BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024201
(271 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1QMV|A Chain A, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|B Chain B, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|C Chain C, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|D Chain D, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|E Chain E, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|F Chain F, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|G Chain G, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|H Chain H, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|I Chain I, Thioredoxin Peroxidase B From Red Blood Cells
pdb|1QMV|J Chain J, Thioredoxin Peroxidase B From Red Blood Cells
Length = 197
Score = 239 bits (611), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 118/190 (62%), Positives = 143/190 (75%), Gaps = 2/190 (1%)
Query: 80 VGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFE 139
+G APDF A AV D F VKLSDY GK YV+LFFYPLDFTFV PTEI AFS+R +F
Sbjct: 7 IGKPAPDFKATAVVDGAFKEVKLSDYKGK-YVVLFFYPLDFTFVXPTEIIAFSNRAEDFR 65
Query: 140 KLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIAL 199
KL E+LGVS DS F+HLAW+ T RK GGLG L PL+AD+T+ +S+ YGVL D+GIA
Sbjct: 66 KLGCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTRRLSEDYGVLKTDEGIAY 125
Query: 200 RGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPAGWKPGDKSMKP 259
RGLFIID +GV++ T+N+L +GRSVDE LR +QA QY E+ EVCPAGWKPG ++KP
Sbjct: 126 RGLFIIDGKGVLRQITVNDLPVGRSVDEALRLVQAFQYTDEH-GEVCPAGWKPGSDTIKP 184
Query: 260 DPKLSKEYFA 269
+ SKEYF+
Sbjct: 185 NVDDSKEYFS 194
>pdb|1QQ2|A Chain A, Crystal Structure Of A Mammalian 2-Cys Peroxiredoxin,
Hbp23.
pdb|1QQ2|B Chain B, Crystal Structure Of A Mammalian 2-Cys Peroxiredoxin,
Hbp23
Length = 199
Score = 232 bits (591), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 110/191 (57%), Positives = 144/191 (75%), Gaps = 3/191 (1%)
Query: 80 VGNTAPDFAAEAVF-DQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEF 138
+G+ AP F A AV D +F ++ LSDY GK YV+ FFYPLDFTFVCPTEI AFSDR EF
Sbjct: 8 IGHPAPSFKATAVMPDGQFKDISLSDYKGK-YVVFFFYPLDFTFVCPTEIIAFSDRAEEF 66
Query: 139 EKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIA 198
+KLN +++G S DS FSHLAW+ T +K GGLG + PL++D ++I++ YGVL D+GI+
Sbjct: 67 KKLNCQVIGASVDSHFSHLAWINTPKKQGGLGPMNIPLVSDPKRTIAQDYGVLKADEGIS 126
Query: 199 LRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPAGWKPGDKSMK 258
RGLFIID +G+++ TIN+L +GRSVDE LR +QA Q+ ++ EVCPAGWKPG ++K
Sbjct: 127 FRGLFIIDDKGILRQITINDLPVGRSVDEILRLVQAFQFTDKH-GEVCPAGWKPGSDTIK 185
Query: 259 PDPKLSKEYFA 269
PD SKEYF+
Sbjct: 186 PDVNKSKEYFS 196
>pdb|2RII|A Chain A, Crystal Structure Of Human Peroxiredoxin I In Complex With
Sulfiredoxin
pdb|2RII|B Chain B, Crystal Structure Of Human Peroxiredoxin I In Complex With
Sulfiredoxin
Length = 199
Score = 230 bits (587), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 109/191 (57%), Positives = 146/191 (76%), Gaps = 3/191 (1%)
Query: 80 VGNTAPDFAAEAVF-DQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEF 138
+G+ AP+F A AV D +F ++ LSDY GK YV+ FFYPLDFTFVCPTEI AFSDR EF
Sbjct: 8 IGHPAPNFKATAVMPDGQFKDISLSDYKGK-YVVFFFYPLDFTFVCPTEIIAFSDRAEEF 66
Query: 139 EKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIA 198
+KLN++++G S DS F HLAWV T +K GGLG + PL++D ++I++ YGVL D+GI+
Sbjct: 67 KKLNSQVIGASVDSHFEHLAWVNTPKKQGGLGPMNIPLVSDPKRTIAQDYGVLKADEGIS 126
Query: 199 LRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPAGWKPGDKSMK 258
RGLFIID +G+++ T+N+L +GRSVDETLR +QA Q+ ++ EV PAGWKPG ++K
Sbjct: 127 FRGLFIIDDKGILRQITVNDLPVGRSVDETLRLVQAFQFTDKH-GEVSPAGWKPGSDTIK 185
Query: 259 PDPKLSKEYFA 269
PD + SKEYF+
Sbjct: 186 PDVQKSKEYFS 196
>pdb|3QPM|A Chain A, Crystal Structure Of Peroxiredoxin Prx4 From Pseudosciaena
Crocea
pdb|3QPM|B Chain B, Crystal Structure Of Peroxiredoxin Prx4 From Pseudosciaena
Crocea
pdb|3QPM|C Chain C, Crystal Structure Of Peroxiredoxin Prx4 From Pseudosciaena
Crocea
pdb|3QPM|D Chain D, Crystal Structure Of Peroxiredoxin Prx4 From Pseudosciaena
Crocea
pdb|3QPM|E Chain E, Crystal Structure Of Peroxiredoxin Prx4 From Pseudosciaena
Crocea
Length = 240
Score = 229 bits (583), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 109/189 (57%), Positives = 138/189 (73%), Gaps = 2/189 (1%)
Query: 80 VGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFE 139
+ AP + AV + EF +KLSDY GK Y++ FFYPLDFTFVCPTEI AFSDR EF
Sbjct: 50 ISKPAPQWEGTAVINGEFKELKLSDYRGK-YLVFFFYPLDFTFVCPTEIIAFSDRVHEFR 108
Query: 140 KLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIAL 199
+NTE++ S DS F+HLAW+ T RK GGLG +K PL++D+T ISK YGV + DQG L
Sbjct: 109 AINTEVVACSVDSQFTHLAWIITPRKQGGLGPMKIPLLSDLTHQISKDYGVYLEDQGHTL 168
Query: 200 RGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPAGWKPGDKSMKP 259
RGLFIID++GV++ T+N+L +GRSVDETLR +QA QY ++ EVCPAGWKPG ++ P
Sbjct: 169 RGLFIIDEKGVLRQITMNDLPVGRSVDETLRLVQAFQYTDKH-GEVCPAGWKPGSDTIIP 227
Query: 260 DPKLSKEYF 268
DP +YF
Sbjct: 228 DPSGKLKYF 236
>pdb|2Z9S|A Chain A, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|B Chain B, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|C Chain C, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|D Chain D, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|E Chain E, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|F Chain F, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|G Chain G, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|H Chain H, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|I Chain I, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
pdb|2Z9S|J Chain J, Crystal Structure Analysis Of Rat Hbp23PEROXIREDOXIN I,
Cys52ser Mutant
Length = 199
Score = 226 bits (576), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 108/191 (56%), Positives = 142/191 (74%), Gaps = 3/191 (1%)
Query: 80 VGNTAPDFAAEAVF-DQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEF 138
+G+ AP F A AV D +F ++ LSDY GK YV+ FFYPLDFTFV PTEI AFSDR EF
Sbjct: 8 IGHPAPSFKATAVMPDGQFKDISLSDYKGK-YVVFFFYPLDFTFVSPTEIIAFSDRAEEF 66
Query: 139 EKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIA 198
+KLN +++G S DS F HLAW+ T +K GGLG + PL++D ++I++ YGVL D+GI+
Sbjct: 67 KKLNCQVIGASVDSHFCHLAWINTPKKQGGLGPMNIPLVSDPKRTIAQDYGVLKADEGIS 126
Query: 199 LRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPAGWKPGDKSMK 258
RGLFIID +G+++ TIN+L +GRSVDE LR +QA Q+ ++ EVCPAGWKPG ++K
Sbjct: 127 FRGLFIIDDKGILRQITINDLPVGRSVDEILRLVQAFQFTDKH-GEVCPAGWKPGSDTIK 185
Query: 259 PDPKLSKEYFA 269
PD SKEYF+
Sbjct: 186 PDVNKSKEYFS 196
>pdb|3TKP|A Chain A, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
The Reduced Form
pdb|3TKP|B Chain B, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
The Reduced Form
pdb|3TKP|C Chain C, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
The Reduced Form
pdb|3TKP|D Chain D, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
The Reduced Form
pdb|3TKP|E Chain E, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
The Reduced Form
pdb|3TKQ|A Chain A, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With Mixed Conformation
pdb|3TKQ|B Chain B, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With Mixed Conformation
pdb|3TKQ|C Chain C, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With Mixed Conformation
pdb|3TKQ|D Chain D, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With Mixed Conformation
pdb|3TKQ|E Chain E, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With Mixed Conformation
pdb|3TKS|E Chain E, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
Three Different Redox States
Length = 246
Score = 223 bits (567), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 104/189 (55%), Positives = 136/189 (71%), Gaps = 2/189 (1%)
Query: 80 VGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFE 139
+ AP + AV D EF +KL+DY GK Y++ FFYPLDFTFVCPTEI AF DR EF
Sbjct: 56 ISKPAPYWEGTAVIDGEFKELKLTDYRGK-YLVFFFYPLDFTFVCPTEIIAFGDRLEEFR 114
Query: 140 KLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIAL 199
+NTE++ S DS F+HLAW+ T R+ GGLG ++ PL++D+T ISK YGV + D G L
Sbjct: 115 SINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISKDYGVYLEDSGHTL 174
Query: 200 RGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPAGWKPGDKSMKP 259
RGLFIID +G+++ T+N+L +GRSVDETLR +QA QY ++ EVCPAGWKPG +++ P
Sbjct: 175 RGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAFQYTDKH-GEVCPAGWKPGSETIIP 233
Query: 260 DPKLSKEYF 268
DP +YF
Sbjct: 234 DPAGKLKYF 242
>pdb|3TJF|A Chain A, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Reduced Form
pdb|3TJF|B Chain B, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Reduced Form
pdb|3TJF|C Chain C, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Reduced Form
pdb|3TJF|D Chain D, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Reduced Form
pdb|3TJF|E Chain E, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Reduced Form
pdb|3TJG|A Chain A, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Oxidized Form
pdb|3TJG|B Chain B, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Oxidized Form
pdb|3TJG|C Chain C, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Oxidized Form
pdb|3TJG|D Chain D, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Oxidized Form
pdb|3TJG|E Chain E, Crystal Structure Of Human Peroxiredoxin Iv C51a Mutant In
Oxidized Form
Length = 254
Score = 222 bits (566), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 104/189 (55%), Positives = 136/189 (71%), Gaps = 2/189 (1%)
Query: 80 VGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFE 139
+ AP + AV D EF +KL+DY GK Y++ FFYPLDFTFVCPTEI AF DR EF
Sbjct: 64 ISKPAPYWEGTAVIDGEFKELKLTDYRGK-YLVFFFYPLDFTFVCPTEIIAFGDRLEEFR 122
Query: 140 KLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIAL 199
+NTE++ S DS F+HLAW+ T R+ GGLG ++ PL++D+T ISK YGV + D G L
Sbjct: 123 SINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISKDYGVYLEDSGHTL 182
Query: 200 RGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPAGWKPGDKSMKP 259
RGLFIID +G+++ T+N+L +GRSVDETLR +QA QY ++ EVCPAGWKPG +++ P
Sbjct: 183 RGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAFQYTDKH-GEVCPAGWKPGSETIIP 241
Query: 260 DPKLSKEYF 268
DP +YF
Sbjct: 242 DPAGKLKYF 250
>pdb|3TJB|A Chain A, Crystal Structure Of Wild-Type Human Peroxiredoxin Iv
pdb|3TJB|B Chain B, Crystal Structure Of Wild-Type Human Peroxiredoxin Iv
pdb|3TJB|C Chain C, Crystal Structure Of Wild-Type Human Peroxiredoxin Iv
pdb|3TJB|D Chain D, Crystal Structure Of Wild-Type Human Peroxiredoxin Iv
pdb|3TJB|E Chain E, Crystal Structure Of Wild-Type Human Peroxiredoxin Iv
Length = 254
Score = 222 bits (566), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 104/189 (55%), Positives = 136/189 (71%), Gaps = 2/189 (1%)
Query: 80 VGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFE 139
+ AP + AV D EF +KL+DY GK Y++ FFYPLDFTFVCPTEI AF DR EF
Sbjct: 64 ISKPAPYWEGTAVIDGEFKELKLTDYRGK-YLVFFFYPLDFTFVCPTEIIAFGDRLEEFR 122
Query: 140 KLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIAL 199
+NTE++ S DS F+HLAW+ T R+ GGLG ++ PL++D+T ISK YGV + D G L
Sbjct: 123 SINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISKDYGVYLEDSGHTL 182
Query: 200 RGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPAGWKPGDKSMKP 259
RGLFIID +G+++ T+N+L +GRSVDETLR +QA QY ++ EVCPAGWKPG +++ P
Sbjct: 183 RGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAFQYTDKH-GEVCPAGWKPGSETIIP 241
Query: 260 DPKLSKEYF 268
DP +YF
Sbjct: 242 DPAGKLKYF 250
>pdb|2PN8|A Chain A, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|B Chain B, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|C Chain C, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|D Chain D, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|E Chain E, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|F Chain F, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|G Chain G, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|H Chain H, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|I Chain I, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
pdb|2PN8|J Chain J, Crystal Structure Of Human Peroxiredoxin 4 (Thioredoxin
Peroxidase)
Length = 211
Score = 222 bits (565), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 104/185 (56%), Positives = 135/185 (72%), Gaps = 2/185 (1%)
Query: 84 APDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNT 143
AP + AV D EF +KL+DY GK Y++ FFYPLDFTFVCPTEI AF DR EF +NT
Sbjct: 25 APYWEGTAVIDGEFKELKLTDYRGK-YLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINT 83
Query: 144 EILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLF 203
E++ S DS F+HLAW+ T R+ GGLG ++ PL++D+T ISK YGV + D G LRGLF
Sbjct: 84 EVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISKDYGVYLEDSGHTLRGLF 143
Query: 204 IIDKEGVIQHSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPAGWKPGDKSMKPDPKL 263
IID +G+++ T+N+L +GRSVDETLR +QA QY ++ EVCPAGWKPG +++ PDP
Sbjct: 144 IIDDKGILRQITLNDLPVGRSVDETLRLVQAFQYTDKH-GEVCPAGWKPGSETIIPDPAG 202
Query: 264 SKEYF 268
+YF
Sbjct: 203 KLKYF 207
>pdb|3TKR|A Chain A, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|I Chain I, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|G Chain G, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|C Chain C, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|F Chain F, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|D Chain D, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|B Chain B, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|H Chain H, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|E Chain E, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
pdb|3TKR|J Chain J, Crystal Structure Of Full-Length Human Peroxiredoxin 4
With T118e Mutation
Length = 246
Score = 222 bits (565), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 104/189 (55%), Positives = 135/189 (71%), Gaps = 2/189 (1%)
Query: 80 VGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFE 139
+ AP + AV D EF +KL+DY GK Y++ FFYPLDFTFVCPTEI AF DR EF
Sbjct: 56 ISKPAPYWEGTAVIDGEFKELKLTDYRGK-YLVFFFYPLDFTFVCPTEIIAFGDRLEEFR 114
Query: 140 KLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIAL 199
+NTE++ S DS F HLAW+ T R+ GGLG ++ PL++D+T ISK YGV + D G L
Sbjct: 115 SINTEVVACSVDSQFEHLAWINTPRRQGGLGPIRIPLLSDLTHQISKDYGVYLEDSGHTL 174
Query: 200 RGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPAGWKPGDKSMKP 259
RGLFIID +G+++ T+N+L +GRSVDETLR +QA QY ++ EVCPAGWKPG +++ P
Sbjct: 175 RGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAFQYTDKH-GEVCPAGWKPGSETIIP 233
Query: 260 DPKLSKEYF 268
DP +YF
Sbjct: 234 DPAGKLKYF 242
>pdb|1ZYE|A Chain A, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|B Chain B, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|C Chain C, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|D Chain D, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|E Chain E, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|F Chain F, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|G Chain G, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|H Chain H, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|I Chain I, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|J Chain J, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|K Chain K, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
pdb|1ZYE|L Chain L, Crystal Strucutre Analysis Of Bovine Mitochondrial
Peroxiredoxin Iii
Length = 220
Score = 221 bits (562), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 105/194 (54%), Positives = 138/194 (71%), Gaps = 2/194 (1%)
Query: 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTE 137
P V AP F AV EF + L D+ GK Y++LFFYPLDFTFVCPTEI AFSD+ +E
Sbjct: 27 PAVTQHAPYFKGTAVVSGEFKEISLDDFKGK-YLVLFFYPLDFTFVCPTEIIAFSDKASE 85
Query: 138 FEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGI 197
F +N E++ VS DS FSHLAW+ T RK+GGLG + L++D+TK IS+ YGVL+ G+
Sbjct: 86 FHDVNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQISRDYGVLLEGPGL 145
Query: 198 ALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPAGWKPGDKSM 257
ALRGLFIID GVI+H ++N+L +GRSV+ETLR ++A Q+V+ + EV PA W P ++
Sbjct: 146 ALRGLFIIDPNGVIKHLSVNDLPVGRSVEETLRLVKAFQFVEAH-GEVSPANWTPESPTI 204
Query: 258 KPDPKLSKEYFAAI 271
KP P S+EYF +
Sbjct: 205 KPHPTASREYFEKV 218
>pdb|3HY2|A Chain A, Crystal Structure Of Sulfiredoxin In Complex With
Peroxiredoxin I And Atp:mg2+
pdb|3HY2|B Chain B, Crystal Structure Of Sulfiredoxin In Complex With
Peroxiredoxin I And Atp:mg2+
Length = 206
Score = 220 bits (561), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 106/191 (55%), Positives = 143/191 (74%), Gaps = 3/191 (1%)
Query: 80 VGNTAPDFAAEAVF-DQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEF 138
+G+ AP+F A AV D +F ++ LSDY GK YV+ FFYPLDFTFV PTEI AFSDR EF
Sbjct: 8 IGHPAPNFKATAVMPDGQFKDISLSDYKGK-YVVFFFYPLDFTFVDPTEIIAFSDRAEEF 66
Query: 139 EKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIA 198
+KLN++++G S DS F HL WV T +K GGLG + PL++D ++I++ YGVL D+GI+
Sbjct: 67 KKLNSQVIGASVDSHFEHLEWVNTPKKQGGLGPMNIPLVSDPKRTIAQDYGVLKADEGIS 126
Query: 199 LRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPAGWKPGDKSMK 258
RGLFIID +G+++ T+N+L +GRSVDETLR +QA Q+ ++ EV PAGWKPG ++
Sbjct: 127 FRGLFIIDDKGILRQITVNDLPVGRSVDETLRLVQAFQFTDKH-GEVSPAGWKPGSDTIC 185
Query: 259 PDPKLSKEYFA 269
PD + SKEYF+
Sbjct: 186 PDVQKSKEYFS 196
>pdb|3TJK|A Chain A, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Reduced Form
pdb|3TJK|B Chain B, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Reduced Form
pdb|3TJK|C Chain C, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Reduced Form
pdb|3TJK|D Chain D, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Reduced Form
pdb|3TJK|E Chain E, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Reduced Form
Length = 254
Score = 218 bits (556), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 103/189 (54%), Positives = 135/189 (71%), Gaps = 2/189 (1%)
Query: 80 VGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFE 139
+ AP + AV D EF +KL+DY GK Y++ FFYPLDFTFVCPTEI AF DR EF
Sbjct: 64 ISKPAPYWEGTAVIDGEFKELKLTDYRGK-YLVFFFYPLDFTFVCPTEIIAFGDRLEEFR 122
Query: 140 KLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIAL 199
+NTE++ S DS F+HLAW+ T R+ GGLG ++ PL++D+T ISK YGV + D G L
Sbjct: 123 SINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISKDYGVYLEDSGHTL 182
Query: 200 RGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPAGWKPGDKSMKP 259
RGLFIID +G+++ T+N+L +GRSVDETLR +QA QY ++ EV PAGWKPG +++ P
Sbjct: 183 RGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAFQYTDKH-GEVAPAGWKPGSETIIP 241
Query: 260 DPKLSKEYF 268
DP +YF
Sbjct: 242 DPAGKLKYF 250
>pdb|3TKS|A Chain A, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
Three Different Redox States
pdb|3TKS|B Chain B, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
Three Different Redox States
pdb|3TKS|C Chain C, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
Three Different Redox States
pdb|3TKS|D Chain D, Crystal Structure Of Full-Length Human Peroxiredoxin 4 In
Three Different Redox States
Length = 246
Score = 218 bits (555), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 103/189 (54%), Positives = 135/189 (71%), Gaps = 2/189 (1%)
Query: 80 VGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFE 139
+ AP + AV D EF +KL+DY GK Y++ FFYPLDFTFV PTEI AF DR EF
Sbjct: 56 ISKPAPYWEGTAVIDGEFKELKLTDYRGK-YLVFFFYPLDFTFVXPTEIIAFGDRLEEFR 114
Query: 140 KLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIAL 199
+NTE++ S DS F+HLAW+ T R+ GGLG ++ PL++D+T ISK YGV + D G L
Sbjct: 115 SINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISKDYGVYLEDSGHTL 174
Query: 200 RGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPAGWKPGDKSMKP 259
RGLFIID +G+++ T+N+L +GRSVDETLR +QA QY ++ EVCPAGWKPG +++ P
Sbjct: 175 RGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAFQYTDKH-GEVCPAGWKPGSETIIP 233
Query: 260 DPKLSKEYF 268
DP +YF
Sbjct: 234 DPAGKLKYF 242
>pdb|1UUL|A Chain A, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|B Chain B, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|C Chain C, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|D Chain D, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|E Chain E, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|F Chain F, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|G Chain G, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|H Chain H, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|I Chain I, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|J Chain J, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
Length = 202
Score = 217 bits (552), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 104/189 (55%), Positives = 135/189 (71%), Gaps = 3/189 (1%)
Query: 84 APDFAAEAVF-DQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLN 142
APDF A+ + F V L+ Y GK +++LFFYP+DFTFVCPTEI FSDR EF +
Sbjct: 12 APDFNETALMPNGTFKKVALTSYKGK-WLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIG 70
Query: 143 TEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGL 202
E+L S DS +SHLAW +RK GGLG + P++AD TK I KSYGVL + G+A RGL
Sbjct: 71 CEVLACSMDSEYSHLAWTSIERKRGGLGQMNIPILADKTKCIMKSYGVLKEEDGVAYRGL 130
Query: 203 FIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPAGWKPGDKSMKPDPK 262
FIID + ++ T+N+L +GR VDE LR ++A Q+V+++ EVCPA WKPGDK+MKPDP+
Sbjct: 131 FIIDPKQNLRQITVNDLPVGRDVDEALRLVKAFQFVEKH-GEVCPANWKPGDKTMKPDPE 189
Query: 263 LSKEYFAAI 271
SKEYF A+
Sbjct: 190 KSKEYFGAV 198
>pdb|3TJJ|A Chain A, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Sulfenylated Form
pdb|3TJJ|B Chain B, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Sulfenylated Form
pdb|3TJJ|C Chain C, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Sulfenylated Form
pdb|3TJJ|D Chain D, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Sulfenylated Form
pdb|3TJJ|E Chain E, Crystal Structure Of Human Peroxiredoxin Iv C245a Mutant
In Sulfenylated Form
Length = 254
Score = 214 bits (544), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 102/189 (53%), Positives = 134/189 (70%), Gaps = 2/189 (1%)
Query: 80 VGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFE 139
+ AP + AV D EF +KL+DY GK Y++ FFYPLDFTFV PTEI AF DR EF
Sbjct: 64 ISKPAPYWEGTAVIDGEFKELKLTDYRGK-YLVFFFYPLDFTFVXPTEIIAFGDRLEEFR 122
Query: 140 KLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIAL 199
+NTE++ S DS F+HLAW+ T R+ GGLG ++ PL++D+T ISK YGV + D G L
Sbjct: 123 SINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISKDYGVYLEDSGHTL 182
Query: 200 RGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPAGWKPGDKSMKP 259
RGLFIID +G+++ T+N+L +GRSVDETLR +QA QY ++ EV PAGWKPG +++ P
Sbjct: 183 RGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAFQYTDKH-GEVAPAGWKPGSETIIP 241
Query: 260 DPKLSKEYF 268
DP +YF
Sbjct: 242 DPAGKLKYF 250
>pdb|2H01|A Chain A, Py00414- Plasmodium Yoelii Thioredoxin Peroxidase I
Length = 192
Score = 207 bits (528), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 101/189 (53%), Positives = 135/189 (71%), Gaps = 3/189 (1%)
Query: 84 APDFAAEAVF-DQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLN 142
AP F AEAVF D F V LSD+IGKKYV+L+FYPLDFTFVCP+EI A F++ N
Sbjct: 6 APSFKAEAVFGDNTFGEVSLSDFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERN 65
Query: 143 TEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGL 202
E+LG S DS F+HLAW +T GG+G++K+ LI+DI+KSI++SY VL ++ +ALR
Sbjct: 66 VELLGCSVDSKFTHLAWKKTPLSQGGIGNIKHTLISDISKSIARSYDVLF-NESVALRAF 124
Query: 203 FIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPAGWKPGDKSMKPDPK 262
+IDK+GV+QH +NNLA+GRSVDE LR + ALQ+ E +VCPA W+ G +SMKP +
Sbjct: 125 VLIDKQGVVQHLLVNNLALGRSVDEILRLIDALQH-HEKYGDVCPANWQKGKESMKPSEE 183
Query: 263 LSKEYFAAI 271
+Y + +
Sbjct: 184 GVAKYLSNL 192
>pdb|3TUE|A Chain A, The Structure Of Tryparedoxin Peroxidase I From Leishmania
Major
pdb|3TUE|B Chain B, The Structure Of Tryparedoxin Peroxidase I From Leishmania
Major
pdb|3TUE|C Chain C, The Structure Of Tryparedoxin Peroxidase I From Leishmania
Major
pdb|3TUE|D Chain D, The Structure Of Tryparedoxin Peroxidase I From Leishmania
Major
pdb|3TUE|E Chain E, The Structure Of Tryparedoxin Peroxidase I From Leishmania
Major
Length = 219
Score = 206 bits (525), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 100/192 (52%), Positives = 135/192 (70%), Gaps = 4/192 (2%)
Query: 80 VGNTAPDFAAEAVF-DQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEF 138
+ + AP F A+ + F + LS Y GK +V+LFFYPLDFTFVCPTE+ AFSD + F
Sbjct: 28 INSPAPSFEEVALMPNGSFKKISLSSYKGK-WVVLFFYPLDFTFVCPTEVIAFSDSVSRF 86
Query: 139 EKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIA 198
+LN E+L S DS ++HL W DRK GGLG + P++AD TK+I++SYGVL QG+A
Sbjct: 87 NELNCEVLACSIDSEYAHLQWTLQDRKKGGLGTMAIPILADKTKNIARSYGVLEESQGVA 146
Query: 199 LRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPAGWKPGDKSMK 258
RGLFIID G+++ T+N++ +GRSV+E LR L+A Q+V+++ EVCPA WK GD MK
Sbjct: 147 YRGLFIIDPHGMLRQITVNDMPVGRSVEEVLRLLEAFQFVEKH-GEVCPANWKKGDPGMK 205
Query: 259 PDPKLSKE-YFA 269
P+P S E YF+
Sbjct: 206 PEPNASVEGYFS 217
>pdb|2H66|A Chain A, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|B Chain B, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|C Chain C, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|D Chain D, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|E Chain E, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|F Chain F, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|G Chain G, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|H Chain H, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|I Chain I, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2H66|J Chain J, The Crystal Structure Of Plasmodium Vivax 2-Cys
Peroxiredoxin
pdb|2I81|A Chain A, Crystal Structure Of Plasmodium Vivax 2-Cys Peroxiredoxin,
Reduced
pdb|2I81|B Chain B, Crystal Structure Of Plasmodium Vivax 2-Cys Peroxiredoxin,
Reduced
pdb|2I81|C Chain C, Crystal Structure Of Plasmodium Vivax 2-Cys Peroxiredoxin,
Reduced
pdb|2I81|D Chain D, Crystal Structure Of Plasmodium Vivax 2-Cys Peroxiredoxin,
Reduced
pdb|2I81|E Chain E, Crystal Structure Of Plasmodium Vivax 2-Cys Peroxiredoxin,
Reduced
Length = 213
Score = 203 bits (517), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 100/196 (51%), Positives = 131/196 (66%), Gaps = 3/196 (1%)
Query: 77 PPLVGNTAPDFAAEAVF-DQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRY 135
P VG AP F AEAVF D F V L+ +IGKKYV+L+FYPLDFTFVCP+EI A
Sbjct: 20 PTYVGKEAPFFKAEAVFGDNSFGEVNLTQFIGKKYVLLYFYPLDFTFVCPSEIIALDKAL 79
Query: 136 TEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQ 195
F + N E+LG S DS ++HLAW +T GG+G++K+ L++DITKSISK Y VL D
Sbjct: 80 DAFHERNVELLGCSVDSKYTHLAWKKTPLAKGGIGNIKHTLLSDITKSISKDYNVLF-DD 138
Query: 196 GIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPAGWKPGDK 255
++LR +ID G++QH +NNLAIGRSVDE LR + A+Q+ E +VCPA W+ G
Sbjct: 139 SVSLRAFVLIDMNGIVQHLLVNNLAIGRSVDEILRIIDAIQH-HEKYGDVCPANWQKGKV 197
Query: 256 SMKPDPKLSKEYFAAI 271
SMKP + +Y + +
Sbjct: 198 SMKPSEEGVAQYLSTL 213
>pdb|3ZTL|A Chain A, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|B Chain B, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|C Chain C, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|D Chain D, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|E Chain E, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|F Chain F, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|G Chain G, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|H Chain H, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|I Chain I, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
pdb|3ZTL|J Chain J, Crystal Structure Of Decameric Form Of Peroxiredoxin I
From Schistosoma Mansoni
Length = 222
Score = 203 bits (517), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 99/179 (55%), Positives = 125/179 (69%), Gaps = 2/179 (1%)
Query: 84 APDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNT 143
AP+F +AV + EF + L DY GK YV+LFFYP DFTFVCPTEI AFSD+ EF N
Sbjct: 46 APEFKGQAVINGEFKEICLKDYRGK-YVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNC 104
Query: 144 EILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLF 203
+++ STDS +SHLAW DRKSGGLG +K PL+AD + ISK+YGV + G A RGLF
Sbjct: 105 QVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEISKAYGVFDEEDGNAFRGLF 164
Query: 204 IIDKEGVIQHSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPAGWKPGDKSMKPDPK 262
IID G+++ TIN+ +GRSVDETLR L A Q+V+++ EVCP WK G +K + K
Sbjct: 165 IIDPNGILRQITINDKPVGRSVDETLRLLDAFQFVEKH-GEVCPVNWKRGQHGIKVNQK 222
>pdb|3ZVJ|A Chain A, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|B Chain B, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|C Chain C, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|E Chain E, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|F Chain F, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|G Chain G, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|H Chain H, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|I Chain I, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|J Chain J, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|K Chain K, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|L Chain L, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|M Chain M, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|N Chain N, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|O Chain O, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|P Chain P, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|Q Chain Q, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|R Chain R, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|S Chain S, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
pdb|3ZVJ|T Chain T, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
Length = 219
Score = 202 bits (515), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 99/179 (55%), Positives = 125/179 (69%), Gaps = 2/179 (1%)
Query: 84 APDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNT 143
AP+F +AV + EF + L DY GK YV+LFFYP DFTFVCPTEI AFSD+ EF N
Sbjct: 43 APEFKGQAVINGEFKEICLKDYRGK-YVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNC 101
Query: 144 EILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLF 203
+++ STDS +SHLAW DRKSGGLG +K PL+AD + ISK+YGV + G A RGLF
Sbjct: 102 QVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEISKAYGVFDEEDGNAFRGLF 161
Query: 204 IIDKEGVIQHSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPAGWKPGDKSMKPDPK 262
IID G+++ TIN+ +GRSVDETLR L A Q+V+++ EVCP WK G +K + K
Sbjct: 162 IIDPNGILRQITINDKPVGRSVDETLRLLDAFQFVEKHG-EVCPVNWKRGQHGIKVNQK 219
>pdb|3ZVJ|D Chain D, Crystal Structure Of High Molecular Weight (Hmw) Form Of
Peroxiredoxin I From Schistosoma Mansoni
Length = 219
Score = 202 bits (513), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 98/179 (54%), Positives = 125/179 (69%), Gaps = 2/179 (1%)
Query: 84 APDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNT 143
AP+F +AV + EF + L DY GK YV+LFFYP DFTFVCPTEI AFSD+ EF N
Sbjct: 43 APEFKGQAVINGEFKEICLKDYRGK-YVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNC 101
Query: 144 EILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLF 203
+++ STDS +SHLAW DRKSGGLG +K PL+AD + ISK+YGV + G A RGLF
Sbjct: 102 QVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEISKAYGVFDEEDGNAFRGLF 161
Query: 204 IIDKEGVIQHSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPAGWKPGDKSMKPDPK 262
IID G+++ T+N+ +GRSVDETLR L A Q+V+++ EVCP WK G +K + K
Sbjct: 162 IIDPNGILRQITLNDKPVGRSVDETLRLLDAFQFVEKHG-EVCPVNWKRGQHGIKVNQK 219
>pdb|2C0D|A Chain A, Structure Of The Mitochondrial 2-Cys Peroxiredoxin From
Plasmodium Falciparum
pdb|2C0D|B Chain B, Structure Of The Mitochondrial 2-Cys Peroxiredoxin From
Plasmodium Falciparum
Length = 221
Score = 192 bits (487), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 92/182 (50%), Positives = 125/182 (68%), Gaps = 3/182 (1%)
Query: 79 LVGNTAPDFAAEAVF-DQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTE 137
LV A +F A+ + + E INV LS +IG+KY L FYPL++TFVCPTEI F+ +
Sbjct: 26 LVTKKAYNFTAQGLNKNNEIINVDLSSFIGQKYCCLLFYPLNYTFVCPTEIIEFNKHIKD 85
Query: 138 FEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGI 197
FE N E+LG+S DSV+SHLAW + GG+G++++ L++DI K ISK+Y VL D
Sbjct: 86 FENKNVELLGISVDSVYSHLAWKNMPIEKGGIGNVEFTLVSDINKDISKNYNVLY-DNSF 144
Query: 198 ALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPAGWKPGDKSM 257
ALRGLFIIDK G ++H T+N+L IGR+V E LRT+ ++ +V + EVCP WK G K+
Sbjct: 145 ALRGLFIIDKNGCVRHQTVNDLPIGRNVQEVLRTIDSIIHV-DTSGEVCPINWKKGQKAF 203
Query: 258 KP 259
KP
Sbjct: 204 KP 205
>pdb|3SBC|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
pdb|3SBC|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
pdb|3SBC|C Chain C, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
pdb|3SBC|D Chain D, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
pdb|3SBC|E Chain E, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
pdb|3SBC|F Chain F, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
pdb|3SBC|G Chain G, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
pdb|3SBC|H Chain H, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
pdb|3SBC|I Chain I, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
pdb|3SBC|J Chain J, Crystal Structure Of Saccharomyces Cerevisiae Tsa1c47s
Mutant Protein
Length = 216
Score = 188 bits (478), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 99/191 (51%), Positives = 125/191 (65%), Gaps = 2/191 (1%)
Query: 80 VGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFE 139
V AP F AV D F V L Y GK YV+L F PL FTFV PTEI AFS+ +FE
Sbjct: 25 VQKQAPTFKKTAVVDGVFDEVSLDKYKGK-YVVLAFIPLAFTFVSPTEIIAFSEAAKKFE 83
Query: 140 KLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIAL 199
+ ++L STDS +S LAW RK GGLG + PL+AD S+S+ YGVLI ++G+AL
Sbjct: 84 EQGAQVLFASTDSEYSLLAWTNIPRKEGGLGPINIPLLADTNHSLSRDYGVLIEEEGVAL 143
Query: 200 RGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPAGWKPGDKSMKP 259
RGLFIID +GVI+H TIN+L +GR+VDE LR ++A Q+ +N V P W PG ++KP
Sbjct: 144 RGLFIIDPKGVIRHITINDLPVGRNVDEALRLVEAFQWTDKN-GTVLPCNWTPGAATIKP 202
Query: 260 DPKLSKEYFAA 270
+ SKEYF A
Sbjct: 203 TVEDSKEYFEA 213
>pdb|1E2Y|A Chain A, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|B Chain B, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|C Chain C, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|D Chain D, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|E Chain E, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|F Chain F, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|G Chain G, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|H Chain H, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|I Chain I, Tryparedoxin Peroxidase From Crithidia Fasciculata
pdb|1E2Y|J Chain J, Tryparedoxin Peroxidase From Crithidia Fasciculata
Length = 188
Score = 183 bits (464), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 92/180 (51%), Positives = 121/180 (67%), Gaps = 3/180 (1%)
Query: 80 VGNTAPDFAAEAVF-DQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEF 138
+ + AP+F A+ + F V LS Y GK YV+LFFYP DFTFVCPTEI FSD F
Sbjct: 8 LNHPAPEFDDXALXPNGTFKKVSLSSYKGK-YVVLFFYPXDFTFVCPTEIIQFSDDAKRF 66
Query: 139 EKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIA 198
++NTE++ S DS +SHL W DRK GGLG P +AD TK+I+++YGVL D G+A
Sbjct: 67 AEINTEVISCSCDSEYSHLQWTSVDRKKGGLGPXAIPXLADKTKAIARAYGVLDEDSGVA 126
Query: 199 LRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPAGWKPGDKSMK 258
RG+FIID G ++ IN+ IGR+V+E +R ++ALQ+V+E+ EVCPA WK GD K
Sbjct: 127 YRGVFIIDPNGKLRQIIINDXPIGRNVEEVIRLVEALQFVEEH-GEVCPANWKKGDAKKK 185
>pdb|1ZOF|A Chain A, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
pdb|1ZOF|B Chain B, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
pdb|1ZOF|C Chain C, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
pdb|1ZOF|D Chain D, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
pdb|1ZOF|E Chain E, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
pdb|1ZOF|F Chain F, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
pdb|1ZOF|G Chain G, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
pdb|1ZOF|H Chain H, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
pdb|1ZOF|I Chain I, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
pdb|1ZOF|J Chain J, Crystal Structure Of Alkyl Hydroperoxide-Reductase (Ahpc)
From Helicobacter Pylori
Length = 198
Score = 180 bits (456), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 92/192 (47%), Positives = 124/192 (64%), Gaps = 4/192 (2%)
Query: 79 LVGNTAPDFAAEAVFDQEFI--NVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYT 136
+V APDF A AV + + +LS +GK VILFF+P DFTFVCPTEI AF R
Sbjct: 2 VVTKLAPDFKAPAVLGNNEVDEHFELSKNLGKNGVILFFWPKDFTFVCPTEIIAFDKRVK 61
Query: 137 EFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQG 196
+F + ++GVS DS H AW T + GG+G + +P++ADITKSIS+ Y VL ++
Sbjct: 62 DFHEKGFNVIGVSIDSEQVHFAWKNTPVEKGGIGQVSFPMVADITKSISRDYDVLF-EEA 120
Query: 197 IALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPAGWKPGDKS 256
IALRG F+IDK ++H+ IN+L +GR+ DE LR + AL + +E+ EVCPAGW+ GDK
Sbjct: 121 IALRGAFLIDKNMKVRHAVINDLPLGRNADEMLRMVDALLHFEEH-GEVCPAGWRKGDKG 179
Query: 257 MKPDPKLSKEYF 268
MK + EY
Sbjct: 180 MKATHQGVAEYL 191
>pdb|1WE0|A Chain A, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|B Chain B, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|C Chain C, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|D Chain D, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|E Chain E, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|F Chain F, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|G Chain G, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|H Chain H, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|I Chain I, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
pdb|1WE0|J Chain J, Crystal Structure Of Peroxiredoxin (Ahpc) From
Amphibacillus Xylanus
Length = 187
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/182 (42%), Positives = 109/182 (59%), Gaps = 5/182 (2%)
Query: 79 LVGNTAPDFAAEAV-FDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTE 137
L+G F A+A ++F V +D GK + I+ FYP DF+FVCPTE+ Y E
Sbjct: 2 LIGTEVQPFRAQAFQSGKDFFEVTEADLKGK-WSIVVFYPADFSFVCPTELEDVQKEYAE 60
Query: 138 FEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGI 197
+KL E+ VSTD+ F H AW S +G ++Y +I D +++IS+ + VL + G+
Sbjct: 61 LKKLGVEVYSVSTDTHFVHKAW---HENSPAVGSIEYIMIGDPSQTISRQFDVLNEETGL 117
Query: 198 ALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPAGWKPGDKSM 257
A RG FIID +GVIQ IN IGR + ++A QYV+ENP EVCPA W+ G +++
Sbjct: 118 ADRGTFIIDPDGVIQAIEINADGIGRDASTLINKVKAAQYVRENPGEVCPAKWEEGGETL 177
Query: 258 KP 259
KP
Sbjct: 178 KP 179
>pdb|1YEP|A Chain A, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Olgomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YEP|B Chain B, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Olgomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YEP|C Chain C, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Olgomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YEP|D Chain D, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Olgomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YEP|E Chain E, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Olgomerization In Ahpc, A
Bacterial Peroxiredoxin
Length = 186
Score = 144 bits (362), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 105/173 (60%), Gaps = 4/173 (2%)
Query: 87 FAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEIL 146
F +A + EFI V D G+ + + FFYP DFTFVCPTE+ +D Y E +KL ++
Sbjct: 10 FKNQAFKNGEFIEVTEKDTEGR-WSVFFFYPADFTFVCPTELGDVADHYEELQKLGVDVY 68
Query: 147 GVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIID 206
VSTD+ F+H AW + S + +KY +I D T ++++++ + D+G+A R F++D
Sbjct: 69 SVSTDTHFTHKAWHSS---SETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRATFVVD 125
Query: 207 KEGVIQHSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPAGWKPGDKSMKP 259
+G+IQ + IGR + LR ++A QYV +P EVCPA WK G+ ++ P
Sbjct: 126 PQGIIQAIEVTAEGIGRDASDLLRKIKAAQYVAAHPGEVCPAKWKEGEATLAP 178
>pdb|1YEX|A Chain A, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YEX|B Chain B, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YEX|C Chain C, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YEX|D Chain D, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YEX|E Chain E, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin
Length = 186
Score = 143 bits (361), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 104/173 (60%), Gaps = 4/173 (2%)
Query: 87 FAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEIL 146
F +A + EFI V D G+ + + FFYP DFTFVCPTE+ +D Y E +KL ++
Sbjct: 10 FKNQAFKNGEFIEVTEKDTEGR-WSVFFFYPADFTFVCPTELGDVADHYEELQKLGVDVY 68
Query: 147 GVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIID 206
VSTD+ F H AW + S + +KY +I D T ++++++ + D+G+A R F++D
Sbjct: 69 SVSTDTHFDHKAWHSS---SETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRATFVVD 125
Query: 207 KEGVIQHSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPAGWKPGDKSMKP 259
+G+IQ + IGR + LR ++A QYV +P EVCPA WK G+ ++ P
Sbjct: 126 PQGIIQAIEVTAEGIGRDASDLLRKIKAAQYVAAHPGEVCPAKWKEGEATLAP 178
>pdb|1YF1|A Chain A, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|B Chain B, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|C Chain C, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|D Chain D, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|E Chain E, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|F Chain F, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|G Chain G, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|H Chain H, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|I Chain I, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF1|J Chain J, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin
Length = 186
Score = 142 bits (359), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 69/181 (38%), Positives = 106/181 (58%), Gaps = 4/181 (2%)
Query: 79 LVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEF 138
L+ F +A + EFI V D G+ + + FFYP DFTFVCPTE+ +D Y E
Sbjct: 2 LINTKIKPFKNQAFKNGEFIEVTEKDTEGR-WSVFFFYPADFTFVCPTELGDVADHYEEL 60
Query: 139 EKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIA 198
+KL ++ VSTD+ F H AW + S + +KY +I D T ++++++ + D+G+A
Sbjct: 61 QKLGVDVYSVSTDTHFVHKAWHSS---SETIAKIKYAMIGDPTGALTRNFDNMREDEGLA 117
Query: 199 LRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPAGWKPGDKSMK 258
R F++D +G+IQ + IGR + LR ++A QYV +P EVCPA WK G+ ++
Sbjct: 118 DRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQYVAAHPGEVCPAKWKEGEATLA 177
Query: 259 P 259
P
Sbjct: 178 P 178
>pdb|1YF0|A Chain A, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF0|B Chain B, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF0|C Chain C, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF0|D Chain D, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin.
pdb|1YF0|E Chain E, Structural And Biochemical Analysis Of The Link Between
Enzymatic Activity And Oligomerization In Ahpc, A
Bacterial Peroxiredoxin
Length = 186
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 69/181 (38%), Positives = 106/181 (58%), Gaps = 4/181 (2%)
Query: 79 LVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEF 138
L+ F +A + EFI V D G+ + + FFYP DFTFVCPTE+ +D Y E
Sbjct: 2 LINTKIKPFKNQAFKNGEFIEVTEKDTEGR-WSVFFFYPADFTFVCPTELGDVADHYEEL 60
Query: 139 EKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIA 198
+KL ++ VSTD+ F H AW + S + +KY +I D T ++++++ + D+G+A
Sbjct: 61 QKLGVDVYSVSTDTHFIHKAWHSS---SETIAKIKYAMIGDPTGALTRNFDNMREDEGLA 117
Query: 199 LRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPAGWKPGDKSMK 258
R F++D +G+IQ + IGR + LR ++A QYV +P EVCPA WK G+ ++
Sbjct: 118 DRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQYVAAHPGEVCPAKWKEGEATLA 177
Query: 259 P 259
P
Sbjct: 178 P 178
>pdb|1N8J|A Chain A, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|B Chain B, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|C Chain C, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|D Chain D, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|E Chain E, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|F Chain F, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|G Chain G, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|H Chain H, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|I Chain I, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|J Chain J, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|K Chain K, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|L Chain L, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|M Chain M, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|N Chain N, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|O Chain O, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|P Chain P, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|Q Chain Q, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|R Chain R, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|S Chain S, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
pdb|1N8J|T Chain T, Crystal Structure Of Ahpc With Active Site Cysteine
Mutated To Serine (C46s)
Length = 186
Score = 140 bits (353), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 104/173 (60%), Gaps = 4/173 (2%)
Query: 87 FAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEIL 146
F +A + EFI V D G+ + + FFYP DFTFV PTE+ +D Y E +KL ++
Sbjct: 10 FKNQAFKNGEFIEVTEKDTEGR-WSVFFFYPADFTFVSPTELGDVADHYEELQKLGVDVY 68
Query: 147 GVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIID 206
VSTD+ F+H AW + S + +KY +I D T ++++++ + D+G+A R F++D
Sbjct: 69 SVSTDTHFTHKAWHSS---SETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRATFVVD 125
Query: 207 KEGVIQHSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPAGWKPGDKSMKP 259
+G+IQ + IGR + LR ++A QYV +P EVCPA WK G+ ++ P
Sbjct: 126 PQGIIQAIEVTAEGIGRDASDLLRKIKAAQYVAAHPGEVCPAKWKEGEATLAP 178
>pdb|3EMP|A Chain A, Crystal Structure Of The S-Acetanilide Modified Form Of
C165s Ahpc
pdb|3EMP|B Chain B, Crystal Structure Of The S-Acetanilide Modified Form Of
C165s Ahpc
pdb|3EMP|C Chain C, Crystal Structure Of The S-Acetanilide Modified Form Of
C165s Ahpc
pdb|3EMP|D Chain D, Crystal Structure Of The S-Acetanilide Modified Form Of
C165s Ahpc
pdb|3EMP|E Chain E, Crystal Structure Of The S-Acetanilide Modified Form Of
C165s Ahpc
Length = 186
Score = 140 bits (353), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 104/173 (60%), Gaps = 4/173 (2%)
Query: 87 FAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEIL 146
F +A + EFI V D G+ + + FFYP DFTFVCPTE+ +D Y E +KL ++
Sbjct: 10 FKNQAFKNGEFIEVTEKDTEGR-WSVFFFYPADFTFVCPTELGDVADHYEELQKLGVDVY 68
Query: 147 GVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIID 206
VSTD+ F+H AW + S + +KY +I D T ++++++ + D+G+A R F++D
Sbjct: 69 SVSTDTHFTHKAWHSS---SETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRATFVVD 125
Query: 207 KEGVIQHSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPAGWKPGDKSMKP 259
+G+IQ + IGR + LR ++A QYV +P EV PA WK G+ ++ P
Sbjct: 126 PQGIIQAIEVTAEGIGRDASDLLRKIKAAQYVAAHPGEVSPAKWKEGEATLAP 178
>pdb|2BMX|A Chain A, Mycobacterium Tuberculosis Ahpc
pdb|2BMX|B Chain B, Mycobacterium Tuberculosis Ahpc
pdb|2BMX|C Chain C, Mycobacterium Tuberculosis Ahpc
Length = 195
Score = 124 bits (312), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 95/162 (58%), Gaps = 9/162 (5%)
Query: 96 EFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFS 155
++ SD K+ ++FF+P DFTFVCPTEI AFS EFE + +ILGVS DS F+
Sbjct: 33 DYFTTITSDEHPGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQILGVSIDSEFA 92
Query: 156 HLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHST 215
H W + L L +P ++DI + +S++ GVL D G+A R FI+D IQ +
Sbjct: 93 HFQWRA---QHNDLKTLPFPXLSDIKRELSQAAGVLNAD-GVADRVTFIVDPNNEIQFVS 148
Query: 216 INNLAIGRSVDETLRTLQALQYVQENPDEVCPAGWKPGDKSM 257
++GR+VDE LR L ALQ DE+C + W+ GD ++
Sbjct: 149 ATAGSVGRNVDEVLRVLDALQ-----SDELCASNWRKGDPTL 185
>pdb|2E2G|A Chain A, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|B Chain B, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|C Chain C, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|D Chain D, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|E Chain E, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|F Chain F, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|G Chain G, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|H Chain H, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|I Chain I, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
pdb|2E2G|J Chain J, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Pre-Oxidation Form)
Length = 250
Score = 108 bits (269), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 104/176 (59%), Gaps = 9/176 (5%)
Query: 78 PLVGNTAPDFAAEAVFDQEFINVKLSD-YIGK-KYVILFFYPLDFTFVCPTEITAFSDRY 135
PL+G P+ E D I KL D Y+ + K+ +LF +P DFT VC TE +F+ RY
Sbjct: 6 PLIGERFPEM--EVTTDHGVI--KLPDHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRY 61
Query: 136 TEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQ 195
+F++L +++G+S DSVFSH+ W + + G+ + +P+IAD ++++ G+L +
Sbjct: 62 EDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGV-RIPFPIIADPQGTVARRLGLLHAES 120
Query: 196 GI-ALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPAGW 250
+RG+FI+D GVI+ + +GR VDE LR ++AL+ + ++ PA W
Sbjct: 121 ATHTVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKALK-LGDSLKRAVPADW 175
>pdb|3A2V|A Chain A, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|B Chain B, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|C Chain C, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|D Chain D, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|E Chain E, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|F Chain F, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|G Chain G, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|H Chain H, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|I Chain I, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
pdb|3A2V|J Chain J, Peroxiredoxin (C207s) From Aeropyrum Pernix K1 Complexed
With Hydrogen Peroxide
Length = 249
Score = 108 bits (269), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 104/176 (59%), Gaps = 9/176 (5%)
Query: 78 PLVGNTAPDFAAEAVFDQEFINVKLSD-YIGK-KYVILFFYPLDFTFVCPTEITAFSDRY 135
PL+G P+ E D I KL D Y+ + K+ +LF +P DFT VC TE +F+ RY
Sbjct: 5 PLIGERFPEM--EVTTDHGVI--KLPDHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRY 60
Query: 136 TEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQ 195
+F++L +++G+S DSVFSH+ W + + G+ + +P+IAD ++++ G+L +
Sbjct: 61 EDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGV-RIPFPIIADPQGTVARRLGLLHAES 119
Query: 196 GI-ALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPAGW 250
+RG+FI+D GVI+ + +GR VDE LR ++AL+ + ++ PA W
Sbjct: 120 ATHTVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKALK-LGDSLKRAVPADW 174
>pdb|3A5W|A Chain A, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|B Chain B, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|C Chain C, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|D Chain D, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|E Chain E, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|F Chain F, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|G Chain G, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|H Chain H, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|I Chain I, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
pdb|3A5W|J Chain J, Peroxiredoxin (Wild Type) From Aeropyrum Pernix K1
(Reduced Form)
Length = 249
Score = 107 bits (268), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 104/176 (59%), Gaps = 9/176 (5%)
Query: 78 PLVGNTAPDFAAEAVFDQEFINVKLSD-YIGK-KYVILFFYPLDFTFVCPTEITAFSDRY 135
PL+G P+ E D I KL D Y+ + K+ +LF +P DFT VC TE +F+ RY
Sbjct: 5 PLIGERFPEM--EVTTDHGVI--KLPDHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRY 60
Query: 136 TEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQ 195
+F++L +++G+S DSVFSH+ W + + G+ + +P+IAD ++++ G+L +
Sbjct: 61 EDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGV-RIPFPIIADPQGTVARRLGLLHAES 119
Query: 196 GI-ALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPAGW 250
+RG+FI+D GVI+ + +GR VDE LR ++AL+ + ++ PA W
Sbjct: 120 ATHTVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKALK-LGDSLKRAVPADW 174
>pdb|1X0R|A Chain A, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|B Chain B, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|C Chain C, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|D Chain D, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|E Chain E, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|F Chain F, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|G Chain G, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|H Chain H, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|I Chain I, Thioredoxin Peroxidase From Aeropyrum Pernix K1
pdb|1X0R|J Chain J, Thioredoxin Peroxidase From Aeropyrum Pernix K1
Length = 249
Score = 106 bits (264), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 103/176 (58%), Gaps = 9/176 (5%)
Query: 78 PLVGNTAPDFAAEAVFDQEFINVKLSD-YIGK-KYVILFFYPLDFTFVCPTEITAFSDRY 135
PL+G P+ E D I KL D Y+ + K+ +LF +P DFT VC TE +F+ RY
Sbjct: 5 PLIGERFPE--XEVTTDHGVI--KLPDHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRY 60
Query: 136 TEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQ 195
+F++L +++G+S DSVFSH+ W + + G+ + +P+IAD ++++ G+L +
Sbjct: 61 EDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGV-RIPFPIIADPQGTVARRLGLLHAES 119
Query: 196 GI-ALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPAGW 250
+RG+FI+D GVI+ +GR VDE LR ++AL+ + ++ PA W
Sbjct: 120 ATHTVRGVFIVDARGVIRTXLYYPXELGRLVDEILRIVKALK-LGDSLKRAVPADW 174
>pdb|3A2W|A Chain A, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|B Chain B, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|C Chain C, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|D Chain D, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|E Chain E, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|F Chain F, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|G Chain G, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|H Chain H, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|I Chain I, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2W|J Chain J, Peroxiredoxin (C50s) From Aeropytum Pernix K1
(Peroxide-Bound Form)
pdb|3A2X|A Chain A, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|B Chain B, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|C Chain C, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|D Chain D, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|E Chain E, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|F Chain F, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|G Chain G, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|H Chain H, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|I Chain I, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
pdb|3A2X|J Chain J, Peroxiredoxin (C50s) From Aeropyrum Pernix K1
(Acetate-Bound Form)
Length = 249
Score = 103 bits (258), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 103/176 (58%), Gaps = 9/176 (5%)
Query: 78 PLVGNTAPDFAAEAVFDQEFINVKLSD-YIGK-KYVILFFYPLDFTFVCPTEITAFSDRY 135
PL+G P+ E D I KL D Y+ + K+ +LF +P DFT V TE +F+ RY
Sbjct: 5 PLIGERFPEM--EVTTDHGVI--KLPDHYVSQGKWFVLFSHPADFTPVSTTEFVSFARRY 60
Query: 136 TEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQ 195
+F++L +++G+S DSVFSH+ W + + G+ + +P+IAD ++++ G+L +
Sbjct: 61 EDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGV-RIPFPIIADPQGTVARRLGLLHAES 119
Query: 196 GI-ALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPAGW 250
+RG+FI+D GVI+ + +GR VDE LR ++AL+ + ++ PA W
Sbjct: 120 ATHTVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKALK-LGDSLKRAVPADW 174
>pdb|2ZCT|A Chain A, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|B Chain B, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|C Chain C, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|D Chain D, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|E Chain E, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|F Chain F, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|G Chain G, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|H Chain H, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|I Chain I, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
pdb|2ZCT|J Chain J, Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent
Sulfur Intermediate
Length = 249
Score = 103 bits (258), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 103/176 (58%), Gaps = 9/176 (5%)
Query: 78 PLVGNTAPDFAAEAVFDQEFINVKLSD-YIGK-KYVILFFYPLDFTFVCPTEITAFSDRY 135
PL+G P+ E D I KL D Y+ + K+ +LF +P DFT V TE +F+ RY
Sbjct: 5 PLIGERFPEM--EVTTDHGVI--KLPDHYVSQGKWFVLFSHPADFTPVXTTEFVSFARRY 60
Query: 136 TEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQ 195
+F++L +++G+S DSVFSH+ W + + G+ + +P+IAD ++++ G+L +
Sbjct: 61 EDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGV-RIPFPIIADPQGTVARRLGLLHAES 119
Query: 196 GI-ALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPAGW 250
+RG+FI+D GVI+ + +GR VDE LR ++AL+ + ++ PA W
Sbjct: 120 ATHTVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKALK-LGDSLKRAVPADW 174
>pdb|2E2M|A Chain A, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|B Chain B, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|C Chain C, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|D Chain D, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|E Chain E, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|F Chain F, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|G Chain G, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|H Chain H, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|I Chain I, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2E2M|J Chain J, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfinic Acid Form)
pdb|2NVL|A Chain A, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|B Chain B, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|C Chain C, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|D Chain D, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|E Chain E, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|F Chain F, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|G Chain G, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|H Chain H, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|I Chain I, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
pdb|2NVL|J Chain J, Crystal Structure Of Archaeal Peroxiredoxin, Thioredoxin
Peroxidase From Aeropyrum Pernix K1 (Sulfonic Acid Form)
Length = 250
Score = 103 bits (258), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 103/176 (58%), Gaps = 9/176 (5%)
Query: 78 PLVGNTAPDFAAEAVFDQEFINVKLSD-YIGK-KYVILFFYPLDFTFVCPTEITAFSDRY 135
PL+G P+ E D I KL D Y+ + K+ +LF +P DFT V TE +F+ RY
Sbjct: 6 PLIGERFPEM--EVTTDHGVI--KLPDHYVSQGKWFVLFSHPADFTPVXTTEFVSFARRY 61
Query: 136 TEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQ 195
+F++L +++G+S DSVFSH+ W + + G+ + +P+IAD ++++ G+L +
Sbjct: 62 EDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGV-RIPFPIIADPQGTVARRLGLLHAES 120
Query: 196 GI-ALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPAGW 250
+RG+FI+D GVI+ + +GR VDE LR ++AL+ + ++ PA W
Sbjct: 121 ATHTVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKALK-LGDSLKRAVPADW 175
>pdb|2CV4|A Chain A, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|B Chain B, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|C Chain C, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|D Chain D, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|E Chain E, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|F Chain F, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|G Chain G, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|H Chain H, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|I Chain I, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
pdb|2CV4|J Chain J, Crystal Structure Of An Archaeal Peroxiredoxin From The
Aerobic Hyperthermophilic Crenarchaeon Aeropyrum Pernix
K1
Length = 250
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 102/176 (57%), Gaps = 9/176 (5%)
Query: 78 PLVGNTAPDFAAEAVFDQEFINVKLSD-YIGK-KYVILFFYPLDFTFVCPTEITAFSDRY 135
PL+G P+ E D I KL D Y+ + K+ +LF +P DFT V TE +F+ RY
Sbjct: 6 PLIGERFPE--XEVTTDHGVI--KLPDHYVSQGKWFVLFSHPADFTPVXTTEFVSFARRY 61
Query: 136 TEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQ 195
+F++L +++G+S DSVFSH+ W + + G+ + +P+IAD ++++ G+L +
Sbjct: 62 EDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGV-RIPFPIIADPQGTVARRLGLLHAES 120
Query: 196 GI-ALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPAGW 250
+RG+FI+D GVI+ +GR VDE LR ++AL+ + ++ PA W
Sbjct: 121 ATHTVRGVFIVDARGVIRTXLYYPXELGRLVDEILRIVKALK-LGDSLKRAVPADW 175
>pdb|2V2G|A Chain A, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Monoclinic Form
pdb|2V2G|B Chain B, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Monoclinic Form
pdb|2V2G|C Chain C, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Monoclinic Form
pdb|2V2G|D Chain D, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Monoclinic Form
pdb|2V32|A Chain A, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Monoclinic Form 2
pdb|2V32|B Chain B, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Monoclinic Form 2
pdb|2V32|C Chain C, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Monoclinic Form 2
pdb|2V32|D Chain D, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Monoclinic Form 2
pdb|2V41|A Chain A, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Orthorhombic Form
pdb|2V41|B Chain B, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Orthorhombic Form
pdb|2V41|C Chain C, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Orthorhombic Form
pdb|2V41|D Chain D, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Orthorhombic Form
pdb|2V41|E Chain E, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Orthorhombic Form
pdb|2V41|F Chain F, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Orthorhombic Form
pdb|2V41|G Chain G, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Orthorhombic Form
pdb|2V41|H Chain H, Crystal Structure Of The C45s Mutant Of The Peroxiredoxin
6 Of Arenicola Marina. Orthorhombic Form
Length = 233
Score = 94.0 bits (232), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 98/185 (52%), Gaps = 12/185 (6%)
Query: 80 VGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFE 139
+G P+F A++ + +K D++G + +LF +P DFT V TE+ +F+
Sbjct: 5 LGEVFPNFEADSTIGK----LKFHDWLGNSWGVLFSHPRDFTPVSTTELGRVIQLEGDFK 60
Query: 140 KLNTEILGVSTDSVFSHLAWVQTDRK-SGGLGDLKYPLIADITKSISKSYGVLIPDQ--- 195
K +++ +S D+V H W + + SG GD+ YP+IAD T+ ++ G++ PD+
Sbjct: 61 KRGVKLIALSCDNVADHKEWSEDVKCLSGVKGDMPYPIIADETRELAVKLGMVDPDERTS 120
Query: 196 -GIAL--RGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPAGWKP 252
G+ L R +FII + ++ S + GR+ E LR + +LQ + PA W+P
Sbjct: 121 TGMPLTCRAVFIIGPDKKLKLSILYPATTGRNFSEILRVIDSLQLTAQK-KVATPADWQP 179
Query: 253 GDKSM 257
GD+ M
Sbjct: 180 GDRCM 184
>pdb|1XCC|A Chain A, 1-Cys Peroxidoxin From Plasmodium Yoelli
pdb|1XCC|B Chain B, 1-Cys Peroxidoxin From Plasmodium Yoelli
pdb|1XCC|C Chain C, 1-Cys Peroxidoxin From Plasmodium Yoelli
pdb|1XCC|D Chain D, 1-Cys Peroxidoxin From Plasmodium Yoelli
Length = 220
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 90/184 (48%), Gaps = 11/184 (5%)
Query: 80 VGNTAPDFAAEAV-FDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEF 138
+G T P+F A+A D +F +L YI + ILF +P DFT VC TE+ + +F
Sbjct: 5 LGATFPNFTAKASGIDGDF---ELYKYIENSWAILFSHPNDFTPVCTTELAELGKMHEDF 61
Query: 139 EKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVL------I 192
KLN +++G S +S SH W++ + G L + P++ D ++ ++ ++ I
Sbjct: 62 LKLNCKLIGFSCNSKESHDKWIEDIKYYGKLNKWEIPIVCDESRELANKLKIMDEQEKDI 121
Query: 193 PDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPAGWKP 252
+ R LF I E I+ + + GR+ E LR L++LQ P P W
Sbjct: 122 TGLPLTCRCLFFISPEKKIKATVLYPATTGRNAHEILRVLKSLQLTYTTPVAT-PVNWNE 180
Query: 253 GDKS 256
GDK
Sbjct: 181 GDKC 184
>pdb|3TB2|A Chain A, 1-Cys Peroxidoxin From Plasmodium Yoelli
pdb|3TB2|B Chain B, 1-Cys Peroxidoxin From Plasmodium Yoelli
pdb|3TB2|C Chain C, 1-Cys Peroxidoxin From Plasmodium Yoelli
pdb|3TB2|D Chain D, 1-Cys Peroxidoxin From Plasmodium Yoelli
Length = 220
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 89/184 (48%), Gaps = 11/184 (5%)
Query: 80 VGNTAPDFAAEAV-FDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEF 138
+G T P+F A+A D +F +L YI + ILF +P DFT V TE+ + +F
Sbjct: 5 LGATFPNFTAKASGIDGDF---ELYKYIENSWAILFSHPNDFTPVXTTELAELGKMHEDF 61
Query: 139 EKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVL------I 192
KLN +++G S +S SH W++ + G L + P++ D ++ ++ ++ I
Sbjct: 62 LKLNCKLIGFSCNSKESHDKWIEDIKYYGKLNKWEIPIVCDESRELANKLKIMDEQEKDI 121
Query: 193 PDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPAGWKP 252
+ R LF I E I+ + + GR+ E LR L++LQ P P W
Sbjct: 122 TGLPLTCRCLFFISPEKKIKATVLYPATTGRNAHEILRVLKSLQLTYTTPVAT-PVNWNE 180
Query: 253 GDKS 256
GDK
Sbjct: 181 GDKC 184
>pdb|1PRX|A Chain A, Horf6 A Novel Human Peroxidase Enzyme
pdb|1PRX|B Chain B, Horf6 A Novel Human Peroxidase Enzyme
Length = 224
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 89/188 (47%), Gaps = 14/188 (7%)
Query: 79 LVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEF 138
L+G+ AP+F A + ++ D++G + ILF +P DFT V TE+ + EF
Sbjct: 6 LLGDVAPNFEANTTVGR----IRFHDFLGDSWGILFSHPRDFTPVXTTELGRAAKLAPEF 61
Query: 139 EKLNTEILGVSTDSVFSHLAW---VQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQ 195
K N +++ +S DSV HLAW + L +P+I D + ++ G+L P +
Sbjct: 62 AKRNVKLIALSIDSVEDHLAWSKDINAYNSEEPTEKLPFPIIDDRNRELAILLGMLDPAE 121
Query: 196 G------IALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPAG 249
+ R +F+ + ++ S + GR+ DE LR + +LQ E P
Sbjct: 122 KDEKGMPVTARVVFVFGPDKKLKLSILYPATTGRNFDEILRVVISLQLTAEK-RVATPVD 180
Query: 250 WKPGDKSM 257
WK GD M
Sbjct: 181 WKDGDSVM 188
>pdb|1XXU|A Chain A, Crystal Structure Of Ahpe From Mycrobacterium
Tuberculosis, A 1-Cys Peroxiredoxin
pdb|1XXU|B Chain B, Crystal Structure Of Ahpe From Mycrobacterium
Tuberculosis, A 1-Cys Peroxiredoxin
pdb|1XXU|C Chain C, Crystal Structure Of Ahpe From Mycrobacterium
Tuberculosis, A 1-Cys Peroxiredoxin
pdb|1XXU|D Chain D, Crystal Structure Of Ahpe From Mycrobacterium
Tuberculosis, A 1-Cys Peroxiredoxin
Length = 153
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 72/139 (51%), Gaps = 12/139 (8%)
Query: 80 VGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFE 139
VG TAPDF DQ V L Y G K V+L F+PL FT +C E+ D EFE
Sbjct: 4 VGATAPDFTLR---DQNQQLVTLRGYRGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFE 60
Query: 140 KLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADI--TKSISKSYGVLIPDQGI 197
++ L +S +H W +SG +PL++D ++S++YGV GI
Sbjct: 61 NDDSAALAISVGPPPTHKIWAT---QSG----FTFPLLSDFWPHGAVSQAYGVFNEQAGI 113
Query: 198 ALRGLFIIDKEGVIQHSTI 216
A RG F++D+ G+I+ + +
Sbjct: 114 ANRGTFVVDRSGIIRFAEM 132
>pdb|2YWN|A Chain A, Crystal Structure Of Peroxiredoxin-Like Protein From
Sulfolobus Tokodaii
pdb|4G2E|A Chain A, Crystal Structure Of A Dimeric Prxq From Sulfolobus
Tokodaii
Length = 157
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 77/144 (53%), Gaps = 16/144 (11%)
Query: 80 VGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFE 139
+G APDF D E VKLS GK V+L FYP FT VC E+ F D +F
Sbjct: 6 IGELAPDFELP---DTELKKVKLSALKGK-VVVLAFYPAAFTQVCTKEMCTFRDSMAKFN 61
Query: 140 KLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGV-----LIPD 194
++N +LG+S D FS+ A+ + ++ L + +++D + + K Y V +P
Sbjct: 62 QVNAVVLGISVDPPFSNKAFKEHNK-------LNFTILSDYNREVVKKYNVAWEFPALPG 114
Query: 195 QGIALRGLFIIDKEGVIQHSTINN 218
+A R +F+IDKEG +++ +++
Sbjct: 115 YVLAKRAVFVIDKEGKVRYKWVSD 138
>pdb|1XVW|A Chain A, Crystal Structure Of Ahpe From Mycobacterium Tuberculosis,
A 1-Cys Peroxiredoxin
pdb|1XVW|B Chain B, Crystal Structure Of Ahpe From Mycobacterium Tuberculosis,
A 1-Cys Peroxiredoxin
Length = 160
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 71/139 (51%), Gaps = 12/139 (8%)
Query: 80 VGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFE 139
VG TAPDF DQ V L Y G K V+L F+PL FT + E+ D EFE
Sbjct: 11 VGATAPDFTLR---DQNQQLVTLRGYRGAKNVLLVFFPLAFTGIXQGELDQLRDHLPEFE 67
Query: 140 KLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADI--TKSISKSYGVLIPDQGI 197
++ L +S +H W +SG +PL++D ++S++YGV GI
Sbjct: 68 NDDSAALAISVGPPPTHKIWAT---QSG----FTFPLLSDFWPHGAVSQAYGVFNEQAGI 120
Query: 198 ALRGLFIIDKEGVIQHSTI 216
A RG F++D+ G+I+ + +
Sbjct: 121 ANRGTFVVDRSGIIRFAEM 139
>pdb|3DRN|A Chain A, The Crystal Structure Of Bcp1 From Sulfolobus Sulfataricus
pdb|3DRN|B Chain B, The Crystal Structure Of Bcp1 From Sulfolobus Sulfataricus
Length = 161
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 84/159 (52%), Gaps = 16/159 (10%)
Query: 80 VGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFE 139
VG+ AP F A ++ + LSDYIGK ++L+FYP D T E +AF D + +
Sbjct: 4 VGDKAPLFEGIADNGEK---ISLSDYIGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLK 60
Query: 140 KLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIAL 199
+ ++GVS+D + SH + + + L + L++D K I + YG +G L
Sbjct: 61 DYDVVVIGVSSDDINSHKRFKEKYK-------LPFILVSDPDKKIRELYGA----KGFIL 109
Query: 200 --RGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQ 236
R F+IDK+G+I+H + + V+E L+ L+ ++
Sbjct: 110 PARITFVIDKKGIIRHIYNSQMNPANHVNEALKALKQIK 148
>pdb|3HJP|A Chain A, The Crystal Structure Of Bcp4 From Sulfolobus Solfataricus
pdb|3HJP|B Chain B, The Crystal Structure Of Bcp4 From Sulfolobus Solfataricus
pdb|3HJP|C Chain C, The Crystal Structure Of Bcp4 From Sulfolobus Solfataricus
pdb|3HJP|D Chain D, The Crystal Structure Of Bcp4 From Sulfolobus Solfataricus
Length = 164
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 79/144 (54%), Gaps = 17/144 (11%)
Query: 80 VGNTAPDFAAEAVFDQEFINVKL-SDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEF 138
+G AP+ + D + VK+ SD+ GK V+L FYP FT V E++ F D +F
Sbjct: 4 IGEKAPEIE---LVDTDLKKVKIPSDFKGK-VVVLAFYPAAFTSVSTKEMSTFRDSMAKF 59
Query: 139 EKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGV-----LIP 193
++N ++G+S D FS+ A+ + ++ + + +++D + K+YGV ++
Sbjct: 60 NEVNAVVIGISVDPPFSNKAFKEQNK-------INFTIVSDFNREAVKAYGVAGELPILK 112
Query: 194 DQGIALRGLFIIDKEGVIQHSTIN 217
+A R +F+IDK G++++ ++
Sbjct: 113 GYVLAKRSVFVIDKNGIVRYKWVS 136
>pdb|2CX3|A Chain A, Crystal Structure Of A Bacterioferritin Comigratory
Protein Peroxiredoxin From The Aeropyrum Pernix K1
(Form-1 Crystal)
pdb|2CX3|B Chain B, Crystal Structure Of A Bacterioferritin Comigratory
Protein Peroxiredoxin From The Aeropyrum Pernix K1
(Form-1 Crystal)
pdb|2CX3|C Chain C, Crystal Structure Of A Bacterioferritin Comigratory
Protein Peroxiredoxin From The Aeropyrum Pernix K1
(Form-1 Crystal)
pdb|2CX3|D Chain D, Crystal Structure Of A Bacterioferritin Comigratory
Protein Peroxiredoxin From The Aeropyrum Pernix K1
(Form-1 Crystal)
pdb|2CX4|A Chain A, Crystal Structure Of A Bacterioferritin Comigratory
Protein Peroxiredoxin From The Aeropyrum Pernix K1
(Form-2 Crystal)
pdb|2CX4|B Chain B, Crystal Structure Of A Bacterioferritin Comigratory
Protein Peroxiredoxin From The Aeropyrum Pernix K1
(Form-2 Crystal)
pdb|2CX4|C Chain C, Crystal Structure Of A Bacterioferritin Comigratory
Protein Peroxiredoxin From The Aeropyrum Pernix K1
(Form-2 Crystal)
pdb|2CX4|D Chain D, Crystal Structure Of A Bacterioferritin Comigratory
Protein Peroxiredoxin From The Aeropyrum Pernix K1
(Form-2 Crystal)
pdb|2CX4|E Chain E, Crystal Structure Of A Bacterioferritin Comigratory
Protein Peroxiredoxin From The Aeropyrum Pernix K1
(Form-2 Crystal)
pdb|2CX4|F Chain F, Crystal Structure Of A Bacterioferritin Comigratory
Protein Peroxiredoxin From The Aeropyrum Pernix K1
(Form-2 Crystal)
pdb|2CX4|G Chain G, Crystal Structure Of A Bacterioferritin Comigratory
Protein Peroxiredoxin From The Aeropyrum Pernix K1
(Form-2 Crystal)
pdb|2CX4|H Chain H, Crystal Structure Of A Bacterioferritin Comigratory
Protein Peroxiredoxin From The Aeropyrum Pernix K1
(Form-2 Crystal)
pdb|4GQF|A Chain A, Aeropyrum Pernix Peroxiredoxin Q Enzyme In The Locally
Unfolded Conformation
pdb|4GQF|B Chain B, Aeropyrum Pernix Peroxiredoxin Q Enzyme In The Locally
Unfolded Conformation
Length = 164
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 77/157 (49%), Gaps = 16/157 (10%)
Query: 80 VGNTAPDFAAEAVFDQEFINVKLSDYIGK-KYVILFFYPLDFTFVCPTEITAFSDRYTEF 138
+G APDF + +Q+F V L + + + + +L F+P F+ VC E+ F D+ +
Sbjct: 7 LGEKAPDFT---LPNQDFEPVNLYEVLKRGRPAVLIFFPAAFSPVCTKELCTFRDKXAQL 63
Query: 139 EKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPD---- 194
EK N E+L +S DS + + +R L + L++D + + K Y V D
Sbjct: 64 EKANAEVLAISVDSPWCLKKFKDENR-------LAFNLLSDYNREVIKLYNVYHEDLKGL 116
Query: 195 QGIALRGLFIIDKEGVIQHSTINNLAIGR-SVDETLR 230
+ +A R +FI+ +G + + + + + DE +R
Sbjct: 117 KXVAKRAVFIVKPDGTVAYKWVTDNPLNEPDYDEVVR 153
>pdb|4GQC|A Chain A, Crystal Structure Of Aeropyrum Pernix Peroxiredoxin Q
Enzyme In Fully- Folded And Locally-unfolded
Conformations
pdb|4GQC|B Chain B, Crystal Structure Of Aeropyrum Pernix Peroxiredoxin Q
Enzyme In Fully- Folded And Locally-unfolded
Conformations
pdb|4GQC|C Chain C, Crystal Structure Of Aeropyrum Pernix Peroxiredoxin Q
Enzyme In Fully- Folded And Locally-unfolded
Conformations
pdb|4GQC|D Chain D, Crystal Structure Of Aeropyrum Pernix Peroxiredoxin Q
Enzyme In Fully- Folded And Locally-unfolded
Conformations
Length = 164
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 77/157 (49%), Gaps = 16/157 (10%)
Query: 80 VGNTAPDFAAEAVFDQEFINVKLSDYIGK-KYVILFFYPLDFTFVCPTEITAFSDRYTEF 138
+G APDF + +Q+F V L + + + + +L F+P F+ VC E+ F D+ +
Sbjct: 7 LGEKAPDFT---LPNQDFEPVNLYEVLKRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQL 63
Query: 139 EKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPD---- 194
EK N E+L +S DS + + +R L + L++D + + K Y V D
Sbjct: 64 EKANAEVLAISVDSPWCLKKFKDENR-------LAFNLLSDYNREVIKLYNVYHEDLKGL 116
Query: 195 QGIALRGLFIIDKEGVIQHSTINNLAIGR-SVDETLR 230
+ +A R +FI+ +G + + + + + DE +R
Sbjct: 117 KMVAKRAVFIVKPDGTVAYKWVTDNPLNEPDYDEVVR 153
>pdb|3IXR|A Chain A, Crystal Structure Of Xylella Fastidiosa Prxq C47s Mutant
Length = 179
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 8/90 (8%)
Query: 102 LSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQ 161
LSDY ++++L+FYP D T TE F+ +FE++N +LGVS DSV SH ++
Sbjct: 46 LSDYT-NQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVSRDSVKSHDSFCA 104
Query: 162 TDRKSGGLGDLKYPLIADITKSISKSYGVL 191
K G +PL++D + K++ V+
Sbjct: 105 ---KQG----FTFPLVSDSDAILCKAFDVI 127
>pdb|3GKK|A Chain A, Insights Into The Alkyl Peroxide Reduction Activity Of
Xanthomonas Campestris Bacterioferritin Comigratory
Protein From The Trapped IntermediateLIGAND COMPLEX
STRUCTURES
Length = 163
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 65/133 (48%), Gaps = 18/133 (13%)
Query: 110 YVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGL 169
+++++FYP D T C TE F+ EF+K +ILGVS DSV SH + K G
Sbjct: 37 WLVIYFYPKDSTPGCTTEGLDFNALLPEFDKAGAKILGVSRDSVKSHDNFCA---KQG-- 91
Query: 170 GDLKYPLIADITKSISKSYGVLIPDQ-------GIALRGLFIIDKEG-VIQHSTINNLAI 221
+PL++D +++ +++ V+ GI R F++ EG V+Q + +
Sbjct: 92 --FAFPLVSDGDEALCRAFDVIKEKNMYGKQVLGIE-RSTFLLSPEGQVVQ--AWRKVKV 146
Query: 222 GRSVDETLRTLQA 234
D L L+A
Sbjct: 147 AGHADAVLAALKA 159
>pdb|3GKM|A Chain A, Insights Into The Alkyl Peroxide Reduction Activity Of
Xanthomonas Campestris Bacterioferritin Comigratory
Protein From The Trapped IntermediateLIGAND COMPLEX
STRUCTURES
Length = 163
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 18/133 (13%)
Query: 110 YVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGL 169
+++++FYP D T TE F+ EF+K +ILGVS DSV SH D S
Sbjct: 37 WLVIYFYPKDSTPGSTTEGLDFNALLPEFDKAGAKILGVSRDSVKSH------DNFSAKQ 90
Query: 170 GDLKYPLIADITKSISKSYGVLIPDQ-------GIALRGLFIIDKEG-VIQHSTINNLAI 221
G +PL++D +++ +++ V+ GI R F++ EG V+Q + +
Sbjct: 91 G-FAFPLVSDGDEALCRAFDVIKEKNMYGKQVLGIE-RSTFLLSPEGQVVQ--AWRKVKV 146
Query: 222 GRSVDETLRTLQA 234
D L L+A
Sbjct: 147 AGHADAVLAALKA 159
>pdb|3P7X|A Chain A, Crystal Structure Of An Atypical Two-Cysteine
Peroxiredoxin (Saouhsc_01822) From Staphylococcus Aureus
Nctc8325
pdb|3P7X|B Chain B, Crystal Structure Of An Atypical Two-Cysteine
Peroxiredoxin (Saouhsc_01822) From Staphylococcus Aureus
Nctc8325
pdb|3P7X|C Chain C, Crystal Structure Of An Atypical Two-Cysteine
Peroxiredoxin (Saouhsc_01822) From Staphylococcus Aureus
Nctc8325
pdb|3P7X|D Chain D, Crystal Structure Of An Atypical Two-Cysteine
Peroxiredoxin (Saouhsc_01822) From Staphylococcus Aureus
Nctc8325
Length = 166
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 12/136 (8%)
Query: 81 GNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEK 140
G+ APDF V D + V L+DY GKK +I +D T VC + F+ ++ E
Sbjct: 23 GDFAPDFT---VLDNDLNQVTLADYAGKKKLISVVPSID-TGVCDQQTRKFNSDASKEEG 78
Query: 141 LNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALR 200
+ +L +S D F+ W S GL ++ L S ++YGV++ + + R
Sbjct: 79 I---VLTISADLPFAQKRWC----ASAGLDNV-ITLSDHRDLSFGENYGVVMEELRLLAR 130
Query: 201 GLFIIDKEGVIQHSTI 216
+F++D + + + I
Sbjct: 131 AVFVLDADNKVVYKEI 146
>pdb|3GKN|A Chain A, Insights Into The Alkyl Peroxide Reduction Activity Of
Xanthomonas Campestris Bacterioferritin Comigratory
Protein From The Trapped Intermediate/ligand Complex
Structures
pdb|3GKN|B Chain B, Insights Into The Alkyl Peroxide Reduction Activity Of
Xanthomonas Campestris Bacterioferritin Comigratory
Protein From The Trapped Intermediate/ligand Complex
Structures
Length = 163
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 64/133 (48%), Gaps = 18/133 (13%)
Query: 110 YVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGL 169
+++++FYP D T TE F+ EF+K +ILGVS DSV SH + K G
Sbjct: 37 WLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRDSVKSHDNFCA---KQG-- 91
Query: 170 GDLKYPLIADITKSISKSYGVLIPDQ-------GIALRGLFIIDKEG-VIQHSTINNLAI 221
+PL++D +++ +++ V+ GI R F++ EG V+Q + +
Sbjct: 92 --FAFPLVSDGDEALCRAFDVIKEKNMYGKQVLGIE-RSTFLLSPEGQVVQ--AWRKVKV 146
Query: 222 GRSVDETLRTLQA 234
D L L+A
Sbjct: 147 AGHADAVLAALKA 159
>pdb|4EO3|A Chain A, Peroxiredoxin Nitroreductase Fusion Enzyme
pdb|4EO3|B Chain B, Peroxiredoxin Nitroreductase Fusion Enzyme
Length = 322
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 68/152 (44%), Gaps = 16/152 (10%)
Query: 109 KYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGG 168
KY ILFF+P T E FS FEK +++G+S DS V+ ++
Sbjct: 25 KYTILFFFPKAGTSGSTREAVEFS--RENFEK--AQVVGISRDS-------VEALKRFKE 73
Query: 169 LGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDET 228
DLK L++D + + + VL + G +R F+ID+ G ++ + + V E
Sbjct: 74 KNDLKVTLLSDPEGILHEFFNVL--ENGKTVRSTFLIDRWGFVR-KEWRRVKVEGHVQEV 130
Query: 229 LRTLQALQYVQENPDEVCPAGWKPGDKSMKPD 260
L L ++E+ W+ +++K D
Sbjct: 131 KEALDRL--IEEDLSLNKHIEWRRARRALKKD 160
>pdb|2JSY|A Chain A, Solution Structure Of Tpx In The Oxidized State
pdb|2JSZ|A Chain A, Solution Structure Of Tpx In The Reduced State
Length = 167
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 60/136 (44%), Gaps = 13/136 (9%)
Query: 80 VGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFE 139
VG+ APDF V L+D GK +I +D T VC + F++ +
Sbjct: 20 VGDQAPDFT---VLTNSLEEKSLADMKGKVTIISVIPSID-TGVCDAQTRRFNEEAAKLG 75
Query: 140 KLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITK-SISKSYGVLIPDQGIA 198
+N + +S D F+ W G G K ++D S +++GV I + +
Sbjct: 76 DVN--VYTISADLPFAQARWC------GANGIDKVETLSDHRDMSFGEAFGVYIKELRLL 127
Query: 199 LRGLFIIDKEGVIQHS 214
R +F++D+ G + ++
Sbjct: 128 ARSVFVLDENGKVVYA 143
>pdb|2YZH|A Chain A, Crystal Structure Of Peroxiredoxin-Like Protein From
Aquifex Aeolicus
pdb|2YZH|B Chain B, Crystal Structure Of Peroxiredoxin-Like Protein From
Aquifex Aeolicus
pdb|2YZH|C Chain C, Crystal Structure Of Peroxiredoxin-Like Protein From
Aquifex Aeolicus
pdb|2YZH|D Chain D, Crystal Structure Of Peroxiredoxin-Like Protein From
Aquifex Aeolicus
Length = 171
Score = 34.3 bits (77), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 60/137 (43%), Gaps = 15/137 (10%)
Query: 80 VGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFE 139
VG+ AP+ QE I D + VI+ LD T VC TE F++ E
Sbjct: 23 VGDRAPEAVVVTKDLQEKIVGGAKDVV---QVIITVPSLD-TPVCETETKKFNEIMAGME 78
Query: 140 KLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPD---QG 196
++ + VS D F+ + ++ + +D + YGVLI + +G
Sbjct: 79 GVDVTV--VSMDLPFAQKRFCES------FNIQNVTVASDFRYRDMEKYGVLIGEGALKG 130
Query: 197 IALRGLFIIDKEGVIQH 213
I R +FIIDKEG + +
Sbjct: 131 ILARAVFIIDKEGKVAY 147
>pdb|4HPV|A Chain A, Crystal Structure Of S-Adenosylmethionine Synthetase From
Sulfolobus Solfataricus 982
pdb|4HPV|B Chain B, Crystal Structure Of S-Adenosylmethionine Synthetase From
Sulfolobus Solfataricus 982
Length = 407
Score = 32.3 bits (72), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 67 SFVVKASVEIPPLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPT 126
S + K VE+ G PD+ A+AV ++ + KLS Y KKY ++ + LD T V
Sbjct: 15 SDIEKLQVELVERKGLGHPDYIADAVAEEA--SRKLSLYYLKKYGVILHHNLDKTLVVGG 72
Query: 127 EIT 129
+ T
Sbjct: 73 QAT 75
>pdb|2O3E|A Chain A, Crystal Structure Of Engineered Neurolysin With Thimet
Oligopeptidase Specificity For Neurotensin Cleavage Site
Length = 678
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 8/78 (10%)
Query: 133 DRYTEFEKLNTEILGVSTD------SVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISK 186
D +E+ K TEILGV+ + F HLA + G L + + D+ S K
Sbjct: 572 DAASEYAKYCTEILGVAATPGTNMPATFGHLAGGYDGQYYGYLWSEVFSM--DMFHSCFK 629
Query: 187 SYGVLIPDQGIALRGLFI 204
G++ P+ G+ R L +
Sbjct: 630 KEGIMNPEVGMKYRNLIL 647
>pdb|1I1I|P Chain P, Neurolysin (Endopeptidase 24.16) Crystal Structure
Length = 681
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 8/78 (10%)
Query: 133 DRYTEFEKLNTEILGVSTD------SVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISK 186
D +E+ K TEILGV+ + F HLA + G L + + D+ S K
Sbjct: 572 DAASEYAKYCTEILGVAATPGTNMPATFGHLAGGYDGQYYGYLWSEVFSM--DMFHSCFK 629
Query: 187 SYGVLIPDQGIALRGLFI 204
G++ P+ G+ R L +
Sbjct: 630 KEGIMNPEVGMKYRNLIL 647
>pdb|2A4V|A Chain A, Crystal Structure Of A Truncated Mutant Of Yeast Nuclear
Thiol Peroxidase
Length = 159
Score = 28.9 bits (63), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 46/101 (45%), Gaps = 12/101 (11%)
Query: 80 VGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFF-YPLDFTFVCPTEITAFSDRYTEF 138
+G+ PD + + +++ ++ L V++FF YP T + + F D Y E
Sbjct: 9 IGDPIPDLS---LLNEDNDSISLKKITENNRVVVFFVYPRASTPGSTRQASGFRDNYQEL 65
Query: 139 EKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIAD 179
++ + G+S DSV S +K +L Y L++D
Sbjct: 66 KEY-AAVFGLSADSVTSQ-------KKFQSKQNLPYHLLSD 98
>pdb|1HYH|A Chain A, Crystal Structure Of L-2-hydroxyisocaproate Dehydrogenase
From Lactobacillus Confusus At 2.2 Angstroms
Resolution-an Example Of Strong Asymmetry Between
Subunits
pdb|1HYH|B Chain B, Crystal Structure Of L-2-hydroxyisocaproate Dehydrogenase
From Lactobacillus Confusus At 2.2 Angstroms
Resolution-an Example Of Strong Asymmetry Between
Subunits
pdb|1HYH|C Chain C, Crystal Structure Of L-2-hydroxyisocaproate Dehydrogenase
From Lactobacillus Confusus At 2.2 Angstroms
Resolution-an Example Of Strong Asymmetry Between
Subunits
pdb|1HYH|D Chain D, Crystal Structure Of L-2-hydroxyisocaproate Dehydrogenase
From Lactobacillus Confusus At 2.2 Angstroms
Resolution-an Example Of Strong Asymmetry Between
Subunits
Length = 309
Score = 27.7 bits (60), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 5/53 (9%)
Query: 194 DQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQYVQENPDEVC 246
D G+ L II ++GV+ +T++ + DE + LQ+ Y+Q+ DE+
Sbjct: 259 DMGMYLSYPAIIGRDGVLAETTLD-----LTTDEQEKLLQSRDYIQQRFDEIV 306
>pdb|2HV8|D Chain D, Crystal Structure Of Gtp-Bound Rab11 In Complex With Fip3
pdb|2HV8|E Chain E, Crystal Structure Of Gtp-Bound Rab11 In Complex With Fip3
pdb|2HV8|F Chain F, Crystal Structure Of Gtp-Bound Rab11 In Complex With Fip3
Length = 64
Score = 27.3 bits (59), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 26/54 (48%)
Query: 61 GSRSRKSFVVKASVEIPPLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILF 114
GS ++ F S + + + + D EA+ QE IN +L DYI + V +
Sbjct: 1 GSGAKSLFSTAFSESLAAEISSVSRDELMEAIQKQEEINFRLQDYIDRIIVAIM 54
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.137 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,998,811
Number of Sequences: 62578
Number of extensions: 275877
Number of successful extensions: 659
Number of sequences better than 100.0: 67
Number of HSP's better than 100.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 539
Number of HSP's gapped (non-prelim): 67
length of query: 271
length of database: 14,973,337
effective HSP length: 97
effective length of query: 174
effective length of database: 8,903,271
effective search space: 1549169154
effective search space used: 1549169154
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 51 (24.3 bits)