BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024197
(271 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZSZ8|FIP37_ARATH FKBP12-interacting protein of 37 kDa OS=Arabidopsis thaliana
GN=FIP37 PE=1 SV=1
Length = 330
Score = 384 bits (987), Expect = e-106, Method: Compositional matrix adjust.
Identities = 190/262 (72%), Positives = 222/262 (84%), Gaps = 7/262 (2%)
Query: 10 DDDFGGDFSANHNSRRSGSKRSFGDIEDDEDDIFGSRKANSKVEETAPGVATGMILSLRE 69
DDDFGGD SA + +R SG++RSFGD+EDDEDDIFGS APGV TGMILSLR
Sbjct: 7 DDDFGGDDSAANATRASGNRRSFGDLEDDEDDIFGSTT-------VAPGVRTGMILSLRG 59
Query: 70 SLQNCKDTLATCQLELEAAKSEIQKWHSSFQNELFIPPGTSPEPRLVINYLQTLKSSEEM 129
SL+NCKD LA+CQ ELE+AK+EIQKW S+FQNE F+P G SPEPR +I+Y+Q LKSSE+
Sbjct: 60 SLKNCKDDLASCQNELESAKTEIQKWKSAFQNESFVPAGKSPEPRFLIDYIQNLKSSEKS 119
Query: 130 LKEQLEKAKKKEAAFIVTFAKREQEIAELKSAVRDLKAQLKPPLMQARRLLLDPAIHEEF 189
LKEQLE AK+KEA+ IV +AKREQE+AELKSAVRDLK+QLKP MQARRLLLDPAIHEEF
Sbjct: 120 LKEQLEIAKRKEASCIVQYAKREQEMAELKSAVRDLKSQLKPASMQARRLLLDPAIHEEF 179
Query: 190 RRLKNLVEEKDKKVKELEENIAAVSFTANSKMGKALMAKCKTLQEENDEIGRQNEEGETH 249
RLKNLVEEKDKK+KEL++NIAAV+FT SK GK LMAKC+TLQEEN+EIG Q EG+ H
Sbjct: 180 SRLKNLVEEKDKKIKELQDNIAAVTFTPQSKNGKMLMAKCRTLQEENEEIGHQAAEGKIH 239
Query: 250 QLSVKLALQKSLNAELKSQFEG 271
+L++KLA+QKS NAEL+SQFEG
Sbjct: 240 ELAIKLAMQKSQNAELRSQFEG 261
>sp|Q4KLT6|FL2D_XENLA Pre-mRNA-splicing regulator WTAP OS=Xenopus laevis GN=wtap PE=2
SV=1
Length = 393
Score = 106 bits (264), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 105/176 (59%), Gaps = 3/176 (1%)
Query: 92 IQKWHSSFQNELFIPPGTSPEPRLVINYLQTLKSSEEMLKEQLEKAKKKEAAFIVTFAKR 151
+Q+W Q E ++ + L N + L+ SEE LK+Q +++ ++E ++ A +
Sbjct: 27 LQRWK---QYEAYVQALENKYTDLNSNDVTGLRESEEKLKQQQQESARRENILVMRLATK 83
Query: 152 EQEIAELKSAVRDLKAQLKPPLMQARRLLLDPAIHEEFRRLKNLVEEKDKKVKELEENIA 211
EQE+ E + ++ LK +P + Q R ++DPAI+ F ++K +E+ K+++ + ++
Sbjct: 84 EQEMQECTNQIQHLKQVQQPSVAQLRATMVDPAINLFFIKMKAELEQTKDKLEQAQNELS 143
Query: 212 AVSFTANSKMGKALMAKCKTLQEENDEIGRQNEEGETHQLSVKLALQKSLNAELKS 267
A FT +S+ GK LMAKC+ L +EN E+GRQ +G QL +LALQK + ELKS
Sbjct: 144 AWKFTPDSQTGKKLMAKCRMLIQENQELGRQLSQGRIAQLEAELALQKKYSEELKS 199
>sp|Q15007|FL2D_HUMAN Pre-mRNA-splicing regulator WTAP OS=Homo sapiens GN=WTAP PE=1 SV=2
Length = 396
Score = 105 bits (263), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 103/176 (58%), Gaps = 3/176 (1%)
Query: 92 IQKWHSSFQNELFIPPGTSPEPRLVINYLQTLKSSEEMLKEQLEKAKKKEAAFIVTFAKR 151
I +W Q E ++ L N + L+ SEE LK+Q +++ ++E ++ A +
Sbjct: 27 ILRWK---QYEAYVQALEGKYTDLNSNDVTGLRESEEKLKQQQQESARRENILVMRLATK 83
Query: 152 EQEIAELKSAVRDLKAQLKPPLMQARRLLLDPAIHEEFRRLKNLVEEKDKKVKELEENIA 211
EQE+ E + ++ LK +P + Q R ++DPAI+ F ++K +E+ K+++ + ++
Sbjct: 84 EQEMQECTTQIQYLKQVQQPSVAQLRSTMVDPAINLFFLKMKGELEQTKDKLEQAQNELS 143
Query: 212 AVSFTANSKMGKALMAKCKTLQEENDEIGRQNEEGETHQLSVKLALQKSLNAELKS 267
A FT +S+ GK LMAKC+ L +EN E+GRQ +G QL +LALQK + ELKS
Sbjct: 144 AWKFTPDSQTGKKLMAKCRMLIQENQELGRQLSQGRIAQLEAELALQKKYSEELKS 199
>sp|Q9ER69|FL2D_MOUSE Pre-mRNA-splicing regulator WTAP OS=Mus musculus GN=Wtap PE=2 SV=3
Length = 396
Score = 105 bits (262), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 95/150 (63%)
Query: 118 NYLQTLKSSEEMLKEQLEKAKKKEAAFIVTFAKREQEIAELKSAVRDLKAQLKPPLMQAR 177
N + L+ SEE LK+Q +++ ++E ++ A +EQE+ E + ++ LK +P + Q R
Sbjct: 50 NDVTGLRESEEKLKQQQQESARRENILVMRLATKEQEMQECTTQIQYLKQVQQPSVAQLR 109
Query: 178 RLLLDPAIHEEFRRLKNLVEEKDKKVKELEENIAAVSFTANSKMGKALMAKCKTLQEEND 237
++DPAI+ F ++K +E+ K+++ + ++A FT +S+ GK LMAKC+ L +EN
Sbjct: 110 STMVDPAINLFFLKMKGELEQTKDKLEQAQNELSAWKFTPDSQTGKKLMAKCRMLIQENQ 169
Query: 238 EIGRQNEEGETHQLSVKLALQKSLNAELKS 267
E+GRQ +G QL +LALQK + ELKS
Sbjct: 170 ELGRQLSQGRIAQLEAELALQKKYSEELKS 199
>sp|Q6P4K5|FL2D_XENTR Pre-mRNA-splicing regulator WTAP OS=Xenopus tropicalis GN=wtap PE=2
SV=1
Length = 393
Score = 105 bits (262), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 104/176 (59%), Gaps = 3/176 (1%)
Query: 92 IQKWHSSFQNELFIPPGTSPEPRLVINYLQTLKSSEEMLKEQLEKAKKKEAAFIVTFAKR 151
+Q+W Q E ++ + L N + L+ SEE LK+Q + + ++E ++ A +
Sbjct: 27 LQRWK---QFEAYVQALENKYTDLNSNDVTGLRESEEKLKQQQQDSARRENILVMRLATK 83
Query: 152 EQEIAELKSAVRDLKAQLKPPLMQARRLLLDPAIHEEFRRLKNLVEEKDKKVKELEENIA 211
EQE+ E + ++ LK +P + Q R ++DPAI+ F ++K +E+ K+++ + ++
Sbjct: 84 EQEMQECTTQIQHLKQVQQPSVAQLRATMVDPAINLFFIKMKAELEQTKDKLEQAQNELS 143
Query: 212 AVSFTANSKMGKALMAKCKTLQEENDEIGRQNEEGETHQLSVKLALQKSLNAELKS 267
A FT +S+ GK LMAKC+ L +EN E+GRQ +G QL +LALQK + ELKS
Sbjct: 144 AWKFTPDSQTGKKLMAKCRMLIQENQELGRQLSQGRIAQLEAELALQKKYSEELKS 199
>sp|Q7SXL7|FL2D_DANRE Pre-mRNA-splicing regulator WTAP OS=Danio rerio GN=wtap PE=2 SV=1
Length = 423
Score = 103 bits (258), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 103/174 (59%), Gaps = 3/174 (1%)
Query: 94 KWHSSFQNELFIPPGTSPEPRLVINYLQTLKSSEEMLKEQLEKAKKKEAAFIVTFAKREQ 153
+W Q+E ++ + L N + LK SEE LK+Q +++ ++E ++ A +EQ
Sbjct: 29 RWK---QHETYVQMLEAKYADLNSNDVTGLKESEEKLKQQQQESARRENILVMRLATKEQ 85
Query: 154 EIAELKSAVRDLKAQLKPPLMQARRLLLDPAIHEEFRRLKNLVEEKDKKVKELEENIAAV 213
E+ E + ++ LK +P Q R ++DPAI+ F ++K +E+ K+++ + ++A
Sbjct: 86 EMQECTTQIQYLKQVQQPSAAQLRSSMVDPAINLFFLKMKAELEQTKDKLEQAQNELSAW 145
Query: 214 SFTANSKMGKALMAKCKTLQEENDEIGRQNEEGETHQLSVKLALQKSLNAELKS 267
FT +S+ GK LMAKC+ L +EN E+GRQ +G QL +LALQK + ELKS
Sbjct: 146 KFTPDSQTGKKLMAKCRMLIQENQELGRQLSQGRIAQLEAELALQKKYSEELKS 199
>sp|Q9Y091|FL2D_DROME Pre-mRNA-splicing regulator female-lethal(2)D OS=Drosophila
melanogaster GN=fl(2)d PE=1 SV=2
Length = 536
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 89/153 (58%)
Query: 114 RLVINYLQTLKSSEEMLKEQLEKAKKKEAAFIVTFAKREQEIAELKSAVRDLKAQLKPPL 173
RL+ + ++ LK + + +Q A+++E + A +EQE + S + + KAQ P
Sbjct: 109 RLLEDEIENLKLEQVRMAQQCADAQRREKILMRRLANKEQEFQDYVSQIAEYKAQQAPTA 168
Query: 174 MQARRLLLDPAIHEEFRRLKNLVEEKDKKVKELEENIAAVSFTANSKMGKALMAKCKTLQ 233
+ R LLDPA++ F RLK ++ K++E + ++A FT +S GK LMAKC+ L
Sbjct: 169 LALRTALLDPAVNLLFERLKKELKATKAKLEETQNELSAWKFTPDSNTGKRLMAKCRLLY 228
Query: 234 EENDEIGRQNEEGETHQLSVKLALQKSLNAELK 266
+EN+E+G+ G +L +LA+QKS + E+K
Sbjct: 229 QENEELGKMTSNGRLAKLETELAMQKSFSEEVK 261
>sp|Q28XY0|FL2D_DROPS Pre-mRNA-splicing regulator female-lethal(2)D OS=Drosophila
pseudoobscura pseudoobscura GN=fl(2)d PE=3 SV=2
Length = 560
Score = 92.0 bits (227), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 89/153 (58%)
Query: 114 RLVINYLQTLKSSEEMLKEQLEKAKKKEAAFIVTFAKREQEIAELKSAVRDLKAQLKPPL 173
RL+ + ++TLK + + + A+++E + A +EQE + S + + KAQ P
Sbjct: 116 RLLEDEIETLKLEQVRMGQICADAQRREKILMRRLANKEQEFQDYVSQIAEYKAQQAPTA 175
Query: 174 MQARRLLLDPAIHEEFRRLKNLVEEKDKKVKELEENIAAVSFTANSKMGKALMAKCKTLQ 233
+ R LLDPA++ F RLK ++ K++E + ++A FT +S GK LMAKC+ L
Sbjct: 176 LALRTALLDPAVNLLFERLKKELKATKTKLEETQNELSAWKFTPDSNTGKRLMAKCRLLY 235
Query: 234 EENDEIGRQNEEGETHQLSVKLALQKSLNAELK 266
+EN+E+G+ G +L +LA+QKS + E+K
Sbjct: 236 QENEELGKMTSNGRLAKLETELAMQKSFSEEVK 268
>sp|Q8WXH0|SYNE2_HUMAN Nesprin-2 OS=Homo sapiens GN=SYNE2 PE=1 SV=3
Length = 6885
Score = 37.4 bits (85), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 70/137 (51%), Gaps = 14/137 (10%)
Query: 123 LKSSEEMLKEQLEKAKKKEAAFIVTFAKREQEIAELKSAVRDLKAQLKPPLMQARRLLLD 182
L+ S + ++ QL + K+ + + T+ + E++I ELKS ++ LKAQ + PL
Sbjct: 5787 LQDSWKDMEPQLAEMIKQFQSTVETWDQCEKKIKELKSRLQVLKAQSEDPL--------- 5837
Query: 183 PAIHEEFRRLKNLVEEKDKKVKELEENIAAVSFTANSKMGKALMAKCKTLQEENDEIGRQ 242
P +HE+ K L++E ++ + +N+ + L+ L+E+ + + RQ
Sbjct: 5838 PELHEDLHNEKELIKELEQSLASWTQNLKELQTMKADLTRHVLVEDVMVLKEQIEHLHRQ 5897
Query: 243 NEEGETHQLSVKLALQK 259
E+ L +++A++K
Sbjct: 5898 WED-----LCLRVAIRK 5909
>sp|Q9SV12|HFA7A_ARATH Heat stress transcription factor A-7a OS=Arabidopsis thaliana
GN=HSFA7A PE=2 SV=1
Length = 272
Score = 33.5 bits (75), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Query: 192 LKNLVEEKDKKVKELEENIAAVSFTANSKMGKALMAKCKTLQEENDEIGRQNE--EGETH 249
L L++++DKK+KELE+N +A K G + M++ + L E G+Q E E H
Sbjct: 192 LHQLLKQRDKKIKELEDNE-----SAKRKRGSSSMSELEVLALEMQGHGKQRNMLEEEDH 246
Query: 250 QLSVKLALQKSLNAELKS 267
QL V+ L EL S
Sbjct: 247 QLVVERELDDGFWEELLS 264
>sp|Q03944|VPS64_YEAST Vacuolar protein sorting-associated protein 64 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=VPS64 PE=1
SV=1
Length = 604
Score = 32.7 bits (73), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 77/188 (40%), Gaps = 31/188 (16%)
Query: 4 RTHLDDDDDFGGDFSANHNSRRSGSKRSFGDIEDDE--DDIFGSRKANSKVEETAPGVAT 61
R+HL ++ G SA R + FGDI + E DDI G E G+
Sbjct: 342 RSHLKENYTEAGVTSATTAQRAAFEAAMFGDINNSELDDDILGPET------EVLSGIFI 395
Query: 62 GMILSLRESLQNCKDTLATCQLELEAAKSEIQKWHS------------SFQNELFIPPG- 108
+L N TL T EL K E++K HS F N+ I
Sbjct: 396 NNSAGTSINLINMIKTLTT---ELSLEKQELEKLHSMQNFMQNYTINLDFINKHMIDMNE 452
Query: 109 -------TSPEPRLVINYLQTLKSSEEMLKEQLEKAKKKEAAFIVTFAKREQEIAELKSA 161
T+ + L N LK SE+ LKE ++ K ++A + + +++ EL+S
Sbjct: 453 KHLLKLSTALQKTLSENNDALLKESEDQLKEIKQQNNKVKSACSLKEKQNHEKLQELESE 512
Query: 162 VRDLKAQL 169
+R+L Q+
Sbjct: 513 LRELNLQI 520
>sp|Q5ZJ27|HOOK1_CHICK Protein Hook homolog 1 OS=Gallus gallus GN=HOOK1 PE=2 SV=1
Length = 718
Score = 31.6 bits (70), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 15/105 (14%)
Query: 118 NYLQTLKSSEEMLKEQLEKAKKKEAAFI---VTFAKREQEIAELKSAVR----DLKA--- 167
N Q L + E L E ++ +KKEAA ++ Q+I EL++A+R D+KA
Sbjct: 539 NLKQKLAAHMEKLSEVHDELQKKEAALAELQPDVSQNPQKIGELEAALRKKDEDMKAMEE 598
Query: 168 QLKPPLMQARRLL--LDPAIH---EEFRRLKNLVEEKDKKVKELE 207
+ K L +AR ++ LDP ++ E L+ + E+DKK++ LE
Sbjct: 599 RYKMYLEKARNVIKTLDPKLNPASAEIMLLRKQITERDKKIEALE 643
>sp|Q9WVQ0|PMFBP_MOUSE Polyamine-modulated factor 1-binding protein 1 OS=Mus musculus
GN=Pmfbp1 PE=2 SV=1
Length = 1022
Score = 31.2 bits (69), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 67/131 (51%), Gaps = 4/131 (3%)
Query: 137 AKKKEAAFIVTFAKREQEIAELKSAVRDLKAQLKPPLMQARRLLLD-PAIHEEFRRLKNL 195
+++K+ + K E+E+ E+K + + + QLK Q + L + A+ +E +R + +
Sbjct: 607 SEQKQRELTNSIRKLEEELLEIKGLLEEKREQLKKSKEQEKALEEEIEALRQEAKRKEKM 666
Query: 196 VEEKDKKVKELEENIAAVSFTANSKMGKAL---MAKCKTLQEENDEIGRQNEEGETHQLS 252
+E +K+ E +EN+ A + +S + +L + K +QE N EI RQ + Q
Sbjct: 667 AKEHLRKLDEEKENLQAELTSRSSHLDSSLNKYNSSQKVIQELNAEIARQKDSIMILQTQ 726
Query: 253 VKLALQKSLNA 263
+ A+QK N
Sbjct: 727 LDSAIQKEKNC 737
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.127 0.341
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,117,565
Number of Sequences: 539616
Number of extensions: 3703576
Number of successful extensions: 19455
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 849
Number of HSP's that attempted gapping in prelim test: 18273
Number of HSP's gapped (non-prelim): 1958
length of query: 271
length of database: 191,569,459
effective HSP length: 116
effective length of query: 155
effective length of database: 128,974,003
effective search space: 19990970465
effective search space used: 19990970465
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 60 (27.7 bits)