BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024217
(270 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1
Length = 316
Score = 159 bits (402), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 89/191 (46%), Positives = 109/191 (57%), Gaps = 8/191 (4%)
Query: 84 HGTMSVIGRRKEMEDAVRVELGCMXXXXXXXXXXXXXXXQKKYDFFGVYDGHGGARVAEA 143
+G S+ GRR EMEDAV + Q FFGVYDGHGG++VA
Sbjct: 11 YGFTSICGRRPEMEDAVST-IPRFLQSSSGSMLDGRFDPQSAAHFFGVYDGHGGSQVANY 69
Query: 144 CKERMHEVLVEVIAGEEY----GEKNIE-WERVMEGCFGKMDEEVNRGRLREEMVGSTXX 198
C+ERMH L E IA E+ G+ +E W++ + F ++D E+ + E VGST
Sbjct: 70 CRERMHLALAEEIAKEKPMLSDGDTWLEKWKKALFNSFLRVDSEIES--VAPETVGSTSV 127
Query: 199 XXXXXXXXXXXXNCGDSRAVLSRGGVVVPLSVDHKPDRHDELIRVEAAGGRVINWNGPRI 258
NCGDSRAVL RG +PLSVDHKPDR DE R+EAAGG+VI WNG R+
Sbjct: 128 VAVVFPSHIFVANCGDSRAVLCRGKTALPLSVDHKPDREDEAARIEAAGGKVIQWNGARV 187
Query: 259 LGVLATSRSIG 269
GVLA SRSIG
Sbjct: 188 FGVLAMSRSIG 198
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl1 In Complex With Type 2c Protein
Phosphatase Abi1
pdb|3NMN|D Chain D, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl1 In Complex With Type 2c Protein
Phosphatase Abi1
Length = 319
Score = 159 bits (401), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 89/191 (46%), Positives = 109/191 (57%), Gaps = 8/191 (4%)
Query: 84 HGTMSVIGRRKEMEDAVRVELGCMXXXXXXXXXXXXXXXQKKYDFFGVYDGHGGARVAEA 143
+G S+ GRR EMEDAV + Q FFGVYDGHGG++VA
Sbjct: 14 YGFTSICGRRPEMEDAVST-IPRFLQSSSGSMLDGRFDPQSAAHFFGVYDGHGGSQVANY 72
Query: 144 CKERMHEVLVEVIAGEEY----GEKNIE-WERVMEGCFGKMDEEVNRGRLREEMVGSTXX 198
C+ERMH L E IA E+ G+ +E W++ + F ++D E+ + E VGST
Sbjct: 73 CRERMHLALAEEIAKEKPMLCDGDTWLEKWKKALFNSFLRVDSEIES--VAPETVGSTSV 130
Query: 199 XXXXXXXXXXXXNCGDSRAVLSRGGVVVPLSVDHKPDRHDELIRVEAAGGRVINWNGPRI 258
NCGDSRAVL RG +PLSVDHKPDR DE R+EAAGG+VI WNG R+
Sbjct: 131 VAVVFPSHIFVANCGDSRAVLCRGKTALPLSVDHKPDREDEAARIEAAGGKVIQWNGARV 190
Query: 259 LGVLATSRSIG 269
GVLA SRSIG
Sbjct: 191 FGVLAMSRSIG 201
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With
Abi1
Length = 326
Score = 158 bits (399), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 89/191 (46%), Positives = 109/191 (57%), Gaps = 8/191 (4%)
Query: 84 HGTMSVIGRRKEMEDAVRVELGCMXXXXXXXXXXXXXXXQKKYDFFGVYDGHGGARVAEA 143
+G S+ GRR EMEDAV + Q FFGVYDGHGG++VA
Sbjct: 26 YGFTSICGRRPEMEDAVST-IPRFLQSSSGSMLDGRFDPQSAAHFFGVYDGHGGSQVANY 84
Query: 144 CKERMHEVLVEVIAGEEY----GEKNIE-WERVMEGCFGKMDEEVNRGRLREEMVGSTXX 198
C+ERMH L E IA E+ G+ +E W++ + F ++D E+ + E VGST
Sbjct: 85 CRERMHLALAEEIAKEKPMLCDGDTWLEKWKKALFNSFLRVDSEIES--VAPETVGSTSV 142
Query: 199 XXXXXXXXXXXXNCGDSRAVLSRGGVVVPLSVDHKPDRHDELIRVEAAGGRVINWNGPRI 258
NCGDSRAVL RG +PLSVDHKPDR DE R+EAAGG+VI WNG R+
Sbjct: 143 VAVVFPSHIFVANCGDSRAVLCRGKTALPLSVDHKPDREDEAARIEAAGGKVIQWNGARV 202
Query: 259 LGVLATSRSIG 269
GVLA SRSIG
Sbjct: 203 FGVLAMSRSIG 213
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Abi2
pdb|3UJK|A Chain A, Crystal Structure Of Protein Phosphatase Abi2
pdb|3UJL|B Chain B, Crystal Structure Of Abscisic Acid Bound Pyl2 In Complex
With Type 2c Protein Phosphatase Abi2
Length = 324
Score = 149 bits (375), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/197 (43%), Positives = 104/197 (52%), Gaps = 14/197 (7%)
Query: 84 HGTMSVIGRRKEMEDAVRV---ELGCMXXXXXXXXXXXXXXXQKKYDFFGVYDGHGGARV 140
+G S+ GRR EMED+V L FFGVYDGHGG++V
Sbjct: 14 YGVTSICGRRPEMEDSVSTIPRFLQVSSSSLLDGRVTNGFNPHLSAHFFGVYDGHGGSQV 73
Query: 141 AEACKERMHEVLVEVIA--------GEEYGEKNIEWERVMEGCFGKMDEEVNRGRLREEM 192
A C+ERMH L E I G+ + EK W++ + F ++D E+ E
Sbjct: 74 ANYCRERMHLALTEEIVKEKPEFCDGDTWQEK---WKKALFNSFMRVDSEIETVAHAPET 130
Query: 193 VGSTXXXXXXXXXXXXXXNCGDSRAVLSRGGVVVPLSVDHKPDRHDELIRVEAAGGRVIN 252
VGST NCGDSRAVL RG + LSVDHKPDR DE R+EAAGG+VI
Sbjct: 131 VGSTSVVAVVFPTHIFVANCGDSRAVLCRGKTPLALSVDHKPDRDDEAARIEAAGGKVIR 190
Query: 253 WNGPRILGVLATSRSIG 269
WNG R+ GVLA SRSIG
Sbjct: 191 WNGARVFGVLAMSRSIG 207
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of
Abscisic Acid (Aba)
pdb|3RT0|B Chain B, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of
Abscisic Acid (Aba)
Length = 340
Score = 140 bits (354), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 108/211 (51%), Gaps = 26/211 (12%)
Query: 85 GTMSVIGRRKEMEDAVRVELGCMXXXXXXXXX----XXXXXXQKKYDFFGVYDGHGGARV 140
GT+S+ G R EMEDA V + FFGVYDGHGG +V
Sbjct: 20 GTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGGHKV 79
Query: 141 AEACKERMHEVLVEVI--AGEEYGEKN------IEWERVMEGCFGKMDEEV--NRGR--- 187
A+ C++R+H L E I +E ++N ++W++V CF +D E+ GR
Sbjct: 80 ADYCRDRLHFALAEEIERIKDELSKRNTGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAVV 139
Query: 188 ---------LREEMVGSTXXXXXXXXXXXXXXNCGDSRAVLSRGGVVVPLSVDHKPDRHD 238
+ E VGST NCGDSRAVL RG +PLSVDHKPDR D
Sbjct: 140 GSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPDRED 199
Query: 239 ELIRVEAAGGRVINWNGPRILGVLATSRSIG 269
E R+E AGG+VI W G R+ GVLA SRSIG
Sbjct: 200 EYARIENAGGKVIQWQGARVFGVLAMSRSIG 230
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor
Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+
Length = 343
Score = 140 bits (354), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 91/232 (39%), Positives = 116/232 (50%), Gaps = 27/232 (11%)
Query: 65 ENYDVLEKKARTNTVTCLS-HGTMSVIGRRKEMEDAVRVELGCMXXXXXXXX----XXXX 119
EN + L K + C+ GT+S+ G R EMEDA V +
Sbjct: 2 ENSNHLVKGRSVYELDCIPLWGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSP 61
Query: 120 XXXQKKYDFFGVYDGHGGARVAEACKERMHEVLVEVI--AGEEYGEKN------IEWERV 171
FFGVYDGHGG +VA+ C++R+H L E I +E ++N ++W++V
Sbjct: 62 SLTHLTGHFFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKV 121
Query: 172 MEGCFGKMDEEV--NRGR------------LREEMVGSTXXXXXXXXXXXXXXNCGDSRA 217
CF +D E+ GR + E VGST NCGDSRA
Sbjct: 122 FTSCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRA 181
Query: 218 VLSRGGVVVPLSVDHKPDRHDELIRVEAAGGRVINWNGPRILGVLATSRSIG 269
VL RG +PLSVDHKPDR DE R+E AGG+VI W G R+ GVLA SRSIG
Sbjct: 182 VLFRGKEAMPLSVDHKPDREDEYARIENAGGKVIQWQGARVFGVLAMSRSIG 233
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 350
Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 108/211 (51%), Gaps = 26/211 (12%)
Query: 85 GTMSVIGRRKEMEDAVRVELGCMXXXXXXXXX----XXXXXXQKKYDFFGVYDGHGGARV 140
GT+S+ G R EMEDA V + FFGVYDGHGG +V
Sbjct: 30 GTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGGHKV 89
Query: 141 AEACKERMHEVLVEVI--AGEEYGEKN------IEWERVMEGCFGKMDEEV--NRGR--- 187
A+ C++R+H L E I +E ++N ++W++V CF +D E+ GR
Sbjct: 90 ADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAVV 149
Query: 188 ---------LREEMVGSTXXXXXXXXXXXXXXNCGDSRAVLSRGGVVVPLSVDHKPDRHD 238
+ E VGST NCGDSRAVL RG +PLSVDHKPDR D
Sbjct: 150 GSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPDRED 209
Query: 239 ELIRVEAAGGRVINWNGPRILGVLATSRSIG 269
E R+E AGG+VI W G R+ GVLA SRSIG
Sbjct: 210 EYARIENAGGKVIQWQGARVFGVLAMSRSIG 240
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In
Complex With The Hab1 Type 2c Phosphatase Catalytic
Domain
pdb|3ZVU|B Chain B, Structure Of The Pyr1 His60pro Mutant In Complex With The
Hab1 Phosphatase And Abscisic Acid
Length = 337
Score = 139 bits (350), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 108/211 (51%), Gaps = 26/211 (12%)
Query: 85 GTMSVIGRRKEMEDAVRVELGCMXXXXXXXXX----XXXXXXQKKYDFFGVYDGHGGARV 140
GT+S+ G R EMEDA V + FFGVYDGHGG +V
Sbjct: 17 GTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGGHKV 76
Query: 141 AEACKERMHEVLVEVI--AGEEYGEKN------IEWERVMEGCFGKMDEEV--NRGR--- 187
A+ C++R+H L E I +E ++N ++W++V CF +D E+ GR
Sbjct: 77 ADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAVV 136
Query: 188 ---------LREEMVGSTXXXXXXXXXXXXXXNCGDSRAVLSRGGVVVPLSVDHKPDRHD 238
+ E VGST NCGDSRAVL RG +PLSVDHKPDR D
Sbjct: 137 GSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPDRED 196
Query: 239 ELIRVEAAGGRVINWNGPRILGVLATSRSIG 269
E R+E AGG+VI W G R+ GVLA SRSIG
Sbjct: 197 EYARIENAGGKVIQWQGARVFGVLAMSRSIG 227
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Hab1
Length = 341
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 108/211 (51%), Gaps = 26/211 (12%)
Query: 85 GTMSVIGRRKEMEDAVRVELGCMXXXXXXXXX----XXXXXXQKKYDFFGVYDGHGGARV 140
GT+S+ G R EMEDA V + FFGVYDGHGG +V
Sbjct: 21 GTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGGHKV 80
Query: 141 AEACKERMHEVLVEVI--AGEEYGEKN------IEWERVMEGCFGKMDEEV--NRGR--- 187
A+ C++R+H L E I +E ++N ++W++V CF +D E+ GR
Sbjct: 81 ADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAVV 140
Query: 188 ---------LREEMVGSTXXXXXXXXXXXXXXNCGDSRAVLSRGGVVVPLSVDHKPDRHD 238
+ E VGST NCGDSRAVL RG +PLSVDHKPDR D
Sbjct: 141 GSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPDRED 200
Query: 239 ELIRVEAAGGRVINWNGPRILGVLATSRSIG 269
E R+E AGG+VI W G R+ GVLA SRSIG
Sbjct: 201 EYARIENAGGKVIQWQGARVFGVLAMSRSIG 231
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex
With Hab1
Length = 321
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 108/211 (51%), Gaps = 26/211 (12%)
Query: 85 GTMSVIGRRKEMEDAVRVELGCMXXXXXXXXX----XXXXXXQKKYDFFGVYDGHGGARV 140
GT+S+ G R EMEDA V + FFGVYDGHGG +V
Sbjct: 6 GTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGGHKV 65
Query: 141 AEACKERMHEVLVEVI--AGEEYGEKN------IEWERVMEGCFGKMDEEV--NRGR--- 187
A+ C++R+H L E I +E ++N ++W++V CF +D E+ GR
Sbjct: 66 ADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAVV 125
Query: 188 ---------LREEMVGSTXXXXXXXXXXXXXXNCGDSRAVLSRGGVVVPLSVDHKPDRHD 238
+ E VGST NCGDSRAVL RG +PLSVDHKPDR D
Sbjct: 126 GSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPDRED 185
Query: 239 ELIRVEAAGGRVINWNGPRILGVLATSRSIG 269
E R+E AGG+VI W G R+ GVLA SRSIG
Sbjct: 186 EYARIENAGGKVIQWQGARVFGVLAMSRSIG 216
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE
Domain Of Human Ppm1b
pdb|2P8E|B Chain B, Crystal Structure Of The SerineTHREONINE PHOSPHATASE
Domain Of Human Ppm1b
Length = 307
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 88/198 (44%), Gaps = 26/198 (13%)
Query: 82 LSHGTMSVIGRRKEMEDAVRVELGCMXXXXXXXXXXXXXXXQKKYDFFGVYDGHGGARVA 141
L +G S+ G R EMEDA +G + + FF VYDGH G+RVA
Sbjct: 24 LRYGLSSMQGWRVEMEDAHTAVVGIPHGL-------------EDWSFFAVYDGHAGSRVA 70
Query: 142 EACKERMHEVLVEV----IAGEEYGEKNIEWERVMEGC---FGKMDEEV-NRGRLREEM- 192
C + E + AG+ + E V G F K+DE + N LR M
Sbjct: 71 NYCSTHLLEHITTNEDFRAAGKSGSALELSVENVKNGIRTGFLKIDEYMRNFSDLRNGMD 130
Query: 193 -VGSTXXXXXXXXXXXXXXNCGDSRAVLSRGGVVVPLSVDHKPDRHDELIRVEAAGGRVI 251
GST NCGDSRAVL R G V + DHKP E R++ AGG V+
Sbjct: 131 RSGSTAVGVMISPKHIYFINCGDSRAVLYRNGQVCFSTQDHKPCNPREKERIQNAGGSVM 190
Query: 252 NWNGPRILGVLATSRSIG 269
R+ G LA SR++G
Sbjct: 191 I---QRVNGSLAVSRALG 205
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE
COMPLEXED With Zn2+
Length = 304
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 75/159 (47%), Gaps = 24/159 (15%)
Query: 128 FFGVYDGHGGARVAEACKERMHEVLVEVIAGEEYGEKNIEWERVMEGCFGKMDEEVNRGR 187
FF VYDGHGGA VA+ C + L V E YG K E+E+ ++ F D + + +
Sbjct: 53 FFAVYDGHGGAEVAQYCSLHLPTFLKTV---EAYGRK--EFEKALKEAFLGFDATLLQEK 107
Query: 188 LREEM-----------------VGSTXXXXXXXXXXXXXXNCGDSRAVLSRGGVVVPLSV 230
+ EE+ G T N GDSR V+ R G + +S
Sbjct: 108 VIEELKVLSGDSAGSDAEPGKDSGCTAVVALLHGKDLYVANAGDSRCVVCRNGKALEMSF 167
Query: 231 DHKPDRHDELIRVEAAGGRVINWNGPRILGVLATSRSIG 269
DHKP+ E R+E AGGRV +G R+ G L SR+IG
Sbjct: 168 DHKPEDTVEYQRIEKAGGRV-TLDG-RVNGGLNLSRAIG 204
>pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid
Dehydrogenase Phosphatase With Mg (Ii) Ions At The
Active Site
Length = 389
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 90/194 (46%), Gaps = 33/194 (17%)
Query: 85 GTMSVIGRRKEMEDAVRVELGCMXXXXXXXXXXXXXXXQKKYDFFGVYDGHGGARVAEAC 144
G S IG+RKE ED R + + +F VYDGHGG A+ C
Sbjct: 125 GCASQIGKRKENED--RFDFAQLTDEVL---------------YFAVYDGHGGPAAADFC 167
Query: 145 KERMHEVLVEVIAGEEYGEKNIEWERVMEGCFGKMDEEVN-RGRLREEMV----GSTXXX 199
M + +++++ E KN+E ++ F ++D+ + RL + G+T
Sbjct: 168 HTHMEKCIMDLLPKE----KNLE--TLLTLAFLEIDKAFSSHARLSADATLLTSGTTATV 221
Query: 200 XXXXX-XXXXXXNCGDSRAVLSRGGVVVPLSVDHKPDRHDELIRVEAAGGRVINWNG--- 255
+ GDSRA+L R G + L++DH P+R DE R++ GG + WN
Sbjct: 222 ALLRDGIELVVASVGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKCGG-FVAWNSLGQ 280
Query: 256 PRILGVLATSRSIG 269
P + G LA +RSIG
Sbjct: 281 PHVNGRLAMTRSIG 294
>pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k
Length = 274
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 90/194 (46%), Gaps = 33/194 (17%)
Query: 85 GTMSVIGRRKEMEDAVRVELGCMXXXXXXXXXXXXXXXQKKYDFFGVYDGHGGARVAEAC 144
G S IG+RKE ED R + + +F VYDGHGG A+ C
Sbjct: 11 GCASQIGKRKENED--RFDFAQLTDEVL---------------YFAVYDGHGGPAAADFC 53
Query: 145 KERMHEVLVEVIAGEEYGEKNIEWERVMEGCFGKMDEEVN-RGRLREEMV----GSTXXX 199
M + +++++ E KN+E ++ F ++D+ + RL + G+T
Sbjct: 54 HTHMEKCIMDLLPKE----KNLE--TLLTLAFLEIDKAFSSHARLSADATLLTSGTTATV 107
Query: 200 XXXXX-XXXXXXNCGDSRAVLSRGGVVVPLSVDHKPDRHDELIRVEAAGGRVINWNG--- 255
+ GDSRA+L R G + L++DH P+R DE R++ GG + WN
Sbjct: 108 ALLRDGIELVVASVGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKCGG-FVAWNSLGQ 166
Query: 256 PRILGVLATSRSIG 269
P + G LA +RSIG
Sbjct: 167 PHVNGRLAMTRSIG 180
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE
PHOSPHATASE 2C AT 2 A Resolution
Length = 382
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 89/198 (44%), Gaps = 31/198 (15%)
Query: 82 LSHGTMSVIGRRKEMEDAVRVELGCMXXXXXXXXXXXXXXXQKKYDFFGVYDGHGGARVA 141
L +G S+ G R EMEDA +G + + FF VYDGH G++VA
Sbjct: 22 LRYGLSSMQGWRVEMEDAHTAVIGLPSGL-------------ESWSFFAVYDGHAGSQVA 68
Query: 142 EACKERMHEVLVEVIAGEEY----GEKNIEWERVMEGC---FGKMDEEV---NRGRLREE 191
+ C E + L + +++ G ++E V G F ++DE + + + +
Sbjct: 69 KYCCEHL---LDHITNNQDFKGSAGAPSVE--NVKNGIRTGFLEIDEHMRVMSEKKHGAD 123
Query: 192 MVGSTXXXXXXXXXXXXXXNCGDSRAVLSRGGVVVPLSVDHKPDRHDELIRVEAAGGRVI 251
GST NCGDSR +L R V + DHKP E R++ AGG V+
Sbjct: 124 RSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGGSVM 183
Query: 252 NWNGPRILGVLATSRSIG 269
R+ G LA SR++G
Sbjct: 184 IQ---RVNGSLAVSRALG 198
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 3 Mm Of Mn2+
pdb|3FXK|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 10 Mm Of Mn2+
pdb|3FXL|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Citrate At 1 Mm Of Mn2+
pdb|3FXM|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Citrate At 10 Mm Of Mn2+
pdb|3FXO|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 1 Mm Of Mn2+
Length = 390
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 89/198 (44%), Gaps = 31/198 (15%)
Query: 82 LSHGTMSVIGRRKEMEDAVRVELGCMXXXXXXXXXXXXXXXQKKYDFFGVYDGHGGARVA 141
L +G S+ G R EMEDA +G + + FF VYDGH G++VA
Sbjct: 22 LRYGLSSMQGWRVEMEDAHTAVIGLPSGL-------------ESWSFFAVYDGHAGSQVA 68
Query: 142 EACKERMHEVLVEVIAGEEY----GEKNIEWERVMEGC---FGKMDEEV---NRGRLREE 191
+ C E + L + +++ G ++E V G F ++DE + + + +
Sbjct: 69 KYCCEHL---LDHITNNQDFKGSAGAPSVE--NVKNGIRTGFLEIDEHMRVMSEKKHGAD 123
Query: 192 MVGSTXXXXXXXXXXXXXXNCGDSRAVLSRGGVVVPLSVDHKPDRHDELIRVEAAGGRVI 251
GST NCGDSR +L R V + DHKP E R++ AGG V+
Sbjct: 124 RSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGGSVM 183
Query: 252 NWNGPRILGVLATSRSIG 269
R+ G LA SR++G
Sbjct: 184 IQ---RVNGSLAVSRALG 198
>pdb|2ISN|A Chain A, Crystal Structure Of A Phosphatase From A Pathogenic
Strain Toxoplasma Gondii
pdb|2ISN|B Chain B, Crystal Structure Of A Phosphatase From A Pathogenic
Strain Toxoplasma Gondii
Length = 364
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 39/61 (63%), Gaps = 3/61 (4%)
Query: 211 NCGDSRAVL--SRGGVVVPLSVDHKPDRHDELIRVEAAGGRVINWNGPRILGVLATSRSI 268
N GDSRA L S GG+ LS DHKP+ E R+E AGG V ++ PR+ GVLA SR+
Sbjct: 179 NIGDSRATLIHSDGGLTR-LSKDHKPNHPTEASRIEKAGGSVETFDVPRVDGVLALSRAF 237
Query: 269 G 269
G
Sbjct: 238 G 238
>pdb|3D8K|A Chain A, Crsytal Structure Of A Phosphatase From A Toxoplasma
Gondii
pdb|3D8K|B Chain B, Crsytal Structure Of A Phosphatase From A Toxoplasma
Gondii
pdb|3D8K|C Chain C, Crsytal Structure Of A Phosphatase From A Toxoplasma
Gondii
pdb|3D8K|D Chain D, Crsytal Structure Of A Phosphatase From A Toxoplasma
Gondii
Length = 377
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 211 NCGDSRAVLSRGGVVVPLSVDHKPDRHDELIRVEAAGGRVINWNGPRIL-GVLATSRSIG 269
+ G+SR VL G + LS H H E RV+AAGG NG +L GV+ +R+ G
Sbjct: 172 SLGNSRCVLKSGRTAIHLSTPHTASSHKERHRVQAAGGVFTTVNGELLLGGVVPXTRAFG 231
>pdb|2I44|A Chain A, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
pdb|2I44|B Chain B, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
pdb|2I44|C Chain C, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
Length = 324
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 57/146 (39%), Gaps = 26/146 (17%)
Query: 128 FFGVYDGHGGARVAEACKERMHEVLVEVIAGEEYGE---KNIEWERVMEGCFGKMDEEVN 184
FFGV+DG G +E K+ + L+ A +E E ++ V E +D+ V+
Sbjct: 55 FFGVFDGTVGDFASENVKDLVVPQLISSPAWQEVTEXLRSDVPATEVDEKLPQLLDQAVD 114
Query: 185 RG-------------RLREEMVGSTXXXXXXXXXXXXXXNCGDSRAVLSRGGVVVP---- 227
+L ++ ST + GDSR GV P
Sbjct: 115 DXYKNADNELVKXCEQLNKDYASSTSVTAVLAKGFVAVGHLGDSRIAX---GVETPNGLN 171
Query: 228 ---LSVDHKPDRHDELIRVEAAGGRV 250
L+VDHKPD E +R+ GG V
Sbjct: 172 CEFLTVDHKPDXPHEKLRIXRNGGSV 197
>pdb|2POP|A Chain A, The Crystal Structure Of Tab1 And Bir1 Complex
pdb|2POP|C Chain C, The Crystal Structure Of Tab1 And Bir1 Complex
Length = 353
Score = 32.7 bits (73), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 54/140 (38%), Gaps = 20/140 (14%)
Query: 128 FFGVYDGHGGARVAEACKERMHEVLVEVIAGEEYGEKNIE--------------WERVME 173
+GV++G+ G RV +R+ L+ E+ E ++ E + +
Sbjct: 66 LYGVFNGYDGNRVTNFVAQRLSAELLLGQLNAEHAEADVRRVLLQAFDVVERSFLESIDD 125
Query: 174 GCFGKMDEEVNRGRLREEMV--GSTXXXXXXXXXXXXXXNCGDSRAVLSRGGV----VVP 227
K ++ R + E + G+ N G +RA+L + V V
Sbjct: 126 ALAEKASLQLERLKTLEREISGGAMAVVAVLLNNKLYVANVGTNRALLCKSTVDGLQVTQ 185
Query: 228 LSVDHKPDRHDELIRVEAAG 247
L+VDH + DEL R+ G
Sbjct: 186 LNVDHTTENEDELFRLSQLG 205
>pdb|3QWU|A Chain A, Putative Atp-Dependent Dna Ligase From Aquifex Aeolicus.
pdb|3QWU|B Chain B, Putative Atp-Dependent Dna Ligase From Aquifex Aeolicus
Length = 370
Score = 31.6 bits (70), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 15/26 (57%)
Query: 213 GDSRAVLSRGGVVVPLSVDHKPDRHD 238
GD+ LSRGG + P + D PD D
Sbjct: 92 GDNYYALSRGGFICPFTTDRLPDLID 117
>pdb|3MQ3|A Chain A, Crystal Structure Of Native Bovine Pdp1c
pdb|3N3C|A Chain A, Crystal Structure Of Native Bovine Pdp1c
Length = 467
Score = 31.2 bits (69), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 31/75 (41%), Gaps = 13/75 (17%)
Query: 128 FFGVYDGHGGARVAEACKERM----------HEVLVEVIAGEEYGE---KNIEWERVMEG 174
GV+DGH G ++A ER+ HE L+E+ E G ++W +
Sbjct: 68 LLGVFDGHAGCACSQAVSERLFYYIAVSLLPHETLLEIENAVESGRALLPILQWHKHPND 127
Query: 175 CFGKMDEEVNRGRLR 189
F K ++ LR
Sbjct: 128 YFSKEASKLYFNSLR 142
>pdb|2PNQ|A Chain A, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1
(Pdp1)
pdb|2PNQ|B Chain B, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1
(Pdp1)
Length = 467
Score = 30.4 bits (67), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 13/64 (20%)
Query: 128 FFGVYDGHGGARVAEACKERM----------HEVLVEVIAGEEYGE---KNIEWERVMEG 174
GV+DGH G ++A ER+ HE L+E+ E G ++W +
Sbjct: 68 LLGVFDGHAGCACSQAVSERLFYYIAVSLLPHETLLEIENAVESGRALLPILQWHKHPND 127
Query: 175 CFGK 178
F K
Sbjct: 128 YFSK 131
>pdb|2POM|A Chain A, Tab1 With Manganese Ion
Length = 372
Score = 28.9 bits (63), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Query: 211 NCGDSRAVLSRGGV----VVPLSVDHKPDRHDELIRVEAAG 247
N G +RA+L + V V L+VDH + DEL R+ G
Sbjct: 184 NVGTNRALLCKSTVDGLQVTQLNVDHTTENEDELFRLSQLG 224
>pdb|3MOG|A Chain A, Crystal Structure Of 3-Hydroxybutyryl-Coa Dehydrogenase
From Escherichia Coli K12 Substr. Mg1655
pdb|3MOG|B Chain B, Crystal Structure Of 3-Hydroxybutyryl-Coa Dehydrogenase
From Escherichia Coli K12 Substr. Mg1655
pdb|3MOG|C Chain C, Crystal Structure Of 3-Hydroxybutyryl-Coa Dehydrogenase
From Escherichia Coli K12 Substr. Mg1655
Length = 483
Score = 28.5 bits (62), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 7/59 (11%)
Query: 133 DGHGGARVAEACKERMHEVLVEVIAGEEYGEKNIEWERVMEGCFGKMDEEVNRGRLREE 191
G GA +AE H+VL+ I+ E R ++G +++ V RG+L E
Sbjct: 13 SGTMGAGIAEVAASHGHQVLLYDISAEAL-------TRAIDGIHARLNSRVTRGKLTAE 64
>pdb|2J4O|A Chain A, Structure Of Tab1
Length = 401
Score = 28.5 bits (62), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Query: 211 NCGDSRAVLSRGGV----VVPLSVDHKPDRHDELIRVEAAG 247
N G +RA+L + V V L+VDH + DEL R+ G
Sbjct: 182 NVGTNRALLCKSTVDGLQVTQLNVDHTTENEDELFRLSQLG 222
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.136 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,251,707
Number of Sequences: 62578
Number of extensions: 195575
Number of successful extensions: 439
Number of sequences better than 100.0: 29
Number of HSP's better than 100.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 378
Number of HSP's gapped (non-prelim): 40
length of query: 270
length of database: 14,973,337
effective HSP length: 97
effective length of query: 173
effective length of database: 8,903,271
effective search space: 1540265883
effective search space used: 1540265883
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.3 bits)