BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024195
(271 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9CAR7|HIR2_ARATH Hypersensitive-induced response protein 2 OS=Arabidopsis thaliana
GN=HIR2 PE=1 SV=1
Length = 286
Score = 508 bits (1307), Expect = e-143, Method: Compositional matrix adjust.
Identities = 245/283 (86%), Positives = 258/283 (91%), Gaps = 14/283 (4%)
Query: 1 MGQALGCIQVDQSTVAIKETFGKFDDVLEPGCHCLPWCLGSQVAGQLSLRVQQLDVRCET 60
MGQALGCIQVDQS VAIKETFGKFD+VLEPGCHCLPWCLGSQVAG LSLRVQQLDVRCET
Sbjct: 1 MGQALGCIQVDQSNVAIKETFGKFDEVLEPGCHCLPWCLGSQVAGHLSLRVQQLDVRCET 60
Query: 61 KTKDNVFVNVVASVQYRALAEKASDAFYKLSNTRSQIQAYVFDVIRASVPKLDLDATFEQ 120
KTKDNVFV VVAS+QYRALAE A DAFYKLSNTR+QIQAYVFDVIRASVPKLDLD+TFEQ
Sbjct: 61 KTKDNVFVTVVASIQYRALAESAQDAFYKLSNTRNQIQAYVFDVIRASVPKLDLDSTFEQ 120
Query: 121 KNDIAKAVEEELEKAMSHYGYEIVQTLIVDIEPDEHVKRAMNEINAEK------------ 168
KNDIAK VE ELEKAMSHYGYEIVQTLIVDIEPD HVKRAMNEINA
Sbjct: 121 KNDIAKTVETELEKAMSHYGYEIVQTLIVDIEPDVHVKRAMNEINAASRMREAASEKAEA 180
Query: 169 --ILQIKRAEGEAESKYLAGLGIARQRQAIVDGLRDSVLAFSENVPGTSSKDVMDMVLVT 226
ILQIKRAEGEAESKYL+G+GIARQRQAIVDGLR+SVLAFSE+VPGTSSKDVMDMVLVT
Sbjct: 181 EKILQIKRAEGEAESKYLSGMGIARQRQAIVDGLRNSVLAFSESVPGTSSKDVMDMVLVT 240
Query: 227 QYFDTMKEIGASSKTNSVFIPHGPGAVKDIASQIREGLLQANA 269
QYFDT+KEIGASSK+NSVFIPHGPGAV+DIASQIR+GLLQ N+
Sbjct: 241 QYFDTLKEIGASSKSNSVFIPHGPGAVRDIASQIRDGLLQGNS 283
>sp|Q9FM19|HIR1_ARATH Hypersensitive-induced response protein 1 OS=Arabidopsis thaliana
GN=HIR1 PE=1 SV=1
Length = 286
Score = 487 bits (1254), Expect = e-137, Method: Compositional matrix adjust.
Identities = 237/285 (83%), Positives = 254/285 (89%), Gaps = 14/285 (4%)
Query: 1 MGQALGCIQVDQSTVAIKETFGKFDDVLEPGCHCLPWCLGSQVAGQLSLRVQQLDVRCET 60
MG C+QVDQSTVAIKETFGKF+DVLEPGCH LPWCLGSQVAG LSLRVQQLDVRCET
Sbjct: 1 MGNLFCCVQVDQSTVAIKETFGKFEDVLEPGCHFLPWCLGSQVAGYLSLRVQQLDVRCET 60
Query: 61 KTKDNVFVNVVASVQYRALAEKASDAFYKLSNTRSQIQAYVFDVIRASVPKLDLDATFEQ 120
KTKDNVFVNVVAS+QYRALA KA+DA+YKLSNTR QIQAYVFDVIRASVPKL LD FEQ
Sbjct: 61 KTKDNVFVNVVASIQYRALANKANDAYYKLSNTRGQIQAYVFDVIRASVPKLLLDDVFEQ 120
Query: 121 KNDIAKAVEEELEKAMSHYGYEIVQTLIVDIEPDEHVKRAMNEIN--------------A 166
KNDIAKAVEEELEKAMS YGYEIVQTLIVDIEPDEHVKRAMNEIN A
Sbjct: 121 KNDIAKAVEEELEKAMSAYGYEIVQTLIVDIEPDEHVKRAMNEINAAARMRLAANEKAEA 180
Query: 167 EKILQIKRAEGEAESKYLAGLGIARQRQAIVDGLRDSVLAFSENVPGTSSKDVMDMVLVT 226
EKILQIKRAEGEAESKYL+GLGIARQRQAIVDGLRDSVL F+ NVPGT++KDVMDMVLVT
Sbjct: 181 EKILQIKRAEGEAESKYLSGLGIARQRQAIVDGLRDSVLGFAVNVPGTTAKDVMDMVLVT 240
Query: 227 QYFDTMKEIGASSKTNSVFIPHGPGAVKDIASQIREGLLQANATT 271
QYFDTMKEIGASSK+++VFIPHGPGAV+D+ASQIR+GLLQ ++
Sbjct: 241 QYFDTMKEIGASSKSSAVFIPHGPGAVRDVASQIRDGLLQGSSAN 285
>sp|Q9SRH6|HIR3_ARATH Hypersensitive-induced response protein 3 OS=Arabidopsis thaliana
GN=HIR3 PE=1 SV=1
Length = 285
Score = 424 bits (1089), Expect = e-118, Method: Compositional matrix adjust.
Identities = 202/282 (71%), Positives = 237/282 (84%), Gaps = 14/282 (4%)
Query: 1 MGQALGCIQVDQSTVAIKETFGKFDDVLEPGCHCLPWCLGSQVAGQLSLRVQQLDVRCET 60
MG C+ V QS VA+KE FGKF VL PG +PW +G VAG L+LR+QQLDV+CET
Sbjct: 1 MGNLFCCVLVKQSDVAVKERFGKFQKVLNPGLQFVPWVIGDYVAGTLTLRLQQLDVQCET 60
Query: 61 KTKDNVFVNVVASVQYRALAEKASDAFYKLSNTRSQIQAYVFDVIRASVPKLDLDATFEQ 120
KTKDNVFV VVAS+QYR LA+KASDAFY+LSN +QI+AYVFDVIRA VPKL+LD FEQ
Sbjct: 61 KTKDNVFVTVVASIQYRVLADKASDAFYRLSNPTTQIKAYVFDVIRACVPKLNLDDVFEQ 120
Query: 121 KNDIAKAVEEELEKAMSHYGYEIVQTLIVDIEPDEHVKRAMNEIN--------------A 166
KN+IAK+VEEEL+KAM+ YGYEI+QTLI+DIEPD+ VKRAMNEIN A
Sbjct: 121 KNEIAKSVEEELDKAMTAYGYEILQTLIIDIEPDQQVKRAMNEINAAARMRVAASEKAEA 180
Query: 167 EKILQIKRAEGEAESKYLAGLGIARQRQAIVDGLRDSVLAFSENVPGTSSKDVMDMVLVT 226
EKI+QIKRAEGEAESKYL+GLGIARQRQAIVDGLRDSVL F+ NVPGTS+KDV+DMV++T
Sbjct: 181 EKIIQIKRAEGEAESKYLSGLGIARQRQAIVDGLRDSVLGFAGNVPGTSAKDVLDMVMMT 240
Query: 227 QYFDTMKEIGASSKTNSVFIPHGPGAVKDIASQIREGLLQAN 268
QYFDTM++IGA+SK+++VFIPHGPGAV D+A+QIR GLLQAN
Sbjct: 241 QYFDTMRDIGATSKSSAVFIPHGPGAVSDVAAQIRNGLLQAN 282
>sp|Q9FHM7|HIR4_ARATH Hypersensitive-induced response protein 4 OS=Arabidopsis thaliana
GN=HIR4 PE=1 SV=1
Length = 292
Score = 331 bits (848), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 157/280 (56%), Positives = 208/280 (74%), Gaps = 16/280 (5%)
Query: 6 GCIQVDQSTVAIKETFGKFDDVLEPGCHCLPWCLGSQVAGQLSLRVQQLDVRCETKTKDN 65
GCI+ Q++V + E +G+F+ + EPGCH G +AG LS R++ LDV+ ETKTKDN
Sbjct: 10 GCIE--QASVGVVERWGRFEHIAEPGCHFFNPLAGQWLAGVLSTRIKSLDVKIETKTKDN 67
Query: 66 VFVNVVASVQYRALAEKASDAFYKLSNTRSQIQAYVFDVIRASVPKLDLDATFEQKNDIA 125
VFV +V S+QYR + A DAFY+L N + QIQAYVFDV+RA VP + LDA FEQK ++A
Sbjct: 68 VFVQLVCSIQYRVVKASADDAFYELQNPKEQIQAYVFDVVRALVPMMTLDALFEQKGEVA 127
Query: 126 KAVEEELEKAMSHYGYEIVQTLIVDIEPDEHVKRAMNEIN--------------AEKILQ 171
K+V EELEK M YGY I L+VDI PD V++AMNEIN AEKILQ
Sbjct: 128 KSVLEELEKVMGAYGYSIEHILMVDIIPDPSVRKAMNEINAAQRLQLASVYKGEAEKILQ 187
Query: 172 IKRAEGEAESKYLAGLGIARQRQAIVDGLRDSVLAFSENVPGTSSKDVMDMVLVTQYFDT 231
+KRAE EAE+KYL G+G+ARQRQAI DGLR+++L FS+ V GTS+K+VMD++++TQYFDT
Sbjct: 188 VKRAEAEAEAKYLGGVGVARQRQAITDGLRENILNFSDKVEGTSAKEVMDLIMITQYFDT 247
Query: 232 MKEIGASSKTNSVFIPHGPGAVKDIASQIREGLLQANATT 271
++++G SSK +VF+PHGPG V+DI+ QIR G+++A A+T
Sbjct: 248 IRDLGNSSKNTTVFLPHGPGHVRDISDQIRNGMMEAAAST 287
>sp|P16148|PLZ12_LUPPO Protein PPLZ12 OS=Lupinus polyphyllus GN=PPLZ12 PE=2 SV=1
Length = 184
Score = 211 bits (538), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 100/170 (58%), Positives = 129/170 (75%), Gaps = 14/170 (8%)
Query: 112 LDLDATFEQKNDIAKAVEEELEKAMSHYGYEIVQTLIVDIEPDEHVKRAMNEINA----- 166
++LD FEQK ++AK+V EELEK M YGY I L+VDI PD+ V+RAMNEINA
Sbjct: 1 MNLDDLFEQKGEVAKSVLEELEKVMGEYGYNIEHILMVDIIPDDSVRRAMNEINAAQRMQ 60
Query: 167 ---------EKILQIKRAEGEAESKYLAGLGIARQRQAIVDGLRDSVLAFSENVPGTSSK 217
EKILQ+KRAE EAE+KYL G+G+ARQRQAI DGLR+++L FS V GTS+K
Sbjct: 61 LASLYKGEAEKILQVKRAEAEAEAKYLGGVGVARQRQAITDGLRENILNFSHKVEGTSAK 120
Query: 218 DVMDMVLVTQYFDTMKEIGASSKTNSVFIPHGPGAVKDIASQIREGLLQA 267
+VMD++++TQYFDT+K++G SSK +VFIPHGPG V+DI QIR GL+++
Sbjct: 121 EVMDLIMITQYFDTIKDLGNSSKNTTVFIPHGPGHVRDIGEQIRNGLMES 170
>sp|P72655|Y1128_SYNY3 Uncharacterized protein slr1128 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=slr1128 PE=3 SV=1
Length = 321
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 130/276 (47%), Gaps = 36/276 (13%)
Query: 2 GQALGCIQ--VDQSTVAIKETFGKFDDVLEPGCHCLPWCLGSQVAGQLSLRVQQLDVRCE 59
G A+G V++ + E G ++ L PG + L V Q + R + +D+ +
Sbjct: 13 GSAIGTSVKIVNEKNEYLVERLGSYNKKLTPGLNFTVPILDRVVFKQTT-REKVIDIPPQ 71
Query: 60 T-KTKDNVFVNVVASVQYRALAEKASDAFYKLSNTRSQIQAYVFDVIRASVPKLDLDATF 118
+ TKDNV + A V +R + A+YK+ N +S + V IR+ + KL+LD TF
Sbjct: 72 SCITKDNVAITADAVVYWRII--DMEKAYYKVENLQSAMVNLVLTQIRSEIGKLELDQTF 129
Query: 119 EQKNDIAKAVEEELEKAMSHYGYEIVQTLIVDIEPDEHVKRAMN-EINAEK-----ILQ- 171
+ +I + + EL+ + +G ++ + + DI P + V +M ++ AE+ IL
Sbjct: 130 TARTEINELLLRELDISTDPWGVKVTRVELRDIMPSKAVLDSMELQMTAERKKRAAILTS 189
Query: 172 -------IKRAEGEAESKYLAGLGIARQRQAIVD-------------GLRDSVLAFSENV 211
I A+G+A+++ L A+++ AI++ +++ +E +
Sbjct: 190 EGQRDSAINSAQGDAQARVLEAE--AKKKAAILNAEAEQQKKVLEAKATAEALSILTEKL 247
Query: 212 PGTS-SKDVMDMVLVTQYFDTMKEIGASSKTNSVFI 246
+ +++ + +L QY + IG+S + +F+
Sbjct: 248 SSDNHAREALQFLLAQQYLNMGTTIGSSDSSKVMFL 283
>sp|P0DKS0|QMCA_WIGBR Protein QmcA OS=Wigglesworthia glossinidia brevipalpis GN=qmcA PE=3
SV=1
Length = 313
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 120/268 (44%), Gaps = 41/268 (15%)
Query: 19 ETFGKFDDVLEPGCH-CLPWCLGSQVAGQLSLRVQQLDVRCE---TKTKDNVFVNVVASV 74
E FGK+ + L PG + +P+ ++ ++++ + +D+ + +K NV ++ + +
Sbjct: 30 ERFGKYIETLNPGINFIIPFV--DRIGHKINMMERVIDIPSQEIISKDNANVTIDAICFI 87
Query: 75 QYRALAEKASDAFYKLSNTRSQIQAYVFDVIRASVPKLDLDATFEQKNDIAKAVEEELEK 134
Q A++A Y++SN I +R + ++LD Q+++I + +++
Sbjct: 88 QIT----NANNAAYRVSNLEIAIINLTMTNMRTVLGNMELDEMLSQRDNINIQLLNIVDE 143
Query: 135 AMSHYGYEIVQTLIVDIEPDEHVKRAMNE------------INAEKILQ--IKRAEGEAE 180
A +G +I + I DI P + +MN + AE I Q I +AEGE +
Sbjct: 144 ATKPWGVKITRVEIKDIRPPAELIESMNAQMKAERTKRADILEAEGIRQAAILKAEGEKQ 203
Query: 181 SKYLAGLGIARQRQAIVDGLRDSVLAFSE------NVPGTSSKDVMDMV----------- 223
S+ L G + + +G R S SE S+K + D +
Sbjct: 204 SQILKAEGEKQSQILKAEGERQSEFLKSEAKERDSEAEAYSTKIISDAISSGNMNSIKYF 263
Query: 224 LVTQYFDTMKEIGASSKTNSVFIPHGPG 251
+ +Y + +KE+G+S+ + + +P G
Sbjct: 264 IAKKYTNAIKELGSSNSSKVIMLPLNTG 291
>sp|P0AA56|QMCA_SHIFL Protein QmcA OS=Shigella flexneri GN=qmcA PE=3 SV=1
Length = 305
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 119/256 (46%), Gaps = 36/256 (14%)
Query: 19 ETFGKFDDVLEPGCH-CLPWCLGSQVAGQLSLRVQQLDVRC-ETKTKDNVFVNVVASVQY 76
E FG++ L+PG +P+ ++ ++++ Q LD+ E +KDN V + A
Sbjct: 32 ERFGRYTKTLQPGLSLVVPFM--DRIGRKINMMEQVLDIPSQEVISKDNANVTIDAVCFI 89
Query: 77 RALAEKASDAFYKLSNTRSQIQAYVFDVIRASVPKLDLDATFEQKNDIAKAVEEELEKAM 136
+ + A A Y++SN I IR + ++LD Q++ I + +++A
Sbjct: 90 QVI--DAPRAAYEVSNLELAIINLTMTNIRTVLGSMELDEMLSQRDSINSRLLRIVDEAT 147
Query: 137 SHYGYEIVQTLIVDIEPDEHVKRAMNE------------INAEKILQ--IKRAEGEAESK 182
+ +G ++ + I D+ P + +MN + AE I Q I +AEGE +S+
Sbjct: 148 NPWGIKVTRIEIRDVRPPAELISSMNAQMKAERTKRAYILEAEGIRQAEILKAEGEKQSQ 207
Query: 183 YLAGLG---------IARQRQAIVDGLRDSVLAFSENVPGTSSKDV--MDMVLVTQYFDT 231
L G AR+R A + ++ SE + +S D+ ++ + +Y +
Sbjct: 208 ILKAEGERQSAFLQAEARERSAEAEARATKMV--SEAI---ASGDIQAVNYFVAQKYTEA 262
Query: 232 MKEIGASSKTNSVFIP 247
+++IG+SS + V +P
Sbjct: 263 LQQIGSSSNSKVVMMP 278
>sp|P0AA53|QMCA_ECOLI Protein QmcA OS=Escherichia coli (strain K12) GN=qmcA PE=1 SV=1
Length = 305
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 119/256 (46%), Gaps = 36/256 (14%)
Query: 19 ETFGKFDDVLEPGCH-CLPWCLGSQVAGQLSLRVQQLDVRC-ETKTKDNVFVNVVASVQY 76
E FG++ L+PG +P+ ++ ++++ Q LD+ E +KDN V + A
Sbjct: 32 ERFGRYTKTLQPGLSLVVPFM--DRIGRKINMMEQVLDIPSQEVISKDNANVTIDAVCFI 89
Query: 77 RALAEKASDAFYKLSNTRSQIQAYVFDVIRASVPKLDLDATFEQKNDIAKAVEEELEKAM 136
+ + A A Y++SN I IR + ++LD Q++ I + +++A
Sbjct: 90 QVI--DAPRAAYEVSNLELAIINLTMTNIRTVLGSMELDEMLSQRDSINSRLLRIVDEAT 147
Query: 137 SHYGYEIVQTLIVDIEPDEHVKRAMNE------------INAEKILQ--IKRAEGEAESK 182
+ +G ++ + I D+ P + +MN + AE I Q I +AEGE +S+
Sbjct: 148 NPWGIKVTRIEIRDVRPPAELISSMNAQMKAERTKRAYILEAEGIRQAEILKAEGEKQSQ 207
Query: 183 YLAGLG---------IARQRQAIVDGLRDSVLAFSENVPGTSSKDV--MDMVLVTQYFDT 231
L G AR+R A + ++ SE + +S D+ ++ + +Y +
Sbjct: 208 ILKAEGERQSAFLQAEARERSAEAEARATKMV--SEAI---ASGDIQAVNYFVAQKYTEA 262
Query: 232 MKEIGASSKTNSVFIP 247
+++IG+SS + V +P
Sbjct: 263 LQQIGSSSNSKVVMMP 278
>sp|P0AA54|QMCA_ECOL6 Protein QmcA OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928
/ UPEC) GN=qmcA PE=3 SV=1
Length = 305
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 119/256 (46%), Gaps = 36/256 (14%)
Query: 19 ETFGKFDDVLEPGCH-CLPWCLGSQVAGQLSLRVQQLDVRC-ETKTKDNVFVNVVASVQY 76
E FG++ L+PG +P+ ++ ++++ Q LD+ E +KDN V + A
Sbjct: 32 ERFGRYTKTLQPGLSLVVPFM--DRIGRKINMMEQVLDIPSQEVISKDNANVTIDAVCFI 89
Query: 77 RALAEKASDAFYKLSNTRSQIQAYVFDVIRASVPKLDLDATFEQKNDIAKAVEEELEKAM 136
+ + A A Y++SN I IR + ++LD Q++ I + +++A
Sbjct: 90 QVI--DAPRAAYEVSNLELAIINLTMTNIRTVLGSMELDEMLSQRDSINSRLLRIVDEAT 147
Query: 137 SHYGYEIVQTLIVDIEPDEHVKRAMNE------------INAEKILQ--IKRAEGEAESK 182
+ +G ++ + I D+ P + +MN + AE I Q I +AEGE +S+
Sbjct: 148 NPWGIKVTRIEIRDVRPPAELISSMNAQMKAERTKRAYILEAEGIRQAEILKAEGEKQSQ 207
Query: 183 YLAGLG---------IARQRQAIVDGLRDSVLAFSENVPGTSSKDV--MDMVLVTQYFDT 231
L G AR+R A + ++ SE + +S D+ ++ + +Y +
Sbjct: 208 ILKAEGERQSAFLQAEARERSAEAEARATKMV--SEAI---ASGDIQAVNYFVAQKYTEA 262
Query: 232 MKEIGASSKTNSVFIP 247
+++IG+SS + V +P
Sbjct: 263 LQQIGSSSNSKVVMMP 278
>sp|P0AA55|QMCA_ECO57 Protein QmcA OS=Escherichia coli O157:H7 GN=qmcA PE=3 SV=1
Length = 305
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 119/256 (46%), Gaps = 36/256 (14%)
Query: 19 ETFGKFDDVLEPGCH-CLPWCLGSQVAGQLSLRVQQLDVRC-ETKTKDNVFVNVVASVQY 76
E FG++ L+PG +P+ ++ ++++ Q LD+ E +KDN V + A
Sbjct: 32 ERFGRYTKTLQPGLSLVVPFM--DRIGRKINMMEQVLDIPSQEVISKDNANVTIDAVCFI 89
Query: 77 RALAEKASDAFYKLSNTRSQIQAYVFDVIRASVPKLDLDATFEQKNDIAKAVEEELEKAM 136
+ + A A Y++SN I IR + ++LD Q++ I + +++A
Sbjct: 90 QVI--DAPRAAYEVSNLELAIINLTMTNIRTVLGSMELDEMLSQRDSINSRLLRIVDEAT 147
Query: 137 SHYGYEIVQTLIVDIEPDEHVKRAMNE------------INAEKILQ--IKRAEGEAESK 182
+ +G ++ + I D+ P + +MN + AE I Q I +AEGE +S+
Sbjct: 148 NPWGIKVTRIEIRDVRPPAELISSMNAQMKAERTKRAYILEAEGIRQAEILKAEGEKQSQ 207
Query: 183 YLAGLG---------IARQRQAIVDGLRDSVLAFSENVPGTSSKDV--MDMVLVTQYFDT 231
L G AR+R A + ++ SE + +S D+ ++ + +Y +
Sbjct: 208 ILKAEGERQSAFLQAEARERSAEAEARATKMV--SEAI---ASGDIQAVNYFVAQKYTEA 262
Query: 232 MKEIGASSKTNSVFIP 247
+++IG+SS + V +P
Sbjct: 263 LQQIGSSSNSKVVMMP 278
>sp|O26788|Y692_METTH Uncharacterized protein MTH_692 OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=MTH_692 PE=3 SV=1
Length = 318
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 107/253 (42%), Gaps = 30/253 (11%)
Query: 19 ETFGKFDDVLEPGCHCL-PWCLGSQVAGQLSLRVQQLDVRC-ETKTKDNVFVNVVASVQY 76
E GK+ +E G + P+ + ++ +R Q +DV E TKDN V V + Y
Sbjct: 31 ERLGKYQRTVESGLVVIIPFI---EAIKKVDMREQVVDVPPQEVITKDNTVVVVDCVIFY 87
Query: 77 RALAEKASDAFYKLSNTRSQIQAYVFDVIRASVPKLDLDATFEQKNDIAKAVEEELEKAM 136
+ +A Y + + I +R + L+LD T + I + E L++A
Sbjct: 88 EVV--DPFNAVYNVVDFYQAITKLAQTNLRNIIGDLELDQTLTSREMINTQLREVLDEAT 145
Query: 137 SHYGYEIVQTLIVDIEPDEHVKRAMN-EINAEKIL-------------QIKRAEGEAESK 182
+G +V+ I IEP + AM+ ++ AE++ +IKRAEG+ ++
Sbjct: 146 DKWGTRVVRVEIQRIEPPGDIVEAMSKQMKAERMKRAAILEAEGYKQSEIKRAEGDKQAA 205
Query: 183 YLAGLGIARQRQAIVDGLRDSVLAFSEN--------VPGTSSKDVMDMVLVTQYFDTMKE 234
L G A + + D + +A +E D + ++ +Y + +++
Sbjct: 206 ILEAEGKAEAIKKVADANKYREIAIAEGQAKAILSVFRAMHEGDPTNDIIALKYLEALEK 265
Query: 235 IGASSKTNSVFIP 247
+ A + + +P
Sbjct: 266 V-ADGRATKILLP 277
>sp|O60121|YH77_SCHPO Uncharacterized protein C16G5.07c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBC16G5.07c PE=3 SV=1
Length = 354
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 91/192 (47%), Gaps = 25/192 (13%)
Query: 10 VDQSTVAIKETFGKFDDVLEPGCHCLPWCLGSQVAGQLSLRVQQLDVRCETK-TKDNVFV 68
V Q + E G+F +L PG L + ++A SL+ + L++ ++ T DNV +
Sbjct: 56 VPQQVAYVVERMGRFSRILTPGVAFLAPII-DKIAYIHSLKERALEIPTQSAITLDNVSL 114
Query: 69 NV--VASVQ----YRAL--AEKASDAFYKLSNTRSQIQAYVFDVIRASVPKLDLDATFEQ 120
+ V +Q Y+A E A A +L+ T +R+ + +L LD +
Sbjct: 115 GLDGVLYIQVYDPYKASYGVEDADYAISQLAQT----------TMRSEIGRLTLDHVLRE 164
Query: 121 KNDIAKAVEEELEKAMSHYGYEIVQTLIVDIEPDEHVKRAMN-EINAEKILQIKRAE-GE 178
+ + + + + KA +G ++ I DI P E V AM+ +++AE+ KRAE E
Sbjct: 165 RQSLNIHITDAINKAAESWGIRCLRHEIRDIRPPESVVMAMHQQVSAER---QKRAEILE 221
Query: 179 AESKYLAGLGIA 190
+E K A + +A
Sbjct: 222 SEGKRQAAINVA 233
>sp|Q58237|Y827_METJA Uncharacterized protein MJ0827 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0827 PE=3 SV=1
Length = 199
Score = 45.1 bits (105), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 76/166 (45%), Gaps = 16/166 (9%)
Query: 21 FGKFDDVLEPGCHCLPWCLGSQVAGQLSLRVQQLDVRCETKTKDNVFVNVVASVQYRAL- 79
G+ L+PG + + L V + RV + + E TKDN V V A V YR +
Sbjct: 39 LGRVIGKLKPGINIIIPFLDVPVKVDMRTRVTDIPPQ-EMITKDNAVVKVDAVVYYRVID 97
Query: 80 AEKA----SDAFYKLSNTRSQIQAYVFDVIRASVPKLDLDATFEQKNDIAKAVEEELEKA 135
EKA D Y + N +RA + ++LD ++ I + E L++
Sbjct: 98 VEKAILEVEDYEYAIINLAQT-------TLRAIIGSMELDEVLNKREYINSKLLEILDRE 150
Query: 136 MSHYGYEIVQTLIVDIEPDEHVKRAM-NEINAEKILQ--IKRAEGE 178
+G I + + +I+P E +K AM ++ AE++ + I AEGE
Sbjct: 151 TDAWGVRIEKVEVKEIDPPEDIKNAMAQQMKAERLKRAAILEAEGE 196
>sp|O28852|Y1420_ARCFU Uncharacterized protein AF_1420 OS=Archaeoglobus fulgidus (strain
ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=AF_1420 PE=3 SV=1
Length = 249
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 97/224 (43%), Gaps = 36/224 (16%)
Query: 30 PGCHCLPWCLGSQVAGQLSLRVQQLDVRC-ETKTKDNVFVNVVASVQYRAL-AEKASDAF 87
PG + L + V + LR DV E TKDNV V V A V YR + KA
Sbjct: 43 PGLFFIIPILENMVV--VDLRTVTYDVPSQEVVTKDNVTVKVNAVVYYRVVDPAKAVTEV 100
Query: 88 YKLSNTRSQIQAYVFDVIRASVPKLDLDATFEQKNDIAKAVEEELEKAMSHYGYEIVQTL 147
+ +Q+ +R+ + + +LD +++ + +++ +++ + +G ++
Sbjct: 101 FDYQYATAQLAQ---TTLRSIIGQAELDEVLSERDKLNVKLQQIIDEETNPWGIKVTAVE 157
Query: 148 IVDIEPDEHVKRAM---NEINAEKILQIKRAEGEAESKYLAGLGIARQRQAIVDGLRDSV 204
I D+E E ++R M E E+ +I RAEGE Y A + + R+A V
Sbjct: 158 IKDVELPEEMRRIMAMQAEAERERRSKIIRAEGE----YQAAMKL---REA------ADV 204
Query: 205 LAFSENVPGTSSKDVMDMVLVTQYFDTMKEIGASSKTNSVF-IP 247
LA SE ++ +Y T+ EI A T V IP
Sbjct: 205 LAQSEG------------AILLRYLQTLNEISAEQNTTIVMPIP 236
>sp|Q9UJZ1|STML2_HUMAN Stomatin-like protein 2 OS=Homo sapiens GN=STOML2 PE=1 SV=1
Length = 356
Score = 39.3 bits (90), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 79/176 (44%), Gaps = 7/176 (3%)
Query: 10 VDQSTVAIKETFGKFDDVLEPGCHCLPWCLGSQVAGQLSLRVQQLDVRCETK-TKDNVFV 68
V Q + E G+F +LEPG + L L ++ SL+ ++V ++ T DNV +
Sbjct: 41 VPQQEAWVVERMGRFHRILEPGLNILIPVL-DRIRYVQSLKEIVINVPEQSAVTLDNVTL 99
Query: 69 NVVASVQYRALAEKASDAFYKLSNTRSQIQAYVFDVIRASVPKLDLDATFEQKNDIAKAV 128
+ + R + A Y + + + +R+ + KL LD F ++ + ++
Sbjct: 100 QIDGVLYLRIM--DPYKASYGVEDPEYAVTQLAQTTMRSELGKLSLDKVFRERESLNASI 157
Query: 129 EEELEKAMSHYGYEIVQTLIVDIEPDEHVKRAMN-EINAE--KILQIKRAEGEAES 181
+ + +A +G ++ I DI VK +M ++ AE K + +EG ES
Sbjct: 158 VDAINQAADCWGIRCLRYEIKDIHVPPRVKESMQMQVEAERRKRATVLESEGTRES 213
>sp|Q32LL2|STML2_BOVIN Stomatin-like protein 2 OS=Bos taurus GN=STOML2 PE=2 SV=1
Length = 356
Score = 38.5 bits (88), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 79/176 (44%), Gaps = 7/176 (3%)
Query: 10 VDQSTVAIKETFGKFDDVLEPGCHCLPWCLGSQVAGQLSLRVQQLDVRCETK-TKDNVFV 68
V Q + E G+F +LEPG + L L ++ SL+ ++V ++ T DNV +
Sbjct: 41 VPQQEAWVVERMGRFHRILEPGLNILIPVL-DRIRYVQSLKEIVINVPEQSAVTLDNVTL 99
Query: 69 NVVASVQYRALAEKASDAFYKLSNTRSQIQAYVFDVIRASVPKLDLDATFEQKNDIAKAV 128
+ + R + A Y + + + +R+ + KL LD F ++ + ++
Sbjct: 100 QIDGVLYLRIM--DPYKASYGVEDPEYAVTQLAQTTMRSELGKLSLDKVFRERESLNASI 157
Query: 129 EEELEKAMSHYGYEIVQTLIVDIEPDEHVKRAMN-EINAE--KILQIKRAEGEAES 181
+ + +A +G ++ I DI VK +M ++ AE K + +EG ES
Sbjct: 158 VDAINQAADCWGIRCLRYEIKDIHVPPRVKESMKMQVEAERRKRATVLESEGTRES 213
>sp|Q4FZT0|STML2_RAT Stomatin-like protein 2 OS=Rattus norvegicus GN=Stoml2 PE=1 SV=1
Length = 353
Score = 38.1 bits (87), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 78/176 (44%), Gaps = 7/176 (3%)
Query: 10 VDQSTVAIKETFGKFDDVLEPGCHCLPWCLGSQVAGQLSLRVQQLDVRCETK-TKDNVFV 68
V Q + E G+F +LEPG + L L ++ SL+ ++V ++ T DNV +
Sbjct: 41 VPQQEAWVVERMGRFHRILEPGLNVLIPVL-DRIRYVQSLKEIVINVPEQSAVTLDNVTL 99
Query: 69 NVVASVQYRALAEKASDAFYKLSNTRSQIQAYVFDVIRASVPKLDLDATFEQKNDIAKAV 128
+ + R + A Y + + + +R+ + KL LD F ++ + +
Sbjct: 100 QIDGVLYLRIM--DPYKASYGVEDPEYAVTQLAQTTMRSELGKLSLDKVFRERESLNANI 157
Query: 129 EEELEKAMSHYGYEIVQTLIVDIEPDEHVKRAMN-EINAE--KILQIKRAEGEAES 181
+ + +A +G ++ I DI VK +M ++ AE K + +EG ES
Sbjct: 158 VDAINQAADCWGIRCLRYEIKDIHVPPRVKESMQMQVEAERRKRATVLESEGTRES 213
>sp|Q99JB2|STML2_MOUSE Stomatin-like protein 2 OS=Mus musculus GN=Stoml2 PE=1 SV=1
Length = 353
Score = 38.1 bits (87), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 78/176 (44%), Gaps = 7/176 (3%)
Query: 10 VDQSTVAIKETFGKFDDVLEPGCHCLPWCLGSQVAGQLSLRVQQLDVRCETK-TKDNVFV 68
V Q + E G+F +LEPG + L L ++ SL+ ++V ++ T DNV +
Sbjct: 41 VPQQEAWVVERMGRFHRILEPGLNVLIPVL-DRIRYVQSLKEIVINVPEQSAVTLDNVTL 99
Query: 69 NVVASVQYRALAEKASDAFYKLSNTRSQIQAYVFDVIRASVPKLDLDATFEQKNDIAKAV 128
+ + R + A Y + + + +R+ + KL LD F ++ + +
Sbjct: 100 QIDGVLYLRIM--DPYKASYGVEDPEYAVTQLAQTTMRSELGKLSLDKVFRERESLNANI 157
Query: 129 EEELEKAMSHYGYEIVQTLIVDIEPDEHVKRAMN-EINAE--KILQIKRAEGEAES 181
+ + +A +G ++ I DI VK +M ++ AE K + +EG ES
Sbjct: 158 VDAINQAADCWGIRCLRYEIKDIHVPPRVKESMQMQVEAERRKRATVLESEGTRES 213
>sp|Q9V0Y1|Y658_PYRAB Uncharacterized protein PYRAB06580 OS=Pyrococcus abyssi (strain GE5
/ Orsay) GN=PYRAB06580 PE=3 SV=1
Length = 268
Score = 36.2 bits (82), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 5/115 (4%)
Query: 49 LRVQQLDVRC-ETKTKDNVFVNVVASVQYRAL-AEKASDAFYKLSNTRSQIQAYVFDVIR 106
LR Q LDV ET TKDNV V V A V +R + KA SQI +R
Sbjct: 65 LRTQVLDVPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQ---TTLR 121
Query: 107 ASVPKLDLDATFEQKNDIAKAVEEELEKAMSHYGYEIVQTLIVDIEPDEHVKRAM 161
+ + + LD +++ + ++ +++A +G ++ I D+E ++RAM
Sbjct: 122 SVIGQAHLDELLSERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQRAM 176
>sp|P0ABC7|HFLK_ECOLI Modulator of FtsH protease HflK OS=Escherichia coli (strain K12)
GN=hflK PE=1 SV=1
Length = 419
Score = 34.7 bits (78), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 64/161 (39%), Gaps = 6/161 (3%)
Query: 6 GCIQVDQSTVAIKETFGKFDDVLEPGCHCLPWCLGSQVAGQLSLRVQQLDVRCETKTKDN 65
G + ++ + FGKF ++EPG + P + +V V++L T D
Sbjct: 96 GFYTIKEAERGVVTRFGKFSHLVEPGLNWKPTFI-DEVKPVNVEAVRELAASGVMLTSDE 154
Query: 66 VFVNVVASVQYRALAEKASDAFYKLSNTRSQIQAYVFDVIRASVPKLDLDATF-EQKNDI 124
V V +VQYR Y +++ ++ +R + K +D E + I
Sbjct: 155 NVVRVEMNVQYRVT--NPEKYLYSVTSPDDSLRQATDSALRGVIGKYTMDRILTEGRTVI 212
Query: 125 AKAVEEELEKAMSHY--GYEIVQTLIVDIEPDEHVKRAMNE 163
+ ELE+ + Y G ++ P E VK A ++
Sbjct: 213 RSDTQRELEETIRPYDMGITLLDVNFQAARPPEEVKAAFDD 253
>sp|P0ABC8|HFLK_ECO57 Protein HflK OS=Escherichia coli O157:H7 GN=hflK PE=3 SV=1
Length = 419
Score = 34.7 bits (78), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 64/161 (39%), Gaps = 6/161 (3%)
Query: 6 GCIQVDQSTVAIKETFGKFDDVLEPGCHCLPWCLGSQVAGQLSLRVQQLDVRCETKTKDN 65
G + ++ + FGKF ++EPG + P + +V V++L T D
Sbjct: 96 GFYTIKEAERGVVTRFGKFSHLVEPGLNWKPTFI-DEVKPVNVEAVRELAASGVMLTSDE 154
Query: 66 VFVNVVASVQYRALAEKASDAFYKLSNTRSQIQAYVFDVIRASVPKLDLDATF-EQKNDI 124
V V +VQYR Y +++ ++ +R + K +D E + I
Sbjct: 155 NVVRVEMNVQYRVT--NPEKYLYSVTSPDDSLRQATDSALRGVIGKYTMDRILTEGRTVI 212
Query: 125 AKAVEEELEKAMSHY--GYEIVQTLIVDIEPDEHVKRAMNE 163
+ ELE+ + Y G ++ P E VK A ++
Sbjct: 213 RSDTQRELEETIRPYDMGITLLDVNFQAARPPEEVKAAFDD 253
>sp|O59180|Y1511_PYRHO Uncharacterized protein PH1511 OS=Pyrococcus horikoshii (strain
ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=PH1511 PE=1 SV=1
Length = 266
Score = 34.7 bits (78), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 55/115 (47%), Gaps = 5/115 (4%)
Query: 49 LRVQQLDVRC-ETKTKDNVFVNVVASVQYRAL-AEKASDAFYKLSNTRSQIQAYVFDVIR 106
LR Q LDV ET TKDNV V V A V +R + KA SQI +R
Sbjct: 65 LRTQVLDVPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQ---TTLR 121
Query: 107 ASVPKLDLDATFEQKNDIAKAVEEELEKAMSHYGYEIVQTLIVDIEPDEHVKRAM 161
+ + + LD +++ + ++ +++A +G ++ I D+E +++AM
Sbjct: 122 SVIGQAHLDELLSERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQKAM 176
>sp|Q89A39|HFLK_BUCBP Protein HflK OS=Buchnera aphidicola subsp. Baizongia pistaciae
(strain Bp) GN=hflK PE=3 SV=1
Length = 417
Score = 34.3 bits (77), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 58/131 (44%), Gaps = 9/131 (6%)
Query: 6 GCIQVDQSTVAIKETFGKFDDVLEPGCHCLPWCLGSQVAGQLSLRVQQLDVRCETKTKDN 65
G + +S + FGKF + PG H P + + +S V++++ T
Sbjct: 87 GFYFIQESEYGVVTCFGKFSYLANPGLHWKPILIQKVIPIDVS-TVREINTSGTILTYSE 145
Query: 66 VFVNVVASVQYRALAEKASDAFYKLSNTRSQIQAYVFDVIRASVPKLDLDATFEQ----- 120
FV V +VQYR + K + ++N + ++ + +R+ + + ++D +
Sbjct: 146 HFVQVNMTVQYRIVDPKK--YLFSVTNPDNCLRQSINSALRSVISRSNIDIFLKNEFSLL 203
Query: 121 -KNDIAKAVEE 130
KNDI +++
Sbjct: 204 AKNDIKVNIQK 214
>sp|P24156|L2CC_DROME Protein l(2)37Cc OS=Drosophila melanogaster GN=l(2)37Cc PE=2 SV=2
Length = 276
Score = 33.9 bits (76), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/120 (21%), Positives = 53/120 (44%), Gaps = 6/120 (5%)
Query: 25 DDVLEPGCHC-LPWCLGSQVAGQLSLRVQQLDVRCETKTKDNVFVNVVASVQYRALAEKA 83
++V+ G H +PW Q +R Q +V T +KD VN+ + YR + ++
Sbjct: 47 ENVVGEGTHFFIPWV---QRPIIFDIRSQPRNVPVITGSKDLQNVNITLRILYRPIPDQL 103
Query: 84 SDAFYKLSNTRSQ--IQAYVFDVIRASVPKLDLDATFEQKNDIAKAVEEELEKAMSHYGY 141
+ L + + + +V++A V + D Q+ +++ V +EL +G+
Sbjct: 104 PKIYTILGQDYDERVLPSIAPEVLKAVVAQFDAGELITQREMVSQRVSQELTVRAKQFGF 163
>sp|Q54GI9|PHB1_DICDI Prohibitin-1, mitochondrial OS=Dictyostelium discoideum GN=phbA
PE=3 SV=1
Length = 271
Score = 33.5 bits (75), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 69/176 (39%), Gaps = 23/176 (13%)
Query: 31 GCH-CLPWCLGSQVAGQLSLRVQQLDVRCETKTKDNVFVNVVASVQYRALAEKASDAFYK 89
G H +PW Q +R +++ +T +KD V+V V +R E F K
Sbjct: 52 GTHFIMPWL---QKPIIFDIRSSPRNIKSDTGSKDLQTVSVTVRVLFRPDVEHLPSIFSK 108
Query: 90 LSNTRSQ--IQAYVFDVIRASVPKLDLDATFEQKNDIAKAVEEELEKAMSHYGYEIVQTL 147
L + + + +V+++ V + D Q+ ++K + E L K + +
Sbjct: 109 LGLDYDERILPSLGNEVLKSVVAQYDATELITQREVVSKEIRESLMKRAKEFNLLLDDVS 168
Query: 148 IVDIEPD-------EHVKRAMNEINAEKILQIK----------RAEGEAESKYLAG 186
I + EH + A E K + +K RAEGEAE+ L G
Sbjct: 169 ITHLSFSQDFTNAIEHKQVAQQEAERSKYIVMKNEQEKKANIIRAEGEAEAAKLIG 224
>sp|Q74M52|EF2_NANEQ Elongation factor 2 OS=Nanoarchaeum equitans (strain Kin4-M)
GN=fusA PE=3 SV=1
Length = 743
Score = 33.1 bits (74), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 62/130 (47%), Gaps = 8/130 (6%)
Query: 57 RCETKTKDNVFVNVVASVQYRA-LAEKASDAFYK-LSNTRSQIQAYVFDVIRASVPKLDL 114
RC+ ++N+F ++ + + + + DAF + + + + + +++ + +L
Sbjct: 552 RCKVIYRENMFFDMTRGIIHIGEVIDMVMDAFMQVMDHGPIAWEPCIGLIVKLTDAQLHE 611
Query: 115 DATFEQKNDIAKAVEEELEKAMSHYG---YEIVQTLIVDIEPDEHVKRAMNEINAEK--I 169
DA + AV E ++ AM G YE VQ ++VD+ PD ++ IN+ + I
Sbjct: 612 DAIHRGPGQVIPAVREAIKLAMKDAGLVLYEPVQVILVDVPPD-YIGDVTALINSRRGAI 670
Query: 170 LQIKRAEGEA 179
L I+ E A
Sbjct: 671 LDIQTEEDRA 680
>sp|Q9LY99|PHB5_ARATH Prohibitin-5, mitochondrial OS=Arabidopsis thaliana GN=PHB5 PE=1
SV=1
Length = 249
Score = 33.1 bits (74), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 82/219 (37%), Gaps = 55/219 (25%)
Query: 21 FGKFDDVLEP----GCH-CLPWCLGSQVAGQLSLRVQQLDVRCETKTKDNVFVNVVASVQ 75
F +F+ +LE G H +PW + +R + + ++ TKD VN+ V
Sbjct: 36 FHRFEGILEEPVGEGTHRKIPWVQKPYI---FDIRTKPYKINTDSGTKDLQMVNLTLRVM 92
Query: 76 YRALAEKASDAFYKLSNTRSQIQAYVFDVIRASVPKLDLDATFEQKNDIAKAVEEELEKA 135
+R DV++A V + + D ++ ++ + E L K
Sbjct: 93 FRP------------------------DVVKAVVAQFNADELLTERPQVSALIRETLIKR 128
Query: 136 MSH--------------YGYEI---VQTLIVDIEPDEHVKRAMNEINAEKILQIKRAEGE 178
YG E V+ V + E K + + + E+ + RAEGE
Sbjct: 129 AKEFNIVLDDVSITGLSYGKEFSLAVERKQVAQQEAERSKFVVAKADQERRAAVIRAEGE 188
Query: 179 AE-----SKYLAGLGIARQRQAIVDGLRDSVLAFSENVP 212
+E SK AG G+ + V+ R+ + S N P
Sbjct: 189 SEAARVISKATAGAGMGLIKLRRVEAAREVAITLS-NSP 226
>sp|A6LG59|MNMG_PARD8 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG
OS=Parabacteroides distasonis (strain ATCC 8503 / DSM
20701 / NCTC 11152) GN=mnmG PE=3 SV=1
Length = 625
Score = 32.3 bits (72), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 64/128 (50%), Gaps = 15/128 (11%)
Query: 101 VFDVIRASVPKLDLDATFEQKNDIAKAVEEELEKAMSHYGYEIVQTLIVDIEPDEHVKRA 160
+FDV+ L T E D+ A+ EL+K + EI++ + I+ ++KR
Sbjct: 506 LFDVV------LRPQTTLENLADLVPALRAELDKVPASRKEEIIEAAEILIKYSGYIKR- 558
Query: 161 MNEINAEKILQIK--RAEGEAESKYLAGLGI-ARQRQAIVDGLRDSVLAFSENVPGTSSK 217
+I A+KI +++ R +G+ + + L ARQ+ +D +A + +PG S
Sbjct: 559 -EQIIADKINRLENIRIKGKFDYNSIQSLSTEARQKLTRID---PDTIAQASRIPGISPS 614
Query: 218 DVMDMVLV 225
D+ +++LV
Sbjct: 615 DI-NILLV 621
>sp|Q9VZA4|BND7A_DROME Band 7 protein CG42540 OS=Drosophila melanogaster GN=CG42540 PE=2
SV=2
Length = 505
Score = 31.6 bits (70), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 56/123 (45%), Gaps = 5/123 (4%)
Query: 30 PGCHCLPWCLGSQVAGQLSLRVQQLDVRC-ETKTKDNVFVNVVASVQYRALAEKASDAFY 88
PG + C+ S ++ LR + DV E TKD+V V+V A V YR A+ +
Sbjct: 223 PGIFFILPCIDSY--ARVDLRTRTYDVPPQEVLTKDSVTVSVDAVVYYR--VSNATVSIA 278
Query: 89 KLSNTRSQIQAYVFDVIRASVPKLDLDATFEQKNDIAKAVEEELEKAMSHYGYEIVQTLI 148
+ N + +R ++ L ++ I+ ++ +L++A +G ++ + I
Sbjct: 279 NVENAHHSTRLLAQTTLRNTMGTRHLHEILSERMTISGTMQVQLDEATDAWGIKVERVEI 338
Query: 149 VDI 151
D+
Sbjct: 339 KDV 341
>sp|P50085|PHB2_YEAST Prohibitin-2 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=PHB2 PE=1 SV=2
Length = 310
Score = 31.6 bits (70), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 86/210 (40%), Gaps = 29/210 (13%)
Query: 27 VLEPGCH-CLPWCLGSQVAGQLSLRVQQLDVRCETKTKDNVFVNVVASVQYRALAEKASD 85
+ G H PW L + + +R + +V T TKD VN+ V R +
Sbjct: 80 IFNEGTHFIFPW-LDTPII--YDVRAKPRNVASLTGTKDLQMVNITCRVLSRPDVVQLPT 136
Query: 86 AFYKLSNTRSQ--IQAYVFDVIRASVPKLDLDATFEQKNDIAKAVEEELEKAMSHYGYEI 143
+ L + + + V +V++A V + + Q+ +++ + E L + S + +
Sbjct: 137 IYRTLGQDYDERVLPSIVNEVLKAVVAQFNASQLITQREKVSRLIRENLVRRASKFNILL 196
Query: 144 --VQTLIVDIEPD------------EHVKRA---MNEINAEKILQIKRAEGEAESKYLAG 186
V + P+ + +RA +++ EK + RA+GEA+S L G
Sbjct: 197 DDVSITYMTFSPEFTNAVEAKQIAQQDAQRAAFVVDKARQEKQGMVVRAQGEAKSAELIG 256
Query: 187 LGIARQRQAI----VDGLRD--SVLAFSEN 210
I + R + +D RD +LA S N
Sbjct: 257 EAIKKSRDYVELKRLDTARDIAKILASSPN 286
>sp|Q9NXE8|CWC25_HUMAN Pre-mRNA-splicing factor CWC25 homolog OS=Homo sapiens GN=CWC25
PE=1 SV=1
Length = 425
Score = 31.2 bits (69), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 6/43 (13%)
Query: 229 FDTM--KEIGASSKTN----SVFIPHGPGAVKDIASQIREGLL 265
F+ M KE G SS+T S+F P G ++ D+AS+IRE L
Sbjct: 97 FEKMEEKEAGCSSETGLLPGSIFAPSGANSLLDMASKIREDPL 139
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.131 0.365
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,037,994
Number of Sequences: 539616
Number of extensions: 3387369
Number of successful extensions: 12403
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 75
Number of HSP's that attempted gapping in prelim test: 12373
Number of HSP's gapped (non-prelim): 92
length of query: 271
length of database: 191,569,459
effective HSP length: 116
effective length of query: 155
effective length of database: 128,974,003
effective search space: 19990970465
effective search space used: 19990970465
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)