Query 024201
Match_columns 271
No_of_seqs 305 out of 1435
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 04:09:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024201.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024201hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3sbc_A Peroxiredoxin TSA1; alp 100.0 1.3E-46 4.6E-51 319.3 22.2 195 74-270 19-213 (216)
2 3tue_A Tryparedoxin peroxidase 100.0 5.4E-45 1.9E-49 310.0 20.0 190 78-269 26-217 (219)
3 3tjj_A Peroxiredoxin-4; thiore 100.0 2.5E-42 8.5E-47 301.6 19.6 191 78-270 62-252 (254)
4 3qpm_A Peroxiredoxin; oxidored 100.0 1.8E-41 6.1E-46 293.9 22.5 191 78-270 48-238 (240)
5 2pn8_A Peroxiredoxin-4; thiore 100.0 6.1E-40 2.1E-44 278.9 21.8 191 78-270 19-209 (211)
6 1zye_A Thioredoxin-dependent p 100.0 1.8E-39 6.3E-44 277.6 21.1 196 72-270 22-217 (220)
7 1uul_A Tryparedoxin peroxidase 100.0 4.8E-39 1.6E-43 271.0 22.7 192 78-271 6-198 (202)
8 2i81_A 2-Cys peroxiredoxin; st 100.0 2.9E-39 9.9E-44 275.1 21.1 189 78-270 21-212 (213)
9 1qmv_A Human thioredoxin perox 100.0 3.6E-38 1.2E-42 264.5 21.9 191 78-270 5-195 (197)
10 2c0d_A Thioredoxin peroxidase 100.0 1.4E-38 4.9E-43 272.4 19.6 189 78-270 25-216 (221)
11 1n8j_A AHPC, alkyl hydroperoxi 100.0 3.2E-38 1.1E-42 263.0 20.7 178 79-262 2-181 (186)
12 3ztl_A Thioredoxin peroxidase; 100.0 1.1E-37 3.6E-42 267.0 21.2 185 76-262 38-222 (222)
13 2h01_A 2-Cys peroxiredoxin; th 100.0 1.1E-37 3.8E-42 260.3 18.5 188 79-270 1-191 (192)
14 2v2g_A Peroxiredoxin 6; oxidor 100.0 9.2E-38 3.2E-42 269.4 16.8 180 77-261 2-188 (233)
15 1xcc_A 1-Cys peroxiredoxin; un 100.0 2.6E-37 8.9E-42 264.4 16.3 189 77-268 2-199 (220)
16 1prx_A HORF6; peroxiredoxin, h 100.0 8.6E-37 3E-41 261.9 19.4 186 78-268 5-202 (224)
17 3a2v_A Probable peroxiredoxin; 100.0 2.7E-36 9.1E-41 262.3 18.6 181 78-266 5-194 (249)
18 1we0_A Alkyl hydroperoxide red 100.0 7.7E-36 2.6E-40 248.0 18.2 186 78-271 1-187 (187)
19 1zof_A Alkyl hydroperoxide-red 100.0 5E-35 1.7E-39 245.3 18.0 189 78-270 1-193 (198)
20 4g2e_A Peroxiredoxin; redox pr 100.0 3.8E-34 1.3E-38 232.0 14.3 149 75-235 2-156 (157)
21 2bmx_A Alkyl hydroperoxidase C 100.0 1.3E-32 4.5E-37 230.2 19.0 174 78-261 4-189 (195)
22 4gqc_A Thiol peroxidase, perox 100.0 1E-33 3.5E-38 231.3 8.0 148 78-236 5-159 (164)
23 3drn_A Peroxiredoxin, bacterio 100.0 8E-31 2.7E-35 212.6 17.6 152 78-241 2-153 (161)
24 3mng_A Peroxiredoxin-5, mitoch 100.0 1.1E-30 3.7E-35 215.4 15.1 150 75-235 12-173 (173)
25 3gkn_A Bacterioferritin comigr 100.0 1.7E-30 5.8E-35 210.4 15.5 147 78-236 7-161 (163)
26 3u5r_E Uncharacterized protein 100.0 2.3E-30 8E-35 220.5 16.6 160 78-254 32-209 (218)
27 3ixr_A Bacterioferritin comigr 100.0 2.8E-30 9.5E-35 213.5 15.3 147 78-236 21-177 (179)
28 1psq_A Probable thiol peroxida 100.0 1.3E-29 4.6E-34 205.9 17.6 145 78-235 16-163 (163)
29 3p7x_A Probable thiol peroxida 100.0 1.4E-29 4.6E-34 206.5 16.2 148 72-234 15-165 (166)
30 1xvw_A Hypothetical protein RV 100.0 2.7E-29 9.1E-34 202.6 16.5 151 75-236 7-159 (160)
31 1q98_A Thiol peroxidase, TPX; 100.0 2.6E-29 8.9E-34 204.7 15.1 142 78-232 17-164 (165)
32 1tp9_A Peroxiredoxin, PRX D (t 100.0 3.5E-29 1.2E-33 203.6 14.7 144 77-231 3-161 (162)
33 2yzh_A Probable thiol peroxida 100.0 6.5E-29 2.2E-33 203.2 16.2 150 71-235 15-170 (171)
34 3zrd_A Thiol peroxidase; oxido 100.0 5.4E-29 1.8E-33 209.7 15.9 148 71-232 46-199 (200)
35 3uma_A Hypothetical peroxiredo 100.0 3.3E-29 1.1E-33 208.5 13.9 149 73-231 21-183 (184)
36 2ywi_A Hypothetical conserved 100.0 1.8E-28 6.2E-33 204.1 17.3 161 78-254 18-196 (196)
37 2wfc_A Peroxiredoxin 5, PRDX5; 100.0 1.2E-28 4.2E-33 201.8 15.2 145 77-232 2-159 (167)
38 3keb_A Probable thiol peroxida 100.0 4E-28 1.4E-32 207.1 18.9 151 70-237 15-176 (224)
39 2cvb_A Probable thiol-disulfid 100.0 3.9E-28 1.3E-32 201.1 16.4 158 78-254 7-181 (188)
40 4f82_A Thioredoxin reductase; 100.0 3.5E-28 1.2E-32 200.1 14.9 148 75-232 8-174 (176)
41 1nm3_A Protein HI0572; hybrid, 100.0 2.1E-27 7.2E-32 204.9 16.4 148 77-235 2-165 (241)
42 4eo3_A Bacterioferritin comigr 100.0 9.2E-28 3.2E-32 216.1 14.5 168 82-270 2-169 (322)
43 2a4v_A Peroxiredoxin DOT5; yea 99.9 6.1E-28 2.1E-32 195.0 11.8 144 78-235 7-152 (159)
44 2xhf_A Peroxiredoxin 5; oxidor 99.9 1.2E-27 4.2E-32 196.3 12.3 146 77-233 13-170 (171)
45 2jsy_A Probable thiol peroxida 99.9 3E-27 1E-31 192.2 14.3 145 78-236 18-166 (167)
46 1xiy_A Peroxiredoxin, pfaop; a 99.9 2.9E-27 1E-31 196.2 13.5 148 78-234 1-179 (182)
47 1xvq_A Thiol peroxidase; thior 99.9 1.5E-26 5.2E-31 190.1 16.3 145 73-233 14-164 (175)
48 2pwj_A Mitochondrial peroxired 99.9 8.5E-27 2.9E-31 191.5 13.4 144 79-231 8-170 (171)
49 3fw2_A Thiol-disulfide oxidore 99.9 1.1E-25 3.7E-30 179.6 16.7 134 78-236 5-147 (150)
50 3gl3_A Putative thiol:disulfid 99.9 3E-25 1E-29 176.7 19.3 139 77-236 2-141 (152)
51 3ewl_A Uncharacterized conserv 99.9 7.3E-26 2.5E-30 178.5 14.7 132 79-235 2-139 (142)
52 2lrn_A Thiol:disulfide interch 99.9 2.5E-25 8.5E-30 177.9 16.9 135 77-236 2-140 (152)
53 3kcm_A Thioredoxin family prot 99.9 3.1E-25 1.1E-29 177.0 17.3 142 78-239 2-145 (154)
54 1xzo_A BSSCO, hypothetical pro 99.9 2.6E-25 9E-30 181.1 16.9 146 77-236 6-171 (174)
55 3eyt_A Uncharacterized protein 99.9 1.5E-25 5.2E-30 179.8 14.4 137 80-236 2-151 (158)
56 4fo5_A Thioredoxin-like protei 99.9 6.5E-26 2.2E-30 179.5 11.5 120 78-216 7-131 (143)
57 3eur_A Uncharacterized protein 99.9 2E-25 7E-30 176.4 14.2 131 78-233 5-141 (142)
58 3hcz_A Possible thiol-disulfid 99.9 9.8E-26 3.4E-30 178.2 11.8 137 77-235 4-144 (148)
59 2f9s_A Thiol-disulfide oxidore 99.9 6.5E-25 2.2E-29 175.0 16.3 136 79-236 1-137 (151)
60 3lor_A Thiol-disulfide isomera 99.9 3.6E-25 1.2E-29 177.8 14.2 137 79-236 4-154 (160)
61 2hyx_A Protein DIPZ; thioredox 99.9 7.4E-25 2.5E-29 199.2 17.3 169 78-269 51-231 (352)
62 2l5o_A Putative thioredoxin; s 99.9 2.2E-24 7.5E-29 171.9 17.6 138 78-237 2-141 (153)
63 3lwa_A Secreted thiol-disulfid 99.9 1.5E-24 5.1E-29 178.7 17.1 140 78-236 31-180 (183)
64 3fkf_A Thiol-disulfide oxidore 99.9 1.6E-24 5.5E-29 171.2 15.6 133 78-235 5-144 (148)
65 1jfu_A Thiol:disulfide interch 99.9 2.2E-24 7.6E-29 178.0 16.2 143 78-236 34-179 (186)
66 3kh7_A Thiol:disulfide interch 99.9 1.6E-24 5.6E-29 178.1 15.3 135 75-235 27-165 (176)
67 2b7k_A SCO1 protein; metalloch 99.9 7.4E-25 2.5E-29 184.0 13.4 160 78-251 13-195 (200)
68 3hdc_A Thioredoxin family prot 99.9 8.6E-25 2.9E-29 176.0 13.3 137 78-236 15-151 (158)
69 2v1m_A Glutathione peroxidase; 99.9 1.7E-24 5.7E-29 175.4 14.8 141 78-235 5-165 (169)
70 2p31_A CL683, glutathione pero 99.9 9E-25 3.1E-29 180.4 12.4 136 78-235 23-179 (181)
71 2lrt_A Uncharacterized protein 99.9 1.1E-24 3.9E-29 174.7 12.2 132 78-232 9-143 (152)
72 3or5_A Thiol:disulfide interch 99.9 1.2E-23 4.1E-28 169.5 18.0 142 78-236 8-150 (165)
73 2obi_A PHGPX, GPX-4, phospholi 99.9 1.5E-24 5.1E-29 179.1 12.2 140 78-234 21-181 (183)
74 3kij_A Probable glutathione pe 99.9 4.3E-24 1.5E-28 176.0 14.9 144 79-237 13-174 (180)
75 2p5q_A Glutathione peroxidase 99.9 3.1E-24 1.1E-28 173.9 13.1 138 78-235 6-166 (170)
76 3raz_A Thioredoxin-related pro 99.9 7E-24 2.4E-28 169.2 14.8 134 83-239 4-142 (151)
77 3erw_A Sporulation thiol-disul 99.9 9.8E-24 3.4E-28 165.9 15.4 132 78-232 9-144 (145)
78 3me7_A Putative uncharacterize 99.9 5.7E-24 2E-28 174.1 14.6 147 79-237 2-162 (170)
79 2gs3_A PHGPX, GPX-4, phospholi 99.9 2.7E-24 9.3E-29 178.1 12.2 140 78-234 23-183 (185)
80 2vup_A Glutathione peroxidase- 99.9 3.9E-24 1.3E-28 177.8 13.1 137 78-236 22-184 (190)
81 2ggt_A SCO1 protein homolog, m 99.9 1.9E-23 6.3E-28 168.4 16.6 132 83-236 2-160 (164)
82 4hde_A SCO1/SENC family lipopr 99.9 3.2E-23 1.1E-27 169.8 17.6 146 80-236 8-169 (170)
83 2b5x_A YKUV protein, TRXY; thi 99.9 9E-24 3.1E-28 166.6 13.5 138 78-236 1-144 (148)
84 2f8a_A Glutathione peroxidase 99.9 1.9E-23 6.6E-28 176.7 15.2 148 78-235 20-205 (208)
85 2rli_A SCO2 protein homolog, m 99.9 1E-22 3.5E-27 165.2 18.9 138 85-238 7-165 (171)
86 2i3y_A Epididymal secretory gl 99.9 3.7E-23 1.3E-27 176.0 16.7 141 79-236 30-210 (215)
87 3dwv_A Glutathione peroxidase- 99.9 2.1E-24 7.2E-29 179.1 8.7 137 78-235 20-181 (187)
88 2lja_A Putative thiol-disulfid 99.9 2.2E-23 7.7E-28 165.8 14.3 138 77-236 2-142 (152)
89 3ha9_A Uncharacterized thiored 99.9 1.5E-23 5.1E-28 169.6 13.3 132 78-235 11-162 (165)
90 3ia1_A THIO-disulfide isomeras 99.9 1.4E-23 4.9E-28 167.5 12.2 133 78-236 5-143 (154)
91 2k6v_A Putative cytochrome C o 99.9 1.3E-23 4.3E-28 170.6 11.6 142 78-235 10-171 (172)
92 2r37_A Glutathione peroxidase 99.9 1E-22 3.5E-27 172.2 17.0 140 80-236 13-192 (207)
93 4evm_A Thioredoxin family prot 99.9 1.3E-22 4.6E-27 157.2 15.4 130 83-235 1-137 (138)
94 1zzo_A RV1677; thioredoxin fol 99.9 2.6E-22 8.9E-27 155.8 16.6 131 80-235 1-133 (136)
95 1lu4_A Soluble secreted antige 99.9 2.4E-22 8.1E-27 156.4 15.6 131 83-235 3-134 (136)
96 2ls5_A Uncharacterized protein 99.8 4.9E-25 1.7E-29 177.3 0.0 139 78-234 7-148 (159)
97 3cmi_A Peroxiredoxin HYR1; thi 99.9 1.4E-23 4.8E-28 171.3 8.6 133 80-235 8-166 (171)
98 2b1k_A Thiol:disulfide interch 99.9 2.7E-22 9.1E-27 162.7 14.1 134 78-235 22-158 (168)
99 1i5g_A Tryparedoxin II; electr 99.9 3.1E-22 1.1E-26 158.2 12.3 119 80-215 3-126 (144)
100 1o8x_A Tryparedoxin, TRYX, TXN 99.9 3.7E-22 1.2E-26 158.3 11.5 138 79-253 3-145 (146)
101 1kng_A Thiol:disulfide interch 99.9 6.2E-22 2.1E-26 157.9 10.8 133 78-235 8-150 (156)
102 2h30_A Thioredoxin, peptide me 99.9 6.4E-22 2.2E-26 159.3 8.6 133 79-235 15-154 (164)
103 1o73_A Tryparedoxin; electron 99.9 1.3E-21 4.3E-26 154.4 10.0 119 79-215 3-126 (144)
104 3s9f_A Tryparedoxin; thioredox 99.8 5.5E-22 1.9E-26 161.4 4.9 120 78-215 22-146 (165)
105 2lus_A Thioredoxion; CR-Trp16, 99.7 2.1E-22 7.1E-27 158.4 0.0 121 82-216 2-126 (143)
106 4h86_A Peroxiredoxin type-2; o 99.8 4.8E-18 1.6E-22 140.9 14.1 152 75-231 23-198 (199)
107 2l57_A Uncharacterized protein 99.6 1.1E-14 3.9E-19 112.0 9.3 111 83-235 5-115 (126)
108 2ju5_A Thioredoxin disulfide i 99.5 5.7E-15 1.9E-19 118.4 6.6 125 78-236 24-151 (154)
109 2fwh_A Thiol:disulfide interch 99.5 1.3E-15 4.5E-20 119.1 2.8 118 79-236 5-127 (134)
110 3hxs_A Thioredoxin, TRXP; elec 99.5 7.3E-13 2.5E-17 103.7 12.5 100 94-235 38-137 (141)
111 3fk8_A Disulphide isomerase; A 99.4 1.1E-12 3.7E-17 101.8 10.4 99 103-235 25-131 (133)
112 3ul3_B Thioredoxin, thioredoxi 99.4 1.1E-12 3.9E-17 101.2 9.8 107 80-233 20-126 (128)
113 2kuc_A Putative disulphide-iso 99.4 2.2E-12 7.5E-17 99.4 9.2 99 99-236 19-120 (130)
114 2pu9_C TRX-F, thioredoxin F-ty 99.3 9.9E-12 3.4E-16 93.1 11.2 89 104-235 21-109 (111)
115 3f9u_A Putative exported cytoc 99.3 2.3E-14 7.8E-19 116.5 -4.1 122 99-235 39-164 (172)
116 2l5l_A Thioredoxin; structural 99.3 1.4E-11 4.9E-16 96.1 11.4 90 106-236 36-125 (136)
117 3gix_A Thioredoxin-like protei 99.3 9.4E-12 3.2E-16 99.1 9.6 110 107-254 23-138 (149)
118 3zzx_A Thioredoxin; oxidoreduc 99.3 2E-11 7E-16 91.6 10.7 89 102-234 15-103 (105)
119 2voc_A Thioredoxin; electron t 99.3 2.3E-11 7.7E-16 91.6 10.7 88 106-235 16-103 (112)
120 3qfa_C Thioredoxin; protein-pr 99.3 1.9E-11 6.4E-16 92.9 9.5 89 103-235 27-115 (116)
121 3d6i_A Monothiol glutaredoxin- 99.3 6.6E-11 2.3E-15 88.6 12.1 87 107-235 21-107 (112)
122 3p2a_A Thioredoxin 2, putative 99.3 3.3E-11 1.1E-15 95.2 10.4 112 80-236 31-142 (148)
123 1faa_A Thioredoxin F; electron 99.2 3.2E-11 1.1E-15 92.1 9.8 89 104-235 34-122 (124)
124 3f3q_A Thioredoxin-1; His TAG, 99.2 5.8E-11 2E-15 89.0 10.9 85 107-235 24-108 (109)
125 1qgv_A Spliceosomal protein U5 99.2 4.6E-11 1.6E-15 94.3 10.7 107 107-251 23-135 (142)
126 1thx_A Thioredoxin, thioredoxi 99.2 1.4E-10 4.7E-15 86.9 12.6 86 109-235 26-111 (115)
127 3die_A Thioredoxin, TRX; elect 99.2 7.7E-11 2.6E-15 86.9 10.9 87 106-234 18-104 (106)
128 1t00_A Thioredoxin, TRX; redox 99.2 8.1E-11 2.8E-15 88.0 10.9 86 109-235 24-109 (112)
129 3d22_A TRXH4, thioredoxin H-ty 99.2 2.1E-11 7.3E-16 95.1 7.9 94 99-236 38-131 (139)
130 1xfl_A Thioredoxin H1; AT3G510 99.2 7.3E-11 2.5E-15 90.7 10.8 86 106-235 37-122 (124)
131 1w4v_A Thioredoxin, mitochondr 99.2 1E-10 3.4E-15 89.0 11.4 87 107-235 31-117 (119)
132 1dby_A Chloroplast thioredoxin 99.2 1.4E-10 4.7E-15 85.9 11.8 86 109-235 20-105 (107)
133 3cxg_A Putative thioredoxin; m 99.2 2.1E-11 7.2E-16 95.0 7.3 93 99-235 32-127 (133)
134 1nsw_A Thioredoxin, TRX; therm 99.2 5.8E-11 2E-15 87.7 9.3 85 109-234 18-102 (105)
135 1x5d_A Protein disulfide-isome 99.2 1.9E-10 6.5E-15 88.5 12.5 89 109-237 26-117 (133)
136 2i4a_A Thioredoxin; acidophIle 99.2 1.6E-10 5.5E-15 85.3 11.5 87 108-235 20-106 (107)
137 2trx_A Thioredoxin; electron t 99.2 1.6E-10 5.5E-15 85.7 11.4 87 108-235 20-106 (108)
138 3tco_A Thioredoxin (TRXA-1); d 99.2 1.7E-10 5.9E-15 85.4 11.4 88 106-235 20-107 (109)
139 2vlu_A Thioredoxin, thioredoxi 99.2 5E-11 1.7E-15 90.7 8.6 109 80-235 8-118 (122)
140 1z6n_A Hypothetical protein PA 99.2 1.3E-11 4.3E-16 100.6 5.4 80 101-215 48-127 (167)
141 2j23_A Thioredoxin; immune pro 99.2 1.4E-10 4.8E-15 88.5 10.5 88 106-235 32-119 (121)
142 1ep7_A Thioredoxin CH1, H-type 99.2 1.9E-10 6.4E-15 85.9 10.9 86 107-235 24-109 (112)
143 2e0q_A Thioredoxin; electron t 99.2 2.2E-10 7.6E-15 83.8 11.0 87 106-235 15-101 (104)
144 2o8v_B Thioredoxin 1; disulfid 99.2 9E-11 3.1E-15 90.8 9.2 87 108-235 40-126 (128)
145 3qou_A Protein YBBN; thioredox 99.2 7.8E-11 2.7E-15 103.0 9.9 75 106-218 25-99 (287)
146 4euy_A Uncharacterized protein 99.2 8.6E-11 2.9E-15 87.2 8.0 85 109-235 19-103 (105)
147 1fb6_A Thioredoxin M; electron 99.2 1.9E-10 6.5E-15 84.6 9.8 87 108-235 18-104 (105)
148 2wz9_A Glutaredoxin-3; protein 99.2 2.4E-10 8.1E-15 91.0 11.0 87 106-236 31-117 (153)
149 2xc2_A Thioredoxinn; oxidoredu 99.2 1.4E-10 4.7E-15 87.7 9.1 89 102-235 28-116 (117)
150 1xwb_A Thioredoxin; dimerizati 99.2 2.5E-10 8.5E-15 84.1 10.3 89 103-234 16-104 (106)
151 2vim_A Thioredoxin, TRX; thior 99.2 3.1E-10 1.1E-14 83.3 10.7 89 103-235 15-103 (104)
152 2ppt_A Thioredoxin-2; thiredox 99.2 3.2E-10 1.1E-14 90.7 11.6 86 109-235 65-150 (155)
153 1x5e_A Thioredoxin domain cont 99.2 2.7E-10 9.2E-15 87.2 10.7 86 110-236 24-109 (126)
154 3m9j_A Thioredoxin; oxidoreduc 99.1 2.8E-10 9.6E-15 83.8 10.1 89 103-235 16-104 (105)
155 3gnj_A Thioredoxin domain prot 99.1 4.9E-10 1.7E-14 83.3 11.5 86 109-235 23-108 (111)
156 2yzu_A Thioredoxin; redox prot 99.1 4.1E-10 1.4E-14 83.2 10.7 87 107-235 18-104 (109)
157 2oe3_A Thioredoxin-3; electron 99.1 2.3E-10 7.9E-15 86.6 9.4 84 106-233 29-112 (114)
158 1sen_A Thioredoxin-like protei 99.1 5.6E-12 1.9E-16 102.0 0.3 104 99-236 38-147 (164)
159 2dml_A Protein disulfide-isome 99.1 3.8E-10 1.3E-14 86.7 10.7 87 109-235 36-122 (130)
160 3hz4_A Thioredoxin; NYSGXRC, P 99.1 6.2E-10 2.1E-14 87.2 11.9 88 108-236 24-111 (140)
161 1gh2_A Thioredoxin-like protei 99.1 4.2E-10 1.4E-14 83.6 10.4 86 106-235 20-105 (107)
162 2vm1_A Thioredoxin, thioredoxi 99.1 4.2E-10 1.4E-14 84.6 10.5 86 106-235 27-112 (118)
163 2av4_A Thioredoxin-like protei 99.1 6.5E-10 2.2E-14 88.9 11.5 108 107-251 40-155 (160)
164 2l6c_A Thioredoxin; oxidoreduc 99.1 4.9E-10 1.7E-14 84.0 10.2 88 106-235 17-104 (110)
165 3emx_A Thioredoxin; structural 99.1 1.7E-10 5.8E-15 89.9 7.9 93 110-236 33-125 (135)
166 2dj1_A Protein disulfide-isome 99.1 2E-10 6.8E-15 89.4 8.2 88 107-236 34-123 (140)
167 1r26_A Thioredoxin; redox-acti 99.1 5.1E-10 1.7E-14 86.2 10.4 87 106-236 36-122 (125)
168 2f51_A Thioredoxin; electron t 99.1 3.5E-10 1.2E-14 86.0 9.3 87 107-236 23-112 (118)
169 2lst_A Thioredoxin; structural 98.7 9.4E-12 3.2E-16 95.9 0.0 100 97-235 9-114 (130)
170 2dj3_A Protein disulfide-isome 99.1 1.7E-10 5.9E-15 89.0 7.1 91 107-235 25-116 (133)
171 1ti3_A Thioredoxin H, PTTRXH1; 99.1 4.6E-10 1.6E-14 83.8 9.2 86 106-235 25-110 (113)
172 1syr_A Thioredoxin; SGPP, stru 99.1 8.5E-10 2.9E-14 82.7 10.0 85 106-234 25-109 (112)
173 1v98_A Thioredoxin; oxidoreduc 99.1 1.5E-09 5.2E-14 84.7 11.6 88 106-235 49-136 (140)
174 3uvt_A Thioredoxin domain-cont 99.1 7.9E-10 2.7E-14 82.1 9.3 87 107-234 21-109 (111)
175 3aps_A DNAJ homolog subfamily 99.1 5.1E-10 1.8E-14 85.0 8.3 92 108-236 21-112 (122)
176 3dxb_A Thioredoxin N-terminall 99.0 1.1E-09 3.7E-14 92.7 10.1 88 108-236 30-117 (222)
177 2qsi_A Putative hydrogenase ex 99.0 2.3E-09 7.7E-14 84.1 11.1 87 109-236 34-122 (137)
178 3h79_A Thioredoxin-like protei 99.0 2.1E-09 7E-14 82.5 10.7 90 107-235 33-126 (127)
179 1zma_A Bacterocin transport ac 99.0 1.6E-09 5.4E-14 82.0 9.9 88 107-232 29-116 (118)
180 3apq_A DNAJ homolog subfamily 99.0 4.5E-10 1.6E-14 94.0 7.3 90 105-236 112-201 (210)
181 2i1u_A Thioredoxin, TRX, MPT46 99.0 1.3E-09 4.5E-14 82.3 9.1 84 109-233 31-114 (121)
182 2dbc_A PDCL2, unnamed protein 99.0 1.9E-09 6.6E-14 84.0 8.9 86 109-235 31-119 (135)
183 2qgv_A Hydrogenase-1 operon pr 99.0 1E-09 3.6E-14 86.3 7.1 88 109-236 35-124 (140)
184 1mek_A Protein disulfide isome 98.9 3.3E-10 1.1E-14 85.1 3.4 89 106-235 23-115 (120)
185 2dj0_A Thioredoxin-related tra 98.9 3.3E-09 1.1E-13 82.5 9.2 84 106-220 25-108 (137)
186 1oaz_A Thioredoxin 1; immune s 98.9 1.1E-09 3.8E-14 84.0 6.3 86 108-234 21-120 (123)
187 3ph9_A Anterior gradient prote 98.9 3.4E-10 1.2E-14 90.6 3.2 98 101-235 38-143 (151)
188 3idv_A Protein disulfide-isome 98.9 3.7E-09 1.3E-13 89.5 9.5 89 106-236 31-121 (241)
189 2djj_A PDI, protein disulfide- 98.9 2.2E-09 7.4E-14 81.2 7.0 87 106-235 24-115 (121)
190 1wou_A Thioredoxin -related pr 98.9 1.8E-09 6.3E-14 82.6 6.4 80 103-212 20-106 (123)
191 1nho_A Probable thioredoxin; b 98.9 3.5E-09 1.2E-13 74.8 7.4 80 110-234 3-82 (85)
192 2yj7_A LPBCA thioredoxin; oxid 98.4 1.5E-10 5E-15 85.1 0.0 73 108-217 19-91 (106)
193 3t58_A Sulfhydryl oxidase 1; o 98.9 5E-09 1.7E-13 99.6 10.2 94 106-236 28-126 (519)
194 1a8l_A Protein disulfide oxido 98.9 2.3E-08 8E-13 83.9 13.0 86 110-235 136-224 (226)
195 1fo5_A Thioredoxin; disulfide 98.9 3.8E-09 1.3E-13 74.7 6.6 80 110-234 4-83 (85)
196 3q6o_A Sulfhydryl oxidase 1; p 98.9 1E-08 3.5E-13 87.6 10.5 93 109-236 31-126 (244)
197 3ira_A Conserved protein; meth 98.9 2E-08 6.7E-13 82.0 11.3 107 99-235 31-145 (173)
198 2hls_A Protein disulfide oxido 98.8 4.7E-08 1.6E-12 83.9 13.1 89 104-237 135-226 (243)
199 1wmj_A Thioredoxin H-type; str 98.8 6.8E-10 2.3E-14 85.0 1.3 86 106-235 35-120 (130)
200 2es7_A Q8ZP25_salty, putative 98.8 4.1E-09 1.4E-13 83.2 5.5 85 110-236 36-124 (142)
201 1ilo_A Conserved hypothetical 98.7 6.2E-08 2.1E-12 67.1 9.3 62 111-214 2-63 (77)
202 1a0r_P Phosducin, MEKA, PP33; 98.7 1E-08 3.5E-13 88.3 6.1 91 107-237 133-226 (245)
203 3iv4_A Putative oxidoreductase 98.7 2E-08 6.7E-13 75.9 6.8 75 108-217 24-99 (112)
204 3ed3_A Protein disulfide-isome 98.7 5.6E-08 1.9E-12 86.0 10.4 92 109-235 36-140 (298)
205 3evi_A Phosducin-like protein 98.7 6.9E-08 2.4E-12 73.8 8.4 83 110-233 25-110 (118)
206 3kp8_A Vkorc1/thioredoxin doma 98.7 2.3E-09 7.8E-14 80.4 -0.3 88 98-232 3-90 (106)
207 3idv_A Protein disulfide-isome 98.7 1.8E-07 6E-12 79.0 11.1 87 107-235 147-235 (241)
208 1sji_A Calsequestrin 2, calseq 98.6 1.5E-07 5E-12 84.8 10.2 84 109-234 29-119 (350)
209 2r2j_A Thioredoxin domain-cont 98.6 2.6E-07 8.7E-12 84.3 11.7 89 107-235 22-115 (382)
210 2trc_P Phosducin, MEKA, PP33; 98.6 5.2E-08 1.8E-12 82.3 5.6 88 107-234 120-210 (217)
211 3f8u_A Protein disulfide-isome 98.6 4.2E-08 1.4E-12 91.9 5.3 88 107-235 370-459 (481)
212 2b5e_A Protein disulfide-isome 98.5 3E-07 1E-11 86.6 10.2 87 109-235 32-120 (504)
213 2ywm_A Glutaredoxin-like prote 98.5 6.6E-07 2.2E-11 75.3 10.7 82 110-236 138-219 (229)
214 3f8u_A Protein disulfide-isome 98.5 4.1E-07 1.4E-11 85.1 10.2 86 109-235 22-107 (481)
215 3dml_A Putative uncharacterize 98.5 9.3E-08 3.2E-12 72.8 4.7 89 110-236 20-109 (116)
216 3gyk_A 27KDA outer membrane pr 98.5 2.9E-07 1E-11 74.2 7.3 46 99-148 14-59 (175)
217 2dlx_A UBX domain-containing p 98.4 4.1E-06 1.4E-10 66.8 13.3 91 106-236 41-135 (153)
218 3ga4_A Dolichyl-diphosphooligo 98.4 3.1E-06 1.1E-10 69.2 12.2 103 110-250 39-164 (178)
219 3apo_A DNAJ homolog subfamily 98.4 8.5E-07 2.9E-11 87.9 10.5 91 102-235 450-540 (780)
220 3qcp_A QSOX from trypanosoma b 98.4 3.1E-07 1.1E-11 85.8 6.6 66 110-210 44-116 (470)
221 3apo_A DNAJ homolog subfamily 98.4 4.5E-07 1.5E-11 89.9 7.7 91 108-235 675-765 (780)
222 3uem_A Protein disulfide-isome 98.4 7.2E-07 2.4E-11 80.3 7.5 85 108-233 267-353 (361)
223 1eej_A Thiol:disulfide interch 98.3 1.3E-06 4.6E-11 73.3 8.2 116 99-236 78-210 (216)
224 3us3_A Calsequestrin-1; calciu 98.2 9.3E-06 3.2E-10 73.6 11.9 87 108-235 30-122 (367)
225 3hd5_A Thiol:disulfide interch 98.2 2.2E-06 7.6E-11 70.3 7.0 43 106-151 24-66 (195)
226 3h93_A Thiol:disulfide interch 98.1 6.2E-06 2.1E-10 67.4 8.2 42 106-150 24-65 (192)
227 2b5e_A Protein disulfide-isome 98.1 1E-06 3.4E-11 83.0 3.8 86 107-235 376-465 (504)
228 1v58_A Thiol:disulfide interch 98.0 1.5E-05 5.3E-10 68.0 8.8 120 100-235 90-231 (241)
229 2k8s_A Thioredoxin; dimer, str 98.0 8.8E-06 3E-10 57.0 5.9 65 112-214 4-68 (80)
230 1a8l_A Protein disulfide oxido 98.0 3.6E-05 1.2E-09 64.2 10.5 70 105-211 20-90 (226)
231 2rem_A Disulfide oxidoreductas 97.9 5.9E-05 2E-09 61.4 9.6 42 106-150 24-65 (193)
232 2znm_A Thiol:disulfide interch 97.9 3.7E-05 1.3E-09 62.8 8.2 42 106-150 21-62 (195)
233 2djk_A PDI, protein disulfide- 97.8 4.1E-05 1.4E-09 58.9 7.2 91 106-236 21-114 (133)
234 1wjk_A C330018D20RIK protein; 97.8 3E-05 1E-09 57.0 5.9 87 99-233 6-92 (100)
235 1hyu_A AHPF, alkyl hydroperoxi 97.8 0.00013 4.4E-09 69.1 11.5 80 107-233 117-196 (521)
236 1ego_A Glutaredoxin; electron 97.8 6E-05 2E-09 52.8 7.0 66 112-213 3-70 (85)
237 2e7p_A Glutaredoxin; thioredox 97.8 2.5E-05 8.5E-10 58.2 5.0 67 110-215 21-87 (116)
238 1z6m_A Conserved hypothetical 97.8 0.00025 8.5E-09 56.8 11.0 50 99-150 19-69 (175)
239 2ywm_A Glutaredoxin-like prote 97.8 0.00014 4.9E-09 60.7 9.8 73 110-217 22-99 (229)
240 1t3b_A Thiol:disulfide interch 97.7 0.0001 3.6E-09 61.4 8.0 105 106-235 85-209 (211)
241 2fgx_A Putative thioredoxin; N 97.7 6.9E-05 2.3E-09 56.0 6.0 64 110-213 30-93 (107)
242 1ttz_A Conserved hypothetical 97.7 5.8E-05 2E-09 54.1 5.4 73 112-235 3-75 (87)
243 3uem_A Protein disulfide-isome 97.5 0.001 3.4E-08 59.5 11.7 93 110-236 137-229 (361)
244 3hz8_A Thiol:disulfide interch 97.2 0.00091 3.1E-08 54.7 7.6 42 107-151 24-65 (193)
245 2qc7_A ERP31, ERP28, endoplasm 97.1 0.0021 7E-08 54.8 9.2 91 108-235 22-117 (240)
246 3kp9_A Vkorc1/thioredoxin doma 97.0 0.00055 1.9E-08 60.0 5.0 87 99-232 189-275 (291)
247 4dvc_A Thiol:disulfide interch 96.9 0.0042 1.4E-07 49.5 8.9 39 107-148 21-59 (184)
248 2hls_A Protein disulfide oxido 96.9 0.0043 1.5E-07 52.6 9.1 63 110-209 27-95 (243)
249 2cq9_A GLRX2 protein, glutared 96.7 0.0047 1.6E-07 47.2 7.4 65 112-214 29-93 (130)
250 2lqo_A Putative glutaredoxin R 96.6 0.021 7.2E-07 41.0 9.6 81 112-239 6-86 (92)
251 3gv1_A Disulfide interchange p 96.6 0.004 1.4E-07 48.8 6.1 112 100-235 7-137 (147)
252 2c0g_A ERP29 homolog, windbeut 96.6 0.019 6.4E-07 49.1 10.7 93 108-235 33-130 (248)
253 1h75_A Glutaredoxin-like prote 96.5 0.0057 2E-07 42.0 5.8 33 112-152 3-35 (81)
254 2ht9_A Glutaredoxin-2; thiored 96.4 0.0064 2.2E-07 47.6 6.1 64 112-213 51-114 (146)
255 2hze_A Glutaredoxin-1; thiored 96.3 0.0061 2.1E-07 45.3 5.4 65 111-213 20-87 (114)
256 1kte_A Thioltransferase; redox 96.3 0.0084 2.9E-07 43.4 6.1 23 111-134 13-35 (105)
257 3c1r_A Glutaredoxin-1; oxidize 96.2 0.01 3.4E-07 44.5 6.2 64 112-213 27-94 (118)
258 1r7h_A NRDH-redoxin; thioredox 96.0 0.013 4.3E-07 39.4 5.3 33 112-152 3-35 (75)
259 2klx_A Glutaredoxin; thioredox 95.8 0.04 1.4E-06 38.5 7.5 32 112-151 8-39 (89)
260 3ic4_A Glutaredoxin (GRX-1); s 95.6 0.058 2E-06 37.8 7.8 32 112-151 14-45 (92)
261 2ec4_A FAS-associated factor 1 95.6 0.087 3E-06 42.5 9.6 125 81-235 29-166 (178)
262 2yan_A Glutaredoxin-3; oxidore 95.3 0.044 1.5E-06 39.8 6.4 27 119-152 30-56 (105)
263 1fov_A Glutaredoxin 3, GRX3; a 95.2 0.051 1.7E-06 37.0 6.4 32 112-151 3-34 (82)
264 1un2_A DSBA, thiol-disulfide i 95.2 0.0035 1.2E-07 51.6 0.1 42 107-151 113-157 (197)
265 3rhb_A ATGRXC5, glutaredoxin-C 95.1 0.037 1.3E-06 40.7 5.7 32 112-151 21-52 (113)
266 3l9s_A Thiol:disulfide interch 95.1 0.07 2.4E-06 43.3 7.9 41 107-150 21-64 (191)
267 3nzn_A Glutaredoxin; structura 94.8 0.054 1.9E-06 39.2 5.6 33 111-151 23-55 (103)
268 3h8q_A Thioredoxin reductase 3 94.6 0.082 2.8E-06 39.1 6.4 33 112-152 19-51 (114)
269 3ctg_A Glutaredoxin-2; reduced 94.6 0.075 2.6E-06 40.4 6.2 32 112-151 39-74 (129)
270 3msz_A Glutaredoxin 1; alpha-b 94.6 0.19 6.6E-06 34.5 8.0 33 112-152 6-38 (89)
271 3qmx_A Glutaredoxin A, glutare 93.7 0.081 2.8E-06 38.2 4.5 35 111-153 17-51 (99)
272 2axo_A Hypothetical protein AT 93.6 0.91 3.1E-05 39.0 11.7 38 111-151 44-81 (270)
273 3q6o_A Sulfhydryl oxidase 1; p 93.4 0.24 8.1E-06 41.3 7.8 39 171-215 184-222 (244)
274 3f4s_A Alpha-DSBA1, putative u 93.3 0.24 8.1E-06 41.4 7.5 42 106-149 38-81 (226)
275 3feu_A Putative lipoprotein; a 93.3 0.036 1.2E-06 44.7 2.3 39 107-150 22-60 (185)
276 3l9v_A Putative thiol-disulfid 93.2 0.032 1.1E-06 45.2 1.9 40 110-151 16-58 (189)
277 2khp_A Glutaredoxin; thioredox 91.7 0.18 6.2E-06 35.1 4.1 33 112-152 8-40 (92)
278 1wik_A Thioredoxin-like protei 90.8 0.47 1.6E-05 34.5 5.7 35 110-152 16-54 (109)
279 4f9z_D Endoplasmic reticulum r 90.7 2 6.9E-05 35.2 10.2 91 110-235 133-223 (227)
280 3ihg_A RDME; flavoenzyme, anth 90.1 3.1 0.00011 38.7 12.1 96 78-216 420-515 (535)
281 1pn0_A Phenol 2-monooxygenase; 89.0 4.2 0.00014 39.2 12.4 139 78-235 479-644 (665)
282 2dkh_A 3-hydroxybenzoate hydro 87.7 4.9 0.00017 38.5 11.8 141 78-233 467-634 (639)
283 3l78_A Regulatory protein SPX; 85.9 2.3 7.8E-05 31.5 6.7 63 115-191 4-70 (120)
284 3c7m_A Thiol:disulfide interch 85.0 1.1 3.9E-05 35.4 4.9 42 107-151 17-59 (195)
285 1z3e_A Regulatory protein SPX; 84.6 1.7 5.7E-05 32.8 5.5 65 112-191 3-71 (132)
286 3ktb_A Arsenical resistance op 84.4 3.9 0.00013 29.8 7.1 89 112-232 7-101 (106)
287 2ct6_A SH3 domain-binding glut 84.3 3.3 0.00011 30.0 6.9 45 112-158 10-54 (111)
288 1aba_A Glutaredoxin; electron 84.0 1.9 6.3E-05 29.6 5.1 31 113-151 3-37 (87)
289 3tdg_A DSBG, putative uncharac 83.7 1.1 3.8E-05 38.5 4.5 41 106-151 146-186 (273)
290 1t1v_A SH3BGRL3, SH3 domain-bi 83.7 3.3 0.00011 28.8 6.4 38 112-153 4-43 (93)
291 3kgk_A Arsenical resistance op 83.1 5.3 0.00018 29.4 7.3 90 112-233 4-99 (110)
292 2wci_A Glutaredoxin-4; redox-a 82.2 0.89 3.1E-05 34.7 3.0 34 110-151 36-73 (135)
293 3gx8_A Monothiol glutaredoxin- 81.3 4.9 0.00017 29.7 6.8 35 110-152 17-58 (121)
294 3fz4_A Putative arsenate reduc 80.6 3.4 0.00012 30.6 5.7 63 114-190 6-72 (120)
295 3gkx_A Putative ARSC family re 79.0 3.2 0.00011 30.8 5.1 62 115-190 8-73 (120)
296 3rdw_A Putative arsenate reduc 78.2 5.4 0.00019 29.5 6.2 64 114-191 8-76 (121)
297 3l4n_A Monothiol glutaredoxin- 78.0 1.1 3.8E-05 33.8 2.3 21 112-133 16-36 (127)
298 3zyw_A Glutaredoxin-3; metal b 77.8 2.8 9.6E-05 30.5 4.4 27 119-152 29-55 (111)
299 3ipz_A Monothiol glutaredoxin- 77.4 2.7 9.1E-05 30.4 4.2 25 120-151 32-56 (109)
300 1u6t_A SH3 domain-binding glut 76.2 5 0.00017 30.0 5.4 44 118-162 7-50 (121)
301 3bci_A Disulfide bond protein 76.1 3.4 0.00012 32.4 4.9 41 107-149 11-53 (186)
302 3gn3_A Putative protein-disulf 75.0 2.3 8E-05 33.9 3.6 41 107-149 14-54 (182)
303 2wem_A Glutaredoxin-related pr 74.4 5.3 0.00018 29.5 5.2 26 120-152 34-60 (118)
304 3t58_A Sulfhydryl oxidase 1; o 74.3 6.7 0.00023 36.7 7.0 39 171-215 184-222 (519)
305 3fhk_A UPF0403 protein YPHP; d 74.1 27 0.00093 26.6 10.3 37 198-235 106-142 (147)
306 1s3c_A Arsenate reductase; ARS 73.6 4 0.00014 31.2 4.5 63 115-191 6-72 (141)
307 1rw1_A Conserved hypothetical 70.6 2.8 9.7E-05 30.6 2.9 41 116-163 5-49 (114)
308 3gha_A Disulfide bond formatio 69.4 5.6 0.00019 32.0 4.7 43 106-150 28-72 (202)
309 3f0i_A Arsenate reductase; str 68.7 8.1 0.00028 28.5 5.1 65 114-192 7-76 (119)
310 2kok_A Arsenate reductase; bru 68.5 3.4 0.00011 30.5 2.9 59 116-190 10-72 (120)
311 3gmf_A Protein-disulfide isome 67.0 12 0.0004 30.3 6.2 48 101-150 9-58 (205)
312 1sji_A Calsequestrin 2, calseq 63.7 41 0.0014 29.0 9.6 93 110-236 247-345 (350)
313 1nm3_A Protein HI0572; hybrid, 61.5 11 0.00038 30.8 5.1 33 111-151 171-203 (241)
314 2wul_A Glutaredoxin related pr 58.1 17 0.00059 26.8 5.1 45 110-162 21-70 (118)
315 3bj5_A Protein disulfide-isome 54.8 34 0.0012 25.8 6.6 63 183-252 79-145 (147)
316 3us3_A Calsequestrin-1; calciu 52.7 76 0.0026 27.6 9.4 97 110-236 249-347 (367)
317 1xhj_A Nitrogen fixation prote 51.8 23 0.00077 24.8 4.5 34 96-132 26-59 (88)
318 2jvx_A NF-kappa-B essential mo 49.8 1.5 5.2E-05 24.0 -1.5 20 121-140 6-25 (28)
319 3ghf_A Septum site-determining 47.7 44 0.0015 24.6 5.9 51 105-163 45-95 (120)
320 2in3_A Hypothetical protein; D 39.9 54 0.0019 25.8 5.9 36 111-148 9-44 (216)
321 2g2q_A Glutaredoxin-2; thiored 39.9 3.1 0.00011 30.9 -1.6 104 110-235 3-114 (124)
322 2l4c_A Endoplasmic reticulum r 39.5 41 0.0014 24.7 4.7 27 108-138 39-65 (124)
323 3ga8_A HTH-type transcriptiona 39.0 19 0.00066 24.2 2.5 36 104-140 23-64 (78)
324 2in3_A Hypothetical protein; D 36.9 49 0.0017 26.1 5.1 34 198-236 176-209 (216)
325 2v2f_A Penicillin binding prot 35.5 19 0.00064 18.7 1.6 15 201-215 6-20 (26)
326 2x8g_A Thioredoxin glutathione 34.0 23 0.00078 33.2 3.0 32 112-151 20-51 (598)
327 2r2j_A Thioredoxin domain-cont 33.6 76 0.0026 27.7 6.3 25 182-211 281-305 (382)
328 2l3i_A Aoxki4A, antimicrobial 33.3 16 0.00055 19.3 1.0 10 243-252 1-10 (30)
329 3sti_A Protease DEGQ; serine p 32.7 34 0.0012 28.4 3.5 45 204-253 191-244 (245)
330 3feu_A Putative lipoprotein; a 32.3 58 0.002 25.3 4.8 41 182-235 142-182 (185)
331 2c21_A Trypanothione-dependent 30.0 1.4E+02 0.005 21.2 6.5 49 141-215 76-125 (144)
332 3l7t_A SMU.1112C, putative unc 29.8 1.3E+02 0.0046 20.5 7.1 53 141-214 80-132 (134)
333 4f9z_D Endoplasmic reticulum r 29.6 1.2E+02 0.004 24.2 6.3 47 180-233 62-108 (227)
334 2k9k_A TONB2; metal transport; 29.4 70 0.0024 22.4 4.4 46 184-234 32-78 (106)
335 3j21_Z 50S ribosomal protein L 28.4 1.5E+02 0.0051 20.5 6.5 57 132-191 21-77 (99)
336 1w63_Q Adapter-related protein 27.9 80 0.0027 24.2 4.7 19 200-218 3-21 (158)
337 3v67_A Sensor protein CPXA; PA 27.8 48 0.0016 25.1 3.3 36 199-241 55-90 (138)
338 3bci_A Disulfide bond protein 27.7 29 0.00099 26.8 2.2 39 182-236 139-177 (186)
339 2r47_A Uncharacterized protein 27.6 72 0.0025 24.7 4.3 60 111-180 87-146 (157)
340 3kol_A Oxidoreductase, glyoxal 27.3 1.4E+02 0.0046 21.3 5.9 18 201-218 135-152 (156)
341 2p25_A Glyoxalase family prote 27.2 1.5E+02 0.005 20.1 6.2 53 141-214 72-124 (126)
342 1w41_A 50S ribosomal protein L 26.9 1.6E+02 0.0055 20.4 6.4 57 132-191 22-78 (101)
343 3kzq_A Putative uncharacterize 26.9 98 0.0034 24.3 5.3 36 111-148 4-39 (208)
344 2a4x_A Mitomycin-binding prote 26.3 90 0.0031 22.2 4.7 59 141-217 70-128 (138)
345 3cwf_A Alkaline phosphatase sy 26.1 36 0.0012 24.4 2.3 15 201-215 50-64 (122)
346 4g6x_A Glyoxalase/bleomycin re 26.0 1.5E+02 0.005 21.7 5.9 54 140-215 96-149 (155)
347 2pr7_A Haloacid dehalogenase/e 25.8 1.3E+02 0.0043 21.0 5.4 39 125-163 17-55 (137)
348 1veh_A NIFU-like protein hirip 25.3 35 0.0012 24.0 2.0 34 96-132 33-66 (92)
349 4hde_A SCO1/SENC family lipopr 25.2 21 0.00071 27.5 0.9 25 113-137 40-64 (170)
350 3bqa_A Sensor protein PHOQ; hi 25.1 30 0.001 26.4 1.7 25 201-232 43-67 (148)
351 1ahl_A Anthopleurin-A, AP-A; n 24.8 27 0.00092 21.5 1.1 11 244-254 27-37 (49)
352 3sk2_A EHPR; antibiotic resist 24.7 1.4E+02 0.0047 21.0 5.4 58 142-215 72-129 (132)
353 4gym_A Glyoxalase/bleomycin re 24.7 1E+02 0.0036 22.3 4.8 55 144-217 79-133 (149)
354 3kzq_A Putative uncharacterize 24.5 87 0.003 24.6 4.6 34 198-236 169-202 (208)
355 2rk9_A Glyoxalase/bleomycin re 23.4 1.5E+02 0.0052 21.1 5.5 61 141-216 73-134 (145)
356 3mjh_B Early endosome antigen 23.2 7.2 0.00025 22.3 -1.6 18 121-138 8-25 (34)
357 3e5d_A Putative glyoxalase I; 22.7 1.9E+02 0.0063 19.7 6.4 57 141-215 70-126 (127)
358 1th5_A NIFU1; iron-sulfur clus 22.5 58 0.002 21.8 2.6 39 95-136 22-61 (74)
359 3gha_A Disulfide bond formatio 22.4 80 0.0027 25.0 3.9 38 182-235 153-190 (202)
360 1u07_A TONB protein; beta-hair 21.5 1.1E+02 0.0036 20.7 3.9 30 183-217 16-45 (90)
361 3cpq_A 50S ribosomal protein L 21.4 2.2E+02 0.0076 20.1 6.6 57 132-191 27-83 (110)
362 3hdp_A Glyoxalase-I; glutathio 20.9 84 0.0029 22.0 3.5 55 141-214 76-130 (133)
363 3r4q_A Lactoylglutathione lyas 20.6 1.5E+02 0.0051 21.8 5.0 58 142-218 76-133 (160)
364 2vgl_S AP-2 complex subunit si 20.5 1.5E+02 0.005 22.0 4.9 19 200-218 3-21 (142)
365 2za0_A Glyoxalase I; lyase, la 20.4 2.7E+02 0.0093 20.7 7.3 53 141-215 123-175 (184)
366 2h9x_A Toxin CGNA; beta sheet; 20.4 33 0.0011 21.0 0.8 11 244-254 25-35 (47)
367 3sl7_A CBS domain-containing p 20.2 2.2E+02 0.0075 21.0 6.0 31 198-236 128-158 (180)
No 1
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-46 Score=319.26 Aligned_cols=195 Identities=51% Similarity=0.858 Sum_probs=185.0
Q ss_pred cCcCCCCCCCCCCeEEeeecCCCceeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCH
Q 024201 74 VEIPPLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSV 153 (271)
Q Consensus 74 ~~~~~~~G~~~Pdf~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~ 153 (271)
..|.+++|+++|||+++.+.|.+|++|+|+||+|| ++||+|||++|||+|..|++.|++.+++|+++|++||+||+|+.
T Consensus 19 ~~M~~~VG~~APdF~l~a~~d~~~~~vsLsd~~GK-~vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~~g~~vigiS~Ds~ 97 (216)
T 3sbc_A 19 SHMVAQVQKQAPTFKKTAVVDGVFDEVSLDKYKGK-YVVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQGAQVLFASTDSE 97 (216)
T ss_dssp ---CCCTTSBCCCCCEEEEETTEEEEECGGGGTTS-EEEEEECSCTTSSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCH
T ss_pred CcchhhcCCcCCCCCCcceECCCCcEEehHHhCCC-eEEEEEEcCCCCCcCchhhhHHHHhHHhhccCCceEEEeecCch
Confidence 34568899999999999888899999999999998 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhcCCCCCcccceEEcCChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHH
Q 024201 154 FSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQ 233 (271)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~ 233 (271)
+.+.+|.+.+...+++.+++||+++|.+++++++||+..++.|+..|.+||||++|+|++..+++...+++++|+|+.|+
T Consensus 98 ~sh~aw~~~~~~~~~~~~l~fpllsD~~~~vak~YGv~~~~~g~~~R~tFiID~~G~Ir~~~v~~~~~grn~dEiLr~l~ 177 (216)
T 3sbc_A 98 YSLLAWTNIPRKEGGLGPINIPLLADTNHSLSRDYGVLIEEEGVALRGLFIIDPKGVIRHITINDLPVGRNVDEALRLVE 177 (216)
T ss_dssp HHHHHHHTSCGGGTCCCSCSSCEEECTTSHHHHHHTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHH
T ss_pred hhHHHHHHHHHHhCCccCcccceEeCCCCHHHHHcCCeeccCCceeeEEEEECCCCeEEEEEEcCCCCCCCHHHHHHHHH
Confidence 99999999988888888899999999999999999999888899999999999999999999999999999999999999
Q ss_pred HHHHhhhCCCcccCCCCCCCCCCCCCCchhhHHHhhh
Q 024201 234 ALQYVQENPDEVCPAGWKPGDKSMKPDPKLSKEYFAA 270 (271)
Q Consensus 234 ~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 270 (271)
+||+..++ ++.||++|+||+++|+|+....|+||.+
T Consensus 178 AlQ~~~~~-~~~~Pa~W~~G~~~i~p~~~~~~~~~~~ 213 (216)
T 3sbc_A 178 AFQWTDKN-GTVLPCNWTPGAATIKPTVEDSKEYFEA 213 (216)
T ss_dssp HHHHHHHH-CCBBCTTCCTTSCCBCCSTTTHHHHHHH
T ss_pred HhhhHhhc-CCCcCCCCCCCCceecCCHHHHHHHHHH
Confidence 99999999 8999999999999999999999999975
No 2
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=100.00 E-value=5.4e-45 Score=310.01 Aligned_cols=190 Identities=53% Similarity=0.982 Sum_probs=154.8
Q ss_pred CCCCCCCCCeEEeee-cCCCceeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHH
Q 024201 78 PLVGNTAPDFAAEAV-FDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSH 156 (271)
Q Consensus 78 ~~~G~~~Pdf~l~~~-~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~ 156 (271)
+++|++||||++.++ .|.+|+.|+|+||+|| ++||+|||.+|||+|..|+..|++++++|++.|++||+||+|+.+.+
T Consensus 26 ~~vG~~APdF~~~a~l~d~~g~~vsLsd~~GK-~vVL~FyP~d~TpvCt~E~~~f~~~~~eF~~~g~~vigiS~Ds~~sh 104 (219)
T 3tue_A 26 AKINSPAPSFEEVALMPNGSFKKISLSSYKGK-WVVLFFYPLDFTFVCPTEVIAFSDSVSRFNELNCEVLACSIDSEYAH 104 (219)
T ss_dssp CCTTSBCCCCEEEEECTTSCEEEEEGGGGTTS-EEEEEECSCTTCSSCCHHHHHHHTTHHHHHTTTEEEEEEESSCHHHH
T ss_pred cccCCcCCCCcccccccCCCCcEEehHHhCCC-EEEEEEecccCCCCCchhHhhHHHHHhhhccCCcEEEEeeCCchhhH
Confidence 679999999998754 3788999999999998 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhcCCCCCcccceEEcCChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHHH
Q 024201 157 LAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQ 236 (271)
Q Consensus 157 ~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l~ 236 (271)
++|.+++...++..+++||+++|.+++++++||+.....|+..+.+||||++|+|++.++++..++++++|+|+.|++||
T Consensus 105 ~~w~~~~~~~~~~~~l~fpllsD~~~~va~~yGv~~~~~g~~~R~tFiIDp~g~Ir~~~~~~~~~gr~~~EvLr~l~aLQ 184 (219)
T 3tue_A 105 LQWTLQDRKKGGLGTMAIPILADKTKNIARSYGVLEESQGVAYRGLFIIDPHGMLRQITVNDMPVGRSVEEVLRLLEAFQ 184 (219)
T ss_dssp HHHHHSCGGGTCCCSCSSCEEECTTSHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred HHHhhhhHHhcCccccccccccCcccHHHHHcCCcccCCCeeEEEEEEECCCCeEEEEEEecCCCCCCHHHHHHHHHHhh
Confidence 99999887777777899999999999999999999888898899999999999999999999999999999999999999
Q ss_pred HhhhCCCcccCCCCCCCCCCCCCCchhhHH-Hhh
Q 024201 237 YVQENPDEVCPAGWKPGDKSMKPDPKLSKE-YFA 269 (271)
Q Consensus 237 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~-~~~ 269 (271)
+.+++ +++||++|+||+++|+|++..+++ ||.
T Consensus 185 ~~~~~-~~~~Pa~W~~G~~~i~p~~~~~~e~y~~ 217 (219)
T 3tue_A 185 FVEKH-GEVCPANWKKGDPGMKPEPNASVEGYFS 217 (219)
T ss_dssp HHHHC-----------------------------
T ss_pred hHHhc-CCCcCCCCCCCCccccCCCccchhhhcc
Confidence 99999 899999999999999999988876 996
No 3
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=100.00 E-value=2.5e-42 Score=301.63 Aligned_cols=191 Identities=54% Similarity=1.015 Sum_probs=154.6
Q ss_pred CCCCCCCCCeEEeeecCCCceeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHH
Q 024201 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHL 157 (271)
Q Consensus 78 ~~~G~~~Pdf~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~ 157 (271)
+.+|+++|+|+++++.+.+|+.++|++|+|| ++||+||+++|||+|+.+++.|++++++|+++|++||+||+|+.+.+.
T Consensus 62 l~vG~~aPdF~l~~l~d~~G~~vsLsd~kGK-~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~gv~vv~IS~D~~~~~~ 140 (254)
T 3tjj_A 62 AKISKPAPYWEGTAVIDGEFKELKLTDYRGK-YLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHL 140 (254)
T ss_dssp CCTTSBCCCCEEEEEETTEEEEEEGGGGTTS-EEEEEECSCTTCSSCCHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHH
T ss_pred cCCCCCCCCcEeeeecCCCCcEEeHHHHCCC-eEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEcCCCHHHHH
Confidence 8899999999999877888999999999998 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcCCCCCcccceEEcCChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHHHH
Q 024201 158 AWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQY 237 (271)
Q Consensus 158 ~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l~~ 237 (271)
+|++.+.+.+++.+++|+++.|.++++++.||+.....|+..|++||||++|+|+++++++...+++++++++.|+++|+
T Consensus 141 ~~~~~~~~~~g~~~~~fp~l~D~~~~va~~ygv~~~~~g~~~p~tflID~~G~I~~~~~~~~~~~~~~~eil~~L~alq~ 220 (254)
T 3tjj_A 141 AWINTPRRQGGLGPIRIPLLSDLTHQISKDYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAFQY 220 (254)
T ss_dssp HHHTSCGGGTSCCSCSSCEEECTTSHHHHHHTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCcccccceeeCcHHHHHHHcCCccccCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHhhcc
Confidence 99999887777767899999999999999999987777777899999999999999999888889999999999999999
Q ss_pred hhhCCCcccCCCCCCCCCCCCCCchhhHHHhhh
Q 024201 238 VQENPDEVCPAGWKPGDKSMKPDPKLSKEYFAA 270 (271)
Q Consensus 238 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 270 (271)
..++ +++||++|+||+++|+|++.++++||..
T Consensus 221 ~~~~-~~~cp~~W~~g~~~~~~~~~~~~~~~~~ 252 (254)
T 3tjj_A 221 TDKH-GEVAPAGWKPGSETIIPDPAGKLKYFDK 252 (254)
T ss_dssp HHHH-C---------------------------
T ss_pred cccc-CccccCCCCCCCceeccChhHHHHHhhc
Confidence 9888 8999999999999999999999999974
No 4
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=100.00 E-value=1.8e-41 Score=293.93 Aligned_cols=191 Identities=57% Similarity=1.040 Sum_probs=179.4
Q ss_pred CCCCCCCCCeEEeeecCCCceeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHH
Q 024201 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHL 157 (271)
Q Consensus 78 ~~~G~~~Pdf~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~ 157 (271)
+.+|+++|+|+++++.+.+|++++|++|+|| ++||+||+++|||+|+.+++.|++++++|+++|++||+||+|+.+.++
T Consensus 48 l~vG~~aPdF~l~~~~d~~G~~vsLsd~~Gk-~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~gv~vv~Is~D~~~~~~ 126 (240)
T 3qpm_A 48 AKISKPAPQWEGTAVINGEFKELKLSDYRGK-YLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAINTEVVACSVDSQFTHL 126 (240)
T ss_dssp CCTTSBCCCCEEEEEETTEEEEEEGGGGTTS-EEEEEECSCTTSSHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHHH
T ss_pred CCCCCCCCCcEeeeeeCCCCcEEEHHHhCCC-EEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHH
Confidence 7899999999999877888999999999998 999999977999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcCCCCCcccceEEcCChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHHHH
Q 024201 158 AWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQY 237 (271)
Q Consensus 158 ~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l~~ 237 (271)
+|.+.+.+.+++.+++|+++.|.++++++.||+.....|+..|++||||++|+|++++.++...+++++++++.|+++|+
T Consensus 127 ~~~~~~~~~~~~~~~~fp~l~D~~~~v~~~ygv~~~~~g~~~p~~flID~~G~I~~~~~~~~~~~~~~~eil~~l~~lq~ 206 (240)
T 3qpm_A 127 AWIITPRKQGGLGPMKIPLLSDLTHQISKDYGVYLEDQGHTLRGLFIIDEKGVLRQITMNDLPVGRSVDETLRLVQAFQY 206 (240)
T ss_dssp HHHHSCGGGTCCCSCSSCEEECTTSHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhhcCCCCCceeEEeCchHHHHHHhCCccccCCCccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHhhh
Confidence 99999877777667899999999999999999987777778999999999999999998888888999999999999999
Q ss_pred hhhCCCcccCCCCCCCCCCCCCCchhhHHHhhh
Q 024201 238 VQENPDEVCPAGWKPGDKSMKPDPKLSKEYFAA 270 (271)
Q Consensus 238 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 270 (271)
..++ +++||++|+||++++.|++.+.++||..
T Consensus 207 ~~~~-~~~cp~~W~~g~~~~~~~~~~~~~~~~~ 238 (240)
T 3qpm_A 207 TDKH-GEVCPAGWKPGSDTIIPDPSGKLKYFDK 238 (240)
T ss_dssp HHHH-SCBBCTTCCTTSCCBCSSTTTTHHHHC-
T ss_pred hhhc-CCccCCCCCCCCceecCCHHHHHHHHhh
Confidence 9988 8999999999999999999999999974
No 5
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=100.00 E-value=6.1e-40 Score=278.94 Aligned_cols=191 Identities=54% Similarity=1.022 Sum_probs=173.5
Q ss_pred CCCCCCCCCeEEeeecCCCceeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHH
Q 024201 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHL 157 (271)
Q Consensus 78 ~~~G~~~Pdf~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~ 157 (271)
+.+|+++|+|++.++.+.+|+.++|++++|| ++||+||+++|||+|+.+++.|++++++|+++|++||+||+|+++.++
T Consensus 19 ~~~G~~aP~f~l~~~~~~~g~~v~l~d~~Gk-~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~ 97 (211)
T 2pn8_A 19 YFQSMPAPYWEGTAVIDGEFKELKLTDYRGK-YLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHL 97 (211)
T ss_dssp CCSSCBCCCCEEEEEETTEEEEEEGGGGTTS-EEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHH
T ss_pred CCCCCcCCCeEeecccCCCCcEEEHHHhCCC-eEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHH
Confidence 7899999999999654567899999999998 899999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcCCCCCcccceEEcCChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHHHH
Q 024201 158 AWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQY 237 (271)
Q Consensus 158 ~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l~~ 237 (271)
+|.+.+.+..++.+++|+++.|.++++++.||+.....|..+|++||||++|+|++.+.+....+++.+++++.|++|+.
T Consensus 98 ~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ygv~~~~~g~~~p~~~lID~~G~I~~~~~g~~~~~~~~~ell~~l~~l~~ 177 (211)
T 2pn8_A 98 AWINTPRRQGGLGPIRIPLLSDLTHQISKDYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAFQY 177 (211)
T ss_dssp HHHTSCGGGTCCCSCSSCEEECTTSHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHHH
T ss_pred HHHHHhhhccCccCCceEEEECCchHHHHHcCCcccCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHhhh
Confidence 99998766555556899999999999999999976555657999999999999999998877777899999999999998
Q ss_pred hhhCCCcccCCCCCCCCCCCCCCchhhHHHhhh
Q 024201 238 VQENPDEVCPAGWKPGDKSMKPDPKLSKEYFAA 270 (271)
Q Consensus 238 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 270 (271)
.+++ +++||++|++|+++|.+.+++-++||+.
T Consensus 178 ~~~~-~~~~p~~w~~g~~~~~~~~~~~~~~~~~ 209 (211)
T 2pn8_A 178 TDKH-GEVCPAGWKPGSETIIPDPAGKLKYFDK 209 (211)
T ss_dssp HHHH-CCBBCTTCCTTSCCBCSSTTTHHHHHCC
T ss_pred cccC-CcccCCCCCCCCccccCCchhHHHHhhh
Confidence 7766 8999999999999999999999999974
No 6
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=100.00 E-value=1.8e-39 Score=277.61 Aligned_cols=196 Identities=54% Similarity=0.977 Sum_probs=150.6
Q ss_pred cccCcCCCCCCCCCCeEEeeecCCCceeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCC
Q 024201 72 ASVEIPPLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTD 151 (271)
Q Consensus 72 ~~~~~~~~~G~~~Pdf~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d 151 (271)
+.+.+ +.+|+++|+|+++++.+.+|+.++|++++|| ++||+||+++|||+|+.+++.|.+++++|+++|++||+|++|
T Consensus 22 ~~~~~-l~~G~~aP~f~l~~~~~~~g~~v~l~d~~Gk-~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~Is~D 99 (220)
T 1zye_A 22 LEDPA-PAVTQHAPYFKGTAVVSGEFKEISLDDFKGK-YLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVD 99 (220)
T ss_dssp ------CCTTSBCCCCEEEEECSSSEEEEEGGGGTTS-EEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEEEEESS
T ss_pred ccCCc-ccCCCCCCCcEEEeeeCCCCcEEEHHHhCCC-eEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECC
Confidence 34444 7899999999999877888999999999997 999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHH
Q 024201 152 SVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRT 231 (271)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~ 231 (271)
+.+.+++|.+.+.+..++.+++|+++.|.+.++++.||+.....|..+|++||||++|+|++...+....+++.+++++.
T Consensus 100 ~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~i~~~ygv~~~~~g~~~P~~~liD~~G~I~~~~~g~~~~~~~~~ell~~ 179 (220)
T 1zye_A 100 SHFSHLAWINTPRKNGGLGHMNIALLSDLTKQISRDYGVLLEGPGLALRGLFIIDPNGVIKHLSVNDLPVGRSVEETLRL 179 (220)
T ss_dssp CHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCcCCceEEEECCcHHHHHHhCCeecCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHH
Confidence 99999999998877766667899999999999999999987777778999999999999999998887778899999999
Q ss_pred HHHHHHhhhCCCcccCCCCCCCCCCCCCCchhhHHHhhh
Q 024201 232 LQALQYVQENPDEVCPAGWKPGDKSMKPDPKLSKEYFAA 270 (271)
Q Consensus 232 l~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 270 (271)
|++|+..+++ +++||++|++|++++.+.+...++||..
T Consensus 180 l~~l~~~~~~-~~~cp~~W~~g~~~~~~~~~~~~~~~~~ 217 (220)
T 1zye_A 180 VKAFQFVEAH-GEVSPANWTPESPTIKPHPTASREYFEK 217 (220)
T ss_dssp HHHHHHTTC------------------------------
T ss_pred HHHhhhhccc-CCccCCCCCCCCceecCCHHHHHHHHHh
Confidence 9999987655 9999999999999999999999999975
No 7
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=100.00 E-value=4.8e-39 Score=270.97 Aligned_cols=192 Identities=54% Similarity=0.992 Sum_probs=175.1
Q ss_pred CCCCCCCCCeEEeeec-CCCceeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHH
Q 024201 78 PLVGNTAPDFAAEAVF-DQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSH 156 (271)
Q Consensus 78 ~~~G~~~Pdf~l~~~~-~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~ 156 (271)
+.+|+++|+|++.++. +.+|+.++|++++|| ++||+||+++|||+|+.+++.|.+++++|+++|++||+|++|+.+.+
T Consensus 6 ~~~G~~aP~f~l~~~~~~g~~~~v~l~~~~gk-~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~vi~Is~D~~~~~ 84 (202)
T 1uul_A 6 AEDLHPAPDFNETALMPNGTFKKVALTSYKGK-WLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACSMDSEYSH 84 (202)
T ss_dssp CCTTSBCCCCEEEEECTTSCEEEEEGGGGTTS-EEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHH
T ss_pred ccCCCcCCCcEeeeeecCCCccEEEHHHhCCC-eEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHH
Confidence 7799999999999663 334489999999998 99999999999999999999999999999998999999999999999
Q ss_pred HHHHHHhhhcCCCCCcccceEEcCChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHHH
Q 024201 157 LAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQ 236 (271)
Q Consensus 157 ~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l~ 236 (271)
++|.+.+.+..++.+++|+++.|.+.++++.||+.....|..+|++||||++|+|++.+.+....+++.+++++.|++++
T Consensus 85 ~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ygv~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~ell~~l~~l~ 164 (202)
T 1uul_A 85 LAWTSIERKRGGLGQMNIPILADKTKCIMKSYGVLKEEDGVAYRGLFIIDPKQNLRQITVNDLPVGRDVDEALRLVKAFQ 164 (202)
T ss_dssp HHHHHSCGGGTCCCSCSSCEEECTTCHHHHHHTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCCCCCCceeEEECCchHHHHHcCCccCCCCceeeEEEEECCCCEEEEEEeCCCCCCCCHHHHHHHHHHhh
Confidence 99999887766666789999999999999999998777777899999999999999998888777889999999999999
Q ss_pred HhhhCCCcccCCCCCCCCCCCCCCchhhHHHhhhC
Q 024201 237 YVQENPDEVCPAGWKPGDKSMKPDPKLSKEYFAAI 271 (271)
Q Consensus 237 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 271 (271)
..+++ +++||++|++|++++.+++.+.++||+.+
T Consensus 165 ~~~~~-~~~~p~~w~~g~~~~~~~~~~~~~~~~~~ 198 (202)
T 1uul_A 165 FVEKH-GEVCPANWKPGDKTMKPDPEKSKEYFGAV 198 (202)
T ss_dssp HHHHH-SCBBCTTCCTTSCCBCSSTGGGHHHHCC-
T ss_pred hhhhc-CCccCCCcCCCCceeccChhhHHHHHhhh
Confidence 88777 89999999999999999999999999753
No 8
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=100.00 E-value=2.9e-39 Score=275.12 Aligned_cols=189 Identities=49% Similarity=0.865 Sum_probs=172.7
Q ss_pred CCCCCCCCCeEEeeecCCCc--eeEecccc-cCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHH
Q 024201 78 PLVGNTAPDFAAEAVFDQEF--INVKLSDY-IGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVF 154 (271)
Q Consensus 78 ~~~G~~~Pdf~l~~~~~~~g--~~v~Lsd~-~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~ 154 (271)
+.+|+++|+|++.++. .+| +.++|+++ +|| ++||+||+++|||+|+.+++.|++++++|+++|++||+||+|+.+
T Consensus 21 l~~G~~aP~f~l~~~~-~~G~~~~v~l~d~~~gk-~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~ 98 (213)
T 2i81_A 21 TYVGKEAPFFKAEAVF-GDNSFGEVNLTQFIGKK-YVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCSVDSKY 98 (213)
T ss_dssp CCBTSBCCCCEEEEEC-TTSCEEEEEGGGGTTTC-EEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHH
T ss_pred ccCCCcCCCeEeeccc-cCCceeEEeHHHHcCCC-eEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHH
Confidence 7899999999998541 156 79999999 998 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcCCCCCcccceEEcCChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHH
Q 024201 155 SHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQA 234 (271)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~ 234 (271)
.+++|.+.+.+.+++.+++|+++.|.+.++++.||+.. +.|+.+|++||||++|+|++...+....+++.+++++.|++
T Consensus 99 ~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ygv~~-~~g~~~p~~~lID~~G~i~~~~~~~~~~~~~~~ell~~l~~ 177 (213)
T 2i81_A 99 THLAWKKTPLAKGGIGNIKHTLLSDITKSISKDYNVLF-DDSVSLRAFVLIDMNGIVQHLLVNNLAIGRSVDEILRIIDA 177 (213)
T ss_dssp HHHHHHSSCGGGTCCCSCSSEEEECTTSHHHHHTTCEE-TTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCccCCCceEEECCchHHHHHhCCcc-ccCCcccEEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHH
Confidence 99999998877666667899999999999999999986 55667999999999999999988877777899999999999
Q ss_pred HHHhhhCCCcccCCCCCCCCCCCCCCchhhHHHhhh
Q 024201 235 LQYVQENPDEVCPAGWKPGDKSMKPDPKLSKEYFAA 270 (271)
Q Consensus 235 l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 270 (271)
++..+++ +++||++|++|++++.+++++.++||..
T Consensus 178 l~~~~~~-~~~cp~~w~~g~~~~~~~~~~~~~~~~~ 212 (213)
T 2i81_A 178 IQHHEKY-GDVCPANWQKGKVSMKPSEEGVAQYLST 212 (213)
T ss_dssp HHHHHHH-CCBCCTTCCTTSCCBCSSTTTHHHHTTC
T ss_pred HHhhhhc-CCCcCCCCCcCCccccCCchhHHHHhhc
Confidence 9987776 8999999999999999999999999985
No 9
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=100.00 E-value=3.6e-38 Score=264.50 Aligned_cols=191 Identities=62% Similarity=1.077 Sum_probs=173.3
Q ss_pred CCCCCCCCCeEEeeecCCCceeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHH
Q 024201 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHL 157 (271)
Q Consensus 78 ~~~G~~~Pdf~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~ 157 (271)
+.+|+++|+|++.++.+.+|+.++|++++|| ++||+||+++||++|+.+++.|.+++++|+++|++||+|++|+.+...
T Consensus 5 l~~G~~aP~f~l~~~~~g~~~~v~l~~~~gk-~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~ 83 (197)
T 1qmv_A 5 ARIGKPAPDFKATAVVDGAFKEVKLSDYKGK-YVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVLGVSVDSQFTHL 83 (197)
T ss_dssp BCTTSBCCCCEEEEEETTEEEEEEGGGGTTS-EEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHH
T ss_pred ccCCCCCCCeEeEeecCCCccEEEHHHHCCC-eEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHH
Confidence 6799999999998653333489999999998 899999999999999999999999999999889999999999999999
Q ss_pred HHHHHhhhcCCCCCcccceEEcCChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHHHH
Q 024201 158 AWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQY 237 (271)
Q Consensus 158 ~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l~~ 237 (271)
+|++.+.+..++.+++|+++.|.+.++++.||+.....|..+|++||||++|+|++.+.+....+++.+++++.|++++.
T Consensus 84 ~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~~gv~~~~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~~e~l~~l~~l~~ 163 (197)
T 1qmv_A 84 AWINTPRKEGGLGPLNIPLLADVTRRLSEDYGVLKTDEGIAYRGLFIIDGKGVLRQITVNDLPVGRSVDEALRLVQAFQY 163 (197)
T ss_dssp HHHTSCGGGTCCCSCSSCEEECTTCHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhhCCCCCCceEEEECCcHHHHHHcCCccCCCCceeeEEEEECCCCcEEEEEeCCCCCCCCHHHHHHHHHhcch
Confidence 99999877766667899999999999999999986666767999999999999999998877778899999999999998
Q ss_pred hhhCCCcccCCCCCCCCCCCCCCchhhHHHhhh
Q 024201 238 VQENPDEVCPAGWKPGDKSMKPDPKLSKEYFAA 270 (271)
Q Consensus 238 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 270 (271)
.+++ +++||++|++|+++|.+.+...++||+.
T Consensus 164 ~~~~-~~~cp~~w~~g~~~~~~~~~~~~~~~~~ 195 (197)
T 1qmv_A 164 TDEH-GEVCPAGWKPGSDTIKPNVDDSKEYFSK 195 (197)
T ss_dssp HHHH-CCBBCTTCCTTSCCBCSSHHHHHHHHHH
T ss_pred hhcc-CCccCCCcCcCCccccCCccchhhHhhc
Confidence 8654 8999999999999999999999999974
No 10
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=100.00 E-value=1.4e-38 Score=272.41 Aligned_cols=189 Identities=48% Similarity=0.873 Sum_probs=147.4
Q ss_pred CCCCCCCCCeEEeeecCCCc--eeEecccc-cCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHH
Q 024201 78 PLVGNTAPDFAAEAVFDQEF--INVKLSDY-IGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVF 154 (271)
Q Consensus 78 ~~~G~~~Pdf~l~~~~~~~g--~~v~Lsd~-~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~ 154 (271)
+.+|+++|+|++.++. .+| +.++|+++ +|| ++||+||+++|||+|+.+++.|++++++|+++|++||+||+|+.+
T Consensus 25 l~~G~~aP~F~l~~~~-~~G~~~~v~L~d~~~Gk-~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~~v~vv~Is~D~~~ 102 (221)
T 2c0d_A 25 SLVTKKAYNFTAQGLN-KNNEIINVDLSSFIGQK-YCCLLFYPLNYTFVCPTEIIEFNKHIKDFENKNVELLGISVDSVY 102 (221)
T ss_dssp -CTTSBCCCCEEEEEC-TTSCEEEEEGGGGTTTC-EEEEEECCCCTTTCCHHHHHHHHHTHHHHHHTTEEEEEEESSCHH
T ss_pred CCCCCCCCCeEEeccc-cCCCccEEeHHHHcCCC-eEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEeCCCHH
Confidence 6799999999998441 167 89999999 998 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcCCCCCcccceEEcCChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHH
Q 024201 155 SHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQA 234 (271)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~ 234 (271)
.+++|.+.+.+..++.+++|+++.|.++++++.||+. ...|..+|++||||++|+|++.+.++...+.+.+++++.|++
T Consensus 103 ~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ygv~-~~~g~~~P~~~lID~~G~I~~~~~g~~~~~~~~~ell~~l~~ 181 (221)
T 2c0d_A 103 SHLAWKNMPIEKGGIGNVEFTLVSDINKDISKNYNVL-YDNSFALRGLFIIDKNGCVRHQTVNDLPIGRNVQEVLRTIDS 181 (221)
T ss_dssp HHHHHHHSCGGGTCCCSCSSEEEECTTSHHHHHTTCE-ETTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHH
T ss_pred HHHHHHHHhhhhcCccCCceEEEECCchHHHHHcCCc-ccCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHH
Confidence 9999999876555555678999999999999999996 444557899999999999999988876667889999999999
Q ss_pred HHHhhhCCCcccCCCCCCCCCCCCCCchhhHHHhhh
Q 024201 235 LQYVQENPDEVCPAGWKPGDKSMKPDPKLSKEYFAA 270 (271)
Q Consensus 235 l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 270 (271)
|+..+++ +++||++|++|++.+.+++.+.++||+.
T Consensus 182 L~~~~~~-~~~cp~~W~~g~~~~~~~~~~~~~~~~~ 216 (221)
T 2c0d_A 182 IIHVDTS-GEVCPINWKKGQKAFKPTTESLIDYMNN 216 (221)
T ss_dssp HHHHHHH-CCSCC-----------------------
T ss_pred HhhhhcC-CCcCCCCCCCCCccccCCcHHHHHHHHh
Confidence 9987776 8999999999999999999999999973
No 11
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=100.00 E-value=3.2e-38 Score=262.95 Aligned_cols=178 Identities=37% Similarity=0.724 Sum_probs=159.3
Q ss_pred CCCCCCCCeEEeeecCCCc--eeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHH
Q 024201 79 LVGNTAPDFAAEAVFDQEF--INVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSH 156 (271)
Q Consensus 79 ~~G~~~Pdf~l~~~~~~~g--~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~ 156 (271)
.+|+++|+|++.++. +| +.++|++++|| ++||+||+++|||+|+.+++.|++++++|+++|++||+||.|+.+.+
T Consensus 2 ~~G~~aP~f~l~~~~--~G~~~~v~l~~~~Gk-~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~~v~vv~Is~d~~~~~ 78 (186)
T 1n8j_A 2 LINTKIKPFKNQAFK--NGEFIEVTEKDTEGR-WSVFFFYPADFTFVSPTELGDVADHYEELQKLGVDVYSVSTDTHFTH 78 (186)
T ss_dssp CTTCBCCCCEEEEEE--TTEEEEEEHHHHTTS-EEEEEECSCTTCSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHH
T ss_pred CCCCcCCCcEeeccc--CCcceEEEHHHHCCC-eEEEEEECCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHH
Confidence 479999999998542 35 79999999998 99999997799999999999999999999999999999999999999
Q ss_pred HHHHHHhhhcCCCCCcccceEEcCChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHHH
Q 024201 157 LAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQ 236 (271)
Q Consensus 157 ~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l~ 236 (271)
++|.+.+. +..+++|+++.|.++++++.||+.....|+..|++||||++|+|++.+.+....+++.+++++.|++|+
T Consensus 79 ~~~~~~~~---~~~~~~fp~l~D~~~~~~~~ygv~~~~~g~~~p~~~lID~~G~i~~~~~~~~~~~~~~~~l~~~l~~l~ 155 (186)
T 1n8j_A 79 KAWHSSSE---TIAKIKYAMIGDPTGALTRNFDNMREDEGLADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQ 155 (186)
T ss_dssp HHHHHHCT---TGGGCCSEEEECTTSHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HHHHHHcC---cccCCceeEEECCchHHHHHhCCccCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 99988762 222578999999999999999998655565689999999999999999877666778999999999999
Q ss_pred HhhhCCCcccCCCCCCCCCCCCCCch
Q 024201 237 YVQENPDEVCPAGWKPGDKSMKPDPK 262 (271)
Q Consensus 237 ~~~~~~~~~~p~~~~~~~~~~~~~~~ 262 (271)
...++|+++||++|++|++++.+++.
T Consensus 156 ~~~~~p~~~~p~~w~~~~~~~~~~~~ 181 (186)
T 1n8j_A 156 YVAAHPGEVCPAKWKEGEATLAPSLD 181 (186)
T ss_dssp HHHHSTTCBBCTTCCTTSCCBCCSST
T ss_pred HHhhcCCCccCCCCCCCCccccCChH
Confidence 99999999999999999999998854
No 12
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=100.00 E-value=1.1e-37 Score=266.95 Aligned_cols=185 Identities=54% Similarity=0.951 Sum_probs=167.7
Q ss_pred cCCCCCCCCCCeEEeeecCCCceeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHH
Q 024201 76 IPPLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFS 155 (271)
Q Consensus 76 ~~~~~G~~~Pdf~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~ 155 (271)
+.+.+|+++|+|++.++.+.+|++++|++++|| ++||+||.++||++|+.+++.|++++++|+++|++||+|++|+.++
T Consensus 38 ~~l~~G~~aP~f~l~~~~d~~G~~v~l~~~~Gk-~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv~Is~D~~~~ 116 (222)
T 3ztl_A 38 MVLLPNRPAPEFKGQAVINGEFKEICLKDYRGK-YVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDSQYS 116 (222)
T ss_dssp --CCSSEECCCCEEEEEETTEEEEEEGGGGTTS-EEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHH
T ss_pred ccccCCCCCCCeEEecccCCCCcEEeHHHhCCC-eEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHH
Confidence 348899999999999776778899999999998 9999999669999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhcCCCCCcccceEEcCChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHH
Q 024201 156 HLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l 235 (271)
..+|.+.+.+..+..+++|+++.|.+.++++.||+.....|+.+|++||||++|+|++.+.+....++.++++++.|+++
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~I~~~~~g~~~~~~~~~~il~~l~~l 196 (222)
T 3ztl_A 117 HLAWDNLDRKSGGLGHMKIPLLADRKQEISKAYGVFDEEDGNAFRGLFIIDPNGILRQITINDKPVGRSVDETLRLLDAF 196 (222)
T ss_dssp HHHHHHSCGGGTSCCSCSSCEEECSSSHHHHHTTCBCTTTSSBCEEEEEECTTSEEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HHHHHHHhhhhccccccceeEEeCCchHHHHHcCCeecCCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHh
Confidence 99999998777666688999999999999999999977778789999999999999999988877778899999999999
Q ss_pred HHhhhCCCcccCCCCCCCCCCCCCCch
Q 024201 236 QYVQENPDEVCPAGWKPGDKSMKPDPK 262 (271)
Q Consensus 236 ~~~~~~~~~~~p~~~~~~~~~~~~~~~ 262 (271)
+.++++ +++||++|+++++.+.|+++
T Consensus 197 ~~~~~~-~~~c~~~w~~~~~~~~~~~~ 222 (222)
T 3ztl_A 197 QFVEKH-GEVCPVNWKRGQHGIKVNQK 222 (222)
T ss_dssp HHHHHH-SCBBCTTCCTTSCCBCC---
T ss_pred hccccc-CccCCcCcCCCCccccCCCC
Confidence 999887 79999999999999998864
No 13
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=100.00 E-value=1.1e-37 Score=260.31 Aligned_cols=188 Identities=51% Similarity=0.880 Sum_probs=154.4
Q ss_pred CCCCCCCCeEEeeecCCCc--eeEecccc-cCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHH
Q 024201 79 LVGNTAPDFAAEAVFDQEF--INVKLSDY-IGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFS 155 (271)
Q Consensus 79 ~~G~~~Pdf~l~~~~~~~g--~~v~Lsd~-~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~ 155 (271)
++|+++|+|++.++. .+| +.++|+++ +|| ++||+||+++|||+|+.+++.|++++++|+++|++||+||+|+.+.
T Consensus 1 ~~G~~aP~f~l~~~~-~~G~~~~~~l~~~~~gk-~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~Is~d~~~~ 78 (192)
T 2h01_A 1 AFQGQAPSFKAEAVF-GDNTFGEVSLSDFIGKK-YVLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELLGCSVDSKFT 78 (192)
T ss_dssp CCSSBCCCCEEEEEC-TTSCEEEEEGGGGTTTC-EEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTTEEEEEEESSCHHH
T ss_pred CCCCcCCCcEeEeee-cCCceeEEeHHHHcCCC-eEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeCCHHH
Confidence 379999999998441 167 89999999 998 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhcCCCCCcccceEEcCChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHH
Q 024201 156 HLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l 235 (271)
+++|.+.+.+..++.+++|+++.|.+.++++.||+.. ..|+.+|++||||++|+|++.+.+....+.+.+++++.|+++
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~-~~g~~~P~~~liD~~G~i~~~~~g~~~~~~~~~~l~~~l~~l 157 (192)
T 2h01_A 79 HLAWKKTPLSQGGIGNIKHTLISDISKSIARSYDVLF-NESVALRAFVLIDKQGVVQHLLVNNLALGRSVDEILRLIDAL 157 (192)
T ss_dssp HHHHHTSCGGGTCCCSCSSEEEECTTSHHHHHTTCEE-TTTEECCEEEEECTTSBEEEEEEGGGSSGGGHHHHHHHHHHH
T ss_pred HHHHHHhHHhhCCccCCCcCeEECCcHHHHHHhCCcC-cCCceeeEEEEEcCCCEEEEEEeCCCCCCCCHHHHHHHHHHH
Confidence 9999998877666667899999999999999999986 556678999999999999999887766677899999999999
Q ss_pred HHhhhCCCcccCCCCCCCCCCCCCCchhhHHHhhh
Q 024201 236 QYVQENPDEVCPAGWKPGDKSMKPDPKLSKEYFAA 270 (271)
Q Consensus 236 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 270 (271)
+..+++ +++||++|++|++++.|.+..-++||..
T Consensus 158 ~~~~~~-~~~cp~~w~~~~~~~~~~~~~~~~~~~~ 191 (192)
T 2h01_A 158 QHHEKY-GDVCPANWQKGKESMKPSEEGVAKYLSN 191 (192)
T ss_dssp HHHHHH-CCCCCSSCCCC-----------------
T ss_pred hhhhhc-CCCccCCCCCCCccccCCchhhhhHhhc
Confidence 987776 8999999999999999999999999975
No 14
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=100.00 E-value=9.2e-38 Score=269.35 Aligned_cols=180 Identities=29% Similarity=0.540 Sum_probs=159.1
Q ss_pred CCCCCCCCCCeEEeeecCCCceeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHH
Q 024201 77 PPLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSH 156 (271)
Q Consensus 77 ~~~~G~~~Pdf~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~ 156 (271)
.+.+|+.+|+|++. +.+| .++|++++|++++||+||+++|||+|+.+++.|++++++|+++|++||+||+|+.+.+
T Consensus 2 ~l~iG~~aPdF~l~---~~~G-~v~l~d~~Gk~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~~v~vigIS~D~~~~~ 77 (233)
T 2v2g_A 2 GITLGEVFPNFEAD---STIG-KLKFHDWLGNSWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKRGVKLIALSCDNVADH 77 (233)
T ss_dssp CCCTTCBCCCCEEE---ETTC-CEEHHHHHCSSEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHH
T ss_pred CCCCCCCCCCcEEe---cCCC-CEEHHHHCCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHcCCEEEEEcCCCHHHH
Confidence 37799999999998 5567 8999999998799999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhcCCCC-CcccceEEcCChHHHHHhCCccCC----C--CccceEEEEEcCCCcEEEEEeccCCCCCCHHHHH
Q 024201 157 LAWVQTDRKSGGLG-DLKYPLIADITKSISKSYGVLIPD----Q--GIALRGLFIIDKEGVIQHSTINNLAIGRSVDETL 229 (271)
Q Consensus 157 ~~~~~~~~~~~~~~-~~~f~~l~D~~~~~~~~ygv~~~~----~--g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l 229 (271)
++|.+...+..+.. +++||++.|.++++++.||+.... . +...|++||||++|+|++.++++...+++.++++
T Consensus 78 ~~~~~~i~~~~~~~~~~~fpil~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~~~gr~~~eil 157 (233)
T 2v2g_A 78 KEWSEDVKCLSGVKGDMPYPIIADETRELAVKLGMVDPDERTSTGMPLTCRAVFIIGPDKKLKLSILYPATTGRNFSEIL 157 (233)
T ss_dssp HHHHHHHHHHHTCCSSCSSCEEECTTCHHHHHTTCEEEEEECTTCCEEECEEEEEECTTSBEEEEEEECTTBCCCHHHHH
T ss_pred HHHHHHHHHhhCcccCCceEEEECChHHHHHHhCCcCcccccCCCcccccceEEEECCCCEEEEEEecCCCCCCCHHHHH
Confidence 99999765432221 578999999999999999997432 1 2368999999999999999988888889999999
Q ss_pred HHHHHHHHhhhCCCcccCCCCCCCCCCCCCCc
Q 024201 230 RTLQALQYVQENPDEVCPAGWKPGDKSMKPDP 261 (271)
Q Consensus 230 ~~l~~l~~~~~~~~~~~p~~~~~~~~~~~~~~ 261 (271)
+.|++||..+++ ++.||++|++|++++.+..
T Consensus 158 r~l~~Lq~~~~~-~~~~p~~W~~g~~~~~~p~ 188 (233)
T 2v2g_A 158 RVIDSLQLTAQK-KVATPADWQPGDRCMVVPG 188 (233)
T ss_dssp HHHHHHHHHHHS-SEEBCTTCCTTSCEEECTT
T ss_pred HHHHHHHhhccC-CccCCCCcCcCCceEeCCC
Confidence 999999998888 8999999999999987553
No 15
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=100.00 E-value=2.6e-37 Score=264.43 Aligned_cols=189 Identities=29% Similarity=0.487 Sum_probs=161.5
Q ss_pred CCCCCCCCCCeEEeeecCCCceeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHH
Q 024201 77 PPLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSH 156 (271)
Q Consensus 77 ~~~~G~~~Pdf~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~ 156 (271)
.+.+|+++|+|++.+. +.+| .++|++++|++++||+||+++|||+|+.+++.|++++++|+++|++||+||+|+.+.+
T Consensus 2 ~l~iG~~aP~F~l~~~-~~~G-~v~l~d~~Gk~~vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~vS~D~~~~~ 79 (220)
T 1xcc_A 2 GYHLGATFPNFTAKAS-GIDG-DFELYKYIENSWAILFSHPNDFTPVCTTELAELGKMHEDFLKLNCKLIGFSCNSKESH 79 (220)
T ss_dssp CCCTTCBCCCCEECBT-TCSS-CEEHHHHTTTSEEEEECCSCTTCHHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHH
T ss_pred CCCCCCCCCCcEeecc-cCCC-cEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHH
Confidence 3679999999999843 1177 8999999998788888877999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhcCCCCCcccceEEcCChHHHHHhCCccCC----CC--ccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHH
Q 024201 157 LAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPD----QG--IALRGLFIIDKEGVIQHSTINNLAIGRSVDETLR 230 (271)
Q Consensus 157 ~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ygv~~~~----~g--~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~ 230 (271)
++|.+...+..+-.+++||++.|.++++++.||+.... .| ...|++||||++|+|++.+.++...+++.+++++
T Consensus 80 ~~~~~~i~~~~~~~~~~fpil~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~flID~~G~I~~~~~~~~~~g~~~~ell~ 159 (220)
T 1xcc_A 80 DKWIEDIKYYGKLNKWEIPIVCDESRELANKLKIMDEQEKDITGLPLTCRCLFFISPEKKIKATVLYPATTGRNAHEILR 159 (220)
T ss_dssp HHHHHHHHHHHTCSCCCCCEEECTTSHHHHHHTCEEEEEECTTSCEEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHH
T ss_pred HHHHHHHHHHhcCCCCcceeEECchhHHHHHhCCCCcccccCCCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHH
Confidence 99998765431113789999999999999999996432 12 3579999999999999999888888899999999
Q ss_pred HHHHHHHhhhCCCcccCCCCCCCCCCCCCC---chhhHHHh
Q 024201 231 TLQALQYVQENPDEVCPAGWKPGDKSMKPD---PKLSKEYF 268 (271)
Q Consensus 231 ~l~~l~~~~~~~~~~~p~~~~~~~~~~~~~---~~~~~~~~ 268 (271)
.|++||...++ ++.||++|++|++++.+. ..--+++|
T Consensus 160 ~i~~lq~~~~~-~~~~p~~w~~g~~~~~~p~~~~~~~~~~~ 199 (220)
T 1xcc_A 160 VLKSLQLTYTT-PVATPVNWNEGDKCCVIPTLQDDEISKHF 199 (220)
T ss_dssp HHHHHHHHHHS-SEEBCTTCCTTSCEEECTTCCGGGHHHHC
T ss_pred HHHHHHhhhcC-CcccCCCcCcCCceEeCCCCCHHHHHHHh
Confidence 99999999998 899999999999997654 33345555
No 16
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=100.00 E-value=8.6e-37 Score=261.88 Aligned_cols=186 Identities=31% Similarity=0.533 Sum_probs=163.0
Q ss_pred CCCCCCCCCeEEeeecCCCceeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHH
Q 024201 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHL 157 (271)
Q Consensus 78 ~~~G~~~Pdf~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~ 157 (271)
+.+|+.+|+|++. +.+| .++|++++|++++||+||+++|||+|+.+++.|++++++|+++|++||+||+|+.+.+.
T Consensus 5 l~~G~~aP~F~l~---~~~G-~v~l~d~~Gk~~vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~IS~D~~~~~~ 80 (224)
T 1prx_A 5 LLLGDVAPNFEAN---TTVG-RIRFHDFLGDSWGILFSHPRDFTPVCTTELGRAAKLAPEFAKRNVKLIALSIDSVEDHL 80 (224)
T ss_dssp CCTTCBCCCCEEE---ETTE-EEEHHHHHTTSEEEEEEESCSSCHHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHHH
T ss_pred CCCcCCCCCcEEe---cCCC-CEEHHHHcCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEcCCCHHHHH
Confidence 6799999999998 5677 89999999987888888779999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcCCC---CCcccceEEcCChHHHHHhCCccCC----C--CccceEEEEEcCCCcEEEEEeccCCCCCCHHHH
Q 024201 158 AWVQTDRKSGGL---GDLKYPLIADITKSISKSYGVLIPD----Q--GIALRGLFIIDKEGVIQHSTINNLAIGRSVDET 228 (271)
Q Consensus 158 ~~~~~~~~~~~~---~~~~f~~l~D~~~~~~~~ygv~~~~----~--g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~ 228 (271)
+|.+...+..++ .+++||++.|.+.++++.||+.... . +...|++||||++|+|++.+.++...+++.+++
T Consensus 81 ~~~~~i~~~~~~~~~~~~~fpil~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~~~gr~~~ei 160 (224)
T 1prx_A 81 AWSKDINAYNSEEPTEKLPFPIIDDRNRELAILLGMLDPAEKDEKGMPVTARVVFVFGPDKKLKLSILYPATTGRNFDEI 160 (224)
T ss_dssp HHHHHHHHHTTSCCCSCCSSCEEECTTCHHHHHTTSSCSCTTCSSSCCTTCCEEEEECTTSBEEEEEECCTTBCCCHHHH
T ss_pred HHHHHHHHhhCcccccCcCcceeecCchHHHHHhCCCCcccccCCCccccceEEEEECCCCEEEEEEecCCCCCCCHHHH
Confidence 999987665543 4789999999999999999997532 1 246899999999999999998888888999999
Q ss_pred HHHHHHHHHhhhCCCcccCCCCCCCCCCCCCC---chhhHHHh
Q 024201 229 LRTLQALQYVQENPDEVCPAGWKPGDKSMKPD---PKLSKEYF 268 (271)
Q Consensus 229 l~~l~~l~~~~~~~~~~~p~~~~~~~~~~~~~---~~~~~~~~ 268 (271)
++.|++||...++ ++.||++|++|++++.+. ..--|++|
T Consensus 161 l~~i~~l~~~~~~-~~~~p~~W~~g~~~~~~p~~~~~~~~~~~ 202 (224)
T 1prx_A 161 LRVVISLQLTAEK-RVATPVDWKDGDSVMVLPTIPEEEAKKLF 202 (224)
T ss_dssp HHHHHHHHHHHHH-CEEBCTTCCTTSCEEECTTSCHHHHHHHC
T ss_pred HHHHHHHHhhccC-CcCCCCCCCCCCceEeCCCCCHHHHHHhh
Confidence 9999999998888 799999999999998754 33345555
No 17
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=100.00 E-value=2.7e-36 Score=262.29 Aligned_cols=181 Identities=35% Similarity=0.720 Sum_probs=164.0
Q ss_pred CCCCCCCCCeEEeeecCCCceeEec-ccc--cCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHH
Q 024201 78 PLVGNTAPDFAAEAVFDQEFINVKL-SDY--IGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVF 154 (271)
Q Consensus 78 ~~~G~~~Pdf~l~~~~~~~g~~v~L-sd~--~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~ 154 (271)
+.+|+++|+|++.+ .+| .++| +++ +|| ++||+||+++|||+|+.+++.|++++++|+++|++||+||+|+.+
T Consensus 5 ~~iG~~aPdF~l~~---~~G-~v~l~~d~l~~GK-~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~gv~VI~VS~Ds~~ 79 (249)
T 3a2v_A 5 PLIGERFPEMEVTT---DHG-VIKLPDHYVSQGK-WFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVF 79 (249)
T ss_dssp CCTTSBCCCEEEEE---TTE-EEEETHHHHTTTC-EEEEECCSCTTCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHH
T ss_pred CCCCCCCCCeEEEc---CCC-CEecHHHHhhCCC-EEEEEEEcCCCCcChHHHHHHHHHHHHHHHhCCcEEEEEECCCHH
Confidence 67999999999984 456 7999 999 998 888777779999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcCCCCCcccceEEcCChHHHHHhCCccCCCCc-cceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHH
Q 024201 155 SHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGI-ALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQ 233 (271)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ygv~~~~~g~-~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~ 233 (271)
.+.+|.+.+.+..+. +++||++.|.+.++++.||+.....|. .+|++||||++|+|++..+++...+++.+++++.|+
T Consensus 80 ~~~~w~~~~~~~~~~-~i~fPil~D~~~~ia~~ygv~~~~~g~~~~p~~fIID~dG~I~~~~~~~~~~gr~~~Ellr~I~ 158 (249)
T 3a2v_A 80 SHIKWKEWIERHIGV-RIPFPIIADPQGTVARRLGLLHAESATHTVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVK 158 (249)
T ss_dssp HHHHHHHHHHHHTCC-CCCSCEEECTTSHHHHHHTCCCTTCSSSCCEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCC-CCceeEEECCchHHHHHhCCccccCCCcccceEEEECCCCeEEEEEecCCcccchhHHHHHHHH
Confidence 999999987765544 789999999999999999998766665 789999999999999999888888899999999999
Q ss_pred HHHHhhhCCCcccCCCCCC-----CCCCCCCCchhhHH
Q 024201 234 ALQYVQENPDEVCPAGWKP-----GDKSMKPDPKLSKE 266 (271)
Q Consensus 234 ~l~~~~~~~~~~~p~~~~~-----~~~~~~~~~~~~~~ 266 (271)
++|...++ +++||++| | |+++|.|++...++
T Consensus 159 alq~~~~~-~~~~Pa~W-~~~~~~g~~~~~~~~~~~~~ 194 (249)
T 3a2v_A 159 ALKLGDSL-KRAVPADW-PNNEIIGEGLIVPPPTTEDQ 194 (249)
T ss_dssp HHHHHHHH-TCBBCTTT-TSBTTTBTCEEECCCCSHHH
T ss_pred HHHhcccc-CccCCCCC-CCCCCCCCCeecCCCCCHHH
Confidence 99999888 89999999 9 99999998776655
No 18
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=100.00 E-value=7.7e-36 Score=247.97 Aligned_cols=186 Identities=41% Similarity=0.768 Sum_probs=145.3
Q ss_pred CCCCCCCCCeEEeeecCC-CceeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHH
Q 024201 78 PLVGNTAPDFAAEAVFDQ-EFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSH 156 (271)
Q Consensus 78 ~~~G~~~Pdf~l~~~~~~-~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~ 156 (271)
+.+|+++|+|++.+.++. +++.++|++++|| ++||+||+++|||+|+.+++.|.+++++|+++|++||+|+.|+.+..
T Consensus 1 ~~~G~~~P~f~l~~~~g~~~~~~~~l~~~~gk-~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~ 79 (187)
T 1we0_A 1 SLIGTEVQPFRAQAFQSGKDFFEVTEADLKGK-WSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVSTDTHFVH 79 (187)
T ss_dssp CCTTCBCCCCEEEEECSSSCCEEEETTTTSSS-EEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTTEEEEEEESSCHHHH
T ss_pred CCCCCcCCCeEEeccCCCccceEecHHHHCCC-CEEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHH
Confidence 468999999999854332 2239999999998 99999999999999999999999999999998999999999999889
Q ss_pred HHHHHHhhhcCCCCCcccceEEcCChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHHH
Q 024201 157 LAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQ 236 (271)
Q Consensus 157 ~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l~ 236 (271)
++|.+.+.... +++|+++.|.+.++++.||+.....|..+|++||||++|+|++.+.+....+.+.+++++.|+.++
T Consensus 80 ~~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~v~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 156 (187)
T 1we0_A 80 KAWHENSPAVG---SIEYIMIGDPSQTISRQFDVLNEETGLADRGTFIIDPDGVIQAIEINADGIGRDASTLINKVKAAQ 156 (187)
T ss_dssp HHHHHSCHHHH---TCCSEEEECTTCHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTSCCCTTHHHHHHHHHH
T ss_pred HHHHHHhcccc---CCCceEEECCchHHHHHhCCCcCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHh
Confidence 99988763211 578999999999999999998766676799999999999999998887666678999999999999
Q ss_pred HhhhCCCcccCCCCCCCCCCCCCCchhhHHHhhhC
Q 024201 237 YVQENPDEVCPAGWKPGDKSMKPDPKLSKEYFAAI 271 (271)
Q Consensus 237 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 271 (271)
...++|++.||++|++|++++..++. ||++|
T Consensus 157 ~~~~~~~~~~p~~w~~~~~~~~~~~~----~~~~~ 187 (187)
T 1we0_A 157 YVRENPGEVCPAKWEEGGETLKPSLD----IVGKI 187 (187)
T ss_dssp HHHTSTTCCC-------------------------
T ss_pred hhhhCCCcccccccccCCceeecCHH----HhccC
Confidence 99999999999999999999996543 77765
No 19
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=100.00 E-value=5e-35 Score=245.34 Aligned_cols=189 Identities=48% Similarity=0.808 Sum_probs=147.4
Q ss_pred CCCCCCCCCeEEeeecCCCce---eEecccc-cCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCH
Q 024201 78 PLVGNTAPDFAAEAVFDQEFI---NVKLSDY-IGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSV 153 (271)
Q Consensus 78 ~~~G~~~Pdf~l~~~~~~~g~---~v~Lsd~-~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~ 153 (271)
+.+|+++|+|++.+.. .+|+ .++|+++ +|| ++||+||+++|||+|+.+++.|.+++++|+++|++||+|+.|++
T Consensus 1 ~~~G~~~P~f~l~~~~-~~G~~~~~v~l~~~~~gk-~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~ 78 (198)
T 1zof_A 1 MVVTKLAPDFKAPAVL-GNNEVDEHFELSKNLGKN-GVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSIDSE 78 (198)
T ss_dssp CCTTSBCCCCEEEEEC-TTSCEEEEEETTTSCCSS-EEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTTEEEEEEESSCH
T ss_pred CCCCCcCCceEeeccc-CCCcccceEEHHHHhCCC-cEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEECCCH
Confidence 3689999999998431 1677 9999999 998 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhcCCCCCcccceEEcCChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHH
Q 024201 154 FSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQ 233 (271)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~ 233 (271)
+.+++|.+.+.+..+..+++|+++.|.+.++++.||+... .|..+|++||||++|+|++.+.+....+.+.+++++.|+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~-~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~ 157 (198)
T 1zof_A 79 QVHFAWKNTPVEKGGIGQVSFPMVADITKSISRDYDVLFE-EAIALRGAFLIDKNMKVRHAVINDLPLGRNADEMLRMVD 157 (198)
T ss_dssp HHHHHHHTSCGGGTCCCCCSSCEEECTTSHHHHHTTCEET-TTEECEEEEEEETTTEEEEEEEESSSCCCHHHHHHHHHH
T ss_pred HHHHHHHHhhhhcccccCceeEEEECCchHHHHHhCCccc-CCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHH
Confidence 9999999986665555588999999999999999999763 366789999999999999998887666778999999999
Q ss_pred HHHHhhhCCCcccCCCCCCCCCCCCCCchhhHHHhhh
Q 024201 234 ALQYVQENPDEVCPAGWKPGDKSMKPDPKLSKEYFAA 270 (271)
Q Consensus 234 ~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 270 (271)
+++...++ ++.||++|.++++++.+++...++||..
T Consensus 158 ~l~~~~~~-~~~~p~~w~~~~~~~~~~~~~~~~~~~~ 193 (198)
T 1zof_A 158 ALLHFEEH-GEVCPAGWRKGDKGMKATHQGVAEYLKE 193 (198)
T ss_dssp HHHHHHSS-CCCCC-----------------------
T ss_pred HHHHhhcc-CCccCCcCcCCCccccCCcccccceecc
Confidence 99988777 8999999999999999888888888753
No 20
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=100.00 E-value=3.8e-34 Score=232.03 Aligned_cols=149 Identities=34% Similarity=0.600 Sum_probs=128.6
Q ss_pred CcCCCCCCCCCCeEEeeecCCCceeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHH
Q 024201 75 EIPPLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVF 154 (271)
Q Consensus 75 ~~~~~~G~~~Pdf~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~ 154 (271)
.| +++|+++|+|+|+ +.+|+.++|++++|| ++||+||+++|||+|+.+++.|++++++++++|+.+|+||.|+++
T Consensus 2 ~~-l~vG~~aPdF~l~---~~~G~~~~l~d~~Gk-~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~~~~~v~vs~d~~~ 76 (157)
T 4g2e_A 2 HM-VEIGELAPDFELP---DTELKKVKLSALKGK-VVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVNAVVLGISVDPPF 76 (157)
T ss_dssp CC-CCTTSBCCCCEEE---BTTSCEEEGGGGTTS-CEEEEECSCTTCCC------CCSCGGGGGGGCSSEEEEEESSCHH
T ss_pred Cc-CCCCCCCcCeEeE---CCCCCEEeHHHHCCC-eEEEEecCCCCCCccccchhhcccccccccccCceEeeecccchh
Confidence 45 8999999999998 778889999999998 899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcCCCCCcccceEEcCChHHHHHhCCccCCCC-----ccceEEEEEcCCCcEEEEEeccCCCCC-CHHHH
Q 024201 155 SHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQG-----IALRGLFIIDKEGVIQHSTINNLAIGR-SVDET 228 (271)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ygv~~~~~g-----~~~P~~~lID~~G~V~~~~~~~~~~~~-~~~e~ 228 (271)
.+++|.+++ +++||+++|.+++++++||+.....+ +..|++||||++|+|++.++++...++ +++++
T Consensus 77 ~~~~~~~~~-------~~~~p~l~D~~~~v~~~ygv~~~~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~ei 149 (157)
T 4g2e_A 77 SNKAFKEHN-------KLNFTILSDYNREVVKKYNVAWEFPALPGYVLAKRAVFVIDKEGKVRYKWVSDDPTKEPPYDEI 149 (157)
T ss_dssp HHHHHHHHT-------TCCSEEEECTTSHHHHHTTCEEECTTSTTCEEECEEEEEECTTSBEEEEEEESSTTCCCCHHHH
T ss_pred HHHHHHHHc-------CCcEEEEEcCCcHHHHHcCCccccccCCCcceeeeeEEEECCCCEEEEEEECCCCCCCCCHHHH
Confidence 999999988 78999999999999999999754433 357999999999999999887655444 78999
Q ss_pred HHHHHHH
Q 024201 229 LRTLQAL 235 (271)
Q Consensus 229 l~~l~~l 235 (271)
++.|++|
T Consensus 150 l~~l~~L 156 (157)
T 4g2e_A 150 EKVVKSL 156 (157)
T ss_dssp HHHHHHT
T ss_pred HHHHHHh
Confidence 9999876
No 21
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=100.00 E-value=1.3e-32 Score=230.15 Aligned_cols=174 Identities=39% Similarity=0.711 Sum_probs=136.4
Q ss_pred CCCCCCCCCeEEeeecC----------CCc--eeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEE
Q 024201 78 PLVGNTAPDFAAEAVFD----------QEF--INVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEI 145 (271)
Q Consensus 78 ~~~G~~~Pdf~l~~~~~----------~~g--~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~v 145 (271)
+.+|+++|+|++.+.++ .+| +.++|++++|| ++||+||+++|||+|+.+++.|.+++++|+++|++|
T Consensus 4 l~~G~~~P~f~l~~~~~~~~~~~~~~~~~G~~~~v~l~~~~gk-~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~v 82 (195)
T 2bmx_A 4 LTIGDQFPAYQLTALIGGDLSKVDAKQPGDYFTTITSDEHPGK-WRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQI 82 (195)
T ss_dssp CCTTCBCCCCEEEEECSSCGGGSCCSSGGGGEEEEETTSSTTC-EEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTTEEE
T ss_pred CCCCCcCCCcCcccccccccccccccccCCCccEeeHHHhCCC-cEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCCCEE
Confidence 67999999999996642 126 89999999998 999999999999999999999999999999889999
Q ss_pred EEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCH
Q 024201 146 LGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSV 225 (271)
Q Consensus 146 v~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~ 225 (271)
|+|++|+.+..++|.+.+... .+++|+++.|.+.++++.||+... .|..+|++||||++|+|++.+.+......+.
T Consensus 83 v~Vs~d~~~~~~~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~v~~~-~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~ 158 (195)
T 2bmx_A 83 LGVSIDSEFAHFQWRAQHNDL---KTLPFPMLSDIKRELSQAAGVLNA-DGVADRVTFIVDPNNEIQFVSATAGSVGRNV 158 (195)
T ss_dssp EEEESSCHHHHHHHHHHCTTG---GGCCSCEEECTTSHHHHHHTCBCT-TSSBCEEEEEECTTSBEEEEEEECTTCCCCH
T ss_pred EEEECCCHHHHHHHHHHhccc---cCCceeEEeCCchHHHHHhCCccc-CCCccceEEEEcCCCeEEEEEecCCCCCCCH
Confidence 999999999999999876321 257899999999999999999865 5667899999999999999988876666789
Q ss_pred HHHHHHHHHHHHhhhCCCcccCCCCCCCCCCCCCCc
Q 024201 226 DETLRTLQALQYVQENPDEVCPAGWKPGDKSMKPDP 261 (271)
Q Consensus 226 ~e~l~~l~~l~~~~~~~~~~~p~~~~~~~~~~~~~~ 261 (271)
+++++.|+.++. ++.||++|++|++++.+++
T Consensus 159 ~~l~~~l~~l~~-----~~~~p~~w~~~~~~~~~~~ 189 (195)
T 2bmx_A 159 DEVLRVLDALQS-----DELCASNWRKGDPTLDAGE 189 (195)
T ss_dssp HHHHHHHHHHHC------------------------
T ss_pred HHHHHHHHHHhh-----CCCcCcccccCCcccCCCh
Confidence 999999998864 4679999999999998764
No 22
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=100.00 E-value=1e-33 Score=231.35 Aligned_cols=148 Identities=28% Similarity=0.553 Sum_probs=133.2
Q ss_pred CCCCCCCCCeEEeeecCCCceeEecccc--cCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHH
Q 024201 78 PLVGNTAPDFAAEAVFDQEFINVKLSDY--IGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFS 155 (271)
Q Consensus 78 ~~~G~~~Pdf~l~~~~~~~g~~v~Lsd~--~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~ 155 (271)
+++|+++|+|+|+ +.+|+.++|+++ +|| ++||+||+++|||+|+.+++.|++++++|+++|+++|+||.|+++.
T Consensus 5 l~vG~~aPdF~l~---~~~G~~v~Lsd~~~~Gk-~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~~v~vv~is~d~~~~ 80 (164)
T 4gqc_A 5 VELGEKAPDFTLP---NQDFEPVNLYEVLKRGR-PAVLIFFPAAFSPVCTKELCTFRDKMAQLEKANAEVLAISVDSPWC 80 (164)
T ss_dssp CCTTSBCCCCEEE---BTTSCEEEHHHHHHTSS-CEEEEECSCTTCCEECSSCEESCCCGGGGGGSSSEEEEEESSCHHH
T ss_pred ccCCCCCcCcEeE---CCCCCEEEHHHHhcCCC-EEEEEEeCCCCCCCcccchhhhhhhHHHhhccCceEEEecCCCHHH
Confidence 8999999999998 778889999999 787 8999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhcCCCCCcccceEEcCChHHHHHhCCccCC----CCccceEEEEEcCCCcEEEEEeccCCCCC-CHHHHHH
Q 024201 156 HLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPD----QGIALRGLFIIDKEGVIQHSTINNLAIGR-SVDETLR 230 (271)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ygv~~~~----~g~~~P~~~lID~~G~V~~~~~~~~~~~~-~~~e~l~ 230 (271)
+++|.+++ +++||+++|.+++++++||+.... .++..|++||||++|+|++.+++....++ +++++++
T Consensus 81 ~~~~~~~~-------~~~fp~l~D~~~~v~~~ygv~~~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~eil~ 153 (164)
T 4gqc_A 81 LKKFKDEN-------RLAFNLLSDYNREVIKLYNVYHEDLKGLKMVAKRAVFIVKPDGTVAYKWVTDNPLNEPDYDEVVR 153 (164)
T ss_dssp HHHHHHHT-------TCCSEEEECTTSHHHHHTTCEEEEETTEEEEECCEEEEECTTSBEEEEEECSCTTCCCCHHHHHH
T ss_pred HHHHHHhc-------CcccceeecCchHHHHHcCCcccccccCcCCeeeEEEEECCCCEEEEEEEeCCCCCCCCHHHHHH
Confidence 99999988 889999999999999999997433 12457999999999999999887655544 7999999
Q ss_pred HHHHHH
Q 024201 231 TLQALQ 236 (271)
Q Consensus 231 ~l~~l~ 236 (271)
.|++|.
T Consensus 154 ~l~~l~ 159 (164)
T 4gqc_A 154 EANKIA 159 (164)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 998773
No 23
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.97 E-value=8e-31 Score=212.58 Aligned_cols=152 Identities=31% Similarity=0.486 Sum_probs=136.7
Q ss_pred CCCCCCCCCeEEeeecCCCceeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHH
Q 024201 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHL 157 (271)
Q Consensus 78 ~~~G~~~Pdf~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~ 157 (271)
+.+|+++|+|++. +.+|+.+++++++||.++||+||+++|||+|+.+++.|.+++++|+++|++||+|++|+++..+
T Consensus 2 l~~G~~~P~f~l~---~~~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~ 78 (161)
T 3drn_A 2 VKVGDKAPLFEGI---ADNGEKISLSDYIGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVSSDDINSHK 78 (161)
T ss_dssp CCTTSBCCCCEEE---ETTSCEEEGGGTTTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEESCCHHHHH
T ss_pred CCCCCcCCCeEee---cCCCCEEEHHHhcCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHH
Confidence 6799999999998 6778899999999994499999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcCCCCCcccceEEcCChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHHHH
Q 024201 158 AWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQY 237 (271)
Q Consensus 158 ~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l~~ 237 (271)
+|.+.+ +++|+++.|.+.++++.||+.. .+..+|++||||++|+|++.+.+.......++++++.|+++|.
T Consensus 79 ~~~~~~-------~~~~~~~~d~~~~~~~~~~v~~--~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~il~~l~~l~~ 149 (161)
T 3drn_A 79 RFKEKY-------KLPFILVSDPDKKIRELYGAKG--FILPARITFVIDKKGIIRHIYNSQMNPANHVNEALKALKQIKE 149 (161)
T ss_dssp HHHHHT-------TCCSEEEECTTSHHHHHTTCCC--SSSCCCEEEEECTTSBEEEEEECSSCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHh-------CCCceEEECCcHHHHHHcCCCC--cCcccceEEEECCCCEEEEEEecCCCCCcCHHHHHHHHHHhhh
Confidence 999988 7899999999999999999981 1224899999999999999988766667789999999999986
Q ss_pred hhhC
Q 024201 238 VQEN 241 (271)
Q Consensus 238 ~~~~ 241 (271)
....
T Consensus 150 ~~~~ 153 (161)
T 3drn_A 150 EEIS 153 (161)
T ss_dssp HHHC
T ss_pred hhcc
Confidence 6544
No 24
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=99.97 E-value=1.1e-30 Score=215.38 Aligned_cols=150 Identities=21% Similarity=0.342 Sum_probs=131.2
Q ss_pred CcCCCCCCCCCCeEEeeecCCCceeEeccc-ccCCcEEEEEEecCCCCCChH-HHHHHHHHHHHHHHhcCcEEEE-EeCC
Q 024201 75 EIPPLVGNTAPDFAAEAVFDQEFINVKLSD-YIGKKYVILFFYPLDFTFVCP-TEITAFSDRYTEFEKLNTEILG-VSTD 151 (271)
Q Consensus 75 ~~~~~~G~~~Pdf~l~~~~~~~g~~v~Lsd-~~gkk~vvL~F~~~t~Cp~C~-~~l~~L~~~~~~~~~~gv~vv~-VS~d 151 (271)
..++.+|+++|+|++. .+.+|+.++|++ ++|| ++||+||+++|||+|+ .+++.|++++++|+++|+++|+ ||.|
T Consensus 12 ~~~~~vG~~aPdf~l~--~~~~g~~v~L~d~~~gk-~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~gv~vv~~iS~D 88 (173)
T 3mng_A 12 SAPIKVGDAIPAVEVF--EGEPGNKVNLAELFKGK-KGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVVACLSVN 88 (173)
T ss_dssp -CCCCTTCBCCCCEEE--CSSTTCEEEHHHHTTTS-EEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESS
T ss_pred CCCCCCCCCCCCeEee--eCCCCCEEEhHHHhCCC-cEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEEcCC
Confidence 3458899999999997 256778999999 5998 7888888899999999 5999999999999999999997 9999
Q ss_pred CHHHHHHHHHHhhhcCCCCCcc--cceEEcCChHHHHHhCCccCCC-----C--ccceEEEEEcCCCcEEEEEeccCCCC
Q 024201 152 SVFSHLAWVQTDRKSGGLGDLK--YPLIADITKSISKSYGVLIPDQ-----G--IALRGLFIIDKEGVIQHSTINNLAIG 222 (271)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~--f~~l~D~~~~~~~~ygv~~~~~-----g--~~~P~~~lID~~G~V~~~~~~~~~~~ 222 (271)
+++.+++|.+++ +++ |++++|.+++++++||+...+. | ...|++|||| ||+|++.++++...+
T Consensus 89 ~~~~~~~f~~~~-------~~~~~fp~l~D~~~~va~~yGv~~~~~~~~~~g~~~~~r~tfvID-dG~I~~~~v~~~~~g 160 (173)
T 3mng_A 89 DAFVTGEWGRAH-------KAEGKVRLLADPTGAFGKETDLLLDDSLVSIFGNRRLKRFSMVVQ-DGIVKALNVEPDGTG 160 (173)
T ss_dssp CHHHHHHHHHHT-------TCTTTCEEEECTTCHHHHHHTCBCCSTTHHHHSSCCBCCEEEEEE-TTEEEEEEECTTSSC
T ss_pred CHHHHHHHHHHh-------CCCCceEEEECCChHHHHHhCCCcccccccccCCcceEEEEEEEE-CCEEEEEEEeCCCCC
Confidence 999999999998 566 9999999999999999986532 2 3579999999 999999999998888
Q ss_pred CCHHHHHHHHHHH
Q 024201 223 RSVDETLRTLQAL 235 (271)
Q Consensus 223 ~~~~e~l~~l~~l 235 (271)
++++++.+.|+.|
T Consensus 161 ~~~~~~~~vl~~l 173 (173)
T 3mng_A 161 LTCSLAPNIISQL 173 (173)
T ss_dssp SSTTSHHHHHHHC
T ss_pred cchHHHHHHHHhC
Confidence 8887777777653
No 25
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=99.97 E-value=1.7e-30 Score=210.44 Aligned_cols=147 Identities=26% Similarity=0.427 Sum_probs=131.2
Q ss_pred CCCCCCCCCeE--EeeecCCCceeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHH
Q 024201 78 PLVGNTAPDFA--AEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFS 155 (271)
Q Consensus 78 ~~~G~~~Pdf~--l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~ 155 (271)
+++|+++|+|+ +. +.+|++++|++++|| ++||+||+++|||+|+.+++.|++++++|+++|++||+|+.|+++.
T Consensus 7 l~~G~~~P~f~~~l~---~~~G~~~~l~~~~gk-~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~ 82 (163)
T 3gkn_A 7 AVLELPAATFDLPLS---LSGGTQTTLRAHAGH-WLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRDSVKS 82 (163)
T ss_dssp CCCCCCGGGGGCCEE---CSTTCEECSGGGTTS-CEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEESSCHHH
T ss_pred cccCCcCCCcccccc---CCCCCEEEHHHhCCC-cEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHH
Confidence 78999999999 98 778889999999999 9999999669999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhcCCCCCcccceEEcCChHHHHHhCCccCCC--Cc----cceEEEEEcCCCcEEEEEeccCCCCCCHHHHH
Q 024201 156 HLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQ--GI----ALRGLFIIDKEGVIQHSTINNLAIGRSVDETL 229 (271)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ygv~~~~~--g~----~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l 229 (271)
.++|.+++ +++|+++.|.+.++++.||+..... |. .+|++||||++|+|++.+ .+......+++++
T Consensus 83 ~~~~~~~~-------~~~~~~~~d~~~~~~~~~~v~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~-~~~~~~~~~~~il 154 (163)
T 3gkn_A 83 HDNFCAKQ-------GFAFPLVSDGDEALCRAFDVIKEKNMYGKQVLGIERSTFLLSPEGQVVQAW-RKVKVAGHADAVL 154 (163)
T ss_dssp HHHHHHHH-------CCSSCEEECTTCHHHHHTTCEEEEEETTEEEEEECCEEEEECTTSCEEEEE-CSCCSTTHHHHHH
T ss_pred HHHHHHHh-------CCCceEEECCcHHHHHHhCCccccccccccccCcceEEEEECCCCeEEEEE-cCCCcccCHHHHH
Confidence 99999998 7899999999999999999984221 10 189999999999999998 5556667789999
Q ss_pred HHHHHHH
Q 024201 230 RTLQALQ 236 (271)
Q Consensus 230 ~~l~~l~ 236 (271)
+.|++|+
T Consensus 155 ~~l~~l~ 161 (163)
T 3gkn_A 155 AALKAHA 161 (163)
T ss_dssp HHHHHHC
T ss_pred HHHHHHh
Confidence 9988764
No 26
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=99.97 E-value=2.3e-30 Score=220.53 Aligned_cols=160 Identities=16% Similarity=0.228 Sum_probs=136.5
Q ss_pred CCCCCCCCCeEEeeecCCCceeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeC-------
Q 024201 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVST------- 150 (271)
Q Consensus 78 ~~~G~~~Pdf~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~------- 150 (271)
+.+|+++|+|++. +.+|+.++|++++||.++||+|| ++|||+|+.+++.|++++++|+++|++||+|++
T Consensus 32 l~~G~~aP~f~l~---~~~G~~v~l~~~~gk~~vll~F~-a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~ 107 (218)
T 3u5r_E 32 ITLGTRAADFVLP---DAGGNLFTLAEFKDSPALLVAFI-SNRCPFVVLIREALAKFAGDYAGQGLAVVAINSNDAQAFP 107 (218)
T ss_dssp CCTTCBCCCCCEE---CTTCCEECGGGGTTCSEEEEEEC-CSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEECSCTTTCG
T ss_pred CCCCCcCCCcEeE---CCCCCEEeHHHhCCCCeEEEEEE-CCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCcccccc
Confidence 8899999999998 67888999999999955999999 899999999999999999999999999999999
Q ss_pred -CCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCC-----CCCC
Q 024201 151 -DSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLA-----IGRS 224 (271)
Q Consensus 151 -d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~-----~~~~ 224 (271)
|+.+.+++|.+++ +++|+++.|.+.++++.||+. .+|++||||++|+|+++...+.. ....
T Consensus 108 ~d~~~~~~~~~~~~-------~~~~~~l~D~~~~~~~~~~v~------~~P~~~liD~~G~i~~~g~~d~~~~~~~~~~~ 174 (218)
T 3u5r_E 108 EETLERVGAEVKAY-------GYGFPYLKDASQSVAKAYGAA------CTPDFFLYDRERRLVYHGQFDDARPGNGKDVT 174 (218)
T ss_dssp GGSHHHHHHHHHHH-------TCCSCEEECTTCHHHHHHTCC------EESEEEEECTTCBEEEEECSSSCCTTSCCCCC
T ss_pred cCCHHHHHHHHHHh-------CCCccEEECCccHHHHHcCCC------CCCeEEEECCCCcEEEeccccccccccccccC
Confidence 6777888999988 789999999999999999999 89999999999999987432211 1223
Q ss_pred HHHHHHHHHHHHHhh-----hCCCcccCCCCCCCC
Q 024201 225 VDETLRTLQALQYVQ-----ENPDEVCPAGWKPGD 254 (271)
Q Consensus 225 ~~e~l~~l~~l~~~~-----~~~~~~~p~~~~~~~ 254 (271)
.+++.+.|+++...+ +.+..+|+++|++++
T Consensus 175 ~~~l~~~i~~ll~~~~~~~~~~~~~GC~i~w~~~~ 209 (218)
T 3u5r_E 175 GADLRAAVDAVLKGKDVGTTQVPSIGCNIKWTAGN 209 (218)
T ss_dssp CHHHHHHHHHHHTTCCCCSCCCCCEEEECCCCCC-
T ss_pred HHHHHHHHHHHHcCCCCCcCCcCCCCeeEEeCCCC
Confidence 577777887775332 445789999999875
No 27
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=99.97 E-value=2.8e-30 Score=213.51 Aligned_cols=147 Identities=28% Similarity=0.410 Sum_probs=131.8
Q ss_pred CCCCCC----CCCeEEeeecCCCceeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCH
Q 024201 78 PLVGNT----APDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSV 153 (271)
Q Consensus 78 ~~~G~~----~Pdf~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~ 153 (271)
+++|+. +|+|++. +.+|++++|++++|| ++||+||+++|||+|+.+++.|++++++|+++|++||+|+.|++
T Consensus 21 l~~Gd~ig~~aP~f~l~---~~~G~~v~l~d~~Gk-~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~~~vv~Vs~D~~ 96 (179)
T 3ixr_A 21 MNIGDTLNHSLLNHPLM---LSGSTCKTLSDYTNQ-WLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVSRDSV 96 (179)
T ss_dssp SCTTCBCCHHHHHCCEE---EGGGEEECGGGGTTS-EEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEESCCH
T ss_pred cCcCcccCCcCCCeeEE---CCCCCEEeHHHHCCC-CEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEcCCCH
Confidence 788988 9999998 678889999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhcCCCCCcccceEEcCChHHHHHhCCccCCC--C----ccceEEEEEcCCCcEEEEEeccCCCCCCHHH
Q 024201 154 FSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQ--G----IALRGLFIIDKEGVIQHSTINNLAIGRSVDE 227 (271)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ygv~~~~~--g----~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e 227 (271)
+..++|++++ +++|+++.|.+.++++.||+..... | ...|++||||++|+|++.+ .+......+++
T Consensus 97 ~~~~~~~~~~-------~~~f~~l~D~~~~~~~~~gv~~~~~~~g~~~~~~~p~~~lID~~G~I~~~~-~~~~~~~~~~~ 168 (179)
T 3ixr_A 97 KSHDSFCAKQ-------GFTFPLVSDSDAILCKAFDVIKEKTMYGRQVIGIERSTFLIGPTHRIVEAW-RQVKVPGHAEE 168 (179)
T ss_dssp HHHHHHHHHH-------TCCSCEEECTTCHHHHHTTCEEEECCC--CEEEECCEEEEECTTSBEEEEE-CSCCSTTHHHH
T ss_pred HHHHHHHHHc-------CCceEEEECCchHHHHHcCCcccccccCcccCCcceEEEEECCCCEEEEEE-cCCCCCCCHHH
Confidence 9999999998 7899999999999999999974321 1 1369999999999999997 55566678899
Q ss_pred HHHHHHHHH
Q 024201 228 TLRTLQALQ 236 (271)
Q Consensus 228 ~l~~l~~l~ 236 (271)
+++.|++++
T Consensus 169 il~~l~~l~ 177 (179)
T 3ixr_A 169 VLNKLKAHA 177 (179)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999998875
No 28
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=99.97 E-value=1.3e-29 Score=205.87 Aligned_cols=145 Identities=24% Similarity=0.404 Sum_probs=129.7
Q ss_pred CCCCCCCCCeEEeeecCCCceeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHH
Q 024201 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHL 157 (271)
Q Consensus 78 ~~~G~~~Pdf~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~ 157 (271)
+.+|+++|+|++. +.+|+.++|++++|| ++||+||+++||++|+.+++.|++++++| +|++||+||.|+++.++
T Consensus 16 ~~~G~~~P~f~l~---~~~G~~v~l~~~~gk-~vvl~F~~~~~c~~C~~~~~~l~~~~~~~--~~v~vv~is~d~~~~~~ 89 (163)
T 1psq_A 16 LQVGDKALDFSLT---TTDLSKKSLADFDGK-KKVLSVVPSIDTGICSTQTRRFNEELAGL--DNTVVLTVSMDLPFAQK 89 (163)
T ss_dssp CCTTSBCCCCEEE---CTTSCEEEGGGGTTS-EEEEEECSCTTSHHHHHHHHHHHHHTTTC--TTEEEEEEESSCHHHHH
T ss_pred CCCCCCCCCEEEE---cCCCcEeeHHHhCCC-EEEEEEECCCCCCccHHHHHHHHHHHHHc--CCcEEEEEECCCHHHHH
Confidence 7899999999998 778889999999998 89999997799999999999999999999 69999999999999999
Q ss_pred HHHHHhhhcCCCCCc-ccceEEc-CChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccC-CCCCCHHHHHHHHHH
Q 024201 158 AWVQTDRKSGGLGDL-KYPLIAD-ITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNL-AIGRSVDETLRTLQA 234 (271)
Q Consensus 158 ~~~~~~~~~~~~~~~-~f~~l~D-~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~-~~~~~~~e~l~~l~~ 234 (271)
+|.+++ ++ +|+++.| .++++++.||+.....|+..|++||||++|+|++.+.+.. ....+.+++++.|++
T Consensus 90 ~~~~~~-------~~~~~~~l~D~~~~~~~~~~gv~~~~~g~~~p~~~liD~~G~i~~~~~g~~~~~~~~~~~~l~~l~~ 162 (163)
T 1psq_A 90 RWCGAE-------GLDNAIMLSDYFDHSFGRDYALLINEWHLLARAVFVLDTDNTIRYVEYVDNINSEPNFEAAIAAAKA 162 (163)
T ss_dssp HHHHHH-------TCTTSEEEECTTTCHHHHHHTCBCTTTCSBCCEEEEECTTCBEEEEEECSBTTSCCCHHHHHHHHHH
T ss_pred HHHHhc-------CCCCcEEecCCchhHHHHHhCCccccCCceEEEEEEEcCCCeEEEEEecCCcCCCCCHHHHHHHHHh
Confidence 999998 77 8999999 8899999999986555666799999999999999987643 344578999998875
Q ss_pred H
Q 024201 235 L 235 (271)
Q Consensus 235 l 235 (271)
|
T Consensus 163 l 163 (163)
T 1psq_A 163 L 163 (163)
T ss_dssp C
T ss_pred C
Confidence 4
No 29
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=99.97 E-value=1.4e-29 Score=206.46 Aligned_cols=148 Identities=23% Similarity=0.348 Sum_probs=131.3
Q ss_pred cccCcCCCCCCCCCCeEEeeecCCCceeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCC
Q 024201 72 ASVEIPPLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTD 151 (271)
Q Consensus 72 ~~~~~~~~~G~~~Pdf~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d 151 (271)
..+.. +.+|+++|+|++. +.+|+.++|++++|| ++||+||+++|||+|+.+++.|++++++ +|++||+||.|
T Consensus 15 ~~~~~-l~~G~~aP~f~l~---~~~G~~~~l~~~~Gk-~vvl~f~~~~~c~~C~~~~~~l~~~~~~---~~~~vv~is~d 86 (166)
T 3p7x_A 15 LKGQQ-INEGDFAPDFTVL---DNDLNQVTLADYAGK-KKLISVVPSIDTGVCDQQTRKFNSDASK---EEGIVLTISAD 86 (166)
T ss_dssp EESCC-CCTTSBCCCCEEE---CTTSCEEEGGGGTTS-CEEEEECSCTTSHHHHHHHHHHHHHSCT---TTSEEEEEESS
T ss_pred eeccc-CCCCCCCCCeEEE---cCCCCEEeHHHhCCC-cEEEEEECCCCCCccHHHHHHHHHHhhc---CCCEEEEEECC
Confidence 33444 8899999999998 778889999999998 8999999899999999999999999988 69999999999
Q ss_pred CHHHHHHHHHHhhhcCCCCCc-ccceEEcC-ChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEecc-CCCCCCHHHH
Q 024201 152 SVFSHLAWVQTDRKSGGLGDL-KYPLIADI-TKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINN-LAIGRSVDET 228 (271)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~-~f~~l~D~-~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~-~~~~~~~~e~ 228 (271)
+++.+++|.+++ ++ +|+++.|. +.++++.||+.....|...|++||||++|+|++.+++. .....+.+++
T Consensus 87 ~~~~~~~~~~~~-------~~~~~~~l~D~~~~~~~~~~gv~~~~~g~~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~i 159 (166)
T 3p7x_A 87 LPFAQKRWCASA-------GLDNVITLSDHRDLSFGENYGVVMEELRLLARAVFVLDADNKVVYKEIVSEGTDFPDFDAA 159 (166)
T ss_dssp CHHHHHHHHHHH-------TCSSCEEEECTTTCHHHHHHTCEETTTTEECCEEEEECTTCBEEEEEECSBTTSCCCHHHH
T ss_pred CHHHHHHHHHHc-------CCCceEEccCCchhHHHHHhCCccccCCceeeEEEEECCCCeEEEEEEcCCcccCCCHHHH
Confidence 999999999998 77 89999999 89999999999766666689999999999999997654 3445678999
Q ss_pred HHHHHH
Q 024201 229 LRTLQA 234 (271)
Q Consensus 229 l~~l~~ 234 (271)
++.|+.
T Consensus 160 l~~l~~ 165 (166)
T 3p7x_A 160 LAAYKN 165 (166)
T ss_dssp HHHHHT
T ss_pred HHHHhc
Confidence 988875
No 30
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=99.96 E-value=2.7e-29 Score=202.58 Aligned_cols=151 Identities=34% Similarity=0.593 Sum_probs=134.4
Q ss_pred CcCCCCCCCCCCeEEeeecCCCceeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHH
Q 024201 75 EIPPLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVF 154 (271)
Q Consensus 75 ~~~~~~G~~~Pdf~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~ 154 (271)
.| +.+|+++|+|++. +.+|+.+++++++||+++||+||+++||++|+.+++.|.+++++|+++|+++|+|++|+.+
T Consensus 7 ~~-~~~G~~~p~f~l~---~~~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is~d~~~ 82 (160)
T 1xvw_A 7 HM-LNVGATAPDFTLR---DQNQQLVTLRGYRGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISVGPPP 82 (160)
T ss_dssp CC-CCTTSBCCCCEEE---CTTSCEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEESCCHH
T ss_pred CC-CCCCCCCCCeEeE---cCCCCEEeHHHhcCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEeCCCHH
Confidence 35 7899999999998 6788899999999987899999889999999999999999999998889999999999999
Q ss_pred HHHHHHHHhhhcCCCCCcccceEEcC--ChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHH
Q 024201 155 SHLAWVQTDRKSGGLGDLKYPLIADI--TKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTL 232 (271)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~f~~l~D~--~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l 232 (271)
..++|.+++ +++|+++.|. +.++++.||+.....|+..|++||||++|+|++.+.+.......++++++.|
T Consensus 83 ~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~v~~~~~~~p~~~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l 155 (160)
T 1xvw_A 83 THKIWATQS-------GFTFPLLSDFWPHGAVSQAYGVFNEQAGIANRGTFVVDRSGIIRFAEMKQPGEVRDQRLWTDAL 155 (160)
T ss_dssp HHHHHHHHH-------TCCSCEEECTTTTTHHHHHTTCEETTTTEECSEEEEECTTSBEEEEEECCTTCCCCHHHHHHHH
T ss_pred HHHHHHHhc-------CCCceEEecCCcChHHHHHcCCccccCCCeeeeEEEECCCCeEEEEEecCCCCCCCHHHHHHHH
Confidence 999999998 7899999996 8999999999855444444599999999999999888766666899999999
Q ss_pred HHHH
Q 024201 233 QALQ 236 (271)
Q Consensus 233 ~~l~ 236 (271)
++++
T Consensus 156 ~~l~ 159 (160)
T 1xvw_A 156 AALT 159 (160)
T ss_dssp HHTC
T ss_pred HHhc
Confidence 8764
No 31
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=99.96 E-value=2.6e-29 Score=204.70 Aligned_cols=142 Identities=22% Similarity=0.413 Sum_probs=125.1
Q ss_pred CCCCCCCCCeEEeeecCCCceeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHH
Q 024201 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHL 157 (271)
Q Consensus 78 ~~~G~~~Pdf~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~ 157 (271)
+.+|+++|+|++. +.+|+.++|++++|| ++||+||+++|||+|+.+++.|++++++| +|++||+||.|+++.++
T Consensus 17 ~~~G~~~P~f~l~---~~~G~~v~l~~~~gk-~vvl~f~~~~~c~~C~~e~~~l~~~~~~~--~~v~vv~Is~d~~~~~~ 90 (165)
T 1q98_A 17 PQVGEIVENFILV---GNDLADVALNDFASK-RKVLNIFPSIDTGVCATSVRKFNQQAAKL--SNTIVLCISADLPFAQA 90 (165)
T ss_dssp CCTTCBCCCCEEE---CTTSCEEEGGGGTTS-EEEEEECSCSCSSCCCHHHHHHHHHHHHS--TTEEEEEEESSCHHHHT
T ss_pred CCCCCCCCCeEEE---CCCCCEEehHHhCCC-eEEEEEECCCCCCccHHHHHHHHHHHHHc--CCCEEEEEeCCCHHHHH
Confidence 7899999999998 778889999999998 89999998999999999999999999999 69999999999988888
Q ss_pred HHHHHhhhcCCCCCc-ccceEEcC-ChHHHHHhCCccCC---CCccceEEEEEcCCCcEEEEEec-cCCCCCCHHHHHHH
Q 024201 158 AWVQTDRKSGGLGDL-KYPLIADI-TKSISKSYGVLIPD---QGIALRGLFIIDKEGVIQHSTIN-NLAIGRSVDETLRT 231 (271)
Q Consensus 158 ~~~~~~~~~~~~~~~-~f~~l~D~-~~~~~~~ygv~~~~---~g~~~P~~~lID~~G~V~~~~~~-~~~~~~~~~e~l~~ 231 (271)
+|.+++ ++ +|+++.|. +.++++.||+.... .|.+.|++||||++|+|++.+.+ +.....+++++++.
T Consensus 91 ~~~~~~-------~~~~~~~l~D~~~~~~~~~~gv~~~~~~~~g~~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~~l~~ 163 (165)
T 1q98_A 91 RFCGAE-------GIENAKTVSTFRNHALHSQLGVDIQTGPLAGLTSRAVIVLDEQNNVLHSQLVEEIKEEPNYEAALAV 163 (165)
T ss_dssp TCTTTT-------TCTTEEEEECTTCTHHHHHTTCEECSSTTTTSBCCEEEEECTTSBEEEEEECSBTTSCCCHHHHHHT
T ss_pred HHHHHc-------CCCceEEeeccccchHHHHhCceecccccCCccceeEEEEcCCCEEEEEEeCCCCCCCCCHHHHHHh
Confidence 888876 67 79999998 89999999997532 34567999999999999999875 44556678888876
Q ss_pred H
Q 024201 232 L 232 (271)
Q Consensus 232 l 232 (271)
|
T Consensus 164 l 164 (165)
T 1q98_A 164 L 164 (165)
T ss_dssp T
T ss_pred h
Confidence 5
No 32
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=99.96 E-value=3.5e-29 Score=203.59 Aligned_cols=144 Identities=24% Similarity=0.368 Sum_probs=124.8
Q ss_pred CCCCCCCCCCeEEeeecCCCc--eeEeccc-ccCCcEEEEEEecCCCCCChH-HHHHHHHHHHHHHHhcCcE-EEEEeCC
Q 024201 77 PPLVGNTAPDFAAEAVFDQEF--INVKLSD-YIGKKYVILFFYPLDFTFVCP-TEITAFSDRYTEFEKLNTE-ILGVSTD 151 (271)
Q Consensus 77 ~~~~G~~~Pdf~l~~~~~~~g--~~v~Lsd-~~gkk~vvL~F~~~t~Cp~C~-~~l~~L~~~~~~~~~~gv~-vv~VS~d 151 (271)
.+++|+++|+|++... +.+| +.++|++ ++|| ++||+||+++|||+|+ .+++.|++++++|+++|++ ||+||.|
T Consensus 3 ~~~~G~~aP~f~l~~~-~~~G~~~~~~l~~~~~gk-~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~~v~~vv~Is~d 80 (162)
T 1tp9_A 3 PIAVGDVLPDGKLAYF-DEQDQLQEVSVHSLVAGK-KVILFGVPGAFTPTCSLKHVPGFIEKAGELKSKGVTEILCISVN 80 (162)
T ss_dssp CCCTTCBCCCCEEEEE-CTTSCEEEEESHHHHTTS-EEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCCEEEEESS
T ss_pred cCCCCCCCCCeEEEee-cCCCCceeEeHHHHhCCC-cEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECC
Confidence 4789999999998632 5678 8999999 8998 8999999999999999 8999999999999999999 9999999
Q ss_pred CHHHHHHHHHHhhhcCCCCCc--ccceEEcCChHHHHHhCCccCC--CCc---cceEEEEEcCCCcEEEEEeccCCCCC-
Q 024201 152 SVFSHLAWVQTDRKSGGLGDL--KYPLIADITKSISKSYGVLIPD--QGI---ALRGLFIIDKEGVIQHSTINNLAIGR- 223 (271)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~--~f~~l~D~~~~~~~~ygv~~~~--~g~---~~P~~~lID~~G~V~~~~~~~~~~~~- 223 (271)
+++.+++|.+++ ++ +|+++.|.+++++++||+.... .|+ ..|++|||| +|+|++.++++ ..++
T Consensus 81 ~~~~~~~~~~~~-------~~~~~~~~l~D~~~~~~~~~gv~~~~~~~g~~~~~~p~~~vid-~G~i~~~~~~~-~~~~~ 151 (162)
T 1tp9_A 81 DPFVMKAWAKSY-------PENKHVKFLADGSATYTHALGLELDLQEKGLGTRSRRFALLVD-DLKVKAANIEG-GGEFT 151 (162)
T ss_dssp CHHHHHHHHHTC-------TTCSSEEEEECTTSHHHHHTTCEEEETTTTSEEEECCEEEEEE-TTEEEEEEECS-SSCCS
T ss_pred CHHHHHHHHHhc-------CCCCCeEEEECCCchHHHHcCcccccccCCCCccceeEEEEEE-CCEEEEEEeeC-CCCCc
Confidence 999999999987 56 7999999999999999997432 232 479999999 99999999876 4333
Q ss_pred --CHHHHHHH
Q 024201 224 --SVDETLRT 231 (271)
Q Consensus 224 --~~~e~l~~ 231 (271)
+++++++.
T Consensus 152 ~~~~~~vl~~ 161 (162)
T 1tp9_A 152 VSSAEDILKD 161 (162)
T ss_dssp SCSHHHHHTT
T ss_pred cCCHHHHHhh
Confidence 57877754
No 33
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=99.96 E-value=6.5e-29 Score=203.24 Aligned_cols=150 Identities=23% Similarity=0.322 Sum_probs=130.7
Q ss_pred ecccCcCCCCCCCCCCeEEeeecCCCceeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeC
Q 024201 71 KASVEIPPLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVST 150 (271)
Q Consensus 71 ~~~~~~~~~~G~~~Pdf~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~ 150 (271)
...+.. +.+|+++|+|++. +.+|+.+++++++|| ++||+||+++|||+|+.+++.|++++++| +|++||+||.
T Consensus 15 ~~~~~~-l~~g~~~P~f~l~---~~~G~~~~l~~~~gk-~vvl~f~~~~~C~~C~~~~~~l~~~~~~~--~~v~vv~Is~ 87 (171)
T 2yzh_A 15 TLVGPE-LKVGDRAPEAVVV---TKDLQEKIVGGAKDV-VQVIITVPSLDTPVCETETKKFNEIMAGM--EGVDVTVVSM 87 (171)
T ss_dssp EBCSCC-CCTTSBCCCEEEE---ETTSCEEEESSCCSS-EEEEEECSCTTSHHHHHHHHHHHHHTTTC--TTEEEEEEES
T ss_pred eecCCc-CCCCCcCCceEEE---CCCCCEeeHHHhCCC-eEEEEEECCCCCCchHHHHHHHHHHHHHc--CCceEEEEeC
Confidence 334444 8899999999998 677889999999998 89999998999999999999999999999 6999999999
Q ss_pred CCHHHHHHHHHHhhhcCCCCCc-ccceEEc-CChHHHHHhCCccCC---CCccceEEEEEcCCCcEEEEEeccC-CCCCC
Q 024201 151 DSVFSHLAWVQTDRKSGGLGDL-KYPLIAD-ITKSISKSYGVLIPD---QGIALRGLFIIDKEGVIQHSTINNL-AIGRS 224 (271)
Q Consensus 151 d~~~~~~~~~~~~~~~~~~~~~-~f~~l~D-~~~~~~~~ygv~~~~---~g~~~P~~~lID~~G~V~~~~~~~~-~~~~~ 224 (271)
|+++.+++|.+++ ++ +|+++.| .+.++ +.||+.... .|+..|++||||++|+|++.+.+.. ....+
T Consensus 88 d~~~~~~~~~~~~-------~~~~~~~l~D~~~~~~-~~~gv~~~~~~~~g~~~p~~~liD~~G~i~~~~~~~~~~~~~~ 159 (171)
T 2yzh_A 88 DLPFAQKRFCESF-------NIQNVTVASDFRYRDM-EKYGVLIGEGALKGILARAVFIIDKEGKVAYVQLVPEITEEPN 159 (171)
T ss_dssp SCHHHHHHHHHHT-------TCCSSEEEECTTTCGG-GGGTCBBCSSTTTTSBCCEEEEECTTSBEEEEEECSBTTSCCC
T ss_pred CCHHHHHHHHHHc-------CCCCeEEeecCccCcH-HHhCCEecccccCCceeeEEEEEcCCCeEEEEEeCCCcCCCCC
Confidence 9999999999987 67 8999999 78899 999998543 3556899999999999999987643 34557
Q ss_pred HHHHHHHHHHH
Q 024201 225 VDETLRTLQAL 235 (271)
Q Consensus 225 ~~e~l~~l~~l 235 (271)
.+++++.|++|
T Consensus 160 ~~~ll~~l~~l 170 (171)
T 2yzh_A 160 YDEVVNKVKEL 170 (171)
T ss_dssp CHHHHHHHHHC
T ss_pred HHHHHHHHHhh
Confidence 89999998875
No 34
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=99.96 E-value=5.4e-29 Score=209.67 Aligned_cols=148 Identities=24% Similarity=0.437 Sum_probs=130.2
Q ss_pred ecccCcCCCCCCCCCCeEEeeecCCCceeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeC
Q 024201 71 KASVEIPPLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVST 150 (271)
Q Consensus 71 ~~~~~~~~~~G~~~Pdf~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~ 150 (271)
...+.. +.+|+++|+|++. +.+|+.++|++++|| ++||+||+++||++|+.+++.|++++++| +|++||+||.
T Consensus 46 ~~~~~~-l~~G~~aPdf~l~---d~~G~~v~L~d~~Gk-~vvl~F~~~~~c~~C~~e~~~l~~l~~~~--~~v~vv~Is~ 118 (200)
T 3zrd_A 46 SVAGKL-PQIGDKAKDFTLV---AKDLSDVALSSFAGK-RKVLNIFPSIDTGVCAASVRKFNQLAGEL--ENTVVLCISS 118 (200)
T ss_dssp EEESCC-CCTTCBCCCCEEE---CTTSCEEEGGGGTTS-EEEEEECSCCCCSCCCHHHHHHHHHHHTS--TTEEEEEEES
T ss_pred eeeccc-CCCCCCCCCeEEE---CCCCCEEcHHHhCCC-cEEEEEECCCCCchhHHHHHHHHHHHHHh--CCCEEEEEEC
Confidence 344555 8999999999998 778889999999998 89999998899999999999999999999 6999999999
Q ss_pred CCHHHHHHHHHHhhhcCCCCCc-ccceEEcC-ChHHHHHhCCccCC---CCccceEEEEEcCCCcEEEEEecc-CCCCCC
Q 024201 151 DSVFSHLAWVQTDRKSGGLGDL-KYPLIADI-TKSISKSYGVLIPD---QGIALRGLFIIDKEGVIQHSTINN-LAIGRS 224 (271)
Q Consensus 151 d~~~~~~~~~~~~~~~~~~~~~-~f~~l~D~-~~~~~~~ygv~~~~---~g~~~P~~~lID~~G~V~~~~~~~-~~~~~~ 224 (271)
|+++..++|.+++ ++ +|+++.|. +++++++||+.... .|++.|++||||++|+|++.+++. .....+
T Consensus 119 D~~~~~~~~~~~~-------~~~~f~~l~D~~~~~~~~~ygv~~~~~~~~g~~~p~~~lID~~G~I~~~~~~~~~~~~~~ 191 (200)
T 3zrd_A 119 DLPFAQSRFCGAE-------GLSNVITLSTLRGADFKQAYGVAITEGPLAGLTARAVVVLDGQDNVIYSELVNEITTEPN 191 (200)
T ss_dssp SCHHHHTTCTTTT-------TCTTEEEEETTSCTHHHHHTTCEECSSTTTTSBCCEEEEECTTSBEEEEEECSBTTSCCC
T ss_pred CCHHHHHHHHHHc-------CCCCceEEecCchHHHHHHhCceeecccCCCccccEEEEECCCCeEEEEEecCCcccCCC
Confidence 9998888888876 78 99999999 99999999998544 455689999999999999998754 455667
Q ss_pred HHHHHHHH
Q 024201 225 VDETLRTL 232 (271)
Q Consensus 225 ~~e~l~~l 232 (271)
++++++.|
T Consensus 192 ~~~~l~~L 199 (200)
T 3zrd_A 192 YDAALAAL 199 (200)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhh
Confidence 88888776
No 35
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=99.96 E-value=3.3e-29 Score=208.49 Aligned_cols=149 Identities=17% Similarity=0.264 Sum_probs=125.6
Q ss_pred ccCcCCCCCCCCCCeEEeeecCCCc-eeEeccc-ccCCcEEEEEEecCCCCCChHH-HHHHHHHHHHHHHhcCcE-EEEE
Q 024201 73 SVEIPPLVGNTAPDFAAEAVFDQEF-INVKLSD-YIGKKYVILFFYPLDFTFVCPT-EITAFSDRYTEFEKLNTE-ILGV 148 (271)
Q Consensus 73 ~~~~~~~~G~~~Pdf~l~~~~~~~g-~~v~Lsd-~~gkk~vvL~F~~~t~Cp~C~~-~l~~L~~~~~~~~~~gv~-vv~V 148 (271)
...+.+++|+++|+|+++++. .+| +.++|++ ++|| ++||+||+++|||+|+. |+|.|++++++|+++|++ ||+|
T Consensus 21 ~~~~~l~vG~~aPdf~l~~~~-~~G~~~v~L~d~~~Gk-~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~I 98 (184)
T 3uma_A 21 QSMMTIAVGDKLPNATFKEKT-ADGPVEVTTELLFKGK-RVVLFAVPGAFTPTCSLNHLPGYLENRDAILARGVDDIAVV 98 (184)
T ss_dssp CCSSCCCTTCBCCCCEEEEEE-TTEEEEEEHHHHHTTS-EEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEE
T ss_pred cccCcCCCCCCCCCcEeeccc-CCCceEEeHHHHhCCC-CEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcCCCEEEEE
Confidence 334558999999999999542 267 8999999 8998 77777777999999999 899999999999999999 9999
Q ss_pred eCCCHHHHHHHHHHhhhcCCCCCcc--cceEEcCChHHHHHhCCccCC--CCc---cceEEEEEcCCCcEEEEEeccCCC
Q 024201 149 STDSVFSHLAWVQTDRKSGGLGDLK--YPLIADITKSISKSYGVLIPD--QGI---ALRGLFIIDKEGVIQHSTINNLAI 221 (271)
Q Consensus 149 S~d~~~~~~~~~~~~~~~~~~~~~~--f~~l~D~~~~~~~~ygv~~~~--~g~---~~P~~~lID~~G~V~~~~~~~~~~ 221 (271)
|.|+++.+++|.+++ +++ |++++|.+++++++||+.... .|+ ..|++|||| ||+|++.++++...
T Consensus 99 s~d~~~~~~~f~~~~-------~~~~~fp~l~D~~~~va~~yGv~~~~~~~g~g~~~~r~tfiId-dG~I~~~~~~~~~g 170 (184)
T 3uma_A 99 AVNDLHVMGAWATHS-------GGMGKIHFLSDWNAAFTKAIGMEIDLSAGTLGIRSKRYSMLVE-DGVVKALNIEESPG 170 (184)
T ss_dssp ESSCHHHHHHHHHHH-------TCTTTSEEEECTTCHHHHHTTCEEEEGGGTCEEEECCEEEEEE-TTEEEEEEECSSTT
T ss_pred ECCCHHHHHHHHHHh-------CCCCceEEEEcCchHHHHHcCCceeccccCCcccceeEEEEEC-CCEEEEEEEeCCCC
Confidence 999999999999998 667 999999999999999998542 232 468899997 99999999886543
Q ss_pred C---CCHHHHHHH
Q 024201 222 G---RSVDETLRT 231 (271)
Q Consensus 222 ~---~~~~e~l~~ 231 (271)
. ..++++|+.
T Consensus 171 ~~~~~~~~~vL~~ 183 (184)
T 3uma_A 171 QATASGAAAMLEL 183 (184)
T ss_dssp CCSTTSHHHHHHH
T ss_pred CCcCCCHHHHHhh
Confidence 2 456776664
No 36
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=99.96 E-value=1.8e-28 Score=204.10 Aligned_cols=161 Identities=17% Similarity=0.221 Sum_probs=136.2
Q ss_pred CCCCCCCCCeEEeeecCCCceeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeC-------
Q 024201 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVST------- 150 (271)
Q Consensus 78 ~~~G~~~Pdf~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~------- 150 (271)
+.+|+.+|+|++.. +.+|+.++|++++||+++||+|| ++||++|+.+++.|.+++++|+++|+.+|+|++
T Consensus 18 ~~~g~~~p~f~l~~--~~~G~~~~l~~~~gk~~vlv~F~-a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~ 94 (196)
T 2ywi_A 18 FPLGKQAPPFALTN--VIDGNVVRLEDVKSDAATVIMFI-CNHCPFVKHVQHELVRLANDYMPKGVSFVAINSNDAEQYP 94 (196)
T ss_dssp CCTTCBCCCCEEEE--TTTCCEEEHHHHCCSSEEEEEEC-CSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECSCTTTCG
T ss_pred CCcCCcCCceeeee--cCCCCEEeHHHhCCCCeEEEEEe-CCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCcccccc
Confidence 78999999999961 45677999999999856999999 999999999999999999999998999999999
Q ss_pred -CCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccC-----CCCCC
Q 024201 151 -DSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNL-----AIGRS 224 (271)
Q Consensus 151 -d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~-----~~~~~ 224 (271)
|+.+..++|.+.+ +++|+++.|.+.++++.|++. .+|++||||++|+|+++..... ....+
T Consensus 95 ~d~~~~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~v~------~~P~~~lid~~G~i~~~~~~~~~~~~~~g~~~ 161 (196)
T 2ywi_A 95 EDSPENMKKVAEEL-------GYPFPYLYDETQEVAKAYDAA------CTPDFYIFDRDLKCVYRGQLDDSRPNNGIPVT 161 (196)
T ss_dssp GGSHHHHHHHHHHH-------TCCSCEEECSSCHHHHHHTCC------EESEEEEEETTCBEEEEECSSSCCTTTCCCCC
T ss_pred ccCHHHHHHHHHHc-------CCCceEEECCchHHHHHhCCC------CCCeEEEEcCCCeEEEccccCcccccccCccC
Confidence 5677888899888 789999999999999999998 8999999999999999854321 11225
Q ss_pred HHHHHHHHHHHHHhh-----hCCCcccCCCCCCCC
Q 024201 225 VDETLRTLQALQYVQ-----ENPDEVCPAGWKPGD 254 (271)
Q Consensus 225 ~~e~l~~l~~l~~~~-----~~~~~~~p~~~~~~~ 254 (271)
.+++.+.|+.+...+ ..+..+|+++|++++
T Consensus 162 ~~~l~~~i~~ll~~~~~~~~~~~~~gC~~~~~~~~ 196 (196)
T 2ywi_A 162 GESIRAALDALLEGRPVPEKQKPSIGCSIKWKPSA 196 (196)
T ss_dssp CHHHHHHHHHHHHTCCCCSCCCCCEEEECCCCCCC
T ss_pred HHHHHHHHHHHHcCCCCCCCCCCCCceeeeeccCC
Confidence 678888888775332 345889999999875
No 37
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=99.96 E-value=1.2e-28 Score=201.83 Aligned_cols=145 Identities=18% Similarity=0.252 Sum_probs=122.9
Q ss_pred CCCCCCCCCCeEEeeecCCCceeEecccc-cCCcEEEEEEecCCCCCChHH-HHHHHHHHHHHHHhcCc-EEEEEeCCCH
Q 024201 77 PPLVGNTAPDFAAEAVFDQEFINVKLSDY-IGKKYVILFFYPLDFTFVCPT-EITAFSDRYTEFEKLNT-EILGVSTDSV 153 (271)
Q Consensus 77 ~~~~G~~~Pdf~l~~~~~~~g~~v~Lsd~-~gkk~vvL~F~~~t~Cp~C~~-~l~~L~~~~~~~~~~gv-~vv~VS~d~~ 153 (271)
.+++|+++|+|+++ .+.+|+.++|+++ +|| ++||+||+++|||+|+. ++|.|++++++|+++|+ +||+||.|++
T Consensus 2 ~l~~G~~aP~f~l~--~~~~G~~v~L~d~~~Gk-~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~~ 78 (167)
T 2wfc_A 2 PIKEGDKLPAVTVF--GATPNDKVNMAELFAGK-KGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGKGVDIIACMAVNDS 78 (167)
T ss_dssp CCCTTCBCCCCEEE--SSSTTCEEEHHHHTTTS-EEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHTTCCEEEEEESSCH
T ss_pred CCCCCCcCCCcEee--cCCCCcEEeHHHHhCCC-cEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCH
Confidence 47899999999997 2567789999999 998 89999988999999999 99999999999999999 9999999999
Q ss_pred HHHHHHHHHhhhcCCCCCcc--cceEEcCChHHHHHhCCccCCC---C--ccceEEEEEcCCCcEEEEEeccCCCCCC--
Q 024201 154 FSHLAWVQTDRKSGGLGDLK--YPLIADITKSISKSYGVLIPDQ---G--IALRGLFIIDKEGVIQHSTINNLAIGRS-- 224 (271)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~--f~~l~D~~~~~~~~ygv~~~~~---g--~~~P~~~lID~~G~V~~~~~~~~~~~~~-- 224 (271)
+.+++|.+++ +++ |+++.|.+++++++||+..... | ...|++||| ++|+|++.++++...+..
T Consensus 79 ~~~~~~~~~~-------~~~~~fp~l~D~~~~~~~~~gv~~~~~~~~g~~~~~p~t~lI-~~G~I~~~~~~~~~~~~~~~ 150 (167)
T 2wfc_A 79 FVMDAWGKAH-------GADDKVQMLADPGGAFTKAVDMELDLSAVLGNVRSKRYSLVI-EDGVVTKVNVEPDGKGLTCS 150 (167)
T ss_dssp HHHHHHHHHT-------TCTTTSEEEECTTSHHHHHTTCEECCHHHHSSCEECCEEEEE-ETTEEEEEEECTTSSSSSTT
T ss_pred HHHHHHHHhc-------CCCcceEEEECCCCcHHHHcCCccccccccCcccceEEEEEE-eCCEEEEEEecCCCCcceec
Confidence 9999999988 666 9999999999999999974310 1 135999999 999999999887655443
Q ss_pred -HHHHHHHH
Q 024201 225 -VDETLRTL 232 (271)
Q Consensus 225 -~~e~l~~l 232 (271)
++.+++.|
T Consensus 151 ~~~~~~~~~ 159 (167)
T 2wfc_A 151 LAPNILSQL 159 (167)
T ss_dssp SHHHHHHHH
T ss_pred cHHHHHHHh
Confidence 45444443
No 38
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=99.96 E-value=4e-28 Score=207.10 Aligned_cols=151 Identities=18% Similarity=0.193 Sum_probs=131.0
Q ss_pred eecccCcCCCCCCCCCCeEEeeecCCCceeEecccccCCcEEEEEEecCCCCCChH-----HHHHHHHHHHHHHHhcCcE
Q 024201 70 VKASVEIPPLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCP-----TEITAFSDRYTEFEKLNTE 144 (271)
Q Consensus 70 ~~~~~~~~~~~G~~~Pdf~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~-----~~l~~L~~~~~~~~~~gv~ 144 (271)
....+.+ +.+|+++|+|+|. +.+|+.++|++++|| ++||+||++.|||+|. .+++.|.++ | +|++
T Consensus 15 ~~~~g~~-l~vG~~APdFtL~---d~~G~~vsLsd~~Gk-~vVL~F~ps~~cp~C~~~~~~~El~~~~~~---~--~gv~ 84 (224)
T 3keb_A 15 LPVIGDF-PRKGDYLPSFMLV---DDQKHDAALESFSHT-PKLIVTLLSVDEDEHAGLLLLRETRRFLDS---W--PHLK 84 (224)
T ss_dssp EECBSCC-CCTTCBCCCCEEE---ETTSCEEEGGGGTTC-CEEEEECSCTTCSTTTSHHHHHHHHHHHTT---C--TTSE
T ss_pred eeeecCc-CCCCCCCCCeEEE---CCCCCEEeHHHhCCC-cEEEEEEeCCCCCCCCCCccHHHHHHHHHH---c--CCCE
Confidence 3445555 8999999999998 667889999999998 8999999877799999 899988887 4 6999
Q ss_pred EEEEeCCCHHHHHHHHHHhhhcCCCCCc-ccceEEcC-ChHHHHHhCCccCC---CCccceEEEEEcCCCcEEEEEeccC
Q 024201 145 ILGVSTDSVFSHLAWVQTDRKSGGLGDL-KYPLIADI-TKSISKSYGVLIPD---QGIALRGLFIIDKEGVIQHSTINNL 219 (271)
Q Consensus 145 vv~VS~d~~~~~~~~~~~~~~~~~~~~~-~f~~l~D~-~~~~~~~ygv~~~~---~g~~~P~~~lID~~G~V~~~~~~~~ 219 (271)
||+||.|+++.+++|.+.+ ++ +|++++|. ++++++.||+.... .|+..|++||||++|+|++.++...
T Consensus 85 VvgIS~Ds~~~~~~f~~~~-------gl~~fplLsD~~~~~vak~yGv~~~~~~~~G~~~p~tfvID~dG~I~~~~~~~~ 157 (224)
T 3keb_A 85 LIVITVDSPSSLARARHEH-------GLPNIALLSTLRGRDFHKRYGVLITEYPLSGYTSPAIILADAANVVHYSERLAN 157 (224)
T ss_dssp EEEEESSCHHHHHHHHHHH-------CCTTCEEEESTTCTTHHHHTTCBCCSTTSTTCBCCEEEEECTTCBEEEEEECSB
T ss_pred EEEEECCCHHHHHHHHHHc-------CCCCceEEEcCCchHHHHHhCCccccccccCCccCEEEEEcCCCEEEEEEecCC
Confidence 9999999999999999998 67 69999998 69999999998654 4667899999999999999988654
Q ss_pred CC-CCCHHHHHHHHHHHHH
Q 024201 220 AI-GRSVDETLRTLQALQY 237 (271)
Q Consensus 220 ~~-~~~~~e~l~~l~~l~~ 237 (271)
.. ..+.+++++.|+.++.
T Consensus 158 ~~~~pd~~evl~~L~~l~~ 176 (224)
T 3keb_A 158 TRDFFDFDAIEKLLQEGEQ 176 (224)
T ss_dssp TTCCCCHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHhhh
Confidence 43 4579999999998853
No 39
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.96 E-value=3.9e-28 Score=201.12 Aligned_cols=158 Identities=16% Similarity=0.262 Sum_probs=132.6
Q ss_pred CCCCCCCCCeEEeeecCCCceeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeC-------
Q 024201 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVST------- 150 (271)
Q Consensus 78 ~~~G~~~Pdf~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~------- 150 (271)
+.+|+.+|+|++. +.+|+.++|++++|| ++||+|| ++||++|+.+++.|.+++++|+++ +.||+|+.
T Consensus 7 ~~~g~~~p~f~l~---~~~G~~~~l~~~~gk-~vlv~F~-a~~C~~C~~~~~~l~~l~~~~~~~-~~~v~v~~d~~~~~~ 80 (188)
T 2cvb_A 7 LPLESPLIDAELP---DPRGGRYRLSQFHEP-LLAVVFM-CNHCPYVKGSIGELVALAERYRGK-VAFVGINANDYEKYP 80 (188)
T ss_dssp CCTTCBCCCCEEE---CTTSCEEEGGGCCSS-EEEEEEE-CSSCHHHHTTHHHHHHHHHHTTTT-EEEEEEECCCTTTCG
T ss_pred CCCCCCCCCceee---cCCCCEEeHHHhCCC-EEEEEEE-CCCCccHHHHHHHHHHHHHHhhcC-eEEEEEEcCcccccc
Confidence 7899999999998 678889999999997 9999999 999999999999999999999987 99999999
Q ss_pred -CCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccC----CCCCCH
Q 024201 151 -DSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNL----AIGRSV 225 (271)
Q Consensus 151 -d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~----~~~~~~ 225 (271)
|+.+..++|.+.+ +++|+++.|.+.++++.||+. .+|++||||++|+|++...... ....+.
T Consensus 81 ~d~~~~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~v~------~~P~~~lid~~G~i~~~g~~~~~~~~~g~~~~ 147 (188)
T 2cvb_A 81 EDAPEKMAAFAEEH-------GIFFPYLLDETQEVAKAYRAL------RTPEVFLFDERRLLRYHGRVNDNPKDPSKVQS 147 (188)
T ss_dssp GGSHHHHHHHHHHH-------TCCSCEEECSSSHHHHHTTCC------EESEEEEECTTCBEEEEECSSSCTTCGGGCCC
T ss_pred ccCHHHHHHHHHHh-------CCCceEEECCcchHHHHcCCC------CCCeEEEECCCCcEEEEEecCCccccccccCH
Confidence 5667788898888 789999999999999999998 8999999999999999822110 011134
Q ss_pred HHHHHHHHHHHHh-----hhCCCcccCCCCCCCC
Q 024201 226 DETLRTLQALQYV-----QENPDEVCPAGWKPGD 254 (271)
Q Consensus 226 ~e~l~~l~~l~~~-----~~~~~~~~p~~~~~~~ 254 (271)
+++.+.|+.+... ...+..+|+++|+||+
T Consensus 148 ~~l~~~i~~ll~~~~~~~~~~~~~gc~~~~~~~~ 181 (188)
T 2cvb_A 148 HDLEAAIEALLRGEEPPLKEAPAIGCTIKWRPGN 181 (188)
T ss_dssp CHHHHHHHHHHTTCCCCSSCCCCCSEECCCCTTC
T ss_pred HHHHHHHHHHHcCCCCCcccCCCCceEEEecCCC
Confidence 6677777766432 2344789999999877
No 40
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=99.96 E-value=3.5e-28 Score=200.13 Aligned_cols=148 Identities=22% Similarity=0.329 Sum_probs=127.1
Q ss_pred CcCCCCCCCCCCeEEeeecC-------CCceeEecccc-cCCcEEEEEEecCCCCCChHH-HHHHHHHHHHHHHhcCc-E
Q 024201 75 EIPPLVGNTAPDFAAEAVFD-------QEFINVKLSDY-IGKKYVILFFYPLDFTFVCPT-EITAFSDRYTEFEKLNT-E 144 (271)
Q Consensus 75 ~~~~~~G~~~Pdf~l~~~~~-------~~g~~v~Lsd~-~gkk~vvL~F~~~t~Cp~C~~-~l~~L~~~~~~~~~~gv-~ 144 (271)
.| +.+||++|++++..+.+ ...++++|+++ +|| ++||+|||++|||+|.. |++.|++.+++|+++|+ +
T Consensus 8 ~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~vsLsd~~~Gk-~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~~~g~d~ 85 (176)
T 4f82_A 8 HM-IQVGDALPDAQLFEFIDDAREGCTLGPNACSVRDQVAGK-RVVIFGLPGAFTPTCSAQHVPGYVEHAEQLRAAGIDE 85 (176)
T ss_dssp CC-CCTTCBCCCCEEEEEECSCCTTCCSEEEEEEHHHHHTTC-EEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCE
T ss_pred hh-hhcCCcCCceEEEEecccccccccCCceEEeHHHHhCCC-eEEEEEEcCCCCCCCCHHHHHHHHHHHHHHHhCCCCE
Confidence 35 88999999999998866 45689999997 998 78899999999999999 99999999999999999 9
Q ss_pred EEEEeCCCHHHHHHHHHHhhhcCCCCCcc--cceEEcCChHHHHHhCCccCC--CCc---cceEEEEEcCCCcEEEEEec
Q 024201 145 ILGVSTDSVFSHLAWVQTDRKSGGLGDLK--YPLIADITKSISKSYGVLIPD--QGI---ALRGLFIIDKEGVIQHSTIN 217 (271)
Q Consensus 145 vv~VS~d~~~~~~~~~~~~~~~~~~~~~~--f~~l~D~~~~~~~~ygv~~~~--~g~---~~P~~~lID~~G~V~~~~~~ 217 (271)
||+||+|+++.+++|.+++ +++ |++++|.+.+++++||+..+. .|+ ..|.+||| +||+|++.+++
T Consensus 86 VigIS~D~~~~~~~f~~~~-------~l~~~f~lLsD~~~~va~ayGv~~~~~~~G~g~~s~R~tfII-~dG~I~~~~~~ 157 (176)
T 4f82_A 86 IWCVSVNDAFVMGAWGRDL-------HTAGKVRMMADGSAAFTHALGLTQDLSARGMGIRSLRYAMVI-DGGVVKTLAVE 157 (176)
T ss_dssp EEEEESSCHHHHHHHHHHT-------TCTTTSEEEECTTCHHHHHHTCEEECGGGTCCEEECCEEEEE-ETTEEEEEEEC
T ss_pred EEEEeCCCHHHHHHHHHHh-------CCCCCceEEEcCchHHHHHhCCCccccccCCCcccccEEEEE-cCCEEEEEEEc
Confidence 9999999999999999998 555 999999999999999998654 342 35999999 99999999987
Q ss_pred cCC--CCCCHHHHHHHH
Q 024201 218 NLA--IGRSVDETLRTL 232 (271)
Q Consensus 218 ~~~--~~~~~~e~l~~l 232 (271)
+.. ...+++++|+.|
T Consensus 158 ~~~~~~~~~a~~vL~~L 174 (176)
T 4f82_A 158 APGKFEVSDAASVLATL 174 (176)
T ss_dssp CTTCCSSSSHHHHHHTC
T ss_pred CCCCcchhhHHHHHHHh
Confidence 632 223566666654
No 41
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=99.95 E-value=2.1e-27 Score=204.91 Aligned_cols=148 Identities=24% Similarity=0.396 Sum_probs=129.2
Q ss_pred CCCCCCCCCCeEEeeecCCCce--eEeccc-ccCCcEEEEEEecCCCCCChH-HHHHHHHHHHHHHHhcCc-EEEEEeCC
Q 024201 77 PPLVGNTAPDFAAEAVFDQEFI--NVKLSD-YIGKKYVILFFYPLDFTFVCP-TEITAFSDRYTEFEKLNT-EILGVSTD 151 (271)
Q Consensus 77 ~~~~G~~~Pdf~l~~~~~~~g~--~v~Lsd-~~gkk~vvL~F~~~t~Cp~C~-~~l~~L~~~~~~~~~~gv-~vv~VS~d 151 (271)
.+.+|+++|+|++.++. +|+ .++|++ ++|| ++||+||+++|||+|+ .++|.|++++++|+++|+ +||+||.|
T Consensus 2 ~~~~G~~aP~f~l~~~~--~g~~~~v~l~~~~~gk-~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~~~~~vv~is~d 78 (241)
T 1nm3_A 2 SSMEGKKVPQVTFRTRQ--GDKWVDVTTSELFDNK-TVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYGVDDILVVSVN 78 (241)
T ss_dssp -CCTTSBCCCCEEEEEE--TTEEEEEEHHHHHTTS-EEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESS
T ss_pred CccCCCCCCCeEEEccc--CCCceeecHHHHhCCC-eEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEcC
Confidence 37799999999998542 455 899999 8998 8999999999999999 999999999999999999 99999999
Q ss_pred CHHHHHHHHHHhhhcCCCCCcc-cceEEcCChHHHHHhCCccCC--CCc---cceEEEEEcCCCcEEEEEeccCCCC---
Q 024201 152 SVFSHLAWVQTDRKSGGLGDLK-YPLIADITKSISKSYGVLIPD--QGI---ALRGLFIIDKEGVIQHSTINNLAIG--- 222 (271)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~-f~~l~D~~~~~~~~ygv~~~~--~g~---~~P~~~lID~~G~V~~~~~~~~~~~--- 222 (271)
+.+.+++|.+++ ++. |+++.|.+++++++||+.... .|+ ..|++||| ++|+|++.+.+....+
T Consensus 79 ~~~~~~~~~~~~-------~~~~~~~l~D~~~~~~~~~gv~~~~~~~g~~~~~~p~t~li-~~G~i~~~~~~~~~~~~~~ 150 (241)
T 1nm3_A 79 DTFVMNAWKEDE-------KSENISFIPDGNGEFTEGMGMLVGKEDLGFGKRSWRYSMLV-KNGVVEKMFIEPNEPGDPF 150 (241)
T ss_dssp CHHHHHHHHHHT-------TCTTSEEEECTTSHHHHHTTCEEECTTTTCCEEECCEEEEE-ETTEEEEEEECCSCSSCCC
T ss_pred CHHHHHHHHHhc-------CCCceEEEECCCcHHHHHhCceeecccccCcccceeEEEEE-ECCEEEEEEEeccCCCccc
Confidence 999999999987 565 999999999999999997533 233 46999999 9999999998876655
Q ss_pred --CCHHHHHHHHHHH
Q 024201 223 --RSVDETLRTLQAL 235 (271)
Q Consensus 223 --~~~~e~l~~l~~l 235 (271)
.+++++++.|+..
T Consensus 151 ~~~~~~~il~~l~~~ 165 (241)
T 1nm3_A 151 KVSDADTMLKYLAPQ 165 (241)
T ss_dssp SSSSHHHHHHHHCTT
T ss_pred eecCHHHHHHHhhhh
Confidence 5899999988754
No 42
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=99.95 E-value=9.2e-28 Score=216.14 Aligned_cols=168 Identities=24% Similarity=0.375 Sum_probs=142.9
Q ss_pred CCCCCeEEeeecCCCceeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHH
Q 024201 82 NTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQ 161 (271)
Q Consensus 82 ~~~Pdf~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~ 161 (271)
.++|+|+|+ +.+|++++|+||+|| ++||+|||+.|||+|..|++.|++. ..+|++||+||.|+++.+++|.+
T Consensus 2 ak~p~F~l~---~~~G~~~~Lsd~~Gk-~vvl~F~p~~~tp~C~~e~~~~~~~----~~~~~~v~gis~D~~~~~~~f~~ 73 (322)
T 4eo3_A 2 ARVKHFELL---TDEGKTFTHVDLYGK-YTILFFFPKAGTSGSTREAVEFSRE----NFEKAQVVGISRDSVEALKRFKE 73 (322)
T ss_dssp CBCCCCEEE---ETTSCEEEGGGTTTS-EEEEEECSSTTSHHHHHHHHHHHHS----CCTTEEEEEEESCCHHHHHHHHH
T ss_pred CCCCCcEEE---CCCcCEEeHHHhCCC-eEEEEEECCCCCCCCHHHHHHHHHH----hhCCCEEEEEeCCCHHHHHHHHH
Confidence 378999998 788889999999998 8999999999999999999888642 33589999999999999999999
Q ss_pred HhhhcCCCCCcccceEEcCChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHHHHhhhC
Q 024201 162 TDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQYVQEN 241 (271)
Q Consensus 162 ~~~~~~~~~~~~f~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l~~~~~~ 241 (271)
++ +++||+++|.+++++++||+.. .|...|++||||++|+|++++ .+..+..+++|+|+.|++++. ++.
T Consensus 74 ~~-------~l~fp~l~D~~~~v~~~ygv~~--~~~~~r~tfiId~~G~i~~~~-~~v~~~~h~~~~l~~~~~~~~-~~~ 142 (322)
T 4eo3_A 74 KN-------DLKVTLLSDPEGILHEFFNVLE--NGKTVRSTFLIDRWGFVRKEW-RRVKVEGHVQEVKEALDRLIE-EDL 142 (322)
T ss_dssp HH-------TCCSEEEECTTCHHHHHTTCEE--TTEECCEEEEECTTSBEEEEE-ESCCSTTHHHHHHHHHHHHHH-HHT
T ss_pred hh-------CCceEEEEcCchHHHHhcCCCC--CCcCccEEEEECCCCEEEEEE-eCCCccccHHHHHHHHhhhch-hhh
Confidence 98 8899999999999999999973 244689999999999999997 456788899999999999974 444
Q ss_pred CCcccCCCCCCCCCCCCCCchhhHHHhhh
Q 024201 242 PDEVCPAGWKPGDKSMKPDPKLSKEYFAA 270 (271)
Q Consensus 242 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 270 (271)
+...-++|+---..|.++ +++++.+..
T Consensus 143 -~~~~~I~~RRSiR~F~~~-~V~~e~l~~ 169 (322)
T 4eo3_A 143 -SLNKHIEWRRARRALKKD-RVPREELEL 169 (322)
T ss_dssp -SCCHHHHHCCCCCCBCCC-CCCHHHHHH
T ss_pred -HHHHHHHhhhccCCcCcc-ccCHHHHHH
Confidence 566677777777788744 577776554
No 43
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=99.95 E-value=6.1e-28 Score=195.01 Aligned_cols=144 Identities=22% Similarity=0.407 Sum_probs=121.0
Q ss_pred CCCCCCCCCeEEeeecCCCceeEecccccCC-cEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHH
Q 024201 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGK-KYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSH 156 (271)
Q Consensus 78 ~~~G~~~Pdf~l~~~~~~~g~~v~Lsd~~gk-k~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~ 156 (271)
+.+|+.+|+|++. +.+|+.++|++++|| +++||+||+++|||+|+.+++.|++++++|+++| +||+|+.|+++.+
T Consensus 7 ~~~G~~~P~f~l~---~~~G~~v~l~~~~gk~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~-~vv~is~d~~~~~ 82 (159)
T 2a4v_A 7 LEIGDPIPDLSLL---NEDNDSISLKKITENNRVVVFFVYPRASTPGSTRQASGFRDNYQELKEYA-AVFGLSADSVTSQ 82 (159)
T ss_dssp CCTTCBCCSCEEE---CTTSCEEEHHHHHHHCSEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTC-EEEEEESCCHHHH
T ss_pred CCCCCCCCCeEEE---CCCCCEEeHHHHhCCCCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCC-cEEEEeCCCHHHH
Confidence 7899999999998 778889999999986 3789999889999999999999999999999989 9999999999999
Q ss_pred HHHHHHhhhcCCCCCcccceEEcCChHHHHHhCCccCC-CCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHH
Q 024201 157 LAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPD-QGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 157 ~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ygv~~~~-~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l 235 (271)
++|.+.+ +++|+++.|.++++++.||+.... .| ..|++||| ++|+|++.+.+... ..+.+++++.|+++
T Consensus 83 ~~~~~~~-------~~~~~~l~D~~~~~~~~~gv~~~p~~g-~~~~~~li-~~G~i~~~~~g~~~-~~~~~~~~~~l~~~ 152 (159)
T 2a4v_A 83 KKFQSKQ-------NLPYHLLSDPKREFIGLLGAKKTPLSG-SIRSHFIF-VDGKLKFKRVKISP-EVSVNDAKKEVLEV 152 (159)
T ss_dssp HHHHHHH-------TCSSEEEECTTCHHHHHHTCBSSSSSC-BCCEEEEE-ETTEEEEEEESCCH-HHHHHHHHHHHHHH
T ss_pred HHHHHHh-------CCCceEEECCccHHHHHhCCcccccCC-ccceEEEE-cCCEEEEEEccCCc-cccHHHHHHHHHHH
Confidence 9999988 789999999999999999998432 22 35699999 99999999864321 22345555555443
No 44
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=99.95 E-value=1.2e-27 Score=196.34 Aligned_cols=146 Identities=20% Similarity=0.239 Sum_probs=121.4
Q ss_pred CCCCCCCCCCeEEeeecCCCceeEecccc-cCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcE-EEEEeCCCHH
Q 024201 77 PPLVGNTAPDFAAEAVFDQEFINVKLSDY-IGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTE-ILGVSTDSVF 154 (271)
Q Consensus 77 ~~~~G~~~Pdf~l~~~~~~~g~~v~Lsd~-~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~-vv~VS~d~~~ 154 (271)
++++|+++|+|++. .+..++.++|+++ +|| ++||+|||+.|||.|..|++.|++.+++|+++|++ |++||+|+++
T Consensus 13 ~~~vGd~aPdf~l~--~~g~~~~v~L~d~~~gk-~vVL~fyP~~fTp~Ct~e~~~f~~~~~ef~~~gv~~VigIS~D~~~ 89 (171)
T 2xhf_A 13 PIKVGDIIPDVLVY--EDVPSKSFPIHDVFRGR-KGILFSVVGAFVPGSNNHIPEYLSLYDKFKEEGYHTIACIAVNDPF 89 (171)
T ss_dssp CCCTTCBCCCCEEE--CSSTTCEEETHHHHTTS-EEEEEECSCTTCTTTTSSHHHHHHTHHHHHHTTCCEEEEEESSCHH
T ss_pred cccCcCCCCCeEEe--cCCCCcEEEhHHHhCCC-eEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHH
Confidence 48999999999998 2222379999995 888 89999999999999999999999999999999996 9999999999
Q ss_pred HHHHHHHHhhhcCCCCCc--ccceEEcCChHHHHHhCCccCCC----C-ccceEEEEEcCCCcEEEEEeccCCC---CCC
Q 024201 155 SHLAWVQTDRKSGGLGDL--KYPLIADITKSISKSYGVLIPDQ----G-IALRGLFIIDKEGVIQHSTINNLAI---GRS 224 (271)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~--~f~~l~D~~~~~~~~ygv~~~~~----g-~~~P~~~lID~~G~V~~~~~~~~~~---~~~ 224 (271)
.+++|.+.+ ++ +|++++|.+.+++++||+..+.. | ...|.+|||| ||+|++.++.+... ..+
T Consensus 90 ~~~~w~~~~-------~~~~~f~lLSD~~~~~a~ayGv~~~~~~~g~g~~~~R~tfvId-dG~V~~~~v~~~~~~~~~s~ 161 (171)
T 2xhf_A 90 VMAAWGKTV-------DPEHKIRMLADMHGEFTRALGTELDSSKMLGNNRSRRYAMLID-DNKIRSVSTEPDITGLACLL 161 (171)
T ss_dssp HHHHHHHHH-------CTTCCSEEEECTTSHHHHHHTCBCCCHHHHSSCCBCCEEEEEE-TTEEEEEEETTSCSHHHHHH
T ss_pred HHHHHHHhc-------CCCCCeEEEEeCCchHHHHhCCceeccccCCCcceEEEEEEEe-CCEEEEEEEeCCCCcccCCC
Confidence 999999998 44 89999999999999999986542 2 2578999999 99999999876543 223
Q ss_pred HHHHHHHHH
Q 024201 225 VDETLRTLQ 233 (271)
Q Consensus 225 ~~e~l~~l~ 233 (271)
.+++|+.++
T Consensus 162 a~~vL~~~~ 170 (171)
T 2xhf_A 162 SIQRQKENK 170 (171)
T ss_dssp HHHHC----
T ss_pred HHHHHHHhc
Confidence 566665553
No 45
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=99.95 E-value=3e-27 Score=192.18 Aligned_cols=145 Identities=21% Similarity=0.393 Sum_probs=127.3
Q ss_pred CCCCCCCCCeEEeeecCCCceeEecccccCCcEEEEEEecCCC-CCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHH
Q 024201 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDF-TFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSH 156 (271)
Q Consensus 78 ~~~G~~~Pdf~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~-Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~ 156 (271)
+.+|+++|+|++. +.+|+.+++++++|| ++||+|| ++| |++|+.+++.|++++++| +++++|+|+.|+++..
T Consensus 18 ~~~G~~~p~f~l~---~~~G~~~~l~~~~gk-~~vl~F~-~~~~C~~C~~~~~~l~~l~~~~--~~~~vv~is~d~~~~~ 90 (167)
T 2jsy_A 18 VKVGDQAPDFTVL---TNSLEEKSLADMKGK-VTIISVI-PSIDTGVCDAQTRRFNEEAAKL--GDVNVYTISADLPFAQ 90 (167)
T ss_dssp CCTTSCCCCCEEE---BTTCCEEEHHHHTTS-CEEEEEC-SCSTTSHHHHTHHHHHHHHHHH--SSCEEEEEECSSGGGT
T ss_pred cCCCCcCCceEEE---CCCCCEeeHHHhCCC-eEEEEEe-cCCCCCchHHHHHHHHHHHHHc--CCCEEEEEECCCHHHH
Confidence 8899999999998 778889999999998 8999999 787 999999999999999999 6899999999998888
Q ss_pred HHHHHHhhhcCCCCCc-ccceEEc-CChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccC-CCCCCHHHHHHHHH
Q 024201 157 LAWVQTDRKSGGLGDL-KYPLIAD-ITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNL-AIGRSVDETLRTLQ 233 (271)
Q Consensus 157 ~~~~~~~~~~~~~~~~-~f~~l~D-~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~-~~~~~~~e~l~~l~ 233 (271)
++|.+++ ++ +|+++.| .++++++.||+.....|+..|++||||++|+|++.+.+.. ....+.+++++.|+
T Consensus 91 ~~~~~~~-------~~~~~~~~~d~~~~~~~~~~~v~~~~~g~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~~l~~~l~ 163 (167)
T 2jsy_A 91 ARWCGAN-------GIDKVETLSDHRDMSFGEAFGVYIKELRLLARSVFVLDENGKVVYAEYVSEATNHPNYEKPIEAAK 163 (167)
T ss_dssp SCCGGGS-------SCTTEEEEEGGGTCHHHHHTTCBBTTTCSBCCEEEEECTTSCEEEEEECSBTTSCCCSHHHHHHHH
T ss_pred HHHHHhc-------CCCCceEeeCCchhHHHHHhCCccccCCceeeEEEEEcCCCcEEEEEecCCcCCCCCHHHHHHHHH
Confidence 8888876 67 8999999 8899999999985545555799999999999999987643 33446799999998
Q ss_pred HHH
Q 024201 234 ALQ 236 (271)
Q Consensus 234 ~l~ 236 (271)
+|.
T Consensus 164 ~ll 166 (167)
T 2jsy_A 164 ALV 166 (167)
T ss_dssp HHH
T ss_pred Hhh
Confidence 764
No 46
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=99.95 E-value=2.9e-27 Score=196.17 Aligned_cols=148 Identities=16% Similarity=0.279 Sum_probs=125.6
Q ss_pred CCCCCCCCCeEEeeecC--------CCc----eeEeccc-ccCCcEEEEEEecCCCCCChH-HHHHHHHHHHHHH-HhcC
Q 024201 78 PLVGNTAPDFAAEAVFD--------QEF----INVKLSD-YIGKKYVILFFYPLDFTFVCP-TEITAFSDRYTEF-EKLN 142 (271)
Q Consensus 78 ~~~G~~~Pdf~l~~~~~--------~~g----~~v~Lsd-~~gkk~vvL~F~~~t~Cp~C~-~~l~~L~~~~~~~-~~~g 142 (271)
+++|+++|+|++.+... .+| +.++|++ ++|| ++||+|||+.|||+|. .|++.|++.+++| +++|
T Consensus 1 l~vGd~aPdf~l~~~~~~~~~~~~~~~G~~~~~~v~l~d~~~gk-~vVL~fyP~~fTp~Ct~~e~~~f~~~~~~f~~~~g 79 (182)
T 1xiy_A 1 MKENDLIPNVKVMIDVRNMNNISDTDGSPNDFTSIDTHELFNNK-KILLISLPGAFTPTCSTKMIPGYEEEYDYFIKENN 79 (182)
T ss_dssp CCTTCBCCCCEEEEEHHHHTC--------CCEEEEEHHHHSTTC-EEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTSC
T ss_pred CCCCCCCCCeEEEcccccccccccccCCCccceeEeHHHHhCCC-cEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHhCC
Confidence 46899999999985311 145 7999999 6888 8999999999999999 9999999999999 9999
Q ss_pred cE-EEEEeCCCHHHHHHHHHHhhhcCCCCCc-ccceEEcCChHHHHHhCCccCC--CCc---cceEEEEEcCCCcEEEEE
Q 024201 143 TE-ILGVSTDSVFSHLAWVQTDRKSGGLGDL-KYPLIADITKSISKSYGVLIPD--QGI---ALRGLFIIDKEGVIQHST 215 (271)
Q Consensus 143 v~-vv~VS~d~~~~~~~~~~~~~~~~~~~~~-~f~~l~D~~~~~~~~ygv~~~~--~g~---~~P~~~lID~~G~V~~~~ 215 (271)
++ |++||+|+++.+++|.+.+ ++ +|++++|.+.+++++||+..+. .|+ ..|.+|||| +|+|++.+
T Consensus 80 ~~~V~gvS~D~~~~~~~~~~~~-------~~~~f~lLsD~~~~~a~~yGv~~~~~~~G~g~~~~R~tfvId-dG~V~~~~ 151 (182)
T 1xiy_A 80 FDDIYCITNNDIYVLKSWFKSM-------DIKKIKYISDGNSSFTDSMNMLVDKSNFFMGMRPWRFVAIVE-NNILVKMF 151 (182)
T ss_dssp CSEEEEEESSCHHHHHHHHHHT-------TCCSSEEEECTTSHHHHHTTCEEECGGGTCCEEECCEEEEEE-TTEEEEEE
T ss_pred CcEEEEEeCCCHHHHHHHHHHc-------CCCCceEEEeCchHHHHHhCCceeccccCCCCceEEEEEEEc-CCEEEEEE
Confidence 95 9999999999999999988 45 6999999999999999998554 242 468999999 99999999
Q ss_pred eccCCC---------CCCHHHHHHHHHH
Q 024201 216 INNLAI---------GRSVDETLRTLQA 234 (271)
Q Consensus 216 ~~~~~~---------~~~~~e~l~~l~~ 234 (271)
+.+... ..+++++|+.|++
T Consensus 152 v~~~~~~~~~~~~~~~~~~~~vL~~L~~ 179 (182)
T 1xiy_A 152 QEKDKQHNIQTDPYDISTVNNVKEFLKN 179 (182)
T ss_dssp ECSSCCTTCSSCCCSTTSHHHHHHHHHC
T ss_pred EeCCcccccccCcccCCCHHHHHHHHHh
Confidence 876433 3689999988874
No 47
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=99.94 E-value=1.5e-26 Score=190.14 Aligned_cols=145 Identities=24% Similarity=0.423 Sum_probs=120.3
Q ss_pred ccCcCCCCCCCCCCeEEeeecCCCceeEecccccCCcEEEEEEecCCC-CCChHHHHHHHHHHHHHHHhcCcEEEEEeCC
Q 024201 73 SVEIPPLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDF-TFVCPTEITAFSDRYTEFEKLNTEILGVSTD 151 (271)
Q Consensus 73 ~~~~~~~~G~~~Pdf~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~-Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d 151 (271)
.+.. +.+|+++|+|++. +.+|+.+++++++|| ++||+|| ++| |++|+.+++.|.+++++ ++++||+|+.|
T Consensus 14 ~~~~-l~~G~~~P~f~l~---~~~G~~v~l~~~~gk-~vvl~F~-~t~~C~~C~~~~~~l~~l~~~---~~v~vv~Is~D 84 (175)
T 1xvq_A 14 VGEL-PAVGSPAPAFTLT---GGDLGVISSDQFRGK-SVLLNIF-PSVDTPVCATSVRTFDERAAA---SGATVLCVSKD 84 (175)
T ss_dssp SSCC-CCTTSBCCCCEEE---CTTSCEEEGGGGTTS-CEEEEEC-SCCCSSCCCHHHHHHHHHHHH---TTCEEEEEESS
T ss_pred cCCC-CCcCCcCCCeEEE---CCCCCEEeHHHcCCC-EEEEEEE-eCCCCchHHHHHHHHHHHHhh---cCCEEEEEECC
Confidence 3444 7899999999998 778889999999998 8999999 677 99999999999999988 68999999999
Q ss_pred CHHHHHHHHHHhhhcCCCCCc-ccceEEcCChHHHHHhCCccCC---CCccceEEEEEcCCCcEEEEEec-cCCCCCCHH
Q 024201 152 SVFSHLAWVQTDRKSGGLGDL-KYPLIADITKSISKSYGVLIPD---QGIALRGLFIIDKEGVIQHSTIN-NLAIGRSVD 226 (271)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~-~f~~l~D~~~~~~~~ygv~~~~---~g~~~P~~~lID~~G~V~~~~~~-~~~~~~~~~ 226 (271)
+++..++|.+++ ++ +|+++.|.+.++++.||+.... .|...|++||||++|+|++.+.+ +......++
T Consensus 85 ~~~~~~~~~~~~-------~~~~~~~l~D~~~~~~~~~gv~~~~~~~~g~~~p~~~lid~~G~I~~~~~g~~~~~~~~~~ 157 (175)
T 1xvq_A 85 LPFAQKRFCGAE-------GTENVMPASAFRDSFGEDYGVTIADGPMAGLLARAIVVIGADGNVAYTELVPEIAQEPNYE 157 (175)
T ss_dssp CHHHHTTCC-------------CEEEEECTTSSHHHHTTCBBCSSTTTTSBCSEEEEECTTSBEEEEEECSBTTCCCCHH
T ss_pred CHHHHHHHHHHc-------CCCCceEeeCCHHHHHHHhCCcccccccCCcccceEEEECCCCeEEEEEECCCcCCCCCHH
Confidence 988888888876 66 8999999999999999998432 34556999999999999999874 444455788
Q ss_pred HHHHHHH
Q 024201 227 ETLRTLQ 233 (271)
Q Consensus 227 e~l~~l~ 233 (271)
++++.++
T Consensus 158 ~~l~~l~ 164 (175)
T 1xvq_A 158 AALAALG 164 (175)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8877765
No 48
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=99.94 E-value=8.5e-27 Score=191.46 Aligned_cols=144 Identities=16% Similarity=0.236 Sum_probs=116.1
Q ss_pred CCCCCCCCeEEeeec-CCCc-----eeEecccc-cCCcEEEEEEecCCCCCChHHH-HHHHHHHHHHHHhcCcE-EEEEe
Q 024201 79 LVGNTAPDFAAEAVF-DQEF-----INVKLSDY-IGKKYVILFFYPLDFTFVCPTE-ITAFSDRYTEFEKLNTE-ILGVS 149 (271)
Q Consensus 79 ~~G~~~Pdf~l~~~~-~~~g-----~~v~Lsd~-~gkk~vvL~F~~~t~Cp~C~~~-l~~L~~~~~~~~~~gv~-vv~VS 149 (271)
.+|+++|+|+++++. +.+| +.++|+++ +|| ++||+||+++|||+|+.+ +|.|++++++|+++|++ ||+||
T Consensus 8 ~~g~~aP~f~l~~~~~~~~G~~~~~~~v~l~~~~~gk-~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~g~~~vv~Is 86 (171)
T 2pwj_A 8 DILSAASNVSLQKARTWDEGVESKFSTTPVNDIFKDK-KVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAKGVDSVICVA 86 (171)
T ss_dssp --CCCSSSBCCCSCEECCCSSCTTCCCEEHHHHHTTS-EEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHTTCSEEEEEE
T ss_pred cccCcCCCeEEecccccccCCccCcceEEHHHHhCCC-CEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEe
Confidence 357799999998552 0135 89999996 998 455555559999999999 99999999999999999 99999
Q ss_pred CCCHHHHHHHHHHhhhcCCCCC--cccceEEcCChHHHHHhCCccCCC----Cc-cceEEEEEcCCCcEEEEEeccCCCC
Q 024201 150 TDSVFSHLAWVQTDRKSGGLGD--LKYPLIADITKSISKSYGVLIPDQ----GI-ALRGLFIIDKEGVIQHSTINNLAIG 222 (271)
Q Consensus 150 ~d~~~~~~~~~~~~~~~~~~~~--~~f~~l~D~~~~~~~~ygv~~~~~----g~-~~P~~~lID~~G~V~~~~~~~~~~~ 222 (271)
.|+.+.+++|.+++ + .+|++++|.+++++++||+..... |+ ..|++|||| ||+|++.+++....+
T Consensus 87 ~d~~~~~~~~~~~~-------~~~~~fp~l~D~~~~~~~~ygv~~~~~~~~~g~~~~~~t~~I~-~G~I~~~~~~~~~~~ 158 (171)
T 2pwj_A 87 INDPYTVNAWAEKI-------QAKDAIEFYGDFDGSFHKSLELTTDLSAGLLGIRSERWSAYVV-DGKVKALNVEESPSD 158 (171)
T ss_dssp SSCHHHHHHHHHHT-------TCTTTSEEEECTTCHHHHHHTCEEECTTTTCCEEECCEEEEEE-TTEEEEEEECSSTTC
T ss_pred CCCHHHHHHHHHHh-------CCCCceEEEECCccHHHHHhCCccccccccCCcccceeEEEEE-CCEEEEEEeecCCCC
Confidence 99999999999987 5 479999999999999999985431 22 357899999 999999998866543
Q ss_pred ---CCHHHHHHH
Q 024201 223 ---RSVDETLRT 231 (271)
Q Consensus 223 ---~~~~e~l~~ 231 (271)
.+++++|+.
T Consensus 159 ~~~~~~~~il~~ 170 (171)
T 2pwj_A 159 VKVSGAETILGQ 170 (171)
T ss_dssp CSSSSHHHHHHH
T ss_pred CcccCHHHHHhc
Confidence 356666654
No 49
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=99.94 E-value=1.1e-25 Score=179.62 Aligned_cols=134 Identities=15% Similarity=0.307 Sum_probs=119.1
Q ss_pred CCCCCCCCCeEEeeecCCCceeEecc--cccCCcEEEEEEecCCCCCC--hHHHHHHHHHHHHHH-HhcCcEEEEEeCCC
Q 024201 78 PLVGNTAPDFAAEAVFDQEFINVKLS--DYIGKKYVILFFYPLDFTFV--CPTEITAFSDRYTEF-EKLNTEILGVSTDS 152 (271)
Q Consensus 78 ~~~G~~~Pdf~l~~~~~~~g~~v~Ls--d~~gkk~vvL~F~~~t~Cp~--C~~~l~~L~~~~~~~-~~~gv~vv~VS~d~ 152 (271)
+.+|+++|+|++. +.+|+.++|+ +++|| ++||+|| ++||++ |+.+++.|.+++++| +++|+.+|+|++|+
T Consensus 5 l~~G~~~p~f~l~---~~~g~~~~l~~~~~~gk-~vll~F~-a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~ 79 (150)
T 3fw2_A 5 SEIGKYAPFFSLP---NAKGEKITRSSDAFKQK-SLLINFW-ASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDV 79 (150)
T ss_dssp TSTTSBCCCCCEE---BTTCCEECTTSTTTTTS-EEEEEEE-CTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCS
T ss_pred ccCCCcCCccEeE---CCCCCEEecchhhhCCC-EEEEEEE-eCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCC
Confidence 7899999999998 6778899999 99998 9999999 899999 999999999999999 88899999999996
Q ss_pred H-HHHHHHHHHhhhcCCCCCcccceEEcC---ChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHH
Q 024201 153 V-FSHLAWVQTDRKSGGLGDLKYPLIADI---TKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDET 228 (271)
Q Consensus 153 ~-~~~~~~~~~~~~~~~~~~~~f~~l~D~---~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~ 228 (271)
. +..++|.+.+ +++|+++.|. +.++++.||+. .+|++||||++|+|++.+. +.+++
T Consensus 80 ~~~~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~v~------~~P~~~lid~~G~i~~~~~-------~~~~l 139 (150)
T 3fw2_A 80 DKQQWKDAIKRD-------TLDWEQVCDFGGLNSEVAKQYSIY------KIPANILLSSDGKILAKNL-------RGEEL 139 (150)
T ss_dssp CHHHHHHHHHHT-------TCCSEEECCSCGGGCHHHHHTTCC------SSSEEEEECTTSBEEEESC-------CHHHH
T ss_pred CHHHHHHHHHHh-------CCCceEEEcCcccchHHHHHcCCC------ccCeEEEECCCCEEEEccC-------CHHHH
Confidence 4 5667888777 7899999998 57999999999 8999999999999999963 56677
Q ss_pred HHHHHHHH
Q 024201 229 LRTLQALQ 236 (271)
Q Consensus 229 l~~l~~l~ 236 (271)
.+.|+.+.
T Consensus 140 ~~~l~~ll 147 (150)
T 3fw2_A 140 KKKIENIV 147 (150)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77776653
No 50
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.94 E-value=3e-25 Score=176.69 Aligned_cols=139 Identities=19% Similarity=0.276 Sum_probs=123.2
Q ss_pred CCCCCCCCCCeEEeeecCCCceeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCC-HHH
Q 024201 77 PPLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDS-VFS 155 (271)
Q Consensus 77 ~~~~G~~~Pdf~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~-~~~ 155 (271)
.+.+|+++|+|++. + +|+.+++++++|| ++||+|| ++|||.|+.+++.|.+++++++++|+.+|+|++|. .+.
T Consensus 2 ~l~~G~~~P~f~l~---~-~g~~~~l~~~~gk-~vll~f~-~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~ 75 (152)
T 3gl3_A 2 SLDKGDKAPDFALP---G-KTGVVKLSDKTGS-VVYLDFW-ASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDAKTGD 75 (152)
T ss_dssp CCCTTSBCCCCEEE---B-SSSEEEGGGGTTS-EEEEEEE-CTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSHHH
T ss_pred CCCCCCcCCceEee---C-CCCeEeHHHhCCC-EEEEEEE-CCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCCCHHH
Confidence 47899999999998 5 7789999999998 9999999 99999999999999999999999999999999984 566
Q ss_pred HHHHHHHhhhcCCCCCcccceEEcCChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHH
Q 024201 156 HLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l 235 (271)
..+|.+.+ +++|+++.|.+.++++.||+. .+|++||||++|+|++.+.+.. ..+.+++.+.|+++
T Consensus 76 ~~~~~~~~-------~~~~~~~~d~~~~~~~~~~v~------~~P~~~lid~~G~i~~~~~g~~--~~~~~~l~~~i~~~ 140 (152)
T 3gl3_A 76 AMKFLAQV-------PAEFTVAFDPKGQTPRLYGVK------GMPTSFLIDRNGKVLLQHVGFR--PADKEALEQQILAA 140 (152)
T ss_dssp HHHHHHHS-------CCCSEEEECTTCHHHHHTTCC------SSSEEEEECTTSBEEEEEESCC--TTTHHHHHHHHHHH
T ss_pred HHHHHHHc-------CCCCceeECCcchhHHHcCCC------CCCeEEEECCCCCEEEEEccCC--CcCHHHHHHHHHHH
Confidence 67888877 789999999999999999998 8999999999999999976542 24567888888766
Q ss_pred H
Q 024201 236 Q 236 (271)
Q Consensus 236 ~ 236 (271)
.
T Consensus 141 ~ 141 (152)
T 3gl3_A 141 L 141 (152)
T ss_dssp T
T ss_pred H
Confidence 4
No 51
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.94 E-value=7.3e-26 Score=178.49 Aligned_cols=132 Identities=17% Similarity=0.162 Sum_probs=114.8
Q ss_pred CCCCCCCCeEEeeecCCCceeEecccccCCcEEEEEEecCCCCCChHHHHHHHHH---HHHHHHhcCcEEEEEeCCC-HH
Q 024201 79 LVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSD---RYTEFEKLNTEILGVSTDS-VF 154 (271)
Q Consensus 79 ~~G~~~Pdf~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~---~~~~~~~~gv~vv~VS~d~-~~ 154 (271)
++|+++|+|++. +.+|+.+++++++|| ++||+|| ++||++|+.++|.|.+ ++++++++|+.+|+|++|. .+
T Consensus 2 ~~G~~~p~f~l~---~~~g~~~~l~~~~gk-~vll~F~-a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~~~~ 76 (142)
T 3ewl_A 2 NAGMKAADFTYV---TVHGDNSRMSRLKAQ-YTMLFFY-DPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDENRE 76 (142)
T ss_dssp CTTSBCCCCEEE---CTTCCEEEGGGCCCS-EEEEEEC-CSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSSCHH
T ss_pred CCCCcCCCCEEE---CCCCCEEEhhhcCCC-EEEEEEE-CCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecCCHH
Confidence 579999999998 678889999999998 9999999 9999999999999998 9999999999999999984 55
Q ss_pred HHHHHHHHhhhcCCCCCcccceEEcCChHHHH--HhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHH
Q 024201 155 SHLAWVQTDRKSGGLGDLKYPLIADITKSISK--SYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTL 232 (271)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~--~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l 232 (271)
..++|.+++ +++|+++.|.++.+.. .||+. .+|++||||++|+|++.. ...+++.+.|
T Consensus 77 ~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~v~------~~P~~~lid~~G~i~~~~-------~~~~~l~~~l 136 (142)
T 3ewl_A 77 EWATKAVYM-------PQGWIVGWNKAGDIRTRQLYDIR------ATPTIYLLDGRKRVILKD-------TSMEQLIDYL 136 (142)
T ss_dssp HHHHHHTTS-------CTTCEEEECTTCHHHHTTCSCCC------SSSEEEEECTTCBEEECS-------CCHHHHHHHH
T ss_pred HHHHHHHHc-------CCCcceeeCCccchhhHHHcCCC------CCCeEEEECCCCCEEecC-------CCHHHHHHHH
Confidence 556777666 7899999999999987 99998 899999999999999842 3567777776
Q ss_pred HHH
Q 024201 233 QAL 235 (271)
Q Consensus 233 ~~l 235 (271)
+++
T Consensus 137 ~~~ 139 (142)
T 3ewl_A 137 ATQ 139 (142)
T ss_dssp HC-
T ss_pred HHH
Confidence 654
No 52
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.93 E-value=2.5e-25 Score=177.88 Aligned_cols=135 Identities=24% Similarity=0.356 Sum_probs=117.9
Q ss_pred CCCCCCCCCCeEEeeecCCCceeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCC-HHH
Q 024201 77 PPLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDS-VFS 155 (271)
Q Consensus 77 ~~~~G~~~Pdf~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~-~~~ 155 (271)
.+.+|+++|+|++. +.+|+.+++++++|| ++||+|| ++||++|+.+++.|.+++++++++|+.|++|++|. .+.
T Consensus 2 ~l~~g~~~p~f~l~---~~~G~~~~l~~~~gk-~vll~F~-a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~ 76 (152)
T 2lrn_A 2 SLATGSVAPAITGI---DLKGNSVSLNDFKGK-YVLVDFW-FAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDRREED 76 (152)
T ss_dssp CSCTTEECCCCEEE---CSSSCEEESGGGTTS-EEEEEEE-CTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCSCHHH
T ss_pred CccCCCcCCCceeE---cCCCCEEeHHHcCCC-EEEEEEE-CCCChhHHHHHHHHHHHHHHhccCCeEEEEEEccCCHHH
Confidence 36799999999998 677889999999998 9999999 99999999999999999999998899999999985 456
Q ss_pred HHHHHHHhhhcCCCCCcccceEEcC---ChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHH
Q 024201 156 HLAWVQTDRKSGGLGDLKYPLIADI---TKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTL 232 (271)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~f~~l~D~---~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l 232 (271)
.++|.+.+ +++|+++.|. +.++++.||+. .+|++||||++|+|++..+ ..+++.+.|
T Consensus 77 ~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~v~------~~P~~~lid~~G~i~~~~~-------~~~~l~~~l 136 (152)
T 2lrn_A 77 WKKAIEED-------KSYWNQVLLQKDDVKDVLESYCIV------GFPHIILVDPEGKIVAKEL-------RGDDLYNTV 136 (152)
T ss_dssp HHHHHHHH-------TCCSEEEEECHHHHHHHHHHTTCC------SSCEEEEECTTSEEEEECC-------CTTHHHHHH
T ss_pred HHHHHHHh-------CCCCeEEecccchhHHHHHHhCCC------cCCeEEEECCCCeEEEeeC-------CHHHHHHHH
Confidence 67777776 7899999999 78999999998 8999999999999999863 224666666
Q ss_pred HHHH
Q 024201 233 QALQ 236 (271)
Q Consensus 233 ~~l~ 236 (271)
+.+.
T Consensus 137 ~~l~ 140 (152)
T 2lrn_A 137 EKFV 140 (152)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6654
No 53
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.93 E-value=3.1e-25 Score=177.05 Aligned_cols=142 Identities=25% Similarity=0.361 Sum_probs=123.0
Q ss_pred CCCCCCCCCeEEeeecCCCceeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCC--HHH
Q 024201 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDS--VFS 155 (271)
Q Consensus 78 ~~~G~~~Pdf~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~--~~~ 155 (271)
+.+|+++|+|++. +.+|+.+++++++|| ++||+|| ++||+.|+.+++.|.+++++++++++.+|+|++|. .+.
T Consensus 2 ~~~G~~~p~~~l~---~~~g~~~~l~~~~gk-~vll~f~-~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~ 76 (154)
T 3kcm_A 2 SLEENPAPDFTLN---TLNGEVVKLSDLKGQ-VVIVNFW-ATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEGGKVA 76 (154)
T ss_dssp -CTTSBCCCCEEE---CTTSCEEEGGGGTTS-EEEEEEE-CTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTTHHHH
T ss_pred CCCCCCCCCeEEE---cCCCCEEehhhcCCC-EEEEEEE-CCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCcchHH
Confidence 5689999999998 677889999999998 9999999 99999999999999999999998899999999987 667
Q ss_pred HHHHHHHhhhcCCCCCcccceEEcCChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHH
Q 024201 156 HLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l 235 (271)
.++|.+.+ +++|+++.|.+..+++.||+. .+|++||||++|+|++.+.+... .+.+++.+.|+.+
T Consensus 77 ~~~~~~~~-------~~~~~~~~d~~~~~~~~~~v~------~~P~~~lid~~G~i~~~~~g~~~--~~~~~l~~~l~~l 141 (154)
T 3kcm_A 77 VEEFFRKT-------GFTLPVLLDADKRVGKLYGTT------GVPETFVIDRHGVILKKVVGAME--WDHPEVIAFLNNE 141 (154)
T ss_dssp HHHHHHHH-------CCCCCEEECTTCHHHHHHTCC------SBCEEEEECTTSBEEEEEESCCC--TTSHHHHHHHHTC
T ss_pred HHHHHHHc-------CCCeeEEecCchHHHHHhCCC------CCCeEEEECCCCcEEEEEcCCCc--cccHHHHHHHHHH
Confidence 78888888 789999999999999999999 89999999999999999766433 2457888888777
Q ss_pred HHhh
Q 024201 236 QYVQ 239 (271)
Q Consensus 236 ~~~~ 239 (271)
....
T Consensus 142 ~~~~ 145 (154)
T 3kcm_A 142 LSKA 145 (154)
T ss_dssp ----
T ss_pred HHHh
Confidence 5443
No 54
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=99.93 E-value=2.6e-25 Score=181.15 Aligned_cols=146 Identities=14% Similarity=0.250 Sum_probs=120.8
Q ss_pred CCCCCCCCCCeEEeeecCCCceeEecccccCCcEEEEEEecCCCCC-ChHHHHHHHHHHHHHHHhcC--cEEEEEeCC--
Q 024201 77 PPLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTF-VCPTEITAFSDRYTEFEKLN--TEILGVSTD-- 151 (271)
Q Consensus 77 ~~~~G~~~Pdf~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp-~C~~~l~~L~~~~~~~~~~g--v~vv~VS~d-- 151 (271)
.+.+|+.+|+|++. +.+|+.++|++++|| ++||+|| ++||+ +|+.+++.|.+++++|+++| ++||+|++|
T Consensus 6 ~l~~g~~~p~f~l~---~~~G~~~~l~~~~gk-~vll~f~-~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~ 80 (174)
T 1xzo_A 6 KDPLNYEVEPFTFQ---NQDGKNVSLESLKGE-VWLADFI-FTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPE 80 (174)
T ss_dssp CSCCCEECCCCEEE---CTTSCEEETGGGTTC-CEEEEEE-CSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCTT
T ss_pred cCccccccCCcEEE---cCCCCEEehhhcCCC-EEEEEEE-cCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCCC
Confidence 37899999999998 678889999999998 8999999 99999 99999999999999999886 999999997
Q ss_pred --CHHHHHHHHHHhhhcCCCCCccc---ceEEcCChHHHHHhCC-----ccC-----CCCccceEEEEEcCCCcEEEEEe
Q 024201 152 --SVFSHLAWVQTDRKSGGLGDLKY---PLIADITKSISKSYGV-----LIP-----DQGIALRGLFIIDKEGVIQHSTI 216 (271)
Q Consensus 152 --~~~~~~~~~~~~~~~~~~~~~~f---~~l~D~~~~~~~~ygv-----~~~-----~~g~~~P~~~lID~~G~V~~~~~ 216 (271)
+++.+++|.+.+ +++| +++.|.+.++.+.|++ ... ....+.|++||||++|+|++.+.
T Consensus 81 ~d~~~~~~~~~~~~-------~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~ 153 (174)
T 1xzo_A 81 NDKPKQLKKFAANY-------PLSFDNWDFLTGYSQSEIEEFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKVLKDYN 153 (174)
T ss_dssp TCCHHHHHHHHTTS-------CCCGGGEEEEBCSCHHHHHHHHHHHHCCCCCCCSSCCSCCSCCEEEEECTTSEEEEEEE
T ss_pred CCCHHHHHHHHHHc-------CCCCcceEEEeCCCHHHHHHHHHhhcCeeEeecCCCCeeeeeeEEEEECCCCeEEEEEc
Confidence 566778888776 5566 8999988888877753 100 01237899999999999999986
Q ss_pred ccCCCCCCHHHHHHHHHHHH
Q 024201 217 NNLAIGRSVDETLRTLQALQ 236 (271)
Q Consensus 217 ~~~~~~~~~~e~l~~l~~l~ 236 (271)
+... .+.+++++.|+.+.
T Consensus 154 g~~~--~~~~~l~~~l~~ll 171 (174)
T 1xzo_A 154 GVEN--TPYDDIISDVKSAS 171 (174)
T ss_dssp SSSS--CCHHHHHHHHHHHT
T ss_pred CCCC--CCHHHHHHHHHHHH
Confidence 5432 35788888888763
No 55
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.93 E-value=1.5e-25 Score=179.78 Aligned_cols=137 Identities=19% Similarity=0.260 Sum_probs=120.2
Q ss_pred CCCCCCCeEEeeecCCCceeEecccccCCcEEEEEEecCCCCCChHHH-HHHHHHHHHHHHhcCcEEEEEeC-------C
Q 024201 80 VGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTE-ITAFSDRYTEFEKLNTEILGVST-------D 151 (271)
Q Consensus 80 ~G~~~Pdf~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~-l~~L~~~~~~~~~~gv~vv~VS~-------d 151 (271)
+|+++|+|++.++. .+|+.+++++++|| ++||+|| ++||++|+.+ ++.|.+++++|+++++.+|+|++ +
T Consensus 2 ~g~~aP~f~l~~~~-~~g~~~~l~~~~gk-~vlv~f~-a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~ 78 (158)
T 3eyt_A 2 NAMKAPELQIQQWF-NSATDLTLADLRGK-VIVIEAF-QMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTVFEHHEAM 78 (158)
T ss_dssp CCEECCCCCEEEEE-SCSSCCCTGGGTTS-EEEEEEE-CTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGS
T ss_pred CCCcCCCceehhhh-cCCCccCHHHhCCC-EEEEEEE-CCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEecccccccC
Confidence 68999999998542 35779999999998 9999999 8999999996 99999999999988999999996 4
Q ss_pred CHHHHHHHHHHhhhcCCCCCcccceEEcCCh-----HHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHH
Q 024201 152 SVFSHLAWVQTDRKSGGLGDLKYPLIADITK-----SISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVD 226 (271)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~-----~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~ 226 (271)
+.+..++|.+++ +++|+++.|.+. ++++.||+. .+|++||||++|+|++++.+. ...+
T Consensus 79 ~~~~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~~~v~------~~P~~~lid~~G~i~~~~~g~----~~~~ 141 (158)
T 3eyt_A 79 TPISLKAFLHEY-------RIKFPVGVDQPGDGAMPRTMAAYQMR------GTPSLLLIDKAGDLRAHHFGD----VSEL 141 (158)
T ss_dssp CHHHHHHHHHHT-------TCCSCEEEECCCSSSSCHHHHHTTCC------SSSEEEEECTTSEEEEEEESC----CCHH
T ss_pred CHHHHHHHHHHc-------CCCceEEEcCccchhhHHHHHHcCCC------CCCEEEEECCCCCEEEEEeCC----CCHH
Confidence 677888999887 788999999987 799999998 899999999999999997654 3467
Q ss_pred HHHHHHHHHH
Q 024201 227 ETLRTLQALQ 236 (271)
Q Consensus 227 e~l~~l~~l~ 236 (271)
++.+.|+.+.
T Consensus 142 ~l~~~i~~ll 151 (158)
T 3eyt_A 142 LLGAEIATLL 151 (158)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 7888887764
No 56
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=99.93 E-value=6.5e-26 Score=179.48 Aligned_cols=120 Identities=18% Similarity=0.253 Sum_probs=104.8
Q ss_pred CCCCCCCCCeEEeeecCCCceeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCC-HHHH
Q 024201 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDS-VFSH 156 (271)
Q Consensus 78 ~~~G~~~Pdf~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~-~~~~ 156 (271)
+.+|+++|+|++ + .+|+.++|++++|| ++||+|| ++||++|+.++|.|.+++++|+++|++||+|+.|. .+..
T Consensus 7 l~~G~~~P~f~l-~---~~g~~~~l~~~~gk-~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~ 80 (143)
T 4fo5_A 7 VNPGDLAPRIEF-L---GNDAKASFHNQLGR-YTLLNFW-AAYDAESRARNVQLANEVNKFGPDKIAMCSISMDEKESIF 80 (143)
T ss_dssp SSTTSBCCCCCC---------CCCSCCSSCC-EEEEEEE-CTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECCSCHHHH
T ss_pred cCCcccCCceEE-c---CCCCEEEHHHhCCC-EEEEEEE-cCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEccCCHHHH
Confidence 789999999999 4 46679999999998 9999999 99999999999999999999998899999999995 4566
Q ss_pred HHHHHHhhhcCCCCCccc-ceEEcCC---hHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEe
Q 024201 157 LAWVQTDRKSGGLGDLKY-PLIADIT---KSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTI 216 (271)
Q Consensus 157 ~~~~~~~~~~~~~~~~~f-~~l~D~~---~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~ 216 (271)
+++.+++ +++| +++.|.. .++++.||+. .+|++||||++|+|+++..
T Consensus 81 ~~~~~~~-------~~~~~~~~~d~~~~~~~~~~~~~v~------~~P~~~lid~~G~i~~~~~ 131 (143)
T 4fo5_A 81 TETVKID-------KLDLSTQFHEGLGKESELYKKYDLR------KGFKNFLINDEGVIIAANV 131 (143)
T ss_dssp HHHHHHH-------TCCGGGEEECTTGGGSHHHHHTTGG------GCCCEEEECTTSBEEEESC
T ss_pred HHHHHHh-------CCCCceeeecccccchHHHHHcCCC------CCCcEEEECCCCEEEEccC
Confidence 7788877 7889 8888884 6899999999 8999999999999999853
No 57
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.93 E-value=2e-25 Score=176.40 Aligned_cols=131 Identities=14% Similarity=0.136 Sum_probs=111.0
Q ss_pred CCCCCCCCCeEEeeecCCCceeEecccccCCcEEEEEEecCCCCCChHHHHHHHHH---HHHHHHhcCcEEEEEeCCCH-
Q 024201 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSD---RYTEFEKLNTEILGVSTDSV- 153 (271)
Q Consensus 78 ~~~G~~~Pdf~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~---~~~~~~~~gv~vv~VS~d~~- 153 (271)
..+|+++|+|++. +.+|+.++|++++|| ++||+|| ++||++|+.++|.|.+ ++++++++++.||+|+.|..
T Consensus 5 ~~~G~~ap~f~l~---~~~g~~~~l~~~~gk-~vll~F~-a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~~~ 79 (142)
T 3eur_A 5 NRLGTKALNFTYT---LDSGVKGTLYQFPAE-YTLLFIN-NPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDEEL 79 (142)
T ss_dssp TCTTSBCCCCEEE---ETTSCEEETTTCCCS-EEEEEEC-CSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSSCH
T ss_pred hcCCCccCCcEEE---cCCCCEeeHHHcCCC-EEEEEEE-CCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCCCH
Confidence 5689999999998 667889999999997 9999999 9999999999999999 99999989999999999874
Q ss_pred HHHHHHHHHhhhcCCCCCcccceEEcCChH--HHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHH
Q 024201 154 FSHLAWVQTDRKSGGLGDLKYPLIADITKS--ISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRT 231 (271)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~--~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~ 231 (271)
+..+++.+++ +..|+.+.|.+.. +.+.|++. .+|++||||++|+|++... ..+++.+.
T Consensus 80 ~~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~v~------~~P~~~lid~~G~i~~~~~-------~~~~l~~~ 139 (142)
T 3eur_A 80 DEWKKHRNDF-------AKEWTNGYDKELVIKNKNLYDLR------AIPTLYLLDKNKTVLLKDA-------TLQKVEQY 139 (142)
T ss_dssp HHHHHHGGGS-------CTTSEEEECTTCHHHHTTCSCCT------TCSEEEEECTTCBEEEEEE-------CHHHHHHH
T ss_pred HHHHHHHHhc-------ccccccccCccchhhhhhhcCCC------cCCeEEEECCCCcEEecCC-------CHHHHHHH
Confidence 3334444444 6789999998865 78899998 8999999999999999864 24555555
Q ss_pred HH
Q 024201 232 LQ 233 (271)
Q Consensus 232 l~ 233 (271)
|+
T Consensus 140 l~ 141 (142)
T 3eur_A 140 LA 141 (142)
T ss_dssp HH
T ss_pred Hh
Confidence 43
No 58
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.93 E-value=9.8e-26 Score=178.18 Aligned_cols=137 Identities=21% Similarity=0.334 Sum_probs=120.4
Q ss_pred CCCCCCCCCCeEEeeecCCCceeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCC-CHHH
Q 024201 77 PPLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTD-SVFS 155 (271)
Q Consensus 77 ~~~~G~~~Pdf~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d-~~~~ 155 (271)
++.+|+++|+|++. +.+|+.+++++++|| ++||+|| ++||++|+.+++.|.+++++++++|+.+|+|+.| +.+.
T Consensus 4 ~~~~G~~~p~~~l~---~~~g~~~~l~~~~gk-~vll~f~-~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~ 78 (148)
T 3hcz_A 4 PLLLGKKAPNLYMT---DTTGTYRYLYDVQAK-YTILFFW-DSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIERKDEE 78 (148)
T ss_dssp CCCTTSBCCCCCCB---CTTSCBCCGGGCCCS-EEEEEEE-CGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCSSSHH
T ss_pred ccCCCCcCCceEEe---cCCCCEEEhHHcCCC-EEEEEEE-CCCCccHHHHHHHHHHHHHHhccCCEEEEEEEecCCHHH
Confidence 36799999999998 677889999999998 9999999 9999999999999999999999989999999998 4567
Q ss_pred HHHHHHHhhhcCCCCCcc-cceEEcCChH--HHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHH
Q 024201 156 HLAWVQTDRKSGGLGDLK-YPLIADITKS--ISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTL 232 (271)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~-f~~l~D~~~~--~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l 232 (271)
.++|.+.+ +++ |+++.|.+.. +++.||+. .+|++||||++|+|++...+. ...+++++.+
T Consensus 79 ~~~~~~~~-------~~~~~~~~~d~~~~~~~~~~~~i~------~~P~~~lid~~G~i~~~~~g~----~~~~~~l~~l 141 (148)
T 3hcz_A 79 WLKFIRSK-------KIGGWLNVRDSKNHTDFKITYDIY------ATPVLYVLDKNKVIIAKRIGY----ENLDDFLVQY 141 (148)
T ss_dssp HHHHHHHH-------TCTTSEEEECTTCCCCHHHHHCCC------SSCEEEEECTTCBEEEESCCG----GGHHHHHHHH
T ss_pred HHHHHHHc-------CCCCceEEeccccchhHHHhcCcC------CCCEEEEECCCCcEEEecCCH----HHHHHHHHHH
Confidence 78888887 666 9999999987 99999999 899999999999999986543 4567777666
Q ss_pred HHH
Q 024201 233 QAL 235 (271)
Q Consensus 233 ~~l 235 (271)
..+
T Consensus 142 ~~~ 144 (148)
T 3hcz_A 142 EKS 144 (148)
T ss_dssp HHH
T ss_pred HHH
Confidence 544
No 59
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.93 E-value=6.5e-25 Score=174.95 Aligned_cols=136 Identities=22% Similarity=0.408 Sum_probs=121.1
Q ss_pred CCCCCCCCeEEeeecCCCceeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCC-HHHHH
Q 024201 79 LVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDS-VFSHL 157 (271)
Q Consensus 79 ~~G~~~Pdf~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~-~~~~~ 157 (271)
++|+++|+|++. +.+|+.+++++++|| ++||+|| ++||++|+.+++.|.+++++++++++.+++|++|. .+..+
T Consensus 1 ~~G~~~p~~~l~---~~~g~~~~l~~~~gk-~vlv~F~-~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~ 75 (151)
T 2f9s_A 1 SEGSDAPNFVLE---DTNGKRIELSDLKGK-GVFLNFW-GTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVH 75 (151)
T ss_dssp -CCEECCCCEEE---CTTCCEEEGGGGTTS-EEEEEEE-CTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHH
T ss_pred CCCCcCCcceeE---cCCCCEEEHHHcCCC-EEEEEEE-CCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHH
Confidence 379999999998 677889999999998 8999999 99999999999999999999998899999999864 56778
Q ss_pred HHHHHhhhcCCCCCcccceEEcCChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHHH
Q 024201 158 AWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQ 236 (271)
Q Consensus 158 ~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l~ 236 (271)
+|.+.+ +++|+++.|.+.++++.||+. .+|++||||++|+|+..+.+. ...+++.+.|+.+.
T Consensus 76 ~~~~~~-------~~~~~~~~d~~~~~~~~~~v~------~~P~~~lid~~G~i~~~~~G~----~~~~~l~~~l~~ll 137 (151)
T 2f9s_A 76 NFMKSY-------GVNFPVVLDTDRQVLDAYDVS------PLPTTFLINPEGKVVKVVTGT----MTESMIHDYMNLIK 137 (151)
T ss_dssp HHHHHH-------TCCSCEEEETTSHHHHHTTCC------SSCEEEEECTTSEEEEEEESC----CCHHHHHHHHHHHS
T ss_pred HHHHHc-------CCCceEEECCchHHHHhcCCC------CCCeEEEECCCCcEEEEEeCC----CCHHHHHHHHHHHH
Confidence 888887 788999999999999999998 899999999999999987643 35778888888764
No 60
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.93 E-value=3.6e-25 Score=177.77 Aligned_cols=137 Identities=12% Similarity=0.187 Sum_probs=120.5
Q ss_pred CCCCCCCCeEEeeecCCCceeEecccccCCcEEEEEEecCCCCCChHHH-HHHHHHHHHHHHhcCcEEEEEeC-------
Q 024201 79 LVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTE-ITAFSDRYTEFEKLNTEILGVST------- 150 (271)
Q Consensus 79 ~~G~~~Pdf~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~-l~~L~~~~~~~~~~gv~vv~VS~------- 150 (271)
..|.++|+|++.++ .+|+.++|++++|| ++||+|| ++||++|..+ ++.|.+++++|+++|+.+|+|++
T Consensus 4 ~~g~~~p~~~~~~~--~~g~~~~l~~~~gk-~vlv~F~-a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~ 79 (160)
T 3lor_A 4 LDNAPLLELDVQEW--VNHEGLSNEDLRGK-VVVVEVF-QMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSVFEHHDV 79 (160)
T ss_dssp CTTCCBCCCCEEEE--SSSCCCCHHHHTTS-EEEEEEE-CTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGG
T ss_pred cCCCcCCCcccccc--cCCCccCHHHhCCC-EEEEEEE-cCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEecccccccc
Confidence 36999999999842 45679999999998 9999999 8999999995 99999999999988999999998
Q ss_pred CCHHHHHHHHHHhhhcCCCCCcccceEEcCChH------HHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCC
Q 024201 151 DSVFSHLAWVQTDRKSGGLGDLKYPLIADITKS------ISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRS 224 (271)
Q Consensus 151 d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~------~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~ 224 (271)
++.+..++|.+.+ +++|+++.|.+.. +++.||+. .+|++||||++|+|++++.+. .+
T Consensus 80 ~~~~~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~~~~v~------~~P~~~lid~~G~i~~~~~g~----~~ 142 (160)
T 3lor_A 80 MTPEALKVFIDEF-------GIKFPVAVDMPREGQRIPSTMKKYRLE------GTPSIILADRKGRIRQVQFGQ----VD 142 (160)
T ss_dssp SCHHHHHHHHHHT-------TCCSCEEEECCCTTCSSCHHHHHTTCC------SSSEEEEECTTSBEEEEEESC----CC
T ss_pred CCHHHHHHHHHHc-------CCCCcEEECCccccchhhhHHHhcccC------ccceEEEECCCCcEEEEecCc----CC
Confidence 5778888999887 7889999999988 99999998 899999999999999997654 34
Q ss_pred HHHHHHHHHHHH
Q 024201 225 VDETLRTLQALQ 236 (271)
Q Consensus 225 ~~e~l~~l~~l~ 236 (271)
.+++.+.|+.+.
T Consensus 143 ~~~l~~~i~~ll 154 (160)
T 3lor_A 143 DFVLGLLLGSLL 154 (160)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 677777877664
No 61
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=99.93 E-value=7.4e-25 Score=199.23 Aligned_cols=169 Identities=18% Similarity=0.252 Sum_probs=140.5
Q ss_pred CCCCCCCCCeE-----EeeecCCCceeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCC-
Q 024201 78 PLVGNTAPDFA-----AEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTD- 151 (271)
Q Consensus 78 ~~~G~~~Pdf~-----l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d- 151 (271)
+.+|+++|+|+ +. +.+|+.++|++++|| ++||+|| ++||++|+.++|.|.+++++|+++++.||+|++|
T Consensus 51 l~vG~~aPdF~~~~~wL~---d~dG~~vsLsdl~GK-~vLl~F~-atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d~ 125 (352)
T 2hyx_A 51 LESCGTAPDLKGITGWLN---TPGNKPIDLKSLRGK-VVLIDFW-AYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPE 125 (352)
T ss_dssp CCCCCBCCCCCSCCEEES---SGGGCCCCGGGGTTS-EEEEEEE-CTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECCS
T ss_pred cCCCCcCCCccccccccC---CCCCCEEcHHHhCCC-EEEEEEE-CCCChhHHHHHHHHHHHHHHhhcCCeEEEEEECCc
Confidence 78999999999 65 778889999999998 9999999 8999999999999999999999889999999985
Q ss_pred -----CHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHH
Q 024201 152 -----SVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVD 226 (271)
Q Consensus 152 -----~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~ 226 (271)
+.+..++|++++ +++|+++.|.+.++++.|++. .+|++||||++|+|++.+.+. ...+
T Consensus 126 ~~~~d~~~~~~~~~~~~-------~l~fpv~~D~~~~l~~~ygV~------~~Pt~~lID~~G~Iv~~~~G~----~~~~ 188 (352)
T 2hyx_A 126 YAFEKVPGNVAKGAANL-------GISYPIALDNNYATWTNYRNR------YWPAEYLIDATGTVRHIKFGE----GDYN 188 (352)
T ss_dssp SGGGGCHHHHHHHHHHH-------TCCSCEEECTTSHHHHHTTCC------EESEEEEECTTSBEEEEEESB----CCHH
T ss_pred ccccCCHHHHHHHHHHc-------CCCccEEeCCcHHHHHHcCCC------ccCEEEEEeCCCeEEEEEcCC----CCHH
Confidence 466778888887 789999999999999999998 899999999999999997654 3467
Q ss_pred HHHHHHHHHHHhhhCCCcccCCCCCCCCCCCCCC-chhhHHHhh
Q 024201 227 ETLRTLQALQYVQENPDEVCPAGWKPGDKSMKPD-PKLSKEYFA 269 (271)
Q Consensus 227 e~l~~l~~l~~~~~~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~ 269 (271)
++.+.|+.+.. +.+++...|+.....+...... ...+++|++
T Consensus 189 ~l~~~I~~lL~-e~~~~~~lpap~~~~~~~~~~~~~~spE~~~g 231 (352)
T 2hyx_A 189 VTETLVRQLLN-DAKPGVKLPQPSSTTTPDLTPRAALTPETYFG 231 (352)
T ss_dssp HHHHHHHHHHH-HHSTTCCCCSCGGGTSCCCCCCSCSCCCEECS
T ss_pred HHHHHHHHHHh-hccCCCCCCCCccccccccCccccCCCccccc
Confidence 88888887763 3445667777765553332222 455677765
No 62
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.92 E-value=2.2e-24 Score=171.87 Aligned_cols=138 Identities=20% Similarity=0.329 Sum_probs=122.2
Q ss_pred CCCCCCCCCeEEeeecCCCceeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeC--CCHHH
Q 024201 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVST--DSVFS 155 (271)
Q Consensus 78 ~~~G~~~Pdf~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~--d~~~~ 155 (271)
..+|+++|+|++. +.+|+.+++++++|| ++||+|| ++||+.|+.+++.|.+++++++++++.+++|+. |+.+.
T Consensus 2 ~~~G~~~p~~~l~---~~~g~~~~l~~~~gk-~~lv~f~-~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~ 76 (153)
T 2l5o_A 2 SLDSKTAPAFSLP---DLHGKTVSNADLQGK-VTLINFW-FPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIES 76 (153)
T ss_dssp --CCTTCCSCEEE---CTTSCEEEHHHHTTC-EEEEEEE-CTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECTTSCHHH
T ss_pred CCCCCCCCCcEee---cCCCCCccHHHhCCC-EEEEEEE-CCCCccHHHHHHHHHHHHHHhccCCeEEEEEecCCCCHHH
Confidence 4589999999998 677889999999998 8999999 899999999999999999999988999999995 66778
Q ss_pred HHHHHHHhhhcCCCCCcccceEEcCChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHH
Q 024201 156 HLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l 235 (271)
.++|.+.+ +++|+++.|.+.++++.||+. .+|++||||++|+|+..+.+. .+.+++.+.|+.+
T Consensus 77 ~~~~~~~~-------~~~~~~~~d~~~~~~~~~~i~------~~P~~~lid~~G~i~~~~~g~----~~~~~l~~~l~~l 139 (153)
T 2l5o_A 77 VRQYVKDY-------GLPFTVMYDADKAVGQAFGTQ------VYPTSVLIGKKGEILKTYVGE----PDFGKLYQEIDTA 139 (153)
T ss_dssp HHHHHHHT-------TCCSEEEECSSCHHHHHHTCC------SSSEEEEECSSSCCCEEEESS----CCHHHHHHHHHHH
T ss_pred HHHHHHHc-------CCCceEEcCchHHHHHHcCCC------ccCeEEEECCCCcEEEEEcCC----CCHHHHHHHHHHH
Confidence 88898887 788999999999999999998 899999999999999887543 4678888888877
Q ss_pred HH
Q 024201 236 QY 237 (271)
Q Consensus 236 ~~ 237 (271)
..
T Consensus 140 l~ 141 (153)
T 2l5o_A 140 WR 141 (153)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 63
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.92 E-value=1.5e-24 Score=178.72 Aligned_cols=140 Identities=19% Similarity=0.234 Sum_probs=120.8
Q ss_pred CCCCCCCCCeEEeeecCC--CceeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCc------EEEEEe
Q 024201 78 PLVGNTAPDFAAEAVFDQ--EFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNT------EILGVS 149 (271)
Q Consensus 78 ~~~G~~~Pdf~l~~~~~~--~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv------~vv~VS 149 (271)
+.+|+++|+|++. +. +|+.++|++++|| ++||+|| ++||++|+.+++.|.+++++|+++|+ .||+|+
T Consensus 31 ~~~g~~~p~f~l~---~~~~~g~~~~l~~~~gk-~vlv~F~-a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~ 105 (183)
T 3lwa_A 31 EADRQQLPDIGGD---SLMEEGTQINLSDFENQ-VVILNAW-GQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGIN 105 (183)
T ss_dssp GGGCCCCCCCEEE---BSSSTTCEEEGGGGTTS-EEEEEEE-CTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEE
T ss_pred cccCCCCCceecc---ccccCCcEecHHHhCCC-EEEEEEE-CCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEE
Confidence 5679999999998 55 7889999999998 9999999 89999999999999999999999999 999999
Q ss_pred CCC--HHHHHHHHHHhhhcCCCCCcccceEEcCChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHH
Q 024201 150 TDS--VFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDE 227 (271)
Q Consensus 150 ~d~--~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e 227 (271)
.|. .+..++|.+++ +++|+++.|.+..+.+.|+.... ..+|++||||++|+|++.+.+. ...++
T Consensus 106 ~d~~~~~~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~v---~~~P~~~lid~~G~i~~~~~g~----~~~~~ 171 (183)
T 3lwa_A 106 VRDYSRDIAQDFVTDN-------GLDYPSIYDPPFMTAASLGGVPA---SVIPTTIVLDKQHRPAAVFLRE----VTSKD 171 (183)
T ss_dssp CSCCCHHHHHHHHHHT-------TCCSCEEECTTCGGGGGTTTCCT---TCCSEEEEECTTSCEEEEECSC----CCHHH
T ss_pred CCCCCHHHHHHHHHHc-------CCCccEEECCcchHHHHhccCCC---CCCCeEEEECCCCcEEEEEcCC----CCHHH
Confidence 987 77788898887 78999999999999999973211 1789999999999999987543 35778
Q ss_pred HHHHHHHHH
Q 024201 228 TLRTLQALQ 236 (271)
Q Consensus 228 ~l~~l~~l~ 236 (271)
+.+.|+.+.
T Consensus 172 l~~~l~~ll 180 (183)
T 3lwa_A 172 VLDVALPLV 180 (183)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 888887764
No 64
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.92 E-value=1.6e-24 Score=171.16 Aligned_cols=133 Identities=21% Similarity=0.343 Sum_probs=118.2
Q ss_pred CCCCCCCCCeEEeeecCCCceeEecc--cccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHH-HhcCcEEEEEeCCC-H
Q 024201 78 PLVGNTAPDFAAEAVFDQEFINVKLS--DYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEF-EKLNTEILGVSTDS-V 153 (271)
Q Consensus 78 ~~~G~~~Pdf~l~~~~~~~g~~v~Ls--d~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~-~~~gv~vv~VS~d~-~ 153 (271)
+.+|+++|+|++. +.+|+.++++ +++|| ++||+|| ++||++|+.+++.|.++++++ +++|+.+++|++|. .
T Consensus 5 ~~~g~~~p~~~l~---~~~g~~~~l~~~~~~gk-~vll~F~-~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~ 79 (148)
T 3fkf_A 5 VTVGKSAPYFSLP---NEKGEKLSRSAERFRNR-YLLLNFW-ASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDIDR 79 (148)
T ss_dssp CCTTSBCCCCCEE---BTTSCEECTTSTTTTTS-EEEEEEE-CGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSCH
T ss_pred ccCCCcCCCeEee---CCCCCEEeccccccCCc-EEEEEEE-CCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCCH
Confidence 7899999999998 6678899999 99998 9999999 999999999999999999999 88899999999986 4
Q ss_pred HHHHHHHHHhhhcCCCCCcccceEEcC---ChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHH
Q 024201 154 FSHLAWVQTDRKSGGLGDLKYPLIADI---TKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLR 230 (271)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~f~~l~D~---~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~ 230 (271)
+..++|.+.+ +++|+++.|. +..+++.||+. .+|++||||++|+|++... +.+++.+
T Consensus 80 ~~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~v~------~~P~~~lid~~G~i~~~~~-------~~~~l~~ 139 (148)
T 3fkf_A 80 EAWETAIKKD-------TLSWDQVCDFTGLSSETAKQYAIL------TLPTNILLSPTGKILARDI-------QGEALTG 139 (148)
T ss_dssp HHHHHHHHHT-------TCCSEEECCSCGGGCHHHHHTTCC------SSSEEEEECTTSBEEEESC-------CHHHHHH
T ss_pred HHHHHHHHHc-------CCCceEEEccCCcchHHHHhcCCC------CcCEEEEECCCCeEEEecC-------CHHHHHH
Confidence 4667777776 7899999998 67999999999 8999999999999999853 5677777
Q ss_pred HHHHH
Q 024201 231 TLQAL 235 (271)
Q Consensus 231 ~l~~l 235 (271)
.|+.+
T Consensus 140 ~l~~l 144 (148)
T 3fkf_A 140 KLKEL 144 (148)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77765
No 65
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.92 E-value=2.2e-24 Score=177.98 Aligned_cols=143 Identities=16% Similarity=0.274 Sum_probs=122.4
Q ss_pred CCCCCCCCCeEEeeecCCCceeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCH--HH
Q 024201 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSV--FS 155 (271)
Q Consensus 78 ~~~G~~~Pdf~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~--~~ 155 (271)
+.+|+.+|+|++. +.+|+.++|++++|| ++||+|| ++||++|+.+++.|.+++++|++++++||+|+.|.. +.
T Consensus 34 ~~~g~~~p~f~l~---~~~G~~~~l~~~~gk-~vll~F~-a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~ 108 (186)
T 1jfu_A 34 ASAPLKLPDLAFE---DADGKPKKLSDFRGK-TLLVNLW-ATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRDPEK 108 (186)
T ss_dssp CCSCCBCCCCEEE---CTTSCEEEGGGGTTS-EEEEEEE-CTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCCSCTTH
T ss_pred ccCCCcCCCcEeE---cCCCCEeeHHHcCCC-EEEEEEE-eCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCCCCHHH
Confidence 6789999999998 678889999999998 9999999 999999999999999999999988999999999864 56
Q ss_pred HHHHHHHhhhcCCCCCc-ccceEEcCChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHH
Q 024201 156 HLAWVQTDRKSGGLGDL-KYPLIADITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQA 234 (271)
Q Consensus 156 ~~~~~~~~~~~~~~~~~-~f~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~ 234 (271)
.++|.+++ ++ .|+++.|.+..+.+.|++.... ..+|++||||++|+|++.+.+.. ..+.+++++.|+.
T Consensus 109 ~~~~~~~~-------~~~~~~~~~d~~~~~~~~~~~~~~~--~~~P~~~lid~~G~i~~~~~g~~--~~~~~~l~~~l~~ 177 (186)
T 1jfu_A 109 PKTFLKEA-------NLTRLGYFNDQKAKVFQDLKAIGRA--LGMPTSVLVDPQGCEIATIAGPA--EWASEDALKLIRA 177 (186)
T ss_dssp HHHHHHHT-------TCCTTCCEECTTCHHHHHHHTTTCC--SSSSEEEEECTTSBEEEEEESCC--CTTSHHHHHHHHH
T ss_pred HHHHHHHc-------CCCCCceEECCcchHHHHhcccccc--CCCCEEEEECCCCCEEEEEecCC--ccCHHHHHHHHHH
Confidence 78888887 55 5899999999999999985321 25899999999999999976542 2245778888877
Q ss_pred HH
Q 024201 235 LQ 236 (271)
Q Consensus 235 l~ 236 (271)
+.
T Consensus 178 ll 179 (186)
T 1jfu_A 178 AT 179 (186)
T ss_dssp HH
T ss_pred Hh
Confidence 64
No 66
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=99.92 E-value=1.6e-24 Score=178.10 Aligned_cols=135 Identities=19% Similarity=0.314 Sum_probs=113.7
Q ss_pred CcCCCCCCCCCCeEEeeecCCCc--eeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeC-C
Q 024201 75 EIPPLVGNTAPDFAAEAVFDQEF--INVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVST-D 151 (271)
Q Consensus 75 ~~~~~~G~~~Pdf~l~~~~~~~g--~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~-d 151 (271)
...+.+|+++|+|++.+ .+| +.+++++++|| ++||+|| ++|||+|+.+++.|.+++++ |+.||+|++ |
T Consensus 27 ~~~~~~G~~~P~f~l~~---~~g~~~~~~l~~~~gk-~vll~F~-a~~C~~C~~~~~~l~~l~~~----~v~vv~vs~~d 97 (176)
T 3kh7_A 27 LPSALIGKPFPAFDLPS---VQDPARRLTEADLKGK-PALVNVW-GTWCPSCRVEHPELTRLAEQ----GVVIYGINYKD 97 (176)
T ss_dssp STTTTTTSBCCCCEEEB---SSCTTSEEEGGGGCSS-CEEEEEE-CTTCHHHHHHHHHHHHHHHT----TCEEEEEEESC
T ss_pred ccccccCCcCCCcEecc---cCCCCceecHHHhCCC-EEEEEEE-CCcCHHHHHHHHHHHHHHHC----CCEEEEEeCCC
Confidence 34478999999999984 444 79999999998 8999999 99999999999999998876 799999995 6
Q ss_pred CHHHHHHHHHHhhhcCCCCCcccc-eEEcCChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHH
Q 024201 152 SVFSHLAWVQTDRKSGGLGDLKYP-LIADITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLR 230 (271)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~f~-~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~ 230 (271)
+.+..++|.+.+ +++|+ ++.|.+.++++.||+. .+|++||||++|+|++.+.+.. +.+++.+
T Consensus 98 ~~~~~~~~~~~~-------~~~~~~~~~d~~~~~~~~~~v~------~~P~~~lid~~G~i~~~~~g~~----~~~~l~~ 160 (176)
T 3kh7_A 98 DNAAAIKWLNEL-------HNPYLLSISDADGTLGLDLGVY------GAPETYLIDKQGIIRHKIVGVV----DQKVWRE 160 (176)
T ss_dssp CHHHHHHHHHHT-------TCCCSEEEEETTCHHHHHHTCC------SSCEEEEECTTCBEEEEEESCC----CHHHHHH
T ss_pred CHHHHHHHHHHc-------CCCCceEEECCcchHHHHcCCC------CCCeEEEECCCCeEEEEEcCCC----CHHHHHH
Confidence 677778888887 67887 5889999999999999 8999999999999999976543 3455555
Q ss_pred HHHHH
Q 024201 231 TLQAL 235 (271)
Q Consensus 231 ~l~~l 235 (271)
.|+.+
T Consensus 161 ~l~~~ 165 (176)
T 3kh7_A 161 QLAPL 165 (176)
T ss_dssp HTHHH
T ss_pred HHHHH
Confidence 55443
No 67
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=99.92 E-value=7.4e-25 Score=183.97 Aligned_cols=160 Identities=17% Similarity=0.202 Sum_probs=113.8
Q ss_pred CCCCCCC--CCeEEeeecCCCceeEecccccCCcEEEEEEecCCCCCC-hHHHHHHHHHHHHHHHhc---CcEEEEEeCC
Q 024201 78 PLVGNTA--PDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFV-CPTEITAFSDRYTEFEKL---NTEILGVSTD 151 (271)
Q Consensus 78 ~~~G~~~--Pdf~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~-C~~~l~~L~~~~~~~~~~---gv~vv~VS~d 151 (271)
..+|+++ |+|++. +.+|+.+++++++|| ++||+|| ++|||. |+.+++.|.++++++.++ +++||+||+|
T Consensus 13 ~~~g~~~~~p~f~l~---d~~G~~v~l~~~~Gk-~vlv~F~-at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D 87 (200)
T 2b7k_A 13 RGYGKPSLGGPFHLE---DMYGNEFTEKNLLGK-FSIIYFG-FSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCD 87 (200)
T ss_dssp ---CCCCCCCCCEEE---ETTSCEEEGGGGTTS-CEEEEEE-CTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESC
T ss_pred hccCCCCcCCCEEEE---cCCCCEEeHHHcCCC-EEEEEEE-CCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECC
Confidence 5678886 999998 677889999999998 9999999 999997 999999999999999864 8999999998
Q ss_pred ----CHHHHHHHHHHhhhcCCCCCcccceEEcC---ChHHHHHhCCccCC-----CC-----ccceEEEEEcCCCcEEEE
Q 024201 152 ----SVFSHLAWVQTDRKSGGLGDLKYPLIADI---TKSISKSYGVLIPD-----QG-----IALRGLFIIDKEGVIQHS 214 (271)
Q Consensus 152 ----~~~~~~~~~~~~~~~~~~~~~~f~~l~D~---~~~~~~~ygv~~~~-----~g-----~~~P~~~lID~~G~V~~~ 214 (271)
+++.+++|++.+ +.+|+.+.+. ...+++.||+.... .| .+.|++||||++|+|+..
T Consensus 88 ~~~d~~~~~~~~~~~~-------~~~~~~l~~~~d~~~~~~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i~~~ 160 (200)
T 2b7k_A 88 PARDSPAVLKEYLSDF-------HPSILGLTGTFDEVKNACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQFVDA 160 (200)
T ss_dssp TTTCCHHHHHHHHTTS-------CTTCEEEECCHHHHHHHHHHTTC--------------CTTTCCCEEEECTTSCEEEE
T ss_pred CCCCCHHHHHHHHHHc-------CCCceEEeCCHHHHHHHHHHcCcEEeeccccCCCCCceeeecceEEEECCCCcEEEE
Confidence 467778888776 6678877643 47889999997311 01 256789999999999999
Q ss_pred EeccCCCCCCHHHHHHHHHHHHHhhhCCCcccCCCCC
Q 024201 215 TINNLAIGRSVDETLRTLQALQYVQENPDEVCPAGWK 251 (271)
Q Consensus 215 ~~~~~~~~~~~~e~l~~l~~l~~~~~~~~~~~p~~~~ 251 (271)
+.+........+++.+.|+.++.. +. .+.|+..|-
T Consensus 161 ~~g~~~~~~~~~~i~~~l~~l~~~-~~-~~~~~~~~~ 195 (200)
T 2b7k_A 161 LGRNYDEKTGVDKIVEHVKSYVPA-EQ-RAKQKEAWY 195 (200)
T ss_dssp ECTTCCTTHHHHHHHHHHHHCCCC-------------
T ss_pred eCCCCCHHHHHHHHHHHHHHhhhh-hh-cchhHHHHH
Confidence 765444444455666666655432 22 567899994
No 68
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.92 E-value=8.6e-25 Score=175.98 Aligned_cols=137 Identities=21% Similarity=0.396 Sum_probs=121.2
Q ss_pred CCCCCCCCCeEEeeecCCCceeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHH
Q 024201 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHL 157 (271)
Q Consensus 78 ~~~G~~~Pdf~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~ 157 (271)
+.+|+++|+|++. +.+|+.+++++++|| ++||+|| ++||+.|+.+++.|.++++++++.++.+|+|+.|. ...
T Consensus 15 ~~~G~~~p~f~l~---~~~g~~~~l~~~~gk-~vll~F~-~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~--~~~ 87 (158)
T 3hdc_A 15 VRTGALAPNFKLP---TLSGENKSLAQYRGK-IVLVNFW-ASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEK--RFP 87 (158)
T ss_dssp CCTTSBCCCCEEE---CTTSCEEESGGGTTS-EEEEEEE-CTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSS--SCC
T ss_pred cCCCCcCCCceeE---cCCCCEEehHHhCCC-EEEEEEE-CCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCH--HHH
Confidence 7899999999998 677889999999998 9999999 99999999999999999999998899999999998 556
Q ss_pred HHHHHhhhcCCCCCcccceEEcCChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHHH
Q 024201 158 AWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQ 236 (271)
Q Consensus 158 ~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l~ 236 (271)
+|.+.+ +++|+++.|.+.++.+.|++. .+|++||||++|+|++.+.+... .+.+++++.+.+.+
T Consensus 88 ~~~~~~-------~~~~~~~~d~~~~~~~~~~v~------~~P~~~lid~~G~i~~~~~G~~~--~~~~~~~~~~~~~~ 151 (158)
T 3hdc_A 88 EKYRRA-------PVSFNFLSDATGQVQQRYGAN------RLPDTFIVDRKGIIRQRVTGGIE--WDAPKVVSYLKSLE 151 (158)
T ss_dssp GGGGGC-------CCSCEEEECTTSHHHHHTTCC------SSSEEEEECTTSBEEEEEESCCC--TTSHHHHHHHHTTC
T ss_pred HHHHHc-------CCCceEEECchHHHHHHhCCC------CcceEEEEcCCCCEEEEEeCCCc--cchHHHHHHHHhhc
Confidence 666665 789999999999999999999 89999999999999999876533 34577777776654
No 69
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=99.92 E-value=1.7e-24 Score=175.36 Aligned_cols=141 Identities=13% Similarity=0.134 Sum_probs=109.5
Q ss_pred CCCCCCCCCeEEeeecCCCceeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCC------
Q 024201 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTD------ 151 (271)
Q Consensus 78 ~~~G~~~Pdf~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d------ 151 (271)
+++|+.+|+|++. +.+|+.+++++++|| ++||+|| ++|||+|+.+++.|++++++|+++|++||+|++|
T Consensus 5 ~~~g~~~p~f~l~---~~~G~~~~l~~~~gk-~vlv~f~-a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~ 79 (169)
T 2v1m_A 5 HKSWNSIYEFTVK---DINGVDVSLEKYRGH-VCLIVNV-ACKCGATDKNYRQLQEMHTRLVGKGLRILAFPCNQFGGQE 79 (169)
T ss_dssp --CCCSGGGCEEE---BTTSCEEEGGGGTTS-EEEEEEE-CSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCC
T ss_pred ccCCcccccceee---cCCCCCccHHHcCCC-EEEEEEe-eccCCchHHHHHHHHHHHHHhhcCCeEEEEEECCccCCCC
Confidence 5689999999998 677889999999998 9999999 8999999999999999999999999999999986
Q ss_pred --CHHHHHHH-HHHhhhcCCCCCcccceEE--cCChHHHH-Hh--------CCccCCCCccceEEEEEcCCCcEEEEEec
Q 024201 152 --SVFSHLAW-VQTDRKSGGLGDLKYPLIA--DITKSISK-SY--------GVLIPDQGIALRGLFIIDKEGVIQHSTIN 217 (271)
Q Consensus 152 --~~~~~~~~-~~~~~~~~~~~~~~f~~l~--D~~~~~~~-~y--------gv~~~~~g~~~P~~~lID~~G~V~~~~~~ 217 (271)
+.+.+++| .+.+ +++|+++. |.++..+. .| |+.... -.++|++||||++|+|++++.+
T Consensus 80 ~~~~~~~~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~-i~~~P~~~lid~~G~i~~~~~g 151 (169)
T 2v1m_A 80 PWAEAEIKKFVTEKY-------GVQFDMFSKIKVNGSDADDLYKFLKSRQHGTLTNN-IKWNFSKFLVDRQGQPVKRYSP 151 (169)
T ss_dssp CSCHHHHHHHHHHHH-------CCCSEEBCCCCCSSTTSCHHHHHHHHHSCCSSSCS-CCSTTCEEEECTTSCEEEEECT
T ss_pred CCCHHHHHHHHHHhc-------CCCCceEEEEeecCccccHHHHHHHhhcCCccCCc-ccccceEEEECCCCCEEEEcCC
Confidence 35677888 4777 78899986 66554332 23 533100 0046899999999999999765
Q ss_pred cCCCCCCHHHHHHHHHHH
Q 024201 218 NLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 218 ~~~~~~~~~e~l~~l~~l 235 (271)
... .+++.+.|+.+
T Consensus 152 ~~~----~~~l~~~i~~l 165 (169)
T 2v1m_A 152 TTA----PYDIEGDIMEL 165 (169)
T ss_dssp TSC----GGGGHHHHHHH
T ss_pred CCC----HHHHHHHHHHH
Confidence 432 34556666554
No 70
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=99.92 E-value=9e-25 Score=180.36 Aligned_cols=136 Identities=14% Similarity=0.125 Sum_probs=108.2
Q ss_pred CCCCCCCCCeEEeeecCCCceeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCC------
Q 024201 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTD------ 151 (271)
Q Consensus 78 ~~~G~~~Pdf~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d------ 151 (271)
+++|+++|+|++. +.+|+.+++++++|| ++||+|| ++|||+|+.++|.|++++++|+++|++||+|++|
T Consensus 23 ~~~g~~~p~f~l~---~~~G~~~~l~~~~Gk-~vlv~F~-atwC~~C~~~~p~l~~l~~~~~~~~v~vv~vs~d~~~~~e 97 (181)
T 2p31_A 23 MQQEQDFYDFKAV---NIRGKLVSLEKYRGS-VSLVVNV-ASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQE 97 (181)
T ss_dssp ----CCGGGCEEE---BTTSCEEEGGGGTTS-EEEEEEE-CSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCC
T ss_pred CCcCCccCceEee---cCCCCEecHHHcCCC-EEEEEEe-ccCCCCcHHHHHHHHHHHHHhhcCCEEEEEEECcCCCCCC
Confidence 7799999999998 677889999999998 9999999 9999999999999999999999999999999986
Q ss_pred --CHHHHHHHHHH-hhhcCCCCCcccceEEc--CChHHHH---HhCCccCCCCccce-------EEEEEcCCCcEEEEEe
Q 024201 152 --SVFSHLAWVQT-DRKSGGLGDLKYPLIAD--ITKSISK---SYGVLIPDQGIALR-------GLFIIDKEGVIQHSTI 216 (271)
Q Consensus 152 --~~~~~~~~~~~-~~~~~~~~~~~f~~l~D--~~~~~~~---~ygv~~~~~g~~~P-------~~~lID~~G~V~~~~~ 216 (271)
+.+..++|.++ + +++|+++.| .++.... .|++. .+| ++||||++|+|++.+.
T Consensus 98 ~~~~~~~~~~~~~~~-------~~~~p~~~~~d~~g~~~~~~~~~~~~------~~P~~~~~~~~~~lid~~G~i~~~~~ 164 (181)
T 2p31_A 98 PDSNKEIESFARRTY-------SVSFPMFSKIAVTGTGAHPAFKYLAQ------TSGKEPTWNFWKYLVAPDGKVVGAWD 164 (181)
T ss_dssp CSCHHHHHHHHHHHH-------CCCSCBBCCCCCSSTTSCHHHHHHHH------HHSCCCCSTTCEEEECTTSCEEEEEC
T ss_pred CCCHHHHHHHHHhhc-------CCCceeEeecccCCccchhhhhhhhh------cCCCccccceeEEEEcCCCCEEEEeC
Confidence 46777888887 6 778999864 4433222 34444 566 8999999999999975
Q ss_pred ccCCCCCCHHHHHHHHHHH
Q 024201 217 NNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 217 ~~~~~~~~~~e~l~~l~~l 235 (271)
+. .+.+++.+.|+++
T Consensus 165 g~----~~~~~l~~~i~~l 179 (181)
T 2p31_A 165 PT----VSVEEVRPQITAL 179 (181)
T ss_dssp TT----SCHHHHHHHHHTT
T ss_pred CC----CCHHHHHHHHHHH
Confidence 43 2456777777654
No 71
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.92 E-value=1.1e-24 Score=174.71 Aligned_cols=132 Identities=19% Similarity=0.299 Sum_probs=110.5
Q ss_pred CCCCCCCCCeEEeeecCCCceeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHH
Q 024201 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHL 157 (271)
Q Consensus 78 ~~~G~~~Pdf~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~ 157 (271)
...|+++|+|++. +.+|+.++|++++|| ++||+|| ++|||+|+.+++.|.+++++|+++|++||+|+.|+..+
T Consensus 9 ~~~g~~~p~f~l~---~~~G~~~~l~~~~gk-~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~~~~-- 81 (152)
T 2lrt_A 9 KIKEASIIDIQLK---DLKGNTRSLTDLKGK-VVLIDFT-VYNNAMSAAHNLALRELYNKYASQGFEIYQISLDGDEH-- 81 (152)
T ss_dssp SSCTTCSCCCCEE---BTTSCEECTTTGGGS-EEEEEEE-CTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSCCHH--
T ss_pred hccCCCCCCeEEE---cCCCCEEeHHHhCCC-EEEEEEE-cCCChhhHHHHHHHHHHHHHhccCCeEEEEEEccCCHH--
Confidence 4579999999998 677889999999998 9999999 89999999999999999999999999999999997542
Q ss_pred HHHHHhhhcCCCCCcccceEEcCChH---HHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHH
Q 024201 158 AWVQTDRKSGGLGDLKYPLIADITKS---ISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTL 232 (271)
Q Consensus 158 ~~~~~~~~~~~~~~~~f~~l~D~~~~---~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l 232 (271)
.|.+.. . +++|+++.|.++. +++.||+. .+|++||||++|+|++.+.+. .+.++.+..+
T Consensus 82 ~~~~~~-~-----~~~~~~~~d~~~~~~~~~~~~~v~------~~P~~~lid~~G~i~~~~~g~----~~~e~~~~~~ 143 (152)
T 2lrt_A 82 FWKTSA-D-----NLPWVCVRDANGAYSSYISLYNVT------NLPSVFLVNRNNELSARGENI----KDLDEAIKKL 143 (152)
T ss_dssp HHHHHH-T-----TCSSEEEECSSGGGCHHHHHHTCC------SCSEEEEEETTTEEEEETTTC----SCHHHHHHHH
T ss_pred HHHHHH-h-----CCCceEEECCCCcchHHHHHcCcc------cCceEEEECCCCeEEEecCCH----HHHHHHHHHH
Confidence 222221 1 4689999999986 99999998 899999999999999986542 4455555443
No 72
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.92 E-value=1.2e-23 Score=169.46 Aligned_cols=142 Identities=15% Similarity=0.265 Sum_probs=119.7
Q ss_pred CCCCCCCCCeEEeeecCCCceeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCC-HHHH
Q 024201 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDS-VFSH 156 (271)
Q Consensus 78 ~~~G~~~Pdf~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~-~~~~ 156 (271)
+.+|+++|+|++. +.+|+.+++++++|| ++||+|| ++|||.|+.+++.|.+++++++++|+.+|+|+.|. ....
T Consensus 8 ~~~g~~~p~~~l~---~~~g~~~~l~~~~gk-~vlv~f~-~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~~~~~~ 82 (165)
T 3or5_A 8 DARPTPAPSFSGV---TVDGKPFSSASLKGK-AYIVNFF-ATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNEQLPNV 82 (165)
T ss_dssp CCCCCBCCCCEEE---CTTSCEEEGGGGTTC-EEEEEEE-CTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSCCHHHH
T ss_pred hcCCCCCCCceee---CCCCCEechhHcCCC-EEEEEEE-cCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHH
Confidence 6789999999998 677889999999998 9999999 99999999999999999999999899999999986 6677
Q ss_pred HHHHHHhhhcCCCCCcccceEEcCChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHHH
Q 024201 157 LAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQ 236 (271)
Q Consensus 157 ~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l~ 236 (271)
++|.+++ +++|+++.|.+ ++.+.|+.........+|++||||++|+|+..+.+. ...+++.+.|+.+.
T Consensus 83 ~~~~~~~-------~~~~~~~~~~~-~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~----~~~~~l~~~l~~~l 150 (165)
T 3or5_A 83 KNYMKTQ-------GIIYPVMMATP-ELIRAFNGYIDGGITGIPTSFVIDASGNVSGVIVGP----RSKADFDRIVKMAL 150 (165)
T ss_dssp HHHHHHH-------TCCSCEEECCH-HHHHHHHTTSTTCSCSSSEEEEECTTSBEEEEECSC----CCHHHHHHHHHHHH
T ss_pred HHHHHHc-------CCCCceEecCH-HHHHHHhhhhccCCCCCCeEEEECCCCcEEEEEcCC----CCHHHHHHHHHHHH
Confidence 8888887 78999999865 899999432111111799999999999999987543 35678888887764
No 73
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=99.91 E-value=1.5e-24 Score=179.09 Aligned_cols=140 Identities=16% Similarity=0.086 Sum_probs=110.3
Q ss_pred CCCCCCCCCeEEeeecCCCceeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCC------
Q 024201 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTD------ 151 (271)
Q Consensus 78 ~~~G~~~Pdf~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d------ 151 (271)
+++|+.+|+|++. +.+|+.++|++++|| ++||+|| ++|||+|+.+++.|.+++++|+++|++||+|++|
T Consensus 21 ~~~g~~~p~f~l~---~~~G~~~~l~~~~gk-~vll~F~-atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~e 95 (183)
T 2obi_A 21 WRCARSMHEFSAK---DIDGHMVNLDKYRGF-VCIVTNV-ASQCGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQE 95 (183)
T ss_dssp GGGCCSGGGCEEE---BTTSCEEEGGGGTTS-EEEEEEE-CSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCC
T ss_pred CcccCcccceEEE---cCCCCEeeHHHcCCC-EEEEEEe-CCCCCCcHHHHHHHHHHHHHHhcCCeEEEEEECCCCCCCC
Confidence 7799999999998 677889999999998 9999999 8999999999999999999999999999999986
Q ss_pred --CHHHHHHHHHHhhhcCCCCCcccceEE--cCChHHH----HHh-------CCccCCCCccceEEEEEcCCCcEEEEEe
Q 024201 152 --SVFSHLAWVQTDRKSGGLGDLKYPLIA--DITKSIS----KSY-------GVLIPDQGIALRGLFIIDKEGVIQHSTI 216 (271)
Q Consensus 152 --~~~~~~~~~~~~~~~~~~~~~~f~~l~--D~~~~~~----~~y-------gv~~~~~g~~~P~~~lID~~G~V~~~~~ 216 (271)
+.+..++|.+.+ +++|+++. |.++..+ +.+ |+... .--++|++||||++|+|++++.
T Consensus 96 ~~~~~~~~~~~~~~-------~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~-~i~~~P~~~lid~~G~i~~~~~ 167 (183)
T 2obi_A 96 PGSNEEIKEFAAGY-------NVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGN-AIKWNFTKFLIDKNGCVVKRYG 167 (183)
T ss_dssp CSCHHHHHHHHHTT-------TCCSEEBCCCCCSSTTSCHHHHHHHTSTTTCCSSSS-SCCSTTCEEEECTTSCEEEEEC
T ss_pred CCCHHHHHHHHHHc-------CCCceEEeeeccCCcchhHHHHHhhccCCCCCcccc-cccccceEEEECCCCCEEEEeC
Confidence 467778888876 78899987 6655433 222 33200 0014699999999999999975
Q ss_pred ccCCCCCCHHHHHHHHHH
Q 024201 217 NNLAIGRSVDETLRTLQA 234 (271)
Q Consensus 217 ~~~~~~~~~~e~l~~l~~ 234 (271)
+.. ..+++.+.|+.
T Consensus 168 g~~----~~~~l~~~i~~ 181 (183)
T 2obi_A 168 PME----EPLVIEKDLPH 181 (183)
T ss_dssp TTS----CTHHHHTTSGG
T ss_pred CCC----CHHHHHHHHHH
Confidence 432 33555555443
No 74
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=99.91 E-value=4.3e-24 Score=176.02 Aligned_cols=144 Identities=13% Similarity=0.105 Sum_probs=111.8
Q ss_pred CCCCCCCCeEEeeecCCCceeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCC-------
Q 024201 79 LVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTD------- 151 (271)
Q Consensus 79 ~~G~~~Pdf~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d------- 151 (271)
.+|+.+|+|++. +.+|+.+++++++|| ++||+|| ++|||+|+.++|.|++++++|+++|+.||+|++|
T Consensus 13 ~~~~~~p~f~l~---d~~G~~v~l~~~~Gk-~vlv~F~-atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~~~ 87 (180)
T 3kij_A 13 PKINSFYAFEVK---DAKGRTVSLEKYKGK-VSLVVNV-ASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEP 87 (180)
T ss_dssp CCCCCGGGCEEE---BTTSCEEEGGGGTTS-EEEEEEE-CSSSTTHHHHHHHHHHHHHHHTTTSEEEEEEECCCSTTCCC
T ss_pred CCcCcccceEEe---cCCCCEecHHHcCCC-EEEEEEE-ecCCCCcHHHHHHHHHHHHHhccCCeEEEEEECCccccCCC
Confidence 479999999998 778889999999998 9999999 9999999999999999999999999999999975
Q ss_pred -CHHHHHHHHHH-hhhcCCCCCcccceEEcCC--hH---HHHHhCCccCCCCccceE----EEEEcCCCcEEEEEeccCC
Q 024201 152 -SVFSHLAWVQT-DRKSGGLGDLKYPLIADIT--KS---ISKSYGVLIPDQGIALRG----LFIIDKEGVIQHSTINNLA 220 (271)
Q Consensus 152 -~~~~~~~~~~~-~~~~~~~~~~~f~~l~D~~--~~---~~~~ygv~~~~~g~~~P~----~~lID~~G~V~~~~~~~~~ 220 (271)
+.+..++|.+. + +++|+++.+.+ +. ....|... ..| ..|+ +||||++|+|++.+.+...
T Consensus 88 d~~~~~~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~~--~~~-~~p~~~~~~~lid~~G~i~~~~~g~~~ 157 (180)
T 3kij_A 88 RPSKEVESFARKNY-------GVTFPIFHKIKILGSEGEPAFRFLVD--SSK-KEPRWNFWKYLVNPEGQVVKFWRPEEP 157 (180)
T ss_dssp SCHHHHHHHHHHHH-------CCCSCBBCCCCCSSTTCCHHHHHHHH--HHT-CCCSSTTCEEEECTTSCEEEEECTTCC
T ss_pred CCHHHHHHHHHHhc-------CCCCceeeeeeccCccccHHHHHHHh--cCC-CCccccceEEEECCCCCEEEEECCCCC
Confidence 56778889888 7 78888876332 11 11111111 000 3566 9999999999999877655
Q ss_pred CCCCHHHHHHHHHHHHH
Q 024201 221 IGRSVDETLRTLQALQY 237 (271)
Q Consensus 221 ~~~~~~e~l~~l~~l~~ 237 (271)
.....+++.+.|++++.
T Consensus 158 ~~~l~~~i~~lL~~~~~ 174 (180)
T 3kij_A 158 IEVIRPDIAALVRQVII 174 (180)
T ss_dssp GGGTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 55555666666666553
No 75
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=99.91 E-value=3.1e-24 Score=173.91 Aligned_cols=138 Identities=17% Similarity=0.287 Sum_probs=106.6
Q ss_pred CCCCCCCCCeEEeeecCCCceeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCC------
Q 024201 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTD------ 151 (271)
Q Consensus 78 ~~~G~~~Pdf~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d------ 151 (271)
+.+|+++|+|++. +.+|+.+++++++|| ++||+|| ++||++|+.+++.|++++++|+++|++||+|++|
T Consensus 6 ~~~g~~~p~f~l~---~~~g~~~~l~~~~gk-~vll~f~-a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~ 80 (170)
T 2p5q_A 6 SKNPESVHDFTVK---DAKENDVDLSIFKGK-VLLIVNV-ASKCGMTNSNYAEMNQLYEKYKDQGLEILAFPCNQFGEEE 80 (170)
T ss_dssp ----CCGGGCEEE---BTTSCEEEGGGGTTS-EEEEEEE-CSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCC
T ss_pred CCCCccccceEEE---cCCCCEecHHHhCCC-EEEEEEE-eccCCccHHHHHHHHHHHHHhccCCEEEEEEECCCCCCCC
Confidence 6789999999998 677889999999998 9999999 8999999999999999999999999999999986
Q ss_pred --CHHHHHHHHH-HhhhcCCCCCcccceE--EcCChHHH----H-----HhCCccCCCCccce---EEEEEcCCCcEEEE
Q 024201 152 --SVFSHLAWVQ-TDRKSGGLGDLKYPLI--ADITKSIS----K-----SYGVLIPDQGIALR---GLFIIDKEGVIQHS 214 (271)
Q Consensus 152 --~~~~~~~~~~-~~~~~~~~~~~~f~~l--~D~~~~~~----~-----~ygv~~~~~g~~~P---~~~lID~~G~V~~~ 214 (271)
+.+..++|.+ .+ +++|+++ .|.++.++ + .+|+. +..+| ++||||++|+|+++
T Consensus 81 ~~~~~~~~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~----~~~~p~~~~~~lid~~G~i~~~ 149 (170)
T 2p5q_A 81 PGTNDQITDFVCTRF-------KSEFPIFDKIDVNGENASPLYRFLKLGKWGIF----GDDIQWNFAKFLVNKDGQVVDR 149 (170)
T ss_dssp CSCHHHHHHHHHHHT-------CCCSCBBCCCBSSSTTBCHHHHHHHTHHHHTT----CSCCCSTTCEEEECTTSCEEEE
T ss_pred CCCHHHHHHHHHHhc-------CCCceeEeeeccCCCchHHHHHHHHhcCCCcc----CCcccccccEEEECCCCCEEEe
Confidence 4667788888 55 6789988 56665432 1 23551 00456 99999999999999
Q ss_pred EeccCCCCCCHHHHHHHHHHH
Q 024201 215 TINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 215 ~~~~~~~~~~~~e~l~~l~~l 235 (271)
+.+.. +.+++.+.|+.+
T Consensus 150 ~~g~~----~~~~l~~~i~~l 166 (170)
T 2p5q_A 150 YYPTT----SPLSLERDIKQL 166 (170)
T ss_dssp ECTTS----CGGGGHHHHHHH
T ss_pred eCCCC----CHHHHHHHHHHH
Confidence 76532 234555566554
No 76
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.91 E-value=7e-24 Score=169.24 Aligned_cols=134 Identities=14% Similarity=0.187 Sum_probs=112.9
Q ss_pred CCCCeEEeeecCCCceeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHH
Q 024201 83 TAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQT 162 (271)
Q Consensus 83 ~~Pdf~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~ 162 (271)
++|+|.+ ..+|+.++|++++|| ++||+|| ++|||+|+.++|.|.+++++|+++++.||+|++|+.+...+|.+.
T Consensus 4 pa~~~~~----~~~G~~~~l~~~~gk-~vlv~F~-a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~~~~~ 77 (151)
T 3raz_A 4 SADELAG----WKDNTPQSLQSLKAP-VRIVNLW-ATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQ 77 (151)
T ss_dssp ---CEEE----TTTCCEECGGGCCSS-EEEEEEE-CTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESSCHHHHHHHHHH
T ss_pred Ccchhhc----ccCCCEecHHHhCCC-EEEEEEE-cCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCChHHHHHHHHH
Confidence 3445544 267889999999998 9999999 999999999999999999999888999999999999999999998
Q ss_pred hhhcCCCCCcccceEEcCC---hHHHHHhC--CccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHHHH
Q 024201 163 DRKSGGLGDLKYPLIADIT---KSISKSYG--VLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQY 237 (271)
Q Consensus 163 ~~~~~~~~~~~f~~l~D~~---~~~~~~yg--v~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l~~ 237 (271)
+ +++|+++.|.. .++++.|| +. .+|++||||++|+|++.+.+. ...+++.+.|+.+..
T Consensus 78 ~-------~~~~~~~~~~~~~~~~~~~~~~~~v~------~~P~~~lid~~G~i~~~~~g~----~~~~~l~~~l~~l~~ 140 (151)
T 3raz_A 78 T-------PVSYPIWRYTGANSRNFMKTYGNTVG------VLPFTVVEAPKCGYRQTITGE----VNEKSLTDAVKLAHS 140 (151)
T ss_dssp S-------CCSSCEEEECCSCHHHHHHTTTCCSC------CSSEEEEEETTTTEEEECCSC----CCHHHHHHHHHHHHT
T ss_pred c-------CCCCceEecCccchHHHHHHhCCccC------CCCEEEEECCCCcEEEEECCC----CCHHHHHHHHHHHHH
Confidence 7 78999998774 67889999 66 799999999999999987543 356788888887754
Q ss_pred hh
Q 024201 238 VQ 239 (271)
Q Consensus 238 ~~ 239 (271)
.+
T Consensus 141 ~~ 142 (151)
T 3raz_A 141 KC 142 (151)
T ss_dssp C-
T ss_pred Hh
Confidence 43
No 77
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.91 E-value=9.8e-24 Score=165.86 Aligned_cols=132 Identities=15% Similarity=0.317 Sum_probs=113.9
Q ss_pred CCCCCCCCCeEEeeecCCCceeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCC----CH
Q 024201 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTD----SV 153 (271)
Q Consensus 78 ~~~G~~~Pdf~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d----~~ 153 (271)
+.+|+.+|+|++. +.+|+.+++++ +|| ++||+|| ++||++|+.+++.|.++++++++.++.+++|++| +.
T Consensus 9 ~~~g~~~p~~~l~---~~~g~~~~l~~-~gk-~~ll~f~-~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~ 82 (145)
T 3erw_A 9 EKQPAVPAVFLMK---TIEGEDISIPN-KGQ-KTILHFW-TSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVNSEQNQ 82 (145)
T ss_dssp ---CCSCCEEEEE---CTTSCEEEESC-TTS-EEEEEEE-CSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGGGSSCH
T ss_pred ccCCCcCCCceee---cCCCCEEeHHH-CCC-EEEEEEE-CCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccCCcCCH
Confidence 6789999999998 66788999999 888 9999999 9999999999999999999998779999999996 56
Q ss_pred HHHHHHHHHhhhcCCCCCcccceEEcCChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHH
Q 024201 154 FSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTL 232 (271)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l 232 (271)
+..++|.+.+ +++|+++.|.+.++++.|++. .+|++||||++|+|+..+.+. ...+++.+.|
T Consensus 83 ~~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~v~------~~P~~~lid~~G~i~~~~~g~----~~~~~l~~~l 144 (145)
T 3erw_A 83 QVVEDFIKAN-------KLTFPIVLDSKGELMKEYHII------TIPTSFLLNEKGEIEKTKIGP----MTAEQLKEWT 144 (145)
T ss_dssp HHHHHHHHHT-------TCCSCEEECSSSHHHHHTTCC------EESEEEEECTTCCEEEEEESC----CCHHHHHHHH
T ss_pred HHHHHHHHHc-------CCceeEEEcCchhHHHhcCcC------ccCeEEEEcCCCcEEEEEcCC----cCHHHHHHhh
Confidence 6777888776 789999999999999999999 899999999999999987653 3455665554
No 78
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=99.91 E-value=5.7e-24 Score=174.08 Aligned_cols=147 Identities=12% Similarity=0.095 Sum_probs=116.4
Q ss_pred CCCCCCC-CeEEeeecCCCceeEecccccCCcEEEEEEecCCCCC-ChHHHHHHHHHHHHHHHh--cCcEEEEEeCC---
Q 024201 79 LVGNTAP-DFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTF-VCPTEITAFSDRYTEFEK--LNTEILGVSTD--- 151 (271)
Q Consensus 79 ~~G~~~P-df~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp-~C~~~l~~L~~~~~~~~~--~gv~vv~VS~d--- 151 (271)
.+|+++| +|++. +.+|+.++|++++|| ++||+|| ++||| .|+.+++.|+++++++++ .++++|+||+|
T Consensus 2 ~~G~~~P~~f~l~---d~~G~~v~l~~~~Gk-~vll~F~-~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~~d 76 (170)
T 3me7_A 2 SLGTYVPGDITLV---DSYGNEFQLKNLKGK-PIILSPI-YTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDPKD 76 (170)
T ss_dssp CTTCBCCTTCEEE---ETTCCEEEGGGGTTS-CEEEEEE-CTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCTTC
T ss_pred CCCCcCCCCeEEE---cCCcCEEchHHhCCC-EEEEEEE-CCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCCCC
Confidence 5899999 99998 678889999999998 8999999 89998 699999999999999975 46999999987
Q ss_pred CHHHHHHHHHHhhhcCCCCCcccceEE--c--CChHHHHHhCCccCC--C-CccceEEEEEcCCCcEEEEEeccCCCCCC
Q 024201 152 SVFSHLAWVQTDRKSGGLGDLKYPLIA--D--ITKSISKSYGVLIPD--Q-GIALRGLFIIDKEGVIQHSTINNLAIGRS 224 (271)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~f~~l~--D--~~~~~~~~ygv~~~~--~-g~~~P~~~lID~~G~V~~~~~~~~~~~~~ 224 (271)
+++.+++|.+++ +.....|+++. | ...+++++||+.... . ..+.|++||||++|+|+..+.+. ..+
T Consensus 77 ~~~~~~~~~~~~----~~~~~~w~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~lID~~G~i~~~~~g~---~~~ 149 (170)
T 3me7_A 77 TLEDIKRFQKEY----GIDGKGWKVVKAKTSEDLFKLLDAIDFRFMTAGNDFIHPNVVVVLSPELQIKDYIYGV---NYN 149 (170)
T ss_dssp CHHHHHHHHHHT----TCCSSSEEEEEESSHHHHHHHHHHTTCCCEEETTEEECCCEEEEECTTSBEEEEEESS---SCC
T ss_pred CHHHHHHHHHHc----CCCCCCeEEEeCCCHHHHHHHHHHCCeEEecCCCccccCceEEEECCCCeEEEEEeCC---CCC
Confidence 456667777776 33334565543 2 337889998876421 1 13678999999999999987543 345
Q ss_pred HHHHHHHHHHHHH
Q 024201 225 VDETLRTLQALQY 237 (271)
Q Consensus 225 ~~e~l~~l~~l~~ 237 (271)
.+++++.|+++..
T Consensus 150 ~~~i~~~l~~~~~ 162 (170)
T 3me7_A 150 YLEFVNALRLARG 162 (170)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhhc
Confidence 8999999887753
No 79
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=99.91 E-value=2.7e-24 Score=178.07 Aligned_cols=140 Identities=16% Similarity=0.095 Sum_probs=108.6
Q ss_pred CCCCCCCCCeEEeeecCCCceeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCC------
Q 024201 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTD------ 151 (271)
Q Consensus 78 ~~~G~~~Pdf~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d------ 151 (271)
+.+|+.+|+|++. +.+|+.++|++++|| ++||+|| ++|||+|+.++|.|++++++|+++|++||+|++|
T Consensus 23 ~~~g~~~p~f~l~---~~~G~~v~l~~~~Gk-~vlv~F~-atwC~~C~~~~~~l~~l~~~~~~~~v~vv~is~d~~~~~~ 97 (185)
T 2gs3_A 23 MRCARSMHEFSAK---DIDGHMVNLDKYRGF-VCIVTNV-ASQGGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQE 97 (185)
T ss_dssp GGGCCCGGGCEEE---BTTSCEEEGGGGTTS-EEEEEEE-CSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCC
T ss_pred ccCCCCcCCceeE---cCCCCEeeHHHcCCC-EEEEEEe-cCCCCchHHHHHHHHHHHHHhhcCCeEEEEEECcccCCCC
Confidence 6689999999998 677889999999998 9999999 9999999999999999999999999999999986
Q ss_pred --CHHHHHHHHHHhhhcCCCCCcccceEE--cCChH----HHHHh-------CCccCCCCccceEEEEEcCCCcEEEEEe
Q 024201 152 --SVFSHLAWVQTDRKSGGLGDLKYPLIA--DITKS----ISKSY-------GVLIPDQGIALRGLFIIDKEGVIQHSTI 216 (271)
Q Consensus 152 --~~~~~~~~~~~~~~~~~~~~~~f~~l~--D~~~~----~~~~y-------gv~~~~~g~~~P~~~lID~~G~V~~~~~ 216 (271)
+.+..++|.+++ +++|+++. |.+++ +.+.+ |+... .--++|++||||++|+|++++.
T Consensus 98 ~~~~~~~~~~~~~~-------~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~-~i~~~P~~~lid~~G~i~~~~~ 169 (185)
T 2gs3_A 98 PGSNEEIKEFAAGY-------NVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGN-AIKWNFTKFLIDKNGCVVKRYG 169 (185)
T ss_dssp CSCHHHHHHHHHHT-------TCCSEEBCCCBSSSTTBCHHHHHHTTSGGGCCSSSS-SCCSSCCEEEECTTSCEEEEEC
T ss_pred CCCHHHHHHHHHHc-------CCCCeeeeeeccCChhhhHHHHHHHhhcccccccCC-cccccceEEEECCCCCEEEeeC
Confidence 356678888877 78899987 44443 33333 32200 0014689999999999999976
Q ss_pred ccCCCCCCHHHHHHHHHH
Q 024201 217 NNLAIGRSVDETLRTLQA 234 (271)
Q Consensus 217 ~~~~~~~~~~e~l~~l~~ 234 (271)
+... .+++.+.|+.
T Consensus 170 g~~~----~~~l~~~i~~ 183 (185)
T 2gs3_A 170 PMEE----PLVIEKDLPH 183 (185)
T ss_dssp TTSC----GGGGGGGHHH
T ss_pred CCCC----HHHHHHHHHH
Confidence 5322 3444444443
No 80
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=99.91 E-value=3.9e-24 Score=177.83 Aligned_cols=137 Identities=15% Similarity=0.215 Sum_probs=112.8
Q ss_pred CCCCCCCCCeEEeeecCCCceeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCC------
Q 024201 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTD------ 151 (271)
Q Consensus 78 ~~~G~~~Pdf~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d------ 151 (271)
+..|+.+|+|++. +.+|+.++|++++|| ++||+|| ++|||+|+.+++.|++++++|+++|++||+|++|
T Consensus 22 ~~~~~~~p~f~l~---~~~G~~~~l~~~~Gk-~vll~F~-atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~ 96 (190)
T 2vup_A 22 MSAASSIFDFEVL---DADHKPYNLVQHKGS-PLLIYNV-ASKCGYTKGGYETATTLYNKYKSQGFTVLAFPCNQFGGQE 96 (190)
T ss_dssp --CCCSGGGSCCB---BTTSSBCCGGGGTTS-CEEEEEE-CSSSTTHHHHHHHHHHHHHHHGGGTCEEEEEECCCSTTCC
T ss_pred CCCCCcccCeEEE---cCCCCEEEHHHcCCC-EEEEEEe-cCCCCccHHHHHHHHHHHHHHhcCCeEEEEEEcCccCCCC
Confidence 6789999999998 677889999999998 9999999 8999999999999999999999999999999998
Q ss_pred --CHHHHHHHH-HHhhhcCCCCCcccceEE--cCChHHH---------HHhCCccCCCCccce------EEEEEcCCCcE
Q 024201 152 --SVFSHLAWV-QTDRKSGGLGDLKYPLIA--DITKSIS---------KSYGVLIPDQGIALR------GLFIIDKEGVI 211 (271)
Q Consensus 152 --~~~~~~~~~-~~~~~~~~~~~~~f~~l~--D~~~~~~---------~~ygv~~~~~g~~~P------~~~lID~~G~V 211 (271)
+.+..++|. +.+ +++|+++. |.++.++ +.|++. .+| ++||||++|+|
T Consensus 97 ~~~~~~~~~~~~~~~-------~~~~p~l~~~D~~~~~~~~~~~~l~~~~~~v~------~~P~i~~~~~~~lid~~G~i 163 (190)
T 2vup_A 97 PGNEEEIKEFVCTKF-------KAEFPIMAKINVNGENAHPLYEYMKKTKPGIL------KTKAIKWNFTSFLIDRDGVP 163 (190)
T ss_dssp CSCHHHHHHHHHHHH-------CCCSCBBCCCBSSSTTBCHHHHHHHHHSCCGG------GCCSCCSTTCEEEECTTSCE
T ss_pred CCCHHHHHHHHHHhc-------CCCeEEEeecccCcccccHHHHHHHhhcCCcC------CCccccccceEEEECCCCcE
Confidence 567788898 777 77899986 5554432 224665 566 99999999999
Q ss_pred EEEEeccCCCCCCHHHHHHHHHHHH
Q 024201 212 QHSTINNLAIGRSVDETLRTLQALQ 236 (271)
Q Consensus 212 ~~~~~~~~~~~~~~~e~l~~l~~l~ 236 (271)
++.+.+. ...+++.+.|+.+.
T Consensus 164 ~~~~~g~----~~~~~l~~~i~~ll 184 (190)
T 2vup_A 164 VERFSPG----ASVKDIEKKLIPLL 184 (190)
T ss_dssp EEEECTT----CCHHHHHHHHHHHH
T ss_pred EEEECCC----CCHHHHHHHHHHHH
Confidence 9997543 34577777777664
No 81
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=99.91 E-value=1.9e-23 Score=168.37 Aligned_cols=132 Identities=15% Similarity=0.226 Sum_probs=112.3
Q ss_pred CCCCeEEeeecCCCceeEecccccCCcEEEEEEecCCCCCC-hHHHHHHHHHHHHHHHh----cCcEEEEEeCCC----H
Q 024201 83 TAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFV-CPTEITAFSDRYTEFEK----LNTEILGVSTDS----V 153 (271)
Q Consensus 83 ~~Pdf~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~-C~~~l~~L~~~~~~~~~----~gv~vv~VS~d~----~ 153 (271)
.+|+|++. +.+|+.++|++++|| ++||+|| ++|||. |+.+++.|+++++++++ .++++|+|++|+ +
T Consensus 2 ~ap~f~l~---~~~G~~~~l~~~~gk-~vll~f~-~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~ 76 (164)
T 2ggt_A 2 LGGPFSLT---THTGERKTDKDYLGQ-WLLIYFG-FTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTK 76 (164)
T ss_dssp CCCCCEEE---ETTSCEEEGGGGTTC-EEEEEEE-CTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCH
T ss_pred CCCCeEEE---eCCCCEEeHHHcCCC-EEEEEEE-eCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCH
Confidence 47999998 678889999999998 9999999 899998 99999999999999987 489999999986 5
Q ss_pred HHHHHHHHHhhhcCCCCCcccceEE---cCChHHHHHhCCccCCCCccce---------------EEEEEcCCCcEEEEE
Q 024201 154 FSHLAWVQTDRKSGGLGDLKYPLIA---DITKSISKSYGVLIPDQGIALR---------------GLFIIDKEGVIQHST 215 (271)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~f~~l~---D~~~~~~~~ygv~~~~~g~~~P---------------~~~lID~~G~V~~~~ 215 (271)
+.+++|.+.+ +.+|+++. |...++++.||+. ..| ++||||++|+|++.+
T Consensus 77 ~~~~~~~~~~-------~~~~~~l~~~~d~~~~~~~~~~v~------~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~ 143 (164)
T 2ggt_A 77 EAIANYVKEF-------SPKLVGLTGTREEVDQVARAYRVY------YSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYF 143 (164)
T ss_dssp HHHHHHHHTT-------CSSCEEEECCHHHHHHHHHTTTCC------EEEEEECTTSCEEEEECCEEEEECTTSCEEEEE
T ss_pred HHHHHHHHHc-------CCCeEEEeCCHHHHHHHHHhcCeE------EEecCCCCCCCeeEeccceEEEECCCCeEEEEe
Confidence 6678888876 67899885 4456799999998 555 899999999999997
Q ss_pred eccCCCCCCHHHHHHHHHHHH
Q 024201 216 INNLAIGRSVDETLRTLQALQ 236 (271)
Q Consensus 216 ~~~~~~~~~~~e~l~~l~~l~ 236 (271)
.+. .+.+++.+.|+.+.
T Consensus 144 ~g~----~~~~~l~~~l~~ll 160 (164)
T 2ggt_A 144 GQN----KRKGEIAASIATHM 160 (164)
T ss_dssp ETT----CCHHHHHHHHHHHH
T ss_pred CCC----CCHHHHHHHHHHHH
Confidence 543 35688888888764
No 82
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=99.91 E-value=3.2e-23 Score=169.83 Aligned_cols=146 Identities=16% Similarity=0.234 Sum_probs=112.3
Q ss_pred CCCCCCCeEEeeecCCCceeEecccccCCcEEEEEEecCCCCC-ChHHHHHHHHHHHHHHHhcC--cEEEEEeCCC----
Q 024201 80 VGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTF-VCPTEITAFSDRYTEFEKLN--TEILGVSTDS---- 152 (271)
Q Consensus 80 ~G~~~Pdf~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp-~C~~~l~~L~~~~~~~~~~g--v~vv~VS~d~---- 152 (271)
+|.++|+|+|. +.+|++++|++|+|| ++||+|| ++||| .|+.+++.|.+++++++++| |++|+||+|+
T Consensus 8 ~~~~~PdF~L~---d~~G~~v~l~d~~Gk-~vll~F~-~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvDp~~Dt 82 (170)
T 4hde_A 8 LNWDLETFQFT---NQDGKPFGTKDLKGK-VWVADFM-FTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVDPDLDK 82 (170)
T ss_dssp CCBCCCCCEEE---CTTSCEEEHHHHTTS-CEEEEEE-CTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCC
T ss_pred CCCcCCCcEEE---CCCCCEEeHHHhCCC-EEEEEEE-CCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecCccccc
Confidence 68999999998 889999999999998 9999999 89998 79999999999999998654 8899999864
Q ss_pred HHHHHHHHHHhhhcCCCCCcccceEEcCChH-HH----HHhCCccCC--CC--ccceEEEEEcCCCcEEEEEeccCCCCC
Q 024201 153 VFSHLAWVQTDRKSGGLGDLKYPLIADITKS-IS----KSYGVLIPD--QG--IALRGLFIIDKEGVIQHSTINNLAIGR 223 (271)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~-~~----~~ygv~~~~--~g--~~~P~~~lID~~G~V~~~~~~~~~~~~ 223 (271)
++.+++|++.+ +.....|.++.+.+.+ +. ..|+..... .+ .|.+++||||++|+|+..+.+. ...
T Consensus 83 p~~l~~y~~~~----~~~~~~~~~ltg~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~liD~~G~i~~~~~g~--~~~ 156 (170)
T 4hde_A 83 PENLKAFIQKF----TEDTSNWNLLTGYSLEDITKFSKDNFQSLVDKPENGQVIHGTSFYLIDQNGKVMKKYSGI--SNT 156 (170)
T ss_dssp HHHHHHHHTTT----CSCCTTEEEEBCSCHHHHHHHHHHHHCCCCBCCTTSCCBCCCEEEEECTTSCEEEEEESS--SSC
T ss_pred HHHHHHHHHHc----CCCCCCceecCcccHHHHHHHHHhcccccccCCCCceEEeeeEEEEEcCCCeEEEEECCC--CCC
Confidence 55666676665 4445577788776532 22 335544322 11 3678999999999999886542 234
Q ss_pred CHHHHHHHHHHHH
Q 024201 224 SVDETLRTLQALQ 236 (271)
Q Consensus 224 ~~~e~l~~l~~l~ 236 (271)
..+++++.|+.|.
T Consensus 157 ~~~~l~~~ik~Ll 169 (170)
T 4hde_A 157 PYEDIIRDMKRLA 169 (170)
T ss_dssp CHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHh
Confidence 5788888888763
No 83
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.91 E-value=9e-24 Score=166.64 Aligned_cols=138 Identities=9% Similarity=0.159 Sum_probs=118.3
Q ss_pred CCCCCCCCCeEEeeecCCCceeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCC------
Q 024201 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTD------ 151 (271)
Q Consensus 78 ~~~G~~~Pdf~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d------ 151 (271)
+.+|+++|+|++... +.+|+.+++++++|| ++||+|| ++||+.|+.+++.|.+++++++++ +.+++|++|
T Consensus 1 l~~g~~~P~f~~~~~-~~~g~~~~~~~~~gk-~~lv~f~-~~~C~~C~~~~~~l~~l~~~~~~~-~~~~~v~~~~~~~~~ 76 (148)
T 2b5x_A 1 MKLRQPMPELTGEKA-WLNGEVTREQLIGEK-PTLIHFW-SISCHLCKEAMPQVNEFRDKYQDQ-LNVVAVHMPRSEDDL 76 (148)
T ss_dssp CCTTCBCCCCCCCSE-EESCCCCHHHHTTTS-CEEEEEE-CTTCHHHHHHHHHHHHHHHHHTTT-SEEEEEECCCSTTTS
T ss_pred CCCCCCCCCCccccc-cccCcccchhhcCCC-EEEEEEE-cCCCHHHHHHhHHHHHHHHHhcCC-cEEEEEEcCCCcccc
Confidence 468999999998311 456779999999998 8999999 899999999999999999999876 999999987
Q ss_pred CHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHH
Q 024201 152 SVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRT 231 (271)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~ 231 (271)
+.+..++|.+.+ +++|+++.|.+.++++.||+. .+|+++|||++|+|++...+. ...+++.+.
T Consensus 77 ~~~~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~v~------~~P~~~lid~~G~i~~~~~g~----~~~~~l~~~ 139 (148)
T 2b5x_A 77 DPGKIKETAAEH-------DITQPIFVDSDHALTDAFENE------YVPAYYVFDKTGQLRHFQAGG----SGMKMLEKR 139 (148)
T ss_dssp SHHHHHHHHHHT-------TCCSCEEECSSCHHHHHTCCC------CSSEEEEECTTCBEEEEEESC----STTHHHHHH
T ss_pred CHHHHHHHHHHc-------CCCcceEECCchhHHHHhCCC------CCCEEEEECCCCcEEEEecCC----CCHHHHHHH
Confidence 467778888887 789999999999999999998 899999999999999987653 245677777
Q ss_pred HHHHH
Q 024201 232 LQALQ 236 (271)
Q Consensus 232 l~~l~ 236 (271)
|+.+.
T Consensus 140 l~~~l 144 (148)
T 2b5x_A 140 VNRVL 144 (148)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77653
No 84
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=99.90 E-value=1.9e-23 Score=176.70 Aligned_cols=148 Identities=12% Similarity=0.059 Sum_probs=106.2
Q ss_pred CCCCCCCCCeEEeeecCCC-ceeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCC-----
Q 024201 78 PLVGNTAPDFAAEAVFDQE-FINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTD----- 151 (271)
Q Consensus 78 ~~~G~~~Pdf~l~~~~~~~-g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d----- 151 (271)
-..++.+|+|++. +.+ |+.++|++++|| ++||+|| ++|||+|+.++|.|++++++|+++|++||+|++|
T Consensus 20 ~~~~~~~p~f~l~---~~~~G~~v~l~~~~Gk-~vlv~Fw-atwC~~C~~e~p~l~~l~~~~~~~g~~vv~v~~d~~~~~ 94 (208)
T 2f8a_A 20 FQSMQSVYAFSAR---PLAGGEPVSLGSLRGK-VLLIENV-ASLGGTTVRDYTQMNELQRRLGPRGLVVLGFPCNQFGHQ 94 (208)
T ss_dssp --CCCCGGGCEEC---BTTCSSCEEGGGGTTS-EEEEEEE-CSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTT
T ss_pred hhhcCccCceEee---eCCCCCCccHHHcCCC-EEEEEEE-CCCCccHHHHHHHHHHHHHHccCCCeEEEEEECCccccc
Confidence 3468899999998 566 889999999998 9999999 9999999999999999999999999999999986
Q ss_pred ---CHHHHHHHHHHhhhcCCCCCcccceEEcCC--hH----HHH----HhCCc---------------cC---CCCc-cc
Q 024201 152 ---SVFSHLAWVQTDRKSGGLGDLKYPLIADIT--KS----ISK----SYGVL---------------IP---DQGI-AL 199 (271)
Q Consensus 152 ---~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~--~~----~~~----~ygv~---------------~~---~~g~-~~ 199 (271)
+.+.+++|++..... ...+++||++.|.+ ++ +.+ .++.. .. ..++ ++
T Consensus 95 e~d~~~~i~~f~~~~~~~-~~~~~~fp~l~d~d~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 173 (208)
T 2f8a_A 95 ENAKNEEILNSLKYVRPG-GGFEPNFMLFEKCEVNGAGAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRNDVAWN 173 (208)
T ss_dssp TCSCHHHHHHHHHHTSSC-TTCCCSSEEBCCCCCSSTTCCHHHHHHHHHSCSCTTCSSCCCSSGGGCCSSSCCTTCCCST
T ss_pred CCCCHHHHHHHHHhcccc-cccccceEEEEEeecCCCCccHHHHHHHhcCCCccccchhhccccccccccccccCccccC
Confidence 346678888721000 00277899986533 22 222 22210 00 0011 46
Q ss_pred eEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHH
Q 024201 200 RGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 200 P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l 235 (271)
|++||||++|+|++++.+... .+++.+.|+.+
T Consensus 174 p~tflID~~G~i~~~~~g~~~----~~~l~~~I~~l 205 (208)
T 2f8a_A 174 FEKFLVGPDGVPLRRYSRRFQ----TIDIEPDIEAL 205 (208)
T ss_dssp TCEEEECTTSCEEEEECTTSC----GGGGHHHHHHH
T ss_pred ceEEEEcCCCcEEEEeCCCCC----HHHHHHHHHHH
Confidence 999999999999999865433 34555555554
No 85
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=99.90 E-value=1e-22 Score=165.24 Aligned_cols=138 Identities=17% Similarity=0.227 Sum_probs=113.0
Q ss_pred CCeEEeeecCCCceeEecccccCCcEEEEEEecCCCCCC-hHHHHHHHHHHHHHHHh----cCcEEEEEeCC----CHHH
Q 024201 85 PDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFV-CPTEITAFSDRYTEFEK----LNTEILGVSTD----SVFS 155 (271)
Q Consensus 85 Pdf~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~-C~~~l~~L~~~~~~~~~----~gv~vv~VS~d----~~~~ 155 (271)
|+|++. +.+|+.+++++++|| ++||+|| ++||+. |+.+++.|++++++|++ .+++||+|++| +++.
T Consensus 7 p~f~l~---~~~G~~~~l~~~~gk-~vll~F~-~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~ 81 (171)
T 2rli_A 7 GDFHLL---DHRGRARCKADFRGQ-WVLMYFG-FTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEA 81 (171)
T ss_dssp SCCEEE---ETTSCEEETTTTTTS-EEEEEEE-CTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHH
T ss_pred CCeEEE---eCCCCEEeHHHhCCC-EEEEEEE-cCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHH
Confidence 999998 677889999999998 9999999 999997 99999999999999975 58999999997 4667
Q ss_pred HHHHHHHhhhcCCCCCcccceEEcCC---hHHHHHhCCccCCC-----C----ccceEEEEEcCCCcEEEEEeccCCCCC
Q 024201 156 HLAWVQTDRKSGGLGDLKYPLIADIT---KSISKSYGVLIPDQ-----G----IALRGLFIIDKEGVIQHSTINNLAIGR 223 (271)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~f~~l~D~~---~~~~~~ygv~~~~~-----g----~~~P~~~lID~~G~V~~~~~~~~~~~~ 223 (271)
+++|.+.+ +.+|+++.|.. ..+++.||+..... + .+.|++||||++|+|++.+.+. .
T Consensus 82 ~~~~~~~~-------~~~~~~l~~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~----~ 150 (171)
T 2rli_A 82 MARYVQDF-------HPRLLGLTGSTKQVAQASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGRS----R 150 (171)
T ss_dssp HHHHHHTT-------CTTCCEEECCHHHHHHHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEEEESS----C
T ss_pred HHHHHHHc-------CCCeEEEeCCHHHHHHHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEEECCC----C
Confidence 78888877 67899998753 57899999972110 0 1345999999999999997543 3
Q ss_pred CHHHHHHHHHHHHHh
Q 024201 224 SVDETLRTLQALQYV 238 (271)
Q Consensus 224 ~~~e~l~~l~~l~~~ 238 (271)
+.+++++.|+.+...
T Consensus 151 ~~~~l~~~l~~ll~~ 165 (171)
T 2rli_A 151 SAEQISDSVRRHMAA 165 (171)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHH
Confidence 578888888877543
No 86
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=99.90 E-value=3.7e-23 Score=175.95 Aligned_cols=141 Identities=13% Similarity=0.115 Sum_probs=107.6
Q ss_pred CCCCCCCCeEEeeecCCC-ceeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCC------
Q 024201 79 LVGNTAPDFAAEAVFDQE-FINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTD------ 151 (271)
Q Consensus 79 ~~G~~~Pdf~l~~~~~~~-g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d------ 151 (271)
..+..+|+|++. +.+ |+.++|++|+|| ++||+|| ++|||+|+ ++|.|++++++|+++|++||+|++|
T Consensus 30 ~~~~~~pdF~l~---d~~~G~~v~Lsd~~GK-vvll~Fw-At~C~~c~-e~p~L~~l~~~~~~~g~~Vlgvs~d~f~~~e 103 (215)
T 2i3y_A 30 DEKGTIYDYEAI---ALNKNEYVSFKQYVGK-HILFVNV-ATYCGLTA-QYPELNALQEELKPYGLVVLGFPCNQFGKQE 103 (215)
T ss_dssp CCCCCGGGCEEE---BSSSSCEEEGGGGTTS-EEEEEEE-CSSSGGGG-GHHHHHHHHHHHGGGTEEEEEEECCCSTTCC
T ss_pred cccCCcCCcEee---eCCCCCEEcHHHhCCC-EEEEEEe-CCCCCChH-hHHHHHHHHHHhccCCeEEEEEEccccCcCC
Confidence 457789999998 667 889999999999 8999999 99999999 9999999999999999999999975
Q ss_pred --CHHHHHHHHH------HhhhcCCCCCcccceEEcCC--hH----HHHHh----C----Ccc--------C--CCCc-c
Q 024201 152 --SVFSHLAWVQ------TDRKSGGLGDLKYPLIADIT--KS----ISKSY----G----VLI--------P--DQGI-A 198 (271)
Q Consensus 152 --~~~~~~~~~~------~~~~~~~~~~~~f~~l~D~~--~~----~~~~y----g----v~~--------~--~~g~-~ 198 (271)
+.+.+++|++ ++ +++||++.|.+ +. +.+.+ . +.. + ..++ +
T Consensus 104 ~~~~~~i~~f~~~~~~~~~~-------~~~fpll~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~ 176 (215)
T 2i3y_A 104 PGDNKEILPGLKYVRPGGGF-------VPSFQLFEKGDVNGEKEQKVFSFLKHSCPHPSEILGTFKSISWDPVKVHDIRW 176 (215)
T ss_dssp CSCHHHHHHHHHHTSSCTTC-------CCSSEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCTTTCCSSSCCTTCCCS
T ss_pred CCCHHHHHHHHHhccchhcc-------CccceeEeeeccCCcccchHHHHHHhhCccccccccccccccccccccccccc
Confidence 3466788887 55 78999997643 22 22211 0 100 0 0011 3
Q ss_pred ceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHHH
Q 024201 199 LRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQ 236 (271)
Q Consensus 199 ~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l~ 236 (271)
.|++||||++|+|+.++.+. ...+++.+.|+.+.
T Consensus 177 npttfLID~~G~vv~~~~g~----~~~~~l~~~I~~ll 210 (215)
T 2i3y_A 177 NFEKFLVGPDGIPVMRWSHR----ATVSSVKTDILAYL 210 (215)
T ss_dssp TTCEEEECTTSCEEEEECTT----SCHHHHHHHHHHHG
T ss_pred CceEEEECCCCeEEEEeCCC----CCHHHHHHHHHHHH
Confidence 48999999999999997543 23577777777764
No 87
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=99.90 E-value=2.1e-24 Score=179.13 Aligned_cols=137 Identities=15% Similarity=0.196 Sum_probs=107.1
Q ss_pred CCCCCCCCCeEEeeecCCCceeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCC-----
Q 024201 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDS----- 152 (271)
Q Consensus 78 ~~~G~~~Pdf~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~----- 152 (271)
+..+.++|+|++. +.+|+.++|++++|| ++||+|| ++|||+|+.++|.|++++++|+++|++||+|++|.
T Consensus 20 ~~~~~~~p~f~l~---d~~G~~~~l~~~~Gk-~vlv~F~-atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~e 94 (187)
T 3dwv_A 20 MSAASSIFDFEVL---DADHKPYNLVQHKGS-PLLIYNV-ASKCGYTKGGYETATTLYNKYKSQGFTVLAFPSNQFGGQE 94 (187)
T ss_dssp CTTCCSGGGSCCB---BTTSCBCCGGGGTTS-CEEEEEE-CCBCSCCTTHHHHHHHHHHHHGGGTCEEEEEEBCCCSSCS
T ss_pred hcCCCccCCeEEE---cCCCCEeeHHHhCCC-EEEEEEe-cCCCCCcHHHHHHHHHHHHHhhhCCeEEEEEECcccCCCC
Confidence 5678999999998 778889999999998 8999999 99999999999999999999999999999999873
Q ss_pred ---HHHHHHHHHHhhhcCCCCCcccceEE--cCChHHH------------HHhCCccCCCCccce---EEEEEcCCCcEE
Q 024201 153 ---VFSHLAWVQTDRKSGGLGDLKYPLIA--DITKSIS------------KSYGVLIPDQGIALR---GLFIIDKEGVIQ 212 (271)
Q Consensus 153 ---~~~~~~~~~~~~~~~~~~~~~f~~l~--D~~~~~~------------~~ygv~~~~~g~~~P---~~~lID~~G~V~ 212 (271)
.+..++|.+.. .+++|+++. |.++..+ ..||+. .+| ++||||++|+|+
T Consensus 95 ~~~~~~~~~~~~~~------~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~------~iP~~~~~~liD~~G~i~ 162 (187)
T 3dwv_A 95 PGNEEEIKEFVCTK------FKAEFPIMAKINVNGENAHPLYEYMKKTKPGILATK------AIKWNFTSFLIDRDGVPV 162 (187)
T ss_dssp SSBTTHHHHSCCBC------CCCSSCBBCCBCCSCC-CCHHHHHHHHHSCCSBSSS------SCCSTTCEEEECTTSCEE
T ss_pred CCCHHHHHHHHHhc------cCCCCceeeccccCCcchhHHHHHHHhhcCCccCCC------ccccceeEEEECCCCCEE
Confidence 34445554421 267899986 4444322 122333 567 999999999999
Q ss_pred EEEeccCCCCCCHHHHHHHHHHH
Q 024201 213 HSTINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 213 ~~~~~~~~~~~~~~e~l~~l~~l 235 (271)
+.+.+. ...+++.+.|+.+
T Consensus 163 ~~~~g~----~~~~~l~~~i~~l 181 (187)
T 3dwv_A 163 ERFSPG----ASVKDIEEKLIPL 181 (187)
T ss_dssp EEECTT----CCHHHHHHHHHHH
T ss_pred EEECCC----CCHHHHHHHHHHH
Confidence 997543 3456777777665
No 88
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.90 E-value=2.2e-23 Score=165.81 Aligned_cols=138 Identities=20% Similarity=0.306 Sum_probs=117.4
Q ss_pred CCCCCCCCC-CeEEeeecCCCceeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCH-H
Q 024201 77 PPLVGNTAP-DFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSV-F 154 (271)
Q Consensus 77 ~~~~G~~~P-df~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~-~ 154 (271)
.+.+|+++| +|++. +.+|+.+++++++|| ++||+|| ++||+.|+.+++.|.+++++++++++.+++|+.|.. +
T Consensus 2 ~l~~G~~~p~~f~l~---~~~g~~~~l~~~~gk-~~lv~f~-~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~ 76 (152)
T 2lja_A 2 SLRSGNPSAASFSYP---DINGKTVSLADLKGK-YIYIDVW-ATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDKNKK 76 (152)
T ss_dssp CTTTTCCCSSSCEEE---ETTTEEEESTTTTTS-EEEEEEC-CSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCSCHH
T ss_pred ccccCCCCCcccEee---cCCCCEeeHHHcCCC-EEEEEEE-CCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccCcHH
Confidence 377999999 99998 677889999999998 8999999 899999999999999999999988999999999864 4
Q ss_pred HHHHHHHHhhhcCCCCCcc-cceEEcCChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHH
Q 024201 155 SHLAWVQTDRKSGGLGDLK-YPLIADITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQ 233 (271)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~-f~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~ 233 (271)
..++|.+.+ ++. ++++.|.+.++.+.||+. .+|++||||++|+|++...+. .+.+++.+.|+
T Consensus 77 ~~~~~~~~~-------~~~~~~~~~d~~~~~~~~~~v~------~~P~~~lid~~G~i~~~~~g~----~~~~~l~~~l~ 139 (152)
T 2lja_A 77 AWENMVTKD-------QLKGIQLHMGTDRTFMDAYLIN------GIPRFILLDRDGKIISANMTR----PSDPKTAEKFN 139 (152)
T ss_dssp HHHHHHHHH-------TCCSEEEECSSCTHHHHHTTCC------SSCCEEEECTTSCEEESSCCC----TTCHHHHHHHH
T ss_pred HHHHHHHhc-------CCCCceeecCcchhHHHHcCcC------CCCEEEEECCCCeEEEccCCC----CCHHHHHHHHH
Confidence 567777776 444 467778889999999998 899999999999999985332 34577777777
Q ss_pred HHH
Q 024201 234 ALQ 236 (271)
Q Consensus 234 ~l~ 236 (271)
.+.
T Consensus 140 ~~~ 142 (152)
T 2lja_A 140 ELL 142 (152)
T ss_dssp HHH
T ss_pred HHh
Confidence 664
No 89
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.90 E-value=1.5e-23 Score=169.56 Aligned_cols=132 Identities=13% Similarity=0.187 Sum_probs=116.3
Q ss_pred CCCCCCCCCeEEeeecCCCceeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCC------
Q 024201 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTD------ 151 (271)
Q Consensus 78 ~~~G~~~Pdf~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d------ 151 (271)
+.+|+++|+|++. +.+|+.+++++++|| ++||+|| ++||++|+.+++.|.+++++++ ++.||+|++|
T Consensus 11 ~~~g~~~p~~~l~---~~~g~~~~l~~~~gk-~~lv~F~-~~~C~~C~~~~~~l~~l~~~~~--~v~vv~i~~d~~~~~~ 83 (165)
T 3ha9_A 11 EEVLEREASFSLT---TIDGEVISLNNVGGD-VVILWFM-AAWCPSCVYMADLLDRLTEKYR--EISVIAIDFWTAEALK 83 (165)
T ss_dssp HHHHHHHHCCCEE---BTTSCEECGGGCCSS-EEEEEEE-CTTCTTHHHHHHHHHHHHHHCT--TEEEEEEECCSHHHHH
T ss_pred ccccCcCCCCEee---cCCCCEeeHHHhCCC-EEEEEEE-CCCCcchhhhHHHHHHHHHHcC--CcEEEEEEeccccccc
Confidence 4589999999998 677889999999998 9999999 9999999999999999999998 8999999997
Q ss_pred -------------CHHHHHHHHHHhhhcCCCCCc-ccceEEcCChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEec
Q 024201 152 -------------SVFSHLAWVQTDRKSGGLGDL-KYPLIADITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTIN 217 (271)
Q Consensus 152 -------------~~~~~~~~~~~~~~~~~~~~~-~f~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~ 217 (271)
+.+..++|.+.+ ++ +|+++.| +.++.+.|++. .+|++||||++|+|++ .+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~d-~~~~~~~~~v~------~~P~~~lid~~G~i~~--~g 147 (165)
T 3ha9_A 84 ALGLNKPGYPPPDTPEMFRKFIANY-------GDPSWIMVMD-DGSLVEKFNVR------SIDYIVIMDKSSNVLY--AG 147 (165)
T ss_dssp HHTCCSTTSCCCCCHHHHHHHHHHH-------SCTTSEEEEC-CSHHHHHTTCC------SSSEEEEEETTCCEEE--EE
T ss_pred ccccccccCCCCCCHHHHHHHHHHc-------CCCCeeEEeC-hHHHHHHhCCC------CceEEEEEcCCCcEEE--eC
Confidence 667778888888 67 9999999 99999999999 8999999999999999 23
Q ss_pred cCCCCCCHHHHHHHHHHH
Q 024201 218 NLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 218 ~~~~~~~~~e~l~~l~~l 235 (271)
.. .+.+++.+.|+.+
T Consensus 148 ~~---~~~~~l~~~l~~l 162 (165)
T 3ha9_A 148 TT---PSLGELESVIKSV 162 (165)
T ss_dssp ES---CCHHHHHHHHHHC
T ss_pred CC---CCHHHHHHHHHHH
Confidence 21 1567777777765
No 90
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.90 E-value=1.4e-23 Score=167.48 Aligned_cols=133 Identities=20% Similarity=0.261 Sum_probs=117.8
Q ss_pred CCCCCCCCCeEEeeecCCCceeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeC---CCHH
Q 024201 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVST---DSVF 154 (271)
Q Consensus 78 ~~~G~~~Pdf~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~---d~~~ 154 (271)
+.+|+++|+|++. +.+|+.+++++++ | ++||+|| ++||++|+.+++.|.++++++ ++.+|+|++ ++.+
T Consensus 5 l~~g~~~p~f~l~---~~~g~~~~l~~~~-k-~vll~f~-~~~C~~C~~~~~~l~~l~~~~---~v~~v~v~~d~~~~~~ 75 (154)
T 3ia1_A 5 VKPGEPLPDFLLL---DPKGQPVTPATVS-K-PAVIVFW-ASWCTVCKAEFPGLHRVAEET---GVPFYVISREPRDTRE 75 (154)
T ss_dssp CCSBEECCCCCEE---CTTSCEECTTTSC-S-SEEEEEE-CTTCHHHHHHHHHHHHHHHHH---CCCEEEEECCTTCCHH
T ss_pred CCCCCcCCceEEE---CCCCCEechHHcC-C-eEEEEEE-cccChhHHHHHHHHHHHHHHc---CCeEEEEeCCCcccHH
Confidence 7899999999998 6788899999998 6 8999999 999999999999999999999 899999999 6677
Q ss_pred HHHHHHHHhhhcCCCCCcccceEEc---CChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHH
Q 024201 155 SHLAWVQTDRKSGGLGDLKYPLIAD---ITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRT 231 (271)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~f~~l~D---~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~ 231 (271)
..++|.+.+ +++|+++.| .+.++++.||+. .+|++||||++|+|++...+. ...+++.+.
T Consensus 76 ~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~v~------~~P~~~lid~~G~i~~~~~g~----~~~~~l~~~ 138 (154)
T 3ia1_A 76 VVLEYMKTY-------PRFIPLLASDRDRPHEVAARFKVL------GQPWTFVVDREGKVVALFAGR----AGREALLDA 138 (154)
T ss_dssp HHHHHHTTC-------TTEEECBCCSSCCHHHHHTTSSBC------SSCEEEEECTTSEEEEEEESB----CCHHHHHHH
T ss_pred HHHHHHHHc-------CCCcccccccccchHHHHHHhCCC------cccEEEEECCCCCEEEEEcCC----CCHHHHHHH
Confidence 777888776 789999998 679999999998 899999999999999997643 357788888
Q ss_pred HHHHH
Q 024201 232 LQALQ 236 (271)
Q Consensus 232 l~~l~ 236 (271)
|+.+.
T Consensus 139 l~~~~ 143 (154)
T 3ia1_A 139 LLLAG 143 (154)
T ss_dssp HHHTT
T ss_pred HHhcc
Confidence 87664
No 91
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=99.90 E-value=1.3e-23 Score=170.64 Aligned_cols=142 Identities=22% Similarity=0.301 Sum_probs=118.6
Q ss_pred CCCCCCCCCeEEeeecCCCceeEecccccCCcEEEEEEecCCCCCC-hHHHHHHHHHHHHHHHhc---CcEEEEEeCC--
Q 024201 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFV-CPTEITAFSDRYTEFEKL---NTEILGVSTD-- 151 (271)
Q Consensus 78 ~~~G~~~Pdf~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~-C~~~l~~L~~~~~~~~~~---gv~vv~VS~d-- 151 (271)
..+|+++|+|++. +.+| .+++++++|| ++||+|| ++||+. |+.+++.|.+++++|+++ +++||+|++|
T Consensus 10 ~~~G~~~p~f~l~---~~~g-~~~l~~~~gk-~vll~f~-~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~ 83 (172)
T 2k6v_A 10 RLLNPKPVDFALE---GPQG-PVRLSQFQDK-VVLLFFG-FTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPE 83 (172)
T ss_dssp EEEEEEECCCEEE---CSSS-EEEGGGSTTS-EEEEEEE-CTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTT
T ss_pred cccCCCCCCeEEE---cCCC-CCcHHHhCCC-EEEEEEE-CCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCC
Confidence 3469999999998 7788 9999999998 9999999 899997 999999999999999875 7999999986
Q ss_pred --CHHHHHHHHHHhhhcCCCCCcccceEEcCC---hHHHHHhCCccCCC--------C-ccceEEEEEcCCCcEEEEEec
Q 024201 152 --SVFSHLAWVQTDRKSGGLGDLKYPLIADIT---KSISKSYGVLIPDQ--------G-IALRGLFIIDKEGVIQHSTIN 217 (271)
Q Consensus 152 --~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~---~~~~~~ygv~~~~~--------g-~~~P~~~lID~~G~V~~~~~~ 217 (271)
+++.+++|.+++ +.+|+++.|.+ .++++.||+..... + .++|++|||| +|+|++.+.+
T Consensus 84 ~d~~~~~~~~~~~~-------~~~~~~l~d~~~~~~~~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid-~G~i~~~~~g 155 (172)
T 2k6v_A 84 RDPPEVADRYAKAF-------HPSFLGLSGSPEAVREAAQTFGVFYQKSQYRGPGEYLVDHTATTFVVK-EGRLVLLYSP 155 (172)
T ss_dssp TCCHHHHHHHHHHH-------CTTEEEECCCHHHHHHHHHHHTCCEEEEEEEETTEEEEEECCCEEEEE-TTEEEEEECH
T ss_pred CCCHHHHHHHHHHh-------CCCcEEEeCCHHHHHHHHHhcCeEEEeccCCCCCCceEecCCEEEEEE-CCEEEEEECC
Confidence 457788899888 78999999987 68999999853311 1 2679999999 9999999765
Q ss_pred cCCCCCCHHHHHHHHHHH
Q 024201 218 NLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 218 ~~~~~~~~~e~l~~l~~l 235 (271)
.. ..+.+++++.|+.+
T Consensus 156 ~~--~~~~~~l~~~l~~l 171 (172)
T 2k6v_A 156 DK--AEATDRVVADLQAL 171 (172)
T ss_dssp HH--HTCHHHHHHHHHHC
T ss_pred CC--CCCHHHHHHHHHHh
Confidence 43 22677888887754
No 92
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=99.90 E-value=1e-22 Score=172.25 Aligned_cols=140 Identities=14% Similarity=0.144 Sum_probs=104.7
Q ss_pred CCCCCCCeEEeeecCCC-ceeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCC-------
Q 024201 80 VGNTAPDFAAEAVFDQE-FINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTD------- 151 (271)
Q Consensus 80 ~G~~~Pdf~l~~~~~~~-g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d------- 151 (271)
....+|+|++. +.+ |+.++|++|+|| ++||+|| ++|||.| .++|.|++++++|+++|++||+|++|
T Consensus 13 ~~~~~pdF~l~---d~~~G~~v~Ls~~kGK-vvll~F~-At~C~~c-~e~p~L~~l~~~~~~~g~~vlgvs~d~f~~~e~ 86 (207)
T 2r37_A 13 ISGTIYEYGAL---TIDGEEYIPFKQYAGK-YVLFVNV-ASYGGLT-GQYIELNALQEELAPFGLVILGFPCNQFGKQEP 86 (207)
T ss_dssp --CCGGGCEEE---BTTSSCEEEGGGGTTS-EEEEEEE-CSSSTTT-THHHHHHHHHHHHGGGTEEEEEEECCCBTTCCC
T ss_pred ccCccCCeEee---eCCCCCEEcHHHhCCC-EEEEEEe-CCCCCCh-HHHHHHHHHHHHhccCCEEEEEEECcccCcCCC
Confidence 35679999998 667 889999999998 8999999 9999999 79999999999999999999999965
Q ss_pred -CHHHHHHHHH------HhhhcCCCCCcccceEEcCC--hH----HHHHh----C----Ccc--------C--CCCc-cc
Q 024201 152 -SVFSHLAWVQ------TDRKSGGLGDLKYPLIADIT--KS----ISKSY----G----VLI--------P--DQGI-AL 199 (271)
Q Consensus 152 -~~~~~~~~~~------~~~~~~~~~~~~f~~l~D~~--~~----~~~~y----g----v~~--------~--~~g~-~~ 199 (271)
+.+.+++|++ ++ +++||++.|.+ +. +...+ + +.. + ..++ +.
T Consensus 87 ~~~~~i~~f~~~~~~~~~~-------~~~fp~l~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~~ 159 (207)
T 2r37_A 87 GENSEILPTLKYVRPGGGF-------VPNFQLFEKGDVNGEKEQKFYTFLKNSCPPTSELLGTSDRLFWEPMKVHDIRWN 159 (207)
T ss_dssp SCHHHHHHHHHHTSSCTTC-------CCSSEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCGGGBCCSSCCTTCCCST
T ss_pred CCHHHHHHHHHhcchhhcc-------CccceeeeEeccCCcccchHHHHHHhhCccccccccccccccccccccCccccc
Confidence 3466788887 55 78999997643 22 22211 1 110 0 0011 45
Q ss_pred eEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHHH
Q 024201 200 RGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQ 236 (271)
Q Consensus 200 P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l~ 236 (271)
|++||||++|+|++++.+. ...+++.+.|+.+.
T Consensus 160 ~ttflID~~G~i~~~~~g~----~~~~~l~~~I~~ll 192 (207)
T 2r37_A 160 FEKFLVGPDGIPIMRWHHR----TTVSNVKMDILSYM 192 (207)
T ss_dssp TCEEEECTTSCEEEEECTT----SCHHHHHHHHHHHH
T ss_pred ceEEEECCCCcEEEEECCC----CCHHHHHHHHHHHH
Confidence 8999999999999997543 23466666666654
No 93
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.89 E-value=1.3e-22 Score=157.18 Aligned_cols=130 Identities=25% Similarity=0.356 Sum_probs=110.1
Q ss_pred CCCCeEEeeecCCCceeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEE------eCCCHHHH
Q 024201 83 TAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGV------STDSVFSH 156 (271)
Q Consensus 83 ~~Pdf~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~V------S~d~~~~~ 156 (271)
++|+|++. +.+|+.+++++++|| ++||+|| ++||+.|+.+++.|.++++++ ..++.+|+| ..++....
T Consensus 1 ~~p~f~l~---~~~g~~~~l~~~~gk-~~lv~f~-~~~C~~C~~~~~~l~~~~~~~-~~~~~~v~i~~~~~~~~~~~~~~ 74 (138)
T 4evm_A 1 EVADFELM---GVDGKTYRLSDYKGK-KVYLKFW-ASWCSICLASLPDTDEIAKEA-GDDYVVLTVVSPGHKGEQSEADF 74 (138)
T ss_dssp CCCCCEEE---BTTSCEEEGGGGTTS-EEEEEEC-CTTCHHHHHHHHHHHHHHHTC-TTTEEEEEEECTTSTTCCCHHHH
T ss_pred CCCcceeE---CCCCCEEEHHHhCCC-EEEEEEE-cCcCHHHHHHHHHHHHHHHHh-CCCcEEEEEEcCCCCchhhHHHH
Confidence 48999998 678889999999998 8999999 999999999999999999985 457999999 33455666
Q ss_pred HHHHHHhhhcCCCCCc-ccceEEcCChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHH
Q 024201 157 LAWVQTDRKSGGLGDL-KYPLIADITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 157 ~~~~~~~~~~~~~~~~-~f~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l 235 (271)
.+|.+.+ ++ +|+++.|.+.++++.||+. .+|++||||++|+|++.+.+. ...+++.+.|+.+
T Consensus 75 ~~~~~~~-------~~~~~~~~~d~~~~~~~~~~v~------~~P~~~lid~~G~i~~~~~g~----~~~~~l~~~l~~l 137 (138)
T 4evm_A 75 KNWYKGL-------DYKNLPVLVDPSGKLLETYGVR------SYPTQAFIDKEGKLVKTHPGF----MEKDAILQTLKEL 137 (138)
T ss_dssp HHHHTTC-------CCTTCCEEECTTCHHHHHTTCC------SSSEEEEECTTCCEEEEEESC----CCHHHHHHHHHHC
T ss_pred HHHHhhc-------CCCCeeEEECcchHHHHHcCcc------cCCeEEEECCCCcEEEeecCC----CcHHHHHHHHHhh
Confidence 7777665 55 8999999999999999998 899999999999999987643 3467777777654
No 94
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.89 E-value=2.6e-22 Score=155.76 Aligned_cols=131 Identities=19% Similarity=0.277 Sum_probs=114.0
Q ss_pred CCCCCCCeEEeeecCCCceeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCC-HHHHHH
Q 024201 80 VGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDS-VFSHLA 158 (271)
Q Consensus 80 ~G~~~Pdf~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~-~~~~~~ 158 (271)
+|.++|+|++. +.+|+.+++++++|| ++||+|| ++||+.|+.+++.|.+++++++ ++.+++|+.|+ .+..++
T Consensus 1 ~~~~~p~~~~~---~~~g~~~~l~~~~~k-~~ll~f~-~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~ 73 (136)
T 1zzo_A 1 TVPAQLQFSAK---TLDGHDFHGESLLGK-PAVLWFW-APWCPTCQGEAPVVGQVAASHP--EVTFVGVAGLDQVPAMQE 73 (136)
T ss_dssp CCCGGGCCEEE---BTTSCEEEGGGGTTS-CEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSSCHHHHHH
T ss_pred CCCCCCCcccc---cCCCCEeeHHHhCCC-eEEEEEE-cCCChhHHHHHHHHHHHHHHcC--CeEEEEEeCCCCHHHHHH
Confidence 37789999998 667889999999998 8999999 9999999999999999999987 89999999875 667788
Q ss_pred HHHHhhhcCCCCCc-ccceEEcCChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHH
Q 024201 159 WVQTDRKSGGLGDL-KYPLIADITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 159 ~~~~~~~~~~~~~~-~f~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l 235 (271)
|.+.+ ++ +|+++.|.+.++++.||+. .+|+++|||++|+|+ .+.+. ...+++.+.|+.+
T Consensus 74 ~~~~~-------~~~~~~~~~d~~~~~~~~~~i~------~~P~~~~id~~g~i~-~~~g~----~~~~~l~~~l~~~ 133 (136)
T 1zzo_A 74 FVNKY-------PVKTFTQLADTDGSVWANFGVT------QQPAYAFVDPHGNVD-VVRGR----MSQDELTRRVTAL 133 (136)
T ss_dssp HHHHT-------TCTTSEEEECTTCHHHHHTTCC------SSSEEEEECTTCCEE-EEESC----CCHHHHHHHHHHH
T ss_pred HHHHc-------CCCceEEEEcCCcHHHHHcCCC------CCceEEEECCCCCEE-EEecC----CCHHHHHHHHHHH
Confidence 88877 66 8999999999999999998 899999999999999 65443 3467777777655
No 95
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.89 E-value=2.4e-22 Score=156.38 Aligned_cols=131 Identities=19% Similarity=0.225 Sum_probs=114.0
Q ss_pred CCCCeEEeeecCCCceeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCC-HHHHHHHHH
Q 024201 83 TAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDS-VFSHLAWVQ 161 (271)
Q Consensus 83 ~~Pdf~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~-~~~~~~~~~ 161 (271)
.+|+|++. +.+|+.+++++++|| ++||+|| ++||++|..+++.|.+++++++ ++.+++|+.|+ .+..++|.+
T Consensus 3 ~~p~~~l~---~~~g~~~~l~~~~~k-~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~ 75 (136)
T 1lu4_A 3 ERLQFTAT---TLSGAPFDGASLQGK-PAVLWFW-TPWCPFCNAEAPSLSQVAAANP--AVTFVGIATRADVGAMQSFVS 75 (136)
T ss_dssp GGGCCEEE---BTTSCEEEGGGGTTS-CEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSSCHHHHHHHHH
T ss_pred CCCCeEee---cCCCCeecHHHhCCC-EEEEEEE-CCcChhHHHHHHHHHHHHHHCC--CcEEEEEEcCCCHHHHHHHHH
Confidence 58999998 677889999999998 8999999 9999999999999999999997 89999999987 777888988
Q ss_pred HhhhcCCCCCcccceEEcCChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHH
Q 024201 162 TDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 162 ~~~~~~~~~~~~f~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l 235 (271)
.+ +++|+++.|.+.++++.|++. .+|+++|||++|+|+ .+... ....+.+++.+.|+.+
T Consensus 76 ~~-------~~~~~~~~d~~~~~~~~~~i~------~~P~~~lid~~G~i~-~~~~~-~g~~~~~~l~~~l~~l 134 (136)
T 1lu4_A 76 KY-------NLNFTNLNDADGVIWARYNVP------WQPAFVFYRADGTST-FVNNP-TAAMSQDELSGRVAAL 134 (136)
T ss_dssp HH-------TCCSEEEECTTSHHHHHTTCC------SSSEEEEECTTSCEE-EECCS-SSCCCHHHHHHHHHHC
T ss_pred Hc-------CCCceEEECCchhHHHhcCCC------CCCEEEEECCCCcEE-EEEcC-CCccCHHHHHHHHHHH
Confidence 87 789999999999999999998 899999999999999 65411 1123577888887765
No 96
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=99.82 E-value=4.9e-25 Score=177.31 Aligned_cols=139 Identities=23% Similarity=0.329 Sum_probs=115.0
Q ss_pred CCCCCCCCCeEEeeecCCCceeEecccccCCcEEEEEEecCCCCCChHHHHHHHHH-HHHHHH-hcCcEEEEEeCCCH-H
Q 024201 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSD-RYTEFE-KLNTEILGVSTDSV-F 154 (271)
Q Consensus 78 ~~~G~~~Pdf~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~-~~~~~~-~~gv~vv~VS~d~~-~ 154 (271)
+.+|+++|+|++. +.+|+.+++++++|| ++||+|| ++|||+|+.+++.|.+ ++++++ +.++.+|+|+.|.. +
T Consensus 7 l~~g~~~p~f~l~---~~~g~~~~l~~~~gk-~vll~f~-a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~~~~ 81 (159)
T 2ls5_A 7 VRIGEMAPDFTIT---LTDGKQVTLSSLRGK-VVMLQFT-ASWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRDEPLE 81 (159)
Confidence 7799999999998 677889999999998 8999999 9999999999999998 999998 77999999999865 3
Q ss_pred HHHHHHHHhhhcCCCCCcccceEEcCChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHH
Q 024201 155 SHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQA 234 (271)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~ 234 (271)
..++|.+.+ +++|+++.|.+.++++.||+... .+|++||||++|+|++...+. ....++++++.|+.
T Consensus 82 ~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~~----~~P~~~lid~~G~i~~~~~g~--~~~~l~~~l~~l~~ 148 (159)
T 2ls5_A 82 KVLAFAKST-------GVTYPLGLDPGADIFAKYALRDA----GITRNVLIDREGKIVKLTRLY--NEEEFASLVQQINE 148 (159)
Confidence 456777776 78999999999999999996421 589999999999999986431 12234444444443
No 97
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=99.89 E-value=1.4e-23 Score=171.26 Aligned_cols=133 Identities=17% Similarity=0.223 Sum_probs=98.0
Q ss_pred CCCCCCCeEEeeecCCCceeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCC--------
Q 024201 80 VGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTD-------- 151 (271)
Q Consensus 80 ~G~~~Pdf~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d-------- 151 (271)
-|..+|+|+++ +.+|+.++|++++|| ++||+|| ++||+.|+ +++.|++++++|+++|+.||+|++|
T Consensus 8 ~~~~~~~f~l~---d~~G~~~~l~~~~Gk-~vll~F~-a~wC~~C~-~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~d 81 (171)
T 3cmi_A 8 HMSEFYKLAPV---DKKGQPFPFDQLKGK-VVLIVNV-ASKCGFTP-QYKELEALYKRYKDEGFTIIGFPCNQFGHQEPG 81 (171)
T ss_dssp --CGGGGCCCB---BTTSCBCCGGGGTTC-EEEEEEE-ESSSCCHH-HHHHHHHHHHHHGGGTEEEEEEEECSCC-----
T ss_pred chhheeeeEEE---cCCCCEecHHHcCCC-EEEEEEE-ecCCCcch-hHHHHHHHHHHhccCCeEEEEEECcccCCCCCC
Confidence 36789999998 778889999999998 9999999 99999999 9999999999999999999999984
Q ss_pred CHHHHHHHH-HHhhhcCCCCCcccceEEcCC--hH-H---H-----HHhCCccCCCCccce------EEEEEcCCCcEEE
Q 024201 152 SVFSHLAWV-QTDRKSGGLGDLKYPLIADIT--KS-I---S-----KSYGVLIPDQGIALR------GLFIIDKEGVIQH 213 (271)
Q Consensus 152 ~~~~~~~~~-~~~~~~~~~~~~~f~~l~D~~--~~-~---~-----~~ygv~~~~~g~~~P------~~~lID~~G~V~~ 213 (271)
+.+..++|. +.+ +++|+++.|.+ +. + . +.||+. .+| ++||||++|+|++
T Consensus 82 ~~~~~~~~~~~~~-------~~~~p~~~d~d~~~~~~~~~~~~~~~~~~~v~------~~P~i~~~~~~~lid~~G~i~~ 148 (171)
T 3cmi_A 82 SDEEIAQFCQLNY-------GVTFPIMKKIDVNGGNEDPVYKFLKSQKSGML------GLRGIKWNFEKFLVDKKGKVYE 148 (171)
T ss_dssp --------------------CCCSCBBCCCBSSSTTBCHHHHHHHHHSCCSS------SCCSCCSTTCEEEECSSSCEEE
T ss_pred CHHHHHHHHHhcc-------CCCceEEeeccCCCccchHHHHHHHhccCCcC------CCCcccccceEEEECCCCCEEE
Confidence 445667777 665 77899998643 22 1 1 346766 677 9999999999999
Q ss_pred EEeccCCCCCCHHHHHHHHHHH
Q 024201 214 STINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 214 ~~~~~~~~~~~~~e~l~~l~~l 235 (271)
.+.+.. +.+++.+.|+.+
T Consensus 149 ~~~g~~----~~~~l~~~i~~l 166 (171)
T 3cmi_A 149 RYSSLT----KPSSLSETIEEL 166 (171)
T ss_dssp EECTTS----CGGGGHHHHHHH
T ss_pred EeCCCC----CHHHHHHHHHHH
Confidence 976532 334556666555
No 98
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.88 E-value=2.7e-22 Score=162.66 Aligned_cols=134 Identities=19% Similarity=0.307 Sum_probs=110.7
Q ss_pred CCCCCCCCCeEEeeecCCCceeEecccc-cCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCC-CHHH
Q 024201 78 PLVGNTAPDFAAEAVFDQEFINVKLSDY-IGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTD-SVFS 155 (271)
Q Consensus 78 ~~~G~~~Pdf~l~~~~~~~g~~v~Lsd~-~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d-~~~~ 155 (271)
+.+|+++|+|++.++ +.+|+.++++++ +|| ++||+|| ++|||+|+.++|.|.+++++ ++.+++|+.| +.+.
T Consensus 22 ~~~G~~~P~f~l~~~-~~~g~~~~~~~~~~gk-~vll~F~-a~~C~~C~~~~~~l~~l~~~----~v~vv~v~~~~~~~~ 94 (168)
T 2b1k_A 22 ALIGKPVPKFRLESL-DNPGQFYQADVLTQGK-PVLLNVW-ATWCPTCRAEHQYLNQLSAQ----GIRVVGMNYKDDRQK 94 (168)
T ss_dssp TTTTSBCCCCEEEES-SSTTCEEEGGGGCCSS-CEEEEEE-CTTCHHHHHHHHHHHHHHHT----TCCEEEEEESCCHHH
T ss_pred cccCCcCCCeEeecc-cCCCcEeehhHhcCCC-EEEEEEE-CCCCHHHHHHHHHHHHHHHC----CCEEEEEECCCChHH
Confidence 679999999999854 226789999986 777 8999999 99999999999999988765 8999999975 4567
Q ss_pred HHHHHHHhhhcCCCCCcccc-eEEcCChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHH
Q 024201 156 HLAWVQTDRKSGGLGDLKYP-LIADITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQA 234 (271)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~f~-~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~ 234 (271)
..+|.+.+ +++|+ ++.|.+.++++.||+. .+|++||||++|+|++.+.+.. +.+++.+.|+.
T Consensus 95 ~~~~~~~~-------~~~~~~~~~d~~~~~~~~~~v~------~~P~~~lid~~G~i~~~~~g~~----~~~~l~~~l~~ 157 (168)
T 2b1k_A 95 AISWLKEL-------GNPYALSLFDGDGMLGLDLGVY------GAPETFLIDGNGIIRYRHAGDL----NPRVWEEEIKP 157 (168)
T ss_dssp HHHHHHHH-------CCCCSEEEEETTCHHHHHHTCC------SSSEEEEECTTSBEEEEEESCC----CHHHHHHTTHH
T ss_pred HHHHHHHc-------CCCCceeeECcchHHHHHcCcc------ccCEEEEECCCCeEEEEEeCCC----CHHHHHHHHHH
Confidence 78888887 67887 5789999999999999 8999999999999999876532 34555555544
Q ss_pred H
Q 024201 235 L 235 (271)
Q Consensus 235 l 235 (271)
+
T Consensus 158 ~ 158 (168)
T 2b1k_A 158 L 158 (168)
T ss_dssp H
T ss_pred H
Confidence 4
No 99
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.88 E-value=3.1e-22 Score=158.19 Aligned_cols=119 Identities=15% Similarity=0.167 Sum_probs=101.5
Q ss_pred CCCCCCC-eEEeeecCCCceeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHh-cCcEEEEEeCCC-HHHH
Q 024201 80 VGNTAPD-FAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEK-LNTEILGVSTDS-VFSH 156 (271)
Q Consensus 80 ~G~~~Pd-f~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~-~gv~vv~VS~d~-~~~~ 156 (271)
+|+.+|+ |++. +.+|+.+++++++|| ++||+|| ++||++|+.++|.|.++++++++ ++++||+|++|. .+..
T Consensus 3 ~~~~~P~~f~l~---~~~g~~~~l~~~~gk-~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~ 77 (144)
T 1i5g_A 3 LKKFFPYSTNVL---KGAAADIALPSLAGK-TVFFYFS-ASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDF 77 (144)
T ss_dssp TTTSCSSCSEEE---ETTEEEEEGGGGTTS-EEEEEEE-CTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHH
T ss_pred hhhhCCCceEEE---cCCCCEecHHHcCCC-EEEEEEE-CCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHH
Confidence 5889999 9998 678889999999998 8999999 89999999999999999999985 689999999985 5566
Q ss_pred HHHHHHhhhcCCCCCcccceEE-cCChHHHHHhCCccCCCCccceEEEEEc-CCCcEEEEE
Q 024201 157 LAWVQTDRKSGGLGDLKYPLIA-DITKSISKSYGVLIPDQGIALRGLFIID-KEGVIQHST 215 (271)
Q Consensus 157 ~~~~~~~~~~~~~~~~~f~~l~-D~~~~~~~~ygv~~~~~g~~~P~~~lID-~~G~V~~~~ 215 (271)
++|.+++ + ...++++. |.+.++++.|++. .+|+++||| ++|+|++.+
T Consensus 78 ~~~~~~~----~--~~~~~~~~~d~~~~~~~~~~v~------~~P~~~lid~~~G~i~~~~ 126 (144)
T 1i5g_A 78 KDYYAKM----P--WLALPFEDRKGMEFLTTGFDVK------SIPTLVGVEADSGNIITTQ 126 (144)
T ss_dssp HHHHTTC----S--SEECCTTCHHHHHHHHHHTTCC------SSSEEEEEETTTCCEEESC
T ss_pred HHHHHhC----C--ccccccCchHHHHHHHHHcCCC------CCCEEEEEECCCCcEEecc
Confidence 6676654 1 23455554 5568999999998 899999999 999999974
No 100
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.87 E-value=3.7e-22 Score=158.32 Aligned_cols=138 Identities=16% Similarity=0.202 Sum_probs=110.7
Q ss_pred CCCCCCCC-eEEeeecCCCceeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHh-cCcEEEEEeCCC-HHH
Q 024201 79 LVGNTAPD-FAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEK-LNTEILGVSTDS-VFS 155 (271)
Q Consensus 79 ~~G~~~Pd-f~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~-~gv~vv~VS~d~-~~~ 155 (271)
..|+.+|+ |++. +.+| .+++++++|| ++||+|| ++||++|+.+++.|.++++++++ ++++|++|++|. .+.
T Consensus 3 ~~~~~~P~~f~l~---~~~g-~~~l~~~~gk-~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~ 76 (146)
T 1o8x_A 3 GLDKYLPGIEKLR---RGDG-EVEVKSLAGK-LVFFYFS-ASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDG 76 (146)
T ss_dssp CGGGTSTTCCEEE---ETTE-EEEGGGGTTC-EEEEEEE-CTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHH
T ss_pred chHhhCCCceEEE---cCCC-CCcHHHhCCC-EEEEEEE-ccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHH
Confidence 46899999 9998 7788 9999999998 8999999 89999999999999999999984 689999999985 455
Q ss_pred HHHHHHHhhhcCCCCCcccceEE-cCChHHHHHhCCccCCCCccceEEEEEc-CCCcEEEEEeccCCCCCCHHHHHHHHH
Q 024201 156 HLAWVQTDRKSGGLGDLKYPLIA-DITKSISKSYGVLIPDQGIALRGLFIID-KEGVIQHSTINNLAIGRSVDETLRTLQ 233 (271)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~f~~l~-D~~~~~~~~ygv~~~~~g~~~P~~~lID-~~G~V~~~~~~~~~~~~~~~e~l~~l~ 233 (271)
.++|.+++ + ...+++.. |.+.++++.|++. .+|+++||| ++|+|++...
T Consensus 77 ~~~~~~~~----~--~~~~~~~~~d~~~~~~~~~~v~------~~Pt~~lid~~~G~i~~~~~----------------- 127 (146)
T 1o8x_A 77 FAGYFAKM----P--WLAVPFAQSEAVQKLSKHFNVE------SIPTLIGVDADSGDVVTTRA----------------- 127 (146)
T ss_dssp HHHHHTTC----S--SEECCGGGHHHHHHHHHHTTCC------SSSEEEEEETTTCCEEESCH-----------------
T ss_pred HHHHHHHC----C--ceeeccchhhHHHHHHHHhCCC------CCCEEEEEECCCCeEEEecc-----------------
Confidence 56666654 1 23555554 5568999999998 899999999 9999999741
Q ss_pred HHHHhhhCCCcccCCCCCCC
Q 024201 234 ALQYVQENPDEVCPAGWKPG 253 (271)
Q Consensus 234 ~l~~~~~~~~~~~p~~~~~~ 253 (271)
...+.+. ...|..+|++.
T Consensus 128 -~~~~~~~-~~~~~~~w~~~ 145 (146)
T 1o8x_A 128 -RATLVKD-PEGEQFPWKDA 145 (146)
T ss_dssp -HHHHTTC-TTCTTTTCCCC
T ss_pred -hhHHhhC-CccccCCCCCC
Confidence 1122333 46688888864
No 101
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.87 E-value=6.2e-22 Score=157.90 Aligned_cols=133 Identities=16% Similarity=0.250 Sum_probs=109.8
Q ss_pred CCCCCCCCCeEEeeecCCCc--------eeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEe
Q 024201 78 PLVGNTAPDFAAEAVFDQEF--------INVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVS 149 (271)
Q Consensus 78 ~~~G~~~Pdf~l~~~~~~~g--------~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS 149 (271)
+.+|+.+|+|++. +.+| +.+++++++|+ ++||+|| ++||++|..+++.|.+++++ .++.+++|+
T Consensus 8 ~~~g~~~p~f~l~---~~~g~~~~~~~~~~~~l~~~~gk-~~ll~f~-~~~C~~C~~~~~~l~~l~~~---~~v~~v~v~ 79 (156)
T 1kng_A 8 ALIGRPAPQTALP---PLEGLQADNVQVPGLDPAAFKGK-VSLVNVW-ASWCVPCHDEAPLLTELGKD---KRFQLVGIN 79 (156)
T ss_dssp ----CBCCCCCBC---CCTTCEETTEECCCBCGGGGTTS-CEEEEEE-CTTCHHHHHHHHHHHHHTTC---TTSEEEEEE
T ss_pred HHhCCCCCCceee---eccCcccccccCceechHHhCCC-EEEEEEE-cccCHhHHHHHHHHHHHHhc---CCeEEEEEE
Confidence 6789999999998 4455 79999999998 8999999 89999999999999998876 469999999
Q ss_pred CC-CHHHHHHHHHHhhhcCCCCCcccc-eEEcCChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHH
Q 024201 150 TD-SVFSHLAWVQTDRKSGGLGDLKYP-LIADITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDE 227 (271)
Q Consensus 150 ~d-~~~~~~~~~~~~~~~~~~~~~~f~-~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e 227 (271)
.| +.+..++|.+.+ +++|+ ++.|.+.++++.||+. .+|++||||++|+|++.+.+. .+.++
T Consensus 80 ~~~~~~~~~~~~~~~-------~~~~~~~~~d~~~~~~~~~~v~------~~P~~~~id~~G~i~~~~~g~----~~~~~ 142 (156)
T 1kng_A 80 YKDAADNARRFLGRY-------GNPFGRVGVDANGRASIEWGVY------GVPETFVVGREGTIVYKLVGP----ITPDN 142 (156)
T ss_dssp ESCCHHHHHHHHHHH-------CCCCSEEEEETTSHHHHHTTCC------SSCEEEEECTTSBEEEEEESC----CCHHH
T ss_pred CCCCHHHHHHHHHHc-------CCCCceeeeCchhHHHHhcCcC------ccCeEEEEcCCCCEEEEEeCC----CCHHH
Confidence 75 456778888887 78898 8889999999999999 899999999999999987543 24566
Q ss_pred HHHHHHHH
Q 024201 228 TLRTLQAL 235 (271)
Q Consensus 228 ~l~~l~~l 235 (271)
+.+.|+.+
T Consensus 143 l~~~l~~~ 150 (156)
T 1kng_A 143 LRSVLLPQ 150 (156)
T ss_dssp HHHTHHHH
T ss_pred HHHHHHHH
Confidence 66666654
No 102
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.86 E-value=6.4e-22 Score=159.31 Aligned_cols=133 Identities=12% Similarity=0.173 Sum_probs=109.1
Q ss_pred CCCCCCCCeEEeeecCCCceeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCC------
Q 024201 79 LVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDS------ 152 (271)
Q Consensus 79 ~~G~~~Pdf~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~------ 152 (271)
.+|+.+| ++. +.+|+.+++++++|| ++||+|| ++||++|+.++|.|.+++++|+.+|++||+|++|.
T Consensus 15 ~~~~~~p--~l~---~~~g~~~~~~~~~gk-~vlv~F~-a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~ 87 (164)
T 2h30_A 15 TVPHTMS--TMK---TADNRPASVYLKKDK-PTLIKFW-ASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKK 87 (164)
T ss_dssp CHHHHHT--TCE---ETTSSBGGGGCCTTS-CEEEEEC-CTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCCC
T ss_pred ccCCcCC--ccC---CCCCCEeeHHHhCCC-EEEEEEE-CCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCccccC
Confidence 3566666 454 667889999999998 8999999 99999999999999999999998999999999853
Q ss_pred HHHHHHHHHHhhhcCCCCCcc-cceEEcCChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHH
Q 024201 153 VFSHLAWVQTDRKSGGLGDLK-YPLIADITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRT 231 (271)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~-f~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~ 231 (271)
.....+|.+.+ ++. |++..|.+.++++.|++. .+|++||||++|+|++.+.+. .+.+++.+.
T Consensus 88 ~~~~~~~~~~~-------~~~~~~~~~d~~~~~~~~~~v~------~~P~~~lid~~G~i~~~~~g~----~~~~~l~~~ 150 (164)
T 2h30_A 88 DGEFQKWYAGL-------NYPKLPVVTDNGGTIAQNLNIS------VYPSWALIGKDGDVQRIVKGS----INEAQALAL 150 (164)
T ss_dssp TTHHHHHHTTS-------CCTTSCEEECTTCHHHHHTTCC------SSSEEEEECTTSCEEEEEESC----CCHHHHHHH
T ss_pred HHHHHHHHHhC-------CCCcceEEEcCchHHHHHcCCC------ccceEEEECCCCcEEEEEcCC----CCHHHHHHH
Confidence 33444554443 455 889999999999999998 899999999999999987553 356777777
Q ss_pred HHHH
Q 024201 232 LQAL 235 (271)
Q Consensus 232 l~~l 235 (271)
|+.+
T Consensus 151 i~~~ 154 (164)
T 2h30_A 151 IRNP 154 (164)
T ss_dssp HHCT
T ss_pred HHHH
Confidence 7755
No 103
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.86 E-value=1.3e-21 Score=154.39 Aligned_cols=119 Identities=19% Similarity=0.264 Sum_probs=99.0
Q ss_pred CCCCCCCCe-EEeeecCCCceeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHH-hcCcEEEEEeCCC-HHH
Q 024201 79 LVGNTAPDF-AAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFE-KLNTEILGVSTDS-VFS 155 (271)
Q Consensus 79 ~~G~~~Pdf-~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~-~~gv~vv~VS~d~-~~~ 155 (271)
.+|+.+|+| ++. +.+| .+++++++|| ++||+|| ++||++|+.++|.|.+++++++ ++++.+++|++|. .+.
T Consensus 3 ~~g~~~p~~~~l~---~~~g-~~~l~~~~gk-~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~ 76 (144)
T 1o73_A 3 GLAKYLPGATNLL---SKSG-EVSLGSLVGK-TVFLYFS-ASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESD 76 (144)
T ss_dssp GGGGTSCTTCCBB---CTTS-CBCSGGGTTC-EEEEEEE-CTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHH
T ss_pred chhhhCccceEee---cCCC-cCcHHHhCCC-EEEEEEE-CcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHH
Confidence 479999997 987 7888 9999999998 8999999 8999999999999999999998 4689999999986 344
Q ss_pred HHHHHHHhhhcCCCCCcccceEE-cCChHHHHHhCCccCCCCccceEEEEEc-CCCcEEEEE
Q 024201 156 HLAWVQTDRKSGGLGDLKYPLIA-DITKSISKSYGVLIPDQGIALRGLFIID-KEGVIQHST 215 (271)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~f~~l~-D~~~~~~~~ygv~~~~~g~~~P~~~lID-~~G~V~~~~ 215 (271)
.++|.+++ + ...+++.. |.+.++++.|++. .+|+++||| ++|+|++..
T Consensus 77 ~~~~~~~~----~--~~~~~~~~~~~~~~~~~~~~v~------~~Pt~~lid~~~G~i~~~~ 126 (144)
T 1o73_A 77 FHDYYGKM----P--WLALPFDQRSTVSELGKTFGVE------SIPTLITINADTGAIIGTQ 126 (144)
T ss_dssp HHHHHTTC----S--SEECCTTCHHHHHHHHHHHTCC------SSSEEEEEETTTCCEEESC
T ss_pred HHHHHHhC----C--ceEeeccchhHHHHHHHHcCCC------CCCEEEEEECCCCeEEecc
Confidence 45555543 1 23444443 4567899999998 899999999 899999874
No 104
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.84 E-value=5.5e-22 Score=161.41 Aligned_cols=120 Identities=18% Similarity=0.196 Sum_probs=100.2
Q ss_pred CCCCCCCCCe-EEeeecCCCceeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHh-cCcEEEEEeCCCH-H
Q 024201 78 PLVGNTAPDF-AAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEK-LNTEILGVSTDSV-F 154 (271)
Q Consensus 78 ~~~G~~~Pdf-~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~-~gv~vv~VS~d~~-~ 154 (271)
..+|+++|+| ++. +.+| .++|++++|| ++||+|| ++||++|+.++|.|.+++++|++ +++.||+|++|.. +
T Consensus 22 ~~vG~~~P~f~~l~---~~~g-~v~l~~~~gk-~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~ 95 (165)
T 3s9f_A 22 SGVAKHLGEALKLR---KQAD-TADMDSLSGK-TVFFYFS-ASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEED 95 (165)
T ss_dssp CHHHHHHHHTSCEE---ETTE-EECSGGGTTS-EEEEEEE-CTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHH
T ss_pred hhhcccCCcceeee---cCCC-cccHHHcCCC-EEEEEEE-CCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHH
Confidence 5689999999 887 7788 9999999998 9999999 99999999999999999999986 6899999999864 4
Q ss_pred HHHHHHHHhhhcCCCCCcccceEEcCC-hHHHHHhCCccCCCCccceEEEEEcCC-CcEEEEE
Q 024201 155 SHLAWVQTDRKSGGLGDLKYPLIADIT-KSISKSYGVLIPDQGIALRGLFIIDKE-GVIQHST 215 (271)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~f~~l~D~~-~~~~~~ygv~~~~~g~~~P~~~lID~~-G~V~~~~ 215 (271)
..++|.+++ ....+++..+.. .++++.|++. .+|++||||++ |+|++..
T Consensus 96 ~~~~~~~~~------~~~~~~~~~~~~~~~l~~~~~v~------~~Pt~~lid~~~G~iv~~~ 146 (165)
T 3s9f_A 96 DFNAYYAKM------PWLSIPFANRNIVEALTKKYSVE------SIPTLIGLNADTGDTVTTR 146 (165)
T ss_dssp HHHHHHTTC------SSEECCTTCHHHHHHHHHHTTCC------SSSEEEEEETTTCCEEESC
T ss_pred HHHHHHHhC------CCcccccCchhHHHHHHHHcCCC------CCCEEEEEeCCCCEEEecc
Confidence 445555543 123444444333 7999999998 89999999998 9999974
No 105
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=99.73 E-value=2.1e-22 Score=158.41 Aligned_cols=121 Identities=17% Similarity=0.239 Sum_probs=98.9
Q ss_pred CCCCCeEEeeecCCCceeEeccc-ccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHh--cCcEEEEEeCCC-HHHHH
Q 024201 82 NTAPDFAAEAVFDQEFINVKLSD-YIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEK--LNTEILGVSTDS-VFSHL 157 (271)
Q Consensus 82 ~~~Pdf~l~~~~~~~g~~v~Lsd-~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~--~gv~vv~VS~d~-~~~~~ 157 (271)
+.+|+|++. +.+|+.+++++ ++||+++||+|| ++|||+|+.++|.|.++++++++ .++.+++|++|. .+..+
T Consensus 2 ~~~p~~~l~---~~~g~~~~l~~~~~gk~~vll~F~-a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~ 77 (143)
T 2lus_A 2 EFIQGIKLV---KKNRCEVNANEALKDKDIIGFYFS-AHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMF 77 (143)
Confidence 458999998 66788999999 999768999999 89999999999999999999953 589999999985 34556
Q ss_pred HHHHHhhhcCCCCCcccceEEcCChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEe
Q 024201 158 AWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTI 216 (271)
Q Consensus 158 ~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~ 216 (271)
+|.+.+ +.....+++..|...++++.||+. .+|+++|||++|+|++.+.
T Consensus 78 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~v~------~~P~~~lid~~G~i~~~~~ 126 (143)
T 2lus_A 78 QYMMES----HGDWLAIPYRSGPASNVTAKYGIT------GIPALVIVKKDGTLISMNG 126 (143)
Confidence 676665 111223445566668899999998 8999999999999999853
No 106
>4h86_A Peroxiredoxin type-2; oxidoreductase; 2.00A {Saccharomyces cerevisiae} PDB: 4dsq_A 4dsr_A 4dss_A
Probab=99.77 E-value=4.8e-18 Score=140.93 Aligned_cols=152 Identities=19% Similarity=0.295 Sum_probs=117.3
Q ss_pred CcCCCCCCCCC--CeEEeeec----C------CCceeEecccc--cCCcEEEEEEecCCCCCChHH-HHHHHHHHHHHH-
Q 024201 75 EIPPLVGNTAP--DFAAEAVF----D------QEFINVKLSDY--IGKKYVILFFYPLDFTFVCPT-EITAFSDRYTEF- 138 (271)
Q Consensus 75 ~~~~~~G~~~P--df~l~~~~----~------~~g~~v~Lsd~--~gkk~vvL~F~~~t~Cp~C~~-~l~~L~~~~~~~- 138 (271)
.|...+|+++| |+++..+- + ...++++++++ +|| .|||+++|++|+|.|.. ++|.+.+.++++
T Consensus 23 ~~~~~v~~~~P~gdv~f~yip~~~~~~~~~~c~~P~~v~ls~~~~k~K-kVVLf~vPGAFTPtCS~~hlPgf~~~~d~~~ 101 (199)
T 4h86_A 23 SMSDLVNKKFPAGDYKFQYIAISQSDADSESCKMPQTVEWSKLISENK-KVIITGAPAAFSPTCTVSHIPGYINYLDELV 101 (199)
T ss_dssp CBCTTTTSBCCCTTCEEEECCCCSSSTTSGGGTSCEEEEHHHHHHHCS-EEEEEECSCTTCHHHHHTTHHHHHHHHHHHH
T ss_pred hhHHHhCCCCCCCCceEEEecCCccccccccCCCCeeeEHHHHhcCCC-eEEEEEeCCCcCCcCChhhChHHHHHHHHHH
Confidence 34467899999 57766553 1 22357888876 577 79999999999999986 699999999875
Q ss_pred HhcCc-EEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHHHhCCccCCCCc---cceEEEEEcCCCcEEEE
Q 024201 139 EKLNT-EILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGI---ALRGLFIIDKEGVIQHS 214 (271)
Q Consensus 139 ~~~gv-~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ygv~~~~~g~---~~P~~~lID~~G~V~~~ 214 (271)
+.+|+ +|++||+|+++.+.+|.+.+... ....++++.|.+.+++++||+..+..+. ..|..+||| ||+|.+.
T Consensus 102 k~kGvd~I~ciSVND~FVm~AW~k~~~~~---~~~~i~~laD~~~eftkalGl~~~~~~gg~RS~Rya~IVd-DGvV~~~ 177 (199)
T 4h86_A 102 KEKEVDQVIVVTVDNPFANQAWAKSLGVK---DTTHIKFASDPGCAFTKSIGFELAVGDGVYWSGRWAMVVE-NGIVTYA 177 (199)
T ss_dssp HHSCCCEEEEEESSCHHHHHHHHHHTTCC---CCSSEEEEECGGGHHHHHTTCEEEEETTEEEECSEEEEEE-TTEEEEE
T ss_pred HhcCCcEEEEEEcCCHHHHHHHHHHhccc---ccccccccCCcchHHHHhcCceeecCCCcceeeEEEEEEE-CCEEEEE
Confidence 78898 68889999999999999987322 1346889999999999999997654322 458889998 9999999
Q ss_pred EeccCC---C-CCCHHHHHHH
Q 024201 215 TINNLA---I-GRSVDETLRT 231 (271)
Q Consensus 215 ~~~~~~---~-~~~~~e~l~~ 231 (271)
++.+.. . ...++.+|+.
T Consensus 178 ~vE~~pg~~~~vS~ae~vL~~ 198 (199)
T 4h86_A 178 AKETNPGTDVTVSSVESVLAH 198 (199)
T ss_dssp EECSSTTTCCSTTSHHHHHTT
T ss_pred EEeCCCCCCCcccCHHHHHhc
Confidence 887532 1 2356777654
No 107
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.56 E-value=1.1e-14 Score=112.04 Aligned_cols=111 Identities=14% Similarity=0.064 Sum_probs=84.9
Q ss_pred CCCCeEEeeecCCCceeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHH
Q 024201 83 TAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQT 162 (271)
Q Consensus 83 ~~Pdf~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~ 162 (271)
.+++++.. +.+|.........|+ ++||+|| ++||++|+...+.|.+++++++ .++.++.|+.+
T Consensus 5 ~~~~l~~~---~~~~~~~~~~~~~~k-~~lv~f~-a~wC~~C~~~~~~l~~~~~~~~-~~v~~~~v~~~----------- 67 (126)
T 2l57_A 5 GIKQINFQ---SINVVENLEEAKEGI-PTIIMFK-TDTCPYCVEMQKELSYVSKERE-GKFNIYYARLE----------- 67 (126)
T ss_dssp CSSCTTTT---CCSEESSTTTCCSSS-CEEEEEE-CSSCHHHHHHHHHHHHHHHHSS-SSCEEEEEETT-----------
T ss_pred ccCCCCcc---ccchhHHHHHHhCCC-cEEEEEE-CCCCccHHHHHHHHHHHHHHhc-CCeEEEEEeCC-----------
Confidence 45555554 333334445555666 8999999 9999999999999999999987 57999999955
Q ss_pred hhhcCCCCCcccceEEcCChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHH
Q 024201 163 DRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 163 ~~~~~~~~~~~f~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l 235 (271)
.|.+.++++.|++. .+|+++++|++|+++....+. ...+++.+.|+.+
T Consensus 68 ---------------~d~~~~~~~~~~v~------~~Pt~~~~~~~G~~~~~~~G~----~~~~~l~~~l~~~ 115 (126)
T 2l57_A 68 ---------------EEKNIDLAYKYDAN------IVPTTVFLDKEGNKFYVHQGL----MRKNNIETILNSL 115 (126)
T ss_dssp ---------------SSHHHHHHHHTTCC------SSSEEEEECTTCCEEEEEESC----CCHHHHHHHHHHH
T ss_pred ---------------CCchHHHHHHcCCc------ceeEEEEECCCCCEEEEecCC----CCHHHHHHHHHHH
Confidence 12235788899998 899999999999999886542 3567788777765
No 108
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.54 E-value=5.7e-15 Score=118.41 Aligned_cols=125 Identities=14% Similarity=0.074 Sum_probs=94.2
Q ss_pred CCCCCCCCCeEEeeecCCCceeEecccccCCcEEEEEEecCCCCCChHHHHHHH---HHHHHHHHhcCcEEEEEeCCCHH
Q 024201 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAF---SDRYTEFEKLNTEILGVSTDSVF 154 (271)
Q Consensus 78 ~~~G~~~Pdf~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L---~~~~~~~~~~gv~vv~VS~d~~~ 154 (271)
...+...++| . + .++.+.+++++|| ++||+||.++||++|+.+.|.| .++.+.+. .++.++.|..+...
T Consensus 24 ~~~~~~~~~~--~---~-~~~~~~~a~~~gk-~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~-~~~~~v~vd~~~~~ 95 (154)
T 2ju5_A 24 RPIAAANLQW--E---S-YAEALEHSKQDHK-PIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAG-VHLHMVEVDFPQKN 95 (154)
T ss_dssp CSSCCCCCCE--E---C-HHHHHHHHHHHCC-CEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHH-HHCEEEEEECCSSC
T ss_pred hhcccCCCCC--C---C-HHHHHHHHHhCCC-eEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhc-CcEEEEEecCcccc
Confidence 3456666676 3 2 3558888889998 8999999679999999999999 66655543 46888888877532
Q ss_pred HHHHHHHHhhhcCCCCCcccceEEcCChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHH
Q 024201 155 SHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQA 234 (271)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~ 234 (271)
++.+++ .|.+.++++.|++. .+|+++|||++|+++... +.. ....+++++.|+.
T Consensus 96 ----------------~~~~~~-~~~~~~l~~~~~v~------~~Pt~~~~d~~G~~~~~~-G~~--~~~~~~l~~~l~~ 149 (154)
T 2ju5_A 96 ----------------HQPEEQ-RQKNQELKAQYKVT------GFPELVFIDAEGKQLARM-GFE--PGGGAAYVSKVKS 149 (154)
T ss_dssp ----------------CCCHHH-HHHHHHHHHHTTCC------SSSEEEEECTTCCEEEEE-CCC--TTCHHHHHHHHHH
T ss_pred ----------------CCChhh-HhhHHHHHHHcCCC------CCCEEEEEcCCCCEEEEe-cCC--CCCHHHHHHHHHH
Confidence 123332 45568899999999 899999999999999986 432 3467888888876
Q ss_pred HH
Q 024201 235 LQ 236 (271)
Q Consensus 235 l~ 236 (271)
+.
T Consensus 150 ~l 151 (154)
T 2ju5_A 150 AL 151 (154)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 109
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.54 E-value=1.3e-15 Score=119.08 Aligned_cols=118 Identities=18% Similarity=0.172 Sum_probs=87.7
Q ss_pred CCCCCCCCeEEeeecCCCceeEecccccCCcEEEEEEecCCCCCChHHHHHHH---HHHHHHHHhcCcEEEEEeCCCHHH
Q 024201 79 LVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAF---SDRYTEFEKLNTEILGVSTDSVFS 155 (271)
Q Consensus 79 ~~G~~~Pdf~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L---~~~~~~~~~~gv~vv~VS~d~~~~ 155 (271)
..|..+|+|... .+.++....+++++|+ ++||+|| ++||++|+...+.+ .++.++++ ++.++.|+++...
T Consensus 5 ~~~~~~~~f~~~--~~~~~~~~~l~~~~~k-~vlv~F~-a~wC~~C~~~~~~~~~~~~l~~~~~--~~~~~~vd~~~~~- 77 (134)
T 2fwh_A 5 AQTQTHLNFTQI--KTVDELNQALVEAKGK-PVMLDLY-ADWCVACKEFEKYTFSDPQVQKALA--DTVLLQANVTAND- 77 (134)
T ss_dssp -----CCCCEEC--CSHHHHHHHHHHHTTS-CEEEEEE-CTTCHHHHHHHHHTTTSHHHHHHTT--TSEEEEEECTTCC-
T ss_pred cccccCCCcEEe--cCHHHHHHHHHHhcCC-cEEEEEE-CCCCHHHHHHHHHhcCCHHHHHHhc--CcEEEEEeCCCCc-
Confidence 468889999732 2555556778888887 8999999 99999999999988 88888876 6999999887521
Q ss_pred HHHHHHHhhhcCCCCCcccceEEcCChHHHHHhCCccCCCCccceEEEEEcCCCcEE--EEEeccCCCCCCHHHHHHHHH
Q 024201 156 HLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQ--HSTINNLAIGRSVDETLRTLQ 233 (271)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~--~~~~~~~~~~~~~~e~l~~l~ 233 (271)
|...++++.||+. .+|+++|+|++|+++ .+..+. ...+++.+.|+
T Consensus 78 -----------------------~~~~~l~~~~~v~------~~Pt~~~~d~~G~~v~~~~~~G~----~~~~~l~~~l~ 124 (134)
T 2fwh_A 78 -----------------------AQDVALLKHLNVL------GLPTILFFDGQGQEHPQARVTGF----MDAETFSAHLR 124 (134)
T ss_dssp -----------------------HHHHHHHHHTTCC------SSSEEEEECTTSCBCGGGCBCSC----CCHHHHHHHHH
T ss_pred -----------------------chHHHHHHHcCCC------CCCEEEEECCCCCEeeeeeeeec----cCHHHHHHHHH
Confidence 2346788999998 899999999999998 444332 35678888877
Q ss_pred HHH
Q 024201 234 ALQ 236 (271)
Q Consensus 234 ~l~ 236 (271)
.++
T Consensus 125 ~~~ 127 (134)
T 2fwh_A 125 DRQ 127 (134)
T ss_dssp HC-
T ss_pred hcC
Confidence 664
No 110
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.46 E-value=7.3e-13 Score=103.69 Aligned_cols=100 Identities=16% Similarity=0.250 Sum_probs=82.5
Q ss_pred CCCceeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcc
Q 024201 94 DQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLK 173 (271)
Q Consensus 94 ~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~ 173 (271)
+.+|..+.++++.|+ ++||+|| ++||++|+...|.|.++++++.+ ++.++.|.+|.
T Consensus 38 ~~~~~~~~l~~~~~k-~vlv~f~-a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~--------------------- 93 (141)
T 3hxs_A 38 DYENHSKEWKYLGDK-PAIVDFY-ADWCGPCKMVAPILEELSKEYAG-KIYIYKVNVDK--------------------- 93 (141)
T ss_dssp CCSSCCCCCCCCCSS-CEEEEEE-CTTCTTHHHHHHHHHHHHHHTTT-TCEEEEEETTT---------------------
T ss_pred ccccchhHHHHhCCC-EEEEEEE-CCCCHHHHHHHHHHHHHHHHhcC-ceEEEEEECCC---------------------
Confidence 566778899999888 8999999 99999999999999999999875 58888887653
Q ss_pred cceEEcCChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHH
Q 024201 174 YPLIADITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 174 f~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l 235 (271)
+.++++.|++. .+|+++++|++|+++ .+.+. .+.+++.+.|+.+
T Consensus 94 -------~~~~~~~~~v~------~~Pt~~~~~~~g~~~-~~~G~----~~~~~l~~~l~~~ 137 (141)
T 3hxs_A 94 -------EPELARDFGIQ------SIPTIWFVPMKGEPQ-VNMGA----LSKEQLKGYIDKV 137 (141)
T ss_dssp -------CHHHHHHTTCC------SSSEEEEECSSSCCE-EEESC----CCHHHHHHHHHHT
T ss_pred -------CHHHHHHcCCC------CcCEEEEEeCCCCEE-EEeCC----CCHHHHHHHHHHH
Confidence 34688999999 899999999999987 43332 3567787777755
No 111
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.41 E-value=1.1e-12 Score=101.81 Aligned_cols=99 Identities=13% Similarity=0.198 Sum_probs=77.5
Q ss_pred ccccCCcEEEEEEecCCCCCChHHHHHHHH--HHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcC
Q 024201 103 SDYIGKKYVILFFYPLDFTFVCPTEITAFS--DRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADI 180 (271)
Q Consensus 103 sd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~--~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~ 180 (271)
....|+ ++||+|| ++||++|+...|.|. ++.+++++ ++.++.|+++. .|.
T Consensus 25 ~~~~~k-~vlv~f~-a~wC~~C~~~~~~l~~~~~~~~~~~-~~~~~~vd~~~-------------------------~~~ 76 (133)
T 3fk8_A 25 GKRTHK-PTLLVFG-ANWCTDCRALDKSLRNQKNTALIAK-HFEVVKIDVGN-------------------------FDR 76 (133)
T ss_dssp HHHHTC-CEEEEEE-CTTCHHHHHHHHHHTSHHHHHHHHH-HCEEEEEECTT-------------------------TTS
T ss_pred HHhcCC-cEEEEEc-CCCCHHHHHHHHHhCCHHHHHHhcC-CEEEEEEeCCc-------------------------ccc
Confidence 334577 8999999 999999999999999 89888864 69999998863 134
Q ss_pred ChHHHHHhCC---ccCCCCccceEEEEEcCCCcEEEEEeccCCC---CCCHHHHHHHHHHH
Q 024201 181 TKSISKSYGV---LIPDQGIALRGLFIIDKEGVIQHSTINNLAI---GRSVDETLRTLQAL 235 (271)
Q Consensus 181 ~~~~~~~ygv---~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~---~~~~~e~l~~l~~l 235 (271)
+.++++.|++ . .+|+++++|++|+++....+..-. ....+++.+.|+.+
T Consensus 77 ~~~l~~~~~v~~~~------~~Pt~~~~d~~G~~~~~~~g~~~~~~~~~~~~~l~~~l~~l 131 (133)
T 3fk8_A 77 NLELSQAYGDPIQD------GIPAVVVVNSDGKVRYTTKGGELANARKMSDQGIYDFFAKI 131 (133)
T ss_dssp SHHHHHHTTCGGGG------CSSEEEEECTTSCEEEECCSCTTTTGGGSCHHHHHHHHHHH
T ss_pred hHHHHHHhCCccCC------ccceEEEECCCCCEEEEecCCcccccccCCHHHHHHHHHHh
Confidence 5778999999 7 899999999999999996552211 23566777776655
No 112
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.40 E-value=1.1e-12 Score=101.24 Aligned_cols=107 Identities=13% Similarity=0.267 Sum_probs=80.1
Q ss_pred CCCCCCCeEEeeecCCCceeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHH
Q 024201 80 VGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAW 159 (271)
Q Consensus 80 ~G~~~Pdf~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~ 159 (271)
...++|+++. .+++.++....+|+ ++||+|| ++||++|+.+.|.+.++++++++ ++.++.|..|.
T Consensus 20 ~~~~~~~~~~-----~~~~~~~~~~~~~k-~vlv~F~-a~wC~~C~~~~p~l~~~~~~~~~-~v~~~~vd~d~------- 84 (128)
T 3ul3_B 20 MFKKVPRLQQ-----NGSNIINGVNMKNT-VIVLYFF-AKWCQACTMQSTEMDKLQKYYGK-RIYLLKVDLDK------- 84 (128)
T ss_dssp ------CCCC-----CCCSSSSBTTSCCS-EEEEEEE-CTTCHHHHHHHHHHHHHHHHHGG-GEEEEEEEGGG-------
T ss_pred HhccCCcccc-----CCccHHHHHHccCC-EEEEEEE-CCCCHHHHHHhHHHHHHHHHhcC-CeEEEEEECCC-------
Confidence 4566777763 33446777777887 8999999 99999999999999999999974 68888887542
Q ss_pred HHHhhhcCCCCCcccceEEcCChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHH
Q 024201 160 VQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQ 233 (271)
Q Consensus 160 ~~~~~~~~~~~~~~f~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~ 233 (271)
+.++++.|++. .+|+++++ ++|+++....+. ...+++.+.|+
T Consensus 85 ---------------------~~~l~~~~~v~------~~Pt~~~~-~~G~~~~~~~G~----~~~~~l~~~l~ 126 (128)
T 3ul3_B 85 ---------------------NESLARKFSVK------SLPTIILL-KNKTMLARKDHF----VSSNDLIALIK 126 (128)
T ss_dssp ---------------------CHHHHHHTTCC------SSSEEEEE-ETTEEEEEESSC----CCHHHHHHHHT
T ss_pred ---------------------CHHHHHHcCCC------CcCEEEEE-ECCEEEEEecCC----CCHHHHHHHHH
Confidence 34789999999 89999999 799999886442 45667766654
No 113
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.36 E-value=2.2e-12 Score=99.43 Aligned_cols=99 Identities=16% Similarity=0.176 Sum_probs=76.1
Q ss_pred eEecccccCCcEEEEEEecCCCCCChHHHHHHH---HHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccc
Q 024201 99 NVKLSDYIGKKYVILFFYPLDFTFVCPTEITAF---SDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYP 175 (271)
Q Consensus 99 ~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L---~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~ 175 (271)
.+.+++..|+ ++||+|| ++||++|+.+.+.+ .++.+.++ .++.++.|..+.
T Consensus 19 ~~~~~~~~~k-~vlv~f~-a~wC~~C~~~~~~~~~~~~~~~~~~-~~~~~~~vd~~~----------------------- 72 (130)
T 2kuc_A 19 ALKRAEVEDK-LLFVDCF-TTWCGPCKRLSKVVFKDSLVADYFN-RHFVNLKMDMEK----------------------- 72 (130)
T ss_dssp HHHHHHHHSS-CEEEEEC-CTTCTHHHHHHHHGGGCHHHHHHHH-HHSEEEEECSSS-----------------------
T ss_pred HHHHHHhcCC-eEEEEEE-CCCCccHHHHHHHhcCcHHHHHHHh-cCeEEEEEecCC-----------------------
Confidence 5666667787 8999999 99999999999998 55555544 357777776653
Q ss_pred eEEcCChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHHH
Q 024201 176 LIADITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQ 236 (271)
Q Consensus 176 ~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l~ 236 (271)
|.+.++++.|++. .+|+++|+|++|+++....+. ...+++.+.|+.+.
T Consensus 73 ---~~~~~~~~~~~v~------~~Pt~~~~d~~G~~~~~~~G~----~~~~~l~~~l~~~~ 120 (130)
T 2kuc_A 73 ---GEGVELRKKYGVH------AYPTLLFINSSGEVVYRLVGA----EDAPELLKKVKLGV 120 (130)
T ss_dssp ---TTHHHHHHHTTCC------SSCEEEEECTTSCEEEEEESC----CCHHHHHHHHHHHH
T ss_pred ---cchHHHHHHcCCC------CCCEEEEECCCCcEEEEecCC----CCHHHHHHHHHHHH
Confidence 2346789999998 899999999999999886543 35677888877654
No 114
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.34 E-value=9.9e-12 Score=93.13 Aligned_cols=89 Identities=18% Similarity=0.215 Sum_probs=71.4
Q ss_pred cccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChH
Q 024201 104 DYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKS 183 (271)
Q Consensus 104 d~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~ 183 (271)
+..|+ ++||+|| ++||++|+...|.|.+++++++ ++.++.|..++ .+.+
T Consensus 21 ~~~~~-~vlv~f~-a~wC~~C~~~~~~l~~~~~~~~--~v~~~~vd~~~---------------------------~~~~ 69 (111)
T 2pu9_C 21 AAGDK-PVVLDMF-TQWCGPSKAMAPKYEKLAEEYL--DVIFLKLDCNQ---------------------------ENKT 69 (111)
T ss_dssp TCTTS-CEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSS---------------------------TTHH
T ss_pred hcCCC-EEEEEEE-CCcCHhHHHHCHHHHHHHHHCC--CeEEEEEecCc---------------------------chHH
Confidence 33566 8999999 8999999999999999999886 58898888763 2467
Q ss_pred HHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHH
Q 024201 184 ISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 184 ~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l 235 (271)
+++.|++. .+|+ ++++++|+++....+. ..+++.+.|+.+
T Consensus 70 ~~~~~~v~------~~Pt-~~~~~~G~~~~~~~G~-----~~~~l~~~l~~~ 109 (111)
T 2pu9_C 70 LAKELGIR------VVPT-FKILKENSVVGEVTGA-----KYDKLLEAIQAA 109 (111)
T ss_dssp HHHHHCCS------BSSE-EEEESSSSEEEEEESS-----CHHHHHHHHHHH
T ss_pred HHHHcCCC------eeeE-EEEEeCCcEEEEEcCC-----CHHHHHHHHHHh
Confidence 88999998 8998 6777999999886542 366777777654
No 115
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.33 E-value=2.3e-14 Score=116.46 Aligned_cols=122 Identities=15% Similarity=0.084 Sum_probs=77.1
Q ss_pred eEecccccCCcEEEEEEecCCCCCChHHHHHHH---HHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccc
Q 024201 99 NVKLSDYIGKKYVILFFYPLDFTFVCPTEITAF---SDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYP 175 (271)
Q Consensus 99 ~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L---~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~ 175 (271)
.+.+...+|| ++||+|| ++||++|+.+.+.+ .++.+.+++ ++.++.|+.|............ ..+ ....+.
T Consensus 39 ~~~~a~~~gk-~vlv~F~-A~WC~~C~~~~~~~~~~~~~~~~~~~-~~~~v~v~~d~~~~~~~~~~~~--~~~-~~~~~~ 112 (172)
T 3f9u_A 39 GMEYARQHNK-PVMLDFT-GYGCVNCRKMELAVWTDPKVSSIINN-DYVLITLYVDNKTPLTEPVKIM--ENG-TERTLR 112 (172)
T ss_dssp HHHHHHHTTC-CEEEEEE-CTTCHHHHHHHHHTTTSHHHHHHHHH-HCEEEEEETTCCCEEEEEEEEE--ETT-EEEEEE
T ss_pred HHHHHHHcCC-eEEEEEE-CCCCHHHHHHHHHhcCCHHHHHHhcC-CEEEEEEecCcccccchhhhhh--hcc-hhhhhh
Confidence 4566667788 9999999 99999999864333 445555544 6999999998633211000000 000 011112
Q ss_pred eEEcCChHH-HHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHH
Q 024201 176 LIADITKSI-SKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 176 ~l~D~~~~~-~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l 235 (271)
.+.|....+ .+.|++. .+|+++|||++|+++....+.. .+.+++++.|+.+
T Consensus 113 ~~~~~~~~~~~~~~~v~------~~Pt~~lid~~G~~~~~~~G~~---~~~~~l~~~l~~~ 164 (172)
T 3f9u_A 113 TVGDKWSYLQRVKFGAN------AQPFYVLIDNEGNPLNKSYAYD---EDISKYINFLQTG 164 (172)
T ss_dssp EHHHHHHHHHHHHHSCC------CSSEEEEECTTSCBSSCCBCSC---CCHHHHHHHHHHH
T ss_pred hhhhhhhHHHHHHcCCC------CcceEEEECCCCCEEeeccCCC---CCHHHHHHHHHHH
Confidence 222222333 5899999 8999999999999999865432 2377777777654
No 116
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.32 E-value=1.4e-11 Score=96.08 Aligned_cols=90 Identities=17% Similarity=0.311 Sum_probs=72.8
Q ss_pred cCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHH
Q 024201 106 IGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSIS 185 (271)
Q Consensus 106 ~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~ 185 (271)
++++++||+|| ++||++|+...|.|.++++++++ ++.++.|.+|. +.+++
T Consensus 36 ~~~k~~lv~f~-a~wC~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~~----------------------------~~~l~ 85 (136)
T 2l5l_A 36 EGDKPAIVDFY-ADWCGPCKMVAPILDELAKEYDG-QIVIYKVDTEK----------------------------EQELA 85 (136)
T ss_dssp CCSSCEEEEEE-CTTSHHHHHHHHHHHHHHHHTTT-TCEEEEEETTT----------------------------CHHHH
T ss_pred cCCCEEEEEEE-CCcCHHHHHHHHHHHHHHHHhcC-CEEEEEEeCCC----------------------------CHHHH
Confidence 34458999999 99999999999999999999874 48888887753 34788
Q ss_pred HHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHHH
Q 024201 186 KSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQ 236 (271)
Q Consensus 186 ~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l~ 236 (271)
+.|++. .+|+++++|++|+++ ...+ ..+.+++.+.|+.+.
T Consensus 86 ~~~~v~------~~Pt~~~~~~~G~~~-~~~G----~~~~~~l~~~l~~~~ 125 (136)
T 2l5l_A 86 GAFGIR------SIPSILFIPMEGKPE-MAQG----AMPKASFKKAIDEFL 125 (136)
T ss_dssp HHTTCC------SSCEEEEECSSSCCE-EEES----CCCHHHHHHHHHHHH
T ss_pred HHcCCC------CCCEEEEECCCCcEE-EEeC----CCCHHHHHHHHHHHh
Confidence 899998 899999999999988 3333 245778888887653
No 117
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.30 E-value=9.4e-12 Score=99.15 Aligned_cols=110 Identities=13% Similarity=0.129 Sum_probs=83.1
Q ss_pred CCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHH
Q 024201 107 GKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISK 186 (271)
Q Consensus 107 gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~ 186 (271)
++ ++||+|| ++||++|+.+.|.|.+++++++++ +.++.|.+|. +.++++
T Consensus 23 ~k-~vlv~F~-a~WC~~C~~~~p~l~~l~~~~~~~-~~~~~vd~d~----------------------------~~~l~~ 71 (149)
T 3gix_A 23 EK-VLVLRFG-RDEDPVCLQLDDILSKTSSDLSKM-AAIYLVDVDQ----------------------------TAVYTQ 71 (149)
T ss_dssp SS-EEEEEEE-CTTSHHHHHHHHHHHHHHTTTTTT-EEEEEEETTT----------------------------CCHHHH
T ss_pred CC-EEEEEEE-CCCCHHHHHHHHHHHHHHHHccCc-eEEEEEECCc----------------------------CHHHHH
Confidence 55 9999999 999999999999999999988643 7888776642 356889
Q ss_pred HhCCccCCCCccceEEEEEcCCCcEEEEEeccCC----C--CCCHHHHHHHHHHHHHhhhCCCcccCCCCCCCC
Q 024201 187 SYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLA----I--GRSVDETLRTLQALQYVQENPDEVCPAGWKPGD 254 (271)
Q Consensus 187 ~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~----~--~~~~~e~l~~l~~l~~~~~~~~~~~p~~~~~~~ 254 (271)
.|++. .+|+++ ++++|+++....+... . ..+.+++.+.|+.+....++....+-.++++.+
T Consensus 72 ~~~v~------~~Pt~~-~~~~G~~v~~~~g~~~~~~~~G~~~~~~~l~~~l~~~~~~~~~g~~~~~s~~~~~~ 138 (149)
T 3gix_A 72 YFDIS------YIPSTV-FFFNGQHMKVDYGSPDHTKFVGSFKTKQDFIDLIEVIYRGAMRGKLIVQSPIDPKN 138 (149)
T ss_dssp HTTCC------SSSEEE-EEETTEEEEEECSSSCCSCEESCCSSHHHHHHHHHHHHHHHHTTCSEEECCSCGGG
T ss_pred HcCCC------ccCeEE-EEECCeEEEeecCCCCCCeEeeecCCHHHHHHHHHHHHHHhhcCCceEECCccccc
Confidence 99998 899998 6689999944332111 1 245788888888875555555677777777665
No 118
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.29 E-value=2e-11 Score=91.57 Aligned_cols=89 Identities=17% Similarity=0.265 Sum_probs=69.6
Q ss_pred cccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCC
Q 024201 102 LSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADIT 181 (271)
Q Consensus 102 Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~ 181 (271)
+.+..++ ++||.|| ++||++|+...|.+.++.+++. ++.++.|.+| .+
T Consensus 15 l~~~~~k-~vvv~F~-a~wC~~C~~~~p~~~~~~~~~~--~~~~~~vd~d----------------------------~~ 62 (105)
T 3zzx_A 15 LNEAGNK-LVVIDFY-ATWCGPCKMIAPKLEELSQSMS--DVVFLKVDVD----------------------------EC 62 (105)
T ss_dssp HHHTTTS-EEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TEEEEEEETT----------------------------TC
T ss_pred HHhcCCC-EEEEEEE-CCCCCCccCCCcchhhhhhccC--CeEEEEEecc----------------------------cC
Confidence 3344455 8999999 9999999999999999998875 5777766654 24
Q ss_pred hHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHH
Q 024201 182 KSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQA 234 (271)
Q Consensus 182 ~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~ 234 (271)
.++++.|||. .+|+++++ ++|+++....+ .+.+++.+.|+.
T Consensus 63 ~~l~~~~~V~------~~PT~~~~-~~G~~v~~~~G-----~~~~~l~~~i~k 103 (105)
T 3zzx_A 63 EDIAQDNQIA------CMPTFLFM-KNGQKLDSLSG-----ANYDKLLELVEK 103 (105)
T ss_dssp HHHHHHTTCC------BSSEEEEE-ETTEEEEEEES-----CCHHHHHHHHHH
T ss_pred HHHHHHcCCC------eecEEEEE-ECCEEEEEEeC-----cCHHHHHHHHHh
Confidence 5789999999 89987777 79999998754 456777776653
No 119
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.29 E-value=2.3e-11 Score=91.56 Aligned_cols=88 Identities=13% Similarity=0.259 Sum_probs=71.8
Q ss_pred cCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHH
Q 024201 106 IGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSIS 185 (271)
Q Consensus 106 ~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~ 185 (271)
.++ ++||+|| ++||++|+...|.|.++++++++ ++.++.|+.|. +.+++
T Consensus 16 ~~~-~~lv~f~-a~wC~~C~~~~~~l~~~~~~~~~-~v~~~~vd~~~----------------------------~~~l~ 64 (112)
T 2voc_A 16 SEG-VVLADFW-APWCGPSKMIAPVLEELDQEMGD-KLKIVKIDVDE----------------------------NQETA 64 (112)
T ss_dssp SSS-EEEEEEE-CTTBGGGGGHHHHHHHHHHHHTT-TCEEEEEETTT----------------------------CCSHH
T ss_pred CCC-EEEEEEE-CCCCHHHHHHHHHHHHHHHHhCC-CcEEEEEECCC----------------------------CHHHH
Confidence 455 8999999 89999999999999999999875 69999998763 24588
Q ss_pred HHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHH
Q 024201 186 KSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 186 ~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l 235 (271)
+.|++. .+|+++++ ++|+++..+.+. ...+++.+.++.+
T Consensus 65 ~~~~v~------~~Pt~~~~-~~G~~~~~~~G~----~~~~~l~~~l~~~ 103 (112)
T 2voc_A 65 GKYGVM------SIPTLLVL-KDGEVVETSVGF----KPKEALQELVNKH 103 (112)
T ss_dssp HHTTCC------SBSEEEEE-ETTEEEEEEESC----CCHHHHHHHHHTT
T ss_pred HHcCCC------cccEEEEE-eCCEEEEEEeCC----CCHHHHHHHHHHH
Confidence 999998 89999999 899999886543 3466666666543
No 120
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.27 E-value=1.9e-11 Score=92.86 Aligned_cols=89 Identities=15% Similarity=0.133 Sum_probs=71.8
Q ss_pred ccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCCh
Q 024201 103 SDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITK 182 (271)
Q Consensus 103 sd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~ 182 (271)
.+.+++ ++||+|| ++||++|+...|.|.+++++++ ++.++.|..|. +.
T Consensus 27 ~~~~~k-~vlv~F~-a~wC~~C~~~~p~l~~l~~~~~--~v~~~~vd~d~----------------------------~~ 74 (116)
T 3qfa_C 27 DAAGDK-LVVVDFS-ATWCGPSKMIKPFFHSLSEKYS--NVIFLEVDVDD----------------------------CQ 74 (116)
T ss_dssp HHHTTS-CEEEEEE-CTTCHHHHHHHHHHHHHHTTCT--TSEEEEEETTT----------------------------TH
T ss_pred HhcCCC-EEEEEEE-CCCCHHHHHHHHHHHHHHHHCC--CCEEEEEECCC----------------------------CH
Confidence 344566 8999999 9999999999999999999886 48888888753 35
Q ss_pred HHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHH
Q 024201 183 SISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 183 ~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l 235 (271)
++++.|++. .+|+++++ ++|+++....+. +.+++.+.|+.+
T Consensus 75 ~l~~~~~v~------~~Pt~~~~-~~G~~~~~~~G~-----~~~~l~~~l~~~ 115 (116)
T 3qfa_C 75 DVASECEVK------SMPTFQFF-KKGQKVGEFSGA-----NKEKLEATINEL 115 (116)
T ss_dssp HHHHHTTCC------SSSEEEEE-SSSSEEEEEESC-----CHHHHHHHHHHH
T ss_pred HHHHHcCCc------cccEEEEE-eCCeEEEEEcCC-----CHHHHHHHHHHh
Confidence 788999999 89998888 899999886532 567777776653
No 121
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.26 E-value=6.6e-11 Score=88.61 Aligned_cols=87 Identities=21% Similarity=0.321 Sum_probs=68.4
Q ss_pred CCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHH
Q 024201 107 GKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISK 186 (271)
Q Consensus 107 gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~ 186 (271)
++ ++||+|| ++||++|+...|.|.+++++++..++.++.|..+. +.++++
T Consensus 21 ~~-~~~v~f~-a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~----------------------------~~~~~~ 70 (112)
T 3d6i_A 21 DK-LIVLYFH-TSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADE----------------------------NSEISE 70 (112)
T ss_dssp TC-CEEEEEE-CCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTT----------------------------CHHHHH
T ss_pred CC-EEEEEEE-CCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEeccc----------------------------CHHHHH
Confidence 55 8999999 99999999999999999998766679999998764 247889
Q ss_pred HhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHH
Q 024201 187 SYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 187 ~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l 235 (271)
.|++. .+|+++++ ++|+++....+. ..+++.+.|+.+
T Consensus 71 ~~~v~------~~Pt~~~~-~~G~~~~~~~G~-----~~~~l~~~l~~~ 107 (112)
T 3d6i_A 71 LFEIS------AVPYFIII-HKGTILKELSGA-----DPKEYVSLLEDC 107 (112)
T ss_dssp HTTCC------SSSEEEEE-ETTEEEEEECSC-----CHHHHHHHHHHH
T ss_pred HcCCC------cccEEEEE-ECCEEEEEecCC-----CHHHHHHHHHHH
Confidence 99998 89998888 799999886542 345566666654
No 122
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.25 E-value=3.3e-11 Score=95.19 Aligned_cols=112 Identities=10% Similarity=0.097 Sum_probs=84.5
Q ss_pred CCCCCCCeEEeeecCCCceeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHH
Q 024201 80 VGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAW 159 (271)
Q Consensus 80 ~G~~~Pdf~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~ 159 (271)
.|..+++..+..+.+. .+...-..++ ++||+|| ++||++|+...|.|.++++++++ ++.++.|..|.
T Consensus 31 ~~~~~~~~~v~~l~~~---~~~~~~~~~k-~vlv~F~-a~wC~~C~~~~p~l~~~~~~~~~-~~~~~~vd~~~------- 97 (148)
T 3p2a_A 31 CGHSLFDGEVINATAE---TLDKLLQDDL-PMVIDFW-APWCGPCRSFAPIFAETAAERAG-KVRFVKVNTEA------- 97 (148)
T ss_dssp TCCBTTCCCCEECCTT---THHHHTTCSS-CEEEEEE-CSSCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTT-------
T ss_pred cCCccccCCceecCHH---HHHHHHhcCC-cEEEEEE-CCCCHHHHHHHHHHHHHHHHcCC-ceEEEEEECcC-------
Confidence 4667777777655444 3332223455 8999999 99999999999999999999865 48888887752
Q ss_pred HHHhhhcCCCCCcccceEEcCChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHHH
Q 024201 160 VQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQ 236 (271)
Q Consensus 160 ~~~~~~~~~~~~~~f~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l~ 236 (271)
+.++++.|++. .+|+++++ ++|+++..+.+. ...+++.+.|+.+.
T Consensus 98 ---------------------~~~l~~~~~v~------~~Pt~~~~-~~G~~~~~~~G~----~~~~~l~~~l~~~l 142 (148)
T 3p2a_A 98 ---------------------EPALSTRFRIR------SIPTIMLY-RNGKMIDMLNGA----VPKAPFDNWLDEQL 142 (148)
T ss_dssp ---------------------CHHHHHHTTCC------SSSEEEEE-ETTEEEEEESSC----CCHHHHHHHHHHHH
T ss_pred ---------------------CHHHHHHCCCC------ccCEEEEE-ECCeEEEEEeCC----CCHHHHHHHHHHHh
Confidence 34788899998 89998888 699999876443 45778888887653
No 123
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.25 E-value=3.2e-11 Score=92.13 Aligned_cols=89 Identities=19% Similarity=0.257 Sum_probs=70.6
Q ss_pred cccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChH
Q 024201 104 DYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKS 183 (271)
Q Consensus 104 d~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~ 183 (271)
+..|+ ++||+|| ++||++|+...|.+.+++++++ ++.++.|..+. .+.+
T Consensus 34 ~~~~~-~~vv~f~-a~wC~~C~~~~~~l~~~~~~~~--~~~~~~vd~~~---------------------------~~~~ 82 (124)
T 1faa_A 34 AAGDK-PVVLDMF-TQWCGPCKAMAPKYEKLAEEYL--DVIFLKLDCNQ---------------------------ENKT 82 (124)
T ss_dssp HTTTS-CEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSS---------------------------TTHH
T ss_pred hcCCC-EEEEEEE-CCcCHhHHHHhHHHHHHHHHCC--CCEEEEEecCc---------------------------chHH
Confidence 33566 8999999 9999999999999999999886 68888887763 1357
Q ss_pred HHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHH
Q 024201 184 ISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 184 ~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l 235 (271)
+++.|++. .+|+ ++++++|+++....+. ..+++.+.|+.+
T Consensus 83 ~~~~~~v~------~~Pt-~~~~~~G~~~~~~~G~-----~~~~l~~~i~~~ 122 (124)
T 1faa_A 83 LAKELGIR------VVPT-FKILKENSVVGEVTGA-----KYDKLLEAIQAA 122 (124)
T ss_dssp HHHHHCCS------SSSE-EEEEETTEEEEEEESS-----CHHHHHHHHHHH
T ss_pred HHHHcCCC------eeeE-EEEEeCCcEEEEEcCC-----CHHHHHHHHHHh
Confidence 88999998 8898 5566899999886542 367777777654
No 124
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.24 E-value=5.8e-11 Score=89.00 Aligned_cols=85 Identities=13% Similarity=0.228 Sum_probs=69.1
Q ss_pred CCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHH
Q 024201 107 GKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISK 186 (271)
Q Consensus 107 gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~ 186 (271)
++ ++||+|| ++||++|+...|.|.+++++++ ++.++.|..|. +.++++
T Consensus 24 ~k-~vlv~f~-a~wC~~C~~~~p~l~~l~~~~~--~~~~~~vd~~~----------------------------~~~l~~ 71 (109)
T 3f3q_A 24 DK-LVVVDFY-ATWCGPCKMIAPMIEKFSEQYP--QADFYKLDVDE----------------------------LGDVAQ 71 (109)
T ss_dssp SS-CEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTT----------------------------CHHHHH
T ss_pred CC-EEEEEEE-CCcCHhHHHHHHHHHHHHHHCC--CCEEEEEECCC----------------------------CHHHHH
Confidence 55 8999999 9999999999999999999886 58888887642 357889
Q ss_pred HhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHH
Q 024201 187 SYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 187 ~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l 235 (271)
.|++. .+|++++++ +|+++....+. ..+++.+.|+.+
T Consensus 72 ~~~v~------~~Pt~~~~~-~G~~~~~~~G~-----~~~~l~~~i~~~ 108 (109)
T 3f3q_A 72 KNEVS------AMPTLLLFK-NGKEVAKVVGA-----NPAAIKQAIAAN 108 (109)
T ss_dssp HTTCC------SSSEEEEEE-TTEEEEEEESS-----CHHHHHHHHHHH
T ss_pred HcCCC------ccCEEEEEE-CCEEEEEEeCC-----CHHHHHHHHHhh
Confidence 99999 899999997 99999986543 346666666543
No 125
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.24 E-value=4.6e-11 Score=94.35 Aligned_cols=107 Identities=8% Similarity=0.030 Sum_probs=77.8
Q ss_pred CCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHH
Q 024201 107 GKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISK 186 (271)
Q Consensus 107 gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~ 186 (271)
++ ++||+|| ++||++|+...|.|.++++++++ ++.++.|.+|. +.++++
T Consensus 23 ~k-~vlv~F~-a~wC~~C~~~~p~l~~l~~~~~~-~v~~~~vd~d~----------------------------~~~~~~ 71 (142)
T 1qgv_A 23 DR-VVVIRFG-HDWDPTCMKMDEVLYSIAEKVKN-FAVIYLVDITE----------------------------VPDFNK 71 (142)
T ss_dssp SS-EEEEEEE-CTTSHHHHHHHHHHHHHHHHHTT-TEEEEEEETTT----------------------------CCTTTT
T ss_pred CC-EEEEEEE-CCCCHHHHHHHHHHHHHHHHhCC-CeEEEEEcccc----------------------------CHHHHH
Confidence 55 8999999 99999999999999999999864 58888888763 123577
Q ss_pred HhCCccCCCCccceEEEEEcCCCcEEEEEeccCC------CCCCHHHHHHHHHHHHHhhhCCCcccCCCCC
Q 024201 187 SYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLA------IGRSVDETLRTLQALQYVQENPDEVCPAGWK 251 (271)
Q Consensus 187 ~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~------~~~~~~e~l~~l~~l~~~~~~~~~~~p~~~~ 251 (271)
.|++. .+|+++++ ++|+++....+... ...+.+++++.|+.+.....+....|-.+|+
T Consensus 72 ~~~i~------~~Pt~~~~-~~G~~v~~~~g~~~~~~~~g~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~ 135 (142)
T 1qgv_A 72 MYELY------DPCTVMFF-FRNKHIMIDLGTGNNNKINWAMEDKQEMVDIIETVYRGARKGRGLVVSPKD 135 (142)
T ss_dssp SSCSC------SSCEEEEE-ETTEEEEEECC------CCSCCSCHHHHHHHHHHHHHHHTTTCSEEECCCC
T ss_pred HcCCC------CCCEEEEE-ECCcEEEEecCCCCcceeeeecCcHHHHHHHHHHHHHHHhcCCeEEeCCCC
Confidence 89998 89999998 58998886544211 1124788888888776554443344444444
No 126
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.24 E-value=1.4e-10 Score=86.86 Aligned_cols=86 Identities=19% Similarity=0.253 Sum_probs=71.3
Q ss_pred cEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHHHh
Q 024201 109 KYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSY 188 (271)
Q Consensus 109 k~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~y 188 (271)
+++||+|| ++||+.|+...|.|.++.+++++ ++.++.|..|. +.++++.|
T Consensus 26 ~~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~-~v~~~~v~~~~----------------------------~~~~~~~~ 75 (115)
T 1thx_A 26 QPVLVYFW-ASWCGPCQLMSPLINLAANTYSD-RLKVVKLEIDP----------------------------NPTTVKKY 75 (115)
T ss_dssp SCEEEEEE-CTTCTTHHHHHHHHHHHHHHTTT-TCEEEEEESTT----------------------------CHHHHHHT
T ss_pred ceEEEEEE-CCCCHHHHHhHHHHHHHHHHhCC-cEEEEEEEcCC----------------------------CHHHHHHc
Confidence 48999999 89999999999999999999875 38999888763 24688899
Q ss_pred CCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHH
Q 024201 189 GVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 189 gv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l 235 (271)
++. .+|+++++ ++|+++....+. ...+++.+.|+.+
T Consensus 76 ~v~------~~Pt~~~~-~~G~~~~~~~g~----~~~~~l~~~l~~~ 111 (115)
T 1thx_A 76 KVE------GVPALRLV-KGEQILDSTEGV----ISKDKLLSFLDTH 111 (115)
T ss_dssp TCC------SSSEEEEE-ETTEEEEEEESC----CCHHHHHHHHHHH
T ss_pred CCC------ceeEEEEE-cCCEEEEEecCC----CCHHHHHHHHHHH
Confidence 998 89999999 899999876543 3567777777765
No 127
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.23 E-value=7.7e-11 Score=86.94 Aligned_cols=87 Identities=14% Similarity=0.253 Sum_probs=70.4
Q ss_pred cCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHH
Q 024201 106 IGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSIS 185 (271)
Q Consensus 106 ~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~ 185 (271)
.++ ++||+|| ++||+.|+...|.+.+++++++++ +.++.|..|. +.+++
T Consensus 18 ~~~-~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~~----------------------------~~~~~ 66 (106)
T 3die_A 18 ESG-VQLVDFW-ATACGPCKMIAPVLEELAADYEGK-ADILKLDVDE----------------------------NPSTA 66 (106)
T ss_dssp CSS-EEEEEEE-CSBCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTT----------------------------CHHHH
T ss_pred cCC-cEEEEEE-CCCCHHHHHHhHHHHHHHHHhcCC-cEEEEEECCc----------------------------CHHHH
Confidence 455 8999999 999999999999999999998753 8888887753 35688
Q ss_pred HHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHH
Q 024201 186 KSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQA 234 (271)
Q Consensus 186 ~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~ 234 (271)
+.|++. .+|++++++ +|+++....+. ...+++.+.|+.
T Consensus 67 ~~~~v~------~~Pt~~~~~-~G~~~~~~~g~----~~~~~l~~~l~~ 104 (106)
T 3die_A 67 AKYEVM------SIPTLIVFK-DGQPVDKVVGF----QPKENLAEVLDK 104 (106)
T ss_dssp HHTTCC------SBSEEEEEE-TTEEEEEEESC----CCHHHHHHHHHT
T ss_pred HhCCCc------ccCEEEEEe-CCeEEEEEeCC----CCHHHHHHHHHH
Confidence 899999 899999995 99999886543 356777776654
No 128
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.23 E-value=8.1e-11 Score=88.01 Aligned_cols=86 Identities=17% Similarity=0.362 Sum_probs=69.3
Q ss_pred cEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHHHh
Q 024201 109 KYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSY 188 (271)
Q Consensus 109 k~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~y 188 (271)
+++||+|| ++||++|+...|.|.++++++++ ++.++.|+.|. +.++++.|
T Consensus 24 ~~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~----------------------------~~~~~~~~ 73 (112)
T 1t00_A 24 KPVLVDFW-AAWCGPCRQIAPSLEAIAAEYGD-KIEIVKLNIDE----------------------------NPGTAAKY 73 (112)
T ss_dssp SCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTT----------------------------CHHHHHHT
T ss_pred CeEEEEEE-CCCCHhHHhcCHHHHHHHHHhcC-CeEEEEEEcCC----------------------------CHHHHHhC
Confidence 48999999 89999999999999999999865 48888888654 34688899
Q ss_pred CCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHH
Q 024201 189 GVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 189 gv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l 235 (271)
++. .+|+++++ ++|+++....+. ...+++.+.|+.+
T Consensus 74 ~v~------~~Pt~~~~-~~G~~~~~~~G~----~~~~~l~~~l~~~ 109 (112)
T 1t00_A 74 GVM------SIPTLNVY-QGGEVAKTIVGA----KPKAAIVRDLEDF 109 (112)
T ss_dssp TCC------SSSEEEEE-ETTEEEEEEESC----CCHHHHHHHTHHH
T ss_pred CCC------cccEEEEE-eCCEEEEEEeCC----CCHHHHHHHHHHH
Confidence 998 88987776 799999876543 3466777777654
No 129
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.23 E-value=2.1e-11 Score=95.07 Aligned_cols=94 Identities=14% Similarity=0.191 Sum_probs=75.2
Q ss_pred eEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEE
Q 024201 99 NVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIA 178 (271)
Q Consensus 99 ~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~ 178 (271)
.+.+.+..|+ ++||+|| ++||++|+...|.|.++++++. ++.++.|++|.
T Consensus 38 ~~~~~~~~~k-~vvv~f~-a~wC~~C~~~~~~l~~l~~~~~--~v~~~~v~~~~-------------------------- 87 (139)
T 3d22_A 38 KLSEASRDGK-IVLANFS-ARWCGPSRQIAPYYIELSENYP--SLMFLVIDVDE-------------------------- 87 (139)
T ss_dssp HHHHHHHHTC-CEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTT--------------------------
T ss_pred HHHHHhhcCC-EEEEEEE-CCCCHHHHHHHHHHHHHHHHCC--CCEEEEEeCcc--------------------------
Confidence 3444556687 8999999 8999999999999999999884 79999998763
Q ss_pred cCChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHHH
Q 024201 179 DITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQ 236 (271)
Q Consensus 179 D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l~ 236 (271)
+.++++.||+. .+|+++++ ++|+++....+. ..+++.+.|+.+.
T Consensus 88 --~~~~~~~~~v~------~~Pt~~~~-~~G~~~~~~~G~-----~~~~l~~~l~~~~ 131 (139)
T 3d22_A 88 --LSDFSASWEIK------ATPTFFFL-RDGQQVDKLVGA-----NKPELHKKITAIL 131 (139)
T ss_dssp --SHHHHHHTTCC------EESEEEEE-ETTEEEEEEESC-----CHHHHHHHHHHHH
T ss_pred --cHHHHHHcCCC------cccEEEEE-cCCeEEEEEeCC-----CHHHHHHHHHHHh
Confidence 35688999998 89998888 899999886543 4567777776553
No 130
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.22 E-value=7.3e-11 Score=90.75 Aligned_cols=86 Identities=23% Similarity=0.316 Sum_probs=69.6
Q ss_pred cCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHH
Q 024201 106 IGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSIS 185 (271)
Q Consensus 106 ~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~ 185 (271)
.++ ++||+|| ++||+.|+...|.|.++++++. ++.++.|..|. +.+++
T Consensus 37 ~~k-~vvv~f~-a~wC~~C~~~~~~l~~l~~~~~--~v~~~~vd~d~----------------------------~~~l~ 84 (124)
T 1xfl_A 37 SKT-LVVVDFT-ASWCGPCRFIAPFFADLAKKLP--NVLFLKVDTDE----------------------------LKSVA 84 (124)
T ss_dssp TTC-EEEEEEE-CTTCHHHHHHHHHHHHHHHHCS--SEEEEEEETTT----------------------------SHHHH
T ss_pred cCC-EEEEEEE-CCCCHHHHHHHHHHHHHHHHCC--CcEEEEEECcc----------------------------CHHHH
Confidence 576 8999999 8999999999999999999886 78888887742 35788
Q ss_pred HHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHH
Q 024201 186 KSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 186 ~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l 235 (271)
+.|++. .+|+++++ ++|+++....+ .+.+++.+.|+.+
T Consensus 85 ~~~~v~------~~Pt~~~~-~~G~~~~~~~G-----~~~~~l~~~l~~~ 122 (124)
T 1xfl_A 85 SDWAIQ------AMPTFMFL-KEGKILDKVVG-----AKKDELQSTIAKH 122 (124)
T ss_dssp HHTTCC------SSSEEEEE-ETTEEEEEEES-----CCHHHHHHHHHHH
T ss_pred HHcCCC------ccCEEEEE-ECCEEEEEEeC-----CCHHHHHHHHHHh
Confidence 999998 89987766 89999988654 2466777776654
No 131
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.22 E-value=1e-10 Score=89.02 Aligned_cols=87 Identities=15% Similarity=0.177 Sum_probs=71.0
Q ss_pred CCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHH
Q 024201 107 GKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISK 186 (271)
Q Consensus 107 gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~ 186 (271)
++ ++||+|| ++||+.|+...+.|.++++++.+ ++.++.|.+|. +.++++
T Consensus 31 ~k-~vlv~f~-a~~C~~C~~~~~~l~~~~~~~~~-~v~~~~vd~d~----------------------------~~~l~~ 79 (119)
T 1w4v_A 31 ET-PVVVDFH-AQWCGPCKILGPRLEKMVAKQHG-KVVMAKVDIDD----------------------------HTDLAI 79 (119)
T ss_dssp SS-CEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-SSEEEEEETTT----------------------------THHHHH
T ss_pred CC-cEEEEEE-CCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEeCCC----------------------------CHHHHH
Confidence 45 8999999 99999999999999999998865 58898888753 346889
Q ss_pred HhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHH
Q 024201 187 SYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 187 ~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l 235 (271)
.|++. .+|+++++ ++|+++....+. .+.+++.+.|+.+
T Consensus 80 ~~~v~------~~Pt~~~~-~~G~~~~~~~G~----~~~~~l~~~l~~~ 117 (119)
T 1w4v_A 80 EYEVS------AVPTVLAM-KNGDVVDKFVGI----KDEDQLEAFLKKL 117 (119)
T ss_dssp HTTCC------SSSEEEEE-ETTEEEEEEESC----CCHHHHHHHHHHH
T ss_pred HcCCC------cccEEEEE-eCCcEEEEEcCC----CCHHHHHHHHHHH
Confidence 99999 89999999 899999876542 3567777777654
No 132
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.22 E-value=1.4e-10 Score=85.92 Aligned_cols=86 Identities=14% Similarity=0.288 Sum_probs=68.9
Q ss_pred cEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHHHh
Q 024201 109 KYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSY 188 (271)
Q Consensus 109 k~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~y 188 (271)
+++||+|| ++||++|+...|.|.++++++++ ++.++.|+.|. +.++++.|
T Consensus 20 ~~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~----------------------------~~~~~~~~ 69 (107)
T 1dby_A 20 VPVLVDFW-APWCGPCRIIAPVVDEIAGEYKD-KLKCVKLNTDE----------------------------SPNVASEY 69 (107)
T ss_dssp SCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTT----------------------------CHHHHHHH
T ss_pred CcEEEEEE-CCCCHhHHHHHHHHHHHHHHhCC-ceEEEEEECCC----------------------------CHHHHHHC
Confidence 48999999 89999999999999999998875 48888887653 34788899
Q ss_pred CCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHH
Q 024201 189 GVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 189 gv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l 235 (271)
|+. .+|+++++ ++|+++....+. ...+++.+.|+.+
T Consensus 70 ~v~------~~Pt~~~~-~~G~~~~~~~G~----~~~~~l~~~l~~~ 105 (107)
T 1dby_A 70 GIR------SIPTIMVF-KGGKKCETIIGA----VPKATIVQTVEKY 105 (107)
T ss_dssp TCC------SSCEEEEE-SSSSEEEEEESC----CCHHHHHHHHHHH
T ss_pred CCC------cCCEEEEE-eCCEEEEEEeCC----CCHHHHHHHHHHH
Confidence 998 89997777 799999886543 3456676666654
No 133
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.22 E-value=2.1e-11 Score=95.04 Aligned_cols=93 Identities=11% Similarity=0.179 Sum_probs=70.6
Q ss_pred eEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEE
Q 024201 99 NVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIA 178 (271)
Q Consensus 99 ~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~ 178 (271)
.-.+++.+|+ ++||+|| ++||++|+...|.|.++.+++ ++.++.|..|.
T Consensus 32 ~~~l~~~~~k-~vvv~F~-a~wC~~C~~~~p~l~~l~~~~---~v~~~~vd~~~-------------------------- 80 (133)
T 3cxg_A 32 NQVFSSTQNS-SIVIKFG-AVWCKPCNKIKEYFKNQLNYY---YVTLVDIDVDI-------------------------- 80 (133)
T ss_dssp HHHHTC-CCS-EEEEEEE-CTTCHHHHHTHHHHHGGGGTE---ECEEEEEETTT--------------------------
T ss_pred HHHHHhcCCC-EEEEEEE-CCCCHHHHHHHHHHHHHHHhc---CEEEEEEeccc--------------------------
Confidence 3445666777 8999999 999999999999998877665 57777776542
Q ss_pred cCChHHHHHhCCccCCCCccceEEEEE-cCCCc--EEEEEeccCCCCCCHHHHHHHHHHH
Q 024201 179 DITKSISKSYGVLIPDQGIALRGLFII-DKEGV--IQHSTINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 179 D~~~~~~~~ygv~~~~~g~~~P~~~lI-D~~G~--V~~~~~~~~~~~~~~~e~l~~l~~l 235 (271)
+.++++.|++. .+|+++++ |+||+ ++....+. ..+++.+.|+.+
T Consensus 81 --~~~l~~~~~v~------~~Pt~~~~~~~~g~g~~~~~~~G~-----~~~~l~~~l~~~ 127 (133)
T 3cxg_A 81 --HPKLNDQHNIK------ALPTFEFYFNLNNEWVLVHTVEGA-----NQNDIEKAFQKY 127 (133)
T ss_dssp --CHHHHHHTTCC------SSSEEEEEEEETTEEEEEEEEESC-----CHHHHHHHHHHH
T ss_pred --hHHHHHhcCCC------CCCEEEEEEecCCCeEEEEEEcCC-----CHHHHHHHHHHH
Confidence 35788999998 89999998 55666 87776432 467777777765
No 134
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.21 E-value=5.8e-11 Score=87.69 Aligned_cols=85 Identities=12% Similarity=0.236 Sum_probs=68.2
Q ss_pred cEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHHHh
Q 024201 109 KYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSY 188 (271)
Q Consensus 109 k~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~y 188 (271)
+++||+|| ++||++|+...|.+.++.+++++ ++.++.|+.|. +.++++.|
T Consensus 18 ~~~~v~f~-~~~C~~C~~~~~~l~~~~~~~~~-~v~~~~v~~~~----------------------------~~~~~~~~ 67 (105)
T 1nsw_A 18 GPVLVDFW-AAWCGPCRMMAPVLEEFAEAHAD-KVTVAKLNVDE----------------------------NPETTSQF 67 (105)
T ss_dssp SCEEEEEE-CTTCHHHHHHHHHHHHHHHHSTT-TCEEEEEETTT----------------------------CHHHHHHT
T ss_pred CcEEEEEE-CCCCHHHHHHHHHHHHHHHHhcC-CcEEEEEECcC----------------------------CHHHHHHc
Confidence 48999999 89999999999999999998875 48888887653 34688899
Q ss_pred CCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHH
Q 024201 189 GVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQA 234 (271)
Q Consensus 189 gv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~ 234 (271)
|+. .+|+++++ ++|+++....+. ...+++.+.|+.
T Consensus 68 ~v~------~~Pt~~~~-~~G~~~~~~~G~----~~~~~l~~~l~~ 102 (105)
T 1nsw_A 68 GIM------SIPTLILF-KGGRPVKQLIGY----QPKEQLEAQLAD 102 (105)
T ss_dssp TCC------SSSEEEEE-ETTEEEEEEESC----CCHHHHHHHTTT
T ss_pred CCc------cccEEEEE-eCCeEEEEEecC----CCHHHHHHHHHH
Confidence 998 89999999 899999876543 345566665543
No 135
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.21 E-value=1.9e-10 Score=88.52 Aligned_cols=89 Identities=15% Similarity=0.229 Sum_probs=72.1
Q ss_pred cEEEEEEecCCCCCChHHHHHHHHHHHHHHHh---cCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHH
Q 024201 109 KYVILFFYPLDFTFVCPTEITAFSDRYTEFEK---LNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSIS 185 (271)
Q Consensus 109 k~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~---~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~ 185 (271)
+++||+|| ++||++|+...|.+.++++++++ .++.++.|..+. +.+++
T Consensus 26 ~~~lv~f~-a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~----------------------------~~~l~ 76 (133)
T 1x5d_A 26 DVWMVEFY-APWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATV----------------------------NQVLA 76 (133)
T ss_dssp SEEEEEEE-CTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTT----------------------------CCHHH
T ss_pred CeEEEEEE-CCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCC----------------------------CHHHH
Confidence 48999999 99999999999999999999873 458888887653 25789
Q ss_pred HHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHHHH
Q 024201 186 KSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQY 237 (271)
Q Consensus 186 ~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l~~ 237 (271)
+.|++. .+|+++++++ |+++..+.+ ....+++.+.|+.+..
T Consensus 77 ~~~~v~------~~Pt~~~~~~-g~~~~~~~G----~~~~~~l~~~l~~~~~ 117 (133)
T 1x5d_A 77 SRYGIR------GFPTIKIFQK-GESPVDYDG----GRTRSDIVSRALDLFS 117 (133)
T ss_dssp HHHTCC------SSSEEEEEET-TEEEEEECS----CCSHHHHHHHHHHHHH
T ss_pred HhCCCC------eeCeEEEEeC-CCceEEecC----CCCHHHHHHHHHHHhh
Confidence 999999 8999999986 887777543 2467888888876643
No 136
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.21 E-value=1.6e-10 Score=85.31 Aligned_cols=87 Identities=14% Similarity=0.264 Sum_probs=70.8
Q ss_pred CcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHHH
Q 024201 108 KKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKS 187 (271)
Q Consensus 108 kk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ 187 (271)
++++||+|| ++||+.|+...+.+.++.+++.+ ++.++.|..+. +.++++.
T Consensus 20 ~~~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~----------------------------~~~~~~~ 69 (107)
T 2i4a_A 20 SGLVLVDFW-AEWCGPCKMIGPALGEIGKEFAG-KVTVAKVNIDD----------------------------NPETPNA 69 (107)
T ss_dssp SSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHTT-SEEEEEEETTT----------------------------CCHHHHH
T ss_pred CCEEEEEEE-CCCChhHHHHhHHHHHHHHHhCC-cEEEEEEECCC----------------------------CHHHHHh
Confidence 348999999 89999999999999999999875 68888887653 2468899
Q ss_pred hCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHH
Q 024201 188 YGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 188 ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l 235 (271)
|++. .+|+++++ ++|+++....+. .+.+++.+.|+.+
T Consensus 70 ~~v~------~~Pt~~~~-~~G~~~~~~~G~----~~~~~l~~~l~~~ 106 (107)
T 2i4a_A 70 YQVR------SIPTLMLV-RDGKVIDKKVGA----LPKSQLKAWVESA 106 (107)
T ss_dssp TTCC------SSSEEEEE-ETTEEEEEEESC----CCHHHHHHHHHHT
T ss_pred cCCC------ccCEEEEE-eCCEEEEEecCC----CCHHHHHHHHHhc
Confidence 9998 89999999 899999876543 3567777776643
No 137
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.20 E-value=1.6e-10 Score=85.68 Aligned_cols=87 Identities=14% Similarity=0.285 Sum_probs=70.1
Q ss_pred CcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHHH
Q 024201 108 KKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKS 187 (271)
Q Consensus 108 kk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ 187 (271)
++++||+|| ++||+.|+...|.|.++++++++ ++.++.|..+. +.++++.
T Consensus 20 ~~~~~v~f~-~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~----------------------------~~~~~~~ 69 (108)
T 2trx_A 20 DGAILVDFW-AEWCGPCKMIAPILDEIADEYQG-KLTVAKLNIDQ----------------------------NPGTAPK 69 (108)
T ss_dssp SSEEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TEEEEEEETTT----------------------------CTTHHHH
T ss_pred CCeEEEEEE-CCCCHhHHHHHHHHHHHHHHhCC-CcEEEEEECCC----------------------------CHHHHHH
Confidence 348999999 89999999999999999998875 48888887653 2357889
Q ss_pred hCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHH
Q 024201 188 YGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 188 ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l 235 (271)
||+. .+|+++++ ++|+++....+. .+.+++.+.|+.+
T Consensus 70 ~~v~------~~Pt~~~~-~~G~~~~~~~G~----~~~~~l~~~l~~~ 106 (108)
T 2trx_A 70 YGIR------GIPTLLLF-KNGEVAATKVGA----LSKGQLKEFLDAN 106 (108)
T ss_dssp TTCC------SSSEEEEE-ETTEEEEEEESC----CCHHHHHHHHHHH
T ss_pred cCCc------ccCEEEEE-eCCEEEEEEecC----CCHHHHHHHHHHh
Confidence 9998 89999999 899999876543 3567777777654
No 138
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.20 E-value=1.7e-10 Score=85.36 Aligned_cols=88 Identities=15% Similarity=0.229 Sum_probs=71.7
Q ss_pred cCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHH
Q 024201 106 IGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSIS 185 (271)
Q Consensus 106 ~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~ 185 (271)
.++ ++||+|| ++||+.|....|.+.++.+++++ .+.++.|..| .+.+++
T Consensus 20 ~~~-~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~----------------------------~~~~~~ 68 (109)
T 3tco_A 20 NNK-LVLVDCW-AEWCAPCHLYEPIYKKVAEKYKG-KAVFGRLNVD----------------------------ENQKIA 68 (109)
T ss_dssp HSS-EEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TSEEEEEETT----------------------------TCHHHH
T ss_pred cCC-eEEEEEE-CCCCHHHHhhhHHHHHHHHHhCC-CceEEEEccc----------------------------cCHHHH
Confidence 355 8999999 99999999999999999999875 5888877764 245788
Q ss_pred HHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHH
Q 024201 186 KSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 186 ~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l 235 (271)
+.|++. .+|+++++ ++|+++....+. .+.+++.+.|+.+
T Consensus 69 ~~~~i~------~~Pt~~~~-~~g~~~~~~~g~----~~~~~l~~~l~~~ 107 (109)
T 3tco_A 69 DKYSVL------NIPTTLIF-VNGQLVDSLVGA----VDEDTLESTVNKY 107 (109)
T ss_dssp HHTTCC------SSSEEEEE-ETTEEEEEEESC----CCHHHHHHHHHHH
T ss_pred HhcCcc------cCCEEEEE-cCCcEEEeeecc----CCHHHHHHHHHHH
Confidence 899998 89999999 899999986543 3567777777654
No 139
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.20 E-value=5e-11 Score=90.68 Aligned_cols=109 Identities=18% Similarity=0.280 Sum_probs=76.3
Q ss_pred CCCCCCCeEEeeecCCCceeEecccc--cCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHH
Q 024201 80 VGNTAPDFAAEAVFDQEFINVKLSDY--IGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHL 157 (271)
Q Consensus 80 ~G~~~Pdf~l~~~~~~~g~~v~Lsd~--~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~ 157 (271)
.|...+.+.+.+..+- .-.+.+. .++ ++||+|| ++||++|+...|.|.++.++++ ++.++.|..|.
T Consensus 8 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~--~~~~~~vd~~~----- 75 (122)
T 2vlu_A 8 AAVAAEVISVHSLEQW---TMQIEEANTAKK-LVVIDFT-ASWCGPCRIMAPVFADLAKKFP--NAVFLKVDVDE----- 75 (122)
T ss_dssp ----CCCEEECSHHHH---HHHHHHHHHTTC-CEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTT-----
T ss_pred cCCCCcceeccCHHHH---HHHHHHhhccCC-EEEEEEE-CCCCHHHHHHHHHHHHHHHHCC--CcEEEEEECCC-----
Confidence 4666677776522111 1122221 455 8999999 9999999999999999999886 48888887753
Q ss_pred HHHHHhhhcCCCCCcccceEEcCChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHH
Q 024201 158 AWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 158 ~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l 235 (271)
+.++++.|++. .+|+++++ ++|+++..+.+. . .+++.+.|+.+
T Consensus 76 -----------------------~~~~~~~~~v~------~~Pt~~~~-~~G~~~~~~~G~----~-~~~l~~~l~~~ 118 (122)
T 2vlu_A 76 -----------------------LKPIAEQFSVE------AMPTFLFM-KEGDVKDRVVGA----I-KEELTAKVGLH 118 (122)
T ss_dssp -----------------------CHHHHHHTTCC------SSSEEEEE-ETTEEEEEEESS----C-HHHHHHHHHHH
T ss_pred -----------------------CHHHHHHcCCC------cccEEEEE-eCCEEEEEEeCc----C-HHHHHHHHHHH
Confidence 35688899998 89987666 899999876543 2 66777777655
No 140
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.20 E-value=1.3e-11 Score=100.57 Aligned_cols=80 Identities=14% Similarity=0.082 Sum_probs=61.1
Q ss_pred ecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcC
Q 024201 101 KLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADI 180 (271)
Q Consensus 101 ~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~ 180 (271)
.+++++|+ ++||+|| ++|||+|+.++|.|.++++++. ++.++.|+.|.. .+..+.+ .
T Consensus 48 ~l~~~~~k-~vvv~F~-A~WC~pC~~~~P~l~~l~~~~~--~v~~~~v~~d~~---~~~~~~~-------~--------- 104 (167)
T 1z6n_A 48 RLQRIERR-YRLLVAG-EMWCPDCQINLAALDFAQRLQP--NIELAIISKGRA---EDDLRQR-------L--------- 104 (167)
T ss_dssp HHHTCCSC-EEEEEEC-CTTCHHHHHHHHHHHHHHHHCT--TEEEEEECHHHH---HHHTTTT-------T---------
T ss_pred HHHHhCCC-EEEEEEE-CCCChhHHHHHHHHHHHHHHCC--CcEEEEEECCCC---HHHHHHH-------H---------
Confidence 46677887 8999999 9999999999999999998875 688888876531 1222221 0
Q ss_pred ChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEE
Q 024201 181 TKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHST 215 (271)
Q Consensus 181 ~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~ 215 (271)
..++. .+|+++++|++|+++.++
T Consensus 105 ------~~~v~------~iPt~i~~~~~G~~~~~~ 127 (167)
T 1z6n_A 105 ------ALERI------AIPLVLVLDEEFNLLGRF 127 (167)
T ss_dssp ------TCSSC------CSSEEEEECTTCCEEEEE
T ss_pred ------HcCCC------CcCeEEEECCCCCEEEEE
Confidence 01355 799999999999998875
No 141
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.18 E-value=1.4e-10 Score=88.51 Aligned_cols=88 Identities=14% Similarity=0.169 Sum_probs=71.6
Q ss_pred cCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHH
Q 024201 106 IGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSIS 185 (271)
Q Consensus 106 ~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~ 185 (271)
.++ ++||+|| ++||+.|....+.|.++.++++++++.++.|+.|. +.+++
T Consensus 32 ~~k-~vvv~f~-a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~----------------------------~~~~~ 81 (121)
T 2j23_A 32 GDK-VVVIDFW-ATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDE----------------------------QSQIA 81 (121)
T ss_dssp SSS-CEEEEEE-CTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTT----------------------------CHHHH
T ss_pred CCC-EEEEEEE-CCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcC----------------------------CHHHH
Confidence 344 8999999 89999999999999999999887779999888763 35688
Q ss_pred HHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHH
Q 024201 186 KSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 186 ~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l 235 (271)
+.|++. .+|+++++ ++|+++....+. +.+++.+.|+.+
T Consensus 82 ~~~~v~------~~Pt~~~~-~~G~~~~~~~G~-----~~~~l~~~l~~~ 119 (121)
T 2j23_A 82 QEVGIR------AMPTFVFF-KNGQKIDTVVGA-----DPSKLQAAITQH 119 (121)
T ss_dssp HHHTCC------SSSEEEEE-ETTEEEEEEESS-----CHHHHHHHHHHH
T ss_pred HHcCCC------cccEEEEE-ECCeEEeeEcCC-----CHHHHHHHHHHh
Confidence 899998 89998888 599999886432 467777777654
No 142
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.18 E-value=1.9e-10 Score=85.89 Aligned_cols=86 Identities=16% Similarity=0.264 Sum_probs=69.6
Q ss_pred CCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHH
Q 024201 107 GKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISK 186 (271)
Q Consensus 107 gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~ 186 (271)
++ ++||+|| ++||++|+...|.|.++.+++.+ ++.++.|..|. +.++++
T Consensus 24 ~~-~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~~----------------------------~~~~~~ 72 (112)
T 1ep7_A 24 HK-PIVVDFT-ATWCGPCKMIAPLFETLSNDYAG-KVIFLKVDVDA----------------------------VAAVAE 72 (112)
T ss_dssp TC-CEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTT----------------------------THHHHH
T ss_pred CC-eEEEEEE-CCCCHHHHHHHHHHHHHHHHcCC-CeEEEEEECCc----------------------------hHHHHH
Confidence 66 8999999 89999999999999999999875 68999887753 357888
Q ss_pred HhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHH
Q 024201 187 SYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 187 ~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l 235 (271)
.|++. .+|+++++ ++|+++....+. +.+++.+.|+.+
T Consensus 73 ~~~v~------~~Pt~~~~-~~G~~~~~~~G~-----~~~~l~~~l~~~ 109 (112)
T 1ep7_A 73 AAGIT------AMPTFHVY-KDGVKADDLVGA-----SQDKLKALVAKH 109 (112)
T ss_dssp HHTCC------BSSEEEEE-ETTEEEEEEESC-----CHHHHHHHHHHH
T ss_pred HcCCC------cccEEEEE-ECCeEEEEEcCC-----CHHHHHHHHHHH
Confidence 99998 88986665 899999876432 466777777655
No 143
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.18 E-value=2.2e-10 Score=83.77 Aligned_cols=87 Identities=15% Similarity=0.287 Sum_probs=70.6
Q ss_pred cCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHH
Q 024201 106 IGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSIS 185 (271)
Q Consensus 106 ~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~ 185 (271)
.++ ++||+|| ++|||.|+...+.+.++.+++++ +.++.|+.|. +.+++
T Consensus 15 ~~~-~~~v~f~-~~~C~~C~~~~~~~~~~~~~~~~--~~~~~v~~~~----------------------------~~~~~ 62 (104)
T 2e0q_A 15 SHE-IAVVDFW-AEWCAPCLILAPIIEELAEDYPQ--VGFGKLNSDE----------------------------NPDIA 62 (104)
T ss_dssp HSS-EEEEEEE-CTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTT----------------------------CHHHH
T ss_pred cCC-cEEEEEE-CCCChhHHHHhHHHHHHHHHcCC--ceEEEEECCC----------------------------CHHHH
Confidence 455 8999999 89999999999999999998864 8888888753 34688
Q ss_pred HHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHH
Q 024201 186 KSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 186 ~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l 235 (271)
+.|++. ..|+++++ ++|+++....+. ...+++.+.|+.+
T Consensus 63 ~~~~v~------~~Pt~~~~-~~g~~~~~~~g~----~~~~~l~~~l~~~ 101 (104)
T 2e0q_A 63 ARYGVM------SLPTVIFF-KDGEPVDEIIGA----VPREEIEIRIKNL 101 (104)
T ss_dssp HHTTCC------SSCEEEEE-ETTEEEEEEESC----CCHHHHHHHHHHH
T ss_pred HhCCcc------ccCEEEEE-ECCeEhhhccCC----CCHHHHHHHHHHH
Confidence 899998 89999999 899999876543 3467777777654
No 144
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.18 E-value=9e-11 Score=90.78 Aligned_cols=87 Identities=13% Similarity=0.243 Sum_probs=70.2
Q ss_pred CcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHHH
Q 024201 108 KKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKS 187 (271)
Q Consensus 108 kk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ 187 (271)
++++||+|| ++||+.|+...|.|.++++++++ ++.++.|++|. +.++++.
T Consensus 40 ~k~vlv~F~-a~wC~~C~~~~p~l~~l~~~~~~-~v~~~~vd~~~----------------------------~~~l~~~ 89 (128)
T 2o8v_B 40 DGAILVDFW-AEWCGPAKMIAPILDEIADEYQG-KLTVAKLNIDQ----------------------------NPGTAPK 89 (128)
T ss_dssp SSEEEEEEE-CSSCHHHHHTHHHHHHHHHHTTT-TEEEEEEETTT----------------------------CCTTSGG
T ss_pred CCEEEEEEE-CCCCHHHHHHhHHHHHHHHHhcC-CeEEEEEECCC----------------------------CHHHHHH
Confidence 348999999 99999999999999999999875 48888888764 1246678
Q ss_pred hCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHH
Q 024201 188 YGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 188 ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l 235 (271)
|++. .+|+++++ ++|+++....+. ...+++.+.|+.+
T Consensus 90 ~~v~------~~Pt~~~~-~~G~~~~~~~G~----~~~~~l~~~l~~~ 126 (128)
T 2o8v_B 90 YGIR------GIPTLLLF-KNGEVAATKVGA----LSKGQLKEFLDAN 126 (128)
T ss_dssp GTCC------SSSEEEEE-ETTEEEEEEESC----CCHHHHHHHHHHH
T ss_pred cCCC------ccCEEEEE-eCCEEEEEEcCC----CCHHHHHHHHHHh
Confidence 9998 89999999 899999876543 3567777777654
No 145
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.18 E-value=7.8e-11 Score=103.05 Aligned_cols=75 Identities=11% Similarity=0.274 Sum_probs=64.1
Q ss_pred cCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHH
Q 024201 106 IGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSIS 185 (271)
Q Consensus 106 ~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~ 185 (271)
+|+ ++||+|| ++||++|+...|.+.++.+++++ ++.++.|.+|. +.+++
T Consensus 25 ~~~-~v~v~f~-a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~----------------------------~~~~~ 73 (287)
T 3qou_A 25 MTT-PVLFYFW-SERSQHCLQLTPILESLAAQYNG-QFILAKLDCDA----------------------------EQMIA 73 (287)
T ss_dssp TTS-CEEEEEE-CTTCTTTTTTHHHHHHHHHHHTS-SSEEEEEETTT----------------------------CHHHH
T ss_pred CCC-eEEEEEE-CCCChHHHHHHHHHHHHHHHcCC-CeEEEEEeCcc----------------------------CHHHH
Confidence 466 8999999 99999999999999999999974 48888887763 24788
Q ss_pred HHhCCccCCCCccceEEEEEcCCCcEEEEEecc
Q 024201 186 KSYGVLIPDQGIALRGLFIIDKEGVIQHSTINN 218 (271)
Q Consensus 186 ~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~ 218 (271)
+.|+|. .+|+++++ ++|+++..+.+.
T Consensus 74 ~~~~v~------~~Pt~~~~-~~G~~~~~~~g~ 99 (287)
T 3qou_A 74 AQFGLR------AIPTVYLF-QNGQPVDGFQGP 99 (287)
T ss_dssp HTTTCC------SSSEEEEE-ETTEEEEEEESC
T ss_pred HHcCCC------CCCeEEEE-ECCEEEEEeeCC
Confidence 999999 89999999 799999887653
No 146
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.16 E-value=8.6e-11 Score=87.21 Aligned_cols=85 Identities=16% Similarity=0.230 Sum_probs=61.7
Q ss_pred cEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHHHh
Q 024201 109 KYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSY 188 (271)
Q Consensus 109 k~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~y 188 (271)
+++||+|| ++||++|+...|.+.++++++. ++.++.|..|. +.++++.|
T Consensus 19 ~~vlv~f~-a~wC~~C~~~~p~~~~~~~~~~--~~~~~~vd~~~----------------------------~~~l~~~~ 67 (105)
T 4euy_A 19 QLVLLFIK-TENCGVCDVMLRKVNYVLENYN--YVEKIEILLQD----------------------------MQEIAGRY 67 (105)
T ss_dssp SEEEEEEE-ESSCHHHHHHHHHHHHHHHTCT--TEEEEEEEECC----------------------------C-------
T ss_pred CCEEEEEe-CCCCcchHHHHHHHHHHHHHcC--CceEEEEECCC----------------------------CHHHHHhc
Confidence 48999999 9999999999999999999884 68888887653 23677889
Q ss_pred CCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHH
Q 024201 189 GVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 189 gv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l 235 (271)
++. .+|+++++ ++|+++....+. .+.+++.+.|+.+
T Consensus 68 ~v~------~~Pt~~~~-~~G~~~~~~~g~----~~~~~l~~~l~~~ 103 (105)
T 4euy_A 68 AVF------TGPTVLLF-YNGKEILRESRF----ISLENLERTIQLF 103 (105)
T ss_dssp --C------CCCEEEEE-ETTEEEEEEESS----CCHHHHHHHHHTT
T ss_pred CCC------CCCEEEEE-eCCeEEEEEeCC----cCHHHHHHHHHHh
Confidence 998 89999999 499999886543 3567777776643
No 147
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.16 E-value=1.9e-10 Score=84.64 Aligned_cols=87 Identities=14% Similarity=0.261 Sum_probs=68.5
Q ss_pred CcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHHH
Q 024201 108 KKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKS 187 (271)
Q Consensus 108 kk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ 187 (271)
++++||+|| ++||+.|+...+.+.++++++++ ++.++.|+.+. +.++++.
T Consensus 18 ~~~~~v~f~-~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~----------------------------~~~~~~~ 67 (105)
T 1fb6_A 18 EVPVMVDFW-APWCGPCKLIAPVIDELAKEYSG-KIAVYKLNTDE----------------------------APGIATQ 67 (105)
T ss_dssp SSCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTT----------------------------CHHHHHH
T ss_pred CCcEEEEEE-CCCChHHHHHHHHHHHHHHHhcC-ceEEEEEcCcc----------------------------hHHHHHh
Confidence 348999999 89999999999999999998875 48888887653 2468889
Q ss_pred hCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHH
Q 024201 188 YGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 188 ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l 235 (271)
|++. .+|+++++ ++|+++....+. ...+++.+.|+.+
T Consensus 68 ~~v~------~~Pt~~~~-~~g~~~~~~~G~----~~~~~l~~~l~~~ 104 (105)
T 1fb6_A 68 YNIR------SIPTVLFF-KNGERKESIIGA----VPKSTLTDSIEKY 104 (105)
T ss_dssp TTCC------SSSEEEEE-ETTEEEEEEEEC----CCHHHHHHHHHHH
T ss_pred CCCC------cccEEEEE-eCCeEEEEEecC----CCHHHHHHHHHhh
Confidence 9998 89997777 799999886543 3456666666643
No 148
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.16 E-value=2.4e-10 Score=91.00 Aligned_cols=87 Identities=8% Similarity=0.199 Sum_probs=71.6
Q ss_pred cCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHH
Q 024201 106 IGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSIS 185 (271)
Q Consensus 106 ~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~ 185 (271)
+++ ++||+|| ++||++|+...|.|.++++++. ++.++.|.++. +.+++
T Consensus 31 ~~~-~vvv~F~-a~wC~~C~~~~p~l~~l~~~~~--~v~~~~vd~~~----------------------------~~~l~ 78 (153)
T 2wz9_A 31 AKS-LLVVHFW-APWAPQCAQMNEVMAELAKELP--QVSFVKLEAEG----------------------------VPEVS 78 (153)
T ss_dssp TTS-CEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTT----------------------------SHHHH
T ss_pred CCC-eEEEEEE-CCCCHhHHHHHHHHHHHHHHcC--CeEEEEEECCC----------------------------CHHHH
Confidence 366 8999999 9999999999999999998874 79999888763 24688
Q ss_pred HHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHHH
Q 024201 186 KSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQ 236 (271)
Q Consensus 186 ~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l~ 236 (271)
+.|++. .+|++++++ +|+++....+ ...+++.+.|+.+.
T Consensus 79 ~~~~v~------~~Pt~~~~~-~G~~~~~~~G-----~~~~~l~~~i~~~l 117 (153)
T 2wz9_A 79 EKYEIS------SVPTFLFFK-NSQKIDRLDG-----AHAPELTKKVQRHA 117 (153)
T ss_dssp HHTTCC------SSSEEEEEE-TTEEEEEEES-----SCHHHHHHHHHHHS
T ss_pred HHcCCC------CCCEEEEEE-CCEEEEEEeC-----CCHHHHHHHHHHHh
Confidence 999999 899999999 9999987653 24567777777653
No 149
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.16 E-value=1.4e-10 Score=87.70 Aligned_cols=89 Identities=17% Similarity=0.316 Sum_probs=69.4
Q ss_pred cccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCC
Q 024201 102 LSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADIT 181 (271)
Q Consensus 102 Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~ 181 (271)
+.+..|+ ++||+|| ++||++|+...|.+.++++++ ++.++.|..|. +
T Consensus 28 l~~~~~~-~~vv~f~-a~wC~~C~~~~~~~~~~~~~~---~~~~~~vd~~~----------------------------~ 74 (117)
T 2xc2_A 28 LEQHKNK-LVVVDFF-ATWCGPCKTIAPLFKELSEKY---DAIFVKVDVDK----------------------------L 74 (117)
T ss_dssp HHHTTTS-CEEEEEE-CTTCHHHHHHHHHHHHHHTTS---SSEEEEEETTT----------------------------S
T ss_pred HHhCCCC-EEEEEEE-CCCCHhHHHHhHHHHHHHHHc---CcEEEEEECCc----------------------------c
Confidence 3444566 8999999 899999999999999988877 78888887752 3
Q ss_pred hHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHH
Q 024201 182 KSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 182 ~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l 235 (271)
.++++.|++. .+|+++++ ++|+++....+ .+.+++.+.|+.+
T Consensus 75 ~~~~~~~~v~------~~Pt~~~~-~~G~~~~~~~G-----~~~~~l~~~l~~~ 116 (117)
T 2xc2_A 75 EETARKYNIS------AMPTFIAI-KNGEKVGDVVG-----ASIAKVEDMIKKF 116 (117)
T ss_dssp HHHHHHTTCC------SSSEEEEE-ETTEEEEEEES-----SCHHHHHHHHHHH
T ss_pred HHHHHHcCCC------ccceEEEE-eCCcEEEEEeC-----CCHHHHHHHHHHh
Confidence 5688899998 89997666 79999987654 2456666666543
No 150
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.15 E-value=2.5e-10 Score=84.13 Aligned_cols=89 Identities=20% Similarity=0.316 Sum_probs=69.3
Q ss_pred ccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCCh
Q 024201 103 SDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITK 182 (271)
Q Consensus 103 sd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~ 182 (271)
.+.+++ ++||+|| ++||+.|....+.+.++.++++ .++.++.|..|. +.
T Consensus 16 ~~~~~~-~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~-~~~~~~~v~~~~----------------------------~~ 64 (106)
T 1xwb_A 16 TKASGK-LVVLDFF-ATWCGPCKMISPKLVELSTQFA-DNVVVLKVDVDE----------------------------CE 64 (106)
T ss_dssp HHHTTS-EEEEEEE-CTTCHHHHHHHHHHHHHHHHTT-TTEEEEEEETTT----------------------------CH
T ss_pred HhcCCC-EEEEEEE-CCcCHHHHHhhHHHHHHHHHhC-CCeEEEEEeccc----------------------------hH
Confidence 334566 8999999 8999999999999999999886 368888888752 35
Q ss_pred HHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHH
Q 024201 183 SISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQA 234 (271)
Q Consensus 183 ~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~ 234 (271)
++++.|++. .+|+++++ ++|+++....+ .+.+++.+.|+.
T Consensus 65 ~~~~~~~v~------~~Pt~~~~-~~G~~~~~~~g-----~~~~~l~~~i~~ 104 (106)
T 1xwb_A 65 DIAMEYNIS------SMPTFVFL-KNGVKVEEFAG-----ANAKRLEDVIKA 104 (106)
T ss_dssp HHHHHTTCC------SSSEEEEE-ETTEEEEEEES-----CCHHHHHHHHHH
T ss_pred HHHHHcCCC------cccEEEEE-cCCcEEEEEcC-----CCHHHHHHHHHH
Confidence 688899998 88986666 79999887643 245666666654
No 151
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.15 E-value=3.1e-10 Score=83.30 Aligned_cols=89 Identities=16% Similarity=0.245 Sum_probs=69.9
Q ss_pred ccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCCh
Q 024201 103 SDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITK 182 (271)
Q Consensus 103 sd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~ 182 (271)
.+..++ ++||+|| ++|||.|....+.|.++.+++. ++.++.|..+. +.
T Consensus 15 ~~~~~~-~~~v~f~-~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~----------------------------~~ 62 (104)
T 2vim_A 15 NENKGR-LIVVDFF-AQWCGPCRNIAPKVEALAKEIP--EVEFAKVDVDQ----------------------------NE 62 (104)
T ss_dssp HTTTTS-CEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTT----------------------------CH
T ss_pred HhcCCC-eEEEEEE-CCCCHHHHHhhHHHHHHHHHCC--CCEEEEEeccC----------------------------CH
Confidence 334566 8999999 9999999999999999998885 79999988753 34
Q ss_pred HHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHH
Q 024201 183 SISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 183 ~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l 235 (271)
++++.|++. ..|+++++ ++|+++....+ .+.+++.+.|+.+
T Consensus 63 ~~~~~~~v~------~~Pt~~~~-~~g~~~~~~~G-----~~~~~l~~~l~~~ 103 (104)
T 2vim_A 63 EAAAKYSVT------AMPTFVFI-KDGKEVDRFSG-----ANETKLRETITRH 103 (104)
T ss_dssp HHHHHTTCC------SSSEEEEE-ETTEEEEEEES-----SCHHHHHHHHHHH
T ss_pred HHHHHcCCc------cccEEEEE-eCCcEEEEEeC-----CCHHHHHHHHHhh
Confidence 688899998 89997777 59999888654 2456666666543
No 152
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.15 E-value=3.2e-10 Score=90.72 Aligned_cols=86 Identities=8% Similarity=0.177 Sum_probs=71.5
Q ss_pred cEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHHHh
Q 024201 109 KYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSY 188 (271)
Q Consensus 109 k~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~y 188 (271)
+++||+|| ++||++|+...|.|.++++++++ ++.++.|+.|. +.++++.|
T Consensus 65 ~~vlv~F~-a~wC~~C~~~~p~l~~la~~~~~-~v~~~~vd~~~----------------------------~~~l~~~~ 114 (155)
T 2ppt_A 65 LPLLVDFW-APWCGPCRQMAPQFQAAAATLAG-QVRLAKIDTQA----------------------------HPAVAGRH 114 (155)
T ss_dssp SCEEEEEE-CTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETTT----------------------------STHHHHHT
T ss_pred CcEEEEEE-CCCCHHHHHHHHHHHHHHHHccC-CEEEEEEeCCc----------------------------cHHHHHHc
Confidence 48999999 99999999999999999999875 48898888763 24688999
Q ss_pred CCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHH
Q 024201 189 GVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 189 gv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l 235 (271)
++. .+|+++++ ++|+++....+. .+.+++.+.|+.+
T Consensus 115 ~i~------~~Pt~~~~-~~G~~~~~~~G~----~~~~~l~~~l~~~ 150 (155)
T 2ppt_A 115 RIQ------GIPAFILF-HKGRELARAAGA----RPASELVGFVRGK 150 (155)
T ss_dssp TCC------SSSEEEEE-ETTEEEEEEESC----CCHHHHHHHHHHH
T ss_pred CCC------cCCEEEEE-eCCeEEEEecCC----CCHHHHHHHHHHH
Confidence 999 89999999 799999886543 3567777777755
No 153
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.15 E-value=2.7e-10 Score=87.23 Aligned_cols=86 Identities=15% Similarity=0.193 Sum_probs=69.6
Q ss_pred EEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHHHhC
Q 024201 110 YVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYG 189 (271)
Q Consensus 110 ~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~yg 189 (271)
.+||+|| ++||++|+...|.|.++++++++.++.++.|.++. +.++++.|+
T Consensus 24 ~vlv~f~-a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~----------------------------~~~~~~~~~ 74 (126)
T 1x5e_A 24 DWMIEFY-APWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTE----------------------------QPGLSGRFI 74 (126)
T ss_dssp EEEEEEE-CSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTT----------------------------CHHHHHHTT
T ss_pred CEEEEEE-CCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcC----------------------------CHHHHHHcC
Confidence 4899999 99999999999999999999987689999887653 245889999
Q ss_pred CccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHHH
Q 024201 190 VLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQ 236 (271)
Q Consensus 190 v~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l~ 236 (271)
+. .+|+++++ ++|++ ..+.+ ....+++.+.|+.+.
T Consensus 75 v~------~~Pt~~~~-~~G~~-~~~~G----~~~~~~l~~~l~~~~ 109 (126)
T 1x5e_A 75 IN------ALPTIYHC-KDGEF-RRYQG----PRTKKDFINFISDKE 109 (126)
T ss_dssp CC------SSSEEEEE-ETTEE-EECCS----CCCHHHHHHHHHTCG
T ss_pred Cc------ccCEEEEE-eCCeE-EEeec----CCCHHHHHHHHHHHh
Confidence 98 89999999 89996 33322 245778888887654
No 154
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.14 E-value=2.8e-10 Score=83.80 Aligned_cols=89 Identities=16% Similarity=0.170 Sum_probs=71.0
Q ss_pred ccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCCh
Q 024201 103 SDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITK 182 (271)
Q Consensus 103 sd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~ 182 (271)
.+.+++ ++||+|| ++||+.|+...|.+.++.++++ ++.++.|..|. +.
T Consensus 16 ~~~~~~-~~~v~f~-~~~C~~C~~~~~~~~~~~~~~~--~~~~~~vd~~~----------------------------~~ 63 (105)
T 3m9j_A 16 DAAGDK-LVVVDFS-ATWCGPCKMIKPFFHSLSEKYS--NVIFLEVDVDD----------------------------CQ 63 (105)
T ss_dssp HHTTTS-CEEEEEE-CTTCHHHHHHHHHHHHHHHHST--TSEEEEEETTT----------------------------CH
T ss_pred HhcCCC-eEEEEEE-CCCChhhHHHHHHHHHHHHHcc--CeEEEEEEhhh----------------------------hH
Confidence 334566 8999999 8999999999999999999886 58888887653 35
Q ss_pred HHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHH
Q 024201 183 SISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 183 ~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l 235 (271)
++.+.|++. ..|+++++ ++|+++....+. +.+++.+.|+.+
T Consensus 64 ~~~~~~~v~------~~Pt~~~~-~~g~~~~~~~g~-----~~~~l~~~l~~~ 104 (105)
T 3m9j_A 64 DVASESEVK------SMPTFQFF-KKGQKVGEFSGA-----NKEKLEATINEL 104 (105)
T ss_dssp HHHHHTTCC------BSSEEEEE-ETTEEEEEEESS-----CHHHHHHHHHHH
T ss_pred HHHHHcCCC------cCcEEEEE-ECCeEEEEEeCC-----CHHHHHHHHHHh
Confidence 688899998 89999999 789998886532 466776666643
No 155
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.14 E-value=4.9e-10 Score=83.35 Aligned_cols=86 Identities=13% Similarity=0.254 Sum_probs=70.6
Q ss_pred cEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHHHh
Q 024201 109 KYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSY 188 (271)
Q Consensus 109 k~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~y 188 (271)
+++||+|| +.||++|+...|.+.++.+++++ ++.++.|.+|. +.++++.|
T Consensus 23 ~~vlv~f~-a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~vd~~~----------------------------~~~l~~~~ 72 (111)
T 3gnj_A 23 KACLVMFS-RKNCHVCQKVTPVLEELRLNYEE-SFGFYYVDVEE----------------------------EKTLFQRF 72 (111)
T ss_dssp CCEEEEEE-CSSCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTT----------------------------CHHHHHHT
T ss_pred CEEEEEEe-CCCChhHHHHHHHHHHHHHHcCC-ceEEEEEECCc----------------------------ChhHHHhc
Confidence 48999999 89999999999999999999874 58888887753 34788999
Q ss_pred CCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHH
Q 024201 189 GVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 189 gv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l 235 (271)
++. .+|+++++ ++|+++....+. ...+++.+.|+.+
T Consensus 73 ~v~------~~Pt~~~~-~~g~~~~~~~g~----~~~~~l~~~l~~~ 108 (111)
T 3gnj_A 73 SLK------GVPQILYF-KDGEYKGKMAGD----VEDDEVEQMIADV 108 (111)
T ss_dssp TCC------SSCEEEEE-ETTEEEEEEESS----CCHHHHHHHHHHH
T ss_pred CCC------cCCEEEEE-ECCEEEEEEecc----CCHHHHHHHHHHH
Confidence 998 89999999 799998876543 3567777777654
No 156
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.13 E-value=4.1e-10 Score=83.16 Aligned_cols=87 Identities=11% Similarity=0.242 Sum_probs=70.7
Q ss_pred CCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHH
Q 024201 107 GKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISK 186 (271)
Q Consensus 107 gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~ 186 (271)
++ ++||+|| ++||+.|....+.|.++.+++.+ ++.++.|+.+. +.++++
T Consensus 18 ~~-~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~----------------------------~~~~~~ 66 (109)
T 2yzu_A 18 HP-LVLVDFW-AEWCAPCRMIAPILEEIAKEYEG-KLLVAKLDVDE----------------------------NPKTAM 66 (109)
T ss_dssp CS-EEEEEEE-CTTCHHHHHHHHHHHHHHHHTBT-TBEEEEEETTT----------------------------CHHHHH
T ss_pred CC-eEEEEEE-CCCCHHHHHhhHHHHHHHHHhhC-ceEEEEEECCC----------------------------CHhHHH
Confidence 44 8999999 99999999999999999998874 58888888753 246888
Q ss_pred HhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHH
Q 024201 187 SYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 187 ~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l 235 (271)
.|++. .+|+++++ ++|+++....+. ...+++.+.|+.+
T Consensus 67 ~~~v~------~~Pt~~~~-~~g~~~~~~~g~----~~~~~l~~~l~~~ 104 (109)
T 2yzu_A 67 RYRVM------SIPTVILF-KDGQPVEVLVGA----QPKRNYQAKIEKH 104 (109)
T ss_dssp HTTCC------SSSEEEEE-ETTEEEEEEESC----CCHHHHHHHHHTT
T ss_pred hCCCC------cCCEEEEE-eCCcEeeeEeCC----CCHHHHHHHHHHH
Confidence 99998 89999999 899999876543 3467777777644
No 157
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.13 E-value=2.3e-10 Score=86.59 Aligned_cols=84 Identities=13% Similarity=0.241 Sum_probs=66.7
Q ss_pred cCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHH
Q 024201 106 IGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSIS 185 (271)
Q Consensus 106 ~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~ 185 (271)
.|+ ++||+|| ++||+.|+...|.|.++++++. ++.++.|.+|. +.+++
T Consensus 29 ~~k-~vvv~F~-a~wC~~C~~~~p~l~~~~~~~~--~v~~~~vd~~~----------------------------~~~l~ 76 (114)
T 2oe3_A 29 QND-KLVIDFY-ATWCGPCKMMQPHLTKLIQAYP--DVRFVKCDVDE----------------------------SPDIA 76 (114)
T ss_dssp HCS-EEEEEEE-CTTCHHHHHTHHHHHHHHHHCT--TSEEEEEETTT----------------------------CHHHH
T ss_pred CCC-EEEEEEE-CCCCHHHHHHHHHHHHHHHHCC--CCEEEEEECCC----------------------------CHHHH
Confidence 455 8999999 9999999999999999999886 48888887653 34688
Q ss_pred HHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHH
Q 024201 186 KSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQ 233 (271)
Q Consensus 186 ~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~ 233 (271)
+.|++. .+|+++++ ++|+++....+. ..+++.+.|+
T Consensus 77 ~~~~v~------~~Pt~~~~-~~G~~~~~~~G~-----~~~~l~~~l~ 112 (114)
T 2oe3_A 77 KECEVT------AMPTFVLG-KDGQLIGKIIGA-----NPTALEKGIK 112 (114)
T ss_dssp HHTTCC------SBSEEEEE-ETTEEEEEEESS-----CHHHHHHHHH
T ss_pred HHCCCC------cccEEEEE-eCCeEEEEEeCC-----CHHHHHHHHH
Confidence 899998 89997766 899999886543 2556655554
No 158
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.13 E-value=5.6e-12 Score=102.01 Aligned_cols=104 Identities=13% Similarity=0.143 Sum_probs=75.2
Q ss_pred eEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEE
Q 024201 99 NVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIA 178 (271)
Q Consensus 99 ~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~ 178 (271)
.+.+...+|+ ++||+|| ++||++|+.+.|.|.++.+.++. ++.++.|++|.....
T Consensus 38 ~~~~~~~~~k-~vlv~F~-a~WC~~C~~~~p~l~~~~~~~~~-~~~~~~v~~d~~~~~---------------------- 92 (164)
T 1sen_A 38 GKKEAAASGL-PLMVIIH-KSWCGACKALKPKFAESTEISEL-SHNFVMVNLEDEEEP---------------------- 92 (164)
T ss_dssp HHHHHHHHTC-CEEEEEE-CTTCHHHHHHHHHHHTCHHHHHH-HTTSEEEEEEGGGSC----------------------
T ss_pred HHHHHHhcCC-eEEEEEE-CCCCHHHHHHHHHHHHHHHHhhc-CCeEEEEEecCCchH----------------------
Confidence 5666777888 8999999 99999999999999997665543 578888887642110
Q ss_pred cCChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCC------CCCHHHHHHHHHHHH
Q 024201 179 DITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAI------GRSVDETLRTLQALQ 236 (271)
Q Consensus 179 D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~------~~~~~e~l~~l~~l~ 236 (271)
+.+.|++. +..+|+++|+|++|+++....+.... ....+++++.|+.+.
T Consensus 93 -----~~~~~~~~----~~~~Pt~~~~d~~G~~~~~~~G~~~~~~~~~~~~~~~~l~~~l~~~l 147 (164)
T 1sen_A 93 -----KDEDFSPD----GGYIPRILFLDPSGKVHPEIINENGNPSYKYFYVSAEQVVQGMKEAQ 147 (164)
T ss_dssp -----SCGGGCTT----CSCSSEEEEECTTSCBCTTCCCTTSCTTSTTCCCSHHHHHHHHHHHH
T ss_pred -----HHHHhccc----CCcCCeEEEECCCCCEEEEEeCCCCccchhcccCCHHHHHHHHHHHH
Confidence 12234442 11689999999999999876553221 257889999888764
No 159
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.13 E-value=3.8e-10 Score=86.67 Aligned_cols=87 Identities=15% Similarity=0.221 Sum_probs=69.4
Q ss_pred cEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHHHh
Q 024201 109 KYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSY 188 (271)
Q Consensus 109 k~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~y 188 (271)
+++||+|| ++||++|+...|.|.++++++++ .+.++.|..| .+.++++.|
T Consensus 36 ~~~lv~f~-a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~----------------------------~~~~l~~~~ 85 (130)
T 2dml_A 36 GLWLVEFY-APWCGHCQRLTPEWKKAATALKD-VVKVGAVNAD----------------------------KHQSLGGQY 85 (130)
T ss_dssp SCEEEEEE-CTTCSTTGGGHHHHHHHHHHTTT-TSEEEEEETT----------------------------TCHHHHHHH
T ss_pred CeEEEEEE-CCCCHHHHhhCHHHHHHHHHhcC-ceEEEEEeCC----------------------------CCHHHHHHc
Confidence 48999999 99999999999999999999875 3788877754 245788999
Q ss_pred CCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHH
Q 024201 189 GVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 189 gv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l 235 (271)
++. .+|++++++++|+++..+.+ ....+++++.|...
T Consensus 86 ~v~------~~Pt~~~~~~~~~~~~~~~G----~~~~~~l~~~l~~~ 122 (130)
T 2dml_A 86 GVQ------GFPTIKIFGANKNKPEDYQG----GRTGEAIVDAALSA 122 (130)
T ss_dssp TCC------SSSEEEEESSCTTSCEECCS----CCSHHHHHHHHHHH
T ss_pred CCC------ccCEEEEEeCCCCeEEEeec----CCCHHHHHHHHHHH
Confidence 998 89999999999985555433 24567787777654
No 160
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.13 E-value=6.2e-10 Score=87.18 Aligned_cols=88 Identities=14% Similarity=0.167 Sum_probs=70.9
Q ss_pred CcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHHH
Q 024201 108 KKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKS 187 (271)
Q Consensus 108 kk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ 187 (271)
++++||+|| ++||+.|+...|.|.++++++++ .+.++.|.+|. +.++++.
T Consensus 24 ~~~vlv~F~-a~wC~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~~----------------------------~~~l~~~ 73 (140)
T 3hz4_A 24 KKPVVVMFY-SPACPYCKAMEPYFEEYAKEYGS-SAVFGRINIAT----------------------------NPWTAEK 73 (140)
T ss_dssp SSCEEEEEE-CTTCHHHHHHHHHHHHHHHHHTT-TSEEEEEETTT----------------------------CHHHHHH
T ss_pred CCcEEEEEE-CCCChhHHHHHHHHHHHHHHhCC-ceEEEEEECCc----------------------------CHhHHHH
Confidence 348999999 99999999999999999999875 48888887643 3468889
Q ss_pred hCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHHH
Q 024201 188 YGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQ 236 (271)
Q Consensus 188 ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l~ 236 (271)
|++. .+|+++++ ++|+++....+. ...+++.+.|+.+.
T Consensus 74 ~~v~------~~Pt~~~~-~~G~~~~~~~G~----~~~~~l~~~l~~~l 111 (140)
T 3hz4_A 74 YGVQ------GTPTFKFF-CHGRPVWEQVGQ----IYPSILKNAVRDML 111 (140)
T ss_dssp HTCC------EESEEEEE-ETTEEEEEEESS----CCHHHHHHHHHHHH
T ss_pred CCCC------cCCEEEEE-eCCcEEEEEcCC----CCHHHHHHHHHHHh
Confidence 9999 89988877 799998876543 35677777776654
No 161
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.13 E-value=4.2e-10 Score=83.56 Aligned_cols=86 Identities=10% Similarity=0.083 Sum_probs=67.7
Q ss_pred cCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHH
Q 024201 106 IGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSIS 185 (271)
Q Consensus 106 ~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~ 185 (271)
.++ ++||+|| ++||++|+...|.+.++.+++. ++.++.|..|. +.+++
T Consensus 20 ~~~-~v~v~f~-a~wC~~C~~~~~~~~~~~~~~~--~~~~~~vd~~~----------------------------~~~~~ 67 (107)
T 1gh2_A 20 GSR-LAVVKFT-MRGCGPCLRIAPAFSSMSNKYP--QAVFLEVDVHQ----------------------------CQGTA 67 (107)
T ss_dssp TTS-CEEEEEE-CSSCHHHHHHHHHHHHHHHHCT--TSEEEEEETTT----------------------------SHHHH
T ss_pred CCC-EEEEEEE-CCCChhhHHHHHHHHHHHHHCC--CcEEEEEECcc----------------------------CHHHH
Confidence 355 8999999 9999999999999999999883 68888887753 24688
Q ss_pred HHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHH
Q 024201 186 KSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 186 ~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l 235 (271)
+.|++. .+|+++++ ++|+++....+ ...+++.+.|+.+
T Consensus 68 ~~~~v~------~~Pt~~~~-~~G~~~~~~~G-----~~~~~l~~~l~~~ 105 (107)
T 1gh2_A 68 ATNNIS------ATPTFQFF-RNKVRIDQYQG-----ADAVGLEEKIKQH 105 (107)
T ss_dssp HHTTCC------SSSEEEEE-ETTEEEEEEES-----SCHHHHHHHHHHH
T ss_pred HhcCCC------cccEEEEE-ECCeEEEEEeC-----CCHHHHHHHHHHh
Confidence 899998 89998888 79999987654 2345565665543
No 162
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.12 E-value=4.2e-10 Score=84.63 Aligned_cols=86 Identities=26% Similarity=0.392 Sum_probs=69.9
Q ss_pred cCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHH
Q 024201 106 IGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSIS 185 (271)
Q Consensus 106 ~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~ 185 (271)
.|+ ++||+|| ++||+.|+...+.|.++.++++ ++.++.|..|. +.+++
T Consensus 27 ~~~-~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~----------------------------~~~~~ 74 (118)
T 2vm1_A 27 TGK-LVIIDFT-ASWCGPCRVIAPVFAEYAKKFP--GAIFLKVDVDE----------------------------LKDVA 74 (118)
T ss_dssp HTC-CEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTT----------------------------SHHHH
T ss_pred CCC-EEEEEEE-CCCCHhHHHHhHHHHHHHHHCC--CcEEEEEEccc----------------------------CHHHH
Confidence 366 8999999 8999999999999999999886 78888887752 35688
Q ss_pred HHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHH
Q 024201 186 KSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 186 ~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l 235 (271)
+.|++. .+|+++++ ++|+++....+ .+.+++.+.|+.+
T Consensus 75 ~~~~v~------~~Pt~~~~-~~g~~~~~~~g-----~~~~~l~~~l~~~ 112 (118)
T 2vm1_A 75 EAYNVE------AMPTFLFI-KDGEKVDSVVG-----GRKDDIHTKIVAL 112 (118)
T ss_dssp HHTTCC------SBSEEEEE-ETTEEEEEEES-----CCHHHHHHHHHHH
T ss_pred HHcCCC------cCcEEEEE-eCCeEEEEecC-----CCHHHHHHHHHHH
Confidence 899998 89998777 79999987643 2467777777665
No 163
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.11 E-value=6.5e-10 Score=88.93 Aligned_cols=108 Identities=8% Similarity=0.048 Sum_probs=77.2
Q ss_pred CCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHH
Q 024201 107 GKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISK 186 (271)
Q Consensus 107 gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~ 186 (271)
++++|||.|| ++||++|+...|.|.++.+++.+ .+.|+-|.+|. ..+++.
T Consensus 40 ~~k~VVVdF~-A~WCgPCk~m~PvleelA~e~~~-~v~f~kVDVDe----------------------------~~e~a~ 89 (160)
T 2av4_A 40 DERLVCIRFG-HDYDPDCMKMDELLYKVADDIKN-FCVIYLVDITE----------------------------VPDFNT 89 (160)
T ss_dssp SSSEEEEEEE-CTTSHHHHHHHHHHHHHHHHHTT-TEEEEEEETTT----------------------------CCTTTT
T ss_pred CCCEEEEEEE-CCCChhHHHHHHHHHHHHHHccC-CcEEEEEECCC----------------------------CHHHHH
Confidence 4459999999 99999999999999999999864 37777777763 346788
Q ss_pred HhCCccCCCCccceEEEEEcCCCcEEEEEeccC----CCCC--CHHHHHHHHHHHHHhhhCC--CcccCCCCC
Q 024201 187 SYGVLIPDQGIALRGLFIIDKEGVIQHSTINNL----AIGR--SVDETLRTLQALQYVQENP--DEVCPAGWK 251 (271)
Q Consensus 187 ~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~----~~~~--~~~e~l~~l~~l~~~~~~~--~~~~p~~~~ 251 (271)
.|+|. .+|+++++ ++|+.+.+.++.. -.+. +.+++++.|+.+..-+.+. -+.||.++-
T Consensus 90 ~y~V~------siPT~~fF-k~G~~v~vd~Gtgd~~k~vGa~~~k~~l~~~ie~~~r~a~~g~~~v~~p~~~~ 155 (160)
T 2av4_A 90 MYELY------DPVSVMFF-YRNKHMMIDLGTGNNNKINWPMNNKQEFIDIVETIFRGARKGRGLVISPKDYS 155 (160)
T ss_dssp TTTCC------SSEEEEEE-ETTEEEEEECSSSCCSCBCSCCCCHHHHHHHHHHHHHHHHTTCSEEECSSCC-
T ss_pred HcCCC------CCCEEEEE-ECCEEEEEecCCCCcCeEEeecCCHHHHHHHHHHHHHHhhcCCeEEECCCccc
Confidence 99999 89999888 6898875321111 1122 3678888888765444332 455676653
No 164
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.11 E-value=4.9e-10 Score=84.02 Aligned_cols=88 Identities=15% Similarity=0.184 Sum_probs=69.1
Q ss_pred cCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHH
Q 024201 106 IGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSIS 185 (271)
Q Consensus 106 ~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~ 185 (271)
..++++||+|| ++||++|+...|.|.++.+++. ++.++.|..+. +.+++
T Consensus 17 ~~~~~~vv~f~-a~wC~~C~~~~~~l~~~~~~~~--~v~~~~vd~~~----------------------------~~~l~ 65 (110)
T 2l6c_A 17 EGLSDAIVFFH-KNLCPHCKNMEKVLDKFGARAP--QVAISSVDSEA----------------------------RPELM 65 (110)
T ss_dssp TTCSEEEEEEE-CSSCSTHHHHHHHHHHHHTTCT--TSCEEEEEGGG----------------------------CHHHH
T ss_pred HcCCCEEEEEE-CCCCHhHHHHHHHHHHHHHHCC--CcEEEEEcCcC----------------------------CHHHH
Confidence 33348999999 8999999999999999888765 67787776542 35688
Q ss_pred HHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHH
Q 024201 186 KSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 186 ~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l 235 (271)
+.|++. .+|+++++ ++|+++.+..+. .+.+++.+.++..
T Consensus 66 ~~~~v~------~~Pt~~~~-~~G~~v~~~~G~----~~~~~l~~~~~~~ 104 (110)
T 2l6c_A 66 KELGFE------RVPTLVFI-RDGKVAKVFSGI----MNPRELQALYASI 104 (110)
T ss_dssp HHTTCC------SSCEEEEE-ESSSEEEEEESC----CCHHHHHHHHHTC
T ss_pred HHcCCc------ccCEEEEE-ECCEEEEEEcCC----CCHHHHHHHHHHH
Confidence 999998 89999999 899999887543 3466776666543
No 165
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.11 E-value=1.7e-10 Score=89.93 Aligned_cols=93 Identities=14% Similarity=0.122 Sum_probs=69.8
Q ss_pred EEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHHHhC
Q 024201 110 YVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYG 189 (271)
Q Consensus 110 ~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~yg 189 (271)
++||+|| ++||++|+.+.|.|.+++++++ +.++.|.+++.... .+. |...++++.|+
T Consensus 33 ~vlv~F~-a~wC~~C~~~~p~l~~l~~~~~---v~~~~vd~~~~~~~-~~~------------------d~~~~l~~~~~ 89 (135)
T 3emx_A 33 DAILAVY-SKTCPHCHRDWPQLIQASKEVD---VPIVMFIWGSLIGE-REL------------------SAARLEMNKAG 89 (135)
T ss_dssp SEEEEEE-ETTCHHHHHHHHHHHHHHTTCC---SCEEEEEECTTCCH-HHH------------------HHHHHHHHHHT
T ss_pred cEEEEEE-CCcCHhhhHhChhHHHHHHHCC---CEEEEEECCCchhh-hhh------------------hhhHHHHHHcC
Confidence 7999999 9999999999999999998874 88999988653322 111 23367899999
Q ss_pred CccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHHH
Q 024201 190 VLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQ 236 (271)
Q Consensus 190 v~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l~ 236 (271)
+. .+|++++++ +|+++....+. ...+.+.+.++.+.
T Consensus 90 v~------~~Pt~~~~~-~G~~v~~~~G~----~~~~~~~~~i~~~~ 125 (135)
T 3emx_A 90 VE------GTPTLVFYK-EGRIVDKLVGA----TPWSLKVEKAREIY 125 (135)
T ss_dssp CC------SSSEEEEEE-TTEEEEEEESC----CCHHHHHHHHHHHC
T ss_pred Cc------eeCeEEEEc-CCEEEEEEeCC----CCHHHHHHHHHHHh
Confidence 99 899776665 99999987653 34455555555553
No 166
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.10 E-value=2e-10 Score=89.42 Aligned_cols=88 Identities=14% Similarity=0.250 Sum_probs=68.9
Q ss_pred CCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcC--cEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHH
Q 024201 107 GKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLN--TEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSI 184 (271)
Q Consensus 107 gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~g--v~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~ 184 (271)
++ ++||+|| ++||++|+...|.|.++++++++++ +.++.|..+. +.++
T Consensus 34 ~~-~vlv~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~----------------------------~~~~ 83 (140)
T 2dj1_A 34 KD-TVLLEFY-APWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATS----------------------------ASML 83 (140)
T ss_dssp CS-EEEEEEC-CTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTT----------------------------CHHH
T ss_pred CC-eEEEEEE-CCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcc----------------------------cHHH
Confidence 44 8999999 8999999999999999999998764 6666665432 3578
Q ss_pred HHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHHH
Q 024201 185 SKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQ 236 (271)
Q Consensus 185 ~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l~ 236 (271)
++.|++. .+|+++|+ ++|+ +..+.+ ....+++.+.|+.+.
T Consensus 84 ~~~~~v~------~~Pt~~~~-~~G~-~~~~~g----~~~~~~l~~~l~~~~ 123 (140)
T 2dj1_A 84 ASKFDVS------GYPTIKIL-KKGQ-AVDYDG----SRTQEEIVAKVREVS 123 (140)
T ss_dssp HHHTTCC------SSSEEEEE-ETTE-EEECCS----CCCHHHHHHHHHHHH
T ss_pred HHHCCCC------ccCeEEEE-ECCc-EEEcCC----CCCHHHHHHHHHHhc
Confidence 9999998 89999999 7899 444322 346788888887663
No 167
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.10 E-value=5.1e-10 Score=86.25 Aligned_cols=87 Identities=17% Similarity=0.203 Sum_probs=70.1
Q ss_pred cCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHH
Q 024201 106 IGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSIS 185 (271)
Q Consensus 106 ~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~ 185 (271)
.++ ++||+|| ++||+.|+...|.|.++++++. ++.++.|.+|. +.+++
T Consensus 36 ~~k-~vvv~F~-a~wC~~C~~~~p~l~~l~~~~~--~v~~~~vd~d~----------------------------~~~l~ 83 (125)
T 1r26_A 36 EDI-LTVAWFT-AVWCGPCKTIERPMEKIAYEFP--TVKFAKVDADN----------------------------NSEIV 83 (125)
T ss_dssp SSS-CEEEEEE-CTTCHHHHHTHHHHHHHHHHCT--TSEEEEEETTT----------------------------CHHHH
T ss_pred cCC-EEEEEEE-CCcCHhHHHHHHHHHHHHHHCC--CCEEEEEECCC----------------------------CHHHH
Confidence 455 8999999 9999999999999999999884 69999888863 35688
Q ss_pred HHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHHH
Q 024201 186 KSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQ 236 (271)
Q Consensus 186 ~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l~ 236 (271)
+.|++. .+|+++++ ++|+++....+ .+.+++.+.|+.+.
T Consensus 84 ~~~~v~------~~Pt~~i~-~~G~~~~~~~G-----~~~~~l~~~l~~~l 122 (125)
T 1r26_A 84 SKCRVL------QLPTFIIA-RSGKMLGHVIG-----ANPGMLRQKLRDII 122 (125)
T ss_dssp HHTTCC------SSSEEEEE-ETTEEEEEEES-----SCHHHHHHHHHHHH
T ss_pred HHcCCC------cccEEEEE-eCCeEEEEEeC-----CCHHHHHHHHHHHh
Confidence 999998 89997666 89999987654 24577777777653
No 168
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.10 E-value=3.5e-10 Score=86.05 Aligned_cols=87 Identities=15% Similarity=0.245 Sum_probs=69.8
Q ss_pred CCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHH
Q 024201 107 GKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISK 186 (271)
Q Consensus 107 gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~ 186 (271)
++ ++||+|| ++||+.|+...|.|.++++++ .++.++.|.++. +.++++
T Consensus 23 ~~-~vlv~f~-a~wC~~C~~~~~~l~~l~~~~--~~v~~~~vd~~~----------------------------~~~~~~ 70 (118)
T 2f51_A 23 PG-LVLVDFF-ATWCGPCQRLGQILPSIAEAN--KDVTFIKVDVDK----------------------------NGNAAD 70 (118)
T ss_dssp SS-CEEEEEE-CTTCHHHHHHHHHHHHHHHHC--TTSEEEEEETTT----------------------------CHHHHH
T ss_pred CC-EEEEEEE-CCCCHHHHHHHHHHHHHHHHC--CCeEEEEEECCC----------------------------CHHHHH
Confidence 55 8999999 999999999999999999988 579999998763 246889
Q ss_pred HhCCccCCCCccceEEEEEcC---CCcEEEEEeccCCCCCCHHHHHHHHHHHH
Q 024201 187 SYGVLIPDQGIALRGLFIIDK---EGVIQHSTINNLAIGRSVDETLRTLQALQ 236 (271)
Q Consensus 187 ~ygv~~~~~g~~~P~~~lID~---~G~V~~~~~~~~~~~~~~~e~l~~l~~l~ 236 (271)
.|++. .+|++++++. +|+++....+. ..+++.+.++...
T Consensus 71 ~~~i~------~~Pt~~~~~~~~~~G~~~~~~~G~-----~~~~l~~~~~~~~ 112 (118)
T 2f51_A 71 AYGVS------SIPALFFVKKEGNEIKTLDQFVGA-----DVSRIKADIEKFK 112 (118)
T ss_dssp HTTCC------SSSEEEEEEEETTEEEEEEEEESC-----CHHHHHHHHHHHC
T ss_pred hcCCC------CCCEEEEEeCCCCcceEEEeecCC-----CHHHHHHHHHHhh
Confidence 99999 8999999975 49999887543 3456666665543
No 169
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=98.68 E-value=9.4e-12 Score=95.93 Aligned_cols=100 Identities=17% Similarity=0.217 Sum_probs=73.9
Q ss_pred ceeEecccccCCcEEEEEEecCCCCCChHHHHHHH---HHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcc
Q 024201 97 FINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAF---SDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLK 173 (271)
Q Consensus 97 g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L---~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~ 173 (271)
.+.+.+....|+ ++||+|| ++||++|+...|.+ .++.+.++. ++.++.|..+..
T Consensus 9 ~~~~~~~~~~~k-~vlv~f~-a~wC~~C~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~~-------------------- 65 (130)
T 2lst_A 9 PEALALAQAHGR-MVMVYFH-SEHCPYCQQMNTFVLSDPGVSRLLEA-RFVVASVSVDTP-------------------- 65 (130)
Confidence 457788888887 8999999 99999999999998 777777654 477777766431
Q ss_pred cceEEcCChHHHHHhCCccCCCCccceEEEEEcC-CCcE--EEEEeccCCCCCCHHHHHHHHHHH
Q 024201 174 YPLIADITKSISKSYGVLIPDQGIALRGLFIIDK-EGVI--QHSTINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 174 f~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~-~G~V--~~~~~~~~~~~~~~~e~l~~l~~l 235 (271)
...++++.|++. .+|+++|+|+ +|++ +....+. ...+++.+.|+.+
T Consensus 66 ------~~~~~~~~~~v~------~~Pt~~~~d~~~G~~~~~~~~~G~----~~~~~l~~~l~~~ 114 (130)
T 2lst_A 66 ------EGQELARRYRVP------GTPTFVFLVPKAGAWEEVGRLFGS----RPRAEFLKELRQV 114 (130)
Confidence 235678889998 8999999995 6998 6665443 2344556666544
No 170
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.09 E-value=1.7e-10 Score=89.00 Aligned_cols=91 Identities=10% Similarity=0.165 Sum_probs=65.2
Q ss_pred CCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhc-CcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHH
Q 024201 107 GKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKL-NTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSIS 185 (271)
Q Consensus 107 gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~-gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~ 185 (271)
++ ++||+|| ++||++|+...|.|.+++++++.+ ++.++.|..+. +..+.
T Consensus 25 ~~-~vlv~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~----------------------------~~~~~ 74 (133)
T 2dj3_A 25 KK-DVLIEFY-APWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATA----------------------------NDITN 74 (133)
T ss_dssp TS-EEEEEEC-CTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTT----------------------------SCCCC
T ss_pred CC-cEEEEEE-CCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCc----------------------------CHHHH
Confidence 55 8999999 999999999999999999999753 57777776642 11234
Q ss_pred HHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHH
Q 024201 186 KSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 186 ~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l 235 (271)
+.|++. .+|++++++++|++....+... ..+.+++.+.|+.+
T Consensus 75 ~~~~v~------~~Pt~~~~~~g~~~~~~~~~gg--~~~~~~l~~~l~~~ 116 (133)
T 2dj3_A 75 DQYKVE------GFPTIYFAPSGDKKNPIKFEGG--NRDLEHLSKFIDEH 116 (133)
T ss_dssp SSCCCS------SSSEEEEECTTCTTSCEECCSS--CCSTTHHHHHHHHH
T ss_pred hhcCCC------cCCEEEEEeCCCcccceEecCC--CcCHHHHHHHHHHh
Confidence 568888 8999999988776543322111 13456777777654
No 171
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.09 E-value=4.6e-10 Score=83.76 Aligned_cols=86 Identities=19% Similarity=0.313 Sum_probs=67.6
Q ss_pred cCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHH
Q 024201 106 IGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSIS 185 (271)
Q Consensus 106 ~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~ 185 (271)
.|+ ++||+|| ++||+.|....+.|.++.+++. ++.++.|..|. +.++.
T Consensus 25 ~~~-~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~--~v~~~~v~~~~----------------------------~~~~~ 72 (113)
T 1ti3_A 25 SQK-LIVVDFT-ASWCPPCKMIAPIFAELAKKFP--NVTFLKVDVDE----------------------------LKAVA 72 (113)
T ss_dssp SSS-EEEEEEE-CSSCHHHHHHHHHHHHHHHHCS--SEEEEEEETTT----------------------------CHHHH
T ss_pred cCC-eEEEEEE-CCCCHHHHHHHHHHHHHHHhCC--CcEEEEEEccc----------------------------cHHHH
Confidence 466 8999999 8999999999999999998875 68888887753 34678
Q ss_pred HHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHH
Q 024201 186 KSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 186 ~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l 235 (271)
+.|++. .+|+++++ ++|+++....+ . +.+++.+.|+.+
T Consensus 73 ~~~~v~------~~Pt~~~~-~~G~~~~~~~g-~----~~~~l~~~l~~~ 110 (113)
T 1ti3_A 73 EEWNVE------AMPTFIFL-KDGKLVDKTVG-A----DKDGLPTLVAKH 110 (113)
T ss_dssp HHHHCS------STTEEEEE-ETTEEEEEEEC-C----CTTHHHHHHHHH
T ss_pred HhCCCC------cccEEEEE-eCCEEEEEEec-C----CHHHHHHHHHHh
Confidence 889998 89998888 79999988654 2 234555555544
No 172
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.07 E-value=8.5e-10 Score=82.70 Aligned_cols=85 Identities=9% Similarity=0.221 Sum_probs=67.6
Q ss_pred cCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHH
Q 024201 106 IGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSIS 185 (271)
Q Consensus 106 ~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~ 185 (271)
.|+ ++||+|| ++||+.|....+.|.+++++++ ++.++.|..+. +.+++
T Consensus 25 ~~k-~vlv~f~-a~~C~~C~~~~~~l~~l~~~~~--~v~~~~vd~~~----------------------------~~~~~ 72 (112)
T 1syr_A 25 QNE-LVIVDFF-AEWCGPCKRIAPFYEECSKTYT--KMVFIKVDVDE----------------------------VSEVT 72 (112)
T ss_dssp HCS-EEEEEEE-CTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTT----------------------------THHHH
T ss_pred cCC-eEEEEEE-CCCCHHHHHHHHHHHHHHHHcC--CCEEEEEECCC----------------------------CHHHH
Confidence 455 8999999 9999999999999999999876 68999888763 23688
Q ss_pred HHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHH
Q 024201 186 KSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQA 234 (271)
Q Consensus 186 ~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~ 234 (271)
+.|++. .+|+++++ ++|+++....+. +.+++.+.|+.
T Consensus 73 ~~~~v~------~~Pt~~~~-~~G~~~~~~~G~-----~~~~l~~~l~~ 109 (112)
T 1syr_A 73 EKENIT------SMPTFKVY-KNGSSVDTLLGA-----NDSALKQLIEK 109 (112)
T ss_dssp HHTTCC------SSSEEEEE-ETTEEEEEEESC-----CHHHHHHHHHT
T ss_pred HHcCCC------cccEEEEE-ECCcEEEEEeCC-----CHHHHHHHHHH
Confidence 899998 88986665 699998876432 46677666654
No 173
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.06 E-value=1.5e-09 Score=84.70 Aligned_cols=88 Identities=11% Similarity=0.194 Sum_probs=71.0
Q ss_pred cCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHH
Q 024201 106 IGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSIS 185 (271)
Q Consensus 106 ~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~ 185 (271)
.+++ +||+|| ++||++|....+.|.++++++++ ++.++.|..+. +.+++
T Consensus 49 ~~~~-vvv~f~-~~~C~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~~----------------------------~~~l~ 97 (140)
T 1v98_A 49 GAPL-TLVDFF-APWCGPCRLVSPILEELARDHAG-RLKVVKVNVDE----------------------------HPGLA 97 (140)
T ss_dssp CCCE-EEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TEEEEEEETTT----------------------------CHHHH
T ss_pred cCCC-EEEEEE-CCCCHHHHHHHHHHHHHHHHccC-ceEEEEEECCC----------------------------CHHHH
Confidence 4554 899999 99999999999999999999875 58888888763 24688
Q ss_pred HHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHH
Q 024201 186 KSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 186 ~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l 235 (271)
+.|++. .+|+++++ ++|+++..+.+. ...+++.+.|+.+
T Consensus 98 ~~~~v~------~~Pt~~~~-~~G~~~~~~~G~----~~~~~l~~~i~~~ 136 (140)
T 1v98_A 98 ARYGVR------SVPTLVLF-RRGAPVATWVGA----SPRRVLEERLRPY 136 (140)
T ss_dssp HHTTCC------SSSEEEEE-ETTEEEEEEESC----CCHHHHHHHHHHH
T ss_pred HHCCCC------ccCEEEEE-eCCcEEEEEeCC----CCHHHHHHHHHHH
Confidence 899998 89999988 799999876543 3467777777655
No 174
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.06 E-value=7.9e-10 Score=82.09 Aligned_cols=87 Identities=16% Similarity=0.217 Sum_probs=68.1
Q ss_pred CCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhc--CcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHH
Q 024201 107 GKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKL--NTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSI 184 (271)
Q Consensus 107 gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~--gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~ 184 (271)
++ ++||.|| ++||++|+...|.+.++.+++... ++.++.|..+. +.++
T Consensus 21 ~~-~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~----------------------------~~~l 70 (111)
T 3uvt_A 21 EG-ITFIKFY-APWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTA----------------------------ERNI 70 (111)
T ss_dssp SS-EEEEEEE-CSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTT----------------------------CHHH
T ss_pred CC-cEEEEEE-CCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccc----------------------------cHhH
Confidence 45 8999999 899999999999999999887543 57777776643 2468
Q ss_pred HHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHH
Q 024201 185 SKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQA 234 (271)
Q Consensus 185 ~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~ 234 (271)
++.|++. .+|+++++ ++|+++..+.+. .+.+++.+.|+.
T Consensus 71 ~~~~~v~------~~Pt~~~~-~~g~~~~~~~g~----~~~~~l~~~l~~ 109 (111)
T 3uvt_A 71 CSKYSVR------GYPTLLLF-RGGKKVSEHSGG----RDLDSLHRFVLS 109 (111)
T ss_dssp HHHTTCC------SSSEEEEE-ETTEEEEEECSC----CSHHHHHHHHHH
T ss_pred HHhcCCC------cccEEEEE-eCCcEEEeccCC----cCHHHHHHHHHh
Confidence 8899998 89998888 799998876443 456777777653
No 175
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.05 E-value=5.1e-10 Score=84.97 Aligned_cols=92 Identities=12% Similarity=0.065 Sum_probs=70.6
Q ss_pred CcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHHH
Q 024201 108 KKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKS 187 (271)
Q Consensus 108 kk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ 187 (271)
++++||+|| ++||++|+...|.+.++++++.+ ++.++.|.++. +.++++.
T Consensus 21 ~~~~lv~f~-a~~C~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~----------------------------~~~~~~~ 70 (122)
T 3aps_A 21 KTHWVVDFY-APWCGPCQNFAPEFELLARMIKG-KVRAGKVDCQA----------------------------YPQTCQK 70 (122)
T ss_dssp SSCEEEEEE-CTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETTT----------------------------CHHHHHH
T ss_pred CCeEEEEEE-CCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEeCcC----------------------------CHHHHHH
Confidence 348999999 99999999999999999999875 68888887763 2368889
Q ss_pred hCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHHH
Q 024201 188 YGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQ 236 (271)
Q Consensus 188 ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l~ 236 (271)
|++. .+|++++++++|++. ...+......+.+++.+.|+.+.
T Consensus 71 ~~v~------~~Pt~~~~~~~~~~~-~~~g~~~~~~~~~~l~~~l~~~l 112 (122)
T 3aps_A 71 AGIK------AYPSVKLYQYERAKK-SIWEEQINSRDAKTIAALIYGKL 112 (122)
T ss_dssp TTCC------SSSEEEEEEEEGGGT-EEEEEEECCSCHHHHHHHHHHHH
T ss_pred cCCC------ccceEEEEeCCCccc-eeeccccCcCCHHHHHHHHHHHH
Confidence 9999 899999998888743 32222111246778888887653
No 176
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.03 E-value=1.1e-09 Score=92.65 Aligned_cols=88 Identities=14% Similarity=0.275 Sum_probs=71.3
Q ss_pred CcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHHH
Q 024201 108 KKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKS 187 (271)
Q Consensus 108 kk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ 187 (271)
++++||+|| ++||++|+...|.|.++++++++ .+.++.|.+|. +.++++.
T Consensus 30 ~k~vvv~F~-a~wC~~C~~~~p~l~~l~~~~~~-~v~~~~vd~d~----------------------------~~~l~~~ 79 (222)
T 3dxb_A 30 DGAILVDFW-AEWCGPCKMIAPILDEIADEYQG-KLTVAKLNIDQ----------------------------NPGTAPK 79 (222)
T ss_dssp SSCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTT----------------------------CTTTGGG
T ss_pred CCEEEEEEE-CCcCHHHHHHHHHHHHHHHHhcC-CcEEEEEECCC----------------------------CHHHHHH
Confidence 348999999 99999999999999999999975 38888888753 2345678
Q ss_pred hCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHHH
Q 024201 188 YGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQ 236 (271)
Q Consensus 188 ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l~ 236 (271)
|++. .+|+++|+ ++|+++....+. ...+++.+.|+.+.
T Consensus 80 ~~v~------~~Pt~~~~-~~G~~~~~~~G~----~~~~~l~~~l~~~l 117 (222)
T 3dxb_A 80 YGIR------GIPTLLLF-KNGEVAATKVGA----LSKGQLKEFLDANL 117 (222)
T ss_dssp GTCC------SBSEEEEE-ETTEEEEEEESC----CCHHHHHHHHHHHS
T ss_pred cCCC------cCCEEEEE-ECCeEEEEeccc----cChHHHHHHHHhhc
Confidence 9998 89998888 489999876543 45788888887664
No 177
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.02 E-value=2.3e-09 Score=84.10 Aligned_cols=87 Identities=15% Similarity=0.182 Sum_probs=71.2
Q ss_pred cEEEEEEecCCCC--CChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHH
Q 024201 109 KYVILFFYPLDFT--FVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISK 186 (271)
Q Consensus 109 k~vvL~F~~~t~C--p~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~ 186 (271)
+++||+|| ++|| ++|+...|-|.++.++|.+ .+.++-|.+|. +.+++.
T Consensus 34 ~~vlVdF~-A~wCr~gpCk~iaPvleela~e~~~-~v~~~KVdvDe----------------------------~~~la~ 83 (137)
T 2qsi_A 34 KIVVLFFR-GDAVRFPEAADLAVVLPELINAFPG-RLVAAEVAAEA----------------------------ERGLMA 83 (137)
T ss_dssp SEEEEEEC-CCTTTCTTHHHHHHHHHHHHHTSTT-TEEEEEECGGG----------------------------HHHHHH
T ss_pred CcEEEEEe-CCccCCCchhhHHhHHHHHHHHccC-CcEEEEEECCC----------------------------CHHHHH
Confidence 48999999 9999 9999999999999999864 47777776553 468999
Q ss_pred HhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHHH
Q 024201 187 SYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQ 236 (271)
Q Consensus 187 ~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l~ 236 (271)
.|||. .+|+.+|+ +||+++.+..+. ...+++.+.|+.+.
T Consensus 84 ~ygV~------siPTlilF-kdG~~v~~~vG~----~~k~~l~~~l~~~l 122 (137)
T 2qsi_A 84 RFGVA------VCPSLAVV-QPERTLGVIAKI----QDWSSYLAQIGAML 122 (137)
T ss_dssp HHTCC------SSSEEEEE-ECCEEEEEEESC----CCHHHHHHHHHHHH
T ss_pred HcCCc------cCCEEEEE-ECCEEEEEEeCC----CCHHHHHHHHHHHh
Confidence 99999 89999999 899999998654 34566777776554
No 178
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.02 E-value=2.1e-09 Score=82.49 Aligned_cols=90 Identities=8% Similarity=0.031 Sum_probs=67.9
Q ss_pred CCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHh----cCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCCh
Q 024201 107 GKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEK----LNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITK 182 (271)
Q Consensus 107 gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~----~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~ 182 (271)
++ ++||.|| ++||++|+...|.+.++.+++.. .++.++.|.++. +.
T Consensus 33 ~~-~vlv~F~-a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~----------------------------~~ 82 (127)
T 3h79_A 33 EK-DVFVLYY-VPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEK----------------------------YP 82 (127)
T ss_dssp TC-EEEEEEE-CTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTT----------------------------CH
T ss_pred CC-CEEEEEE-CCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccc----------------------------cH
Confidence 44 8999999 99999999999999999988863 246677676542 35
Q ss_pred HHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHH
Q 024201 183 SISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 183 ~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l 235 (271)
++++.|++. ..|+++++++.+++....+. -..+.+++++.|+.+
T Consensus 83 ~l~~~~~v~------~~Pt~~~~~~g~~~~~~~~~---G~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 83 DVIERMRVS------GFPTMRYYTRIDKQEPFEYS---GQRYLSLVDSFVFQN 126 (127)
T ss_dssp HHHHHTTCC------SSSEEEEECSSCSSSCEECC---SCCCHHHHHHHHHHH
T ss_pred hHHHhcCCc------cCCEEEEEeCCCCCCceEec---CCccHHHHHHHHHhc
Confidence 789999999 89999999877765312111 235788888877653
No 179
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.02 E-value=1.6e-09 Score=81.97 Aligned_cols=88 Identities=15% Similarity=0.155 Sum_probs=64.8
Q ss_pred CCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHH
Q 024201 107 GKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISK 186 (271)
Q Consensus 107 gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~ 186 (271)
|+ ++||+|| ++|||+|+...|.|.+++++++ ..++.|.++...+. +...++++
T Consensus 29 ~~-~~~v~f~-a~wC~~C~~~~p~l~~~~~~~~---~~v~~~~~~~~~~~----------------------~~~~~~~~ 81 (118)
T 1zma_A 29 KE-TATFFIG-RKTCPYCRKFAGTLSGVVAETK---AHIYFINSEEPSQL----------------------NDLQAFRS 81 (118)
T ss_dssp TC-CEEEEEE-CTTCHHHHHHHHHHHHHHHHHC---CCCEEEETTCGGGH----------------------HHHHHHHH
T ss_pred CC-eEEEEEE-CCCCccHHHHHHHHHHHHHhcC---CeEEEEECCCcCcH----------------------HHHHHHHH
Confidence 45 8999999 9999999999999999988764 45666776653211 11246788
Q ss_pred HhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHH
Q 024201 187 SYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTL 232 (271)
Q Consensus 187 ~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l 232 (271)
.||+. .+|+++++ ++|+++.+..+. ...+++.+.|
T Consensus 82 ~~~i~------~~Pt~~~~-~~G~~~~~~~G~----~~~~~l~~~l 116 (118)
T 1zma_A 82 RYGIP------TVPGFVHI-TDGQINVRCDSS----MSAQEIKDFA 116 (118)
T ss_dssp HHTCC------SSCEEEEE-ETTEEEEECCTT----CCHHHHHHHH
T ss_pred HcCCC------CCCeEEEE-ECCEEEEEecCC----CCHHHHHHHh
Confidence 99999 89999999 589998775432 3455665554
No 180
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.02 E-value=4.5e-10 Score=94.04 Aligned_cols=90 Identities=17% Similarity=0.181 Sum_probs=72.8
Q ss_pred ccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHH
Q 024201 105 YIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSI 184 (271)
Q Consensus 105 ~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~ 184 (271)
..|+ ++||.|| ++||++|....|.+.++++++++ .+.++.|.++. +.++
T Consensus 112 ~~~~-~vlv~F~-a~wC~~C~~~~p~~~~l~~~~~~-~v~~~~vd~~~----------------------------~~~l 160 (210)
T 3apq_A 112 NSGE-LWFVNFY-SPGCSHCHDLAPTWREFAKEVDG-LLRIGAVNCGD----------------------------DRML 160 (210)
T ss_dssp HHSC-CEEEEEE-CTTCHHHHHHHHHHHHHHHHTBT-TBEEEEEETTT----------------------------CHHH
T ss_pred ccCC-cEEEEEe-CCCChhHHHHHHHHHHHHHHhcC-ceEEEEEECCc----------------------------cHHH
Confidence 4566 8999999 99999999999999999999864 48888887653 2468
Q ss_pred HHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHHH
Q 024201 185 SKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQ 236 (271)
Q Consensus 185 ~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l~ 236 (271)
++.|++. .+|+++++ ++|+++....+ ..+.+++.+.|+.+.
T Consensus 161 ~~~~~v~------~~Pt~~~~-~~G~~~~~~~G----~~~~~~l~~~i~~~l 201 (210)
T 3apq_A 161 CRMKGVN------SYPSLFIF-RSGMAAVKYNG----DRSKESLVAFAMQHV 201 (210)
T ss_dssp HHHTTCC------SSSEEEEE-CTTSCCEECCS----CCCHHHHHHHHHHHH
T ss_pred HHHcCCC------cCCeEEEE-ECCCceeEecC----CCCHHHHHHHHHHhC
Confidence 8889998 89999999 99999877543 246788888887653
No 181
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.01 E-value=1.3e-09 Score=82.35 Aligned_cols=84 Identities=17% Similarity=0.309 Sum_probs=67.0
Q ss_pred cEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHHHh
Q 024201 109 KYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSY 188 (271)
Q Consensus 109 k~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~y 188 (271)
+++||+|| ++||+.|+...+.|.++.++++. ++.++.|..+. +.++++.|
T Consensus 31 ~~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~----------------------------~~~~~~~~ 80 (121)
T 2i1u_A 31 KPVLVDFW-ATWCGPCKMVAPVLEEIATERAT-DLTVAKLDVDT----------------------------NPETARNF 80 (121)
T ss_dssp SCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTT----------------------------CHHHHHHT
T ss_pred CcEEEEEE-CCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEECCC----------------------------CHHHHHhc
Confidence 48999999 89999999999999999998865 58888888753 24688899
Q ss_pred CCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHH
Q 024201 189 GVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQ 233 (271)
Q Consensus 189 gv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~ 233 (271)
++. .+|+++++ ++|+++....+. ...+++.+.|+
T Consensus 81 ~i~------~~Pt~~~~-~~g~~~~~~~G~----~~~~~l~~~l~ 114 (121)
T 2i1u_A 81 QVV------SIPTLILF-KDGQPVKRIVGA----KGKAALLRELS 114 (121)
T ss_dssp TCC------SSSEEEEE-ETTEEEEEEESC----CCHHHHHHHTC
T ss_pred CCC------cCCEEEEE-ECCEEEEEecCC----CCHHHHHHHHH
Confidence 998 89998888 599998876543 34556666554
No 182
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.97 E-value=1.9e-09 Score=84.04 Aligned_cols=86 Identities=19% Similarity=0.279 Sum_probs=66.6
Q ss_pred cEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHHHh
Q 024201 109 KYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSY 188 (271)
Q Consensus 109 k~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~y 188 (271)
+++||+|| ++||++|+...|.|.++++++. ++.++.|.++.. . +.|
T Consensus 31 ~~vvv~f~-a~wC~~C~~~~p~l~~la~~~~--~v~~~~vd~~~~-------------------~------------~~~ 76 (135)
T 2dbc_A 31 LWVVIHLY-RSSVPMCLVVNQHLSVLARKFP--ETKFVKAIVNSC-------------------I------------EHY 76 (135)
T ss_dssp CEEEEEEC-CTTCHHHHHHHHHHHHHHHHCS--SEEEEEECCSSS-------------------C------------SSC
T ss_pred CEEEEEEE-CCCChHHHHHHHHHHHHHHHCC--CcEEEEEEhhcC-------------------c------------ccC
Confidence 38999999 9999999999999999998874 688888877641 0 367
Q ss_pred CCccCCCCccceEEEEEcCCCcEEEEEeccCCCCC---CHHHHHHHHHHH
Q 024201 189 GVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGR---SVDETLRTLQAL 235 (271)
Q Consensus 189 gv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~---~~~e~l~~l~~l 235 (271)
++. .+|++++++ +|+++....+....+. ..+++.+.|+..
T Consensus 77 ~i~------~~Pt~~~~~-~G~~v~~~~G~~~~~~~~~~~~~l~~~l~~~ 119 (135)
T 2dbc_A 77 HDN------CLPTIFVYK-NGQIEGKFIGIIECGGINLKLEELEWKLSEV 119 (135)
T ss_dssp CSS------CCSEEEEES-SSSCSEEEESTTTTTCTTCCHHHHHHHHHHH
T ss_pred CCC------CCCEEEEEE-CCEEEEEEEeEEeeCCCcCCHHHHHHHHHHc
Confidence 888 899999985 9999998776543322 566666666654
No 183
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=98.97 E-value=1e-09 Score=86.32 Aligned_cols=88 Identities=10% Similarity=0.137 Sum_probs=70.2
Q ss_pred cEEEEEEecCCC--CCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHH
Q 024201 109 KYVILFFYPLDF--TFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISK 186 (271)
Q Consensus 109 k~vvL~F~~~t~--Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~ 186 (271)
+++||+|| +.| |++|+...|.|.++.++|.++.+.|+-|.+| .+.+++.
T Consensus 35 ~~vlVdF~-a~~crCgpCk~iaPvleela~e~~g~~v~~~KVdvD----------------------------e~~~lA~ 85 (140)
T 2qgv_A 35 PDGVVLLS-SDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLE----------------------------QSEAIGD 85 (140)
T ss_dssp SSEEEEEC-CCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCHH----------------------------HHHHHHH
T ss_pred CCEEEEEe-CCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEECC----------------------------CCHHHHH
Confidence 37888888 898 9999999999999999997533777766544 2368999
Q ss_pred HhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHHH
Q 024201 187 SYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQ 236 (271)
Q Consensus 187 ~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l~ 236 (271)
.|||. .+|+.+|+ +||+++.+..+. ...+++.+.|+.+.
T Consensus 86 ~ygV~------sIPTlilF-k~G~~v~~~~G~----~~k~~l~~~i~~~l 124 (140)
T 2qgv_A 86 RFGAF------RFPATLVF-TGGNYRGVLNGI----HPWAELINLMRGLV 124 (140)
T ss_dssp HHTCC------SSSEEEEE-ETTEEEEEEESC----CCHHHHHHHHHHHH
T ss_pred HcCCc------cCCEEEEE-ECCEEEEEEecC----CCHHHHHHHHHHHh
Confidence 99999 89999888 899999997653 34567777777553
No 184
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=98.94 E-value=3.3e-10 Score=85.13 Aligned_cols=89 Identities=16% Similarity=0.315 Sum_probs=66.7
Q ss_pred cCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcC--cEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChH
Q 024201 106 IGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLN--TEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKS 183 (271)
Q Consensus 106 ~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~g--v~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~ 183 (271)
.++ ++||+|| ++||+.|+...+.+.++++++++.+ +.++.|..+. +.+
T Consensus 23 ~~~-~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~----------------------------~~~ 72 (120)
T 1mek_A 23 AHK-YLLVEFY-APWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATE----------------------------ESD 72 (120)
T ss_dssp HCS-EEEEEEE-CSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTT----------------------------CCS
T ss_pred cCC-eEEEEEE-CCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCC----------------------------CHH
Confidence 355 8999999 8999999999999999999987643 5555555432 236
Q ss_pred HHHHhCCccCCCCccceEEEEEcCCCcEE--EEEeccCCCCCCHHHHHHHHHHH
Q 024201 184 ISKSYGVLIPDQGIALRGLFIIDKEGVIQ--HSTINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 184 ~~~~ygv~~~~~g~~~P~~~lID~~G~V~--~~~~~~~~~~~~~~e~l~~l~~l 235 (271)
+++.|++. .+|+++++ ++|+++ ....+ ....+++.+.|+.+
T Consensus 73 ~~~~~~v~------~~Pt~~~~-~~g~~~~~~~~~g----~~~~~~l~~~l~~~ 115 (120)
T 1mek_A 73 LAQQYGVR------GYPTIKFF-RNGDTASPKEYTA----GREADDIVNWLKKR 115 (120)
T ss_dssp SHHHHTCC------SSSEEEEE-ESSCSSSCEECCC----CSSHHHHHHHHHTT
T ss_pred HHHHCCCC------cccEEEEE-eCCCcCCcccccC----ccCHHHHHHHHHhc
Confidence 78899998 89999999 688866 54332 24567777777643
No 185
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.94 E-value=3.3e-09 Score=82.50 Aligned_cols=84 Identities=13% Similarity=0.120 Sum_probs=60.9
Q ss_pred cCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHH
Q 024201 106 IGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSIS 185 (271)
Q Consensus 106 ~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~ 185 (271)
+++ ++||+|| ++||++|+...|.|.++++++++.++.++.|.++.. .+++
T Consensus 25 ~~~-~vlv~f~-a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~~----------------------------~~~~ 74 (137)
T 2dj0_A 25 KRV-TWIVEFF-ANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGRY----------------------------TDVS 74 (137)
T ss_dssp TTS-CEEEEEC-CTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTTC----------------------------HHHH
T ss_pred CCC-EEEEEEE-CCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCccC----------------------------HHHH
Confidence 444 8999999 999999999999999999999866788888877642 2334
Q ss_pred HHhCCccCCCCccceEEEEEcCCCcEEEEEeccCC
Q 024201 186 KSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLA 220 (271)
Q Consensus 186 ~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~ 220 (271)
+.|++.....-..+|+++++ ++|+++....+...
T Consensus 75 ~~~~v~~~~~~~~~Pt~~~~-~~G~~~~~~~G~~~ 108 (137)
T 2dj0_A 75 TRYKVSTSPLTKQLPTLILF-QGGKEAMRRPQIDK 108 (137)
T ss_dssp HHTTCCCCSSSSCSSEEEEE-SSSSEEEEESCBCS
T ss_pred HHccCcccCCcCCCCEEEEE-ECCEEEEEecCcCc
Confidence 44444210000168999988 79999988765433
No 186
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=98.94 E-value=1.1e-09 Score=84.03 Aligned_cols=86 Identities=14% Similarity=0.300 Sum_probs=63.9
Q ss_pred CcEEEEEEecCCCCC--------------ChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcc
Q 024201 108 KKYVILFFYPLDFTF--------------VCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLK 173 (271)
Q Consensus 108 kk~vvL~F~~~t~Cp--------------~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~ 173 (271)
++++||.|| ++||+ +|+...|.+.++++++++ ++.++.|..|.
T Consensus 21 ~k~vlv~F~-a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~-~~~~~~vd~d~--------------------- 77 (123)
T 1oaz_A 21 DGAILVDFW-AEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQG-KLTVAKLNIDQ--------------------- 77 (123)
T ss_dssp SSEEEEEEE-CSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC--------CEEEEEETTS---------------------
T ss_pred CCeEEEEEE-CCCCccccccccccccCCCCcHHHHHHHHHHHHHhcC-CeEEEEEECCC---------------------
Confidence 348999999 99999 999999999999988875 48888887763
Q ss_pred cceEEcCChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHH
Q 024201 174 YPLIADITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQA 234 (271)
Q Consensus 174 f~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~ 234 (271)
+.++++.||+. .+|+++++ ++|+++....+. .+.+++.+.|+.
T Consensus 78 -------~~~l~~~~~v~------~~Pt~~~~-~~G~~~~~~~G~----~~~~~l~~~l~~ 120 (123)
T 1oaz_A 78 -------NPGTAPKYGIR------GIPTLLLF-KNGEVAATKVGA----LSKGQLKEFLDA 120 (123)
T ss_dssp -------CTTTGGGGTCC------BSSEEEEE-ESSSEEEEEESC----CCHHHHHHHHTT
T ss_pred -------CHHHHHHcCCC------ccCEEEEE-ECCEEEEEEeCC----CCHHHHHHHHHH
Confidence 23577889998 89999999 899999876543 346677776654
No 187
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=98.93 E-value=3.4e-10 Score=90.56 Aligned_cols=98 Identities=8% Similarity=0.044 Sum_probs=64.0
Q ss_pred ecccccCCcEEEEEEecCCCCCChHHHHHHHHHHH--HHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEE
Q 024201 101 KLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRY--TEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIA 178 (271)
Q Consensus 101 ~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~--~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~ 178 (271)
......|| +|||+|| ++||++|+...|.+.+.. .++. +..++.|.+|.. .
T Consensus 38 ~~A~~~~K-pVlV~F~-A~WC~~Ck~m~p~~~~~~~~~~~~--~~~fv~V~vD~e--------~---------------- 89 (151)
T 3ph9_A 38 FYAQKSKK-PLMVIHH-LEDCQYSQALKKVFAQNEEIQEMA--QNKFIMLNLMHE--------T---------------- 89 (151)
T ss_dssp HHHHHHTC-CEEEEEC-CTTCHHHHHHHHHHHHCHHHHHHH--HHTCEEEEESSC--------C----------------
T ss_pred HHHHHcCC-cEEEEEE-CCCCHhHHHHHHHHhcCHHHHHHh--hcCeEEEEecCC--------c----------------
Confidence 33344566 8999999 999999999999887642 2222 234566666520 0
Q ss_pred cCChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCC------CCCHHHHHHHHHHH
Q 024201 179 DITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAI------GRSVDETLRTLQAL 235 (271)
Q Consensus 179 D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~------~~~~~e~l~~l~~l 235 (271)
.+.+..|++. .+|+++++|++|+++....+.... ..+.+++++.++..
T Consensus 90 ---~~~~~~~~v~------~~PT~~f~~~~G~~v~~~~G~~~~~~~~~~~~~~~~ll~~~~~a 143 (151)
T 3ph9_A 90 ---TDKNLSPDGQ------YVPRIMFVDPSLTVRADIAGRYSNRLYTYEPRDLPLLIENMKKA 143 (151)
T ss_dssp ---SCGGGCTTCC------CSSEEEEECTTSCBCTTCCCSCTTSTTCCCGGGHHHHHHHHHHH
T ss_pred ---hhhHhhcCCC------CCCEEEEECCCCCEEEEEeCCcCCcccccchhhHHHHHHHHHHH
Confidence 0013346666 799999999999999986654111 13466777766644
No 188
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=98.92 E-value=3.7e-09 Score=89.48 Aligned_cols=89 Identities=12% Similarity=0.215 Sum_probs=70.0
Q ss_pred cCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcC--cEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChH
Q 024201 106 IGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLN--TEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKS 183 (271)
Q Consensus 106 ~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~g--v~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~ 183 (271)
+|+ ++||+|| ++||++|+...|.|.++++++++++ +.++.|..+. +.+
T Consensus 31 ~~~-~v~v~F~-a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~----------------------------~~~ 80 (241)
T 3idv_A 31 DKD-TVLLEFY-APWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATS----------------------------ASV 80 (241)
T ss_dssp TCS-EEEEEEE-CTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTT----------------------------CHH
T ss_pred cCC-eEEEEEE-CCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccC----------------------------CHH
Confidence 455 8999999 9999999999999999999998765 7777776642 357
Q ss_pred HHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHHH
Q 024201 184 ISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQ 236 (271)
Q Consensus 184 ~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l~ 236 (271)
+++.||+. .+|++++++ +|+++. +.+ ....+++.+.++.+.
T Consensus 81 l~~~~~v~------~~Pt~~~~~-~g~~~~-~~g----~~~~~~l~~~i~~~~ 121 (241)
T 3idv_A 81 LASRFDVS------GYPTIKILK-KGQAVD-YEG----SRTQEEIVAKVREVS 121 (241)
T ss_dssp HHHHTTCC------SSSEEEEEE-TTEEEE-CCS----CSCHHHHHHHHHHHH
T ss_pred HHHhcCCC------cCCEEEEEc-CCCccc-ccC----cccHHHHHHHHhhcc
Confidence 89999999 899999995 677663 222 356778887777653
No 189
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=98.91 E-value=2.2e-09 Score=81.24 Aligned_cols=87 Identities=11% Similarity=0.161 Sum_probs=64.6
Q ss_pred cCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHh----cCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCC
Q 024201 106 IGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEK----LNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADIT 181 (271)
Q Consensus 106 ~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~----~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~ 181 (271)
.++ ++||+|| ++||++|+...|.|.++++++++ .++.++.|..+. . .
T Consensus 24 ~~~-~vlv~f~-a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~------------------~-~-------- 74 (121)
T 2djj_A 24 DTK-DVLIEFY-APWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATA------------------N-D-------- 74 (121)
T ss_dssp TTS-CEEEEEE-CSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTT------------------S-C--------
T ss_pred CCC-CEEEEEE-CCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECcc------------------c-c--------
Confidence 455 8999999 99999999999999999999986 268888887753 0 1
Q ss_pred hHHHHHhCCccCCCCccceEEEEEcCCCcE-EEEEeccCCCCCCHHHHHHHHHHH
Q 024201 182 KSISKSYGVLIPDQGIALRGLFIIDKEGVI-QHSTINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 182 ~~~~~~ygv~~~~~g~~~P~~~lID~~G~V-~~~~~~~~~~~~~~~e~l~~l~~l 235 (271)
+++ ++. .+|++++++++|++ +..+.+ ..+.+++.+.|+.+
T Consensus 75 --~~~--~v~------~~Pt~~~~~~~~~~~~~~~~G----~~~~~~l~~~i~~~ 115 (121)
T 2djj_A 75 --VPD--EIQ------GFPTIKLYPAGAKGQPVTYSG----SRTVEDLIKFIAEN 115 (121)
T ss_dssp --CSS--CCS------SSSEEEEECSSCTTSCCCCCC----CSCHHHHHHHHHHT
T ss_pred --ccc--ccC------cCCeEEEEeCcCCCCceEecC----CCCHHHHHHHHHhc
Confidence 111 677 89999999988884 333322 24577777777654
No 190
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=98.91 E-value=1.8e-09 Score=82.60 Aligned_cols=80 Identities=13% Similarity=0.160 Sum_probs=63.0
Q ss_pred ccccCCcEEEEEEecCC-------CCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccc
Q 024201 103 SDYIGKKYVILFFYPLD-------FTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYP 175 (271)
Q Consensus 103 sd~~gkk~vvL~F~~~t-------~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~ 175 (271)
.+..|+ ++||+|| ++ |||+|+...|.|.++++++++ ++.++.|.++... .|.
T Consensus 20 ~~~~~~-~v~v~F~-a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~-~~~~~~vd~~~~~---~~~--------------- 78 (123)
T 1wou_A 20 EQHNGK-TIFAYFT-GSKDAGGKSWCPDCVQAEPVVREGLKHISE-GCVFIYCQVGEKP---YWK--------------- 78 (123)
T ss_dssp HTTTTS-EEEEEEE-CCBCTTCCBSCHHHHHHHHHHHHHGGGCCT-TEEEEEEECCCHH---HHH---------------
T ss_pred HHhCCC-EEEEEEE-ccCCCCCCCcCHHHHHhhHHHHHHHHHcCC-CcEEEEEECCCch---hhh---------------
Confidence 333466 8999999 89 999999999999999988764 7999999987632 221
Q ss_pred eEEcCChHHHHHhCCccCCCCccceEEEEEcCCCcEE
Q 024201 176 LIADITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQ 212 (271)
Q Consensus 176 ~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~ 212 (271)
|.+.++++.|++. .+|+++++++.+++.
T Consensus 79 ---d~~~~~~~~~~i~------~~Pt~~~~~~~~~~~ 106 (123)
T 1wou_A 79 ---DPNNDFRKNLKVT------AVPTLLKYGTPQKLV 106 (123)
T ss_dssp ---CTTCHHHHHHCCC------SSSEEEETTSSCEEE
T ss_pred ---chhHHHHHHCCCC------eeCEEEEEcCCceEe
Confidence 3456789999999 899999998744443
No 191
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=98.90 E-value=3.5e-09 Score=74.79 Aligned_cols=80 Identities=19% Similarity=0.334 Sum_probs=60.6
Q ss_pred EEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHHHhC
Q 024201 110 YVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYG 189 (271)
Q Consensus 110 ~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~yg 189 (271)
.+|++|| ++|||+|+...|.|.++.+++.+ ++.++.|..|. +.++++.||
T Consensus 3 ~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~~----------------------------~~~~~~~~~ 52 (85)
T 1nho_A 3 VNIEVFT-SPTCPYCPMAIEVVDEAKKEFGD-KIDVEKIDIMV----------------------------DREKAIEYG 52 (85)
T ss_dssp CCEEEES-CSSSCCSTTHHHHHHHHHHHHCS-SCCEEEECTTT----------------------------CGGGGGGTC
T ss_pred EEEEEEE-CCCCcchHHHHHHHHHHHHHhcC-CeEEEEEECCC----------------------------CHHHHHhCC
Confidence 3678899 89999999999999999998864 68888887752 235778899
Q ss_pred CccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHH
Q 024201 190 VLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQA 234 (271)
Q Consensus 190 v~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~ 234 (271)
+. .+|++++ ||++ ...+. .+.+++.+.|+.
T Consensus 53 v~------~~Pt~~~---~G~~--~~~G~----~~~~~l~~~l~~ 82 (85)
T 1nho_A 53 LM------AVPAIAI---NGVV--RFVGA----PSREELFEAIND 82 (85)
T ss_dssp SS------CSSEEEE---TTTE--EEECS----SCCHHHHHHHHH
T ss_pred ce------eeCEEEE---CCEE--EEccC----CCHHHHHHHHHH
Confidence 98 8999888 8998 33332 244666666654
No 192
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=98.43 E-value=1.5e-10 Score=85.08 Aligned_cols=73 Identities=18% Similarity=0.377 Sum_probs=58.4
Q ss_pred CcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHHH
Q 024201 108 KKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKS 187 (271)
Q Consensus 108 kk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ 187 (271)
++++||+|| ++|||.|....+.+.++.+++++ ++.++.|..|. +.++++.
T Consensus 19 ~~~~~v~f~-~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~----------------------------~~~~~~~ 68 (106)
T 2yj7_A 19 DKPVLVDFW-APWCGPCRMIAPIIEELAKEYEG-KVKVVKVNVDE----------------------------NPNTAAQ 68 (106)
Confidence 348999999 89999999999999999988874 46776665532 2356788
Q ss_pred hCCccCCCCccceEEEEEcCCCcEEEEEec
Q 024201 188 YGVLIPDQGIALRGLFIIDKEGVIQHSTIN 217 (271)
Q Consensus 188 ygv~~~~~g~~~P~~~lID~~G~V~~~~~~ 217 (271)
||+. ..|+++++ ++|+++..+.+
T Consensus 69 ~~v~------~~Pt~~~~-~~g~~~~~~~g 91 (106)
T 2yj7_A 69 YGIR------SIPTLLLF-KNGQVVDRLVG 91 (106)
Confidence 8988 89999999 89999887544
No 193
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=98.89 E-value=5e-09 Score=99.61 Aligned_cols=94 Identities=5% Similarity=0.047 Sum_probs=76.0
Q ss_pred cCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHh--cCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChH
Q 024201 106 IGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEK--LNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKS 183 (271)
Q Consensus 106 ~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~--~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~ 183 (271)
.+++++||+|| ++||++|+.+.|.+.++++++++ .++.++.|.++. |.+.+
T Consensus 28 ~~~k~vlV~Fy-A~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~--------------------------d~~~~ 80 (519)
T 3t58_A 28 GSSSAWAVEFF-ASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAE--------------------------ETNSA 80 (519)
T ss_dssp SCSSEEEEEEE-CTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTS--------------------------GGGHH
T ss_pred hCCCeEEEEEE-CCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCc--------------------------cccHH
Confidence 33349999999 99999999999999999999986 368888898864 22468
Q ss_pred HHHHhCCccCCCCccceEEEEEcC---CCcEEEEEeccCCCCCCHHHHHHHHHHHH
Q 024201 184 ISKSYGVLIPDQGIALRGLFIIDK---EGVIQHSTINNLAIGRSVDETLRTLQALQ 236 (271)
Q Consensus 184 ~~~~ygv~~~~~g~~~P~~~lID~---~G~V~~~~~~~~~~~~~~~e~l~~l~~l~ 236 (271)
+++.|||. .+|+++++++ +|+++....+ +.+.+++.+.|+.+.
T Consensus 81 l~~~~~V~------~~PTl~~f~~g~~~G~~~~~~~g----~~~~~~L~~~l~~~l 126 (519)
T 3t58_A 81 VCREFNIA------GFPTVRFFQAFTKNGSGATLPGA----GANVQTLRMRLIDAL 126 (519)
T ss_dssp HHHHTTCC------SBSEEEEECTTCCSCCCEEECCS----SCCHHHHHHHHHHHH
T ss_pred HHHHcCCc------ccCEEEEEcCcccCCCceeEecC----CCCHHHHHHHHHHHH
Confidence 99999999 8999999997 7876666433 257888888887653
No 194
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=98.88 E-value=2.3e-08 Score=83.94 Aligned_cols=86 Identities=17% Similarity=0.051 Sum_probs=67.2
Q ss_pred EEEEEEecCCCCCChHHHHHHHHHHHHHHHh---cCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHH
Q 024201 110 YVILFFYPLDFTFVCPTEITAFSDRYTEFEK---LNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISK 186 (271)
Q Consensus 110 ~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~---~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~ 186 (271)
.+||.|| ++||++|+...|.+.++++++.+ .++.++.|..+. +.++++
T Consensus 136 ~~~v~F~-a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~~----------------------------~~~l~~ 186 (226)
T 1a8l_A 136 VRILVFV-TPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIE----------------------------YPEWAD 186 (226)
T ss_dssp EEEEEEE-CSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGGG----------------------------CHHHHH
T ss_pred cEEEEEe-CCCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEccc----------------------------CHHHHH
Confidence 4499999 99999999999999999999874 368888776542 356888
Q ss_pred HhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHH
Q 024201 187 SYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 187 ~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l 235 (271)
.||+. .+|+++++ ++|+++..+.+. ...+++.+.|+.+
T Consensus 187 ~~~v~------~~Pt~~~~-~~G~~~~~~~G~----~~~~~l~~~l~~~ 224 (226)
T 1a8l_A 187 QYNVM------AVPKIVIQ-VNGEDRVEFEGA----YPEKMFLEKLLSA 224 (226)
T ss_dssp HTTCC------SSCEEEEE-ETTEEEEEEESC----CCHHHHHHHHHHH
T ss_pred hCCCc------ccCeEEEE-eCCceeEEEcCC----CCHHHHHHHHHHh
Confidence 99999 89997766 699988876543 3456777777654
No 195
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=98.87 E-value=3.8e-09 Score=74.66 Aligned_cols=80 Identities=15% Similarity=0.253 Sum_probs=60.4
Q ss_pred EEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHHHhC
Q 024201 110 YVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYG 189 (271)
Q Consensus 110 ~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~yg 189 (271)
++|++|| ++|||+|+...|.|.++++++. .++.++.|..|. +.++++.||
T Consensus 4 ~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~-~~~~~~~vd~~~----------------------------~~~~~~~~~ 53 (85)
T 1fo5_A 4 VKIELFT-SPMCPHCPAAKRVVEEVANEMP-DAVEVEYINVME----------------------------NPQKAMEYG 53 (85)
T ss_dssp EEEEEEE-CCCSSCCCTHHHHHHHHHHHCS-SSEEEEEEESSS----------------------------SCCTTTSTT
T ss_pred eEEEEEe-CCCCCchHHHHHHHHHHHHHcC-CceEEEEEECCC----------------------------CHHHHHHCC
Confidence 6789999 8999999999999999998886 368888888763 124567788
Q ss_pred CccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHH
Q 024201 190 VLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQA 234 (271)
Q Consensus 190 v~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~ 234 (271)
+. .+|++++ ||++ ...+. .+.+++.+.|+.
T Consensus 54 v~------~~Pt~~~---~G~~--~~~G~----~~~~~l~~~l~~ 83 (85)
T 1fo5_A 54 IM------AVPTIVI---NGDV--EFIGA----PTKEALVEAIKK 83 (85)
T ss_dssp TC------CSSEEEE---TTEE--ECCSS----SSSHHHHHHHHH
T ss_pred Cc------ccCEEEE---CCEE--eeecC----CCHHHHHHHHHH
Confidence 88 8899888 8988 32221 245666666654
No 196
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=98.87 E-value=1e-08 Score=87.61 Aligned_cols=93 Identities=5% Similarity=0.074 Sum_probs=70.6
Q ss_pred cEEEEEEecCCCCCChHHHHHHHHHHHHHHHh--cCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHH
Q 024201 109 KYVILFFYPLDFTFVCPTEITAFSDRYTEFEK--LNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISK 186 (271)
Q Consensus 109 k~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~--~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~ 186 (271)
+++||.|| ++||++|+...|.+.++++++++ .++.++.|.++. |.+.++++
T Consensus 31 ~~vlv~F~-a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~--------------------------~~~~~l~~ 83 (244)
T 3q6o_A 31 SAWAVEFF-ASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAE--------------------------ETNSAVCR 83 (244)
T ss_dssp SEEEEEEE-CTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTS--------------------------TTTHHHHH
T ss_pred CeEEEEEE-CCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCc--------------------------hhhHHHHH
Confidence 48999999 99999999999999999999986 468898888753 13468999
Q ss_pred HhCCccCCCCccceEEEEEcCCCcEE-EEEeccCCCCCCHHHHHHHHHHHH
Q 024201 187 SYGVLIPDQGIALRGLFIIDKEGVIQ-HSTINNLAIGRSVDETLRTLQALQ 236 (271)
Q Consensus 187 ~ygv~~~~~g~~~P~~~lID~~G~V~-~~~~~~~~~~~~~~e~l~~l~~l~ 236 (271)
.|++. .+|++++++..+++- ...+. ..+.+.+++.+.|..+.
T Consensus 84 ~~~v~------~~Pt~~~~~~g~~~~~g~~~~--~~g~~~~~l~~~i~~~l 126 (244)
T 3q6o_A 84 DFNIP------GFPTVRFFXAFTXNGSGAVFP--VAGADVQTLRERLIDAL 126 (244)
T ss_dssp HTTCC------SSSEEEEECTTCCSSSCEECC--CTTCCHHHHHHHHHHHH
T ss_pred HcCCC------ccCEEEEEeCCCcCCCCeeEe--cCCCCHHHHHHHHHHHH
Confidence 99999 899999998633311 11111 12357888888887653
No 197
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=98.86 E-value=2e-08 Score=82.03 Aligned_cols=107 Identities=7% Similarity=-0.091 Sum_probs=67.9
Q ss_pred eEecccccCCcEEEEEEecCCCCCChHHHHHH---HHHHHHHHHhcCcEEEEEeCCCHHHHH-HHHHHhhhcCCCCCccc
Q 024201 99 NVKLSDYIGKKYVILFFYPLDFTFVCPTEITA---FSDRYTEFEKLNTEILGVSTDSVFSHL-AWVQTDRKSGGLGDLKY 174 (271)
Q Consensus 99 ~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~---L~~~~~~~~~~gv~vv~VS~d~~~~~~-~~~~~~~~~~~~~~~~f 174 (271)
.+......|| +|||.|| ++||++|+...+. ..++.+.+.+ ++.+|-|..|...+.. .+.+
T Consensus 31 a~~~A~~~~K-pVlvdF~-A~WC~~Ck~m~~~~f~~~~va~~l~~-~fv~ikVD~de~~~l~~~y~~------------- 94 (173)
T 3ira_A 31 AFEKARKENK-PVFLSIG-YSTCHWCHMMAHESFEDEEVAGLMNE-AFVSIKVDREERPDIDNIYMT------------- 94 (173)
T ss_dssp HHHHHHHHTC-CEEEEEE-CTTCHHHHHHHHHTTTCHHHHHHHHH-HCEEEEEETTTCHHHHHHHHH-------------
T ss_pred HHHHHHHhCC-CEEEecc-cchhHhhccccccccCCHHHHHHHHh-cCceeeeCCcccCcHHHHHHH-------------
Confidence 4555566777 9999999 9999999987763 2344555543 5677777666432221 1111
Q ss_pred ceEEcCChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEec-cCC---CCCCHHHHHHHHHHH
Q 024201 175 PLIADITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTIN-NLA---IGRSVDETLRTLQAL 235 (271)
Q Consensus 175 ~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~-~~~---~~~~~~e~l~~l~~l 235 (271)
.+...+|+. .+|+++++|++|++++...+ +.. ......++|+.+..+
T Consensus 95 --------~~q~~~gv~------g~Pt~v~l~~dG~~v~~~ty~p~~~~~~~~~f~~~L~~v~~~ 145 (173)
T 3ira_A 95 --------VCQIILGRG------GWPLNIIMTPGKKPFFAGTYIPKNTRFNQIGMLELVPRIKEI 145 (173)
T ss_dssp --------HHHHHHSCC------CSSEEEEECTTSCEEEEESSCCSSCBTTBCCHHHHHHHHHHH
T ss_pred --------HHHHHcCCC------CCcceeeECCCCCceeeeeeCCCCcCCCCCCHHHHHHHHHHH
Confidence 122336888 89999999999999987322 111 113566677666543
No 198
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=98.82 E-value=4.7e-08 Score=83.85 Aligned_cols=89 Identities=16% Similarity=0.101 Sum_probs=68.6
Q ss_pred cccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHh---cCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcC
Q 024201 104 DYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEK---LNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADI 180 (271)
Q Consensus 104 d~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~---~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~ 180 (271)
++.|+ ++|++|| ++|||+|+...|.+.+++.+++. .++.+..|..+.
T Consensus 135 ~~~~~-~~vv~F~-a~wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~~---------------------------- 184 (243)
T 2hls_A 135 SLKGR-VHIETII-TPSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEAYE---------------------------- 184 (243)
T ss_dssp HCCSC-EEEEEEE-CSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEETTT----------------------------
T ss_pred HcCCC-cEEEEEE-CCCCCCcHHHHHHHHHHHHHcccccCCcEEEEEEECcc----------------------------
Confidence 45666 7888999 99999999999999999999852 467777775542
Q ss_pred ChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHHHH
Q 024201 181 TKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQY 237 (271)
Q Consensus 181 ~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l~~ 237 (271)
+.++++.|++. .+|+++| ||++++. + ....+++++.|+....
T Consensus 185 ~~~~~~~~~V~------~vPt~~i---~G~~~~~--G----~~~~~~l~~~l~~~~~ 226 (243)
T 2hls_A 185 NPDIADKYGVM------SVPSIAI---NGYLVFV--G----VPYEEDFLDYVKSAAE 226 (243)
T ss_dssp CHHHHHHTTCC------SSSEEEE---TTEEEEE--S----CCCHHHHHHHHHHHHT
T ss_pred CHHHHHHcCCe------eeCeEEE---CCEEEEe--C----CCCHHHHHHHHHHHhh
Confidence 34688899999 8999888 7987632 2 2467888888886643
No 199
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=98.82 E-value=6.8e-10 Score=85.05 Aligned_cols=86 Identities=23% Similarity=0.357 Sum_probs=65.5
Q ss_pred cCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHH
Q 024201 106 IGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSIS 185 (271)
Q Consensus 106 ~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~ 185 (271)
.++ ++||+|| ++||+.|+...+.|.++.++++ ++.++.|.+|. +.++.
T Consensus 35 ~~~-~~vv~f~-~~~C~~C~~~~~~l~~~~~~~~--~v~~~~v~~~~----------------------------~~~~~ 82 (130)
T 1wmj_A 35 AGK-VVIIDFT-ASWCGPCRFIAPVFAEYAKKFP--GAVFLKVDVDE----------------------------LKEVA 82 (130)
T ss_dssp TTC-BCBEECC-SSSCSCSSSSHHHHHHHHHHCT--TBCCEECCTTT----------------------------SGGGH
T ss_pred cCC-EEEEEEE-CCCChhHHHHHHHHHHHHHHCC--CCEEEEEeccc----------------------------hHHHH
Confidence 466 8999999 8999999999999999998886 68888776642 34678
Q ss_pred HHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHH
Q 024201 186 KSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 186 ~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l 235 (271)
+.|++. .+|+++++ ++|+++....+ .+.+++.+.|+.+
T Consensus 83 ~~~~v~------~~Pt~~~~-~~g~~~~~~~g-----~~~~~l~~~l~~~ 120 (130)
T 1wmj_A 83 EKYNVE------AMPTFLFI-KDGAEADKVVG-----ARKDDLQNTIVKH 120 (130)
T ss_dssp HHHTCC------SSCCCCBC-TTTTCCBCCCT-----TCTTTHHHHHHHH
T ss_pred HHcCCC------ccceEEEE-eCCeEEEEEeC-----CCHHHHHHHHHHH
Confidence 899998 88987666 89998876543 1234555555544
No 200
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=98.81 E-value=4.1e-09 Score=83.25 Aligned_cols=85 Identities=11% Similarity=0.185 Sum_probs=59.2
Q ss_pred EEEEEEecCCC--CCChHHHHHHHHHHHHHHHhcCcE--EEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHH
Q 024201 110 YVILFFYPLDF--TFVCPTEITAFSDRYTEFEKLNTE--ILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSIS 185 (271)
Q Consensus 110 ~vvL~F~~~t~--Cp~C~~~l~~L~~~~~~~~~~gv~--vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~ 185 (271)
.+||+|| +.| |++|+...|.|.++++++ + ++. ++.|.+|. +.+++
T Consensus 36 ~~vv~f~-~~~~~C~~C~~l~P~l~~la~~~-~-~v~~~~~~Vd~d~----------------------------~~~la 84 (142)
T 2es7_A 36 DGVILLS-SDPRRTPEVSDNPVMIAELLREF-P-QFDWQVAVADLEQ----------------------------SEAIG 84 (142)
T ss_dssp SEEEEEC-CCSCC----CCHHHHHHHHHHTC-T-TSCCEEEEECHHH----------------------------HHHHH
T ss_pred CEEEEEE-CCCCCCccHHHHHHHHHHHHHHh-c-ccceeEEEEECCC----------------------------CHHHH
Confidence 4777777 666 999999999999999998 3 577 77776542 24688
Q ss_pred HHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHHH
Q 024201 186 KSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQ 236 (271)
Q Consensus 186 ~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l~ 236 (271)
+.|||. .+|+++++ ++|+++.+..+. .+.+++.+.|+.+.
T Consensus 85 ~~~~V~------~iPT~~~f-k~G~~v~~~~G~----~~~~~l~~~i~~~l 124 (142)
T 2es7_A 85 DRFNVR------RFPATLVF-TDGKLRGALSGI----HPWAELLTLMRSIV 124 (142)
T ss_dssp HTTTCC------SSSEEEEE-SCC----CEESC----CCHHHHHHHHHHHH
T ss_pred HhcCCC------cCCeEEEE-eCCEEEEEEeCC----CCHHHHHHHHHHHh
Confidence 899999 89999999 899999886543 34677777777653
No 201
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=98.74 E-value=6.2e-08 Score=67.14 Aligned_cols=62 Identities=16% Similarity=0.164 Sum_probs=49.8
Q ss_pred EEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHHHhCC
Q 024201 111 VILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGV 190 (271)
Q Consensus 111 vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ygv 190 (271)
+.|.|| ++||++|+...|.+.++.+++.. ++.++.|. +.++++.||+
T Consensus 2 ~~v~f~-a~wC~~C~~~~~~l~~~~~~~~~-~~~~~~v~-------------------------------~~~~~~~~~v 48 (77)
T 1ilo_A 2 MKIQIY-GTGCANCQMLEKNAREAVKELGI-DAEFEKIK-------------------------------EMDQILEAGL 48 (77)
T ss_dssp EEEEEE-CSSSSTTHHHHHHHHHHHHHTTC-CEEEEEEC-------------------------------SHHHHHHHTC
T ss_pred cEEEEE-cCCChhHHHHHHHHHHHHHHcCC-ceEEEEec-------------------------------CHHHHHHCCC
Confidence 358899 89999999999999999888753 46666553 3467888999
Q ss_pred ccCCCCccceEEEEEcCCCcEEEE
Q 024201 191 LIPDQGIALRGLFIIDKEGVIQHS 214 (271)
Q Consensus 191 ~~~~~g~~~P~~~lID~~G~V~~~ 214 (271)
. .+|++++ ||+++..
T Consensus 49 ~------~~Pt~~~---~G~~~~~ 63 (77)
T 1ilo_A 49 T------ALPGLAV---DGELKIM 63 (77)
T ss_dssp S------SSSCEEE---TTEEEEC
T ss_pred C------cCCEEEE---CCEEEEc
Confidence 8 8999887 8998765
No 202
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=98.74 E-value=1e-08 Score=88.33 Aligned_cols=91 Identities=11% Similarity=0.096 Sum_probs=68.0
Q ss_pred CCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHH
Q 024201 107 GKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISK 186 (271)
Q Consensus 107 gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~ 186 (271)
|+ +|||+|| ++||++|+...|.|.+++.+|. ++.|+.|.++. . .+++
T Consensus 133 ~k-~VvV~Fy-a~wC~~Ck~l~p~l~~La~~~~--~v~f~kVd~d~----------~-------------------~l~~ 179 (245)
T 1a0r_P 133 IT-TIVVHIY-EDGIKGCDALNSSLICLAAEYP--MVKFCKIKASN----------T-------------------GAGD 179 (245)
T ss_dssp TC-EEEEEEE-CTTSTTHHHHHHHHHHHHHHCT--TSEEEEEEHHH----------H-------------------CCTT
T ss_pred CC-EEEEEEE-CCCChHHHHHHHHHHHHHHHCC--CCEEEEEeCCc----------H-------------------HHHH
Confidence 55 8999999 9999999999999999999986 58888886531 1 1234
Q ss_pred HhCCccCCCCccceEEEEEcCCCcEEEEEeccCCC-C--CCHHHHHHHHHHHHH
Q 024201 187 SYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAI-G--RSVDETLRTLQALQY 237 (271)
Q Consensus 187 ~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~-~--~~~~e~l~~l~~l~~ 237 (271)
.|++. .+|+++|+ ++|+++...++.... + ...+++.+.|.....
T Consensus 180 ~~~I~------~~PTll~~-~~G~~v~~~vG~~~~~g~~~~~e~Le~~L~~~g~ 226 (245)
T 1a0r_P 180 RFSSD------VLPTLLVY-KGGELLSNFISVTEQLAEEFFTGDVESFLNEYGL 226 (245)
T ss_dssp SSCTT------TCSEEEEE-ETTEEEEEETTGGGGSCTTCCHHHHHHHHHTTTC
T ss_pred HCCCC------CCCEEEEE-ECCEEEEEEeCCcccccccccHHHHHHHHHHcCC
Confidence 67888 89998888 599999987764332 2 345666666665443
No 203
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=98.73 E-value=2e-08 Score=75.88 Aligned_cols=75 Identities=15% Similarity=0.124 Sum_probs=60.9
Q ss_pred CcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHHH
Q 024201 108 KKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKS 187 (271)
Q Consensus 108 kk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ 187 (271)
.+++||+|+ ++|||+|+...|.|.++.++ .++.++-|.+|... |...+++..
T Consensus 24 ~~~vvi~kh-atwCgpc~~~~~~~e~~~~~---~~v~~~~vdVde~r------------------------~~Sn~IA~~ 75 (112)
T 3iv4_A 24 NKYVFVLKH-SETCPISANAYDQFNKFLYE---RDMDGYYLIVQQER------------------------DLSDYIAKK 75 (112)
T ss_dssp CSEEEEEEE-CTTCHHHHHHHHHHHHHHHH---HTCCEEEEEGGGGH------------------------HHHHHHHHH
T ss_pred CCCEEEEEE-CCcCHhHHHHHHHHHHHhcc---CCceEEEEEeecCc------------------------hhhHHHHHH
Confidence 348999999 99999999999999998874 36888888776311 123579999
Q ss_pred hCCccCCCCcc-ceEEEEEcCCCcEEEEEec
Q 024201 188 YGVLIPDQGIA-LRGLFIIDKEGVIQHSTIN 217 (271)
Q Consensus 188 ygv~~~~~g~~-~P~~~lID~~G~V~~~~~~ 217 (271)
|||. + .|+++|+ +||++++....
T Consensus 76 ~~V~------h~sPq~il~-k~G~~v~~~SH 99 (112)
T 3iv4_A 76 TNVK------HESPQAFYF-VNGEMVWNRDH 99 (112)
T ss_dssp HTCC------CCSSEEEEE-ETTEEEEEEEG
T ss_pred hCCc------cCCCeEEEE-ECCEEEEEeec
Confidence 9999 6 8999999 89999999643
No 204
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=98.72 E-value=5.6e-08 Score=85.95 Aligned_cols=92 Identities=14% Similarity=0.188 Sum_probs=68.4
Q ss_pred cEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHHHh
Q 024201 109 KYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSY 188 (271)
Q Consensus 109 k~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~y 188 (271)
+++||.|| ++||++|+...|.+.++++++++ .+.++.|.+|. +.+.++++.|
T Consensus 36 ~~vlV~F~-A~wC~~C~~~~p~~~~la~~~~~-~~~~~~v~~d~--------------------------~~~~~l~~~~ 87 (298)
T 3ed3_A 36 YTSLVEFY-APWCGHCKKLSSTFRKAAKRLDG-VVQVAAVNCDL--------------------------NKNKALCAKY 87 (298)
T ss_dssp SCEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTS--------------------------TTTHHHHHHT
T ss_pred CeEEEEEE-CCCCHHHHHHHHHHHHHHHHccC-CcEEEEEEccC--------------------------ccCHHHHHhC
Confidence 48999999 99999999999999999999975 38899998873 1247899999
Q ss_pred CCccCCCCccceEEEEEcCCCcEEEEEe-------------ccCCCCCCHHHHHHHHHHH
Q 024201 189 GVLIPDQGIALRGLFIIDKEGVIQHSTI-------------NNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 189 gv~~~~~g~~~P~~~lID~~G~V~~~~~-------------~~~~~~~~~~e~l~~l~~l 235 (271)
|+. .+|++++++. |+++.... ....-.+..+++++.+...
T Consensus 88 ~I~------~~Pt~~~~~~-g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~~ 140 (298)
T 3ed3_A 88 DVN------GFPTLMVFRP-PKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSR 140 (298)
T ss_dssp TCC------BSSEEEEEEC-CCC-------------CCCEEEECCSCCSHHHHHHHHHTT
T ss_pred CCC------ccceEEEEEC-CceeecccccccccccccccceeecCCcCHHHHHHHHHHh
Confidence 999 8999999975 55321111 1112246788888877543
No 205
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=98.68 E-value=6.9e-08 Score=73.77 Aligned_cols=83 Identities=22% Similarity=0.279 Sum_probs=64.7
Q ss_pred EEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHHHhC
Q 024201 110 YVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYG 189 (271)
Q Consensus 110 ~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~yg 189 (271)
++||+|| ++||++|+...|.|.++.+++. ++.++-|.+|. . ++.|+
T Consensus 25 ~vvv~F~-a~wc~~C~~~~p~l~~la~~~~--~v~f~kvd~d~------------------~-------------~~~~~ 70 (118)
T 3evi_A 25 WVIIHLY-RSSIPMCLLVNQHLSLLARKFP--ETKFVKAIVNS------------------C-------------IQHYH 70 (118)
T ss_dssp EEEEEEE-CTTSHHHHHHHHHHHHHHHHCT--TSEEEEEEGGG------------------T-------------STTCC
T ss_pred eEEEEEe-CCCChHHHHHHHHHHHHHHHCC--CCEEEEEEhHH------------------h-------------HHHCC
Confidence 8999999 9999999999999999999986 58888887653 0 24578
Q ss_pred CccCCCCccceEEEEEcCCCcEEEEEeccCCCC---CCHHHHHHHHH
Q 024201 190 VLIPDQGIALRGLFIIDKEGVIQHSTINNLAIG---RSVDETLRTLQ 233 (271)
Q Consensus 190 v~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~---~~~~e~l~~l~ 233 (271)
+. .+|+++++ +||+++....+....+ -..+++...|.
T Consensus 71 v~------~~PT~~~f-k~G~~v~~~~G~~~~gg~~~~~~~le~~L~ 110 (118)
T 3evi_A 71 DN------CLPTIFVY-KNGQIEAKFIGIIECGGINLKLEELEWKLA 110 (118)
T ss_dssp GG------GCSEEEEE-ETTEEEEEEESTTTTTCSSCCHHHHHHHHH
T ss_pred CC------CCCEEEEE-ECCEEEEEEeChhhhCCCCCCHHHHHHHHH
Confidence 88 89998888 7999999988754433 24455555543
No 206
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=98.66 E-value=2.3e-09 Score=80.43 Aligned_cols=88 Identities=11% Similarity=0.124 Sum_probs=60.5
Q ss_pred eeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceE
Q 024201 98 INVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLI 177 (271)
Q Consensus 98 ~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l 177 (271)
..+.|+++.|+ .+||.|| ++|||+|+...|.|.++.++++ .|-+..|. .
T Consensus 3 ~~~~la~~~~k-~~vV~F~-A~WC~~C~~~~p~~~~~a~~~~-----~v~~~~~~-------------------~----- 51 (106)
T 3kp8_A 3 LAVGLAAHLRQ-IGGTMYG-AYWCPHCQDQKELFGAAFDQVP-----YVECSPNG-------------------P----- 51 (106)
T ss_dssp HHHHHHHHHHH-HTCEEEE-CTTCHHHHHHHHHHGGGGGGSC-----EEESCTTC-------------------T-----
T ss_pred HhhHHHHhcCC-CEEEEEE-CCCCHHHHHHHHHHHHHHHhCC-----EEEEeccc-------------------c-----
Confidence 35677888887 7889999 9999999999999988876553 22222211 0
Q ss_pred EcCChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHH
Q 024201 178 ADITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTL 232 (271)
Q Consensus 178 ~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l 232 (271)
.+.+.++++.|||. .+|+++| +|++ +.+ ....+++.+.+
T Consensus 52 ~~~~~~l~~~~~V~------~~PT~~i---~G~~---~~G----~~~~~~l~~~~ 90 (106)
T 3kp8_A 52 GTPQAQECTEAGIT------SYPTWII---NGRT---YTG----VRSLEALAVAS 90 (106)
T ss_dssp TSCCCHHHHHTTCC------SSSEEEE---TTEE---EES----CCCHHHHHHHH
T ss_pred cchhHHHHHHcCCe------EeCEEEE---CCEE---ecC----CCCHHHHHHHh
Confidence 02457899999999 8999665 7874 222 24556655544
No 207
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=98.65 E-value=1.8e-07 Score=79.03 Aligned_cols=87 Identities=14% Similarity=0.185 Sum_probs=68.2
Q ss_pred CCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcC--cEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHH
Q 024201 107 GKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLN--TEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSI 184 (271)
Q Consensus 107 gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~g--v~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~ 184 (271)
++ ++||+|| ++||++|+...|.+.++++++++++ +.++.|..+. +.++
T Consensus 147 ~~-~~~v~f~-a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~----------------------------~~~l 196 (241)
T 3idv_A 147 AD-IILVEFY-APWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATA----------------------------ETDL 196 (241)
T ss_dssp CS-EEEEEEE-CTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTT----------------------------CHHH
T ss_pred CC-eEEEEEE-CCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCC----------------------------CHHH
Confidence 44 8999999 9999999999999999999998654 7777776553 3568
Q ss_pred HHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHH
Q 024201 185 SKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 185 ~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l 235 (271)
++.||+. ..|++++++ +|+++. +.+ ....+++++.|+..
T Consensus 197 ~~~~~v~------~~Pt~~~~~-~g~~~~-~~g----~~~~~~l~~~l~~~ 235 (241)
T 3idv_A 197 AKRFDVS------GYPTLKIFR-KGRPYD-YNG----PREKYGIVDYMIEQ 235 (241)
T ss_dssp HHHTTCC------SSSEEEEEE-TTEEEE-CCS----CCSHHHHHHHHHHH
T ss_pred HHHcCCc------ccCEEEEEE-CCeEEE-ecC----CCCHHHHHHHHHhh
Confidence 9999999 899999886 687765 222 35678888887654
No 208
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=98.62 E-value=1.5e-07 Score=84.77 Aligned_cols=84 Identities=11% Similarity=0.076 Sum_probs=65.1
Q ss_pred cEEEEEEecCCCCCChHHHHHH-------HHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCC
Q 024201 109 KYVILFFYPLDFTFVCPTEITA-------FSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADIT 181 (271)
Q Consensus 109 k~vvL~F~~~t~Cp~C~~~l~~-------L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~ 181 (271)
+++||.|| ++||+ |+...|. +.++++++++.++.++.|.++. +
T Consensus 29 ~~~lV~F~-a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~~v~~~~Vd~~~----------------------------~ 78 (350)
T 1sji_A 29 DVLCLYYH-ESVSS-DKVAQKQFQLKEIVLELVAQVLEHKDIGFVMVDAKK----------------------------E 78 (350)
T ss_dssp SEEEEEEE-CCSCS-SSTTSHHHHHHHHHHHHHHHHGGGSSEEEEEEETTT----------------------------T
T ss_pred CeEEEEEE-CCCCc-chhhCchhhhhhHHHHHHHHHHhhcCcEEEEEeCCC----------------------------C
Confidence 48999999 99999 9888888 7888888877678888887753 2
Q ss_pred hHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHH
Q 024201 182 KSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQA 234 (271)
Q Consensus 182 ~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~ 234 (271)
.++++.|||. ..|+++++ ++|++. .+.+ .+..+++.+.++.
T Consensus 79 ~~l~~~~~v~------~~Pt~~~~-~~g~~~-~~~G----~~~~~~l~~~i~~ 119 (350)
T 1sji_A 79 AKLAKKLGFD------EEGSLYVL-KGDRTI-EFDG----EFAADVLVEFLLD 119 (350)
T ss_dssp HHHHHHHTCC------STTEEEEE-ETTEEE-EECS----CCCHHHHHHHHHT
T ss_pred HHHHHhcCCC------ccceEEEE-ECCcEE-EecC----CCCHHHHHHHHHH
Confidence 4689999999 89999999 789843 3322 3567777776653
No 209
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=98.61 E-value=2.6e-07 Score=84.27 Aligned_cols=89 Identities=15% Similarity=0.230 Sum_probs=69.6
Q ss_pred CCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHh-----cCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCC
Q 024201 107 GKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEK-----LNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADIT 181 (271)
Q Consensus 107 gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~-----~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~ 181 (271)
++ ++||.|| +.||++|+...|.+.++++++++ .++.++.|.++ .+
T Consensus 22 ~~-~vlV~F~-a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~----------------------------~~ 71 (382)
T 2r2j_A 22 AD-VALVNFY-ADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCD----------------------------QH 71 (382)
T ss_dssp CS-EEEEEEE-CTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETT----------------------------TC
T ss_pred CC-eEEEEEE-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECC----------------------------cc
Confidence 44 8999999 99999999999999999999963 23777777654 24
Q ss_pred hHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHH
Q 024201 182 KSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 182 ~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l 235 (271)
.++++.||+. ..|+++++ ++|+++.+.+.+ .+..+++++.++..
T Consensus 72 ~~l~~~~~v~------~~Pt~~~f-~~G~~~~~~~~G---~~~~~~l~~~i~~~ 115 (382)
T 2r2j_A 72 SDIAQRYRIS------KYPTLKLF-RNGMMMKREYRG---QRSVKALADYIRQQ 115 (382)
T ss_dssp HHHHHHTTCC------EESEEEEE-ETTEEEEEECCS---CCSHHHHHHHHHHH
T ss_pred HHHHHhcCCC------cCCEEEEE-eCCcEeeeeecC---cchHHHHHHHHHHh
Confidence 6789999999 89998877 689987642221 35678888887755
No 210
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=98.57 E-value=5.2e-08 Score=82.32 Aligned_cols=88 Identities=11% Similarity=0.091 Sum_probs=65.1
Q ss_pred CCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHH
Q 024201 107 GKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISK 186 (271)
Q Consensus 107 gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~ 186 (271)
|+ ++||+|| ++||++|+...|.|.+++++|. ++.|+.|.++ . ..+++
T Consensus 120 ~k-~vvV~F~-a~wC~~C~~l~p~l~~la~~~~--~v~f~~vd~~-~----------------------------~~l~~ 166 (217)
T 2trc_P 120 VT-TIVVNIY-EDGVRGCDALNSSLECLAAEYP--MVKFCKIRAS-N----------------------------TGAGD 166 (217)
T ss_dssp TC-EEEEEEE-CTTSTTHHHHHHHHHHHHTTCT--TSEEEEEEHH-H----------------------------HTCST
T ss_pred Cc-EEEEEEE-CCCCccHHHHHHHHHHHHHHCC--CeEEEEEECC-c----------------------------HHHHH
Confidence 45 8999999 9999999999999999999885 6888888654 0 11334
Q ss_pred HhCCccCCCCccceEEEEEcCCCcEEEEEeccCCC---CCCHHHHHHHHHH
Q 024201 187 SYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAI---GRSVDETLRTLQA 234 (271)
Q Consensus 187 ~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~---~~~~~e~l~~l~~ 234 (271)
.|++. .+|+++++ ++|+++....+.... .-..+++.+.|..
T Consensus 167 ~~~i~------~~PTl~~~-~~G~~v~~~~G~~~~~g~~~~~~~Le~~L~~ 210 (217)
T 2trc_P 167 RFSSD------VLPTLLVY-KGGELISNFISVAEQFAEDFFAADVESFLNE 210 (217)
T ss_dssp TSCGG------GCSEEEEE-ETTEEEEEETTGGGGSCSSCCHHHHHHHHHT
T ss_pred HCCCC------CCCEEEEE-ECCEEEEEEeCCcccCcccCCHHHHHHHHHH
Confidence 57887 89999999 599999887654332 1224566665553
No 211
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=98.57 E-value=4.2e-08 Score=91.86 Aligned_cols=88 Identities=16% Similarity=0.243 Sum_probs=67.0
Q ss_pred CCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhc-CcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHH
Q 024201 107 GKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKL-NTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSIS 185 (271)
Q Consensus 107 gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~-gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~ 185 (271)
|+ ++||+|| ++||++|+...|.+.++++++++. ++.++.|..+.. ++.
T Consensus 370 ~k-~vlv~f~-a~wC~~C~~~~p~~~~l~~~~~~~~~v~~~~id~~~~-----------------------------~~~ 418 (481)
T 3f8u_A 370 NK-DVLIEFY-APWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATAN-----------------------------DVP 418 (481)
T ss_dssp TC-EEEEEEE-CTTBHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTSS-----------------------------CCC
T ss_pred CC-cEEEEEe-cCcChhHHHhhHHHHHHHHHhccCCCEEEEEEECCch-----------------------------hhH
Confidence 55 8999999 999999999999999999999865 577776766430 233
Q ss_pred HHhCCccCCCCccceEEEEEcCCCcE-EEEEeccCCCCCCHHHHHHHHHHH
Q 024201 186 KSYGVLIPDQGIALRGLFIIDKEGVI-QHSTINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 186 ~~ygv~~~~~g~~~P~~~lID~~G~V-~~~~~~~~~~~~~~~e~l~~l~~l 235 (271)
+.|++. .+|++++++++|++ +..+.+ ....+++++.|+..
T Consensus 419 ~~~~v~------~~Pt~~~~~~~~~~~~~~~~G----~~~~~~l~~~l~~~ 459 (481)
T 3f8u_A 419 SPYEVR------GFPTIYFSPANKKLNPKKYEG----GRELSDFISYLQRE 459 (481)
T ss_dssp TTCCCC------SSSEEEEECTTCTTSCEECCS----CCSHHHHHHHHHHH
T ss_pred hhCCCc------ccCEEEEEeCCCeEeeeEeCC----CCCHHHHHHHHHHh
Confidence 567888 89999999988874 333222 35688888887754
No 212
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=98.53 E-value=3e-07 Score=86.64 Aligned_cols=87 Identities=8% Similarity=0.148 Sum_probs=69.9
Q ss_pred cEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHHHh
Q 024201 109 KYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSY 188 (271)
Q Consensus 109 k~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~y 188 (271)
+++||.|| +.||++|+...|.+.++.+++++.++.++.|.++. +.++++.|
T Consensus 32 ~~~lv~F~-a~wC~~C~~~~p~~~~~a~~~~~~~v~~~~vd~~~----------------------------~~~l~~~~ 82 (504)
T 2b5e_A 32 DLVLAEFF-APWCGHCKNMAPEYVKAAETLVEKNITLAQIDCTE----------------------------NQDLCMEH 82 (504)
T ss_dssp SEEEEEEE-CTTCHHHHHHHHHHHHHHHHTTTTTCEEEEEETTT----------------------------CHHHHHHT
T ss_pred CeEEEEEE-CCCCHHHHHhHHHHHHHHHHhccCCeEEEEEECCC----------------------------CHHHHHhc
Confidence 48999999 99999999999999999999987678888887653 35689999
Q ss_pred CCccCCCCccceEEEEEcCCCcE--EEEEeccCCCCCCHHHHHHHHHHH
Q 024201 189 GVLIPDQGIALRGLFIIDKEGVI--QHSTINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 189 gv~~~~~g~~~P~~~lID~~G~V--~~~~~~~~~~~~~~~e~l~~l~~l 235 (271)
|+. ..|+++++. +|++ +..+.+ .+..+++.+.++..
T Consensus 83 ~v~------~~Pt~~~~~-~g~~~~~~~~~G----~~~~~~l~~~l~~~ 120 (504)
T 2b5e_A 83 NIP------GFPSLKIFK-NSDVNNSIDYEG----PRTAEAIVQFMIKQ 120 (504)
T ss_dssp TCC------SSSEEEEEE-TTCTTCEEECCS----CCSHHHHHHHHHHH
T ss_pred CCC------cCCEEEEEe-CCccccceeecC----CCCHHHHHHHHHHh
Confidence 999 899999995 6775 444322 35678888877654
No 213
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=98.51 E-value=6.6e-07 Score=75.27 Aligned_cols=82 Identities=11% Similarity=0.133 Sum_probs=61.8
Q ss_pred EEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHHHhC
Q 024201 110 YVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYG 189 (271)
Q Consensus 110 ~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~yg 189 (271)
.+|+.|| ++||++|+...|.+.+++.++. ++.++.|..+. +.++++.||
T Consensus 138 ~~~v~F~-a~wC~~C~~~~~~~~~~~~~~~--~v~~~~vd~~~----------------------------~~~l~~~~~ 186 (229)
T 2ywm_A 138 IEIWVFV-TTSCGYCPSAAVMAWDFALAND--YITSKVIDASE----------------------------NQDLAEQFQ 186 (229)
T ss_dssp EEEEEEE-CTTCTTHHHHHHHHHHHHHHCT--TEEEEEEEGGG----------------------------CHHHHHHTT
T ss_pred eEEEEEE-CCCCcchHHHHHHHHHHHHHCC--CeEEEEEECCC----------------------------CHHHHHHcC
Confidence 5578899 9999999999999999998873 68888776542 356889999
Q ss_pred CccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHHH
Q 024201 190 VLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQ 236 (271)
Q Consensus 190 v~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l~ 236 (271)
+. .+|++++ ||++ ..+.+. ...+++.+.|+.+.
T Consensus 187 v~------~~Pt~~~---~G~~-~~~~G~----~~~~~l~~~l~~~~ 219 (229)
T 2ywm_A 187 VV------GVPKIVI---NKGV-AEFVGA----QPENAFLGYIMAVY 219 (229)
T ss_dssp CC------SSSEEEE---GGGT-EEEESC----CCHHHHHHHHHHHH
T ss_pred Cc------ccCEEEE---CCEE-EEeeCC----CCHHHHHHHHHHHh
Confidence 98 8999888 7884 333332 45667777776543
No 214
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=98.50 E-value=4.1e-07 Score=85.11 Aligned_cols=86 Identities=14% Similarity=0.212 Sum_probs=69.3
Q ss_pred cEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHHHh
Q 024201 109 KYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSY 188 (271)
Q Consensus 109 k~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~y 188 (271)
+++||.|| ++||++|+...|.+.+++++++++ +.++.|.++. +.++++.|
T Consensus 22 ~~~lv~F~-a~wC~~C~~~~p~~~~~a~~~~~~-v~~~~vd~~~----------------------------~~~l~~~~ 71 (481)
T 3f8u_A 22 GLMLVEFF-APWCGHAKRLAPEYEAAATRLKGI-VPLAKVDCTA----------------------------NTNTCNKY 71 (481)
T ss_dssp SEEEEEEE-CTTCHHHHHHHHHHHHHHHHTTTT-CCEEEEETTT----------------------------CHHHHHHT
T ss_pred CeEEEEEE-CCCCHHHHHhHHHHHHHHHHhcCc-eEEEEEECCC----------------------------CHHHHHhc
Confidence 48999999 999999999999999999999864 7777777653 35789999
Q ss_pred CCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHH
Q 024201 189 GVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 189 gv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l 235 (271)
|+. ..|+.+++ ++|+++..+.+ ....+++++.++..
T Consensus 72 ~v~------~~Ptl~~~-~~g~~~~~~~G----~~~~~~l~~~~~~~ 107 (481)
T 3f8u_A 72 GVS------GYPTLKIF-RDGEEAGAYDG----PRTADGIVSHLKKQ 107 (481)
T ss_dssp TCC------EESEEEEE-ETTEEEEECCS----CSSHHHHHHHHHHH
T ss_pred CCC------CCCEEEEE-eCCceeeeecC----ccCHHHHHHHHHhh
Confidence 999 89988888 78987766433 25677888777644
No 215
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=98.50 E-value=9.3e-08 Score=72.81 Aligned_cols=89 Identities=10% Similarity=0.043 Sum_probs=61.7
Q ss_pred EEEEEEecCCCCCChHHHHHHHHHHHHHHH-hcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHHHh
Q 024201 110 YVILFFYPLDFTFVCPTEITAFSDRYTEFE-KLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSY 188 (271)
Q Consensus 110 ~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~-~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~y 188 (271)
.+||+|| +.||+.|+..-+.+...++... .+.+.++-|.++.. ....++..|
T Consensus 20 ~~LV~F~-A~wC~~Ck~~~~~i~~~~~~~a~~~~~~l~~vdv~~~--------------------------~~~~la~~~ 72 (116)
T 3dml_A 20 LRLLMFE-QPGCLYCARWDAEIAPQYPLTDEGRAAPVQRLQMRDP--------------------------LPPGLELAR 72 (116)
T ss_dssp EEEEEEE-CTTCHHHHHHHHHTTTTGGGSHHHHHSCEEEEETTSC--------------------------CCTTCBCSS
T ss_pred CEEEEEE-CCCCHHHHHHHHHHHhhHHHhhhcccceEEEEECCCC--------------------------CchhHHHHC
Confidence 6999999 9999999988765544433211 12366666766641 113455667
Q ss_pred CCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHHH
Q 024201 189 GVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQ 236 (271)
Q Consensus 189 gv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l~ 236 (271)
++. .+|++++++ ||+.+.+..+. ...+++++.|+.+.
T Consensus 73 ~V~------g~PT~i~f~-~G~ev~Ri~G~----~~~~~f~~~L~~~l 109 (116)
T 3dml_A 73 PVT------FTPTFVLMA-GDVESGRLEGY----PGEDFFWPMLARLI 109 (116)
T ss_dssp CCC------SSSEEEEEE-TTEEEEEEECC----CCHHHHHHHHHHHH
T ss_pred CCC------CCCEEEEEE-CCEEEeeecCC----CCHHHHHHHHHHHH
Confidence 888 899999998 99999987653 34577888777653
No 216
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=98.47 E-value=2.9e-07 Score=74.23 Aligned_cols=46 Identities=9% Similarity=0.047 Sum_probs=36.1
Q ss_pred eEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEE
Q 024201 99 NVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGV 148 (271)
Q Consensus 99 ~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~V 148 (271)
.+.+.+-.++ ++|+.|| ..|||+|....+.|.++.+++.+ +.++.+
T Consensus 14 ~~~~G~~~a~-v~i~~f~-d~~Cp~C~~~~~~l~~l~~~~~~--v~~~~~ 59 (175)
T 3gyk_A 14 APVLGNPEGD-VTVVEFF-DYNCPYCRRAMAEVQGLVDADPN--VRLVYR 59 (175)
T ss_dssp SCEEECTTCS-EEEEEEE-CTTCHHHHHHHHHHHHHHHHCTT--EEEEEE
T ss_pred CCCcCCCCCC-EEEEEEE-CCCCccHHHHHHHHHHHHHhCCC--EEEEEE
Confidence 4556666677 8889999 89999999999999999988754 555543
No 217
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=98.45 E-value=4.1e-06 Score=66.78 Aligned_cols=91 Identities=13% Similarity=0.050 Sum_probs=64.4
Q ss_pred cCCcEEEEEEecCCCCCChHHHHHHH---HHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCCh
Q 024201 106 IGKKYVILFFYPLDFTFVCPTEITAF---SDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITK 182 (271)
Q Consensus 106 ~gkk~vvL~F~~~t~Cp~C~~~l~~L---~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~ 182 (271)
.+| +++|+|+ +.||+.|+..-... .++.+.++ +++.+|-|.+|+.+ ..
T Consensus 41 ~~K-~vlvd~~-a~wC~~C~~me~~vf~d~~V~~~l~-~~fv~v~~d~~~~~--------------------------~~ 91 (153)
T 2dlx_A 41 QNK-WLMINIQ-NVQDFACQCLNRDVWSNEAVKNIIR-EHFIFWQVYHDSEE--------------------------GQ 91 (153)
T ss_dssp HTC-EEEEEEE-CSCTTTHHHHHHHTTTCHHHHHHHH-HTEEEEEEESSSHH--------------------------HH
T ss_pred cCC-eEEEEEE-CCCCHhHHHHHHHhcCCHHHHHHHH-cCeEEEEEecCCHh--------------------------HH
Confidence 366 9999999 99999998775443 23333332 26777777775421 13
Q ss_pred HHHHHhCCccCCCCccceEEEEEcCC-CcEEEEEeccCCCCCCHHHHHHHHHHHH
Q 024201 183 SISKSYGVLIPDQGIALRGLFIIDKE-GVIQHSTINNLAIGRSVDETLRTLQALQ 236 (271)
Q Consensus 183 ~~~~~ygv~~~~~g~~~P~~~lID~~-G~V~~~~~~~~~~~~~~~e~l~~l~~l~ 236 (271)
.+.+.|++. ..|++++||++ |+.+... + +.+.+++++.|+.+.
T Consensus 92 ~l~~~y~v~------~~P~~~fld~~~G~~l~~~-~----g~~~~~fl~~L~~~l 135 (153)
T 2dlx_A 92 RYIQFYKLG------DFPYVSILDPRTGQKLVEW-H----QLDVSSFLDQVTGFL 135 (153)
T ss_dssp HHHHHHTCC------SSSEEEEECTTTCCCCEEE-S----SCCHHHHHHHHHHHH
T ss_pred HHHHHcCCC------CCCEEEEEeCCCCcEeeec-C----CCCHHHHHHHHHHHH
Confidence 455788888 89999999999 8776663 2 257899999988764
No 218
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=98.42 E-value=3.1e-06 Score=69.15 Aligned_cols=103 Identities=8% Similarity=0.009 Sum_probs=70.7
Q ss_pred EEEEEEecC-------CCCCChHHHHHHHHHHHHHHHh----cCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEE
Q 024201 110 YVILFFYPL-------DFTFVCPTEITAFSDRYTEFEK----LNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIA 178 (271)
Q Consensus 110 ~vvL~F~~~-------t~Cp~C~~~l~~L~~~~~~~~~----~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~ 178 (271)
++||.|| + .||++|+...|.|.++.+++.. ..+.|.-|.+|
T Consensus 39 ~vvV~F~-A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d--------------------------- 90 (178)
T 3ga4_A 39 FNILYIT-MRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVN--------------------------- 90 (178)
T ss_dssp EEEEEEE-CCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETT---------------------------
T ss_pred cEEEEEe-CCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECc---------------------------
Confidence 7999999 6 4999999999999999999973 23444445443
Q ss_pred cCChHHHHHhCCccCCCCccceEEEEEcCCCcEE----------EEEeccCC--CCCCHHHHHHHHHHHHHhhhCCCccc
Q 024201 179 DITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQ----------HSTINNLA--IGRSVDETLRTLQALQYVQENPDEVC 246 (271)
Q Consensus 179 D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~----------~~~~~~~~--~~~~~~e~l~~l~~l~~~~~~~~~~~ 246 (271)
.+.++++.|||. .+|+.+++-+.+... ... +... .++.++++.+.|..- ...+..+.-
T Consensus 91 -~~~~la~~~~I~------siPtl~~F~~g~~~~~~~~~~~~~~~~~-y~~~~~~~~~ae~la~fi~~~--t~~~i~I~r 160 (178)
T 3ga4_A 91 -EVPQLVKDLKLQ------NVPHLVVYPPAESNKQSQFEWKTSPFYQ-YSLVPENAENTLQFGDFLAKI--LNISITVPQ 160 (178)
T ss_dssp -TCHHHHHHTTCC------SSCEEEEECCCCGGGGGGCCTTTSCCEE-ECCCGGGTTCHHHHHHHHHHH--HTCCCCCCC
T ss_pred -cCHHHHHHcCCC------CCCEEEEEcCCCCCCccccccccCCcce-eecccCCCcCHHHHHHHHHHh--cCCCccccC
Confidence 357899999999 899999995443322 011 1111 357888888888643 334445566
Q ss_pred CCCC
Q 024201 247 PAGW 250 (271)
Q Consensus 247 p~~~ 250 (271)
|.+|
T Consensus 161 p~ny 164 (178)
T 3ga4_A 161 AFNV 164 (178)
T ss_dssp SCC-
T ss_pred CCCh
Confidence 7776
No 219
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=98.42 E-value=8.5e-07 Score=87.92 Aligned_cols=91 Identities=10% Similarity=0.136 Sum_probs=70.3
Q ss_pred cccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCC
Q 024201 102 LSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADIT 181 (271)
Q Consensus 102 Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~ 181 (271)
+.++.|+ +++|.|| ++||++|+..+|.|.++++++++ ++.++.|.++. +
T Consensus 450 ~~~~~~~-~vlv~F~-a~wC~~c~~~~p~~~~~a~~~~~-~v~~~~vd~~~----------------------------~ 498 (780)
T 3apo_A 450 FPASDKE-PWLVDFF-APWSPPSRALLPELRKASTLLYG-QLKVGTLDCTI----------------------------H 498 (780)
T ss_dssp SCTTCCS-CEEEEEE-CTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTT----------------------------C
T ss_pred HHHcCCC-eEEEEEE-CCCCHHHHHHhHHHHHHHHHhcC-CeEEEEEeCCC----------------------------C
Confidence 4455666 8999999 99999999999999999999975 58888887763 1
Q ss_pred hHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHH
Q 024201 182 KSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 182 ~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l 235 (271)
..+++.||+. ..|+++++ ++|++ +.+.+ ....+++.+.++.+
T Consensus 499 ~~~~~~~~v~------~~Pt~~~~-~~g~~-~~~~g----~~~~~~l~~fi~~~ 540 (780)
T 3apo_A 499 EGLCNMYNIQ------AYPTTVVF-NQSSI-HEYEG----HHSAEQILEFIEDL 540 (780)
T ss_dssp HHHHHHTTCC------SSSEEEEE-ETTEE-EEECS----CSCHHHHHHHHHHH
T ss_pred HHHHHHcCCC------cCCeEEEE-cCCce-eeecC----cccHHHHHHHHHhh
Confidence 3488899998 79999999 46876 44322 23567777777655
No 220
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=98.40 E-value=3.1e-07 Score=85.82 Aligned_cols=66 Identities=18% Similarity=0.198 Sum_probs=55.6
Q ss_pred EEEEEEecCCCCCChHHHHHHHHHHHHHHHhc-------CcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCCh
Q 024201 110 YVILFFYPLDFTFVCPTEITAFSDRYTEFEKL-------NTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITK 182 (271)
Q Consensus 110 ~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~-------gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~ 182 (271)
++||+|| ++||++|+.+.|.+.+++++++++ .+.++.|.+|. +.
T Consensus 44 ~VlV~Fy-A~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~----------------------------~~ 94 (470)
T 3qcp_A 44 PWIVLFY-NDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCAS----------------------------EV 94 (470)
T ss_dssp CEEEEEE-CTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTT----------------------------CH
T ss_pred eEEEEEE-CCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCC----------------------------CH
Confidence 8999999 999999999999999999998743 27888787653 35
Q ss_pred HHHHHhCCccCCCCccceEEEEEcCCCc
Q 024201 183 SISKSYGVLIPDQGIALRGLFIIDKEGV 210 (271)
Q Consensus 183 ~~~~~ygv~~~~~g~~~P~~~lID~~G~ 210 (271)
++++.|+|. .+|++++++++|.
T Consensus 95 ~la~~y~V~------~~PTlilf~~gg~ 116 (470)
T 3qcp_A 95 DLCRKYDIN------FVPRLFFFYPRDS 116 (470)
T ss_dssp HHHHHTTCC------SSCEEEEEEESSC
T ss_pred HHHHHcCCC------ccCeEEEEECCCc
Confidence 789999999 8999999976553
No 221
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=98.39 E-value=4.5e-07 Score=89.90 Aligned_cols=91 Identities=10% Similarity=0.024 Sum_probs=71.2
Q ss_pred CcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHHH
Q 024201 108 KKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKS 187 (271)
Q Consensus 108 kk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ 187 (271)
++++||.|| ++||++|+...|.+.++++++++ ++.++.|..+. +.++++.
T Consensus 675 ~~~v~v~F~-a~wC~~C~~~~p~~~~la~~~~~-~~~~~~vd~~~----------------------------~~~~~~~ 724 (780)
T 3apo_A 675 KTHWVVDFY-APWSGPSQNFAPEFELLARMIKG-KVRAGKVDCQA----------------------------YPQTCQK 724 (780)
T ss_dssp SSCEEEEEE-CTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETTT----------------------------CHHHHHH
T ss_pred CCeEEEEEE-CCCCHHHHHHHHHHHHHHHHhcC-CceEEEEECCC----------------------------CHHHHHh
Confidence 348999999 99999999999999999999875 58888887643 2468889
Q ss_pred hCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHH
Q 024201 188 YGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 188 ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l 235 (271)
||+. .+|+++++ ++|+++....+......+.+++.+.|+.+
T Consensus 725 ~~v~------~~Pt~~~~-~~g~~~~~~~G~~~g~~~~~~l~~~l~~~ 765 (780)
T 3apo_A 725 AGIK------AYPSVKLY-QYERAKKSIWEEQINSRDAKTIAALIYGK 765 (780)
T ss_dssp TTCC------SSSEEEEE-EEETTTTEEEEEEECCCCHHHHHHHHHHH
T ss_pred cCCC------cCCEEEEE-cCCCccccccCcccCCcCHHHHHHHHHHH
Confidence 9998 89999999 78987765544210134678888888765
No 222
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=98.35 E-value=7.2e-07 Score=80.27 Aligned_cols=85 Identities=15% Similarity=0.157 Sum_probs=62.2
Q ss_pred CcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhc-CcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHH
Q 024201 108 KKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKL-NTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISK 186 (271)
Q Consensus 108 kk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~-gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~ 186 (271)
+++++|.|| ++||++|+...|.+.+++++++++ ++.++.|..+. .. ++
T Consensus 267 ~k~~lv~f~-a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~~~------------------~~------------~~ 315 (361)
T 3uem_A 267 KKNVFVEFY-APWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTA------------------NE------------VE 315 (361)
T ss_dssp TCEEEEEEE-CTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTT------------------CB------------CS
T ss_pred CCcEEEEEe-cCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEECCc------------------cc------------hh
Confidence 348999999 999999999999999999999865 46666564432 10 34
Q ss_pred HhCCccCCCCccceEEEEEcCC-CcEEEEEeccCCCCCCHHHHHHHHH
Q 024201 187 SYGVLIPDQGIALRGLFIIDKE-GVIQHSTINNLAIGRSVDETLRTLQ 233 (271)
Q Consensus 187 ~ygv~~~~~g~~~P~~~lID~~-G~V~~~~~~~~~~~~~~~e~l~~l~ 233 (271)
.|++. ..|++++++++ |+....+.+ .+..+++++.|+
T Consensus 316 ~~~v~------~~Pt~~~~~~~~~~~~~~~~G----~~~~~~l~~~l~ 353 (361)
T 3uem_A 316 AVKVH------SFPTLKFFPASADRTVIDYNG----ERTLDGFKKFLE 353 (361)
T ss_dssp SCCCC------SSSEEEEECSSSSCCCEECCS----CSSHHHHHHHHT
T ss_pred hcCCc------ccCeEEEEECCCCcceeEecC----CCCHHHHHHHHH
Confidence 57888 89999999665 555555432 356777777664
No 223
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=98.33 E-value=1.3e-06 Score=73.30 Aligned_cols=116 Identities=12% Similarity=0.017 Sum_probs=68.1
Q ss_pred eEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCC----CHH-------------HHHHHHH
Q 024201 99 NVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTD----SVF-------------SHLAWVQ 161 (271)
Q Consensus 99 ~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d----~~~-------------~~~~~~~ 161 (271)
.+.+....|+ ++|+.|| ..|||+|+...+.|.++.+ .++.++.+... .+. ...+|.+
T Consensus 78 ~~~~g~~~~k-~~vv~F~-d~~Cp~C~~~~~~l~~l~~----~~v~v~~~~~p~~~~~~~s~~~a~a~~~a~d~~~~~~~ 151 (216)
T 1eej_A 78 MIVYKAPQEK-HVITVFT-DITCGYCHKLHEQMADYNA----LGITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDD 151 (216)
T ss_dssp SEEECCTTCC-EEEEEEE-CTTCHHHHHHHTTHHHHHH----TTEEEEEEECCTTCSSSHHHHHHHHHHTSSSHHHHHHH
T ss_pred CeeecCCCCC-EEEEEEE-CCCCHHHHHHHHHHHHHHh----CCcEEEEEECCccCCCchHHHHHHHHHhccCHHHHHHH
Confidence 3455555666 8999999 9999999999999887754 37887766432 111 1122332
Q ss_pred HhhhcCCCCCcccceEEcCChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHHH
Q 024201 162 TDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQ 236 (271)
Q Consensus 162 ~~~~~~~~~~~~f~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l~ 236 (271)
.+... ++.........+.+.++++.||+. .+|++|+. ||+++. + ....+++.+.|+.+.
T Consensus 152 ~~~~~-~~~~~~~~~~v~~~~~l~~~~gV~------gtPt~v~~--dG~~~~---G----~~~~~~l~~~l~~~~ 210 (216)
T 1eej_A 152 VMAGK-SVAPASCDVDIADHYALGVQLGVS------GTPAVVLS--NGTLVP---G----YQPPKEMKEFLDEHQ 210 (216)
T ss_dssp HHTTC-CCCCCCCSCCHHHHHHHHHHHTCC------SSSEEECT--TSCEEE---S----CCCHHHHHHHHHHHH
T ss_pred HHhCC-CCChhHHHHHHHHHHHHHHHcCCC------ccCEEEEc--CCeEec---C----CCCHHHHHHHHHHhh
Confidence 22111 110001122234457889999999 89998654 565321 2 134566776666543
No 224
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=98.22 E-value=9.3e-06 Score=73.57 Aligned_cols=87 Identities=10% Similarity=0.042 Sum_probs=64.6
Q ss_pred CcEEEEEEecCCCCCChHHHH------HHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCC
Q 024201 108 KKYVILFFYPLDFTFVCPTEI------TAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADIT 181 (271)
Q Consensus 108 kk~vvL~F~~~t~Cp~C~~~l------~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~ 181 (271)
.+++||.|| +.||++|...- |.+.++.++++..++.+..|.++. +
T Consensus 30 ~~~vlV~Fy-ApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~~~----------------------------~ 80 (367)
T 3us3_A 30 YEVLALLYH-EPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSEK----------------------------D 80 (367)
T ss_dssp CSEEEEEEE-CCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEETTT----------------------------T
T ss_pred CCeEEEEEE-CCCchhHHHhhhhccccHHHHHHHHHhhcCCceEEEEeCcc----------------------------c
Confidence 348999999 99999984332 577788888876678888787753 3
Q ss_pred hHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHH
Q 024201 182 KSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 182 ~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l 235 (271)
.++++.|||. ..|+++++. +|+++ .+. -.+..+.+++.++..
T Consensus 81 ~~l~~~~~V~------~~PTl~~f~-~G~~~-~y~----G~~~~~~i~~~i~~~ 122 (367)
T 3us3_A 81 AAVAKKLGLT------EEDSIYVFK-EDEVI-EYD----GEFSADTLVEFLLDV 122 (367)
T ss_dssp HHHHHHHTCC------STTEEEEEE-TTEEE-ECC----SCCSHHHHHHHHHHH
T ss_pred HHHHHHcCCC------cCceEEEEE-CCcEE-EeC----CCCCHHHHHHHHHHh
Confidence 4789999999 899999995 78874 222 245678888877644
No 225
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=98.22 E-value=2.2e-06 Score=70.35 Aligned_cols=43 Identities=16% Similarity=0.131 Sum_probs=36.5
Q ss_pred cCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCC
Q 024201 106 IGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTD 151 (271)
Q Consensus 106 ~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d 151 (271)
.++ ++|+.|| ..|||+|....+.|.++.+++.+ ++.++-+.++
T Consensus 24 ~~~-~~vv~f~-d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~~~~ 66 (195)
T 3hd5_A 24 PGK-IEVLEFF-AYTCPHCAAIEPMVEDWAKTAPQ-DVVLKQVPIA 66 (195)
T ss_dssp TTC-EEEEEEE-CTTCHHHHHHHHHHHHHHHTCCT-TEEEEEEECC
T ss_pred CCC-eEEEEEE-CCCCccHHHhhHHHHHHHHHCCC-CeEEEEEecc
Confidence 355 8999999 89999999999999999888875 6888887775
No 226
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=98.15 E-value=6.2e-06 Score=67.45 Aligned_cols=42 Identities=7% Similarity=0.050 Sum_probs=34.8
Q ss_pred cCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeC
Q 024201 106 IGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVST 150 (271)
Q Consensus 106 ~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~ 150 (271)
.++ ++|+.|| ..|||+|....+.|.++.+++.+ ++.+.-+.+
T Consensus 24 ~~~-~~i~~f~-d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p~ 65 (192)
T 3h93_A 24 PGK-IEVVELF-WYGCPHCYAFEPTIVPWSEKLPA-DVHFVRLPA 65 (192)
T ss_dssp TTS-EEEEEEE-CTTCHHHHHHHHHHHHHHHTCCT-TEEEEEEEC
T ss_pred CCC-CEEEEEE-CCCChhHHHhhHHHHHHHHhCCC-CeEEEEEeh
Confidence 455 8899999 89999999999999998888765 677776655
No 227
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=98.14 E-value=1e-06 Score=83.05 Aligned_cols=86 Identities=10% Similarity=0.186 Sum_probs=60.4
Q ss_pred CCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhc--CcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHH
Q 024201 107 GKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKL--NTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSI 184 (271)
Q Consensus 107 gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~--gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~ 184 (271)
++ ++||.|| ++||++|+...|.+.++.++++.. ++.++.|..+. . + .
T Consensus 376 ~k-~vlv~F~-a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~------------------~---------~--~ 424 (504)
T 2b5e_A 376 KK-DVLVLYY-APWCGHCKRLAPTYQELADTYANATSDVLIAKLDHTE------------------N---------D--V 424 (504)
T ss_dssp TC-CEEEEEE-CTTCHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEGGG------------------C---------C--C
T ss_pred CC-CEEEEEE-CCCChhHHHHhHHHHHHHHHhhccCCcEEEEEecCCc------------------c---------c--c
Confidence 44 8999999 999999999999999999998733 45555555421 0 0 1
Q ss_pred HHHhCCccCCCCccceEEEEEcCCCcE--EEEEeccCCCCCCHHHHHHHHHHH
Q 024201 185 SKSYGVLIPDQGIALRGLFIIDKEGVI--QHSTINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 185 ~~~ygv~~~~~g~~~P~~~lID~~G~V--~~~~~~~~~~~~~~~e~l~~l~~l 235 (271)
.+ |++. .+|+++++ ++|+. +..+.+ .+..+++++.|+..
T Consensus 425 ~~-~~v~------~~Pt~~~~-~~G~~~~~~~~~G----~~~~~~l~~~i~~~ 465 (504)
T 2b5e_A 425 RG-VVIE------GYPTIVLY-PGGKKSESVVYQG----SRSLDSLFDFIKEN 465 (504)
T ss_dssp SS-CCCS------SSSEEEEE-CCTTSCCCCBCCS----CCCHHHHHHHHHHH
T ss_pred cc-CCce------ecCeEEEE-eCCceecceEecC----CCCHHHHHHHHHhc
Confidence 12 7787 88999888 78875 333222 35677777777643
No 228
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=98.04 E-value=1.5e-05 Score=67.97 Aligned_cols=120 Identities=10% Similarity=0.032 Sum_probs=68.9
Q ss_pred EecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCC---C--HHH---------HHHHHHHhhh
Q 024201 100 VKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTD---S--VFS---------HLAWVQTDRK 165 (271)
Q Consensus 100 v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d---~--~~~---------~~~~~~~~~~ 165 (271)
+.+..-.++ .+|+.|+ ..|||+|+...+.+.++.++ .+|.|+.+.+. + ... ..++.+.+..
T Consensus 90 i~~G~~~ak-~~v~~F~-D~~Cp~C~~~~~~l~~~~~~---g~v~v~~~~~p~~~~~s~~~a~a~~~a~d~~~~~~~~~~ 164 (241)
T 1v58_A 90 LLDGKKDAP-VIVYVFA-DPFCPYCKQFWQQARPWVDS---GKVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYEA 164 (241)
T ss_dssp EEESCTTCS-EEEEEEE-CTTCHHHHHHHHHHHHHHHT---TSEEEEEEECCCSSTTHHHHHHHHHHSSSHHHHHHHHHH
T ss_pred ceECCCCCC-eEEEEEE-CCCChhHHHHHHHHHHHHhC---CcEEEEEEECCcCCCcHHHHHHHHHHccCHHHHHHHHHH
Confidence 444444555 7888888 89999999999998876654 25776655431 1 111 1122233322
Q ss_pred cCCCCCcc--------cceEEcCChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHH
Q 024201 166 SGGLGDLK--------YPLIADITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 166 ~~~~~~~~--------f~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l 235 (271)
.+...++. .....+.+.++++.||+. .+|++++.|.+|++. ...+. ...+++.+.|+..
T Consensus 165 ~~~~~~l~~~~~~~~~~~~~v~~~~~l~~~~gv~------gtPt~vi~~~~G~~~-~~~G~----~~~~~L~~~l~~~ 231 (241)
T 1v58_A 165 SGGKLKLNVPANVSTEQMKVLSDNEKLMDDLGAN------VTPAIYYMSKENTLQ-QAVGL----PDQKTLNIIMGNK 231 (241)
T ss_dssp TTTCCCCCCCSSCCHHHHHHHHHHHHHHHHHTCC------SSCEEEEEETTTEEE-EEESS----CCHHHHHHHTTC-
T ss_pred HhccCCCCccccCCHHHHHHHHHHHHHHHHcCCC------CCCEEEEECCCCCEE-EecCC----CCHHHHHHHHHHH
Confidence 22111111 000122346678899999 899999999899763 32221 3466777766543
No 229
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=98.03 E-value=8.8e-06 Score=56.96 Aligned_cols=65 Identities=18% Similarity=0.175 Sum_probs=47.1
Q ss_pred EEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHHHhCCc
Q 024201 112 ILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVL 191 (271)
Q Consensus 112 vL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ygv~ 191 (271)
+++|| ++|||+|+...+.|.++.+++ |+.+..+.+|.. ..+.++++.||+.
T Consensus 4 ~~~f~-~~~C~~C~~~~~~l~~~~~~~---~~~~~~~~v~~~-------------------------~~~~~~~~~~gv~ 54 (80)
T 2k8s_A 4 KAIFY-HAGCPVCVSAEQAVANAIDPS---KYTVEIVHLGTD-------------------------KARIAEAEKAGVK 54 (80)
T ss_dssp EEEEE-ECSCHHHHHHHHHHHHHSCTT---TEEEEEEETTTC-------------------------SSTHHHHHHHTCC
T ss_pred eEEEe-CCCCCchHHHHHHHHHHHHhc---CCeEEEEEecCC-------------------------hhhHHHHHHcCCC
Confidence 56777 899999999999988776543 566666665530 0235677889998
Q ss_pred cCCCCccceEEEEEcCCCcEEEE
Q 024201 192 IPDQGIALRGLFIIDKEGVIQHS 214 (271)
Q Consensus 192 ~~~~g~~~P~~~lID~~G~V~~~ 214 (271)
.+|++++ ||+++..
T Consensus 55 ------~vPt~~i---~g~~~~~ 68 (80)
T 2k8s_A 55 ------SVPALVI---DGAAFHI 68 (80)
T ss_dssp ------EEEEEEE---TTEEEEE
T ss_pred ------cCCEEEE---CCEEEEe
Confidence 8998776 7887654
No 230
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=98.01 E-value=3.6e-05 Score=64.19 Aligned_cols=70 Identities=13% Similarity=0.070 Sum_probs=52.3
Q ss_pred ccCCcEEEEEEecCC-CCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChH
Q 024201 105 YIGKKYVILFFYPLD-FTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKS 183 (271)
Q Consensus 105 ~~gkk~vvL~F~~~t-~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~ 183 (271)
..+. ++|++|| +. ||++|+...|.+.++.+. ..++.++.|.++.++ +.+
T Consensus 20 ~~~~-v~lv~f~-~~~~C~~C~~~~~~~~~la~~--~~~v~~~~vd~~~~~--------------------------~~~ 69 (226)
T 1a8l_A 20 MVNP-VKLIVFV-RKDHCQYCDQLKQLVQELSEL--TDKLSYEIVDFDTPE--------------------------GKE 69 (226)
T ss_dssp CCSC-EEEEEEE-CSSSCTTHHHHHHHHHHHHTT--CTTEEEEEEETTSHH--------------------------HHH
T ss_pred cCCC-eEEEEEe-cCCCCchhHHHHHHHHHHHhh--CCceEEEEEeCCCcc--------------------------cHH
Confidence 3444 6778888 88 999999999999998754 235888877766421 246
Q ss_pred HHHHhCCccCCCCccceEEEEEcCCCcE
Q 024201 184 ISKSYGVLIPDQGIALRGLFIIDKEGVI 211 (271)
Q Consensus 184 ~~~~ygv~~~~~g~~~P~~~lID~~G~V 211 (271)
+++.||+. ..|+++++ ++|+.
T Consensus 70 ~~~~~~v~------~~Pt~~~~-~~g~~ 90 (226)
T 1a8l_A 70 LAKRYRID------RAPATTIT-QDGKD 90 (226)
T ss_dssp HHHHTTCC------SSSEEEEE-ETTBC
T ss_pred HHHHcCCC------cCceEEEE-cCCce
Confidence 88899999 89999888 56653
No 231
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=97.90 E-value=5.9e-05 Score=61.39 Aligned_cols=42 Identities=12% Similarity=0.025 Sum_probs=33.7
Q ss_pred cCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeC
Q 024201 106 IGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVST 150 (271)
Q Consensus 106 ~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~ 150 (271)
.++ ++|++|| ..+||+|....+.|.++.+++.. +|.+..+.+
T Consensus 24 ~a~-v~i~~f~-d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p~ 65 (193)
T 2rem_A 24 AGK-IEVVEIF-GYTCPHCAHFDSKLQAWGARQAK-DVRFTLVPA 65 (193)
T ss_dssp TTC-EEEEEEE-CTTCHHHHHHHHHHHHHHHTSCT-TEEEEEEEC
T ss_pred CCC-eEEEEEE-CCCChhHhhhhHHHHHHHHhcCC-ceEEEEeCc
Confidence 465 7888888 79999999999999988888754 577776654
No 232
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=97.88 E-value=3.7e-05 Score=62.77 Aligned_cols=42 Identities=14% Similarity=0.104 Sum_probs=34.4
Q ss_pred cCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeC
Q 024201 106 IGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVST 150 (271)
Q Consensus 106 ~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~ 150 (271)
.++ ++|+.|| ..|||+|....+.|.++.+++.. ++.+..+.+
T Consensus 21 ~~~-~~i~~f~-d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p~ 62 (195)
T 2znm_A 21 SGK-IEVLEFF-GYFCVHCHHFDPLLLKLGKALPS-DAYLRTEHV 62 (195)
T ss_dssp SSS-EEEEEEE-CTTSCCTTSSCHHHHHHHHHSCT-TEEEEEEEC
T ss_pred CCC-cEEEEEE-CCCChhHHHHhHHHHHHHHHCCC-ceEEEEecc
Confidence 455 7888899 89999999999999998888764 577777765
No 233
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=97.84 E-value=4.1e-05 Score=58.93 Aligned_cols=91 Identities=2% Similarity=-0.103 Sum_probs=63.6
Q ss_pred cCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHH
Q 024201 106 IGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSIS 185 (271)
Q Consensus 106 ~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~ 185 (271)
.+..++++.|| ++ |..|+...|.|.++.++|+.+ +.++-|.+|. ...++
T Consensus 21 ~~~~pv~v~f~-a~-~~~c~~~~p~l~~~A~~~~gk-~~f~~vd~d~----------------------------~~~~a 69 (133)
T 2djk_A 21 SAGIPLAYIFA-ET-AEERKELSDKLKPIAEAQRGV-INFGTIDAKA----------------------------FGAHA 69 (133)
T ss_dssp HTTSCEEEEEC-SC-SSSHHHHHHHHHHHHHSSTTT-SEEEEECTTT----------------------------TGGGT
T ss_pred cCCCCEEEEEe-cC-hhhHHHHHHHHHHHHHHhCCe-EEEEEEchHH----------------------------hHHHH
Confidence 34448999999 78 899999999999999998753 7777676553 23466
Q ss_pred HHhCCccCCCCcc--ceEEEEEcC-CCcEEEEEeccCCCCCCHHHHHHHHHHHH
Q 024201 186 KSYGVLIPDQGIA--LRGLFIIDK-EGVIQHSTINNLAIGRSVDETLRTLQALQ 236 (271)
Q Consensus 186 ~~ygv~~~~~g~~--~P~~~lID~-~G~V~~~~~~~~~~~~~~~e~l~~l~~l~ 236 (271)
..||+. . +|+.+|++. +|+. +.... .-....+++.+.++.+.
T Consensus 70 ~~~gi~------~~~iPtl~i~~~~~g~~-~~~~~--~g~~~~~~l~~fi~~~l 114 (133)
T 2djk_A 70 GNLNLK------TDKFPAFAIQEVAKNQK-FPFDQ--EKEITFEAIKAFVDDFV 114 (133)
T ss_dssp TTTTCC------SSSSSEEEEECTTTCCB-CCCCS--SSCCCHHHHHHHHHHHH
T ss_pred HHcCCC------cccCCEEEEEecCcCcc-cCCCC--ccccCHHHHHHHHHHHH
Confidence 778988 5 899999974 5776 33211 11234567777777654
No 234
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=97.82 E-value=3e-05 Score=56.97 Aligned_cols=87 Identities=10% Similarity=0.046 Sum_probs=55.2
Q ss_pred eEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEE
Q 024201 99 NVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIA 178 (271)
Q Consensus 99 ~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~ 178 (271)
.-.|.....+.++|++|+ +.|||+|....+.|.++. +++.+.-|.+|++
T Consensus 6 ~~~l~~~~~~~~~v~~f~-~~~C~~C~~~~~~L~~l~-----~~i~~~~vdi~~~------------------------- 54 (100)
T 1wjk_A 6 SGNLSASNRALPVLTLFT-KAPCPLCDEAKEVLQPYK-----DRFILQEVDITLP------------------------- 54 (100)
T ss_dssp CCCCCCSCCCCCEEEEEE-CSSCHHHHHHHHHTSTTS-----SSSEEEEEETTSS-------------------------
T ss_pred chhhhhccCCCCEEEEEe-CCCCcchHHHHHHHHHhh-----hCCeEEEEECCCc-------------------------
Confidence 344444444446788888 899999998888776543 2477777766520
Q ss_pred cCChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHH
Q 024201 179 DITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQ 233 (271)
Q Consensus 179 D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~ 233 (271)
.+.++++.|| . .+|.+ ++ +|+++. ++ +-+.+++.+.|+
T Consensus 55 -~~~el~~~~g-~------~vP~l-~~--~g~~~~--~~----g~~~~~l~~~l~ 92 (100)
T 1wjk_A 55 -ENSTWYERYK-F------DIPVF-HL--NGQFLM--MH----RVNTSKLEKQLR 92 (100)
T ss_dssp -TTHHHHHHSS-S------SCSEE-EE--SSSEEE--ES----SCCHHHHHHHHH
T ss_pred -chHHHHHHHC-C------CCCEE-EE--CCEEEE--ec----CCCHHHHHHHHH
Confidence 1256778898 7 78965 44 577652 22 234566666665
No 235
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.80 E-value=0.00013 Score=69.07 Aligned_cols=80 Identities=11% Similarity=0.180 Sum_probs=59.8
Q ss_pred CCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHH
Q 024201 107 GKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISK 186 (271)
Q Consensus 107 gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~ 186 (271)
++ ..|.+|| +.|||+|+...|.|.++..++. ++.+.-|..+. ..++++
T Consensus 117 ~~-~~i~~f~-a~~C~~C~~~~~~l~~~a~~~~--~v~~~~vd~~~----------------------------~~~~~~ 164 (521)
T 1hyu_A 117 GD-FEFETYY-SLSCHNCPDVVQALNLMAVLNP--RIKHTAIDGGT----------------------------FQNEIT 164 (521)
T ss_dssp SC-EEEEEEE-CTTCSSHHHHHHHHHHHHHHCT--TEEEEEEETTT----------------------------CHHHHH
T ss_pred CC-cceEEEE-CCCCcCcHHHHHHHHHHHhHcC--ceEEEEEechh----------------------------hHHHHH
Confidence 44 6788888 8999999999999999987764 67776665542 357888
Q ss_pred HhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHH
Q 024201 187 SYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQ 233 (271)
Q Consensus 187 ~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~ 233 (271)
.||+. .+|++++ ||+++.. + ....+++++.++
T Consensus 165 ~~~i~------svPt~~i---~g~~~~~--G----~~~~~~l~~~l~ 196 (521)
T 1hyu_A 165 ERNVM------GVPAVFV---NGKEFGQ--G----RMTLTEIVAKVD 196 (521)
T ss_dssp HTTCC------SSSEEEE---TTEEEEE--S----CCCHHHHHHHHC
T ss_pred HhCCC------ccCEEEE---CCEEEec--C----CCCHHHHHHHHh
Confidence 99998 8899877 8888754 2 134566666554
No 236
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=97.80 E-value=6e-05 Score=52.80 Aligned_cols=66 Identities=11% Similarity=0.085 Sum_probs=47.0
Q ss_pred EEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHHHhC--
Q 024201 112 ILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYG-- 189 (271)
Q Consensus 112 vL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~yg-- 189 (271)
|++|+ .+|||+|....+.|.++..+++ ++.+.-|.++.. .. ...++.+.||
T Consensus 3 v~~f~-~~~C~~C~~~~~~l~~l~~~~~--~i~~~~vdi~~~-----------------~~-------~~~~l~~~~~~~ 55 (85)
T 1ego_A 3 TVIFG-RSGCPYCVRAKDLAEKLSNERD--DFQYQYVDIRAE-----------------GI-------TKEDLQQKAGKP 55 (85)
T ss_dssp EEEEC-CTTSTHHHHHHHHHHHHHHHHS--SCEEEEECHHHH-----------------TC-------CSHHHHHHTCCC
T ss_pred EEEEe-CCCCCCHHHHHHHHHHHHhcCC--CceEEEEecccC-----------------hH-------HHHHHHHHhCCC
Confidence 56677 8999999999999999887654 788887765420 00 1246788888
Q ss_pred CccCCCCccceEEEEEcCCCcEEE
Q 024201 190 VLIPDQGIALRGLFIIDKEGVIQH 213 (271)
Q Consensus 190 v~~~~~g~~~P~~~lID~~G~V~~ 213 (271)
+. .+|++| + +|+.+.
T Consensus 56 ~~------~vP~i~-~--~g~~i~ 70 (85)
T 1ego_A 56 VE------TVPQIF-V--DQQHIG 70 (85)
T ss_dssp SC------CSCEEE-E--TTEEEE
T ss_pred Cc------eeCeEE-E--CCEEEE
Confidence 66 789874 4 577653
No 237
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=97.78 E-value=2.5e-05 Score=58.24 Aligned_cols=67 Identities=10% Similarity=0.097 Sum_probs=43.3
Q ss_pred EEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHHHhC
Q 024201 110 YVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYG 189 (271)
Q Consensus 110 ~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~yg 189 (271)
++++ || ++|||+|+...+.|.++..+ +.++-|..+.. ... ...++.+.||
T Consensus 21 ~vv~-f~-a~~C~~C~~~~~~l~~~~~~-----~~~v~v~~~~~--~~~---------------------~~~~l~~~~~ 70 (116)
T 2e7p_A 21 PVVV-FS-KTYCGYCNRVKQLLTQVGAS-----YKVVELDELSD--GSQ---------------------LQSALAHWTG 70 (116)
T ss_dssp SEEE-EE-CTTCHHHHHHHHHHHHHTCC-----CEEEEGGGSTT--HHH---------------------HHHHHHHHHS
T ss_pred CEEE-EE-CCCChhHHHHHHHHHHcCCC-----eEEEEccCCCC--hHH---------------------HHHHHHHHhC
Confidence 4555 88 89999999999888776422 33443333321 000 0146788899
Q ss_pred CccCCCCccceEEEEEcCCCcEEEEE
Q 024201 190 VLIPDQGIALRGLFIIDKEGVIQHST 215 (271)
Q Consensus 190 v~~~~~g~~~P~~~lID~~G~V~~~~ 215 (271)
+. .+|++ ++ +|+++...
T Consensus 71 v~------~~Pt~-~~--~g~~v~~~ 87 (116)
T 2e7p_A 71 RG------TVPNV-FI--GGKQIGGC 87 (116)
T ss_dssp CC------SSCEE-EE--TTEEEECH
T ss_pred CC------CcCEE-EE--CCEEECCh
Confidence 98 88988 44 68887653
No 238
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=97.76 E-value=0.00025 Score=56.78 Aligned_cols=50 Identities=8% Similarity=-0.047 Sum_probs=37.9
Q ss_pred eEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhc-CcEEEEEeC
Q 024201 99 NVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKL-NTEILGVST 150 (271)
Q Consensus 99 ~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~-gv~vv~VS~ 150 (271)
.+.+.+-.++ ++|+.|+ ..+||+|....+.+.++.++|.+. +|+++.+.+
T Consensus 19 ~~~~G~~~a~-v~i~~f~-D~~Cp~C~~~~~~~~~~~~~~~~~~~v~~~~~~~ 69 (175)
T 1z6m_A 19 GLHIGESNAP-VKMIEFI-NVRCPYCRKWFEESEELLAQSVKSGKVERIIKLF 69 (175)
T ss_dssp SEEESCTTCS-EEEEEEE-CTTCHHHHHHHHHHHHHHHHHHHTTSEEEEEEEC
T ss_pred CcccCCCCCC-eEEEEEE-CCCCcchHHHHHHHHHHHHHHhhCCcEEEEEEeC
Confidence 3455555676 7788888 789999999999999998888433 477777554
No 239
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=97.75 E-value=0.00014 Score=60.71 Aligned_cols=73 Identities=12% Similarity=0.003 Sum_probs=51.4
Q ss_pred EEEEEEec----CCCCCChHHHHHHHHHHHHHHHh-cCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHH
Q 024201 110 YVILFFYP----LDFTFVCPTEITAFSDRYTEFEK-LNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSI 184 (271)
Q Consensus 110 ~vvL~F~~----~t~Cp~C~~~l~~L~~~~~~~~~-~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~ 184 (271)
+++|.||. +.||+.|...+|.+.++++++.+ ..+.+..|.++ .+.++
T Consensus 22 ~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~vd~~----------------------------~~~~l 73 (229)
T 2ywm_A 22 PVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQDKIKLDIYSPF----------------------------THKEE 73 (229)
T ss_dssp CEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCTTTEEEEEECTT----------------------------TCHHH
T ss_pred CeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCCCceEEEEecCc----------------------------ccHHH
Confidence 45555551 56677888899999999888753 34776666332 35789
Q ss_pred HHHhCCccCCCCccceEEEEEcCCCcEEEEEec
Q 024201 185 SKSYGVLIPDQGIALRGLFIIDKEGVIQHSTIN 217 (271)
Q Consensus 185 ~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~ 217 (271)
++.|||. ..|+.++++ +|.....+.+
T Consensus 74 ~~~~~v~------~~Ptl~~~~-~~~~~~~~~G 99 (229)
T 2ywm_A 74 TEKYGVD------RVPTIVIEG-DKDYGIRYIG 99 (229)
T ss_dssp HHHTTCC------BSSEEEEES-SSCCCEEEES
T ss_pred HHHcCCC------cCcEEEEEC-CCcccceecC
Confidence 9999999 899999995 5665555434
No 240
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=97.69 E-value=0.0001 Score=61.42 Aligned_cols=105 Identities=14% Similarity=0.118 Sum_probs=60.6
Q ss_pred cCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCC-----CHH------------HHHHHHHHhhhcCC
Q 024201 106 IGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTD-----SVF------------SHLAWVQTDRKSGG 168 (271)
Q Consensus 106 ~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d-----~~~------------~~~~~~~~~~~~~~ 168 (271)
.++ ++|+.|| ..|||+|+...+.|.++.+ .|+.++.+... +.. ...+|.+.+.. .
T Consensus 85 ~~k-~~vv~F~-d~~Cp~C~~~~~~l~~~~~----~~v~v~~~~~p~~~~~~~s~~~a~~~~~a~d~~~a~~~~~~~-~- 156 (211)
T 1t3b_A 85 NEK-HVVTVFM-DITCHYCHLLHQQLKEYND----LGITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFALNEAEKG-N- 156 (211)
T ss_dssp TCS-EEEEEEE-CTTCHHHHHHHTTHHHHHH----TTEEEEEEECCSSTTCSHHHHHHHHHHHSSSHHHHHHHHHTT-C-
T ss_pred CCC-EEEEEEE-CCCCHhHHHHHHHHHHHHh----CCcEEEEEECCccCCCchHHHHHHHHHhCcCHHHHHHHHHcC-C-
Confidence 344 7899999 8999999999998887433 36777654321 110 01122222210 0
Q ss_pred CCCcc---cceEEcCChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHH
Q 024201 169 LGDLK---YPLIADITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 169 ~~~~~---f~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l 235 (271)
.+. .....+.+.++++.||+. .+|++++ .||+.+ .+ ....+++.+.|+..
T Consensus 157 --~~~~~~~~~~v~~~~~l~~~~gV~------gTPt~vi--~nG~~~----~G---~~~~~~l~~~l~~~ 209 (211)
T 1t3b_A 157 --LPKEVKTPNIVKKHYELGIQFGVR------GTPSIVT--STGELI----GG---YLKPADLLRALEET 209 (211)
T ss_dssp --CCSSCCCSSHHHHHHHHHHHHTCC------SSCEEEC--TTSCCC----CS---CCCHHHHHHHHHHC
T ss_pred --CCChHHHHHHHHHHHHHHHHcCCC------cCCEEEE--eCCEEe----cC---CCCHHHHHHHHHhc
Confidence 111 011122346788999999 8999887 578621 11 13567777776643
No 241
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=97.68 E-value=6.9e-05 Score=55.97 Aligned_cols=64 Identities=13% Similarity=0.145 Sum_probs=46.7
Q ss_pred EEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHHHhC
Q 024201 110 YVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYG 189 (271)
Q Consensus 110 ~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~yg 189 (271)
.+|+.|| +.|||+|....+.|.++.+++ |+.+.-|.+|. +.+++..||
T Consensus 30 ~~vv~y~-~~~C~~C~~a~~~L~~l~~e~---~i~~~~vDId~----------------------------d~~l~~~yg 77 (107)
T 2fgx_A 30 RKLVVYG-REGCHLCEEMIASLRVLQKKS---WFELEVINIDG----------------------------NEHLTRLYN 77 (107)
T ss_dssp CCEEEEE-CSSCHHHHHHHHHHHHHHHHS---CCCCEEEETTT----------------------------CHHHHHHST
T ss_pred cEEEEEe-CCCChhHHHHHHHHHHHHHhc---CCeEEEEECCC----------------------------CHHHHHHhC
Confidence 3578888 899999999999999888775 57666666653 234566677
Q ss_pred CccCCCCccceEEEEEcCCCcEEE
Q 024201 190 VLIPDQGIALRGLFIIDKEGVIQH 213 (271)
Q Consensus 190 v~~~~~g~~~P~~~lID~~G~V~~ 213 (271)
+. +|..+++ .||+++.
T Consensus 78 v~-------VP~l~~~-~dG~~v~ 93 (107)
T 2fgx_A 78 DR-------VPVLFAV-NEDKELC 93 (107)
T ss_dssp TS-------CSEEEET-TTTEEEE
T ss_pred CC-------CceEEEE-ECCEEEE
Confidence 63 6777655 5788773
No 242
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=97.68 E-value=5.8e-05 Score=54.12 Aligned_cols=73 Identities=15% Similarity=0.129 Sum_probs=47.5
Q ss_pred EEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHHHhCCc
Q 024201 112 ILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVL 191 (271)
Q Consensus 112 vL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ygv~ 191 (271)
|+.|| +.||++|....+.|.++..++ +.-|.+| .+.+++.+||+.
T Consensus 3 vv~f~-a~~C~~C~~~~~~L~~~~~~~------~~~vdid----------------------------~~~~l~~~~g~~ 47 (87)
T 1ttz_A 3 LTLYQ-RDDCHLCDQAVEALAQARAGA------FFSVFID----------------------------DDAALESAYGLR 47 (87)
T ss_dssp EEEEE-CSSCHHHHHHHHHHHHTTCCC------EEEEECT----------------------------TCHHHHHHHTTT
T ss_pred EEEEE-CCCCchHHHHHHHHHHHHHhh------eEEEECC----------------------------CCHHHHHHhCCC
Confidence 67788 899999998888776543221 2223333 345677788874
Q ss_pred cCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHH
Q 024201 192 IPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 192 ~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l 235 (271)
+|+.++ .||+++. + .-+.+++.+.|+.+
T Consensus 48 -------vPtl~~--~~G~~v~---g----~~~~~~L~~~l~~~ 75 (87)
T 1ttz_A 48 -------VPVLRD--PMGRELD---W----PFDAPRLRAWLDAA 75 (87)
T ss_dssp -------CSEEEC--TTCCEEE---S----CCCHHHHHHHHHTC
T ss_pred -------cCeEEE--ECCEEEe---C----CCCHHHHHHHHHHH
Confidence 687766 7899874 2 13456676766543
No 243
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=97.46 E-value=0.001 Score=59.47 Aligned_cols=93 Identities=11% Similarity=0.078 Sum_probs=64.3
Q ss_pred EEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHHHhC
Q 024201 110 YVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYG 189 (271)
Q Consensus 110 ~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~yg 189 (271)
.++|+|+ +.||+.|....+.+.+++++|+++ +.++.|..+.. ....+++.||
T Consensus 137 ~~~v~F~-~~~~~~~~~~~~~~~~~A~~~~~~-i~f~~vd~~~~--------------------------~~~~~~~~fg 188 (361)
T 3uem_A 137 THILLFL-PKSVSDYDGKLSNFKTAAESFKGK-ILFIFIDSDHT--------------------------DNQRILEFFG 188 (361)
T ss_dssp EEEEEEC-CSSSSSHHHHHHHHHHHHGGGTTT-CEEEEECTTSG--------------------------GGHHHHHHTT
T ss_pred cEEEEEE-eCCchhHHHHHHHHHHHHHHccCc-eEEEEecCChH--------------------------HHHHHHHHcC
Confidence 5677888 899999999999999999999864 77777765530 1256788899
Q ss_pred CccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHHH
Q 024201 190 VLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQ 236 (271)
Q Consensus 190 v~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l~ 236 (271)
+... ..|+..+++.++....... .....+.+++.+.++...
T Consensus 189 i~~~----~~P~~~~~~~~~~~~ky~~--~~~~~~~~~l~~fi~~~l 229 (361)
T 3uem_A 189 LKKE----ECPAVRLITLEEEMTKYKP--ESEELTAERITEFCHRFL 229 (361)
T ss_dssp CCTT----TCSEEEEEECC--CCEECC--SSCCCCHHHHHHHHHHHH
T ss_pred CCcc----CCccEEEEEcCCcccccCC--CccccCHHHHHHHHHHHh
Confidence 8711 2899999986444322211 122456788888887664
No 244
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=97.20 E-value=0.00091 Score=54.74 Aligned_cols=42 Identities=19% Similarity=0.218 Sum_probs=35.1
Q ss_pred CCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCC
Q 024201 107 GKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTD 151 (271)
Q Consensus 107 gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d 151 (271)
++ ++|+.|| ..|||+|....+.|.++.+++.+ ++.+.-+.++
T Consensus 24 ~~-v~vv~f~-d~~Cp~C~~~~~~l~~~~~~~~~-~v~~~~~p~~ 65 (193)
T 3hz8_A 24 GK-VEVLEFF-GYFCPHCAHLEPVLSKHAKSFKD-DMYLRTEHVV 65 (193)
T ss_dssp TS-EEEEEEE-CTTCHHHHHHHHHHHHHHTTCCT-TEEEEEEECC
T ss_pred CC-cEEEEEE-CCCChhHHHHHHHHHHHHHHCCC-CeEEEEecCC
Confidence 55 8899999 89999999999999998888776 5777777664
No 245
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=97.12 E-value=0.0021 Score=54.80 Aligned_cols=91 Identities=12% Similarity=0.148 Sum_probs=61.3
Q ss_pred CcEEEEEEecC--CCCCChHHHHHHHHHHHHHHHh-cCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHH
Q 024201 108 KKYVILFFYPL--DFTFVCPTEITAFSDRYTEFEK-LNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSI 184 (271)
Q Consensus 108 kk~vvL~F~~~--t~Cp~C~~~l~~L~~~~~~~~~-~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~ 184 (271)
.+++||.|| + .||+ ..|.+.++.+++.. .++.|..|.+|+. + .+.+.++
T Consensus 22 ~~~vlV~Fy-A~~pWCg----l~P~~e~lA~~~~~~~~v~~akVDvd~~-----------------g------~~~~~~l 73 (240)
T 2qc7_A 22 SKFVLVKFD-TQYPYGE----KQDEFKRLAENSASSDDLLVAEVGISDY-----------------G------DKLNMEL 73 (240)
T ss_dssp CSEEEEEEC-CSSCCSH----HHHHHHHHHHHHTTCTTEEEEEECCCCS-----------------S------SCCSHHH
T ss_pred CCCEEEEEe-CCCCCCc----chHHHHHHHHHhcCCCCeEEEEEeCCcc-----------------c------chhhHHH
Confidence 348999999 8 8988 88889999888874 3577777776530 0 0134678
Q ss_pred HHHhCCccCCCCccceEEEEEcCCCc--EEEEEeccCCCCCCHHHHHHHHHHH
Q 024201 185 SKSYGVLIPDQGIALRGLFIIDKEGV--IQHSTINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 185 ~~~ygv~~~~~g~~~P~~~lID~~G~--V~~~~~~~~~~~~~~~e~l~~l~~l 235 (271)
++.|+|... ..|+++++ ++|+ ....+.+ .+..+++.+.|+..
T Consensus 74 ~~~~~V~~~----~~PTl~~f-~~G~~~~~~~y~G----~~~~~~L~~fi~~~ 117 (240)
T 2qc7_A 74 SEKYKLDKE----SYPVFYLF-RDGDFENPVPYTG----AVKVGAIQRWLKGQ 117 (240)
T ss_dssp HHHTTCCGG----GCSEEEEE-ETTCSSCCEECCS----CSCHHHHHHHHHHT
T ss_pred HHHcCCCCC----CCCEEEEE-eCCCcCcceeecC----CCCHHHHHHHHHHh
Confidence 899998621 37888888 6777 2333222 35677777777644
No 246
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=97.04 E-value=0.00055 Score=60.02 Aligned_cols=87 Identities=11% Similarity=0.068 Sum_probs=55.5
Q ss_pred eEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEE
Q 024201 99 NVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIA 178 (271)
Q Consensus 99 ~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~ 178 (271)
.+.+.+..++ ..++.|| +.|||+|+...|.+.++.+++ . -|.+|. .+.+
T Consensus 189 ~~~la~~l~~-~~vV~F~-A~WC~~Ck~l~p~le~lA~~l-----~--~Vd~d~-------------------~d~~--- 237 (291)
T 3kp9_A 189 AVGLAAHLRQ-IGGTMYG-AYWCPHCQDQKELFGAAFDQV-----P--YVECSP-------------------NGPG--- 237 (291)
T ss_dssp HHHHHHHHHH-TTCEEEE-CTTCHHHHHHHHHHGGGGGGS-----C--EEESCS-------------------SCSS---
T ss_pred HHHHHHHhCC-CCEEEEE-CCCCHHHHHHHHHHHHHHHHc-----C--EEEEee-------------------cCch---
Confidence 5566555444 3578899 999999999999998876543 1 122321 0000
Q ss_pred cCChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHH
Q 024201 179 DITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTL 232 (271)
Q Consensus 179 D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l 232 (271)
|.+.+++++||+. ..|+.++ ||+. ..+ .++.+++.+.+
T Consensus 238 ~~~~~la~~~gI~------~vPT~~i---~G~~---~~G----~~~~~~L~~~l 275 (291)
T 3kp9_A 238 TPQAQECTEAGIT------SYPTWII---NGRT---YTG----VRSLEALAVAS 275 (291)
T ss_dssp SCCCHHHHTTTCC------STTEEEE---TTEE---EES----CCCHHHHHHHT
T ss_pred hhHHHHHHHcCCc------ccCeEEE---CCEE---ecC----CCCHHHHHHHH
Confidence 3467899999999 8999555 7863 222 24556665554
No 247
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=96.92 E-value=0.0042 Score=49.51 Aligned_cols=39 Identities=10% Similarity=0.104 Sum_probs=28.8
Q ss_pred CCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEE
Q 024201 107 GKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGV 148 (271)
Q Consensus 107 gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~V 148 (271)
++ ++|+.|+- -.||+|....+.+.++.+++.+ ++.++-+
T Consensus 21 ~~-~~vvEf~d-y~Cp~C~~~~~~~~~l~~~~~~-~~~~~~~ 59 (184)
T 4dvc_A 21 SS-PVVSEFFS-FYCPHCNTFEPIIAQLKQQLPE-GAKFQKN 59 (184)
T ss_dssp SS-CEEEEEEC-TTCHHHHHHHHHHHHHHHTSCT-TCEEEEE
T ss_pred CC-CEEEEEEC-CCCHhHHHHhHHHHHHHhhcCC-ceEEEEE
Confidence 45 77888884 4599999988889888888765 3455544
No 248
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=96.88 E-value=0.0043 Score=52.64 Aligned_cols=63 Identities=10% Similarity=0.035 Sum_probs=46.7
Q ss_pred EEEEEEecCCC--CCChHHHHHHHHHHHHHHHh-cC---cEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChH
Q 024201 110 YVILFFYPLDF--TFVCPTEITAFSDRYTEFEK-LN---TEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKS 183 (271)
Q Consensus 110 ~vvL~F~~~t~--Cp~C~~~l~~L~~~~~~~~~-~g---v~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~ 183 (271)
+++|.|| +.| |+.|....+.+.++.+++.. +| +.++-|..| .+.+
T Consensus 27 pv~v~~~-~~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d----------------------------~~~~ 77 (243)
T 2hls_A 27 PVEVHVF-LSKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYYRE----------------------------SDSD 77 (243)
T ss_dssp CEEEEEE-ECSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEETT----------------------------TTHH
T ss_pred CEEEEEE-eCCCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEecCC----------------------------cCHH
Confidence 7889999 789 99999999988888877421 12 555444332 3467
Q ss_pred HHHHhCCccCCCCccceEEEEEcCCC
Q 024201 184 ISKSYGVLIPDQGIALRGLFIIDKEG 209 (271)
Q Consensus 184 ~~~~ygv~~~~~g~~~P~~~lID~~G 209 (271)
+++.||+. ..|++.++ +|
T Consensus 78 ~~~~~gv~------~~Pt~~i~--~g 95 (243)
T 2hls_A 78 KFSEFKVE------RVPTVAFL--GG 95 (243)
T ss_dssp HHHHTTCC------SSSEEEET--TT
T ss_pred HHHhcCCC------cCCEEEEE--CC
Confidence 89999998 78998887 46
No 249
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.72 E-value=0.0047 Score=47.16 Aligned_cols=65 Identities=17% Similarity=0.216 Sum_probs=40.4
Q ss_pred EEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHHHhCCc
Q 024201 112 ILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVL 191 (271)
Q Consensus 112 vL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ygv~ 191 (271)
|++|+ ..|||+|+...+.|.++ ++.+..|.+|...+..++ ..++.+.+|+.
T Consensus 29 vvvf~-~~~Cp~C~~~~~~L~~~-------~i~~~~vdid~~~~~~~~---------------------~~~l~~~~g~~ 79 (130)
T 2cq9_A 29 VVIFS-KTSCSYCTMAKKLFHDM-------NVNYKVVELDLLEYGNQF---------------------QDALYKMTGER 79 (130)
T ss_dssp EEEEE-CSSCSHHHHHHHHHHHH-------TCCCEEEETTTSTTHHHH---------------------HHHHHHHHSSC
T ss_pred EEEEE-cCCChHHHHHHHHHHHc-------CCCcEEEECcCCcCcHHH---------------------HHHHHHHhCCC
Confidence 33477 89999999877766653 455555666542111111 13567778887
Q ss_pred cCCCCccceEEEEEcCCCcEEEE
Q 024201 192 IPDQGIALRGLFIIDKEGVIQHS 214 (271)
Q Consensus 192 ~~~~g~~~P~~~lID~~G~V~~~ 214 (271)
.+|++| + +|+++..
T Consensus 80 ------~vP~l~-i--~G~~igg 93 (130)
T 2cq9_A 80 ------TVPRIF-V--NGTFIGG 93 (130)
T ss_dssp ------CSSEEE-E--TTEEEEE
T ss_pred ------CcCEEE-E--CCEEEcC
Confidence 789875 4 6876654
No 250
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=96.59 E-value=0.021 Score=41.02 Aligned_cols=81 Identities=14% Similarity=0.101 Sum_probs=49.2
Q ss_pred EEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHHHhCCc
Q 024201 112 ILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVL 191 (271)
Q Consensus 112 vL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ygv~ 191 (271)
|.+|. .+|||+|......| +++|+.+.-|.++...+..+.+.+. ..|..
T Consensus 6 I~vYs-~~~Cp~C~~aK~~L-------~~~gi~y~~idi~~d~~~~~~~~~~-----------------------~~G~~ 54 (92)
T 2lqo_A 6 LTIYT-TSWCGYCLRLKTAL-------TANRIAYDEVDIEHNRAAAEFVGSV-----------------------NGGNR 54 (92)
T ss_dssp EEEEE-CTTCSSHHHHHHHH-------HHTTCCCEEEETTTCHHHHHHHHHH-----------------------SSSSS
T ss_pred EEEEc-CCCCHhHHHHHHHH-------HhcCCceEEEEcCCCHHHHHHHHHH-----------------------cCCCC
Confidence 44555 79999998765444 3458888778777543333332221 11344
Q ss_pred cCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHHHHhh
Q 024201 192 IPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQYVQ 239 (271)
Q Consensus 192 ~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l~~~~ 239 (271)
..|.+|| .||.++.. .+.+++.+.|+++.-++
T Consensus 55 ------tVP~I~i--~Dg~~l~~--------~~~~el~~~L~el~gL~ 86 (92)
T 2lqo_A 55 ------TVPTVKF--ADGSTLTN--------PSADEVKAKLVKIAGLE 86 (92)
T ss_dssp ------CSCEEEE--TTSCEEES--------CCHHHHHHHHHHHHCCS
T ss_pred ------EeCEEEE--eCCEEEeC--------CCHHHHHHHHHHhcCCc
Confidence 5676655 46876542 35778888888775444
No 251
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=96.56 E-value=0.004 Score=48.85 Aligned_cols=112 Identities=14% Similarity=0.105 Sum_probs=60.3
Q ss_pred EecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEE--eC---CCH------------HHHHHHHHH
Q 024201 100 VKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGV--ST---DSV------------FSHLAWVQT 162 (271)
Q Consensus 100 v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~V--S~---d~~------------~~~~~~~~~ 162 (271)
+.+..-.|+ .+|+.|. -.+||+|+...+.|.++ . ++.|+.+ .. .+. +..+.|.+-
T Consensus 7 i~~~~~~a~-~~vv~f~-D~~Cp~C~~~~~~l~~l----~--~v~v~~~~~P~~~~~~~s~~~a~a~~ca~d~~~a~~~~ 78 (147)
T 3gv1_A 7 IKEVRGNGK-LKVAVFS-DPDCPFCKRLEHEFEKM----T--DVTVYSFMMPIAGLHPDAARKAQILWCQPDRAKAWTDW 78 (147)
T ss_dssp EEEEETTCC-EEEEEEE-CTTCHHHHHHHHHHTTC----C--SEEEEEEECCCTTTCTTHHHHHHHHHTSSSHHHHHHHH
T ss_pred eeeecCCCC-EEEEEEE-CCCChhHHHHHHHHhhc----C--ceEEEEEEccccccChhHHHHHHHHHcCCCHHHHHHHH
Confidence 344333456 6777887 78899999988887653 2 4555543 33 111 111233322
Q ss_pred hhhcCCCCC--cccceEEcCChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHH
Q 024201 163 DRKSGGLGD--LKYPLIADITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 163 ~~~~~~~~~--~~f~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l 235 (271)
+. .+.... ....-..+.+.++++.|||. .+|+++| .||+++. +. ...+++.+.|+..
T Consensus 79 ~~-~g~~~~~~~~~~~~v~~~~~la~~~gI~------gtPt~vi--~nG~~i~---G~----~~~~~l~~~i~~~ 137 (147)
T 3gv1_A 79 MR-KGKFPVGGSICDNPVAETTSLGEQFGFN------GTPTLVF--PNGRTQS---GY----SPMPQLEEIIRKN 137 (147)
T ss_dssp HH-HCCCCTTCCCCSCSHHHHHHHHHHTTCC------SSCEEEC--TTSCEEE---SC----CCTTHHHHHHHHT
T ss_pred Hh-CCCCCCccHHHHHHHHHHHHHHHHhCCC------ccCEEEE--ECCEEee---CC----CCHHHHHHHHHHH
Confidence 21 111100 01111122357889999999 8999887 5787422 21 2345666666543
No 252
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=96.55 E-value=0.019 Score=49.05 Aligned_cols=93 Identities=15% Similarity=0.099 Sum_probs=61.1
Q ss_pred CcEEEEEEec-CCCCCChHHHHHHHHHHHHHHHh--cCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHH
Q 024201 108 KKYVILFFYP-LDFTFVCPTEITAFSDRYTEFEK--LNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSI 184 (271)
Q Consensus 108 kk~vvL~F~~-~t~Cp~C~~~l~~L~~~~~~~~~--~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~ 184 (271)
.+++||.||. +.||+ ..|.+.++.+++.. .+|.|.-|.++.. +- ..+.++
T Consensus 33 ~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d~~-----------------g~------~~n~~l 85 (248)
T 2c0g_A 33 FPYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVKDY-----------------GE------LENKAL 85 (248)
T ss_dssp SSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEECSS-----------------TT------CTTHHH
T ss_pred CCCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECCcc-----------------cc------cccHHH
Confidence 3488888984 68997 88889899888865 3577777776530 00 014678
Q ss_pred HHHhCCccCCCCccceEEEEEcCCCcE--EEEEeccCCCCCCHHHHHHHHHHH
Q 024201 185 SKSYGVLIPDQGIALRGLFIIDKEGVI--QHSTINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 185 ~~~ygv~~~~~g~~~P~~~lID~~G~V--~~~~~~~~~~~~~~~e~l~~l~~l 235 (271)
++.|+|... .+|+++++- |++ ...+ ...-.+..+++.+.|+..
T Consensus 86 a~~~~V~~~----~~PTl~~F~--G~~~~~~~y--~~~G~~~~~~L~~fi~~~ 130 (248)
T 2c0g_A 86 GDRYKVDDK----NFPSIFLFK--GNADEYVQL--PSHVDVTLDNLKAFVSAN 130 (248)
T ss_dssp HHHTTCCTT----SCCEEEEES--SSSSSEEEC--CTTSCCCHHHHHHHHHHH
T ss_pred HHHhCCCcC----CCCeEEEEe--CCcCcceee--cccCCCCHHHHHHHHHHh
Confidence 899998721 379999884 873 2221 001246778888887654
No 253
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=96.46 E-value=0.0057 Score=41.99 Aligned_cols=33 Identities=12% Similarity=0.178 Sum_probs=24.6
Q ss_pred EEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCC
Q 024201 112 ILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDS 152 (271)
Q Consensus 112 vL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~ 152 (271)
|+.|+ .+|||+|+...+.|.+ .|+.+..|.++.
T Consensus 3 v~~f~-~~~C~~C~~~~~~l~~-------~~i~~~~vdi~~ 35 (81)
T 1h75_A 3 ITIYT-RNDCVQCHATKRAMEN-------RGFDFEMINVDR 35 (81)
T ss_dssp EEEEE-CTTCHHHHHHHHHHHH-------TTCCCEEEETTT
T ss_pred EEEEc-CCCChhHHHHHHHHHH-------CCCCeEEEECCC
Confidence 56677 8999999987766653 467777777764
No 254
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=96.35 E-value=0.0064 Score=47.59 Aligned_cols=64 Identities=17% Similarity=0.217 Sum_probs=38.7
Q ss_pred EEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHHHhCCc
Q 024201 112 ILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVL 191 (271)
Q Consensus 112 vL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ygv~ 191 (271)
|++|+ .+|||+|+...+.|.++ |+.+..|.+|...+..++ ..++.+.+|+.
T Consensus 51 Vvvf~-~~~Cp~C~~~k~~L~~~-------~i~~~~vdId~~~~~~~~---------------------~~~L~~~~g~~ 101 (146)
T 2ht9_A 51 VVIFS-KTSCSYCTMAKKLFHDM-------NVNYKVVELDLLEYGNQF---------------------QDALYKMTGER 101 (146)
T ss_dssp EEEEE-CTTCHHHHHHHHHHHHH-------TCCCEEEEGGGCTTHHHH---------------------HHHHHHHHSCC
T ss_pred EEEEE-CCCChhHHHHHHHHHHc-------CCCeEEEECccCcCCHHH---------------------HHHHHHHhCCC
Confidence 34477 89999999877766643 455444544421000111 13577788887
Q ss_pred cCCCCccceEEEEEcCCCcEEE
Q 024201 192 IPDQGIALRGLFIIDKEGVIQH 213 (271)
Q Consensus 192 ~~~~g~~~P~~~lID~~G~V~~ 213 (271)
.+|++| + +|+++.
T Consensus 102 ------tvP~if-i--~G~~ig 114 (146)
T 2ht9_A 102 ------TVPRIF-V--NGTFIG 114 (146)
T ss_dssp ------CSCEEE-E--TTEEEE
T ss_pred ------CcCeEE-E--CCEEEe
Confidence 789875 4 687654
No 255
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=96.29 E-value=0.0061 Score=45.26 Aligned_cols=65 Identities=9% Similarity=0.069 Sum_probs=39.6
Q ss_pred EEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcE---EEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHHH
Q 024201 111 VILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTE---ILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKS 187 (271)
Q Consensus 111 vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~---vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ 187 (271)
.|++|+ .+|||+|+...+.|. +.|+. +..|.+|...+... ...++.+.
T Consensus 20 ~vv~f~-~~~Cp~C~~~~~~L~-------~~~~~~~~~~~vdi~~~~~~~~---------------------~~~~l~~~ 70 (114)
T 2hze_A 20 KVTIFV-KYTCPFCRNALDILN-------KFSFKRGAYEIVDIKEFKPENE---------------------LRDYFEQI 70 (114)
T ss_dssp CEEEEE-CTTCHHHHHHHHHHT-------TSCBCTTSEEEEEGGGSSSHHH---------------------HHHHHHHH
T ss_pred CEEEEE-eCCChhHHHHHHHHH-------HcCCCcCceEEEEccCCCChHH---------------------HHHHHHHH
Confidence 466677 899999987766554 34555 65565543110000 01357778
Q ss_pred hCCccCCCCccceEEEEEcCCCcEEE
Q 024201 188 YGVLIPDQGIALRGLFIIDKEGVIQH 213 (271)
Q Consensus 188 ygv~~~~~g~~~P~~~lID~~G~V~~ 213 (271)
+|+. .+|.+| + +|+.+.
T Consensus 71 ~g~~------~vP~v~-i--~g~~ig 87 (114)
T 2hze_A 71 TGGK------TVPRIF-F--GKTSIG 87 (114)
T ss_dssp HSCC------SSCEEE-E--TTEEEE
T ss_pred hCCC------CcCEEE-E--CCEEEe
Confidence 8887 789765 4 587654
No 256
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=96.28 E-value=0.0084 Score=43.38 Aligned_cols=23 Identities=13% Similarity=0.157 Sum_probs=17.6
Q ss_pred EEEEEecCCCCCChHHHHHHHHHH
Q 024201 111 VILFFYPLDFTFVCPTEITAFSDR 134 (271)
Q Consensus 111 vvL~F~~~t~Cp~C~~~l~~L~~~ 134 (271)
.|++|+ .+|||+|+...+.|.++
T Consensus 13 ~v~~f~-~~~C~~C~~~~~~L~~~ 35 (105)
T 1kte_A 13 KVVVFI-KPTCPFCRKTQELLSQL 35 (105)
T ss_dssp CEEEEE-CSSCHHHHHHHHHHHHS
T ss_pred CEEEEE-cCCCHhHHHHHHHHHHc
Confidence 356677 89999999887777653
No 257
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=96.18 E-value=0.01 Score=44.51 Aligned_cols=64 Identities=17% Similarity=0.251 Sum_probs=38.3
Q ss_pred EEEEecCCCCCChHHH-HHHHHHHHHHHHhcC---cEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHHH
Q 024201 112 ILFFYPLDFTFVCPTE-ITAFSDRYTEFEKLN---TEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKS 187 (271)
Q Consensus 112 vL~F~~~t~Cp~C~~~-l~~L~~~~~~~~~~g---v~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ 187 (271)
|++|+ .+|||+|+.. .+.| ++.+ +.+..|.+|...+..+. ..++.+.
T Consensus 27 Vvvf~-~~~Cp~C~~alk~~L-------~~~~~~~i~~~~vdid~~~~~~~~---------------------~~~l~~~ 77 (118)
T 3c1r_A 27 IFVAS-KTYCPYCHAALNTLF-------EKLKVPRSKVLVLQLNDMKEGADI---------------------QAALYEI 77 (118)
T ss_dssp EEEEE-CSSCHHHHHHHHHHH-------TTSCCCGGGEEEEEGGGSTTHHHH---------------------HHHHHHH
T ss_pred EEEEE-cCCCcCHHHHHHHHH-------HHcCCCCCCeEEEECccCCChHHH---------------------HHHHHHH
Confidence 55577 7999999976 3333 3344 66666666532110000 1356777
Q ss_pred hCCccCCCCccceEEEEEcCCCcEEE
Q 024201 188 YGVLIPDQGIALRGLFIIDKEGVIQH 213 (271)
Q Consensus 188 ygv~~~~~g~~~P~~~lID~~G~V~~ 213 (271)
+|+. .+|.+| | +|+.+.
T Consensus 78 ~g~~------tvP~vf-i--~g~~ig 94 (118)
T 3c1r_A 78 NGQR------TVPNIY-I--NGKHIG 94 (118)
T ss_dssp HSCC------SSCEEE-E--TTEEEE
T ss_pred hCCC------CcCEEE-E--CCEEEE
Confidence 8887 788764 4 677654
No 258
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=95.97 E-value=0.013 Score=39.37 Aligned_cols=33 Identities=12% Similarity=0.107 Sum_probs=23.9
Q ss_pred EEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCC
Q 024201 112 ILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDS 152 (271)
Q Consensus 112 vL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~ 152 (271)
|+.|+ ..|||.|+...+.|.+ .|+.+..|.++.
T Consensus 3 i~~y~-~~~C~~C~~~~~~l~~-------~~i~~~~~di~~ 35 (75)
T 1r7h_A 3 ITLYT-KPACVQCTATKKALDR-------AGLAYNTVDISL 35 (75)
T ss_dssp EEEEE-CTTCHHHHHHHHHHHH-------TTCCCEEEETTT
T ss_pred EEEEe-CCCChHHHHHHHHHHH-------cCCCcEEEECCC
Confidence 45666 8999999987776654 367777777664
No 259
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=95.77 E-value=0.04 Score=38.50 Aligned_cols=32 Identities=6% Similarity=0.137 Sum_probs=22.6
Q ss_pred EEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCC
Q 024201 112 ILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTD 151 (271)
Q Consensus 112 vL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d 151 (271)
|+.|+ ..|||.|+...+.|.+ .|+.+..|.++
T Consensus 8 v~~y~-~~~C~~C~~~~~~L~~-------~~i~~~~vdv~ 39 (89)
T 2klx_A 8 IILYT-RPNCPYCKRARDLLDK-------KGVKYTDIDAS 39 (89)
T ss_dssp EEEES-CSCCTTTHHHHHHHHH-------HTCCEEEECSC
T ss_pred EEEEE-CCCChhHHHHHHHHHH-------cCCCcEEEECC
Confidence 45566 8999999987666554 35677667666
No 260
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=95.59 E-value=0.058 Score=37.80 Aligned_cols=32 Identities=13% Similarity=0.219 Sum_probs=20.5
Q ss_pred EEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCC
Q 024201 112 ILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTD 151 (271)
Q Consensus 112 vL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d 151 (271)
|.+|+ ..|||.|+.....|.++ |+.+-.+.++
T Consensus 14 v~ly~-~~~Cp~C~~~~~~L~~~-------gi~~~~~~v~ 45 (92)
T 3ic4_A 14 VLMYG-LSTCPHCKRTLEFLKRE-------GVDFEVIWID 45 (92)
T ss_dssp SEEEE-CTTCHHHHHHHHHHHHH-------TCCCEEEEGG
T ss_pred EEEEE-CCCChHHHHHHHHHHHc-------CCCcEEEEee
Confidence 45566 79999999876666543 4544445444
No 261
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.56 E-value=0.087 Score=42.52 Aligned_cols=125 Identities=11% Similarity=0.071 Sum_probs=76.7
Q ss_pred CCCCCCeEEeeecCCCceeEecc----cccCCcEEEEEEecCCCCCChHHHHHHH---HHHHHHHHhcCcEEEEEeCCCH
Q 024201 81 GNTAPDFAAEAVFDQEFINVKLS----DYIGKKYVILFFYPLDFTFVCPTEITAF---SDRYTEFEKLNTEILGVSTDSV 153 (271)
Q Consensus 81 G~~~Pdf~l~~~~~~~g~~v~Ls----d~~gkk~vvL~F~~~t~Cp~C~~~l~~L---~~~~~~~~~~gv~vv~VS~d~~ 153 (271)
|...|.|--- .=.+.+..+ .-.+| +++|++. ..||+.|......+ .++.+-++ .++.+.+.+++..
T Consensus 29 g~~~p~F~~g----s~~~Al~~A~~~~k~e~K-~LlVyLh-s~~~~~~~~f~~~~L~~~~V~~~l~-~nfV~w~~dv~~~ 101 (178)
T 2ec4_A 29 GDCHPVFFIG----SLEAAFQEAFYVKARDRK-LLAIYLH-HDESVLTNVFCSQMLCAESIVSYLS-QNFITWAWDLTKD 101 (178)
T ss_dssp CSCCCCCCCS----CHHHHHHTTTSSCTTTCC-EEEEEEE-CSSCSHHHHHHHHTTTCHHHHHHHH-HTEEEEEEECCSH
T ss_pred CCCCCCeeeC----CHHHHHHHHHhhhhhhCc-EEEEEEe-CCCCccHHHHHHHhcCCHHHHHHHH-cCEEEEEEeCCCc
Confidence 6677888532 211233333 33455 8999999 89999987655332 11223333 3788888888887
Q ss_pred HHHHHHHHHhhhcCCCCCcccceEEcCChHHH---HHhCCccCCCCccceEEEEEcCCC---cEEEEEeccCCCCCCHHH
Q 024201 154 FSHLAWVQTDRKSGGLGDLKYPLIADITKSIS---KSYGVLIPDQGIALRGLFIIDKEG---VIQHSTINNLAIGRSVDE 227 (271)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~---~~ygv~~~~~g~~~P~~~lID~~G---~V~~~~~~~~~~~~~~~e 227 (271)
+....+.....+. + ...++ +.|++. ..|..+||+++| +|+.+..|. .+.++
T Consensus 102 e~~~~~~~~~~~~-----~--------g~~~a~~~~~~~~~------~~P~l~ii~~~~~~~~vl~~~~G~----~~~~~ 158 (178)
T 2ec4_A 102 SNRARFLTMCNRH-----F--------GSVVAQTIRTQKTD------QFPLFLIIMGKRSSNEVLNVIQGN----TTVDE 158 (178)
T ss_dssp HHHHHHHHHHHHH-----T--------CHHHHHHHHHSCST------TCSEEEEECCCSSCCCEEEEECSC----CCHHH
T ss_pred hhhhhhhhhhhhh-----h--------HHHHHHHHhhcCCC------CCCeEEEEEcCCCceEEEEEEeCC----CCHHH
Confidence 7555554443111 0 12343 448888 899999998774 677775443 35788
Q ss_pred HHHHHHHH
Q 024201 228 TLRTLQAL 235 (271)
Q Consensus 228 ~l~~l~~l 235 (271)
++..|+..
T Consensus 159 ll~~L~~~ 166 (178)
T 2ec4_A 159 LMMRLMAA 166 (178)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88777654
No 262
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=95.29 E-value=0.044 Score=39.80 Aligned_cols=27 Identities=4% Similarity=-0.141 Sum_probs=18.8
Q ss_pred CCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCC
Q 024201 119 DFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDS 152 (271)
Q Consensus 119 t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~ 152 (271)
.|||+|....+.|.++ |+.+.-|.++.
T Consensus 30 ~~C~~C~~~~~~L~~~-------~i~~~~vdi~~ 56 (105)
T 2yan_A 30 AKCGFSKQILEILNST-------GVEYETFDILE 56 (105)
T ss_dssp BCTTHHHHHHHHHHHH-------TCCCEEEEGGG
T ss_pred CCCccHHHHHHHHHHC-------CCCeEEEECCC
Confidence 8999999877666543 56666666653
No 263
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=95.25 E-value=0.051 Score=36.99 Aligned_cols=32 Identities=9% Similarity=0.139 Sum_probs=21.8
Q ss_pred EEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCC
Q 024201 112 ILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTD 151 (271)
Q Consensus 112 vL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d 151 (271)
|+.|+ ..|||.|+...+.|.+ .|+.+.-|.++
T Consensus 3 i~~y~-~~~C~~C~~~~~~l~~-------~~i~~~~~~i~ 34 (82)
T 1fov_A 3 VEIYT-KETCPYCHRAKALLSS-------KGVSFQELPID 34 (82)
T ss_dssp EEEEE-CSSCHHHHHHHHHHHH-------HTCCCEEEECT
T ss_pred EEEEE-CCCChhHHHHHHHHHH-------CCCCcEEEECC
Confidence 44566 7999999987766654 25666666665
No 264
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=95.19 E-value=0.0035 Score=51.60 Aligned_cols=42 Identities=12% Similarity=0.161 Sum_probs=34.4
Q ss_pred CCcEEEEEEecCCCCCChHHHHHHH---HHHHHHHHhcCcEEEEEeCC
Q 024201 107 GKKYVILFFYPLDFTFVCPTEITAF---SDRYTEFEKLNTEILGVSTD 151 (271)
Q Consensus 107 gkk~vvL~F~~~t~Cp~C~~~l~~L---~~~~~~~~~~gv~vv~VS~d 151 (271)
++ ++||.|| +.|||+|....|.| .++.+++.+ +|.+.-+.++
T Consensus 113 ~~-~~vveFf-~~~C~~C~~~~p~~~~~~~l~~~~~~-~v~~~~~~v~ 157 (197)
T 1un2_A 113 GA-PQVLEFF-SFFCPHCYQFEEVLHISDNVKKKLPE-GVKMTKYHVN 157 (197)
T ss_dssp TC-CSEEEEE-CTTCHHHHHHHHTSCHHHHHTTSSCT-TCCEEEEECS
T ss_pred CC-CEEEEEE-CCCChhHHHhCcccccHHHHHHHCCC-CCEEEEeccC
Confidence 55 7999999 89999999999988 888877764 6777777665
No 265
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=95.14 E-value=0.037 Score=40.68 Aligned_cols=32 Identities=22% Similarity=0.345 Sum_probs=21.4
Q ss_pred EEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCC
Q 024201 112 ILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTD 151 (271)
Q Consensus 112 vL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d 151 (271)
|++|+ .+|||+|....+-|.+ .|+.+-.|.+|
T Consensus 21 v~vy~-~~~Cp~C~~~~~~L~~-------~~i~~~~~di~ 52 (113)
T 3rhb_A 21 VVIYS-KTWCSYCTEVKTLFKR-------LGVQPLVVELD 52 (113)
T ss_dssp EEEEE-CTTCHHHHHHHHHHHH-------TTCCCEEEEGG
T ss_pred EEEEE-CCCChhHHHHHHHHHH-------cCCCCeEEEee
Confidence 55577 7999999977666654 35555555554
No 266
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=95.13 E-value=0.07 Score=43.32 Aligned_cols=41 Identities=12% Similarity=0.164 Sum_probs=30.4
Q ss_pred CCcEEEEEEecCCCCCChHHHHHHH---HHHHHHHHhcCcEEEEEeC
Q 024201 107 GKKYVILFFYPLDFTFVCPTEITAF---SDRYTEFEKLNTEILGVST 150 (271)
Q Consensus 107 gkk~vvL~F~~~t~Cp~C~~~l~~L---~~~~~~~~~~gv~vv~VS~ 150 (271)
++ ++|+.|+ .-+||+|....+.| .++.+++.+ ++.++-+.+
T Consensus 21 ~~-~~vvef~-d~~Cp~C~~~~~~l~~~~~l~~~~~~-~v~~~~~~~ 64 (191)
T 3l9s_A 21 GE-PQVLEFF-SFYCPHCYQFEEVLHVSDNVKKKLPE-GTKMTKYHV 64 (191)
T ss_dssp SS-SCEEEEE-CTTCHHHHHHHHTSCHHHHHHHHSCT-TCCEEEEEC
T ss_pred CC-CeEEEEE-CCCChhHHHhChhccchHHHHHhCCC-CcEEEEEec
Confidence 34 7888888 68899999998886 577777764 466666543
No 267
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=94.76 E-value=0.054 Score=39.15 Aligned_cols=33 Identities=15% Similarity=0.226 Sum_probs=22.4
Q ss_pred EEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCC
Q 024201 111 VILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTD 151 (271)
Q Consensus 111 vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d 151 (271)
.|+.|+ .+|||+|+...+.|.++ |+.+-.|.+|
T Consensus 23 ~v~ly~-~~~Cp~C~~ak~~L~~~-------~i~y~~vdI~ 55 (103)
T 3nzn_A 23 KVIMYG-LSTCVWCKKTKKLLTDL-------GVDFDYVYVD 55 (103)
T ss_dssp CEEEEE-CSSCHHHHHHHHHHHHH-------TBCEEEEEGG
T ss_pred eEEEEc-CCCCchHHHHHHHHHHc-------CCCcEEEEee
Confidence 355677 89999999887777543 4555445554
No 268
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=94.63 E-value=0.082 Score=39.06 Aligned_cols=33 Identities=18% Similarity=0.192 Sum_probs=22.0
Q ss_pred EEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCC
Q 024201 112 ILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDS 152 (271)
Q Consensus 112 vL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~ 152 (271)
|+.|. .+|||+|.....-|.+ .|+.+-.|.+|.
T Consensus 19 v~vy~-~~~Cp~C~~ak~~L~~-------~~i~~~~~dvd~ 51 (114)
T 3h8q_A 19 VVIFS-KSYCPHSTRVKELFSS-------LGVECNVLELDQ 51 (114)
T ss_dssp EEEEE-CTTCHHHHHHHHHHHH-------TTCCCEEEETTT
T ss_pred EEEEE-cCCCCcHHHHHHHHHH-------cCCCcEEEEecC
Confidence 34466 7999999877666554 366666666664
No 269
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=94.58 E-value=0.075 Score=40.40 Aligned_cols=32 Identities=22% Similarity=0.349 Sum_probs=20.2
Q ss_pred EEEEecCCCCCChHHH-HHHHHHHHHHHHhcC---cEEEEEeCC
Q 024201 112 ILFFYPLDFTFVCPTE-ITAFSDRYTEFEKLN---TEILGVSTD 151 (271)
Q Consensus 112 vL~F~~~t~Cp~C~~~-l~~L~~~~~~~~~~g---v~vv~VS~d 151 (271)
|++|+ .+|||+|... .+.|. +.| +.+..|.+|
T Consensus 39 Vvvy~-~~~Cp~C~~a~k~~L~-------~~~~~~i~~~~vdvd 74 (129)
T 3ctg_A 39 VFVAA-KTYCPYCKATLSTLFQ-------ELNVPKSKALVLELD 74 (129)
T ss_dssp EEEEE-CTTCHHHHHHHHHHHT-------TSCCCGGGEEEEEGG
T ss_pred EEEEE-CCCCCchHHHHHHHHH-------hcCccCCCcEEEEcc
Confidence 55666 7999999976 33333 334 665555554
No 270
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=94.57 E-value=0.19 Score=34.47 Aligned_cols=33 Identities=12% Similarity=0.045 Sum_probs=20.4
Q ss_pred EEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCC
Q 024201 112 ILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDS 152 (271)
Q Consensus 112 vL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~ 152 (271)
|++|+ ..|||.|+.....|.+ .|+.+-.+.+|.
T Consensus 6 v~ly~-~~~Cp~C~~~~~~L~~-------~~i~~~~~~vd~ 38 (89)
T 3msz_A 6 VKIYT-RNGCPYCVWAKQWFEE-------NNIAFDETIIDD 38 (89)
T ss_dssp EEEEE-CTTCHHHHHHHHHHHH-------TTCCCEEEECCS
T ss_pred EEEEE-cCCChhHHHHHHHHHH-------cCCCceEEEeec
Confidence 55566 7999999876655533 355544445554
No 271
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=93.66 E-value=0.081 Score=38.19 Aligned_cols=35 Identities=11% Similarity=0.153 Sum_probs=24.6
Q ss_pred EEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCH
Q 024201 111 VILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSV 153 (271)
Q Consensus 111 vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~ 153 (271)
.|++|+ ..|||+|.....-|.++ |+.+.-|.++..
T Consensus 17 ~v~vy~-~~~Cp~C~~ak~~L~~~-------~i~y~~idI~~~ 51 (99)
T 3qmx_A 17 KIEIYT-WSTCPFCMRALALLKRK-------GVEFQEYCIDGD 51 (99)
T ss_dssp CEEEEE-CTTCHHHHHHHHHHHHH-------TCCCEEEECTTC
T ss_pred CEEEEE-cCCChhHHHHHHHHHHC-------CCCCEEEEcCCC
Confidence 355666 79999999887776543 566666666653
No 272
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=93.60 E-value=0.91 Score=39.01 Aligned_cols=38 Identities=13% Similarity=0.114 Sum_probs=25.9
Q ss_pred EEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCC
Q 024201 111 VILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTD 151 (271)
Q Consensus 111 vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d 151 (271)
+.|..|...+||+|.....-|.++..+ .++..+.+.++
T Consensus 44 ~~VelyTs~gCp~C~~Ak~lL~~~~~~---~~vi~l~~~v~ 81 (270)
T 2axo_A 44 GVVELFTSQGCASCPPADEALRKMIQK---GDVVGLSYHVD 81 (270)
T ss_dssp CEEEEEECTTCTTCHHHHHHHHHHHHH---TSSEEEEEECS
T ss_pred cEEEEEeCCCCCChHHHHHHHHHhhcc---CCeeeEEEEEE
Confidence 344444489999999888888877654 35655566554
No 273
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=93.44 E-value=0.24 Score=41.33 Aligned_cols=39 Identities=8% Similarity=0.326 Sum_probs=34.4
Q ss_pred CcccceEEcCChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEE
Q 024201 171 DLKYPLIADITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHST 215 (271)
Q Consensus 171 ~~~f~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~ 215 (271)
++.+....+.+.++++.||+. ..|+.+|+++||++....
T Consensus 184 ~i~v~~~~~~~~~l~~~f~v~------~~Pslvl~~~~g~~~~~~ 222 (244)
T 3q6o_A 184 GVAVRRVLNTEANVVRKFGVT------DFPSCYLLFRNGSVSRVP 222 (244)
T ss_dssp TEEEEEEETTCHHHHHHHTCC------CSSEEEEEETTSCEEECC
T ss_pred ceEEEEEeCchHHHHHHcCCC------CCCeEEEEeCCCCeEeec
Confidence 456777778889999999999 889999999999999885
No 274
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=93.32 E-value=0.24 Score=41.37 Aligned_cols=42 Identities=2% Similarity=-0.079 Sum_probs=28.6
Q ss_pred cCCcEEEEEEecCCCCCChHHHHHHH-HHHHHHHHh-cCcEEEEEe
Q 024201 106 IGKKYVILFFYPLDFTFVCPTEITAF-SDRYTEFEK-LNTEILGVS 149 (271)
Q Consensus 106 ~gkk~vvL~F~~~t~Cp~C~~~l~~L-~~~~~~~~~-~gv~vv~VS 149 (271)
.++ ++|+.|+ --.||+|....+.+ .++.++|.+ ..|.++...
T Consensus 38 ~A~-vtIvef~-Dy~CP~C~~~~~~~~~~l~~~~~~~g~V~~v~~~ 81 (226)
T 3f4s_A 38 KAP-ILMIEYA-SLTCYHCSLFHRNVFPKIKEKYIDTGKMLYIFRH 81 (226)
T ss_dssp TCS-EEEEEEE-CTTCHHHHHHHHHTHHHHHHHHTTTTSEEEEEEE
T ss_pred CCC-EEEEEEE-CCCCHHHHHHHHHHHHHHHHHcccCCeEEEEEEe
Confidence 455 6777777 45599999888764 667777743 347766643
No 275
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=93.27 E-value=0.036 Score=44.75 Aligned_cols=39 Identities=13% Similarity=-0.044 Sum_probs=31.0
Q ss_pred CCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeC
Q 024201 107 GKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVST 150 (271)
Q Consensus 107 gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~ 150 (271)
++ ++|+.|| .-|||+|....|.+.++.+++ ++.+.-+.+
T Consensus 22 ~~-~~vvef~-d~~Cp~C~~~~~~~~~~~~~~---~v~~~~~p~ 60 (185)
T 3feu_A 22 GM-APVTEVF-ALSCGHCRNMENFLPVISQEA---GTDIGKMHI 60 (185)
T ss_dssp CC-CSEEEEE-CTTCHHHHHHGGGHHHHHHHH---TSCCEEEEC
T ss_pred CC-CEEEEEE-CCCChhHHHhhHHHHHHHHHh---CCeEEEEec
Confidence 44 7889999 789999999999999998888 455555544
No 276
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=93.20 E-value=0.032 Score=45.15 Aligned_cols=40 Identities=5% Similarity=0.079 Sum_probs=30.3
Q ss_pred EEEEEEecCCCCCChHHHHHHH---HHHHHHHHhcCcEEEEEeCC
Q 024201 110 YVILFFYPLDFTFVCPTEITAF---SDRYTEFEKLNTEILGVSTD 151 (271)
Q Consensus 110 ~vvL~F~~~t~Cp~C~~~l~~L---~~~~~~~~~~gv~vv~VS~d 151 (271)
++|+.|| ..|||+|....+.+ .++.+++.+ ++.++-+.+.
T Consensus 16 ~~vvef~-d~~Cp~C~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~ 58 (189)
T 3l9v_A 16 PAVVEFF-SFYCPPCYAFSQTMGVDQAIRHVLPQ-GSRMVKYHVS 58 (189)
T ss_dssp CSEEEEE-CTTCHHHHHHHHTSCHHHHHHTTCCT-TCCEEEEECS
T ss_pred CEEEEEE-CCCChhHHHHhHhccchHHHHHhCCC-CCEEEEEech
Confidence 7889999 89999999998886 456555554 5777776553
No 277
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=91.73 E-value=0.18 Score=35.12 Aligned_cols=33 Identities=6% Similarity=0.141 Sum_probs=22.8
Q ss_pred EEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCC
Q 024201 112 ILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDS 152 (271)
Q Consensus 112 vL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~ 152 (271)
|+.|+ ..|||.|+...+.|.+ .|+.+..+.++.
T Consensus 8 v~ly~-~~~C~~C~~~~~~L~~-------~~i~~~~~di~~ 40 (92)
T 2khp_A 8 VIIYT-RPGCPYCARAKALLAR-------KGAEFNEIDASA 40 (92)
T ss_dssp EEEEE-CTTCHHHHHHHHHHHH-------TTCCCEEEESTT
T ss_pred EEEEE-CCCChhHHHHHHHHHH-------cCCCcEEEECCC
Confidence 55666 7999999976665543 367766676663
No 278
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=90.85 E-value=0.47 Score=34.47 Aligned_cols=35 Identities=11% Similarity=-0.023 Sum_probs=23.9
Q ss_pred EEEEEEecC----CCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCC
Q 024201 110 YVILFFYPL----DFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDS 152 (271)
Q Consensus 110 ~vvL~F~~~----t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~ 152 (271)
.++|++. + .|||+|......|.+ .|+.+.-|.++.
T Consensus 16 ~vvvy~~-g~~~~~~Cp~C~~ak~~L~~-------~~i~~~~vdi~~ 54 (109)
T 1wik_A 16 SVMLFMK-GNKQEAKCGFSKQILEILNS-------TGVEYETFDILE 54 (109)
T ss_dssp SEEEEES-STTTCCCSSTHHHHHHHHHH-------TCSCEEEEESSS
T ss_pred CEEEEEe-cCCCCCCCchHHHHHHHHHH-------cCCCeEEEECCC
Confidence 3555444 4 899999977666543 478877777765
No 279
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=90.70 E-value=2 Score=35.19 Aligned_cols=91 Identities=9% Similarity=0.007 Sum_probs=57.0
Q ss_pred EEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHHHhC
Q 024201 110 YVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYG 189 (271)
Q Consensus 110 ~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~yg 189 (271)
.++|.|. ..||+.|...++.+.++.++++++ +.++.|..+... .+.+.+.||
T Consensus 133 ~~~l~f~-~~~~~~~~~~~~~~~~vAk~~k~~-i~F~~vd~~~~~--------------------------~~~~l~~fg 184 (227)
T 4f9z_D 133 IHLLLIM-NKASPEYEENMHRYQKAAKLFQGK-ILFILVDSGMKE--------------------------NGKVISFFK 184 (227)
T ss_dssp EEEEEEE-CTTSTTHHHHHHHHHHHHHHTTTT-CEEEEEETTSGG--------------------------GHHHHHHTT
T ss_pred eEEEEEE-cCCcchHHHHHHHHHHHHHHhhCC-EEEEEeCCccHh--------------------------HHHHHHHcC
Confidence 4445555 568999999999999999998864 666666655311 123445567
Q ss_pred CccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHH
Q 024201 190 VLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 190 v~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l 235 (271)
+... ..|...|++..+..++.. .. ..-..+.+.+.++.+
T Consensus 185 l~~~----~~P~~~i~~~~~~~ky~~-~~--~~~t~~~i~~Fv~~~ 223 (227)
T 4f9z_D 185 LKES----QLPALAIYQTLDDEWDTL-PT--AEVSVEHVQNFCDGF 223 (227)
T ss_dssp CCGG----GCSEEEEEESSSCCEEEE-TT--CCCCHHHHHHHHHHH
T ss_pred CCcc----cCCEEEEEECCCCccccC-Cc--CCCCHHHHHHHHHHH
Confidence 6521 468888988665544443 11 123567777776654
No 280
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=90.10 E-value=3.1 Score=38.65 Aligned_cols=96 Identities=17% Similarity=0.209 Sum_probs=61.6
Q ss_pred CCCCCCCCCeEEeeecCCCceeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHH
Q 024201 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHL 157 (271)
Q Consensus 78 ~~~G~~~Pdf~l~~~~~~~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~ 157 (271)
..+|..+|+.-+. .+|+.+++-|+-|...+||.+- . . ........+..++ .|+.+-.+.+..
T Consensus 420 ~~pG~r~p~~~l~----~~~~~~~~~dl~g~~f~ll~~~-~---~--~~~~~~~~~~~~~---~~~~~~~~~~~~----- 481 (535)
T 3ihg_A 420 GRPGFRGPHVLVS----RHGERLSTVDLFGDGWTLLAGE-L---G--ADWVAAAEAVSAE---LGVPVRAYRVGA----- 481 (535)
T ss_dssp CCTTSBCCCCEEE----ETTEEEEGGGGCSSSEEEEECT-T---C--HHHHHHHHHHHHH---HTCCEEEEEBTT-----
T ss_pred CCCCCcCCCceee----cCCceeeHHHhcCCceEEEecC-C---c--cHHHHHHHHHHHh---cCCceEEEEeCC-----
Confidence 5689999999984 3567889999989877776532 1 1 1111122222333 354444443322
Q ss_pred HHHHHhhhcCCCCCcccceEEcCChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEe
Q 024201 158 AWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTI 216 (271)
Q Consensus 158 ~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~ 216 (271)
. +.|..+.+++.||+. -...+||-+||.|-++.-
T Consensus 482 -------------~-----~~d~~~~~~~~~~~~-------~~~~~lvRPD~~va~r~~ 515 (535)
T 3ihg_A 482 -------------G-----LTDPESAVSERYGIG-------KAGASLVRPDGIVAWRTD 515 (535)
T ss_dssp -------------T-----BBCSSCCHHHHHTCT-------TTCEEEECTTSBEEEEES
T ss_pred -------------c-----cccCcchHHHHhCCC-------CCceEeeCCCceeEEecC
Confidence 1 246678899999987 234799999999999963
No 281
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=89.03 E-value=4.2 Score=39.21 Aligned_cols=139 Identities=12% Similarity=0.088 Sum_probs=76.6
Q ss_pred CCCCCCCCCeEEeeecCCCceeEeccccc---CCcEEEEEEecCCCCCChHHHHHHHHHHHHHHH---------------
Q 024201 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYI---GKKYVILFFYPLDFTFVCPTEITAFSDRYTEFE--------------- 139 (271)
Q Consensus 78 ~~~G~~~Pdf~l~~~~~~~g~~v~Lsd~~---gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~--------------- 139 (271)
+.+|..+|++.+.. ..+|+.+.|.++. |+ ++||.|- +.-. .......+.++.+.+.
T Consensus 479 ~~~G~r~p~~~~~~--~~~g~~~~l~~~l~~~g~-~~ll~~~-~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 552 (665)
T 1pn0_A 479 CVVGTRFKSQPVVR--HSEGLWMHFGDRLVTDGR-FRIIVFA-GKAT--DATQMSRIKKFAAYLDSENSVISRYTPKGAD 552 (665)
T ss_dssp SCTTSBCCCCEEEE--TTTTEEEEGGGGCCCSSC-EEEEEEE-ECTT--SHHHHHHHHHHHHHHHSTTSHHHHHSBTTSC
T ss_pred CCCcCCCCCCeEEe--cCCCcEEEHhHhhccCCC-EEEEEec-CCcc--cchhHHHHHHHHHHhhccccHHhhcCCcccC
Confidence 56899999999862 3467789998854 44 8888876 3311 1122233444444432
Q ss_pred -hcCcEEEEEeCCCHHHHHHHHHHhhh-cCCCC-CcccceEEcC------ChHHHHHhCCccCCCCccceEEEEEcCCCc
Q 024201 140 -KLNTEILGVSTDSVFSHLAWVQTDRK-SGGLG-DLKYPLIADI------TKSISKSYGVLIPDQGIALRGLFIIDKEGV 210 (271)
Q Consensus 140 -~~gv~vv~VS~d~~~~~~~~~~~~~~-~~~~~-~~~f~~l~D~------~~~~~~~ygv~~~~~g~~~P~~~lID~~G~ 210 (271)
+.-++++.|........ ++. .... ..... .+ +.++.|. .+.+.+.||+... .-..+||-+||-
T Consensus 553 ~~~~~~~~~i~~~~~~~~-~~~-~~p~~~~~~~~~~-~~~~~d~~~~~~~~~~~~~~~g~~~~-----~g~~vlvRPD~y 624 (665)
T 1pn0_A 553 RNSRIDVITIHSCHRDDI-EMH-DFPAPALHPKWQY-DFIYADCDSWHHPHPKSYQAWGVDET-----KGAVVVVRPDGY 624 (665)
T ss_dssp TTSSEEEEEEESSCTTSC-CGG-GSCTTTTSCTTCC-SSEEECSCCSSSCCCCHHHHHTBCTT-----TCEEEEECTTSB
T ss_pred ccceeEEEEEecCCCCcc-chh-hCCHHHcCcccch-heEeecCcccccccccHHHHcCCCCC-----CceEEEECCCCc
Confidence 11277777743321110 000 0000 00000 11 2455662 4679999998621 345799999999
Q ss_pred EEEEEeccCCCCCCHHHHHHHHHHH
Q 024201 211 IQHSTINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 211 V~~~~~~~~~~~~~~~e~l~~l~~l 235 (271)
|-++.- ....+++.+.+..+
T Consensus 625 V~~~~~-----~~~~~~l~~~~~~~ 644 (665)
T 1pn0_A 625 TSLVTD-----LEGTAEIDRYFSGI 644 (665)
T ss_dssp EEEEEC-----TTTHHHHHHHHHTT
T ss_pred EEEEec-----cccHHHHHHHHHHH
Confidence 998842 23466677776654
No 282
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=87.72 E-value=4.9 Score=38.47 Aligned_cols=141 Identities=11% Similarity=0.044 Sum_probs=75.7
Q ss_pred CCCCCCCCCeEEeeecCCCceeEeccccc---CCcEEEEEEecCCCCCChH-HHHHHHHHHH--------HHHHhc----
Q 024201 78 PLVGNTAPDFAAEAVFDQEFINVKLSDYI---GKKYVILFFYPLDFTFVCP-TEITAFSDRY--------TEFEKL---- 141 (271)
Q Consensus 78 ~~~G~~~Pdf~l~~~~~~~g~~v~Lsd~~---gkk~vvL~F~~~t~Cp~C~-~~l~~L~~~~--------~~~~~~---- 141 (271)
+.+|..+|++.+.. ..+|+.+.|.++. |+ ++||.|- +.-.+.+. ..+..+.+.. ..|...
T Consensus 467 ~~~G~r~p~~~~~~--~~~g~~~~l~~~~~~~g~-~~ll~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 542 (639)
T 2dkh_A 467 FTVGMRFHSAPVVR--VCDAKPVQLGHCGKADGR-WRLYAFA-AQNDLAQPESGLLALCRFLEGDAASPLRRFTPAGQDI 542 (639)
T ss_dssp SCTTSBCCCCEEEE--TTTCCEEEGGGGCCSSSC-EEEEEEC-CTTTTTCTTSHHHHHHHHHHHCTTCHHHHHSCTTSCT
T ss_pred CCCcCCCCCCeEEe--cCCCCEEEHHHhhccCCC-EEEEEec-CCCCchhhHHHHHHHHHHHhhCCccHHHhcCCCCCCc
Confidence 56899999999862 3467788998854 44 8888875 44333343 3333443332 233211
Q ss_pred --CcEEEEEeCCCHHH--HHHH---HHHhhhcCCCCCcccceEEcCC----hHHHHHhCCccCCCCccceEEEEEcCCCc
Q 024201 142 --NTEILGVSTDSVFS--HLAW---VQTDRKSGGLGDLKYPLIADIT----KSISKSYGVLIPDQGIALRGLFIIDKEGV 210 (271)
Q Consensus 142 --gv~vv~VS~d~~~~--~~~~---~~~~~~~~~~~~~~f~~l~D~~----~~~~~~ygv~~~~~g~~~P~~~lID~~G~ 210 (271)
=++++.|......+ ...+ ........+..++ +.++.|.. +.+.+.||+... .-..+||-+||-
T Consensus 543 ~~~~~~~~i~~~~~~~~~~~~~p~~~~~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~~g~~~~-----~g~~v~vRPD~y 616 (639)
T 2dkh_A 543 DSIFDLRAVFPQAYTEVALETLPALLLPPKGQLGMIDY-EKVFSPDLKNAGQDIFELRGIDRQ-----QGALVVVRPDQY 616 (639)
T ss_dssp TSSEEEEEECSSCGGGCCGGGSCGGGSCEETTTTEECC-CSEEECCCSSTTCCHHHHTTBCTT-----TCEEEEECTTSB
T ss_pred CceEEEEEEecCCCCccchhhCcHhhCCcccccccccc-eeEEeCCCcccccchHHHhCCCCC-----ceEEEEECCCCc
Confidence 26777774432111 1111 0100000010011 34566632 568999998521 345799999999
Q ss_pred EEEEEeccCCCCCCHHHHHHHHH
Q 024201 211 IQHSTINNLAIGRSVDETLRTLQ 233 (271)
Q Consensus 211 V~~~~~~~~~~~~~~~e~l~~l~ 233 (271)
|-.+.- ..+.+++.+.+.
T Consensus 617 v~~~~~-----~~~~~~l~~~~~ 634 (639)
T 2dkh_A 617 VAQVLP-----LGDHAALSAYFE 634 (639)
T ss_dssp EEEEEC-----TTCHHHHHHHHH
T ss_pred eEEeec-----hhhHHHHHHHHH
Confidence 988742 234555655554
No 283
>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12
Probab=85.94 E-value=2.3 Score=31.54 Aligned_cols=63 Identities=6% Similarity=-0.045 Sum_probs=41.3
Q ss_pred EecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCC----CHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHHHhCC
Q 024201 115 FYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTD----SVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGV 190 (271)
Q Consensus 115 F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d----~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ygv 190 (271)
+|...+|+.|+....-|. ++|+.+..+... +.+++.+|.+.. +.++.-+....+...+.++.
T Consensus 4 iY~~~~C~~c~ka~~~L~-------~~gi~~~~~di~~~~~~~~el~~~l~~~-------~~~~~~l~n~~~~~~k~l~~ 69 (120)
T 3l78_A 4 LFLSPSCTSCRKARAWLN-------RHDVVFQEHNIMTSPLSRDELLKILSYT-------ENGTEDIISTRSKVFQKLDI 69 (120)
T ss_dssp EEECSSCHHHHHHHHHHH-------HTTCCEEEEETTTSCCCHHHHHHHHHHC-------SSTHHHHBCTTCHHHHHTTC
T ss_pred EEeCCCCHHHHHHHHHHH-------HcCCCeEEEecccCCCcHHHHHHHHhhc-------CCCHHHhhcCCcHHHHHcCC
Confidence 343788999987765553 457777666553 356777887765 44555555566777777775
Q ss_pred c
Q 024201 191 L 191 (271)
Q Consensus 191 ~ 191 (271)
.
T Consensus 70 ~ 70 (120)
T 3l78_A 70 D 70 (120)
T ss_dssp C
T ss_pred C
Confidence 4
No 284
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=85.04 E-value=1.1 Score=35.36 Aligned_cols=42 Identities=5% Similarity=-0.038 Sum_probs=32.0
Q ss_pred CCcEEEEEEecCCCCCChHHHHHHH-HHHHHHHHhcCcEEEEEeCC
Q 024201 107 GKKYVILFFYPLDFTFVCPTEITAF-SDRYTEFEKLNTEILGVSTD 151 (271)
Q Consensus 107 gkk~vvL~F~~~t~Cp~C~~~l~~L-~~~~~~~~~~gv~vv~VS~d 151 (271)
++ +++|.|| .-.||.|....+.+ .++.+++.. .+.+..+..+
T Consensus 17 ~~-~~~ief~-d~~CP~C~~~~~~l~~~l~~~~~~-~v~~~~~~l~ 59 (195)
T 3c7m_A 17 AD-KTLIKVF-SYACPFCYKYDKAVTGPVSEKVKD-IVAFTPFHLE 59 (195)
T ss_dssp CT-TEEEEEE-CTTCHHHHHHHHHTHHHHHHHTTT-TCEEEEEECT
T ss_pred CC-cEEEEEE-eCcCcchhhCcHHHHHHHHHhCCC-ceEEEEEecC
Confidence 44 6788888 58899999998888 888777753 4777776654
No 285
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=84.56 E-value=1.7 Score=32.82 Aligned_cols=65 Identities=6% Similarity=-0.013 Sum_probs=40.9
Q ss_pred EEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCC----HHHHHHHHHHhhhcCCCCCcccceEEcCChHHHHH
Q 024201 112 ILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDS----VFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKS 187 (271)
Q Consensus 112 vL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~----~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ 187 (271)
|.+|. ..+||.|+.....|.+ .|+.+..+.++. .+++.+|.+.. +.++.-+....+..++.
T Consensus 3 i~lY~-~~~C~~C~ka~~~L~~-------~gi~y~~~di~~~~~~~~el~~~l~~~-------~~~~~~l~n~~~~~~k~ 67 (132)
T 1z3e_A 3 VTLYT-SPSCTSCRKARAWLEE-------HEIPFVERNIFSEPLSIDEIKQILRMT-------EDGTDEIISTRSKVFQK 67 (132)
T ss_dssp EEEEE-CTTCHHHHHHHHHHHH-------TTCCEEEEETTTSCCCHHHHHHHHHTC-------SSCGGGTBCTTSHHHHH
T ss_pred EEEEe-CCCChHHHHHHHHHHH-------cCCceEEEEccCCCccHHHHHHHHHHc-------CCCHHHhhcCCchHHHh
Confidence 33444 7899999877665543 477776666542 35566776644 34555555566777777
Q ss_pred hCCc
Q 024201 188 YGVL 191 (271)
Q Consensus 188 ygv~ 191 (271)
++..
T Consensus 68 l~~~ 71 (132)
T 1z3e_A 68 LNVN 71 (132)
T ss_dssp HCCC
T ss_pred cCcc
Confidence 7754
No 286
>3ktb_A Arsenical resistance operon trans-acting represso; alpha-beta-alpha sandwich, helix-turn-helix, structural GENO PSI-2; 2.10A {Bacteroides vulgatus}
Probab=84.39 E-value=3.9 Score=29.84 Aligned_cols=89 Identities=15% Similarity=0.145 Sum_probs=59.1
Q ss_pred EEEEecCCCCC--Ch----HHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHH
Q 024201 112 ILFFYPLDFTF--VC----PTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSIS 185 (271)
Q Consensus 112 vL~F~~~t~Cp--~C----~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~ 185 (271)
|-+|=|+-||+ .| ..++-++....+.++++|++|-=.+... +-.+|.+.. .-.++.
T Consensus 7 i~ifepamCCstGvCG~~vd~eL~~~~~~~~~lk~~Gi~V~RyNL~~--~P~~F~~N~----------------~V~~~L 68 (106)
T 3ktb_A 7 IEIFDPAMCCPTGLCGTNINPELMRIAVVIESLKKQGIIVTRHNLRD--EPQVYVSNK----------------TVNDFL 68 (106)
T ss_dssp EEEEECSCSSTTSCSSSCCCHHHHHHHHHHHHHHHTTCCCEEEETTT--CTTHHHHSH----------------HHHHHH
T ss_pred EEEechhhccCCCCcCCCCCHHHHHHHHHHHHHHHCCCEEEEEcccc--ChHHHhcCH----------------HHHHHH
Confidence 56788899997 56 3778899999999999998877766654 223444432 014566
Q ss_pred HHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHH
Q 024201 186 KSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTL 232 (271)
Q Consensus 186 ~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l 232 (271)
+.+|+. .+|.+ +| ||+|+..-.+ ...+|+.+.+
T Consensus 69 ~~~G~~------~LP~~-~V--DGevv~~G~y-----Pt~eEl~~~l 101 (106)
T 3ktb_A 69 QKHGAD------ALPIT-LV--DGEIAVSQTY-----PTTKQMSEWT 101 (106)
T ss_dssp HTTCGG------GCSEE-EE--TTEEEECSSC-----CCHHHHHHHH
T ss_pred HHcCcc------cCCEE-EE--CCEEEEeccC-----CCHHHHHHHh
Confidence 677877 67765 55 6999887322 2456665554
No 287
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=84.28 E-value=3.3 Score=30.00 Aligned_cols=45 Identities=13% Similarity=-0.026 Sum_probs=24.9
Q ss_pred EEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHH
Q 024201 112 ILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLA 158 (271)
Q Consensus 112 vL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~ 158 (271)
|++|. .++||.|..- ..-+++...|+++|+.+.-|.++.....++
T Consensus 10 V~vy~-~~~C~~C~~~-~~~~~ak~~L~~~gi~y~~vdI~~~~~~~~ 54 (111)
T 2ct6_A 10 IRVFI-ASSSGFVAIK-KKQQDVVRFLEANKIEFEEVDITMSEEQRQ 54 (111)
T ss_dssp EEEEE-CSSCSCHHHH-HHHHHHHHHHHHTTCCEEEEETTTCHHHHH
T ss_pred EEEEE-cCCCCCcccc-hhHHHHHHHHHHcCCCEEEEECCCCHHHHH
Confidence 44445 6899999831 011122223445688888888775433333
No 288
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=83.98 E-value=1.9 Score=29.61 Aligned_cols=31 Identities=6% Similarity=-0.060 Sum_probs=21.0
Q ss_pred EEEecCC----CCCChHHHHHHHHHHHHHHHhcCcEEEEEeCC
Q 024201 113 LFFYPLD----FTFVCPTEITAFSDRYTEFEKLNTEILGVSTD 151 (271)
Q Consensus 113 L~F~~~t----~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d 151 (271)
++|. .+ |||.|.....-|. ++|+.+-.|.++
T Consensus 3 ~iY~-~~~~~~~Cp~C~~ak~~L~-------~~gi~y~~idI~ 37 (87)
T 1aba_A 3 KVYG-YDSNIHKCGPCDNAKRLLT-------VKKQPFEFINIM 37 (87)
T ss_dssp EEEE-CCTTTSCCHHHHHHHHHHH-------HTTCCEEEEESC
T ss_pred EEEE-eCCCCCcCccHHHHHHHHH-------HcCCCEEEEEee
Confidence 4455 68 9999986655443 347777777776
No 289
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=83.75 E-value=1.1 Score=38.55 Aligned_cols=41 Identities=15% Similarity=0.133 Sum_probs=30.7
Q ss_pred cCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCC
Q 024201 106 IGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTD 151 (271)
Q Consensus 106 ~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d 151 (271)
.|+ .+|+.|+ -..||+|+...+.+.+..+. -.|.++.+..-
T Consensus 146 ~gk-~~I~vFt-Dp~CPYCkkl~~~l~~~l~~---~~Vr~i~~Pil 186 (273)
T 3tdg_A 146 NKD-KILYIVS-DPMCPHCQKELTKLRDHLKE---NTVRMVVVGWL 186 (273)
T ss_dssp GTT-CEEEEEE-CTTCHHHHHHHHTHHHHHHH---CEEEEEECCCS
T ss_pred CCC-eEEEEEE-CcCChhHHHHHHHHHHHhhC---CcEEEEEeecc
Confidence 355 6888888 67799999999999876653 35777776654
No 290
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=83.72 E-value=3.3 Score=28.75 Aligned_cols=38 Identities=5% Similarity=-0.037 Sum_probs=21.2
Q ss_pred EEEEecCCCCCChH--HHHHHHHHHHHHHHhcCcEEEEEeCCCH
Q 024201 112 ILFFYPLDFTFVCP--TEITAFSDRYTEFEKLNTEILGVSTDSV 153 (271)
Q Consensus 112 vL~F~~~t~Cp~C~--~~l~~L~~~~~~~~~~gv~vv~VS~d~~ 153 (271)
|+.|. .++||.|. ..-....+ -++++|+.+.-|.++..
T Consensus 4 v~ly~-~~~C~~c~~~~~~~~ak~---~L~~~~i~~~~~di~~~ 43 (93)
T 1t1v_A 4 LRVYS-TSVTGSREIKSQQSEVTR---ILDGKRIQYQLVDISQD 43 (93)
T ss_dssp EEEEE-CSSCSCHHHHHHHHHHHH---HHHHTTCCCEEEETTSC
T ss_pred EEEEE-cCCCCCchhhHHHHHHHH---HHHHCCCceEEEECCCC
Confidence 33445 68999994 11112222 23455787777777653
No 291
>3kgk_A Arsenical resistance operon trans-acting represso; alpha+beta, chaperone, DNA-binding, RE transcription, transcription regulation; 1.40A {Escherichia coli} PDB: 3mwh_A
Probab=83.14 E-value=5.3 Score=29.37 Aligned_cols=90 Identities=18% Similarity=0.237 Sum_probs=54.8
Q ss_pred EEEEecCCCCC--ChH----HHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHH
Q 024201 112 ILFFYPLDFTF--VCP----TEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSIS 185 (271)
Q Consensus 112 vL~F~~~t~Cp--~C~----~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~ 185 (271)
|-+|=++-||+ .|- .++-++....+.++++|++|-=.+... +-.+|.+.- .-.++.
T Consensus 4 i~ifepamCCstGvCG~~vd~~L~~~~~~~~~lk~~Gi~V~RyNL~~--~P~aF~~N~----------------~V~~~L 65 (110)
T 3kgk_A 4 LMVFDPAMAASTGVCGTDVDQALVDFSTDVQWLKQSGVQIERFNLAQ--QPMSFVQNE----------------KVKAFI 65 (110)
T ss_dssp EEEEECC-------------CHHHHHHHHHHHHHHHTCCEEEEETTT--CTTHHHHSH----------------HHHHHH
T ss_pred eEEecchhccccCCcCCCCCHHHHHHHHHHHHHHHCCCeEEEEcccc--ChHHHhcCH----------------HHHHHH
Confidence 55677888886 574 557788888888999998888776654 223455432 114667
Q ss_pred HHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHH
Q 024201 186 KSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQ 233 (271)
Q Consensus 186 ~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~ 233 (271)
+.+|+. .+|.+ +| ||+|+..-.+ ...+|+.+.+.
T Consensus 66 ~~~G~~------~LP~~-~V--DGevv~~G~y-----Pt~eEl~~~lg 99 (110)
T 3kgk_A 66 EASGAE------GLPLL-LL--DGETVMAGRY-----PKRAELARWFG 99 (110)
T ss_dssp HHHCGG------GCCEE-EE--TTEEEEESSC-----CCHHHHHHHHT
T ss_pred HHcCcc------cCCEE-EE--CCEEEEeccC-----CCHHHHHHHhC
Confidence 778888 77765 55 6999987322 24566666553
No 292
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=82.16 E-value=0.89 Score=34.71 Aligned_cols=34 Identities=9% Similarity=0.010 Sum_probs=21.9
Q ss_pred EEEEEEecC----CCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCC
Q 024201 110 YVILFFYPL----DFTFVCPTEITAFSDRYTEFEKLNTEILGVSTD 151 (271)
Q Consensus 110 ~vvL~F~~~----t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d 151 (271)
.++|+.. + .|||+|......|. +.|+.+..|.++
T Consensus 36 ~Vvvy~k-s~~~~~~Cp~C~~ak~~L~-------~~gv~y~~vdI~ 73 (135)
T 2wci_A 36 PILLYMK-GSPKLPSCGFSAQAVQALA-------ACGERFAYVDIL 73 (135)
T ss_dssp SEEEEES-BCSSSBSSHHHHHHHHHHH-------TTCSCCEEEEGG
T ss_pred CEEEEEE-ecCCCCCCccHHHHHHHHH-------HcCCceEEEECC
Confidence 3555554 4 69999987665553 346776666665
No 293
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=81.25 E-value=4.9 Score=29.70 Aligned_cols=35 Identities=11% Similarity=0.074 Sum_probs=21.1
Q ss_pred EEEEEEecCC----CCCChHHHHHHHHHHHHHHHhcCcE---EEEEeCCC
Q 024201 110 YVILFFYPLD----FTFVCPTEITAFSDRYTEFEKLNTE---ILGVSTDS 152 (271)
Q Consensus 110 ~vvL~F~~~t----~Cp~C~~~l~~L~~~~~~~~~~gv~---vv~VS~d~ 152 (271)
.|+|+-- .+ |||+|.....-|.+. |+. +.-+.++.
T Consensus 17 ~Vvvfsk-~t~~~p~Cp~C~~ak~lL~~~-------gv~~~~~~~~dv~~ 58 (121)
T 3gx8_A 17 PVVLFMK-GTPEFPKCGFSRATIGLLGNQ-------GVDPAKFAAYNVLE 58 (121)
T ss_dssp SEEEEES-BCSSSBCTTHHHHHHHHHHHH-------TBCGGGEEEEECTT
T ss_pred CEEEEEe-ccCCCCCCccHHHHHHHHHHc-------CCCcceEEEEEecC
Confidence 3554444 43 999998876666542 555 55555553
No 294
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=80.61 E-value=3.4 Score=30.65 Aligned_cols=63 Identities=11% Similarity=0.229 Sum_probs=41.5
Q ss_pred EEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeC--C--CHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHHHhC
Q 024201 114 FFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVST--D--SVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYG 189 (271)
Q Consensus 114 ~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~--d--~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~yg 189 (271)
.+|...+|+.|+....-|. ++|+.+-.+.. + +.+++.+|.+.. +.++.-+....+...+.++
T Consensus 6 ~iY~~~~C~~c~ka~~~L~-------~~gi~~~~~di~~~~~~~~eL~~~l~~~-------g~~~~~l~n~~~~~~k~l~ 71 (120)
T 3fz4_A 6 TFYEYPKCSTCRRAKAELD-------DLAWDYDAIDIKKNPPAASLIRNWLENS-------GLELKKFFNTSGQSYRALG 71 (120)
T ss_dssp EEEECSSCHHHHHHHHHHH-------HHTCCEEEEETTTSCCCHHHHHHHHHHS-------CCCGGGGBCTTSHHHHHTT
T ss_pred EEEeCCCChHHHHHHHHHH-------HcCCceEEEEeccCchhHHHHHHHHHHc-------CCCHHHHhCCCCcchhhcC
Confidence 3444788999988766554 34776666654 3 456778888876 4455555556677777776
Q ss_pred C
Q 024201 190 V 190 (271)
Q Consensus 190 v 190 (271)
+
T Consensus 72 l 72 (120)
T 3fz4_A 72 L 72 (120)
T ss_dssp H
T ss_pred c
Confidence 5
No 295
>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0
Probab=79.02 E-value=3.2 Score=30.80 Aligned_cols=62 Identities=16% Similarity=0.166 Sum_probs=40.9
Q ss_pred EecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeC--C--CHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHHHhCC
Q 024201 115 FYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVST--D--SVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGV 190 (271)
Q Consensus 115 F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~--d--~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ygv 190 (271)
+|...+|+.|+....-|. ++|+.+-.+.. + +.+++.+|.+.. +.++.-+....+..++.+++
T Consensus 8 iY~~p~C~~c~ka~~~L~-------~~gi~~~~~di~~~~~~~~eL~~~l~~~-------g~~~~~l~n~~~~~~k~l~l 73 (120)
T 3gkx_A 8 FLQYPACSTCQKAKKWLI-------ENNIEYTNRLIVDDNPTVEELKAWIPLS-------GLPVKKFFNTSGVVYKELKL 73 (120)
T ss_dssp EEECTTCHHHHHHHHHHH-------HTTCCCEEEETTTTCCCHHHHHHHHHHH-------TSCGGGGBCTTSHHHHHTTH
T ss_pred EEECCCChHHHHHHHHHH-------HcCCceEEEecccCcCCHHHHHHHHHHc-------CCCHHHeEeCCCchhhhcCc
Confidence 343788999988766554 45766655544 3 456778888877 44555555566777777764
No 296
>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}
Probab=78.25 E-value=5.4 Score=29.55 Aligned_cols=64 Identities=11% Similarity=-0.061 Sum_probs=41.2
Q ss_pred EEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCC----CHHHHHHHHHHhhhcCCCCCc-ccceEEcCChHHHHHh
Q 024201 114 FFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTD----SVFSHLAWVQTDRKSGGLGDL-KYPLIADITKSISKSY 188 (271)
Q Consensus 114 ~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d----~~~~~~~~~~~~~~~~~~~~~-~f~~l~D~~~~~~~~y 188 (271)
.+|...+|+.|+....-| +++|+.+-.+... +.+++..|.+.. +. +..-+....+..++.+
T Consensus 8 ~iY~~p~C~~c~ka~~~L-------~~~gi~~~~~di~~~~~~~~eL~~~l~~~-------g~~~~~~l~n~~~~~~k~l 73 (121)
T 3rdw_A 8 TIYHNPRCSKSRETLALV-------EQQGITPQVVLYLETPPSVDKLKELLQQL-------GFSDARQLMRTKEDLYKTL 73 (121)
T ss_dssp EEECCTTCHHHHHHHHHH-------HTTTCCCEEECTTTSCCCHHHHHHHHHHT-------TCSSGGGGBCTTSHHHHHT
T ss_pred EEEECCCCHHHHHHHHHH-------HHcCCCcEEEeeccCCCcHHHHHHHHHhc-------CCcCHHHHhcCCChhhhhc
Confidence 344478899998776555 4457766666442 456778888876 33 3323445667788888
Q ss_pred CCc
Q 024201 189 GVL 191 (271)
Q Consensus 189 gv~ 191 (271)
++.
T Consensus 74 ~l~ 76 (121)
T 3rdw_A 74 NLD 76 (121)
T ss_dssp TTT
T ss_pred Ccc
Confidence 765
No 297
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=77.96 E-value=1.1 Score=33.77 Aligned_cols=21 Identities=10% Similarity=0.036 Sum_probs=15.3
Q ss_pred EEEEecCCCCCChHHHHHHHHH
Q 024201 112 ILFFYPLDFTFVCPTEITAFSD 133 (271)
Q Consensus 112 vL~F~~~t~Cp~C~~~l~~L~~ 133 (271)
|+.|. .+|||+|.....-|.+
T Consensus 16 Vvvys-k~~Cp~C~~ak~lL~~ 36 (127)
T 3l4n_A 16 IIIFS-KSTCSYSKGMKELLEN 36 (127)
T ss_dssp EEEEE-CTTCHHHHHHHHHHHH
T ss_pred EEEEE-cCCCccHHHHHHHHHH
Confidence 44555 6999999887766655
No 298
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=77.77 E-value=2.8 Score=30.51 Aligned_cols=27 Identities=7% Similarity=-0.090 Sum_probs=18.3
Q ss_pred CCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCC
Q 024201 119 DFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDS 152 (271)
Q Consensus 119 t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~ 152 (271)
+|||+|.....-|.+ .|+.+..+.++.
T Consensus 29 ~~Cp~C~~ak~~L~~-------~gi~y~~~di~~ 55 (111)
T 3zyw_A 29 PRCGFSKQMVEILHK-------HNIQFSSFDIFS 55 (111)
T ss_dssp BSSHHHHHHHHHHHH-------TTCCCEEEEGGG
T ss_pred CcchhHHHHHHHHHH-------cCCCeEEEECcC
Confidence 799999877665543 466666665543
No 299
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=77.41 E-value=2.7 Score=30.41 Aligned_cols=25 Identities=16% Similarity=0.105 Sum_probs=17.0
Q ss_pred CCCChHHHHHHHHHHHHHHHhcCcEEEEEeCC
Q 024201 120 FTFVCPTEITAFSDRYTEFEKLNTEILGVSTD 151 (271)
Q Consensus 120 ~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d 151 (271)
|||+|.....-|.+ .|+.+..|.++
T Consensus 32 ~Cp~C~~ak~~L~~-------~gi~~~~~dI~ 56 (109)
T 3ipz_A 32 MCGFSNTVVQILKN-------LNVPFEDVNIL 56 (109)
T ss_dssp SSHHHHHHHHHHHH-------TTCCCEEEEGG
T ss_pred CChhHHHHHHHHHH-------cCCCcEEEECC
Confidence 89999877655544 36666666654
No 300
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=76.20 E-value=5 Score=29.98 Aligned_cols=44 Identities=7% Similarity=-0.051 Sum_probs=25.5
Q ss_pred CCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHH
Q 024201 118 LDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQT 162 (271)
Q Consensus 118 ~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~ 162 (271)
.+.||.|...- .=.+...-|+.+||.+--|.++.....++++.+
T Consensus 7 t~~c~~c~~kk-~c~~aK~lL~~kgV~feEidI~~d~~~r~eM~~ 50 (121)
T 1u6t_A 7 ASSSGSTAIKK-KQQDVLGFLEANKIGFEEKDIAANEENRKWMRE 50 (121)
T ss_dssp CTTCSCHHHHH-HHHHHHHHHHHTTCCEEEEECTTCHHHHHHHHH
T ss_pred cCCCCCccchH-HHHHHHHHHHHCCCceEEEECCCCHHHHHHHHH
Confidence 68899995211 111222335667898888888754444444443
No 301
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=76.06 E-value=3.4 Score=32.45 Aligned_cols=41 Identities=12% Similarity=0.003 Sum_probs=28.4
Q ss_pred CCcEEEEEEecCCCCCChHHHHHHHH-HHHHHHHhc-CcEEEEEe
Q 024201 107 GKKYVILFFYPLDFTFVCPTEITAFS-DRYTEFEKL-NTEILGVS 149 (271)
Q Consensus 107 gkk~vvL~F~~~t~Cp~C~~~l~~L~-~~~~~~~~~-gv~vv~VS 149 (271)
++ ++|++|+ --.||+|....+.+. ++.++|.+. +|.++...
T Consensus 11 a~-~~i~~f~-D~~Cp~C~~~~~~l~~~l~~~~~~~~~v~~~~~~ 53 (186)
T 3bci_A 11 GK-PLVVVYG-DYKCPYCKELDEKVMPKLRKNYIDNHKVEYQFVN 53 (186)
T ss_dssp CC-CEEEEEE-CTTCHHHHHHHHHHHHHHHHHTTTTTSSEEEEEE
T ss_pred CC-eEEEEEE-CCCChhHHHHHHHHHHHHHHHhccCCeEEEEEEe
Confidence 44 5677777 566999999988884 566677543 47766643
No 302
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=75.02 E-value=2.3 Score=33.87 Aligned_cols=41 Identities=10% Similarity=-0.033 Sum_probs=29.1
Q ss_pred CCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEe
Q 024201 107 GKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVS 149 (271)
Q Consensus 107 gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS 149 (271)
++ ++|+.|. --.||+|....+.+.++.+++....|.++.-.
T Consensus 14 a~-vtiv~f~-D~~Cp~C~~~~~~~~~~l~~~~~g~v~~v~r~ 54 (182)
T 3gn3_A 14 GP-RLFEVFL-EPTCPFSVKAFFKLDDLLAQAGEDNVTVRIRL 54 (182)
T ss_dssp CS-EEEEEEE-CTTCHHHHHHHTTHHHHHHHHCTTTEEEEEEE
T ss_pred CC-EEEEEEE-CCCCHhHHHHHHHHHHHHHHhCCCCEEEEEEE
Confidence 44 6677776 45599999998888887777623357777643
No 303
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=74.36 E-value=5.3 Score=29.45 Aligned_cols=26 Identities=0% Similarity=-0.207 Sum_probs=17.0
Q ss_pred CCCChHHHHHHHHHHHHHHHhcCcE-EEEEeCCC
Q 024201 120 FTFVCPTEITAFSDRYTEFEKLNTE-ILGVSTDS 152 (271)
Q Consensus 120 ~Cp~C~~~l~~L~~~~~~~~~~gv~-vv~VS~d~ 152 (271)
|||+|.....-|.+ .|+. +..|.++.
T Consensus 34 ~Cp~C~~ak~lL~~-------~gv~~~~~vdV~~ 60 (118)
T 2wem_A 34 QCGFSNAVVQILRL-------HGVRDYAAYNVLD 60 (118)
T ss_dssp SSHHHHHHHHHHHH-------TTCCCCEEEESSS
T ss_pred ccHHHHHHHHHHHH-------cCCCCCEEEEcCC
Confidence 89999876555543 3663 66666654
No 304
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=74.29 E-value=6.7 Score=36.73 Aligned_cols=39 Identities=8% Similarity=0.309 Sum_probs=34.3
Q ss_pred CcccceEEcCChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEE
Q 024201 171 DLKYPLIADITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHST 215 (271)
Q Consensus 171 ~~~f~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~ 215 (271)
++.++++.|.+.++.+.|||. ..|+.+|++++|++....
T Consensus 184 ~v~v~~v~~~~~~l~~kfgV~------~~Pslvl~~~nGk~~~~~ 222 (519)
T 3t58_A 184 AVAVRRVLNTESDLVNKFGVT------DFPSCYLLLRNGSVSRVP 222 (519)
T ss_dssp TEEEEEEETTCHHHHHHHTCC------CSSEEEEEETTSCEEECC
T ss_pred CeeEEEecCchHHHHHHcCCC------CCCeEEEEeCCCceeecc
Confidence 456778888889999999999 889999999999988774
No 305
>3fhk_A UPF0403 protein YPHP; disulfide isomerase, thioredoxin superfamily, CXC motif, structural genomics, surface entropy reduction, Ser, PSI-2; 2.30A {Bacillus subtilis}
Probab=74.07 E-value=27 Score=26.65 Aligned_cols=37 Identities=16% Similarity=0.245 Sum_probs=28.8
Q ss_pred cceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHH
Q 024201 198 ALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 198 ~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l 235 (271)
..|.+.|+ |||++++..-...--++..++|.+.|+..
T Consensus 106 SSPS~ALf-KdGelVh~ieRh~IEGr~a~~Ia~~L~~a 142 (147)
T 3fhk_A 106 SSPSMALL-KGKEVVHFIPRHEIEGHDMEEIMKNLTAA 142 (147)
T ss_dssp CSSEEEEE-ETTEEEEEECGGGTTTSCHHHHHHHHHHH
T ss_pred CCchheee-eCCEEEEEeehhhcCCCCHHHHHHHHHHH
Confidence 67999999 89999998655555567888888887653
No 306
>1s3c_A Arsenate reductase; ARSC, arsenite, oxidoreductase; 1.25A {Escherichia coli} PDB: 1sd9_A 1i9d_A 1j9b_A 1sd8_A 1jzw_A* 1sk1_A* 1sjz_A* 1sk0_A* 1sk2_A 1s3d_A
Probab=73.60 E-value=4 Score=31.19 Aligned_cols=63 Identities=8% Similarity=-0.055 Sum_probs=40.1
Q ss_pred EecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCC----CHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHHHhCC
Q 024201 115 FYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTD----SVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGV 190 (271)
Q Consensus 115 F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d----~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ygv 190 (271)
+|...+|+.|+....-|. ++|+.+-.+.+. +.+++.+|.+.. +.+..-+....+..++.+++
T Consensus 6 iY~~p~C~~crkak~~L~-------~~gi~~~~idi~~~~~~~~eL~~~~~~~-------g~p~~~l~n~~~~~yk~l~l 71 (141)
T 1s3c_A 6 IYHNPASGTSRNTLEMIR-------NSGTEPTIILYLENPPSRDELVKLIADM-------GISVRALLRKNVEPYEQLGL 71 (141)
T ss_dssp EECCTTCHHHHHHHHHHH-------HTTCCCEEECTTTSCCCHHHHHHHHHHH-------TSCHHHHBCSSSHHHHHTTT
T ss_pred EEECCCChHHHHHHHHHH-------HcCCCEEEEECCCCCccHHHHHHHhccc-------CCCHHHhccCCchhHHhcCC
Confidence 444788999987665543 457777666553 345667787766 44433344556777777775
Q ss_pred c
Q 024201 191 L 191 (271)
Q Consensus 191 ~ 191 (271)
.
T Consensus 72 ~ 72 (141)
T 1s3c_A 72 A 72 (141)
T ss_dssp T
T ss_pred c
Confidence 5
No 307
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=70.63 E-value=2.8 Score=30.63 Aligned_cols=41 Identities=7% Similarity=-0.057 Sum_probs=27.2
Q ss_pred ecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCC----CHHHHHHHHHHh
Q 024201 116 YPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTD----SVFSHLAWVQTD 163 (271)
Q Consensus 116 ~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d----~~~~~~~~~~~~ 163 (271)
|...+|+.|+....-|.+ +|+.+-.+.++ +.+..++|.+..
T Consensus 5 Y~~~~C~~C~kak~~L~~-------~gi~~~~~di~~~~~~~~~l~~~~~~~ 49 (114)
T 1rw1_A 5 YGIKACDTMKKARTWLDE-------HKVAYDFHDYKAVGIDREHLRRWCAEH 49 (114)
T ss_dssp EECSSCHHHHHHHHHHHH-------TTCCEEEEEHHHHCCCHHHHHHHHHHH
T ss_pred EECCCChHHHHHHHHHHH-------CCCceEEEeecCCCCCHHHHHHHHHhC
Confidence 337899999876655543 57777666553 236667787765
No 308
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=69.41 E-value=5.6 Score=32.04 Aligned_cols=43 Identities=9% Similarity=-0.064 Sum_probs=28.8
Q ss_pred cCCcEEEEEEecCCCCCChHHHHHHH-HHHHHHHHh-cCcEEEEEeC
Q 024201 106 IGKKYVILFFYPLDFTFVCPTEITAF-SDRYTEFEK-LNTEILGVST 150 (271)
Q Consensus 106 ~gkk~vvL~F~~~t~Cp~C~~~l~~L-~~~~~~~~~-~gv~vv~VS~ 150 (271)
.++ ++|+.|+ --.||+|....+.+ ..+.++|.+ ..|.++...+
T Consensus 28 ~a~-vtvvef~-D~~CP~C~~~~~~~~~~l~~~~~~~g~v~~~~~~~ 72 (202)
T 3gha_A 28 DAP-VTVVEFG-DYKCPSCKVFNSDIFPKIQKDFIDKGDVKFSFVNV 72 (202)
T ss_dssp TCS-EEEEEEE-CTTCHHHHHHHHHTHHHHHHHTTTTTSEEEEEEEC
T ss_pred CCC-EEEEEEE-CCCChhHHHHHHHhhHHHHHHhccCCeEEEEEEec
Confidence 455 7777777 45599999887776 445556653 3577776544
No 309
>3f0i_A Arsenate reductase; structural genomics, IDP01300, vibrio CH center for structural genomics of infectious diseases, CSGI oxidoreductase; HET: MSE; 1.88A {Vibrio cholerae}
Probab=68.74 E-value=8.1 Score=28.48 Aligned_cols=65 Identities=9% Similarity=-0.062 Sum_probs=42.1
Q ss_pred EEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeC----CCHHHHHHHHHHhhhcCCCCCcc-cceEEcCChHHHHHh
Q 024201 114 FFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVST----DSVFSHLAWVQTDRKSGGLGDLK-YPLIADITKSISKSY 188 (271)
Q Consensus 114 ~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~----d~~~~~~~~~~~~~~~~~~~~~~-f~~l~D~~~~~~~~y 188 (271)
.+|...+|+.|+....-|. ++|+.+-.+.. -+.+++..|.+.. +.+ ..-+....+..++.+
T Consensus 7 ~iY~~p~C~~c~ka~~~L~-------~~gi~~~~~di~~~~~t~~eL~~~l~~~-------g~~~~~~l~n~~~~~~k~l 72 (119)
T 3f0i_A 7 VIYHNPKCSKSRETLALLE-------NQGIAPQVIKYLETSPSVEELKRLYQQL-------GLNEVRAMMRCKEELYKEL 72 (119)
T ss_dssp EEECCTTCHHHHHHHHHHH-------HTTCCCEEECHHHHCCCHHHHHHHHHHH-------TCSSGGGGBCTTSHHHHHT
T ss_pred EEEECCCChHHHHHHHHHH-------HcCCceEEEEeccCcCcHHHHHHHHHHc-------CCccHHHHhcCCCchhhhc
Confidence 3444788999988766654 34666555533 3567778898877 433 333445667788887
Q ss_pred CCcc
Q 024201 189 GVLI 192 (271)
Q Consensus 189 gv~~ 192 (271)
+...
T Consensus 73 ~l~~ 76 (119)
T 3f0i_A 73 NLGD 76 (119)
T ss_dssp TTTC
T ss_pred Cccc
Confidence 7653
No 310
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=68.45 E-value=3.4 Score=30.52 Aligned_cols=59 Identities=5% Similarity=-0.062 Sum_probs=35.6
Q ss_pred ecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCC----CHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHHHhCC
Q 024201 116 YPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTD----SVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGV 190 (271)
Q Consensus 116 ~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d----~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ygv 190 (271)
|...+|+.|+.....|.+ +|+.+-.+.++ +.+..++|.+.. + +.-+....+...+.+|.
T Consensus 10 Y~~~~C~~C~ka~~~L~~-------~gi~y~~~di~~~~~~~~~l~~~~~~~-------g--~~~l~n~~~~~~k~l~~ 72 (120)
T 2kok_A 10 YGIKNCDTMKKARIWLED-------HGIDYTFHDYKKEGLDAETLDRFLKTV-------P--WEQLLNRAGTTFRKLPE 72 (120)
T ss_dssp EECSSCHHHHHHHHHHHH-------HTCCEEEEEHHHHCCCHHHHHHHHHHS-------C--GGGTBCSSSHHHHHSCH
T ss_pred EECCCChHHHHHHHHHHH-------cCCcEEEEeeeCCCCCHHHHHHHHHHc-------C--hHhhccCCchhhHhcCc
Confidence 336899999877666554 47766666543 235667777754 2 22333455666666653
No 311
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=66.99 E-value=12 Score=30.33 Aligned_cols=48 Identities=10% Similarity=-0.086 Sum_probs=31.6
Q ss_pred ecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHH-HHH-hcCcEEEEEeC
Q 024201 101 KLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYT-EFE-KLNTEILGVST 150 (271)
Q Consensus 101 ~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~-~~~-~~gv~vv~VS~ 150 (271)
.+-+-.++ ++|+.|+ --.||+|....+.+....+ +|. ...|.++....
T Consensus 9 ~~G~~~a~-vtivef~-D~~Cp~C~~~~~~~~~~l~~~~i~~g~v~~v~r~~ 58 (205)
T 3gmf_A 9 LLGNPAAK-LRLVEFV-SYTCPHCSHFEIESEGQLKIGMVQPGKGAIEVRNF 58 (205)
T ss_dssp EESCTTCS-EEEEEEE-CTTCHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEC
T ss_pred eecCCCCC-eEEEEEE-CCCCHHHHHHHHHHHHHHHHHhccCCeEEEEEEeC
Confidence 34444565 7788888 4559999998887766555 663 33477776443
No 312
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=63.67 E-value=41 Score=29.03 Aligned_cols=93 Identities=8% Similarity=-0.065 Sum_probs=54.1
Q ss_pred EEEEEEecCCCCCChHHHHHHHHHHHHHHHh-cCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHH---
Q 024201 110 YVILFFYPLDFTFVCPTEITAFSDRYTEFEK-LNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSIS--- 185 (271)
Q Consensus 110 ~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~-~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~--- 185 (271)
..+|.|. ..+|+.|...++.|.++.++++. ..+.++-|..+. ...+.
T Consensus 247 ~~~l~f~-~~~~~~~~~~~~~~~~vA~~~~~~~~~~f~~id~~~----------------------------~~~~~~~~ 297 (350)
T 1sji_A 247 IHIVAFA-ERSDPDGYEFLEILKQVARDNTDNPDLSIVWIDPDD----------------------------FPLLVAYW 297 (350)
T ss_dssp EEEEEEC-CTTSHHHHHHHHHHHHHHHHGGGCSSCCEEEECGGG----------------------------CHHHHHHH
T ss_pred cEEEEEE-cCCCccHHHHHHHHHHHHHHhCCCCceEEEEECchh----------------------------hHHHHHHH
Confidence 3455566 67888888889999999988873 345555544321 01233
Q ss_pred -HHhCCccCCCCccceEEEEEcCCCcEEEEE-eccCCCCCCHHHHHHHHHHHH
Q 024201 186 -KSYGVLIPDQGIALRGLFIIDKEGVIQHST-INNLAIGRSVDETLRTLQALQ 236 (271)
Q Consensus 186 -~~ygv~~~~~g~~~P~~~lID~~G~V~~~~-~~~~~~~~~~~e~l~~l~~l~ 236 (271)
+.||+. . ..|..+|++....-.+.. +.+....-..+.+.+.++.+.
T Consensus 298 ~~~~gi~-~----~~P~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~F~~d~~ 345 (350)
T 1sji_A 298 EKTFKID-L----FKPQIGVVNVTDADSVWMEIPDDDDLPTAEELEDWIEDVL 345 (350)
T ss_dssp HHHCCSC-T----TSCEEEEEESSSSCEEESCSSCCSCCCCHHHHHHHHHHHH
T ss_pred HhhcCCC-c----cCCcEEEEecccccccccCCCcccccCCHHHHHHHHHHHh
Confidence 567775 1 358999998732222321 111112335677777776553
No 313
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=61.54 E-value=11 Score=30.81 Aligned_cols=33 Identities=12% Similarity=0.049 Sum_probs=20.6
Q ss_pred EEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCC
Q 024201 111 VILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTD 151 (271)
Q Consensus 111 vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d 151 (271)
.|+.|. ..|||.|......|.+ +|+.+.-|.++
T Consensus 171 ~i~ly~-~~~Cp~C~~a~~~L~~-------~~i~~~~~~i~ 203 (241)
T 1nm3_A 171 SISIFT-KPGCPFCAKAKQLLHD-------KGLSFEEIILG 203 (241)
T ss_dssp CEEEEE-CSSCHHHHHHHHHHHH-------HTCCCEEEETT
T ss_pred eEEEEE-CCCChHHHHHHHHHHH-------cCCceEEEECC
Confidence 344555 6899999976555543 35665555554
No 314
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=58.14 E-value=17 Score=26.79 Aligned_cols=45 Identities=4% Similarity=-0.099 Sum_probs=23.3
Q ss_pred EEEEEEecC----CCCCChHHHHHHHHHHHHHHHhcCc-EEEEEeCCCHHHHHHHHHH
Q 024201 110 YVILFFYPL----DFTFVCPTEITAFSDRYTEFEKLNT-EILGVSTDSVFSHLAWVQT 162 (271)
Q Consensus 110 ~vvL~F~~~----t~Cp~C~~~l~~L~~~~~~~~~~gv-~vv~VS~d~~~~~~~~~~~ 162 (271)
+||||-= + ..||+|.....-| ...|+ .+..|.++...+.++.+.+
T Consensus 21 ~VvvF~K-gt~~~P~C~fc~~ak~lL-------~~~gv~~~~~~~v~~~~~~r~~l~~ 70 (118)
T 2wul_A 21 KVVVFLK-GTPEQPQCGFSNAVVQIL-------RLHGVRDYAAYNVLDDPELRQGIKD 70 (118)
T ss_dssp SEEEEES-BCSSSBSSHHHHHHHHHH-------HHTTCCSCEEEETTSCHHHHHHHHH
T ss_pred CEEEEEc-CCCCCCCCHHHHHHHHHH-------HHhCCcCeEeecccCCHHHHHHHHH
Confidence 4655543 3 3577776554433 33465 3556666554444444443
No 315
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=54.78 E-value=34 Score=25.80 Aligned_cols=63 Identities=10% Similarity=0.120 Sum_probs=32.9
Q ss_pred HHHHHhCCccCCCCccceEEEEEcCCC-cEEEEEeccCCCCCCHHHHHHHHHHHHHhhhC---CCcccCCCCCC
Q 024201 183 SISKSYGVLIPDQGIALRGLFIIDKEG-VIQHSTINNLAIGRSVDETLRTLQALQYVQEN---PDEVCPAGWKP 252 (271)
Q Consensus 183 ~~~~~ygv~~~~~g~~~P~~~lID~~G-~V~~~~~~~~~~~~~~~e~l~~l~~l~~~~~~---~~~~~p~~~~~ 252 (271)
.+...||+... ..|.+.|++.++ ...+.. + ...-..+.+.+.++.+..-.=+ .++-.|.+|+.
T Consensus 79 ~~l~~fGl~~~----~~P~v~i~~~~~~~~Ky~~--~-~~~~t~~~i~~Fv~d~l~GkL~p~~KSEpiPe~wn~ 145 (147)
T 3bj5_A 79 RILEFFGLKKE----ECPAVRLITLEEEMTKYKP--E-SEELTAERITEFCHRFLEGKIKPHLMSQELPEDWDK 145 (147)
T ss_dssp HHHHHTTCCGG----GCSEEEEEECSSSCEEECC--S-CCCCCHHHHHHHHHHHHTTCSCEEECCSCCCGGGC-
T ss_pred HHHHHcCCCcc----cCCEEEEEecccccccCCC--C-cccCCHHHHHHHHHHHHcCCccccccCCCCCCCcCC
Confidence 45667777622 368888887522 223331 1 1122456676777665422111 15567888864
No 316
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=52.74 E-value=76 Score=27.65 Aligned_cols=97 Identities=8% Similarity=-0.012 Sum_probs=58.0
Q ss_pred EEEEEEecCCCCCChHHHHHHHHHHHHHHHhc-CcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHHHh
Q 024201 110 YVILFFYPLDFTFVCPTEITAFSDRYTEFEKL-NTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSY 188 (271)
Q Consensus 110 ~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~-gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~y 188 (271)
..+|.|+ ..+|+.|...+..|.++.++++++ .+.++-|..+..... -....+.|
T Consensus 249 ~~~~~f~-~~~~~~~~~~~~~l~~vA~~~~~~~ki~F~~id~~~~~~~------------------------l~~~~~~f 303 (367)
T 3us3_A 249 IHIVAFA-EEADPDGYEFLEILKSVAQDNTDNPDLSIIWIDPDDFPLL------------------------VPYWEKTF 303 (367)
T ss_dssp EEEEEEC-CTTSHHHHHHHHHHHHHHHHTTTCTTCCEEEECGGGCTTT------------------------HHHHHHHH
T ss_pred cEEEEEE-cCCChhHHHHHHHHHHHHHHcCCCCceEEEEECCccchhH------------------------HHHHHHhc
Confidence 4666677 456777888888999999999875 366666654320000 01124567
Q ss_pred CCccCCCCccceEEEEEcCCCc-EEEEEeccCCCCCCHHHHHHHHHHHH
Q 024201 189 GVLIPDQGIALRGLFIIDKEGV-IQHSTINNLAIGRSVDETLRTLQALQ 236 (271)
Q Consensus 189 gv~~~~~g~~~P~~~lID~~G~-V~~~~~~~~~~~~~~~e~l~~l~~l~ 236 (271)
|+.. ..|..+|++.... .++..+......-..+.+.+.++.+.
T Consensus 304 gl~~-----~~P~~~i~~~~~~~~~~y~~~~~~~~~t~~~i~~F~~~~~ 347 (367)
T 3us3_A 304 DIDL-----SAPQIGVVNVTDADSVWMEMDDEEDLPSAEELEDWLEDVL 347 (367)
T ss_dssp TCCT-----TSCEEEEEETTTCCEEECCCCTTSCCCCHHHHHHHHHHHH
T ss_pred CCCC-----CCCeEEEEecccccceeecCCcccccCCHHHHHHHHHHHH
Confidence 7751 4689999986543 22211111112346788888887664
No 317
>1xhj_A Nitrogen fixation protein NIFU; alpha-beta, NIFU-like, structural genomics, protein structur initiative, NESG, PSI; NMR {Staphylococcus epidermidis} SCOP: d.52.8.1
Probab=51.76 E-value=23 Score=24.80 Aligned_cols=34 Identities=18% Similarity=0.119 Sum_probs=24.2
Q ss_pred CceeEecccccCCcEEEEEEecCCCCCChHHHHHHHH
Q 024201 96 EFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFS 132 (271)
Q Consensus 96 ~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~ 132 (271)
+|..+.|-++.+. .+.|-+- |+ |..|+...-.|.
T Consensus 26 dGGdvelv~v~~g-~V~V~L~-Ga-C~gCpss~~TLk 59 (88)
T 1xhj_A 26 DGGDCTLVDVEDG-IVKLQLH-GA-CGTCPSSTITLK 59 (88)
T ss_dssp HSCEEEEEECCSS-EEEEEEE-SS-CCSSCHHHHHHH
T ss_pred cCCeEEEEEEECC-EEEEEEe-ec-CCCCcchHHHHH
Confidence 4557888888776 6777777 77 888876555444
No 318
>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A
Probab=49.76 E-value=1.5 Score=24.00 Aligned_cols=20 Identities=5% Similarity=0.026 Sum_probs=16.5
Q ss_pred CCChHHHHHHHHHHHHHHHh
Q 024201 121 TFVCPTEITAFSDRYTEFEK 140 (271)
Q Consensus 121 Cp~C~~~l~~L~~~~~~~~~ 140 (271)
||.|..++|++..+..-|.+
T Consensus 6 CpvCk~q~Pd~kt~~~H~e~ 25 (28)
T 2jvx_A 6 CPKCQYQAPDMDTLQIHVME 25 (28)
T ss_dssp CTTSSCEESSHHHHHHHHHH
T ss_pred CccccccCcChHHHHHHHHH
Confidence 99999999998887766653
No 319
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=47.68 E-value=44 Score=24.55 Aligned_cols=51 Identities=14% Similarity=0.025 Sum_probs=35.0
Q ss_pred ccCCcEEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHh
Q 024201 105 YIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTD 163 (271)
Q Consensus 105 ~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~ 163 (271)
|+|. ++||++-.-. . -.++..+.+.+...|+.+|+|.-......++++...
T Consensus 45 F~~a-PVVlDl~~l~-~------~~dl~~L~~~l~~~gl~~vGV~g~~~~~~~~~a~~~ 95 (120)
T 3ghf_A 45 LKHA-PVVINVSGLE-S------PVNWPELHKIVTSTGLRIIGVSGCKDASLKVEIDRM 95 (120)
T ss_dssp HTTC-EEEEEEEECC-S------SCCHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHH
T ss_pred hCCC-cEEEEccccC-C------hHHHHHHHHHHHHcCCEEEEEeCCCcHHHHHHHHHC
Confidence 5666 8888886322 1 134667777788889999999876555566666655
No 320
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=39.95 E-value=54 Score=25.77 Aligned_cols=36 Identities=6% Similarity=-0.123 Sum_probs=22.5
Q ss_pred EEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEE
Q 024201 111 VILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGV 148 (271)
Q Consensus 111 vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~V 148 (271)
.|.+|+ ---||.|-...+.+.++.+ +.+.+++|.-+
T Consensus 9 ~I~~f~-D~~CP~C~~~~~~~~~l~~-~~~~~v~v~~~ 44 (216)
T 2in3_A 9 VLWYIA-DPMCSWCWGFAPVIENIRQ-EYSAFLTVKIM 44 (216)
T ss_dssp EEEEEE-CTTCHHHHHHHHHHHHHHH-HHTTTCEEEEE
T ss_pred eEEEEE-CCCCchhhcchHHHHHHHh-cCCCCeEEEEe
Confidence 455555 5669999866666766665 43335665544
No 321
>2g2q_A Glutaredoxin-2; thioredoxin-fold, oxidoreductase, poxvirus; 2.50A {Vaccinia virus}
Probab=39.91 E-value=3.1 Score=30.89 Aligned_cols=104 Identities=14% Similarity=0.141 Sum_probs=52.9
Q ss_pred EEEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHHHhC
Q 024201 110 YVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYG 189 (271)
Q Consensus 110 ~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~yg 189 (271)
.++|.|. -..|+.|......|.++.++ .+++-|+.=+.+....-.+.. |..+ .+.+ -..+.+.+|
T Consensus 3 ~tLILfG-KP~C~vCe~~s~~l~~lede-----Y~ilrVNIlSfFsK~g~v~~l----g~~~-~y~l----Inn~~~~l~ 67 (124)
T 2g2q_A 3 NVLIIFG-KPYCSICENVSDAVEELKSE-----YDILHVDILSFFLKDGDSSML----GDVK-RGTL----IGNFAAHLS 67 (124)
T ss_dssp EEEEEEE-CTTCHHHHHHHHHHHTTTTT-----EEEEEEECCCCCCCTTGGGC----------CCTH----HHHHHHHGG
T ss_pred ceEEEeC-CCccHHHHHHHHHHHHhhcc-----ccEEEEEeeeeeccCCceeee----eccc-hhhh----HHHHHHhhc
Confidence 5788888 78899998877777555444 455555443322111111111 0000 1111 145666666
Q ss_pred CccCCCCccceEEEEEcC-CCcEEEEEeccC----CCC---CCHHHHHHHHHHH
Q 024201 190 VLIPDQGIALRGLFIIDK-EGVIQHSTINNL----AIG---RSVDETLRTLQAL 235 (271)
Q Consensus 190 v~~~~~g~~~P~~~lID~-~G~V~~~~~~~~----~~~---~~~~e~l~~l~~l 235 (271)
-. .-..|=.|+ .|.+.++.+... .++ -+.+++.+.|+..
T Consensus 68 ne-------~v~lfKydp~s~qmA~V~i~k~~~la~id~~~v~~d~L~~~Ie~a 114 (124)
T 2g2q_A 68 NY-------IVSIFKYNPQTKQMAFVDINKSLDFTKTDKSLVNLEILKSEIEKA 114 (124)
T ss_dssp GG-------CEEEEEEETTTTEEEECCCGGGBCTTCCSGGGBCHHHHHHHHHHC
T ss_pred cc-------EEEEEEEcCCCCcEEEEehhHeeeeeecchhhccHHHHHHHHHhC
Confidence 33 334566674 577777654321 122 2467777776643
No 322
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=39.52 E-value=41 Score=24.66 Aligned_cols=27 Identities=11% Similarity=0.346 Sum_probs=18.4
Q ss_pred CcEEEEEEecCCCCCChHHHHHHHHHHHHHH
Q 024201 108 KKYVILFFYPLDFTFVCPTEITAFSDRYTEF 138 (271)
Q Consensus 108 kk~vvL~F~~~t~Cp~C~~~l~~L~~~~~~~ 138 (271)
+.++||-|| .+||..| .+.+.++.+.+
T Consensus 39 ~~v~VVGfF-~~~~~~~---~~~F~~~A~~~ 65 (124)
T 2l4c_A 39 TEVAVIGFF-QDLEIPA---VPILHSMVQKF 65 (124)
T ss_dssp SSEEEEEEC-SCTTSTH---HHHHHHHHHHC
T ss_pred CCCEEEEEE-CCCCChh---HHHHHHHHHhC
Confidence 447788888 7899888 44555555554
No 323
>3ga8_A HTH-type transcriptional regulator MQSA (YGIT/B30; helix-turn-helix, Zn-binding protein, DNA-binding, transcrip transcription regulation; HET: PE4; 1.70A {Escherichia coli k-12} PDB: 3hi2_A
Probab=38.97 E-value=19 Score=24.19 Aligned_cols=36 Identities=19% Similarity=0.268 Sum_probs=25.7
Q ss_pred cccCCcEEEEEEecCCCCCCh------HHHHHHHHHHHHHHHh
Q 024201 104 DYIGKKYVILFFYPLDFTFVC------PTEITAFSDRYTEFEK 140 (271)
Q Consensus 104 d~~gkk~vvL~F~~~t~Cp~C------~~~l~~L~~~~~~~~~ 140 (271)
+++|+ .++|--.++.+|+.| ..+...+.++..+|+.
T Consensus 23 ~~~G~-~~~I~~Vp~~~C~~CGE~~~~~e~~~~~~~~~~~f~~ 64 (78)
T 3ga8_A 23 TFRGR-KTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRA 64 (78)
T ss_dssp EETTE-EEEEEEEEEEEETTTCCEECCHHHHHHHHHHHHHHHH
T ss_pred EECCE-EEEEcCceeEECCCCCCEEECHHHHHHHHHHHHHHHH
Confidence 56787 566666668889988 3567777777777764
No 324
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=36.91 E-value=49 Score=26.06 Aligned_cols=34 Identities=12% Similarity=0.034 Sum_probs=21.7
Q ss_pred cceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHHH
Q 024201 198 ALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQ 236 (271)
Q Consensus 198 ~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l~ 236 (271)
.+|+++|+ .||+.+....+ ....+++.+.|+.+.
T Consensus 176 g~Pt~~i~-~~G~~~~~~~G----~~~~~~l~~~l~~~~ 209 (216)
T 2in3_A 176 GFPALVVE-SGTDRYLITTG----YRPIEALRQLLDTWL 209 (216)
T ss_dssp SSSEEEEE-ETTEEEEEESS----CCCHHHHHHHHHHHH
T ss_pred ccceEEEE-ECCEEEEeccC----CCCHHHHHHHHHHHH
Confidence 67988776 47886544322 235677888777653
No 325
>2v2f_A Penicillin binding protein 1A; transpeptidase activity, peptidoglycan synthesis, transferase, hydrolase; HET: MES; 1.9A {Streptococcus pneumoniae} PDB: 2zc5_A* 2zc6_A*
Probab=35.48 E-value=19 Score=18.70 Aligned_cols=15 Identities=13% Similarity=0.073 Sum_probs=12.6
Q ss_pred EEEEEcCCCcEEEEE
Q 024201 201 GLFIIDKEGVIQHST 215 (271)
Q Consensus 201 ~~~lID~~G~V~~~~ 215 (271)
...|.|+||+++...
T Consensus 6 ss~IYD~~g~~i~~l 20 (26)
T 2v2f_A 6 SSKIYDNKNQLIADL 20 (26)
T ss_pred CCEEEeCCCCEeeec
Confidence 368999999999874
No 326
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=34.04 E-value=23 Score=33.24 Aligned_cols=32 Identities=9% Similarity=0.196 Sum_probs=19.2
Q ss_pred EEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCC
Q 024201 112 ILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTD 151 (271)
Q Consensus 112 vL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d 151 (271)
|+.|. ..|||+|......|.+ .++.+--|.++
T Consensus 20 v~vy~-~~~Cp~C~~~k~~L~~-------~~i~~~~~dv~ 51 (598)
T 2x8g_A 20 VILFS-KTTCPYCKKVKDVLAE-------AKIKHATIELD 51 (598)
T ss_dssp EEEEE-CTTCHHHHHHHHHHHH-------TTCCCEEEEGG
T ss_pred EEEEE-CCCChhHHHHHHHHHH-------CCCCcEEEEcc
Confidence 44555 6899999866555443 35544445544
No 327
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=33.60 E-value=76 Score=27.70 Aligned_cols=25 Identities=4% Similarity=-0.265 Sum_probs=15.2
Q ss_pred hHHHHHhCCccCCCCccceEEEEEcCCCcE
Q 024201 182 KSISKSYGVLIPDQGIALRGLFIIDKEGVI 211 (271)
Q Consensus 182 ~~~~~~ygv~~~~~g~~~P~~~lID~~G~V 211 (271)
..+.+.||+... ..|...|++. ++.
T Consensus 281 ~~~~~~~gl~~~----~~P~i~i~~~-~~~ 305 (382)
T 2r2j_A 281 RHPLLHIQKTPA----DCPVIAIDSF-RHM 305 (382)
T ss_dssp HHHHHHTTCCGG----GCSEEEEECS-SCE
T ss_pred HHHHHHcCCCcc----CCCEEEEEcc-hhc
Confidence 456777887632 3687777654 443
No 328
>2l3i_A Aoxki4A, antimicrobial peptide in spider venom; antimicrobial protein; NMR {Araneae}
Probab=33.28 E-value=16 Score=19.35 Aligned_cols=10 Identities=40% Similarity=0.959 Sum_probs=8.0
Q ss_pred CcccCCCCCC
Q 024201 243 DEVCPAGWKP 252 (271)
Q Consensus 243 ~~~~p~~~~~ 252 (271)
++.||-.|+-
T Consensus 1 gircpkswkc 10 (30)
T 2l3i_A 1 GIRCPKSWKC 10 (30)
T ss_dssp CCCSSSCSCC
T ss_pred CCCCCcchhH
Confidence 4679999975
No 329
>3sti_A Protease DEGQ; serine protease, PDZ domain, chaperone, hydrolase; 2.60A {Escherichia coli}
Probab=32.74 E-value=34 Score=28.40 Aligned_cols=45 Identities=13% Similarity=0.029 Sum_probs=25.3
Q ss_pred EEcCCCcEEEEEeccCC---------CCCCHHHHHHHHHHHHHhhhCCCcccCCCCCCC
Q 024201 204 IIDKEGVIQHSTINNLA---------IGRSVDETLRTLQALQYVQENPDEVCPAGWKPG 253 (271)
Q Consensus 204 lID~~G~V~~~~~~~~~---------~~~~~~e~l~~l~~l~~~~~~~~~~~p~~~~~~ 253 (271)
|+|.+|+|+.+...... ..-.++.+.+.++.|....+ +|.+||..
T Consensus 191 Lvn~~G~vVGI~s~~~~~~~~~~g~~faIP~~~~~~~~~~l~~~g~-----~~~~~~~~ 244 (245)
T 3sti_A 191 LLNLNGELIGINTAILAPGGGSVGIGFAIPSNMARTLAQQLIDFGE-----ILEHHHHH 244 (245)
T ss_dssp EECTTSCEEEEEECCC------CCCEEEEEHHHHHHHHHHHHHHHH-----HC------
T ss_pred eecCCCeEEEEEEeEECCCCCcceEEEEEeHHHHHHHHHHHHHcCC-----CCCccccC
Confidence 67999999998543211 11246778888887764433 78888863
No 330
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=32.28 E-value=58 Score=25.32 Aligned_cols=41 Identities=15% Similarity=0.186 Sum_probs=27.3
Q ss_pred hHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHH
Q 024201 182 KSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 182 ~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l 235 (271)
...++.+||. .+|+++| ||+.+-...+ ..+.+++.+.|+.|
T Consensus 142 ~~~a~~~gv~------GtPtfvv---ng~~~v~~~G----a~~~e~~~~~i~~l 182 (185)
T 3feu_A 142 KMLSEKSGIS------SVPTFVV---NGKYNVLIGG----HDDPKQIADTIRYL 182 (185)
T ss_dssp HHHHHHHTCC------SSSEEEE---TTTEEECGGG----CSSHHHHHHHHHHH
T ss_pred HHHHHHcCCC------ccCEEEE---CCEEEEecCC----CCCHHHHHHHHHHH
Confidence 5567888998 8898876 6875432111 23577888887765
No 331
>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1
Probab=29.96 E-value=1.4e+02 Score=21.21 Aligned_cols=49 Identities=12% Similarity=0.140 Sum_probs=31.1
Q ss_pred cCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHHHhCCccCCCCccceEE-EEEcCCCcEEEEE
Q 024201 141 LNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGL-FIIDKEGVIQHST 215 (271)
Q Consensus 141 ~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ygv~~~~~g~~~P~~-~lID~~G~V~~~~ 215 (271)
.++.-+++.+++.+...+.++.. +.. +... +|. ... ++.|++|.++...
T Consensus 76 ~~~~h~~f~v~d~~~~~~~l~~~-------G~~--~~~~--------~g~---------~~~~~~~DPdG~~iel~ 125 (144)
T 2c21_A 76 EAYGHIAIGVEDVKELVADMRKH-------DVP--IDYE--------DES---------GFMAFVVDPDGYYIELL 125 (144)
T ss_dssp SSEEEEEEEESCHHHHHHHHHHT-------TCC--EEEE--------CSS---------SSEEEEECTTSCEEEEE
T ss_pred CCceEEEEEeCCHHHHHHHHHHC-------CCE--Eecc--------CCc---------EEEEEEECCCCCEEEEE
Confidence 36677888888766555555544 332 3322 232 234 8999999999985
No 332
>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}
Probab=29.85 E-value=1.3e+02 Score=20.51 Aligned_cols=53 Identities=9% Similarity=-0.001 Sum_probs=31.0
Q ss_pred cCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHHHhCCccCCCCccceEEEEEcCCCcEEEE
Q 024201 141 LNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHS 214 (271)
Q Consensus 141 ~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~ 214 (271)
.|+.-+++.+++.+...+.++.. +..+ ...... ... .....++.|++|.++..
T Consensus 80 ~g~~~~~~~v~d~~~~~~~l~~~-------G~~~--~~~~~~------~~~------g~~~~~~~DPdG~~iel 132 (134)
T 3l7t_A 80 CGLRHLAFYVEDVEASRQELIAL-------GIRV--EEVRYD------DYT------GKKMAFFFDPDGLPLEL 132 (134)
T ss_dssp SEEEEEEEECSCHHHHHHHHHHH-------TCCC--CCCEEC------TTS------CCEEEEEECTTCCEEEE
T ss_pred CCeEEEEEEECCHHHHHHHHHhC-------CCcc--cceecc------CCC------ceEEEEEECCCCCEEEE
Confidence 35677888888766665555554 2222 111000 001 23568999999998875
No 333
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=29.62 E-value=1.2e+02 Score=24.22 Aligned_cols=47 Identities=6% Similarity=0.029 Sum_probs=25.5
Q ss_pred CChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHH
Q 024201 180 ITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQ 233 (271)
Q Consensus 180 ~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~ 233 (271)
.+.++++.|++. . |+.+|+.+...-...+.+...-..+.+++.+.++
T Consensus 62 ~~~~v~~~~~v~------~-p~i~lfk~~~~~~~~~~~~~~g~~~~~~l~~fi~ 108 (227)
T 4f9z_D 62 TDSEVLTHYNIT------G-NTICLFRLVDNEQLNLEDEDIESIDATKLSRFIE 108 (227)
T ss_dssp CCHHHHHHTTCC------S-SEEEEEETTTTEEEEECHHHHHTCCHHHHHHHHH
T ss_pred CCHHHHHHcCCC------C-CeEEEEEecCcccccccccccCCCCHHHHHHHHH
Confidence 356788889887 4 7777776532222222111001245677777665
No 334
>2k9k_A TONB2; metal transport; NMR {Listonella anguillarum}
Probab=29.37 E-value=70 Score=22.42 Aligned_cols=46 Identities=20% Similarity=0.182 Sum_probs=27.4
Q ss_pred HHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccC-CCCCCHHHHHHHHHH
Q 024201 184 ISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNL-AIGRSVDETLRTLQA 234 (271)
Q Consensus 184 ~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~-~~~~~~~e~l~~l~~ 234 (271)
.++..|+. | ..--.|.||++|+|....+-.. +...--++.++.++.
T Consensus 32 ~A~~~~~e----G-~V~v~f~I~~~G~v~~~~v~~ssg~~~ld~aAl~av~~ 78 (106)
T 2k9k_A 32 RALKRGVE----G-FVTLSFTIDTTGKAVDINVVDANPKRMFEREAMQALKK 78 (106)
T ss_dssp HHHHHCCC----C-EEEEEEEEETTTEEEEEEEEEESSSSSSHHHHHHHHHH
T ss_pred HHHHcCCe----e-EEEEEEEECCCCcEEEEEEEEcCCcHHHHHHHHHHHHh
Confidence 45555554 3 2456799999999998876432 222233445555554
No 335
>3j21_Z 50S ribosomal protein L30E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=28.43 E-value=1.5e+02 Score=20.55 Aligned_cols=57 Identities=7% Similarity=-0.041 Sum_probs=35.5
Q ss_pred HHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHHHhCCc
Q 024201 132 SDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVL 191 (271)
Q Consensus 132 ~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ygv~ 191 (271)
.+..+.++...+.+|.|..|.+.+.......+-+.. +.++..+.....++.++.|..
T Consensus 21 ~~v~kai~~gka~lViiA~D~~~~~~~~i~~~c~~~---~ip~~~~~~s~~eLG~a~Gk~ 77 (99)
T 3j21_Z 21 NETIRLAKTGGAKLIIVAKNAPKEIKDDIYYYAKLS---DIPVYEFEGTSVELGTLLGKP 77 (99)
T ss_dssp HHHHHHHHHTCCSEEEEECCCCHHHHHHHHHHHHHT---TCCEEEECCCSCGGGGTTCST
T ss_pred HHHHHHHHcCCccEEEEeCCCCHHHHHHHHHHHHHc---CCCEEEeCCCHHHHHHHHCCC
Confidence 445555666668888888887766655554432221 444434435677888888876
No 336
>1w63_Q Adapter-related protein complex 1 sigma 1A subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1
Probab=27.95 E-value=80 Score=24.16 Aligned_cols=19 Identities=11% Similarity=0.254 Sum_probs=15.0
Q ss_pred eEEEEEcCCCcEEEEEecc
Q 024201 200 RGLFIIDKEGVIQHSTINN 218 (271)
Q Consensus 200 P~~~lID~~G~V~~~~~~~ 218 (271)
...+|+|++|+++-...+.
T Consensus 3 ~~i~Il~~~Gk~~lsk~y~ 21 (158)
T 1w63_Q 3 RFMLLFSRQGKLRLQKWYL 21 (158)
T ss_dssp EEEEEECSSSCEEEEEESS
T ss_pred EEEEEECCCCCEEEEEeCC
Confidence 4689999999988776553
No 337
>3v67_A Sensor protein CPXA; PAS fold, signal sensing, signaling protein, merohedral twin; 2.30A {Vibrio parahaemolyticus}
Probab=27.79 E-value=48 Score=25.10 Aligned_cols=36 Identities=19% Similarity=0.282 Sum_probs=23.9
Q ss_pred ceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHHHHhhhC
Q 024201 199 LRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQYVQEN 241 (271)
Q Consensus 199 ~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l~~~~~~ 241 (271)
-+..||+|.+|+|+... +..+--+++|+......+.
T Consensus 55 ~~r~~l~d~eG~Il~~~-------~~~~~~~ralrnFi~~sd~ 90 (138)
T 3v67_A 55 RPRVFFSDYNGNVLTTD-------KRSNFQLRAMQNFVTSIED 90 (138)
T ss_dssp SCEEEEECTTSCEECCC-------CSCHHHHHHHHHHHHHCSC
T ss_pred CccEEEEcCCCCEecCC-------cccchhHHHHHHHHHhccC
Confidence 36799999999999863 2223345666666555443
No 338
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=27.65 E-value=29 Score=26.83 Aligned_cols=39 Identities=18% Similarity=0.163 Sum_probs=25.2
Q ss_pred hHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHHH
Q 024201 182 KSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQ 236 (271)
Q Consensus 182 ~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l~ 236 (271)
...++.+|+. .+|+++| ||+.+. + ....+++.+.|+.+.
T Consensus 139 ~~~a~~~gv~------GtPt~vv---nG~~~~---G----~~~~~~l~~~i~~~~ 177 (186)
T 3bci_A 139 KKIAKDNHIK------TTPTAFI---NGEKVE---D----PYDYESYEKLLKDKI 177 (186)
T ss_dssp HHHHHHTTCC------SSSEEEE---TTEECS---C----TTCHHHHHHHHHC--
T ss_pred HHHHHHcCCC------CCCeEEE---CCEEcC---C----CCCHHHHHHHHHHHH
Confidence 4567788888 8898876 686421 1 245778888877654
No 339
>2r47_A Uncharacterized protein MTH_862; unknown function, structural genomics, APC5901, PSI-2; 1.88A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=27.57 E-value=72 Score=24.74 Aligned_cols=60 Identities=10% Similarity=0.148 Sum_probs=44.1
Q ss_pred EEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcC
Q 024201 111 VILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADI 180 (271)
Q Consensus 111 vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~ 180 (271)
+|+.+- +---|.+.-.....+++.+++-+.+-.+|+|...+.+....|.+.. +|.++-|.
T Consensus 87 ~vVllG-GLAMPk~~v~~e~v~~li~ki~~~~~kiiGvCFms~F~kagW~~~I---------dFD~iID~ 146 (157)
T 2r47_A 87 VLVLLG-GLSMPGIGSDIEDVKKLVEDALEEGGELMGLCYMDMFARAGWYELL---------DFDCVINA 146 (157)
T ss_dssp EEEEEG-GGGSTTTSCCHHHHHHHHHHHEEEEEEEEEEEETTHHHHTTHHHHS---------CCSEEEEE
T ss_pred EEEEec-cccCCCCCCCHHHHHHHHHHhhcCCCCEEEEEhHHHHHHcCCCccC---------CccEEEEc
Confidence 444444 5557877767778888888884335679999999999999999976 56566554
No 340
>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}
Probab=27.32 E-value=1.4e+02 Score=21.35 Aligned_cols=18 Identities=17% Similarity=0.492 Sum_probs=14.9
Q ss_pred EEEEEcCCCcEEEEEecc
Q 024201 201 GLFIIDKEGVIQHSTINN 218 (271)
Q Consensus 201 ~~~lID~~G~V~~~~~~~ 218 (271)
..|+.|++|.++.....+
T Consensus 135 ~~~~~DPdG~~iel~~~~ 152 (156)
T 3kol_A 135 GVYFYDPDGFMIEIRCDP 152 (156)
T ss_dssp EEEEECTTSCEEEEEECC
T ss_pred EEEEECCCCCEEEEEecC
Confidence 689999999999986543
No 341
>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}
Probab=27.24 E-value=1.5e+02 Score=20.12 Aligned_cols=53 Identities=11% Similarity=0.142 Sum_probs=30.2
Q ss_pred cCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHHHhCCccCCCCccceEEEEEcCCCcEEEE
Q 024201 141 LNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHS 214 (271)
Q Consensus 141 ~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~ 214 (271)
.|+.-+++.+++.+...+.++.. +..+ ...... ..+ .....++.|++|.++..
T Consensus 72 ~g~~~~~~~v~d~~~~~~~l~~~-------G~~~--~~~~~~---~~~---------g~~~~~~~DPdG~~iel 124 (126)
T 2p25_A 72 LGLRHLAFKVEHIEEVIAFLNEQ-------GIET--EPLRVD---DFT---------GKKMTFFFDPDGLPLEL 124 (126)
T ss_dssp SSCCCEEEECSCHHHHHHHHHHT-------TCCC--CCCEEC---TTT---------CCEEEEEECTTCCEEEE
T ss_pred ccceEEEEEeCCHHHHHHHHHHc-------CCcc--cccccc---CCC---------CcEEEEEECCCCCEEEe
Confidence 35667888888766655555544 2222 110000 011 23567899999999876
No 342
>1w41_A 50S ribosomal protein L30E; electrostatic interactions, thermostability, protein engineering; 1.7A {Thermococcus celer} SCOP: d.79.3.1 PDB: 3n4y_A 3lfo_A 1w40_A 1go0_A 1go1_A 1h7m_A 1w42_A 1w3e_X 3ra6_A 3ra5_A 3n4z_A 2bo1_A
Probab=26.94 E-value=1.6e+02 Score=20.43 Aligned_cols=57 Identities=4% Similarity=-0.081 Sum_probs=35.0
Q ss_pred HHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHHHhCCc
Q 024201 132 SDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVL 191 (271)
Q Consensus 132 ~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ygv~ 191 (271)
.+..+.++.....+|.|..|.+.+.......+-... +.++..+.+...++.+..|..
T Consensus 22 ~~v~kai~~gka~lViiA~D~~~~~~~~l~~~c~~~---~vp~~~~~~s~~eLG~a~G~~ 78 (101)
T 1w41_A 22 RKSIQYAKMGGAKLIIVARNARPDIKEDIEYYARLS---GIPVYEFEGTSVELGTLLGRP 78 (101)
T ss_dssp HHHHHHHHHTCCSEEEEETTSCHHHHHHHHHHHHHH---TCCEEEESSCHHHHHHHTTCS
T ss_pred HHHHHHHHcCCCcEEEEeCCCCHHHHHHHHHHHHhc---CCCEEEecCCHHHHHHHhCCC
Confidence 444555666668888888887666655444442221 344333335678999999876
No 343
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=26.87 E-value=98 Score=24.26 Aligned_cols=36 Identities=6% Similarity=-0.068 Sum_probs=24.5
Q ss_pred EEEEEecCCCCCChHHHHHHHHHHHHHHHhcCcEEEEE
Q 024201 111 VILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGV 148 (271)
Q Consensus 111 vvL~F~~~t~Cp~C~~~l~~L~~~~~~~~~~gv~vv~V 148 (271)
.|.+|+ -.-||.|-...+.|.++.+++.+ +|+|.-.
T Consensus 4 ~I~~~~-D~~CP~cy~~~~~l~~l~~~~~~-~v~v~~~ 39 (208)
T 3kzq_A 4 KLYYVH-DPMCSWCWGYKPTIEKLKQQLPG-VIQFEYV 39 (208)
T ss_dssp EEEEEE-CTTCHHHHHHHHHHHHHHHHSCT-TSEEEEE
T ss_pred EEEEEE-CCCCchhhhhhHHHHHHHHhCCC-CceEEEE
Confidence 344455 56689998888888888887742 5655544
No 344
>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*
Probab=26.32 E-value=90 Score=22.22 Aligned_cols=59 Identities=10% Similarity=-0.051 Sum_probs=36.9
Q ss_pred cCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEec
Q 024201 141 LNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTIN 217 (271)
Q Consensus 141 ~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~ 217 (271)
.+..-+++.+++.++..++.+...+.+ ..++..+... .+ .....++.|++|.++.....
T Consensus 70 ~~~~~l~f~v~~~~dv~~~~~~l~~~G------~~~~~~~~~~---~~---------g~~~~~~~DPdG~~iel~~~ 128 (138)
T 2a4x_A 70 GHRFAIAFEFPDTASVDKKYAELVDAG------YEGHLKPWNA---VW---------GQRYAIVKDPDGNVVDLFAP 128 (138)
T ss_dssp SCSEEEEEECSSHHHHHHHHHHHHHTT------CCEEEEEEEE---TT---------TEEEEEEECTTCCEEEEEEE
T ss_pred CCeEEEEEEeCCHHHHHHHHHHHHHCC------CceeeCCccc---CC---------CcEEEEEECCCCCEEEEEeC
Confidence 356788899997777777777665432 2233222110 11 23568999999999998643
No 345
>3cwf_A Alkaline phosphatase synthesis sensor protein PHO; PAS domain, alkaline phosphatase synthesi protein PHOR, structural genomics, PSI-2; HET: EPE; 2.20A {Bacillus subtilis subsp}
Probab=26.14 E-value=36 Score=24.35 Aligned_cols=15 Identities=20% Similarity=0.381 Sum_probs=13.3
Q ss_pred EEEEEcCCCcEEEEE
Q 024201 201 GLFIIDKEGVIQHST 215 (271)
Q Consensus 201 ~~~lID~~G~V~~~~ 215 (271)
+..|||++|+|++-.
T Consensus 50 rItiiD~~G~Vl~dS 64 (122)
T 3cwf_A 50 SASVIDTDGKVLYGS 64 (122)
T ss_dssp EEEEEETTSCEEEET
T ss_pred EEEEECCCCcEEEeC
Confidence 489999999999975
No 346
>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}
Probab=26.05 E-value=1.5e+02 Score=21.71 Aligned_cols=54 Identities=7% Similarity=0.055 Sum_probs=32.4
Q ss_pred hcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEE
Q 024201 140 KLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHST 215 (271)
Q Consensus 140 ~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~ 215 (271)
..|+..+++.+++.+...+.++.. +.. ++..+.. .. .....|+.|++|+++...
T Consensus 96 ~~g~~~l~f~VdDvda~~~~l~~~-------Gv~--~~~~p~~-------~~------~g~~~~f~DPdGn~iel~ 149 (155)
T 4g6x_A 96 ADGIPAASFAVDDIAAEYERLSAL-------GVR--FTQEPTD-------MG------PVVTAILDDTCGNLIQLM 149 (155)
T ss_dssp HTTCCSEEEEESCHHHHHHHHHHT-------TCC--EEEEEEE-------CS------SCEEEEEECSSSCEEEEE
T ss_pred cCCceEEEeeechhhhhhhHHhcC-------CcE--EeeCCEE-------cC------CeEEEEEECCCCCEEEEE
Confidence 346777888888766555555544 333 3332211 01 124578999999998874
No 347
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=25.76 E-value=1.3e+02 Score=21.01 Aligned_cols=39 Identities=10% Similarity=-0.058 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHh
Q 024201 125 PTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTD 163 (271)
Q Consensus 125 ~~~l~~L~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~ 163 (271)
....|...++.++++++|+.+..+|..+.......++..
T Consensus 17 ~~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~ 55 (137)
T 2pr7_A 17 DEDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIREL 55 (137)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHH
T ss_pred CccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHC
Confidence 445788888899999999999988887655555555554
No 348
>1veh_A NIFU-like protein hirip5; structural genomics, mouse cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: d.52.8.1
Probab=25.31 E-value=35 Score=24.01 Aligned_cols=34 Identities=18% Similarity=0.182 Sum_probs=22.9
Q ss_pred CceeEecccccCCcEEEEEEecCCCCCChHHHHHHHH
Q 024201 96 EFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFS 132 (271)
Q Consensus 96 ~g~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~ 132 (271)
+|..+.|-++.+. .+.|-+- ++ |..|....-.|.
T Consensus 33 dGGdvelv~v~~g-~V~v~l~-Ga-C~gC~ss~~Tlk 66 (92)
T 1veh_A 33 DGGDVIYRGFEDG-IVRLKLQ-GS-CTSCPSSIITLK 66 (92)
T ss_dssp HSCCCCEEEEETT-EEEECCC-CC-CCCCHHHHHHTH
T ss_pred cCCeEEEEEEeCC-EEEEEEe-ec-CCCCCCcHHHHH
Confidence 3446777777666 5666666 77 889986655555
No 349
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=25.20 E-value=21 Score=27.48 Aligned_cols=25 Identities=8% Similarity=0.021 Sum_probs=19.8
Q ss_pred EEEecCCCCCChHHHHHHHHHHHHH
Q 024201 113 LFFYPLDFTFVCPTEITAFSDRYTE 137 (271)
Q Consensus 113 L~F~~~t~Cp~C~~~l~~L~~~~~~ 137 (271)
.+-|..+|||.|..++..+.+.+++
T Consensus 40 ~~t~Cp~~Cp~~~~~l~~l~~~~~~ 64 (170)
T 4hde_A 40 MFTNCQTVCPPMTANMAKLQKMAKE 64 (170)
T ss_dssp ECTTCSSSHHHHHHHHHHHHHHHHH
T ss_pred ECCCCCCcccHHHHHHHHHHHhhhc
Confidence 3556457999999999999887754
No 350
>3bqa_A Sensor protein PHOQ; histidine kinase sensor domain, ATP-binding, inner membrane, magnesium, membrane, metal-binding, nucleotide-binding; 2.00A {Escherichia coli} PDB: 3bq8_A 1yax_A
Probab=25.14 E-value=30 Score=26.35 Aligned_cols=25 Identities=20% Similarity=0.320 Sum_probs=18.0
Q ss_pred EEEEEcCCCcEEEEEeccCCCCCCHHHHHHHH
Q 024201 201 GLFIIDKEGVIQHSTINNLAIGRSVDETLRTL 232 (271)
Q Consensus 201 ~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l 232 (271)
-.+|.|.+|++++.. +++.++.+.|
T Consensus 43 LvlIYDe~G~lLW~q-------r~vP~le~~I 67 (148)
T 3bqa_A 43 MTLIYDENGQLLWAQ-------RDVPWLMKMI 67 (148)
T ss_dssp EEEEECTTSCEEEES-------SCCHHHHHHS
T ss_pred EEEEEcCCCcEEEec-------CcchHHHhhc
Confidence 367889999999984 5555555544
No 351
>1ahl_A Anthopleurin-A, AP-A; neurotoxin, cardiac stimulant; NMR {Anthopleura xanthogrammica} SCOP: g.9.1.1 PDB: 1apf_A
Probab=24.78 E-value=27 Score=21.54 Aligned_cols=11 Identities=36% Similarity=1.093 Sum_probs=8.8
Q ss_pred cccCCCCCCCC
Q 024201 244 EVCPAGWKPGD 254 (271)
Q Consensus 244 ~~~p~~~~~~~ 254 (271)
..||.+||.=.
T Consensus 27 ~~CpsGWhkC~ 37 (49)
T 1ahl_A 27 SGCPSGWHNCK 37 (49)
T ss_dssp TSSCTTCCCCC
T ss_pred CCCcchhhhhh
Confidence 57999998754
No 352
>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*
Probab=24.72 E-value=1.4e+02 Score=21.01 Aligned_cols=58 Identities=14% Similarity=0.106 Sum_probs=33.8
Q ss_pred CcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEE
Q 024201 142 NTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHST 215 (271)
Q Consensus 142 gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~ 215 (271)
+..-+++.+++.++..++.+...+.. .....++..+... .+ . ...++.|+||..+...
T Consensus 72 ~~~~~~~~v~~~~dv~~~~~~l~~~~---~~G~~~~~~p~~~---~~---------g-~~~~~~DPdGn~iel~ 129 (132)
T 3sk2_A 72 RFSEIGIMLPTGEDVDKLFNEWTKQK---SHQIIVIKEPYTD---VF---------G-RTFLISDPDGHIIRVC 129 (132)
T ss_dssp CCEEEEEEESSHHHHHHHHHHHHHCS---SSCCEEEEEEEEE---TT---------E-EEEEEECTTCCEEEEE
T ss_pred CcceEEEEeCCHHHHHHHHHHHHhhh---cCCCEEeeCCccc---Cc---------e-EEEEEECCCCCEEEEE
Confidence 45567888887677777776664400 0122233222111 12 2 4589999999999875
No 353
>4gym_A Glyoxalase/bleomycin resistance protein/dioxygena; PSI-biology, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.56A {Conexibacter woesei}
Probab=24.66 E-value=1e+02 Score=22.25 Aligned_cols=55 Identities=22% Similarity=0.200 Sum_probs=34.0
Q ss_pred EEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEec
Q 024201 144 EILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTIN 217 (271)
Q Consensus 144 ~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~ 217 (271)
..+++.+++.++..++.+...+.+. .++..+.. . + .....|+-|+||.++.+...
T Consensus 79 ~~~a~~v~~~~~vd~~~~~~~~~g~------~~~~~p~~-----~-------~-~~~~~~f~DPDGn~iEi~~~ 133 (149)
T 4gym_A 79 AIVCVSAIDRDDVDRFADTALGAGG------TVARDPMD-----Y-------G-FMYGRSFHDLDGHLWEVMWM 133 (149)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHTTC------EECSCCEE-----C-------S-SEEEEEEECTTCCEEEEEEE
T ss_pred eEEEEEeccHHHHHHHHHHHHhcCc------eeeccccc-----c-------C-CEEEEEEEcCCCCEEEEEEE
Confidence 4678888887777777776644321 12111110 0 1 23568999999999988643
No 354
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=24.48 E-value=87 Score=24.58 Aligned_cols=34 Identities=12% Similarity=0.127 Sum_probs=21.2
Q ss_pred cceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHHH
Q 024201 198 ALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQ 236 (271)
Q Consensus 198 ~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l~ 236 (271)
.+|+++| +.+|+.+....+ ....+++++.|+.+.
T Consensus 169 g~Pt~~v-~~~~~~~~~~~g----~~~~e~~~~~i~~~~ 202 (208)
T 3kzq_A 169 SYPSLVL-QINDAYFPIEVD----YLSTEPTLKLIRERI 202 (208)
T ss_dssp SSSEEEE-EETTEEEEECCC----SSCSHHHHHHHHHHH
T ss_pred cccEEEE-EECCEEEEeeCC----CCCHHHHHHHHHHHH
Confidence 5677655 557776655322 235678888887764
No 355
>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus}
Probab=23.41 E-value=1.5e+02 Score=21.14 Aligned_cols=61 Identities=8% Similarity=0.009 Sum_probs=33.6
Q ss_pred cCcEEEEEeCCCHHHHHHHHHH-hhhcCCCCCcccceEEcCChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEe
Q 024201 141 LNTEILGVSTDSVFSHLAWVQT-DRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTI 216 (271)
Q Consensus 141 ~gv~vv~VS~d~~~~~~~~~~~-~~~~~~~~~~~f~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~ 216 (271)
.|+. +++.+++.+...+.++. . +.. ++..+.. ..||... .+.....+++.|+||.++....
T Consensus 73 ~g~~-~~~~v~dvd~~~~~l~~~~-------G~~--~~~~~~~---~~~g~~~--~~~~~~~~~~~DPdG~~iel~~ 134 (145)
T 2rk9_A 73 SGVN-FQWDVIDIEPLYQRVNESA-------ADS--IYLALES---KSYQCGD--SIATQKQFMVQTPDGYLFRFCQ 134 (145)
T ss_dssp TTEE-EEEECSCHHHHHHHHHHHH-------GGG--EEEEEEE---EEC-------CCEEEEEEEECTTCCEEEEEE
T ss_pred CceE-EEEEECCHHHHHHHHHhhC-------CCe--EecCccc---cccccCC--CCCcceEEEEECCCCCEEEEEE
Confidence 3666 88888887766655555 4 222 3322211 1133200 0113456889999999998853
No 356
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=23.21 E-value=7.2 Score=22.26 Aligned_cols=18 Identities=6% Similarity=0.294 Sum_probs=11.3
Q ss_pred CCChHHHHHHHHHHHHHH
Q 024201 121 TFVCPTEITAFSDRYTEF 138 (271)
Q Consensus 121 Cp~C~~~l~~L~~~~~~~ 138 (271)
||.|...+....++..-|
T Consensus 8 CP~C~~~l~s~~~L~~Hy 25 (34)
T 3mjh_B 8 CPQCMKSLGSADELFKHY 25 (34)
T ss_dssp CTTTCCEESSHHHHHHHH
T ss_pred CcHHHHHcCCHHHHHHHH
Confidence 999986655544444443
No 357
>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}
Probab=22.75 E-value=1.9e+02 Score=19.70 Aligned_cols=57 Identities=16% Similarity=0.137 Sum_probs=34.1
Q ss_pred cCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEE
Q 024201 141 LNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHST 215 (271)
Q Consensus 141 ~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~ 215 (271)
.|+.-+++.+++.++..++.+...+.+ . .+...+.. ..+ .....++.|++|.++...
T Consensus 70 ~g~~hi~~~v~d~~~v~~~~~~l~~~G----~--~~~~~~~~---~~~---------g~~~~~~~DPdG~~iel~ 126 (127)
T 3e5d_A 70 LGWAHIAISTGTKEAVDELTEKLRQDG----F--AIAGEPRM---TGD---------GYYESVVLDPEGNRIEIT 126 (127)
T ss_dssp SSCCCEEEECSSHHHHHHHHHHHHHTT----C--CEEEEEEE---CTT---------SCEEEEEECTTSCEEEEE
T ss_pred CceEEEEEEcCCHHHHHHHHHHHHHcC----C--eEecCccc---CCC---------CcEEEEEECCCCCEEEEe
Confidence 457788888988776666666654432 2 23222110 001 235688999999998763
No 358
>1th5_A NIFU1; iron-sulfur cluster binding, structural genomics, program for RICE genome research, unknown function; NMR {Oryza sativa} SCOP: d.52.8.1
Probab=22.53 E-value=58 Score=21.81 Aligned_cols=39 Identities=15% Similarity=-0.055 Sum_probs=24.9
Q ss_pred CCc-eeEecccccCCcEEEEEEecCCCCCChHHHHHHHHHHHH
Q 024201 95 QEF-INVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYT 136 (271)
Q Consensus 95 ~~g-~~v~Lsd~~gkk~vvL~F~~~t~Cp~C~~~l~~L~~~~~ 136 (271)
.+| ..+.|-++.+. .+.|-+- ++ |..|.+..-.+.+...
T Consensus 22 ~dGGGdvelv~v~~g-~V~v~l~-Ga-C~gc~Tlk~gIe~~L~ 61 (74)
T 1th5_A 22 GTGGGGLQFLMIKGP-IVKVRLT-GP-AAVVRTVRIAVSKKLR 61 (74)
T ss_dssp TTTCCCCCCCEEETT-EEEECCC-SS-SSSSSSHHHHHHHHHH
T ss_pred hcCCCcEEEEEEeCC-EEEEEEe-cC-CcchHHHHHHHHHHHH
Confidence 344 67888888776 5666666 77 8899544445554443
No 359
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=22.44 E-value=80 Score=24.97 Aligned_cols=38 Identities=13% Similarity=0.230 Sum_probs=26.2
Q ss_pred hHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHH
Q 024201 182 KSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQAL 235 (271)
Q Consensus 182 ~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l 235 (271)
...++.+|+. .+|+++| ||+.+. + ..+.+++.+.|+.+
T Consensus 153 ~~~a~~~gV~------gtPtfvv---nG~~~~---G----~~~~e~l~~~i~~~ 190 (202)
T 3gha_A 153 SDLNQKMNIQ------ATPTIYV---NDKVIK---N----FADYDEIKETIEKE 190 (202)
T ss_dssp HHHHHHTTCC------SSCEEEE---TTEECS---C----TTCHHHHHHHHHHH
T ss_pred HHHHHHcCCC------cCCEEEE---CCEEec---C----CCCHHHHHHHHHHH
Confidence 4567788888 8898876 687521 1 24678888887755
No 360
>1u07_A TONB protein; beta-hairpin, protein transport; 1.13A {Escherichia coli} SCOP: d.212.1.2 PDB: 2gsk_B* 1ihr_A 1qxx_A
Probab=21.49 E-value=1.1e+02 Score=20.69 Aligned_cols=30 Identities=13% Similarity=0.284 Sum_probs=21.2
Q ss_pred HHHHHhCCccCCCCccceEEEEEcCCCcEEEEEec
Q 024201 183 SISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTIN 217 (271)
Q Consensus 183 ~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~ 217 (271)
..++..|+. | ..--.|.||+||+|....+-
T Consensus 16 ~~a~~~~~~----G-~V~v~~~i~~~G~v~~~~v~ 45 (90)
T 1u07_A 16 ARAQALRIE----G-QVKVKFDVTPDGRVDNVQIL 45 (90)
T ss_dssp HHHHHHTCC----E-EEEEEEEECTTSCEEEEEEE
T ss_pred HHHHHCCCc----e-EEEEEEEECCCCCEEEEEEE
Confidence 456666665 3 24457999999999988664
No 361
>3cpq_A 50S ribosomal protein L30E; RNA-protein, elongation factor, ribonucleoprotein, structural genomics, NPPSFA; 1.90A {Methanocaldococcus jannaschii}
Probab=21.45 E-value=2.2e+02 Score=20.10 Aligned_cols=57 Identities=5% Similarity=-0.121 Sum_probs=34.4
Q ss_pred HHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHHHhCCc
Q 024201 132 SDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVL 191 (271)
Q Consensus 132 ~~~~~~~~~~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ygv~ 191 (271)
.+..+.++.....+|.|..|-+.+.......+-... +.++..+.+...++.+..|..
T Consensus 27 ~~v~kai~~gka~lViiA~D~~~~~~~~l~~~c~~~---~Vp~~~~~~sk~eLG~a~G~~ 83 (110)
T 3cpq_A 27 KRTIKFVKHGEGKLVVLAGNIPKDLEEDVKYYAKLS---NIPVYQHKITSLELGAVCGKP 83 (110)
T ss_dssp HHHHHHHHTTCCSEEEECTTCBHHHHHHHHHHHHHT---TCCEEECCSCHHHHHHHTTCS
T ss_pred HHHHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHc---CCCEEEEcCCHHHHHHHhCCc
Confidence 344455555567888888887666655444443322 344333335668899999876
No 362
>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A
Probab=20.85 E-value=84 Score=22.01 Aligned_cols=55 Identities=5% Similarity=0.010 Sum_probs=32.1
Q ss_pred cCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHHHhCCccCCCCccceEEEEEcCCCcEEEE
Q 024201 141 LNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHS 214 (271)
Q Consensus 141 ~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~ 214 (271)
.|+.-|++.+++.+...+.+++. .+.++..+... .+.. .....|+-|++|.++..
T Consensus 76 ~g~~hiaf~v~di~~~~~~l~~~---------G~~~~~~p~~~----~~~~------g~~~~~~~dPdG~~iEl 130 (133)
T 3hdp_A 76 STPYHICYEVEDIQKSIEEMSQI---------GYTLFKKAEIA----PAID------NRKVAFLFSTDIGLIEL 130 (133)
T ss_dssp CEEEEEEEEESCHHHHHHHHTTT---------TEEEEEEEEEE----GGGT------TEEEEEEEETTTEEEEE
T ss_pred CceEEEEEEcCCHHHHHHHHHHc---------CCccccCCeec----ccCC------CceEEEEECCCceEEEE
Confidence 46778888888765554444433 34444432111 0111 23568899999998775
No 363
>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}
Probab=20.57 E-value=1.5e+02 Score=21.84 Aligned_cols=58 Identities=9% Similarity=-0.005 Sum_probs=36.2
Q ss_pred CcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEEecc
Q 024201 142 NTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINN 218 (271)
Q Consensus 142 gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~~~~ 218 (271)
|+.-+++.+++.++..++.+...+.+ .. ++.+.. + .. .....++.|++|.++.....+
T Consensus 76 g~~hi~f~V~~~~dld~~~~~l~~~G----~~--~~~~~~------~-~~------g~~~~~~~DPdG~~iel~~~~ 133 (160)
T 3r4q_A 76 GQGHFCFYADDKAEVDEWKTRFEALE----IP--VEHYHR------W-PN------GSYSVYIRDPAGNSVEVGEGK 133 (160)
T ss_dssp EECEEEEEESSHHHHHHHHHHHHTTT----CC--CCEEEE------C-TT------SCEEEEEECTTCCEEEEEEGG
T ss_pred ceeEEEEEeCCHHHHHHHHHHHHHCC----CE--Eecccc------c-cC------CcEEEEEECCCCCEEEEEeCC
Confidence 55778888877777777777764432 22 221111 0 00 245689999999999986543
No 364
>2vgl_S AP-2 complex subunit sigma-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Mus musculus} SCOP: i.23.1.1 PDB: 2jkt_I 2jkr_I* 2xa7_S
Probab=20.47 E-value=1.5e+02 Score=22.04 Aligned_cols=19 Identities=16% Similarity=0.195 Sum_probs=14.8
Q ss_pred eEEEEEcCCCcEEEEEecc
Q 024201 200 RGLFIIDKEGVIQHSTINN 218 (271)
Q Consensus 200 P~~~lID~~G~V~~~~~~~ 218 (271)
...+|+|++|+++-...+.
T Consensus 3 ~~i~i~~~~Gk~~l~k~y~ 21 (142)
T 2vgl_S 3 RFILIQNRAGKTRLAKWYM 21 (142)
T ss_dssp EEEEEEETTSCEEEEEECS
T ss_pred EEEEEEcCCCCEEEEEeCC
Confidence 4689999999987775553
No 365
>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*
Probab=20.40 E-value=2.7e+02 Score=20.73 Aligned_cols=53 Identities=15% Similarity=0.141 Sum_probs=31.8
Q ss_pred cCcEEEEEeCCCHHHHHHHHHHhhhcCCCCCcccceEEcCChHHHHHhCCccCCCCccceEEEEEcCCCcEEEEE
Q 024201 141 LNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHST 215 (271)
Q Consensus 141 ~gv~vv~VS~d~~~~~~~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~V~~~~ 215 (271)
.|+.-|++.+++.+...+.++.. + ..++..+.. + . .....|+.|++|.++...
T Consensus 123 ~g~~hi~f~v~dvd~~~~~l~~~-------G--~~~~~~p~~------~-~------~~~~~~~~DPdG~~iel~ 175 (184)
T 2za0_A 123 RGFGHIGIAVPDVYSACKRFEEL-------G--VKFVKKPDD------G-K------MKGLAFIQDPDGYWIEIL 175 (184)
T ss_dssp CCEEEEEEECSCHHHHHHHHHHT-------T--CCEEECTTS------S-S------STTCEEEECTTCCEEEEE
T ss_pred CCeeEEEEEeCCHHHHHHHHHHC-------C--CeeecCCcC------C-C------ceeEEEEECCCCCEEEEE
Confidence 36677888888766555555543 2 233333221 0 0 123478999999999985
No 366
>2h9x_A Toxin CGNA; beta sheet; HET: HYP; NMR {Condylactis gigantea}
Probab=20.39 E-value=33 Score=20.96 Aligned_cols=11 Identities=27% Similarity=0.972 Sum_probs=8.3
Q ss_pred cccCCCCCCCC
Q 024201 244 EVCPAGWKPGD 254 (271)
Q Consensus 244 ~~~p~~~~~~~ 254 (271)
..||.+||.=.
T Consensus 25 ~~C~sGW~kC~ 35 (47)
T 2h9x_A 25 GSCASGWHKCN 35 (47)
T ss_dssp SSCCTTCBCSS
T ss_pred cCCcchhhhhc
Confidence 36999998754
No 367
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=20.24 E-value=2.2e+02 Score=21.00 Aligned_cols=31 Identities=16% Similarity=0.312 Sum_probs=23.7
Q ss_pred cceEEEEEcCCCcEEEEEeccCCCCCCHHHHHHHHHHHH
Q 024201 198 ALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQ 236 (271)
Q Consensus 198 ~~P~~~lID~~G~V~~~~~~~~~~~~~~~e~l~~l~~l~ 236 (271)
..+...|+|.+|+++... ...++++.+...+
T Consensus 128 ~~~~lpVvd~~g~~vGii--------t~~dil~~~~~~~ 158 (180)
T 3sl7_A 128 KFRRLPVVDADGKLIGIL--------TRGNVVRAALQIK 158 (180)
T ss_dssp TTCEEEEECTTCBEEEEE--------EHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCeEEEEE--------EHHHHHHHHHHHh
Confidence 466788999999999985 3577777776544
Done!