BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024207
(271 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9STX2|VEP1_ARATH 3-oxo-Delta(4,5)-steroid 5-beta-reductase OS=Arabidopsis thaliana
GN=VEP1 PE=1 SV=1
Length = 388
Score = 385 bits (990), Expect = e-106, Method: Compositional matrix adjust.
Identities = 187/271 (69%), Positives = 217/271 (80%), Gaps = 4/271 (1%)
Query: 1 MFRNVLRSIIPNAPNLRHICLQTGGKHYLGPFDCIGKIPYDPPFTEDLPRLNIPLFYYNQ 60
M RNVL++IIP APNLRH+CLQTG KHYLGPF + +DPPFTED+PRL I FYY Q
Sbjct: 122 MLRNVLQAIIPYAPNLRHVCLQTGTKHYLGPFTNVDGPRHDPPFTEDMPRLQIQNFYYTQ 181
Query: 61 EDILFEEVEKREGLTWSIHRPFGIFGFSPYSLMNIIATLCMYAAICKHEGIPLLFPGTKE 120
EDILFEE++K E +TWSIHRP IFGFSPYSLMNI+ TLC+YAAICKHEG PLLFPG+K+
Sbjct: 182 EDILFEEIKKIETVTWSIHRPNMIFGFSPYSLMNIVGTLCVYAAICKHEGSPLLFPGSKK 241
Query: 121 TWEGFSEYSDADLIAEQQIWAAVDANARNEAFNCTNGDVFKWKHLWKALAEQFEIENYGF 180
WEGF SDADLIAEQQIWAAVD A+NEAFNC N D+FKWKHLWK LAEQF IE YGF
Sbjct: 242 AWEGFMTASDADLIAEQQIWAAVDPYAKNEAFNCNNADIFKWKHLWKILAEQFGIEEYGF 301
Query: 181 GDEKDSERMRLGEFMKGKESVWEEIVRENQLQPTKLNEVAVWSYADMGLNIGAGYLVSMN 240
+ K+ + L E MKGKE VWEE+V+ENQLQ KL EV VW +AD+ L + G + SMN
Sbjct: 302 EEGKN---LGLVEMMKGKERVWEEMVKENQLQEKKLEEVGVWWFADVILGV-EGMIDSMN 357
Query: 241 KSKEHGFLGFRNSKNSFVTWIGRLKSHRIVP 271
KSKE+GFLGFRNS NSF++WI + K+ +IVP
Sbjct: 358 KSKEYGFLGFRNSNNSFISWIDKYKAFKIVP 388
>sp|Q6PQJ9|5BPOR_DIGLA 3-oxo-Delta(4,5)-steroid 5-beta-reductase OS=Digitalis lanata PE=1
SV=1
Length = 389
Score = 363 bits (932), Expect = e-100, Method: Compositional matrix adjust.
Identities = 174/272 (63%), Positives = 213/272 (78%), Gaps = 5/272 (1%)
Query: 1 MFRNVLRSIIPNAPNLRHICLQTGGKHYLGPFDCIGKI-PYDPPFTEDLPRLNIPLFYYN 59
MFRNVL ++IPN PNL+HI LQTG KHY+GPF+ GKI +DPP+TEDLPRL FYY+
Sbjct: 122 MFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIESHDPPYTEDLPRLKYMNFYYD 181
Query: 60 QEDILFEEVEKREGLTWSIHRPFGIFGFSPYSLMNIIATLCMYAAICKHEGIPLLFPGTK 119
EDI+ EEVEK+EGLTWS+HRP IFGFSPYS+MN++ TLC+YAAICKHEG L F G K
Sbjct: 182 LEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCK 241
Query: 120 ETWEGFSEYSDADLIAEQQIWAAVDANARNEAFNCTNGDVFKWKHLWKALAEQFEIENYG 179
W+G+S+ SDADLIAE IWAAVD A+NEAFN +NGDVFKWKH WK LAEQF + G
Sbjct: 242 AAWDGYSDCSDADLIAEHHIWAAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGV---G 298
Query: 180 FGDEKDSERMRLGEFMKGKESVWEEIVRENQLQPTKLNEVAVWSYADMGLNIGAGYLVSM 239
G+ ++ ++L + MKGKE VWEEIVREN L PTKL +V +W + D+ L +L SM
Sbjct: 299 CGEYEEGVDLKLQDLMKGKEPVWEEIVRENGLTPTKLKDVGIWWFGDVILG-NECFLDSM 357
Query: 240 NKSKEHGFLGFRNSKNSFVTWIGRLKSHRIVP 271
NKSKEHGFLGFRNSKN+F++WI + K+++IVP
Sbjct: 358 NKSKEHGFLGFRNSKNAFISWIDKAKAYKIVP 389
>sp|O74913|YJ72_SCHPO Uncharacterized protein C757.02c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPCC757.02c PE=4 SV=1
Length = 405
Score = 102 bits (254), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 132/309 (42%), Gaps = 43/309 (13%)
Query: 1 MFRNVLRSI-IPNAPNLRHICLQTGGKHY---LGPFDCIGKIPYDPPFTEDLPRLNIPLF 56
M RN ++++ + + LR + L TG K Y LG + I D E P F
Sbjct: 100 MLRNFVQALELTSIQTLRRVILTTGLKFYGLHLGEVR-LPMIETDIRVPETFS--GTPNF 156
Query: 57 YYNQEDILFEEVEKREGLTWSIHRPFGIFGFSPYSLMNIIATLCMYAAICKHEGIPLLFP 116
YY QEDIL +E + ++I P I G S S MN T+ +YA +C+ P FP
Sbjct: 157 YYVQEDIL-KEFSNGKKWDYTIAMPNDICGVSKGSYMNEAFTIALYALVCRELHEPFRFP 215
Query: 117 GTKETWEGFSEYSDADLIAEQQIWAAVDANARNEAFNCTNGDVFKWKHLWKALAEQFEIE 176
G ++ + GF + S + LIA+ Q+W A E FN NGD+ W W +AE F +E
Sbjct: 216 GNEKFYLGFDDISYSKLIADFQLWMTFKAECSEEKFNIVNGDIHSWSRTWPKIAEYFGVE 275
Query: 177 --------NYGFGDE------------------------KDSERMRLGEFMKGK--ESVW 202
++ E K ++ L +++K K + W
Sbjct: 276 VPKNQFATDFTLSTEVTLSTPSPINLYEKELGIKHTPNSKIINQISLQQWVKQKKVQDAW 335
Query: 203 EEIVRENQLQPTKLNEVAVWSYADMGLNIGAGYLVSMNKSKEHGFLGFRNSKNSFVTWIG 262
I +L L EV W++ D + SM+K+++ G+ + ++ + F
Sbjct: 336 RTIAEREKLNAHAL-EVGTWAFCDFLFGRTYNVISSMSKARKLGYTDYYDTFDGFKETFD 394
Query: 263 RLKSHRIVP 271
LK + +P
Sbjct: 395 ELKKQKQIP 403
>sp|Q80TB8|VAT1L_MOUSE Synaptic vesicle membrane protein VAT-1 homolog-like OS=Mus
musculus GN=Vat1l PE=2 SV=2
Length = 417
Score = 35.4 bits (80), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Query: 31 PFDCIGKIPYDPPFTEDLPRLNIPLFYYNQEDILFEEVEKREGLTWSIHRPFGIFGFSPY 90
P + + KIP D F+E P+ + +LFE REG++ +H G G +
Sbjct: 140 PVEFVYKIPDDMSFSEAAA---FPMNFVTAYTMLFEIANLREGMSVLVHSAGGGVGQAVA 196
Query: 91 SLMNIIATLCMY--AAICKHEGI 111
L + + + ++ A+ KHE I
Sbjct: 197 QLCSTVPNVTVFGTASTFKHEAI 219
>sp|Q9HCJ6|VAT1L_HUMAN Synaptic vesicle membrane protein VAT-1 homolog-like OS=Homo
sapiens GN=VAT1L PE=1 SV=2
Length = 419
Score = 34.7 bits (78), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Query: 31 PFDCIGKIPYDPPFTEDLPRLNIPLFYYNQEDILFEEVEKREGLTWSIHRPFGIFGFSPY 90
P + + KIP D F+E P+ + +LFE REG++ +H G G +
Sbjct: 142 PVEFVYKIPDDMSFSEAAA---FPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVA 198
Query: 91 SLMNIIATLCMY--AAICKHEGI 111
L + + + ++ A+ KHE I
Sbjct: 199 QLCSTVPNVTVFGTASTFKHEAI 221
>sp|B9E0C6|ADDB_CLOK1 ATP-dependent helicase/deoxyribonuclease subunit B OS=Clostridium
kluyveri (strain NBRC 12016) GN=addB PE=3 SV=1
Length = 1150
Score = 33.9 bits (76), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 31/54 (57%)
Query: 122 WEGFSEYSDADLIAEQQIWAAVDANARNEAFNCTNGDVFKWKHLWKALAEQFEI 175
++ ++Y++ D IA + A D N R + GD+ ++++L KA+ Q++I
Sbjct: 311 FKALNKYTEIDYIARDIVKACRDKNLRFKDMAVVTGDLDEYENLIKAVFNQYDI 364
>sp|Q13018|PLA2R_HUMAN Secretory phospholipase A2 receptor OS=Homo sapiens GN=PLA2R1 PE=1
SV=2
Length = 1463
Score = 32.0 bits (71), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 40/99 (40%), Gaps = 8/99 (8%)
Query: 165 LWKALAEQFEI-ENYGFGDEKDSERMRLGEFMKGKESVWEEIVRENQLQPTKLNEVAVWS 223
LW A ++E E +GF + S + G +++WE+ + + L WS
Sbjct: 202 LWCATTSRYERDEKWGFCPDPTSAEV-------GCDTIWEKDLNSHICYQFNLLSSLSWS 254
Query: 224 YADMGLNIGAGYLVSMNKSKEHGFLGFRNSKNSFVTWIG 262
A + G L+S+ E F+ S + W+G
Sbjct: 255 EAHSSCQMQGGTLLSITDETEENFIREHMSSKTVEVWMG 293
>sp|Q5R880|PLA2R_PONAB Secretory phospholipase A2 receptor OS=Pongo abelii GN=PLA2R1 PE=2
SV=2
Length = 1464
Score = 32.0 bits (71), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 40/99 (40%), Gaps = 8/99 (8%)
Query: 165 LWKALAEQFE-IENYGFGDEKDSERMRLGEFMKGKESVWEEIVRENQLQPTKLNEVAVWS 223
LW A ++E E +GF + S + G +++WE+ + + L WS
Sbjct: 204 LWCATTSRYERDEKWGFCPDPTSAEV-------GCDTIWEKDLNSHICYQFNLLSSLSWS 256
Query: 224 YADMGLNIGAGYLVSMNKSKEHGFLGFRNSKNSFVTWIG 262
A + G L+S+ E F+ S + W+G
Sbjct: 257 EAHSSCQMQGGALLSITDETEENFIREHMSSKTVEVWMG 295
>sp|Q1I2V7|ALR_PSEE4 Alanine racemase OS=Pseudomonas entomophila (strain L48) GN=alr
PE=3 SV=1
Length = 357
Score = 31.6 bits (70), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 52/133 (39%), Gaps = 6/133 (4%)
Query: 102 YAAICKHEGIPLLFPGTKE---TWEGFSEYSDADLIAEQQIWAAVDANARNEAFNCTNGD 158
+A C E + L G K EGF E S+ LIAE +W V + + EA T
Sbjct: 55 FAVACIEEALELRAAGIKAPVLLLEGFFEASELALIAEHDLWCVVHSLWQLEAIEQT--P 112
Query: 159 VFKWKHLWKALAEQFEIENYGFGDEKDSERMRLGEFMKGKESVWEEIVRENQLQPTKL-N 217
V K +W + D +D+ + L + + R ++L
Sbjct: 113 VRKPLTIWLKMDTGMHRVGVHPKDYQDAYQRLLASGKVSRIVLMSHFARADELDAAATEQ 172
Query: 218 EVAVWSYADMGLN 230
+VAV+ A GL+
Sbjct: 173 QVAVFEAARQGLS 185
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.139 0.447
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 114,560,927
Number of Sequences: 539616
Number of extensions: 5067850
Number of successful extensions: 9099
Number of sequences better than 100.0: 10
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 9088
Number of HSP's gapped (non-prelim): 11
length of query: 271
length of database: 191,569,459
effective HSP length: 116
effective length of query: 155
effective length of database: 128,974,003
effective search space: 19990970465
effective search space used: 19990970465
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)