Query 024203
Match_columns 271
No_of_seqs 348 out of 4123
Neff 9.2
Searched_HMMs 13730
Date Mon Mar 25 04:11:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024203.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/024203hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ogqa_ c.10.2.8 (A:) Polygala 99.9 9.9E-24 7.2E-28 180.7 14.1 163 22-190 3-172 (313)
2 d1ogqa_ c.10.2.8 (A:) Polygala 99.8 1.6E-21 1.2E-25 166.8 6.1 149 63-216 68-312 (313)
3 d1p9ag_ c.10.2.7 (G:) von Will 99.8 3.3E-18 2.4E-22 142.8 13.9 149 57-212 41-212 (266)
4 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.8 1.9E-18 1.3E-22 137.5 11.3 131 74-211 11-142 (192)
5 d1ozna_ c.10.2.7 (A:) Reticulo 99.8 1.8E-18 1.3E-22 145.7 11.6 146 63-212 97-242 (284)
6 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.7 4.1E-17 3E-21 129.6 12.5 114 71-184 29-143 (192)
7 d1dcea3 c.10.2.2 (A:444-567) R 99.6 2.2E-16 1.6E-20 116.6 8.4 103 74-181 1-104 (124)
8 d1p9ag_ c.10.2.7 (G:) von Will 99.6 2E-15 1.4E-19 125.7 13.4 131 71-208 31-185 (266)
9 d1a9na_ c.10.2.4 (A:) Spliceso 99.6 3E-15 2.2E-19 115.5 10.1 126 67-201 14-145 (162)
10 d1ozna_ c.10.2.7 (A:) Reticulo 99.6 1.6E-14 1.1E-18 121.1 13.4 149 57-209 42-215 (284)
11 d1dcea3 c.10.2.2 (A:444-567) R 99.5 2.8E-14 2E-18 105.0 11.0 100 98-207 1-102 (124)
12 d1xkua_ c.10.2.7 (A:) Decorin 99.5 2.8E-14 2.1E-18 120.5 12.6 143 63-210 142-287 (305)
13 d2ifga3 c.10.2.7 (A:36-191) Hi 99.5 7.8E-14 5.7E-18 106.7 10.9 105 74-180 11-116 (156)
14 d2ifga3 c.10.2.7 (A:36-191) Hi 99.4 1.7E-13 1.3E-17 104.7 10.0 112 95-212 8-120 (156)
15 d1xkua_ c.10.2.7 (A:) Decorin 99.4 4.7E-13 3.4E-17 112.9 13.5 83 120-207 172-254 (305)
16 d1a9na_ c.10.2.4 (A:) Spliceso 99.4 7E-14 5.1E-18 107.6 6.8 109 91-207 14-124 (162)
17 d2omxa2 c.10.2.1 (A:37-235) In 99.4 1.1E-12 8E-17 104.1 11.8 127 67-207 58-184 (199)
18 d1m9la_ c.10.3.1 (A:) Outer ar 99.3 6.2E-15 4.5E-19 117.4 -5.5 114 65-184 42-157 (198)
19 d1h6ta2 c.10.2.1 (A:31-240) In 99.3 5.3E-12 3.8E-16 100.9 11.5 127 67-207 64-190 (210)
20 d1h6ta2 c.10.2.1 (A:31-240) In 99.3 5.6E-12 4.1E-16 100.7 11.2 123 67-203 86-208 (210)
21 d2omxa2 c.10.2.1 (A:37-235) In 99.3 1.3E-11 9.3E-16 97.7 12.9 113 67-189 80-192 (199)
22 d2omza2 c.10.2.1 (A:33-416) In 99.3 6.4E-12 4.6E-16 108.5 10.6 126 67-206 237-362 (384)
23 d1m9la_ c.10.3.1 (A:) Outer ar 99.2 6.3E-14 4.6E-18 111.5 -4.9 112 86-207 39-152 (198)
24 d1h6ua2 c.10.2.1 (A:36-262) In 99.2 8.4E-11 6.1E-15 94.7 12.0 129 67-207 59-207 (227)
25 d2omza2 c.10.2.1 (A:33-416) In 99.1 1.3E-10 9.3E-15 100.1 11.5 123 69-205 261-383 (384)
26 d1h6ua2 c.10.2.1 (A:36-262) In 99.0 4.7E-10 3.4E-14 90.1 10.2 125 67-203 81-225 (227)
27 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.0 1.9E-09 1.4E-13 87.0 10.9 132 66-203 73-233 (242)
28 d1xwdc1 c.10.2.7 (C:18-259) Fo 98.9 1.6E-09 1.1E-13 87.6 9.2 109 72-180 30-141 (242)
29 d1jl5a_ c.10.2.6 (A:) Leucine 98.9 1E-08 7.4E-13 86.5 12.2 96 71-180 38-133 (353)
30 d2astb2 c.10.1.3 (B:2136-2419) 98.6 6.1E-09 4.5E-13 86.5 1.9 133 69-205 69-210 (284)
31 d1jl5a_ c.10.2.6 (A:) Leucine 98.6 1.9E-07 1.4E-11 78.4 10.9 95 95-207 38-132 (353)
32 d1z7xw1 c.10.1.1 (W:1-460) Rib 98.5 5.1E-09 3.7E-13 91.4 -1.7 110 72-181 3-126 (460)
33 d2astb2 c.10.1.3 (B:2136-2419) 98.5 9.8E-09 7.1E-13 85.3 -0.0 137 70-209 45-189 (284)
34 d1koha1 c.10.2.3 (A:201-362) m 98.4 4.8E-09 3.5E-13 79.9 -3.0 66 117-182 63-130 (162)
35 d2ca6a1 c.10.1.2 (A:2-345) Rna 98.4 8.7E-09 6.4E-13 87.6 -2.2 116 92-207 183-314 (344)
36 d1koha1 c.10.2.3 (A:201-362) m 98.3 9.6E-08 7E-12 72.4 3.1 84 90-173 60-152 (162)
37 d2ca6a1 c.10.1.2 (A:2-345) Rna 98.2 3E-08 2.2E-12 84.2 -2.7 38 70-107 92-133 (344)
38 d1z7xw1 c.10.1.1 (W:1-460) Rib 98.1 2.8E-08 2E-12 86.6 -4.4 139 69-207 281-438 (460)
39 d1pgva_ c.10.1.1 (A:) Tropomod 97.7 3.3E-06 2.4E-10 63.9 1.4 63 118-180 43-113 (167)
40 d1pgva_ c.10.1.1 (A:) Tropomod 97.3 4.6E-05 3.3E-09 57.3 3.1 109 69-177 13-141 (167)
41 d1io0a_ c.10.1.1 (A:) Tropomod 97.1 2.2E-05 1.6E-09 59.0 -1.0 63 70-132 16-87 (166)
42 d1io0a_ c.10.1.1 (A:) Tropomod 96.5 9.3E-05 6.8E-09 55.4 -2.0 89 92-180 14-117 (166)
43 d1fftb2 f.17.2.1 (B:27-117) Cy 42.1 3.6 0.00026 26.2 0.8 13 240-252 33-45 (91)
No 1
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.90 E-value=9.9e-24 Score=180.70 Aligned_cols=163 Identities=29% Similarity=0.541 Sum_probs=147.8
Q ss_pred CChhHHHHHHHHHHhCCCCCCcCCCCCCCCCCCCCCCCCCCCCCeeecC----CCeeEEEeeCCCCcc--cCCccCCCCC
Q 024203 22 SDPNDEACLTHLSQSLKDPYKNLQNWTKSTFSNACNGFTSYLPGATCNN----GRIYKLSLTNLSLQG--SISPYLSNCT 95 (271)
Q Consensus 22 ~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~~c~~~~~~~~~~~~~~----~~l~~L~L~~n~l~~--~~p~~l~~l~ 95 (271)
|.++|.+||++||+.+.+|. .+.+|... .|+|. ..|.|+.|+. .+|+.|+|+++.+.| .+|+.+++++
T Consensus 3 c~~~e~~aLl~~k~~~~~~~-~l~sW~~~--~d~C~---~~w~gv~C~~~~~~~~v~~L~L~~~~l~g~~~lp~~l~~L~ 76 (313)
T d1ogqa_ 3 CNPQDKQALLQIKKDLGNPT-TLSSWLPT--TDCCN---RTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLP 76 (313)
T ss_dssp SCHHHHHHHHHHHHHTTCCG-GGTTCCTT--SCTTT---TCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCT
T ss_pred CCHHHHHHHHHHHHHCCCCC-cCCCCCCC--CCCCC---CcCCCeEEeCCCCcEEEEEEECCCCCCCCCCCCChHHhcCc
Confidence 67889999999999998875 68999764 36885 2499999964 269999999999987 5899999999
Q ss_pred CCCEEEccC-CCCCCCCCCCccCCcccceeecccccCCCCCchhhhcCccCCeeeccCCcCCCCCchhccCCCCCCEEEc
Q 024203 96 NLQSLDLSS-NALTGSIPADLQYLVNLAVLNLSANRLAGEIPPQLTLCAYLNVIDLHDNLLTGQIPQQLGLLVRLSAFDV 174 (271)
Q Consensus 96 ~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 174 (271)
+|++|+|++ |+++|.+|+.|.++++|++|++++|++.+..+..+..+..|+.+++++|++.+.+|..+..++.++++++
T Consensus 77 ~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~N~~~~~~p~~l~~l~~L~~l~l 156 (313)
T d1ogqa_ 77 YLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITF 156 (313)
T ss_dssp TCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEEC
T ss_pred cccccccccccccccccccccccccccchhhhccccccccccccccchhhhcccccccccccccCchhhccCcccceeec
Confidence 999999996 8999999999999999999999999999989999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCChhhhcc
Q 024203 175 SNNKLSGPIPASLGNR 190 (271)
Q Consensus 175 ~~N~l~g~ip~~~~~~ 190 (271)
++|.++|.+|..+...
T Consensus 157 ~~n~l~~~ip~~~~~l 172 (313)
T d1ogqa_ 157 DGNRISGAIPDSYGSF 172 (313)
T ss_dssp CSSCCEEECCGGGGCC
T ss_pred cccccccccccccccc
Confidence 9999999999988773
No 2
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.83 E-value=1.6e-21 Score=166.80 Aligned_cols=149 Identities=34% Similarity=0.567 Sum_probs=107.8
Q ss_pred CCCeeecCCCeeEEEeeC-CCCcccCCccCCCCCCCCEEEccCCCCCCC------------------------CCCCccC
Q 024203 63 LPGATCNNGRIYKLSLTN-LSLQGSISPYLSNCTNLQSLDLSSNALTGS------------------------IPADLQY 117 (271)
Q Consensus 63 ~~~~~~~~~~l~~L~L~~-n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~------------------------~p~~~~~ 117 (271)
+|..++++++|++|+|++ |.+.|.+|+.++++++|++|++++|++.+. +|..+..
T Consensus 68 lp~~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~N~~~~~~p~~l~~ 147 (313)
T d1ogqa_ 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISS 147 (313)
T ss_dssp CCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGG
T ss_pred CChHHhcCccccccccccccccccccccccccccccchhhhccccccccccccccchhhhcccccccccccccCchhhcc
Confidence 566677777888888875 677777777777777777777777766543 3444555
Q ss_pred CcccceeecccccCCCCCch------------------------------------------------------------
Q 024203 118 LVNLAVLNLSANRLAGEIPP------------------------------------------------------------ 137 (271)
Q Consensus 118 l~~L~~L~Ls~N~l~~~~p~------------------------------------------------------------ 137 (271)
++.++.+++++|.+++.+|.
T Consensus 148 l~~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~~~~l~l~~~~~~~~~~~~~~~~~~l~~l~ 227 (313)
T d1ogqa_ 148 LPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIH 227 (313)
T ss_dssp CTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEECCSSEEEECCGGGCCTTSCCSEEE
T ss_pred Ccccceeecccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 55666666666655443332
Q ss_pred -----------hhhcCccCCeeeccCCcCCCCCchhccCCCCCCEEEccCCCCCCCCChhhhccCCCCCCccCCCCcCCC
Q 024203 138 -----------QLTLCAYLNVIDLHDNLLTGQIPQQLGLLVRLSAFDVSNNKLSGPIPASLGNRSGNLPKFNASSFEGNK 206 (271)
Q Consensus 138 -----------~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~~l~~l~~~~~~~N~ 206 (271)
.++.+++|+.|++++|+++|.+|..++++++|++|++++|+|+|.+|. ++ .+++++.+++.+|+
T Consensus 228 ~~~~~l~~~~~~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP~-~~----~L~~L~~l~l~~N~ 302 (313)
T d1ogqa_ 228 LAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ-GG----NLQRFDVSAYANNK 302 (313)
T ss_dssp CCSSEECCBGGGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCC-ST----TGGGSCGGGTCSSS
T ss_pred cccccccccccccccccccccccCccCeecccCChHHhCCCCCCEEECcCCcccccCCC-cc----cCCCCCHHHhCCCc
Confidence 123346677888888888888888888888888888888888888884 23 37788889999999
Q ss_pred CCCCCCCCCC
Q 024203 207 DLYGYPLPPM 216 (271)
Q Consensus 207 ~~c~~~~~~~ 216 (271)
.+||.|+|.|
T Consensus 303 ~l~g~plp~c 312 (313)
T d1ogqa_ 303 CLCGSPLPAC 312 (313)
T ss_dssp EEESTTSSCC
T ss_pred cccCCCCCCC
Confidence 9999988765
No 3
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.76 E-value=3.3e-18 Score=142.84 Aligned_cols=149 Identities=25% Similarity=0.201 Sum_probs=102.9
Q ss_pred CCCCCCCCCeeecCCCeeEEEeeCCCCcccCCccCCCCCCCCEEEccCCCCC-----------------------CCCCC
Q 024203 57 NGFTSYLPGATCNNGRIYKLSLTNLSLQGSISPYLSNCTNLQSLDLSSNALT-----------------------GSIPA 113 (271)
Q Consensus 57 ~~~~~~~~~~~~~~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~-----------------------~~~p~ 113 (271)
|.+....++.+.++++|++|+|++|.++ .+| .+..+++|++|++++|+++ +..+.
T Consensus 41 N~i~~l~~~~f~~l~~L~~L~L~~N~l~-~l~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~l~~~~~~~~~~~ 118 (266)
T d1p9ag_ 41 NLLYTFSLATLMPYTRLTQLNLDRAELT-KLQ-VDGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLG 118 (266)
T ss_dssp SCCSEEEGGGGTTCTTCCEEECTTSCCC-EEE-CCSCCTTCCEEECCSSCCSSCCCCTTTCTTCCEEECCSSCCCCCCSS
T ss_pred CcCCCcCHHHhhcccccccccccccccc-ccc-cccccccccccccccccccccccccccccccccccccccccceeecc
Confidence 4443333344556666666666666665 333 2345566666666666655 23333
Q ss_pred CccCCcccceeecccccCCCCCchhhhcCccCCeeeccCCcCCCCCchhccCCCCCCEEEccCCCCCCCCChhhhccCCC
Q 024203 114 DLQYLVNLAVLNLSANRLAGEIPPQLTLCAYLNVIDLHDNLLTGQIPQQLGLLVRLSAFDVSNNKLSGPIPASLGNRSGN 193 (271)
Q Consensus 114 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~~ 193 (271)
.+..+.++++|++++|.++...+..+..++.++.+++++|++++..+..+..+++|++|++++|+|+ .+|+.+..
T Consensus 119 ~~~~l~~l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~L~-~lp~~~~~---- 193 (266)
T d1p9ag_ 119 ALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFG---- 193 (266)
T ss_dssp TTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTT----
T ss_pred ccccccccccccccccccceeccccccccccchhcccccccccccCccccccccccceeecccCCCc-ccChhHCC----
Confidence 3344445555555555555444555667888999999999999777788899999999999999999 88988776
Q ss_pred CCCccCCCCcCCCCCCCCC
Q 024203 194 LPKFNASSFEGNKDLYGYP 212 (271)
Q Consensus 194 l~~l~~~~~~~N~~~c~~~ 212 (271)
++.++.+++.||||.|+|.
T Consensus 194 ~~~L~~L~L~~Np~~CdC~ 212 (266)
T d1p9ag_ 194 SHLLPFAFLHGNPWLCNCE 212 (266)
T ss_dssp TCCCSEEECCSCCBCCSGG
T ss_pred CCCCCEEEecCCCCCCCcc
Confidence 7788899999999999863
No 4
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.76 E-value=1.9e-18 Score=137.51 Aligned_cols=131 Identities=19% Similarity=0.212 Sum_probs=101.4
Q ss_pred eEEEeeCCCCcccCCccCCCCCCCCEEEccCCCCCCCC-CCCccCCcccceeecccccCCCCCchhhhcCccCCeeeccC
Q 024203 74 YKLSLTNLSLQGSISPYLSNCTNLQSLDLSSNALTGSI-PADLQYLVNLAVLNLSANRLAGEIPPQLTLCAYLNVIDLHD 152 (271)
Q Consensus 74 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 152 (271)
+.++.++++++ .+|..+. +++++|+|++|++++.+ +..|..+++|+.|++++|.+....+..+..+++|++|++++
T Consensus 11 ~~v~Cs~~~L~-~iP~~lp--~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~ 87 (192)
T d1w8aa_ 11 TTVDCTGRGLK-EIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEEeCCCcC-ccCCCCC--CCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeecc
Confidence 35677788887 6776654 67888888888887534 45567788888888888888877778888888888888888
Q ss_pred CcCCCCCchhccCCCCCCEEEccCCCCCCCCChhhhccCCCCCCccCCCCcCCCCCCCC
Q 024203 153 NLLTGQIPQQLGLLVRLSAFDVSNNKLSGPIPASLGNRSGNLPKFNASSFEGNKDLYGY 211 (271)
Q Consensus 153 N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~~l~~l~~~~~~~N~~~c~~ 211 (271)
|++++..|..|.++++|++|+|++|+|++..|..+.. ++.++.+++++|++.|.+
T Consensus 88 N~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~----l~~L~~l~L~~N~~~~~~ 142 (192)
T d1w8aa_ 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEH----LNSLTSLNLASNPFNCNC 142 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTT----CTTCCEEECTTCCBCCSG
T ss_pred ccccccCHHHHhCCCcccccccCCccccccCHHHhcC----Cccccccccccccccccc
Confidence 8888666777888888888888888888655655555 677788888888887764
No 5
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.76 E-value=1.8e-18 Score=145.67 Aligned_cols=146 Identities=24% Similarity=0.192 Sum_probs=130.7
Q ss_pred CCCeeecCCCeeEEEeeCCCCcccCCccCCCCCCCCEEEccCCCCCCCCCCCccCCcccceeecccccCCCCCchhhhcC
Q 024203 63 LPGATCNNGRIYKLSLTNLSLQGSISPYLSNCTNLQSLDLSSNALTGSIPADLQYLVNLAVLNLSANRLAGEIPPQLTLC 142 (271)
Q Consensus 63 ~~~~~~~~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 142 (271)
-+..+++++++++|++++|.+....+..+...++|+.+++++|.+++..+..|..+++|+.|++++|++++..+..+.++
T Consensus 97 ~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~~~~f~~l 176 (284)
T d1ozna_ 97 DPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGL 176 (284)
T ss_dssp CTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTC
T ss_pred cchhhcccccCCEEecCCcccccccccccchhcccchhhhccccccccChhHhccccchhhcccccCcccccchhhhccc
Confidence 35567788999999999999986667778889999999999999996667778889999999999999998888899999
Q ss_pred ccCCeeeccCCcCCCCCchhccCCCCCCEEEccCCCCCCCCChhhhccCCCCCCccCCCCcCCCCCCCCC
Q 024203 143 AYLNVIDLHDNLLTGQIPQQLGLLVRLSAFDVSNNKLSGPIPASLGNRSGNLPKFNASSFEGNKDLYGYP 212 (271)
Q Consensus 143 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~~l~~l~~~~~~~N~~~c~~~ 212 (271)
++|+.+++++|++++..|..|..+++|++|++++|.+.+..|..+.+ ++.++.+++++|++.|+|+
T Consensus 177 ~~L~~l~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~----~~~L~~L~l~~N~l~C~C~ 242 (284)
T d1ozna_ 177 HSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAP----LRALQYLRLNDNPWVCDCR 242 (284)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTT----CTTCCEEECCSSCEECSGG
T ss_pred cccchhhhhhccccccChhHhhhhhhccccccccccccccccccccc----ccccCEEEecCCCCCCCcc
Confidence 99999999999999888999999999999999999999777777766 7788999999999999753
No 6
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.71 E-value=4.1e-17 Score=129.59 Aligned_cols=114 Identities=19% Similarity=0.235 Sum_probs=103.3
Q ss_pred CCeeEEEeeCCCCcccC-CccCCCCCCCCEEEccCCCCCCCCCCCccCCcccceeecccccCCCCCchhhhcCccCCeee
Q 024203 71 GRIYKLSLTNLSLQGSI-SPYLSNCTNLQSLDLSSNALTGSIPADLQYLVNLAVLNLSANRLAGEIPPQLTLCAYLNVID 149 (271)
Q Consensus 71 ~~l~~L~L~~n~l~~~~-p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 149 (271)
.++++|+|++|.+++.+ +..|..+++|++|++++|.+.+..+..+..+++|++|++++|+++...|..|.++++|++|+
T Consensus 29 ~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N~l~~l~~~~F~~l~~L~~L~ 108 (192)
T d1w8aa_ 29 LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLN 108 (192)
T ss_dssp TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEE
T ss_pred CCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeeccccccccCHHHHhCCCcccccc
Confidence 57899999999998655 55678899999999999999988888999999999999999999987788899999999999
Q ss_pred ccCCcCCCCCchhccCCCCCCEEEccCCCCCCCCC
Q 024203 150 LHDNLLTGQIPQQLGLLVRLSAFDVSNNKLSGPIP 184 (271)
Q Consensus 150 Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~ip 184 (271)
|++|+|++..|..|..+++|+++++++|++....+
T Consensus 109 L~~N~l~~i~~~~f~~l~~L~~l~L~~N~~~~~~~ 143 (192)
T d1w8aa_ 109 LYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred cCCccccccCHHHhcCCcccccccccccccccccc
Confidence 99999998788889999999999999999875433
No 7
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.64 E-value=2.2e-16 Score=116.57 Aligned_cols=103 Identities=28% Similarity=0.288 Sum_probs=87.7
Q ss_pred eEEEeeCCCCcccCCccCCCCCCCCEEEccCCCCCCCCCCCccCCcccceeecccccCCCCCchhhhcCccCCeeeccCC
Q 024203 74 YKLSLTNLSLQGSISPYLSNCTNLQSLDLSSNALTGSIPADLQYLVNLAVLNLSANRLAGEIPPQLTLCAYLNVIDLHDN 153 (271)
Q Consensus 74 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 153 (271)
+.|++++|.++ .++ .+..+++|++|++++|.++ .+|+.+..+++|+.|++++|.++ .+| .+..+++|+++++++|
T Consensus 1 R~L~Ls~n~l~-~l~-~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~-~l~-~~~~l~~L~~L~l~~N 75 (124)
T d1dcea3 1 RVLHLAHKDLT-VLC-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALE-NVD-GVANLPRLQELLLCNN 75 (124)
T ss_dssp SEEECTTSCCS-SCC-CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCG-GGTTCSSCCEEECCSS
T ss_pred CEEEcCCCCCC-CCc-ccccCCCCCEEECCCCccC-cchhhhhhhhccccccccccccc-ccC-ccccccccCeEECCCC
Confidence 46899999998 555 4888999999999999998 77888999999999999999998 455 4889999999999999
Q ss_pred cCCCCC-chhccCCCCCCEEEccCCCCCC
Q 024203 154 LLTGQI-PQQLGLLVRLSAFDVSNNKLSG 181 (271)
Q Consensus 154 ~l~~~~-p~~~~~l~~L~~L~l~~N~l~g 181 (271)
+++... ...+..+++|+++++++|+++.
T Consensus 76 ~i~~~~~~~~l~~~~~L~~L~l~~N~i~~ 104 (124)
T d1dcea3 76 RLQQSAAIQPLVSCPRLVLLNLQGNSLCQ 104 (124)
T ss_dssp CCCSSSTTGGGGGCTTCCEEECTTSGGGG
T ss_pred ccCCCCCchhhcCCCCCCEEECCCCcCCc
Confidence 998432 2567889999999999999873
No 8
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.62 E-value=2e-15 Score=125.68 Aligned_cols=131 Identities=24% Similarity=0.188 Sum_probs=96.2
Q ss_pred CCeeEEEeeCCCCcccCCccCCCCCCCCEEEccCCCCCCCCCCCccCCcccceeecccccCCCCCchhhhcCccCCeeec
Q 024203 71 GRIYKLSLTNLSLQGSISPYLSNCTNLQSLDLSSNALTGSIPADLQYLVNLAVLNLSANRLAGEIPPQLTLCAYLNVIDL 150 (271)
Q Consensus 71 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 150 (271)
+++++|+|++|.+++..+..|.++++|++|+|++|+++ .+| .+..+++|++|++++|+++ ..+..+..+++|+.|++
T Consensus 31 ~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~-~l~-~~~~l~~L~~L~Ls~N~l~-~~~~~~~~l~~L~~L~l 107 (266)
T d1p9ag_ 31 KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELT-KLQ-VDGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDV 107 (266)
T ss_dssp TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCC-EEE-CCSCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEEC
T ss_pred cCCCEEECcCCcCCCcCHHHhhcccccccccccccccc-ccc-ccccccccccccccccccc-ccccccccccccccccc
Confidence 57899999999999666678999999999999999998 555 3567899999999999998 45666677777777777
Q ss_pred cCCcCCCCCc------------------------hhccCCCCCCEEEccCCCCCCCCChhhhccCCCCCCccCCCCcCCC
Q 024203 151 HDNLLTGQIP------------------------QQLGLLVRLSAFDVSNNKLSGPIPASLGNRSGNLPKFNASSFEGNK 206 (271)
Q Consensus 151 s~N~l~~~~p------------------------~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~~l~~l~~~~~~~N~ 206 (271)
++|.+....+ ..+..+++++.+++++|++++..+..+.. +++++.+++++|.
T Consensus 108 ~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~~N~l~~~~~~~~~~----l~~L~~L~Ls~N~ 183 (266)
T d1p9ag_ 108 SFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNG----LENLDTLLLQENS 183 (266)
T ss_dssp CSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTT----CTTCCEEECCSSC
T ss_pred cccccceeeccccccccccccccccccccceeccccccccccchhcccccccccccCcccccc----ccccceeecccCC
Confidence 7666554333 33445556666666666666544444444 6777788888887
Q ss_pred CC
Q 024203 207 DL 208 (271)
Q Consensus 207 ~~ 208 (271)
..
T Consensus 184 L~ 185 (266)
T d1p9ag_ 184 LY 185 (266)
T ss_dssp CC
T ss_pred Cc
Confidence 43
No 9
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=3e-15 Score=115.53 Aligned_cols=126 Identities=17% Similarity=0.187 Sum_probs=103.2
Q ss_pred eecCCCeeEEEeeCCCCcccCCccCCCCCCCCEEEccCCCCCCCCCCCccCCcccceeecccccCCCCCchhhhcCccCC
Q 024203 67 TCNNGRIYKLSLTNLSLQGSISPYLSNCTNLQSLDLSSNALTGSIPADLQYLVNLAVLNLSANRLAGEIPPQLTLCAYLN 146 (271)
Q Consensus 67 ~~~~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 146 (271)
+.+..+++.|+|++|.++ .++..+..+++|+.|++++|.++ .++ .+..+++|++|++++|+++...+..+..+++|+
T Consensus 14 ~~n~~~lr~L~L~~n~I~-~i~~~~~~l~~L~~L~Ls~N~i~-~l~-~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~ 90 (162)
T d1a9na_ 14 YTNAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIR-KLD-GFPLLRRLKTLLVNNNRICRIGEGLDQALPDLT 90 (162)
T ss_dssp EECTTSCEEEECTTSCCC-SCCCGGGGTTCCSEEECCSSCCC-EEC-CCCCCSSCCEEECCSSCCCEECSCHHHHCTTCC
T ss_pred ccCcCcCcEEECCCCCCC-ccCccccccccCCEEECCCCCCC-ccC-CcccCcchhhhhcccccccCCCccccccccccc
Confidence 446678999999999999 56776678999999999999998 554 588999999999999999965555667899999
Q ss_pred eeeccCCcCCCCCc--hhccCCCCCCEEEccCCCCCCCCCh----hhhccCCCCCCccCCC
Q 024203 147 VIDLHDNLLTGQIP--QQLGLLVRLSAFDVSNNKLSGPIPA----SLGNRSGNLPKFNASS 201 (271)
Q Consensus 147 ~L~Ls~N~l~~~~p--~~~~~l~~L~~L~l~~N~l~g~ip~----~~~~~~~~l~~l~~~~ 201 (271)
.|++++|+++ .++ ..+..+++|+++++++|+++ ..|. .+.. +|+++.++
T Consensus 91 ~L~L~~N~i~-~~~~l~~l~~l~~L~~L~l~~N~i~-~~~~~r~~~i~~----lp~L~~LD 145 (162)
T d1a9na_ 91 ELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYK----VPQVRVLD 145 (162)
T ss_dssp EEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHH----CTTCSEET
T ss_pred cceecccccc-ccccccccccccccchhhcCCCccc-cccchHHHHHHH----CCCcCeeC
Confidence 9999999998 444 46788999999999999997 4553 2343 66666554
No 10
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.56 E-value=1.6e-14 Score=121.10 Aligned_cols=149 Identities=17% Similarity=0.102 Sum_probs=113.7
Q ss_pred CCCCCCCCCeeecCCCeeEEEeeCCCCcc-------------------------cCCccCCCCCCCCEEEccCCCCCCCC
Q 024203 57 NGFTSYLPGATCNNGRIYKLSLTNLSLQG-------------------------SISPYLSNCTNLQSLDLSSNALTGSI 111 (271)
Q Consensus 57 ~~~~~~~~~~~~~~~~l~~L~L~~n~l~~-------------------------~~p~~l~~l~~L~~L~Ls~N~l~~~~ 111 (271)
|.+....++.+.++++|++|++++|.+.. ..+..+.++++|++|++++|.+....
T Consensus 42 N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~l~~L~~L~l~~n~~~~~~ 121 (284)
T d1ozna_ 42 NRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELG 121 (284)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCC
T ss_pred CcCCCCCHHHhhccccccccccccccccccccccccccccccccccccccccccccchhhcccccCCEEecCCccccccc
Confidence 44443334456667777888887776542 12445677788888888888887666
Q ss_pred CCCccCCcccceeecccccCCCCCchhhhcCccCCeeeccCCcCCCCCchhccCCCCCCEEEccCCCCCCCCChhhhccC
Q 024203 112 PADLQYLVNLAVLNLSANRLAGEIPPQLTLCAYLNVIDLHDNLLTGQIPQQLGLLVRLSAFDVSNNKLSGPIPASLGNRS 191 (271)
Q Consensus 112 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~ 191 (271)
+..+..+.+|+.+++++|.+++..+..|..+++|+.|++++|++++..+..|.++++|+++++++|.+++..|..+.+
T Consensus 122 ~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~~~~f~~l~~L~~l~l~~N~l~~i~~~~f~~-- 199 (284)
T d1ozna_ 122 PGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRD-- 199 (284)
T ss_dssp TTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTT--
T ss_pred ccccchhcccchhhhccccccccChhHhccccchhhcccccCcccccchhhhccccccchhhhhhccccccChhHhhh--
Confidence 667777888888889988888666677888888999999999988777778888899999999999998777887776
Q ss_pred CCCCCccCCCCcCCCCCC
Q 024203 192 GNLPKFNASSFEGNKDLY 209 (271)
Q Consensus 192 ~~l~~l~~~~~~~N~~~c 209 (271)
+++++.+++++|....
T Consensus 200 --l~~L~~L~l~~N~i~~ 215 (284)
T d1ozna_ 200 --LGRLMTLYLFANNLSA 215 (284)
T ss_dssp --CTTCCEEECCSSCCSC
T ss_pred --hhhccccccccccccc
Confidence 7778888888887543
No 11
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.53 E-value=2.8e-14 Score=105.02 Aligned_cols=100 Identities=30% Similarity=0.433 Sum_probs=87.0
Q ss_pred CEEEccCCCCCCCCCCCccCCcccceeecccccCCCCCchhhhcCccCCeeeccCCcCCCCCchhccCCCCCCEEEccCC
Q 024203 98 QSLDLSSNALTGSIPADLQYLVNLAVLNLSANRLAGEIPPQLTLCAYLNVIDLHDNLLTGQIPQQLGLLVRLSAFDVSNN 177 (271)
Q Consensus 98 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N 177 (271)
+.|++++|+++ .++ .+..+++|++|++++|+++ .+|..++.+++|++|++++|.++ .+| .+..+++|++|++++|
T Consensus 1 R~L~Ls~n~l~-~l~-~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~-~l~-~~~~l~~L~~L~l~~N 75 (124)
T d1dcea3 1 RVLHLAHKDLT-VLC-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALE-NVD-GVANLPRLQELLLCNN 75 (124)
T ss_dssp SEEECTTSCCS-SCC-CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCG-GGTTCSSCCEEECCSS
T ss_pred CEEEcCCCCCC-CCc-ccccCCCCCEEECCCCccC-cchhhhhhhhccccccccccccc-ccC-ccccccccCeEECCCC
Confidence 57999999998 555 5899999999999999998 68888999999999999999999 566 4899999999999999
Q ss_pred CCCCCCC--hhhhccCCCCCCccCCCCcCCCC
Q 024203 178 KLSGPIP--ASLGNRSGNLPKFNASSFEGNKD 207 (271)
Q Consensus 178 ~l~g~ip--~~~~~~~~~l~~l~~~~~~~N~~ 207 (271)
+++. +| ..+.. +++++.+++++|+.
T Consensus 76 ~i~~-~~~~~~l~~----~~~L~~L~l~~N~i 102 (124)
T d1dcea3 76 RLQQ-SAAIQPLVS----CPRLVLLNLQGNSL 102 (124)
T ss_dssp CCCS-SSTTGGGGG----CTTCCEEECTTSGG
T ss_pred ccCC-CCCchhhcC----CCCCCEEECCCCcC
Confidence 9984 44 34444 78899999999984
No 12
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.53 E-value=2.8e-14 Score=120.55 Aligned_cols=143 Identities=23% Similarity=0.238 Sum_probs=120.3
Q ss_pred CCCeeecCCCeeEEEeeCCCCcccCCccCCCCCCCCEEEccCCCCCCCCCCCccCCcccceeecccccCCCCCchhhhcC
Q 024203 63 LPGATCNNGRIYKLSLTNLSLQGSISPYLSNCTNLQSLDLSSNALTGSIPADLQYLVNLAVLNLSANRLAGEIPPQLTLC 142 (271)
Q Consensus 63 ~~~~~~~~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 142 (271)
.+..+..+++++.+++++|.+. .+|..+ +++|+.|++++|..++..+..+..++.++.|++++|.+++..+..+.++
T Consensus 142 ~~~~~~~l~~L~~l~l~~n~l~-~l~~~~--~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l 218 (305)
T d1xkua_ 142 ENGAFQGMKKLSYIRIADTNIT-TIPQGL--PPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANT 218 (305)
T ss_dssp CTTGGGGCTTCCEEECCSSCCC-SCCSSC--CTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGS
T ss_pred CccccccccccCccccccCCcc-ccCccc--CCccCEEECCCCcCCCCChhHhhcccccccccccccccccccccccccc
Confidence 3445566789999999999988 566543 6899999999999998888899999999999999999998888899999
Q ss_pred ccCCeeeccCCcCCCCCchhccCCCCCCEEEccCCCCCCCCChh-hhc--cCCCCCCccCCCCcCCCCCCC
Q 024203 143 AYLNVIDLHDNLLTGQIPQQLGLLVRLSAFDVSNNKLSGPIPAS-LGN--RSGNLPKFNASSFEGNKDLYG 210 (271)
Q Consensus 143 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~ip~~-~~~--~~~~l~~l~~~~~~~N~~~c~ 210 (271)
++|++|+|++|+++ .+|..+..+++|++|++++|+++ .++.. +.. .......++.+++.+|++.+.
T Consensus 219 ~~L~~L~L~~N~L~-~lp~~l~~l~~L~~L~Ls~N~i~-~i~~~~f~~~~~~~~~~~L~~L~L~~N~~~~~ 287 (305)
T d1xkua_ 219 PHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNIS-AIGSNDFCPPGYNTKKASYSGVSLFSNPVQYW 287 (305)
T ss_dssp TTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCC-CCCTTSSSCSSCCTTSCCCSEEECCSSSSCGG
T ss_pred ccceeeeccccccc-ccccccccccCCCEEECCCCccC-ccChhhccCcchhcccCCCCEEECCCCcCccC
Confidence 99999999999999 78889999999999999999998 55543 321 223456788889999998653
No 13
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.49 E-value=7.8e-14 Score=106.70 Aligned_cols=105 Identities=21% Similarity=0.137 Sum_probs=83.3
Q ss_pred eEEEeeCCCCcccCCccCCCCCCCCEEEccCC-CCCCCCCCCccCCcccceeecccccCCCCCchhhhcCccCCeeeccC
Q 024203 74 YKLSLTNLSLQGSISPYLSNCTNLQSLDLSSN-ALTGSIPADLQYLVNLAVLNLSANRLAGEIPPQLTLCAYLNVIDLHD 152 (271)
Q Consensus 74 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 152 (271)
+.++.+++++. ..|..+..+++|++|++++| .++...+..|..+++|+.|++++|+++...|..|..+++|++|+|++
T Consensus 11 ~~l~c~~~~~~-~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~ 89 (156)
T d2ifga3 11 SGLRCTRDGAL-DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (156)
T ss_dssp SCEECCSSCCC-TTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred CeEEecCCCCc-cCcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceeccC
Confidence 45677777777 57778888899999999766 47755556788899999999999999877778888899999999999
Q ss_pred CcCCCCCchhccCCCCCCEEEccCCCCC
Q 024203 153 NLLTGQIPQQLGLLVRLSAFDVSNNKLS 180 (271)
Q Consensus 153 N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 180 (271)
|+++ .+|.......+|+.|++++|++.
T Consensus 90 N~l~-~l~~~~~~~~~l~~L~L~~Np~~ 116 (156)
T d2ifga3 90 NALE-SLSWKTVQGLSLQELVLSGNPLH 116 (156)
T ss_dssp SCCS-CCCSTTTCSCCCCEEECCSSCCC
T ss_pred CCCc-ccChhhhccccccccccCCCccc
Confidence 9998 55554444457889999999885
No 14
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.45 E-value=1.7e-13 Score=104.74 Aligned_cols=112 Identities=16% Similarity=0.071 Sum_probs=92.1
Q ss_pred CCCCEEEccCCCCCCCCCCCccCCcccceeecccc-cCCCCCchhhhcCccCCeeeccCCcCCCCCchhccCCCCCCEEE
Q 024203 95 TNLQSLDLSSNALTGSIPADLQYLVNLAVLNLSAN-RLAGEIPPQLTLCAYLNVIDLHDNLLTGQIPQQLGLLVRLSAFD 173 (271)
Q Consensus 95 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 173 (271)
...+.++.+++.+. ..|..+..+++|+.|++++| .++...+..|.++++|+.|++++|+++...|..|..+++|++|+
T Consensus 8 ~~~~~l~c~~~~~~-~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~ 86 (156)
T d2ifga3 8 HGSSGLRCTRDGAL-DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLN 86 (156)
T ss_dssp SSSSCEECCSSCCC-TTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEE
T ss_pred CCCCeEEecCCCCc-cCcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCccccccccccccccee
Confidence 44567888888887 67888888999999999766 48866667889999999999999999977788899999999999
Q ss_pred ccCCCCCCCCChhhhccCCCCCCccCCCCcCCCCCCCCC
Q 024203 174 VSNNKLSGPIPASLGNRSGNLPKFNASSFEGNKDLYGYP 212 (271)
Q Consensus 174 l~~N~l~g~ip~~~~~~~~~l~~l~~~~~~~N~~~c~~~ 212 (271)
|++|+++ .+|..... ...+..+++++||+.|+|.
T Consensus 87 Ls~N~l~-~l~~~~~~----~~~l~~L~L~~Np~~C~C~ 120 (156)
T d2ifga3 87 LSFNALE-SLSWKTVQ----GLSLQELVLSGNPLHCSCA 120 (156)
T ss_dssp CCSSCCS-CCCSTTTC----SCCCCEEECCSSCCCCCGG
T ss_pred ccCCCCc-ccChhhhc----cccccccccCCCcccCCch
Confidence 9999998 66665544 3357788999999998763
No 15
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.45 E-value=4.7e-13 Score=112.89 Aligned_cols=83 Identities=20% Similarity=0.223 Sum_probs=57.9
Q ss_pred ccceeecccccCCCCCchhhhcCccCCeeeccCCcCCCCCchhccCCCCCCEEEccCCCCCCCCChhhhccCCCCCCccC
Q 024203 120 NLAVLNLSANRLAGEIPPQLTLCAYLNVIDLHDNLLTGQIPQQLGLLVRLSAFDVSNNKLSGPIPASLGNRSGNLPKFNA 199 (271)
Q Consensus 120 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~~l~~l~~ 199 (271)
+|+.|++++|..++..+..+..++.++.|++++|.+++..+..+..+++|++|++++|.++ .+|..+.+ +++++.
T Consensus 172 ~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L~-~lp~~l~~----l~~L~~ 246 (305)
T d1xkua_ 172 SLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLAD----HKYIQV 246 (305)
T ss_dssp TCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTT----CSSCCE
T ss_pred ccCEEECCCCcCCCCChhHhhccccccccccccccccccccccccccccceeeeccccccc-cccccccc----ccCCCE
Confidence 3444444444444445555666677777777788777666777777888888888888887 66777665 777888
Q ss_pred CCCcCCCC
Q 024203 200 SSFEGNKD 207 (271)
Q Consensus 200 ~~~~~N~~ 207 (271)
+++++|+.
T Consensus 247 L~Ls~N~i 254 (305)
T d1xkua_ 247 VYLHNNNI 254 (305)
T ss_dssp EECCSSCC
T ss_pred EECCCCcc
Confidence 88888763
No 16
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.43 E-value=7e-14 Score=107.65 Aligned_cols=109 Identities=17% Similarity=0.167 Sum_probs=91.3
Q ss_pred CCCCCCCCEEEccCCCCCCCCCCCccCCcccceeecccccCCCCCchhhhcCccCCeeeccCCcCCCCCchhccCCCCCC
Q 024203 91 LSNCTNLQSLDLSSNALTGSIPADLQYLVNLAVLNLSANRLAGEIPPQLTLCAYLNVIDLHDNLLTGQIPQQLGLLVRLS 170 (271)
Q Consensus 91 l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 170 (271)
+.+...+++|+|++|+++ .++..+..+++|+.|++++|.++ .++ .+..+++|++|++++|+++...+..+..+++|+
T Consensus 14 ~~n~~~lr~L~L~~n~I~-~i~~~~~~l~~L~~L~Ls~N~i~-~l~-~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~ 90 (162)
T d1a9na_ 14 YTNAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIR-KLD-GFPLLRRLKTLLVNNNRICRIGEGLDQALPDLT 90 (162)
T ss_dssp EECTTSCEEEECTTSCCC-SCCCGGGGTTCCSEEECCSSCCC-EEC-CCCCCSSCCEEECCSSCCCEECSCHHHHCTTCC
T ss_pred ccCcCcCcEEECCCCCCC-ccCccccccccCCEEECCCCCCC-ccC-CcccCcchhhhhcccccccCCCccccccccccc
Confidence 567788999999999999 66766678999999999999998 454 578899999999999999955555567899999
Q ss_pred EEEccCCCCCCCCCh--hhhccCCCCCCccCCCCcCCCC
Q 024203 171 AFDVSNNKLSGPIPA--SLGNRSGNLPKFNASSFEGNKD 207 (271)
Q Consensus 171 ~L~l~~N~l~g~ip~--~~~~~~~~l~~l~~~~~~~N~~ 207 (271)
+|++++|+++ .+++ .+.. +++++.+++.+|+.
T Consensus 91 ~L~L~~N~i~-~~~~l~~l~~----l~~L~~L~l~~N~i 124 (162)
T d1a9na_ 91 ELILTNNSLV-ELGDLDPLAS----LKSLTYLCILRNPV 124 (162)
T ss_dssp EEECCSCCCC-CGGGGGGGGG----CTTCCEEECCSSGG
T ss_pred cceecccccc-cccccccccc----ccccchhhcCCCcc
Confidence 9999999998 4443 3444 78899999999984
No 17
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.40 E-value=1.1e-12 Score=104.06 Aligned_cols=127 Identities=27% Similarity=0.391 Sum_probs=103.3
Q ss_pred eecCCCeeEEEeeCCCCcccCCccCCCCCCCCEEEccCCCCCCCCCCCccCCcccceeecccccCCCCCchhhhcCccCC
Q 024203 67 TCNNGRIYKLSLTNLSLQGSISPYLSNCTNLQSLDLSSNALTGSIPADLQYLVNLAVLNLSANRLAGEIPPQLTLCAYLN 146 (271)
Q Consensus 67 ~~~~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 146 (271)
+..+++|++|++++|.+++ +++ +.++++|++|++++|.+. .++ .+..++.|+.|++++|.+.. + ..+..+++|+
T Consensus 58 l~~l~nL~~L~Ls~N~l~~-~~~-l~~l~~L~~L~l~~n~~~-~~~-~l~~l~~L~~L~l~~~~~~~-~-~~~~~l~~L~ 131 (199)
T d2omxa2 58 VEYLNNLTQINFSNNQLTD-ITP-LKNLTKLVDILMNNNQIA-DIT-PLANLTNLTGLTLFNNQITD-I-DPLKNLTNLN 131 (199)
T ss_dssp GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCC-CCG-GGTTCTTCSEEECCSSCCCC-C-GGGTTCTTCS
T ss_pred cccCCCcCcCccccccccC-ccc-ccCCcccccccccccccc-ccc-cccccccccccccccccccc-c-cccchhhhhH
Confidence 4568899999999999985 333 888999999999999887 444 47889999999999998874 3 3577889999
Q ss_pred eeeccCCcCCCCCchhccCCCCCCEEEccCCCCCCCCChhhhccCCCCCCccCCCCcCCCC
Q 024203 147 VIDLHDNLLTGQIPQQLGLLVRLSAFDVSNNKLSGPIPASLGNRSGNLPKFNASSFEGNKD 207 (271)
Q Consensus 147 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~~l~~l~~~~~~~N~~ 207 (271)
.+++++|++. .++ .+..+++|+.|++.+|++++ ++ .+.+ +++++.+++++|+.
T Consensus 132 ~L~l~~n~l~-~~~-~l~~~~~L~~L~l~~n~l~~-l~-~l~~----l~~L~~L~ls~N~i 184 (199)
T d2omxa2 132 RLELSSNTIS-DIS-ALSGLTSLQQLNFSSNQVTD-LK-PLAN----LTTLERLDISSNKV 184 (199)
T ss_dssp EEECCSSCCC-CCG-GGTTCTTCSEEECCSSCCCC-CG-GGTT----CTTCCEEECCSSCC
T ss_pred Hhhhhhhhhc-ccc-cccccccccccccccccccC-Cc-cccC----CCCCCEEECCCCCC
Confidence 9999999988 454 47889999999999999985 43 2444 78889999999863
No 18
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.33 E-value=6.2e-15 Score=117.44 Aligned_cols=114 Identities=23% Similarity=0.236 Sum_probs=95.6
Q ss_pred CeeecCCCeeEEEeeCCCCcccCCccCCCCCCCCEEEccCCCCCCCCCCCccCCcccceeecccccCCCCCchhhhcCcc
Q 024203 65 GATCNNGRIYKLSLTNLSLQGSISPYLSNCTNLQSLDLSSNALTGSIPADLQYLVNLAVLNLSANRLAGEIPPQLTLCAY 144 (271)
Q Consensus 65 ~~~~~~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 144 (271)
..+..+++|++|+|++|.++ .++ .+..+++|+.|++++|.++ .+|..+..+++|++|++++|.++. + ..+..+++
T Consensus 42 ~sl~~L~~L~~L~Ls~n~I~-~i~-~l~~l~~L~~L~Ls~N~i~-~i~~~~~~~~~L~~L~l~~N~i~~-l-~~~~~l~~ 116 (198)
T d1m9la_ 42 ATLSTLKACKHLALSTNNIE-KIS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-L-SGIEKLVN 116 (198)
T ss_dssp HHHHHTTTCCEEECSEEEES-CCC-CHHHHTTCCEEECCEEEEC-SCSSHHHHHHHCCEEECSEEECCC-H-HHHHHHHH
T ss_pred hHHhcccccceeECcccCCC-Ccc-cccCCccccChhhcccccc-cccccccccccccccccccccccc-c-cccccccc
Confidence 45667899999999999998 555 5888999999999999998 667555566789999999999983 4 45888999
Q ss_pred CCeeeccCCcCCCCCc--hhccCCCCCCEEEccCCCCCCCCC
Q 024203 145 LNVIDLHDNLLTGQIP--QQLGLLVRLSAFDVSNNKLSGPIP 184 (271)
Q Consensus 145 L~~L~Ls~N~l~~~~p--~~~~~l~~L~~L~l~~N~l~g~ip 184 (271)
|+.|++++|+++ .++ ..+..+++|+.|++++|++....+
T Consensus 117 L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~L~~N~l~~~~~ 157 (198)
T d1m9la_ 117 LRVLYMSNNKIT-NWGEIDKLAALDKLEDLLLAGNPLYNDYK 157 (198)
T ss_dssp SSEEEESEEECC-CHHHHHHHTTTTTCSEEEECSSHHHHHHC
T ss_pred ccccccccchhc-cccccccccCCCccceeecCCCccccCcc
Confidence 999999999998 444 468899999999999998864433
No 19
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.32 E-value=5.3e-12 Score=100.90 Aligned_cols=127 Identities=28% Similarity=0.317 Sum_probs=101.0
Q ss_pred eecCCCeeEEEeeCCCCcccCCccCCCCCCCCEEEccCCCCCCCCCCCccCCcccceeecccccCCCCCchhhhcCccCC
Q 024203 67 TCNNGRIYKLSLTNLSLQGSISPYLSNCTNLQSLDLSSNALTGSIPADLQYLVNLAVLNLSANRLAGEIPPQLTLCAYLN 146 (271)
Q Consensus 67 ~~~~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 146 (271)
+..+++|++|++++|.+++ ++ .+..+++|++|++++|+++ .+| .+..+++|+.|++++|.+. .+ ..+.+++.++
T Consensus 64 l~~l~~L~~L~L~~n~i~~-l~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~~~~~-~~-~~l~~l~~l~ 137 (210)
T d1h6ta2 64 IQYLPNVTKLFLNGNKLTD-IK-PLANLKNLGWLFLDENKVK-DLS-SLKDLKKLKSLSLEHNGIS-DI-NGLVHLPQLE 137 (210)
T ss_dssp GGGCTTCCEEECCSSCCCC-CG-GGTTCTTCCEEECCSSCCC-CGG-GGTTCTTCCEEECTTSCCC-CC-GGGGGCTTCC
T ss_pred HhhCCCCCEEeCCCccccC-cc-ccccCcccccccccccccc-ccc-ccccccccccccccccccc-cc-cccccccccc
Confidence 4568899999999999985 44 3678999999999999998 455 5788899999999999887 33 4577888899
Q ss_pred eeeccCCcCCCCCchhccCCCCCCEEEccCCCCCCCCChhhhccCCCCCCccCCCCcCCCC
Q 024203 147 VIDLHDNLLTGQIPQQLGLLVRLSAFDVSNNKLSGPIPASLGNRSGNLPKFNASSFEGNKD 207 (271)
Q Consensus 147 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~~l~~l~~~~~~~N~~ 207 (271)
.+++++|.+++ . ..+..+++|+++++++|++++ ++. +.+ +++++.+++++|..
T Consensus 138 ~l~~~~n~l~~-~-~~~~~l~~L~~l~l~~n~l~~-i~~-l~~----l~~L~~L~Ls~N~i 190 (210)
T d1h6ta2 138 SLYLGNNKITD-I-TVLSRLTKLDTLSLEDNQISD-IVP-LAG----LTKLQNLYLSKNHI 190 (210)
T ss_dssp EEECCSSCCCC-C-GGGGGCTTCSEEECCSSCCCC-CGG-GTT----CTTCCEEECCSSCC
T ss_pred ccccccccccc-c-ccccccccccccccccccccc-ccc-ccC----CCCCCEEECCCCCC
Confidence 99999998884 3 346778899999999999884 443 444 77888888888864
No 20
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.31 E-value=5.6e-12 Score=100.73 Aligned_cols=123 Identities=25% Similarity=0.330 Sum_probs=102.0
Q ss_pred eecCCCeeEEEeeCCCCcccCCccCCCCCCCCEEEccCCCCCCCCCCCccCCcccceeecccccCCCCCchhhhcCccCC
Q 024203 67 TCNNGRIYKLSLTNLSLQGSISPYLSNCTNLQSLDLSSNALTGSIPADLQYLVNLAVLNLSANRLAGEIPPQLTLCAYLN 146 (271)
Q Consensus 67 ~~~~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 146 (271)
++.+++|++|++++|.+++ +| .+..+++|+.|++++|.+. .+ ..+..++.++.+++++|.+++ +..+..+++|+
T Consensus 86 ~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~l~~~~~~-~~-~~l~~l~~l~~l~~~~n~l~~--~~~~~~l~~L~ 159 (210)
T d1h6ta2 86 LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGIS-DI-NGLVHLPQLESLYLGNNKITD--ITVLSRLTKLD 159 (210)
T ss_dssp GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCC-CC-GGGGGCTTCCEEECCSSCCCC--CGGGGGCTTCS
T ss_pred cccCccccccccccccccc-cc-ccccccccccccccccccc-cc-ccccccccccccccccccccc--ccccccccccc
Confidence 4568899999999999984 55 5888999999999999987 33 468889999999999999984 34577899999
Q ss_pred eeeccCCcCCCCCchhccCCCCCCEEEccCCCCCCCCChhhhccCCCCCCccCCCCc
Q 024203 147 VIDLHDNLLTGQIPQQLGLLVRLSAFDVSNNKLSGPIPASLGNRSGNLPKFNASSFE 203 (271)
Q Consensus 147 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~~l~~l~~~~~~ 203 (271)
++++++|++++ ++. +.++++|+.|++++|+++ .+| .+.+ +++|+.+++.
T Consensus 160 ~l~l~~n~l~~-i~~-l~~l~~L~~L~Ls~N~i~-~l~-~l~~----l~~L~~L~Ls 208 (210)
T d1h6ta2 160 TLSLEDNQISD-IVP-LAGLTKLQNLYLSKNHIS-DLR-ALAG----LKNLDVLELF 208 (210)
T ss_dssp EEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCC-BCG-GGTT----CTTCSEEEEE
T ss_pred ccccccccccc-ccc-ccCCCCCCEEECCCCCCC-CCh-hhcC----CCCCCEEEcc
Confidence 99999999994 543 889999999999999998 565 3554 6777777654
No 21
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.31 E-value=1.3e-11 Score=97.75 Aligned_cols=113 Identities=31% Similarity=0.416 Sum_probs=94.9
Q ss_pred eecCCCeeEEEeeCCCCcccCCccCCCCCCCCEEEccCCCCCCCCCCCccCCcccceeecccccCCCCCchhhhcCccCC
Q 024203 67 TCNNGRIYKLSLTNLSLQGSISPYLSNCTNLQSLDLSSNALTGSIPADLQYLVNLAVLNLSANRLAGEIPPQLTLCAYLN 146 (271)
Q Consensus 67 ~~~~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 146 (271)
++++++|++|++++|.+. .++ .+..+++|+.|++++|.+... ..+..+++|+.|++++|++. .++ .+..+++|+
T Consensus 80 l~~l~~L~~L~l~~n~~~-~~~-~l~~l~~L~~L~l~~~~~~~~--~~~~~l~~L~~L~l~~n~l~-~~~-~l~~~~~L~ 153 (199)
T d2omxa2 80 LKNLTKLVDILMNNNQIA-DIT-PLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTIS-DIS-ALSGLTSLQ 153 (199)
T ss_dssp GTTCTTCCEEECCSSCCC-CCG-GGTTCTTCSEEECCSSCCCCC--GGGTTCTTCSEEECCSSCCC-CCG-GGTTCTTCS
T ss_pred ccCCcccccccccccccc-ccc-ccccccccccccccccccccc--cccchhhhhHHhhhhhhhhc-ccc-ccccccccc
Confidence 677899999999999987 444 488999999999999998743 35788999999999999997 444 588899999
Q ss_pred eeeccCCcCCCCCchhccCCCCCCEEEccCCCCCCCCChhhhc
Q 024203 147 VIDLHDNLLTGQIPQQLGLLVRLSAFDVSNNKLSGPIPASLGN 189 (271)
Q Consensus 147 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~ 189 (271)
.|++++|++++ ++ .+.++++|++|++++|++++ +| .+..
T Consensus 154 ~L~l~~n~l~~-l~-~l~~l~~L~~L~ls~N~i~~-i~-~l~~ 192 (199)
T d2omxa2 154 QLNFSSNQVTD-LK-PLANLTTLERLDISSNKVSD-IS-VLAK 192 (199)
T ss_dssp EEECCSSCCCC-CG-GGTTCTTCCEEECCSSCCCC-CG-GGGG
T ss_pred ccccccccccC-Cc-cccCCCCCCEEECCCCCCCC-Cc-cccC
Confidence 99999999994 44 38899999999999999984 54 3444
No 22
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.28 E-value=6.4e-12 Score=108.45 Aligned_cols=126 Identities=27% Similarity=0.301 Sum_probs=75.2
Q ss_pred eecCCCeeEEEeeCCCCcccCCccCCCCCCCCEEEccCCCCCCCCCCCccCCcccceeecccccCCCCCchhhhcCccCC
Q 024203 67 TCNNGRIYKLSLTNLSLQGSISPYLSNCTNLQSLDLSSNALTGSIPADLQYLVNLAVLNLSANRLAGEIPPQLTLCAYLN 146 (271)
Q Consensus 67 ~~~~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 146 (271)
+..+++++.|++++|.+++.. .+..+++|++|++++|++++. + .+..++.++.++++.|.+++ + ..+..+++++
T Consensus 237 l~~l~~L~~L~l~~n~l~~~~--~~~~~~~L~~L~l~~~~l~~~-~-~~~~~~~l~~l~~~~n~l~~-~-~~~~~~~~l~ 310 (384)
T d2omza2 237 LASLTNLTDLDLANNQISNLA--PLSGLTKLTELKLGANQISNI-S-PLAGLTALTNLELNENQLED-I-SPISNLKNLT 310 (384)
T ss_dssp GGGCTTCSEEECCSSCCCCCG--GGTTCTTCSEEECCSSCCCCC-G-GGTTCTTCSEEECCSSCCSC-C-GGGGGCTTCS
T ss_pred hhcccccchhccccCccCCCC--cccccccCCEeeccCcccCCC-C-cccccccccccccccccccc-c-cccchhcccC
Confidence 445778899999999888533 367788889999988888743 2 24455555666666665553 2 2344555555
Q ss_pred eeeccCCcCCCCCchhccCCCCCCEEEccCCCCCCCCChhhhccCCCCCCccCCCCcCCC
Q 024203 147 VIDLHDNLLTGQIPQQLGLLVRLSAFDVSNNKLSGPIPASLGNRSGNLPKFNASSFEGNK 206 (271)
Q Consensus 147 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~~l~~l~~~~~~~N~ 206 (271)
.|++++|++++. + .+..+++|++|++++|++++ +| .+.+ +++|+.+++++|+
T Consensus 311 ~L~ls~n~l~~l-~-~l~~l~~L~~L~L~~n~l~~-l~-~l~~----l~~L~~L~l~~N~ 362 (384)
T d2omza2 311 YLTLYFNNISDI-S-PVSSLTKLQRLFFANNKVSD-VS-SLAN----LTNINWLSAGHNQ 362 (384)
T ss_dssp EEECCSSCCSCC-G-GGGGCTTCCEEECCSSCCCC-CG-GGGG----CTTCCEEECCSSC
T ss_pred eEECCCCCCCCC-c-ccccCCCCCEEECCCCCCCC-Ch-hHcC----CCCCCEEECCCCc
Confidence 556655555532 2 14555555566665555552 33 3333 4555555555554
No 23
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.23 E-value=6.3e-14 Score=111.47 Aligned_cols=112 Identities=25% Similarity=0.310 Sum_probs=93.6
Q ss_pred cCCccCCCCCCCCEEEccCCCCCCCCCCCccCCcccceeecccccCCCCCchhhhcCccCCeeeccCCcCCCCCchhccC
Q 024203 86 SISPYLSNCTNLQSLDLSSNALTGSIPADLQYLVNLAVLNLSANRLAGEIPPQLTLCAYLNVIDLHDNLLTGQIPQQLGL 165 (271)
Q Consensus 86 ~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 165 (271)
.++..+..+++|++|+|++|.++ .++ .+..+++|+.|++++|.++ .+|..+..+++|+.|++++|+++ .++ .+..
T Consensus 39 ~l~~sl~~L~~L~~L~Ls~n~I~-~i~-~l~~l~~L~~L~Ls~N~i~-~i~~~~~~~~~L~~L~l~~N~i~-~l~-~~~~ 113 (198)
T d1m9la_ 39 KMDATLSTLKACKHLALSTNNIE-KIS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIA-SLS-GIEK 113 (198)
T ss_dssp CCHHHHHHTTTCCEEECSEEEES-CCC-CHHHHTTCCEEECCEEEEC-SCSSHHHHHHHCCEEECSEEECC-CHH-HHHH
T ss_pred hhhhHHhcccccceeECcccCCC-Ccc-cccCCccccChhhcccccc-ccccccccccccccccccccccc-ccc-cccc
Confidence 45667888999999999999998 555 6889999999999999998 67776667788999999999999 444 4778
Q ss_pred CCCCCEEEccCCCCCCCCC--hhhhccCCCCCCccCCCCcCCCC
Q 024203 166 LVRLSAFDVSNNKLSGPIP--ASLGNRSGNLPKFNASSFEGNKD 207 (271)
Q Consensus 166 l~~L~~L~l~~N~l~g~ip--~~~~~~~~~l~~l~~~~~~~N~~ 207 (271)
+++|++|++++|+++. ++ ..+.. +++++.+++++|+.
T Consensus 114 l~~L~~L~L~~N~i~~-~~~~~~l~~----l~~L~~L~L~~N~l 152 (198)
T d1m9la_ 114 LVNLRVLYMSNNKITN-WGEIDKLAA----LDKLEDLLLAGNPL 152 (198)
T ss_dssp HHHSSEEEESEEECCC-HHHHHHHTT----TTTCSEEEECSSHH
T ss_pred cccccccccccchhcc-ccccccccC----CCccceeecCCCcc
Confidence 8999999999999984 43 23444 88899999999973
No 24
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.19 E-value=8.4e-11 Score=94.66 Aligned_cols=129 Identities=21% Similarity=0.338 Sum_probs=95.3
Q ss_pred eecCCCeeEEEeeCCCCcccCCccCCCCCCCCEEEccCCCCCCCCCCCccCCcccceeecccccCCCCCc----------
Q 024203 67 TCNNGRIYKLSLTNLSLQGSISPYLSNCTNLQSLDLSSNALTGSIPADLQYLVNLAVLNLSANRLAGEIP---------- 136 (271)
Q Consensus 67 ~~~~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p---------- 136 (271)
+..+++|++|++++|.+.+.. .+..+++++.+++++|.++ .++ .+..+++|+.++++++...+..+
T Consensus 59 l~~l~~L~~L~ls~n~i~~~~--~l~~l~~l~~l~~~~n~~~-~i~-~l~~l~~L~~l~l~~~~~~~~~~~~~~~~~~~l 134 (227)
T d1h6ua2 59 VQYLNNLIGLELKDNQITDLA--PLKNLTKITELELSGNPLK-NVS-AIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVL 134 (227)
T ss_dssp GGGCTTCCEEECCSSCCCCCG--GGTTCCSCCEEECCSCCCS-CCG-GGTTCTTCCEEECTTSCCCCCGGGTTCTTCCEE
T ss_pred HhcCCCCcEeecCCceeeccc--ccccccccccccccccccc-ccc-cccccccccccccccccccccchhccccchhhh
Confidence 567889999999999888533 2788888888888888877 443 46677888888887777653211
Q ss_pred ----------hhhhcCccCCeeeccCCcCCCCCchhccCCCCCCEEEccCCCCCCCCChhhhccCCCCCCccCCCCcCCC
Q 024203 137 ----------PQLTLCAYLNVIDLHDNLLTGQIPQQLGLLVRLSAFDVSNNKLSGPIPASLGNRSGNLPKFNASSFEGNK 206 (271)
Q Consensus 137 ----------~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~~l~~l~~~~~~~N~ 206 (271)
..+..+++|++|++++|.+++. + .+.++++|+.|++++|++++ +|. +.+ +++++.+++++|+
T Consensus 135 ~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~-~-~l~~l~~L~~L~Ls~n~l~~-l~~-l~~----l~~L~~L~Ls~N~ 206 (227)
T d1h6ua2 135 YLDLNQITNISPLAGLTNLQYLSIGNAQVSDL-T-PLANLSKLTTLKADDNKISD-ISP-LAS----LPNLIEVHLKNNQ 206 (227)
T ss_dssp ECCSSCCCCCGGGGGCTTCCEEECCSSCCCCC-G-GGTTCTTCCEEECCSSCCCC-CGG-GGG----CTTCCEEECTTSC
T ss_pred hchhhhhchhhhhccccccccccccccccccc-h-hhcccccceecccCCCccCC-Chh-hcC----CCCCCEEECcCCc
Confidence 2345567788888888888743 3 37888999999999999884 443 554 7788888888886
Q ss_pred C
Q 024203 207 D 207 (271)
Q Consensus 207 ~ 207 (271)
.
T Consensus 207 l 207 (227)
T d1h6ua2 207 I 207 (227)
T ss_dssp C
T ss_pred C
Confidence 3
No 25
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.14 E-value=1.3e-10 Score=100.08 Aligned_cols=123 Identities=23% Similarity=0.336 Sum_probs=64.9
Q ss_pred cCCCeeEEEeeCCCCcccCCccCCCCCCCCEEEccCCCCCCCCCCCccCCcccceeecccccCCCCCchhhhcCccCCee
Q 024203 69 NNGRIYKLSLTNLSLQGSISPYLSNCTNLQSLDLSSNALTGSIPADLQYLVNLAVLNLSANRLAGEIPPQLTLCAYLNVI 148 (271)
Q Consensus 69 ~~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 148 (271)
.++++++|+++++.+.+ ++ .+..++.++.++++.|.+++ + ..+..+++++.|++++|++++. + .+..+++|+.|
T Consensus 261 ~~~~L~~L~l~~~~l~~-~~-~~~~~~~l~~l~~~~n~l~~-~-~~~~~~~~l~~L~ls~n~l~~l-~-~l~~l~~L~~L 334 (384)
T d2omza2 261 GLTKLTELKLGANQISN-IS-PLAGLTALTNLELNENQLED-I-SPISNLKNLTYLTLYFNNISDI-S-PVSSLTKLQRL 334 (384)
T ss_dssp TCTTCSEEECCSSCCCC-CG-GGTTCTTCSEEECCSSCCSC-C-GGGGGCTTCSEEECCSSCCSCC-G-GGGGCTTCCEE
T ss_pred ccccCCEeeccCcccCC-CC-cccccccccccccccccccc-c-cccchhcccCeEECCCCCCCCC-c-ccccCCCCCEE
Confidence 34555666666665553 22 24455556666666665552 1 2345555666666666666532 2 25555666666
Q ss_pred eccCCcCCCCCchhccCCCCCCEEEccCCCCCCCCChhhhccCCCCCCccCCCCcCC
Q 024203 149 DLHDNLLTGQIPQQLGLLVRLSAFDVSNNKLSGPIPASLGNRSGNLPKFNASSFEGN 205 (271)
Q Consensus 149 ~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~~l~~l~~~~~~~N 205 (271)
++++|+++ .+| .+..+++|++|++++|++++..| +.+ +++++.+++++|
T Consensus 335 ~L~~n~l~-~l~-~l~~l~~L~~L~l~~N~l~~l~~--l~~----l~~L~~L~L~~N 383 (384)
T d2omza2 335 FFANNKVS-DVS-SLANLTNINWLSAGHNQISDLTP--LAN----LTRITQLGLNDQ 383 (384)
T ss_dssp ECCSSCCC-CCG-GGGGCTTCCEEECCSSCCCBCGG--GTT----CTTCSEEECCCE
T ss_pred ECCCCCCC-CCh-hHcCCCCCCEEECCCCcCCCChh--hcc----CCCCCEeeCCCC
Confidence 66666655 333 35556666666666666654322 332 445555555544
No 26
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.04 E-value=4.7e-10 Score=90.15 Aligned_cols=125 Identities=23% Similarity=0.332 Sum_probs=91.4
Q ss_pred eecCCCeeEEEeeCCCCcccCCccCCCCCCCCEEEccCCCCCCCC--------------------CCCccCCcccceeec
Q 024203 67 TCNNGRIYKLSLTNLSLQGSISPYLSNCTNLQSLDLSSNALTGSI--------------------PADLQYLVNLAVLNL 126 (271)
Q Consensus 67 ~~~~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~--------------------p~~~~~l~~L~~L~L 126 (271)
+..+.+++++++++|.++ .++ .+..+++|+.++++++...+.. ...+..+++|+.|++
T Consensus 81 l~~l~~l~~l~~~~n~~~-~i~-~l~~l~~L~~l~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~L~l 158 (227)
T d1h6ua2 81 LKNLTKITELELSGNPLK-NVS-AIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSI 158 (227)
T ss_dssp GTTCCSCCEEECCSCCCS-CCG-GGTTCTTCCEEECTTSCCCCCGGGTTCTTCCEEECCSSCCCCCGGGGGCTTCCEEEC
T ss_pred cccccccccccccccccc-ccc-cccccccccccccccccccccchhccccchhhhhchhhhhchhhhhccccccccccc
Confidence 455677788888887776 333 4566777777777776655321 123456788999999
Q ss_pred ccccCCCCCchhhhcCccCCeeeccCCcCCCCCchhccCCCCCCEEEccCCCCCCCCChhhhccCCCCCCccCCCCc
Q 024203 127 SANRLAGEIPPQLTLCAYLNVIDLHDNLLTGQIPQQLGLLVRLSAFDVSNNKLSGPIPASLGNRSGNLPKFNASSFE 203 (271)
Q Consensus 127 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~~l~~l~~~~~~ 203 (271)
++|.++.. ..+.++++|+.|++++|+++ .+|. +..+++|++|++++|++++ +|. +.+ +++|..++++
T Consensus 159 ~~n~~~~~--~~l~~l~~L~~L~Ls~n~l~-~l~~-l~~l~~L~~L~Ls~N~lt~-i~~-l~~----l~~L~~L~ls 225 (227)
T d1h6ua2 159 GNAQVSDL--TPLANLSKLTTLKADDNKIS-DISP-LASLPNLIEVHLKNNQISD-VSP-LAN----TSNLFIVTLT 225 (227)
T ss_dssp CSSCCCCC--GGGTTCTTCCEEECCSSCCC-CCGG-GGGCTTCCEEECTTSCCCB-CGG-GTT----CTTCCEEEEE
T ss_pred cccccccc--hhhcccccceecccCCCccC-CChh-hcCCCCCCEEECcCCcCCC-Ccc-ccc----CCCCCEEEee
Confidence 99998743 34889999999999999998 4554 7899999999999999984 543 444 6677766654
No 27
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.96 E-value=1.9e-09 Score=87.03 Aligned_cols=132 Identities=19% Similarity=0.134 Sum_probs=68.9
Q ss_pred eeecCCCeeEEEeeC-CCCcccCCccCCCCCCCCEEEccCCCCCC-------------------------CCCCCccCC-
Q 024203 66 ATCNNGRIYKLSLTN-LSLQGSISPYLSNCTNLQSLDLSSNALTG-------------------------SIPADLQYL- 118 (271)
Q Consensus 66 ~~~~~~~l~~L~L~~-n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~-------------------------~~p~~~~~l- 118 (271)
.+..+.+++++.+.. |.+....+..+.++++|+++++++|.+.. ..+..+..+
T Consensus 73 ~f~~l~~l~~l~~~~~n~l~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~~~~~l~~l~~~~~~n~~l~~i~~~~~~~~~ 152 (242)
T d1xwdc1 73 VFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLS 152 (242)
T ss_dssp SEESCTTCCEEEEECCTTCCEECTTSEECCTTCCEEEEESCCCCSCCCCTTTCBSSCEEEEEESCTTCCEECTTSSTTSB
T ss_pred ccccccccccccccccccccccccccccccccccccccchhhhccccccccccccccccccccccccccccccccccccc
Confidence 344455555555432 34443444445555555555555555542 222233333
Q ss_pred cccceeecccccCCCCCchhhhcCccCCee-eccCCcCCCCCchhccCCCCCCEEEccCCCCCCCCCh-hhhccCCCCCC
Q 024203 119 VNLAVLNLSANRLAGEIPPQLTLCAYLNVI-DLHDNLLTGQIPQQLGLLVRLSAFDVSNNKLSGPIPA-SLGNRSGNLPK 196 (271)
Q Consensus 119 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L-~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~ip~-~~~~~~~~l~~ 196 (271)
..++.|++++|+++. ++.......+++.+ ++++|+++...+..|.++++|++|++++|+++ .+|. .+.+ ++.
T Consensus 153 ~~l~~L~l~~n~l~~-i~~~~~~~~~l~~~~~l~~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~-~l~~~~~~~----l~~ 226 (242)
T d1xwdc1 153 FESVILWLNKNGIQE-IHNCAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIH-SLPSYGLEN----LKK 226 (242)
T ss_dssp SSCEEEECCSSCCCE-ECTTTTTTCCEEEEECTTCTTCCCCCTTTTTTSCCCSEEECTTSCCC-CCCSSSCTT----CCE
T ss_pred ccceeeecccccccc-cccccccchhhhccccccccccccccHHHhcCCCCCCEEECCCCcCC-ccCHHHHcC----Ccc
Confidence 256666777777763 33333333444443 45666777333345677788888888888887 4443 2333 555
Q ss_pred ccCCCCc
Q 024203 197 FNASSFE 203 (271)
Q Consensus 197 l~~~~~~ 203 (271)
++.+++.
T Consensus 227 L~~l~~~ 233 (242)
T d1xwdc1 227 LRARSTY 233 (242)
T ss_dssp EESSSEE
T ss_pred cccCcCC
Confidence 5555443
No 28
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.93 E-value=1.6e-09 Score=87.61 Aligned_cols=109 Identities=14% Similarity=0.102 Sum_probs=60.7
Q ss_pred CeeEEEeeCCCCcccCCccCCCCCCCCEEEccCCCCCCCCC-CCccCCcccceeeccc-ccCCCCCchhhhcCccCCeee
Q 024203 72 RIYKLSLTNLSLQGSISPYLSNCTNLQSLDLSSNALTGSIP-ADLQYLVNLAVLNLSA-NRLAGEIPPQLTLCAYLNVID 149 (271)
Q Consensus 72 ~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~ 149 (271)
++++|++++|.++...+..|.++++|++|++++|.+...++ ..|..++.++++++.. |.+....+..+.++++|+.++
T Consensus 30 ~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~n~l~~~~~~~~~~l~~L~~l~ 109 (242)
T d1xwdc1 30 NAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLL 109 (242)
T ss_dssp CCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECCTTCCEECTTSEECCTTCCEEE
T ss_pred CCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeeccccccccccccccccccccccccccccccccccccccc
Confidence 46666777666663333356666667777776666654332 3455666666666543 455545555566666677777
Q ss_pred ccCCcCCCCCc-hhccCCCCCCEEEccCCCCC
Q 024203 150 LHDNLLTGQIP-QQLGLLVRLSAFDVSNNKLS 180 (271)
Q Consensus 150 Ls~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~ 180 (271)
+++|++....+ ..+..+..+..+..+++.+.
T Consensus 110 l~~~~l~~~~~~~~~~~l~~l~~~~~~n~~l~ 141 (242)
T d1xwdc1 110 ISNTGIKHLPDVHKIHSLQKVLLDIQDNINIH 141 (242)
T ss_dssp EESCCCCSCCCCTTTCBSSCEEEEEESCTTCC
T ss_pred cchhhhcccccccccccccccccccccccccc
Confidence 76666653222 12233344444444555554
No 29
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=98.86 E-value=1e-08 Score=86.52 Aligned_cols=96 Identities=30% Similarity=0.377 Sum_probs=68.2
Q ss_pred CCeeEEEeeCCCCcccCCccCCCCCCCCEEEccCCCCCCCCCCCccCCcccceeecccccCCCCCchhhhcCccCCeeec
Q 024203 71 GRIYKLSLTNLSLQGSISPYLSNCTNLQSLDLSSNALTGSIPADLQYLVNLAVLNLSANRLAGEIPPQLTLCAYLNVIDL 150 (271)
Q Consensus 71 ~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 150 (271)
.+++.|+|++++++ .+|+. .++|++|++++|+++ .+|+.+ .+|+.|++++|+++ .++.. .+.|++|++
T Consensus 38 ~~l~~LdLs~~~L~-~lp~~---~~~L~~L~Ls~N~l~-~lp~~~---~~L~~L~l~~n~l~-~l~~l---p~~L~~L~L 105 (353)
T d1jl5a_ 38 RQAHELELNNLGLS-SLPEL---PPHLESLVASCNSLT-ELPELP---QSLKSLLVDNNNLK-ALSDL---PPLLEYLGV 105 (353)
T ss_dssp HTCSEEECTTSCCS-CCCSC---CTTCSEEECCSSCCS-SCCCCC---TTCCEEECCSSCCS-CCCSC---CTTCCEEEC
T ss_pred cCCCEEEeCCCCCC-CCCCC---CCCCCEEECCCCCCc-ccccch---hhhhhhhhhhcccc-hhhhh---ccccccccc
Confidence 35677888888887 56653 467788888888887 667543 46777888888776 44421 135788888
Q ss_pred cCCcCCCCCchhccCCCCCCEEEccCCCCC
Q 024203 151 HDNLLTGQIPQQLGLLVRLSAFDVSNNKLS 180 (271)
Q Consensus 151 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 180 (271)
++|.++ .+|. ++.+++|++|++++|.+.
T Consensus 106 ~~n~l~-~lp~-~~~l~~L~~L~l~~~~~~ 133 (353)
T d1jl5a_ 106 SNNQLE-KLPE-LQNSSFLKIIDVDNNSLK 133 (353)
T ss_dssp CSSCCS-SCCC-CTTCTTCCEEECCSSCCS
T ss_pred cccccc-cccc-hhhhccceeecccccccc
Confidence 888887 5664 567788888888888776
No 30
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.57 E-value=6.1e-09 Score=86.51 Aligned_cols=133 Identities=20% Similarity=0.198 Sum_probs=63.8
Q ss_pred cCCCeeEEEeeCCCCcccCCccCCCCCCCCEEEccCC-CCCCC-CCCCccCCcccceeecccc-cCCCC-Cchhhhc-Cc
Q 024203 69 NNGRIYKLSLTNLSLQGSISPYLSNCTNLQSLDLSSN-ALTGS-IPADLQYLVNLAVLNLSAN-RLAGE-IPPQLTL-CA 143 (271)
Q Consensus 69 ~~~~l~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N-~l~~~-~p~~~~~l~~L~~L~Ls~N-~l~~~-~p~~~~~-l~ 143 (271)
.+++|++|+++++.+.+..+..+..+++|++|+++++ .++.. +..-...+++|++|+++++ .++.. +...+.. .+
T Consensus 69 ~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L~~L~ls~c~~~~~~~~~~~~~~~~~ 148 (284)
T d2astb2 69 QCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSE 148 (284)
T ss_dssp TBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCT
T ss_pred hCCCcccccccccCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHhccccccccccccccccchhhhccccc
Confidence 4566777777777666555555666677777777664 34311 1111234566666666664 23210 1111111 23
Q ss_pred cCCeeeccCC--cCCCC-CchhccCCCCCCEEEccCC-CCCCCCChhhhccCCCCCCccCCCCcCC
Q 024203 144 YLNVIDLHDN--LLTGQ-IPQQLGLLVRLSAFDVSNN-KLSGPIPASLGNRSGNLPKFNASSFEGN 205 (271)
Q Consensus 144 ~L~~L~Ls~N--~l~~~-~p~~~~~l~~L~~L~l~~N-~l~g~ip~~~~~~~~~l~~l~~~~~~~N 205 (271)
.|+.|+++++ .++.. +.....++++|++|++++| .+++.....+.+ +++++.++++++
T Consensus 149 ~L~~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~L~~~~~itd~~~~~l~~----~~~L~~L~L~~C 210 (284)
T d2astb2 149 TITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQ----LNYLQHLSLSRC 210 (284)
T ss_dssp TCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGG----CTTCCEEECTTC
T ss_pred ccchhhhcccccccccccccccccccccccccccccccCCCchhhhhhcc----cCcCCEEECCCC
Confidence 4444444432 12211 1122234566666666654 344444444443 455555555553
No 31
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=98.55 E-value=1.9e-07 Score=78.44 Aligned_cols=95 Identities=26% Similarity=0.318 Sum_probs=74.0
Q ss_pred CCCCEEEccCCCCCCCCCCCccCCcccceeecccccCCCCCchhhhcCccCCeeeccCCcCCCCCchhccCCCCCCEEEc
Q 024203 95 TNLQSLDLSSNALTGSIPADLQYLVNLAVLNLSANRLAGEIPPQLTLCAYLNVIDLHDNLLTGQIPQQLGLLVRLSAFDV 174 (271)
Q Consensus 95 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 174 (271)
.++++|||++|.++ .+|+. +++|++|++++|+++ .+|..+ .+|+.|++++|+++ .++.. .+.|++|++
T Consensus 38 ~~l~~LdLs~~~L~-~lp~~---~~~L~~L~Ls~N~l~-~lp~~~---~~L~~L~l~~n~l~-~l~~l---p~~L~~L~L 105 (353)
T d1jl5a_ 38 RQAHELELNNLGLS-SLPEL---PPHLESLVASCNSLT-ELPELP---QSLKSLLVDNNNLK-ALSDL---PPLLEYLGV 105 (353)
T ss_dssp HTCSEEECTTSCCS-CCCSC---CTTCSEEECCSSCCS-SCCCCC---TTCCEEECCSSCCS-CCCSC---CTTCCEEEC
T ss_pred cCCCEEEeCCCCCC-CCCCC---CCCCCEEECCCCCCc-ccccch---hhhhhhhhhhcccc-hhhhh---ccccccccc
Confidence 46889999999998 78864 478999999999999 788654 57899999999998 55532 246999999
Q ss_pred cCCCCCCCCChhhhccCCCCCCccCCCCcCCCC
Q 024203 175 SNNKLSGPIPASLGNRSGNLPKFNASSFEGNKD 207 (271)
Q Consensus 175 ~~N~l~g~ip~~~~~~~~~l~~l~~~~~~~N~~ 207 (271)
++|.+. .+|. ++. ++.++.+++.+|..
T Consensus 106 ~~n~l~-~lp~-~~~----l~~L~~L~l~~~~~ 132 (353)
T d1jl5a_ 106 SNNQLE-KLPE-LQN----SSFLKIIDVDNNSL 132 (353)
T ss_dssp CSSCCS-SCCC-CTT----CTTCCEEECCSSCC
T ss_pred cccccc-cccc-hhh----hccceeeccccccc
Confidence 999998 6664 333 56667777766653
No 32
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.46 E-value=5.1e-09 Score=91.39 Aligned_cols=110 Identities=25% Similarity=0.260 Sum_probs=80.0
Q ss_pred CeeEEEeeCCCCccc-CCccCCCCCCCCEEEccCCCCCC----CCCCCccCCcccceeecccccCCCCCchhhh-----c
Q 024203 72 RIYKLSLTNLSLQGS-ISPYLSNCTNLQSLDLSSNALTG----SIPADLQYLVNLAVLNLSANRLAGEIPPQLT-----L 141 (271)
Q Consensus 72 ~l~~L~L~~n~l~~~-~p~~l~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-----~ 141 (271)
+|+.|++++|++++. +..-+..++++++|+|++|.++. .+...+..+++|++|||++|.++..--..+. .
T Consensus 3 ~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~~ 82 (460)
T d1z7xw1 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTP 82 (460)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCST
T ss_pred CCCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhcC
Confidence 588999999998752 12334557889999999998872 2334466788999999999988621111221 1
Q ss_pred CccCCeeeccCCcCCCC----CchhccCCCCCCEEEccCCCCCC
Q 024203 142 CAYLNVIDLHDNLLTGQ----IPQQLGLLVRLSAFDVSNNKLSG 181 (271)
Q Consensus 142 l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~g 181 (271)
..+|++|++++|++++. ++..+..+++|++|++++|.+..
T Consensus 83 ~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~i~~ 126 (460)
T d1z7xw1 83 SCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGD 126 (460)
T ss_dssp TCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHH
T ss_pred CCCCCEEECCCCCccccccccccchhhccccccccccccccchh
Confidence 24799999999998753 45667788999999999998763
No 33
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.45 E-value=9.8e-09 Score=85.25 Aligned_cols=137 Identities=22% Similarity=0.281 Sum_probs=95.2
Q ss_pred CCCeeEEEeeCCCCccc-CCccCCCCCCCCEEEccCCCCCCCCCCCccCCcccceeecccc-cCCCC-CchhhhcCccCC
Q 024203 70 NGRIYKLSLTNLSLQGS-ISPYLSNCTNLQSLDLSSNALTGSIPADLQYLVNLAVLNLSAN-RLAGE-IPPQLTLCAYLN 146 (271)
Q Consensus 70 ~~~l~~L~L~~n~l~~~-~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N-~l~~~-~p~~~~~l~~L~ 146 (271)
..++++|+++++.+... +...+..+++|++|+++++.+++..+..+..+++|++|+++++ .++.. +..-..++++|+
T Consensus 45 ~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L~ 124 (284)
T d2astb2 45 PFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLD 124 (284)
T ss_dssp CBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCC
T ss_pred CCCCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHhcc
Confidence 35789999999987643 3455678899999999999988777777888999999999995 55521 222345789999
Q ss_pred eeeccCC-cCCCC-Cchhcc-CCCCCCEEEccCC--CCCCCCChhhhccCCCCCCccCCCCcCCCCCC
Q 024203 147 VIDLHDN-LLTGQ-IPQQLG-LLVRLSAFDVSNN--KLSGPIPASLGNRSGNLPKFNASSFEGNKDLY 209 (271)
Q Consensus 147 ~L~Ls~N-~l~~~-~p~~~~-~l~~L~~L~l~~N--~l~g~ip~~~~~~~~~l~~l~~~~~~~N~~~c 209 (271)
+|+++++ .++.. ++..+. ..++|+.|+++++ .++.. .+.......++++.+++++++...
T Consensus 125 ~L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~~~---~l~~l~~~~~~L~~L~L~~~~~it 189 (284)
T d2astb2 125 ELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKS---DLSTLVRRCPNLVHLDLSDSVMLK 189 (284)
T ss_dssp EEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHH---HHHHHHHHCTTCSEEECTTCTTCC
T ss_pred ccccccccccccccchhhhcccccccchhhhcccccccccc---cccccccccccccccccccccCCC
Confidence 9999986 45422 222233 3478999999975 34322 222212236778888888776543
No 34
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.40 E-value=4.8e-09 Score=79.89 Aligned_cols=66 Identities=24% Similarity=0.248 Sum_probs=32.4
Q ss_pred CCcccceeecccccCCCC--CchhhhcCccCCeeeccCCcCCCCCchhccCCCCCCEEEccCCCCCCC
Q 024203 117 YLVNLAVLNLSANRLAGE--IPPQLTLCAYLNVIDLHDNLLTGQIPQQLGLLVRLSAFDVSNNKLSGP 182 (271)
Q Consensus 117 ~l~~L~~L~Ls~N~l~~~--~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~ 182 (271)
.+++|++|++++|+++.. ++..+..+++|+.|++++|.++..-+-.+.....|+.+++++|+++..
T Consensus 63 ~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~~~ 130 (162)
T d1koha1 63 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDT 130 (162)
T ss_dssp HCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCCTTSTTSSS
T ss_pred hCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccccchhhhhhhccccceeecCCCCcCcC
Confidence 345555555555555532 123344555566666666665522111222333556666666666543
No 35
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=98.38 E-value=8.7e-09 Score=87.63 Aligned_cols=116 Identities=18% Similarity=0.254 Sum_probs=64.2
Q ss_pred CCCCCCCEEEccCCCCCCC-----CCCCccCCcccceeecccccCCCC----CchhhhcCccCCeeeccCCcCCCCCc--
Q 024203 92 SNCTNLQSLDLSSNALTGS-----IPADLQYLVNLAVLNLSANRLAGE----IPPQLTLCAYLNVIDLHDNLLTGQIP-- 160 (271)
Q Consensus 92 ~~l~~L~~L~Ls~N~l~~~-----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p-- 160 (271)
...+.|+.|++++|.++.. +...+...++|+.|++++|.++.. +...+..+++|++|++++|.+++.-.
T Consensus 183 ~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~~L~Ls~n~i~~~g~~~ 262 (344)
T d2ca6a1 183 QSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAA 262 (344)
T ss_dssp HHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHH
T ss_pred hhhhhhcccccccccccccccccchhhhhcchhhhcccccccccccccccccccccccccccchhhhhhcCccCchhhHH
Confidence 3456677777777776521 223455567777777777776422 22344566777777777777764311
Q ss_pred --hhcc--CCCCCCEEEccCCCCCCCCChhhhccC-CCCCCccCCCCcCCCC
Q 024203 161 --QQLG--LLVRLSAFDVSNNKLSGPIPASLGNRS-GNLPKFNASSFEGNKD 207 (271)
Q Consensus 161 --~~~~--~l~~L~~L~l~~N~l~g~ip~~~~~~~-~~l~~l~~~~~~~N~~ 207 (271)
..+. ....|++|++++|+++..--..+.... ...+.++.+++++|.+
T Consensus 263 l~~~l~~~~~~~L~~L~ls~N~i~~~~~~~l~~~l~~~~~~L~~L~l~~N~~ 314 (344)
T d2ca6a1 263 VVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRF 314 (344)
T ss_dssp HHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBS
T ss_pred HHHHhhhccCCCCCEEECCCCcCChHHHHHHHHHHHccCCCCCEEECCCCcC
Confidence 1222 235677777777776532111121111 1244566667777764
No 36
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.34 E-value=9.6e-08 Score=72.41 Aligned_cols=84 Identities=29% Similarity=0.214 Sum_probs=62.8
Q ss_pred cCCCCCCCCEEEccCCCCCCCC--CCCccCCcccceeecccccCCCCCchhhhcCccCCeeeccCCcCCCCCch------
Q 024203 90 YLSNCTNLQSLDLSSNALTGSI--PADLQYLVNLAVLNLSANRLAGEIPPQLTLCAYLNVIDLHDNLLTGQIPQ------ 161 (271)
Q Consensus 90 ~l~~l~~L~~L~Ls~N~l~~~~--p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~------ 161 (271)
....+++|++|+|++|+++..- +..+..+++|+.|++++|.++...+-.......|+.+++++|.+......
T Consensus 60 ~~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~~~~~~~~~y~~ 139 (162)
T d1koha1 60 IEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQSTYIS 139 (162)
T ss_dssp HHHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCCTTSTTSSSSSSHHHHHH
T ss_pred HHHhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccccchhhhhhhccccceeecCCCCcCcCcccchhHHH
Confidence 3456889999999999998432 34466789999999999999843332344456799999999999865442
Q ss_pred -hccCCCCCCEEE
Q 024203 162 -QLGLLVRLSAFD 173 (271)
Q Consensus 162 -~~~~l~~L~~L~ 173 (271)
.+..+++|+.||
T Consensus 140 ~i~~~~P~L~~LD 152 (162)
T d1koha1 140 AIRERFPKLLRLD 152 (162)
T ss_dssp HHHTTSTTCCEET
T ss_pred HHHHHCCCCCEEC
Confidence 256788888886
No 37
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=98.21 E-value=3e-08 Score=84.21 Aligned_cols=38 Identities=24% Similarity=0.358 Sum_probs=21.3
Q ss_pred CCCeeEEEeeCCCCccc----CCccCCCCCCCCEEEccCCCC
Q 024203 70 NGRIYKLSLTNLSLQGS----ISPYLSNCTNLQSLDLSSNAL 107 (271)
Q Consensus 70 ~~~l~~L~L~~n~l~~~----~p~~l~~l~~L~~L~Ls~N~l 107 (271)
.++|+.|++++|.+... +...+...++|++|++++|.+
T Consensus 92 ~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~n~l 133 (344)
T d2ca6a1 92 CPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGL 133 (344)
T ss_dssp CTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCC
T ss_pred CCCcccccccccccccccccchhhhhcccccchheecccccc
Confidence 45666777776666532 222333456666666666654
No 38
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.15 E-value=2.8e-08 Score=86.59 Aligned_cols=139 Identities=22% Similarity=0.093 Sum_probs=92.0
Q ss_pred cCCCeeEEEeeCCCCcccCC----ccC-CCCCCCCEEEccCCCCCCCCCCC----ccCCcccceeecccccCCCC----C
Q 024203 69 NNGRIYKLSLTNLSLQGSIS----PYL-SNCTNLQSLDLSSNALTGSIPAD----LQYLVNLAVLNLSANRLAGE----I 135 (271)
Q Consensus 69 ~~~~l~~L~L~~n~l~~~~p----~~l-~~l~~L~~L~Ls~N~l~~~~p~~----~~~l~~L~~L~Ls~N~l~~~----~ 135 (271)
..+.++.+++++|.+..... ..+ .....|+.+++++|.++...... +...++|++|+|++|.+++. +
T Consensus 281 ~~~~l~~l~l~~n~i~~~~~~~l~~~l~~~~~~L~~l~l~~~~l~~~~~~~l~~~~~~~~~L~~L~Ls~N~i~~~g~~~l 360 (460)
T d1z7xw1 281 AKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVREL 360 (460)
T ss_dssp HCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHH
T ss_pred ccccccccccccccccccccchhhccccccccccccccccccchhhhhhhhcccccccccchhhhheeeecccCcccchh
Confidence 46788999999998863211 111 23467999999999887432222 23456899999999998642 2
Q ss_pred chhhh-cCccCCeeeccCCcCCCC----CchhccCCCCCCEEEccCCCCCCCCChhhhcc-CCCCCCccCCCCcCCCC
Q 024203 136 PPQLT-LCAYLNVIDLHDNLLTGQ----IPQQLGLLVRLSAFDVSNNKLSGPIPASLGNR-SGNLPKFNASSFEGNKD 207 (271)
Q Consensus 136 p~~~~-~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~-~~~l~~l~~~~~~~N~~ 207 (271)
+..+. ..+.|++|++++|.++.. +++.+...++|++|++++|+++......+... ......++.+++.+|.+
T Consensus 361 ~~~l~~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~l~l~~~~~ 438 (460)
T d1z7xw1 361 CQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYW 438 (460)
T ss_dssp HHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTTCCC
T ss_pred hhhhhcccCCCCEEECCCCCCChHHHHHHHHHHhcCCCCCEEECCCCcCCHHHHHHHHHHHHhCCCccCEEECCCCCC
Confidence 23332 346799999999999743 44556677899999999999875433333221 11223566777777765
No 39
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=97.74 E-value=3.3e-06 Score=63.90 Aligned_cols=63 Identities=14% Similarity=0.256 Sum_probs=30.6
Q ss_pred CcccceeecccccCCC----CCchhhhcCccCCeeeccCCcCCCC----CchhccCCCCCCEEEccCCCCC
Q 024203 118 LVNLAVLNLSANRLAG----EIPPQLTLCAYLNVIDLHDNLLTGQ----IPQQLGLLVRLSAFDVSNNKLS 180 (271)
Q Consensus 118 l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~ 180 (271)
.+.|+.|++++|.+.. .+...+...+.|+.|++++|.++.. +-..+...++|++|++++|.+.
T Consensus 43 n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~l~~aL~~n~sL~~L~l~~n~~~ 113 (167)
T d1pgva_ 43 SKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQS 113 (167)
T ss_dssp CSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSC
T ss_pred CCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHHHHHHHHhCCcCCEEECCCCcCC
Confidence 3444555555544431 1112233345566666666655532 1223445566777777666544
No 40
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=97.35 E-value=4.6e-05 Score=57.34 Aligned_cols=109 Identities=13% Similarity=0.161 Sum_probs=71.0
Q ss_pred cCCCeeEEEeeCC-CCccc----CCccCCCCCCCCEEEccCCCCCCC----CCCCccCCcccceeecccccCCCCC----
Q 024203 69 NNGRIYKLSLTNL-SLQGS----ISPYLSNCTNLQSLDLSSNALTGS----IPADLQYLVNLAVLNLSANRLAGEI---- 135 (271)
Q Consensus 69 ~~~~l~~L~L~~n-~l~~~----~p~~l~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~---- 135 (271)
+.++++.|+|+++ .+... +-..+...+.|++|++++|.+... +...+...+.|+.|++++|.++..-
T Consensus 13 n~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~l 92 (167)
T d1pgva_ 13 DDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARL 92 (167)
T ss_dssp TCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHH
T ss_pred CCCCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHHH
Confidence 4578899999874 45421 233466678899999999988632 2233445678999999999887422
Q ss_pred chhhhcCccCCeeeccCCcCCCC-------CchhccCCCCCCEEEccCC
Q 024203 136 PPQLTLCAYLNVIDLHDNLLTGQ-------IPQQLGLLVRLSAFDVSNN 177 (271)
Q Consensus 136 p~~~~~l~~L~~L~Ls~N~l~~~-------~p~~~~~l~~L~~L~l~~N 177 (271)
-..+...++|++|++++|.+... +...+...++|+.|+++.+
T Consensus 93 ~~aL~~n~sL~~L~l~~n~~~~~g~~~~~~l~~~L~~n~sL~~l~l~~~ 141 (167)
T d1pgva_ 93 LRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFA 141 (167)
T ss_dssp HHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCC
T ss_pred HHHHHhCCcCCEEECCCCcCCCccHHHHHHHHHHHHhCCCccEeeCcCC
Confidence 12344557799999998876521 2233444566777766554
No 41
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=97.11 E-value=2.2e-05 Score=58.96 Aligned_cols=63 Identities=14% Similarity=0.223 Sum_probs=31.3
Q ss_pred CCCeeEEEeeC-CCCccc----CCccCCCCCCCCEEEccCCCCCCC----CCCCccCCcccceeecccccCC
Q 024203 70 NGRIYKLSLTN-LSLQGS----ISPYLSNCTNLQSLDLSSNALTGS----IPADLQYLVNLAVLNLSANRLA 132 (271)
Q Consensus 70 ~~~l~~L~L~~-n~l~~~----~p~~l~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~ 132 (271)
.++|++|++++ +.++.. +-..+...++|++|++++|.++.. +...+...++++.+++++|.++
T Consensus 16 ~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~ 87 (166)
T d1io0a_ 16 DPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFIS 87 (166)
T ss_dssp CTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCC
T ss_pred CCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhcccccc
Confidence 35566666665 334311 223344556666666666665421 1112233455566666655554
No 42
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=96.48 E-value=9.3e-05 Score=55.39 Aligned_cols=89 Identities=13% Similarity=0.255 Sum_probs=61.6
Q ss_pred CCCCCCCEEEccC-CCCCCC----CCCCccCCcccceeecccccCCCCCc----hhhhcCccCCeeeccCCcCCCC----
Q 024203 92 SNCTNLQSLDLSS-NALTGS----IPADLQYLVNLAVLNLSANRLAGEIP----PQLTLCAYLNVIDLHDNLLTGQ---- 158 (271)
Q Consensus 92 ~~l~~L~~L~Ls~-N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p----~~~~~l~~L~~L~Ls~N~l~~~---- 158 (271)
.+.+.|++|++++ +.++.. +-..+...++|++|++++|.++...- ..+...+.++.+++++|.++..
T Consensus 14 ~~~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~ 93 (166)
T d1io0a_ 14 NNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILA 93 (166)
T ss_dssp TTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHH
T ss_pred hcCCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHHH
Confidence 4568899999997 456521 22334567899999999998874322 2345668899999999988743
Q ss_pred CchhccCCCCCCEEEcc--CCCCC
Q 024203 159 IPQQLGLLVRLSAFDVS--NNKLS 180 (271)
Q Consensus 159 ~p~~~~~l~~L~~L~l~--~N~l~ 180 (271)
+-..+...++|+.++++ +|.+.
T Consensus 94 l~~~l~~~~~L~~l~L~l~~n~i~ 117 (166)
T d1io0a_ 94 LVEALQSNTSLIELRIDNQSQPLG 117 (166)
T ss_dssp HHHGGGGCSSCCEEECCCCSSCCC
T ss_pred HHHHHHhCccccEEeeccCCCcCc
Confidence 23456677889876665 55664
No 43
>d1fftb2 f.17.2.1 (B:27-117) Cytochrome O ubiquinol oxidase, subunit II {Escherichia coli [TaxId: 562]}
Probab=42.11 E-value=3.6 Score=26.22 Aligned_cols=13 Identities=15% Similarity=0.118 Sum_probs=5.2
Q ss_pred HHHHHHHhhhhhc
Q 024203 240 ISFTGVCIWLKVT 252 (271)
Q Consensus 240 ~~~~~~~~~~~~~ 252 (271)
.+..+.+.++.|+
T Consensus 33 ~~~~~~~~~ryR~ 45 (91)
T d1fftb2 33 ILMAVGFAWKYRA 45 (91)
T ss_dssp HHHHHTTTTTTTT
T ss_pred HHHHHhhheeeec
Confidence 3333444444333
Done!