVEDFKLFSLKSGEEIRKTMYV 65
Query: 135 FEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWN 194
F+D+ +R VALRPE+TPS+ R+ + + + PL+ F VGQ +RY+ GR RE Q
Sbjct: 66 FKDKADREVALRPEITPSIVRVYLNSMQHLPKPLRLFYVGQVYRYDEPQFGRYREFRQAG 125
Query: 195 MDIIG-------VPAVTVLQEV 209
++++G + +++L E+
Sbjct: 126 VELLGSSSSFADIEVISLLNEI 147
>sp|A8EZE6|SYH_RICCK Histidine--tRNA ligase OS=Rickettsia canadensis (strain McKiel)
GN=hisS PE=3 SV=1
Length = 415
Score = 99.4 bits (246), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 79/142 (55%), Gaps = 3/142 (2%)
Query: 73 VNPPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEE---IR 129
+ P +G +D P+D ++ +++ + ++V L+G++++ P+LE +F R GE I
Sbjct: 5 LQPLRGMKDLLPDDYKVHDYIINKARDVGVLYGYKQMSTPILEYTKVFNRSMGESSDIIS 64
Query: 130 DQLYCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRRE 189
++Y F D+ N VALRPE T + R I LPLK+F+ G +RY+R GR+R+
Sbjct: 65 KEIYSFLDKSNESVALRPEFTAGIIRSFISNNLRHKLPLKFFSTGPIFRYDRPQAGRQRQ 124
Query: 190 HYQWNMDIIGVPAVTVLQEVLR 211
+Q N + IG E L+
Sbjct: 125 FHQLNYEYIGAKGAMTDAETLK 146
>sp|Q980L3|SYH_SULSO Histidine--tRNA ligase OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=hisS PE=3 SV=1
Length = 426
Score = 99.4 bits (246), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 80/134 (59%)
Query: 77 KGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCFE 136
+G +D+ D +L F+++++ +G+ E+ PV+E LF K GEE+R +Y F+
Sbjct: 8 RGMKDYIGIDAEKIRYLESTFRDLAKKYGYSEIITPVVEEFKLFELKGGEELRQTMYVFK 67
Query: 137 DRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNMD 196
D+ +R ++LRPE+TPS+AR IQ +S P++ F G +RY+ GR RE Q ++
Sbjct: 68 DKADREISLRPEITPSVARAYIQNLQSSPKPIRLFYFGTVYRYDEPQYGRYREFRQAGIE 127
Query: 197 IIGVPAVTVLQEVL 210
+IG ++ EVL
Sbjct: 128 MIGDSSILADVEVL 141
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.138 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 103,961,324
Number of Sequences: 539616
Number of extensions: 4572810
Number of successful extensions: 12439
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 738
Number of HSP's successfully gapped in prelim test: 172
Number of HSP's that attempted gapping in prelim test: 10641
Number of HSP's gapped (non-prelim): 971
length of query: 271
length of database: 191,569,459
effective HSP length: 116
effective length of query: 155
effective length of database: 128,974,003
effective search space: 19990970465
effective search space used: 19990970465
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)