Your job contains 1 sequence.
>024209
MSSRSRSISRSRSRSRSRSPRDRRFRSRHSSYCDPPLRRETRRSFSQGNLCNNCKRPGHF
ARECPNVAVCNNCGLPGHIASECTTQARCWNCREPGHMASNCHNEGICHSCGKTGHRARD
CSTHVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCRKTGHIARDCQNEPVCNLCNIAGH
VARQCPKGDSLGERGGGGGGERGGGGGGDGGGGGGRYVGYHDVICRSCNQMGHMSRDCVG
PLIICRNCGGRGHMAYECPSGRIADRGYRRY
The BLAST search returned 7 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 024209
(271 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2005719 - symbol:AT1G75560 species:3702 "Arabi... 770 2.4e-91 2
POMBASE|SPAC13D6.02c - symbol:byr3 "zinc finger protein B... 260 2.2e-27 2
SGD|S000005199 - symbol:GIS2 "Translational activator for... 302 7.3e-27 1
UNIPROTKB|F1N8C2 - symbol:CNBP "Cellular nucleic acid-bin... 258 4.0e-26 2
ASPGD|ASPL0000028407 - symbol:AN5111 species:162425 "Emer... 245 5.1e-26 2
UNIPROTKB|O42395 - symbol:CNBP "Cellular nucleic acid-bin... 256 1.3e-25 2
UNIPROTKB|B4DP17 - symbol:CNBP "cDNA FLJ61146, highly sim... 258 1.7e-25 2
UNIPROTKB|Q3T0Q6 - symbol:CNBP "Cellular nucleic acid-bin... 258 1.7e-25 2
UNIPROTKB|G3MZ41 - symbol:ZCCHC13 "Uncharacterized protei... 248 7.1e-25 2
UNIPROTKB|P62633 - symbol:CNBP "Cellular nucleic acid-bin... 258 1.5e-24 2
UNIPROTKB|Q4R501 - symbol:Q4R501 "Brain cDNA, clone: QnpA... 258 1.5e-24 2
UNIPROTKB|Q5R5R5 - symbol:CNBP "Cellular nucleic acid-bin... 258 1.5e-24 2
RGD|621807 - symbol:Cnbp "CCHC-type zinc finger, nucleic ... 258 1.5e-24 2
UNIPROTKB|P62634 - symbol:Cnbp "Cellular nucleic acid-bin... 258 1.5e-24 2
MGI|MGI:88431 - symbol:Cnbp "cellular nucleic acid bindin... 256 4.9e-24 2
UNIPROTKB|E2RPD7 - symbol:CNBP "Uncharacterized protein" ... 256 7.9e-24 2
UNIPROTKB|F8WFK2 - symbol:Cnbp "Cellular nucleic acid-bin... 256 7.9e-24 2
CGD|CAL0002417 - symbol:GIS2 species:5476 "Candida albica... 223 1.0e-23 2
UNIPROTKB|Q59YJ9 - symbol:GIS2 "Putative uncharacterized ... 223 1.0e-23 2
ASPGD|ASPL0000040986 - symbol:AN9093 species:162425 "Emer... 239 1.6e-23 2
ZFIN|ZDB-GENE-030131-7782 - symbol:cnbpb "CCHC-type zinc ... 249 2.6e-23 2
UNIPROTKB|G4N4A8 - symbol:MGG_05948 "Zinc knuckle domain-... 220 6.4e-23 3
ZFIN|ZDB-GENE-030131-5045 - symbol:cnbpa "CCHC-type zinc ... 240 1.1e-22 2
UNIPROTKB|J9NRQ2 - symbol:ZCCHC13 "Uncharacterized protei... 256 5.5e-22 1
UNIPROTKB|G4MRA3 - symbol:MGG_13778 "Zinc finger protein ... 176 2.2e-20 2
UNIPROTKB|Q8WW36 - symbol:ZCCHC13 "Zinc finger CCHC domai... 231 2.5e-19 1
TAIR|locus:2135139 - symbol:CSDP1 "cold shock domain prot... 198 2.5e-18 2
UNIPROTKB|F1NI84 - symbol:CNBP "Cellular nucleic acid-bin... 221 2.8e-18 1
DICTYBASE|DDB_G0293328 - symbol:DDB_G0293328 "Cellular nu... 149 1.8e-16 2
TAIR|locus:2827810 - symbol:CSP3 "cold shock domain prote... 160 3.1e-16 2
FB|FBgn0034802 - symbol:CG3800 species:7227 "Drosophila m... 200 4.7e-16 1
ZFIN|ZDB-GENE-030102-2 - symbol:zcchc7 "zinc finger, CCHC... 198 8.3e-15 1
WB|WBGene00001601 - symbol:glh-4 species:6239 "Caenorhabd... 196 3.3e-14 1
WB|WBGene00019537 - symbol:K08D12.3 species:6239 "Caenorh... 182 3.8e-14 1
TAIR|locus:2078526 - symbol:AT3G42860 species:3702 "Arabi... 176 6.6e-13 1
TAIR|locus:2079859 - symbol:AT3G43590 species:3702 "Arabi... 148 7.6e-13 2
POMBASE|SPBP35G2.08c - symbol:air1 "zinc knuckle TRAMP co... 172 1.1e-12 1
WB|WBGene00001598 - symbol:glh-1 species:6239 "Caenorhabd... 161 1.0e-10 1
UNIPROTKB|P34689 - symbol:glh-1 "ATP-dependent RNA helica... 161 1.0e-10 1
UNIPROTKB|Q65XV7 - symbol:P0016H04.11 "Os05g0111000 prote... 159 2.3e-10 1
CGD|CAL0005378 - symbol:orf19.4844 species:5476 "Candida ... 140 4.2e-10 2
SGD|S000001341 - symbol:AIR1 "Zinc knuckle protein" speci... 155 6.2e-10 1
WB|WBGene00001599 - symbol:glh-2 species:6239 "Caenorhabd... 151 6.4e-09 3
UNIPROTKB|Q966L9 - symbol:glh-2 "ATP-dependent RNA helica... 151 6.4e-09 3
TAIR|locus:2156647 - symbol:AT5G52380 species:3702 "Arabi... 145 1.3e-08 1
POMBASE|SPAC683.02c - symbol:SPAC683.02c "zf-CCHC type zi... 141 1.6e-08 1
SGD|S000002334 - symbol:AIR2 "RNA-binding subunit of the ... 144 3.6e-08 1
WB|WBGene00017210 - symbol:F07E5.5 species:6239 "Caenorha... 144 4.6e-08 1
UNIPROTKB|G4MQ81 - symbol:MGG_09256 "Uncharacterized prot... 136 1.4e-06 1
UNIPROTKB|F1PQG8 - symbol:ZCCHC3 "Uncharacterized protein... 130 1.5e-06 1
UNIPROTKB|J9P281 - symbol:ZCCHC3 "Uncharacterized protein... 130 1.6e-06 1
ZFIN|ZDB-GENE-031030-9 - symbol:zcchc9 "zinc finger, CCHC... 128 2.1e-06 1
RGD|735084 - symbol:Megf10 "multiple EGF-like domains 10"... 125 2.9e-06 1
UNIPROTKB|F1S7I8 - symbol:ZCCHC3 "Uncharacterized protein... 130 3.3e-06 1
UNIPROTKB|A1A4J3 - symbol:ZCCHC3 "Zinc finger, CCHC domai... 130 3.3e-06 1
UNIPROTKB|Q9NUD5 - symbol:ZCCHC3 "Zinc finger CCHC domain... 130 3.3e-06 1
RGD|1585203 - symbol:Zcchc3 "zinc finger, CCHC domain con... 129 4.4e-06 1
UNIPROTKB|Q8N567 - symbol:ZCCHC9 "Zinc finger CCHC domain... 126 4.4e-06 1
UNIPROTKB|F1ST82 - symbol:ZCCHC7 "Uncharacterized protein... 113 4.5e-06 2
MGI|MGI:1916335 - symbol:Zcchc9 "zinc finger, CCHC domain... 124 7.8e-06 1
UNIPROTKB|E2RQ32 - symbol:MEGF10 "Uncharacterized protein... 130 8.1e-06 2
UNIPROTKB|F1M4B9 - symbol:F1M4B9 "Uncharacterized protein... 112 9.6e-06 1
RGD|1307450 - symbol:Zcchc9 "zinc finger, CCHC domain con... 123 1.0e-05 1
UNIPROTKB|F1ML79 - symbol:ZCCHC9 "Uncharacterized protein... 123 1.0e-05 1
WB|WBGene00043995 - symbol:F40F12.9 species:6239 "Caenorh... 105 1.2e-05 1
UNIPROTKB|F6V033 - symbol:ZCCHC9 "Uncharacterized protein... 121 1.8e-05 1
UNIPROTKB|Q22C00 - symbol:TTHERM_01081690 "Putative uncha... 118 2.9e-05 2
UNIPROTKB|F1RF07 - symbol:ZCCHC9 "Uncharacterized protein... 119 3.2e-05 1
UNIPROTKB|F1MAP4 - symbol:Megf10 "Protein Megf10" species... 125 3.6e-05 2
MGI|MGI:2685177 - symbol:Megf10 "multiple EGF-like-domain... 125 3.6e-05 2
UNIPROTKB|Q96KG7 - symbol:MEGF10 "Multiple epidermal grow... 124 3.8e-05 2
UNIPROTKB|Q22C74 - symbol:TTHERM_01075660 "Putative uncha... 120 4.5e-05 2
UNIPROTKB|E1BZR6 - symbol:ZCCHC9 "Uncharacterized protein... 116 5.0e-05 1
FB|FBgn0027594 - symbol:drpr "draper" species:7227 "Droso... 121 7.1e-05 2
UNIPROTKB|E1C393 - symbol:MEGF10 "Uncharacterized protein... 119 7.8e-05 2
UNIPROTKB|F1MET4 - symbol:MEGF10 "Uncharacterized protein... 121 8.9e-05 2
TAIR|locus:2047092 - symbol:GRP2B "glycine-rich protein 2... 112 9.4e-05 1
UNIPROTKB|D6RAT4 - symbol:CNBP "Cellular nucleic acid-bin... 96 0.00013 1
MGI|MGI:2442912 - symbol:Zcchc7 "zinc finger, CCHC domain... 111 0.00018 2
TAIR|locus:2057295 - symbol:AT2G12880 species:3702 "Arabi... 94 0.00021 1
UNIPROTKB|P69730 - symbol:gag "Gag polyprotein" species:1... 116 0.00021 1
ZFIN|ZDB-GENE-080506-1 - symbol:megf10 "multiple EGF-like... 117 0.00022 2
TAIR|locus:2183607 - symbol:AT5G36240 species:3702 "Arabi... 88 0.00028 2
UNIPROTKB|Q8N3Z6 - symbol:ZCCHC7 "Zinc finger CCHC domain... 115 0.00033 1
UNIPROTKB|P05890 - symbol:gag "Gag polyprotein" species:1... 114 0.00039 1
UNIPROTKB|A0JM12 - symbol:megf10 "Multiple epidermal grow... 119 0.00039 2
ASPGD|ASPL0000046912 - symbol:AN1944 species:162425 "Emer... 115 0.00046 1
UNIPROTKB|P35962 - symbol:gag "Gag polyprotein" species:3... 113 0.00050 1
TAIR|locus:2149234 - symbol:AT5G20220 species:3702 "Arabi... 111 0.00060 1
UNIPROTKB|F1RKL7 - symbol:MEGF10 "Uncharacterized protein... 109 0.00066 1
UNIPROTKB|G4MX71 - symbol:MGG_15803 "Uncharacterized prot... 117 0.00067 2
UNIPROTKB|E2RIR0 - symbol:ZCCHC7 "Uncharacterized protein... 110 0.00086 1
UNIPROTKB|P12493 - symbol:gag "Gag polyprotein" species:1... 111 0.00087 1
UNIPROTKB|Q72497 - symbol:gag "Gag polyprotein" species:1... 111 0.00087 1
MGI|MGI:99914 - symbol:Lamc1 "laminin, gamma 1" species:1... 112 0.00096 2
UNIPROTKB|F1MAA7 - symbol:Lamc1 "Protein Lamc1" species:1... 112 0.00096 2
>TAIR|locus:2005719 [details] [associations]
symbol:AT1G75560 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006457 "protein folding" evidence=RCA] [GO:0009408 "response
to heat" evidence=RCA] [GO:0009644 "response to high light
intensity" evidence=RCA] [GO:0034976 "response to endoplasmic
reticulum stress" evidence=RCA] [GO:0042542 "response to hydrogen
peroxide" evidence=RCA] InterPro:IPR001878 Pfam:PF00098
PROSITE:PS50158 SMART:SM00343 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
eggNOG:COG5082 Gene3D:4.10.60.10 SUPFAM:SSF57756 EMBL:BT005709
EMBL:AK118306 EMBL:AK175193 EMBL:AK175269 EMBL:AK175304
EMBL:AK175841 EMBL:AK176208 EMBL:AK176516 EMBL:AK176616
EMBL:AK176626 IPI:IPI00543969 RefSeq:NP_001077828.1
RefSeq:NP_565112.1 UniGene:At.34758 ProteinModelPortal:Q8GXC5
SMR:Q8GXC5 PaxDb:Q8GXC5 PRIDE:Q8GXC5 EnsemblPlants:AT1G75560.1
EnsemblPlants:AT1G75560.2 GeneID:843892 KEGG:ath:AT1G75560
TAIR:At1g75560 InParanoid:Q8GXC5 OMA:NEGICHS PhylomeDB:Q8GXC5
ProtClustDB:CLSN2689214 ArrayExpress:Q8GXC5 Genevestigator:Q8GXC5
Uniprot:Q8GXC5
Length = 257
Score = 770 (276.1 bits), Expect = 2.4e-91, Sum P(2) = 2.4e-91
Identities = 127/161 (78%), Positives = 143/161 (88%)
Query: 32 YCDPPLRRET--RRSFSQGNLCNNCKRPGHFARECPNVAVCNNCGLPGHIASECTTQARC 89
Y D P RRE RR+FSQGNLCNNCKRPGHFAR+C NV+VCNNCGLPGHIA+ECT ++RC
Sbjct: 36 YHDAPSRREREPRRAFSQGNLCNNCKRPGHFARDCSNVSVCNNCGLPGHIAAECTAESRC 95
Query: 90 WNCREPGHMASNCHNEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTN 149
WNCREPGH+ASNC NEGICHSCGK+GHRARDCS GDLRLCNNC+K GH+AADCTN
Sbjct: 96 WNCREPGHVASNCSNEGICHSCGKSGHRARDCSNSDSRAGDLRLCNNCFKQGHLAADCTN 155
Query: 150 DKACKNCRKTGHIARDCQNEPVCNLCNIAGHVARQCPKGDS 190
DKACKNCR +GHIARDC+N+PVCN+C+I+GHVAR CPKGDS
Sbjct: 156 DKACKNCRTSGHIARDCRNDPVCNICSISGHVARHCPKGDS 196
Score = 220 (82.5 bits), Expect = 3.6e-18, P = 3.6e-18
Identities = 51/158 (32%), Positives = 79/158 (50%)
Query: 51 CNNCKRPGHFARECPNVAVCNNCGLPGHIASECT-TQAR------CWNCREPGHMASNCH 103
C NC+ PGH A C N +C++CG GH A +C+ + +R C NC + GH+A++C
Sbjct: 95 CWNCREPGHVASNCSNEGICHSCGKSGHRARDCSNSDSRAGDLRLCNNCFKQGHLAADCT 154
Query: 104 NEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCT------NDKACK--- 154
N+ C +C +GH ARDC +CN C GH+A C +D+ +
Sbjct: 155 NDKACKNCRTSGHIARDCRNDP-------VCNICSISGHVARHCPKGDSNYSDRGSRVRD 207
Query: 155 -NCRKTG--HIARDCQNEP---VCNLCNIAGHVARQCP 186
++ G ++RD + +C+ C GH A +CP
Sbjct: 208 GGMQRGGLSRMSRDREGVSAMIICHNCGGRGHRAYECP 245
Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
Identities = 48/144 (33%), Positives = 72/144 (50%)
Query: 46 SQGNLCNNCKRPGHFARECPN-------VAVCNNCGLPGHIASECTTQARCWNCREPGHM 98
S +C++C + GH AR+C N + +CNNC GH+A++CT C NCR GH+
Sbjct: 109 SNEGICHSCGKSGHRARDCSNSDSRAGDLRLCNNCFKQGHLAADCTNDKACKNCRTSGHI 168
Query: 99 ASNCHNEGICHSCGKTGHRARDC----STHVQSGGDLRLCNNCYKPG--HIAADCTNDKA 152
A +C N+ +C+ C +GH AR C S + G +R + G ++ D A
Sbjct: 169 ARDCRNDPVCNICSISGHVARHCPKGDSNYSDRGSRVR-DGGMQRGGLSRMSRDREGVSA 227
Query: 153 ---CKNCRKTGHIARDCQNEPVCN 173
C NC GH A +C + V +
Sbjct: 228 MIICHNCGGRGHRAYECPSARVAD 251
Score = 160 (61.4 bits), Expect = 2.4e-91, Sum P(2) = 2.4e-91
Identities = 29/43 (67%), Positives = 33/43 (76%)
Query: 231 MGHMSRDCVG--PLIICRNCGGRGHMAYECPSGRIADRGYRRY 271
+ MSRD G +IIC NCGGRGH AYECPS R+ADRG+RRY
Sbjct: 215 LSRMSRDREGVSAMIICHNCGGRGHRAYECPSARVADRGFRRY 257
Score = 144 (55.7 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 34/95 (35%), Positives = 44/95 (46%)
Query: 51 CNNCKRPGHFARECPNVAVCNNCGLPGHIASECT----------TQARCWNCREPGHMAS 100
C NC+ GH AR+C N VCN C + GH+A C ++ R + G
Sbjct: 159 CKNCRTSGHIARDCRNDPVCNICSISGHVARHCPKGDSNYSDRGSRVRDGGMQRGGLSRM 218
Query: 101 NCHNEG-----ICHSCGKTGHRARDC-STHVQSGG 129
+ EG ICH+CG GHRA +C S V G
Sbjct: 219 SRDREGVSAMIICHNCGGRGHRAYECPSARVADRG 253
Score = 46 (21.3 bits), Expect = 2.5e-79, Sum P(2) = 2.5e-79
Identities = 6/16 (37%), Positives = 10/16 (62%)
Query: 223 VICRSCNQMGHMSRDC 238
+IC +C GH + +C
Sbjct: 229 IICHNCGGRGHRAYEC 244
>POMBASE|SPAC13D6.02c [details] [associations]
symbol:byr3 "zinc finger protein Byr3" species:4896
"Schizosaccharomyces pombe" [GO:0000747 "conjugation with cellular
fusion" evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0031137 "regulation of conjugation with cellular fusion"
evidence=IGI] InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158
SMART:SM00343 PomBase:SPAC13D6.02c GO:GO:0005829 EMBL:CU329670
GO:GO:0005730 GenomeReviews:CU329670_GR GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 eggNOG:COG5082 Gene3D:4.10.60.10 SUPFAM:SSF57756
GO:GO:0000747 EMBL:S45038 PIR:T37622 RefSeq:NP_593680.1
ProteinModelPortal:P36627 STRING:P36627 PRIDE:P36627
EnsemblFungi:SPAC13D6.02c.1 GeneID:2542829 KEGG:spo:SPAC13D6.02c
HOGENOM:HOG000186262 KO:K09250 OMA:FQFMSSS OrthoDB:EOG4K0TXR
NextBio:20803871 GO:GO:0031137 Uniprot:P36627
Length = 179
Score = 260 (96.6 bits), Expect = 2.2e-27, Sum P(2) = 2.2e-27
Identities = 59/144 (40%), Positives = 73/144 (50%)
Query: 48 GNLCNNCKRPGHFARECPNVAVCNNCGLPGHIASECTT---QARCWNCREPGHMASNCHN 104
G C NC GH AREC ++C NC GH ASECT + C+ C GH+ +C +
Sbjct: 16 GPRCYNCGENGHQARECTKGSICYNCNQTGHKASECTEPQQEKTCYACGTAGHLVRDCPS 75
Query: 105 -----EGI-CHSCGKTGHRARDCSTH-VQSGGDL---RLCNNCY---KPGHIAADCTNDK 151
+G C+ CG+ GH ARDC T+ QSGG R NCY GH A DCT
Sbjct: 76 SPNPRQGAECYKCGRVGHIARDCRTNGQQSGGRFGGHRSNMNCYACGSYGHQARDCTMGV 135
Query: 152 ACKNCRKTGHIARDCQNEPVCNLC 175
C +C K GH + +CQ LC
Sbjct: 136 KCYSCGKIGHRSFECQQASDGQLC 159
Score = 227 (85.0 bits), Expect = 6.2e-24, Sum P(2) = 6.2e-24
Identities = 57/156 (36%), Positives = 74/156 (47%)
Query: 43 RSFSQGNLCNNCKRPGHFAREC--PNVA-VCNNCGLPGHIASECTTQARCWNCREPGHMA 99
R ++G++C NC + GH A EC P C CG GH+ +C + N R+
Sbjct: 30 RECTKGSICYNCNQTGHKASECTEPQQEKTCYACGTAGHLVRDCPSSP---NPRQGAE-- 84
Query: 100 SNCHNEGICHSCGKTGHRARDCSTH-VQSGGDL---RLCNNCY---KPGHIAADCTNDKA 152
C+ CG+ GH ARDC T+ QSGG R NCY GH A DCT
Sbjct: 85 --------CYKCGRVGHIARDCRTNGQQSGGRFGGHRSNMNCYACGSYGHQARDCTMGVK 136
Query: 153 CKNCRKTGHIARDCQNEP---VCNLCNIAGHVARQC 185
C +C K GH + +CQ +C CN GH+A C
Sbjct: 137 CYSCGKIGHRSFECQQASDGQLCYKCNQPGHIAVNC 172
Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 46/124 (37%), Positives = 60/124 (48%)
Query: 47 QGNLCNNCKRPGHFARECPNV------AVCNNCGLPGHIASECTTQAR------------ 88
Q C C GH R+CP+ A C CG GHIA +C T +
Sbjct: 56 QEKTCYACGTAGHLVRDCPSSPNPRQGAECYKCGRVGHIARDCRTNGQQSGGRFGGHRSN 115
Query: 89 --CWNCREPGHMASNCHNEGI-CHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAA 145
C+ C GH A +C G+ C+SCGK GHR+ +C Q D +LC C +PGHIA
Sbjct: 116 MNCYACGSYGHQARDC-TMGVKCYSCGKIGHRSFEC----QQASDGQLCYKCNQPGHIAV 170
Query: 146 DCTN 149
+CT+
Sbjct: 171 NCTS 174
Score = 194 (73.4 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 42/134 (31%), Positives = 59/134 (44%)
Query: 134 CNNCYKPGHIAADCTNDKACKNCRKTGHIARDC---QNEPVCNLCNIAGHVARQCPKGDS 190
C NC + GH A +CT C NC +TGH A +C Q E C C AGH+ R CP +
Sbjct: 19 CYNCGENGHQARECTKGSICYNCNQTGHKASECTEPQQEKTCYACGTAGHLVRDCPSSPN 78
Query: 191 LXXXXX----XXXXXXXXXXXXXXXXXXXXYVGYH-DVICRSCNQMGHMSRDC-VGPLII 244
+ G+ ++ C +C GH +RDC +G +
Sbjct: 79 PRQGAECYKCGRVGHIARDCRTNGQQSGGRFGGHRSNMNCYACGSYGHQARDCTMG--VK 136
Query: 245 CRNCGGRGHMAYEC 258
C +CG GH ++EC
Sbjct: 137 CYSCGKIGHRSFEC 150
Score = 185 (70.2 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 41/121 (33%), Positives = 53/121 (43%)
Query: 88 RCWNCREPGHMASNCHNEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADC 147
RC+NC E GH A C IC++C +TGH+A +C+ Q + C C GH+ DC
Sbjct: 18 RCYNCGENGHQARECTKGSICYNCNQTGHKASECTEPQQE----KTCYACGTAGHLVRDC 73
Query: 148 TNDK------ACKNCRKTGHIARDCQNEPV--------------CNLCNIAGHVARQCPK 187
+ C C + GHIARDC+ C C GH AR C
Sbjct: 74 PSSPNPRQGAECYKCGRVGHIARDCRTNGQQSGGRFGGHRSNMNCYACGSYGHQARDCTM 133
Query: 188 G 188
G
Sbjct: 134 G 134
Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 31/96 (32%), Positives = 46/96 (47%)
Query: 47 QGNLCNNCKRPGHFARECPNVAV--------------CNNCGLPGHIASECTTQARCWNC 92
QG C C R GH AR+C C CG GH A +CT +C++C
Sbjct: 81 QGAECYKCGRVGHIARDCRTNGQQSGGRFGGHRSNMNCYACGSYGHQARDCTMGVKCYSC 140
Query: 93 REPGHMASNCH--NEG-ICHSCGKTGHRARDCSTHV 125
+ GH + C ++G +C+ C + GH A +C++ V
Sbjct: 141 GKIGHRSFECQQASDGQLCYKCNQPGHIAVNCTSPV 176
Score = 73 (30.8 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 15/40 (37%), Positives = 20/40 (50%)
Query: 223 VICRSCNQMGHMSRDC--VGPLIICRNCGGRGHMAYECPS 260
V C SC ++GH S +C +C C GH+A C S
Sbjct: 135 VKCYSCGKIGHRSFECQQASDGQLCYKCNQPGHIAVNCTS 174
Score = 62 (26.9 bits), Expect = 2.2e-27, Sum P(2) = 2.2e-27
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 224 ICRSCNQMGHMSRDCVGPLI 243
+C CNQ GH++ +C P+I
Sbjct: 158 LCYKCNQPGHIAVNCTSPVI 177
>SGD|S000005199 [details] [associations]
symbol:GIS2 "Translational activator for mRNAs with internal
ribosome entry sites" species:4932 "Saccharomyces cerevisiae"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0000932 "cytoplasmic mRNA
processing body" evidence=IDA] [GO:0003729 "mRNA binding"
evidence=IDA] [GO:0010494 "cytoplasmic stress granule"
evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0042788 "polysomal ribosome" evidence=IPI] [GO:0045182
"translation regulator activity" evidence=IDA] [GO:0045727
"positive regulation of translation" evidence=IDA] [GO:0003697
"single-stranded DNA binding" evidence=IDA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR001878 Pfam:PF00098
PROSITE:PS50158 SMART:SM00343 SGD:S000005199 GO:GO:0046872
GO:GO:0008270 GO:GO:0003729 EMBL:BK006947 GO:GO:0045182
GO:GO:0042788 GO:GO:0003697 eggNOG:COG5082 Gene3D:4.10.60.10
SUPFAM:SSF57756 GO:GO:0045727 EMBL:X96722 HOGENOM:HOG000186262
KO:K09250 GeneTree:ENSGT00510000047065 EMBL:Z71531 EMBL:AY558002
PIR:S63228 RefSeq:NP_014144.1 ProteinModelPortal:P53849 SMR:P53849
DIP:DIP-2669N IntAct:P53849 MINT:MINT-2732013 STRING:P53849
PaxDb:P53849 PeptideAtlas:P53849 EnsemblFungi:YNL255C GeneID:855466
KEGG:sce:YNL255C CYGD:YNL255c OMA:QCYNCGE OrthoDB:EOG4SJ8Q6
NextBio:979403 Genevestigator:P53849 GermOnline:YNL255C
Uniprot:P53849
Length = 153
Score = 302 (111.4 bits), Expect = 7.3e-27, P = 7.3e-27
Identities = 53/148 (35%), Positives = 82/148 (55%)
Query: 51 CNNCKRPGHFARECPNVAVCNNCGLPGHIASECTTQA-----RCWNCREPGHMASNCHNE 105
C C + GH A +C + +C NC PGH+ ++CT +C+NC E GH+ S C +
Sbjct: 6 CYVCGKIGHLAEDCDSERLCYNCNKPGHVQTDCTMPRTVEFKQCYNCGETGHVRSECTVQ 65
Query: 106 GICHSCGKTGHRARDCSTHVQSGGDLRL-CNNCYKPGHIAADCTNDKA-----CKNCRKT 159
C +C +TGH +R+C ++ ++ C C P H+A DC + C C +
Sbjct: 66 R-CFNCNQTGHISRECPEPKKTSRFSKVSCYKCGGPNHMAKDCMKEDGISGLKCYTCGQA 124
Query: 160 GHIARDCQNEPVCNLCNIAGHVARQCPK 187
GH++RDCQN+ +C CN GH+++ CPK
Sbjct: 125 GHMSRDCQNDRLCYNCNETGHISKDCPK 152
Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 53/130 (40%), Positives = 72/130 (55%)
Query: 50 LCNNCKRPGHFAREC--PNVAV---CNNCGLPGHIASECTTQARCWNCREPGHMASNC-- 102
LC NC +PGH +C P C NCG GH+ SECT Q RC+NC + GH++ C
Sbjct: 24 LCYNCNKPGHVQTDCTMPRTVEFKQCYNCGETGHVRSECTVQ-RCFNCNQTGHISRECPE 82
Query: 103 ------HNEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKACKNC 156
++ C+ CG H A+DC G L+ C C + GH++ DC ND+ C NC
Sbjct: 83 PKKTSRFSKVSCYKCGGPNHMAKDCMKEDGISG-LK-CYTCGQAGHMSRDCQNDRLCYNC 140
Query: 157 RKTGHIARDC 166
+TGHI++DC
Sbjct: 141 NETGHISKDC 150
Score = 208 (78.3 bits), Expect = 2.5e-26, Sum P(2) = 2.5e-26
Identities = 40/116 (34%), Positives = 64/116 (55%)
Query: 85 TQARCWNCREPGHMASNCHNEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIA 144
+Q C+ C + GH+A +C +E +C++C K GH DC+ + + + C NC + GH+
Sbjct: 2 SQKACYVCGKIGHLAEDCDSERLCYNCNKPGHVQTDCT--MPRTVEFKQCYNCGETGHVR 59
Query: 145 ADCTNDKACKNCRKTGHIARDCQNEPV---------CNLCNIAGHVARQCPKGDSL 191
++CT + C NC +TGHI+R+C EP C C H+A+ C K D +
Sbjct: 60 SECTVQR-CFNCNQTGHISRECP-EPKKTSRFSKVSCYKCGGPNHMAKDCMKEDGI 113
Score = 104 (41.7 bits), Expect = 2.5e-26, Sum P(2) = 2.5e-26
Identities = 18/41 (43%), Positives = 24/41 (58%)
Query: 219 GYHDVICRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYECP 259
G + C +C Q GHMSRDC + C NC GH++ +CP
Sbjct: 112 GISGLKCYTCGQAGHMSRDCQNDRL-CYNCNETGHISKDCP 151
>UNIPROTKB|F1N8C2 [details] [associations]
symbol:CNBP "Cellular nucleic acid-binding protein"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 GO:GO:0005783
GO:GO:0005829 GO:GO:0005634 GO:GO:0046872 GO:GO:0008284
GO:GO:0008270 GO:GO:0045944 GO:GO:0003676 Gene3D:4.10.60.10
SUPFAM:SSF57756 OMA:FQFMSSS GeneTree:ENSGT00510000047065
IPI:IPI00582111 EMBL:AADN02013931 Ensembl:ENSGALT00000036274
ArrayExpress:F1N8C2 Uniprot:F1N8C2
Length = 171
Score = 258 (95.9 bits), Expect = 4.0e-26, Sum P(2) = 4.0e-26
Identities = 54/147 (36%), Positives = 77/147 (52%)
Query: 49 NLCNNCKRPGHFARECPNVAVCNNCGLP--GHIASECTTQAR---CWNCREPGHMASNCH 103
N C C R GH+ARECP + G+ G + + + C+ C E GH+A +C
Sbjct: 4 NECFKCGRTGHWARECPT-GIGRGRGMRSRGRAGFQFMSSSLPDICYRCGESGHLAKDCD 62
Query: 104 -NEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADC--TNDKACKNCRKTG 160
E C++CG+ GH A+DC + + C NC KPGH+A DC +++ C +C + G
Sbjct: 63 LQEDACYNCGRGGHIAKDCKEPKRERE--QCCYNCGKPGHLARDCDHADEQKCYSCGEFG 120
Query: 161 HIARDCQNEPVCNLCNIAGHVARQCPK 187
HI +DC + C C GHVA C K
Sbjct: 121 HIQKDC-TKVKCYRCGETGHVAINCSK 146
Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 52/125 (41%), Positives = 70/125 (56%)
Query: 69 VCNNCGLPGHIASECTTQA-RCWNCREPGHMASNC-----HNEGICHSCGKTGHRARDCS 122
+C CG GH+A +C Q C+NC GH+A +C E C++CGK GH ARDC
Sbjct: 47 ICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCD 106
Query: 123 THVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCRKTGHIARDCQ--NEPVCNLCNIAGH 180
H D + C +C + GHI DCT K C C +TGH+A +C +E C C +GH
Sbjct: 107 -HA----DEQKCYSCGEFGHIQKDCTKVK-CYRCGETGHVAINCSKTSEVNCYRCGESGH 160
Query: 181 VARQC 185
+AR+C
Sbjct: 161 LAREC 165
Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 53/136 (38%), Positives = 76/136 (55%)
Query: 44 SFSQGNLCNNCKRPGHFARECP-NVAVCNNCGLPGHIASECTTQAR-----CWNCREPGH 97
S S ++C C GH A++C C NCG GHIA +C R C+NC +PGH
Sbjct: 41 SSSLPDICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGH 100
Query: 98 MASNC-H-NEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADC--TNDKAC 153
+A +C H +E C+SCG+ GH +DC T V+ C C + GH+A +C T++ C
Sbjct: 101 LARDCDHADEQKCYSCGEFGHIQKDC-TKVK-------CYRCGETGHVAINCSKTSEVNC 152
Query: 154 KNCRKTGHIARDCQNE 169
C ++GH+AR+C E
Sbjct: 153 YRCGESGHLARECTIE 168
Score = 197 (74.4 bits), Expect = 9.8e-16, P = 9.8e-16
Identities = 37/88 (42%), Positives = 54/88 (61%)
Query: 39 RETRRSFSQGNLCNNCKRPGHFARECPNV--AVCNNCGLPGHIASECTTQARCWNCREPG 96
+E +R Q C NC +PGH AR+C + C +CG GHI +CT + +C+ C E G
Sbjct: 82 KEPKREREQ--CCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCT-KVKCYRCGETG 138
Query: 97 HMASNCH--NEGICHSCGKTGHRARDCS 122
H+A NC +E C+ CG++GH AR+C+
Sbjct: 139 HVAINCSKTSEVNCYRCGESGHLARECT 166
Score = 159 (61.0 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 38/107 (35%), Positives = 47/107 (43%)
Query: 89 CWNCREPGHMASNCHNEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCT 148
C+ C GH A C GI G R R S +C C + GH+A DC
Sbjct: 6 CFKCGRTGHWARECPT-GIGRGRGMRS-RGR-AGFQFMSSSLPDICYRCGESGHLAKDCD 62
Query: 149 -NDKACKNCRKTGHIARDC-----QNEPVCNLCNIAGHVARQCPKGD 189
+ AC NC + GHIA+DC + E C C GH+AR C D
Sbjct: 63 LQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHAD 109
Score = 87 (35.7 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 225 CRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYEC 258
C SC + GH+ +DC + C CG GH+A C
Sbjct: 113 CYSCGEFGHIQKDCTK--VKCYRCGETGHVAINC 144
Score = 75 (31.5 bits), Expect = 3.4e-18, Sum P(2) = 3.4e-18
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 223 VICRSCNQMGHMSRDCVGPLII-CRNCGGRGHMAYEC 258
V C C + GH++ +C + C CG GH+A EC
Sbjct: 129 VKCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 165
Score = 52 (23.4 bits), Expect = 4.0e-26, Sum P(2) = 4.0e-26
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 222 DVICRSCNQMGHMSRDC 238
+V C C + GH++R+C
Sbjct: 149 EVNCYRCGESGHLAREC 165
>ASPGD|ASPL0000028407 [details] [associations]
symbol:AN5111 species:162425 "Emericella nidulans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0000747 "conjugation with
cellular fusion" evidence=IEA] [GO:0031137 "regulation of
conjugation with cellular fusion" evidence=IEA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 EMBL:BN001305 Gene3D:4.10.60.10
SUPFAM:SSF57756 OMA:FQFMSSS EnsemblFungi:CADANIAT00003095
Uniprot:C8VEX3
Length = 171
Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
Identities = 56/151 (37%), Positives = 70/151 (46%)
Query: 51 CNNCKRPGHFAREC---PNVAVCNNCGLPGHIASECTTQARCWNCREPGHMASNCHNEGI 107
C NC GH +REC P C CG GHI+ EC N R G
Sbjct: 29 CYNCGGQGHVSRECTVAPKEKSCYRCGAVGHISRECPQAGE--NERPAGGQE-------- 78
Query: 108 CHSCGKTGHRARDCSTHVQSGGDL--------RLCNNCYKPGHIAADCTNDKACKNCRKT 159
C+ CG+ GH AR+CS GG + C +C GH+A DCT + C NC +T
Sbjct: 79 CYKCGRVGHIARNCSQGGSYGGGFGGGYGGRQQTCYSCGGFGHMARDCTQGQKCYNCGET 138
Query: 160 GHIARDC----QNEPVCNLCNIAGHVARQCP 186
GH++RDC + E VC C GH+ CP
Sbjct: 139 GHVSRDCPTEAKGERVCYQCKQPGHIQSACP 169
Score = 233 (87.1 bits), Expect = 5.1e-26, Sum P(2) = 5.1e-26
Identities = 55/157 (35%), Positives = 70/157 (44%)
Query: 44 SFSQGNLCNNCKRPGHFARECPN--VAVCNNCGLPGHIASECTTQAR---CWNCREPGHM 98
SF G +C NC H AR+CP C NCG GH++ ECT + C+ C GH+
Sbjct: 2 SFG-GRVCFNCGEATHQARDCPKKGTPTCYNCGGQGHVSRECTVAPKEKSCYRCGAVGHI 60
Query: 99 ASNCHNEGI---------CHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTN 149
+ C G C+ CG+ GH AR+CS GG Y G
Sbjct: 61 SRECPQAGENERPAGGQECYKCGRVGHIARNCS----QGGS-------YGGGFGGGYGGR 109
Query: 150 DKACKNCRKTGHIARDCQNEPVCNLCNIAGHVARQCP 186
+ C +C GH+ARDC C C GHV+R CP
Sbjct: 110 QQTCYSCGGFGHMARDCTQGQKCYNCGETGHVSRDCP 146
Score = 186 (70.5 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 42/115 (36%), Positives = 56/115 (48%)
Query: 36 PLRRETRRSFSQGNLCNNCKRPGHFARECPNVAVCNNCGLPGHIASECTTQARCWNCREP 95
P E R + G C C R GH AR C G G Q C++C
Sbjct: 65 PQAGENERP-AGGQECYKCGRVGHIARNCSQGGSYGG-GFGGGYGGR---QQTCYSCGGF 119
Query: 96 GHMASNCHNEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTND 150
GHMA +C C++CG+TGH +RDC T + G+ R+C C +PGHI + C N+
Sbjct: 120 GHMARDCTQGQKCYNCGETGHVSRDCPTEAK--GE-RVCYQCKQPGHIQSACPNN 171
Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 48/164 (29%), Positives = 67/164 (40%)
Query: 107 ICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCT---NDKACKNCRKTGHIA 163
+C +CG+ H+ARDC + G C NC GH++ +CT +K+C C GHI+
Sbjct: 7 VCFNCGEATHQARDCP---KKGTPT--CYNCGGQGHVSRECTVAPKEKSCYRCGAVGHIS 61
Query: 164 RDCQNEPVCNLCNIAGHVARQCPKGDSLXXXXXXXXXXXXXXXXXXXXXXXXXYVGYHDV 223
R+C AG R + Y G
Sbjct: 62 RECPQ---------AGENERPAGGQECYKCGRVGHIARNCSQGGSYGGGFGGGYGGRQQT 112
Query: 224 ICRSCNQMGHMSRDCV-GPLIICRNCGGRGHMAYECPSGRIADR 266
C SC GHM+RDC G C NCG GH++ +CP+ +R
Sbjct: 113 -CYSCGGFGHMARDCTQGQK--CYNCGETGHVSRDCPTEAKGER 153
Score = 175 (66.7 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 44/131 (33%), Positives = 56/131 (42%)
Query: 51 CNNCKRPGHFARECPNVAV---------CNNCGLPGHIASECTTQARCWNCREPGHMASN 101
C C GH +RECP C CG GHIA C+ Q + G
Sbjct: 51 CYRCGAVGHISRECPQAGENERPAGGQECYKCGRVGHIARNCS-QGGSYGGGFGGGYGGR 109
Query: 102 CHNEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTND----KACKNCR 157
+ C+SCG GH ARDC T Q C NC + GH++ DC + + C C+
Sbjct: 110 ---QQTCYSCGGFGHMARDC-TQGQK------CYNCGETGHVSRDCPTEAKGERVCYQCK 159
Query: 158 KTGHIARDCQN 168
+ GHI C N
Sbjct: 160 QPGHIQSACPN 170
Score = 76 (31.8 bits), Expect = 5.1e-26, Sum P(2) = 5.1e-26
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 225 CRSCNQMGHMSRDCVGPLI---ICRNCGGRGHMAYECPS 260
C +C + GH+SRDC +C C GH+ CP+
Sbjct: 132 CYNCGETGHVSRDCPTEAKGERVCYQCKQPGHIQSACPN 170
Score = 43 (20.2 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 6/15 (40%), Positives = 8/15 (53%)
Query: 224 ICRSCNQMGHMSRDC 238
+C C Q GH+ C
Sbjct: 154 VCYQCKQPGHIQSAC 168
>UNIPROTKB|O42395 [details] [associations]
symbol:CNBP "Cellular nucleic acid-binding protein"
species:9031 "Gallus gallus" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0008284
"positive regulation of cell proliferation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 GO:GO:0005783
GO:GO:0005829 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008284 GO:GO:0008270 GO:GO:0045944 GO:GO:0006351
eggNOG:COG5082 Gene3D:4.10.60.10 SUPFAM:SSF57756
HOGENOM:HOG000186262 KO:K09250 CTD:7555 HOVERGEN:HBG000397
OrthoDB:EOG45HRZN EMBL:AF004942 IPI:IPI00582111 RefSeq:NP_990238.1
UniGene:Gga.3333 ProteinModelPortal:O42395 STRING:O42395
GeneID:395731 KEGG:gga:395731 InParanoid:O42395 NextBio:20815799
ArrayExpress:O42395 Uniprot:O42395
Length = 172
Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 52/126 (41%), Positives = 70/126 (55%)
Query: 69 VCNNCGLPGHIASECTTQA--RCWNCREPGHMASNC-----HNEGICHSCGKTGHRARDC 121
+C CG GH+A +C Q C+NC GH+A +C E C++CGK GH ARDC
Sbjct: 47 ICYRCGESGHLAKDCDLQEDKACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 106
Query: 122 STHVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCRKTGHIARDCQ--NEPVCNLCNIAG 179
H D + C +C + GHI DCT K C C +TGH+A +C +E C C +G
Sbjct: 107 D-HA----DEQKCYSCGEFGHIQKDCTKVK-CYRCGETGHVAINCSKTSEVNCYRCGESG 160
Query: 180 HVARQC 185
H+AR+C
Sbjct: 161 HLAREC 166
Score = 253 (94.1 bits), Expect = 1.3e-25, Sum P(2) = 1.3e-25
Identities = 53/148 (35%), Positives = 77/148 (52%)
Query: 49 NLCNNCKRPGHFARECPNVAVCNNCGLP--GHIASECTTQAR---CWNCREPGHMASNC- 102
N C C R GH+ARECP + G+ G + + + C+ C E GH+A +C
Sbjct: 4 NECFKCGRTGHWARECPT-GIGRGRGMRSRGRAGFQFMSSSLPDICYRCGESGHLAKDCD 62
Query: 103 -HNEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADC--TNDKACKNCRKT 159
+ C++CG+ GH A+DC + + C NC KPGH+A DC +++ C +C +
Sbjct: 63 LQEDKACYNCGRGGHIAKDCKEPKRERE--QCCYNCGKPGHLARDCDHADEQKCYSCGEF 120
Query: 160 GHIARDCQNEPVCNLCNIAGHVARQCPK 187
GHI +DC + C C GHVA C K
Sbjct: 121 GHIQKDC-TKVKCYRCGETGHVAINCSK 147
Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 53/137 (38%), Positives = 76/137 (55%)
Query: 44 SFSQGNLCNNCKRPGHFARECP--NVAVCNNCGLPGHIASECTTQAR-----CWNCREPG 96
S S ++C C GH A++C C NCG GHIA +C R C+NC +PG
Sbjct: 41 SSSLPDICYRCGESGHLAKDCDLQEDKACYNCGRGGHIAKDCKEPKREREQCCYNCGKPG 100
Query: 97 HMASNC-H-NEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADC--TNDKA 152
H+A +C H +E C+SCG+ GH +DC T V+ C C + GH+A +C T++
Sbjct: 101 HLARDCDHADEQKCYSCGEFGHIQKDC-TKVK-------CYRCGETGHVAINCSKTSEVN 152
Query: 153 CKNCRKTGHIARDCQNE 169
C C ++GH+AR+C E
Sbjct: 153 CYRCGESGHLARECTIE 169
Score = 197 (74.4 bits), Expect = 9.8e-16, P = 9.8e-16
Identities = 37/88 (42%), Positives = 54/88 (61%)
Query: 39 RETRRSFSQGNLCNNCKRPGHFARECPNV--AVCNNCGLPGHIASECTTQARCWNCREPG 96
+E +R Q C NC +PGH AR+C + C +CG GHI +CT + +C+ C E G
Sbjct: 83 KEPKREREQ--CCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCT-KVKCYRCGETG 139
Query: 97 HMASNCH--NEGICHSCGKTGHRARDCS 122
H+A NC +E C+ CG++GH AR+C+
Sbjct: 140 HVAINCSKTSEVNCYRCGESGHLARECT 167
Score = 167 (63.8 bits), Expect = 2.8e-20, Sum P(2) = 2.8e-20
Identities = 40/108 (37%), Positives = 48/108 (44%)
Query: 89 CWNCREPGHMASNCHNEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCT 148
C+ C GH A C GI G R R S +C C + GH+A DC
Sbjct: 6 CFKCGRTGHWARECPT-GIGRGRGMRS-RGR-AGFQFMSSSLPDICYRCGESGHLAKDCD 62
Query: 149 --NDKACKNCRKTGHIARDC-----QNEPVCNLCNIAGHVARQCPKGD 189
DKAC NC + GHIA+DC + E C C GH+AR C D
Sbjct: 63 LQEDKACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHAD 110
Score = 87 (35.7 bits), Expect = 2.8e-20, Sum P(2) = 2.8e-20
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 225 CRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYEC 258
C SC + GH+ +DC + C CG GH+A C
Sbjct: 114 CYSCGEFGHIQKDCTK--VKCYRCGETGHVAINC 145
Score = 75 (31.5 bits), Expect = 5.0e-19, Sum P(2) = 5.0e-19
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 223 VICRSCNQMGHMSRDCVGPLII-CRNCGGRGHMAYEC 258
V C C + GH++ +C + C CG GH+A EC
Sbjct: 130 VKCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 166
Score = 52 (23.4 bits), Expect = 1.3e-25, Sum P(2) = 1.3e-25
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 222 DVICRSCNQMGHMSRDC 238
+V C C + GH++R+C
Sbjct: 150 EVNCYRCGESGHLAREC 166
>UNIPROTKB|B4DP17 [details] [associations]
symbol:CNBP "cDNA FLJ61146, highly similar to Cellular
nucleic acid-binding protein" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001878 Pfam:PF00098
PROSITE:PS50158 SMART:SM00343 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
HOGENOM:HOG000186262 HOVERGEN:HBG000397 EMBL:AC108673 EMBL:AC135587
UniGene:Hs.518249 HGNC:HGNC:13164 ChiTaRS:CNBP EMBL:AK298154
IPI:IPI00977873 SMR:B4DP17 STRING:B4DP17 Ensembl:ENST00000500450
UCSC:uc011bku.2 Uniprot:B4DP17
Length = 160
Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 52/125 (41%), Positives = 70/125 (56%)
Query: 69 VCNNCGLPGHIASECTTQA-RCWNCREPGHMASNC-----HNEGICHSCGKTGHRARDCS 122
+C CG GH+A +C Q C+NC GH+A +C E C++CGK GH ARDC
Sbjct: 36 ICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCD 95
Query: 123 THVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCRKTGHIARDCQ--NEPVCNLCNIAGH 180
H D + C +C + GHI DCT K C C +TGH+A +C +E C C +GH
Sbjct: 96 -HA----DEQKCYSCGEFGHIQKDCTKVK-CYRCGETGHVAINCSKTSEVNCYRCGESGH 149
Query: 181 VARQC 185
+AR+C
Sbjct: 150 LAREC 154
Score = 252 (93.8 bits), Expect = 1.7e-25, Sum P(2) = 1.7e-25
Identities = 54/142 (38%), Positives = 73/142 (51%)
Query: 49 NLCNNCKRPGHFARECPNVAVCNNCGLPGHIASECTTQARCWNCREPGHMASNCH-NEGI 107
N C C R GH+ARECP G G + C+ C E GH+A +C E
Sbjct: 4 NECFKCGRSGHWARECPTG------GGRGR-GMRSRGRDICYRCGESGHLAKDCDLQEDA 56
Query: 108 CHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADC--TNDKACKNCRKTGHIARD 165
C++CG+ GH A+DC + + C NC KPGH+A DC +++ C +C + GHI +D
Sbjct: 57 CYNCGRGGHIAKDCKEPKRERE--QCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKD 114
Query: 166 CQNEPVCNLCNIAGHVARQCPK 187
C + C C GHVA C K
Sbjct: 115 C-TKVKCYRCGETGHVAINCSK 135
Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 53/135 (39%), Positives = 77/135 (57%)
Query: 46 SQG-NLCNNCKRPGHFARECP-NVAVCNNCGLPGHIASECTTQAR-----CWNCREPGHM 98
S+G ++C C GH A++C C NCG GHIA +C R C+NC +PGH+
Sbjct: 31 SRGRDICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHL 90
Query: 99 ASNC-H-NEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADC--TNDKACK 154
A +C H +E C+SCG+ GH +DC T V+ C C + GH+A +C T++ C
Sbjct: 91 ARDCDHADEQKCYSCGEFGHIQKDC-TKVK-------CYRCGETGHVAINCSKTSEVNCY 142
Query: 155 NCRKTGHIARDCQNE 169
C ++GH+AR+C E
Sbjct: 143 RCGESGHLARECTIE 157
Score = 197 (74.4 bits), Expect = 9.8e-16, P = 9.8e-16
Identities = 37/88 (42%), Positives = 54/88 (61%)
Query: 39 RETRRSFSQGNLCNNCKRPGHFARECPNV--AVCNNCGLPGHIASECTTQARCWNCREPG 96
+E +R Q C NC +PGH AR+C + C +CG GHI +CT + +C+ C E G
Sbjct: 71 KEPKREREQ--CCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCT-KVKCYRCGETG 127
Query: 97 HMASNCH--NEGICHSCGKTGHRARDCS 122
H+A NC +E C+ CG++GH AR+C+
Sbjct: 128 HVAINCSKTSEVNCYRCGESGHLARECT 155
Score = 183 (69.5 bits), Expect = 6.0e-22, Sum P(2) = 6.0e-22
Identities = 37/93 (39%), Positives = 49/93 (52%)
Query: 108 CHSCGKTGHRARDCSTHVQSGGDLR-----LCNNCYKPGHIAADCT-NDKACKNCRKTGH 161
C CG++GH AR+C T G +R +C C + GH+A DC + AC NC + GH
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRDICYRCGESGHLAKDCDLQEDACYNCGRGGH 65
Query: 162 IARDC-----QNEPVCNLCNIAGHVARQCPKGD 189
IA+DC + E C C GH+AR C D
Sbjct: 66 IAKDCKEPKREREQCCYNCGKPGHLARDCDHAD 98
Score = 87 (35.7 bits), Expect = 6.0e-22, Sum P(2) = 6.0e-22
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 225 CRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYEC 258
C SC + GH+ +DC + C CG GH+A C
Sbjct: 102 CYSCGEFGHIQKDCTK--VKCYRCGETGHVAINC 133
Score = 75 (31.5 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 223 VICRSCNQMGHMSRDCVGPLII-CRNCGGRGHMAYEC 258
V C C + GH++ +C + C CG GH+A EC
Sbjct: 118 VKCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 154
Score = 52 (23.4 bits), Expect = 1.7e-25, Sum P(2) = 1.7e-25
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 222 DVICRSCNQMGHMSRDC 238
+V C C + GH++R+C
Sbjct: 138 EVNCYRCGESGHLAREC 154
>UNIPROTKB|Q3T0Q6 [details] [associations]
symbol:CNBP "Cellular nucleic acid-binding protein"
species:9913 "Bos taurus" [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0008284
"positive regulation of cell proliferation" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001878 Pfam:PF00098
PROSITE:PS50158 SMART:SM00343 GO:GO:0005783 GO:GO:0005829
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008284
GO:GO:0008270 GO:GO:0045944 GO:GO:0006351 eggNOG:COG5082
Gene3D:4.10.60.10 SUPFAM:SSF57756 HOGENOM:HOG000186262 KO:K09250
OMA:FQFMSSS EMBL:BC102298 IPI:IPI00697831 RefSeq:NP_001029396.1
UniGene:Bt.9541 ProteinModelPortal:Q3T0Q6 STRING:Q3T0Q6
PRIDE:Q3T0Q6 Ensembl:ENSBTAT00000016130 GeneID:504831
KEGG:bta:504831 CTD:7555 GeneTree:ENSGT00510000047065
HOVERGEN:HBG000397 InParanoid:Q3T0Q6 OrthoDB:EOG45HRZN
NextBio:20866851 Uniprot:Q3T0Q6
Length = 170
Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 52/125 (41%), Positives = 70/125 (56%)
Query: 69 VCNNCGLPGHIASECTTQA-RCWNCREPGHMASNC-----HNEGICHSCGKTGHRARDCS 122
+C CG GH+A +C Q C+NC GH+A +C E C++CGK GH ARDC
Sbjct: 46 ICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCD 105
Query: 123 THVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCRKTGHIARDCQ--NEPVCNLCNIAGH 180
H D + C +C + GHI DCT K C C +TGH+A +C +E C C +GH
Sbjct: 106 -HA----DEQKCYSCGEFGHIQKDCTKVK-CYRCGETGHVAINCSKTSEVNCYRCGESGH 159
Query: 181 VARQC 185
+AR+C
Sbjct: 160 LAREC 164
Score = 252 (93.8 bits), Expect = 1.7e-25, Sum P(2) = 1.7e-25
Identities = 54/146 (36%), Positives = 73/146 (50%)
Query: 49 NLCNNCKRPGHFARECPNVAV----CNNCGLPGHIASECTTQARCWNCREPGHMASNCH- 103
N C C R GH+ARECP + G S C+ C E GH+A +C
Sbjct: 4 NECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDI-CYRCGESGHLAKDCDL 62
Query: 104 NEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADC--TNDKACKNCRKTGH 161
E C++CG+ GH A+DC + + C NC KPGH+A DC +++ C +C + GH
Sbjct: 63 QEDACYNCGRGGHIAKDCKEPKRERE--QCCYNCGKPGHLARDCDHADEQKCYSCGEFGH 120
Query: 162 IARDCQNEPVCNLCNIAGHVARQCPK 187
I +DC + C C GHVA C K
Sbjct: 121 IQKDC-TKVKCYRCGETGHVAINCSK 145
Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 53/136 (38%), Positives = 76/136 (55%)
Query: 44 SFSQGNLCNNCKRPGHFARECP-NVAVCNNCGLPGHIASECTTQAR-----CWNCREPGH 97
S S ++C C GH A++C C NCG GHIA +C R C+NC +PGH
Sbjct: 40 SSSLPDICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGH 99
Query: 98 MASNC-H-NEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADC--TNDKAC 153
+A +C H +E C+SCG+ GH +DC T V+ C C + GH+A +C T++ C
Sbjct: 100 LARDCDHADEQKCYSCGEFGHIQKDC-TKVK-------CYRCGETGHVAINCSKTSEVNC 151
Query: 154 KNCRKTGHIARDCQNE 169
C ++GH+AR+C E
Sbjct: 152 YRCGESGHLARECTIE 167
Score = 197 (74.4 bits), Expect = 9.8e-16, P = 9.8e-16
Identities = 37/88 (42%), Positives = 54/88 (61%)
Query: 39 RETRRSFSQGNLCNNCKRPGHFARECPNV--AVCNNCGLPGHIASECTTQARCWNCREPG 96
+E +R Q C NC +PGH AR+C + C +CG GHI +CT + +C+ C E G
Sbjct: 81 KEPKREREQ--CCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCT-KVKCYRCGETG 137
Query: 97 HMASNCH--NEGICHSCGKTGHRARDCS 122
H+A NC +E C+ CG++GH AR+C+
Sbjct: 138 HVAINCSKTSEVNCYRCGESGHLARECT 165
Score = 164 (62.8 bits), Expect = 5.8e-20, Sum P(2) = 5.8e-20
Identities = 38/107 (35%), Positives = 49/107 (45%)
Query: 89 CWNCREPGHMASNCHNEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCT 148
C+ C GH A C G G+ G R+R S +C C + GH+A DC
Sbjct: 6 CFKCGRSGHWARECPTGG---GRGR-GMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCD 61
Query: 149 -NDKACKNCRKTGHIARDC-----QNEPVCNLCNIAGHVARQCPKGD 189
+ AC NC + GHIA+DC + E C C GH+AR C D
Sbjct: 62 LQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHAD 108
Score = 87 (35.7 bits), Expect = 5.8e-20, Sum P(2) = 5.8e-20
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 225 CRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYEC 258
C SC + GH+ +DC + C CG GH+A C
Sbjct: 112 CYSCGEFGHIQKDCTK--VKCYRCGETGHVAINC 143
Score = 75 (31.5 bits), Expect = 1.0e-18, Sum P(2) = 1.0e-18
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 223 VICRSCNQMGHMSRDCVGPLII-CRNCGGRGHMAYEC 258
V C C + GH++ +C + C CG GH+A EC
Sbjct: 128 VKCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 164
Score = 52 (23.4 bits), Expect = 1.7e-25, Sum P(2) = 1.7e-25
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 222 DVICRSCNQMGHMSRDC 238
+V C C + GH++R+C
Sbjct: 148 EVNCYRCGESGHLAREC 164
>UNIPROTKB|G3MZ41 [details] [associations]
symbol:ZCCHC13 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
GeneTree:ENSGT00510000047065 OMA:SSKECFK EMBL:DAAA02072583
Ensembl:ENSBTAT00000001124 Uniprot:G3MZ41
Length = 175
Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 54/140 (38%), Positives = 74/140 (52%)
Query: 58 GHFARECPNVA---VCNNCGLPGHIASECTT-QARCWNCREPGHMASNC---HNEG--IC 108
GH A +C + +C CG GH A +C C+NC + GH+A +C EG C
Sbjct: 38 GHGA-QCSSTTLPVICYRCGKFGHYAKDCDLLDDICYNCGKSGHIAKDCAEPKREGERCC 96
Query: 109 HSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCRKTGHIARDCQ- 167
++CG+ GH ARDC + R C +C K GHI CT K C C + GH+A +C+
Sbjct: 97 YTCGRPGHLARDCDRQEE-----RKCYSCGKSGHIQKYCTQVK-CYRCGEIGHVAINCRK 150
Query: 168 -NEPVCNLCNIAGHVARQCP 186
NE C C +GH+ R+CP
Sbjct: 151 MNEVNCYRCGESGHLTRECP 170
Score = 245 (91.3 bits), Expect = 7.1e-25, Sum P(2) = 7.1e-25
Identities = 54/144 (37%), Positives = 73/144 (50%)
Query: 51 CNNCKRPGHFARECPNVAVCNNCGLPG--HIA--SECTTQARCWNCREPGHMASNCHN-E 105
C C R GH+A C G G H A S T C+ C + GH A +C +
Sbjct: 10 CFKCGRVGHWAPACSKGGGARGRGARGRGHGAQCSSTTLPVICYRCGKFGHYAKDCDLLD 69
Query: 106 GICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTN--DKACKNCRKTGHIA 163
IC++CGK+GH A+DC+ + G R C C +PGH+A DC ++ C +C K+GHI
Sbjct: 70 DICYNCGKSGHIAKDCAEPKREGE--RCCYTCGRPGHLARDCDRQEERKCYSCGKSGHIQ 127
Query: 164 RDCQNEPVCNLCNIAGHVARQCPK 187
+ C + C C GHVA C K
Sbjct: 128 KYC-TQVKCYRCGEIGHVAINCRK 150
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 48/130 (36%), Positives = 71/130 (54%)
Query: 50 LCNNCKRPGHFARECPNVA-VCNNCGLPGHIASECTTQAR-----CWNCREPGHMASNC- 102
+C C + GH+A++C + +C NCG GHIA +C R C+ C PGH+A +C
Sbjct: 51 ICYRCGKFGHYAKDCDLLDDICYNCGKSGHIAKDCAEPKREGERCCYTCGRPGHLARDCD 110
Query: 103 -HNEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCT--NDKACKNCRKT 159
E C+SCGK+GH + C T V+ C C + GH+A +C N+ C C ++
Sbjct: 111 RQEERKCYSCGKSGHIQKYC-TQVK-------CYRCGEIGHVAINCRKMNEVNCYRCGES 162
Query: 160 GHIARDCQNE 169
GH+ R+C E
Sbjct: 163 GHLTRECPIE 172
Score = 95 (38.5 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 223 VICRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYEC 258
VIC C + GH ++DC IC NCG GH+A +C
Sbjct: 50 VICYRCGKFGHYAKDCDLLDDICYNCGKSGHIAKDC 85
Score = 53 (23.7 bits), Expect = 7.1e-25, Sum P(2) = 7.1e-25
Identities = 7/18 (38%), Positives = 13/18 (72%)
Query: 221 HDVICRSCNQMGHMSRDC 238
++V C C + GH++R+C
Sbjct: 152 NEVNCYRCGESGHLTREC 169
Score = 41 (19.5 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 8/17 (47%), Positives = 8/17 (47%)
Query: 172 CNLCNIAGHVARQCPKG 188
C C GH A C KG
Sbjct: 10 CFKCGRVGHWAPACSKG 26
>UNIPROTKB|P62633 [details] [associations]
symbol:CNBP "Cellular nucleic acid-binding protein"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0008284 "positive regulation of cell proliferation"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005783 "endoplasmic reticulum"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0006695 "cholesterol biosynthetic process" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] InterPro:IPR001878 Pfam:PF00098
PROSITE:PS50158 SMART:SM00343 GO:GO:0005783 GO:GO:0005829
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008284
EMBL:CH471052 GO:GO:0008270 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 GO:GO:0006695 eggNOG:COG5082 Gene3D:4.10.60.10
SUPFAM:SSF57756 HOGENOM:HOG000186262 KO:K09250 CTD:7555
HOVERGEN:HBG000397 OrthoDB:EOG45HRZN EMBL:M28372 EMBL:U19765
EMBL:AY329622 EMBL:AK054592 EMBL:DQ092367 EMBL:DQ091187
EMBL:AK314380 EMBL:BT019613 EMBL:AC108673 EMBL:AC135587
EMBL:BC000288 EMBL:BC014911 EMBL:BC093058 IPI:IPI00430812
IPI:IPI00430813 IPI:IPI00430814 IPI:IPI00895911 IPI:IPI00967344
PIR:A32760 RefSeq:NP_001120665.1 RefSeq:NP_001120666.1
RefSeq:NP_001120668.1 RefSeq:NP_003409.1 UniGene:Hs.518249
ProteinModelPortal:P62633 SMR:P62633 IntAct:P62633 STRING:P62633
PhosphoSite:P62633 DMDM:50401852 PaxDb:P62633 PRIDE:P62633
DNASU:7555 Ensembl:ENST00000422453 Ensembl:ENST00000446936
Ensembl:ENST00000451728 Ensembl:ENST00000502976
Ensembl:ENST00000504813 GeneID:7555 KEGG:hsa:7555 UCSC:uc003elq.4
UCSC:uc003elr.4 GeneCards:GC03M128886 HGNC:HGNC:13164 MIM:116955
MIM:602668 neXtProt:NX_P62633 Orphanet:606 PharmGKB:PA37737
InParanoid:P62633 PhylomeDB:P62633 ChiTaRS:CNBP GenomeRNAi:7555
NextBio:29559 ArrayExpress:P62633 Bgee:P62633 CleanEx:HS_CNBP
Genevestigator:P62633 GermOnline:ENSG00000169714 Uniprot:P62633
Length = 177
Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 52/125 (41%), Positives = 70/125 (56%)
Query: 69 VCNNCGLPGHIASECTTQA-RCWNCREPGHMASNC-----HNEGICHSCGKTGHRARDCS 122
+C CG GH+A +C Q C+NC GH+A +C E C++CGK GH ARDC
Sbjct: 53 ICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCD 112
Query: 123 THVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCRKTGHIARDCQ--NEPVCNLCNIAGH 180
H D + C +C + GHI DCT K C C +TGH+A +C +E C C +GH
Sbjct: 113 -HA----DEQKCYSCGEFGHIQKDCTKVK-CYRCGETGHVAINCSKTSEVNCYRCGESGH 166
Query: 181 VARQC 185
+AR+C
Sbjct: 167 LAREC 171
Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 53/136 (38%), Positives = 76/136 (55%)
Query: 44 SFSQGNLCNNCKRPGHFARECP-NVAVCNNCGLPGHIASECTTQAR-----CWNCREPGH 97
S S ++C C GH A++C C NCG GHIA +C R C+NC +PGH
Sbjct: 47 SSSLPDICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGH 106
Query: 98 MASNC-H-NEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADC--TNDKAC 153
+A +C H +E C+SCG+ GH +DC T V+ C C + GH+A +C T++ C
Sbjct: 107 LARDCDHADEQKCYSCGEFGHIQKDC-TKVK-------CYRCGETGHVAINCSKTSEVNC 158
Query: 154 KNCRKTGHIARDCQNE 169
C ++GH+AR+C E
Sbjct: 159 YRCGESGHLARECTIE 174
Score = 243 (90.6 bits), Expect = 1.5e-24, Sum P(2) = 1.5e-24
Identities = 54/152 (35%), Positives = 75/152 (49%)
Query: 49 NLCNNCKRPGHFARECPNVAV----CNNCGLPGHIASE------CTTQARCWNCREPGHM 98
N C C R GH+ARECP + G G + + C+ C E GH+
Sbjct: 4 NECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHL 63
Query: 99 ASNCH-NEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADC--TNDKACKN 155
A +C E C++CG+ GH A+DC + + C NC KPGH+A DC +++ C +
Sbjct: 64 AKDCDLQEDACYNCGRGGHIAKDCKEPKRERE--QCCYNCGKPGHLARDCDHADEQKCYS 121
Query: 156 CRKTGHIARDCQNEPVCNLCNIAGHVARQCPK 187
C + GHI +DC + C C GHVA C K
Sbjct: 122 CGEFGHIQKDC-TKVKCYRCGETGHVAINCSK 152
Score = 197 (74.4 bits), Expect = 9.8e-16, P = 9.8e-16
Identities = 37/88 (42%), Positives = 54/88 (61%)
Query: 39 RETRRSFSQGNLCNNCKRPGHFARECPNV--AVCNNCGLPGHIASECTTQARCWNCREPG 96
+E +R Q C NC +PGH AR+C + C +CG GHI +CT + +C+ C E G
Sbjct: 88 KEPKREREQ--CCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCT-KVKCYRCGETG 144
Query: 97 HMASNCH--NEGICHSCGKTGHRARDCS 122
H+A NC +E C+ CG++GH AR+C+
Sbjct: 145 HVAINCSKTSEVNCYRCGESGHLARECT 172
Score = 156 (60.0 bits), Expect = 3.9e-19, Sum P(2) = 3.9e-19
Identities = 38/111 (34%), Positives = 49/111 (44%)
Query: 89 CWNCREPGHMASNCHNEGI----CHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIA 144
C+ C GH A C G S G+ G + D S +C C + GH+A
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTS-DRGFQFVSSSLPDICYRCGESGHLA 64
Query: 145 ADCT-NDKACKNCRKTGHIARDC-----QNEPVCNLCNIAGHVARQCPKGD 189
DC + AC NC + GHIA+DC + E C C GH+AR C D
Sbjct: 65 KDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHAD 115
Score = 103 (41.3 bits), Expect = 0.00076, P = 0.00076
Identities = 25/87 (28%), Positives = 33/87 (37%)
Query: 172 CNLCNIAGHVARQCPKGDSLXXXXXXXXXXXXXXXXXXXXXXXXXYVGYHDVICRSCNQM 231
C C +GH AR+CP G D IC C +
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSL----PD-ICYRCGES 60
Query: 232 GHMSRDCVGPLIICRNCGGRGHMAYEC 258
GH+++DC C NCG GH+A +C
Sbjct: 61 GHLAKDCDLQEDACYNCGRGGHIAKDC 87
Score = 87 (35.7 bits), Expect = 3.9e-19, Sum P(2) = 3.9e-19
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 225 CRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYEC 258
C SC + GH+ +DC + C CG GH+A C
Sbjct: 119 CYSCGEFGHIQKDCTK--VKCYRCGETGHVAINC 150
Score = 75 (31.5 bits), Expect = 7.0e-18, Sum P(2) = 7.0e-18
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 223 VICRSCNQMGHMSRDCVGPLII-CRNCGGRGHMAYEC 258
V C C + GH++ +C + C CG GH+A EC
Sbjct: 135 VKCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 171
Score = 52 (23.4 bits), Expect = 1.5e-24, Sum P(2) = 1.5e-24
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 222 DVICRSCNQMGHMSRDC 238
+V C C + GH++R+C
Sbjct: 155 EVNCYRCGESGHLAREC 171
>UNIPROTKB|Q4R501 [details] [associations]
symbol:Q4R501 "Brain cDNA, clone: QnpA-14556, similar to
human zinc finger protein 9 (a cellular retroviral nucleicacid
binding protein) (ZNF9)," species:9541 "Macaca fascicularis"
[GO:0005634 "nucleus" evidence=ISS] [GO:0005783 "endoplasmic
reticulum" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0008284 "positive regulation of cell proliferation"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
GO:GO:0005783 GO:GO:0005829 GO:GO:0005634 GO:GO:0046872
GO:GO:0008284 GO:GO:0008270 GO:GO:0045944 GO:GO:0003676
Gene3D:4.10.60.10 SUPFAM:SSF57756 HOVERGEN:HBG000397 EMBL:AB169743
EMBL:AB174174 ProteinModelPortal:Q4R501 SMR:Q4R501 PRIDE:Q4R501
Uniprot:Q4R501
Length = 177
Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 52/125 (41%), Positives = 70/125 (56%)
Query: 69 VCNNCGLPGHIASECTTQA-RCWNCREPGHMASNC-----HNEGICHSCGKTGHRARDCS 122
+C CG GH+A +C Q C+NC GH+A +C E C++CGK GH ARDC
Sbjct: 53 ICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCD 112
Query: 123 THVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCRKTGHIARDCQ--NEPVCNLCNIAGH 180
H D + C +C + GHI DCT K C C +TGH+A +C +E C C +GH
Sbjct: 113 -HA----DEQKCYSCGEFGHIQKDCTKVK-CYRCGETGHVAINCSKTSEVNCYRCGESGH 166
Query: 181 VARQC 185
+AR+C
Sbjct: 167 LAREC 171
Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 53/136 (38%), Positives = 76/136 (55%)
Query: 44 SFSQGNLCNNCKRPGHFARECP-NVAVCNNCGLPGHIASECTTQAR-----CWNCREPGH 97
S S ++C C GH A++C C NCG GHIA +C R C+NC +PGH
Sbjct: 47 SSSLPDICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGH 106
Query: 98 MASNC-H-NEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADC--TNDKAC 153
+A +C H +E C+SCG+ GH +DC T V+ C C + GH+A +C T++ C
Sbjct: 107 LARDCDHADEQKCYSCGEFGHIQKDC-TKVK-------CYRCGETGHVAINCSKTSEVNC 158
Query: 154 KNCRKTGHIARDCQNE 169
C ++GH+AR+C E
Sbjct: 159 YRCGESGHLARECTIE 174
Score = 243 (90.6 bits), Expect = 1.5e-24, Sum P(2) = 1.5e-24
Identities = 54/152 (35%), Positives = 75/152 (49%)
Query: 49 NLCNNCKRPGHFARECPNVAV----CNNCGLPGHIASE------CTTQARCWNCREPGHM 98
N C C R GH+ARECP + G G + + C+ C E GH+
Sbjct: 4 NECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHL 63
Query: 99 ASNCH-NEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADC--TNDKACKN 155
A +C E C++CG+ GH A+DC + + C NC KPGH+A DC +++ C +
Sbjct: 64 AKDCDLQEDACYNCGRGGHIAKDCKEPKRERE--QCCYNCGKPGHLARDCDHADEQKCYS 121
Query: 156 CRKTGHIARDCQNEPVCNLCNIAGHVARQCPK 187
C + GHI +DC + C C GHVA C K
Sbjct: 122 CGEFGHIQKDC-TKVKCYRCGETGHVAINCSK 152
Score = 197 (74.4 bits), Expect = 9.8e-16, P = 9.8e-16
Identities = 37/88 (42%), Positives = 54/88 (61%)
Query: 39 RETRRSFSQGNLCNNCKRPGHFARECPNV--AVCNNCGLPGHIASECTTQARCWNCREPG 96
+E +R Q C NC +PGH AR+C + C +CG GHI +CT + +C+ C E G
Sbjct: 88 KEPKREREQ--CCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCT-KVKCYRCGETG 144
Query: 97 HMASNCH--NEGICHSCGKTGHRARDCS 122
H+A NC +E C+ CG++GH AR+C+
Sbjct: 145 HVAINCSKTSEVNCYRCGESGHLARECT 172
Score = 156 (60.0 bits), Expect = 3.9e-19, Sum P(2) = 3.9e-19
Identities = 38/111 (34%), Positives = 49/111 (44%)
Query: 89 CWNCREPGHMASNCHNEGI----CHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIA 144
C+ C GH A C G S G+ G + D S +C C + GH+A
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTS-DRGFQFVSSSLPDICYRCGESGHLA 64
Query: 145 ADCT-NDKACKNCRKTGHIARDC-----QNEPVCNLCNIAGHVARQCPKGD 189
DC + AC NC + GHIA+DC + E C C GH+AR C D
Sbjct: 65 KDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHAD 115
Score = 103 (41.3 bits), Expect = 0.00076, P = 0.00076
Identities = 25/87 (28%), Positives = 33/87 (37%)
Query: 172 CNLCNIAGHVARQCPKGDSLXXXXXXXXXXXXXXXXXXXXXXXXXYVGYHDVICRSCNQM 231
C C +GH AR+CP G D IC C +
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSL----PD-ICYRCGES 60
Query: 232 GHMSRDCVGPLIICRNCGGRGHMAYEC 258
GH+++DC C NCG GH+A +C
Sbjct: 61 GHLAKDCDLQEDACYNCGRGGHIAKDC 87
Score = 87 (35.7 bits), Expect = 3.9e-19, Sum P(2) = 3.9e-19
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 225 CRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYEC 258
C SC + GH+ +DC + C CG GH+A C
Sbjct: 119 CYSCGEFGHIQKDCTK--VKCYRCGETGHVAINC 150
Score = 75 (31.5 bits), Expect = 7.0e-18, Sum P(2) = 7.0e-18
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 223 VICRSCNQMGHMSRDCVGPLII-CRNCGGRGHMAYEC 258
V C C + GH++ +C + C CG GH+A EC
Sbjct: 135 VKCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 171
Score = 52 (23.4 bits), Expect = 1.5e-24, Sum P(2) = 1.5e-24
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 222 DVICRSCNQMGHMSRDC 238
+V C C + GH++R+C
Sbjct: 155 EVNCYRCGESGHLAREC 171
>UNIPROTKB|Q5R5R5 [details] [associations]
symbol:CNBP "Cellular nucleic acid-binding protein"
species:9601 "Pongo abelii" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005783 "endoplasmic reticulum" evidence=ISS] [GO:0005829
"cytosol" evidence=ISS] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158
SMART:SM00343 GO:GO:0005783 GO:GO:0005829 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 GO:GO:0008284 GO:GO:0008270
GO:GO:0045944 GO:GO:0006351 Gene3D:4.10.60.10 SUPFAM:SSF57756
KO:K09250 CTD:7555 GeneTree:ENSGT00510000047065 HOVERGEN:HBG000397
OMA:CPNGQGG EMBL:CR860791 RefSeq:NP_001126703.1 UniGene:Pab.18652
ProteinModelPortal:Q5R5R5 SMR:Q5R5R5 PRIDE:Q5R5R5
Ensembl:ENSPPYT00000015613 GeneID:100173703 KEGG:pon:100173703
InParanoid:Q5R5R5 Uniprot:Q5R5R5
Length = 177
Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 52/125 (41%), Positives = 70/125 (56%)
Query: 69 VCNNCGLPGHIASECTTQA-RCWNCREPGHMASNC-----HNEGICHSCGKTGHRARDCS 122
+C CG GH+A +C Q C+NC GH+A +C E C++CGK GH ARDC
Sbjct: 53 ICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCD 112
Query: 123 THVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCRKTGHIARDCQ--NEPVCNLCNIAGH 180
H D + C +C + GHI DCT K C C +TGH+A +C +E C C +GH
Sbjct: 113 -HA----DEQKCYSCGEFGHIQKDCTKVK-CYRCGETGHVAINCSKTSEVNCYRCGESGH 166
Query: 181 VARQC 185
+AR+C
Sbjct: 167 LAREC 171
Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 53/136 (38%), Positives = 76/136 (55%)
Query: 44 SFSQGNLCNNCKRPGHFARECP-NVAVCNNCGLPGHIASECTTQAR-----CWNCREPGH 97
S S ++C C GH A++C C NCG GHIA +C R C+NC +PGH
Sbjct: 47 SSSLPDICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGH 106
Query: 98 MASNC-H-NEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADC--TNDKAC 153
+A +C H +E C+SCG+ GH +DC T V+ C C + GH+A +C T++ C
Sbjct: 107 LARDCDHADEQKCYSCGEFGHIQKDC-TKVK-------CYRCGETGHVAINCSKTSEVNC 158
Query: 154 KNCRKTGHIARDCQNE 169
C ++GH+AR+C E
Sbjct: 159 YRCGESGHLARECTIE 174
Score = 243 (90.6 bits), Expect = 1.5e-24, Sum P(2) = 1.5e-24
Identities = 54/152 (35%), Positives = 75/152 (49%)
Query: 49 NLCNNCKRPGHFARECPNVAV----CNNCGLPGHIASE------CTTQARCWNCREPGHM 98
N C C R GH+ARECP + G G + + C+ C E GH+
Sbjct: 4 NECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHL 63
Query: 99 ASNCH-NEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADC--TNDKACKN 155
A +C E C++CG+ GH A+DC + + C NC KPGH+A DC +++ C +
Sbjct: 64 AKDCDLQEDACYNCGRGGHIAKDCKEPKRERE--QCCYNCGKPGHLARDCDHADEQKCYS 121
Query: 156 CRKTGHIARDCQNEPVCNLCNIAGHVARQCPK 187
C + GHI +DC + C C GHVA C K
Sbjct: 122 CGEFGHIQKDC-TKVKCYRCGETGHVAINCSK 152
Score = 197 (74.4 bits), Expect = 9.8e-16, P = 9.8e-16
Identities = 37/88 (42%), Positives = 54/88 (61%)
Query: 39 RETRRSFSQGNLCNNCKRPGHFARECPNV--AVCNNCGLPGHIASECTTQARCWNCREPG 96
+E +R Q C NC +PGH AR+C + C +CG GHI +CT + +C+ C E G
Sbjct: 88 KEPKREREQ--CCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCT-KVKCYRCGETG 144
Query: 97 HMASNCH--NEGICHSCGKTGHRARDCS 122
H+A NC +E C+ CG++GH AR+C+
Sbjct: 145 HVAINCSKTSEVNCYRCGESGHLARECT 172
Score = 156 (60.0 bits), Expect = 3.9e-19, Sum P(2) = 3.9e-19
Identities = 38/111 (34%), Positives = 49/111 (44%)
Query: 89 CWNCREPGHMASNCHNEGI----CHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIA 144
C+ C GH A C G S G+ G + D S +C C + GH+A
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTS-DRGFQFVSSSLPDICYRCGESGHLA 64
Query: 145 ADCT-NDKACKNCRKTGHIARDC-----QNEPVCNLCNIAGHVARQCPKGD 189
DC + AC NC + GHIA+DC + E C C GH+AR C D
Sbjct: 65 KDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHAD 115
Score = 103 (41.3 bits), Expect = 0.00076, P = 0.00076
Identities = 25/87 (28%), Positives = 33/87 (37%)
Query: 172 CNLCNIAGHVARQCPKGDSLXXXXXXXXXXXXXXXXXXXXXXXXXYVGYHDVICRSCNQM 231
C C +GH AR+CP G D IC C +
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSL----PD-ICYRCGES 60
Query: 232 GHMSRDCVGPLIICRNCGGRGHMAYEC 258
GH+++DC C NCG GH+A +C
Sbjct: 61 GHLAKDCDLQEDACYNCGRGGHIAKDC 87
Score = 87 (35.7 bits), Expect = 3.9e-19, Sum P(2) = 3.9e-19
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 225 CRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYEC 258
C SC + GH+ +DC + C CG GH+A C
Sbjct: 119 CYSCGEFGHIQKDCTK--VKCYRCGETGHVAINC 150
Score = 75 (31.5 bits), Expect = 7.0e-18, Sum P(2) = 7.0e-18
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 223 VICRSCNQMGHMSRDCVGPLII-CRNCGGRGHMAYEC 258
V C C + GH++ +C + C CG GH+A EC
Sbjct: 135 VKCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 171
Score = 52 (23.4 bits), Expect = 1.5e-24, Sum P(2) = 1.5e-24
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 222 DVICRSCNQMGHMSRDC 238
+V C C + GH++R+C
Sbjct: 155 EVNCYRCGESGHLAREC 171
>RGD|621807 [details] [associations]
symbol:Cnbp "CCHC-type zinc finger, nucleic acid binding protein"
species:10116 "Rattus norvegicus" [GO:0003697 "single-stranded DNA
binding" evidence=IDA] [GO:0003727 "single-stranded RNA binding"
evidence=IDA] [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005783
"endoplasmic reticulum" evidence=ISO;ISS] [GO:0005829 "cytosol"
evidence=ISO;ISS] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=ISO;ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO;ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO;ISS] InterPro:IPR001878 Pfam:PF00098
PROSITE:PS50158 SMART:SM00343 RGD:621807 GO:GO:0005783
GO:GO:0005829 GO:GO:0005634 GO:GO:0046872 GO:GO:0008284
GO:GO:0008270 GO:GO:0003727 GO:GO:0045944 GO:GO:0006351
GO:GO:0003697 eggNOG:COG5082 Gene3D:4.10.60.10 SUPFAM:SSF57756
HOGENOM:HOG000186262 KO:K09250 CTD:7555 HOVERGEN:HBG000397
OrthoDB:EOG45HRZN EMBL:D45254 EMBL:AF242550 EMBL:AY329624
EMBL:AB158421 EMBL:AB158422 EMBL:BC062225 IPI:IPI00201505
PIR:JC2512 RefSeq:NP_072120.1 UniGene:Rn.6187
ProteinModelPortal:P62634 SMR:P62634 STRING:P62634
PhosphoSite:P62634 PRIDE:P62634 GeneID:64530 KEGG:rno:64530
InParanoid:P62634 NextBio:613366 ArrayExpress:P62634
Genevestigator:P62634 GermOnline:ENSRNOG00000010239 Uniprot:P62634
Length = 177
Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 52/125 (41%), Positives = 70/125 (56%)
Query: 69 VCNNCGLPGHIASECTTQA-RCWNCREPGHMASNC-----HNEGICHSCGKTGHRARDCS 122
+C CG GH+A +C Q C+NC GH+A +C E C++CGK GH ARDC
Sbjct: 53 ICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCD 112
Query: 123 THVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCRKTGHIARDCQ--NEPVCNLCNIAGH 180
H D + C +C + GHI DCT K C C +TGH+A +C +E C C +GH
Sbjct: 113 -HA----DEQKCYSCGEFGHIQKDCTKVK-CYRCGETGHVAINCSKTSEVNCYRCGESGH 166
Query: 181 VARQC 185
+AR+C
Sbjct: 167 LAREC 171
Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 53/136 (38%), Positives = 76/136 (55%)
Query: 44 SFSQGNLCNNCKRPGHFARECP-NVAVCNNCGLPGHIASECTTQAR-----CWNCREPGH 97
S S ++C C GH A++C C NCG GHIA +C R C+NC +PGH
Sbjct: 47 SSSLPDICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGH 106
Query: 98 MASNC-H-NEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADC--TNDKAC 153
+A +C H +E C+SCG+ GH +DC T V+ C C + GH+A +C T++ C
Sbjct: 107 LARDCDHADEQKCYSCGEFGHIQKDC-TKVK-------CYRCGETGHVAINCSKTSEVNC 158
Query: 154 KNCRKTGHIARDCQNE 169
C ++GH+AR+C E
Sbjct: 159 YRCGESGHLARECTIE 174
Score = 243 (90.6 bits), Expect = 1.5e-24, Sum P(2) = 1.5e-24
Identities = 54/152 (35%), Positives = 75/152 (49%)
Query: 49 NLCNNCKRPGHFARECPNVAV----CNNCGLPGHIASE------CTTQARCWNCREPGHM 98
N C C R GH+ARECP + G G + + C+ C E GH+
Sbjct: 4 NECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHL 63
Query: 99 ASNCH-NEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADC--TNDKACKN 155
A +C E C++CG+ GH A+DC + + C NC KPGH+A DC +++ C +
Sbjct: 64 AKDCDLQEDACYNCGRGGHIAKDCKEPKRERE--QCCYNCGKPGHLARDCDHADEQKCYS 121
Query: 156 CRKTGHIARDCQNEPVCNLCNIAGHVARQCPK 187
C + GHI +DC + C C GHVA C K
Sbjct: 122 CGEFGHIQKDC-TKVKCYRCGETGHVAINCSK 152
Score = 197 (74.4 bits), Expect = 9.8e-16, P = 9.8e-16
Identities = 37/88 (42%), Positives = 54/88 (61%)
Query: 39 RETRRSFSQGNLCNNCKRPGHFARECPNV--AVCNNCGLPGHIASECTTQARCWNCREPG 96
+E +R Q C NC +PGH AR+C + C +CG GHI +CT + +C+ C E G
Sbjct: 88 KEPKREREQ--CCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCT-KVKCYRCGETG 144
Query: 97 HMASNCH--NEGICHSCGKTGHRARDCS 122
H+A NC +E C+ CG++GH AR+C+
Sbjct: 145 HVAINCSKTSEVNCYRCGESGHLARECT 172
Score = 156 (60.0 bits), Expect = 3.9e-19, Sum P(2) = 3.9e-19
Identities = 38/111 (34%), Positives = 49/111 (44%)
Query: 89 CWNCREPGHMASNCHNEGI----CHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIA 144
C+ C GH A C G S G+ G + D S +C C + GH+A
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTS-DRGFQFVSSSLPDICYRCGESGHLA 64
Query: 145 ADCT-NDKACKNCRKTGHIARDC-----QNEPVCNLCNIAGHVARQCPKGD 189
DC + AC NC + GHIA+DC + E C C GH+AR C D
Sbjct: 65 KDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHAD 115
Score = 103 (41.3 bits), Expect = 0.00076, P = 0.00076
Identities = 25/87 (28%), Positives = 33/87 (37%)
Query: 172 CNLCNIAGHVARQCPKGDSLXXXXXXXXXXXXXXXXXXXXXXXXXYVGYHDVICRSCNQM 231
C C +GH AR+CP G D IC C +
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSL----PD-ICYRCGES 60
Query: 232 GHMSRDCVGPLIICRNCGGRGHMAYEC 258
GH+++DC C NCG GH+A +C
Sbjct: 61 GHLAKDCDLQEDACYNCGRGGHIAKDC 87
Score = 87 (35.7 bits), Expect = 3.9e-19, Sum P(2) = 3.9e-19
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 225 CRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYEC 258
C SC + GH+ +DC + C CG GH+A C
Sbjct: 119 CYSCGEFGHIQKDCTK--VKCYRCGETGHVAINC 150
Score = 75 (31.5 bits), Expect = 7.0e-18, Sum P(2) = 7.0e-18
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 223 VICRSCNQMGHMSRDCVGPLII-CRNCGGRGHMAYEC 258
V C C + GH++ +C + C CG GH+A EC
Sbjct: 135 VKCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 171
Score = 52 (23.4 bits), Expect = 1.5e-24, Sum P(2) = 1.5e-24
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 222 DVICRSCNQMGHMSRDC 238
+V C C + GH++R+C
Sbjct: 155 EVNCYRCGESGHLAREC 171
>UNIPROTKB|P62634 [details] [associations]
symbol:Cnbp "Cellular nucleic acid-binding protein"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISS] InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158
SMART:SM00343 RGD:621807 GO:GO:0005783 GO:GO:0005829 GO:GO:0005634
GO:GO:0046872 GO:GO:0008284 GO:GO:0008270 GO:GO:0003727
GO:GO:0045944 GO:GO:0006351 GO:GO:0003697 eggNOG:COG5082
Gene3D:4.10.60.10 SUPFAM:SSF57756 HOGENOM:HOG000186262 KO:K09250
CTD:7555 HOVERGEN:HBG000397 OrthoDB:EOG45HRZN EMBL:D45254
EMBL:AF242550 EMBL:AY329624 EMBL:AB158421 EMBL:AB158422
EMBL:BC062225 IPI:IPI00201505 PIR:JC2512 RefSeq:NP_072120.1
UniGene:Rn.6187 ProteinModelPortal:P62634 SMR:P62634 STRING:P62634
PhosphoSite:P62634 PRIDE:P62634 GeneID:64530 KEGG:rno:64530
InParanoid:P62634 NextBio:613366 ArrayExpress:P62634
Genevestigator:P62634 GermOnline:ENSRNOG00000010239 Uniprot:P62634
Length = 177
Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 52/125 (41%), Positives = 70/125 (56%)
Query: 69 VCNNCGLPGHIASECTTQA-RCWNCREPGHMASNC-----HNEGICHSCGKTGHRARDCS 122
+C CG GH+A +C Q C+NC GH+A +C E C++CGK GH ARDC
Sbjct: 53 ICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCD 112
Query: 123 THVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCRKTGHIARDCQ--NEPVCNLCNIAGH 180
H D + C +C + GHI DCT K C C +TGH+A +C +E C C +GH
Sbjct: 113 -HA----DEQKCYSCGEFGHIQKDCTKVK-CYRCGETGHVAINCSKTSEVNCYRCGESGH 166
Query: 181 VARQC 185
+AR+C
Sbjct: 167 LAREC 171
Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 53/136 (38%), Positives = 76/136 (55%)
Query: 44 SFSQGNLCNNCKRPGHFARECP-NVAVCNNCGLPGHIASECTTQAR-----CWNCREPGH 97
S S ++C C GH A++C C NCG GHIA +C R C+NC +PGH
Sbjct: 47 SSSLPDICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGH 106
Query: 98 MASNC-H-NEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADC--TNDKAC 153
+A +C H +E C+SCG+ GH +DC T V+ C C + GH+A +C T++ C
Sbjct: 107 LARDCDHADEQKCYSCGEFGHIQKDC-TKVK-------CYRCGETGHVAINCSKTSEVNC 158
Query: 154 KNCRKTGHIARDCQNE 169
C ++GH+AR+C E
Sbjct: 159 YRCGESGHLARECTIE 174
Score = 243 (90.6 bits), Expect = 1.5e-24, Sum P(2) = 1.5e-24
Identities = 54/152 (35%), Positives = 75/152 (49%)
Query: 49 NLCNNCKRPGHFARECPNVAV----CNNCGLPGHIASE------CTTQARCWNCREPGHM 98
N C C R GH+ARECP + G G + + C+ C E GH+
Sbjct: 4 NECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHL 63
Query: 99 ASNCH-NEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADC--TNDKACKN 155
A +C E C++CG+ GH A+DC + + C NC KPGH+A DC +++ C +
Sbjct: 64 AKDCDLQEDACYNCGRGGHIAKDCKEPKRERE--QCCYNCGKPGHLARDCDHADEQKCYS 121
Query: 156 CRKTGHIARDCQNEPVCNLCNIAGHVARQCPK 187
C + GHI +DC + C C GHVA C K
Sbjct: 122 CGEFGHIQKDC-TKVKCYRCGETGHVAINCSK 152
Score = 197 (74.4 bits), Expect = 9.8e-16, P = 9.8e-16
Identities = 37/88 (42%), Positives = 54/88 (61%)
Query: 39 RETRRSFSQGNLCNNCKRPGHFARECPNV--AVCNNCGLPGHIASECTTQARCWNCREPG 96
+E +R Q C NC +PGH AR+C + C +CG GHI +CT + +C+ C E G
Sbjct: 88 KEPKREREQ--CCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCT-KVKCYRCGETG 144
Query: 97 HMASNCH--NEGICHSCGKTGHRARDCS 122
H+A NC +E C+ CG++GH AR+C+
Sbjct: 145 HVAINCSKTSEVNCYRCGESGHLARECT 172
Score = 156 (60.0 bits), Expect = 3.9e-19, Sum P(2) = 3.9e-19
Identities = 38/111 (34%), Positives = 49/111 (44%)
Query: 89 CWNCREPGHMASNCHNEGI----CHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIA 144
C+ C GH A C G S G+ G + D S +C C + GH+A
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTS-DRGFQFVSSSLPDICYRCGESGHLA 64
Query: 145 ADCT-NDKACKNCRKTGHIARDC-----QNEPVCNLCNIAGHVARQCPKGD 189
DC + AC NC + GHIA+DC + E C C GH+AR C D
Sbjct: 65 KDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHAD 115
Score = 103 (41.3 bits), Expect = 0.00076, P = 0.00076
Identities = 25/87 (28%), Positives = 33/87 (37%)
Query: 172 CNLCNIAGHVARQCPKGDSLXXXXXXXXXXXXXXXXXXXXXXXXXYVGYHDVICRSCNQM 231
C C +GH AR+CP G D IC C +
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSL----PD-ICYRCGES 60
Query: 232 GHMSRDCVGPLIICRNCGGRGHMAYEC 258
GH+++DC C NCG GH+A +C
Sbjct: 61 GHLAKDCDLQEDACYNCGRGGHIAKDC 87
Score = 87 (35.7 bits), Expect = 3.9e-19, Sum P(2) = 3.9e-19
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 225 CRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYEC 258
C SC + GH+ +DC + C CG GH+A C
Sbjct: 119 CYSCGEFGHIQKDCTK--VKCYRCGETGHVAINC 150
Score = 75 (31.5 bits), Expect = 7.0e-18, Sum P(2) = 7.0e-18
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 223 VICRSCNQMGHMSRDCVGPLII-CRNCGGRGHMAYEC 258
V C C + GH++ +C + C CG GH+A EC
Sbjct: 135 VKCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 171
Score = 52 (23.4 bits), Expect = 1.5e-24, Sum P(2) = 1.5e-24
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 222 DVICRSCNQMGHMSRDC 238
+V C C + GH++R+C
Sbjct: 155 EVNCYRCGESGHLAREC 171
>MGI|MGI:88431 [details] [associations]
symbol:Cnbp "cellular nucleic acid binding protein"
species:10090 "Mus musculus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=ISO] [GO:0003727
"single-stranded RNA binding" evidence=ISO] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
MGI:MGI:88431 GO:GO:0005783 GO:GO:0005829 GO:GO:0005634
GO:GO:0046872 GO:GO:0008284 GO:GO:0008270 GO:GO:0003727
GO:GO:0045944 GO:GO:0006351 GO:GO:0003697 eggNOG:COG5082
Gene3D:4.10.60.10 SUPFAM:SSF57756 HOGENOM:HOG000186262 KO:K09250
CTD:7555 HOVERGEN:HBG000397 ChiTaRS:CNBP EMBL:L12693 EMBL:Z11870
EMBL:X63866 EMBL:Z11871 EMBL:U20326 EMBL:AY176064 EMBL:AK075760
EMBL:AK078427 EMBL:BC058723 IPI:IPI00137229 IPI:IPI00330767
IPI:IPI00454151 PIR:I48297 PIR:I48298 PIR:I49259
RefSeq:NP_001103215.1 RefSeq:NP_038521.1 UniGene:Mm.290251
ProteinModelPortal:P53996 SMR:P53996 IntAct:P53996 STRING:P53996
PhosphoSite:P53996 PaxDb:P53996 PRIDE:P53996
Ensembl:ENSMUST00000032138 Ensembl:ENSMUST00000113619 GeneID:12785
KEGG:mmu:12785 InParanoid:P53996 OMA:CPNGQGG NextBio:282182
Bgee:P53996 CleanEx:MM_CNBP Genevestigator:P53996
GermOnline:ENSMUSG00000030057 Uniprot:P53996
Length = 178
Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 52/126 (41%), Positives = 70/126 (55%)
Query: 69 VCNNCGLPGHIASECTTQA--RCWNCREPGHMASNC-----HNEGICHSCGKTGHRARDC 121
+C CG GH+A +C Q C+NC GH+A +C E C++CGK GH ARDC
Sbjct: 53 ICYRCGESGHLAKDCDLQEDEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 112
Query: 122 STHVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCRKTGHIARDCQ--NEPVCNLCNIAG 179
H D + C +C + GHI DCT K C C +TGH+A +C +E C C +G
Sbjct: 113 D-HA----DEQKCYSCGEFGHIQKDCTKVK-CYRCGETGHVAINCSKTSEVNCYRCGESG 166
Query: 180 HVARQC 185
H+AR+C
Sbjct: 167 HLAREC 172
Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 53/137 (38%), Positives = 76/137 (55%)
Query: 44 SFSQGNLCNNCKRPGHFARECP--NVAVCNNCGLPGHIASECTTQAR-----CWNCREPG 96
S S ++C C GH A++C C NCG GHIA +C R C+NC +PG
Sbjct: 47 SSSLPDICYRCGESGHLAKDCDLQEDEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPG 106
Query: 97 HMASNC-H-NEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADC--TNDKA 152
H+A +C H +E C+SCG+ GH +DC T V+ C C + GH+A +C T++
Sbjct: 107 HLARDCDHADEQKCYSCGEFGHIQKDC-TKVK-------CYRCGETGHVAINCSKTSEVN 158
Query: 153 CKNCRKTGHIARDCQNE 169
C C ++GH+AR+C E
Sbjct: 159 CYRCGESGHLARECTIE 175
Score = 238 (88.8 bits), Expect = 4.9e-24, Sum P(2) = 4.9e-24
Identities = 53/153 (34%), Positives = 75/153 (49%)
Query: 49 NLCNNCKRPGHFARECPNVAV----CNNCGLPGHIASE------CTTQARCWNCREPGHM 98
N C C R GH+ARECP + G G + + C+ C E GH+
Sbjct: 4 NECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHL 63
Query: 99 ASNC--HNEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADC--TNDKACK 154
A +C + C++CG+ GH A+DC + + C NC KPGH+A DC +++ C
Sbjct: 64 AKDCDLQEDEACYNCGRGGHIAKDCKEPKRERE--QCCYNCGKPGHLARDCDHADEQKCY 121
Query: 155 NCRKTGHIARDCQNEPVCNLCNIAGHVARQCPK 187
+C + GHI +DC + C C GHVA C K
Sbjct: 122 SCGEFGHIQKDC-TKVKCYRCGETGHVAINCSK 153
Score = 197 (74.4 bits), Expect = 9.8e-16, P = 9.8e-16
Identities = 37/88 (42%), Positives = 54/88 (61%)
Query: 39 RETRRSFSQGNLCNNCKRPGHFARECPNV--AVCNNCGLPGHIASECTTQARCWNCREPG 96
+E +R Q C NC +PGH AR+C + C +CG GHI +CT + +C+ C E G
Sbjct: 89 KEPKREREQ--CCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCT-KVKCYRCGETG 145
Query: 97 HMASNCH--NEGICHSCGKTGHRARDCS 122
H+A NC +E C+ CG++GH AR+C+
Sbjct: 146 HVAINCSKTSEVNCYRCGESGHLARECT 173
Score = 160 (61.4 bits), Expect = 1.5e-19, Sum P(2) = 1.5e-19
Identities = 39/112 (34%), Positives = 50/112 (44%)
Query: 89 CWNCREPGHMASNCHNEGI----CHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIA 144
C+ C GH A C G S G+ G + D S +C C + GH+A
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTS-DRGFQFVSSSLPDICYRCGESGHLA 64
Query: 145 ADCT--NDKACKNCRKTGHIARDC-----QNEPVCNLCNIAGHVARQCPKGD 189
DC D+AC NC + GHIA+DC + E C C GH+AR C D
Sbjct: 65 KDCDLQEDEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHAD 116
Score = 87 (35.7 bits), Expect = 1.5e-19, Sum P(2) = 1.5e-19
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 225 CRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYEC 258
C SC + GH+ +DC + C CG GH+A C
Sbjct: 120 CYSCGEFGHIQKDCTK--VKCYRCGETGHVAINC 151
Score = 75 (31.5 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 223 VICRSCNQMGHMSRDCVGPLII-CRNCGGRGHMAYEC 258
V C C + GH++ +C + C CG GH+A EC
Sbjct: 136 VKCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 172
Score = 52 (23.4 bits), Expect = 4.9e-24, Sum P(2) = 4.9e-24
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 222 DVICRSCNQMGHMSRDC 238
+V C C + GH++R+C
Sbjct: 156 EVNCYRCGESGHLAREC 172
>UNIPROTKB|E2RPD7 [details] [associations]
symbol:CNBP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0008284
"positive regulation of cell proliferation" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR001878 Pfam:PF00098
PROSITE:PS50158 SMART:SM00343 GO:GO:0005783 GO:GO:0005829
GO:GO:0005634 GO:GO:0046872 GO:GO:0008284 GO:GO:0008270
GO:GO:0045944 GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
GeneTree:ENSGT00510000047065 OMA:CPNGQGG EMBL:AAEX03012021
UniGene:Cfa.4499 ProteinModelPortal:E2RPD7 PRIDE:E2RPD7
Ensembl:ENSCAFT00000006937 NextBio:20852160 Uniprot:E2RPD7
Length = 179
Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 54/138 (39%), Positives = 78/138 (56%)
Query: 44 SFSQGNLCNNCKRPGHFARECP---NVAVCNNCGLPGHIASECTTQAR-----CWNCREP 95
S S ++C C GH A++C +V C NCG GHIA +C R C+NC +P
Sbjct: 47 SSSLPDICYRCGESGHLAKDCDLQEDVEACYNCGRGGHIAKDCKEPKREREQCCYNCGKP 106
Query: 96 GHMASNC-H-NEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADC--TNDK 151
GH+A +C H +E C+SCG+ GH +DC T V+ C C + GH+A +C T++
Sbjct: 107 GHLARDCDHADEQKCYSCGEFGHIQKDC-TKVK-------CYRCGETGHVAINCSKTSEV 158
Query: 152 ACKNCRKTGHIARDCQNE 169
C C ++GH+AR+C E
Sbjct: 159 NCYRCGESGHLARECTIE 176
Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
Identities = 52/127 (40%), Positives = 70/127 (55%)
Query: 69 VCNNCGLPGHIASECTTQA---RCWNCREPGHMASNC-----HNEGICHSCGKTGHRARD 120
+C CG GH+A +C Q C+NC GH+A +C E C++CGK GH ARD
Sbjct: 53 ICYRCGESGHLAKDCDLQEDVEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARD 112
Query: 121 CSTHVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCRKTGHIARDCQ--NEPVCNLCNIA 178
C H D + C +C + GHI DCT K C C +TGH+A +C +E C C +
Sbjct: 113 CD-HA----DEQKCYSCGEFGHIQKDCTKVK-CYRCGETGHVAINCSKTSEVNCYRCGES 166
Query: 179 GHVARQC 185
GH+AR+C
Sbjct: 167 GHLAREC 173
Score = 236 (88.1 bits), Expect = 7.9e-24, Sum P(2) = 7.9e-24
Identities = 54/154 (35%), Positives = 76/154 (49%)
Query: 49 NLCNNCKRPGHFARECPNVAV----CNNCGLPGHIASE------CTTQARCWNCREPGHM 98
N C C R GH+ARECP + G G + + C+ C E GH+
Sbjct: 4 NECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHL 63
Query: 99 ASNCH-NEGI--CHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADC--TNDKAC 153
A +C E + C++CG+ GH A+DC + + C NC KPGH+A DC +++ C
Sbjct: 64 AKDCDLQEDVEACYNCGRGGHIAKDCKEPKRERE--QCCYNCGKPGHLARDCDHADEQKC 121
Query: 154 KNCRKTGHIARDCQNEPVCNLCNIAGHVARQCPK 187
+C + GHI +DC + C C GHVA C K
Sbjct: 122 YSCGEFGHIQKDC-TKVKCYRCGETGHVAINCSK 154
Score = 197 (74.4 bits), Expect = 9.8e-16, P = 9.8e-16
Identities = 37/88 (42%), Positives = 54/88 (61%)
Query: 39 RETRRSFSQGNLCNNCKRPGHFARECPNV--AVCNNCGLPGHIASECTTQARCWNCREPG 96
+E +R Q C NC +PGH AR+C + C +CG GHI +CT + +C+ C E G
Sbjct: 90 KEPKREREQ--CCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCT-KVKCYRCGETG 146
Query: 97 HMASNCH--NEGICHSCGKTGHRARDCS 122
H+A NC +E C+ CG++GH AR+C+
Sbjct: 147 HVAINCSKTSEVNCYRCGESGHLARECT 174
Score = 151 (58.2 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 39/113 (34%), Positives = 50/113 (44%)
Query: 89 CWNCREPGHMASNCHNEGI----CHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIA 144
C+ C GH A C G S G+ G + D S +C C + GH+A
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTS-DRGFQFVSSSLPDICYRCGESGHLA 64
Query: 145 ADCT--ND-KACKNCRKTGHIARDC-----QNEPVCNLCNIAGHVARQCPKGD 189
DC D +AC NC + GHIA+DC + E C C GH+AR C D
Sbjct: 65 KDCDLQEDVEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHAD 117
Score = 87 (35.7 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 225 CRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYEC 258
C SC + GH+ +DC + C CG GH+A C
Sbjct: 121 CYSCGEFGHIQKDCTK--VKCYRCGETGHVAINC 152
Score = 75 (31.5 bits), Expect = 2.3e-17, Sum P(2) = 2.3e-17
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 223 VICRSCNQMGHMSRDCVGPLII-CRNCGGRGHMAYEC 258
V C C + GH++ +C + C CG GH+A EC
Sbjct: 137 VKCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 173
Score = 52 (23.4 bits), Expect = 7.9e-24, Sum P(2) = 7.9e-24
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 222 DVICRSCNQMGHMSRDC 238
+V C C + GH++R+C
Sbjct: 157 EVNCYRCGESGHLAREC 173
>UNIPROTKB|F8WFK2 [details] [associations]
symbol:Cnbp "Cellular nucleic acid-binding protein"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
RGD:621807 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
Gene3D:4.10.60.10 SUPFAM:SSF57756 GeneTree:ENSGT00510000047065
IPI:IPI00201505 ProteinModelPortal:F8WFK2 SMR:F8WFK2
Ensembl:ENSRNOT00000013884 Uniprot:F8WFK2
Length = 179
Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 54/138 (39%), Positives = 78/138 (56%)
Query: 44 SFSQGNLCNNCKRPGHFARECP---NVAVCNNCGLPGHIASECTTQAR-----CWNCREP 95
S S ++C C GH A++C +V C NCG GHIA +C R C+NC +P
Sbjct: 47 SSSLPDICYRCGESGHLAKDCDLQEDVEACYNCGRGGHIAKDCKEPKREREQCCYNCGKP 106
Query: 96 GHMASNC-H-NEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADC--TNDK 151
GH+A +C H +E C+SCG+ GH +DC T V+ C C + GH+A +C T++
Sbjct: 107 GHLARDCDHADEQKCYSCGEFGHIQKDC-TKVK-------CYRCGETGHVAINCSKTSEV 158
Query: 152 ACKNCRKTGHIARDCQNE 169
C C ++GH+AR+C E
Sbjct: 159 NCYRCGESGHLARECTIE 176
Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
Identities = 52/127 (40%), Positives = 70/127 (55%)
Query: 69 VCNNCGLPGHIASECTTQA---RCWNCREPGHMASNC-----HNEGICHSCGKTGHRARD 120
+C CG GH+A +C Q C+NC GH+A +C E C++CGK GH ARD
Sbjct: 53 ICYRCGESGHLAKDCDLQEDVEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARD 112
Query: 121 CSTHVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCRKTGHIARDCQ--NEPVCNLCNIA 178
C H D + C +C + GHI DCT K C C +TGH+A +C +E C C +
Sbjct: 113 CD-HA----DEQKCYSCGEFGHIQKDCTKVK-CYRCGETGHVAINCSKTSEVNCYRCGES 166
Query: 179 GHVARQC 185
GH+AR+C
Sbjct: 167 GHLAREC 173
Score = 236 (88.1 bits), Expect = 7.9e-24, Sum P(2) = 7.9e-24
Identities = 54/154 (35%), Positives = 76/154 (49%)
Query: 49 NLCNNCKRPGHFARECPNVAV----CNNCGLPGHIASE------CTTQARCWNCREPGHM 98
N C C R GH+ARECP + G G + + C+ C E GH+
Sbjct: 4 NECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHL 63
Query: 99 ASNCH-NEGI--CHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADC--TNDKAC 153
A +C E + C++CG+ GH A+DC + + C NC KPGH+A DC +++ C
Sbjct: 64 AKDCDLQEDVEACYNCGRGGHIAKDCKEPKRERE--QCCYNCGKPGHLARDCDHADEQKC 121
Query: 154 KNCRKTGHIARDCQNEPVCNLCNIAGHVARQCPK 187
+C + GHI +DC + C C GHVA C K
Sbjct: 122 YSCGEFGHIQKDC-TKVKCYRCGETGHVAINCSK 154
Score = 197 (74.4 bits), Expect = 9.8e-16, P = 9.8e-16
Identities = 37/88 (42%), Positives = 54/88 (61%)
Query: 39 RETRRSFSQGNLCNNCKRPGHFARECPNV--AVCNNCGLPGHIASECTTQARCWNCREPG 96
+E +R Q C NC +PGH AR+C + C +CG GHI +CT + +C+ C E G
Sbjct: 90 KEPKREREQ--CCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCT-KVKCYRCGETG 146
Query: 97 HMASNCH--NEGICHSCGKTGHRARDCS 122
H+A NC +E C+ CG++GH AR+C+
Sbjct: 147 HVAINCSKTSEVNCYRCGESGHLARECT 174
Score = 151 (58.2 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 39/113 (34%), Positives = 50/113 (44%)
Query: 89 CWNCREPGHMASNCHNEGI----CHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIA 144
C+ C GH A C G S G+ G + D S +C C + GH+A
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTS-DRGFQFVSSSLPDICYRCGESGHLA 64
Query: 145 ADCT--ND-KACKNCRKTGHIARDC-----QNEPVCNLCNIAGHVARQCPKGD 189
DC D +AC NC + GHIA+DC + E C C GH+AR C D
Sbjct: 65 KDCDLQEDVEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHAD 117
Score = 87 (35.7 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 225 CRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYEC 258
C SC + GH+ +DC + C CG GH+A C
Sbjct: 121 CYSCGEFGHIQKDCTK--VKCYRCGETGHVAINC 152
Score = 75 (31.5 bits), Expect = 2.3e-17, Sum P(2) = 2.3e-17
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 223 VICRSCNQMGHMSRDCVGPLII-CRNCGGRGHMAYEC 258
V C C + GH++ +C + C CG GH+A EC
Sbjct: 137 VKCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 173
Score = 52 (23.4 bits), Expect = 7.9e-24, Sum P(2) = 7.9e-24
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 222 DVICRSCNQMGHMSRDC 238
+V C C + GH++R+C
Sbjct: 157 EVNCYRCGESGHLAREC 173
>CGD|CAL0002417 [details] [associations]
symbol:GIS2 species:5476 "Candida albicans" [GO:0070417
"cellular response to cold" evidence=IMP] [GO:0003676 "nucleic acid
binding" evidence=NAS] [GO:0071470 "cellular response to osmotic
stress" evidence=IMP] [GO:0035690 "cellular response to drug"
evidence=IMP] [GO:0042788 "polysomal ribosome" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000747 "conjugation with cellular fusion"
evidence=IEA] [GO:0031137 "regulation of conjugation with cellular
fusion" evidence=IEA] [GO:0045727 "positive regulation of
translation" evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IEA] [GO:0045182
"translation regulator activity" evidence=IEA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 CGD:CAL0002417
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 GO:GO:0035690
EMBL:AACQ01000100 EMBL:AACQ01000097 GO:GO:0071470 GO:GO:0070417
eggNOG:COG5082 Gene3D:4.10.60.10 SUPFAM:SSF57756
HOGENOM:HOG000186262 KO:K09250 RefSeq:XP_714599.1
RefSeq:XP_714730.1 ProteinModelPortal:Q59YJ9 STRING:Q59YJ9
GeneID:3643638 GeneID:3643744 KEGG:cal:CaO19.10692
KEGG:cal:CaO19.3182 Uniprot:Q59YJ9
Length = 175
Score = 223 (83.6 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 51/153 (33%), Positives = 74/153 (48%)
Query: 50 LCNNCKRPGHFARECP----NVAV-CNNCGLPGHIASECTTQA---RCWNCREPGHMASN 101
LC NC +PGH + +CP N A C +CG GHI +EC QA +C+NC + GH++ N
Sbjct: 28 LCYNCHKPGHESNDCPDPKQNTAKQCYSCGDVGHIQTECPNQAQGAKCYNCGQFGHISKN 87
Query: 102 CHNEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADC-TNDKACKNCRKTG 160
C + + T + ++ G C C P H A DC N C C K G
Sbjct: 88 CDS-----APSSTNNAPSFKRPSGRASGTT--CYKCGGPNHFARDCQANTVKCYACGKVG 140
Query: 161 HIARDCQNEP--------VCNLCNIAGHVARQC 185
HI++DC + C C +GH++++C
Sbjct: 141 HISKDCHSSAGGSNFSAKTCYNCGKSGHISKEC 173
Score = 206 (77.6 bits), Expect = 1.0e-23, Sum P(2) = 1.0e-23
Identities = 45/145 (31%), Positives = 71/145 (48%)
Query: 51 CNNCKRPGHFARECPNVA-VCNNCGLPGHIASEC-----TTQARCWNCREPGHMASNCHN 104
C C GH A +C +C NC PGH +++C T +C++C + GH+ + C N
Sbjct: 9 CYKCGEVGHVADDCQQEERLCYNCHKPGHESNDCPDPKQNTAKQCYSCGDVGHIQTECPN 68
Query: 105 E--GI-CHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCRKTGH 161
+ G C++CG+ GH +++C + S + + +P A+ T C C H
Sbjct: 69 QAQGAKCYNCGQFGHISKNCDSAPSSTNN---APSFKRPSGRASGTT----CYKCGGPNH 121
Query: 162 IARDCQNEPV-CNLCNIAGHVARQC 185
ARDCQ V C C GH+++ C
Sbjct: 122 FARDCQANTVKCYACGKVGHISKDC 146
Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 36/107 (33%), Positives = 53/107 (49%)
Query: 46 SQGNLCNNCKRPGHFARECPNVAVCNNCGLPGHIASECTTQARCWNCREPGHMASNCHNE 105
+QG C NC + GH ++ C + N S + C+ C P H A +C
Sbjct: 70 AQGAKCYNCGQFGHISKNCDSAPSSTNNAPSFKRPSGRASGTTCYKCGGPNHFARDCQAN 129
Query: 106 GI-CHSCGKTGHRARDCSTHVQSGGD---LRLCNNCYKPGHIAADCT 148
+ C++CGK GH ++DC H +GG + C NC K GHI+ +CT
Sbjct: 130 TVKCYACGKVGHISKDC--HSSAGGSNFSAKTCYNCGKSGHISKECT 174
Score = 161 (61.7 bits), Expect = 5.0e-19, Sum P(2) = 5.0e-19
Identities = 33/91 (36%), Positives = 45/91 (49%)
Query: 108 CHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKA-----CKNCRKTGHI 162
C+ CG+ GH A DC + RLC NC+KPGH + DC + K C +C GHI
Sbjct: 9 CYKCGEVGHVADDCQQ------EERLCYNCHKPGHESNDCPDPKQNTAKQCYSCGDVGHI 62
Query: 163 ARDCQNEPV---CNLCNIAGHVARQCPKGDS 190
+C N+ C C GH+++ C S
Sbjct: 63 QTECPNQAQGAKCYNCGQFGHISKNCDSAPS 93
Score = 123 (48.4 bits), Expect = 5.6e-13, Sum P(2) = 5.6e-13
Identities = 24/61 (39%), Positives = 31/61 (50%)
Query: 132 RLCNNCYKPGHIAADCTND-KACKNCRKTGHIARDC----QNEPV-CNLCNIAGHVARQC 185
R C C + GH+A DC + + C NC K GH + DC QN C C GH+ +C
Sbjct: 7 RTCYKCGEVGHVADDCQQEERLCYNCHKPGHESNDCPDPKQNTAKQCYSCGDVGHIQTEC 66
Query: 186 P 186
P
Sbjct: 67 P 67
Score = 81 (33.6 bits), Expect = 1.0e-23, Sum P(2) = 1.0e-23
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 223 VICRSCNQMGHMSRDC---VG----PLIICRNCGGRGHMAYEC 258
V C +C ++GH+S+DC G C NCG GH++ EC
Sbjct: 131 VKCYACGKVGHISKDCHSSAGGSNFSAKTCYNCGKSGHISKEC 173
Score = 78 (32.5 bits), Expect = 1.0e-18, Sum P(2) = 1.0e-18
Identities = 13/36 (36%), Positives = 18/36 (50%)
Query: 225 CRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYECPS 260
C C H +RDC + C CG GH++ +C S
Sbjct: 113 CYKCGGPNHFARDCQANTVKCYACGKVGHISKDCHS 148
Score = 49 (22.3 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 245 CRNCGGRGHMAYECPSGRI 263
C CGG H A +C + +
Sbjct: 113 CYKCGGPNHFARDCQANTV 131
>UNIPROTKB|Q59YJ9 [details] [associations]
symbol:GIS2 "Putative uncharacterized protein GIS2"
species:237561 "Candida albicans SC5314" [GO:0003676 "nucleic acid
binding" evidence=NAS] [GO:0035690 "cellular response to drug"
evidence=IMP] [GO:0070417 "cellular response to cold" evidence=IMP]
[GO:0071470 "cellular response to osmotic stress" evidence=IMP]
InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
CGD:CAL0002417 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
GO:GO:0035690 EMBL:AACQ01000100 EMBL:AACQ01000097 GO:GO:0071470
GO:GO:0070417 eggNOG:COG5082 Gene3D:4.10.60.10 SUPFAM:SSF57756
HOGENOM:HOG000186262 KO:K09250 RefSeq:XP_714599.1
RefSeq:XP_714730.1 ProteinModelPortal:Q59YJ9 STRING:Q59YJ9
GeneID:3643638 GeneID:3643744 KEGG:cal:CaO19.10692
KEGG:cal:CaO19.3182 Uniprot:Q59YJ9
Length = 175
Score = 223 (83.6 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 51/153 (33%), Positives = 74/153 (48%)
Query: 50 LCNNCKRPGHFARECP----NVAV-CNNCGLPGHIASECTTQA---RCWNCREPGHMASN 101
LC NC +PGH + +CP N A C +CG GHI +EC QA +C+NC + GH++ N
Sbjct: 28 LCYNCHKPGHESNDCPDPKQNTAKQCYSCGDVGHIQTECPNQAQGAKCYNCGQFGHISKN 87
Query: 102 CHNEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADC-TNDKACKNCRKTG 160
C + + T + ++ G C C P H A DC N C C K G
Sbjct: 88 CDS-----APSSTNNAPSFKRPSGRASGTT--CYKCGGPNHFARDCQANTVKCYACGKVG 140
Query: 161 HIARDCQNEP--------VCNLCNIAGHVARQC 185
HI++DC + C C +GH++++C
Sbjct: 141 HISKDCHSSAGGSNFSAKTCYNCGKSGHISKEC 173
Score = 206 (77.6 bits), Expect = 1.0e-23, Sum P(2) = 1.0e-23
Identities = 45/145 (31%), Positives = 71/145 (48%)
Query: 51 CNNCKRPGHFARECPNVA-VCNNCGLPGHIASEC-----TTQARCWNCREPGHMASNCHN 104
C C GH A +C +C NC PGH +++C T +C++C + GH+ + C N
Sbjct: 9 CYKCGEVGHVADDCQQEERLCYNCHKPGHESNDCPDPKQNTAKQCYSCGDVGHIQTECPN 68
Query: 105 E--GI-CHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCRKTGH 161
+ G C++CG+ GH +++C + S + + +P A+ T C C H
Sbjct: 69 QAQGAKCYNCGQFGHISKNCDSAPSSTNN---APSFKRPSGRASGTT----CYKCGGPNH 121
Query: 162 IARDCQNEPV-CNLCNIAGHVARQC 185
ARDCQ V C C GH+++ C
Sbjct: 122 FARDCQANTVKCYACGKVGHISKDC 146
Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 36/107 (33%), Positives = 53/107 (49%)
Query: 46 SQGNLCNNCKRPGHFARECPNVAVCNNCGLPGHIASECTTQARCWNCREPGHMASNCHNE 105
+QG C NC + GH ++ C + N S + C+ C P H A +C
Sbjct: 70 AQGAKCYNCGQFGHISKNCDSAPSSTNNAPSFKRPSGRASGTTCYKCGGPNHFARDCQAN 129
Query: 106 GI-CHSCGKTGHRARDCSTHVQSGGD---LRLCNNCYKPGHIAADCT 148
+ C++CGK GH ++DC H +GG + C NC K GHI+ +CT
Sbjct: 130 TVKCYACGKVGHISKDC--HSSAGGSNFSAKTCYNCGKSGHISKECT 174
Score = 161 (61.7 bits), Expect = 5.0e-19, Sum P(2) = 5.0e-19
Identities = 33/91 (36%), Positives = 45/91 (49%)
Query: 108 CHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKA-----CKNCRKTGHI 162
C+ CG+ GH A DC + RLC NC+KPGH + DC + K C +C GHI
Sbjct: 9 CYKCGEVGHVADDCQQ------EERLCYNCHKPGHESNDCPDPKQNTAKQCYSCGDVGHI 62
Query: 163 ARDCQNEPV---CNLCNIAGHVARQCPKGDS 190
+C N+ C C GH+++ C S
Sbjct: 63 QTECPNQAQGAKCYNCGQFGHISKNCDSAPS 93
Score = 123 (48.4 bits), Expect = 5.6e-13, Sum P(2) = 5.6e-13
Identities = 24/61 (39%), Positives = 31/61 (50%)
Query: 132 RLCNNCYKPGHIAADCTND-KACKNCRKTGHIARDC----QNEPV-CNLCNIAGHVARQC 185
R C C + GH+A DC + + C NC K GH + DC QN C C GH+ +C
Sbjct: 7 RTCYKCGEVGHVADDCQQEERLCYNCHKPGHESNDCPDPKQNTAKQCYSCGDVGHIQTEC 66
Query: 186 P 186
P
Sbjct: 67 P 67
Score = 81 (33.6 bits), Expect = 1.0e-23, Sum P(2) = 1.0e-23
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 223 VICRSCNQMGHMSRDC---VG----PLIICRNCGGRGHMAYEC 258
V C +C ++GH+S+DC G C NCG GH++ EC
Sbjct: 131 VKCYACGKVGHISKDCHSSAGGSNFSAKTCYNCGKSGHISKEC 173
Score = 78 (32.5 bits), Expect = 1.0e-18, Sum P(2) = 1.0e-18
Identities = 13/36 (36%), Positives = 18/36 (50%)
Query: 225 CRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYECPS 260
C C H +RDC + C CG GH++ +C S
Sbjct: 113 CYKCGGPNHFARDCQANTVKCYACGKVGHISKDCHS 148
Score = 49 (22.3 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 245 CRNCGGRGHMAYECPSGRI 263
C CGG H A +C + +
Sbjct: 113 CYKCGGPNHFARDCQANTV 131
>ASPGD|ASPL0000040986 [details] [associations]
symbol:AN9093 species:162425 "Emericella nidulans"
[GO:0045727 "positive regulation of translation" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IEA] [GO:0003729
"mRNA binding" evidence=IEA] [GO:0045182 "translation regulator
activity" evidence=IEA] [GO:0010494 "cytoplasmic stress granule"
evidence=IEA] [GO:0042788 "polysomal ribosome" evidence=IEA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 GO:GO:0046872
GO:GO:0008270 EMBL:BN001306 GO:GO:0003676 Gene3D:4.10.60.10
SUPFAM:SSF57756 HOGENOM:HOG000186262 EnsemblFungi:CADANIAT00009521
OMA:QAGHISR Uniprot:C8VH53
Length = 233
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 62/171 (36%), Positives = 77/171 (45%)
Query: 46 SQGNLCNNCKRPGHFARECPNVAV-----CNNC-GLPGHIASECTT------QARCWNCR 93
S LC NCK+PGH + CP C NC GL GH+ ++C T RC+NC
Sbjct: 23 SSERLCYNCKQPGHESSSCPRPRTTETKQCYNCQGL-GHVQADCPTLRLNGANGRCYNCS 81
Query: 94 EPGHMASNCHNEGICHSCGKTGHRARDCSTHVQSG-GDLRLCNNCYK---PGHIAADC-T 148
+PGH+A NC G TG + G G CYK P H A DC
Sbjct: 82 QPGHLARNCPAPASGAPRG-TGAPRGGFGGGFRGGYGGYPRAATCYKCGGPNHFARDCQA 140
Query: 149 NDKACKNCRKTGHIARDC---QNEP------VCNLCNIAGHVARQCPKGDS 190
C C K GHI+RDC P VC C+ AGH++R CP ++
Sbjct: 141 QAMKCYACGKLGHISRDCTAPNGGPLSSAGKVCYKCSQAGHISRDCPNNEA 191
Score = 201 (75.8 bits), Expect = 3.7e-16, P = 3.7e-16
Identities = 52/168 (30%), Positives = 68/168 (40%)
Query: 108 CHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADC-----TNDKACKNCRKTGHI 162
C+ CG GH A CS+ RLC NC +PGH ++ C T K C NC+ GH+
Sbjct: 8 CYKCGNIGHYAEVCSSSE------RLCYNCKQPGHESSSCPRPRTTETKQCYNCQGLGHV 61
Query: 163 ARDCQNEPV------CNLCNIAGHVARQCPKGDSLXXXXXXXXXXXXXXXXXXXXXXXXX 216
DC + C C+ GH+AR CP S
Sbjct: 62 QADCPTLRLNGANGRCYNCSQPGHLARNCPAPAS------GAPRGTGAPRGGFGGGFRGG 115
Query: 217 YVGY-HDVICRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYEC--PSG 261
Y GY C C H +RDC + C CG GH++ +C P+G
Sbjct: 116 YGGYPRAATCYKCGGPNHFARDCQAQAMKCYACGKLGHISRDCTAPNG 163
Score = 192 (72.6 bits), Expect = 1.6e-23, Sum P(2) = 1.6e-23
Identities = 48/152 (31%), Positives = 69/152 (45%)
Query: 51 CNNCKRPGHFARECPNVA-VCNNCGLPGHIASEC----TTQAR-CWNCREPGHMASNCHN 104
C C GH+A C + +C NC PGH +S C TT+ + C+NC+ GH+ ++C
Sbjct: 8 CYKCGNIGHYAEVCSSSERLCYNCKQPGHESSSCPRPRTTETKQCYNCQGLGHVQADCPT 67
Query: 105 ------EGICHSCGKTGHRARDCSTHVQSGGD--LRLCNNCYKPGHIAADCTNDKA--CK 154
G C++C + GH AR+C SG + G +A C
Sbjct: 68 LRLNGANGRCYNCSQPGHLARNCPAPA-SGAPRGTGAPRGGFGGGFRGGYGGYPRAATCY 126
Query: 155 NCRKTGHIARDCQNEPV-CNLCNIAGHVARQC 185
C H ARDCQ + + C C GH++R C
Sbjct: 127 KCGGPNHFARDCQAQAMKCYACGKLGHISRDC 158
Score = 95 (38.5 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 20/61 (32%), Positives = 27/61 (44%)
Query: 132 RLCNNCYKPGHIAADCTN-DKACKNCRKTGHIARDCQNEPV-----CNLCNIAGHVARQC 185
R C C GH A C++ ++ C NC++ GH + C C C GHV C
Sbjct: 6 RACYKCGNIGHYAEVCSSSERLCYNCKQPGHESSSCPRPRTTETKQCYNCQGLGHVQADC 65
Query: 186 P 186
P
Sbjct: 66 P 66
Score = 93 (37.8 bits), Expect = 1.6e-23, Sum P(2) = 1.6e-23
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 225 CRSCNQMGHMSRDCV----GPLI----ICRNCGGRGHMAYECPS 260
C +C ++GH+SRDC GPL +C C GH++ +CP+
Sbjct: 145 CYACGKLGHISRDCTAPNGGPLSSAGKVCYKCSQAGHISRDCPN 188
Score = 77 (32.2 bits), Expect = 8.8e-07, Sum P(2) = 8.8e-07
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 151 KACKNCRKTGHIARDCQN-EPVCNLCNIAGHVARQCPK 187
+AC C GH A C + E +C C GH + CP+
Sbjct: 6 RACYKCGNIGHYAEVCSSSERLCYNCKQPGHESSSCPR 43
Score = 63 (27.2 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
Identities = 9/15 (60%), Positives = 12/15 (80%)
Query: 224 ICRSCNQMGHMSRDC 238
+C C+Q GH+SRDC
Sbjct: 172 VCYKCSQAGHISRDC 186
>ZFIN|ZDB-GENE-030131-7782 [details] [associations]
symbol:cnbpb "CCHC-type zinc finger, nucleic acid
binding protein b" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
ZFIN:ZDB-GENE-030131-7782 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
Gene3D:4.10.60.10 SUPFAM:SSF57756 GeneTree:ENSGT00510000047065
InterPro:IPR025836 Pfam:PF14392 EMBL:CR855375 IPI:IPI00862287
Ensembl:ENSDART00000104520 Bgee:E7FCQ0 Uniprot:E7FCQ0
Length = 243
Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 53/146 (36%), Positives = 72/146 (49%)
Query: 49 NLCNNCKRPGHFARECPNVAVCNNCGLPGHIASECTTQARCWNCREPGHMASNCHN-EGI 107
N C C R GH+ + CPN G G C+ C EPGH+A +C E
Sbjct: 86 NECFGCGRTGHWIKNCPNAGRGRGKGR-GR-----GKDLFCYRCGEPGHVARDCERTEDA 139
Query: 108 CHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADC--TNDKACKNCRKTGHIARD 165
C++CG+ GH +RDC + ++C NC K GH+A DC N++ C +C GHI +
Sbjct: 140 CYNCGRGGHISRDCKEPKKERE--QVCYNCGKAGHMARDCDHANEQKCYSCGGFGHIQKG 197
Query: 166 CQNEPVCNLCNIAGHVARQCPKGDSL 191
C+ C C GHVA QC K +
Sbjct: 198 CEKVK-CYRCGEIGHVAVQCSKASEV 222
Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 50/129 (38%), Positives = 69/129 (53%)
Query: 51 CNNCKRPGHFARECPNVA-VCNNCGLPGHIASECTTQAR-----CWNCREPGHMASNC-H 103
C C PGH AR+C C NCG GHI+ +C + C+NC + GHMA +C H
Sbjct: 120 CYRCGEPGHVARDCERTEDACYNCGRGGHISRDCKEPKKEREQVCYNCGKAGHMARDCDH 179
Query: 104 -NEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCT--NDKACKNCRKTG 160
NE C+SCG GH +Q G + C C + GH+A C+ ++ C NC K+G
Sbjct: 180 ANEQKCYSCGGFGH--------IQKGCEKVKCYRCGEIGHVAVQCSKASEVNCYNCGKSG 231
Query: 161 HIARDCQNE 169
H+A++C E
Sbjct: 232 HVAKECTIE 240
Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 48/124 (38%), Positives = 66/124 (53%)
Query: 70 CNNCGLPGHIASECT-TQARCWNCREPGHMASNC-----HNEGICHSCGKTGHRARDCST 123
C CG PGH+A +C T+ C+NC GH++ +C E +C++CGK GH ARDC
Sbjct: 120 CYRCGEPGHVARDCERTEDACYNCGRGGHISRDCKEPKKEREQVCYNCGKAGHMARDCD- 178
Query: 124 HVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCRKTGHIARDCQ--NEPVCNLCNIAGHV 181
H + C +C GHI C K C C + GH+A C +E C C +GHV
Sbjct: 179 HANE----QKCYSCGGFGHIQKGCEKVK-CYRCGEIGHVAVQCSKASEVNCYNCGKSGHV 233
Query: 182 ARQC 185
A++C
Sbjct: 234 AKEC 237
Score = 198 (74.8 bits), Expect = 2.6e-23, Sum P(2) = 2.6e-23
Identities = 46/129 (35%), Positives = 57/129 (44%)
Query: 79 IASECTTQARCWNCREPGHMASNCHNEG-------------ICHSCGKTGHRARDCSTHV 125
+ SE + C+ C GH NC N G C+ CG+ GH ARDC
Sbjct: 78 VKSEDMSSNECFGCGRTGHWIKNCPNAGRGRGKGRGRGKDLFCYRCGEPGHVARDCERTE 137
Query: 126 QSGGDLRLCNNCYKPGHIAADCTNDK-----ACKNCRKTGHIARDCQ--NEPVCNLCNIA 178
+ C NC + GHI+ DC K C NC K GH+ARDC NE C C
Sbjct: 138 DA------CYNCGRGGHISRDCKEPKKEREQVCYNCGKAGHMARDCDHANEQKCYSCGGF 191
Query: 179 GHVARQCPK 187
GH+ + C K
Sbjct: 192 GHIQKGCEK 200
Score = 174 (66.3 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 34/88 (38%), Positives = 52/88 (59%)
Query: 39 RETRRSFSQGNLCNNCKRPGHFARECP--NVAVCNNCGLPGHIASECTTQARCWNCREPG 96
+E ++ Q +C NC + GH AR+C N C +CG GHI C + +C+ C E G
Sbjct: 154 KEPKKEREQ--VCYNCGKAGHMARDCDHANEQKCYSCGGFGHIQKGCE-KVKCYRCGEIG 210
Query: 97 HMASNCH--NEGICHSCGKTGHRARDCS 122
H+A C +E C++CGK+GH A++C+
Sbjct: 211 HVAVQCSKASEVNCYNCGKSGHVAKECT 238
Score = 85 (35.0 bits), Expect = 2.6e-23, Sum P(2) = 2.6e-23
Identities = 16/41 (39%), Positives = 22/41 (53%)
Query: 219 GYHDVICRSCNQMGHMSRDCV-GPLIICRNCGGRGHMAYEC 258
G V C C ++GH++ C + C NCG GH+A EC
Sbjct: 197 GCEKVKCYRCGEIGHVAVQCSKASEVNCYNCGKSGHVAKEC 237
>UNIPROTKB|G4N4A8 [details] [associations]
symbol:MGG_05948 "Zinc knuckle domain-containing protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158
SMART:SM00343 EMBL:CM001233 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756 KO:K09250
RefSeq:XP_003711783.1 ProteinModelPortal:G4N4A8
EnsemblFungi:MGG_05948T0 GeneID:2684027 KEGG:mgr:MGG_05948
Uniprot:G4N4A8
Length = 199
Score = 220 (82.5 bits), Expect = 3.6e-18, P = 3.6e-18
Identities = 49/144 (34%), Positives = 66/144 (45%)
Query: 50 LCNNCKRPGHFARECPNVAVCNNCGLPGHIASECTTQARCWNCREPGHMASNCHNEGICH 109
+C C +PGH +R+CP+ G G +S A C+ C E GH+A NC G
Sbjct: 59 ICYRCSQPGHISRDCPSGGAGGGGGGGGGQSSG----AECYKCGEVGHIARNCSKGGYGG 114
Query: 110 SCGKTGHRARDCSTHVQSGGDL--RLCNNCYKPGHIAADCTNDKACKNCRKTGHIARDCQ 167
G G+ GG + C +C GH++ DC N C NC +TGH +RDC
Sbjct: 115 G-GGGGYSGGGGGYGGGYGGGAGGKTCYSCGGVGHMSRDCVNGSKCYNCGETGHFSRDCS 173
Query: 168 N-----EPVCNLCNIAGHVARQCP 186
E +C C GHV +CP
Sbjct: 174 KRSTTGEKMCYKCQQPGHVQAECP 197
Score = 196 (74.1 bits), Expect = 2.3e-22, Sum P(2) = 2.3e-22
Identities = 50/163 (30%), Positives = 68/163 (41%)
Query: 33 CDPPLRRETRRSFSQGNL-CNNCKRPGHFARECP----NVAVCNNCGLPGHIASECTTQA 87
C P + R ++G C NC GH +R CP + +C C PGHI+ +C +
Sbjct: 19 CGQP-NHQARDCPNRGAAKCYNCGGEGHISRACPEEPKDQKICYRCSQPGHISRDCPSGG 77
Query: 88 RCWNCREPGHMASNCHNEGICHSCGKTGHRARDCSTHVQSGGD---LRLCNNCYKPGHIA 144
G +S C+ CG+ GH AR+CS GG Y G+
Sbjct: 78 AGGGGGGGGGQSSGAE----CYKCGEVGHIARNCSKGGYGGGGGGGYSGGGGGYGGGYGG 133
Query: 145 ADCTNDKACKNCRKTGHIARDCQNEPVCNLCNIAGHVARQCPK 187
K C +C GH++RDC N C C GH +R C K
Sbjct: 134 G--AGGKTCYSCGGVGHMSRDCVNGSKCYNCGETGHFSRDCSK 174
Score = 171 (65.3 bits), Expect = 6.0e-22, Sum P(2) = 6.0e-22
Identities = 35/102 (34%), Positives = 50/102 (49%)
Query: 89 CWNCREPGHMASNCHNEGI--CHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAAD 146
C+ C +P H A +C N G C++CG GH +R C + D ++C C +PGHI+ D
Sbjct: 16 CYTCGQPNHQARDCPNRGAAKCYNCGGEGHISRACPEEPK---DQKICYRCSQPGHISRD 72
Query: 147 CTNDKACKNCRKTGHIARDCQNEPVCNLCNIAGHVARQCPKG 188
C + A G + + C C GH+AR C KG
Sbjct: 73 CPSGGAGGGGGGGGGQSSGAE----CYKCGEVGHIARNCSKG 110
Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 38/113 (33%), Positives = 53/113 (46%)
Query: 46 SQGNLCNNCKRPGHFARECPNVAVCNN-----CGLPGHIASECTTQA---RCWNCREPGH 97
S G C C GH AR C G G A C++C GH
Sbjct: 89 SSGAECYKCGEVGHIARNCSKGGYGGGGGGGYSGGGGGYGGGYGGGAGGKTCYSCGGVGH 148
Query: 98 MASNCHNEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTND 150
M+ +C N C++CG+TGH +RDCS +G ++C C +PGH+ A+C N+
Sbjct: 149 MSRDCVNGSKCYNCGETGHFSRDCSKRSTTGE--KMCYKCQQPGHVQAECPNN 199
Score = 166 (63.5 bits), Expect = 6.4e-23, Sum P(3) = 6.4e-23
Identities = 37/107 (34%), Positives = 54/107 (50%)
Query: 48 GNLCNNCKRPGHFARECPN--VAVCNNCGLPGHIASECTTQAR----CWNCREPGHMASN 101
G C C +P H AR+CPN A C NCG GHI+ C + + C+ C +PGH++ +
Sbjct: 13 GRTCYTCGQPNHQARDCPNRGAAKCYNCGGEGHISRACPEEPKDQKICYRCSQPGHISRD 72
Query: 102 CHNEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCT 148
C + G G G ++ SG + C C + GHIA +C+
Sbjct: 73 CPSGGAGGGGGGGGGQS--------SGAE---CYKCGEVGHIARNCS 108
Score = 152 (58.6 bits), Expect = 8.9e-18, Sum P(2) = 8.9e-18
Identities = 32/70 (45%), Positives = 38/70 (54%)
Query: 126 QSGG-DLRLCNNCYKPGHIAADCTNDKA--CKNCRKTGHIARDCQNEP----VCNLCNIA 178
QSGG R C C +P H A DC N A C NC GHI+R C EP +C C+
Sbjct: 7 QSGGAGGRTCYTCGQPNHQARDCPNRGAAKCYNCGGEGHISRACPEEPKDQKICYRCSQP 66
Query: 179 GHVARQCPKG 188
GH++R CP G
Sbjct: 67 GHISRDCPSG 76
Score = 136 (52.9 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 36/114 (31%), Positives = 50/114 (43%)
Query: 68 AVCNNCGLPGHIASECTTQARC------WNCREPGHMASNCHNEG--ICHSCGKTGHRAR 119
A C CG GHIA C+ ++ G+ G C+SCG GH +R
Sbjct: 92 AECYKCGEVGHIARNCSKGGYGGGGGGGYSGGGGGYGGGYGGGAGGKTCYSCGGVGHMSR 151
Query: 120 DCSTHVQSGGDLRLCNNCYKPGHIAADC-----TNDKACKNCRKTGHIARDCQN 168
DC +G C NC + GH + DC T +K C C++ GH+ +C N
Sbjct: 152 DCV----NGSK---CYNCGETGHFSRDCSKRSTTGEKMCYKCQQPGHVQAECPN 198
Score = 99 (39.9 bits), Expect = 6.0e-22, Sum P(2) = 6.0e-22
Identities = 18/34 (52%), Positives = 21/34 (61%)
Query: 225 CRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYEC 258
C SC +GHMSRDCV C NCG GH + +C
Sbjct: 140 CYSCGGVGHMSRDCVNGSK-CYNCGETGHFSRDC 172
Score = 78 (32.5 bits), Expect = 6.4e-23, Sum P(3) = 6.4e-23
Identities = 16/41 (39%), Positives = 21/41 (51%)
Query: 225 CRSCNQMGHMSRDC-----VGPLIICRNCGGRGHMAYECPS 260
C +C + GH SRDC G + C C GH+ ECP+
Sbjct: 159 CYNCGETGHFSRDCSKRSTTGEKM-CYKCQQPGHVQAECPN 198
Score = 60 (26.2 bits), Expect = 7.0e-18, Sum P(2) = 7.0e-18
Identities = 9/17 (52%), Positives = 13/17 (76%)
Query: 245 CRNCGGRGHMAYECPSG 261
C +CGG GHM+ +C +G
Sbjct: 140 CYSCGGVGHMSRDCVNG 156
Score = 45 (20.9 bits), Expect = 6.4e-19, Sum P(2) = 6.4e-19
Identities = 6/15 (40%), Positives = 9/15 (60%)
Query: 224 ICRSCNQMGHMSRDC 238
+C C Q GH+ +C
Sbjct: 182 MCYKCQQPGHVQAEC 196
Score = 44 (20.5 bits), Expect = 6.4e-23, Sum P(3) = 6.4e-23
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 172 CNLCNIAGHVARQCPKG 188
C C GH++R C G
Sbjct: 140 CYSCGGVGHMSRDCVNG 156
>ZFIN|ZDB-GENE-030131-5045 [details] [associations]
symbol:cnbpa "CCHC-type zinc finger, nucleic acid
binding protein a" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0060322 "head development" evidence=IMP]
[GO:0014029 "neural crest formation" evidence=IMP] [GO:0014036
"neural crest cell fate specification" evidence=IMP] [GO:0051216
"cartilage development" evidence=IMP] [GO:0003697 "single-stranded
DNA binding" evidence=IDA] [GO:0003723 "RNA binding" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
ZFIN:ZDB-GENE-030131-5045 GO:GO:0046872 GO:GO:0008270 GO:GO:0003723
GO:GO:0003697 GO:GO:0051216 Gene3D:4.10.60.10 SUPFAM:SSF57756
HOGENOM:HOG000186262 HOVERGEN:HBG000397 GO:GO:0060322 GO:GO:0014036
InterPro:IPR025836 Pfam:PF14392 EMBL:AY228240 IPI:IPI00481422
UniGene:Dr.31379 STRING:Q801Z9 InParanoid:Q801Z9
ArrayExpress:Q801Z9 Uniprot:Q801Z9
Length = 163
Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 55/156 (35%), Positives = 70/156 (44%)
Query: 51 CNNCKRPGHFARECPNVA-------------VCNNCGLPGHIASECT-TQARCWNCREPG 96
C C R GH+ + CPN C CG GHIA +C T+ C+NC G
Sbjct: 8 CFGCGRSGHWIKNCPNAGRGRGRGRGRGKDLFCYRCGEQGHIARDCEQTEDACYNCHRSG 67
Query: 97 HMASNC-----HNEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDK 151
H++ +C E C++CGK GH ARDC H + C +C GH C K
Sbjct: 68 HISRDCKEPKKEREQCCYNCGKAGHVARDCD-HANE----QKCYSCGGFGHFQKLCDKVK 122
Query: 152 ACKNCRKTGHIARDCQN--EPVCNLCNIAGHVARQC 185
C C + GH+A C E C C GH+AR C
Sbjct: 123 -CYRCGEIGHVAVQCSKATEVNCYNCGKTGHLARDC 157
Score = 231 (86.4 bits), Expect = 2.5e-19, P = 2.5e-19
Identities = 50/129 (38%), Positives = 65/129 (50%)
Query: 51 CNNCKRPGHFARECPNVA-VCNNCGLPGHIASECTTQAR-----CWNCREPGHMASNC-H 103
C C GH AR+C C NC GHI+ +C + C+NC + GH+A +C H
Sbjct: 40 CYRCGEQGHIARDCEQTEDACYNCHRSGHISRDCKEPKKEREQCCYNCGKAGHVARDCDH 99
Query: 104 -NEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTN--DKACKNCRKTG 160
NE C+SCG GH + C D C C + GH+A C+ + C NC KTG
Sbjct: 100 ANEQKCYSCGGFGHFQKLC--------DKVKCYRCGEIGHVAVQCSKATEVNCYNCGKTG 151
Query: 161 HIARDCQNE 169
H+ARDC E
Sbjct: 152 HLARDCSIE 160
Score = 197 (74.4 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 44/121 (36%), Positives = 54/121 (44%)
Query: 87 ARCWNCREPGHMASNCHNEG-------------ICHSCGKTGHRARDCSTHVQSGGDLRL 133
+ C+ C GH NC N G C+ CG+ GH ARDC +
Sbjct: 6 SECFGCGRSGHWIKNCPNAGRGRGRGRGRGKDLFCYRCGEQGHIARDCEQTEDA------ 59
Query: 134 CNNCYKPGHIAADCTNDK-----ACKNCRKTGHIARDCQ--NEPVCNLCNIAGHVARQCP 186
C NC++ GHI+ DC K C NC K GH+ARDC NE C C GH + C
Sbjct: 60 CYNCHRSGHISRDCKEPKKEREQCCYNCGKAGHVARDCDHANEQKCYSCGGFGHFQKLCD 119
Query: 187 K 187
K
Sbjct: 120 K 120
Score = 80 (33.2 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 223 VICRSCNQMGHMSRDCVGPLII-CRNCGGRGHMAYEC 258
V C C ++GH++ C + C NCG GH+A +C
Sbjct: 121 VKCYRCGEIGHVAVQCSKATEVNCYNCGKTGHLARDC 157
Score = 57 (25.1 bits), Expect = 2.8e-20, Sum P(2) = 2.8e-20
Identities = 8/17 (47%), Positives = 13/17 (76%)
Query: 222 DVICRSCNQMGHMSRDC 238
+V C +C + GH++RDC
Sbjct: 141 EVNCYNCGKTGHLARDC 157
>UNIPROTKB|J9NRQ2 [details] [associations]
symbol:ZCCHC13 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10
SUPFAM:SSF57756 GeneTree:ENSGT00510000047065 EMBL:AAEX03026520
Ensembl:ENSCAFT00000049751 OMA:EEQKCYS Uniprot:J9NRQ2
Length = 146
Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 54/144 (37%), Positives = 74/144 (51%)
Query: 51 CNNCKRPGHFARECPNVAVCNNCGLPGH-IASECTTQAR---CWNCREPGHMASNCHN-E 105
C C R GH+AR CP V G G S C++ C+ C + GH A NC E
Sbjct: 6 CFRCGRSGHWARGCPRVGGSRGRGARGRGRGSPCSSTNLPDICYRCGKSGHHAKNCDLLE 65
Query: 106 GICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTN--DKACKNCRKTGHIA 163
IC++CG++GH A+DC + + C C +PGH+A DC ++ C +C + GHI
Sbjct: 66 DICYNCGRSGHIAKDCIEPKRERE--QCCYTCGRPGHLARDCDRQEEQKCYSCGEYGHIQ 123
Query: 164 RDCQNEPVCNLCNIAGHVARQCPK 187
+DC + C C GHVA C K
Sbjct: 124 KDC-TQVKCYRCGETGHVAINCSK 146
Score = 201 (75.8 bits), Expect = 3.7e-16, P = 3.7e-16
Identities = 40/108 (37%), Positives = 58/108 (53%)
Query: 49 NLCNNCKRPGHFARECPNVA-VCNNCGLPGHIASECTTQAR-----CWNCREPGHMASNC 102
++C C + GH A+ C + +C NCG GHIA +C R C+ C PGH+A +C
Sbjct: 46 DICYRCGKSGHHAKNCDLLEDICYNCGRSGHIAKDCIEPKREREQCCYTCGRPGHLARDC 105
Query: 103 --HNEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCT 148
E C+SCG+ GH +DC T V+ C C + GH+A +C+
Sbjct: 106 DRQEEQKCYSCGEYGHIQKDC-TQVK-------CYRCGETGHVAINCS 145
Score = 88 (36.0 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 15/39 (38%), Positives = 23/39 (58%)
Query: 224 ICRSCNQMGHMSRDCVGPLI----ICRNCGGRGHMAYEC 258
IC +C + GH+++DC+ P C CG GH+A +C
Sbjct: 67 ICYNCGRSGHIAKDCIEPKREREQCCYTCGRPGHLARDC 105
Score = 86 (35.3 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 225 CRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYEC 258
C SC + GH+ +DC + C CG GH+A C
Sbjct: 113 CYSCGEYGHIQKDCTQ--VKCYRCGETGHVAINC 144
Score = 85 (35.0 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 224 ICRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYEC 258
IC C + GH +++C IC NCG GH+A +C
Sbjct: 47 ICYRCGKSGHHAKNCDLLEDICYNCGRSGHIAKDC 81
Score = 49 (22.3 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 149 NDKACKNCRKTGHIARDC 166
+ K C C ++GH AR C
Sbjct: 2 SSKECFRCGRSGHWARGC 19
>UNIPROTKB|G4MRA3 [details] [associations]
symbol:MGG_13778 "Zinc finger protein GIS2" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10
SUPFAM:SSF57756 EMBL:CM001231 KO:K09250 RefSeq:XP_003710840.1
ProteinModelPortal:G4MRA3 EnsemblFungi:MGG_13778T0 GeneID:5048998
KEGG:mgr:MGG_13778 Uniprot:G4MRA3
Length = 230
Score = 176 (67.0 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 54/161 (33%), Positives = 68/161 (42%)
Query: 46 SQGNLCNNCKRPGHFARECP-----NVAVCNNC-GLPGHIASECTTQARCWNCREPGHMA 99
S LC NCK+PGH + CP C +C GL GH+ ++C T R G
Sbjct: 24 SAERLCYNCKQPGHESNGCPLPRTTEAKQCYHCQGL-GHVQADCPT------LRLSG-AG 75
Query: 100 SNCHNEGICHSCGKTGHRARDCSTH--VQSGGDLRLCNNCYKPGHIA----ADCTNDKAC 153
SN G C+SCG+ GH AR C G + Y G+ A C
Sbjct: 76 SN----GRCYSCGQPGHLARACPNPNGANMGRGAPVPRGGYGGGYGGRGGFAGGARPATC 131
Query: 154 KNCRKTGHIARDCQNEPV-CNLCNIAGHVARQC--PKGDSL 191
C H ARDCQ + + C C GH++R C P G L
Sbjct: 132 YKCGGPNHFARDCQAQAMKCYACGKLGHISRDCTAPNGGPL 172
Score = 167 (63.8 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 49/157 (31%), Positives = 66/157 (42%)
Query: 46 SQGNLCNNCKRPGHFARECPNVAVCNNCGLPGHIASECTTQARCWNCREPGHMASNCHN- 104
++ C +C+ GH +CP + + + G G RC++C +PGH+A C N
Sbjct: 48 TEAKQCYHCQGLGHVQADCPTLRL-SGAGSNG----------RCYSCGQPGHLARACPNP 96
Query: 105 EGICHSCGKTGHRARDCSTHVQSGG---DLR--LCNNCYKPGHIAADC-TNDKACKNCRK 158
G G R + GG R C C P H A DC C C K
Sbjct: 97 NGANMGRGAPVPRGGYGGGYGGRGGFAGGARPATCYKCGGPNHFARDCQAQAMKCYACGK 156
Query: 159 TGHIARDC---QNEPV------CNLCNIAGHVARQCP 186
GHI+RDC P+ C C AGH++RQCP
Sbjct: 157 LGHISRDCTAPNGGPLNTVGKTCYQCGEAGHISRQCP 193
Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 45/129 (34%), Positives = 59/129 (45%)
Query: 46 SQGNLCNNCKRPGHFARECPNVAVCN-NCGLP-------------GHIASECTTQARCWN 91
S G C +C +PGH AR CPN N G P G A A C+
Sbjct: 76 SNGR-CYSCGQPGHLARACPNPNGANMGRGAPVPRGGYGGGYGGRGGFAGGARP-ATCYK 133
Query: 92 CREPGHMASNCHNEGI-CHSCGKTGHRARDCSTHVQSGGDL----RLCNNCYKPGHIAAD 146
C P H A +C + + C++CGK GH +RDC+ +GG L + C C + GHI+
Sbjct: 134 CGGPNHFARDCQAQAMKCYACGKLGHISRDCTA--PNGGPLNTVGKTCYQCGEAGHISRQ 191
Query: 147 CTNDKACKN 155
C KA N
Sbjct: 192 CPT-KATAN 199
Score = 160 (61.4 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
Identities = 34/87 (39%), Positives = 45/87 (51%)
Query: 70 CNNCGLPGHIASECTTQAR-CWNCREPGHMASNCH----NEGI-CHSCGKTGHRARDCST 123
C CG GH A C++ R C+NC++PGH ++ C E C+ C GH DC T
Sbjct: 9 CYKCGNVGHYAEVCSSAERLCYNCKQPGHESNGCPLPRTTEAKQCYHCQGLGHVQADCPT 68
Query: 124 HVQSG-GDLRLCNNCYKPGHIAADCTN 149
SG G C +C +PGH+A C N
Sbjct: 69 LRLSGAGSNGRCYSCGQPGHLARACPN 95
Score = 149 (57.5 bits), Expect = 3.9e-17, Sum P(2) = 3.9e-17
Identities = 31/85 (36%), Positives = 47/85 (55%)
Query: 51 CNNCKRPGHFARECPNVA-VCNNCGLPGHIASEC----TTQAR-CWNCREPGHMASNCH- 103
C C GH+A C + +C NC PGH ++ C TT+A+ C++C+ GH+ ++C
Sbjct: 9 CYKCGNVGHYAEVCSSAERLCYNCKQPGHESNGCPLPRTTEAKQCYHCQGLGHVQADCPT 68
Query: 104 -------NEGICHSCGKTGHRARDC 121
+ G C+SCG+ GH AR C
Sbjct: 69 LRLSGAGSNGRCYSCGQPGHLARAC 93
Score = 141 (54.7 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 33/92 (35%), Positives = 42/92 (45%)
Query: 108 CHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADC-----TNDKACKNCRKTGHI 162
C+ CG GH A CS+ RLC NC +PGH + C T K C +C+ GH+
Sbjct: 9 CYKCGNVGHYAEVCSSAE------RLCYNCKQPGHESNGCPLPRTTEAKQCYHCQGLGHV 62
Query: 163 ARDCQNEPV--------CNLCNIAGHVARQCP 186
DC + C C GH+AR CP
Sbjct: 63 QADCPTLRLSGAGSNGRCYSCGQPGHLARACP 94
Score = 138 (53.6 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 30/85 (35%), Positives = 42/85 (49%)
Query: 68 AVCNNCGLPGHIASECTTQA-RCWNCREPGHMASNCH--NEG-------ICHSCGKTGHR 117
A C CG P H A +C QA +C+ C + GH++ +C N G C+ CG+ GH
Sbjct: 129 ATCYKCGGPNHFARDCQAQAMKCYACGKLGHISRDCTAPNGGPLNTVGKTCYQCGEAGHI 188
Query: 118 ARDCSTHVQSGGDLRLCNNCYKPGH 142
+R C T + GD +N P H
Sbjct: 189 SRQCPTKATANGD----SNAAAPAH 209
Score = 95 (38.5 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 225 CRSCNQMGHMSRDCV----GPLII----CRNCGGRGHMAYECPSGRIAD 265
C +C ++GH+SRDC GPL C CG GH++ +CP+ A+
Sbjct: 151 CYACGKLGHISRDCTAPNGGPLNTVGKTCYQCGEAGHISRQCPTKATAN 199
Score = 95 (38.5 bits), Expect = 6.8e-09, Sum P(2) = 6.8e-09
Identities = 20/61 (32%), Positives = 27/61 (44%)
Query: 132 RLCNNCYKPGHIAADCTN-DKACKNCRKTGHIARDCQ-----NEPVCNLCNIAGHVARQC 185
R C C GH A C++ ++ C NC++ GH + C C C GHV C
Sbjct: 7 RACYKCGNVGHYAEVCSSAERLCYNCKQPGHESNGCPLPRTTEAKQCYHCQGLGHVQADC 66
Query: 186 P 186
P
Sbjct: 67 P 67
Score = 81 (33.6 bits), Expect = 6.4e-19, Sum P(2) = 6.4e-19
Identities = 15/45 (33%), Positives = 21/45 (46%)
Query: 219 GYHDVICRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYEC--PSG 261
G C C H +RDC + C CG GH++ +C P+G
Sbjct: 125 GARPATCYKCGGPNHFARDCQAQAMKCYACGKLGHISRDCTAPNG 169
>UNIPROTKB|Q8WW36 [details] [associations]
symbol:ZCCHC13 "Zinc finger CCHC domain-containing protein
13" species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 eggNOG:COG5082
Gene3D:4.10.60.10 SUPFAM:SSF57756 HOGENOM:HOG000186262
HOVERGEN:HBG000397 EMBL:BC021176 IPI:IPI00397484 RefSeq:NP_976048.1
UniGene:Hs.157231 ProteinModelPortal:Q8WW36 SMR:Q8WW36
IntAct:Q8WW36 MINT:MINT-2879587 PhosphoSite:Q8WW36 DMDM:71152962
PRIDE:Q8WW36 DNASU:389874 Ensembl:ENST00000339534 GeneID:389874
KEGG:hsa:389874 UCSC:uc004ebs.4 CTD:389874 GeneCards:GC0XP073524
HGNC:HGNC:31749 HPA:HPA003382 neXtProt:NX_Q8WW36
PharmGKB:PA134926925 InParanoid:Q8WW36 OMA:SSKECFK PhylomeDB:Q8WW36
GenomeRNAi:389874 NextBio:103180 Bgee:Q8WW36 CleanEx:HS_ZCCHC13
Genevestigator:Q8WW36 GermOnline:ENSG00000187969 Uniprot:Q8WW36
Length = 166
Score = 231 (86.4 bits), Expect = 2.5e-19, P = 2.5e-19
Identities = 54/141 (38%), Positives = 69/141 (48%)
Query: 54 CKRPGHFARECPNVAVCNNCGLPGH-IASEC---TTQARCWNCREPGHMASNCHNEG-IC 108
C GH+AR CP G GH S+C T C+ C E G A NC G IC
Sbjct: 9 CGHSGHWARGCPRGGAGGRRG-GGHGRGSQCGSTTLSYTCYCCGESGRNAKNCVLLGNIC 67
Query: 109 HSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKA--CKNCRKTGHIARDC 166
++CG++GH A+DC + + C C + GH+A DC K C +C K GHI +DC
Sbjct: 68 YNCGRSGHIAKDCKDPKRERR--QHCYTCGRLGHLARDCDRQKEQKCYSCGKLGHIQKDC 125
Query: 167 QNEPVCNLCNIAGHVARQCPK 187
+ C C GHVA C K
Sbjct: 126 A-QVKCYRCGEIGHVAINCSK 145
Score = 170 (64.9 bits), Expect = 7.1e-13, P = 7.1e-13
Identities = 34/98 (34%), Positives = 50/98 (51%)
Query: 32 YCDPPLRRETRRSFSQGNLCNNCKRPGHFARECPNVAV-----CNNCGLPGHIASECTTQ 86
YC R + GN+C NC R GH A++C + C CG GH+A +C Q
Sbjct: 48 YCCGESGRNAKNCVLLGNICYNCGRSGHIAKDCKDPKRERRQHCYTCGRLGHLARDCDRQ 107
Query: 87 A--RCWNCREPGHMASNCHNEGICHSCGKTGHRARDCS 122
+C++C + GH+ +C C+ CG+ GH A +CS
Sbjct: 108 KEQKCYSCGKLGHIQKDCAQVK-CYRCGEIGHVAINCS 144
Score = 90 (36.7 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 15/38 (39%), Positives = 21/38 (55%)
Query: 225 CRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYECPSGR 262
C SC ++GH+ +DC + C CG GH+A C R
Sbjct: 112 CYSCGKLGHIQKDCAQ--VKCYRCGEIGHVAINCSKAR 147
Score = 85 (35.0 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 24/75 (32%), Positives = 33/75 (44%)
Query: 110 SCGKTGHRARDCSTHVQSG------------GDLRLCNNCY---KPGHIAADCTN-DKAC 153
+CG +GH AR C G G L CY + G A +C C
Sbjct: 8 ACGHSGHWARGCPRGGAGGRRGGGHGRGSQCGSTTLSYTCYCCGESGRNAKNCVLLGNIC 67
Query: 154 KNCRKTGHIARDCQN 168
NC ++GHIA+DC++
Sbjct: 68 YNCGRSGHIAKDCKD 82
Score = 49 (22.3 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 8/14 (57%), Positives = 10/14 (71%)
Query: 175 CNIAGHVARQCPKG 188
C +GH AR CP+G
Sbjct: 9 CGHSGHWARGCPRG 22
>TAIR|locus:2135139 [details] [associations]
symbol:CSDP1 "cold shock domain protein 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA;ISS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009409 "response
to cold" evidence=IGI;IEP] [GO:0003690 "double-stranded DNA
binding" evidence=IDA] [GO:0003697 "single-stranded DNA binding"
evidence=IDA] [GO:0003723 "RNA binding" evidence=IDA] [GO:0009414
"response to water deprivation" evidence=IEP] [GO:0009651 "response
to salt stress" evidence=IEP] [GO:0010501 "RNA secondary structure
unwinding" evidence=IDA] [GO:0032508 "DNA duplex unwinding"
evidence=IDA] [GO:0009631 "cold acclimation" evidence=IGI]
[GO:0009165 "nucleotide biosynthetic process" evidence=RCA]
InterPro:IPR001878 InterPro:IPR002059 InterPro:IPR011129
Pfam:PF00098 Pfam:PF00313 PRINTS:PR00050 PROSITE:PS50158
SMART:SM00343 SMART:SM00357 Prosite:PS00352 GO:GO:0005634
GO:GO:0005737 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006355
GO:GO:0046872 GO:GO:0009651 GO:GO:0009414 GO:GO:0008270
GO:GO:0009631 GO:GO:0003723 EMBL:AL161588 GO:GO:0003690
GO:GO:0003697 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
Gene3D:4.10.60.10 SUPFAM:SSF57756 EMBL:AL022373
HOGENOM:HOG000186262 KO:K09250 InterPro:IPR019844 GO:GO:0010501
EMBL:AK226815 IPI:IPI00525206 PIR:T05494 RefSeq:NP_195326.1
UniGene:At.23073 HSSP:P15277 ProteinModelPortal:O65639 SMR:O65639
STRING:O65639 PaxDb:O65639 PRIDE:O65639 EnsemblPlants:AT4G36020.1
GeneID:829758 KEGG:ath:AT4G36020 TAIR:At4g36020 eggNOG:COG1278
InParanoid:O65639 OMA:GRACYNC PhylomeDB:O65639
ProtClustDB:CLSN2685328 Genevestigator:O65639 GO:GO:0032508
Uniprot:O65639
Length = 299
Score = 198 (74.8 bits), Expect = 7.7e-16, P = 7.7e-16
Identities = 51/141 (36%), Positives = 60/141 (42%)
Query: 51 CNNCKRPGHFARECPNVAV---------------CNNCGLPGHIASECTTQARCWNCREP 95
C C GH AR+C +V C CG GH A +CT + N R
Sbjct: 166 CYTCGDVGHVARDCTQKSVGNGDQRGAVKGGNDGCYTCGDVGHFARDCTQKVAAGNVRSG 225
Query: 96 GHMASNCHNEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCT------- 148
G G C+SCG GH ARDC+T Q R C C GH+A DC
Sbjct: 226 GG------GSGTCYSCGGVGHIARDCATKRQPS---RGCYQCGGSGHLARDCDQRGSGGG 276
Query: 149 -NDKACKNCRKTGHIARDCQN 168
ND AC C K GH AR+C +
Sbjct: 277 GNDNACYKCGKEGHFARECSS 297
Score = 186 (70.5 bits), Expect = 2.5e-18, Sum P(2) = 2.5e-18
Identities = 55/166 (33%), Positives = 75/166 (45%)
Query: 42 RRSFSQGNLCNNCKRPGHFARECPNVAV-------------CNNCGLPGHIASECTTQAR 88
RRS G C NC GHFAR+C + C CG GH+A +CT Q
Sbjct: 126 RRSRG-GEGCYNCGDTGHFARDCTSAGNGDQRGATKGGNDGCYTCGDVGHVARDCT-QKS 183
Query: 89 CWNCREPGHMASNCHNEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCT 148
N + G + N+G C++CG GH ARDC+ V +G ++ +
Sbjct: 184 VGNGDQRGAVKGG--NDG-CYTCGDVGHFARDCTQKVAAG-------------NVRSGGG 227
Query: 149 NDKACKNCRKTGHIARDC--QNEPV--CNLCNIAGHVARQCPKGDS 190
C +C GHIARDC + +P C C +GH+AR C + S
Sbjct: 228 GSGTCYSCGGVGHIARDCATKRQPSRGCYQCGGSGHLARDCDQRGS 273
Score = 150 (57.9 bits), Expect = 3.2e-16, Sum P(2) = 3.2e-16
Identities = 49/142 (34%), Positives = 63/142 (44%)
Query: 52 NNCKRPGHFARECPNVAVCNNCGLPGHIASECTTQARCWNCREPGHMASNCHNEGICHSC 111
NN + G+ AR + C NCG GHI+ +C G S EG C++C
Sbjct: 86 NNSR--GNGARRGGGGSGCYNCGELGHISKDCGIGGGGGG----GERRSR-GGEG-CYNC 137
Query: 112 GKTGHRARDCSTHVQSGGDLRL--------CNNCYKPGHIAADCTNDKACKNCRKTGHIA 163
G TGH ARDC++ GD R C C GH+A DCT K+ N + G +
Sbjct: 138 GDTGHFARDCTS--AGNGDQRGATKGGNDGCYTCGDVGHVARDCTQ-KSVGNGDQRGAVK 194
Query: 164 RDCQNEPVCNLCNIAGHVARQC 185
N+ C C GH AR C
Sbjct: 195 GG--NDG-CYTCGDVGHFARDC 213
Score = 144 (55.7 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 52/178 (29%), Positives = 69/178 (38%)
Query: 108 CHSCGKTGHRARDCSTHVQSGGDLRL------CNNCYKPGHIAADCTNDKACKNCRKTGH 161
C++CG+ GH ++DC GG R C NC GH A DCT+ N + G
Sbjct: 102 CYNCGELGHISKDCGIGGGGGGGERRSRGGEGCYNCGDTGHFARDCTS---AGNGDQRG- 157
Query: 162 IARDCQNEPVCNLCNIAGHVARQCPKGDSLXXXXXXXXXXXXXXXXXXXXXXXXXYVGYH 221
A N+ C C GHVAR C + G +
Sbjct: 158 -ATKGGNDG-CYTCGDVGHVARDCTQ------------------KSVGNGDQRGAVKGGN 197
Query: 222 DVICRSCNQMGHMSRDCV------------GPLIICRNCGGRGHMAYECPSGRIADRG 267
D C +C +GH +RDC G C +CGG GH+A +C + R RG
Sbjct: 198 DG-CYTCGDVGHFARDCTQKVAAGNVRSGGGGSGTCYSCGGVGHIARDCATKRQPSRG 254
Score = 94 (38.1 bits), Expect = 3.2e-16, Sum P(2) = 3.2e-16
Identities = 17/37 (45%), Positives = 22/37 (59%)
Query: 225 CRSCNQMGHMSRDCVG---PLIICRNCGGRGHMAYEC 258
C SC +GH++RDC P C CGG GH+A +C
Sbjct: 232 CYSCGGVGHIARDCATKRQPSRGCYQCGGSGHLARDC 268
Score = 75 (31.5 bits), Expect = 3.0e-14, Sum P(2) = 3.0e-14
Identities = 17/43 (39%), Positives = 19/43 (44%)
Query: 225 CRSCNQMGHMSRDCV-------GPLIICRNCGGRGHMAYECPS 260
C C GH++RDC G C CG GH A EC S
Sbjct: 255 CYQCGGSGHLARDCDQRGSGGGGNDNACYKCGKEGHFARECSS 297
Score = 52 (23.4 bits), Expect = 2.5e-18, Sum P(2) = 2.5e-18
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 219 GYHDVICRSCNQMGHMSRDC 238
G +D C C + GH +R+C
Sbjct: 276 GGNDNACYKCGKEGHFAREC 295
>UNIPROTKB|F1NI84 [details] [associations]
symbol:CNBP "Cellular nucleic acid-binding protein"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 GO:GO:0005783
GO:GO:0005829 GO:GO:0005634 GO:GO:0046872 GO:GO:0008284
GO:GO:0008270 GO:GO:0045944 GO:GO:0003676 Gene3D:4.10.60.10
SUPFAM:SSF57756 GeneTree:ENSGT00510000047065 EMBL:AADN02013931
IPI:IPI00819060 Ensembl:ENSGALT00000008010 ArrayExpress:F1NI84
Uniprot:F1NI84
Length = 105
Score = 221 (82.9 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 44/104 (42%), Positives = 58/104 (55%)
Query: 69 VCNNCGLPGHIASECTTQA-RCWNCREPGHMASNC-----HNEGICHSCGKTGHRARDCS 122
+C CG GH+A +C Q C+NC GH+A +C E C++CGK GH ARDC
Sbjct: 8 ICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCD 67
Query: 123 THVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCRKTGHIARDC 166
H D + C +C + GHI DCT K C C +TGH+A +C
Sbjct: 68 -HA----DEQKCYSCGEFGHIQKDCTKVK-CYRCGETGHVAINC 105
Score = 217 (81.4 bits), Expect = 7.5e-18, P = 7.5e-18
Identities = 40/100 (40%), Positives = 57/100 (57%)
Query: 89 CWNCREPGHMASNCH-NEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADC 147
C+ C E GH+A +C E C++CG+ GH A+DC + + C NC KPGH+A DC
Sbjct: 9 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKRERE--QCCYNCGKPGHLARDC 66
Query: 148 --TNDKACKNCRKTGHIARDCQNEPVCNLCNIAGHVARQC 185
+++ C +C + GHI +DC + C C GHVA C
Sbjct: 67 DHADEQKCYSCGEFGHIQKDC-TKVKCYRCGETGHVAINC 105
Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 44/112 (39%), Positives = 61/112 (54%)
Query: 44 SFSQGNLCNNCKRPGHFARECP-NVAVCNNCGLPGHIASECTTQAR-----CWNCREPGH 97
S S ++C C GH A++C C NCG GHIA +C R C+NC +PGH
Sbjct: 2 SSSLPDICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGH 61
Query: 98 MASNC-H-NEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADC 147
+A +C H +E C+SCG+ GH +DC T V+ C C + GH+A +C
Sbjct: 62 LARDCDHADEQKCYSCGEFGHIQKDC-TKVK-------CYRCGETGHVAINC 105
Score = 180 (68.4 bits), Expect = 9.8e-17, Sum P(2) = 9.8e-17
Identities = 36/88 (40%), Positives = 46/88 (52%)
Query: 107 ICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDK-----ACKNCRKTGH 161
IC+ CG++GH A+DC + C NC + GHIA DC K C NC K GH
Sbjct: 8 ICYRCGESGHLAKDCDLQEDA------CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGH 61
Query: 162 IARDCQN--EPVCNLCNIAGHVARQCPK 187
+ARDC + E C C GH+ + C K
Sbjct: 62 LARDCDHADEQKCYSCGEFGHIQKDCTK 89
Score = 149 (57.5 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 28/66 (42%), Positives = 39/66 (59%)
Query: 39 RETRRSFSQGNLCNNCKRPGHFARECPNV--AVCNNCGLPGHIASECTTQARCWNCREPG 96
+E +R Q C NC +PGH AR+C + C +CG GHI +CT + +C+ C E G
Sbjct: 43 KEPKREREQ--CCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCT-KVKCYRCGETG 99
Query: 97 HMASNC 102
H+A NC
Sbjct: 100 HVAINC 105
Score = 137 (53.3 bits), Expect = 3.7e-17, Sum P(2) = 3.7e-17
Identities = 26/63 (41%), Positives = 34/63 (53%)
Query: 133 LCNNCYKPGHIAADCT-NDKACKNCRKTGHIARDC-----QNEPVCNLCNIAGHVARQCP 186
+C C + GH+A DC + AC NC + GHIA+DC + E C C GH+AR C
Sbjct: 8 ICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCD 67
Query: 187 KGD 189
D
Sbjct: 68 HAD 70
Score = 91 (37.1 bits), Expect = 0.00046, P = 0.00046
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 224 ICRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYEC 258
IC C + GH+++DC C NCG GH+A +C
Sbjct: 8 ICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDC 42
Score = 87 (35.7 bits), Expect = 3.7e-17, Sum P(2) = 3.7e-17
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 225 CRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYEC 258
C SC + GH+ +DC + C CG GH+A C
Sbjct: 74 CYSCGEFGHIQKDCTK--VKCYRCGETGHVAINC 105
Score = 40 (19.1 bits), Expect = 9.8e-17, Sum P(2) = 9.8e-17
Identities = 6/16 (37%), Positives = 10/16 (62%)
Query: 223 VICRSCNQMGHMSRDC 238
V C C + GH++ +C
Sbjct: 90 VKCYRCGETGHVAINC 105
>DICTYBASE|DDB_G0293328 [details] [associations]
symbol:DDB_G0293328 "Cellular nucleic acid-binding
protein" species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 dictyBase:DDB_G0293328
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 eggNOG:COG5082
Gene3D:4.10.60.10 SUPFAM:SSF57756 EMBL:AAFI02000201
RefSeq:XP_629203.1 ProteinModelPortal:Q54BY8 STRING:Q54BY8
EnsemblProtists:DDB0191881 GeneID:8629162 KEGG:ddi:DDB_G0293328
InParanoid:Q54BY8 OMA:CKEVGHI ProtClustDB:PTZ00368 Uniprot:Q54BY8
Length = 131
Score = 149 (57.5 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 43/135 (31%), Positives = 60/135 (44%)
Query: 51 CNNCKRPGHFARECPNVA-----VCNNCGLPGHIASECTTQAR-CWNCREPGHMASNCHN 104
C CK GH +R CP C C + GH++ EC + + ++P
Sbjct: 9 CYKCKEVGHISRNCPKNPEAGDRACYVCNVVGHLSRECPQNPQPTFEKKDPIK------- 61
Query: 105 EGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTN--------DKA-CKN 155
C+ C GH ARDC + G D + C NC GHI+ DC + D A C
Sbjct: 62 ---CYQCNGFGHFARDC----RRGRDNK-CYNCGGLGHISKDCPSPSTRGQGRDAAKCYK 113
Query: 156 CRKTGHIARDC-QNE 169
C + GHIA+ C +N+
Sbjct: 114 CNQPGHIAKACPENQ 128
Score = 149 (57.5 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 41/135 (30%), Positives = 54/135 (40%)
Query: 70 CNNCGLPGHIASECTTQARCWNCREPGHMASNCHNEGICHSCGKTGHRARDCSTHVQSGG 129
C C GHI+ C E G A C+ C GH +R+C + Q
Sbjct: 9 CYKCKEVGHISRNCPKNP------EAGDRA--------CYVCNVVGHLSRECPQNPQPTF 54
Query: 130 DLR---LCNNCYKPGHIAADCTN--DKACKNCRKTGHIARDCQNEPV---------CNLC 175
+ + C C GH A DC D C NC GHI++DC + C C
Sbjct: 55 EKKDPIKCYQCNGFGHFARDCRRGRDNKCYNCGGLGHISKDCPSPSTRGQGRDAAKCYKC 114
Query: 176 NIAGHVARQCPKGDS 190
N GH+A+ CP+ S
Sbjct: 115 NQPGHIAKACPENQS 129
Score = 135 (52.6 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 30/94 (31%), Positives = 46/94 (48%)
Query: 105 EGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADC------TNDKA----CK 154
E C+ C + GH +R+C + ++G R C C GH++ +C T +K C
Sbjct: 6 EKSCYKCKEVGHISRNCPKNPEAGD--RACYVCNVVGHLSRECPQNPQPTFEKKDPIKCY 63
Query: 155 NCRKTGHIARDCQN--EPVCNLCNIAGHVARQCP 186
C GH ARDC+ + C C GH+++ CP
Sbjct: 64 QCNGFGHFARDCRRGRDNKCYNCGGLGHISKDCP 97
Score = 116 (45.9 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 17/43 (39%), Positives = 29/43 (67%)
Query: 150 DKACKNCRKTGHIARDCQNEP-----VCNLCNIAGHVARQCPK 187
+K+C C++ GHI+R+C P C +CN+ GH++R+CP+
Sbjct: 6 EKSCYKCKEVGHISRNCPKNPEAGDRACYVCNVVGHLSRECPQ 48
Score = 106 (42.4 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 20/44 (45%), Positives = 25/44 (56%)
Query: 225 CRSCNQMGHMSRDCV-GPLIICRNCGGRGHMAYECPSGRIADRG 267
C CN GH +RDC G C NCGG GH++ +CPS +G
Sbjct: 62 CYQCNGFGHFARDCRRGRDNKCYNCGGLGHISKDCPSPSTRGQG 105
Score = 75 (31.5 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 15/46 (32%), Positives = 21/46 (45%)
Query: 225 CRSCNQMGHMSRDCVGP--------LIICRNCGGRGHMAYECPSGR 262
C +C +GH+S+DC P C C GH+A CP +
Sbjct: 83 CYNCGGLGHISKDCPSPSTRGQGRDAAKCYKCNQPGHIAKACPENQ 128
>TAIR|locus:2827810 [details] [associations]
symbol:CSP3 "cold shock domain protein 3" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA;ISS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0009409 "response to cold"
evidence=IEP;IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0009631
"cold acclimation" evidence=IMP] [GO:0032508 "DNA duplex unwinding"
evidence=IDA] InterPro:IPR001878 InterPro:IPR002059
InterPro:IPR011129 Pfam:PF00098 Pfam:PF00313 PRINTS:PR00050
PROSITE:PS50158 SMART:SM00343 SMART:SM00357 Prosite:PS00352
GO:GO:0005634 GO:GO:0005737 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0009631 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 Gene3D:4.10.60.10 SUPFAM:SSF57756
HOGENOM:HOG000186262 KO:K09250 InterPro:IPR019844 eggNOG:COG1278
ProtClustDB:CLSN2685328 GO:GO:0032508 HSSP:O54310 EMBL:AB308041
EMBL:AY035133 EMBL:AY062985 IPI:IPI00519047 PIR:T00837
RefSeq:NP_565427.1 UniGene:At.19464 ProteinModelPortal:Q94C69
SMR:Q94C69 PaxDb:Q94C69 PRIDE:Q94C69 EnsemblPlants:AT2G17870.1
GeneID:816297 KEGG:ath:AT2G17870 TAIR:At2g17870 InParanoid:Q94C69
OMA:MEDQSAA PhylomeDB:Q94C69 Genevestigator:Q94C69 Uniprot:Q94C69
Length = 301
Score = 160 (61.4 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 44/141 (31%), Positives = 58/141 (41%)
Query: 48 GNLCNNCKRPGHFARECPNVAVCNNCGLPGHIASECTTQARCWNCREPGHMASNCHNEG- 106
G C +C GH A++C + N G G S C+ C GH A +C G
Sbjct: 160 GRPCYSCGEVGHLAKDCRGGSGGNRYGGGGGRGSGGDG---CYMCGGVGHFARDCRQNGG 216
Query: 107 --------ICHSCGKTGHRARDCSTHVQSGGDL--RLCNNCYKPGHIAADCTN------- 149
C++CG GH A+ C++ + SGG R C C GH+A DC
Sbjct: 217 GNVGGGGSTCYTCGGVGHIAKVCTSKIPSGGGGGGRACYECGGTGHLARDCDRRGSGSSG 276
Query: 150 ----DKACKNCRKTGHIARDC 166
C C K GH AR+C
Sbjct: 277 GGGGSNKCFICGKEGHFAREC 297
Score = 158 (60.7 bits), Expect = 3.1e-16, Sum P(2) = 3.1e-16
Identities = 51/170 (30%), Positives = 67/170 (39%)
Query: 37 LRRETRRSFSQGNLCNNCKRPGHFARECPNVAVCNNCGLPGHIASECTTQARCWNCREPG 96
L ++ S G C NC GH A++C + + G G S + C+ C + G
Sbjct: 82 LNKKENSSRGSGGNCFNCGEVGHMAKDCDGGSGGKSFGGGGGRRSG--GEGECYMCGDVG 139
Query: 97 HMASNCHNEG------------ICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIA 144
H A +C G C+SCG+ GH A+DC SGG N Y G
Sbjct: 140 HFARDCRQSGGGNSGGGGGGGRPCYSCGEVGHLAKDCRGG--SGG------NRYGGG--G 189
Query: 145 ADCTNDKACKNCRKTGHIARDC-QNE--------PVCNLCNIAGHVARQC 185
+ C C GH ARDC QN C C GH+A+ C
Sbjct: 190 GRGSGGDGCYMCGGVGHFARDCRQNGGGNVGGGGSTCYTCGGVGHIAKVC 239
Score = 148 (57.2 bits), Expect = 6.9e-09, P = 6.9e-09
Identities = 52/163 (31%), Positives = 64/163 (39%)
Query: 42 RRSFSQGNLCNNCKRPGHFARECPNVA------------VCNNCGLPGHIASECTTQARC 89
RRS +G C C GHFAR+C C +CG GH+A +C +
Sbjct: 124 RRSGGEGE-CYMCGDVGHFARDCRQSGGGNSGGGGGGGRPCYSCGEVGHLAKDC--RGGS 180
Query: 90 WNCREPGHMASNCHNEGICHSCGKTGHRARDCSTHVQS--GGDLRLCNNCYKPGHIAADC 147
R G +G C+ CG GH ARDC + GG C C GHIA C
Sbjct: 181 GGNRYGGGGGRGSGGDG-CYMCGGVGHFARDCRQNGGGNVGGGGSTCYTCGGVGHIAKVC 239
Query: 148 TNDKACKNCRKTGHIARDCQNEPVCNLCNIAGHVARQCPKGDS 190
T+ K G R C C GH+AR C + S
Sbjct: 240 TS----KIPSGGGGGGRACYE------CGGTGHLARDCDRRGS 272
Score = 147 (56.8 bits), Expect = 9.5e-09, P = 9.5e-09
Identities = 44/118 (37%), Positives = 53/118 (44%)
Query: 46 SQGNLCNNCKRPGHFARECP-----NV----AVCNNCGLPGHIASECTTQARCWNCREPG 96
S G+ C C GHFAR+C NV + C CG GHIA CT++
Sbjct: 193 SGGDGCYMCGGVGHFARDCRQNGGGNVGGGGSTCYTCGGVGHIAKVCTSK---------- 242
Query: 97 HMASNCHNEG-ICHSCGKTGHRARDC----STHVQSGGDLRLCNNCYKPGHIAADCTN 149
+ S G C+ CG TGH ARDC S GG C C K GH A +CT+
Sbjct: 243 -IPSGGGGGGRACYECGGTGHLARDCDRRGSGSSGGGGGSNKCFICGKEGHFARECTS 299
Score = 92 (37.4 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 29/93 (31%), Positives = 35/93 (37%)
Query: 106 GICHSCGKTGHRARDCS-----THVQSGGDLRL-----CNNCYKPGHIAADCTNDKACKN 155
G C +CG+ GH A+DC GG R C C GH A DC N
Sbjct: 94 GNCFNCGEVGHMAKDCDGGSGGKSFGGGGGRRSGGEGECYMCGDVGHFARDCRQSGG-GN 152
Query: 156 CRKTGHIARDCQNEPVCNLCNIAGHVARQCPKG 188
G R C + C GH+A+ C G
Sbjct: 153 SGGGGGGGRPCYS------CGEVGHLAKDCRGG 179
Score = 72 (30.4 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 17/44 (38%), Positives = 20/44 (45%)
Query: 225 CRSCNQMGHMSRDCV--------GPLIICRNCGGRGHMAYECPS 260
C C +GH +RDC G C CGG GH+A C S
Sbjct: 198 CYMCGGVGHFARDCRQNGGGNVGGGGSTCYTCGGVGHIAKVCTS 241
Score = 71 (30.1 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 15/49 (30%), Positives = 23/49 (46%)
Query: 218 VGYHDVICRSCNQMGHMSRDCVGPLI--------ICRNCGGRGHMAYEC 258
VG C +C +GH+++ C + C CGG GH+A +C
Sbjct: 219 VGGGGSTCYTCGGVGHIAKVCTSKIPSGGGGGGRACYECGGTGHLARDC 267
Score = 65 (27.9 bits), Expect = 3.1e-16, Sum P(2) = 3.1e-16
Identities = 17/46 (36%), Positives = 19/46 (41%)
Query: 225 CRSCNQMGHMSRDCV----------GPLIICRNCGGRGHMAYECPS 260
C C GH++RDC G C CG GH A EC S
Sbjct: 254 CYECGGTGHLARDCDRRGSGSSGGGGGSNKCFICGKEGHFARECTS 299
>FB|FBgn0034802 [details] [associations]
symbol:CG3800 species:7227 "Drosophila melanogaster"
[GO:0003676 "nucleic acid binding" evidence=ISS;NAS] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
EMBL:AE013599 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
eggNOG:COG5082 Gene3D:4.10.60.10 SUPFAM:SSF57756 KO:K09250
GeneTree:ENSGT00510000047065 OMA:QCYNCGE EMBL:AY075371
EMBL:AY118596 RefSeq:NP_001188992.1 RefSeq:NP_611739.1
UniGene:Dm.5513 ProteinModelPortal:Q8T8R1 SMR:Q8T8R1
MINT:MINT-943666 STRING:Q8T8R1 PaxDb:Q8T8R1 PRIDE:Q8T8R1
EnsemblMetazoa:FBtr0071994 EnsemblMetazoa:FBtr0303464 GeneID:37646
KEGG:dme:Dmel_CG3800 UCSC:CG3800-RA FlyBase:FBgn0034802
InParanoid:Q8T8R1 OrthoDB:EOG40RXZ0 PhylomeDB:Q8T8R1
GenomeRNAi:37646 NextBio:804714 Bgee:Q8T8R1 Uniprot:Q8T8R1
Length = 165
Score = 200 (75.5 bits), Expect = 4.7e-16, P = 4.7e-16
Identities = 37/105 (35%), Positives = 53/105 (50%)
Query: 70 CNNCGLPGHIASECTTQA-RCWNCREPGHMASNCH--NEGICHSCGKTGHRARDCSTHVQ 126
C C GH A C +A RC+ C GH++ +C + C+ C KTGH R+C V
Sbjct: 57 CYKCNQFGHFARACPEEAERCYRCNGIGHISKDCTQADNPTCYRCNKTGHWVRNCPEAVN 116
Query: 127 SGGDLRL-CNNCYKPGHIAADCTN-DKACKNCRKTGHIARDCQNE 169
G + C C + GHI+ +C K C C K+GH+ R+C +
Sbjct: 117 ERGPTNVSCYKCNRTGHISKNCPETSKTCYGCGKSGHLRRECDEK 161
Score = 191 (72.3 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 50/152 (32%), Positives = 64/152 (42%)
Query: 46 SQGNLCNNCKRPGHFARECPNVAVCNNCGLPGHIASECTTQARCWNCREPGHMASNCHNE 105
S C C RPGHFAR+C G PG + + G M N
Sbjct: 2 SMSATCYKCNRPGHFARDCS----LGGGGGPGGVGGGGGGGGGGMRGNDGGGMRRNREK- 56
Query: 106 GICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCT--NDKACKNCRKTGHIA 163
C+ C + GH AR C + C C GHI+ DCT ++ C C KTGH
Sbjct: 57 --CYKCNQFGHFARACPEEAER------CYRCNGIGHISKDCTQADNPTCYRCNKTGHWV 108
Query: 164 RDCQ---NE--PV---CNLCNIAGHVARQCPK 187
R+C NE P C CN GH+++ CP+
Sbjct: 109 RNCPEAVNERGPTNVSCYKCNRTGHISKNCPE 140
Score = 169 (64.5 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 36/112 (32%), Positives = 55/112 (49%)
Query: 88 RCWNCREPGHMASNCHNEGI-CHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAAD 146
+C+ C + GH A C E C+ C GH ++DC+ D C C K GH +
Sbjct: 56 KCYKCNQFGHFARACPEEAERCYRCNGIGHISKDCTQ-----ADNPTCYRCNKTGHWVRN 110
Query: 147 C---TNDK-----ACKNCRKTGHIARDC-QNEPVCNLCNIAGHVARQCP-KG 188
C N++ +C C +TGHI+++C + C C +GH+ R+C KG
Sbjct: 111 CPEAVNERGPTNVSCYKCNRTGHISKNCPETSKTCYGCGKSGHLRRECDEKG 162
Score = 136 (52.9 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 27/90 (30%), Positives = 37/90 (41%)
Query: 51 CNNCKRPGHFARECPNV--AVCNNCGLPGHIASECT--------TQARCWNCREPGHMAS 100
C C GH +++C C C GH C T C+ C GH++
Sbjct: 77 CYRCNGIGHISKDCTQADNPTCYRCNKTGHWVRNCPEAVNERGPTNVSCYKCNRTGHISK 136
Query: 101 NC-HNEGICHSCGKTGHRARDCSTHVQSGG 129
NC C+ CGK+GH R+C + GG
Sbjct: 137 NCPETSKTCYGCGKSGHLRRECD---EKGG 163
Score = 114 (45.2 bits), Expect = 8.3e-13, Sum P(2) = 8.3e-13
Identities = 29/89 (32%), Positives = 39/89 (43%)
Query: 108 CHSCGKTGHRARDCSTHVQSG-GDLRLCNNCYKPGHIAADC----TNDKACKNCRKTGHI 162
C+ C + GH ARDCS G G + G D N + C C + GH
Sbjct: 7 CYKCNRPGHFARDCSLGGGGGPGGVGGGGGGGGGGMRGNDGGGMRRNREKCYKCNQFGHF 66
Query: 163 ARDCQNEPV-CNLCNIAGHVARQCPKGDS 190
AR C E C CN GH+++ C + D+
Sbjct: 67 ARACPEEAERCYRCNGIGHISKDCTQADN 95
Score = 92 (37.4 bits), Expect = 8.3e-13, Sum P(2) = 8.3e-13
Identities = 16/40 (40%), Positives = 22/40 (55%)
Query: 219 GYHDVICRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYEC 258
G +V C CN+ GH+S++C C CG GH+ EC
Sbjct: 119 GPTNVSCYKCNRTGHISKNCPETSKTCYGCGKSGHLRREC 158
Score = 73 (30.8 bits), Expect = 7.6e-11, Sum P(2) = 7.6e-11
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 225 CRSCNQMGHMSRDCV------GPL-IICRNCGGRGHMAYECP 259
C CN+ GH R+C GP + C C GH++ CP
Sbjct: 98 CYRCNKTGHWVRNCPEAVNERGPTNVSCYKCNRTGHISKNCP 139
>ZFIN|ZDB-GENE-030102-2 [details] [associations]
symbol:zcchc7 "zinc finger, CCHC domain containing 7"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 ZFIN:ZDB-GENE-030102-2
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10
SUPFAM:SSF57756 GeneTree:ENSGT00510000048226 EMBL:BX511134
EMBL:BX284619 EMBL:CR786570 IPI:IPI00996291
Ensembl:ENSDART00000129066 ArrayExpress:F1QLY2 Bgee:F1QLY2
Uniprot:F1QLY2
Length = 627
Score = 198 (74.8 bits), Expect = 8.3e-15, P = 8.3e-15
Identities = 46/146 (31%), Positives = 62/146 (42%)
Query: 39 RETRRSFSQGNL-CNNCKRPGHFARECPN---VAVCNNCGLPGHIASECTTQARCWNCRE 94
R T R +++ ++ C NC + GH ++ CP V C+ CGL GH+ C + C NC
Sbjct: 263 RSTYRYYTEKSITCRNCNKTGHLSKNCPTLKKVPCCSLCGLRGHLLRTCPNR-HCSNCSL 321
Query: 95 PGHMASNCHNEGI----CHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAAD---C 147
PGH + +C CH CG TGH C Q L P +AD C
Sbjct: 322 PGHTSDDCLERAFWYKRCHRCGMTGHFIDACP---QIWRQYHLTTTA-GPIRKSADPKAC 377
Query: 148 TNDKACKNCRKTGHIARDCQNEPVCN 173
C NC + GH C + N
Sbjct: 378 QKRAYCYNCSRKGHFGHQCSQRRMYN 403
Score = 136 (52.9 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 27/84 (32%), Positives = 40/84 (47%)
Query: 108 CHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCRKTGHIARDCQ 167
C +C KTGH +++C T + + C+ C GH+ C N + C NC GH + DC
Sbjct: 276 CRNCNKTGHLSKNCPTLKK----VPCCSLCGLRGHLLRTCPN-RHCSNCSLPGHTSDDCL 330
Query: 168 NEPV----CNLCNIAGHVARQCPK 187
C+ C + GH CP+
Sbjct: 331 ERAFWYKRCHRCGMTGHFIDACPQ 354
Score = 135 (52.6 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 35/125 (28%), Positives = 48/125 (38%)
Query: 70 CNNCGLPGHIASECTTQAR---CWNCREPGHMASNCHNEGICHSCGKTGHRARDCSTHVQ 126
C NC GH++ C T + C C GH+ C N C +C GH + DC ++
Sbjct: 276 CRNCNKTGHLSKNCPTLKKVPCCSLCGLRGHLLRTCPNRH-CSNCSLPGHTSDDC---LE 331
Query: 127 SGGDLRLCNNCYKPGHIAADCTNDKACKNCRKT-GHIARD-----CQNEPVCNLCNIAGH 180
+ C+ C GH C + T G I + CQ C C+ GH
Sbjct: 332 RAFWYKRCHRCGMTGHFIDACPQIWRQYHLTTTAGPIRKSADPKACQKRAYCYNCSRKGH 391
Query: 181 VARQC 185
QC
Sbjct: 392 FGHQC 396
Score = 116 (45.9 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 22/64 (34%), Positives = 37/64 (57%)
Query: 132 RLCNNCYKPGHIAADCT----NDKA--CKNCRKTGHIARDC---QNEPVCNLCNIAGHVA 182
++ N + P H+ T +K+ C+NC KTGH++++C + P C+LC + GH+
Sbjct: 249 QIYNKGHGPRHVPNRSTYRYYTEKSITCRNCNKTGHLSKNCPTLKKVPCCSLCGLRGHLL 308
Query: 183 RQCP 186
R CP
Sbjct: 309 RTCP 312
Score = 70 (29.7 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 14/38 (36%), Positives = 17/38 (44%)
Query: 225 CRSCNQMGHMSRDCVGPLII---CRNCGGRGHMAYECP 259
C +C+ GH S DC+ C CG GH CP
Sbjct: 316 CSNCSLPGHTSDDCLERAFWYKRCHRCGMTGHFIDACP 353
Score = 55 (24.4 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 245 CRNCGGRGHMAYECPSGRIADRGY 268
C NC +GH ++C R+ + Y
Sbjct: 383 CYNCSRKGHFGHQCSQRRMYNWSY 406
Score = 41 (19.5 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 5/14 (35%), Positives = 8/14 (57%)
Query: 225 CRSCNQMGHMSRDC 238
C +C++ GH C
Sbjct: 383 CYNCSRKGHFGHQC 396
>WB|WBGene00001601 [details] [associations]
symbol:glh-4 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0007276 "gamete generation"
evidence=IMP] [GO:0043186 "P granule" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0008432 "JUN kinase binding" evidence=IPI]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343
SMART:SM00490 GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
GO:GO:0003723 GO:GO:0042127 Gene3D:4.10.60.10 SUPFAM:SSF57756
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0007276
GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043186 GeneTree:ENSGT00620000087942
EMBL:AF079508 EMBL:FO081191 PIR:T32759 PIR:T43326
RefSeq:NP_491207.3 ProteinModelPortal:O76743 SMR:O76743
IntAct:O76743 STRING:O76743 PaxDb:O76743 PRIDE:O76743
EnsemblMetazoa:T12F5.3.1 EnsemblMetazoa:T12F5.3.2 GeneID:171941
KEGG:cel:CELE_T12F5.3 UCSC:T12F5.3.1 CTD:171941 WormBase:T12F5.3
InParanoid:O76743 NextBio:873335 Uniprot:O76743
Length = 1156
Score = 196 (74.1 bits), Expect = 3.3e-14, P = 3.3e-14
Identities = 42/116 (36%), Positives = 54/116 (46%)
Query: 70 CNNCGLPGHIASEC----TTQARCWNCREPGHMASNCHN----EGICHSCGKTGHRARDC 121
C+NCG GHI+ EC + C NC + GH AS+C G C +CG GH A DC
Sbjct: 572 CHNCGEEGHISKECDKPKVPRFPCRNCEQLGHFASDCDQPRVPRGPCRNCGIEGHFAVDC 631
Query: 122 STHVQSGGDLRLCNNCYKPGHIAADCTNDKA-------CKNCRKTGHIARDCQNEP 170
G C NC + GH A DC N++ C+ C + GH +C P
Sbjct: 632 DQPKVPRGP---CRNCGQEGHFAKDCQNERVRMEPTEPCRRCAEEGHWGYECPTRP 684
Score = 191 (72.3 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 42/113 (37%), Positives = 51/113 (45%)
Query: 89 CWNCREPGHMASNCHNEGI----CHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIA 144
C NC E GH++ C + C +C + GH A DC G C NC GH A
Sbjct: 572 CHNCGEEGHISKECDKPKVPRFPCRNCEQLGHFASDCDQPRVPRGP---CRNCGIEGHFA 628
Query: 145 ADCTNDKA----CKNCRKTGHIARDCQNEPV-------CNLCNIAGHVARQCP 186
DC K C+NC + GH A+DCQNE V C C GH +CP
Sbjct: 629 VDCDQPKVPRGPCRNCGQEGHFAKDCQNERVRMEPTEPCRRCAEEGHWGYECP 681
Score = 177 (67.4 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 38/109 (34%), Positives = 49/109 (44%)
Query: 51 CNNCKRPGHFAREC--PNVA--VCNNCGLPGHIASEC----TTQARCWNCREPGHMASNC 102
C+NC GH ++EC P V C NC GH AS+C + C NC GH A +C
Sbjct: 572 CHNCGEEGHISKECDKPKVPRFPCRNCEQLGHFASDCDQPRVPRGPCRNCGIEGHFAVDC 631
Query: 103 HN----EGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADC 147
G C +CG+ GH A+DC C C + GH +C
Sbjct: 632 DQPKVPRGPCRNCGQEGHFAKDCQNERVRMEPTEPCRRCAEEGHWGYEC 680
Score = 129 (50.5 bits), Expect = 9.6e-12, Sum P(3) = 9.6e-12
Identities = 29/71 (40%), Positives = 36/71 (50%)
Query: 128 GGDL-RLCNNCYKPGHIAADCTNDKA----CKNCRKTGHIARDCQNEPV----CNLCNIA 178
GG+ R C+NC + GHI+ +C K C+NC + GH A DC V C C I
Sbjct: 565 GGERPRGCHNCGEEGHISKECDKPKVPRFPCRNCEQLGHFASDCDQPRVPRGPCRNCGIE 624
Query: 179 GHVARQC--PK 187
GH A C PK
Sbjct: 625 GHFAVDCDQPK 635
Score = 102 (41.0 bits), Expect = 9.6e-12, Sum P(3) = 9.6e-12
Identities = 18/42 (42%), Positives = 23/42 (54%)
Query: 225 CRSCNQMGHMSRDC------VGPLIICRNCGGRGHMAYECPS 260
CR+C Q GH ++DC + P CR C GH YECP+
Sbjct: 641 CRNCGQEGHFAKDCQNERVRMEPTEPCRRCAEEGHWGYECPT 682
Score = 35 (17.4 bits), Expect = 9.6e-12, Sum P(3) = 9.6e-12
Identities = 6/12 (50%), Positives = 7/12 (58%)
Query: 96 GHMASNCHNEGI 107
GH AS N G+
Sbjct: 435 GHRASTAENSGL 446
>WB|WBGene00019537 [details] [associations]
symbol:K08D12.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] InterPro:IPR001878 Pfam:PF00098
PROSITE:PS50158 SMART:SM00343 GO:GO:0009792 GO:GO:0040007
GO:GO:0002119 GO:GO:0046872 GO:GO:0008270 GO:GO:0040011
GO:GO:0000003 GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
HOGENOM:HOG000186262 KO:K09250 OMA:FQFMSSS
GeneTree:ENSGT00510000047065 EMBL:FO081610 GeneID:176979
KEGG:cel:CELE_K08D12.3 UCSC:K08D12.3a.1 CTD:176979 NextBio:894830
RefSeq:NP_741323.1 ProteinModelPortal:Q966I7 SMR:Q966I7
STRING:Q966I7 PRIDE:Q966I7 EnsemblMetazoa:K08D12.3a.1
EnsemblMetazoa:K08D12.3a.2 WormBase:K08D12.3a InParanoid:Q966I7
ArrayExpress:Q966I7 Uniprot:Q966I7
Length = 151
Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 46/154 (29%), Positives = 68/154 (44%)
Query: 51 CNNCKRPGHFARECPNVAVCNNCGLPGHIASECTTQARCWNCREPGHMASNCHNEGI--- 107
C C++PGH +R CPN ++ G G + C+NC+E GH + +C G
Sbjct: 6 CYKCQQPGHISRNCPNGE--SDGGRRGGGGG-----STCYNCQETGHFSRDCPKGGSGGG 58
Query: 108 ----------CHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCR 157
C++CG GH +RDC + GG + Y + C NC
Sbjct: 59 QRGGGGGGGSCYNCGGRGHYSRDCPSARSEGG-----SGGYGGRGGEGRSFGGQKCYNCG 113
Query: 158 KTGHIARDCQN-----EPVCNLCNIAGHVARQCP 186
++GHI+R+C E C C GH++R CP
Sbjct: 114 RSGHISRECTESGSAEEKRCYQCQETGHISRDCP 147
Score = 176 (67.0 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 43/133 (32%), Positives = 64/133 (48%)
Query: 42 RRSFSQGNLCNNCKRPGHFARECPNVAVCNNCGLPGHIASECTTQARCWNCREPGHMASN 101
RR G+ C NC+ GHF+R+CP + G G C+NC GH + +
Sbjct: 28 RRGGGGGSTCYNCQETGHFSRDCPKGG--SGGGQRGGGGGG----GSCYNCGGRGHYSRD 81
Query: 102 CHNEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTN-----DKACKNC 156
C + G G R + + GG + C NC + GHI+ +CT +K C C
Sbjct: 82 CPSARSEGGSGGYGGRGGEGRSF---GG--QKCYNCGRSGHISRECTESGSAEEKRCYQC 136
Query: 157 RKTGHIARDCQNE 169
++TGHI+RDC ++
Sbjct: 137 QETGHISRDCPSQ 149
Score = 123 (48.4 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 37/131 (28%), Positives = 52/131 (39%)
Query: 70 CNNCGLPGHIASECTTQARCWNCREPGHMASNCHNEGICHSCGKTGHRARDCSTHVQSGG 129
C C PGHI+ C R G S C+N C +TGH +RDC GG
Sbjct: 6 CYKCQQPGHISRNCPN-GESDGGRRGGGGGSTCYN------CQETGHFSRDCPKGGSGGG 58
Query: 130 DLR------LCNNCYKPGHIAADCTNDKACKNCRKTGHIARDCQNEPV----CNLCNIAG 179
C NC GH + DC + ++ G+ R + C C +G
Sbjct: 59 QRGGGGGGGSCYNCGGRGHYSRDCPSARS--EGGSGGYGGRGGEGRSFGGQKCYNCGRSG 116
Query: 180 HVARQCPKGDS 190
H++R+C + S
Sbjct: 117 HISRECTESGS 127
Score = 99 (39.9 bits), Expect = 7.3e-09, Sum P(2) = 7.3e-09
Identities = 22/59 (37%), Positives = 29/59 (49%)
Query: 132 RLCNNCYKPGHIAADCTNDKACKNCRKTGHIARDCQNEPVCNLCNIAGHVARQCPKGDS 190
R C C +PGHI+ +C N ++ R+ G C N C GH +R CPKG S
Sbjct: 4 RNCYKCQQPGHISRNCPNGES-DGGRRGGGGGSTCYN------CQETGHFSRDCPKGGS 55
Score = 75 (31.5 bits), Expect = 7.3e-09, Sum P(2) = 7.3e-09
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 225 CRSCNQMGHMSRDCV--GPLII--CRNCGGRGHMAYECPS 260
C +C + GH+SR+C G C C GH++ +CPS
Sbjct: 109 CYNCGRSGHISRECTESGSAEEKRCYQCQETGHISRDCPS 148
Score = 54 (24.1 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 245 CRNCGGRGHMAYECPSGRIAD 265
C NCG GH++ EC A+
Sbjct: 109 CYNCGRSGHISRECTESGSAE 129
>TAIR|locus:2078526 [details] [associations]
symbol:AT3G42860 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=RCA] [GO:0009640 "photomorphogenesis"
evidence=RCA] [GO:0010212 "response to ionizing radiation"
evidence=RCA] [GO:0010388 "cullin deneddylation" evidence=RCA]
[GO:0016567 "protein ubiquitination" evidence=RCA] [GO:0016571
"histone methylation" evidence=RCA] [GO:0016579 "protein
deubiquitination" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] InterPro:IPR001878
InterPro:IPR010666 Pfam:PF00098 Pfam:PF06839 PROSITE:PS50158
SMART:SM00343 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 eggNOG:COG5082 Gene3D:4.10.60.10
SUPFAM:SSF57756 EMBL:AL138654 EMBL:AY065276 EMBL:AY133785
IPI:IPI00532574 PIR:T47344 RefSeq:NP_189872.1 UniGene:At.28534
ProteinModelPortal:Q9M1L9 SMR:Q9M1L9 EnsemblPlants:AT3G42860.1
GeneID:823332 KEGG:ath:AT3G42860 TAIR:At3g42860
HOGENOM:HOG000006218 InParanoid:Q9M1L9 OMA:CGFFKWC PhylomeDB:Q9M1L9
ProtClustDB:CLSN2684249 ArrayExpress:Q9M1L9 Genevestigator:Q9M1L9
Uniprot:Q9M1L9
Length = 372
Score = 176 (67.0 bits), Expect = 6.6e-13, P = 6.6e-13
Identities = 53/151 (35%), Positives = 71/151 (47%)
Query: 48 GNLCNNCKRPGHFAREC-------PNVAV-----CNNCGLPGHIASECTTQARCWNCR-E 94
G C C + GH+AR+C P + C CG PGH + +CT Q+ N + E
Sbjct: 236 GTPCYKCGKEGHWARDCTVQSDTGPVKSTSAAGDCFKCGKPGHWSRDCTAQSG--NPKYE 293
Query: 95 PGHMASNCHNEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHI-AADCTNDKAC 153
PG M S+ + G C+ CGK GH +RDC+ QS N ++ G + T D C
Sbjct: 294 PGQMKSSS-SSGECYKCGKQGHWSRDCTG--QSS------NQQFQSGQAKSTSSTGD--C 342
Query: 154 KNCRKTGHIARDCQNEPVCNLCNIAGHVARQ 184
C K GH +RDC + P N G RQ
Sbjct: 343 YKCGKAGHWSRDCTS-PA-QTTNTPGKRQRQ 371
Score = 126 (49.4 bits), Expect = 8.9e-06, P = 8.9e-06
Identities = 40/142 (28%), Positives = 50/142 (35%)
Query: 108 CHSCGKTGHRARDCSTHVQSG--------GDLRLCNNCYKPGHIAADCTNDKACKNCRKT 159
C+ CGK GH ARDC+ +G GD C C KPGH + DCT +
Sbjct: 239 CYKCGKEGHWARDCTVQSDTGPVKSTSAAGD---CFKCGKPGHWSRDCTAQSGNPKY-EP 294
Query: 160 GHIARDCQNEPVCNLCNIAGHVARQCPKGDSLXXXXXXXXXXXXXXXXXXXXXXXXXYVG 219
G + + + C C GH +R C G S
Sbjct: 295 GQM-KSSSSSGECYKCGKQGHWSRDCT-GQSSNQQFQSGQAKSTSSTGD----------- 341
Query: 220 YHDVICRSCNQMGHMSRDCVGP 241
C C + GH SRDC P
Sbjct: 342 -----CYKCGKAGHWSRDCTSP 358
Score = 125 (49.1 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 32/97 (32%), Positives = 46/97 (47%)
Query: 85 TQARCWNCREPGHMASNCHNE------------GICHSCGKTGHRARDCSTHVQSGGDLR 132
T C+ C + GH A +C + G C CGK GH +RDC+ QSG
Sbjct: 235 TGTPCYKCGKEGHWARDCTVQSDTGPVKSTSAAGDCFKCGKPGHWSRDCTA--QSG---- 288
Query: 133 LCNNCYKPGHIAADCTNDKACKNCRKTGHIARDCQNE 169
N Y+PG + + ++ + C C K GH +RDC +
Sbjct: 289 --NPKYEPGQMKSSSSSGE-CYKCGKQGHWSRDCTGQ 322
Score = 124 (48.7 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 31/102 (30%), Positives = 47/102 (46%)
Query: 43 RSFSQGNLCNNCKRPGHFAREC------PNV-----------AVCNNCGLPGHIASECTT 85
+S S C C +PGH++R+C P C CG GH + +CT
Sbjct: 262 KSTSAAGDCFKCGKPGHWSRDCTAQSGNPKYEPGQMKSSSSSGECYKCGKQGHWSRDCTG 321
Query: 86 QARCWNCREPGHMASNCHNEGICHSCGKTGHRARDCSTHVQS 127
Q+ N + A + + G C+ CGK GH +RDC++ Q+
Sbjct: 322 QSS--NQQFQSGQAKSTSSTGDCYKCGKAGHWSRDCTSPAQT 361
>TAIR|locus:2079859 [details] [associations]
symbol:AT3G43590 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158
SMART:SM00343 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 eggNOG:COG5082 Gene3D:4.10.60.10
SUPFAM:SSF57756 EMBL:AL391734 EMBL:AY099824 EMBL:BT002203
IPI:IPI00517919 RefSeq:NP_189945.1 UniGene:At.36254
ProteinModelPortal:Q9FYD1 SMR:Q9FYD1 IntAct:Q9FYD1 PRIDE:Q9FYD1
EnsemblPlants:AT3G43590.1 GeneID:823456 KEGG:ath:AT3G43590
TAIR:At3g43590 HOGENOM:HOG000071063 InParanoid:Q9FYD1 OMA:RECPNSS
PhylomeDB:Q9FYD1 ProtClustDB:CLSN2684404 ArrayExpress:Q9FYD1
Genevestigator:Q9FYD1 Uniprot:Q9FYD1
Length = 551
Score = 148 (57.2 bits), Expect = 7.6e-13, Sum P(2) = 7.6e-13
Identities = 41/136 (30%), Positives = 52/136 (38%)
Query: 70 CNNCGLPGHIASECTTQAR----CWNCREPGHMASNCHNEGICHSCGKTGHRARDCSTHV 125
C +CG GH + C T + C+ C H A C C+ C KTGHRA+DC
Sbjct: 168 CYSCGEQGHTSFNCPTPTKRRKPCFICGSLEHGAKQCSKGHDCYICKKTGHRAKDCPDKY 227
Query: 126 QSGGDLRLCNNCYKPGHIAADCT--------NDKACKNCRKTGHIARDCQNEP------- 170
++G +C C GH C D C C+ GH+ C EP
Sbjct: 228 KNGSKGAVCLRCGDFGHDMILCKYEYSKEDLKDVQCYICKSFGHL---CCVEPGNSLSWA 284
Query: 171 -VCNLCNIAGHVARQC 185
C C GH C
Sbjct: 285 VSCYRCGQLGHSGLAC 300
Score = 130 (50.8 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 39/163 (23%), Positives = 65/163 (39%)
Query: 46 SQGNLCNNCKRPGHFARECPNVAVCNNCGLPGHIASECTTQARCWNCREPGHMA----SN 101
S+G +C C GH ++ +C + E +C+ C+ GH+ N
Sbjct: 231 SKGAVCLRCGDFGH------DMILCKY-----EYSKEDLKDVQCYICKSFGHLCCVEPGN 279
Query: 102 CHNEGI-CHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCRKTG 160
+ + C+ CG+ GH C H + + N+ P + + C C + G
Sbjct: 280 SLSWAVSCYRCGQLGHSGLACGRHYEESNE----NDSATPERLF-NSREASECYRCGEEG 334
Query: 161 HIARDCQN------------EPVCNLCNIAGHVARQCPKGDSL 191
H AR+C N + +C CN +GH AR+CP +
Sbjct: 335 HFARECPNSSSISTSHGRESQTLCYRCNGSGHFARECPNSSQV 377
Score = 116 (45.9 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 32/106 (30%), Positives = 45/106 (42%)
Query: 51 CNNCKRPGHFARECPNVAV----CNNCGLPGHIASECTTQARCWNCREPGHMASNC---H 103
C +C GH + CP C CG H A +C+ C+ C++ GH A +C +
Sbjct: 168 CYSCGEQGHTSFNCPTPTKRRKPCFICGSLEHGAKQCSKGHDCYICKKTGHRAKDCPDKY 227
Query: 104 NEG----ICHSCGKTGHRARDCSTHVQSGGDLR--LCNNCYKPGHI 143
G +C CG GH C + S DL+ C C GH+
Sbjct: 228 KNGSKGAVCLRCGDFGHDMILCK-YEYSKEDLKDVQCYICKSFGHL 272
Score = 116 (45.9 bits), Expect = 9.8e-06, Sum P(2) = 9.8e-06
Identities = 42/158 (26%), Positives = 64/158 (40%)
Query: 46 SQGNLCNNCKRPGHFARECPNV-------AVCNNCGLPGHIASECTTQARCWNCREPGHM 98
S+G+ C CK+ GH A++CP+ AVC CG GH C + + ++
Sbjct: 205 SKGHDCYICKKTGHRAKDCPDKYKNGSKGAVCLRCGDFGHDMILCKYEYSKEDLKDVQ-- 262
Query: 99 ASNCHNEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPG---HIAADCTN--DKAC 153
C+ C GH C V+ G L +CY+ G H C +++
Sbjct: 263 ---------CYICKSFGHLC--C---VEPGNSLSWAVSCYRCGQLGHSGLACGRHYEESN 308
Query: 154 KNCRKTGHIARDCQNEPVCNLCNIAGHVARQCPKGDSL 191
+N T + + C C GH AR+CP S+
Sbjct: 309 ENDSATPERLFNSREASECYRCGEEGHFARECPNSSSI 346
Score = 90 (36.7 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 18/57 (31%), Positives = 25/57 (43%)
Query: 134 CNNCYKPGHIAADCTND----KACKNCRKTGHIARDCQNEPVCNLCNIAGHVARQCP 186
C +C + GH + +C K C C H A+ C C +C GH A+ CP
Sbjct: 168 CYSCGEQGHTSFNCPTPTKRRKPCFICGSLEHGAKQCSKGHDCYICKKTGHRAKDCP 224
Score = 76 (31.8 bits), Expect = 7.6e-13, Sum P(2) = 7.6e-13
Identities = 18/54 (33%), Positives = 24/54 (44%)
Query: 225 CRSCNQMGHMSRDCVGPLII-----------CRNCGGRGHMAYECP-SGRIADR 266
C C + GH +R+C I C C G GH A ECP S +++ R
Sbjct: 327 CYRCGEEGHFARECPNSSSISTSHGRESQTLCYRCNGSGHFARECPNSSQVSKR 380
Score = 62 (26.9 bits), Expect = 7.4e-07, Sum P(2) = 7.4e-07
Identities = 15/43 (34%), Positives = 17/43 (39%)
Query: 222 DVICRSCNQMGHMSRDCVGP------LIICRNCGGRGHMAYEC 258
DV C C GH+ CV P + C CG GH C
Sbjct: 260 DVQCYICKSFGHLC--CVEPGNSLSWAVSCYRCGQLGHSGLAC 300
Score = 51 (23.0 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 224 ICRSCNQMGHMSRDC 238
+C CN GH +R+C
Sbjct: 357 LCYRCNGSGHFAREC 371
>POMBASE|SPBP35G2.08c [details] [associations]
symbol:air1 "zinc knuckle TRAMP complex subunit Air1"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016075 "rRNA catabolic
process" evidence=ISO] [GO:0016076 "snRNA catabolic process"
evidence=ISO] [GO:0016077 "snoRNA catabolic process" evidence=ISO]
[GO:0016078 "tRNA catabolic process" evidence=ISO] [GO:0031499
"TRAMP complex" evidence=IDA] [GO:0043630 "ncRNA polyadenylation
involved in polyadenylation-dependent ncRNA catabolic process"
evidence=ISO] InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158
SMART:SM00343 PomBase:SPBP35G2.08c GO:GO:0005730 GO:GO:0046872
EMBL:CU329671 GO:GO:0008270 GenomeReviews:CU329671_GR GO:GO:0003676
RefSeq:NP_595383.2 HSSP:Q9H9Z2 STRING:Q9P795
EnsemblFungi:SPBP35G2.08c.1 GeneID:2541349 eggNOG:COG5082
OrthoDB:EOG4F21BK NextBio:20802458 GO:GO:0031499 GO:GO:0043630
GO:GO:0016075 GO:GO:0016077 GO:GO:0016076 GO:GO:0016078
Gene3D:4.10.60.10 InterPro:IPR016713 PIRSF:PIRSF018162
SUPFAM:SSF57756 Uniprot:Q9P795
Length = 315
Score = 172 (65.6 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 44/149 (29%), Positives = 61/149 (40%)
Query: 46 SQGNLCNNCKRPGHFARECPNVAVCNNCG-LPGHIASECTTQARCWNCREPGHMASNCHN 104
S+ +C+NCK GH +++CP+V +C CG + HI+ C +C NC GH+A+ C
Sbjct: 86 SESIVCHNCKGNGHISKDCPHV-LCTTCGAIDDHISVRCPWTKKCMNCGLLGHIAARCSE 144
Query: 105 EGICHSCGKTGHRA-RDCSTHVQSGGDLRLCNNCY--KPGHIAADCTN-DKACKNCRKTG 160
K G R R C T + L Y K + D + K C NC
Sbjct: 145 PR------KRGPRVCRTCHTDTHTSSTCPLIWRYYVEKEHPVRIDVSEVRKFCYNCASDE 198
Query: 161 HIARDCQNEPVCNLCNIAGHVARQCPKGD 189
H DC N CP G+
Sbjct: 199 HFGDDCTLPSRSNYPESTAFCEANCPSGN 227
Score = 122 (48.0 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 29/102 (28%), Positives = 45/102 (44%)
Query: 47 QGNLCNNCKRPGHFARECPNVAVCNNCGLPGHIASECTTQARCWNCRE-PGHMASNCHNE 105
+G+ + R +F + VC+NC GHI+ +C C C H++ C
Sbjct: 68 EGSEWADVSRGRYFGSDPSESIVCHNCKGNGHISKDCP-HVLCTTCGAIDDHISVRCPWT 126
Query: 106 GICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADC 147
C +CG GH A CS + G R+C C+ H ++ C
Sbjct: 127 KKCMNCGLLGHIAARCSEPRKRGP--RVCRTCHTDTHTSSTC 166
Score = 88 (36.0 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 142 HIAADCTNDKACKNCRKTGHIARDCQNEPVCNLCN-IAGHVARQCP 186
+ +D + C NC+ GHI++DC + +C C I H++ +CP
Sbjct: 80 YFGSDPSESIVCHNCKGNGHISKDCPHV-LCTTCGAIDDHISVRCP 124
Score = 62 (26.9 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 12/39 (30%), Positives = 18/39 (46%)
Query: 225 CRSCNQMGHMSRDCVGPLI----ICRNCGGRGHMAYECP 259
C +C +GH++ C P +CR C H + CP
Sbjct: 129 CMNCGLLGHIAARCSEPRKRGPRVCRTCHTDTHTSSTCP 167
>WB|WBGene00001598 [details] [associations]
symbol:glh-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0009791
"post-embryonic development" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] [GO:0016070 "RNA metabolic process"
evidence=ISS] [GO:0043186 "P granule" evidence=IDA] [GO:0003724
"RNA helicase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008432 "JUN kinase binding" evidence=IPI]
[GO:0043621 "protein self-association" evidence=IPI] [GO:0017151
"DEAD/H-box RNA helicase binding" evidence=IPI] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00098 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
GO:GO:0005524 GO:GO:0006915 GO:GO:0046872 GO:GO:0008270
GO:GO:0003723 GO:GO:0009791 GO:GO:0007281 Gene3D:4.10.60.10
SUPFAM:SSF57756 GO:GO:0016070 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
GeneTree:ENSGT00620000087942 EMBL:L19948 EMBL:U62772 EMBL:FO080897
PIR:A48686 PIR:C87818 PIR:T15132 RefSeq:NP_491963.1
ProteinModelPortal:P34689 SMR:P34689 IntAct:P34689 STRING:P34689
PaxDb:P34689 EnsemblMetazoa:T21G5.3 GeneID:172414
KEGG:cel:CELE_T21G5.3 UCSC:T21G5.3 CTD:172414 WormBase:T21G5.3
InParanoid:P34689 OMA:HRSNECT NextBio:875417 Uniprot:P34689
Length = 763
Score = 161 (61.7 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 40/129 (31%), Positives = 59/129 (45%)
Query: 47 QGNLCNNCKRPGHFARECPNVA------VCNNCGLPGHIASECTTQARCWNCREPGHMAS 100
+ N C NC++PGH + +CP VC NC PGH + ECT + + RE G
Sbjct: 156 RNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKP---RE-GRTGG 211
Query: 101 NCHNEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTND-KACKNCRKT 159
G ++ G G + G ++ C NC GH +A+C + C NC +
Sbjct: 212 FGGGAGFGNNGGNDGFGGDGGFGGGEERGPMK-CFNCKGEGHRSAECPEPPRGCFNCGEQ 270
Query: 160 GHIARDCQN 168
GH + +C N
Sbjct: 271 GHRSNECPN 279
Score = 136 (52.9 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 43/150 (28%), Positives = 60/150 (40%)
Query: 44 SFSQGNLCNNCKRPGHFARECPNVAVCNNCGLPGHIASECTTQAR------CWNCREPGH 97
SF GN + GH E N C NC PGH +S+C + C+NC++PGH
Sbjct: 138 SFGGGN--SGFGEGGHGGGERNNN--CFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGH 193
Query: 98 MASNCHNEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCR 157
+ C E G+TG G D + + G + C NC+
Sbjct: 194 TSRECTEERKPRE-GRTGGFGGGAGFGNNGGNDGFGGDGGFGGG----EERGPMKCFNCK 248
Query: 158 KTGHIARDCQNEPV-CNLCNIAGHVARQCP 186
GH + +C P C C GH + +CP
Sbjct: 249 GEGHRSAECPEPPRGCFNCGEQGHRSNECP 278
Score = 92 (37.4 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 225 CRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYECPS 260
C +C GH S +C P C NCG +GH + ECP+
Sbjct: 244 CFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNECPN 279
Score = 65 (27.9 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 43 RSFSQGNLCNNCKRPGHFAREC 64
R + +C NC++PGH +REC
Sbjct: 177 RKEREPRVCYNCQQPGHTSREC 198
Score = 53 (23.7 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 11/35 (31%), Positives = 14/35 (40%)
Query: 225 CRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYECP 259
C +C + GH S +C P G G A P
Sbjct: 264 CFNCGEQGHRSNECPNPAKPREGVEGEGPKATYVP 298
>UNIPROTKB|P34689 [details] [associations]
symbol:glh-1 "ATP-dependent RNA helicase glh-1"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0009791
GO:GO:0007281 Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0043186 GeneTree:ENSGT00620000087942 EMBL:L19948 EMBL:U62772
EMBL:FO080897 PIR:A48686 PIR:C87818 PIR:T15132 RefSeq:NP_491963.1
ProteinModelPortal:P34689 SMR:P34689 IntAct:P34689 STRING:P34689
PaxDb:P34689 EnsemblMetazoa:T21G5.3 GeneID:172414
KEGG:cel:CELE_T21G5.3 UCSC:T21G5.3 CTD:172414 WormBase:T21G5.3
InParanoid:P34689 OMA:HRSNECT NextBio:875417 Uniprot:P34689
Length = 763
Score = 161 (61.7 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 40/129 (31%), Positives = 59/129 (45%)
Query: 47 QGNLCNNCKRPGHFARECPNVA------VCNNCGLPGHIASECTTQARCWNCREPGHMAS 100
+ N C NC++PGH + +CP VC NC PGH + ECT + + RE G
Sbjct: 156 RNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKP---RE-GRTGG 211
Query: 101 NCHNEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTND-KACKNCRKT 159
G ++ G G + G ++ C NC GH +A+C + C NC +
Sbjct: 212 FGGGAGFGNNGGNDGFGGDGGFGGGEERGPMK-CFNCKGEGHRSAECPEPPRGCFNCGEQ 270
Query: 160 GHIARDCQN 168
GH + +C N
Sbjct: 271 GHRSNECPN 279
Score = 136 (52.9 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 43/150 (28%), Positives = 60/150 (40%)
Query: 44 SFSQGNLCNNCKRPGHFARECPNVAVCNNCGLPGHIASECTTQAR------CWNCREPGH 97
SF GN + GH E N C NC PGH +S+C + C+NC++PGH
Sbjct: 138 SFGGGN--SGFGEGGHGGGERNNN--CFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGH 193
Query: 98 MASNCHNEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCR 157
+ C E G+TG G D + + G + C NC+
Sbjct: 194 TSRECTEERKPRE-GRTGGFGGGAGFGNNGGNDGFGGDGGFGGG----EERGPMKCFNCK 248
Query: 158 KTGHIARDCQNEPV-CNLCNIAGHVARQCP 186
GH + +C P C C GH + +CP
Sbjct: 249 GEGHRSAECPEPPRGCFNCGEQGHRSNECP 278
Score = 92 (37.4 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 225 CRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYECPS 260
C +C GH S +C P C NCG +GH + ECP+
Sbjct: 244 CFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNECPN 279
Score = 65 (27.9 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 43 RSFSQGNLCNNCKRPGHFAREC 64
R + +C NC++PGH +REC
Sbjct: 177 RKEREPRVCYNCQQPGHTSREC 198
Score = 53 (23.7 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 11/35 (31%), Positives = 14/35 (40%)
Query: 225 CRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYECP 259
C +C + GH S +C P G G A P
Sbjct: 264 CFNCGEQGHRSNECPNPAKPREGVEGEGPKATYVP 298
>UNIPROTKB|Q65XV7 [details] [associations]
symbol:P0016H04.11 "Os05g0111000 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001878 InterPro:IPR004365
InterPro:IPR004591 InterPro:IPR007199 Pfam:PF00098 Pfam:PF01336
Pfam:PF04057 PROSITE:PS50158 SMART:SM00343 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 GO:GO:0006260 GO:GO:0008270
EMBL:AP008211 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
Gene3D:4.10.60.10 SUPFAM:SSF57756 EMBL:CM000142 InterPro:IPR013955
Pfam:PF08646 eggNOG:COG1599 KO:K07466 TIGRFAMs:TIGR00617
HOGENOM:HOG000162322 EMBL:AC079356 RefSeq:NP_001054445.1
UniGene:Os.53618 IntAct:Q65XV7 EnsemblPlants:LOC_Os05g02040.1
GeneID:4337594 KEGG:osa:4337594 OMA:RWTIKVR ProtClustDB:CLSN2695308
Uniprot:Q65XV7
Length = 951
Score = 159 (61.0 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 41/117 (35%), Positives = 53/117 (45%)
Query: 66 NVAVCNNCGLPGHIASEC---------TTQARCWNCREPGHMASNCHNEGICHSCGKTGH 116
N+ C+ CG GH A C T A + +A N +E C+ C + GH
Sbjct: 812 NLQTCSICGANGHSAQICHVGADMDMQETSAGGSSMGNYNSIAGNGSSE--CYKCKQPGH 869
Query: 117 RARDCSTHVQSGGDLRLCNNCYKPGHIAADC----TNDKACKNCRKTGHIARDCQNE 169
ARDC QS G L C C +PGH + DC T C C++ GH ARDC +
Sbjct: 870 YARDCPG--QSTGGLE-CFKCKQPGHFSRDCPVQSTGGSECFKCKQPGHFARDCPGQ 923
Score = 147 (56.8 bits), Expect = 7.0e-08, P = 7.0e-08
Identities = 24/60 (40%), Positives = 35/60 (58%)
Query: 51 CNNCKRPGHFARECPNVAV----CNNCGLPGHIASECTTQA----RCWNCREPGHMASNC 102
C CK+PGH+AR+CP + C C PGH + +C Q+ C+ C++PGH A +C
Sbjct: 861 CYKCKQPGHYARDCPGQSTGGLECFKCKQPGHFSRDCPVQSTGGSECFKCKQPGHFARDC 920
Score = 137 (53.3 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 39/128 (30%), Positives = 51/128 (39%)
Query: 72 NCGLPGHIASECTTQARCWNCREPGHMASNCHNEGICHSCGKTGHRARDCSTHVQ-SGGD 130
+ G+ +A+ Q C C GH A CH G +T + +G
Sbjct: 800 SAGMSTPLAATRNLQT-CSICGANGHSAQICH-VGADMDMQETSAGGSSMGNYNSIAGNG 857
Query: 131 LRLCNNCYKPGHIAADC----TNDKACKNCRKTGHIARDCQNEPV----CNLCNIAGHVA 182
C C +PGH A DC T C C++ GH +RDC + C C GH A
Sbjct: 858 SSECYKCKQPGHYARDCPGQSTGGLECFKCKQPGHFSRDCPVQSTGGSECFKCKQPGHFA 917
Query: 183 RQCPKGDS 190
R CP G S
Sbjct: 918 RDCP-GQS 924
>CGD|CAL0005378 [details] [associations]
symbol:orf19.4844 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0031499 "TRAMP complex" evidence=IEA]
[GO:0071035 "nuclear polyadenylation-dependent rRNA catabolic
process" evidence=IEA] [GO:0071037 "nuclear
polyadenylation-dependent snRNA catabolic process" evidence=IEA]
[GO:0071039 "nuclear polyadenylation-dependent CUT catabolic
process" evidence=IEA] [GO:0043629 "ncRNA polyadenylation"
evidence=IEA] [GO:0006400 "tRNA modification" evidence=IEA]
[GO:0071036 "nuclear polyadenylation-dependent snoRNA catabolic
process" evidence=IEA] [GO:0071031 "nuclear mRNA surveillance of
mRNA 3'-end processing" evidence=IEA] [GO:0071038 "nuclear
polyadenylation-dependent tRNA catabolic process" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0030674 "protein
binding, bridging" evidence=IEA] InterPro:IPR001878 Pfam:PF00098
PROSITE:PS50158 SMART:SM00343 CGD:CAL0005378 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 EMBL:AACQ01000001 EMBL:AACQ01000002
eggNOG:COG5082 Gene3D:4.10.60.10 InterPro:IPR016713
PIRSF:PIRSF018162 SUPFAM:SSF57756 KO:K12597 RefSeq:XP_723340.1
RefSeq:XP_723530.1 STRING:Q5APC1 GeneID:3634843 GeneID:3634974
KEGG:cal:CaO19.12307 KEGG:cal:CaO19.4844 Uniprot:Q5APC1
Length = 381
Score = 140 (54.3 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 28/81 (34%), Positives = 39/81 (48%)
Query: 46 SQGNLCNNCKRPGHFARECPNVAVCNNCG-LPGHIASECTTQARCWNCREPGHMASNCHN 104
S G LC NC + GH +C V +C+ CG + H S+C T C C E GH+ S C +
Sbjct: 83 SLGPLCANCYKRGHTRAKC-TVVICHKCGAIDDHYESQCPTTIICSRCGEKGHIVSQCKS 141
Query: 105 E----GICHSCGKTGHRARDC 121
+ C +C H +C
Sbjct: 142 KIRKRQYCRTCDSFKHGDENC 162
Score = 108 (43.1 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 21/54 (38%), Positives = 24/54 (44%)
Query: 133 LCNNCYKPGHIAADCTNDKACKNCRKTG-HIARDCQNEPVCNLCNIAGHVARQC 185
LC NCYK GH A CT C C H C +C+ C GH+ QC
Sbjct: 87 LCANCYKRGHTRAKCTV-VICHKCGAIDDHYESQCPTTIICSRCGEKGHIVSQC 139
Score = 105 (42.0 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 23/74 (31%), Positives = 33/74 (44%)
Query: 69 VCNNCGLPGHIASECTTQARCWNCRE-PGHMASNCHNEGICHSCGKTGHRARDCSTHVQS 127
+C NC GH ++CT C C H S C IC CG+ GH C + ++
Sbjct: 87 LCANCYKRGHTRAKCTVVI-CHKCGAIDDHYESQCPTTIICSRCGEKGHIVSQCKSKIRK 145
Query: 128 GGDLRLCNNCYKPG 141
R C++ +K G
Sbjct: 146 RQYCRTCDS-FKHG 158
Score = 57 (25.1 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 18/51 (35%), Positives = 22/51 (43%)
Query: 220 YHDVICRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYEC--P-SGRIADRG 267
+ I +S +Q G V P I C NC H EC P S RI + G
Sbjct: 166 WRSYITKSPSQ-GENEESSVLPRIYCYNCASNEHFGDECDKPRSSRIPNFG 215
>SGD|S000001341 [details] [associations]
symbol:AIR1 "Zinc knuckle protein" species:4932
"Saccharomyces cerevisiae" [GO:0071036 "nuclear
polyadenylation-dependent snoRNA catabolic process" evidence=IGI]
[GO:0071039 "nuclear polyadenylation-dependent CUT catabolic
process" evidence=IGI] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0071035 "nuclear polyadenylation-dependent rRNA
catabolic process" evidence=IGI] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IGI;IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0031499 "TRAMP complex" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0071031 "nuclear mRNA surveillance of mRNA 3'-end
processing" evidence=IGI] [GO:0043629 "ncRNA polyadenylation"
evidence=IDA] [GO:0071038 "nuclear polyadenylation-dependent tRNA
catabolic process" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0071037 "nuclear polyadenylation-dependent snRNA
catabolic process" evidence=IGI] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158
SMART:SM00343 SGD:S000001341 GO:GO:0005737 GO:GO:0005730
GO:GO:0046872 EMBL:BK006942 GO:GO:0008270 GO:GO:0003676
eggNOG:COG5082 OrthoDB:EOG4F21BK GO:GO:0031499 Gene3D:4.10.60.10
InterPro:IPR016713 PIRSF:PIRSF018162 SUPFAM:SSF57756 EMBL:Z37997
PIR:S48365 RefSeq:NP_012186.1 ProteinModelPortal:P40507 SMR:P40507
DIP:DIP-2700N IntAct:P40507 MINT:MINT-518330 STRING:P40507
PaxDb:P40507 PeptideAtlas:P40507 EnsemblFungi:YIL079C GeneID:854731
KEGG:sce:YIL079C CYGD:YIL079c GeneTree:ENSGT00510000048226
HOGENOM:HOG000000966 KO:K12597 OMA:HISADCK NextBio:977425
Genevestigator:P40507 GermOnline:YIL079C GO:GO:0043629
GO:GO:0071031 GO:GO:0071039 GO:GO:0071035 GO:GO:0071036
GO:GO:0071037 GO:GO:0071038 Uniprot:P40507
Length = 360
Score = 155 (59.6 bits), Expect = 6.2e-10, P = 6.2e-10
Identities = 37/121 (30%), Positives = 47/121 (38%)
Query: 51 CNNCKRPGHFARECPNVAVCNNCG-LPGHIASECTTQARCWNCREPGHMASNC-HN--EG 106
CNNC + GH R CP+V +C CG + H + C C NC GH S C H +
Sbjct: 76 CNNCSQRGHLKRNCPHV-ICTYCGFMDDHYSQHCPKAIICTNCNANGHYKSQCPHKWKKV 134
Query: 107 ICHSCGKTGHRARDC---------STHVQSGGDLRL----CNNCYKPGHIAADCTNDKAC 153
C C H C T + GD C NC GH DC ++
Sbjct: 135 FCTLCNSKRHSRERCPSIWRSYLLKTKDANQGDFDFQTVFCYNCGNAGHFGDDCAERRSS 194
Query: 154 K 154
+
Sbjct: 195 R 195
Score = 116 (45.9 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 25/83 (30%), Positives = 35/83 (42%)
Query: 108 CHSCGKTGHRARDCSTHVQSGGDLRLCNNC-YKPGHIAADCTNDKACKNCRKTGHIARDC 166
C++C + GH R+C HV +C C + H + C C NC GH C
Sbjct: 76 CNNCSQRGHLKRNCP-HV-------ICTYCGFMDDHYSQHCPKAIICTNCNANGHYKSQC 127
Query: 167 QNE---PVCNLCNIAGHVARQCP 186
++ C LCN H +CP
Sbjct: 128 PHKWKKVFCTLCNSKRHSRERCP 150
Score = 95 (38.5 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 24/85 (28%), Positives = 35/85 (41%)
Query: 86 QARCWNCREPGHMASNCHNEGICHSCG-KTGHRARDCSTHVQSGGDLRLCNNCYKPGHIA 144
+ +C NC + GH+ NC + IC CG H ++ C + +C NC GH
Sbjct: 73 EPKCNNCSQRGHLKRNCPHV-ICTYCGFMDDHYSQHCPKAI-------ICTNCNANGHYK 124
Query: 145 ADCTND--KA-CKNCRKTGHIARDC 166
+ C + K C C H C
Sbjct: 125 SQCPHKWKKVFCTLCNSKRHSRERC 149
Score = 81 (33.6 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 153 CKNCRKTGHIARDCQNEPVCNLCNIAG-HVARQCPK 187
C NC + GH+ R+C + +C C H ++ CPK
Sbjct: 76 CNNCSQRGHLKRNCPHV-ICTYCGFMDDHYSQHCPK 110
Score = 72 (30.4 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 13/40 (32%), Positives = 17/40 (42%)
Query: 223 VICRSCNQMGHMSRDCVGPL--IICRNCGGRGHMAYECPS 260
+IC +CN GH C + C C + H CPS
Sbjct: 112 IICTNCNANGHYKSQCPHKWKKVFCTLCNSKRHSRERCPS 151
Score = 54 (24.1 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 8/20 (40%), Positives = 10/20 (50%)
Query: 243 IICRNCGGRGHMAYECPSGR 262
+ C NCG GH +C R
Sbjct: 173 VFCYNCGNAGHFGDDCAERR 192
Score = 49 (22.3 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 7/19 (36%), Positives = 9/19 (47%)
Query: 220 YHDVICRSCNQMGHMSRDC 238
+ V C +C GH DC
Sbjct: 170 FQTVFCYNCGNAGHFGDDC 188
>WB|WBGene00001599 [details] [associations]
symbol:glh-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0009791
"post-embryonic development" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] [GO:0016070 "RNA metabolic process"
evidence=ISS] [GO:0043186 "P granule" evidence=IDA] [GO:0003724
"RNA helicase activity" evidence=IDA] [GO:0008432 "JUN kinase
binding" evidence=IPI] [GO:0043621 "protein self-association"
evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0009791
GO:GO:0007281 Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
EMBL:FO080958 GO:GO:0043186 GeneTree:ENSGT00620000087942
EMBL:U60194 EMBL:U60449 RefSeq:NP_491876.1
ProteinModelPortal:Q966L9 SMR:Q966L9 IntAct:Q966L9 STRING:Q966L9
PaxDb:Q966L9 EnsemblMetazoa:C55B7.1 GeneID:172361
KEGG:cel:CELE_C55B7.1 UCSC:C55B7.1.2 CTD:172361 WormBase:C55B7.1
HOGENOM:HOG000112735 InParanoid:Q966L9 OMA:PREGRNG NextBio:875199
Uniprot:Q966L9
Length = 974
Score = 151 (58.2 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 38/129 (29%), Positives = 58/129 (44%)
Query: 47 QGNLCNNCKRPGHFARECPNVA------VCNNCGLPGHIASECTTQARCWNCREPGHMAS 100
+ N C NC++PGH + +CP VC NC PGH + +C + + R
Sbjct: 369 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGF 428
Query: 101 NCHNEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTND-KACKNCRKT 159
N+G G G A + + G ++ C NC GH +A+C + C NC +
Sbjct: 429 GGGNDG-----GFGGGNAEGFGNN-EERGPMK-CFNCKGEGHRSAECPEPPRGCFNCGEQ 481
Query: 160 GHIARDCQN 168
GH + +C N
Sbjct: 482 GHRSNECPN 490
Score = 125 (49.1 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 34/128 (26%), Positives = 56/128 (43%)
Query: 70 CNNCGLPGHIASECTTQAR------CWNCREPGHMASNCHNEGICHSCGKTGHRARDCST 123
C NC PGH +++C + C+NC++PGH + +C E + R+ T
Sbjct: 373 CFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEE-------RKPREGRNGFT 425
Query: 124 HVQSGGDLRLCNNCYKPGHIAADCTNDKA----CKNCRKTGHIARDCQNEPV-CNLCNIA 178
GG+ + + G+ N++ C NC+ GH + +C P C C
Sbjct: 426 SGFGGGN----DGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQ 481
Query: 179 GHVARQCP 186
GH + +CP
Sbjct: 482 GHRSNECP 489
Score = 99 (39.9 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 108 CHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDK 151
C +C + GHR+ DC + + R+C NC +PGH + DC ++
Sbjct: 259 CFNCQQPGHRSNDCP-EPKKEREPRVCYNCQQPGHNSRDCPEER 301
Score = 97 (39.2 bits), Expect = 6.4e-09, Sum P(3) = 6.4e-09
Identities = 26/105 (24%), Positives = 44/105 (41%)
Query: 89 CWNCREPGHMASNC------HNEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGH 142
C+NC++PGH +++C +C++C + GH +RDC + R N + G
Sbjct: 373 CFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKP----REGRNGFTSGF 428
Query: 143 IAADCTNDKACKNCRKTGHIARDCQNEPVCNLCNIAGHVARQCPK 187
ND G + + C C GH + +CP+
Sbjct: 429 GGG---NDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPE 470
Score = 94 (38.1 bits), Expect = 6.4e-09, Sum P(3) = 6.4e-09
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 47 QGNLCNNCKRPGHFARECPNVA------VCNNCGLPGHIASECTTQAR 88
+ N C NC++PGH + +CP VC NC PGH + +C + +
Sbjct: 255 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 302
Score = 92 (37.4 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 225 CRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYECPS 260
C +C GH S +C P C NCG +GH + ECP+
Sbjct: 455 CFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNECPN 490
Score = 83 (34.3 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 17/43 (39%), Positives = 21/43 (48%)
Query: 225 CRSCNQMGHMSRDCVGPLI-----ICRNCGGRGHMAYECPSGR 262
C +C Q GH S DC P +C NC GH + +CP R
Sbjct: 373 CFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 415
Score = 59 (25.8 bits), Expect = 0.00067, Sum P(2) = 0.00066
Identities = 9/15 (60%), Positives = 11/15 (73%)
Query: 224 ICRSCNQMGHMSRDC 238
+C +C Q GH SRDC
Sbjct: 397 VCYNCQQPGHNSRDC 411
Score = 54 (24.1 bits), Expect = 6.4e-09, Sum P(3) = 6.4e-09
Identities = 11/35 (31%), Positives = 14/35 (40%)
Query: 225 CRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYECP 259
C +C + GH S +C P G G A P
Sbjct: 475 CFNCGEQGHRSNECPNPAKPREGAEGEGPKATYVP 509
>UNIPROTKB|Q966L9 [details] [associations]
symbol:glh-2 "ATP-dependent RNA helicase glh-2"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0009791
GO:GO:0007281 Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
EMBL:FO080958 GO:GO:0043186 GeneTree:ENSGT00620000087942
EMBL:U60194 EMBL:U60449 RefSeq:NP_491876.1
ProteinModelPortal:Q966L9 SMR:Q966L9 IntAct:Q966L9 STRING:Q966L9
PaxDb:Q966L9 EnsemblMetazoa:C55B7.1 GeneID:172361
KEGG:cel:CELE_C55B7.1 UCSC:C55B7.1.2 CTD:172361 WormBase:C55B7.1
HOGENOM:HOG000112735 InParanoid:Q966L9 OMA:PREGRNG NextBio:875199
Uniprot:Q966L9
Length = 974
Score = 151 (58.2 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 38/129 (29%), Positives = 58/129 (44%)
Query: 47 QGNLCNNCKRPGHFARECPNVA------VCNNCGLPGHIASECTTQARCWNCREPGHMAS 100
+ N C NC++PGH + +CP VC NC PGH + +C + + R
Sbjct: 369 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGF 428
Query: 101 NCHNEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTND-KACKNCRKT 159
N+G G G A + + G ++ C NC GH +A+C + C NC +
Sbjct: 429 GGGNDG-----GFGGGNAEGFGNN-EERGPMK-CFNCKGEGHRSAECPEPPRGCFNCGEQ 481
Query: 160 GHIARDCQN 168
GH + +C N
Sbjct: 482 GHRSNECPN 490
Score = 125 (49.1 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 34/128 (26%), Positives = 56/128 (43%)
Query: 70 CNNCGLPGHIASECTTQAR------CWNCREPGHMASNCHNEGICHSCGKTGHRARDCST 123
C NC PGH +++C + C+NC++PGH + +C E + R+ T
Sbjct: 373 CFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEE-------RKPREGRNGFT 425
Query: 124 HVQSGGDLRLCNNCYKPGHIAADCTNDKA----CKNCRKTGHIARDCQNEPV-CNLCNIA 178
GG+ + + G+ N++ C NC+ GH + +C P C C
Sbjct: 426 SGFGGGN----DGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQ 481
Query: 179 GHVARQCP 186
GH + +CP
Sbjct: 482 GHRSNECP 489
Score = 99 (39.9 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 108 CHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDK 151
C +C + GHR+ DC + + R+C NC +PGH + DC ++
Sbjct: 259 CFNCQQPGHRSNDCP-EPKKEREPRVCYNCQQPGHNSRDCPEER 301
Score = 97 (39.2 bits), Expect = 6.4e-09, Sum P(3) = 6.4e-09
Identities = 26/105 (24%), Positives = 44/105 (41%)
Query: 89 CWNCREPGHMASNC------HNEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGH 142
C+NC++PGH +++C +C++C + GH +RDC + R N + G
Sbjct: 373 CFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKP----REGRNGFTSGF 428
Query: 143 IAADCTNDKACKNCRKTGHIARDCQNEPVCNLCNIAGHVARQCPK 187
ND G + + C C GH + +CP+
Sbjct: 429 GGG---NDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPE 470
Score = 94 (38.1 bits), Expect = 6.4e-09, Sum P(3) = 6.4e-09
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 47 QGNLCNNCKRPGHFARECPNVA------VCNNCGLPGHIASECTTQAR 88
+ N C NC++PGH + +CP VC NC PGH + +C + +
Sbjct: 255 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 302
Score = 92 (37.4 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 225 CRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYECPS 260
C +C GH S +C P C NCG +GH + ECP+
Sbjct: 455 CFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNECPN 490
Score = 83 (34.3 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 17/43 (39%), Positives = 21/43 (48%)
Query: 225 CRSCNQMGHMSRDCVGPLI-----ICRNCGGRGHMAYECPSGR 262
C +C Q GH S DC P +C NC GH + +CP R
Sbjct: 373 CFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 415
Score = 59 (25.8 bits), Expect = 0.00067, Sum P(2) = 0.00066
Identities = 9/15 (60%), Positives = 11/15 (73%)
Query: 224 ICRSCNQMGHMSRDC 238
+C +C Q GH SRDC
Sbjct: 397 VCYNCQQPGHNSRDC 411
Score = 54 (24.1 bits), Expect = 6.4e-09, Sum P(3) = 6.4e-09
Identities = 11/35 (31%), Positives = 14/35 (40%)
Query: 225 CRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYECP 259
C +C + GH S +C P G G A P
Sbjct: 475 CFNCGEQGHRSNECPNPAKPREGAEGEGPKATYVP 509
>TAIR|locus:2156647 [details] [associations]
symbol:AT5G52380 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158
SMART:SM00343 EMBL:CP002688 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 EMBL:AB019226 Gene3D:4.10.60.10 SUPFAM:SSF57756
InterPro:IPR025836 Pfam:PF14392 EMBL:BT025034 IPI:IPI00544651
RefSeq:NP_200051.1 UniGene:At.29618 ProteinModelPortal:Q9FHC2
SMR:Q9FHC2 PRIDE:Q9FHC2 EnsemblPlants:AT5G52380.1 GeneID:835314
KEGG:ath:AT5G52380 TAIR:At5g52380 InParanoid:Q9FHC2 OMA:KLCYNCG
PhylomeDB:Q9FHC2 ProtClustDB:CLSN2686088 Genevestigator:Q9FHC2
Uniprot:Q9FHC2
Length = 268
Score = 145 (56.1 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 40/138 (28%), Positives = 54/138 (39%)
Query: 48 GNLCNNCKRPGHFARECPNVAVCNNCGLPGHIASECTTQARCWNCREPGHMASNC---HN 104
G C C H A+ CP SE C CR GH NC +N
Sbjct: 73 GEGCFICHSKTHIAKLCPE-------------KSEWERNKICLQCRRRGHSLKNCPEKNN 119
Query: 105 EG----ICHSCGKTGHRARDCSTHVQSGGD-LRLCNNCYKPGHIAADCTNDK-------- 151
E +C++CG TGH C ++ GG C C GHI+ +C +K
Sbjct: 120 ESSEKKLCYNCGDTGHSLSHCPYPMEDGGTKFASCFICKGQGHISKNCPENKHGIYPMGG 179
Query: 152 ACKNCRKTGHIARDCQNE 169
CK C H+ +DC ++
Sbjct: 180 CCKVCGSVAHLVKDCPDK 197
Score = 136 (52.9 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 32/120 (26%), Positives = 52/120 (43%)
Query: 89 CWNCREPGHMASNCHNEG------ICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGH 142
C+ C H+A C + IC C + GH ++C + +LC NC GH
Sbjct: 76 CFICHSKTHIAKLCPEKSEWERNKICLQCRRRGHSLKNCPEKNNESSEKKLCYNCGDTGH 135
Query: 143 IAADC--------TNDKACKNCRKTGHIARDC-QNE----PV---CNLCNIAGHVARQCP 186
+ C T +C C+ GHI+++C +N+ P+ C +C H+ + CP
Sbjct: 136 SLSHCPYPMEDGGTKFASCFICKGQGHISKNCPENKHGIYPMGGCCKVCGSVAHLVKDCP 195
>POMBASE|SPAC683.02c [details] [associations]
symbol:SPAC683.02c "zf-CCHC type zinc finger protein"
species:4896 "Schizosaccharomyces pombe" [GO:0005730 "nucleolus"
evidence=IDA] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 PomBase:SPAC683.02c
EMBL:CU329670 GO:GO:0005730 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 eggNOG:COG5082 Gene3D:4.10.60.10 SUPFAM:SSF57756
PIR:T50246 RefSeq:NP_594481.1 EnsemblFungi:SPAC683.02c.1
GeneID:2543491 KEGG:spo:SPAC683.02c HOGENOM:HOG000059608
OMA:FICHENG OrthoDB:EOG4P8JTN NextBio:20804503 Uniprot:Q9HFF2
Length = 218
Score = 141 (54.7 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 31/102 (30%), Positives = 48/102 (47%)
Query: 37 LRRETRRSFSQGNLCNNCKRPGHFARECP----NVAVCNNCGLPGHIASECTTQ-----A 87
LRR +R+ + C C++ GH ++CP NV++C CG H + C+ + A
Sbjct: 67 LRRINQRN--RDKFCFACRQQGHIVQDCPEAKDNVSICFRCGSKEHSLNACSKKGPLKFA 124
Query: 88 RCWNCREPGHMASNCHNE--------GICHSCGKTGHRARDC 121
+C+ C E GH++ C G C C H A+DC
Sbjct: 125 KCFICHENGHLSGQCEQNPKGLYPKGGCCKFCSSVHHLAKDC 166
Score = 126 (49.4 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 34/108 (31%), Positives = 48/108 (44%)
Query: 89 CWNCREPGHMASNC----HNEGICHSCGKTGHRARDCSTHVQSGGDLRL--CNNCYKPGH 142
C+ CR+ GH+ +C N IC CG H CS G L+ C C++ GH
Sbjct: 79 CFACRQQGHIVQDCPEAKDNVSICFRCGSKEHSLNACSKK----GPLKFAKCFICHENGH 134
Query: 143 IAADCT-NDKA-------CKNCRKTGHIARDCQNEPVCNLCNIA-GHV 181
++ C N K CK C H+A+DC N +++ GHV
Sbjct: 135 LSGQCEQNPKGLYPKGGCCKFCSSVHHLAKDCDQ---VNKDDVSFGHV 179
>SGD|S000002334 [details] [associations]
symbol:AIR2 "RNA-binding subunit of the TRAMP nuclear RNA
surveillance complex" species:4932 "Saccharomyces cerevisiae"
[GO:0030674 "protein binding, bridging" evidence=IMP] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IDA] [GO:0031499 "TRAMP complex" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IGI;IDA] [GO:0043629 "ncRNA
polyadenylation" evidence=IDA] [GO:0071039 "nuclear
polyadenylation-dependent CUT catabolic process" evidence=IGI]
[GO:0071036 "nuclear polyadenylation-dependent snoRNA catabolic
process" evidence=IGI] [GO:0071037 "nuclear
polyadenylation-dependent snRNA catabolic process" evidence=IGI]
[GO:0071031 "nuclear mRNA surveillance of mRNA 3'-end processing"
evidence=IGI] [GO:0071038 "nuclear polyadenylation-dependent tRNA
catabolic process" evidence=IDA] [GO:0071035 "nuclear
polyadenylation-dependent rRNA catabolic process" evidence=IGI]
[GO:0006400 "tRNA modification" evidence=IMP] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001878 Pfam:PF00098
PROSITE:PS50158 SMART:SM00343 SGD:S000002334 GO:GO:0005730
GO:GO:0046872 GO:GO:0008270 EMBL:BK006938 GO:GO:0030674
GO:GO:0003723 GO:GO:0006400 eggNOG:COG5082 OrthoDB:EOG4F21BK
GO:GO:0031499 Gene3D:4.10.60.10 InterPro:IPR016713
PIRSF:PIRSF018162 SUPFAM:SSF57756 GeneTree:ENSGT00510000048226
HOGENOM:HOG000000966 KO:K12597 GO:GO:0043629 GO:GO:0071031
GO:GO:0071039 GO:GO:0071035 GO:GO:0071036 GO:GO:0071037
GO:GO:0071038 EMBL:Z74223 EMBL:Z67750 PIR:S61037 RefSeq:NP_010106.1
PDB:2LLI PDB:3NYB PDBsum:2LLI PDBsum:3NYB ProteinModelPortal:Q12476
SMR:Q12476 DIP:DIP-2543N IntAct:Q12476 MINT:MINT-543316
STRING:Q12476 PaxDb:Q12476 PeptideAtlas:Q12476 EnsemblFungi:YDL175C
GeneID:851379 KEGG:sce:YDL175C CYGD:YDL175c
EvolutionaryTrace:Q12476 NextBio:968516 Genevestigator:Q12476
GermOnline:YDL175C Uniprot:Q12476
Length = 344
Score = 144 (55.7 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 36/123 (29%), Positives = 51/123 (41%)
Query: 51 CNNCKRPGHFARECPNVAVCNNCGLPG-HIASECTTQARCWNCREPGHMASNC-HN--EG 106
CNNC + GH ++CP++ +C+ CG H + C +C C E GH S C H +
Sbjct: 63 CNNCSQRGHLKKDCPHI-ICSYCGATDDHYSRHCPKAIQCSKCDEVGHYRSQCPHKWKKV 121
Query: 107 ICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCRKTGHIARDC 166
C C H C + + L N KP + C NC GH DC
Sbjct: 122 QCTLCKSKKHSKERCPS-IWRAYILVDDNEKAKPKVLPFHTIY---CYNCGGKGHFGDDC 177
Query: 167 QNE 169
+ +
Sbjct: 178 KEK 180
Score = 112 (44.5 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 21/54 (38%), Positives = 27/54 (50%)
Query: 134 CNNCYKPGHIAADCTNDKACKNCRKTG-HIARDCQNEPVCNLCNIAGHVARQCP 186
CNNC + GH+ DC + C C T H +R C C+ C+ GH QCP
Sbjct: 63 CNNCSQRGHLKKDCPHI-ICSYCGATDDHYSRHCPKAIQCSKCDEVGHYRSQCP 115
Score = 101 (40.6 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 25/83 (30%), Positives = 37/83 (44%)
Query: 88 RCWNCREPGHMASNCHNEGICHSCGKTG-HRARDCSTHVQSGGDLRLCNNCYKPGHIAAD 146
+C NC + GH+ +C + IC CG T H +R C +Q C+ C + GH +
Sbjct: 62 KCNNCSQRGHLKKDCPHI-ICSYCGATDDHYSRHCPKAIQ-------CSKCDEVGHYRSQ 113
Query: 147 CTND--KA-CKNCRKTGHIARDC 166
C + K C C+ H C
Sbjct: 114 CPHKWKKVQCTLCKSKKHSKERC 136
Score = 87 (35.7 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 153 CKNCRKTGHIARDCQNEPVCNLCNIAG-HVARQCPK 187
C NC + GH+ +DC + +C+ C H +R CPK
Sbjct: 63 CNNCSQRGHLKKDCPHI-ICSYCGATDDHYSRHCPK 97
Score = 63 (27.2 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 243 IICRNCGGRGHMAYECPSGR 262
I C NCGG+GH +C R
Sbjct: 162 IYCYNCGGKGHFGDDCKEKR 181
Score = 53 (23.7 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 220 YHDVICRSCNQMGHMSRDC 238
+H + C +C GH DC
Sbjct: 159 FHTIYCYNCGGKGHFGDDC 177
>WB|WBGene00017210 [details] [associations]
symbol:F07E5.5 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 GO:GO:0006898
GO:GO:0040010 GO:GO:0046872 GO:GO:0008270 GO:GO:0040011
GO:GO:0003676 GO:GO:0040035 eggNOG:COG5082 Gene3D:4.10.60.10
SUPFAM:SSF57756 EMBL:FO080110 PIR:T34410 RefSeq:NP_494168.1
ProteinModelPortal:P91223 SMR:P91223 STRING:P91223 PaxDb:P91223
EnsemblMetazoa:F07E5.5 GeneID:173564 KEGG:cel:CELE_F07E5.5
UCSC:F07E5.5 CTD:173564 WormBase:F07E5.5
GeneTree:ENSGT00510000047308 HOGENOM:HOG000021839 InParanoid:P91223
OMA:INDWRAA NextBio:880195 Uniprot:P91223
Length = 384
Score = 144 (55.7 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 32/96 (33%), Positives = 44/96 (45%)
Query: 85 TQARCWNCREPGHMASNC------HNEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCY 138
T + C++CREPGH ++C ++G+C CG H +C G C C
Sbjct: 227 TGSACFHCREPGHRLADCPKRNSSSSDGVCFKCGSMEHSIHECKKKGVKGFPYATCFVCK 286
Query: 139 KPGHIAADC---TN----DKACKN-CRKTGHIARDC 166
+ GHI+ DC N D C N C H+ RDC
Sbjct: 287 QVGHISRDCHQNVNGVYPDGGCCNVCGANTHLRRDC 322
Score = 115 (45.5 bits), Expect = 0.00020, P = 0.00020
Identities = 35/122 (28%), Positives = 49/122 (40%)
Query: 39 RETRRSFSQ-----GNLCNNCKRPGHFARECPNVAVCNNCGLPGHIASECTTQARCWNCR 93
RETRR Q G+ C +C+ PGH +CP ++ G+ C+ C
Sbjct: 214 RETRRIGRQDQKITGSACFHCREPGHRLADCPKRNSSSSDGV-------------CFKCG 260
Query: 94 EPGHMASNCHNEGI-------CHSCGKTGHRARDCSTHVQSG-GDLRLCNNCYKPGHIAA 145
H C +G+ C C + GH +RDC +V D CN C H+
Sbjct: 261 SMEHSIHECKKKGVKGFPYATCFVCKQVGHISRDCHQNVNGVYPDGGCCNVCGANTHLRR 320
Query: 146 DC 147
DC
Sbjct: 321 DC 322
>UNIPROTKB|G4MQ81 [details] [associations]
symbol:MGG_09256 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001878 PROSITE:PS50158 SMART:SM00343 GO:GO:0008270
GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756 KO:K12597
EMBL:CM001231 RefSeq:XP_003709886.1 ProteinModelPortal:G4MQ81
EnsemblFungi:MGG_09256T0 GeneID:2680192 KEGG:mgr:MGG_09256
Uniprot:G4MQ81
Length = 695
Score = 136 (52.9 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 32/123 (26%), Positives = 54/123 (43%)
Query: 46 SQGNLCNNCKRPGHFARECPNVAVCNNCGLPGHIASECTTQARCWNCREPGHMASNCHNE 105
S+ + C C + GH A +CP C +C H +++C + RC C+ GH+ +C E
Sbjct: 396 SKTDFCVICAKNGHRANDCPP-PTCRHCQNQDHTSAQCPKRVRCTKCQHLGHIKKSCP-E 453
Query: 106 GICHSCGKTGHR-ARDCST-HVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCRKTGHIA 163
+ + G+ A C+T H++ + C P +I + C +C H
Sbjct: 454 KLASAAGEAELECAVCCATDHLEDDCESLWCTYYPDPENIVKVQSIPAFCYSCGADNHFG 513
Query: 164 RDC 166
DC
Sbjct: 514 GDC 516
>UNIPROTKB|F1PQG8 [details] [associations]
symbol:ZCCHC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
GeneTree:ENSGT00530000063983 EMBL:AAEX03013862 EMBL:AAEX03013863
Ensembl:ENSCAFT00000039080 OMA:ILIRNET Uniprot:F1PQG8
Length = 280
Score = 130 (50.8 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 23/59 (38%), Positives = 31/59 (52%)
Query: 129 GDLRLCNNCYKPGHIAADCTNDKACKNCRKTGHIARDCQNEPVCNLCNIAGHVARQCPK 187
G + C C H++ CT D+ C C + GH++ C+ VCNLC GH QCPK
Sbjct: 207 GQPKTCFKCGSRTHMSGSCTQDR-CFRCGEEGHLSPYCRKGIVCNLCGKRGHAFAQCPK 264
Score = 126 (49.4 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 22/58 (37%), Positives = 30/58 (51%)
Query: 70 CNNCGLPGHIASECTTQARCWNCREPGHMASNCHNEGICHSCGKTGHRARDCSTHVQS 127
C CG H++ CT Q RC+ C E GH++ C +C+ CGK GH C V +
Sbjct: 212 CFKCGSRTHMSGSCT-QDRCFRCGEEGHLSPYCRKGIVCNLCGKRGHAFAQCPKAVHN 268
>UNIPROTKB|J9P281 [details] [associations]
symbol:ZCCHC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
GeneTree:ENSGT00530000063983 EMBL:AAEX03013862 EMBL:AAEX03013863
Ensembl:ENSCAFT00000048621 Uniprot:J9P281
Length = 291
Score = 130 (50.8 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 23/59 (38%), Positives = 31/59 (52%)
Query: 129 GDLRLCNNCYKPGHIAADCTNDKACKNCRKTGHIARDCQNEPVCNLCNIAGHVARQCPK 187
G + C C H++ CT D+ C C + GH++ C+ VCNLC GH QCPK
Sbjct: 218 GQPKTCFKCGSRTHMSGSCTQDR-CFRCGEEGHLSPYCRKGIVCNLCGKRGHAFAQCPK 275
Score = 126 (49.4 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 22/58 (37%), Positives = 30/58 (51%)
Query: 70 CNNCGLPGHIASECTTQARCWNCREPGHMASNCHNEGICHSCGKTGHRARDCSTHVQS 127
C CG H++ CT Q RC+ C E GH++ C +C+ CGK GH C V +
Sbjct: 223 CFKCGSRTHMSGSCT-QDRCFRCGEEGHLSPYCRKGIVCNLCGKRGHAFAQCPKAVHN 279
>ZFIN|ZDB-GENE-031030-9 [details] [associations]
symbol:zcchc9 "zinc finger, CCHC domain containing 9"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158
SMART:SM00343 ZFIN:ZDB-GENE-031030-9 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 eggNOG:COG5082 Gene3D:4.10.60.10 SUPFAM:SSF57756
InterPro:IPR025836 Pfam:PF14392 HOGENOM:HOG000059608 CTD:84240
HOVERGEN:HBG056034 OrthoDB:EOG49W2G3 EMBL:BC049028 IPI:IPI00484605
RefSeq:NP_938184.1 UniGene:Dr.79609 ProteinModelPortal:Q7ZUI6
STRING:Q7ZUI6 GeneID:386639 KEGG:dre:386639 InParanoid:Q7ZUI6
NextBio:20813967 ArrayExpress:Q7ZUI6 Uniprot:Q7ZUI6
Length = 256
Score = 128 (50.1 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 37/133 (27%), Positives = 58/133 (43%)
Query: 38 RRETRRSFSQGNL-CNNCKRPGHFARECPNVAVCNNCGLPGH-IASEC-TTQARCWNCRE 94
RR R++ + N+ C NC++PGH +CP NN G I C +T+ CR
Sbjct: 103 RRIKRQNTKKSNMICFNCRKPGHGLADCPEA---NNDEEMGRGICYRCGSTEHEIQRCRA 159
Query: 95 PGHMASNCHNEGICHSCGKTGHRARDCSTHVQ----SGGDLRLCNNCYKPGHIAADCTND 150
A + C CG+TGH ++ C + + +GG R+C + H DC
Sbjct: 160 KVDPAMGNYPYAKCFVCGQTGHLSKACPDNPKGLYAAGGCCRVCGSVE---HFQKDCPEH 216
Query: 151 KACKNCRKTGHIA 163
+ N G ++
Sbjct: 217 QNSTNSITLGRLS 229
Score = 119 (46.9 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 32/108 (29%), Positives = 48/108 (44%)
Query: 89 CWNCREPGHMASNC---HNE-----GICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKP 140
C+NCR+PGH ++C +N+ GIC+ CG T H + C V D + N Y
Sbjct: 117 CFNCRKPGHGLADCPEANNDEEMGRGICYRCGSTEHEIQRCRAKV----DPAMGNYPYAK 172
Query: 141 GHIAADCTN-DKACKNCRKTGHIARDCQNEPVCNLCNIAGHVARQCPK 187
+ + KAC + K + A C C +C H + CP+
Sbjct: 173 CFVCGQTGHLSKACPDNPKGLYAAGGC-----CRVCGSVEHFQKDCPE 215
>RGD|735084 [details] [associations]
symbol:Megf10 "multiple EGF-like domains 10" species:10116
"Rattus norvegicus" [GO:0001891 "phagocytic cup" evidence=ISO]
[GO:0014719 "satellite cell activation" evidence=ISO] [GO:0014816
"satellite cell differentiation" evidence=ISO] [GO:0014841
"satellite cell proliferation" evidence=ISO] [GO:0034109 "homotypic
cell-cell adhesion" evidence=ISO] [GO:0042552 "myelination"
evidence=NAS] [GO:0043654 "recognition of apoptotic cell"
evidence=ISO] [GO:0048641 "regulation of skeletal muscle tissue
development" evidence=ISO] [GO:0051147 "regulation of muscle cell
differentiation" evidence=ISO] [GO:0055001 "muscle cell
development" evidence=ISO] InterPro:IPR000742 PROSITE:PS50026
SMART:SM00181 RGD:735084 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0042552 PROSITE:PS01186 eggNOG:NOG12793 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 HOGENOM:HOG000294130 Pfam:PF12661
HSSP:P01132 OrthoDB:EOG42JNQJ IPI:IPI00371424 UniGene:Rn.224926
EMBL:L41686 ProteinModelPortal:Q63404 PhosphoSite:Q63404
UCSC:RGD:735084 HOVERGEN:HBG072163 InParanoid:Q63404
Genevestigator:Q63404 Uniprot:Q63404
Length = 220
Score = 125 (49.1 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 39/149 (26%), Positives = 53/149 (35%)
Query: 48 GNLCNNCKRPGHFARECPNVAVCNNCGLPGHIASECTTQARCWN---CREP---GHMASN 101
G C + PG +C C N G+ H+ EC+ + W C +P G N
Sbjct: 20 GAFCEDLCPPGKHGPQCEQRCPCQNGGVCHHVTGECSCPSG-WMGTVCGQPCPEGRFGKN 78
Query: 102 CHNEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCRKTGH 161
C E CH+ G C H G C + G C C N K H
Sbjct: 79 CSQECQCHNGGACDAATGQC--HCSPGYTGERCQDECPVGTYGVRCAETCRCVNGGKCYH 136
Query: 162 IARDCQNEPVCNLCNIAGHV--ARQCPKG 188
++ C +C +G AR CP+G
Sbjct: 137 VSGTC----LCE-AGFSGEFCEARLCPEG 160
>UNIPROTKB|F1S7I8 [details] [associations]
symbol:ZCCHC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
OMA:ERPLQDE GeneTree:ENSGT00530000063983 EMBL:CU606854
RefSeq:XP_003134416.1 Ensembl:ENSSSCT00000007891 GeneID:100519451
KEGG:ssc:100519451 Uniprot:F1S7I8
Length = 402
Score = 130 (50.8 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 23/59 (38%), Positives = 31/59 (52%)
Query: 129 GDLRLCNNCYKPGHIAADCTNDKACKNCRKTGHIARDCQNEPVCNLCNIAGHVARQCPK 187
G + C C H++ CT D+ C C + GH++ C+ VCNLC GH QCPK
Sbjct: 329 GQPKTCFKCGSRTHMSGSCTQDR-CFRCGEEGHLSPYCRKGIVCNLCGKRGHAFAQCPK 386
Score = 126 (49.4 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 22/58 (37%), Positives = 30/58 (51%)
Query: 70 CNNCGLPGHIASECTTQARCWNCREPGHMASNCHNEGICHSCGKTGHRARDCSTHVQS 127
C CG H++ CT Q RC+ C E GH++ C +C+ CGK GH C V +
Sbjct: 334 CFKCGSRTHMSGSCT-QDRCFRCGEEGHLSPYCRKGIVCNLCGKRGHAFAQCPKAVHN 390
>UNIPROTKB|A1A4J3 [details] [associations]
symbol:ZCCHC3 "Zinc finger, CCHC domain containing 3"
species:9913 "Bos taurus" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10
SUPFAM:SSF57756 CTD:85364 eggNOG:NOG263295 HOGENOM:HOG000115679
HOVERGEN:HBG068441 OMA:ERPLQDE OrthoDB:EOG461443 EMBL:DAAA02036379
EMBL:BC126595 IPI:IPI00716774 RefSeq:NP_001073703.1 UniGene:Bt.923
Ensembl:ENSBTAT00000002733 GeneID:507116 KEGG:bta:507116
GeneTree:ENSGT00530000063983 InParanoid:A1A4J3 NextBio:20867907
Uniprot:A1A4J3
Length = 404
Score = 130 (50.8 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 23/59 (38%), Positives = 31/59 (52%)
Query: 129 GDLRLCNNCYKPGHIAADCTNDKACKNCRKTGHIARDCQNEPVCNLCNIAGHVARQCPK 187
G + C C H++ CT D+ C C + GH++ C+ VCNLC GH QCPK
Sbjct: 331 GQPKTCFKCGSRTHMSGSCTQDR-CFRCGEEGHLSPYCRKGIVCNLCGKRGHAFAQCPK 388
Score = 128 (50.1 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 24/64 (37%), Positives = 32/64 (50%)
Query: 70 CNNCGLPGHIASECTTQARCWNCREPGHMASNCHNEGICHSCGKTGHRARDC--STHVQS 127
C CG H++ CT Q RC+ C E GH++ C +C+ CGK GH C + H
Sbjct: 336 CFKCGSRTHMSGSCT-QDRCFRCGEEGHLSPYCRKGIVCNLCGKRGHAFAQCPKAVHNSV 394
Query: 128 GGDL 131
G L
Sbjct: 395 GAQL 398
>UNIPROTKB|Q9NUD5 [details] [associations]
symbol:ZCCHC3 "Zinc finger CCHC domain-containing protein
3" species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10
SUPFAM:SSF57756 EMBL:AL034548 EMBL:BC069238 IPI:IPI00011550
RefSeq:NP_149080.2 UniGene:Hs.28608 UniGene:Hs.603608
ProteinModelPortal:Q9NUD5 SMR:Q9NUD5 IntAct:Q9NUD5
PhosphoSite:Q9NUD5 DMDM:23396534 PaxDb:Q9NUD5 PRIDE:Q9NUD5
Ensembl:ENST00000382352 GeneID:85364 KEGG:hsa:85364 UCSC:uc002wdf.3
CTD:85364 GeneCards:GC20P000278 H-InvDB:HIX0015550
H-InvDB:HIX0138064 HGNC:HGNC:16230 HPA:HPA042972 neXtProt:NX_Q9NUD5
PharmGKB:PA25806 eggNOG:NOG263295 HOGENOM:HOG000115679
HOVERGEN:HBG068441 InParanoid:Q9NUD5 OMA:ERPLQDE OrthoDB:EOG461443
PhylomeDB:Q9NUD5 GenomeRNAi:85364 NextBio:75891 Bgee:Q9NUD5
CleanEx:HS_ZCCHC3 Genevestigator:Q9NUD5 GermOnline:ENSG00000177764
Uniprot:Q9NUD5
Length = 404
Score = 130 (50.8 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 23/59 (38%), Positives = 31/59 (52%)
Query: 129 GDLRLCNNCYKPGHIAADCTNDKACKNCRKTGHIARDCQNEPVCNLCNIAGHVARQCPK 187
G + C C H++ CT D+ C C + GH++ C+ VCNLC GH QCPK
Sbjct: 331 GQPKTCFKCGSRTHMSGSCTQDR-CFRCGEEGHLSPYCRKGIVCNLCGKRGHAFAQCPK 388
Score = 126 (49.4 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 22/58 (37%), Positives = 30/58 (51%)
Query: 70 CNNCGLPGHIASECTTQARCWNCREPGHMASNCHNEGICHSCGKTGHRARDCSTHVQS 127
C CG H++ CT Q RC+ C E GH++ C +C+ CGK GH C V +
Sbjct: 336 CFKCGSRTHMSGSCT-QDRCFRCGEEGHLSPYCRKGIVCNLCGKRGHAFAQCPKAVHN 392
>RGD|1585203 [details] [associations]
symbol:Zcchc3 "zinc finger, CCHC domain containing 3"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
RGD:1585203 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 EMBL:CH474050
Gene3D:4.10.60.10 SUPFAM:SSF57756 CTD:85364 OMA:ERPLQDE
OrthoDB:EOG461443 GeneTree:ENSGT00530000063983 IPI:IPI00957928
RefSeq:XP_001072887.2 RefSeq:XP_002726297.1
Ensembl:ENSRNOT00000009859 GeneID:690005 KEGG:rno:690005
UCSC:RGD:1585203 NextBio:739977 Uniprot:D3ZZ10
Length = 400
Score = 129 (50.5 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 23/59 (38%), Positives = 31/59 (52%)
Query: 129 GDLRLCNNCYKPGHIAADCTNDKACKNCRKTGHIARDCQNEPVCNLCNIAGHVARQCPK 187
G + C C H++ CT D+ C C + GH++ C+ VCNLC GH QCPK
Sbjct: 327 GQPKTCFKCGSRTHMSGTCTQDR-CFRCGEEGHLSPYCRKVIVCNLCGKRGHAFAQCPK 384
Score = 125 (49.1 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 22/58 (37%), Positives = 30/58 (51%)
Query: 70 CNNCGLPGHIASECTTQARCWNCREPGHMASNCHNEGICHSCGKTGHRARDCSTHVQS 127
C CG H++ CT Q RC+ C E GH++ C +C+ CGK GH C V +
Sbjct: 332 CFKCGSRTHMSGTCT-QDRCFRCGEEGHLSPYCRKVIVCNLCGKRGHAFAQCPKAVHN 388
>UNIPROTKB|Q8N567 [details] [associations]
symbol:ZCCHC9 "Zinc finger CCHC domain-containing protein
9" species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0010923 "negative regulation of phosphatase activity"
evidence=IDA] InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158
SMART:SM00343 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
EMBL:CH471084 eggNOG:COG5082 Gene3D:4.10.60.10 SUPFAM:SSF57756
GO:GO:0010923 HOGENOM:HOG000059608 EMBL:AK314160 EMBL:AL512712
EMBL:BC032736 IPI:IPI00410284 RefSeq:NP_001124507.1
RefSeq:NP_001124508.1 RefSeq:NP_115656.1 UniGene:Hs.15536
ProteinModelPortal:Q8N567 SMR:Q8N567 IntAct:Q8N567
PhosphoSite:Q8N567 DMDM:116242852 PaxDb:Q8N567 PRIDE:Q8N567
Ensembl:ENST00000254037 Ensembl:ENST00000380199
Ensembl:ENST00000407610 Ensembl:ENST00000438268 GeneID:84240
KEGG:hsa:84240 UCSC:uc003khi.3 CTD:84240 GeneCards:GC05P080597
HGNC:HGNC:25424 HPA:HPA038404 neXtProt:NX_Q8N567
PharmGKB:PA134931870 HOVERGEN:HBG056034 InParanoid:Q8N567
OMA:DSQEVRE OrthoDB:EOG49W2G3 PhylomeDB:Q8N567 GenomeRNAi:84240
NextBio:73713 Bgee:Q8N567 CleanEx:HS_ZCCHC9 Genevestigator:Q8N567
GermOnline:ENSG00000131732 Uniprot:Q8N567
Length = 271
Score = 126 (49.4 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 31/97 (31%), Positives = 44/97 (45%)
Query: 89 CWNCREPGHMASNC----HNE----GICHSCGKTGHRARDCSTHVQSG-GDLRL--CNNC 137
C++CR+PGH ++C N+ GIC+ CG T H C V G+ C C
Sbjct: 130 CFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAKCFVC 189
Query: 138 YKPGHIAADCT-NDKA-------CKNCRKTGHIARDC 166
+ GH++ C N K CK C H+ +DC
Sbjct: 190 GEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDC 226
Score = 112 (44.5 bits), Expect = 0.00023, P = 0.00023
Identities = 33/133 (24%), Positives = 55/133 (41%)
Query: 39 RETRRSFSQGN--LCNNCKRPGHFARECPNVAVCNNCGLPGHIASEC-TTQARCWNCREP 95
R +R ++ N +C +C++PGH +CP A N + I C +T+ C+
Sbjct: 116 RRLKRQAAKKNAMVCFHCRKPGHGIADCP--AALENQDMGTGICYRCGSTEHEITKCKAK 173
Query: 96 GHMASNCHNEGICHSCGKTGHRARDCSTHVQS----GGDLRLCNNCYKPGHIAADCTNDK 151
A C CG+ GH +R C + + GG +LC + H+ DC +
Sbjct: 174 VDPALGEFPFAKCFVCGEMGHLSRSCPDNPKGLYADGGGCKLCGSVE---HLKKDCPESQ 230
Query: 152 ACKNCRKTGHIAR 164
+ G A+
Sbjct: 231 NSERMVTVGRWAK 243
>UNIPROTKB|F1ST82 [details] [associations]
symbol:ZCCHC7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
GO:GO:0005737 GO:GO:0005730 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
GeneTree:ENSGT00510000048226 KO:K12597 OMA:EAQIANN EMBL:CU855828
EMBL:CU861930 RefSeq:XP_003122068.1 Ensembl:ENSSSCT00000005885
GeneID:100520354 KEGG:ssc:100520354 Uniprot:F1ST82
Length = 545
Score = 113 (44.8 bits), Expect = 0.00057, P = 0.00057
Identities = 39/144 (27%), Positives = 52/144 (36%)
Query: 39 RETRRSFSQG-NL-CNNCKRPGHFARECP---NVAVCNNCGLPGHIASECTTQARCWNCR 93
R T R +S N+ C NC + GH ++ CP V C C GH+ C + C +C
Sbjct: 229 RWTYRYYSANKNVTCRNCNKCGHLSKNCPFPQKVRPCCLCSERGHLQYACPARF-CLDCS 287
Query: 94 EPGHMASNCHNEGI----CHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTN 149
P A C C C GH A C + KP + T
Sbjct: 288 LPMSSAHRCLERPSWRKRCDRCDMIGHYADACPEIWRQYHLTTKPGPPKKPKTPSGQSTL 347
Query: 150 DKACKNCRKTGHIARDCQNEPVCN 173
C NC + GH +C + N
Sbjct: 348 -VYCYNCGQEGHYGHECTERRMFN 370
Score = 107 (42.7 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 30/114 (26%), Positives = 50/114 (43%)
Query: 81 SECTTQARCWNCREPGHMASNCH--NEGI-CHSCGKTGHRARDCSTHVQSGGDLRLCNNC 137
S+ +A+ N R G + N+ + C +C K GH +++C + +R C C
Sbjct: 213 SDKDIEAQIGNKRSSGRWTYRYYSANKNVTCRNCNKCGHLSKNCPFPQK----VRPCCLC 268
Query: 138 YKPGHIAADCTNDKACKNCRKTGHIARDCQNEPV----CNLCNIAGHVARQCPK 187
+ GH+ C + C +C A C P C+ C++ GH A CP+
Sbjct: 269 SERGHLQYACPA-RFCLDCSLPMSSAHRCLERPSWRKRCDRCDMIGHYADACPE 321
Score = 65 (27.9 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 242 LIICRNCGGRGHMAYECPSGRIADRGY 268
L+ C NCG GH +EC R+ ++ +
Sbjct: 347 LVYCYNCGQEGHYGHECTERRMFNQTF 373
Score = 47 (21.6 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 7/16 (43%), Positives = 9/16 (56%)
Query: 223 VICRSCNQMGHMSRDC 238
V C +C Q GH +C
Sbjct: 348 VYCYNCGQEGHYGHEC 363
>MGI|MGI:1916335 [details] [associations]
symbol:Zcchc9 "zinc finger, CCHC domain containing 9"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0010923 "negative regulation of
phosphatase activity" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158
SMART:SM00343 MGI:MGI:1916335 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 eggNOG:COG5082 Gene3D:4.10.60.10 SUPFAM:SSF57756
GO:GO:0010923 HOGENOM:HOG000059608 CTD:84240 HOVERGEN:HBG056034
EMBL:BC010687 EMBL:BC024496 IPI:IPI00122218 RefSeq:NP_663428.2
UniGene:Mm.52356 ProteinModelPortal:Q8R1J3 SMR:Q8R1J3
PhosphoSite:Q8R1J3 PRIDE:Q8R1J3 GeneID:69085 KEGG:mmu:69085
UCSC:uc007rkb.1 InParanoid:Q8R1J3 NextBio:328566 Bgee:Q8R1J3
CleanEx:MM_ZCCHC9 Genevestigator:Q8R1J3
GermOnline:ENSMUSG00000021621 Uniprot:Q8R1J3
Length = 273
Score = 124 (48.7 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 30/98 (30%), Positives = 44/98 (44%)
Query: 89 CWNCREPGHMASNCH--------NEGICHSCGKTGHRARDCSTHVQSG-GDLRL--CNNC 137
C++CR+PGH ++C GIC+ CG T H C +V G+ C C
Sbjct: 130 CFHCRQPGHGIADCPAVLESQDMGTGICYRCGSTEHEMSKCRANVDPALGEFPFAKCFVC 189
Query: 138 YKPGHIAADCT-NDK-------ACKNCRKTGHIARDCQ 167
+ GH++ C N K +CK C H +DC+
Sbjct: 190 GEMGHLSRSCPDNTKGVYADGGSCKLCGSVEHFKKDCR 227
Score = 113 (44.8 bits), Expect = 0.00017, P = 0.00017
Identities = 33/120 (27%), Positives = 52/120 (43%)
Query: 39 RETRRSFSQGN--LCNNCKRPGHFARECPNVAVCNNCGLPGHIASEC-TTQARCWNCREP 95
R +R ++ N +C +C++PGH +CP V + G G I C +T+ CR
Sbjct: 116 RRLKRQAAKKNAMVCFHCRQPGHGIADCPAVLESQDMGT-G-ICYRCGSTEHEMSKCRAN 173
Query: 96 GHMASNCHNEGICHSCGKTGHRARDCSTHVQS----GGDLRLCNNCYKPGHIAADCTNDK 151
A C CG+ GH +R C + + GG +LC + H DC ++
Sbjct: 174 VDPALGEFPFAKCFVCGEMGHLSRSCPDNTKGVYADGGSCKLCGSVE---HFKKDCRENQ 230
>UNIPROTKB|E2RQ32 [details] [associations]
symbol:MEGF10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0055001 "muscle cell development"
evidence=IEA] [GO:0051147 "regulation of muscle cell
differentiation" evidence=IEA] [GO:0048641 "regulation of skeletal
muscle tissue development" evidence=IEA] [GO:0043654 "recognition
of apoptotic cell" evidence=IEA] [GO:0034109 "homotypic cell-cell
adhesion" evidence=IEA] [GO:0014841 "satellite cell proliferation"
evidence=IEA] [GO:0014816 "satellite cell differentiation"
evidence=IEA] [GO:0014719 "satellite cell activation" evidence=IEA]
[GO:0001891 "phagocytic cup" evidence=IEA] InterPro:IPR000742
InterPro:IPR011489 PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0001891 GO:GO:0048641
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
GO:GO:0055001 GO:GO:0034109 GO:GO:0014816 Pfam:PF12661
GeneTree:ENSGT00690000101691 GO:GO:0043654 GO:GO:0051147
OMA:FGCNLTC GO:GO:0014719 GO:GO:0014841 EMBL:AAEX03007755
ProteinModelPortal:E2RQ32 Ensembl:ENSCAFT00000000947 Uniprot:E2RQ32
Length = 1150
Score = 130 (50.8 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 41/149 (27%), Positives = 54/149 (36%)
Query: 48 GNLCNNCKRPGHFARECPNVAVCNNCGLPGHIASECTTQARCWN---CREP---GHMASN 101
G C + PG +C C N G+ H+ EC+ + W C +P G N
Sbjct: 218 GAFCEDLCPPGKHGPQCEQRCPCQNGGICHHVTGECSCPSG-WLGTVCGQPCPEGRFGKN 276
Query: 102 CHNEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCRKTGH 161
C E CH+ G C H G C + G C C N K H
Sbjct: 277 CSQECQCHNGGTCDAATGQC--HCSPGYTGERCQDECPVGTYGVRCAETCQCVNGGKCYH 334
Query: 162 IARDCQNEPVCNLCNIAG-HV-ARQCPKG 188
++ C +C AG H AR CP+G
Sbjct: 335 VSGSC----LCE-AGFAGEHCEARLCPEG 358
Score = 42 (19.8 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 8/31 (25%), Positives = 13/31 (41%)
Query: 219 GYHDVICRSCNQMGHMSRDCVGPLIICRNCG 249
G+ +C G ++C G + C N G
Sbjct: 650 GFTGALCNEVCPSGRFGKNCAG-VCTCTNNG 679
>UNIPROTKB|F1M4B9 [details] [associations]
symbol:F1M4B9 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001878 SMART:SM00343 GO:GO:0008270 GO:GO:0003676
Gene3D:4.10.60.10 IPI:IPI00391685 Ensembl:ENSRNOT00000032465
Uniprot:F1M4B9
Length = 157
Score = 112 (44.5 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 40/134 (29%), Positives = 59/134 (44%)
Query: 73 CGLPGHIASECTT-QARCWNCREPGHMASNC---HNEGICHSCGKTGHRARDCSTHVQSG 128
CG GH A EC +R + R G C GI + CG++GH A+ C + G
Sbjct: 9 CGWLGHWARECPIGDSRGYKIRSCGIQRFQCVFSSLPGIYYFCGESGHLAKVCDLYFGKG 68
Query: 129 GDL-----RLCNNCYKPGHIAADCTNDKACKN---CRKTGHIARD------CQNEPVCNL 174
G + + C +C K G A+ C +D + ++ C K G I RD C+ E +
Sbjct: 69 GYIAKEQEQCCYSCGKGG--ASGCDHDHSDEHFCSCGKFGCIQRDFTKVKCCRGEETDRI 126
Query: 175 ---CNIAGHVARQC 185
C+ A V+ C
Sbjct: 127 SIDCSKASEVSYYC 140
Score = 108 (43.1 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 41/129 (31%), Positives = 52/129 (40%)
Query: 54 CKRPGHFARECP----NVAVCNNCGLPGHIASECTTQARCWNCREPGHMASNC------- 102
C GH+ARECP +CG+ + + C E GH+A C
Sbjct: 9 CGWLGHWARECPIGDSRGYKIRSCGIQRFQCVFSSLPGIYYFCGESGHLAKVCDLYFGKG 68
Query: 103 -----HNEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCR 157
E C+SCGK G A C H S D C+ C K G I D T K C+
Sbjct: 69 GYIAKEQEQCCYSCGKGG--ASGCD-HDHS--DEHFCS-CGKFGCIQRDFTKVKCCRG-E 121
Query: 158 KTGHIARDC 166
+T I+ DC
Sbjct: 122 ETDRISIDC 130
>RGD|1307450 [details] [associations]
symbol:Zcchc9 "zinc finger, CCHC domain containing 9"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0010923 "negative regulation of phosphatase activity"
evidence=IEA;ISO] InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158
SMART:SM00343 RGD:1307450 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
eggNOG:COG5082 Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0010923
EMBL:CH473955 HOGENOM:HOG000059608 CTD:84240 HOVERGEN:HBG056034
OMA:DSQEVRE OrthoDB:EOG49W2G3 GeneTree:ENSGT00510000047308
EMBL:BC083695 IPI:IPI00555221 RefSeq:NP_001013174.1
UniGene:Rn.94285 Ensembl:ENSRNOT00000020111 GeneID:309986
KEGG:rno:309986 UCSC:RGD:1307450 InParanoid:Q5XII6 NextBio:661527
Genevestigator:Q5XII6 Uniprot:Q5XII6
Length = 271
Score = 123 (48.4 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 31/101 (30%), Positives = 45/101 (44%)
Query: 89 CWNCREPGHMASNCH--------NEGICHSCGKTGHRARDCSTHVQSG-GDLRL--CNNC 137
C++CR+PGH ++C GIC+ CG T H C +V G+ C C
Sbjct: 130 CFHCRQPGHGIADCPAVLESQDMGTGICYRCGSTEHEMTKCRANVDPALGEFPFAKCFVC 189
Query: 138 YKPGHIAADCT-NDKA-------CKNCRKTGHIARDC-QNE 169
+ GH++ C N K CK C H +DC +N+
Sbjct: 190 GEMGHLSRSCPDNTKGVYADGGGCKLCGSVEHFKKDCPENQ 230
Score = 113 (44.8 bits), Expect = 0.00017, P = 0.00017
Identities = 33/120 (27%), Positives = 52/120 (43%)
Query: 39 RETRRSFSQGN--LCNNCKRPGHFARECPNVAVCNNCGLPGHIASEC-TTQARCWNCREP 95
R +R ++ N +C +C++PGH +CP V + G G I C +T+ CR
Sbjct: 116 RRLKRQAAKKNAMVCFHCRQPGHGIADCPAVLESQDMGT-G-ICYRCGSTEHEMTKCRAN 173
Query: 96 GHMASNCHNEGICHSCGKTGHRARDCSTHVQS----GGDLRLCNNCYKPGHIAADCTNDK 151
A C CG+ GH +R C + + GG +LC + H DC ++
Sbjct: 174 VDPALGEFPFAKCFVCGEMGHLSRSCPDNTKGVYADGGGCKLCGSVE---HFKKDCPENQ 230
>UNIPROTKB|F1ML79 [details] [associations]
symbol:ZCCHC9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
OMA:DSQEVRE GeneTree:ENSGT00510000047308 EMBL:DAAA02021025
IPI:IPI00689669 UniGene:Bt.61596 Ensembl:ENSBTAT00000006931
Uniprot:F1ML79
Length = 271
Score = 123 (48.4 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 30/97 (30%), Positives = 44/97 (45%)
Query: 89 CWNCREPGHMASNC----HNE----GICHSCGKTGHRARDCSTHVQSG-GDLRL--CNNC 137
C++CR+PGH ++C N+ GIC+ CG T H C V G+ C C
Sbjct: 130 CFHCRQPGHGIADCPAALENQEMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAKCFVC 189
Query: 138 YKPGHIAADCT-NDKA-------CKNCRKTGHIARDC 166
+ GH++ C N K C+ C H+ +DC
Sbjct: 190 GEMGHLSRSCPDNPKGLYADGGGCRLCGSVEHMKKDC 226
Score = 110 (43.8 bits), Expect = 0.00039, P = 0.00039
Identities = 32/116 (27%), Positives = 50/116 (43%)
Query: 39 RETRRSFSQGN--LCNNCKRPGHFARECPNVAVCNNCGLPGHIASEC-TTQARCWNCREP 95
R +R ++ N +C +C++PGH +CP A N + I C +T+ C+
Sbjct: 116 RRLKRQAAKKNAMVCFHCRQPGHGIADCP--AALENQEMGTGICYRCGSTEHEITKCKAK 173
Query: 96 GHMASNCHNEGICHSCGKTGHRARDCSTHVQS----GGDLRLCNNCYKPGHIAADC 147
A C CG+ GH +R C + + GG RLC + H+ DC
Sbjct: 174 VDPALGEFPFAKCFVCGEMGHLSRSCPDNPKGLYADGGGCRLCGSVE---HMKKDC 226
>WB|WBGene00043995 [details] [associations]
symbol:F40F12.9 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158
SMART:SM00343 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
Gene3D:4.10.60.10 SUPFAM:SSF57756 EMBL:Z30215
GeneTree:ENSGT00390000010943 RefSeq:NP_001255048.1
ProteinModelPortal:D5MCP3 SMR:D5MCP3 EnsemblMetazoa:F40F12.9a.1
EnsemblMetazoa:F40F12.9a.2 GeneID:259311 KEGG:cel:CELE_F40F12.9
CTD:259311 WormBase:F40F12.9a Uniprot:D5MCP3
Length = 113
Score = 105 (42.0 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 20/38 (52%), Positives = 24/38 (63%)
Query: 224 ICRSCNQMGHMSRDCVGPLI-ICRNCGGRGHMAYECPS 260
IC +C+++GHMSRDC C CG RGH ECPS
Sbjct: 28 ICYNCHKLGHMSRDCPEEQPKACFKCGFRGHYYRECPS 65
Score = 101 (40.6 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 18/36 (50%), Positives = 21/36 (58%)
Query: 153 CKNCRKTGHIARDCQNE-P-VCNLCNIAGHVARQCP 186
C NC K GH++RDC E P C C GH R+CP
Sbjct: 29 CYNCHKLGHMSRDCPEEQPKACFKCGFRGHYYRECP 64
Score = 95 (38.5 bits), Expect = 0.00016, P = 0.00016
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 133 LCNNCYKPGHIAADCTND--KACKNCRKTGHIARDCQNE 169
+C NC+K GH++ DC + KAC C GH R+C ++
Sbjct: 28 ICYNCHKLGHMSRDCPEEQPKACFKCGFRGHYYRECPSQ 66
Score = 95 (38.5 bits), Expect = 0.00016, P = 0.00016
Identities = 16/40 (40%), Positives = 22/40 (55%)
Query: 49 NLCNNCKRPGHFARECPNVA--VCNNCGLPGHIASECTTQ 86
++C NC + GH +R+CP C CG GH EC +Q
Sbjct: 27 SICYNCHKLGHMSRDCPEEQPKACFKCGFRGHYYRECPSQ 66
Score = 95 (38.5 bits), Expect = 0.00016, P = 0.00016
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 86 QARCWNCREPGHMASNCHNEG--ICHSCGKTGHRARDCSTHVQ 126
Q+ C+NC + GHM+ +C E C CG GH R+C + ++
Sbjct: 26 QSICYNCHKLGHMSRDCPEEQPKACFKCGFRGHYYRECPSQIE 68
>UNIPROTKB|F6V033 [details] [associations]
symbol:ZCCHC9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
CTD:84240 OMA:DSQEVRE GeneTree:ENSGT00510000047308
EMBL:AAEX03002099 RefSeq:XP_536305.1 Ensembl:ENSCAFT00000013818
GeneID:479161 KEGG:cfa:479161 Uniprot:F6V033
Length = 271
Score = 121 (47.7 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 30/97 (30%), Positives = 43/97 (44%)
Query: 89 CWNCREPGHMASNC----HNE----GICHSCGKTGHRARDCSTHVQSG-GDLRL--CNNC 137
C++CR+PGH ++C N+ GIC+ CG T H C V G+ C C
Sbjct: 130 CFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAKCFVC 189
Query: 138 YKPGHIAADCT-NDKA-------CKNCRKTGHIARDC 166
+ GH++ C N K C+ C H +DC
Sbjct: 190 GEMGHLSRSCPDNPKGLYADGGCCRLCGSVEHFKKDC 226
Score = 109 (43.4 bits), Expect = 0.00052, P = 0.00052
Identities = 32/116 (27%), Positives = 49/116 (42%)
Query: 39 RETRRSFSQGN--LCNNCKRPGHFARECPNVAVCNNCGLPGHIASEC-TTQARCWNCREP 95
R +R ++ N +C +C++PGH +CP A N + I C +T+ C+
Sbjct: 116 RRLKRQAAKKNAMVCFHCRKPGHGIADCP--AALENQDMGTGICYRCGSTEHEITKCKAK 173
Query: 96 GHMASNCHNEGICHSCGKTGHRARDCSTHVQS----GGDLRLCNNCYKPGHIAADC 147
A C CG+ GH +R C + + GG RLC + H DC
Sbjct: 174 VDPALGEFPFAKCFVCGEMGHLSRSCPDNPKGLYADGGCCRLCGSVE---HFKKDC 226
>UNIPROTKB|Q22C00 [details] [associations]
symbol:TTHERM_01081690 "Putative uncharacterized protein"
species:312017 "Tetrahymena thermophila SB210" [GO:0004252
"serine-type endopeptidase activity" evidence=ISS]
InterPro:IPR000334 InterPro:IPR000742 Pfam:PF02015 SMART:SM00181
GO:GO:0005975 GO:GO:0004252 InterPro:IPR015500 PANTHER:PTHR10795
InterPro:IPR006212 InterPro:IPR009030 SMART:SM00261 SUPFAM:SSF57184
GO:GO:0008810 Gene3D:2.40.40.10 InterPro:IPR014733
InterPro:IPR009009 SUPFAM:SSF50685 EMBL:GG662684
RefSeq:XP_001030472.1 ProteinModelPortal:Q22C00
EnsemblProtists:EAR82809 GeneID:7842605 KEGG:tet:TTHERM_01081690
ProtClustDB:CLSZ2499145 Uniprot:Q22C00
Length = 548
Score = 118 (46.6 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 43/167 (25%), Positives = 63/167 (37%)
Query: 33 CDPPLRRETRRSFSQGNLCNNCKRPGHFARECPNVAVCNNCGLPGHIASECTTQARCWNC 92
CDP + T + + N C +C GH+ P C C P EC + C +C
Sbjct: 312 CDPTCK--TCSASNDANKCTSCNT-GHYLSSNPGQ--CTAC-TPSLNCQECYNSSTCTSC 365
Query: 93 REPGHMASN-CHN--EGICHSCGKTGHRARDCSTHVQSGG--DLRLCNNCYKPGHIAADC 147
+ + N C + C +C K A C T SG D +C + C
Sbjct: 366 VKGYVLIGNTCQATCDSTCKTCSKN-QDATQC-TSCNSGFYLDGTTVGSCVQCSQNCISC 423
Query: 148 TNDKACKNC-RKTGHIARDCQN--EPVCNLCNIAGHVARQCPKGDSL 191
T+ C NC T ++ CQ+ P C C + C +G +L
Sbjct: 424 TSKNNCLNCSNNTILVSGQCQSCTSP-CQTCQTSVTNCLSCVQGYTL 469
Score = 44 (20.5 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 10/36 (27%), Positives = 17/36 (47%)
Query: 225 CRSCNQMGHM--SRDCVGPLIICRNCGGRGHMAYEC 258
C SC+ G++ +C + C+NC G + C
Sbjct: 498 CTSCHT-GYLVLGGNCQPCQVPCQNCRGNPNSCTSC 532
>UNIPROTKB|F1RF07 [details] [associations]
symbol:ZCCHC9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0010923 "negative regulation of phosphatase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
GO:GO:0010923 CTD:84240 OMA:DSQEVRE GeneTree:ENSGT00510000047308
EMBL:CU928538 RefSeq:NP_001231149.1 UniGene:Ssc.1803
Ensembl:ENSSSCT00000015433 GeneID:100514154 KEGG:ssc:100514154
Uniprot:F1RF07
Length = 270
Score = 119 (46.9 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 32/110 (29%), Positives = 47/110 (42%)
Query: 89 CWNCREPGHMASNC----HNE----GICHSCGKTGHRARDCSTHVQSG-GDLRL--CNNC 137
C++CR+PGH ++C N+ GIC+ CG T H C V G+ C C
Sbjct: 129 CFHCRQPGHGIADCPAALENQEMGTGICYRCGSTEHEIIKCKAQVDPALGEFPFAKCFVC 188
Query: 138 YKPGHIAADCTNDKACKNCRKTGHIARDCQNEPVCNLCNIAGHVARQCPK 187
+ GH++ C ++ K G C C LC H + CP+
Sbjct: 189 GEMGHLSRSCPDNP--KGLYADG----GC-----CRLCGSVEHFKKDCPE 227
Score = 110 (43.8 bits), Expect = 0.00039, P = 0.00039
Identities = 33/120 (27%), Positives = 50/120 (41%)
Query: 39 RETRRSFSQGN--LCNNCKRPGHFARECPNVAVCNNCGLPGHIASEC-TTQARCWNCREP 95
R +R ++ N +C +C++PGH +CP A N + I C +T+ C+
Sbjct: 115 RRLKRQAAKKNAMVCFHCRQPGHGIADCP--AALENQEMGTGICYRCGSTEHEIIKCKAQ 172
Query: 96 GHMASNCHNEGICHSCGKTGHRARDCSTHVQS----GGDLRLCNNCYKPGHIAADCTNDK 151
A C CG+ GH +R C + + GG RLC + H DC K
Sbjct: 173 VDPALGEFPFAKCFVCGEMGHLSRSCPDNPKGLYADGGCCRLCGSVE---HFKKDCPESK 229
>UNIPROTKB|F1MAP4 [details] [associations]
symbol:Megf10 "Protein Megf10" species:10116 "Rattus
norvegicus" [GO:0001891 "phagocytic cup" evidence=IEA] [GO:0014719
"satellite cell activation" evidence=IEA] [GO:0014816 "satellite
cell differentiation" evidence=IEA] [GO:0014841 "satellite cell
proliferation" evidence=IEA] [GO:0034109 "homotypic cell-cell
adhesion" evidence=IEA] [GO:0043654 "recognition of apoptotic cell"
evidence=IEA] [GO:0048641 "regulation of skeletal muscle tissue
development" evidence=IEA] [GO:0051147 "regulation of muscle cell
differentiation" evidence=IEA] [GO:0055001 "muscle cell
development" evidence=IEA] InterPro:IPR000742 InterPro:IPR011489
PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181 RGD:735084
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0001891 GO:GO:0048641
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
GO:GO:0055001 GO:GO:0034109 GO:GO:0014816 Pfam:PF12661
GeneTree:ENSGT00690000101691 GO:GO:0043654 GO:GO:0051147 CTD:84466
OMA:FGCNLTC GO:GO:0014719 GO:GO:0014841 EMBL:AC095558
IPI:IPI00371424 RefSeq:NP_001094127.1 UniGene:Rn.224926
Ensembl:ENSRNOT00000037901 GeneID:291445 KEGG:rno:291445
NextBio:632612 Uniprot:F1MAP4
Length = 1145
Score = 125 (49.1 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 39/149 (26%), Positives = 53/149 (35%)
Query: 48 GNLCNNCKRPGHFARECPNVAVCNNCGLPGHIASECTTQARCWN---CREP---GHMASN 101
G C + PG +C C N G+ H+ EC+ + W C +P G N
Sbjct: 218 GAFCEDLCPPGKHGPQCEQRCPCQNGGVCHHVTGECSCPSG-WMGTVCGQPCPEGRFGKN 276
Query: 102 CHNEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCRKTGH 161
C E CH+ G C H G C + G C C N K H
Sbjct: 277 CSQECQCHNGGACDAATGQC--HCSPGYTGERCQDECPVGTYGVRCAETCRCVNGGKCYH 334
Query: 162 IARDCQNEPVCNLCNIAGHV--ARQCPKG 188
++ C +C +G AR CP+G
Sbjct: 335 VSGTC----LCE-AGFSGEFCEARLCPEG 358
Score = 42 (19.8 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 8/31 (25%), Positives = 13/31 (41%)
Query: 219 GYHDVICRSCNQMGHMSRDCVGPLIICRNCG 249
G+ +C G ++C G + C N G
Sbjct: 650 GFTGALCNEVCPSGRFGKNCAG-VCTCTNNG 679
>MGI|MGI:2685177 [details] [associations]
symbol:Megf10 "multiple EGF-like-domains 10" species:10090
"Mus musculus" [GO:0001891 "phagocytic cup" evidence=IDA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0006909 "phagocytosis" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007517 "muscle organ
development" evidence=IEA] [GO:0014719 "satellite cell activation"
evidence=IMP] [GO:0014816 "satellite cell differentiation"
evidence=ISO;IMP] [GO:0014841 "satellite cell proliferation"
evidence=IDA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0034109 "homotypic
cell-cell adhesion" evidence=ISO] [GO:0042995 "cell projection"
evidence=IEA] [GO:0043654 "recognition of apoptotic cell"
evidence=IMP;IDA] [GO:0048641 "regulation of skeletal muscle tissue
development" evidence=ISO] [GO:0051147 "regulation of muscle cell
differentiation" evidence=ISO] [GO:0055001 "muscle cell
development" evidence=ISO] InterPro:IPR000742 InterPro:IPR011489
PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181 MGI:MGI:2685177
GO:GO:0016021 GO:GO:0016323 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0042995 GO:GO:0001891 GO:GO:0048641 PROSITE:PS01186
eggNOG:NOG12793 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
GO:GO:0055001 GO:GO:0034109 GO:GO:0014816 HOGENOM:HOG000294130
Pfam:PF12661 GeneTree:ENSGT00690000101691 GO:GO:0043654 HSSP:P01132
GO:GO:0051147 CTD:84466 HOVERGEN:HBG108333 OMA:FGCNLTC
GO:GO:0014719 GO:GO:0014841 EMBL:AK147238 EMBL:AK148084
EMBL:AK166316 EMBL:BC075647 IPI:IPI00453778 RefSeq:NP_001001979.1
UniGene:Mm.297863 ProteinModelPortal:Q6DIB5 SMR:Q6DIB5
STRING:Q6DIB5 PhosphoSite:Q6DIB5 PRIDE:Q6DIB5
Ensembl:ENSMUST00000075770 Ensembl:ENSMUST00000139892 GeneID:70417
KEGG:mmu:70417 UCSC:uc008eyz.2 InParanoid:Q6DIB5 OrthoDB:EOG42JNQJ
ChiTaRS:MEGF10 NextBio:331567 Bgee:Q6DIB5 CleanEx:MM_MEGF10
Genevestigator:Q6DIB5 Uniprot:Q6DIB5
Length = 1147
Score = 125 (49.1 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 39/149 (26%), Positives = 53/149 (35%)
Query: 48 GNLCNNCKRPGHFARECPNVAVCNNCGLPGHIASECTTQARCWN---CREP---GHMASN 101
G C + PG C C N G+ H+ EC+ + W C +P G N
Sbjct: 218 GAFCEDLCPPGKHGPHCEQRCPCQNGGVCHHVTGECSCPSG-WMGTVCGQPCPEGRFGKN 276
Query: 102 CHNEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCRKTGH 161
C E CH+ G C H G C + G C C N K H
Sbjct: 277 CSQECQCHNGGTCDAATGQC--HCSPGYTGERCQDECPVGSYGVRCAEACRCVNGGKCYH 334
Query: 162 IARDCQNEPVCNLCNIAGHV--ARQCPKG 188
++ C +C +G + AR CP+G
Sbjct: 335 VSGTC----LCE-AGFSGELCEARLCPEG 358
Score = 42 (19.8 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 8/31 (25%), Positives = 13/31 (41%)
Query: 219 GYHDVICRSCNQMGHMSRDCVGPLIICRNCG 249
G+ +C G ++C G + C N G
Sbjct: 650 GFTGALCNEVCPSGRFGKNCAG-VCTCTNNG 679
>UNIPROTKB|Q96KG7 [details] [associations]
symbol:MEGF10 "Multiple epidermal growth factor-like
domains protein 10" species:9606 "Homo sapiens" [GO:0016021
"integral to membrane" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] [GO:0043654 "recognition of apoptotic cell"
evidence=IEA] [GO:0001891 "phagocytic cup" evidence=IEA]
[GO:0016323 "basolateral plasma membrane" evidence=IEA] [GO:0048641
"regulation of skeletal muscle tissue development" evidence=IMP]
[GO:0014719 "satellite cell activation" evidence=ISS] [GO:0014841
"satellite cell proliferation" evidence=ISS] [GO:0034109 "homotypic
cell-cell adhesion" evidence=IDA] [GO:0051147 "regulation of muscle
cell differentiation" evidence=IMP] [GO:0014816 "satellite cell
differentiation" evidence=IMP] [GO:0055001 "muscle cell
development" evidence=IMP] InterPro:IPR000742 InterPro:IPR011489
PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181 GO:GO:0016021
EMBL:CH471062 GO:GO:0016323 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0042995 GO:GO:0001891 GO:GO:0048641 PROSITE:PS01186
eggNOG:NOG12793 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
GO:GO:0055001 GO:GO:0034109 GO:GO:0014816 HOGENOM:HOG000294130
Pfam:PF12661 GO:GO:0043654 HSSP:P01132 GO:GO:0051147 EMBL:AB058676
EMBL:CR749437 EMBL:BC020198 EMBL:BC152478 IPI:IPI00064607
IPI:IPI00873983 RefSeq:NP_001243474.1 RefSeq:NP_115822.1
UniGene:Hs.438709 ProteinModelPortal:Q96KG7 SMR:Q96KG7
IntAct:Q96KG7 STRING:Q96KG7 PhosphoSite:Q96KG7 DMDM:74716908
PaxDb:Q96KG7 PRIDE:Q96KG7 Ensembl:ENST00000274473
Ensembl:ENST00000418761 Ensembl:ENST00000503335
Ensembl:ENST00000508365 GeneID:84466 KEGG:hsa:84466 UCSC:uc003kuh.4
UCSC:uc010jdc.1 CTD:84466 GeneCards:GC05P126654 HGNC:HGNC:29634
HPA:HPA026876 MIM:612453 MIM:614399 neXtProt:NX_Q96KG7
Orphanet:98920 PharmGKB:PA144596410 HOVERGEN:HBG108333
InParanoid:Q96KG7 OMA:FGCNLTC PhylomeDB:Q96KG7 GenomeRNAi:84466
NextBio:74274 Bgee:Q96KG7 CleanEx:HS_MEGF10 Genevestigator:Q96KG7
GO:GO:0014719 GO:GO:0014841 Uniprot:Q96KG7
Length = 1140
Score = 124 (48.7 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 40/149 (26%), Positives = 53/149 (35%)
Query: 48 GNLCNNCKRPGHFARECPNVAVCNNCGLPGHIASECTTQARCWN---CREP---GHMASN 101
G C + PG +C C N G+ H+ EC+ + W C +P G N
Sbjct: 218 GAFCEDLCPPGKHGPQCEQRCPCQNGGVCHHVTGECSCPSG-WMGTVCGQPCPEGRFGKN 276
Query: 102 CHNEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCRKTGH 161
C E CH+ G C H G C + G C C N K H
Sbjct: 277 CSQECQCHNGGTCDAATGQC--HCSPGYTGERCQDECPVGTYGVLCAETCQCVNGGKCYH 334
Query: 162 IARDCQNEPVCNLCNIAGH--VARQCPKG 188
++ C +C AG AR CP+G
Sbjct: 335 VSGAC----LCE-AGFAGERCEARLCPEG 358
Score = 43 (20.2 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 8/31 (25%), Positives = 13/31 (41%)
Query: 219 GYHDVICRSCNQMGHMSRDCVGPLIICRNCG 249
G+ +C G ++C G + C N G
Sbjct: 650 GFTGALCNEVCPSGRFGKNCAG-ICTCTNNG 679
Score = 43 (20.2 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 13/38 (34%), Positives = 17/38 (44%)
Query: 225 CRSCNQMGHMSRDCVGPLIICRNCGGRG-HMAYECPSG 261
C++ H+S C CR G G H +CPSG
Sbjct: 761 CQNGADCDHISGQCT-----CRT-GFMGRHCEQKCPSG 792
>UNIPROTKB|Q22C74 [details] [associations]
symbol:TTHERM_01075660 "Putative uncharacterized protein"
species:312017 "Tetrahymena thermophila SB210" [GO:0004252
"serine-type endopeptidase activity" evidence=ISS]
InterPro:IPR000742 SMART:SM00181 GO:GO:0004252 InterPro:IPR015500
PANTHER:PTHR10795 InterPro:IPR006212 InterPro:IPR009030
SMART:SM00261 SUPFAM:SSF57184 Gene3D:2.40.40.10 InterPro:IPR014733
InterPro:IPR009009 SUPFAM:SSF50685 ProtClustDB:CLSZ2499145
EMBL:GG662480 RefSeq:XP_001030545.1 ProteinModelPortal:Q22C74
EnsemblProtists:EAR82882 GeneID:7834210 KEGG:tet:TTHERM_01075660
Uniprot:Q22C74
Length = 820
Score = 120 (47.3 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 43/172 (25%), Positives = 67/172 (38%)
Query: 33 CDPPLRRETRRSFSQGNLCNNCKRPGHFARECPNVAVCNNCGLPGHIASECTTQARCWNC 92
CDP + T + + + C C G++ P CN C P EC+ C C
Sbjct: 312 CDPTCK--TCSASNDSSKCTACNT-GYYLSSNPGQ--CNACP-PALNCQECSNSTTCTTC 365
Query: 93 R------EPGHMASNCHNEGICHSCGKTGHRARDCST----HVQSGGDLRLCNNCYKPGH 142
+ + G C C +C T A C++ + SG + C+ C P +
Sbjct: 366 KTGFTLQKDGSCKKPCDQS--CKTCS-TPQDATQCTSCNDGYYLSGSSVGTCSKC--PSN 420
Query: 143 IAADCTNDKACKNCRKTGH-IARDCQ--NEPVCNLCNIAGHVARQCPKGDSL 191
+ CT++ +C+ C I+ CQ N P C C + C KG +L
Sbjct: 421 CTS-CTSNSSCQTCTDNYVLISGSCQPCNSP-CLSCKTDTNTCTSCVKGYTL 470
Score = 44 (20.5 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 16/53 (30%), Positives = 21/53 (39%)
Query: 221 HDV-ICRSCNQ----MGHMS-RDCVGPLIICRNCGGRGHMAYECPSGRIADRG 267
HD C SC +G+ + + C P C NC G + C SG G
Sbjct: 663 HDQNACTSCFDGFLILGNGNCQPCQPP---CFNCSGNPNNCTACASGYAVQNG 712
Score = 41 (19.5 bits), Expect = 9.1e-05, Sum P(2) = 9.1e-05
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 225 CRSCNQMGHMSRDCVGPLIICR-NC 248
C SCN +++ VG + C NC
Sbjct: 495 CTSCNTGFYLNGTNVGSCVQCSSNC 519
Score = 41 (19.5 bits), Expect = 9.1e-05, Sum P(2) = 9.1e-05
Identities = 11/38 (28%), Positives = 15/38 (39%)
Query: 225 CRSCNQ----MGHMSRDCVGPLIICRNCGGRGHMAYEC 258
C SC +G + C P C+NC G + C
Sbjct: 597 CTSCPTGYLVLGGNCQPCQKP---CQNCSGNPNSCTSC 631
>UNIPROTKB|E1BZR6 [details] [associations]
symbol:ZCCHC9 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0010923 "negative
regulation of phosphatase activity" evidence=IEA]
InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10
SUPFAM:SSF57756 GO:GO:0010923 CTD:84240 OMA:DSQEVRE
GeneTree:ENSGT00510000047308 EMBL:AADN02047870 IPI:IPI00571897
RefSeq:XP_424900.1 UniGene:Gga.34920 Ensembl:ENSGALT00000025157
GeneID:427320 KEGG:gga:427320 NextBio:20828598 Uniprot:E1BZR6
Length = 235
Score = 116 (45.9 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 32/114 (28%), Positives = 46/114 (40%)
Query: 89 CWNCREPGHMASNCH--------NEGICHSCGKTGHRARDCSTHVQSG-GDLRL--CNNC 137
C++CREPGH ++C GIC+ CG T H C + G C C
Sbjct: 95 CFHCREPGHGVADCPAVLESQDMGTGICYRCGSTEHDIGKCKAKIDPAVGAFPYAKCFIC 154
Query: 138 YKPGHIAADCTNDKACKNCRKTGHIARDCQNEPVCNLCNIAGHVARQCPKGDSL 191
+ GH++ C ++ K G C C LC H + CP+ +L
Sbjct: 155 GEMGHLSRSCPDNP--KGLYAEG----GC-----CRLCGSVEHYRKDCPENQNL 197
Score = 113 (44.8 bits), Expect = 0.00012, P = 0.00012
Identities = 34/120 (28%), Positives = 51/120 (42%)
Query: 39 RETRRSFSQGN--LCNNCKRPGHFARECPNVAVCNNCGLPGHIASEC-TTQARCWNCREP 95
R RR ++ N +C +C+ PGH +CP V + G G I C +T+ C+
Sbjct: 81 RRLRRQEARKNAMVCFHCREPGHGVADCPAVLESQDMGT-G-ICYRCGSTEHDIGKCKAK 138
Query: 96 GHMASNCHNEGICHSCGKTGHRARDCSTHVQS----GGDLRLCNNCYKPGHIAADCTNDK 151
A C CG+ GH +R C + + GG RLC + H DC ++
Sbjct: 139 IDPAVGAFPYAKCFICGEMGHLSRSCPDNPKGLYAEGGCCRLCGSVE---HYRKDCPENQ 195
>FB|FBgn0027594 [details] [associations]
symbol:drpr "draper" species:7227 "Drosophila melanogaster"
[GO:0007155 "cell adhesion" evidence=ISS] [GO:0008345 "larval
locomotory behavior" evidence=IMP] [GO:0006909 "phagocytosis"
evidence=IMP;TAS] [GO:0031224 "intrinsic to membrane" evidence=NAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0016322 "neuron
remodeling" evidence=IMP] [GO:0035212 "cell competition in a
multicellular organism" evidence=IMP] [GO:0048190 "wing disc
dorsal/ventral pattern formation" evidence=IGI] [GO:0043277
"apoptotic cell clearance" evidence=IMP] [GO:0035071 "salivary
gland cell autophagic cell death" evidence=IMP] InterPro:IPR000742
InterPro:IPR011489 PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181
GO:GO:0048190 EMBL:AE014296 GO:GO:0016322 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 GO:GO:0008345 GO:GO:0035071
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 GO:GO:0031224
GO:GO:0043277 Pfam:PF12661 GO:GO:0035212
GeneTree:ENSGT00690000101914 RefSeq:NP_728660.2 UniGene:Dm.3167
ProteinModelPortal:Q9W0A0 SMR:Q9W0A0 DIP:DIP-19640N
MINT:MINT-7555415 STRING:Q9W0A0 EnsemblMetazoa:FBtr0072799
GeneID:38218 KEGG:dme:Dmel_CG2086 UCSC:CG2086-RB CTD:38218
FlyBase:FBgn0027594 InParanoid:Q9W0A0 OMA:ALCDHIS OrthoDB:EOG4RXWF6
ChiTaRS:drpr GenomeRNAi:38218 NextBio:807575 Bgee:Q9W0A0
Uniprot:Q9W0A0
Length = 1031
Score = 121 (47.7 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 44/150 (29%), Positives = 59/150 (39%)
Query: 48 GNLCN-NCKRPGHFARECPNVAVCNNCGLPGHIASECT-----TQARCWNCREPGHMASN 101
G C+ NC PG + R C C N + + +C T ARC + G +N
Sbjct: 125 GPACDINCP-PGWYGRNCSMQCDCLNNAVCEPFSGDCECAKGYTGARCADICPEGFFGAN 183
Query: 102 CHNEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCRKTGH 161
C + C + GK H + +C G L C+ G A C D C+N K
Sbjct: 184 CSEKCRCENGGKCHHVSGECQCAPGFTGPL--CDMRCPDGKHGAQCQQDCPCQNDGK--- 238
Query: 162 IARDCQNEPVCNLCNIA--GHV-ARQCPKG 188
CQ E +CN G V A +CP G
Sbjct: 239 ----CQPETGACMCNPGWTGDVCANKCPVG 264
Score = 43 (20.2 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 14/56 (25%), Positives = 25/56 (44%)
Query: 219 GYHDVIC-RSCNQMGHMSRDCVGPLIICRN---CGGRGHMAYECPSGRIADRGYRR 270
G+ ++ C R C+ + H +DC + C N C + C +G +R R+
Sbjct: 469 GWKNIKCDRPCD-LNHFGQDCA-KVCDCHNNAACNPQNGSC-TCAAGWTGERCERK 521
Score = 38 (18.4 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 10/42 (23%), Positives = 16/42 (38%)
Query: 221 HDVICR-SCNQMGHMSRDCVGPLIICRNCGGRGHMAYECPSG 261
HD + C+ ++ D +C+ G H C SG
Sbjct: 529 HDCAQKCQCDFNNSLACDATNGRCVCKQDWGGVHCETNCRSG 570
>UNIPROTKB|E1C393 [details] [associations]
symbol:MEGF10 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0001891 "phagocytic cup" evidence=IEA]
[GO:0014719 "satellite cell activation" evidence=IEA] [GO:0014816
"satellite cell differentiation" evidence=IEA] [GO:0014841
"satellite cell proliferation" evidence=IEA] [GO:0034109 "homotypic
cell-cell adhesion" evidence=IEA] [GO:0043654 "recognition of
apoptotic cell" evidence=IEA] [GO:0048641 "regulation of skeletal
muscle tissue development" evidence=IEA] [GO:0051147 "regulation of
muscle cell differentiation" evidence=IEA] [GO:0055001 "muscle cell
development" evidence=IEA] InterPro:IPR000742 InterPro:IPR011489
PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181 InterPro:IPR013032
PROSITE:PS00022 GO:GO:0001891 GO:GO:0048641 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 GO:GO:0034109
Pfam:PF12661 GeneTree:ENSGT00690000101691 GO:GO:0051147 OMA:FGCNLTC
GO:GO:0014719 GO:GO:0014841 EMBL:AADN02073828 EMBL:AADN02073829
EMBL:AADN02073830 IPI:IPI00580976 ProteinModelPortal:E1C393
Ensembl:ENSGALT00000023694 Uniprot:E1C393
Length = 1132
Score = 119 (46.9 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
Identities = 43/151 (28%), Positives = 52/151 (34%)
Query: 48 GNLCNNCKRPGHFARECPNVAVCNNCGLPGHIASECT------TQAR-CWN-CREPGHMA 99
G C + PG +C C N G+ H+ EC TQ C C E G
Sbjct: 218 GAFCEDLCPPGKHGPQCEERCPCQNGGICHHVTGECACPPGWMTQGMVCGQPCPE-GRYG 276
Query: 100 SNCHNEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCRKT 159
+NC E CH+ G C H G C + G C C N K
Sbjct: 277 NNCSQECQCHNGGICDSATGQC--HCSPGYTGERCQDECPVGTYGVRCAETCQCMNGGKC 334
Query: 160 GHIARDCQNEPVCNLCNIAG-HV-ARQCPKG 188
HI+ C EP G H R CP+G
Sbjct: 335 YHISGACLCEP-----GYTGEHCETRLCPEG 360
Score = 46 (21.3 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
Identities = 8/31 (25%), Positives = 14/31 (45%)
Query: 219 GYHDVICRSCNQMGHMSRDCVGPLIICRNCG 249
G+ +C G ++C+G + C N G
Sbjct: 652 GFTGALCNEVCPSGRFGKNCIG-ICTCTNNG 681
>UNIPROTKB|F1MET4 [details] [associations]
symbol:MEGF10 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0055001 "muscle cell development" evidence=IEA]
[GO:0051147 "regulation of muscle cell differentiation"
evidence=IEA] [GO:0048641 "regulation of skeletal muscle tissue
development" evidence=IEA] [GO:0043654 "recognition of apoptotic
cell" evidence=IEA] [GO:0034109 "homotypic cell-cell adhesion"
evidence=IEA] [GO:0014841 "satellite cell proliferation"
evidence=IEA] [GO:0014816 "satellite cell differentiation"
evidence=IEA] [GO:0014719 "satellite cell activation" evidence=IEA]
[GO:0001891 "phagocytic cup" evidence=IEA] InterPro:IPR000742
InterPro:IPR011489 PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0001891 GO:GO:0048641
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS50027 GO:GO:0055001 GO:GO:0034109 GO:GO:0014816
Pfam:PF12661 GeneTree:ENSGT00690000101691 GO:GO:0043654
GO:GO:0051147 OMA:FGCNLTC GO:GO:0014719 GO:GO:0014841
EMBL:DAAA02019789 EMBL:DAAA02019790 EMBL:DAAA02019791
EMBL:DAAA02019792 IPI:IPI00742600 UniGene:Bt.64852
Ensembl:ENSBTAT00000000434 NextBio:20877803 ArrayExpress:F1MET4
Uniprot:F1MET4
Length = 1136
Score = 121 (47.7 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 39/149 (26%), Positives = 52/149 (34%)
Query: 48 GNLCNNCKRPGHFARECPNVAVCNNCGLPGHIASECTTQARCWN---CREP---GHMASN 101
G C + PG +C C N G+ H+ EC+ W C +P G N
Sbjct: 218 GAFCEDLCPPGKHGPQCEQRCPCQNGGVCHHVTGECSCPPG-WLGTVCGQPCPEGRFGKN 276
Query: 102 CHNEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCRKTGH 161
C E CH+ G C H G C + G C C N K H
Sbjct: 277 CSQECQCHNGGTCDAATGQC--HCSPGYTGERCQDECPVGTYGVHCAETCQCINGGKCYH 334
Query: 162 IARDCQNEPVCNLCNIAGH--VARQCPKG 188
++ C +C +G AR CP+G
Sbjct: 335 VSGSC----LCE-AGFSGDRCEARLCPEG 358
Score = 43 (20.2 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 8/31 (25%), Positives = 13/31 (41%)
Query: 219 GYHDVICRSCNQMGHMSRDCVGPLIICRNCG 249
G+ +C G ++C G + C N G
Sbjct: 650 GFTGALCNEVCPSGRFGKNCAG-ICTCTNNG 679
>TAIR|locus:2047092 [details] [associations]
symbol:GRP2B "glycine-rich protein 2B" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA;ISS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009409 "response
to cold" evidence=IEP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009790 "embryo
development" evidence=IMP] [GO:0010154 "fruit development"
evidence=IMP] InterPro:IPR001878 InterPro:IPR002059
InterPro:IPR011129 Pfam:PF00098 Pfam:PF00313 PRINTS:PR00050
PROSITE:PS50158 SMART:SM00343 SMART:SM00357 Prosite:PS00352
GO:GO:0005829 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0005730 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0009409 GO:GO:0008270 GO:GO:0003723 GO:GO:0009790
GO:GO:0010154 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
Gene3D:4.10.60.10 SUPFAM:SSF57756 HOGENOM:HOG000186262
InterPro:IPR019844 EMBL:AC006264 eggNOG:COG1278
ProtClustDB:CLSN2683565 EMBL:U39072 EMBL:AY057693 EMBL:BT021142
IPI:IPI00516457 PIR:F84596 RefSeq:NP_179702.1 UniGene:At.1680
ProteinModelPortal:Q38896 SMR:Q38896 PaxDb:Q38896 PRIDE:Q38896
EnsemblPlants:AT2G21060.1 GeneID:816641 KEGG:ath:AT2G21060
TAIR:At2g21060 InParanoid:Q38896 OMA:CFKCGEP PhylomeDB:Q38896
Genevestigator:Q38896 GermOnline:AT2G21060 Uniprot:Q38896
Length = 201
Score = 112 (44.5 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 26/64 (40%), Positives = 31/64 (48%)
Query: 89 CWNCREPGHMASNCHNEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCT 148
C+ C EPGHMA C G +S G G R GG L C +C + GH A DCT
Sbjct: 138 CFKCGEPGHMARECSQGGGGYSGGGGGGRYGSGGGGGGGGGGLS-CYSCGESGHFARDCT 196
Query: 149 NDKA 152
+ A
Sbjct: 197 SGGA 200
>UNIPROTKB|D6RAT4 [details] [associations]
symbol:CNBP "Cellular nucleic acid-binding protein"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10
SUPFAM:SSF57756 EMBL:AC108673 EMBL:AC135587 HGNC:HGNC:13164
ChiTaRS:CNBP IPI:IPI00965541 ProteinModelPortal:D6RAT4 SMR:D6RAT4
Ensembl:ENST00000512338 ArrayExpress:D6RAT4 Bgee:D6RAT4
Uniprot:D6RAT4
Length = 114
Score = 96 (38.9 bits), Expect = 0.00013, P = 0.00013
Identities = 20/59 (33%), Positives = 30/59 (50%)
Query: 108 CHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCRKTGHIARDC 166
C CG++GH AR+C T GG R + + G + C C ++GH+A+DC
Sbjct: 6 CFKCGRSGHWARECPT---GGGRGRGMRSRGRGGFQFVSSSLPDICYRCGESGHLAKDC 61
Score = 91 (37.1 bits), Expect = 0.00046, P = 0.00046
Identities = 21/56 (37%), Positives = 27/56 (48%)
Query: 70 CNNCGLPGHIASECTT---QARCWNCR-EPGHMASNCHNEGICHSCGKTGHRARDC 121
C CG GH A EC T + R R G + IC+ CG++GH A+DC
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFQFVSSSLPDICYRCGESGHLAKDC 61
>MGI|MGI:2442912 [details] [associations]
symbol:Zcchc7 "zinc finger, CCHC domain containing 7"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158
SMART:SM00343 MGI:MGI:2442912 GO:GO:0005737 GO:GO:0005730
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 EMBL:CH466565
eggNOG:COG5082 Gene3D:4.10.60.10 SUPFAM:SSF57756
GeneTree:ENSGT00510000048226 KO:K12597 CTD:84186
HOGENOM:HOG000155768 OrthoDB:EOG4P5KBB OMA:EAQIANN EMBL:AK013175
EMBL:AK043238 EMBL:AK050430 EMBL:AK157728 EMBL:AL805896
EMBL:AL805914 EMBL:BC054405 EMBL:BC117020 EMBL:BC117022
EMBL:BC144774 IPI:IPI00112298 IPI:IPI00227238 RefSeq:NP_613056.2
UniGene:Mm.331576 UniGene:Mm.486647 ProteinModelPortal:B1AX39
SMR:B1AX39 STRING:B1AX39 PhosphoSite:B1AX39 PRIDE:B1AX39
Ensembl:ENSMUST00000107824 Ensembl:ENSMUST00000147272 GeneID:319885
KEGG:mmu:319885 UCSC:uc008sry.2 UCSC:uc008ssa.2 InParanoid:B1AX39
ChiTaRS:ZCCHC7 NextBio:395583 Bgee:B1AX39 Genevestigator:B1AX39
Uniprot:B1AX39
Length = 541
Score = 111 (44.1 bits), Expect = 0.00097, P = 0.00097
Identities = 40/144 (27%), Positives = 53/144 (36%)
Query: 44 SFSQGNLCNNCKRPGHFARECP---NVAVCNNCGLPGHIASECTTQARCWNCREPGHMAS 100
S ++ C NC + GH ++ CP V C C GH+ C + C +C P M+S
Sbjct: 231 SVNKNVTCRNCDKRGHLSKNCPLPQKVRACCLCSERGHLQYGCPARY-CLDCSLP--MSS 287
Query: 101 N--CHNE----GICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCT--NDKA 152
N C C C GH A C + L KPG T A
Sbjct: 288 NHRCFERLSWRKRCDRCDMIGHHADACP---EIWRQYHLTT---KPGPPKKPKTPSGQSA 341
Query: 153 ---CKNCRKTGHIARDCQNEPVCN 173
C NC + GH +C + N
Sbjct: 342 LVYCYNCAQKGHYGHECTERRMFN 365
Score = 97 (39.2 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 31/132 (23%), Positives = 57/132 (43%)
Query: 66 NVAVCNNCGLPGHI---ASECTTQARCWNCREPGHMASNCH--NEGI-CHSCGKTGHRAR 119
N+ C G + S+ +A+ N R G + + N+ + C +C K GH ++
Sbjct: 190 NLVGCETAGAEDDVNWFISDKDIEAKIDNNRSSGRWNNRYYSVNKNVTCRNCDKRGHLSK 249
Query: 120 DCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCR---KTGHIARDCQN-EPVCNLC 175
+C + +R C C + GH+ C + C +C + H + + C+ C
Sbjct: 250 NCPLPQK----VRACCLCSERGHLQYGCPA-RYCLDCSLPMSSNHRCFERLSWRKRCDRC 304
Query: 176 NIAGHVARQCPK 187
++ GH A CP+
Sbjct: 305 DMIGHHADACPE 316
Score = 61 (26.5 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 242 LIICRNCGGRGHMAYECPSGRIADRGY 268
L+ C NC +GH +EC R+ ++ +
Sbjct: 342 LVYCYNCAQKGHYGHECTERRMFNQTF 368
>TAIR|locus:2057295 [details] [associations]
symbol:AT2G12880 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756 EMBL:AC006437
EMBL:AC007155 IPI:IPI00547403 PIR:C84504 RefSeq:NP_178944.1
UniGene:At.52721 ProteinModelPortal:Q9SKG2 SMR:Q9SKG2 PRIDE:Q9SKG2
EnsemblPlants:AT2G12880.1 GeneID:815767 KEGG:ath:AT2G12880
TAIR:At2g12880 eggNOG:KOG4400 InParanoid:Q9SKG2 PhylomeDB:Q9SKG2
ArrayExpress:Q9SKG2 Genevestigator:Q9SKG2 Uniprot:Q9SKG2
Length = 119
Score = 94 (38.1 bits), Expect = 0.00021, P = 0.00021
Identities = 26/87 (29%), Positives = 37/87 (42%)
Query: 40 ETRRSFSQGNLCNNCKRPGHFARECPNVAVCNNCGLPGHIASECTTQ-ARCWNCREPGHM 98
+ RR+ C C + GHFAR C H+ ++ TT C+ C E GH
Sbjct: 25 DRRRNDYDPRACYKCGKLGHFARSC-------------HVVTQPTTAYITCYFCSEEGHR 71
Query: 99 ASNCHNE--------GICHSCGKTGHR 117
++ C N+ G C+ CG HR
Sbjct: 72 SNGCPNKRTDQVNPKGHCYWCGNQDHR 98
>UNIPROTKB|P69730 [details] [associations]
symbol:gag "Gag polyprotein" species:11670 "Equine
infectious anemia virus (CLONE 1369)" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000721 InterPro:IPR001878
InterPro:IPR008916 InterPro:IPR008919 InterPro:IPR010999
InterPro:IPR012344 Pfam:PF00098 Pfam:PF00607 PROSITE:PS50158
SMART:SM00343 GO:GO:0019048 GO:GO:0046872 GO:GO:0005198
GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
GO:GO:0019028 EMBL:M16575 PIR:A03949 RefSeq:NP_056901.1
ProteinModelPortal:P69730 SMR:P69730 IntAct:P69730 GeneID:1489984
GO:GO:0019076 Gene3D:1.10.1200.30 Gene3D:1.10.150.90
Gene3D:1.10.375.10 InterPro:IPR014834 Pfam:PF08723 SUPFAM:SSF47353
SUPFAM:SSF47943 SUPFAM:SSF47836 Uniprot:P69730
Length = 486
Score = 116 (45.9 bits), Expect = 0.00021, P = 0.00021
Identities = 27/96 (28%), Positives = 44/96 (45%)
Query: 78 HIASECTTQARCWNCREPGHMASNCHNEGICHSCGKTGHRARDCSTHVQSGGDLRL---C 134
H+ E T + + + CR+ G + +TG A GG L+ C
Sbjct: 328 HLRPEDTLEEKMYACRDIGTTKQKMM---LLAKALQTG-LAGPFKGGALKGGPLKAAQTC 383
Query: 135 NNCYKPGHIAADCTNDKACKNCRKTGHIARDCQNEP 170
NC KPGH+++ C K C C++ GH ++ C++ P
Sbjct: 384 YNCGKPGHLSSQCRAPKVCFKCKQPGHFSKQCRSVP 419
Score = 115 (45.5 bits), Expect = 0.00029, P = 0.00029
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 70 CNNCGLPGHIASECTTQARCWNCREPGHMASNCHNEGICHSCGKTGHRAR 119
C NCG PGH++S+C C+ C++PGH + C + GK G + R
Sbjct: 383 CYNCGKPGHLSSQCRAPKVCFKCKQPGHFSKQCRS---VPKNGKQGAQGR 429
>ZFIN|ZDB-GENE-080506-1 [details] [associations]
symbol:megf10 "multiple EGF-like-domains 10"
species:7955 "Danio rerio" [GO:0030239 "myofibril assembly"
evidence=IMP] InterPro:IPR000742 InterPro:IPR011489 PROSITE:PS50026
PROSITE:PS51041 SMART:SM00181 ZFIN:ZDB-GENE-080506-1
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0030239 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS50027
Pfam:PF12661 GeneTree:ENSGT00690000101691 EMBL:CR396586
IPI:IPI00512925 Ensembl:ENSDART00000043936 Uniprot:E9QJQ6
Length = 1119
Score = 117 (46.2 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 32/124 (25%), Positives = 46/124 (37%)
Query: 48 GNLCNNCKRPGHFARECPNVAVCNNCGLPGHIASECTTQARCWN--CREP---GHMASNC 102
G C + PG ++C C N G+ H+ EC+ A W C +P G NC
Sbjct: 215 GAFCEDLCPPGKHGQQCEERCPCQNGGVCHHVTGECSCPAG-WGMVCGQPCPTGRFGKNC 273
Query: 103 HNEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCRKTGHI 162
E CH+ G C SG C + + G C+ C N + H+
Sbjct: 274 SQECQCHNGGICSPSTGQCVC--SSGYTGERCQDQCQVGTYGIGCSQACRCVNGAQCYHV 331
Query: 163 ARDC 166
+ C
Sbjct: 332 SGAC 335
Score = 44 (20.5 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 10/40 (25%), Positives = 17/40 (42%)
Query: 219 GYHDVICRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYEC 258
G+ + C +G +DCV C N H++ +C
Sbjct: 732 GWTGLYCTQRCPLGFYGKDCV-QACQCENGADCNHISGQC 770
Score = 39 (18.8 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 10/40 (25%), Positives = 14/40 (35%)
Query: 219 GYHDVICRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYEC 258
G+ +C G ++C G C N G M C
Sbjct: 646 GFKGALCNEVCPSGKFGKNCGGSCT-CTNNGTCSPMDGSC 684
>TAIR|locus:2183607 [details] [associations]
symbol:AT5G36240 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756 EMBL:AB026661
IPI:IPI00533303 RefSeq:NP_198473.1 UniGene:At.55159
ProteinModelPortal:Q9FG62 SMR:Q9FG62 PaxDb:Q9FG62 PRIDE:Q9FG62
EnsemblPlants:AT5G36240.1 GeneID:833621 KEGG:ath:AT5G36240
TAIR:At5g36240 eggNOG:NOG310171 HOGENOM:HOG000152454
InParanoid:Q9FG62 OMA:EGHFEHQ PhylomeDB:Q9FG62
ProtClustDB:CLSN2916402 Genevestigator:Q9FG62 Uniprot:Q9FG62
Length = 254
Score = 88 (36.0 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 29/102 (28%), Positives = 40/102 (39%)
Query: 103 HNEG---ICHSCGKTGHRARDCSTHVQSGGDLR-----LCNN-----CYKPGHIAADCTN 149
HN+ +C CG GH C + S DL+ +CN+ C +PGH + +
Sbjct: 20 HNDDEAEVCLRCGGFGHDMTLCK-YEYSHEDLKNIKCYVCNSLGHLCCIEPGHTQSWTVS 78
Query: 150 DKACKNCRKTGHIARDCQNE------PVCNLCNIAGHVARQC 185
C C + GH C P C +C GH QC
Sbjct: 79 ---CYRCGQLGHTGLACGRHYDDSVSPSCFICGREGHFEHQC 117
Score = 88 (36.0 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 29/113 (25%), Positives = 40/113 (35%)
Query: 50 LCNNCKRPGHFARECPNVAVCNNCGLPGHIASECTTQ--------ARCWNCREPGHMA-- 99
+C+ P H E VC CG GH + C + +C+ C GH+
Sbjct: 11 VCDPLIMPRHNDDEAE---VCLRCGGFGHDMTLCKYEYSHEDLKNIKCYVCNSLGHLCCI 67
Query: 100 SNCHNEG---ICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTN 149
H + C+ CG+ GH C H C C + GH C N
Sbjct: 68 EPGHTQSWTVSCYRCGQLGHTGLACGRHYDDSVSPS-CFICGREGHFEHQCHN 119
Score = 60 (26.2 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 8/17 (47%), Positives = 13/17 (76%)
Query: 244 ICRNCGGRGHMAYECPS 260
+C C G+GH+A +CP+
Sbjct: 196 LCYECKGKGHIARDCPN 212
>UNIPROTKB|Q8N3Z6 [details] [associations]
symbol:ZCCHC7 "Zinc finger CCHC domain-containing protein
7" species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
GO:GO:0005737 GO:GO:0005730 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 EMBL:CH471071 Gene3D:4.10.60.10 SUPFAM:SSF57756
KO:K12597 EMBL:AL158155 CTD:84186 OrthoDB:EOG4P5KBB EMBL:AK026264
EMBL:AK074608 EMBL:AK315128 EMBL:AL512604 EMBL:BC022434
EMBL:BC036940 EMBL:AF161349 IPI:IPI00166710 IPI:IPI00871360
RefSeq:NP_115602.2 UniGene:Hs.654700 ProteinModelPortal:Q8N3Z6
SMR:Q8N3Z6 MINT:MINT-1182798 STRING:Q8N3Z6 PhosphoSite:Q8N3Z6
DMDM:226693603 PaxDb:Q8N3Z6 PRIDE:Q8N3Z6 DNASU:84186
Ensembl:ENST00000322831 Ensembl:ENST00000336755 GeneID:84186
KEGG:hsa:84186 UCSC:uc003zzq.3 UCSC:uc003zzs.1
GeneCards:GC09P037120 HGNC:HGNC:26209 HPA:HPA020600 HPA:HPA021088
HPA:HPA029522 neXtProt:NX_Q8N3Z6 PharmGKB:PA128394734
eggNOG:NOG249334 HOVERGEN:HBG094757 InParanoid:Q8N3Z6 OMA:EAQIANN
GenomeRNAi:84186 NextBio:73566 ArrayExpress:Q8N3Z6 Bgee:Q8N3Z6
CleanEx:HS_ZCCHC7 Genevestigator:Q8N3Z6 GermOnline:ENSG00000147905
Uniprot:Q8N3Z6
Length = 543
Score = 115 (45.5 bits), Expect = 0.00033, P = 0.00033
Identities = 39/147 (26%), Positives = 56/147 (38%)
Query: 39 RETRRSFSQGN--LCNNCKRPGHFARECP---NVAVCNNCGLPGHIASECTTQARCWNCR 93
R T+R +S +C NC + GH ++ CP V C C GH+ C C C
Sbjct: 229 RWTQRYYSANKNIICRNCDKRGHLSKNCPLPRKVRRCFLCSRRGHLLYSCPAPL-CEYCP 287
Query: 94 EPGHMASNC---HN-EGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTN 149
P + +C H+ + C C GH C T + R + KPG T
Sbjct: 288 VPKMLDHSCLFRHSWDKQCDRCHMLGHYTDAC-TEIW-----RQYHLTTKPGPPKKPKTP 341
Query: 150 DKA-----CKNCRKTGHIARDCQNEPV 171
+ C +C + GH +C V
Sbjct: 342 SRPSALAYCYHCAQKGHYGHECPEREV 368
>UNIPROTKB|P05890 [details] [associations]
symbol:gag "Gag polyprotein" species:11701 "Human
immunodeficiency virus type 1 (RF/HAT ISOLATE)" [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006278 "RNA-dependent DNA replication" evidence=TAS]
[GO:0010008 "endosome membrane" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0019061 "uncoating of virus"
evidence=TAS] [GO:0030260 "entry into host cell" evidence=TAS]
[GO:0046788 "egress of virus within host cell" evidence=TAS]
InterPro:IPR000071 InterPro:IPR000721 InterPro:IPR001878
InterPro:IPR008916 InterPro:IPR008919 InterPro:IPR010999
InterPro:IPR012344 Pfam:PF00098 Pfam:PF00540 Pfam:PF00607
PRINTS:PR00234 PROSITE:PS50158 SMART:SM00343 GO:GO:0005829
Reactome:REACT_116125 GO:GO:0005654 GO:GO:0030430 GO:GO:0046872
GO:GO:0005198 GO:GO:0008270 GO:GO:0003723 GO:GO:0010008
GO:GO:0020002 GO:GO:0006278 Gene3D:4.10.60.10 SUPFAM:SSF57756
GO:GO:0030260 GO:GO:0042025 GO:GO:0019028 EMBL:M17451 GO:GO:0019076
Gene3D:1.10.1200.30 Gene3D:1.10.150.90 Gene3D:1.10.375.10
SUPFAM:SSF47353 SUPFAM:SSF47943 SUPFAM:SSF47836 GO:GO:0046788
GO:GO:0019061 InterPro:IPR014817 Pfam:PF08705
ProteinModelPortal:P05890 SMR:P05890 Uniprot:P05890
Length = 501
Score = 114 (45.2 bits), Expect = 0.00039, P = 0.00039
Identities = 21/51 (41%), Positives = 27/51 (52%)
Query: 58 GHFARECPNVAVCNNCGLPGHIASECTTQAR--CWNCREPGHMASNCHNEG 106
G+F R+ + C NCG GHIA C + CW C + GH +C NEG
Sbjct: 381 GNF-RDQRKIVKCFNCGKVGHIAKNCRAPRKKGCWKCGKEGHQMKDCTNEG 430
>UNIPROTKB|A0JM12 [details] [associations]
symbol:megf10 "Multiple epidermal growth factor-like
domains protein 10" species:8364 "Xenopus (Silurana) tropicalis"
[GO:0014719 "satellite cell activation" evidence=ISS] [GO:0014816
"satellite cell differentiation" evidence=ISS] [GO:0014841
"satellite cell proliferation" evidence=ISS] InterPro:IPR000742
InterPro:IPR011489 PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181
GO:GO:0016021 GO:GO:0005886 GO:GO:0007155 GO:GO:0006909
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0030239 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 GO:GO:0014816
Pfam:PF12661 GeneTree:ENSGT00690000101691 CTD:84466
HOVERGEN:HBG108333 OMA:FGCNLTC GO:GO:0014719 GO:GO:0014841
EMBL:BC125696 RefSeq:NP_001072726.1 UniGene:Str.46279
ProteinModelPortal:A0JM12 Ensembl:ENSXETT00000034579 GeneID:780183
KEGG:xtr:780183 Xenbase:XB-GENE-491974 Bgee:A0JM12 Uniprot:A0JM12
Length = 1114
Score = 119 (46.9 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 36/129 (27%), Positives = 45/129 (34%)
Query: 48 GNLCNNCKRPGHFARECPNVAVCNNCGLPGHIASECTTQARCWN---CREP---GHMASN 101
G C + PG +C C N G+ H+ EC+ A W C +P G N
Sbjct: 217 GAFCEDLCPPGKHGSQCEERCPCQNGGVCHHVTGECSCPAG-WMGTVCGQPCPEGRYGRN 275
Query: 102 CHNEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCRKTGH 161
C E CH+ G C G+ R C G C C N K H
Sbjct: 276 CSQECQCHNGGTCDSATGQCYCSPGYNGE-RCQEEC-PVGLYGVKCAQTCQCLNGGKCYH 333
Query: 162 IARDCQNEP 170
I+ C EP
Sbjct: 334 ISGACLCEP 342
Score = 39 (18.8 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 8/31 (25%), Positives = 13/31 (41%)
Query: 219 GYHDVICRSCNQMGHMSRDCVGPLIICRNCG 249
G+ +C G ++C G + C N G
Sbjct: 649 GFMGSLCNEVCPSGRYGKNCAG-VCACTNNG 678
>ASPGD|ASPL0000046912 [details] [associations]
symbol:AN1944 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001878 PROSITE:PS50158 SMART:SM00343 EMBL:BN001307
GO:GO:0008270 GO:GO:0003676 EMBL:AACD01000029 eggNOG:COG5082
Gene3D:4.10.60.10 SUPFAM:SSF57756 KO:K12597 RefSeq:XP_659548.1
EnsemblFungi:CADANIAT00008604 GeneID:2875623 KEGG:ani:AN1944.2
HOGENOM:HOG000192719 OMA:SASEIPC OrthoDB:EOG498Z8B Uniprot:Q5BBY6
Length = 690
Score = 115 (45.5 bits), Expect = 0.00046, P = 0.00046
Identities = 36/123 (29%), Positives = 49/123 (39%)
Query: 70 CNNCGLPGHIASECTTQARCWNCREPG-HMASNCHNEGICHSCGKTGHRARDCSTHVQSG 128
C C GH+A C T+ C +C H +S C C C GH A+DC + ++S
Sbjct: 362 CMECLQEGHLAEVCPTR-ECVHCGAWNKHQSSLCPKFRRCQRCRGRGHDAKDCPSALKSS 420
Query: 129 GDLRLCNNCYKPGHIAADCTNDKACKNCRKTGHIARDCQNEPV-----CNLCNIAGHVAR 183
C+ C H+ DC D K R+ D + PV C C H+
Sbjct: 421 ASEIPCDLCGSADHLEYDC--DYLWKLPRQ------DTTSLPVLVSISCAHCTSNRHLIG 472
Query: 184 QCP 186
CP
Sbjct: 473 DCP 475
Score = 114 (45.2 bits), Expect = 0.00060, P = 0.00060
Identities = 35/114 (30%), Positives = 43/114 (37%)
Query: 51 CNNCKRPGHFARECPNVAVCNNCGLPG-HIASECTTQARCWNCREPGHMASNCHN----- 104
C C + GH A CP C +CG H +S C RC CR GH A +C +
Sbjct: 362 CMECLQEGHLAEVCPT-RECVHCGAWNKHQSSLCPKFRRCQRCRGRGHDAKDCPSALKSS 420
Query: 105 --EGICHSCGKTGHRARDCS----THVQSGGDLRL-----CNNCYKPGHIAADC 147
E C CG H DC Q L + C +C H+ DC
Sbjct: 421 ASEIPCDLCGSADHLEYDCDYLWKLPRQDTTSLPVLVSISCAHCTSNRHLIGDC 474
>UNIPROTKB|P35962 [details] [associations]
symbol:gag "Gag polyprotein" species:362651 "Human
immunodeficiency virus type 1 (isolate YU2)" [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006278 "RNA-dependent DNA replication" evidence=TAS]
[GO:0010008 "endosome membrane" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0019061 "uncoating of virus"
evidence=TAS] [GO:0030260 "entry into host cell" evidence=TAS]
[GO:0046788 "egress of virus within host cell" evidence=TAS]
InterPro:IPR000071 InterPro:IPR000721 InterPro:IPR001878
InterPro:IPR008916 InterPro:IPR008919 InterPro:IPR010999
InterPro:IPR012344 Pfam:PF00098 Pfam:PF00540 Pfam:PF00607
PRINTS:PR00234 PROSITE:PS50158 SMART:SM00343 GO:GO:0005829
Reactome:REACT_116125 GO:GO:0005654 GO:GO:0030430 GO:GO:0046872
GO:GO:0005198 GO:GO:0008270 GO:GO:0003723 GO:GO:0010008
GO:GO:0020002 GO:GO:0006278 Gene3D:4.10.60.10 SUPFAM:SSF57756
GO:GO:0030260 GO:GO:0042025 GO:GO:0019028 EMBL:M93258 GO:GO:0019076
Gene3D:1.10.1200.30 Gene3D:1.10.150.90 Gene3D:1.10.375.10
SUPFAM:SSF47353 SUPFAM:SSF47943 SUPFAM:SSF47836 GO:GO:0046788
GO:GO:0019061 InterPro:IPR014817 Pfam:PF08705 PIR:A44001 PDB:1F6U
PDB:1MFS PDB:2R05 PDBsum:1F6U PDBsum:1MFS PDBsum:2R05
ProteinModelPortal:P35962 SMR:P35962 EvolutionaryTrace:P35962
Uniprot:P35962
Length = 500
Score = 113 (44.8 bits), Expect = 0.00050, P = 0.00050
Identities = 27/80 (33%), Positives = 40/80 (50%)
Query: 51 CNNCKRPGHFARECPNVA--VCNNCGLP---GHIASECTTQARCWNCREPGHMASNCH-- 103
C PGH AR V N+ + G+ ++ T +C+NC + GH+A NC
Sbjct: 350 CQGVGGPGHKARVLAEAMSQVTNSATIMMQRGNFRNQRKT-VKCFNCGKEGHIAKNCRAP 408
Query: 104 -NEGICHSCGKTGHRARDCS 122
+G C CGK GH+ +DC+
Sbjct: 409 RKKG-CWKCGKEGHQMKDCT 427
>TAIR|locus:2149234 [details] [associations]
symbol:AT5G20220 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0031072 "heat shock protein binding"
evidence=IEA] [GO:0051082 "unfolded protein binding" evidence=IEA]
InterPro:IPR001878 PROSITE:PS50158 SMART:SM00343 EMBL:CP002688
GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
IPI:IPI00540792 RefSeq:NP_001078608.1 RefSeq:NP_568393.1
UniGene:At.31217 ProteinModelPortal:F4K466 SMR:F4K466
EnsemblPlants:AT5G20220.1 EnsemblPlants:AT5G20220.2 GeneID:832144
KEGG:ath:AT5G20220 OMA:SIDERPW Uniprot:F4K466
Length = 393
Score = 111 (44.1 bits), Expect = 0.00060, P = 0.00060
Identities = 42/147 (28%), Positives = 58/147 (39%)
Query: 36 PLRRETRRSFSQGN--LCNNCKRPGHFARECPNVAV-------CNNCGLPGHIASECTTQ 86
P+ RE R +G C NC + GH CP + C CG GH C
Sbjct: 249 PVNREQRSLSMKGTKFYCKNCGQEGHRRHYCPELGTNADRKFRCRGCGGKGHNRRTCPKS 308
Query: 87 ARCWNCREPGHMASNCHNEGICHSCGKTGHRARDCSTHVQSGGDLRLCN--NCYKPGHIA 144
+ G +++ H GIC G+ GH +R C + G C+ N + G
Sbjct: 309 K---SIVTKG-ISTRYHKCGIC---GERGHNSRTCR---KPTGVNPSCSGENSGEDG--V 356
Query: 145 ADCTNDKACKNCRKTGHIARDCQNEPV 171
T AC C+K GH R C ++ V
Sbjct: 357 GKITY--ACGFCKKMGHNVRTCPSKQV 381
>UNIPROTKB|F1RKL7 [details] [associations]
symbol:MEGF10 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0055001 "muscle cell development" evidence=IEA]
[GO:0051147 "regulation of muscle cell differentiation"
evidence=IEA] [GO:0048641 "regulation of skeletal muscle tissue
development" evidence=IEA] [GO:0043654 "recognition of apoptotic
cell" evidence=IEA] [GO:0034109 "homotypic cell-cell adhesion"
evidence=IEA] [GO:0014841 "satellite cell proliferation"
evidence=IEA] [GO:0014816 "satellite cell differentiation"
evidence=IEA] [GO:0014719 "satellite cell activation" evidence=IEA]
[GO:0001891 "phagocytic cup" evidence=IEA] InterPro:IPR000742
InterPro:IPR011489 Pfam:PF07546 PROSITE:PS50026 PROSITE:PS51041
SMART:SM00181 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0001891
GO:GO:0048641 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
GO:GO:0055001 GO:GO:0034109 GO:GO:0014816 Pfam:PF12661
GeneTree:ENSGT00690000101691 GO:GO:0043654 GO:GO:0051147
GO:GO:0014719 GO:GO:0014841 EMBL:AEMK01186990 EMBL:CU582932
EMBL:CU914445 Ensembl:ENSSSCT00000015571 OMA:EDCAKEC
ArrayExpress:F1RKL7 Uniprot:F1RKL7
Length = 305
Score = 109 (43.4 bits), Expect = 0.00066, P = 0.00066
Identities = 35/146 (23%), Positives = 50/146 (34%)
Query: 48 GNLCNNCKRPGHFARECPNVAVCNNCGLPGHIASECTTQA--RCWNCRE---PGHMASNC 102
G C++ H+ C + C N L I C A R W C E G ++C
Sbjct: 132 GTNCSSACDGDHWGPHCSSRCQCKNRALCNPITGACHCAAGFRGWRCEERCEQGTYGNDC 191
Query: 103 HNEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCRKTGHI 162
H C + H +C G C + PG C C+N H+
Sbjct: 192 HQRCQCQNGATCDHVTGEC--RCPPGYTGAFCEDLCPPGKHGPQCEQRCPCQNGGVCHHV 249
Query: 163 ARDCQNEPVCNLCNIAGHVARQCPKG 188
+C P L + G + CP+G
Sbjct: 250 TGECPCPPGW-LGTVCG---QPCPEG 271
>UNIPROTKB|G4MX71 [details] [associations]
symbol:MGG_15803 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0043581 "mycelium development" evidence=IEP] InterPro:IPR001878
SMART:SM00343 GO:GO:0008270 GO:GO:0003676 GO:GO:0043581
EMBL:CM001232 RefSeq:XP_003714976.1 EnsemblFungi:MGG_15803T0
GeneID:12985501 KEGG:mgr:MGG_15803 Uniprot:G4MX71
Length = 893
Score = 117 (46.2 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 42/152 (27%), Positives = 58/152 (38%)
Query: 50 LCNNCKRPGHFARECPNVAVCNNCGLPGHIASECTTQARCWNC--REPGHMASNCHNEGI 107
+C+NC H C V C +CG G + + + +P + S H+
Sbjct: 565 ICSNCTGKDHLESSC--VLRCGHCGALGDDVNPLDRERPNFQIVRSQPPALPSRYHHAHD 622
Query: 108 CH-------SCGK--TGHRARDCSTHVQSGGDLRLCNNCYKPGHI----AADCTNDKACK 154
C C T H A+DC+ R C N + PGH A CTN C
Sbjct: 623 CEVPKRNRCKCVSFPTFHTAKDCTVTCS-----RPCGNPWPPGHFKHRNAMTCTN--RCC 675
Query: 155 NCRKTGHIARDCQ-NEPVCNLCNIAGHVARQC 185
C GH +DC + C LC A H+ + C
Sbjct: 676 MCGIRGHAGKDCHLTKDSC-LCG-AHHLGQDC 705
Score = 37 (18.1 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 7/13 (53%), Positives = 8/13 (61%)
Query: 38 RRETRRSFSQGNL 50
RR RRS GN+
Sbjct: 420 RRSRRRSLDHGNI 432
>UNIPROTKB|E2RIR0 [details] [associations]
symbol:ZCCHC7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
GO:GO:0005737 GO:GO:0005730 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
GeneTree:ENSGT00510000048226 OMA:EAQIANN EMBL:AAEX03007966
Ensembl:ENSCAFT00000003709 Uniprot:E2RIR0
Length = 418
Score = 110 (43.8 bits), Expect = 0.00086, P = 0.00086
Identities = 41/149 (27%), Positives = 52/149 (34%)
Query: 39 RETRRSFSQG-NL-CNNCKRPGHFARECP---NVAVCNNCGLPGHIASECTTQARCWNCR 93
R T R +S N+ C NC + GH ++ CP V C C GH+ C + C C
Sbjct: 229 RWTHRYYSANKNVTCRNCDKCGHLSKNCPLPQKVRPCCLCSERGHLQYACPARF-CLGCS 287
Query: 94 EPGHMASNCHNEGI----CHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCT- 148
P C C C GH A C + L KPG T
Sbjct: 288 LPMSSTHRCLERSSWRKRCDRCDMIGHYADACP---EIWRQYHLTT---KPGPPKKPKTP 341
Query: 149 -NDKA---CKNCRKTGHIARDCQNEPVCN 173
A C NC + GH +C + N
Sbjct: 342 SGQSALVYCYNCGQEGHYGHECTERRMFN 370
>UNIPROTKB|P12493 [details] [associations]
symbol:gag "Gag polyprotein" species:11698 "Human
immunodeficiency virus type 1 (NEW YORK-5 ISOLATE)" [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006278 "RNA-dependent DNA replication" evidence=TAS]
[GO:0010008 "endosome membrane" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0019061 "uncoating of virus"
evidence=TAS] [GO:0019221 "cytokine-mediated signaling pathway"
evidence=TAS] [GO:0030260 "entry into host cell" evidence=TAS]
[GO:0046788 "egress of virus within host cell" evidence=TAS]
InterPro:IPR000071 InterPro:IPR000721 InterPro:IPR001878
InterPro:IPR008916 InterPro:IPR008919 InterPro:IPR010999
InterPro:IPR012344 Pfam:PF00098 Pfam:PF00540 Pfam:PF00607
PRINTS:PR00234 PROSITE:PS50158 SMART:SM00343 GO:GO:0005829
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0005654
GO:GO:0030430 GO:GO:0046872 GO:GO:0005198 GO:GO:0008270
GO:GO:0019221 GO:GO:0003723 GO:GO:0010008 GO:GO:0020002
GO:GO:0006278 Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0030260
GO:GO:0042025 GO:GO:0019028 EMBL:M19921 GO:GO:0019076
Gene3D:1.10.1200.30 Gene3D:1.10.150.90 Gene3D:1.10.375.10
SUPFAM:SSF47353 SUPFAM:SSF47943 SUPFAM:SSF47836 GO:GO:0046788
GO:GO:0019061 InterPro:IPR014817 Pfam:PF08705 PDB:2C55 PDBsum:2C55
DisProt:DP00101 ProteinModelPortal:P12493 SMR:P12493
EvolutionaryTrace:P12493 Uniprot:P12493
Length = 500
Score = 111 (44.1 bits), Expect = 0.00087, P = 0.00087
Identities = 27/80 (33%), Positives = 39/80 (48%)
Query: 51 CNNCKRPGHFARECPNVA--VCNNCGL---PGHIASECTTQARCWNCREPGHMASNCH-- 103
C PGH AR V N + G+ ++ T +C+NC + GH+A NC
Sbjct: 350 CQGVGGPGHKARVLAEAMSQVTNPATIMIQKGNFRNQRKT-VKCFNCGKEGHIAKNCRAP 408
Query: 104 -NEGICHSCGKTGHRARDCS 122
+G C CGK GH+ +DC+
Sbjct: 409 RKKG-CWKCGKEGHQMKDCT 427
>UNIPROTKB|Q72497 [details] [associations]
symbol:gag "Gag polyprotein" species:11676 "Human
immunodeficiency virus 1" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000071 InterPro:IPR000721
InterPro:IPR001878 InterPro:IPR008916 InterPro:IPR008919
InterPro:IPR010999 InterPro:IPR012344 Pfam:PF00098 Pfam:PF00540
Pfam:PF00607 PRINTS:PR00234 PROSITE:PS50158 SMART:SM00343
GO:GO:0030430 GO:GO:0046872 GO:GO:0005198 GO:GO:0008270
GO:GO:0003723 Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0042025
GO:GO:0019028 GO:GO:0019076 Gene3D:1.10.1200.30 Gene3D:1.10.150.90
Gene3D:1.10.375.10 SUPFAM:SSF47353 SUPFAM:SSF47943 SUPFAM:SSF47836
InterPro:IPR014817 Pfam:PF08705 PDB:1M9D PDBsum:1M9D PDB:1M9C
PDB:1M9E PDB:1M9F PDB:1M9X PDB:1M9Y PDBsum:1M9C PDBsum:1M9E
PDBsum:1M9F PDBsum:1M9X PDBsum:1M9Y PDB:3OBU PDB:3OBX PDBsum:3OBU
PDBsum:3OBX EMBL:U26942 PDB:1L6N PDB:2BUO PDB:2JMG PDB:2NV3
PDBsum:1L6N PDBsum:2BUO PDBsum:2JMG PDBsum:2NV3
ProteinModelPortal:Q72497 SMR:Q72497 DIP:DIP-36777N IntAct:Q72497
EvolutionaryTrace:Q72497 Uniprot:Q72497
Length = 500
Score = 111 (44.1 bits), Expect = 0.00087, P = 0.00087
Identities = 27/80 (33%), Positives = 39/80 (48%)
Query: 51 CNNCKRPGHFARECPNVA--VCNNCGL---PGHIASECTTQARCWNCREPGHMASNCH-- 103
C PGH AR V N + G+ ++ T +C+NC + GH+A NC
Sbjct: 350 CQGVGGPGHKARVLAEAMSQVTNPATIMIQKGNFRNQRKT-VKCFNCGKEGHIAKNCRAP 408
Query: 104 -NEGICHSCGKTGHRARDCS 122
+G C CGK GH+ +DC+
Sbjct: 409 RKKG-CWKCGKEGHQMKDCT 427
>MGI|MGI:99914 [details] [associations]
symbol:Lamc1 "laminin, gamma 1" species:10090 "Mus musculus"
[GO:0005201 "extracellular matrix structural constituent"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=ISO] [GO:0005604
"basement membrane" evidence=ISO;IDA] [GO:0005605 "basal lamina"
evidence=IDA] [GO:0005606 "laminin-1 complex" evidence=ISO]
[GO:0006461 "protein complex assembly" evidence=ISO] [GO:0007155
"cell adhesion" evidence=ISO] [GO:0016477 "cell migration"
evidence=ISO] [GO:0022617 "extracellular matrix disassembly"
evidence=ISO] [GO:0031012 "extracellular matrix" evidence=ISO]
[GO:0031175 "neuron projection development" evidence=IDA]
[GO:0031581 "hemidesmosome assembly" evidence=ISO] [GO:0034446
"substrate adhesion-dependent cell spreading" evidence=ISO]
[GO:0043208 "glycosphingolipid binding" evidence=IDA] [GO:0043259
"laminin-10 complex" evidence=IPI] [GO:0070062 "extracellular
vesicular exosome" evidence=ISO] MGI:MGI:99914 GO:GO:0016477
GO:GO:0006461 GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022
Reactome:REACT_127416 PROSITE:PS01186 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0031175 GO:GO:0031581 GO:GO:0022617 GO:GO:0005201
GO:GO:0043208 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 eggNOG:NOG235720
HOGENOM:HOG000019301 GO:GO:0043259 HOVERGEN:HBG100808
OrthoDB:EOG49GKFS EMBL:X05211 EMBL:J03484 EMBL:J02930 EMBL:J03749
IPI:IPI00400016 PIR:A28469 PIR:S55783 UniGene:Mm.1249 PDB:1KLO
PDB:1NPE PDB:1TLE PDB:4AQT PDBsum:1KLO PDBsum:1NPE PDBsum:1TLE
PDBsum:4AQT ProteinModelPortal:P02468 SMR:P02468 MINT:MINT-1031545
STRING:P02468 PhosphoSite:P02468 PaxDb:P02468 PRIDE:P02468
UCSC:uc007czu.1 InParanoid:P02468 EvolutionaryTrace:P02468
CleanEx:MM_LAMC1 Genevestigator:P02468
GermOnline:ENSMUSG00000026478 Uniprot:P02468
Length = 1607
Score = 112 (44.5 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 45/163 (27%), Positives = 62/163 (38%)
Query: 32 YCDPPLRRETRRSFSQGNLCNNCK--RPGHFARECP-------NVAVCN--NCGLPGHIA 80
Y DP L R T G C NC+ G C N C+ +C G ++
Sbjct: 350 YFDPELYRST----GHGGHCTNCRDNTDGAKCERCRENFFRLGNTEACSPCHCSPVGSLS 405
Query: 81 SECTTQARCWNCREPGHMASNCHN--EGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCY 138
++C + RC +C+ PG M C G HS + G R CS ++ D CN
Sbjct: 406 TQCDSYGRC-SCK-PGVMGDKCDRCQPGF-HSLTEAG--CRPCSCDLRGSTDE--CN--V 456
Query: 139 KPGH-IAADCTNDKACKNCRKTGHIARDCQNEPVCNLCNIAGH 180
+ G + D C+ C K G + N C C GH
Sbjct: 457 ETGRCVCKDNVEGFNCERC-KPGFFNLESSNPKGCTPCFCFGH 498
Score = 47 (21.6 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 13/48 (27%), Positives = 16/48 (33%)
Query: 218 VGYHDVICRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYECPSGRIAD 265
VGY C +C +GP C C GH P + D
Sbjct: 692 VGYGGQFCETCLPGYRRETPSLGPYSPCVLCTCNGHSETCDPETGVCD 739
>UNIPROTKB|F1MAA7 [details] [associations]
symbol:Lamc1 "Protein Lamc1" species:10116 "Rattus
norvegicus" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
[GO:0022617 "extracellular matrix disassembly" evidence=IEA]
[GO:0031175 "neuron projection development" evidence=IEA]
[GO:0031581 "hemidesmosome assembly" evidence=IEA] [GO:0034446
"substrate adhesion-dependent cell spreading" evidence=IEA]
[GO:0043208 "glycosphingolipid binding" evidence=IEA] [GO:0043259
"laminin-10 complex" evidence=IEA] RGD:621052 GO:GO:0016477
GO:GO:0006461 InterPro:IPR013032 PROSITE:PS00022 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0034446 GO:GO:0031175 GO:GO:0031581 GO:GO:0022617
GO:GO:0005201 GO:GO:0043208 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GeneTree:ENSGT00690000102103 GO:GO:0043259 CTD:3915 KO:K05635
OMA:EATDYPW IPI:IPI00363849 RefSeq:NP_446418.1 UniGene:Rn.7145
ProteinModelPortal:F1MAA7 Ensembl:ENSRNOT00000003605 GeneID:117036
KEGG:rno:117036 NextBio:619829 Uniprot:F1MAA7
Length = 1607
Score = 112 (44.5 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 45/163 (27%), Positives = 61/163 (37%)
Query: 32 YCDPPLRRETRRSFSQGNLCNNCK--RPGHFARECP-------NVAVCN--NCGLPGHIA 80
Y DP L R T G C NC+ G C N C+ +C G ++
Sbjct: 350 YFDPELYRST----GHGGHCTNCRDNTDGAKCERCRENFFRLGNTEACSPCHCSPVGSLS 405
Query: 81 SECTTQARCWNCREPGHMASNCHN--EGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCY 138
++C + RC +C+ PG M C G HS + G R CS G CN
Sbjct: 406 TQCDSYGRC-SCK-PGVMGDKCDRCQPGF-HSLTEAG--CRPCSC--DPSGSTDECN--V 456
Query: 139 KPGH-IAADCTNDKACKNCRKTGHIARDCQNEPVCNLCNIAGH 180
+ G + D +C+ C K G + N C C GH
Sbjct: 457 ETGRCVCKDNVEGFSCERC-KPGFFNLESSNPKGCTPCFCFGH 498
Score = 47 (21.6 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 13/48 (27%), Positives = 16/48 (33%)
Query: 218 VGYHDVICRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYECPSGRIAD 265
VGY C +C +GP C C GH P + D
Sbjct: 692 VGYGGQFCETCLPGYRRETPSLGPYSPCVLCTCNGHSETCDPETGVCD 739
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.325 0.139 0.503 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 271 216 0.00088 112 3 12 22 0.46 32
32 0.50 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 96
No. of states in DFA: 565 (60 KB)
Total size of DFA: 162 KB (2093 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 16.72u 0.10s 16.82t Elapsed: 00:00:00
Total cpu time: 16.74u 0.10s 16.84t Elapsed: 00:00:01
Start: Thu May 9 18:11:05 2013 End: Thu May 9 18:11:06 2013