Query 024204
Match_columns 271
No_of_seqs 199 out of 1471
Neff 7.8
Searched_HMMs 46136
Date Fri Mar 29 02:51:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024204.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/024204hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0697 Protein phosphatase 1B 100.0 6.6E-44 1.4E-48 307.4 15.3 198 51-267 17-246 (379)
2 PF00481 PP2C: Protein phospha 100.0 5.9E-43 1.3E-47 309.2 15.4 195 57-267 1-217 (254)
3 KOG0698 Serine/threonine prote 100.0 7.1E-42 1.5E-46 313.0 21.7 197 57-268 41-260 (330)
4 PLN03145 Protein phosphatase 2 100.0 1.4E-41 3E-46 313.6 22.6 197 55-267 64-285 (365)
5 PTZ00224 protein phosphatase 2 100.0 4.4E-38 9.5E-43 291.4 22.1 188 52-267 18-226 (381)
6 KOG0699 Serine/threonine prote 100.0 1.8E-38 4E-43 282.2 11.4 112 141-267 329-452 (542)
7 KOG0700 Protein phosphatase 2C 100.0 8.1E-36 1.8E-40 270.2 16.8 172 87-268 96-347 (390)
8 COG0631 PTC1 Serine/threonine 100.0 1.2E-32 2.6E-37 244.6 15.0 188 53-267 5-211 (262)
9 smart00332 PP2Cc Serine/threon 100.0 1.3E-28 2.9E-33 215.9 22.7 190 55-267 5-214 (255)
10 cd00143 PP2Cc Serine/threonine 100.0 2.6E-28 5.6E-33 213.4 21.3 189 57-267 2-211 (254)
11 PRK14559 putative protein seri 100.0 1.3E-28 2.8E-33 240.2 17.1 187 54-263 373-585 (645)
12 KOG1323 Serine/threonine phosp 99.9 6.9E-25 1.5E-29 194.0 14.4 165 86-267 140-424 (493)
13 KOG0618 Serine/threonine phosp 99.7 7.9E-17 1.7E-21 158.9 9.1 190 52-266 518-730 (1081)
14 PF13672 PP2C_2: Protein phosp 99.7 1.1E-15 2.3E-20 131.1 14.4 159 61-267 3-183 (212)
15 smart00331 PP2C_SIG Sigma fact 99.5 1.9E-12 4.2E-17 109.2 15.5 143 67-267 14-165 (193)
16 KOG1379 Serine/threonine prote 99.3 1E-10 2.2E-15 104.1 15.1 155 68-267 89-262 (330)
17 TIGR02865 spore_II_E stage II 98.5 1.6E-06 3.4E-11 88.0 14.9 153 54-266 550-712 (764)
18 PF07228 SpoIIE: Stage II spor 98.2 4.9E-05 1.1E-09 63.7 14.1 127 90-265 4-138 (193)
19 COG2208 RsbU Serine phosphatas 85.9 22 0.00049 32.9 13.3 123 89-263 174-308 (367)
20 PRK10693 response regulator of 40.3 2.7E+02 0.0059 24.9 11.1 74 92-169 165-254 (303)
21 PF05785 CNF1: Rho-activating 31.6 52 0.0011 29.6 3.3 26 138-164 128-153 (281)
22 TIGR00067 glut_race glutamate 21.5 42 0.00091 29.5 0.9 22 93-114 1-23 (251)
No 1
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms]
Probab=100.00 E-value=6.6e-44 Score=307.38 Aligned_cols=198 Identities=31% Similarity=0.499 Sum_probs=169.4
Q ss_pred cceeeEEEEEeccCCCCCCCCceEEEecCCCCCCCCCCceeEEEEEcCCCChHHHHHHHHHHHHHHHHccC-------ch
Q 024204 51 IDFVEIEADAAEDKGSRHTMEDASVVLVDASSDSPPNLRCAHFAIFDGHGGRLAAEYAQKRLHANVISAGL-------PR 123 (271)
Q Consensus 51 ~~~~~~~~g~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~lfgVfDGHgG~~as~~a~~~l~~~l~~~~~-------~~ 123 (271)
.....+.||.++++|||..|||++.+.-.++. +-.+++||||||||.|+.+|.+++++|.+.|..... ..
T Consensus 17 G~GNglryg~SSMQGWR~eMEDah~A~~~l~~---~l~dWSfFAVfDGHAGs~va~~c~~hLlehi~sse~F~~~~k~gs 93 (379)
T KOG0697|consen 17 GEGNGLRYGVSSMQGWRVEMEDAHTAVAGLPS---PLEDWSFFAVFDGHAGSQVANHCAEHLLEHIISSEEFRGMTKNGS 93 (379)
T ss_pred CcCCceeeeeccccchhhhhhhhhhhhhcCCC---CccCceEEEEEcCccchHHHHHHHHHHHHHhhhhHHHhhhccCCc
Confidence 34567899999999999999999998766643 334679999999999999999999999998875311 10
Q ss_pred -----------HHHHHHHHHHhh--hcCCCCCCCeEEEEEEeCCeEEEEEeCcceEEEEeeccCCCCCCCccccCceeEE
Q 024204 124 -----------FRKTDESLLQES--VSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAI 190 (271)
Q Consensus 124 -----------f~~~d~~~~~~~--~~~~~~~GsTa~~~~i~~~~l~vanvGDSravl~~~~~~~g~~~~~~~~~~~~~~ 190 (271)
|+++|+.+.... .....++||||+++++.+.++|++|+|||||+|||++ .+.
T Consensus 94 v~~~~~GIrtGFL~iDE~mr~~~~~~~~~drsGsTAVcv~vsp~h~y~~NcGDSRavl~rng---------------~~~ 158 (379)
T KOG0697|consen 94 VENVEKGIRTGFLSIDEIMRTLSDISKGSDRSGSTAVCVFVSPTHIYIINCGDSRAVLCRNG---------------EVV 158 (379)
T ss_pred HHHHHhhHhhcceeHHHHHhhhhhhhcccccCCceEEEEEecCceEEEEecCcchhheecCC---------------ceE
Confidence 788887766533 4455679999999999999999999999999999999 999
Q ss_pred ecCCCCCCCCHhHHHHHHHcCCEEeeCCcccCceeccccccccCCccCc--------eEE---EEEEEeCCCCeEEEEec
Q 024204 191 VVTRVHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKGH--------CIS---FYSATKSIRNIFILLCL 259 (271)
Q Consensus 191 ~LT~dH~~~~~~E~~RI~~~gg~v~~~~r~~g~l~vtRalGd~~~k~~~--------vi~---i~~~~l~~~d~flila~ 259 (271)
.-|.||+|.+|.|++||+.+||.|.- .|++|.|||||||||++||..+ |++ |....-...|+|||+||
T Consensus 159 f~TqDHKP~~p~EkeRIqnAGGSVMI-qRvNGsLAVSRAlGDydyK~v~~kgp~eQlVSPEPev~~~~R~eedeFivlAC 237 (379)
T KOG0697|consen 159 FSTQDHKPYLPKEKERIQNAGGSVMI-QRVNGSLAVSRALGDYDYKNVPGKGPTEQLVSPEPEVYIIERSEEDEFIVLAC 237 (379)
T ss_pred EeccCCCCCChHHHHHHhcCCCeEEE-EEecceeeeehhccCcccccCCCCCchhcccCCCCceEEeeccccCcEEEEEc
Confidence 99999999999999999999999984 5999999999999999999753 333 67777777888999998
Q ss_pred -CchHHhhh
Q 024204 260 -ATFELLVR 267 (271)
Q Consensus 260 -Gl~d~l~d 267 (271)
|+||+|+|
T Consensus 238 DGIwDVMtn 246 (379)
T KOG0697|consen 238 DGIWDVMTN 246 (379)
T ss_pred cchhhhccc
Confidence 99999987
No 2
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 2I0O_A 2POP_C 2POM_A 2J4O_A 2I44_B 3MQ3_A 3N3C_A 2PNQ_B 2P8E_A 2IQ1_A ....
Probab=100.00 E-value=5.9e-43 Score=309.18 Aligned_cols=195 Identities=36% Similarity=0.543 Sum_probs=159.8
Q ss_pred EEEEeccCCCCCCCCceEEEecCCCCCCCCCCceeEEEEEcCCCChHHHHHHHHHHHHHHHHcc---Cc---------hH
Q 024204 57 EADAAEDKGSRHTMEDASVVLVDASSDSPPNLRCAHFAIFDGHGGRLAAEYAQKRLHANVISAG---LP---------RF 124 (271)
Q Consensus 57 ~~g~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~lfgVfDGHgG~~as~~a~~~l~~~l~~~~---~~---------~f 124 (271)
.+|..+.+|+|++|||++++..++... .......+|||||||||..+|++++++|+..+.... .. .|
T Consensus 1 ~~~~~~~~g~r~~~eD~~~~~~~~~~~-~~~~~~~l~~V~DGhgG~~~a~~~~~~l~~~l~~~~~~~~~~~~~~al~~a~ 79 (254)
T PF00481_consen 1 DYGVSSMQGVRKEMEDRHLIIQNFNSN-SGNDNVSLFGVFDGHGGSEAAEYASQNLPEFLKENLSFNDGNDIEEALRQAF 79 (254)
T ss_dssp EEEEEEEECTSSSHHEEEEEEEEETCC-TTEEEEEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred CcCeecCCCCCCcccCEEEEecCcccc-CCCCCcEEEEEecCCCChhhHHHHHHHHHHHHHhhcccccccchhhccccee
Confidence 368899999999999999998866332 344568999999999999999999999997775431 11 16
Q ss_pred HH-HHHHHHHhhhc-CCCCCCCeEEEEEEeCCeEEEEEeCcceEEEEeeccCCCCCCCccccCceeEE-ecCCCCCCCCH
Q 024204 125 RK-TDESLLQESVS-GGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAI-VVTRVHKAIYP 201 (271)
Q Consensus 125 ~~-~d~~~~~~~~~-~~~~~GsTa~~~~i~~~~l~vanvGDSravl~~~~~~~g~~~~~~~~~~~~~~-~LT~dH~~~~~ 201 (271)
.. ++..+...... ....+||||++++|.++++|+||||||||||++.+ ... +||.||+|.++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~GsTa~v~li~~~~l~vanvGDSravl~~~~---------------~~~~~Lt~dH~~~~~ 144 (254)
T PF00481_consen 80 LAFTDESLYSDSENNESSKSGSTATVALIDGNKLYVANVGDSRAVLCRNG---------------GIIKQLTRDHKPSNP 144 (254)
T ss_dssp HHHHHHHHHHHHHHHTHTTSEEEEEEEEEETTEEEEEEESS-EEEEEETT---------------EEEEESS---STTSH
T ss_pred eecccccccccccccccccccccccccccccceeEEEeeeeeeeeeeecc---------------ccccccccccccchh
Confidence 66 66666652222 56689999999999999999999999999999998 666 99999999999
Q ss_pred hHHHHHHHcCCEEeeCCcccCceeccccccccCCcc---CceEE---EEEEEeCCCCeEEEEec-CchHHhhh
Q 024204 202 QERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKK---GHCIS---FYSATKSIRNIFILLCL-ATFELLVR 267 (271)
Q Consensus 202 ~E~~RI~~~gg~v~~~~r~~g~l~vtRalGd~~~k~---~~vi~---i~~~~l~~~d~flila~-Gl~d~l~d 267 (271)
.|+.||+++||.+...+|+.|.|++||||||..+|+ ++|++ +..++++++|+|||+|| ||||+|++
T Consensus 145 ~E~~RI~~~gg~v~~~~rv~g~l~~sRalGd~~~k~~~~~~v~~~P~i~~~~l~~~d~flvlaSDGlwd~l~~ 217 (254)
T PF00481_consen 145 DERERIRKAGGRVSENGRVNGVLAVSRALGDFDLKPPGKPGVIAEPDISEVDLTPDDEFLVLASDGLWDVLSN 217 (254)
T ss_dssp HHHHHHHHTT-GEEETEEETTTBSSSB-EE-GGGTTCTSSSSB---EEEEEEEBTTEEEEEEE-HHHHTTSHH
T ss_pred hccceeeccccccccchhhhhccccccccccccccccccceeeeecccccccccccceEEEEEcccccccCCH
Confidence 999999999999998889999999999999999999 66777 89999999999999888 99999987
No 3
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=7.1e-42 Score=312.99 Aligned_cols=197 Identities=35% Similarity=0.511 Sum_probs=168.1
Q ss_pred EEEEeccCCCCCCCCceEEEecCCCCCCCCCC-ceeEEEEEcCCCChHHHHHHHHHHHHHHHHccC-------------c
Q 024204 57 EADAAEDKGSRHTMEDASVVLVDASSDSPPNL-RCAHFAIFDGHGGRLAAEYAQKRLHANVISAGL-------------P 122 (271)
Q Consensus 57 ~~g~~s~~G~R~~nED~~~~~~~~~~~~~~~~-~~~lfgVfDGHgG~~as~~a~~~l~~~l~~~~~-------------~ 122 (271)
..+.++.+|+|+.|||++....++........ ..+||||||||||+.||+|++++|+..+.++.. .
T Consensus 41 ~~~~~~~~~~r~~med~~~~~~~~~~~~~~~~~~~~ffgVfDGHGG~~~A~~~~~~L~~~l~~~~~~~~~~~~~~~a~~~ 120 (330)
T KOG0698|consen 41 LGSLLSIRGRRRKMEDRHVQLPDFLEEDVGGEQDTAFFGVFDGHGGDLAAKFAAKHLHKNLLEQLAFPKDRQDVKDALRR 120 (330)
T ss_pred ceEEEecCCCCCccCcceeecccccccccCCCCceEEEEEEeCCCCHHHHHHHHHHHHHHHHhhhhcccchHHHHHHHHH
Confidence 34566889999999999999887654222333 689999999999999999999999999986421 1
Q ss_pred hHH-HHHHHHHHhhhcCCCCCCCeEEEEEEeCC-eEEEEEeCcceEEEEeeccCCCCCCCccccCceeEEecCCCCCCCC
Q 024204 123 RFR-KTDESLLQESVSGGWQDGATAVCIWILGR-TVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIY 200 (271)
Q Consensus 123 ~f~-~~d~~~~~~~~~~~~~~GsTa~~~~i~~~-~l~vanvGDSravl~~~~~~~g~~~~~~~~~~~~~~~LT~dH~~~~ 200 (271)
.|. .+|..+... ......+|||++++++..+ +|||||+||||||||+++ + .+++||.||+|..
T Consensus 121 ~F~~~~D~~~~~~-~~~~~~~gstav~~vi~~~~~l~vaN~GDSRaVl~~~~---~-----------~a~~Ls~DHkP~~ 185 (330)
T KOG0698|consen 121 AFLTKTDSEFLEK-REDNRSGGSTAVVALIKKGRKLYVANVGDSRAVLSRKG---G-----------VAVQLSVDHKPDR 185 (330)
T ss_pred HHHHHHHHHHHhh-ccCCCCCcceeeeeeEecCCEEEEEEcCCCcEEEecCC---C-----------eeeeCCCCCCCCc
Confidence 188 588888865 2224678999999888855 999999999999999875 2 7999999999999
Q ss_pred HhHHHHHHHcCCEEeeC---CcccCceeccccccccCCccCceEE---EEEEEeCCCCeEEEEec-CchHHhhhh
Q 024204 201 PQERARIQKSGGTVSSN---GRLQGRLEVSRAFGDRQFKKGHCIS---FYSATKSIRNIFILLCL-ATFELLVRF 268 (271)
Q Consensus 201 ~~E~~RI~~~gg~v~~~---~r~~g~l~vtRalGd~~~k~~~vi~---i~~~~l~~~d~flila~-Gl~d~l~d~ 268 (271)
+.|+.||+++||+|... +|++|.|++||||||+.+|.++|++ +....++..|+|||+|| ||||+|++.
T Consensus 186 ~~E~~RI~~~GG~v~~~~~~~Rv~G~LavsRa~GD~~~k~~~v~a~Pei~~~~~~~~deFLiLasDGiwDv~s~q 260 (330)
T KOG0698|consen 186 EDERERIEAAGGRVSNWGGVWRVNGVLAVSRAFGDVELKSQGVIAEPEIQQVKINSDDEFLILASDGIWDVVSNQ 260 (330)
T ss_pred HHHHHHHHHcCCEEEEcCCcceEeceEEEeeecCCHHhcCCcEecCCceEEEEcCCCCcEEEEeCCchhcccChH
Confidence 99999999999999965 3999999999999999999777887 88899999999999999 999999984
No 4
>PLN03145 Protein phosphatase 2c; Provisional
Probab=100.00 E-value=1.4e-41 Score=313.60 Aligned_cols=197 Identities=31% Similarity=0.527 Sum_probs=163.6
Q ss_pred eEEEEEeccCCCCCCCCceEEEecCCCC----CCCCCCceeEEEEEcCCCChHHHHHHHHHHHHHHHHcc-Cc-------
Q 024204 55 EIEADAAEDKGSRHTMEDASVVLVDASS----DSPPNLRCAHFAIFDGHGGRLAAEYAQKRLHANVISAG-LP------- 122 (271)
Q Consensus 55 ~~~~g~~s~~G~R~~nED~~~~~~~~~~----~~~~~~~~~lfgVfDGHgG~~as~~a~~~l~~~l~~~~-~~------- 122 (271)
.+.++.++++|.|++|||++++..++.. ..+......||||||||||+.+|++|+++|++.|.+.. .+
T Consensus 64 ~~~~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~~~~~lf~V~DGhGG~~age~as~~l~~~i~~~~~~~~~~~~al 143 (365)
T PLN03145 64 VVRSGAWADIGSRSSMEDVYICVDNFMSDFGLKNSEDGPSAFYGVFDGHGGKHAADFACYHLPRFIVEDEDFPREIEKVV 143 (365)
T ss_pred ceEEEEEccccCCCCCCCceEecccccccccccccCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHhhhccchhHHHHH
Confidence 4678999999999999999988665421 11122346899999999999999999999999887531 11
Q ss_pred --hHHHHHHHHHHhhhc-CCCCCCCeEEEEEEeCCeEEEEEeCcceEEEEeeccCCCCCCCccccCceeEEecCCCCCCC
Q 024204 123 --RFRKTDESLLQESVS-GGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAI 199 (271)
Q Consensus 123 --~f~~~d~~~~~~~~~-~~~~~GsTa~~~~i~~~~l~vanvGDSravl~~~~~~~g~~~~~~~~~~~~~~~LT~dH~~~ 199 (271)
.|..+++.|.+.... ....+|||++++++.++++|+||||||||||++.+ ++.+||.||+|.
T Consensus 144 ~~af~~~d~~~~~~~~~~~~~~~GTTavv~li~~~~l~vaNvGDSRayl~r~g---------------~~~~LT~DH~~~ 208 (365)
T PLN03145 144 SSAFLQTDTAFAEACSLDASLASGTTALAALVVGRSLVVANAGDCRAVLCRRG---------------KAIEMSRDHKPM 208 (365)
T ss_pred HHHHHHHhHHHHhhhccccCCCCcCcEEEEEEECCeEEEEecCCceEEEEcCC---------------eEEEecCCCCCC
Confidence 177788887664432 23458999999999999999999999999999998 999999999999
Q ss_pred CHhHHHHHHHcCCEEeeCCcccCceeccccccccCCccC------ceEE---EEEEEeCCCCeEEEEec-CchHHhhh
Q 024204 200 YPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKG------HCIS---FYSATKSIRNIFILLCL-ATFELLVR 267 (271)
Q Consensus 200 ~~~E~~RI~~~gg~v~~~~r~~g~l~vtRalGd~~~k~~------~vi~---i~~~~l~~~d~flila~-Gl~d~l~d 267 (271)
++.|++||++.||.+. ++|++|.+++||||||+.+|.. ++++ +..++|+++|.|||+|| ||||+|++
T Consensus 209 ~~~E~~RI~~~Gg~v~-~g~v~g~l~vTRalGD~~~k~~k~~~~~~vs~ePdv~~~~l~~~D~fLILaSDGLwdvls~ 285 (365)
T PLN03145 209 CSKERKRIEASGGYVY-DGYLNGQLNVARALGDWHMEGMKGSDGGPLSAEPELMTTQLTEEDEFLIIGCDGIWDVFRS 285 (365)
T ss_pred CHHHHHHHHHcCCcee-cceECCccccccccccccccccccccCCCcceEEEEEEEECCCCCEEEEEeCCccccCcCH
Confidence 9999999999999997 6799999999999999888642 2433 88899999999987666 99999987
No 5
>PTZ00224 protein phosphatase 2C; Provisional
Probab=100.00 E-value=4.4e-38 Score=291.39 Aligned_cols=188 Identities=30% Similarity=0.454 Sum_probs=154.4
Q ss_pred ceeeEEEEEeccCCCCCCCCceEEEecCCCCCCCCCCceeEEEEEcCCCChHHHHHHHHHHHHHHHHccCc--------h
Q 024204 52 DFVEIEADAAEDKGSRHTMEDASVVLVDASSDSPPNLRCAHFAIFDGHGGRLAAEYAQKRLHANVISAGLP--------R 123 (271)
Q Consensus 52 ~~~~~~~g~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~lfgVfDGHgG~~as~~a~~~l~~~l~~~~~~--------~ 123 (271)
....+.+|..+.+|+|++|||++++..+ ....||||||||||.+||++++++|+..+...... .
T Consensus 18 ~~~~~~~g~~s~~G~R~~nED~~~v~~~--------~~~~lfgVfDGHgG~~~S~~~~~~l~~~l~~~~~~~~~~~l~~a 89 (381)
T PTZ00224 18 GNSIFRCASACVNGYRESMEDAHLLYLT--------DDWGFFGVFDGHVNDECSQYLARAWPQALEKEPEPMTDERMEEL 89 (381)
T ss_pred CCccEEEEEEeCCCCCCCCCCeeEeccC--------CCceEEEEEeCCCcHHHHHHHHHHHHHHHHhccccccHHHHHHH
Confidence 3456889999999999999999886532 13469999999999999999999999887543221 1
Q ss_pred HHHHHHHHHHhhhcCCCCCCCeEEEEEEe-CCeEEEEEeCcceEEEEeeccCCCCCCCccccCceeEEecCCCCCCCCHh
Q 024204 124 FRKTDESLLQESVSGGWQDGATAVCIWIL-GRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQ 202 (271)
Q Consensus 124 f~~~d~~~~~~~~~~~~~~GsTa~~~~i~-~~~l~vanvGDSravl~~~~~~~g~~~~~~~~~~~~~~~LT~dH~~~~~~ 202 (271)
|..+++.+.+.. ..+|||++++++. +.++|||||||||+||+|.+ ++.+||.||+|.++.
T Consensus 90 ~~~~d~~i~~~~----~~~GsTatv~lI~~~~~l~vaNVGDSRayl~r~g---------------~~~~LT~DH~~~~~~ 150 (381)
T PTZ00224 90 CLEIDEEWMDSG----REGGSTGTFCVIMKDVHLQVGNVGDSRVLVCRDG---------------KLVFATEDHKPNNPG 150 (381)
T ss_pred HHHHHHHHHhcc----cCCCCeEEEEEEEECCEEEEEEcccceEEEEECC---------------EEEEcccCCCCCCHH
Confidence 667777776432 2469999998876 57999999999999999998 999999999999999
Q ss_pred HHHHHHHcCCEEeeCCcccCceeccccccccCCccCc--------eEE---EEEEEeCCCCeEEEEecCchH-Hhhh
Q 024204 203 ERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKGH--------CIS---FYSATKSIRNIFILLCLATFE-LLVR 267 (271)
Q Consensus 203 E~~RI~~~gg~v~~~~r~~g~l~vtRalGd~~~k~~~--------vi~---i~~~~l~~~d~flila~Gl~d-~l~d 267 (271)
|++||.++||.+. .+|++|.+++||||||..+|..+ +++ +..+++.++|.+||++||||| ++++
T Consensus 151 E~~RI~~~gg~v~-~~Rv~G~l~vTRalGd~~~K~~~~~~~~~~~v~~~Pdi~~~~l~~~D~llLaSDGL~d~~ls~ 226 (381)
T PTZ00224 151 ERQRIEACGGRVV-SNRVDGDLAVSRAFGDRSFKVKGTGDYLEQKVIAVPDVTHLTCQSNDFIILACDGVFEGNFSN 226 (381)
T ss_pred HHhHHHHccCEec-cccccCceeeecccCCcccccccccccccCcceeeeEEEEEECCCCCEEEEECCCcCcCccCH
Confidence 9999999999997 46999999999999998876543 333 778889888765666669999 6765
No 6
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-38 Score=282.18 Aligned_cols=112 Identities=33% Similarity=0.534 Sum_probs=105.3
Q ss_pred CCCCeEEEEEEeCCeEEEEEeCcceEEEEeeccCCCCCCCccccCceeEEecCCCCCCCCHhHHHHHHHcCCEEeeCCcc
Q 024204 141 QDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTVSSNGRL 220 (271)
Q Consensus 141 ~~GsTa~~~~i~~~~l~vanvGDSravl~~~~~~~g~~~~~~~~~~~~~~~LT~dH~~~~~~E~~RI~~~gg~v~~~~r~ 220 (271)
.+||||+||++.+++|||||.|||||||+|.| +++.|+.||+|.+..|..||.++||.|.-+|||
T Consensus 329 DSGtTAvVcLv~g~~liVANAGDSRcV~sr~G---------------kAvdmS~DHKPEDevE~~RI~~AGG~vtlDGRV 393 (542)
T KOG0699|consen 329 DSGTTAVVCLVGGDKLIVANAGDSRCVLSRNG---------------KAVDMSVDHKPEDEVETNRIHAAGGQVTLDGRV 393 (542)
T ss_pred CCCceEEEEEecCceEEEecCCCcceEEecCC---------------ceeecccCCCcccHHHHHHHHhcCCeEeeccee
Confidence 57999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred cCceeccccccccCCccCc-------eEE----EEEEEeCCCCeEEEEec-CchHHhhh
Q 024204 221 QGRLEVSRAFGDRQFKKGH-------CIS----FYSATKSIRNIFILLCL-ATFELLVR 267 (271)
Q Consensus 221 ~g~l~vtRalGd~~~k~~~-------vi~----i~~~~l~~~d~flila~-Gl~d~l~d 267 (271)
+|.|.++|||||..||..- +|+ |..+.|++.|+|+|+|| |+|.+|+.
T Consensus 394 NGGLNLSRA~GDHaYK~N~~Lp~eEQMIsALPDiK~l~lTpedEFmVvACDGIWN~MsS 452 (542)
T KOG0699|consen 394 NGGLNLSRAFGDHAYKKNQELPLEEQMISALPDIKILALTPEDEFMVVACDGIWNSMSS 452 (542)
T ss_pred cCccchhhhhhhhhhhcccCCChHHHHhhhcccceeEeecCcccEEEEEccchhhhccH
Confidence 9999999999999999863 222 89999999999999998 99999875
No 7
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=8.1e-36 Score=270.24 Aligned_cols=172 Identities=27% Similarity=0.347 Sum_probs=144.2
Q ss_pred CCceeEEEEEcCCCChHHHHHHHHHHHHHHHHccC---------------------------------c-h---------
Q 024204 87 NLRCAHFAIFDGHGGRLAAEYAQKRLHANVISAGL---------------------------------P-R--------- 123 (271)
Q Consensus 87 ~~~~~lfgVfDGHgG~~as~~a~~~l~~~l~~~~~---------------------------------~-~--------- 123 (271)
...+.|+||||||||.+|++|++++|..++..+.. + .
T Consensus 96 ~~~~~fvGIyDGhgGp~as~~v~~~L~~~v~~~L~~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~~~~~~~v~~al~~ 175 (390)
T KOG0700|consen 96 ENGWLFVGIYDGHGGPDASRFLSDHLYPYVARELQGLLWQDEERFPSEYKSEELEHLLVYWKQLSSADQRHGDVLEALSK 175 (390)
T ss_pred cCCeEEEEEecCCCCccHHHHHHHHHHHHHHHHhhhhhhhhccccccccccchhhhhhhhhhcccccCccchhHHHHHHH
Confidence 34678999999999999999999999998872110 1 1
Q ss_pred -HHHHHHHHHHhhhc------CCCCCCCeEEEEEEeCCeEEEEEeCcceEEEEeeccCCCCCCCccccCc-eeEEecCCC
Q 024204 124 -FRKTDESLLQESVS------GGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSS-LKAIVVTRV 195 (271)
Q Consensus 124 -f~~~d~~~~~~~~~------~~~~~GsTa~~~~i~~~~l~vanvGDSravl~~~~~~~g~~~~~~~~~~-~~~~~LT~d 195 (271)
|.++++.|+..... .-..+||||++.++.+..|||||+|||||||++.. +.++ |.+.|||.|
T Consensus 176 Af~~tee~fl~~v~~~~~~~p~lA~~GSC~Lv~~i~~~~LyVaN~GDSRAVLG~~~----------~~~~~~~A~qLS~d 245 (390)
T KOG0700|consen 176 AFEATEEDFLEMVDKQLQENPELALVGSCCLVGLIKGGDLYVANVGDSRAVLGVVE----------NNGSWLVAVQLSTD 245 (390)
T ss_pred HHHHHHHHHHHHHHHhhccchhhhhhcceEEEEEEeCCeEEEEecCcchhhhceec----------CCCCeEEEEecChh
Confidence 89999998765532 12346999999999999999999999999998887 2333 799999999
Q ss_pred CCCCCHhHHHHHHHcCC-----EEeeCCcccCceeccccccccCCccCc--------------------eEE---EEEEE
Q 024204 196 HKAIYPQERARIQKSGG-----TVSSNGRLQGRLEVSRAFGDRQFKKGH--------------------CIS---FYSAT 247 (271)
Q Consensus 196 H~~~~~~E~~RI~~~gg-----~v~~~~r~~g~l~vtRalGd~~~k~~~--------------------vi~---i~~~~ 247 (271)
|+..+++|++||+..++ .+...||+.|.|.+||||||.++|.+. +++ |+.+.
T Consensus 246 Hn~~ne~Ev~Rir~eHPdd~~~vv~~~~RvkG~L~vsRAfGd~~lK~~~~n~e~l~~~fr~~~~~t~PyltaeP~i~~Hr 325 (390)
T KOG0700|consen 246 HNASNEDEVRRIRSEHPDDPHIVVNKHWRVKGILQVSRAFGDGYLKWPEFNQEPLLEKFRIPYIGTPPYLTAEPSITHHK 325 (390)
T ss_pred hccccHHHHHHHHHhCCCCcceEeeccceeeEEEEeeeeccceeecchhhccchhHhhcCCCCCCCCCceeccceEEEEE
Confidence 99999999999999986 333346999999999999999999762 222 99999
Q ss_pred eCCCCeEEEEec-CchHHhhhh
Q 024204 248 KSIRNIFILLCL-ATFELLVRF 268 (271)
Q Consensus 248 l~~~d~flila~-Gl~d~l~d~ 268 (271)
|+++|+|||+|| ||||.|+|-
T Consensus 326 L~p~DkFLIlASDGLwE~lsNe 347 (390)
T KOG0700|consen 326 LTPNDKFLILASDGLWEYLSNE 347 (390)
T ss_pred cCCCCeEEEEeccchhhhcChH
Confidence 999999999999 999999983
No 8
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-32 Score=244.60 Aligned_cols=188 Identities=23% Similarity=0.280 Sum_probs=147.0
Q ss_pred eeeEEEEEeccCC-CCCCCCceEEEecCCCCCCCCCCceeEEEEEcCCCChHHHHHHHHHHHHHHHHccCc---------
Q 024204 53 FVEIEADAAEDKG-SRHTMEDASVVLVDASSDSPPNLRCAHFAIFDGHGGRLAAEYAQKRLHANVISAGLP--------- 122 (271)
Q Consensus 53 ~~~~~~g~~s~~G-~R~~nED~~~~~~~~~~~~~~~~~~~lfgVfDGHgG~~as~~a~~~l~~~l~~~~~~--------- 122 (271)
.+.+.++..++.| .|..|||++.+..+. .+.. ..||+|||||||++++++|++.+.+.|.+....
T Consensus 5 ~~~~~~~~~s~~g~~R~~NeD~~~~~~~~----~~~~-~~l~~V~DG~GGh~~ge~aS~~~v~~l~~~~~~~~~~~~~~~ 79 (262)
T COG0631 5 ILSLKVAGLSDVGTVRKHNEDAFLIKPNE----NGNL-LLLFAVADGMGGHAAGEVASKLAVEALARLFDETNFNSLNES 79 (262)
T ss_pred cceeeeeeeccCCCccCCCCcceeecccc----CCcc-eeEEEEEeCccchhHHHHHHHHHHHHHHHHHHhccccccchh
Confidence 3456667777777 588999999997632 2222 579999999999999999999998888654111
Q ss_pred --h-----HHHHHHHHHHhhh--cCCCCCCCeEEEEEEeCCeEEEEEeCcceEEEEeeccCCCCCCCccccCceeEEecC
Q 024204 123 --R-----FRKTDESLLQESV--SGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVT 193 (271)
Q Consensus 123 --~-----f~~~d~~~~~~~~--~~~~~~GsTa~~~~i~~~~l~vanvGDSravl~~~~~~~g~~~~~~~~~~~~~~~LT 193 (271)
. +..++..+..... .....+|||++++++.++++|+|||||||+||++++ .+++||
T Consensus 80 ~~~~l~~~~~~~n~~i~~~~~~~~~~~~mgtTl~~~~~~~~~l~~a~vGDSR~yl~~~~---------------~~~~lT 144 (262)
T COG0631 80 LEELLKEAILKANEAIAEEGQLNEDVRGMGTTLVLLLIRGNKLYVANVGDSRAYLLRDG---------------ELKQLT 144 (262)
T ss_pred HHHHHHHHHHHHHHHHHHhhhcccccCCCceeEEEEEEECCeEEEEEccCCeEEEEcCC---------------ceEEec
Confidence 1 5666666665543 344578999999999999999999999999999999 999999
Q ss_pred CCCCCCCHhHHHHHHHcCCEEeeCCcccCceeccccccccCCccCceEEEEEEEeCCCCeEEEEecCchHHhhh
Q 024204 194 RVHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKGHCISFYSATKSIRNIFILLCLATFELLVR 267 (271)
Q Consensus 194 ~dH~~~~~~E~~RI~~~gg~v~~~~r~~g~l~vtRalGd~~~k~~~vi~i~~~~l~~~d~flila~Gl~d~l~d 267 (271)
.||++.+..++.|+...++.... .|. .++|||||+... .++.+....+.++|.||+|+|||||.+++
T Consensus 145 ~DH~~~~~~~~~~~~~~~~~~~~-~~~---~~ltralG~~~~---~~p~~~~~~~~~~d~llL~SDGl~d~v~~ 211 (262)
T COG0631 145 EDHSLVNRLEQRGIITPEEARSH-PRR---NALTRALGDFDL---LEPDITELELEPGDFLLLCSDGLWDVVSD 211 (262)
T ss_pred cCCcHHHHHHHhcCCCHHHHHhC-ccc---hhhhhhcCCCcc---cceeEEEEEcCCCCEEEEECCCCccCcCH
Confidence 99999999999987766654443 233 389999998764 24448889999996666666699999987
No 9
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain. The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=99.97 E-value=1.3e-28 Score=215.94 Aligned_cols=190 Identities=36% Similarity=0.499 Sum_probs=153.0
Q ss_pred eEEEEEeccCCCCCCCCceEEEecCCCCCCCCCCceeEEEEEcCCCChHHHHHHHHHHHHHHHHccC--------ch---
Q 024204 55 EIEADAAEDKGSRHTMEDASVVLVDASSDSPPNLRCAHFAIFDGHGGRLAAEYAQKRLHANVISAGL--------PR--- 123 (271)
Q Consensus 55 ~~~~g~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~lfgVfDGHgG~~as~~a~~~l~~~l~~~~~--------~~--- 123 (271)
.+.++..+.+|.|..|||++++..+. ..+..+|+|||||||+.+|+++++.+...+..... +.
T Consensus 5 ~~~~~~~~~~~~r~~neD~~~~~~~~------~~~~~~~~v~DG~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 78 (255)
T smart00332 5 GLRYGLSSMQGVRKPMEDAHVITPDL------SDSGAFFGVFDGHGGSEAAKFLSKNLPEILAEELIKHKDELEDVEEAL 78 (255)
T ss_pred ceeEEEecCCCCCCCCcceEEEeccC------CCCeEEEEEEeCCCcHHHHHHHHHHHHHHHHHhHhhcccchhHHHHHH
Confidence 45566778888999999999987542 13568999999999999999999999988865311 11
Q ss_pred ---HHHHHHHHHHhhhcC--CCCCCCeEEEEEEeCCeEEEEEeCcceEEEEeeccCCCCCCCccccCceeEEecCCCCCC
Q 024204 124 ---FRKTDESLLQESVSG--GWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKA 198 (271)
Q Consensus 124 ---f~~~d~~~~~~~~~~--~~~~GsTa~~~~i~~~~l~vanvGDSravl~~~~~~~g~~~~~~~~~~~~~~~LT~dH~~ 198 (271)
|..++..+....... ...+|||++++++.++++|++|+||||+|+++.+ .+.+||.||++
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~y~~~~~---------------~~~~lt~dh~~ 143 (255)
T smart00332 79 RKAFLKTDEEILEELESLEEDAGSGSTAVVALISGNKLYVANVGDSRAVLCRNG---------------KAVQLTEDHKP 143 (255)
T ss_pred HHHHHHHHHHHHHhhhhccCCCCCCccEEEEEEECCEEEEEeccCceEEEEeCC---------------ceeEcCCCCCC
Confidence 555555555433222 2457999999999999999999999999999998 88999999999
Q ss_pred CCHhHHHHHHHcCCEEeeCCcccCceeccccccccCCccCceEE---EEEEEe-CCCCeEEEEecCchHHhhh
Q 024204 199 IYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKGHCIS---FYSATK-SIRNIFILLCLATFELLVR 267 (271)
Q Consensus 199 ~~~~E~~RI~~~gg~v~~~~r~~g~l~vtRalGd~~~k~~~vi~---i~~~~l-~~~d~flila~Gl~d~l~d 267 (271)
.+..|..||...++.+. ++++++...+||++|+..+|+. +++ +...++ .++|.+|+|+||+|+.+++
T Consensus 144 ~~~~~~~~i~~~~~~~~-~~~~~~~~~lt~~~g~~~~~~~-i~~~p~~~~~~~~~~~d~ill~SDGv~~~l~~ 214 (255)
T smart00332 144 SNEDERARIEAAGGFVI-NGRVNGVLALSRAIGDFFLKPY-VSAEPDVTVVELTEKDDFLILASDGLWDVLSN 214 (255)
T ss_pred cCHHHHHHHHHcCCEEE-CCeECCeEecccccCCHhhcCC-eEeeeEEEEEEecCCCcEEEEECCccccCCCH
Confidence 99999999999999887 4688888999999999887754 333 666775 7777777777799998876
No 10
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=99.96 E-value=2.6e-28 Score=213.38 Aligned_cols=189 Identities=35% Similarity=0.568 Sum_probs=151.0
Q ss_pred EEEEeccCCCCCCCCceEEEecCCCCCCCCCCceeEEEEEcCCCChHHHHHHHHHHHHHHHHccCc------h-------
Q 024204 57 EADAAEDKGSRHTMEDASVVLVDASSDSPPNLRCAHFAIFDGHGGRLAAEYAQKRLHANVISAGLP------R------- 123 (271)
Q Consensus 57 ~~g~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~lfgVfDGHgG~~as~~a~~~l~~~l~~~~~~------~------- 123 (271)
.++..+..|.|+.|||++++...... .+..+|+|||||||...++++++.+.+.+...... .
T Consensus 2 ~~~~~~~~g~r~~neD~~~~~~~~~~-----~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~~~~~l~ 76 (254)
T cd00143 2 SAGVSDKGGDRKTNEDAVVIKPNLNN-----EDGGLFGVFDGHGGHAAGEFASKLLVEELLEELEETLTLSEEDIEEALR 76 (254)
T ss_pred ceeeecCCCCCCCCcceEEEeccCCC-----CCcEEEEEEcCCChHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHH
Confidence 45677888899999999998653210 24589999999999999999999998887653211 0
Q ss_pred --HHHHHHHHHHhhhc--CCCCCCCeEEEEEEeCCeEEEEEeCcceEEEEeeccCCCCCCCccccCceeEEecCCCCCCC
Q 024204 124 --FRKTDESLLQESVS--GGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAI 199 (271)
Q Consensus 124 --f~~~d~~~~~~~~~--~~~~~GsTa~~~~i~~~~l~vanvGDSravl~~~~~~~g~~~~~~~~~~~~~~~LT~dH~~~ 199 (271)
|..+++.+...... ....+|||++++++.+++++++|+||||+|+++++ .++++|.||++.
T Consensus 77 ~~~~~~~~~l~~~~~~~~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~~~~~~~---------------~~~~lt~dh~~~ 141 (254)
T cd00143 77 KAFLRADEEILEEAQDEPDDARSGTTAVVALIRGNKLYVANVGDSRAVLCRNG---------------EAVQLTKDHKPV 141 (254)
T ss_pred HHHHHHHHHHHHhhhhccCCCCCCCcEEEEEEECCEEEEEEecCcEEEEEcCC---------------ceeEcCCCCCCc
Confidence 56666666554332 34567999999999999999999999999999999 999999999999
Q ss_pred CHhHHHHHHHcCCEEeeCCcccCceeccccccccCCccCceEE---EEEEEe-CCCCeEEEEecCchHHhhh
Q 024204 200 YPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKGHCIS---FYSATK-SIRNIFILLCLATFELLVR 267 (271)
Q Consensus 200 ~~~E~~RI~~~gg~v~~~~r~~g~l~vtRalGd~~~k~~~vi~---i~~~~l-~~~d~flila~Gl~d~l~d 267 (271)
++.++.||...+|.+. ..+.++...+||+||+..+|+. +.+ +..+++ .++|.||+++||+|+.+++
T Consensus 142 ~~~~~~~i~~~~~~~~-~~~~~~~~~~t~~lG~~~~~~~-~~~~~~~~~~~l~~~~d~ill~SDG~~~~l~~ 211 (254)
T cd00143 142 NEEERERIEKAGGRVS-NGRVPGVLAVTRALGDFDLKPG-VSAEPDVTVVKLTEDDDFLILASDGLWDVLSN 211 (254)
T ss_pred ChHHHHHHHHcCCcEE-eCEEcCceeeccccCCccccCC-EEcCCeEEEEEeCCCCcEEEEECCCCeeccCh
Confidence 9999999999999765 4567777899999999877643 222 777888 7777777777799998754
No 11
>PRK14559 putative protein serine/threonine phosphatase; Provisional
Probab=99.96 E-value=1.3e-28 Score=240.23 Aligned_cols=187 Identities=19% Similarity=0.181 Sum_probs=130.3
Q ss_pred eeEEEEEeccCCC-CCCCCceEEEecCCCCC-CCCC---CceeEEEEEcCCCChHH----HHHHHHHHHHHHHHccC---
Q 024204 54 VEIEADAAEDKGS-RHTMEDASVVLVDASSD-SPPN---LRCAHFAIFDGHGGRLA----AEYAQKRLHANVISAGL--- 121 (271)
Q Consensus 54 ~~~~~g~~s~~G~-R~~nED~~~~~~~~~~~-~~~~---~~~~lfgVfDGHgG~~a----s~~a~~~l~~~l~~~~~--- 121 (271)
+.+.++..+++|. |+.|||++.+..++... .+.. ....+|+|||||||+.+ |+++++.|.+++.+...
T Consensus 373 ~~l~~a~~Td~G~~R~~NEDa~~i~~~~~~~~~~~~~~~~~~~L~aVaDGmGGh~~GevAS~lAv~~L~~~~~~~~~~~~ 452 (645)
T PRK14559 373 VSLEDAGRTDVGRQRHHNEDYFGINTRIQKLENPHGRIVQARGLYILCDGMGGHAAGEVASALAVETLQQYFQQHWQDEL 452 (645)
T ss_pred eeEEEEEECCCCCCCcccCCcccccccccccccccccccccceEEEEEeCCCCchhHHHHHHHHHHHHHHHHHhhhcccc
Confidence 4678899999996 99999998775432110 1111 13468999999998765 55555666655543211
Q ss_pred c-------hHHHHHHHHHHhhhc----CCCCCCCeEEEEEEeCCeEEEEEeCcceEEEEe-eccCCCCCCCccccCceeE
Q 024204 122 P-------RFRKTDESLLQESVS----GGWQDGATAVCIWILGRTVFVANIGDAKAVVAR-SSIVDGSNNHLDELSSLKA 189 (271)
Q Consensus 122 ~-------~f~~~d~~~~~~~~~----~~~~~GsTa~~~~i~~~~l~vanvGDSravl~~-~~~~~g~~~~~~~~~~~~~ 189 (271)
+ .|..+++.+.+.... ....+|||++++++.++++|+|||||||+|+++ ++ ++
T Consensus 453 ~~~~~L~~ai~~AN~~I~~~~~~~~~~~~~~MGTTlv~alI~~~~l~ianVGDSRaYli~r~g---------------~l 517 (645)
T PRK14559 453 PDEETIREAIYLANEAIYDLNQQNARSGSGRMGTTLVMALVQDTQVAVAHVGDSRLYRVTRKG---------------GL 517 (645)
T ss_pred cHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCceeeeEEEECCEEEEEEecCceEEEEecCC---------------eE
Confidence 1 166667777654322 234589999999999999999999999999874 56 99
Q ss_pred EecCCCCCCCCHhHHHHHHHcCCEEeeC--CcccCceeccccccccCCccCceEEEEEEEeCCCCeEEEEecCchH
Q 024204 190 IVVTRVHKAIYPQERARIQKSGGTVSSN--GRLQGRLEVSRAFGDRQFKKGHCISFYSATKSIRNIFILLCLATFE 263 (271)
Q Consensus 190 ~~LT~dH~~~~~~E~~RI~~~gg~v~~~--~r~~g~l~vtRalGd~~~k~~~vi~i~~~~l~~~d~flila~Gl~d 263 (271)
.+||+||++... +.+.| +... ...++..++|||||+...+.. ...+..+++.++|.||||+|||||
T Consensus 518 ~QLT~DHs~~~~-----lv~~G--i~~~~a~~~p~~~~LTrALG~~~~~~l-~Pdi~~~~L~~gD~lLLCSDGL~D 585 (645)
T PRK14559 518 EQLTVDHEVGQR-----EIQRG--VEPQIAYARPDAYQLTQALGPRDNSAI-QPDIQFLEIEEDTLLLLCSDGLSD 585 (645)
T ss_pred EEeCCCCCHHHH-----HHHhC--CCHHHHhcCcccceeeeccCCCCCCcc-cceEEEEEcCCCCEEEEECCCCCC
Confidence 999999998643 22233 1110 012456799999998665432 233778899998888888889998
No 12
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms]
Probab=99.92 E-value=6.9e-25 Score=193.96 Aligned_cols=165 Identities=25% Similarity=0.392 Sum_probs=129.9
Q ss_pred CCCceeEEEEEcCCCChHHHHHHHHHHHHHHHHccCc------------h------------------------------
Q 024204 86 PNLRCAHFAIFDGHGGRLAAEYAQKRLHANVISAGLP------------R------------------------------ 123 (271)
Q Consensus 86 ~~~~~~lfgVfDGHgG~~as~~a~~~l~~~l~~~~~~------------~------------------------------ 123 (271)
..-++++|.+||||.|+.+|-.|++.++..+..+... .
T Consensus 140 ~~~~~~~~slfdghags~~avvAsrll~~hI~~ql~~vvd~i~~~~~~~~~~~g~~~~~s~~s~~~~~~~~ek~Ir~E~L 219 (493)
T KOG1323|consen 140 PRADGALFSLFDGHAGSAVAVVASRLLHRHIKEQLCEVVDTILHMDRHENLNFGKHRSESSYSMSEMSREDEKRIRHEHL 219 (493)
T ss_pred CCCcceeeeeecCCCcchHHHHHHHHHHHhhhHHHHHHHHHHhhhccccccccccccccCCcccccccchhhccCchHHh
Confidence 3346899999999999999999998888777432110 0
Q ss_pred --------HHHHHHHHHHhhhcCCCCCCCeEEEEEEeCCeEEEEEeCcceEEEEeeccCCCCCCCccccCceeEEecCCC
Q 024204 124 --------FRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRV 195 (271)
Q Consensus 124 --------f~~~d~~~~~~~~~~~~~~GsTa~~~~i~~~~l~vanvGDSravl~~~~~~~g~~~~~~~~~~~~~~~LT~d 195 (271)
|+.+|+.+...........||||++++..-.++|+||.|||||+|.|++ ++.+|+.+
T Consensus 220 ViGAlEsAFqemDeqiarer~~~~~~GGCtalvvi~llGKlYvaNAGDsRAIlVrnd---------------eirplS~e 284 (493)
T KOG1323|consen 220 VIGALESAFQEMDEQIARERQVWRLPGGCTALVVIVLLGKLYVANAGDSRAILVRND---------------EIRPLSKE 284 (493)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhcCCCCceEEEeeeeccceEEccCCCceEEEEecC---------------Ceeecccc
Confidence 8999999888777777788999999999999999999999999999999 99999999
Q ss_pred CCCCCHhHHHHHHHcC--------CEEe----------------------------------------------eCCccc
Q 024204 196 HKAIYPQERARIQKSG--------GTVS----------------------------------------------SNGRLQ 221 (271)
Q Consensus 196 H~~~~~~E~~RI~~~g--------g~v~----------------------------------------------~~~r~~ 221 (271)
.+|. .||+||+..+ +.+. .+.|+.
T Consensus 285 fTPe--tERqRlQ~Laf~~PeLlgneFtrLEfprRl~~~dLgqrvLyRD~~MtGWayKtve~~DLr~pLI~gegrkaRll 362 (493)
T KOG1323|consen 285 FTPE--TERQRLQELAFRNPELLGNEFTRLEFPRRLTIKDLGQRVLYRDWNMTGWAYKTVEEEDLRFPLISGEGRKARLL 362 (493)
T ss_pred cCcH--HHHHHHHHHhhcChHhhcccccceecccccChhhhcceeeeeccccccceeehhhhhcCCcceecccchhhhhh
Confidence 9995 8999998864 1111 012566
Q ss_pred CceeccccccccCCccCc--------eEE---EEEEEeCC----CCeEEEEec-CchHHhhh
Q 024204 222 GRLEVSRAFGDRQFKKGH--------CIS---FYSATKSI----RNIFILLCL-ATFELLVR 267 (271)
Q Consensus 222 g~l~vtRalGd~~~k~~~--------vi~---i~~~~l~~----~d~flila~-Gl~d~l~d 267 (271)
+.+.|||.|||..+|... +.+ |+.++|.. .|+.+|+|+ ||||+++|
T Consensus 363 ~TigVsRGlGDH~Lkv~dsnl~iKPFLssvPeV~V~dl~q~e~~~DdVvilatDGLWDVlSn 424 (493)
T KOG1323|consen 363 ATIGVSRGLGDHHLKVVDSNLSIKPFLSSVPEVRVYDLRQYEHLTDDVVILATDGLWDVLSN 424 (493)
T ss_pred hhheeccccCcceeeeecCCcccchhhhcCCeeEEEehhhhccCCCcEEEEecCchhhhccc
Confidence 779999999999887541 122 66666653 345777777 99999998
No 13
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.68 E-value=7.9e-17 Score=158.87 Aligned_cols=190 Identities=21% Similarity=0.246 Sum_probs=154.1
Q ss_pred ceeeEEEEEeccCCCCCCCCceEEEecCCCCCCCCCCceeEEEEEcCCCChHHHHHHHHHHHHHHHHccCc---------
Q 024204 52 DFVEIEADAAEDKGSRHTMEDASVVLVDASSDSPPNLRCAHFAIFDGHGGRLAAEYAQKRLHANVISAGLP--------- 122 (271)
Q Consensus 52 ~~~~~~~g~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~lfgVfDGHgG~~as~~a~~~l~~~l~~~~~~--------- 122 (271)
..+-+.+|++...|.|.++.=+...+.++. . ...+.||.|||-+...+..++...+.+++..+...
T Consensus 518 n~~~~t~Gv~~~~gqrnk~c~~~~~v~nf~----~-~~~a~~g~~dgs~n~~v~~~vq~~ma~~L~eev~~~~~et~~mr 592 (1081)
T KOG0618|consen 518 NAFLWTYGVAGVSGQRNKVCSRAVWVENFF----L-NPQATFGCFDGSRNSRVLSLVQDTMASYLAEEVQLYGNETEQMR 592 (1081)
T ss_pred ceeheeeccchhcccccchhhhhhhhhhcc----c-CCcceEEEEcCCCchhHHHHHHHHHHHHHHHHHHhccChHHHHH
Confidence 445677999999999988887776666542 1 23468999999999999999999999988765211
Q ss_pred -hHHHHHHHHHHhhhcCCCCCCCeEEEEEEeCC--------eEEEEEeCcceEEEEeeccCCCCCCCccccCceeEEecC
Q 024204 123 -RFRKTDESLLQESVSGGWQDGATAVCIWILGR--------TVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVT 193 (271)
Q Consensus 123 -~f~~~d~~~~~~~~~~~~~~GsTa~~~~i~~~--------~l~vanvGDSravl~~~~~~~g~~~~~~~~~~~~~~~LT 193 (271)
.|...++++-. .+...|..++.+.|..+ ++.+||+|+|.+++|+.+ +..++|
T Consensus 593 ~~fl~~~rklg~----~g~~lg~~~~~~~i~~d~~~~asS~~l~~Anvg~c~avls~ng---------------~~~p~t 653 (1081)
T KOG0618|consen 593 NTFLRLNRKLGE----EGQVLGGSVVLCQIVEDSLSPASSKTLFAANVGTCMAVLSRNG---------------KPLPTT 653 (1081)
T ss_pred HHHHHHhhhhhh----hhccccchhhheeecccccCcccchhhhHhhhccchhhhhhcC---------------CcCccc
Confidence 15565655532 33345677777777643 789999999999999999 778887
Q ss_pred CCC-CCCCHhHHHHHHHcCCEEeeCCcccCceeccccccccCCccCceEE---EEEEEeCCCCeEEEEec-CchHHhh
Q 024204 194 RVH-KAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKGHCIS---FYSATKSIRNIFILLCL-ATFELLV 266 (271)
Q Consensus 194 ~dH-~~~~~~E~~RI~~~gg~v~~~~r~~g~l~vtRalGd~~~k~~~vi~---i~~~~l~~~d~flila~-Gl~d~l~ 266 (271)
+-. ...+++|.+||+..+|+|..+++++|....||++|.+.+.++ |.+ |....|++.|+|||+|+ ++|++|+
T Consensus 654 ~~~~~~v~~eE~~RI~~~~g~i~ed~k~ngvt~~tR~iG~~~l~P~-v~p~Phv~~~~Lt~qdE~LIvgn~~lW~~Ls 730 (1081)
T KOG0618|consen 654 RSPMLEVDREEYKRIVDSKGFITEDNKLNGVTSSTRAIGPFSLFPH-VLPDPHVSVVILTEQDEFLIVGNKQLWSVLS 730 (1081)
T ss_pred ccccccCCHHHHHHHHHhcCeecCCCeeeceeeeeeeccccccccc-ccCCCceeeEecccCceEEEEcchHHhhhcc
Confidence 665 456999999999999999999999999999999999988885 555 99999999999999999 9999986
No 14
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B ....
Probab=99.67 E-value=1.1e-15 Score=131.09 Aligned_cols=159 Identities=19% Similarity=0.190 Sum_probs=88.7
Q ss_pred eccCCCCCCCCceEEEecCCCCCCCCCCceeEEEEEcCCCChHH----HHHHHHHHHHHHHHccCch--------HHHHH
Q 024204 61 AEDKGSRHTMEDASVVLVDASSDSPPNLRCAHFAIFDGHGGRLA----AEYAQKRLHANVISAGLPR--------FRKTD 128 (271)
Q Consensus 61 ~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~lfgVfDGHgG~~a----s~~a~~~l~~~l~~~~~~~--------f~~~d 128 (271)
.+++|.|..|||++.+... ....+++|+||+||... |..+.+.+.+.+.+..... +..+.
T Consensus 3 ~sh~~~~~~nqD~~~~~~~--------~~~~~~aVaDG~g~~~~~~~aa~~av~~~~~~l~~~~~~~~~~~~~~~~~~~~ 74 (212)
T PF13672_consen 3 RSHRGRGAPNQDAFGIRTD--------DDGNLAAVADGVGGSPYGEEAAQLAVETFINYLKKLLSQESPSSIEALIRAIK 74 (212)
T ss_dssp ----TTSSS--EEEEEE-T--------CCTCEEEEEEEESTTTHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHH
T ss_pred ccccCCCCCCCCCEEeeeC--------CCCEEEEEEECCCCCchhHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHH
Confidence 4789999999999996532 13356799999996554 5555555555555443221 23333
Q ss_pred HHHHHh---------hhcCCCCCCCeEEEEEEeCCeEEEEEeCcceEEE-EeeccCCCCCCCccccCceeEEecCCCCCC
Q 024204 129 ESLLQE---------SVSGGWQDGATAVCIWILGRTVFVANIGDAKAVV-ARSSIVDGSNNHLDELSSLKAIVVTRVHKA 198 (271)
Q Consensus 129 ~~~~~~---------~~~~~~~~GsTa~~~~i~~~~l~vanvGDSravl-~~~~~~~g~~~~~~~~~~~~~~~LT~dH~~ 198 (271)
+.+... ........+||++++++.+++++++|+||||+|+ .+.+ .+..++.+|+.
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~tTl~~~v~~~~~~~~~~iGD~~i~~~~~~g---------------~~~~l~~~~~~ 139 (212)
T PF13672_consen 75 KEILSIVRAFQSAKQADLELRDYGTTLLALVIDPDKVYIFNIGDSRIYVIRRNG---------------EIQQLTDDHSG 139 (212)
T ss_dssp HHHHHHH----HHHHHSGGGTT-EE-EEEEEEETTEEEEEEESS-EEEEEEETT---------------EEEE-S---BH
T ss_pred HHHHHHhhhhhhhhhccccccccCceEEEEEEECCEEEEEEECCCeEEEEECCC---------------EEEEcCCCccc
Confidence 333311 1223334589999999999999999999999965 4566 89999999962
Q ss_pred CCHhHHHHHHHcCCEEeeCCcccCceeccccccccCCccCceEEEEEEEeCCCCeEEEEecCchHHhhh
Q 024204 199 IYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKGHCISFYSATKSIRNIFILLCLATFELLVR 267 (271)
Q Consensus 199 ~~~~E~~RI~~~gg~v~~~~r~~g~l~vtRalGd~~~k~~~vi~i~~~~l~~~d~flila~Gl~d~l~d 267 (271)
+.. ..++.+.... +..-..+..+++.++|.|||++||+|+.+.+
T Consensus 140 ----~~~-------------------~~~~~~~~~~--~~~~~~~~~~~~~~~d~ilL~SDG~~~~l~~ 183 (212)
T PF13672_consen 140 ----EYP-------------------NQTRSLTGDD--PEPDVQYGSIPLEEGDVILLCSDGVWDNLRS 183 (212)
T ss_dssp ----HHH-------------------HCTTSCCHHC--CCTETEEEEEE--TT-EEEEE-HHHHTTS-H
T ss_pred ----hhh-------------------hhhhccCccc--cccCCeEEEEEcCCCCEEEEECcCccccCCC
Confidence 111 1133333321 1111236667788999999999999988763
No 15
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases.
Probab=99.47 E-value=1.9e-12 Score=109.24 Aligned_cols=143 Identities=16% Similarity=0.042 Sum_probs=98.3
Q ss_pred CCCCCceEEEecCCCCCCCCCCceeEEEEEcCCCChHHHHHHHHHHHHHHHHccCc----h--HHHHHHHHHHhhhcCCC
Q 024204 67 RHTMEDASVVLVDASSDSPPNLRCAHFAIFDGHGGRLAAEYAQKRLHANVISAGLP----R--FRKTDESLLQESVSGGW 140 (271)
Q Consensus 67 R~~nED~~~~~~~~~~~~~~~~~~~lfgVfDGHgG~~as~~a~~~l~~~l~~~~~~----~--f~~~d~~~~~~~~~~~~ 140 (271)
....-|.+.+... .....+|+|+||||+...|.+++..+...+...... . +..+++.+... ...
T Consensus 14 ~~~~GD~~~~~~~-------~~~~~~~~v~Dg~G~G~~aa~~s~~~~~~~~~~~~~~~~~~~~l~~~n~~l~~~---~~~ 83 (193)
T smart00331 14 TQVGGDFYDVVKL-------PEGRLLIAIADVMGKGLAAALAMSMARSALRTLLSEGISLSQILERLNRAIYEN---GED 83 (193)
T ss_pred HhcCccEEEEEEe-------CCCeEEEEEEecCCCChHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHhc---CCC
Confidence 3455688766532 123578999999998888888887777777543211 1 55566555443 234
Q ss_pred CCCCeEEEEEE--eCCeEEEEEeCcceEEEEe-eccCCCCCCCccccCceeEEecCCCCCCCCHhHHHHHHHcCCEEeeC
Q 024204 141 QDGATAVCIWI--LGRTVFVANIGDAKAVVAR-SSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTVSSN 217 (271)
Q Consensus 141 ~~GsTa~~~~i--~~~~l~vanvGDSravl~~-~~~~~g~~~~~~~~~~~~~~~LT~dH~~~~~~E~~RI~~~gg~v~~~ 217 (271)
..|+|++++++ ..++++++|+||+|+++++ ++ ...+++.+
T Consensus 84 ~~~~T~~~~~id~~~~~l~~~~~Gd~~~~~~~~~~---------------~~~~~~~~---------------------- 126 (193)
T smart00331 84 GMFATLFLALYDFAGGTLSYANAGHSPPYLLRADG---------------GLVEDLDD---------------------- 126 (193)
T ss_pred CcEEEEEEEEEECCCCEEEEEeCCCCceEEEECCC---------------CeEEEcCC----------------------
Confidence 57999999988 6789999999999999998 44 33334433
Q ss_pred CcccCceeccccccccCCccCceEEEEEEEeCCCCeEEEEecCchHHhhh
Q 024204 218 GRLQGRLEVSRAFGDRQFKKGHCISFYSATKSIRNIFILLCLATFELLVR 267 (271)
Q Consensus 218 ~r~~g~l~vtRalGd~~~k~~~vi~i~~~~l~~~d~flila~Gl~d~l~d 267 (271)
.++.+|...-.+ ..+..+++.++|.+++++||+||.+..
T Consensus 127 --------~~~~lG~~~~~~---~~~~~~~l~~gd~l~l~TDGl~e~~~~ 165 (193)
T smart00331 127 --------LGAPLGLEPDVE---VDVRELTLEPGDLLLLYTDGLTEARNP 165 (193)
T ss_pred --------CCceeeeCCCCc---ceeEEEeeCCCCEEEEECCCccccCCh
Confidence 345667433111 225677999999999999999998653
No 16
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=99.29 E-value=1e-10 Score=104.07 Aligned_cols=155 Identities=17% Similarity=0.141 Sum_probs=95.8
Q ss_pred CCCCceEEEecCCCCCCCCCCceeEEEEEcCCC-----ChHHHHHHHHHHHHHHH---Hc-cCc-h-HHHHHHHHHHhhh
Q 024204 68 HTMEDASVVLVDASSDSPPNLRCAHFAIFDGHG-----GRLAAEYAQKRLHANVI---SA-GLP-R-FRKTDESLLQESV 136 (271)
Q Consensus 68 ~~nED~~~~~~~~~~~~~~~~~~~lfgVfDGHg-----G~~as~~a~~~l~~~l~---~~-~~~-~-f~~~d~~~~~~~~ 136 (271)
+.-||++++..+ ....+.||+||.| |-..+.|.++.+.+.-. .. ..+ . -.-++..+.+...
T Consensus 89 ~~GEDa~Fvss~--------~~~~v~GVADGVGGWa~~GiDpg~fS~eLM~~ce~~v~~~~~~~~~P~~lL~~ay~~l~~ 160 (330)
T KOG1379|consen 89 KGGEDAWFVSSN--------PHAIVMGVADGVGGWAEYGIDPGAFSRELMSNCERLVQNSDFNPSDPVNLLEKAYAELKS 160 (330)
T ss_pred CCCCcceeeccC--------cccceEEEccccchHhhcCcCHHHHHHHHHHHHHHHhcccccCCCChHHHHHHHHHHHhh
Confidence 446999999753 2346799999999 67777776665543322 11 111 1 2233333433222
Q ss_pred cC-CCCCCCeEEEEEEe--CCeEEEEEeCcceEEEEeeccCCCCCCCccccCceeEEecCCCCCCCCHhHHHHHHHcCCE
Q 024204 137 SG-GWQDGATAVCIWIL--GRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGT 213 (271)
Q Consensus 137 ~~-~~~~GsTa~~~~i~--~~~l~vanvGDSravl~~~~~~~g~~~~~~~~~~~~~~~LT~dH~~~~~~E~~RI~~~gg~ 213 (271)
.. ..-.+|||+++.+. +.+||+||+|||-..+.|.| +++.-|..... ++
T Consensus 161 ~~~~~vGSSTAcI~~l~~~~~~Lh~aNLGDSGF~VvR~G---------------~vv~~S~~Q~H-------------~F 212 (330)
T KOG1379|consen 161 QKVPIVGSSTACILALDRENGKLHTANLGDSGFLVVREG---------------KVVFRSPEQQH-------------YF 212 (330)
T ss_pred cCCCCCCcceeeeeeeecCCCeEEEeeccCcceEEEECC---------------EEEEcCchhee-------------cc
Confidence 22 23357889988888 78999999999999999999 88777754321 11
Q ss_pred EeeCCcccCceec-----cccccccCCccCceEEEEEEEeCCCCeEEEEecCchHHhhh
Q 024204 214 VSSNGRLQGRLEV-----SRAFGDRQFKKGHCISFYSATKSIRNIFILLCLATFELLVR 267 (271)
Q Consensus 214 v~~~~r~~g~l~v-----tRalGd~~~k~~~vi~i~~~~l~~~d~flila~Gl~d~l~d 267 (271)
-.| -.|.+ .-.++| .+..-....+++.++|-.|+.+|||||.|.+
T Consensus 213 N~P-----yQLs~~p~~~~~~~~d----~p~~ad~~~~~v~~GDvIilATDGlfDNl~e 262 (330)
T KOG1379|consen 213 NTP-----YQLSSPPEGYSSYISD----VPDSADVTSFDVQKGDVIILATDGLFDNLPE 262 (330)
T ss_pred CCc-----eeeccCCccccccccC----CccccceEEEeccCCCEEEEecccccccccH
Confidence 111 11111 112333 1111118889999998776666799998876
No 17
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=98.55 E-value=1.6e-06 Score=87.97 Aligned_cols=153 Identities=14% Similarity=0.080 Sum_probs=96.8
Q ss_pred eeEEEEEec-cCCCCCCCCceEEEecCCCCCCCCCCceeEEEEEcCCC-ChHHHHHHHHHHHHHH---HHccCc-h--HH
Q 024204 54 VEIEADAAE-DKGSRHTMEDASVVLVDASSDSPPNLRCAHFAIFDGHG-GRLAAEYAQKRLHANV---ISAGLP-R--FR 125 (271)
Q Consensus 54 ~~~~~g~~s-~~G~R~~nED~~~~~~~~~~~~~~~~~~~lfgVfDGHg-G~~as~~a~~~l~~~l---~~~~~~-~--f~ 125 (271)
+.+.+|.+. .++.+..+.|.+.+... .+...+++|+||.| |..|+ .++....+.+ .....+ . ..
T Consensus 550 ~~~~~g~a~~~k~g~~vsGD~y~~~~l-------~~g~~~~~laDGmGhG~~Aa-~~S~~~~~ll~~~~~~g~~~~~ai~ 621 (764)
T TIGR02865 550 YHVSTGVARAAKDGELVSGDSYSFGKL-------SAGKYAVAISDGMGSGPEAA-QESSACVRLLEKFLESGFDREVAIK 621 (764)
T ss_pred eeehhhHHHhcCCCCcccCceEEEEEE-------CCCEEEEEEEcccCCCHHHH-HHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 445555553 35567889999877531 12336799999999 44444 3343333333 222222 1 55
Q ss_pred HHHHHHHHhhhcCCCCCCCeEEEEEEe--CCeEEEEEeCcceEEEEeeccCCCCCCCccccCceeEEecCCCCCCCCHhH
Q 024204 126 KTDESLLQESVSGGWQDGATAVCIWIL--GRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQE 203 (271)
Q Consensus 126 ~~d~~~~~~~~~~~~~~GsTa~~~~i~--~~~l~vanvGDSravl~~~~~~~g~~~~~~~~~~~~~~~LT~dH~~~~~~E 203 (271)
.++..+... ......+|+.+++++ .+++.++|+|+++.++.|++ .+.+++..+-|
T Consensus 622 ~lN~~L~~~---~~~~~faTl~l~~IDl~~g~~~~~~aG~~p~~i~r~~---------------~v~~i~s~~lP----- 678 (764)
T TIGR02865 622 TVNSILSLR---STDEKFSTLDLSVIDLYTGQAEFVKVGAVPSFIKRGA---------------KVEVIRSSNLP----- 678 (764)
T ss_pred HHHHHHHhC---CCCCeEEEEEEEEEECCCCeEEEEecCCCceEEEECC---------------EEEEecCCCce-----
Confidence 555554332 223457999888885 57899999999999998887 78777654332
Q ss_pred HHHHHHcCCEEeeCCcccCceeccccccccCCccCceEEEEEEEeCCCCeEEEEecCchHHhh
Q 024204 204 RARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKGHCISFYSATKSIRNIFILLCLATFELLV 266 (271)
Q Consensus 204 ~~RI~~~gg~v~~~~r~~g~l~vtRalGd~~~k~~~vi~i~~~~l~~~d~flila~Gl~d~l~ 266 (271)
+|-. +.. ...+...++.++|.+++++||+||...
T Consensus 679 --------------------------lGil--~~~-~~~~~~~~L~~GD~Lll~SDGv~E~~~ 712 (764)
T TIGR02865 679 --------------------------IGIL--DEV-DVELVRKKLKNGDLIVMVSDGVLEGEK 712 (764)
T ss_pred --------------------------eEec--cCC-ccceEEEEeCCCCEEEEECCCCCcCCc
Confidence 2210 111 122567799999999999999998754
No 18
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 3KE6_B 3ZT9_A 3RNR_A 3EQ2_A 3F7A_B 3F79_A 3ES2_B 3PU9_B 3T91_B 3T9Q_B ....
Probab=98.22 E-value=4.9e-05 Score=63.65 Aligned_cols=127 Identities=16% Similarity=0.085 Sum_probs=74.2
Q ss_pred eeEEEEEcCCCChHHHHHHHHHHHHHH---HHc-cCch--HHHHHHHHHHhhhcCCCCCCCeEEEEEEe--CCeEEEEEe
Q 024204 90 CAHFAIFDGHGGRLAAEYAQKRLHANV---ISA-GLPR--FRKTDESLLQESVSGGWQDGATAVCIWIL--GRTVFVANI 161 (271)
Q Consensus 90 ~~lfgVfDGHgG~~as~~a~~~l~~~l---~~~-~~~~--f~~~d~~~~~~~~~~~~~~GsTa~~~~i~--~~~l~vanv 161 (271)
..++.|+|+.|-...|.+.+..+...+ ... ..+. ...+++.+....... ...+|++++++. .++++++|+
T Consensus 4 ~~~~~v~D~~GhG~~aa~~~~~~~~~~~~~~~~~~~p~~~l~~ln~~l~~~~~~~--~~~~t~~~~~~d~~~~~l~~~~a 81 (193)
T PF07228_consen 4 RYFIIVGDVSGHGVSAALLSAALASAIRELLDEGLDPEELLEALNRRLYRDLKGD--NRYATACYAIIDPETGTLTYANA 81 (193)
T ss_dssp EEEEEEEEESSSSHHHHHHHHHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHTTTT--STTEEEEEEEEETTTTEEEEEEE
T ss_pred EEEEEEEEecCCCHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhhc--cccceEEEEEecccceEEEEeCC
Confidence 467899998883333333333333333 222 2222 555565554433322 356888888765 568999999
Q ss_pred CcceEEEEeeccCCCCCCCccccCceeEEecCCCCCCCCHhHHHHHHHcCCEEeeCCcccCceeccccccccCCccCceE
Q 024204 162 GDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKGHCI 241 (271)
Q Consensus 162 GDSravl~~~~~~~g~~~~~~~~~~~~~~~LT~dH~~~~~~E~~RI~~~gg~v~~~~r~~g~l~vtRalGd~~~k~~~vi 241 (271)
|++++++++.+. + ....+..... .||-.. . ...
T Consensus 82 G~~~~l~~~~~~--~-----------~~~~~~~~~~-------------------------------~lG~~~--~-~~~ 114 (193)
T PF07228_consen 82 GHPPPLLLRPGG--R-----------EIEQLESEGP-------------------------------PLGIFE--D-IDY 114 (193)
T ss_dssp SSSEEEEEETTC--T-----------EEEEETCSSB-------------------------------BCSSSC--T-TCE
T ss_pred CCCCEEEEeccc--c-----------ceeecccCcc-------------------------------ceeeec--c-ccc
Confidence 999999999950 0 3333322111 134211 1 123
Q ss_pred EEEEEEeCCCCeEEEEecCchHHh
Q 024204 242 SFYSATKSIRNIFILLCLATFELL 265 (271)
Q Consensus 242 ~i~~~~l~~~d~flila~Gl~d~l 265 (271)
....+++.++|.+++++|||+|..
T Consensus 115 ~~~~~~l~~gd~l~l~TDGl~e~~ 138 (193)
T PF07228_consen 115 QEQEIQLEPGDRLLLYTDGLFEAL 138 (193)
T ss_dssp EEEEEE--TTEEEEEECHHHCTTT
T ss_pred cceEEEeccccEEEEeCCChhhcc
Confidence 367889999999999999999886
No 19
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription]
Probab=85.89 E-value=22 Score=32.90 Aligned_cols=123 Identities=15% Similarity=0.031 Sum_probs=69.0
Q ss_pred ceeEEEEEcCCC-ChHHHHHHHHHHH---HHHHHc--cCch--HHHHHHHHHHhhhcCCCCCCCeEEEEEEe--CCeEEE
Q 024204 89 RCAHFAIFDGHG-GRLAAEYAQKRLH---ANVISA--GLPR--FRKTDESLLQESVSGGWQDGATAVCIWIL--GRTVFV 158 (271)
Q Consensus 89 ~~~lfgVfDGHg-G~~as~~a~~~l~---~~l~~~--~~~~--f~~~d~~~~~~~~~~~~~~GsTa~~~~i~--~~~l~v 158 (271)
....++|.|..| |-.+|-. ..... ..+... ..|. +..+++-+....... .=+|+...+++ ...+..
T Consensus 174 ~~~~i~I~DvsG~Gv~aal~-m~~~~~~~~~~~~~~~~~p~~~l~~~n~~~~~~~~~~---~f~T~~~~~~d~~~~~l~y 249 (367)
T COG2208 174 KRLRIGIGDVSGKGVPAALL-MLMPKLALRLLLESGPLDPADVLETLNRVLKQNLEED---MFVTLFLGVYDLDSGELTY 249 (367)
T ss_pred cEEEEEEEeccCCCHHHHHH-HHHHHHHHHHhhhcccCCHHHHHHHHHHHHHhcccCC---cEEEEEEEEEeccCCEEEE
Confidence 356789999777 5555444 21111 122222 1222 444444444322221 23566555554 568999
Q ss_pred EEeCcceEEEEeeccCCCCCCCccccCcee--EEecCCCCCCCCHhHHHHHHHcCCEEeeCCcccCceeccccccccCCc
Q 024204 159 ANIGDAKAVVARSSIVDGSNNHLDELSSLK--AIVVTRVHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFK 236 (271)
Q Consensus 159 anvGDSravl~~~~~~~g~~~~~~~~~~~~--~~~LT~dH~~~~~~E~~RI~~~gg~v~~~~r~~g~l~vtRalGd~~~k 236 (271)
+|+|---+++.+.+ + . +..|+ +...++|...--
T Consensus 250 ~~aGH~p~~i~~~~---~-----------~~~~~~l~-------------------------------~~g~piG~~~~~ 284 (367)
T COG2208 250 SNAGHEPALILSAD---G-----------EIEVEDLT-------------------------------ALGLPIGLLPDY 284 (367)
T ss_pred eeCCCCCeeEEEcC---C-----------CceeEEcc-------------------------------CCCceeeecCCc
Confidence 99999999988886 1 1 11111 344555632111
Q ss_pred cCceEEEEEEEeCCCCeEEEEecCchH
Q 024204 237 KGHCISFYSATKSIRNIFILLCLATFE 263 (271)
Q Consensus 237 ~~~vi~i~~~~l~~~d~flila~Gl~d 263 (271)
-..+...++.++|.+++.+||+.|
T Consensus 285 ---~~~~~~~~l~~gd~lvl~tDGv~E 308 (367)
T COG2208 285 ---QYEVASLQLEPGDLLVLYTDGVTE 308 (367)
T ss_pred ---cchheeEEecCCCEEEEEcCCeee
Confidence 111677888898888888889987
No 20
>PRK10693 response regulator of RpoS; Provisional
Probab=40.35 E-value=2.7e+02 Score=24.88 Aligned_cols=74 Identities=12% Similarity=0.143 Sum_probs=40.7
Q ss_pred EEEEEc--CCCCh--HHHHHHHHHHHHHHHHc----c----Cch--HHHHHHHHHHhhhcCCCCCCCeEEEEEEeC--Ce
Q 024204 92 HFAIFD--GHGGR--LAAEYAQKRLHANVISA----G----LPR--FRKTDESLLQESVSGGWQDGATAVCIWILG--RT 155 (271)
Q Consensus 92 lfgVfD--GHgG~--~as~~a~~~l~~~l~~~----~----~~~--f~~~d~~~~~~~~~~~~~~GsTa~~~~i~~--~~ 155 (271)
.|-++| ||||+ .||-.+...+...+... . .|. ...+++.+..... ..--|+...++.. ++
T Consensus 165 ~~~~~DvsGhg~hg~~aa~l~~~~~~~~~~~~~~~~~~~~~~p~~~l~~lN~~l~~~~~----~~~~t~~~~~~d~~~~~ 240 (303)
T PRK10693 165 AFYCLDVTRAGDNGVLAALLLRALFNGLLQEQLAHQNQRLPELGALLKQVNHLLRQANL----PGQFPLLVGYYHRELKN 240 (303)
T ss_pred EEEEEecCCCCcccHHHHHHHHHHHHHHHHHHhcccccccCCHHHHHHHHHHHHHhcCC----CceeeEEEEEEEcCCCe
Confidence 345555 99855 44444333333344331 1 122 4555555554311 1125777777764 57
Q ss_pred EEEEEeCcceEEEE
Q 024204 156 VFVANIGDAKAVVA 169 (271)
Q Consensus 156 l~vanvGDSravl~ 169 (271)
+..+|.|-...++.
T Consensus 241 l~~~~AGhp~~~~~ 254 (303)
T PRK10693 241 LILVSAGLNATLNT 254 (303)
T ss_pred EEEEeCCCCCEEec
Confidence 99999999998853
No 21
>PF05785 CNF1: Rho-activating domain of cytotoxic necrotizing factor; InterPro: IPR008430 This entry represents several bacterial cytotoxic necrotizing factor proteins as well as related dermonecrotic toxin (DNT) from Bordetella species. Cytotoxic necrotizing factor 1 (CNF1) is a toxin whose structure from Escherichia coli revealed a 4-layer alpha/beta/beta/alpha structure containing mixed beta-sheets []. CNF1 is expressed in strains of E. coli causing uropathogenic and neonatal meningitis. CNF1 alters host cell actin cytoskeleton and promotes bacterial invasion of the blood-brain barrier endothelial cells []. CNF1 belongs to a unique group of large cytotoxins that cause constitutive activation of Rho guanosine triphosphatases (GTPases), which are key regulators of the actin cytoskeleton []. Bordetella dermonecrotic toxin (DNT) stimulates the assembly of actin stress fibres and focal adhesions by deamidating or polyaminating Gln63 of the small GTPase Rho. DNT is an A-B toxin composed of an N-terminal receptor-binding (B) domain and a C-terminal enzymatically active (A) domain [].; PDB: 1HZG_A 1HQ0_A.
Probab=31.65 E-value=52 Score=29.56 Aligned_cols=26 Identities=15% Similarity=0.244 Sum_probs=19.3
Q ss_pred CCCCCCCeEEEEEEeCCeEEEEEeCcc
Q 024204 138 GGWQDGATAVCIWILGRTVFVANIGDA 164 (271)
Q Consensus 138 ~~~~~GsTa~~~~i~~~~l~vanvGDS 164 (271)
.+..+|||.+++ ++++.+|..|+|-+
T Consensus 128 sG~LSGCT~i~A-~K~~~~y~~HtGk~ 153 (281)
T PF05785_consen 128 SGALSGCTMIYA-RKDNYFYAYHTGKS 153 (281)
T ss_dssp ---BSS-EEEEE-EETTEEEEEEEEES
T ss_pred CCccCCCEEEEE-EcCCeEEEEEcCCC
Confidence 445689998876 78999999999987
No 22
>TIGR00067 glut_race glutamate racemase. The most closely related proteins differing in function are aspartate racemases.
Probab=21.54 E-value=42 Score=29.53 Aligned_cols=22 Identities=32% Similarity=0.533 Sum_probs=19.4
Q ss_pred EEEEc-CCCChHHHHHHHHHHHH
Q 024204 93 FAIFD-GHGGRLAAEYAQKRLHA 114 (271)
Q Consensus 93 fgVfD-GHgG~~as~~a~~~l~~ 114 (271)
.|||| |.||-.+.+.+.+.+++
T Consensus 1 IgvfDSGiGGltv~~~l~~~~p~ 23 (251)
T TIGR00067 1 IGVFDSGVGGLSVLKEIRKQLPK 23 (251)
T ss_pred CEEEeCCccHHHHHHHHHHHCCC
Confidence 48999 99999999999998864
Done!