Query 024212
Match_columns 271
No_of_seqs 94 out of 102
Neff 3.6
Searched_HMMs 29240
Date Mon Mar 25 04:19:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024212.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024212hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gkn_A Bacterioferritin comigr 71.8 12 0.0004 28.6 6.7 56 178-234 20-78 (163)
2 3ixr_A Bacterioferritin comigr 70.7 4.6 0.00016 32.3 4.3 59 175-234 33-94 (179)
3 3drn_A Peroxiredoxin, bacterio 62.4 31 0.0011 26.5 7.5 62 173-234 8-72 (161)
4 2lrt_A Uncharacterized protein 60.6 37 0.0013 25.8 7.6 64 173-236 15-79 (152)
5 3gl3_A Putative thiol:disulfid 58.6 52 0.0018 24.2 7.9 64 172-236 8-72 (152)
6 3eur_A Uncharacterized protein 58.1 43 0.0015 24.7 7.4 65 172-236 10-78 (142)
7 3ztl_A Thioredoxin peroxidase; 54.3 20 0.00067 29.8 5.4 69 165-234 38-112 (222)
8 3or5_A Thiol:disulfide interch 53.2 64 0.0022 24.0 7.7 64 172-235 13-77 (165)
9 3kcm_A Thioredoxin family prot 52.5 66 0.0023 23.7 7.6 65 172-236 7-72 (154)
10 3qpm_A Peroxiredoxin; oxidored 49.8 28 0.00095 29.6 5.7 51 183-234 67-120 (240)
11 2v1m_A Glutathione peroxidase; 48.7 65 0.0022 24.1 7.2 63 173-235 11-74 (169)
12 2gs3_A PHGPX, GPX-4, phospholi 48.4 47 0.0016 26.2 6.6 68 168-235 24-92 (185)
13 3dwv_A Glutathione peroxidase- 48.3 15 0.00052 29.2 3.7 61 175-235 28-89 (187)
14 2p5q_A Glutathione peroxidase 47.6 73 0.0025 23.9 7.3 61 175-235 14-75 (170)
15 3fkf_A Thiol-disulfide oxidore 47.4 27 0.00094 25.4 4.7 70 167-236 5-78 (148)
16 2f9s_A Thiol-disulfide oxidore 47.2 83 0.0029 23.2 8.0 61 175-235 8-69 (151)
17 3hdc_A Thioredoxin family prot 46.7 59 0.002 24.5 6.6 66 170-235 18-84 (158)
18 3lwa_A Secreted thiol-disulfid 46.4 94 0.0032 24.0 7.9 65 171-235 35-108 (183)
19 2rrl_A FLIK, flagellar HOOK-le 46.1 57 0.0019 27.9 7.0 42 194-236 111-153 (169)
20 2lrn_A Thiol:disulfide interch 46.0 69 0.0024 23.8 6.9 61 175-235 11-72 (152)
21 2obi_A PHGPX, GPX-4, phospholi 45.7 81 0.0028 24.6 7.5 64 172-235 26-90 (183)
22 4g2e_A Peroxiredoxin; redox pr 44.4 19 0.00064 28.1 3.5 54 181-234 18-73 (157)
23 4hde_A SCO1/SENC family lipopr 43.9 44 0.0015 26.4 5.7 55 181-235 20-78 (170)
24 2vup_A Glutathione peroxidase- 43.4 48 0.0016 26.3 5.9 65 171-235 26-91 (190)
25 2l5o_A Putative thioredoxin; s 43.0 97 0.0033 22.7 7.4 62 173-234 8-70 (153)
26 1xzo_A BSSCO, hypothetical pro 41.6 43 0.0015 25.4 5.1 61 175-235 15-79 (174)
27 1xvw_A Hypothetical protein RV 40.9 50 0.0017 24.8 5.4 63 172-234 14-79 (160)
28 3raz_A Thioredoxin-related pro 40.2 54 0.0019 24.4 5.5 54 181-234 12-66 (151)
29 3kij_A Probable glutathione pe 40.2 88 0.003 24.4 6.9 60 176-235 21-81 (180)
30 1n8j_A AHPC, alkyl hydroperoxi 39.8 60 0.002 25.9 6.0 52 182-234 17-73 (186)
31 3cmi_A Peroxiredoxin HYR1; thi 39.3 53 0.0018 25.3 5.4 53 181-234 20-73 (171)
32 2p31_A CL683, glutathione pero 39.2 1.1E+02 0.0036 24.0 7.3 66 170-235 26-92 (181)
33 1xcc_A 1-Cys peroxiredoxin; un 38.6 57 0.0019 27.3 5.9 52 182-234 20-74 (220)
34 2c0d_A Thioredoxin peroxidase 38.6 62 0.0021 27.1 6.1 70 164-234 22-99 (221)
35 3hcz_A Possible thiol-disulfid 38.2 36 0.0012 24.7 4.1 64 172-235 10-74 (148)
36 3ewl_A Uncharacterized conserv 38.0 1.1E+02 0.0039 22.1 7.5 61 175-235 9-73 (142)
37 3sbc_A Peroxiredoxin TSA1; alp 37.8 44 0.0015 29.0 5.2 52 183-235 42-96 (216)
38 2pn8_A Peroxiredoxin-4; thiore 37.8 57 0.002 26.8 5.7 52 182-234 37-91 (211)
39 4fo5_A Thioredoxin-like protei 37.1 31 0.0011 25.6 3.6 64 172-236 12-76 (143)
40 1jfu_A Thiol:disulfide interch 36.8 1.4E+02 0.0049 22.9 7.7 63 174-236 41-104 (186)
41 3tjj_A Peroxiredoxin-4; thiore 36.5 26 0.00088 30.4 3.5 52 182-234 80-134 (254)
42 3me7_A Putative uncharacterize 36.4 1.2E+02 0.004 23.7 7.1 61 175-235 10-74 (170)
43 1qmv_A Human thioredoxin perox 35.8 80 0.0027 25.1 6.1 51 184-235 25-78 (197)
44 2jsy_A Probable thiol peroxida 35.7 97 0.0033 23.5 6.4 60 174-235 25-86 (167)
45 3fw2_A Thiol-disulfide oxidore 34.4 73 0.0025 23.7 5.3 67 169-235 7-79 (150)
46 2b7k_A SCO1 protein; metalloch 34.2 1.6E+02 0.0055 23.5 7.7 62 174-235 22-88 (200)
47 3sr0_A Adenylate kinase; phosp 33.8 10 0.00036 31.9 0.5 12 9-20 4-15 (206)
48 2a4v_A Peroxiredoxin DOT5; yea 33.8 97 0.0033 23.4 6.1 58 176-234 16-77 (159)
49 2i81_A 2-Cys peroxiredoxin; st 33.6 88 0.003 25.7 6.2 52 182-234 38-95 (213)
50 3eyt_A Uncharacterized protein 33.4 1.4E+02 0.0049 22.0 7.7 54 181-234 16-71 (158)
51 1uul_A Tryparedoxin peroxidase 33.3 92 0.0031 24.9 6.1 50 184-234 27-79 (202)
52 2r37_A Glutathione peroxidase 33.2 67 0.0023 26.6 5.4 56 173-234 17-79 (207)
53 2ggt_A SCO1 protein homolog, m 32.7 1.5E+02 0.0051 21.9 7.3 56 181-236 11-72 (164)
54 2ywi_A Hypothetical conserved 32.0 1.5E+02 0.0052 22.8 7.1 64 173-236 24-90 (196)
55 2amj_A Modulator of drug activ 31.9 1.3E+02 0.0045 24.8 7.0 69 193-267 11-83 (204)
56 2wfc_A Peroxiredoxin 5, PRDX5; 31.9 1.6E+02 0.0054 23.2 7.2 53 181-234 18-76 (167)
57 1tp9_A Peroxiredoxin, PRX D (t 31.6 81 0.0028 24.3 5.4 52 182-234 21-80 (162)
58 2lja_A Putative thiol-disulfid 31.6 51 0.0017 24.3 4.0 62 175-236 12-74 (152)
59 3umf_A Adenylate kinase; rossm 31.3 13 0.00043 32.0 0.6 13 8-20 32-44 (217)
60 1prx_A HORF6; peroxiredoxin, h 31.0 1.1E+02 0.0036 25.7 6.3 59 176-235 14-75 (224)
61 3u5r_E Uncharacterized protein 30.6 73 0.0025 26.0 5.1 67 169-235 34-102 (218)
62 2i3y_A Epididymal secretory gl 30.2 82 0.0028 26.5 5.5 58 173-234 35-97 (215)
63 3lor_A Thiol-disulfide isomera 28.7 1.8E+02 0.006 21.5 7.0 54 181-234 18-73 (160)
64 2rli_A SCO2 protein homolog, m 28.1 1.9E+02 0.0064 21.6 7.4 61 176-236 9-75 (171)
65 3uma_A Hypothetical peroxiredo 27.9 99 0.0034 25.2 5.5 52 182-234 43-101 (184)
66 1zye_A Thioredoxin-dependent p 27.2 78 0.0027 26.1 4.8 53 182-235 45-100 (220)
67 3p7x_A Probable thiol peroxida 26.3 1.2E+02 0.0042 23.1 5.5 54 177-234 30-86 (166)
68 2f8a_A Glutathione peroxidase 25.6 1.3E+02 0.0046 24.5 5.9 61 174-234 27-89 (208)
69 1i5g_A Tryparedoxin II; electr 25.4 2E+02 0.0068 21.0 7.7 60 176-235 11-72 (144)
70 2v2g_A Peroxiredoxin 6; oxidor 25.3 1.7E+02 0.006 24.8 6.8 54 181-235 17-73 (233)
71 2qjy_C Ubiquinol-cytochrome C 23.3 1E+02 0.0035 25.8 4.8 29 95-123 10-38 (187)
72 2h01_A 2-Cys peroxiredoxin; th 23.1 86 0.0029 24.7 4.1 52 182-234 17-74 (192)
73 3zrd_A Thiol peroxidase; oxido 21.9 91 0.0031 25.4 4.1 56 177-234 62-119 (200)
74 2yzh_A Probable thiol peroxida 20.9 1.3E+02 0.0043 23.1 4.6 57 176-234 30-88 (171)
75 1psq_A Probable thiol peroxida 20.7 1.8E+02 0.0061 22.1 5.4 56 176-234 25-83 (163)
76 3tue_A Tryparedoxin peroxidase 20.5 96 0.0033 26.9 4.2 53 182-235 45-100 (219)
77 3s9f_A Tryparedoxin; thioredox 20.4 2.9E+02 0.01 21.1 7.0 59 177-236 33-93 (165)
78 1we0_A Alkyl hydroperoxide red 20.1 1.8E+02 0.006 22.6 5.4 51 185-235 23-75 (187)
No 1
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=71.77 E-value=12 Score=28.58 Aligned_cols=56 Identities=14% Similarity=0.101 Sum_probs=43.2
Q ss_pred eEecCCceeehhhhcCcceEEEEeCC---HhHHHHHHhhchhhHHHHhhcCcEEEEEeeC
Q 024212 178 LRVDEKKIISVNNLRGIARLVICSGP---ASYIMESFKRSEPFTESLLERGVLVVSFTTD 234 (271)
Q Consensus 178 Vrl~~~r~v~L~~LRg~aRvVIvAG~---~e~V~~al~~Ae~~~~~L~~rgVLVVPV~~d 234 (271)
+.-.+|+.+++.+++|.. +||.-.+ -..+...+..-+.+.+++.++|+-||-|..|
T Consensus 20 l~~~~G~~~~l~~~~gk~-~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d 78 (163)
T 3gkn_A 20 LSLSGGTQTTLRAHAGHW-LVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRD 78 (163)
T ss_dssp EECSTTCEECSGGGTTSC-EEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred ccCCCCCEEEHHHhCCCc-EEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 444568999999999974 3333332 4567777888888889999999999999886
No 2
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=70.72 E-value=4.6 Score=32.27 Aligned_cols=59 Identities=12% Similarity=0.049 Sum_probs=44.4
Q ss_pred cceeEecCCceeehhhhcCcceEEEEeCC---HhHHHHHHhhchhhHHHHhhcCcEEEEEeeC
Q 024212 175 NLKLRVDEKKIISVNNLRGIARLVICSGP---ASYIMESFKRSEPFTESLLERGVLVVSFTTD 234 (271)
Q Consensus 175 rL~Vrl~~~r~v~L~~LRg~aRvVIvAG~---~e~V~~al~~Ae~~~~~L~~rgVLVVPV~~d 234 (271)
.+.+.-.+|+.++|++|+|. -+||.-.+ -..+...+..-+.+.+++.+.|+-||-|..|
T Consensus 33 ~f~l~~~~G~~v~l~d~~Gk-~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~~~vv~Vs~D 94 (179)
T 3ixr_A 33 NHPLMLSGSTCKTLSDYTNQ-WLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVSRD 94 (179)
T ss_dssp HCCEEEGGGEEECGGGGTTS-EEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEESC
T ss_pred CeeEECCCCCEEeHHHHCCC-CEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEcCC
Confidence 33444456899999999997 45555443 4567777888888889999999999999875
No 3
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=62.37 E-value=31 Score=26.47 Aligned_cols=62 Identities=15% Similarity=0.089 Sum_probs=45.0
Q ss_pred cccceeEecCCceeehhhhcCcceEEEEeC---CHhHHHHHHhhchhhHHHHhhcCcEEEEEeeC
Q 024212 173 LSNLKLRVDEKKIISVNNLRGIARLVICSG---PASYIMESFKRSEPFTESLLERGVLVVSFTTD 234 (271)
Q Consensus 173 L~rL~Vrl~~~r~v~L~~LRg~aRvVIvAG---~~e~V~~al~~Ae~~~~~L~~rgVLVVPV~~d 234 (271)
+-.+.+.-.+|+.+++.+++|..-+||.-. .-..+...+..-+.+.+++.+.||.||-|..|
T Consensus 8 ~P~f~l~~~~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d 72 (161)
T 3drn_A 8 APLFEGIADNGEKISLSDYIGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVSSD 72 (161)
T ss_dssp CCCCEEEETTSCEEEGGGTTTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEESC
T ss_pred CCCeEeecCCCCEEEHHHhcCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEeCC
Confidence 334455556789999999999874454443 23456667777778888999999999999875
No 4
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=60.65 E-value=37 Score=25.81 Aligned_cols=64 Identities=13% Similarity=0.164 Sum_probs=44.2
Q ss_pred cccceeEecCCceeehhhhcCcceEEEEeCC-HhHHHHHHhhchhhHHHHhhcCcEEEEEeeCCC
Q 024212 173 LSNLKLRVDEKKIISVNNLRGIARLVICSGP-ASYIMESFKRSEPFTESLLERGVLVVSFTTDGN 236 (271)
Q Consensus 173 L~rL~Vrl~~~r~v~L~~LRg~aRvVIvAG~-~e~V~~al~~Ae~~~~~L~~rgVLVVPV~~dg~ 236 (271)
+-.+.+.--+|+.++|.+++|..-+|...++ =..+...+..-+.+.+++.+.|+.||-|..|..
T Consensus 15 ~p~f~l~~~~G~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~~ 79 (152)
T 2lrt_A 15 IIDIQLKDLKGNTRSLTDLKGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIYQISLDGD 79 (152)
T ss_dssp SCCCCEEBTTSCEECTTTGGGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSCC
T ss_pred CCCeEEEcCCCCEEeHHHhCCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEEEEEccCC
Confidence 3344444456899999999986544433333 244666666667778888889999999988754
No 5
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=58.64 E-value=52 Score=24.23 Aligned_cols=64 Identities=13% Similarity=0.175 Sum_probs=46.1
Q ss_pred hcccceeEecCCceeehhhhcCcceEEEEeCC-HhHHHHHHhhchhhHHHHhhcCcEEEEEeeCCC
Q 024212 172 SLSNLKLRVDEKKIISVNNLRGIARLVICSGP-ASYIMESFKRSEPFTESLLERGVLVVSFTTDGN 236 (271)
Q Consensus 172 ~L~rL~Vrl~~~r~v~L~~LRg~aRvVIvAG~-~e~V~~al~~Ae~~~~~L~~rgVLVVPV~~dg~ 236 (271)
.+-.+.+.- +++.+++.+++|..-+|...++ =.++...+..-+.+.+.+.+.|+.||.|..|.+
T Consensus 8 ~~P~f~l~~-~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~ 72 (152)
T 3gl3_A 8 KAPDFALPG-KTGVVKLSDKTGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDAK 72 (152)
T ss_dssp BCCCCEEEB-SSSEEEGGGGTTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCSS
T ss_pred cCCceEeeC-CCCeEeHHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCCC
Confidence 344455555 7889999999986544444332 355777777778888899999999999988653
No 6
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=58.14 E-value=43 Score=24.72 Aligned_cols=65 Identities=12% Similarity=0.108 Sum_probs=44.6
Q ss_pred hcccceeEecCCceeehhhhcCcceEEEEeCC-HhHHHHHHhhchh---hHHHHhhcCcEEEEEeeCCC
Q 024212 172 SLSNLKLRVDEKKIISVNNLRGIARLVICSGP-ASYIMESFKRSEP---FTESLLERGVLVVSFTTDGN 236 (271)
Q Consensus 172 ~L~rL~Vrl~~~r~v~L~~LRg~aRvVIvAG~-~e~V~~al~~Ae~---~~~~L~~rgVLVVPV~~dg~ 236 (271)
..-.+.+.-.+|+.++|.+++|..-+|...++ =..+...+..-+. +.+.+.+.+|.||-|..|.+
T Consensus 10 ~ap~f~l~~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~~ 78 (142)
T 3eur_A 10 KALNFTYTLDSGVKGTLYQFPAEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDEE 78 (142)
T ss_dssp BCCCCEEEETTSCEEETTTCCCSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSSC
T ss_pred ccCCcEEEcCCCCEeeHHHcCCCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCCC
Confidence 33445555567899999999994443333332 2456666666666 78888889999999988643
No 7
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=54.32 E-value=20 Score=29.80 Aligned_cols=69 Identities=20% Similarity=0.181 Sum_probs=48.2
Q ss_pred HHHhhhhhcccceeEe--c-CCceeehhhhcCcceEEEEeCC---HhHHHHHHhhchhhHHHHhhcCcEEEEEeeC
Q 024212 165 ARLSREESLSNLKLRV--D-EKKIISVNNLRGIARLVICSGP---ASYIMESFKRSEPFTESLLERGVLVVSFTTD 234 (271)
Q Consensus 165 ari~REe~L~rL~Vrl--~-~~r~v~L~~LRg~aRvVIvAG~---~e~V~~al~~Ae~~~~~L~~rgVLVVPV~~d 234 (271)
..+.-++.+-.+.+.- + +++.++|++++|.. +||.-.. -..+...+..-+.+.+++.+.||-||-|..|
T Consensus 38 ~~l~~G~~aP~f~l~~~~d~~G~~v~l~~~~Gk~-vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv~Is~D 112 (222)
T 3ztl_A 38 MVLLPNRPAPEFKGQAVINGEFKEICLKDYRGKY-VVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTD 112 (222)
T ss_dssp --CCSSEECCCCEEEEEETTEEEEEEGGGGTTSE-EEEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEEEEESS
T ss_pred ccccCCCCCCCeEEecccCCCCcEEeHHHhCCCe-EEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECC
Confidence 4455666666666652 2 35999999999854 3333332 4567777777788888999999999999885
No 8
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=53.19 E-value=64 Score=24.01 Aligned_cols=64 Identities=14% Similarity=0.110 Sum_probs=45.9
Q ss_pred hcccceeEecCCceeehhhhcCcceEEEEeCC-HhHHHHHHhhchhhHHHHhhcCcEEEEEeeCC
Q 024212 172 SLSNLKLRVDEKKIISVNNLRGIARLVICSGP-ASYIMESFKRSEPFTESLLERGVLVVSFTTDG 235 (271)
Q Consensus 172 ~L~rL~Vrl~~~r~v~L~~LRg~aRvVIvAG~-~e~V~~al~~Ae~~~~~L~~rgVLVVPV~~dg 235 (271)
.+-.+.+.--+|+.+++.+++|..-+|...++ =.++.+.+..-+.+.+.+.+.+|.||.|..|.
T Consensus 13 ~~p~~~l~~~~g~~~~l~~~~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~ 77 (165)
T 3or5_A 13 PAPSFSGVTVDGKPFSSASLKGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNE 77 (165)
T ss_dssp BCCCCEEECTTSCEEEGGGGTTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSC
T ss_pred CCCCceeeCCCCCEechhHcCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCC
Confidence 34445555456899999999986555444433 34566667777788888888999999998864
No 9
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=52.46 E-value=66 Score=23.69 Aligned_cols=65 Identities=9% Similarity=0.170 Sum_probs=46.2
Q ss_pred hcccceeEecCCceeehhhhcCcceEEEEeCC-HhHHHHHHhhchhhHHHHhhcCcEEEEEeeCCC
Q 024212 172 SLSNLKLRVDEKKIISVNNLRGIARLVICSGP-ASYIMESFKRSEPFTESLLERGVLVVSFTTDGN 236 (271)
Q Consensus 172 ~L~rL~Vrl~~~r~v~L~~LRg~aRvVIvAG~-~e~V~~al~~Ae~~~~~L~~rgVLVVPV~~dg~ 236 (271)
.+-.+.+.-.+|+.+++.+++|..-+|...++ =.++...+..-+.+.+.+.+.++.||-|..|.+
T Consensus 7 ~~p~~~l~~~~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~ 72 (154)
T 3kcm_A 7 PAPDFTLNTLNGEVVKLSDLKGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEG 72 (154)
T ss_dssp BCCCCEEECTTSCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTT
T ss_pred CCCCeEEEcCCCCEEehhhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCc
Confidence 34445555556899999999886555444433 246666666777788888888999999988754
No 10
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=49.84 E-value=28 Score=29.64 Aligned_cols=51 Identities=18% Similarity=0.099 Sum_probs=38.9
Q ss_pred CceeehhhhcCcceEEEEeCC---HhHHHHHHhhchhhHHHHhhcCcEEEEEeeC
Q 024212 183 KKIISVNNLRGIARLVICSGP---ASYIMESFKRSEPFTESLLERGVLVVSFTTD 234 (271)
Q Consensus 183 ~r~v~L~~LRg~aRvVIvAG~---~e~V~~al~~Ae~~~~~L~~rgVLVVPV~~d 234 (271)
++.++|++++|. -+||.-.+ -..+..-+..-..+.+++.++||-||-|..|
T Consensus 67 G~~vsLsd~~Gk-~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~gv~vv~Is~D 120 (240)
T 3qpm_A 67 FKELKLSDYRGK-YLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAINTEVVACSVD 120 (240)
T ss_dssp EEEEEGGGGTTS-EEEEEECSCTTSSHHHHHHHHHHHHHHHHHTTTEEEEEEESS
T ss_pred CcEEEHHHhCCC-EEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECC
Confidence 679999999995 34444444 3456677777777888999999999999875
No 11
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=48.69 E-value=65 Score=24.13 Aligned_cols=63 Identities=11% Similarity=0.271 Sum_probs=44.0
Q ss_pred cccceeEecCCceeehhhhcCcceEEEEeCC-HhHHHHHHhhchhhHHHHhhcCcEEEEEeeCC
Q 024212 173 LSNLKLRVDEKKIISVNNLRGIARLVICSGP-ASYIMESFKRSEPFTESLLERGVLVVSFTTDG 235 (271)
Q Consensus 173 L~rL~Vrl~~~r~v~L~~LRg~aRvVIvAG~-~e~V~~al~~Ae~~~~~L~~rgVLVVPV~~dg 235 (271)
+-.+.+.--+|+.+++.+++|..-+|....+ =..+...+..-+.+.+++.+.||.||-|..|.
T Consensus 11 ~p~f~l~~~~G~~~~l~~~~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~ 74 (169)
T 2v1m_A 11 IYEFTVKDINGVDVSLEKYRGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGKGLRILAFPCNQ 74 (169)
T ss_dssp GGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCC
T ss_pred cccceeecCCCCCccHHHcCCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcCCeEEEEEECCc
Confidence 4444555456899999999996544433332 23566666666778888888999999999864
No 12
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=48.43 E-value=47 Score=26.16 Aligned_cols=68 Identities=10% Similarity=0.232 Sum_probs=46.7
Q ss_pred hhhhhcccceeEecCCceeehhhhcCcceEEEEeCC-HhHHHHHHhhchhhHHHHhhcCcEEEEEeeCC
Q 024212 168 SREESLSNLKLRVDEKKIISVNNLRGIARLVICSGP-ASYIMESFKRSEPFTESLLERGVLVVSFTTDG 235 (271)
Q Consensus 168 ~REe~L~rL~Vrl~~~r~v~L~~LRg~aRvVIvAG~-~e~V~~al~~Ae~~~~~L~~rgVLVVPV~~dg 235 (271)
.-.+.+-.+.+.--+|+.+++++++|..-+|...++ =..+...+..-+.+.+++.++|+-||.|..|.
T Consensus 24 ~~g~~~p~f~l~~~~G~~v~l~~~~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~is~d~ 92 (185)
T 2gs3_A 24 RCARSMHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQGGKTEVNYTQLVDLHARYAECGLRILAFPCNQ 92 (185)
T ss_dssp GGCCCGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCT
T ss_pred cCCCCcCCceeEcCCCCEeeHHHcCCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcCCeEEEEEECcc
Confidence 334455556665567899999999995443333322 23566666666777888888999999998863
No 13
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=48.35 E-value=15 Score=29.20 Aligned_cols=61 Identities=11% Similarity=0.275 Sum_probs=40.5
Q ss_pred cceeEecCCceeehhhhcCcceEEEEeCC-HhHHHHHHhhchhhHHHHhhcCcEEEEEeeCC
Q 024212 175 NLKLRVDEKKIISVNNLRGIARLVICSGP-ASYIMESFKRSEPFTESLLERGVLVVSFTTDG 235 (271)
Q Consensus 175 rL~Vrl~~~r~v~L~~LRg~aRvVIvAG~-~e~V~~al~~Ae~~~~~L~~rgVLVVPV~~dg 235 (271)
.+.+.--+|+.++|++++|..-+|..-++ =..+...+..-+.+.+++.+.|+.||-|.+|.
T Consensus 28 ~f~l~d~~G~~~~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~ 89 (187)
T 3dwv_A 28 DFEVLDADHKPYNLVQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPSNQ 89 (187)
T ss_dssp GSCCBBTTSCBCCGGGGTTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGGTCEEEEEEBCC
T ss_pred CeEEEcCCCCEeeHHHhCCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhCCeEEEEEECcc
Confidence 33343346899999999996543333222 11255555666677888888999999998863
No 14
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=47.56 E-value=73 Score=23.89 Aligned_cols=61 Identities=8% Similarity=0.289 Sum_probs=42.7
Q ss_pred cceeEecCCceeehhhhcCcceEEEEeCC-HhHHHHHHhhchhhHHHHhhcCcEEEEEeeCC
Q 024212 175 NLKLRVDEKKIISVNNLRGIARLVICSGP-ASYIMESFKRSEPFTESLLERGVLVVSFTTDG 235 (271)
Q Consensus 175 rL~Vrl~~~r~v~L~~LRg~aRvVIvAG~-~e~V~~al~~Ae~~~~~L~~rgVLVVPV~~dg 235 (271)
.+.+.--+|+.+++.+++|..-+|....+ =..+...+..-+.+.+++.+.||.||-|..|.
T Consensus 14 ~f~l~~~~g~~~~l~~~~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~ 75 (170)
T 2p5q_A 14 DFTVKDAKENDVDLSIFKGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQGLEILAFPCNQ 75 (170)
T ss_dssp GCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCT
T ss_pred ceEEEcCCCCEecHHHhCCCEEEEEEEeccCCccHHHHHHHHHHHHHhccCCEEEEEEECCC
Confidence 34444456899999999986544443332 23566666666778888888999999998863
No 15
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=47.44 E-value=27 Score=25.40 Aligned_cols=70 Identities=10% Similarity=0.080 Sum_probs=47.9
Q ss_pred HhhhhhcccceeEecCCceeehh--hhcCcceEEEEeCC-HhHHHHHHhhchhhHHHH-hhcCcEEEEEeeCCC
Q 024212 167 LSREESLSNLKLRVDEKKIISVN--NLRGIARLVICSGP-ASYIMESFKRSEPFTESL-LERGVLVVSFTTDGN 236 (271)
Q Consensus 167 i~REe~L~rL~Vrl~~~r~v~L~--~LRg~aRvVIvAG~-~e~V~~al~~Ae~~~~~L-~~rgVLVVPV~~dg~ 236 (271)
+.-++.+-.+.+.-.+|+.+++. +++|..-+|...++ =.++...+..-+.+.+.+ .+.||.||.|..|..
T Consensus 5 ~~~g~~~p~~~l~~~~g~~~~l~~~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~ 78 (148)
T 3fkf_A 5 VTVGKSAPYFSLPNEKGEKLSRSAERFRNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDID 78 (148)
T ss_dssp CCTTSBCCCCCEEBTTSCEECTTSTTTTTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSC
T ss_pred ccCCCcCCCeEeeCCCCCEEeccccccCCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCC
Confidence 34445556666666678999999 99886544444432 133556666667777788 888999999988653
No 16
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=47.20 E-value=83 Score=23.20 Aligned_cols=61 Identities=18% Similarity=0.221 Sum_probs=42.4
Q ss_pred cceeEecCCceeehhhhcCcceEEEEeCC-HhHHHHHHhhchhhHHHHhhcCcEEEEEeeCC
Q 024212 175 NLKLRVDEKKIISVNNLRGIARLVICSGP-ASYIMESFKRSEPFTESLLERGVLVVSFTTDG 235 (271)
Q Consensus 175 rL~Vrl~~~r~v~L~~LRg~aRvVIvAG~-~e~V~~al~~Ae~~~~~L~~rgVLVVPV~~dg 235 (271)
.+.+.-.+|+.+++.+++|..-+|...++ =.++...+..-+.+.+.+.+.+|.||.|..|.
T Consensus 8 ~~~l~~~~g~~~~l~~~~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~ 69 (151)
T 2f9s_A 8 NFVLEDTNGKRIELSDLKGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGE 69 (151)
T ss_dssp CCEEECTTCCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESC
T ss_pred cceeEcCCCCEEEHHHcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCC
Confidence 33444346899999999886544444433 24566666666777788888899999998864
No 17
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=46.70 E-value=59 Score=24.49 Aligned_cols=66 Identities=17% Similarity=0.201 Sum_probs=47.4
Q ss_pred hhhcccceeEecCCceeehhhhcCcceEEEEeCC-HhHHHHHHhhchhhHHHHhhcCcEEEEEeeCC
Q 024212 170 EESLSNLKLRVDEKKIISVNNLRGIARLVICSGP-ASYIMESFKRSEPFTESLLERGVLVVSFTTDG 235 (271)
Q Consensus 170 Ee~L~rL~Vrl~~~r~v~L~~LRg~aRvVIvAG~-~e~V~~al~~Ae~~~~~L~~rgVLVVPV~~dg 235 (271)
++.+-.+.+.--+|+.+++.+++|..-+|...++ =.++...+..-+.+.+++.+.+|.+|.|..|.
T Consensus 18 G~~~p~f~l~~~~g~~~~l~~~~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~ 84 (158)
T 3hdc_A 18 GALAPNFKLPTLSGENKSLAQYRGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEK 84 (158)
T ss_dssp TSBCCCCEEECTTSCEEESGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSS
T ss_pred CCcCCCceeEcCCCCEEehHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCH
Confidence 4445555555567899999999986544444433 24566667777778888888899999998876
No 18
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=46.37 E-value=94 Score=23.97 Aligned_cols=65 Identities=12% Similarity=0.116 Sum_probs=46.5
Q ss_pred hhcccceeEec--CCceeehhhhcCcceEEEEeCC-HhHHHHHHhhchhhHHHHhhcCc------EEEEEeeCC
Q 024212 171 ESLSNLKLRVD--EKKIISVNNLRGIARLVICSGP-ASYIMESFKRSEPFTESLLERGV------LVVSFTTDG 235 (271)
Q Consensus 171 e~L~rL~Vrl~--~~r~v~L~~LRg~aRvVIvAG~-~e~V~~al~~Ae~~~~~L~~rgV------LVVPV~~dg 235 (271)
+.+-.+.+.-- +|+.++|.+++|..-+|...++ =.++...+..-+.+.+.+.++|+ .||.|..|.
T Consensus 35 ~~~p~f~l~~~~~~g~~~~l~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~ 108 (183)
T 3lwa_A 35 QQLPDIGGDSLMEEGTQINLSDFENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRD 108 (183)
T ss_dssp CCCCCCEEEBSSSTTCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSC
T ss_pred CCCCceeccccccCCcEecHHHhCCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCC
Confidence 44555666655 7899999999996554544443 24566666677778889999999 999998865
No 19
>2rrl_A FLIK, flagellar HOOK-length control protein; FLHB, bacterial flagella motor, P transport; NMR {Salmonella typhimurium}
Probab=46.10 E-value=57 Score=27.86 Aligned_cols=42 Identities=19% Similarity=0.254 Sum_probs=31.0
Q ss_pred cceEEEEeCCHhHHHHHHhhch-hhHHHHhhcCcEEEEEeeCCC
Q 024212 194 IARLVICSGPASYIMESFKRSE-PFTESLLERGVLVVSFTTDGN 236 (271)
Q Consensus 194 ~aRvVIvAG~~e~V~~al~~Ae-~~~~~L~~rgVLVVPV~~dg~ 236 (271)
.+.+.+.+ .-..|+++|+.+. .+|+.|.+.|+-+.=+..+..
T Consensus 111 q~~v~f~a-~~~~vReaLe~~lp~LRe~La~qGi~L~~v~Vs~~ 153 (169)
T 2rrl_A 111 QAQLQMVS-PHSHVRAALEAALPMLRTQLAESGIQLGQSSISSE 153 (169)
T ss_dssp EEEEEEEC-CSSHHHHHHHHTHHHHHHHHHTTTCEEEEEEEESS
T ss_pred EEEEEEEc-CCHHHHHHHHHHHHHHHHHHHHcCCCeeeEEEecC
Confidence 34555555 4557899999774 569999999999988777433
No 20
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=45.97 E-value=69 Score=23.85 Aligned_cols=61 Identities=15% Similarity=0.083 Sum_probs=42.7
Q ss_pred cceeEecCCceeehhhhcCcceEEEEeCC-HhHHHHHHhhchhhHHHHhhcCcEEEEEeeCC
Q 024212 175 NLKLRVDEKKIISVNNLRGIARLVICSGP-ASYIMESFKRSEPFTESLLERGVLVVSFTTDG 235 (271)
Q Consensus 175 rL~Vrl~~~r~v~L~~LRg~aRvVIvAG~-~e~V~~al~~Ae~~~~~L~~rgVLVVPV~~dg 235 (271)
.+.+.-.+|+.+++.+++|..-+|...++ =..+...+..-+.+.+.+.+.|+.||.|..|.
T Consensus 11 ~f~l~~~~G~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~ 72 (152)
T 2lrn_A 11 AITGIDLKGNSVSLNDFKGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDR 72 (152)
T ss_dssp CCEEECSSSCEEESGGGTTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCS
T ss_pred CceeEcCCCCEEeHHHcCCCEEEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEEEccC
Confidence 34444346899999999986554444433 23566666666777888888899999998873
No 21
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=45.69 E-value=81 Score=24.57 Aligned_cols=64 Identities=11% Similarity=0.256 Sum_probs=44.4
Q ss_pred hcccceeEecCCceeehhhhcCcceEEEEeCC-HhHHHHHHhhchhhHHHHhhcCcEEEEEeeCC
Q 024212 172 SLSNLKLRVDEKKIISVNNLRGIARLVICSGP-ASYIMESFKRSEPFTESLLERGVLVVSFTTDG 235 (271)
Q Consensus 172 ~L~rL~Vrl~~~r~v~L~~LRg~aRvVIvAG~-~e~V~~al~~Ae~~~~~L~~rgVLVVPV~~dg 235 (271)
.+-.+.+.--+|+.+++.+++|..-+|...++ =..+...+..-+.+.+++.+.||.||-|..|.
T Consensus 26 ~~p~f~l~~~~G~~~~l~~~~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~ 90 (183)
T 2obi_A 26 SMHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQCGKTEVNYTQLVDLHARYAECGLRILAFPCNQ 90 (183)
T ss_dssp SGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCC
T ss_pred cccceEEEcCCCCEeeHHHcCCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcCCeEEEEEECCC
Confidence 34445555456899999999996544433332 23566666666778888888999999998863
No 22
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=44.36 E-value=19 Score=28.11 Aligned_cols=54 Identities=11% Similarity=0.149 Sum_probs=35.0
Q ss_pred cCCceeehhhhcCcceEEEEe-CC-HhHHHHHHhhchhhHHHHhhcCcEEEEEeeC
Q 024212 181 DEKKIISVNNLRGIARLVICS-GP-ASYIMESFKRSEPFTESLLERGVLVVSFTTD 234 (271)
Q Consensus 181 ~~~r~v~L~~LRg~aRvVIvA-G~-~e~V~~al~~Ae~~~~~L~~rgVLVVPV~~d 234 (271)
.+|+.++|++|+|..-++... ++ -..+..-+..-+.+.+++.+.|+.||-|..|
T Consensus 18 ~~G~~~~l~d~~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~~~~~v~vs~d 73 (157)
T 4g2e_A 18 TELKKVKLSALKGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVNAVVLGISVD 73 (157)
T ss_dssp TTSCEEEGGGGTTSCEEEEECSCTTCCC------CCSCGGGGGGGCSSEEEEEESS
T ss_pred CCCCEEeHHHHCCCeEEEEecCCCCCCccccchhhcccccccccccCceEeeeccc
Confidence 458999999999965443332 32 2345566666677778889999999988774
No 23
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=43.89 E-value=44 Score=26.40 Aligned_cols=55 Identities=16% Similarity=0.125 Sum_probs=34.4
Q ss_pred cCCceeehhhhcCcceEEEEeCC--HhHHHHHHhhchhhHHHHhhc--CcEEEEEeeCC
Q 024212 181 DEKKIISVNNLRGIARLVICSGP--ASYIMESFKRSEPFTESLLER--GVLVVSFTTDG 235 (271)
Q Consensus 181 ~~~r~v~L~~LRg~aRvVIvAG~--~e~V~~al~~Ae~~~~~L~~r--gVLVVPV~~dg 235 (271)
.+|+.++|++|||..-+|-.--+ +.-+...+.....+.+.+.+. +|.+|-|..|-
T Consensus 20 ~~G~~v~l~d~~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvDp 78 (170)
T 4hde_A 20 QDGKPFGTKDLKGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVDP 78 (170)
T ss_dssp TTSCEEEHHHHTTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESCT
T ss_pred CCCCEEeHHHhCCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecCc
Confidence 46899999999996544433222 233544555445556666554 48888887763
No 24
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=43.35 E-value=48 Score=26.26 Aligned_cols=65 Identities=12% Similarity=0.261 Sum_probs=45.0
Q ss_pred hhcccceeEecCCceeehhhhcCcceEEEEeCC-HhHHHHHHhhchhhHHHHhhcCcEEEEEeeCC
Q 024212 171 ESLSNLKLRVDEKKIISVNNLRGIARLVICSGP-ASYIMESFKRSEPFTESLLERGVLVVSFTTDG 235 (271)
Q Consensus 171 e~L~rL~Vrl~~~r~v~L~~LRg~aRvVIvAG~-~e~V~~al~~Ae~~~~~L~~rgVLVVPV~~dg 235 (271)
+.+-.+.+.--+|+.++|.+++|..-+|...++ =..+...+..-+.+.+++.+.||.||-|..|.
T Consensus 26 ~~~p~f~l~~~~G~~~~l~~~~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~ 91 (190)
T 2vup_A 26 SSIFDFEVLDADHKPYNLVQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPCNQ 91 (190)
T ss_dssp CSGGGSCCBBTTSSBCCGGGGTTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTCEEEEEECCC
T ss_pred CcccCeEEEcCCCCEEEHHHcCCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcCCeEEEEEEcCc
Confidence 334444444446899999999996554444332 23565666667778888988999999998873
No 25
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=43.02 E-value=97 Score=22.74 Aligned_cols=62 Identities=13% Similarity=0.107 Sum_probs=42.8
Q ss_pred cccceeEecCCceeehhhhcCcceEEEEeCC-HhHHHHHHhhchhhHHHHhhcCcEEEEEeeC
Q 024212 173 LSNLKLRVDEKKIISVNNLRGIARLVICSGP-ASYIMESFKRSEPFTESLLERGVLVVSFTTD 234 (271)
Q Consensus 173 L~rL~Vrl~~~r~v~L~~LRg~aRvVIvAG~-~e~V~~al~~Ae~~~~~L~~rgVLVVPV~~d 234 (271)
+-.+.+.--+|+.+++.++++..-+|...++ =.++...+..-+.+.+.+.+.++.||.|..+
T Consensus 8 ~p~~~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~ 70 (153)
T 2l5o_A 8 APAFSLPDLHGKTVSNADLQGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQP 70 (153)
T ss_dssp CCSCEEECTTSCEEEHHHHTTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECT
T ss_pred CCCcEeecCCCCCccHHHhCCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEEecC
Confidence 3344444456899999999886655555443 2445666666666777888889999988765
No 26
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=41.59 E-value=43 Score=25.40 Aligned_cols=61 Identities=16% Similarity=0.181 Sum_probs=39.7
Q ss_pred cceeEecCCceeehhhhcCcceEEEEeCCHh--HHHHHHhhchhhHHHHhhcC--cEEEEEeeCC
Q 024212 175 NLKLRVDEKKIISVNNLRGIARLVICSGPAS--YIMESFKRSEPFTESLLERG--VLVVSFTTDG 235 (271)
Q Consensus 175 rL~Vrl~~~r~v~L~~LRg~aRvVIvAG~~e--~V~~al~~Ae~~~~~L~~rg--VLVVPV~~dg 235 (271)
.+.+.-.+|+.++|.+++|..-+|....+.= .+...+..-..+.+.+.+.| |-||-|..|.
T Consensus 15 ~f~l~~~~G~~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~ 79 (174)
T 1xzo_A 15 PFTFQNQDGKNVSLESLKGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDP 79 (174)
T ss_dssp CCEEECTTSCEEETGGGTTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCT
T ss_pred CcEEEcCCCCEEehhhcCCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCC
Confidence 3444445689999999999664444443321 34444555555667777776 9999998874
No 27
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=40.93 E-value=50 Score=24.81 Aligned_cols=63 Identities=8% Similarity=0.191 Sum_probs=41.7
Q ss_pred hcccceeEecCCceeehhhhcCc-ceEEEEe-CC-HhHHHHHHhhchhhHHHHhhcCcEEEEEeeC
Q 024212 172 SLSNLKLRVDEKKIISVNNLRGI-ARLVICS-GP-ASYIMESFKRSEPFTESLLERGVLVVSFTTD 234 (271)
Q Consensus 172 ~L~rL~Vrl~~~r~v~L~~LRg~-aRvVIvA-G~-~e~V~~al~~Ae~~~~~L~~rgVLVVPV~~d 234 (271)
.+-.+.+.-.+|+.+++.+++|. .-++... ++ -..+...+..-+.+.+++.+.||-||-|..|
T Consensus 14 ~~p~f~l~~~~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is~d 79 (160)
T 1xvw_A 14 TAPDFTLRDQNQQLVTLRGYRGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISVG 79 (160)
T ss_dssp BCCCCEEECTTSCEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEESC
T ss_pred CCCCeEeEcCCCCEEeHHHhcCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEeCC
Confidence 34444454456899999999997 4444432 22 3456666666566667777789999999875
No 28
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=40.20 E-value=54 Score=24.42 Aligned_cols=54 Identities=13% Similarity=0.097 Sum_probs=38.5
Q ss_pred cCCceeehhhhcCcceEEEEeCCH-hHHHHHHhhchhhHHHHhhcCcEEEEEeeC
Q 024212 181 DEKKIISVNNLRGIARLVICSGPA-SYIMESFKRSEPFTESLLERGVLVVSFTTD 234 (271)
Q Consensus 181 ~~~r~v~L~~LRg~aRvVIvAG~~-e~V~~al~~Ae~~~~~L~~rgVLVVPV~~d 234 (271)
.+|+.++|.+++|..-+|...++- ..+...+..-+.+.+++.+.+|.||.|..|
T Consensus 12 ~~G~~~~l~~~~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d 66 (151)
T 3raz_A 12 KDNTPQSLQSLKAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALD 66 (151)
T ss_dssp TTCCEECGGGCCSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESS
T ss_pred cCCCEecHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECC
Confidence 468999999999965544444432 345555556666667777789999999885
No 29
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=40.16 E-value=88 Score=24.36 Aligned_cols=60 Identities=10% Similarity=0.223 Sum_probs=42.3
Q ss_pred ceeEecCCceeehhhhcCcceEEEEeC-CHhHHHHHHhhchhhHHHHhhcCcEEEEEeeCC
Q 024212 176 LKLRVDEKKIISVNNLRGIARLVICSG-PASYIMESFKRSEPFTESLLERGVLVVSFTTDG 235 (271)
Q Consensus 176 L~Vrl~~~r~v~L~~LRg~aRvVIvAG-~~e~V~~al~~Ae~~~~~L~~rgVLVVPV~~dg 235 (271)
+.+.--+|+.+++++++|..-+|..-+ -=..+...+..-+.+.+++.+.|+.||-|..|.
T Consensus 21 f~l~d~~G~~v~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~ 81 (180)
T 3kij_A 21 FEVKDAKGRTVSLEKYKGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQ 81 (180)
T ss_dssp CEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTTSEEEEEEECCC
T ss_pred eEEecCCCCEecHHHcCCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccCCeEEEEEECCc
Confidence 344435689999999999643333322 223567777777778888999999999998763
No 30
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=39.84 E-value=60 Score=25.88 Aligned_cols=52 Identities=21% Similarity=0.109 Sum_probs=37.6
Q ss_pred CC--ceeehhhhcCcceEEEEeCC---HhHHHHHHhhchhhHHHHhhcCcEEEEEeeC
Q 024212 182 EK--KIISVNNLRGIARLVICSGP---ASYIMESFKRSEPFTESLLERGVLVVSFTTD 234 (271)
Q Consensus 182 ~~--r~v~L~~LRg~aRvVIvAG~---~e~V~~al~~Ae~~~~~L~~rgVLVVPV~~d 234 (271)
+| +.++|++|+|.. +||.--+ -..+..-+..-+.+.+++.+.||-||-|..|
T Consensus 17 ~G~~~~v~l~~~~Gk~-vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~~v~vv~Is~d 73 (186)
T 1n8j_A 17 NGEFIEVTEKDTEGRW-SVFFFYPADFTFVSPTELGDVADHYEELQKLGVDVYSVSTD 73 (186)
T ss_dssp TTEEEEEEHHHHTTSE-EEEEECSCTTCSHHHHHHHHHHHHHHHHHHTTEEEEEEESS
T ss_pred CCcceEEEHHHHCCCe-EEEEEECCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEECC
Confidence 46 899999999853 3333222 2356666777777788888899999999875
No 31
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=39.30 E-value=53 Score=25.28 Aligned_cols=53 Identities=13% Similarity=0.360 Sum_probs=37.3
Q ss_pred cCCceeehhhhcCcceEEEEeC-CHhHHHHHHhhchhhHHHHhhcCcEEEEEeeC
Q 024212 181 DEKKIISVNNLRGIARLVICSG-PASYIMESFKRSEPFTESLLERGVLVVSFTTD 234 (271)
Q Consensus 181 ~~~r~v~L~~LRg~aRvVIvAG-~~e~V~~al~~Ae~~~~~L~~rgVLVVPV~~d 234 (271)
.+|+.++|++++|..-+|...+ .-..+. .+..-+.+.+++.+.||.||-|..|
T Consensus 20 ~~G~~~~l~~~~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~~v~vv~vs~d 73 (171)
T 3cmi_A 20 KKGQPFPFDQLKGKVVLIVNVASKCGFTP-QYKELEALYKRYKDEGFTIIGFPCN 73 (171)
T ss_dssp TTSCBCCGGGGTTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred CCCCEecHHHcCCCEEEEEEEecCCCcch-hHHHHHHHHHHhccCCeEEEEEECc
Confidence 3589999999999654333322 222455 5556667788888899999999885
No 32
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=39.20 E-value=1.1e+02 Score=23.98 Aligned_cols=66 Identities=17% Similarity=0.300 Sum_probs=45.3
Q ss_pred hhhcccceeEecCCceeehhhhcCcceEEEEeCC-HhHHHHHHhhchhhHHHHhhcCcEEEEEeeCC
Q 024212 170 EESLSNLKLRVDEKKIISVNNLRGIARLVICSGP-ASYIMESFKRSEPFTESLLERGVLVVSFTTDG 235 (271)
Q Consensus 170 Ee~L~rL~Vrl~~~r~v~L~~LRg~aRvVIvAG~-~e~V~~al~~Ae~~~~~L~~rgVLVVPV~~dg 235 (271)
.+.+-.+.+.--+|+.+++.+++|..-+|...++ =..+...+..-+.+.+++.+.||-||-|..|.
T Consensus 26 g~~~p~f~l~~~~G~~~~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~v~vv~vs~d~ 92 (181)
T 2p31_A 26 EQDFYDFKAVNIRGKLVSLEKYRGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQ 92 (181)
T ss_dssp -CCGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCC
T ss_pred CCccCceEeecCCCCEecHHHcCCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcCCEEEEEEECcC
Confidence 3445555555556899999999996443333322 23566666667777888888999999998863
No 33
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=38.64 E-value=57 Score=27.30 Aligned_cols=52 Identities=10% Similarity=0.170 Sum_probs=40.6
Q ss_pred CCceeehhhhcCcceEEEEeCCHh---HHHHHHhhchhhHHHHhhcCcEEEEEeeC
Q 024212 182 EKKIISVNNLRGIARLVICSGPAS---YIMESFKRSEPFTESLLERGVLVVSFTTD 234 (271)
Q Consensus 182 ~~r~v~L~~LRg~aRvVIvAG~~e---~V~~al~~Ae~~~~~L~~rgVLVVPV~~d 234 (271)
+| .++|.+++|..-+|++--++. .+..-+..-..+.+++.++||-||-|..|
T Consensus 20 ~G-~v~l~d~~Gk~~vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~vS~D 74 (220)
T 1xcc_A 20 DG-DFELYKYIENSWAILFSHPNDFTPVCTTELAELGKMHEDFLKLNCKLIGFSCN 74 (220)
T ss_dssp SS-CEEHHHHTTTSEEEEECCSCTTCHHHHHHHHHHHHTHHHHHTTTEEEEEEESS
T ss_pred CC-cEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeCC
Confidence 56 899999999766777765544 45666667777888899999999999886
No 34
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=38.63 E-value=62 Score=27.09 Aligned_cols=70 Identities=6% Similarity=-0.001 Sum_probs=44.5
Q ss_pred HHHHhhhhhcccceeEec--CC--ceeehhhh-cCcceEEEEeCCHh---HHHHHHhhchhhHHHHhhcCcEEEEEeeC
Q 024212 164 LARLSREESLSNLKLRVD--EK--KIISVNNL-RGIARLVICSGPAS---YIMESFKRSEPFTESLLERGVLVVSFTTD 234 (271)
Q Consensus 164 lari~REe~L~rL~Vrl~--~~--r~v~L~~L-Rg~aRvVIvAG~~e---~V~~al~~Ae~~~~~L~~rgVLVVPV~~d 234 (271)
|..+.-.+.+-.+.+.-- +| +.++|+++ +|.. +||.-.++. .+...+..-+.+.+++.+.||-||-|..|
T Consensus 22 M~~l~~G~~aP~F~l~~~~~~G~~~~v~L~d~~~Gk~-vvl~F~patwCp~C~~e~p~l~~l~~~~~~~~v~vv~Is~D 99 (221)
T 2c0d_A 22 MKLSLVTKKAYNFTAQGLNKNNEIINVDLSSFIGQKY-CCLLFYPLNYTFVCPTEIIEFNKHIKDFENKNVELLGISVD 99 (221)
T ss_dssp ----CTTSBCCCCEEEEECTTSCEEEEEGGGGTTTCE-EEEEECCCCTTTCCHHHHHHHHHTHHHHHHTTEEEEEEESS
T ss_pred cccCCCCCCCCCeEEeccccCCCccEEeHHHHcCCCe-EEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 333444555555555443 67 89999999 9864 444444333 34555666667777888899999999874
No 35
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=38.17 E-value=36 Score=24.75 Aligned_cols=64 Identities=6% Similarity=0.008 Sum_probs=41.5
Q ss_pred hcccceeEecCCceeehhhhcCcceEEEEeCC-HhHHHHHHhhchhhHHHHhhcCcEEEEEeeCC
Q 024212 172 SLSNLKLRVDEKKIISVNNLRGIARLVICSGP-ASYIMESFKRSEPFTESLLERGVLVVSFTTDG 235 (271)
Q Consensus 172 ~L~rL~Vrl~~~r~v~L~~LRg~aRvVIvAG~-~e~V~~al~~Ae~~~~~L~~rgVLVVPV~~dg 235 (271)
.+-.+.+.--+|+.+++.+++|..-+|...++ =.++...+..-+.+.+.+.+.||.||.|..|.
T Consensus 10 ~~p~~~l~~~~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~ 74 (148)
T 3hcz_A 10 KAPNLYMTDTTGTYRYLYDVQAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIER 74 (148)
T ss_dssp BCCCCCCBCTTSCBCCGGGCCCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCS
T ss_pred cCCceEEecCCCCEEEhHHcCCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEecC
Confidence 33444444456899999999885444433332 12344445555667788888899999999864
No 36
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=38.02 E-value=1.1e+02 Score=22.11 Aligned_cols=61 Identities=11% Similarity=0.099 Sum_probs=39.2
Q ss_pred cceeEecCCceeehhhhcCcceEEEEeCC-HhHHHHHH---hhchhhHHHHhhcCcEEEEEeeCC
Q 024212 175 NLKLRVDEKKIISVNNLRGIARLVICSGP-ASYIMESF---KRSEPFTESLLERGVLVVSFTTDG 235 (271)
Q Consensus 175 rL~Vrl~~~r~v~L~~LRg~aRvVIvAG~-~e~V~~al---~~Ae~~~~~L~~rgVLVVPV~~dg 235 (271)
.+.+.-.+|+.+++.+++|..-+|...++ =..+...+ .....+.+.+.+.++.||-|..|.
T Consensus 9 ~f~l~~~~g~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~ 73 (142)
T 3ewl_A 9 DFTYVTVHGDNSRMSRLKAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDE 73 (142)
T ss_dssp CCEEECTTCCEEEGGGCCCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSS
T ss_pred CCEEECCCCCEEEhhhcCCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecC
Confidence 34444456899999999985433333332 23344443 333447788888999999998864
No 37
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=37.84 E-value=44 Score=28.96 Aligned_cols=52 Identities=17% Similarity=0.172 Sum_probs=38.1
Q ss_pred CceeehhhhcCcceEEEEeCCHh---HHHHHHhhchhhHHHHhhcCcEEEEEeeCC
Q 024212 183 KKIISVNNLRGIARLVICSGPAS---YIMESFKRSEPFTESLLERGVLVVSFTTDG 235 (271)
Q Consensus 183 ~r~v~L~~LRg~aRvVIvAG~~e---~V~~al~~Ae~~~~~L~~rgVLVVPV~~dg 235 (271)
++.++|+++||.. ||+.-=|++ .+..-+..-+...+++.++|+.|+-|..|.
T Consensus 42 ~~~vsLsd~~GK~-vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~~g~~vigiS~Ds 96 (216)
T 3sbc_A 42 FDEVSLDKYKGKY-VVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQGAQVLFASTDS 96 (216)
T ss_dssp EEEECGGGGTTSE-EEEEECSCTTSSHHHHHHHHHHHHHHHHHHTTEEEEEEESSC
T ss_pred CcEEehHHhCCCe-EEEEEEcCCCCCcCchhhhHHHHhHHhhccCCceEEEeecCc
Confidence 4889999999953 454443433 355556666677889999999999999853
No 38
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=37.76 E-value=57 Score=26.83 Aligned_cols=52 Identities=21% Similarity=0.132 Sum_probs=38.0
Q ss_pred CCceeehhhhcCcceEEEEeCCHh---HHHHHHhhchhhHHHHhhcCcEEEEEeeC
Q 024212 182 EKKIISVNNLRGIARLVICSGPAS---YIMESFKRSEPFTESLLERGVLVVSFTTD 234 (271)
Q Consensus 182 ~~r~v~L~~LRg~aRvVIvAG~~e---~V~~al~~Ae~~~~~L~~rgVLVVPV~~d 234 (271)
+++.++|++++|.. +||.-.++. .+..-+..-+.+.+++.+.||-||-|..|
T Consensus 37 ~g~~v~l~d~~Gk~-vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~~v~vv~Is~D 91 (211)
T 2pn8_A 37 EFKELKLTDYRGKY-LVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVD 91 (211)
T ss_dssp EEEEEEGGGGTTSE-EEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESS
T ss_pred CCcEEEHHHhCCCe-EEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECC
Confidence 36899999999963 444444332 45666666677788888899999999885
No 39
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=37.13 E-value=31 Score=25.58 Aligned_cols=64 Identities=9% Similarity=0.011 Sum_probs=39.3
Q ss_pred hcccceeEecCCceeehhhhcCcceEEEEeCC-HhHHHHHHhhchhhHHHHhhcCcEEEEEeeCCC
Q 024212 172 SLSNLKLRVDEKKIISVNNLRGIARLVICSGP-ASYIMESFKRSEPFTESLLERGVLVVSFTTDGN 236 (271)
Q Consensus 172 ~L~rL~Vrl~~~r~v~L~~LRg~aRvVIvAG~-~e~V~~al~~Ae~~~~~L~~rgVLVVPV~~dg~ 236 (271)
.+-.+.+ -.+|+.++|++++|..-+|...++ =..+...+..-+.+.+++.+.|+.||-|.+|.+
T Consensus 12 ~~P~f~l-~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~ 76 (143)
T 4fo5_A 12 LAPRIEF-LGNDAKASFHNQLGRYTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSISMDEK 76 (143)
T ss_dssp BCCCCCC------CCCSCCSSCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECCSC
T ss_pred cCCceEE-cCCCCEEEHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEccCC
Confidence 3344445 245789999999995444433333 234566666666677777778999999998753
No 40
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=36.83 E-value=1.4e+02 Score=22.89 Aligned_cols=63 Identities=16% Similarity=0.150 Sum_probs=43.0
Q ss_pred ccceeEecCCceeehhhhcCcceEEEEeCC-HhHHHHHHhhchhhHHHHhhcCcEEEEEeeCCC
Q 024212 174 SNLKLRVDEKKIISVNNLRGIARLVICSGP-ASYIMESFKRSEPFTESLLERGVLVVSFTTDGN 236 (271)
Q Consensus 174 ~rL~Vrl~~~r~v~L~~LRg~aRvVIvAG~-~e~V~~al~~Ae~~~~~L~~rgVLVVPV~~dg~ 236 (271)
-.+.+.-.+|+.+++.+++|..-+|...++ =..+...+..-+.+.+.+.+.+|.||-|..|..
T Consensus 41 p~f~l~~~~G~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~ 104 (186)
T 1jfu_A 41 PDLAFEDADGKPKKLSDFRGKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTR 104 (186)
T ss_dssp CCCEEECTTSCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCCS
T ss_pred CCcEeEcCCCCEeeHHHcCCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCCC
Confidence 333443346899999999986555544433 235555566666677777778999999998754
No 41
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=36.55 E-value=26 Score=30.37 Aligned_cols=52 Identities=21% Similarity=0.132 Sum_probs=38.4
Q ss_pred CCceeehhhhcCcceEEEEeCCHh---HHHHHHhhchhhHHHHhhcCcEEEEEeeC
Q 024212 182 EKKIISVNNLRGIARLVICSGPAS---YIMESFKRSEPFTESLLERGVLVVSFTTD 234 (271)
Q Consensus 182 ~~r~v~L~~LRg~aRvVIvAG~~e---~V~~al~~Ae~~~~~L~~rgVLVVPV~~d 234 (271)
+++.++|.+++|.. +||.-.++. .+..-+..-+.+.+++.++||-||-|..|
T Consensus 80 ~G~~vsLsd~kGK~-vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~gv~vv~IS~D 134 (254)
T 3tjj_A 80 EFKELKLTDYRGKY-LVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVD 134 (254)
T ss_dssp EEEEEEGGGGTTSE-EEEEECSCTTCSSCCHHHHHHHHTHHHHHTTTEEEEEEESS
T ss_pred CCcEEeHHHHCCCe-EEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEcCC
Confidence 46899999999963 455554433 45555666667788899999999999875
No 42
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=36.40 E-value=1.2e+02 Score=23.69 Aligned_cols=61 Identities=16% Similarity=0.074 Sum_probs=42.9
Q ss_pred cceeEecCCceeehhhhcCcceEEEEeCCHh--HHHHHHhhchhhHHHHhh--cCcEEEEEeeCC
Q 024212 175 NLKLRVDEKKIISVNNLRGIARLVICSGPAS--YIMESFKRSEPFTESLLE--RGVLVVSFTTDG 235 (271)
Q Consensus 175 rL~Vrl~~~r~v~L~~LRg~aRvVIvAG~~e--~V~~al~~Ae~~~~~L~~--rgVLVVPV~~dg 235 (271)
...+.-.+|+.++|++|+|..-+|..-.+.= .+...+..-+.+.+++.+ .+|-||-|..|.
T Consensus 10 ~f~l~d~~G~~v~l~~~~Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~ 74 (170)
T 3me7_A 10 DITLVDSYGNEFQLKNLKGKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDP 74 (170)
T ss_dssp TCEEEETTCCEEEGGGGTTSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCT
T ss_pred CeEEEcCCcCEEchHHhCCCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCC
Confidence 4445445689999999998765555554432 466667766777777865 569999888874
No 43
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=35.77 E-value=80 Score=25.07 Aligned_cols=51 Identities=16% Similarity=0.174 Sum_probs=38.0
Q ss_pred ceeehhhhcCcceEEEEeCC---HhHHHHHHhhchhhHHHHhhcCcEEEEEeeCC
Q 024212 184 KIISVNNLRGIARLVICSGP---ASYIMESFKRSEPFTESLLERGVLVVSFTTDG 235 (271)
Q Consensus 184 r~v~L~~LRg~aRvVIvAG~---~e~V~~al~~Ae~~~~~L~~rgVLVVPV~~dg 235 (271)
+.++|.+++|.. +||.-.+ =..+...+..-+.+.+++.++||-||-|..|.
T Consensus 25 ~~v~l~~~~gk~-vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~ 78 (197)
T 1qmv_A 25 KEVKLSDYKGKY-VVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVLGVSVDS 78 (197)
T ss_dssp EEEEGGGGTTSE-EEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSC
T ss_pred cEEEHHHHCCCe-EEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 899999999854 4444442 23566666666777888888999999998864
No 44
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=35.68 E-value=97 Score=23.48 Aligned_cols=60 Identities=12% Similarity=0.137 Sum_probs=40.4
Q ss_pred ccceeEecCCceeehhhhcCcceEEEEeCC--HhHHHHHHhhchhhHHHHhhcCcEEEEEeeCC
Q 024212 174 SNLKLRVDEKKIISVNNLRGIARLVICSGP--ASYIMESFKRSEPFTESLLERGVLVVSFTTDG 235 (271)
Q Consensus 174 ~rL~Vrl~~~r~v~L~~LRg~aRvVIvAG~--~e~V~~al~~Ae~~~~~L~~rgVLVVPV~~dg 235 (271)
-...+.-.+|+.+++.+++|..-++....+ -..+...+..-+.+.+++ .+|-||-|..|.
T Consensus 25 p~f~l~~~~G~~~~l~~~~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~--~~~~vv~is~d~ 86 (167)
T 2jsy_A 25 PDFTVLTNSLEEKSLADMKGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL--GDVNVYTISADL 86 (167)
T ss_dssp CCCEEEBTTCCEEEHHHHTTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH--SSCEEEEEECSS
T ss_pred CceEEECCCCCEeeHHHhCCCeEEEEEecCCCCCchHHHHHHHHHHHHHc--CCCEEEEEECCC
Confidence 334444346899999999987544443333 356666666666666666 789999998863
No 45
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=34.44 E-value=73 Score=23.67 Aligned_cols=67 Identities=7% Similarity=-0.013 Sum_probs=45.1
Q ss_pred hhhhcccceeEecCCceeehh--hhcCcceEEEEeCC-HhH--HHHHHhhchhhHHHH-hhcCcEEEEEeeCC
Q 024212 169 REESLSNLKLRVDEKKIISVN--NLRGIARLVICSGP-ASY--IMESFKRSEPFTESL-LERGVLVVSFTTDG 235 (271)
Q Consensus 169 REe~L~rL~Vrl~~~r~v~L~--~LRg~aRvVIvAG~-~e~--V~~al~~Ae~~~~~L-~~rgVLVVPV~~dg 235 (271)
-++.+-.+.+.-.+|+.++|. +++|..-+|....+ =.. +...+..-+.+.+++ .+.||-||-|.+|.
T Consensus 7 ~G~~~p~f~l~~~~g~~~~l~~~~~~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~ 79 (150)
T 3fw2_A 7 IGKYAPFFSLPNAKGEKITRSSDAFKQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDV 79 (150)
T ss_dssp TTSBCCCCCEEBTTCCEECTTSTTTTTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCS
T ss_pred CCCcCCccEeECCCCCEEecchhhhCCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCC
Confidence 344455555555678999999 99985433333222 233 556666666778888 88899999999874
No 46
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=34.18 E-value=1.6e+02 Score=23.50 Aligned_cols=62 Identities=11% Similarity=0.081 Sum_probs=40.9
Q ss_pred ccceeEecCCceeehhhhcCcceEEEEeCCH-h-HHHHHHhhchhhHHHHhhc---CcEEEEEeeCC
Q 024212 174 SNLKLRVDEKKIISVNNLRGIARLVICSGPA-S-YIMESFKRSEPFTESLLER---GVLVVSFTTDG 235 (271)
Q Consensus 174 ~rL~Vrl~~~r~v~L~~LRg~aRvVIvAG~~-e-~V~~al~~Ae~~~~~L~~r---gVLVVPV~~dg 235 (271)
..+.+.-.+|+.+++++++|..-+|...++- . .+...+..-+.+.+.+.+. +|-||-|..|.
T Consensus 22 p~f~l~d~~G~~v~l~~~~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~ 88 (200)
T 2b7k_A 22 GPFHLEDMYGNEFTEKNLLGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDP 88 (200)
T ss_dssp CCCEEEETTSCEEEGGGGTTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCT
T ss_pred CCEEEEcCCCCEEeHHHcCCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCC
Confidence 3445544568999999999865444444332 2 3556666556666677754 89999888874
No 47
>3sr0_A Adenylate kinase; phosphoryl transfer analogue, ALF4, transferase (phosphotran phosphoryl transfer, nucleotide-binding; HET: ADP AMP; 1.56A {Aquifex aeolicus} PDB: 2rh5_A 2rgx_A*
Probab=33.79 E-value=10 Score=31.93 Aligned_cols=12 Identities=50% Similarity=1.055 Sum_probs=10.5
Q ss_pred eeecccCCCCcc
Q 024212 9 YILGPVGSGRGY 20 (271)
Q Consensus 9 ~~~~~~~~~~~~ 20 (271)
.++||+|||.|.
T Consensus 4 il~GpPGsGKgT 15 (206)
T 3sr0_A 4 VFLGPPGAGKGT 15 (206)
T ss_dssp EEECSTTSSHHH
T ss_pred EEECCCCCCHHH
Confidence 578999999994
No 48
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=33.78 E-value=97 Score=23.43 Aligned_cols=58 Identities=17% Similarity=0.158 Sum_probs=39.8
Q ss_pred ceeEecCCceeehhhhcCcceEEEEe---C-CHhHHHHHHhhchhhHHHHhhcCcEEEEEeeC
Q 024212 176 LKLRVDEKKIISVNNLRGIARLVICS---G-PASYIMESFKRSEPFTESLLERGVLVVSFTTD 234 (271)
Q Consensus 176 L~Vrl~~~r~v~L~~LRg~aRvVIvA---G-~~e~V~~al~~Ae~~~~~L~~rgVLVVPV~~d 234 (271)
..+.-.+|+.++|++++|..++||+. + .-..+...+..-+.+.+++.+.| .||-|..|
T Consensus 16 f~l~~~~G~~v~l~~~~gk~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~-~vv~is~d 77 (159)
T 2a4v_A 16 LSLLNEDNDSISLKKITENNRVVVFFVYPRASTPGSTRQASGFRDNYQELKEYA-AVFGLSAD 77 (159)
T ss_dssp CEEECTTSCEEEHHHHHHHCSEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTC-EEEEEESC
T ss_pred eEEECCCCCEEeHHHHhCCCCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCC-cEEEEeCC
Confidence 33433468999999999974433332 2 23466777777777888888888 88888765
No 49
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=33.61 E-value=88 Score=25.71 Aligned_cols=52 Identities=10% Similarity=0.118 Sum_probs=38.4
Q ss_pred CC--ceeehhhh-cCcceEEEEeCCH---hHHHHHHhhchhhHHHHhhcCcEEEEEeeC
Q 024212 182 EK--KIISVNNL-RGIARLVICSGPA---SYIMESFKRSEPFTESLLERGVLVVSFTTD 234 (271)
Q Consensus 182 ~~--r~v~L~~L-Rg~aRvVIvAG~~---e~V~~al~~Ae~~~~~L~~rgVLVVPV~~d 234 (271)
+| +.++|.++ +|.. +||.-.++ ..+...+..-+.+.+++.+.||-||-|..|
T Consensus 38 ~G~~~~v~l~d~~~gk~-vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~D 95 (213)
T 2i81_A 38 DNSFGEVNLTQFIGKKY-VLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCSVD 95 (213)
T ss_dssp TSCEEEEEGGGGTTTCE-EEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEEEEESS
T ss_pred CCceeEEeHHHHcCCCe-EEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 57 89999999 8854 44444432 355666666677778888899999999886
No 50
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=33.38 E-value=1.4e+02 Score=21.95 Aligned_cols=54 Identities=13% Similarity=0.137 Sum_probs=38.3
Q ss_pred cCCceeehhhhcCcceEEEEeCC-HhHHHH-HHhhchhhHHHHhhcCcEEEEEeeC
Q 024212 181 DEKKIISVNNLRGIARLVICSGP-ASYIME-SFKRSEPFTESLLERGVLVVSFTTD 234 (271)
Q Consensus 181 ~~~r~v~L~~LRg~aRvVIvAG~-~e~V~~-al~~Ae~~~~~L~~rgVLVVPV~~d 234 (271)
.+|+.+++.+++|..-+|...++ =..+.. ++..-+.+.+++.+.+|.||-|.+|
T Consensus 16 ~~g~~~~l~~~~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~ 71 (158)
T 3eyt_A 16 NSATDLTLADLRGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTV 71 (158)
T ss_dssp SCSSCCCTGGGTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECC
T ss_pred cCCCccCHHHhCCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEec
Confidence 56799999999986444433332 234555 4666667777787789999999986
No 51
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=33.28 E-value=92 Score=24.89 Aligned_cols=50 Identities=16% Similarity=0.162 Sum_probs=37.0
Q ss_pred ceeehhhhcCcceEEEEeCCH---hHHHHHHhhchhhHHHHhhcCcEEEEEeeC
Q 024212 184 KIISVNNLRGIARLVICSGPA---SYIMESFKRSEPFTESLLERGVLVVSFTTD 234 (271)
Q Consensus 184 r~v~L~~LRg~aRvVIvAG~~---e~V~~al~~Ae~~~~~L~~rgVLVVPV~~d 234 (271)
+.++|.+++|.. +||.-.++ ..+...+..-+.+.+++.+.||-||-|..|
T Consensus 27 ~~v~l~~~~gk~-vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~vi~Is~D 79 (202)
T 1uul_A 27 KKVALTSYKGKW-LVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACSMD 79 (202)
T ss_dssp EEEEGGGGTTSE-EEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEEEEESS
T ss_pred cEEEHHHhCCCe-EEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 899999999853 34433322 355666666677788888899999999886
No 52
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=33.19 E-value=67 Score=26.64 Aligned_cols=56 Identities=14% Similarity=0.297 Sum_probs=37.8
Q ss_pred cccceeEecC-CceeehhhhcCcceEEEE------eCCHhHHHHHHhhchhhHHHHhhcCcEEEEEeeC
Q 024212 173 LSNLKLRVDE-KKIISVNNLRGIARLVIC------SGPASYIMESFKRSEPFTESLLERGVLVVSFTTD 234 (271)
Q Consensus 173 L~rL~Vrl~~-~r~v~L~~LRg~aRvVIv------AG~~e~V~~al~~Ae~~~~~L~~rgVLVVPV~~d 234 (271)
+-.+.+.-.+ |+.++|++|||. ||+| +|+- .-+..-+.+.+++.+.|+.||-|..|
T Consensus 17 ~pdF~l~d~~~G~~v~Ls~~kGK--vvll~F~At~C~~c----~e~p~L~~l~~~~~~~g~~vlgvs~d 79 (207)
T 2r37_A 17 IYEYGALTIDGEEYIPFKQYAGK--YVLFVNVASYGGLT----GQYIELNALQEELAPFGLVILGFPCN 79 (207)
T ss_dssp GGGCEEEBTTSSCEEEGGGGTTS--EEEEEEECSSSTTT----THHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred cCCeEeeeCCCCCEEcHHHhCCC--EEEEEEeCCCCCCh----HHHHHHHHHHHHhccCCEEEEEEECc
Confidence 3344444456 899999999995 4444 3442 12444466777888899999999864
No 53
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=32.67 E-value=1.5e+02 Score=21.93 Aligned_cols=56 Identities=7% Similarity=0.004 Sum_probs=39.2
Q ss_pred cCCceeehhhhcCcceEEEEeCCH-h-HHHHHHhhchhhHHHHhh----cCcEEEEEeeCCC
Q 024212 181 DEKKIISVNNLRGIARLVICSGPA-S-YIMESFKRSEPFTESLLE----RGVLVVSFTTDGN 236 (271)
Q Consensus 181 ~~~r~v~L~~LRg~aRvVIvAG~~-e-~V~~al~~Ae~~~~~L~~----rgVLVVPV~~dg~ 236 (271)
.+|+.+++.+++|..-+|....+- . .+...+..-+.+.+++.+ .+|-||-|..|.+
T Consensus 11 ~~G~~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~ 72 (164)
T 2ggt_A 11 HTGERKTDKDYLGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPE 72 (164)
T ss_dssp TTSCEEEGGGGTTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTT
T ss_pred CCCCEEeHHHcCCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCC
Confidence 468999999999865444333321 2 366666666777778877 4999999988754
No 54
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=32.01 E-value=1.5e+02 Score=22.83 Aligned_cols=64 Identities=9% Similarity=0.256 Sum_probs=43.6
Q ss_pred cccceeE-ecCCceeehhhhcCcc-eEEEEeCC-HhHHHHHHhhchhhHHHHhhcCcEEEEEeeCCC
Q 024212 173 LSNLKLR-VDEKKIISVNNLRGIA-RLVICSGP-ASYIMESFKRSEPFTESLLERGVLVVSFTTDGN 236 (271)
Q Consensus 173 L~rL~Vr-l~~~r~v~L~~LRg~a-RvVIvAG~-~e~V~~al~~Ae~~~~~L~~rgVLVVPV~~dg~ 236 (271)
+-.+.+. --+|+.++|.+++|.. -+|....+ =..+...+..-+.+.+++.+.||.||.|..|..
T Consensus 24 ~p~f~l~~~~~G~~~~l~~~~gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~ 90 (196)
T 2ywi_A 24 APPFALTNVIDGNVVRLEDVKSDAATVIMFICNHCPFVKHVQHELVRLANDYMPKGVSFVAINSNDA 90 (196)
T ss_dssp CCCCEEEETTTCCEEEHHHHCCSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECSCT
T ss_pred CCceeeeecCCCCEEeHHHhCCCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCcc
Confidence 3344454 3458999999999975 33333322 245666666667778888888999999998643
No 55
>2amj_A Modulator of drug activity B; oxidoreductase, menadione, DT-diaphorase, montreal-kingston structural genomics initiative, BSGI; 1.80A {Escherichia coli} PDB: 2b3d_A*
Probab=31.95 E-value=1.3e+02 Score=24.81 Aligned_cols=69 Identities=13% Similarity=0.091 Sum_probs=42.2
Q ss_pred CcceEEEEeCCHhHH----HHHHhhchhhHHHHhhcCcEEEEEeeCCCCCCCCccchHHHHHhhhhhccceeeeecccC
Q 024212 193 GIARLVICSGPASYI----MESFKRSEPFTESLLERGVLVVSFTTDGNIPSFEFEESEEMKEFTRKRKRLWQLTPVYVS 267 (271)
Q Consensus 193 g~aRvVIvAG~~e~V----~~al~~Ae~~~~~L~~rgVLVVPV~~dg~s~~~~f~~~~~~~~~~~~~~rrw~a~Pv~~~ 267 (271)
|.++++|+.|+..+- .-.-+.++.+.+.+.+.|.-|.-+.++.+ .+-. ...+.....|...-++|+|..
T Consensus 11 ~~~~iLii~gsP~~~~s~~s~~~~l~~~~~~~~~~~g~~v~~~dL~~~-----~d~~-~~~~~l~~AD~iV~~~P~y~~ 83 (204)
T 2amj_A 11 GSSNILIINGAKKFAHSNGQLNDTLTEVADGTLRDLGHDVRIVRADSD-----YDVK-AEVQNFLWADVVIWQMPGWWM 83 (204)
T ss_dssp -CCEEEEEECCC------CHHHHHHHHHHHHHHHHTTCEEEEEESSSC-----CCHH-HHHHHHHHCSEEEEEEECBTT
T ss_pred CCcCEEEEEcCCCcccCcCcHHHHHHHHHHHHHHHcCCEEEEEeCCcc-----ccHH-HHHHHHHhCCEEEEECCcccc
Confidence 678888888887732 12223456778888888887777777531 1212 222334556778999999863
No 56
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=31.94 E-value=1.6e+02 Score=23.25 Aligned_cols=53 Identities=11% Similarity=0.220 Sum_probs=37.2
Q ss_pred cCCceeehhhh-cCcceEEEEe--CC-HhHHHH-HHhhchhhHHHHhhcCc-EEEEEeeC
Q 024212 181 DEKKIISVNNL-RGIARLVICS--GP-ASYIME-SFKRSEPFTESLLERGV-LVVSFTTD 234 (271)
Q Consensus 181 ~~~r~v~L~~L-Rg~aRvVIvA--G~-~e~V~~-al~~Ae~~~~~L~~rgV-LVVPV~~d 234 (271)
.+|+.++|+++ +|.. +||.- ++ -..+.. -+..-+.+.+++.+.|| -||-|..|
T Consensus 18 ~~G~~v~L~d~~~Gk~-vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d 76 (167)
T 2wfc_A 18 TPNDKVNMAELFAGKK-GVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGKGVDIIACMAVN 76 (167)
T ss_dssp STTCEEEHHHHTTTSE-EEEEEESCTTCHHHHHTHHHHHHHTHHHHHHTTCCEEEEEESS
T ss_pred CCCcEEeHHHHhCCCc-EEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 45799999999 8853 44432 32 235555 56666667788889999 99999875
No 57
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=31.64 E-value=81 Score=24.33 Aligned_cols=52 Identities=13% Similarity=0.249 Sum_probs=36.6
Q ss_pred CC--ceeehhh-hcCcceEEEEeCCH---hHHH-HHHhhchhhHHHHhhcCcE-EEEEeeC
Q 024212 182 EK--KIISVNN-LRGIARLVICSGPA---SYIM-ESFKRSEPFTESLLERGVL-VVSFTTD 234 (271)
Q Consensus 182 ~~--r~v~L~~-LRg~aRvVIvAG~~---e~V~-~al~~Ae~~~~~L~~rgVL-VVPV~~d 234 (271)
+| +.++|++ ++|.. +||.-.++ ..+. .-+..-+.+.+++.+.||- ||-|..|
T Consensus 21 ~G~~~~~~l~~~~~gk~-vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~~v~~vv~Is~d 80 (162)
T 1tp9_A 21 QDQLQEVSVHSLVAGKK-VILFGVPGAFTPTCSLKHVPGFIEKAGELKSKGVTEILCISVN 80 (162)
T ss_dssp TSCEEEEESHHHHTTSE-EEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCCEEEEESS
T ss_pred CCCceeEeHHHHhCCCc-EEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECC
Confidence 57 8999999 89864 44444433 4555 4555556677788889999 9998875
No 58
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=31.59 E-value=51 Score=24.28 Aligned_cols=62 Identities=15% Similarity=0.150 Sum_probs=39.4
Q ss_pred cceeEecCCceeehhhhcCcceEEEEeCC-HhHHHHHHhhchhhHHHHhhcCcEEEEEeeCCC
Q 024212 175 NLKLRVDEKKIISVNNLRGIARLVICSGP-ASYIMESFKRSEPFTESLLERGVLVVSFTTDGN 236 (271)
Q Consensus 175 rL~Vrl~~~r~v~L~~LRg~aRvVIvAG~-~e~V~~al~~Ae~~~~~L~~rgVLVVPV~~dg~ 236 (271)
.+.+.--+|+.+++.+++|..-+|...++ =.++...+..-+.+.+.+.+.+|.||-|..|.+
T Consensus 12 ~f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~ 74 (152)
T 2lja_A 12 SFSYPDINGKTVSLADLKGKYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDKN 74 (152)
T ss_dssp SCEEEETTTEEEESTTTTTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCSC
T ss_pred ccEeecCCCCEeeHHHcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccCc
Confidence 45555556899999999886554444432 122333333344556666778899999988654
No 59
>3umf_A Adenylate kinase; rossmann fold, transferase; 2.05A {Schistosoma mansoni}
Probab=31.30 E-value=13 Score=32.01 Aligned_cols=13 Identities=46% Similarity=0.933 Sum_probs=11.2
Q ss_pred eeeecccCCCCcc
Q 024212 8 SYILGPVGSGRGY 20 (271)
Q Consensus 8 ~~~~~~~~~~~~~ 20 (271)
-.|+||+|||.|.
T Consensus 32 I~llGpPGsGKgT 44 (217)
T 3umf_A 32 IFVLGGPGSGKGT 44 (217)
T ss_dssp EEEECCTTCCHHH
T ss_pred EEEECCCCCCHHH
Confidence 3689999999985
No 60
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=31.04 E-value=1.1e+02 Score=25.68 Aligned_cols=59 Identities=14% Similarity=0.247 Sum_probs=42.7
Q ss_pred ceeEecCCceeehhhhcCcceEEEEeCCHh---HHHHHHhhchhhHHHHhhcCcEEEEEeeCC
Q 024212 176 LKLRVDEKKIISVNNLRGIARLVICSGPAS---YIMESFKRSEPFTESLLERGVLVVSFTTDG 235 (271)
Q Consensus 176 L~Vrl~~~r~v~L~~LRg~aRvVIvAG~~e---~V~~al~~Ae~~~~~L~~rgVLVVPV~~dg 235 (271)
..+.--+| .++|.+++|...+|++-=++. .+..-+..-..+.+++.++||-||-|..|.
T Consensus 14 F~l~~~~G-~v~l~d~~Gk~~vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~IS~D~ 75 (224)
T 1prx_A 14 FEANTTVG-RIRFHDFLGDSWGILFSHPRDFTPVCTTELGRAAKLAPEFAKRNVKLIALSIDS 75 (224)
T ss_dssp CEEEETTE-EEEHHHHHTTSEEEEEEESCSSCHHHHHHHHHHHHHHHHHHTTTEEEEEEESSC
T ss_pred cEEecCCC-CEEHHHHcCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEcCCC
Confidence 33433456 899999999755666653333 566667777778889999999999998853
No 61
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=30.60 E-value=73 Score=26.05 Aligned_cols=67 Identities=10% Similarity=0.192 Sum_probs=45.6
Q ss_pred hhhhcccceeEecCCceeehhhhcCcc-eEEEEeCC-HhHHHHHHhhchhhHHHHhhcCcEEEEEeeCC
Q 024212 169 REESLSNLKLRVDEKKIISVNNLRGIA-RLVICSGP-ASYIMESFKRSEPFTESLLERGVLVVSFTTDG 235 (271)
Q Consensus 169 REe~L~rL~Vrl~~~r~v~L~~LRg~a-RvVIvAG~-~e~V~~al~~Ae~~~~~L~~rgVLVVPV~~dg 235 (271)
-++.+-.+.+.-.+|+.++|.+++|.. -+|....+ =..+...+..-+.+.+++.+.||.||-|..|.
T Consensus 34 ~G~~aP~f~l~~~~G~~v~l~~~~gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~ 102 (218)
T 3u5r_E 34 LGTRAADFVLPDAGGNLFTLAEFKDSPALLVAFISNRCPFVVLIREALAKFAGDYAGQGLAVVAINSND 102 (218)
T ss_dssp TTCBCCCCCEECTTCCEECGGGGTTCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEECSC
T ss_pred CCCcCCCcEeECCCCCEEeHHHhCCCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCc
Confidence 344455555555678999999999974 33333222 23455566666777888888999999998863
No 62
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=30.20 E-value=82 Score=26.45 Aligned_cols=58 Identities=16% Similarity=0.277 Sum_probs=37.6
Q ss_pred cccceeEecC-CceeehhhhcCcceEEEE----eCCHhHHHHHHhhchhhHHHHhhcCcEEEEEeeC
Q 024212 173 LSNLKLRVDE-KKIISVNNLRGIARLVIC----SGPASYIMESFKRSEPFTESLLERGVLVVSFTTD 234 (271)
Q Consensus 173 L~rL~Vrl~~-~r~v~L~~LRg~aRvVIv----AG~~e~V~~al~~Ae~~~~~L~~rgVLVVPV~~d 234 (271)
+-.+.+.-.+ |+.++|++|||..-||.. +|+ +. -+..-+.+.+++.+.|+.||-|..|
T Consensus 35 ~pdF~l~d~~~G~~v~Lsd~~GKvvll~FwAt~C~~---c~-e~p~L~~l~~~~~~~g~~Vlgvs~d 97 (215)
T 2i3y_A 35 IYDYEAIALNKNEYVSFKQYVGKHILFVNVATYCGL---TA-QYPELNALQEELKPYGLVVLGFPCN 97 (215)
T ss_dssp GGGCEEEBSSSSCEEEGGGGTTSEEEEEEECSSSGG---GG-GHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred cCCcEeeeCCCCCEEcHHHhCCCEEEEEEeCCCCCC---hH-hHHHHHHHHHHhccCCeEEEEEEcc
Confidence 3344554456 899999999996322222 233 22 2444466777888899999999864
No 63
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=28.72 E-value=1.8e+02 Score=21.46 Aligned_cols=54 Identities=15% Similarity=0.129 Sum_probs=39.0
Q ss_pred cCCceeehhhhcCcceEEEEeCC-HhHHHH-HHhhchhhHHHHhhcCcEEEEEeeC
Q 024212 181 DEKKIISVNNLRGIARLVICSGP-ASYIME-SFKRSEPFTESLLERGVLVVSFTTD 234 (271)
Q Consensus 181 ~~~r~v~L~~LRg~aRvVIvAG~-~e~V~~-al~~Ae~~~~~L~~rgVLVVPV~~d 234 (271)
-+|+.++|++++|..-+|....+ =..+.. .+..-+.+.+.+.+.||.||-|..+
T Consensus 18 ~~g~~~~l~~~~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~ 73 (160)
T 3lor_A 18 VNHEGLSNEDLRGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSV 73 (160)
T ss_dssp SSSCCCCHHHHTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECC
T ss_pred cCCCccCHHHhCCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEecc
Confidence 45799999999986544433333 345555 5666677788888889999999886
No 64
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=28.06 E-value=1.9e+02 Score=21.61 Aligned_cols=61 Identities=15% Similarity=0.077 Sum_probs=40.3
Q ss_pred ceeEecCCceeehhhhcCcceEEEEeCCH-h-HHHHHHhhchhhHHHHhh----cCcEEEEEeeCCC
Q 024212 176 LKLRVDEKKIISVNNLRGIARLVICSGPA-S-YIMESFKRSEPFTESLLE----RGVLVVSFTTDGN 236 (271)
Q Consensus 176 L~Vrl~~~r~v~L~~LRg~aRvVIvAG~~-e-~V~~al~~Ae~~~~~L~~----rgVLVVPV~~dg~ 236 (271)
..+.-.+|+.+++.+++|..-+|...++- . .+...+..-+.+.+.+.+ .+|-||-|..|.+
T Consensus 9 f~l~~~~G~~~~l~~~~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~ 75 (171)
T 2rli_A 9 FHLLDHRGRARCKADFRGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPE 75 (171)
T ss_dssp CEEEETTSCEEETTTTTTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCST
T ss_pred eEEEeCCCCEEeHHHhCCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCC
Confidence 33433568999999999854333333322 2 266666666667777765 5899999988743
No 65
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=27.91 E-value=99 Score=25.18 Aligned_cols=52 Identities=15% Similarity=0.263 Sum_probs=36.3
Q ss_pred CC-ceeehhh-hcCcceEEEEe--CC-HhHHHH-HHhhchhhHHHHhhcCcE-EEEEeeC
Q 024212 182 EK-KIISVNN-LRGIARLVICS--GP-ASYIME-SFKRSEPFTESLLERGVL-VVSFTTD 234 (271)
Q Consensus 182 ~~-r~v~L~~-LRg~aRvVIvA--G~-~e~V~~-al~~Ae~~~~~L~~rgVL-VVPV~~d 234 (271)
+| +.++|++ ++|. .|||+- ++ -..+.. =+..-+.+.+++.++||- ||-|..|
T Consensus 43 ~G~~~v~L~d~~~Gk-~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d 101 (184)
T 3uma_A 43 DGPVEVTTELLFKGK-RVVLFAVPGAFTPTCSLNHLPGYLENRDAILARGVDDIAVVAVN 101 (184)
T ss_dssp TEEEEEEHHHHHTTS-EEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESS
T ss_pred CCceEEeHHHHhCCC-CEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcCCCEEEEEECC
Confidence 67 8999999 7885 344443 22 235555 355556667888999998 9988875
No 66
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=27.18 E-value=78 Score=26.11 Aligned_cols=53 Identities=21% Similarity=0.178 Sum_probs=37.7
Q ss_pred CCceeehhhhcCcceEEEEeCCH---hHHHHHHhhchhhHHHHhhcCcEEEEEeeCC
Q 024212 182 EKKIISVNNLRGIARLVICSGPA---SYIMESFKRSEPFTESLLERGVLVVSFTTDG 235 (271)
Q Consensus 182 ~~r~v~L~~LRg~aRvVIvAG~~---e~V~~al~~Ae~~~~~L~~rgVLVVPV~~dg 235 (271)
+++.++|.+++|. -+||.-.++ ..+...+..-+.+.+++.++||-||-|..|.
T Consensus 45 ~g~~v~l~d~~Gk-~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~ 100 (220)
T 1zye_A 45 EFKEISLDDFKGK-YLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVDS 100 (220)
T ss_dssp SEEEEEGGGGTTS-EEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEEEEESSC
T ss_pred CCcEEEHHHhCCC-eEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 4699999999993 344443322 3455566666667788888999999998863
No 67
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=26.26 E-value=1.2e+02 Score=23.15 Aligned_cols=54 Identities=9% Similarity=0.167 Sum_probs=31.9
Q ss_pred eeEecCCceeehhhhcCcceEEEEeCC---HhHHHHHHhhchhhHHHHhhcCcEEEEEeeC
Q 024212 177 KLRVDEKKIISVNNLRGIARLVICSGP---ASYIMESFKRSEPFTESLLERGVLVVSFTTD 234 (271)
Q Consensus 177 ~Vrl~~~r~v~L~~LRg~aRvVIvAG~---~e~V~~al~~Ae~~~~~L~~rgVLVVPV~~d 234 (271)
.+.-.+|+.++|++|+|.. +||.-.+ -..+...+..-+.+.++ .|+.||-|..|
T Consensus 30 ~l~~~~G~~~~l~~~~Gk~-vvl~f~~~~~c~~C~~~~~~l~~~~~~---~~~~vv~is~d 86 (166)
T 3p7x_A 30 TVLDNDLNQVTLADYAGKK-KLISVVPSIDTGVCDQQTRKFNSDASK---EEGIVLTISAD 86 (166)
T ss_dssp EEECTTSCEEEGGGGTTSC-EEEEECSCTTSHHHHHHHHHHHHHSCT---TTSEEEEEESS
T ss_pred EEEcCCCCEEeHHHhCCCc-EEEEEECCCCCCccHHHHHHHHHHhhc---CCCEEEEEECC
Confidence 3333468999999999964 3333332 34455444433333222 78988888764
No 68
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=25.61 E-value=1.3e+02 Score=24.54 Aligned_cols=61 Identities=18% Similarity=0.298 Sum_probs=38.9
Q ss_pred ccceeEecC-CceeehhhhcCcceEEEEeCC-HhHHHHHHhhchhhHHHHhhcCcEEEEEeeC
Q 024212 174 SNLKLRVDE-KKIISVNNLRGIARLVICSGP-ASYIMESFKRSEPFTESLLERGVLVVSFTTD 234 (271)
Q Consensus 174 ~rL~Vrl~~-~r~v~L~~LRg~aRvVIvAG~-~e~V~~al~~Ae~~~~~L~~rgVLVVPV~~d 234 (271)
-.+.+.--+ |+.++|+++||..-||..-.+ =..+..-+..-+.+.+++.+.|+.||-|..|
T Consensus 27 p~f~l~~~~~G~~v~l~~~~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~g~~vv~v~~d 89 (208)
T 2f8a_A 27 YAFSARPLAGGEPVSLGSLRGKVLLIENVASLGGTTVRDYTQMNELQRRLGPRGLVVLGFPCN 89 (208)
T ss_dssp GGCEECBTTCSSCEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CceEeeeCCCCCCccHHHcCCCEEEEEEECCCCccHHHHHHHHHHHHHHccCCCeEEEEEECC
Confidence 334443345 899999999996433332221 1124444555566777888889999999875
No 69
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=25.43 E-value=2e+02 Score=20.97 Aligned_cols=60 Identities=13% Similarity=0.051 Sum_probs=39.9
Q ss_pred ceeEecCCceeehhhhcCcceEEEEeCC-HhHHHHHHhhchhhHHHHhh-cCcEEEEEeeCC
Q 024212 176 LKLRVDEKKIISVNNLRGIARLVICSGP-ASYIMESFKRSEPFTESLLE-RGVLVVSFTTDG 235 (271)
Q Consensus 176 L~Vrl~~~r~v~L~~LRg~aRvVIvAG~-~e~V~~al~~Ae~~~~~L~~-rgVLVVPV~~dg 235 (271)
+.+.-.+|+.+++.+++|..-+|....+ =..+...+..-+.+.+.+.+ .++.||-|..|.
T Consensus 11 f~l~~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~ 72 (144)
T 1i5g_A 11 TNVLKGAAADIALPSLAGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDE 72 (144)
T ss_dssp SEEEETTEEEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCS
T ss_pred eEEEcCCCCEecHHHcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCC
Confidence 4454456899999999986544444443 23455555555666667764 689999998864
No 70
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=25.28 E-value=1.7e+02 Score=24.78 Aligned_cols=54 Identities=17% Similarity=0.236 Sum_probs=40.4
Q ss_pred cCCceeehhhhcCcceEEEEeCCHh---HHHHHHhhchhhHHHHhhcCcEEEEEeeCC
Q 024212 181 DEKKIISVNNLRGIARLVICSGPAS---YIMESFKRSEPFTESLLERGVLVVSFTTDG 235 (271)
Q Consensus 181 ~~~r~v~L~~LRg~aRvVIvAG~~e---~V~~al~~Ae~~~~~L~~rgVLVVPV~~dg 235 (271)
.+| .++|.+++|..-+|+.-=++. .+..-+..-..+.+++.++||-||-|..|.
T Consensus 17 ~~G-~v~l~d~~Gk~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~~v~vigIS~D~ 73 (233)
T 2v2g_A 17 TIG-KLKFHDWLGNSWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKRGVKLIALSCDN 73 (233)
T ss_dssp TTC-CEEHHHHHCSSEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSC
T ss_pred CCC-CEEHHHHCCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHcCCEEEEEcCCC
Confidence 346 899999999755555553333 566667777778888999999999998863
No 71
>2qjy_C Ubiquinol-cytochrome C reductase iron-sulfur SUBU; cytochrome B, 8 TM helixces cytochrome C1, 1 C-TERM TM helix 1 N-TERM TM helix; HET: BGL HEM SMA LOP UQ2; 2.40A {Rhodobacter sphaeroides} PDB: 2fyn_C* 2qjk_C* 2qjp_C* 1zrt_E* 2yiu_C*
Probab=23.30 E-value=1e+02 Score=25.83 Aligned_cols=29 Identities=28% Similarity=0.419 Sum_probs=22.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 024212 95 SVRMFFYLAFVASGSLGGLIAITQLIGAL 123 (271)
Q Consensus 95 ~lR~Ffy~Af~ASA~IG~~i~l~rliaal 123 (271)
+=|.|+|.+.++.+++|+..++.-++..+
T Consensus 10 ~RR~Fl~~~~~~~~~~~a~~~~~p~v~~~ 38 (187)
T 2qjy_C 10 TRRDFLYYATAGAGAVATGAAVWPLINQM 38 (187)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 45899999988888888777777676654
No 72
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=23.06 E-value=86 Score=24.69 Aligned_cols=52 Identities=13% Similarity=0.144 Sum_probs=35.9
Q ss_pred CC--ceeehhhh-cCcceEEEEeCCH---hHHHHHHhhchhhHHHHhhcCcEEEEEeeC
Q 024212 182 EK--KIISVNNL-RGIARLVICSGPA---SYIMESFKRSEPFTESLLERGVLVVSFTTD 234 (271)
Q Consensus 182 ~~--r~v~L~~L-Rg~aRvVIvAG~~---e~V~~al~~Ae~~~~~L~~rgVLVVPV~~d 234 (271)
+| +.++|.++ +|.. +||.-.++ ..+...+..-+.+.+++.+.||-||-|..|
T Consensus 17 ~G~~~~~~l~~~~~gk~-vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~Is~d 74 (192)
T 2h01_A 17 DNTFGEVSLSDFIGKKY-VLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELLGCSVD 74 (192)
T ss_dssp TSCEEEEEGGGGTTTCE-EEEEECSCSSCSSCCHHHHHHHHTHHHHHHTTEEEEEEESS
T ss_pred CCceeEEeHHHHcCCCe-EEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeC
Confidence 67 89999999 8853 34443322 234444555556677788899999999886
No 73
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=21.86 E-value=91 Score=25.36 Aligned_cols=56 Identities=11% Similarity=0.230 Sum_probs=34.8
Q ss_pred eeEecCCceeehhhhcCcceEEEEe-C-CHhHHHHHHhhchhhHHHHhhcCcEEEEEeeC
Q 024212 177 KLRVDEKKIISVNNLRGIARLVICS-G-PASYIMESFKRSEPFTESLLERGVLVVSFTTD 234 (271)
Q Consensus 177 ~Vrl~~~r~v~L~~LRg~aRvVIvA-G-~~e~V~~al~~Ae~~~~~L~~rgVLVVPV~~d 234 (271)
.+.-.+|+.++|++++|..-++... + --..+...+..-+.+.+++ .||.||-|..|
T Consensus 62 ~l~d~~G~~v~L~d~~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~--~~v~vv~Is~D 119 (200)
T 3zrd_A 62 TLVAKDLSDVALSSFAGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL--ENTVVLCISSD 119 (200)
T ss_dssp EEECTTSCEEEGGGGTTSEEEEEECSCCCCSCCCHHHHHHHHHHHTS--TTEEEEEEESS
T ss_pred EEECCCCCEEcHHHhCCCcEEEEEECCCCCchhHHHHHHHHHHHHHh--CCCEEEEEECC
Confidence 3333468999999999964333332 2 2334555555555555566 68999988875
No 74
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=20.93 E-value=1.3e+02 Score=23.15 Aligned_cols=57 Identities=12% Similarity=0.159 Sum_probs=34.9
Q ss_pred ceeEecCCceeehhhhcCcceEEEEe-C-CHhHHHHHHhhchhhHHHHhhcCcEEEEEeeC
Q 024212 176 LKLRVDEKKIISVNNLRGIARLVICS-G-PASYIMESFKRSEPFTESLLERGVLVVSFTTD 234 (271)
Q Consensus 176 L~Vrl~~~r~v~L~~LRg~aRvVIvA-G-~~e~V~~al~~Ae~~~~~L~~rgVLVVPV~~d 234 (271)
..+.-.+|+.+++.+++|..-++... + .-..+...+..-+.+.+++ .+|-||-|..|
T Consensus 30 f~l~~~~G~~~~l~~~~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~--~~v~vv~Is~d 88 (171)
T 2yzh_A 30 AVVVTKDLQEKIVGGAKDVVQVIITVPSLDTPVCETETKKFNEIMAGM--EGVDVTVVSMD 88 (171)
T ss_dssp EEEEETTSCEEEESSCCSSEEEEEECSCTTSHHHHHHHHHHHHHTTTC--TTEEEEEEESS
T ss_pred eEEECCCCCEeeHHHhCCCeEEEEEECCCCCCchHHHHHHHHHHHHHc--CCceEEEEeCC
Confidence 33333468999999999864333332 2 2334555555444444455 68888888775
No 75
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=20.65 E-value=1.8e+02 Score=22.13 Aligned_cols=56 Identities=16% Similarity=0.215 Sum_probs=34.5
Q ss_pred ceeEecCCceeehhhhcCcceEEEEeCC---HhHHHHHHhhchhhHHHHhhcCcEEEEEeeC
Q 024212 176 LKLRVDEKKIISVNNLRGIARLVICSGP---ASYIMESFKRSEPFTESLLERGVLVVSFTTD 234 (271)
Q Consensus 176 L~Vrl~~~r~v~L~~LRg~aRvVIvAG~---~e~V~~al~~Ae~~~~~L~~rgVLVVPV~~d 234 (271)
..+.-.+|+.++|++++|.. +||.-.+ -..+...+..-+.+.+++ .||-||-|..|
T Consensus 25 f~l~~~~G~~v~l~~~~gk~-vvl~F~~~~~c~~C~~~~~~l~~~~~~~--~~v~vv~is~d 83 (163)
T 1psq_A 25 FSLTTTDLSKKSLADFDGKK-KVLSVVPSIDTGICSTQTRRFNEELAGL--DNTVVLTVSMD 83 (163)
T ss_dssp CEEECTTSCEEEGGGGTTSE-EEEEECSCTTSHHHHHHHHHHHHHTTTC--TTEEEEEEESS
T ss_pred EEEEcCCCcEeeHHHhCCCE-EEEEEECCCCCCccHHHHHHHHHHHHHc--CCcEEEEEECC
Confidence 33333468999999999964 3343332 234555555444444455 68999988875
No 76
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=20.47 E-value=96 Score=26.87 Aligned_cols=53 Identities=17% Similarity=0.148 Sum_probs=38.6
Q ss_pred CCceeehhhhcCcceEEEEeCCHhH---HHHHHhhchhhHHHHhhcCcEEEEEeeCC
Q 024212 182 EKKIISVNNLRGIARLVICSGPASY---IMESFKRSEPFTESLLERGVLVVSFTTDG 235 (271)
Q Consensus 182 ~~r~v~L~~LRg~aRvVIvAG~~e~---V~~al~~Ae~~~~~L~~rgVLVVPV~~dg 235 (271)
+++.++|+++||. .||+.-=|+++ +..-+..-....++|.++|+.|+-|..|.
T Consensus 45 ~g~~vsLsd~~GK-~vVL~FyP~d~TpvCt~E~~~f~~~~~eF~~~g~~vigiS~Ds 100 (219)
T 3tue_A 45 SFKKISLSSYKGK-WVVLFFYPLDFTFVCPTEVIAFSDSVSRFNELNCEVLACSIDS 100 (219)
T ss_dssp CEEEEEGGGGTTS-EEEEEECSCTTCSSCCHHHHHHHTTHHHHHTTTEEEEEEESSC
T ss_pred CCcEEehHHhCCC-EEEEEEecccCCCCCchhHhhHHHHHhhhccCCcEEEEeeCCc
Confidence 3588999999995 46666655544 23334445566788999999999999854
No 77
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=20.45 E-value=2.9e+02 Score=21.13 Aligned_cols=59 Identities=15% Similarity=0.139 Sum_probs=40.0
Q ss_pred eeEecCCceeehhhhcCcceEEEEeCC-HhHHHHHHhhchhhHHHHhh-cCcEEEEEeeCCC
Q 024212 177 KLRVDEKKIISVNNLRGIARLVICSGP-ASYIMESFKRSEPFTESLLE-RGVLVVSFTTDGN 236 (271)
Q Consensus 177 ~Vrl~~~r~v~L~~LRg~aRvVIvAG~-~e~V~~al~~Ae~~~~~L~~-rgVLVVPV~~dg~ 236 (271)
.+.-.+| .++|.+++|..=+|...++ =..+...+..-+.+.+.+.+ .+|.||-|..|..
T Consensus 33 ~l~~~~g-~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~ 93 (165)
T 3s9f_A 33 KLRKQAD-TADMDSLSGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEE 93 (165)
T ss_dssp CEEETTE-EECSGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCS
T ss_pred eeecCCC-cccHHHcCCCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCC
Confidence 4555567 9999999986544433333 24566666666677777776 6899999988643
No 78
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=20.13 E-value=1.8e+02 Score=22.65 Aligned_cols=51 Identities=20% Similarity=0.180 Sum_probs=34.1
Q ss_pred eeehhhhcCcceEEEEe-CC-HhHHHHHHhhchhhHHHHhhcCcEEEEEeeCC
Q 024212 185 IISVNNLRGIARLVICS-GP-ASYIMESFKRSEPFTESLLERGVLVVSFTTDG 235 (271)
Q Consensus 185 ~v~L~~LRg~aRvVIvA-G~-~e~V~~al~~Ae~~~~~L~~rgVLVVPV~~dg 235 (271)
.++|.+++|..-++... ++ =..+...+..-+.+.+++.+.||-||-|..|.
T Consensus 23 ~~~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~ 75 (187)
T 1we0_A 23 EVTEADLKGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVSTDT 75 (187)
T ss_dssp EEETTTTSSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTTEEEEEEESSC
T ss_pred EecHHHHCCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEEECCC
Confidence 99999999843333322 11 12445555555667777888899999998864
Done!