Query 024219
Match_columns 270
No_of_seqs 211 out of 1738
Neff 7.7
Searched_HMMs 46136
Date Fri Mar 29 02:57:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024219.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/024219hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0700 Protein phosphatase 2C 100.0 4.2E-50 9E-55 363.9 17.5 232 32-266 49-337 (390)
2 KOG0698 Serine/threonine prote 100.0 1.8E-39 3.9E-44 297.5 22.5 198 53-266 46-250 (330)
3 KOG0697 Protein phosphatase 1B 100.0 1.1E-37 2.4E-42 269.6 17.3 199 47-266 21-237 (379)
4 PF00481 PP2C: Protein phospha 100.0 2.9E-37 6.3E-42 273.1 18.1 194 54-266 7-208 (254)
5 PLN03145 Protein phosphatase 2 100.0 2.3E-34 4.9E-39 266.1 22.1 190 55-265 73-275 (365)
6 PTZ00224 protein phosphatase 2 100.0 6.4E-32 1.4E-36 250.7 21.8 180 52-266 27-216 (381)
7 KOG0699 Serine/threonine prote 100.0 8.2E-31 1.8E-35 234.0 13.0 105 149-266 329-443 (542)
8 COG0631 PTC1 Serine/threonine 100.0 7.7E-28 1.7E-32 214.1 14.9 181 55-266 17-202 (262)
9 cd00143 PP2Cc Serine/threonine 99.9 2.6E-24 5.6E-29 188.2 21.5 187 55-264 9-200 (254)
10 smart00332 PP2Cc Serine/threon 99.9 4.8E-24 1E-28 187.1 22.3 188 54-265 13-204 (255)
11 PRK14559 putative protein seri 99.9 6.1E-23 1.3E-27 200.9 18.3 187 57-265 386-579 (645)
12 KOG1323 Serine/threonine phosp 99.9 6.3E-22 1.4E-26 175.7 14.3 174 78-265 141-414 (493)
13 PF13672 PP2C_2: Protein phosp 99.4 1.6E-12 3.4E-17 111.5 10.8 126 55-196 6-138 (212)
14 KOG0618 Serine/threonine phosp 99.4 1.3E-12 2.8E-17 129.7 10.3 161 81-265 551-721 (1081)
15 smart00331 PP2C_SIG Sigma fact 99.0 9.1E-09 2E-13 86.8 12.8 102 57-179 13-116 (193)
16 KOG1379 Serine/threonine prote 98.9 2.7E-08 5.8E-13 89.0 11.9 110 59-195 89-208 (330)
17 TIGR02865 spore_II_E stage II 97.4 0.0023 5E-08 65.3 12.4 114 57-197 563-678 (764)
18 PF07228 SpoIIE: Stage II spor 97.3 0.0067 1.5E-07 50.6 12.5 87 80-179 3-91 (193)
19 TIGR02276 beta_rpt_yvtn 40-res 27.4 84 0.0018 18.5 2.9 18 161-178 3-20 (42)
20 PF05785 CNF1: Rho-activating 26.4 70 0.0015 28.8 3.2 24 148-172 130-153 (281)
21 PRK09781 hypothetical protein; 21.0 2.7E+02 0.0058 22.5 5.2 51 36-105 80-131 (181)
No 1
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-50 Score=363.86 Aligned_cols=232 Identities=47% Similarity=0.748 Sum_probs=201.4
Q ss_pred CCCccceecCCCCcceeeEeeeeecCCCCCCCceeeecCccccccC-CCCeEEEEEecCCCchHHHHHHHHHHHHHHHHh
Q 024219 32 RQDGLLWYKDSGHHVSGEFSMAVVQANNLLEDQSQVESGSLSTHEF-GPYGTFVGVYDGHGGPETSRYINDHLFQHLKRF 110 (270)
Q Consensus 32 ~~~~~~w~~d~~~~~~~~~~~a~~~~r~~~ED~~~i~~~~~~~~~~-~~~~~~fgVfDGHGG~~aa~~~~~~l~~~l~~~ 110 (270)
..++++|+++...+..+++++++.+.|+.++|+..++.++...... .+++.|+||||||||++|++|++++|+.++..+
T Consensus 49 ~~~~~~~~~~~~~~~~~d~~~~v~~~n~~q~a~~~~~edrv~~~~s~~~~~~fvGIyDGhgGp~as~~v~~~L~~~v~~~ 128 (390)
T KOG0700|consen 49 SVDGLLWYKDRSEHSFGDFSMAVLQANNLQEAQGKAEEDRVSVAVSEENGWLFVGIYDGHGGPDASRFLSDHLYPYVARE 128 (390)
T ss_pred CcccccccccccccCcccchhhhhhhhhhhhhcCCcccCcceeeeeccCCeEEEEEecCCCCccHHHHHHHHHHHHHHHH
Confidence 4688999999999999999999999987777777776655443333 566899999999999999999999999999843
Q ss_pred hhh--------------------------------c-ccchHHHHHHHHHHHHHHHHHHhhhcCCCCCCccCcCccEEEe
Q 024219 111 TSD--------------------------------Q-QSMSADVIRKAYQATEEGFMSLVTKQWPMKPQIAAVGSCCLVG 157 (270)
Q Consensus 111 ~~~--------------------------------~-~~~~~~~i~~af~~~d~~~~~~~~~~~~~~~~~~~~GsTa~v~ 157 (270)
+.. . ...+.++|.+||.++|++|++.+.+++..+|+.+.+||||+++
T Consensus 129 L~~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~~~~~~~v~~al~~Af~~tee~fl~~v~~~~~~~p~lA~~GSC~Lv~ 208 (390)
T KOG0700|consen 129 LQGLLWQDEERFPSEYKSEELEHLLVYWKQLSSADQRHGDVLEALSKAFEATEEDFLEMVDKQLQENPELALVGSCCLVG 208 (390)
T ss_pred hhhhhhhhccccccccccchhhhhhhhhhcccccCccchhHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhcceEEEE
Confidence 322 1 2457899999999999999999999999999999999999999
Q ss_pred EEECCEEEEEEcCCCcEEEEEEeccCCc-eEEEecCCCCCCCCHHHHHHHHHcCCCCCCeEEEeCCeeecCCcccccccc
Q 024219 158 VICGGTLYIANLGDSRAVLGRVVKATGE-VLAIQLSTEHNACIESVRQELQALHPDDSQIVVLKHNVWRVKGLIQVSLSL 236 (270)
Q Consensus 158 li~~~~l~vANvGDSRavl~r~~~~~~~-~~~~~Lt~DH~~~~~~E~~RI~~~g~~~~~~~~~~~~~~rv~G~L~vSRs~ 236 (270)
++++..|||||+|||||||++.. ..++ +.++|||.||+.++++|++||+.+||+++.++++++ |||+|.|+|||||
T Consensus 209 ~i~~~~LyVaN~GDSRAVLG~~~-~~~~~~~A~qLS~dHn~~ne~Ev~Rir~eHPdd~~~vv~~~--~RvkG~L~vsRAf 285 (390)
T KOG0700|consen 209 LIKGGDLYVANVGDSRAVLGVVE-NNGSWLVAVQLSTDHNASNEDEVRRIRSEHPDDPHIVVNKH--WRVKGILQVSRAF 285 (390)
T ss_pred EEeCCeEEEEecCcchhhhceec-CCCCeEEEEecChhhccccHHHHHHHHHhCCCCcceEeecc--ceeeEEEEeeeec
Confidence 99999999999999999999984 4454 799999999999999999999999999999999887 8999999999999
Q ss_pred Ccccccce---------------eeecCcEEEEecc-------CCCeEEEEE
Q 024219 237 CRKWSCAI---------------VFLKAWIFIICAI-------TSQFLYVAI 266 (270)
Q Consensus 237 GD~~~k~~---------------~~~~~~i~~~~~i-------~~~~lila~ 266 (270)
||.++|.. ...+|++.+.|.+ +|+|||||.
T Consensus 286 Gd~~lK~~~~n~e~l~~~fr~~~~~t~PyltaeP~i~~HrL~p~DkFLIlAS 337 (390)
T KOG0700|consen 286 GDGYLKWPEFNQEPLLEKFRIPYIGTPPYLTAEPSITHHKLTPNDKFLILAS 337 (390)
T ss_pred cceeecchhhccchhHhhcCCCCCCCCCceeccceEEEEEcCCCCeEEEEec
Confidence 99999943 2335666666665 888999984
No 2
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-39 Score=297.50 Aligned_cols=198 Identities=29% Similarity=0.388 Sum_probs=160.1
Q ss_pred eeecCCCCCCCceeeecCccccccCCC-CeEEEEEecCCCchHHHHHHHHHHHHHHHHhhhhccc--chHHHHHHHHH-H
Q 024219 53 AVVQANNLLEDQSQVESGSLSTHEFGP-YGTFVGVYDGHGGPETSRYINDHLFQHLKRFTSDQQS--MSADVIRKAYQ-A 128 (270)
Q Consensus 53 a~~~~r~~~ED~~~i~~~~~~~~~~~~-~~~~fgVfDGHGG~~aa~~~~~~l~~~l~~~~~~~~~--~~~~~i~~af~-~ 128 (270)
...+.+..|||.+.............. ...||||||||||+.+|+|++++|+..|.+.+..... ...++++++|. +
T Consensus 46 ~~~~~r~~med~~~~~~~~~~~~~~~~~~~~ffgVfDGHGG~~~A~~~~~~L~~~l~~~~~~~~~~~~~~~a~~~~F~~~ 125 (330)
T KOG0698|consen 46 SIRGRRRKMEDRHVQLPDFLEEDVGGEQDTAFFGVFDGHGGDLAAKFAAKHLHKNLLEQLAFPKDRQDVKDALRRAFLTK 125 (330)
T ss_pred ecCCCCCccCcceeecccccccccCCCCceEEEEEEeCCCCHHHHHHHHHHHHHHHHhhhhcccchHHHHHHHHHHHHHH
Confidence 444457789999987654332222333 5799999999999999999999999999998877653 48899999999 6
Q ss_pred HHHHHHHHhhhcCCCCCCccCcCccEEEeEEECC-EEEEEEcCCCcEEEEEEeccCCceEEEecCCCCCCCCHHHHHHHH
Q 024219 129 TEEGFMSLVTKQWPMKPQIAAVGSCCLVGVICGG-TLYIANLGDSRAVLGRVVKATGEVLAIQLSTEHNACIESVRQELQ 207 (270)
Q Consensus 129 ~d~~~~~~~~~~~~~~~~~~~~GsTa~v~li~~~-~l~vANvGDSRavl~r~~~~~~~~~~~~Lt~DH~~~~~~E~~RI~ 207 (270)
+|..+++. . .....+||||+++++.++ +|||||+|||||||+++ ++.+++||.||+|+.++|++||+
T Consensus 126 ~D~~~~~~-~------~~~~~~gstav~~vi~~~~~l~vaN~GDSRaVl~~~-----~~~a~~Ls~DHkP~~~~E~~RI~ 193 (330)
T KOG0698|consen 126 TDSEFLEK-R------EDNRSGGSTAVVALIKKGRKLYVANVGDSRAVLSRK-----GGVAVQLSVDHKPDREDERERIE 193 (330)
T ss_pred HHHHHHhh-c------cCCCCCcceeeeeeEecCCEEEEEEcCCCcEEEecC-----CCeeeeCCCCCCCCcHHHHHHHH
Confidence 99999876 1 113568999999999966 99999999999999986 23899999999999999999999
Q ss_pred HcCCCCCCeEEEeCCeeecCCccccccccCccccc-ceeeecCcEEEEecc-CCCeEEEEE
Q 024219 208 ALHPDDSQIVVLKHNVWRVKGLIQVSLSLCRKWSC-AIVFLKAWIFIICAI-TSQFLYVAI 266 (270)
Q Consensus 208 ~~g~~~~~~~~~~~~~~rv~G~L~vSRs~GD~~~k-~~~~~~~~i~~~~~i-~~~~lila~ 266 (270)
++|+ .+....++|||+|.|++||+|||+.+| ..++..|.+...+.- .++|||||.
T Consensus 194 ~~GG----~v~~~~~~~Rv~G~LavsRa~GD~~~k~~~v~a~Pei~~~~~~~~deFLiLas 250 (330)
T KOG0698|consen 194 AAGG----RVSNWGGVWRVNGVLAVSRAFGDVELKSQGVIAEPEIQQVKINSDDEFLILAS 250 (330)
T ss_pred HcCC----EEEEcCCcceEeceEEEeeecCCHHhcCCcEecCCceEEEEcCCCCcEEEEeC
Confidence 9994 555555679999999999999999999 555555655543332 578999985
No 3
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-37 Score=269.60 Aligned_cols=199 Identities=22% Similarity=0.280 Sum_probs=159.0
Q ss_pred eeeEeeeeecCCC-CCCCceeeecCccccccCCCCeEEEEEecCCCchHHHHHHHHHHHHHHHHhhhhcc-------cch
Q 024219 47 SGEFSMAVVQANN-LLEDQSQVESGSLSTHEFGPYGTFVGVYDGHGGPETSRYINDHLFQHLKRFTSDQQ-------SMS 118 (270)
Q Consensus 47 ~~~~~~a~~~~r~-~~ED~~~i~~~~~~~~~~~~~~~~fgVfDGHGG~~aa~~~~~~l~~~l~~~~~~~~-------~~~ 118 (270)
--.|++++.|++. .|||++.....- ..+-+++.||+|||||.|+++|.+++++|...+...-.+.. ++.
T Consensus 21 glryg~SSMQGWR~eMEDah~A~~~l---~~~l~dWSfFAVfDGHAGs~va~~c~~hLlehi~sse~F~~~~k~gsv~~~ 97 (379)
T KOG0697|consen 21 GLRYGVSSMQGWRVEMEDAHTAVAGL---PSPLEDWSFFAVFDGHAGSQVANHCAEHLLEHIISSEEFRGMTKNGSVENV 97 (379)
T ss_pred ceeeeeccccchhhhhhhhhhhhhcC---CCCccCceEEEEEcCccchHHHHHHHHHHHHHhhhhHHHhhhccCCcHHHH
Confidence 3457888888755 799999865421 13456689999999999999999999999999876332221 356
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCCCccCcCccEEEeEEECCEEEEEEcCCCcEEEEEEeccCCceEEEecCCCCCCC
Q 024219 119 ADVIRKAYQATEEGFMSLVTKQWPMKPQIAAVGSCCLVGVICGGTLYIANLGDSRAVLGRVVKATGEVLAIQLSTEHNAC 198 (270)
Q Consensus 119 ~~~i~~af~~~d~~~~~~~~~~~~~~~~~~~~GsTa~v~li~~~~l~vANvGDSRavl~r~~~~~~~~~~~~Lt~DH~~~ 198 (270)
+.-|+.+|.++|+.+....+... ....+||||+.+++...++|++|||||||||||+ +.++.-|.||+|.
T Consensus 98 ~~GIrtGFL~iDE~mr~~~~~~~----~~drsGsTAVcv~vsp~h~y~~NcGDSRavl~rn------g~~~f~TqDHKP~ 167 (379)
T KOG0697|consen 98 EKGIRTGFLSIDEIMRTLSDISK----GSDRSGSTAVCVFVSPTHIYIINCGDSRAVLCRN------GEVVFSTQDHKPY 167 (379)
T ss_pred HhhHhhcceeHHHHHhhhhhhhc----ccccCCceEEEEEecCceEEEEecCcchhheecC------CceEEeccCCCCC
Confidence 78899999999987766543321 1245999999999999999999999999999997 8999999999999
Q ss_pred CHHHHHHHHHcCCCCCCeEEEeCCeeecCCccccccccCcccccce---------eeecCcEEEE-eccCCCeEEEEE
Q 024219 199 IESVRQELQALHPDDSQIVVLKHNVWRVKGLIQVSLSLCRKWSCAI---------VFLKAWIFII-CAITSQFLYVAI 266 (270)
Q Consensus 199 ~~~E~~RI~~~g~~~~~~~~~~~~~~rv~G~L~vSRs~GD~~~k~~---------~~~~~~i~~~-~~i~~~~lila~ 266 (270)
+|.|++||+.+|| .+.++ ||+|.|+|||||||+.+|.. +...|.++.. ....|+|+|||+
T Consensus 168 ~p~EkeRIqnAGG----SVMIq----RvNGsLAVSRAlGDydyK~v~~kgp~eQlVSPEPev~~~~R~eedeFivlAC 237 (379)
T KOG0697|consen 168 LPKEKERIQNAGG----SVMIQ----RVNGSLAVSRALGDYDYKNVPGKGPTEQLVSPEPEVYIIERSEEDEFIVLAC 237 (379)
T ss_pred ChHHHHHHhcCCC----eEEEE----EecceeeeehhccCcccccCCCCCchhcccCCCCceEEeeccccCcEEEEEc
Confidence 9999999999994 56666 99999999999999999964 3333444432 224888999997
No 4
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 2I0O_A 2POP_C 2POM_A 2J4O_A 2I44_B 3MQ3_A 3N3C_A 2PNQ_B 2P8E_A 2IQ1_A ....
Probab=100.00 E-value=2.9e-37 Score=273.13 Aligned_cols=194 Identities=28% Similarity=0.326 Sum_probs=145.3
Q ss_pred eecCCCCCCCceeeecCccccccCCCCeEEEEEecCCCchHHHHHHHHHHHHHHHHhhhhccc-chHHHHHHHHHH-HHH
Q 024219 54 VVQANNLLEDQSQVESGSLSTHEFGPYGTFVGVYDGHGGPETSRYINDHLFQHLKRFTSDQQS-MSADVIRKAYQA-TEE 131 (270)
Q Consensus 54 ~~~~r~~~ED~~~i~~~~~~~~~~~~~~~~fgVfDGHGG~~aa~~~~~~l~~~l~~~~~~~~~-~~~~~i~~af~~-~d~ 131 (270)
..+.|..|||.+.+..... ......+..+|||||||||+++|+|++++|+..|.+....... .+.++|.++|.+ +++
T Consensus 7 ~~g~r~~~eD~~~~~~~~~-~~~~~~~~~l~~V~DGhgG~~~a~~~~~~l~~~l~~~~~~~~~~~~~~al~~a~~~~~~~ 85 (254)
T PF00481_consen 7 MQGVRKEMEDRHLIIQNFN-SNSGNDNVSLFGVFDGHGGSEAAEYASQNLPEFLKENLSFNDGNDIEEALRQAFLAFTDE 85 (254)
T ss_dssp EECTSSSHHEEEEEEEEET-CCTTEEEEEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCcccCEEEEecCcc-ccCCCCCcEEEEEecCCCChhhHHHHHHHHHHHHHhhcccccccchhhcccceeeecccc
Confidence 3456889999998754221 1133455799999999999999999999999999887776654 688999999999 888
Q ss_pred HHHHHhhhcCCCCCCccCcCccEEEeEEECCEEEEEEcCCCcEEEEEEeccCCceEEE-ecCCCCCCCCHHHHHHHHHcC
Q 024219 132 GFMSLVTKQWPMKPQIAAVGSCCLVGVICGGTLYIANLGDSRAVLGRVVKATGEVLAI-QLSTEHNACIESVRQELQALH 210 (270)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~GsTa~v~li~~~~l~vANvGDSRavl~r~~~~~~~~~~~-~Lt~DH~~~~~~E~~RI~~~g 210 (270)
.+.+..... ....+||||++++|.++++||||||||||||++. +... +||.||+|+++.|++||++.|
T Consensus 86 ~~~~~~~~~-----~~~~~GsTa~v~li~~~~l~vanvGDSravl~~~------~~~~~~Lt~dH~~~~~~E~~RI~~~g 154 (254)
T PF00481_consen 86 SLYSDSENN-----ESSKSGSTATVALIDGNKLYVANVGDSRAVLCRN------GGIIKQLTRDHKPSNPDERERIRKAG 154 (254)
T ss_dssp HHHHHHHHH-----THTTSEEEEEEEEEETTEEEEEEESS-EEEEEET------TEEEEESS---STTSHHHHHHHHHTT
T ss_pred ccccccccc-----ccccccccccccccccceeEEEeeeeeeeeeeec------cccccccccccccchhhccceeeccc
Confidence 887633220 1267999999999999999999999999999997 4444 999999999999999999999
Q ss_pred CCCCCeEEEeCCeeecCCccccccccCcccccc----eeeecCcEEEEeccC-CCeEEEEE
Q 024219 211 PDDSQIVVLKHNVWRVKGLIQVSLSLCRKWSCA----IVFLKAWIFIICAIT-SQFLYVAI 266 (270)
Q Consensus 211 ~~~~~~~~~~~~~~rv~G~L~vSRs~GD~~~k~----~~~~~~~i~~~~~i~-~~~lila~ 266 (270)
| .+.. .+||+|.|++||+|||..+|+ .+...|.+..+..-. ++|||||.
T Consensus 155 g----~v~~---~~rv~g~l~~sRalGd~~~k~~~~~~v~~~P~i~~~~l~~~d~flvlaS 208 (254)
T PF00481_consen 155 G----RVSE---NGRVNGVLAVSRALGDFDLKPPGKPGVIAEPDISEVDLTPDDEFLVLAS 208 (254)
T ss_dssp -----GEEE---TEEETTTBSSSB-EE-GGGTTCTSSSSB---EEEEEEEBTTEEEEEEE-
T ss_pred c----cccc---chhhhhccccccccccccccccccceeeeecccccccccccceEEEEEc
Confidence 5 2322 469999999999999999998 555556655433333 34777763
No 5
>PLN03145 Protein phosphatase 2c; Provisional
Probab=100.00 E-value=2.3e-34 Score=266.07 Aligned_cols=190 Identities=23% Similarity=0.326 Sum_probs=144.7
Q ss_pred ecCCCCCCCceeeecCccc---c-ccCCCCeEEEEEecCCCchHHHHHHHHHHHHHHHHhhhhcccchHHHHHHHHHHHH
Q 024219 55 VQANNLLEDQSQVESGSLS---T-HEFGPYGTFVGVYDGHGGPETSRYINDHLFQHLKRFTSDQQSMSADVIRKAYQATE 130 (270)
Q Consensus 55 ~~~r~~~ED~~~i~~~~~~---~-~~~~~~~~~fgVfDGHGG~~aa~~~~~~l~~~l~~~~~~~~~~~~~~i~~af~~~d 130 (270)
.+.|..|||++.+...... . ........||||||||||+.+|+|++++|++.|.+..... ..+.++|.++|.+++
T Consensus 73 ~G~R~~nED~~~~~~~~~~~~~~~~~~~~~~~lf~V~DGhGG~~age~as~~l~~~i~~~~~~~-~~~~~al~~af~~~d 151 (365)
T PLN03145 73 IGSRSSMEDVYICVDNFMSDFGLKNSEDGPSAFYGVFDGHGGKHAADFACYHLPRFIVEDEDFP-REIEKVVSSAFLQTD 151 (365)
T ss_pred ccCCCCCCCceEecccccccccccccCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHhhhccc-hhHHHHHHHHHHHHh
Confidence 3458999999876432110 0 0112235899999999999999999999999998743332 356788999999999
Q ss_pred HHHHHHhhhcCCCCCCccCcCccEEEeEEECCEEEEEEcCCCcEEEEEEeccCCceEEEecCCCCCCCCHHHHHHHHHcC
Q 024219 131 EGFMSLVTKQWPMKPQIAAVGSCCLVGVICGGTLYIANLGDSRAVLGRVVKATGEVLAIQLSTEHNACIESVRQELQALH 210 (270)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~GsTa~v~li~~~~l~vANvGDSRavl~r~~~~~~~~~~~~Lt~DH~~~~~~E~~RI~~~g 210 (270)
+.|.+..... ....+|||+++++|.++++||||+||||||+++. +++++||.||+|.++.|++||++.|
T Consensus 152 ~~~~~~~~~~-----~~~~~GTTavv~li~~~~l~vaNvGDSRayl~r~------g~~~~LT~DH~~~~~~E~~RI~~~G 220 (365)
T PLN03145 152 TAFAEACSLD-----ASLASGTTALAALVVGRSLVVANAGDCRAVLCRR------GKAIEMSRDHKPMCSKERKRIEASG 220 (365)
T ss_pred HHHHhhhccc-----cCCCCcCcEEEEEEECCeEEEEecCCceEEEEcC------CeEEEecCCCCCCCHHHHHHHHHcC
Confidence 9987653221 1245899999999999999999999999999997 7899999999999999999999988
Q ss_pred CCCCCeEEEeCCeeecCCccccccccCcccccce-------eeecCcEEEEecc--CCCeEEEE
Q 024219 211 PDDSQIVVLKHNVWRVKGLIQVSLSLCRKWSCAI-------VFLKAWIFIICAI--TSQFLYVA 265 (270)
Q Consensus 211 ~~~~~~~~~~~~~~rv~G~L~vSRs~GD~~~k~~-------~~~~~~i~~~~~i--~~~~lila 265 (270)
+ .+. .+ |++|.|++||+|||+.+|.+ +...|.+. ...+ .+.|||||
T Consensus 221 g----~v~--~g--~v~g~l~vTRalGD~~~k~~k~~~~~~vs~ePdv~-~~~l~~~D~fLILa 275 (365)
T PLN03145 221 G----YVY--DG--YLNGQLNVARALGDWHMEGMKGSDGGPLSAEPELM-TTQLTEEDEFLIIG 275 (365)
T ss_pred C----cee--cc--eECCccccccccccccccccccccCCCcceEEEEE-EEECCCCCEEEEEe
Confidence 4 332 23 89999999999999988753 23334443 3344 45577666
No 6
>PTZ00224 protein phosphatase 2C; Provisional
Probab=100.00 E-value=6.4e-32 Score=250.70 Aligned_cols=180 Identities=23% Similarity=0.225 Sum_probs=139.6
Q ss_pred eeeecCCCCCCCceeeecCccccccCCCCeEEEEEecCCCchHHHHHHHHHHHHHHHHhhhhcccchHHHHHHHHHHHHH
Q 024219 52 MAVVQANNLLEDQSQVESGSLSTHEFGPYGTFVGVYDGHGGPETSRYINDHLFQHLKRFTSDQQSMSADVIRKAYQATEE 131 (270)
Q Consensus 52 ~a~~~~r~~~ED~~~i~~~~~~~~~~~~~~~~fgVfDGHGG~~aa~~~~~~l~~~l~~~~~~~~~~~~~~i~~af~~~d~ 131 (270)
.+..+.|+.|||++.+.. .++..||||||||||.++|+|+.++|+..+.+... ....+.|+++|..+|+
T Consensus 27 ~s~~G~R~~nED~~~v~~--------~~~~~lfgVfDGHgG~~~S~~~~~~l~~~l~~~~~---~~~~~~l~~a~~~~d~ 95 (381)
T PTZ00224 27 ACVNGYRESMEDAHLLYL--------TDDWGFFGVFDGHVNDECSQYLARAWPQALEKEPE---PMTDERMEELCLEIDE 95 (381)
T ss_pred EeCCCCCCCCCCeeEecc--------CCCceEEEEEeCCCcHHHHHHHHHHHHHHHHhccc---cccHHHHHHHHHHHHH
Confidence 344456888999987632 12357999999999999999999999988765322 2245679999999999
Q ss_pred HHHHHhhhcCCCCCCccCcCccEEEeEEE-CCEEEEEEcCCCcEEEEEEeccCCceEEEecCCCCCCCCHHHHHHHHHcC
Q 024219 132 GFMSLVTKQWPMKPQIAAVGSCCLVGVIC-GGTLYIANLGDSRAVLGRVVKATGEVLAIQLSTEHNACIESVRQELQALH 210 (270)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~GsTa~v~li~-~~~l~vANvGDSRavl~r~~~~~~~~~~~~Lt~DH~~~~~~E~~RI~~~g 210 (270)
.+++.. ..+|||+++++|. ++++|||||||||||+++. +++++||.||++.++.|++||.+.+
T Consensus 96 ~i~~~~----------~~~GsTatv~lI~~~~~l~vaNVGDSRayl~r~------g~~~~LT~DH~~~~~~E~~RI~~~g 159 (381)
T PTZ00224 96 EWMDSG----------REGGSTGTFCVIMKDVHLQVGNVGDSRVLVCRD------GKLVFATEDHKPNNPGERQRIEACG 159 (381)
T ss_pred HHHhcc----------cCCCCeEEEEEEEECCEEEEEEcccceEEEEEC------CEEEEcccCCCCCCHHHHhHHHHcc
Confidence 987432 2369999998886 6799999999999999996 7899999999999999999999987
Q ss_pred CCCCCeEEEeCCeeecCCccccccccCccccccee---------eecCcEEEEeccCCCeEEEEE
Q 024219 211 PDDSQIVVLKHNVWRVKGLIQVSLSLCRKWSCAIV---------FLKAWIFIICAITSQFLYVAI 266 (270)
Q Consensus 211 ~~~~~~~~~~~~~~rv~G~L~vSRs~GD~~~k~~~---------~~~~~i~~~~~i~~~~lila~ 266 (270)
+ .+. . +||+|.|++||+|||..+|... +..|.+..+..-.++|+|||.
T Consensus 160 g----~v~--~--~Rv~G~l~vTRalGd~~~K~~~~~~~~~~~v~~~Pdi~~~~l~~~D~llLaS 216 (381)
T PTZ00224 160 G----RVV--S--NRVDGDLAVSRAFGDRSFKVKGTGDYLEQKVIAVPDVTHLTCQSNDFIILAC 216 (381)
T ss_pred C----Eec--c--ccccCceeeecccCCcccccccccccccCcceeeeEEEEEECCCCCEEEEEC
Confidence 4 222 1 3999999999999998876542 234444443333677888873
No 7
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=99.97 E-value=8.2e-31 Score=233.99 Aligned_cols=105 Identities=27% Similarity=0.297 Sum_probs=89.3
Q ss_pred CcCccEEEeEEECCEEEEEEcCCCcEEEEEEeccCCceEEEecCCCCCCCCHHHHHHHHHcCCCCCCeEEEeCCeeecCC
Q 024219 149 AVGSCCLVGVICGGTLYIANLGDSRAVLGRVVKATGEVLAIQLSTEHNACIESVRQELQALHPDDSQIVVLKHNVWRVKG 228 (270)
Q Consensus 149 ~~GsTa~v~li~~~~l~vANvGDSRavl~r~~~~~~~~~~~~Lt~DH~~~~~~E~~RI~~~g~~~~~~~~~~~~~~rv~G 228 (270)
.+||||+|+||.+++|||||.||||+|++|. ++++-+|.||+|..+.|..||.++|| .|.+. | ||+|
T Consensus 329 DSGtTAvVcLv~g~~liVANAGDSRcV~sr~------GkAvdmS~DHKPEDevE~~RI~~AGG----~vtlD-G--RVNG 395 (542)
T KOG0699|consen 329 DSGTTAVVCLVGGDKLIVANAGDSRCVLSRN------GKAVDMSVDHKPEDEVETNRIHAAGG----QVTLD-G--RVNG 395 (542)
T ss_pred CCCceEEEEEecCceEEEecCCCcceEEecC------CceeecccCCCcccHHHHHHHHhcCC----eEeec-c--eecC
Confidence 3899999999999999999999999999998 99999999999999999999999995 33333 3 9999
Q ss_pred ccccccccCcccccceeeecCcEEE---Eec-----c--CCCeEEEEE
Q 024219 229 LIQVSLSLCRKWSCAIVFLKAWIFI---ICA-----I--TSQFLYVAI 266 (270)
Q Consensus 229 ~L~vSRs~GD~~~k~~~~~~~~i~~---~~~-----i--~~~~lila~ 266 (270)
.|.+||+|||..||...-+++.... .|. + .++|+|||+
T Consensus 396 GLNLSRA~GDHaYK~N~~Lp~eEQMIsALPDiK~l~lTpedEFmVvAC 443 (542)
T KOG0699|consen 396 GLNLSRAFGDHAYKKNQELPLEEQMISALPDIKILALTPEDEFMVVAC 443 (542)
T ss_pred ccchhhhhhhhhhhcccCCChHHHHhhhcccceeEeecCcccEEEEEc
Confidence 9999999999999987666553322 222 2 677888886
No 8
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=99.95 E-value=7.7e-28 Score=214.05 Aligned_cols=181 Identities=19% Similarity=0.179 Sum_probs=141.4
Q ss_pred ecCCCCCCCceeeecCccccccCCCCeEEEEEecCCCchHHHHHHHHHHHHHHHHhhhhccc-c----hHHHHHHHHHHH
Q 024219 55 VQANNLLEDQSQVESGSLSTHEFGPYGTFVGVYDGHGGPETSRYINDHLFQHLKRFTSDQQS-M----SADVIRKAYQAT 129 (270)
Q Consensus 55 ~~~r~~~ED~~~i~~~~~~~~~~~~~~~~fgVfDGHGG~~aa~~~~~~l~~~l~~~~~~~~~-~----~~~~i~~af~~~ 129 (270)
...|..|||++.+.. ...... ..||+|||||||+++++++++.+.+.|.+.+..... . ..+.+.+++..+
T Consensus 17 g~~R~~NeD~~~~~~----~~~~~~-~~l~~V~DG~GGh~~ge~aS~~~v~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~ 91 (262)
T COG0631 17 GTVRKHNEDAFLIKP----NENGNL-LLLFAVADGMGGHAAGEVASKLAVEALARLFDETNFNSLNESLEELLKEAILKA 91 (262)
T ss_pred CCccCCCCcceeecc----ccCCcc-eeEEEEEeCccchhHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHH
Confidence 345678999998843 111122 479999999999999999999999999987665431 1 578999999999
Q ss_pred HHHHHHHhhhcCCCCCCccCcCccEEEeEEECCEEEEEEcCCCcEEEEEEeccCCceEEEecCCCCCCCCHHHHHHHHHc
Q 024219 130 EEGFMSLVTKQWPMKPQIAAVGSCCLVGVICGGTLYIANLGDSRAVLGRVVKATGEVLAIQLSTEHNACIESVRQELQAL 209 (270)
Q Consensus 130 d~~~~~~~~~~~~~~~~~~~~GsTa~v~li~~~~l~vANvGDSRavl~r~~~~~~~~~~~~Lt~DH~~~~~~E~~RI~~~ 209 (270)
++.+.+... .......+|||++++++.++++|||||||||+||+++ +.+.+||.||++.++.|+.|+...
T Consensus 92 n~~i~~~~~----~~~~~~~mgtTl~~~~~~~~~l~~a~vGDSR~yl~~~------~~~~~lT~DH~~~~~~~~~~~~~~ 161 (262)
T COG0631 92 NEAIAEEGQ----LNEDVRGMGTTLVLLLIRGNKLYVANVGDSRAYLLRD------GELKQLTEDHSLVNRLEQRGIITP 161 (262)
T ss_pred HHHHHHhhh----cccccCCCceeEEEEEEECCeEEEEEccCCeEEEEcC------CceEEeccCCcHHHHHHHhcCCCH
Confidence 999987643 1234578999999999999999999999999999997 799999999999999999987655
Q ss_pred CCCCCCeEEEeCCeeecCCccccccccCcccccceeeecCcEEEEeccCCCeEEEEE
Q 024219 210 HPDDSQIVVLKHNVWRVKGLIQVSLSLCRKWSCAIVFLKAWIFIICAITSQFLYVAI 266 (270)
Q Consensus 210 g~~~~~~~~~~~~~~rv~G~L~vSRs~GD~~~k~~~~~~~~i~~~~~i~~~~lila~ 266 (270)
++ .... .|.+ ++||+|||... ..|.+.....-.++|+||+.
T Consensus 162 ~~----~~~~----~~~~---~ltralG~~~~-----~~p~~~~~~~~~~d~llL~S 202 (262)
T COG0631 162 EE----ARSH----PRRN---ALTRALGDFDL-----LEPDITELELEPGDFLLLCS 202 (262)
T ss_pred HH----HHhC----ccch---hhhhhcCCCcc-----cceeEEEEEcCCCCEEEEEC
Confidence 42 1110 1333 89999999984 55666665555668988874
No 9
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=99.93 E-value=2.6e-24 Score=188.15 Aligned_cols=187 Identities=26% Similarity=0.348 Sum_probs=146.5
Q ss_pred ecCCCCCCCceeeecCccccccCCCCeEEEEEecCCCchHHHHHHHHHHHHHHHHhhhhc----ccchHHHHHHHHHHHH
Q 024219 55 VQANNLLEDQSQVESGSLSTHEFGPYGTFVGVYDGHGGPETSRYINDHLFQHLKRFTSDQ----QSMSADVIRKAYQATE 130 (270)
Q Consensus 55 ~~~r~~~ED~~~i~~~~~~~~~~~~~~~~fgVfDGHGG~~aa~~~~~~l~~~l~~~~~~~----~~~~~~~i~~af~~~d 130 (270)
.+.|..|||++.+...... .+..+|+|+|||||+..++++++.+.+.+.+.+... ...+.+.|+++|..++
T Consensus 9 ~g~r~~neD~~~~~~~~~~-----~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~ 83 (254)
T cd00143 9 GGDRKTNEDAVVIKPNLNN-----EDGGLFGVFDGHGGHAAGEFASKLLVEELLEELEETLTLSEEDIEEALRKAFLRAD 83 (254)
T ss_pred CCCCCCCcceEEEeccCCC-----CCcEEEEEEcCCChHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHH
Confidence 3446789999987431100 246899999999999999999999999998877654 3456788999999999
Q ss_pred HHHHHHhhhcCCCCCCccCcCccEEEeEEECCEEEEEEcCCCcEEEEEEeccCCceEEEecCCCCCCCCHHHHHHHHHcC
Q 024219 131 EGFMSLVTKQWPMKPQIAAVGSCCLVGVICGGTLYIANLGDSRAVLGRVVKATGEVLAIQLSTEHNACIESVRQELQALH 210 (270)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~GsTa~v~li~~~~l~vANvGDSRavl~r~~~~~~~~~~~~Lt~DH~~~~~~E~~RI~~~g 210 (270)
+.+....... .....+|||++++++.+++++++|+||||+|+++. ++.+++|.||++.++.|+.||.+.+
T Consensus 84 ~~l~~~~~~~----~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~~~~~~------~~~~~lt~dh~~~~~~~~~~i~~~~ 153 (254)
T cd00143 84 EEILEEAQDE----PDDARSGTTAVVALIRGNKLYVANVGDSRAVLCRN------GEAVQLTKDHKPVNEEERERIEKAG 153 (254)
T ss_pred HHHHHhhhhc----cCCCCCCCcEEEEEEECCEEEEEEecCcEEEEEcC------CceeEcCCCCCCcChHHHHHHHHcC
Confidence 9987765432 23366899999999999999999999999999997 6899999999999999999999987
Q ss_pred CCCCCeEEEeCCeeecCCccccccccCcccccceeeecCcEEEEec-cCCCeEEE
Q 024219 211 PDDSQIVVLKHNVWRVKGLIQVSLSLCRKWSCAIVFLKAWIFIICA-ITSQFLYV 264 (270)
Q Consensus 211 ~~~~~~~~~~~~~~rv~G~L~vSRs~GD~~~k~~~~~~~~i~~~~~-i~~~~lil 264 (270)
+.. . ..+.++...+||+||+..+|+.....|.+..... -..++++|
T Consensus 154 ~~~----~----~~~~~~~~~~t~~lG~~~~~~~~~~~~~~~~~~l~~~~d~ill 200 (254)
T cd00143 154 GRV----S----NGRVPGVLAVTRALGDFDLKPGVSAEPDVTVVKLTEDDDFLIL 200 (254)
T ss_pred CcE----E----eCEEcCceeeccccCCccccCCEEcCCeEEEEEeCCCCcEEEE
Confidence 521 1 1267788899999999988866666666655443 34445444
No 10
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain. The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=99.93 E-value=4.8e-24 Score=187.12 Aligned_cols=188 Identities=28% Similarity=0.432 Sum_probs=149.3
Q ss_pred eecCCCCCCCceeeecCccccccCCCCeEEEEEecCCCchHHHHHHHHHHHHHHHHhhhhccc---chHHHHHHHHHHHH
Q 024219 54 VVQANNLLEDQSQVESGSLSTHEFGPYGTFVGVYDGHGGPETSRYINDHLFQHLKRFTSDQQS---MSADVIRKAYQATE 130 (270)
Q Consensus 54 ~~~~r~~~ED~~~i~~~~~~~~~~~~~~~~fgVfDGHGG~~aa~~~~~~l~~~l~~~~~~~~~---~~~~~i~~af~~~d 130 (270)
..+.|.++||++.+.... ..+..+|+|+|||||+.+|+++++.+...+.+....... .+.+.|++++.+++
T Consensus 13 ~~~~r~~neD~~~~~~~~------~~~~~~~~v~DG~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 86 (255)
T smart00332 13 MQGVRKPMEDAHVITPDL------SDSGAFFGVFDGHGGSEAAKFLSKNLPEILAEELIKHKDELEDVEEALRKAFLKTD 86 (255)
T ss_pred CCCCCCCCcceEEEeccC------CCCeEEEEEEeCCCcHHHHHHHHHHHHHHHHHhHhhcccchhHHHHHHHHHHHHHH
Confidence 345678899999874311 134689999999999999999999999998876544432 47788999999999
Q ss_pred HHHHHHhhhcCCCCCCccCcCccEEEeEEECCEEEEEEcCCCcEEEEEEeccCCceEEEecCCCCCCCCHHHHHHHHHcC
Q 024219 131 EGFMSLVTKQWPMKPQIAAVGSCCLVGVICGGTLYIANLGDSRAVLGRVVKATGEVLAIQLSTEHNACIESVRQELQALH 210 (270)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~GsTa~v~li~~~~l~vANvGDSRavl~r~~~~~~~~~~~~Lt~DH~~~~~~E~~RI~~~g 210 (270)
+.+.+...... ....+|||++++++.++++|++|+||||+|+++. ++..+||.||++.++.|+.||.+.+
T Consensus 87 ~~~~~~~~~~~----~~~~~gtT~~~~~~~~~~l~~~~vGDsr~y~~~~------~~~~~lt~dh~~~~~~~~~~i~~~~ 156 (255)
T smart00332 87 EEILEELESLE----EDAGSGSTAVVALISGNKLYVANVGDSRAVLCRN------GKAVQLTEDHKPSNEDERARIEAAG 156 (255)
T ss_pred HHHHHhhhhcc----CCCCCCccEEEEEEECCEEEEEeccCceEEEEeC------CceeEcCCCCCCcCHHHHHHHHHcC
Confidence 99987654432 2356899999999999999999999999999997 6789999999999999999999988
Q ss_pred CCCCCeEEEeCCeeecCCccccccccCcccccceeeecCcEEEEec-cCCCeEEEE
Q 024219 211 PDDSQIVVLKHNVWRVKGLIQVSLSLCRKWSCAIVFLKAWIFIICA-ITSQFLYVA 265 (270)
Q Consensus 211 ~~~~~~~~~~~~~~rv~G~L~vSRs~GD~~~k~~~~~~~~i~~~~~-i~~~~lila 265 (270)
+ .+.+ ++.++.+.+||++|+..+|+.....|.+..... -..++++|+
T Consensus 157 ~-----~~~~---~~~~~~~~lt~~~g~~~~~~~i~~~p~~~~~~~~~~~d~ill~ 204 (255)
T smart00332 157 G-----FVIN---GRVNGVLALSRAIGDFFLKPYVSAEPDVTVVELTEKDDFLILA 204 (255)
T ss_pred C-----EEEC---CeECCeEecccccCCHhhcCCeEeeeEEEEEEecCCCcEEEEE
Confidence 4 2222 278888899999999998877777777666553 344555553
No 11
>PRK14559 putative protein serine/threonine phosphatase; Provisional
Probab=99.90 E-value=6.1e-23 Score=200.92 Aligned_cols=187 Identities=15% Similarity=0.147 Sum_probs=119.8
Q ss_pred CCCCCCCceeeecCccc--cccC--CCCeEEEEEecCCCchHHHHHHHHHHHHHHHHhhhhc---ccchHHHHHHHHHHH
Q 024219 57 ANNLLEDQSQVESGSLS--THEF--GPYGTFVGVYDGHGGPETSRYINDHLFQHLKRFTSDQ---QSMSADVIRKAYQAT 129 (270)
Q Consensus 57 ~r~~~ED~~~i~~~~~~--~~~~--~~~~~~fgVfDGHGG~~aa~~~~~~l~~~l~~~~~~~---~~~~~~~i~~af~~~ 129 (270)
.|+.|||++.+...... ...+ .....||+|||||||+.+++.|++...+.|.+++... .....+.|+++|..+
T Consensus 386 ~R~~NEDa~~i~~~~~~~~~~~~~~~~~~~L~aVaDGmGGh~~GevAS~lAv~~L~~~~~~~~~~~~~~~~~L~~ai~~A 465 (645)
T PRK14559 386 QRHHNEDYFGINTRIQKLENPHGRIVQARGLYILCDGMGGHAAGEVASALAVETLQQYFQQHWQDELPDEETIREAIYLA 465 (645)
T ss_pred CCcccCCcccccccccccccccccccccceEEEEEeCCCCchhHHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHHHH
Confidence 48889998865321000 0000 1124689999999988866665555555554433221 112467899999999
Q ss_pred HHHHHHHhhhcCCCCCCccCcCccEEEeEEECCEEEEEEcCCCcEEEEEEeccCCceEEEecCCCCCCCCHHHHHHHHHc
Q 024219 130 EEGFMSLVTKQWPMKPQIAAVGSCCLVGVICGGTLYIANLGDSRAVLGRVVKATGEVLAIQLSTEHNACIESVRQELQAL 209 (270)
Q Consensus 130 d~~~~~~~~~~~~~~~~~~~~GsTa~v~li~~~~l~vANvGDSRavl~r~~~~~~~~~~~~Lt~DH~~~~~~E~~RI~~~ 209 (270)
++.+.+...+.. ......||||++++++.++++|||||||||+|++++ +++.++||.||++.... .+.
T Consensus 466 N~~I~~~~~~~~--~~~~~~MGTTlv~alI~~~~l~ianVGDSRaYli~r-----~g~l~QLT~DHs~~~~l-----v~~ 533 (645)
T PRK14559 466 NEAIYDLNQQNA--RSGSGRMGTTLVMALVQDTQVAVAHVGDSRLYRVTR-----KGGLEQLTVDHEVGQRE-----IQR 533 (645)
T ss_pred HHHHHHHhhhcc--cccCCCCCceeeeEEEECCEEEEEEecCceEEEEec-----CCeEEEeCCCCCHHHHH-----HHh
Confidence 999987543321 112356999999999999999999999999999865 37899999999986433 222
Q ss_pred CCCCCCeEEEeCCeeecCCccccccccCcccccceeeecCcEEEEeccCCCeEEEE
Q 024219 210 HPDDSQIVVLKHNVWRVKGLIQVSLSLCRKWSCAIVFLKAWIFIICAITSQFLYVA 265 (270)
Q Consensus 210 g~~~~~~~~~~~~~~rv~G~L~vSRs~GD~~~k~~~~~~~~i~~~~~i~~~~lila 265 (270)
|- .+. ... .|. +...+||+||+...+. ..|.+..+..-.+++++|+
T Consensus 534 Gi-~~~-~a~----~~p-~~~~LTrALG~~~~~~---l~Pdi~~~~L~~gD~lLLC 579 (645)
T PRK14559 534 GV-EPQ-IAY----ARP-DAYQLTQALGPRDNSA---IQPDIQFLEIEEDTLLLLC 579 (645)
T ss_pred CC-CHH-HHh----cCc-ccceeeeccCCCCCCc---ccceEEEEEcCCCCEEEEE
Confidence 31 110 010 132 3468999999976432 3455554433366676665
No 12
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms]
Probab=99.88 E-value=6.3e-22 Score=175.65 Aligned_cols=174 Identities=28% Similarity=0.390 Sum_probs=129.9
Q ss_pred CCCeEEEEEecCCCchHHHHHHHHHHHHHHHHhhhhc---------------------------------------ccch
Q 024219 78 GPYGTFVGVYDGHGGPETSRYINDHLFQHLKRFTSDQ---------------------------------------QSMS 118 (270)
Q Consensus 78 ~~~~~~fgVfDGHGG~~aa~~~~~~l~~~l~~~~~~~---------------------------------------~~~~ 118 (270)
..++++|.+||||.|..+|-.++..+++.+...+.+. +..+
T Consensus 141 ~~~~~~~slfdghags~~avvAsrll~~hI~~ql~~vvd~i~~~~~~~~~~~g~~~~~s~~s~~~~~~~~ek~Ir~E~LV 220 (493)
T KOG1323|consen 141 RADGALFSLFDGHAGSAVAVVASRLLHRHIKEQLCEVVDTILHMDRHENLNFGKHRSESSYSMSEMSREDEKRIRHEHLV 220 (493)
T ss_pred CCcceeeeeecCCCcchHHHHHHHHHHHhhhHHHHHHHHHHhhhccccccccccccccCCcccccccchhhccCchHHhh
Confidence 4468999999999999999999999998887654311 0112
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCCCccCcCccEEEeEEECCEEEEEEcCCCcEEEEEEeccCCceEEEecCCCCCCC
Q 024219 119 ADVIRKAYQATEEGFMSLVTKQWPMKPQIAAVGSCCLVGVICGGTLYIANLGDSRAVLGRVVKATGEVLAIQLSTEHNAC 198 (270)
Q Consensus 119 ~~~i~~af~~~d~~~~~~~~~~~~~~~~~~~~GsTa~v~li~~~~l~vANvGDSRavl~r~~~~~~~~~~~~Lt~DH~~~ 198 (270)
.-+|+.||+.+|+.+-+.... |. ...|||+++++.--++|||||.|||||+|.|+ +...+||.+.+|
T Consensus 221 iGAlEsAFqemDeqiarer~~-~~-----~~GGCtalvvi~llGKlYvaNAGDsRAIlVrn------deirplS~efTP- 287 (493)
T KOG1323|consen 221 IGALESAFQEMDEQIARERQV-WR-----LPGGCTALVVIVLLGKLYVANAGDSRAILVRN------DEIRPLSKEFTP- 287 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHh-hc-----CCCCceEEEeeeeccceEEccCCCceEEEEec------CCeeecccccCc-
Confidence 458999999999988765332 21 45899999999999999999999999999998 899999999988
Q ss_pred CHHHHHHHHHcC---C------------------CC-CCeEEE-------------------------eCCeeecCCccc
Q 024219 199 IESVRQELQALH---P------------------DD-SQIVVL-------------------------KHNVWRVKGLIQ 231 (270)
Q Consensus 199 ~~~E~~RI~~~g---~------------------~~-~~~~~~-------------------------~~~~~rv~G~L~ 231 (270)
+.||+||+... | ++ ++.+.+ .....|+.+.|.
T Consensus 288 -etERqRlQ~Laf~~PeLlgneFtrLEfprRl~~~dLgqrvLyRD~~MtGWayKtve~~DLr~pLI~gegrkaRll~Tig 366 (493)
T KOG1323|consen 288 -ETERQRLQELAFRNPELLGNEFTRLEFPRRLTIKDLGQRVLYRDWNMTGWAYKTVEEEDLRFPLISGEGRKARLLATIG 366 (493)
T ss_pred -HHHHHHHHHHhhcChHhhcccccceecccccChhhhcceeeeeccccccceeehhhhhcCCcceecccchhhhhhhhhe
Confidence 88999999874 1 00 011111 011236778899
Q ss_pred cccccCcccccce---eeecCcEEEEecc-----------CCCeEEEE
Q 024219 232 VSLSLCRKWSCAI---VFLKAWIFIICAI-----------TSQFLYVA 265 (270)
Q Consensus 232 vSRs~GD~~~k~~---~~~~~~i~~~~~i-----------~~~~lila 265 (270)
|||.|||..+|-. ..++|+..++|++ +|+.+|+|
T Consensus 367 VsRGlGDH~Lkv~dsnl~iKPFLssvPeV~V~dl~q~e~~~DdVvila 414 (493)
T KOG1323|consen 367 VSRGLGDHHLKVVDSNLSIKPFLSSVPEVRVYDLRQYEHLTDDVVILA 414 (493)
T ss_pred eccccCcceeeeecCCcccchhhhcCCeeEEEehhhhccCCCcEEEEe
Confidence 9999999998854 4456655555443 77777776
No 13
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B ....
Probab=99.41 E-value=1.6e-12 Score=111.46 Aligned_cols=126 Identities=21% Similarity=0.264 Sum_probs=71.3
Q ss_pred ecCCCCCCCceeeecCccccccCCCCeEEEEEecCCCchHHHHHHHHHHHHHHHHhhhhcccchHHH-HHHHHHHHHHHH
Q 024219 55 VQANNLLEDQSQVESGSLSTHEFGPYGTFVGVYDGHGGPETSRYINDHLFQHLKRFTSDQQSMSADV-IRKAYQATEEGF 133 (270)
Q Consensus 55 ~~~r~~~ED~~~i~~~~~~~~~~~~~~~~fgVfDGHGG~~aa~~~~~~l~~~l~~~~~~~~~~~~~~-i~~af~~~d~~~ 133 (270)
.+.+.++||++.+.. .++..+++|+||+||...++.++..+...+.+.+.......... ....+..+.+++
T Consensus 6 ~~~~~~nqD~~~~~~--------~~~~~~~aVaDG~g~~~~~~~aa~~av~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 77 (212)
T PF13672_consen 6 RGRGAPNQDAFGIRT--------DDDGNLAAVADGVGGSPYGEEAAQLAVETFINYLKKLLSQESPSSIEALIRAIKKEI 77 (212)
T ss_dssp -TTSSS--EEEEEE---------TCCTCEEEEEEEESTTTHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCCCEEeee--------CCCCEEEEEEECCCCCchhHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHH
Confidence 456788999998632 23346779999999666655555555555554444332221111 233333333333
Q ss_pred HHHh------hhcCCCCCCccCcCccEEEeEEECCEEEEEEcCCCcEEEEEEeccCCceEEEecCCCCC
Q 024219 134 MSLV------TKQWPMKPQIAAVGSCCLVGVICGGTLYIANLGDSRAVLGRVVKATGEVLAIQLSTEHN 196 (270)
Q Consensus 134 ~~~~------~~~~~~~~~~~~~GsTa~v~li~~~~l~vANvGDSRavl~r~~~~~~~~~~~~Lt~DH~ 196 (270)
...+ ... .......+||++++++.+++++++|+||||+|+... .+....++.||+
T Consensus 78 ~~~~~~~~~~~~~---~~~~~~~~tTl~~~v~~~~~~~~~~iGD~~i~~~~~-----~g~~~~l~~~~~ 138 (212)
T PF13672_consen 78 LSIVRAFQSAKQA---DLELRDYGTTLLALVIDPDKVYIFNIGDSRIYVIRR-----NGEIQQLTDDHS 138 (212)
T ss_dssp HHHH----HHHHH---SGGGTT-EE-EEEEEEETTEEEEEEESS-EEEEEEE-----TTEEEE-S---B
T ss_pred HHHhhhhhhhhhc---cccccccCceEEEEEEECCEEEEEEECCCeEEEEEC-----CCEEEEcCCCcc
Confidence 3211 001 112356799999999999999999999999977655 488899999996
No 14
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.39 E-value=1.3e-12 Score=129.71 Aligned_cols=161 Identities=14% Similarity=0.188 Sum_probs=131.2
Q ss_pred eEEEEEecCCCchHHHHHHHHHHHHHHHHhhhhcccchHHHHHHHHHHHHHHHHHHhhhcCCCCCCccCcCccEEEeEEE
Q 024219 81 GTFVGVYDGHGGPETSRYINDHLFQHLKRFTSDQQSMSADVIRKAYQATEEGFMSLVTKQWPMKPQIAAVGSCCLVGVIC 160 (270)
Q Consensus 81 ~~~fgVfDGHGG~~aa~~~~~~l~~~l~~~~~~~~~~~~~~i~~af~~~d~~~~~~~~~~~~~~~~~~~~GsTa~v~li~ 160 (270)
.+.||.|||-+..+...+++..+..++.+..+.... ..+.|+.+|..+++++-+.-. .-|..++.+.|.
T Consensus 551 ~a~~g~~dgs~n~~v~~~vq~~ma~~L~eev~~~~~-et~~mr~~fl~~~rklg~~g~----------~lg~~~~~~~i~ 619 (1081)
T KOG0618|consen 551 QATFGCFDGSRNSRVLSLVQDTMASYLAEEVQLYGN-ETEQMRNTFLRLNRKLGEEGQ----------VLGGSVVLCQIV 619 (1081)
T ss_pred cceEEEEcCCCchhHHHHHHHHHHHHHHHHHHhccC-hHHHHHHHHHHHhhhhhhhhc----------cccchhhheeec
Confidence 478999999999999999999999999998887754 455599999999999854322 234444455554
Q ss_pred C--------CEEEEEEcCCCcEEEEEEeccCCceEEEecCCCC-CCCCHHHHHHHHHcCCCCCCeEEEeCCeeecCCccc
Q 024219 161 G--------GTLYIANLGDSRAVLGRVVKATGEVLAIQLSTEH-NACIESVRQELQALHPDDSQIVVLKHNVWRVKGLIQ 231 (270)
Q Consensus 161 ~--------~~l~vANvGDSRavl~r~~~~~~~~~~~~Lt~DH-~~~~~~E~~RI~~~g~~~~~~~~~~~~~~rv~G~L~ 231 (270)
. .++.+||+|+|.++++++ ++..++|+-. ...+++|.+||+..++ ++..++ +++|...
T Consensus 620 ~d~~~~asS~~l~~Anvg~c~avls~n------g~~~p~t~~~~~~v~~eE~~RI~~~~g-----~i~ed~--k~ngvt~ 686 (1081)
T KOG0618|consen 620 EDSLSPASSKTLFAANVGTCMAVLSRN------GKPLPTTRSPMLEVDREEYKRIVDSKG-----FITEDN--KLNGVTS 686 (1081)
T ss_pred ccccCcccchhhhHhhhccchhhhhhc------CCcCcccccccccCCHHHHHHHHHhcC-----eecCCC--eeeceee
Confidence 2 479999999999999998 7888887755 4559999999999984 444444 9999999
Q ss_pred cccccCcccccceeeecCcEEEEe-ccCCCeEEEE
Q 024219 232 VSLSLCRKWSCAIVFLKAWIFIIC-AITSQFLYVA 265 (270)
Q Consensus 232 vSRs~GD~~~k~~~~~~~~i~~~~-~i~~~~lila 265 (270)
.||++|-+++.|.+...|++..++ ...|+|+|+|
T Consensus 687 ~tR~iG~~~l~P~v~p~Phv~~~~Lt~qdE~LIvg 721 (1081)
T KOG0618|consen 687 STRAIGPFSLFPHVLPDPHVSVVILTEQDEFLIVG 721 (1081)
T ss_pred eeeecccccccccccCCCceeeEecccCceEEEEc
Confidence 999999999999999999998754 4699999997
No 15
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases.
Probab=98.98 E-value=9.1e-09 Score=86.80 Aligned_cols=102 Identities=17% Similarity=0.135 Sum_probs=74.6
Q ss_pred CCCCCCCceeeecCccccccCCCCeEEEEEecCCCchHHHHHHHHHHHHHHHHhhhhcccchHHHHHHHHHHHHHHHHHH
Q 024219 57 ANNLLEDQSQVESGSLSTHEFGPYGTFVGVYDGHGGPETSRYINDHLFQHLKRFTSDQQSMSADVIRKAYQATEEGFMSL 136 (270)
Q Consensus 57 ~r~~~ED~~~i~~~~~~~~~~~~~~~~fgVfDGHGG~~aa~~~~~~l~~~l~~~~~~~~~~~~~~i~~af~~~d~~~~~~ 136 (270)
....-.|.+.+. ...++..+|+|+||||+...|.+++..+...+.+..... . .+.+.+..+++.+...
T Consensus 13 ~~~~~GD~~~~~-------~~~~~~~~~~v~Dg~G~G~~aa~~s~~~~~~~~~~~~~~-~----~~~~~l~~~n~~l~~~ 80 (193)
T smart00331 13 ATQVGGDFYDVV-------KLPEGRLLIAIADVMGKGLAAALAMSMARSALRTLLSEG-I----SLSQILERLNRAIYEN 80 (193)
T ss_pred hHhcCccEEEEE-------EeCCCeEEEEEEecCCCChHHHHHHHHHHHHHHHHhhcC-C----CHHHHHHHHHHHHHhc
Confidence 344557777552 123336889999999988888888988888888765543 1 2455566667666543
Q ss_pred hhhcCCCCCCccCcCccEEEeEE--ECCEEEEEEcCCCcEEEEEE
Q 024219 137 VTKQWPMKPQIAAVGSCCLVGVI--CGGTLYIANLGDSRAVLGRV 179 (270)
Q Consensus 137 ~~~~~~~~~~~~~~GsTa~v~li--~~~~l~vANvGDSRavl~r~ 179 (270)
....+|+|++++++ .+++++++|+||+|+++.+.
T Consensus 81 ---------~~~~~~~T~~~~~id~~~~~l~~~~~Gd~~~~~~~~ 116 (193)
T smart00331 81 ---------GEDGMFATLFLALYDFAGGTLSYANAGHSPPYLLRA 116 (193)
T ss_pred ---------CCCCcEEEEEEEEEECCCCEEEEEeCCCCceEEEEC
Confidence 11457999999998 57899999999999999984
No 16
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=98.87 E-value=2.7e-08 Score=88.96 Aligned_cols=110 Identities=25% Similarity=0.279 Sum_probs=76.2
Q ss_pred CCCCCceeeecCccccccCCCCeEEEEEecCCCch-----HHHHHHHHHHHHHHHHhhhhc---ccchHHHHHHHHHHHH
Q 024219 59 NLLEDQSQVESGSLSTHEFGPYGTFVGVYDGHGGP-----ETSRYINDHLFQHLKRFTSDQ---QSMSADVIRKAYQATE 130 (270)
Q Consensus 59 ~~~ED~~~i~~~~~~~~~~~~~~~~fgVfDGHGG~-----~aa~~~~~~l~~~l~~~~~~~---~~~~~~~i~~af~~~d 130 (270)
+.=||+|++-. .+...+.||+||.||+ ..+.|.++.+- +..+..+.. ...+...|.+||.++-
T Consensus 89 ~~GEDa~Fvss--------~~~~~v~GVADGVGGWa~~GiDpg~fS~eLM~-~ce~~v~~~~~~~~~P~~lL~~ay~~l~ 159 (330)
T KOG1379|consen 89 KGGEDAWFVSS--------NPHAIVMGVADGVGGWAEYGIDPGAFSRELMS-NCERLVQNSDFNPSDPVNLLEKAYAELK 159 (330)
T ss_pred CCCCcceeecc--------CcccceEEEccccchHhhcCcCHHHHHHHHHH-HHHHHhcccccCCCChHHHHHHHHHHHh
Confidence 35689998832 2446789999999965 46666554443 333333222 2467778888876654
Q ss_pred HHHHHHhhhcCCCCCCccCcCccEEEeEEE--CCEEEEEEcCCCcEEEEEEeccCCceEEEecCCCC
Q 024219 131 EGFMSLVTKQWPMKPQIAAVGSCCLVGVIC--GGTLYIANLGDSRAVLGRVVKATGEVLAIQLSTEH 195 (270)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~GsTa~v~li~--~~~l~vANvGDSRavl~r~~~~~~~~~~~~Lt~DH 195 (270)
+. ..+.-.+|||+++++. +++||+||+|||-.++.|. +++++-|..+
T Consensus 160 ~~------------~~~~vGSSTAcI~~l~~~~~~Lh~aNLGDSGF~VvR~------G~vv~~S~~Q 208 (330)
T KOG1379|consen 160 SQ------------KVPIVGSSTACILALDRENGKLHTANLGDSGFLVVRE------GKVVFRSPEQ 208 (330)
T ss_pred hc------------CCCCCCcceeeeeeeecCCCeEEEeeccCcceEEEEC------CEEEEcCchh
Confidence 31 1124467888888887 8999999999999999997 8888777643
No 17
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=97.36 E-value=0.0023 Score=65.30 Aligned_cols=114 Identities=12% Similarity=0.044 Sum_probs=74.7
Q ss_pred CCCCCCCceeeecCccccccCCCCeEEEEEecCCCchHHHHHHHHHHHHHHHHhhhhcccchHHHHHHHHHHHHHHHHHH
Q 024219 57 ANNLLEDQSQVESGSLSTHEFGPYGTFVGVYDGHGGPETSRYINDHLFQHLKRFTSDQQSMSADVIRKAYQATEEGFMSL 136 (270)
Q Consensus 57 ~r~~~ED~~~i~~~~~~~~~~~~~~~~fgVfDGHGG~~aa~~~~~~l~~~l~~~~~~~~~~~~~~i~~af~~~d~~~~~~ 136 (270)
.+....|.+.+. ..++...+++|.||+|....|...+......+.+..... .+ ...++..++..+...
T Consensus 563 g~~vsGD~y~~~-------~l~~g~~~~~laDGmGhG~~Aa~~S~~~~~ll~~~~~~g-~~----~~~ai~~lN~~L~~~ 630 (764)
T TIGR02865 563 GELVSGDSYSFG-------KLSAGKYAVAISDGMGSGPEAAQESSACVRLLEKFLESG-FD----REVAIKTVNSILSLR 630 (764)
T ss_pred CCcccCceEEEE-------EECCCEEEEEEEcccCCCHHHHHHHHHHHHHHHHHHHcC-CC----HHHHHHHHHHHHHhC
Confidence 355678888652 123334789999999955555555666666665544322 12 244556666655322
Q ss_pred hhhcCCCCCCccCcCccEEEeEEE--CCEEEEEEcCCCcEEEEEEeccCCceEEEecCCCCCC
Q 024219 137 VTKQWPMKPQIAAVGSCCLVGVIC--GGTLYIANLGDSRAVLGRVVKATGEVLAIQLSTEHNA 197 (270)
Q Consensus 137 ~~~~~~~~~~~~~~GsTa~v~li~--~~~l~vANvGDSRavl~r~~~~~~~~~~~~Lt~DH~~ 197 (270)
. ...+.+|+.+++++ .+++.++|+|+++.++.+. +.+.+++..+-|
T Consensus 631 ~---------~~~~faTl~l~~IDl~~g~~~~~~aG~~p~~i~r~------~~v~~i~s~~lP 678 (764)
T TIGR02865 631 S---------TDEKFSTLDLSVIDLYTGQAEFVKVGAVPSFIKRG------AKVEVIRSSNLP 678 (764)
T ss_pred C---------CCCeEEEEEEEEEECCCCeEEEEecCCCceEEEEC------CEEEEecCCCce
Confidence 1 13468999999986 6899999999999998875 677777766544
No 18
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 3KE6_B 3ZT9_A 3RNR_A 3EQ2_A 3F7A_B 3F79_A 3ES2_B 3PU9_B 3T91_B 3T9Q_B ....
Probab=97.27 E-value=0.0067 Score=50.62 Aligned_cols=87 Identities=17% Similarity=0.125 Sum_probs=58.9
Q ss_pred CeEEEEEecCCCchHHHHHHHHHHHHHHHHhhhhcccchHHHHHHHHHHHHHHHHHHhhhcCCCCCCccCcCccEEEeEE
Q 024219 80 YGTFVGVYDGHGGPETSRYINDHLFQHLKRFTSDQQSMSADVIRKAYQATEEGFMSLVTKQWPMKPQIAAVGSCCLVGVI 159 (270)
Q Consensus 80 ~~~~fgVfDGHGG~~aa~~~~~~l~~~l~~~~~~~~~~~~~~i~~af~~~d~~~~~~~~~~~~~~~~~~~~GsTa~v~li 159 (270)
+..++.|.|+.|-.-.|.+.+..+...+........ . ..+.+..+++.+...... ....+|++++.+
T Consensus 3 ~~~~~~v~D~~GhG~~aa~~~~~~~~~~~~~~~~~~-~----p~~~l~~ln~~l~~~~~~--------~~~~~t~~~~~~ 69 (193)
T PF07228_consen 3 GRYFIIVGDVSGHGVSAALLSAALASAIRELLDEGL-D----PEELLEALNRRLYRDLKG--------DNRYATACYAII 69 (193)
T ss_dssp TEEEEEEEEESSSSHHHHHHHHHHHHHHHHHHHTTT-S----HHHHHHHHHHHHHHHTTT--------TSTTEEEEEEEE
T ss_pred CEEEEEEEEecCCCHHHHHHHHHHHHHHHHHHHcCC-C----HHHHHHHHHHHHHHHhhh--------ccccceEEEEEe
Confidence 357899999999545555556666666666553332 2 444455566666443321 136788888887
Q ss_pred E--CCEEEEEEcCCCcEEEEEE
Q 024219 160 C--GGTLYIANLGDSRAVLGRV 179 (270)
Q Consensus 160 ~--~~~l~vANvGDSRavl~r~ 179 (270)
. .++++++|+|++++++++.
T Consensus 70 d~~~~~l~~~~aG~~~~l~~~~ 91 (193)
T PF07228_consen 70 DPETGTLTYANAGHPPPLLLRP 91 (193)
T ss_dssp ETTTTEEEEEEESSSEEEEEET
T ss_pred cccceEEEEeCCCCCCEEEEec
Confidence 6 5689999999999999986
No 19
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=27.37 E-value=84 Score=18.51 Aligned_cols=18 Identities=28% Similarity=0.495 Sum_probs=14.4
Q ss_pred CCEEEEEEcCCCcEEEEE
Q 024219 161 GGTLYIANLGDSRAVLGR 178 (270)
Q Consensus 161 ~~~l~vANvGDSRavl~r 178 (270)
+++|||+|-|+..+.++.
T Consensus 3 ~~~lyv~~~~~~~v~~id 20 (42)
T TIGR02276 3 GTKLYVTNSGSNTVSVID 20 (42)
T ss_pred CCEEEEEeCCCCEEEEEE
Confidence 567999999888877765
No 20
>PF05785 CNF1: Rho-activating domain of cytotoxic necrotizing factor; InterPro: IPR008430 This entry represents several bacterial cytotoxic necrotizing factor proteins as well as related dermonecrotic toxin (DNT) from Bordetella species. Cytotoxic necrotizing factor 1 (CNF1) is a toxin whose structure from Escherichia coli revealed a 4-layer alpha/beta/beta/alpha structure containing mixed beta-sheets []. CNF1 is expressed in strains of E. coli causing uropathogenic and neonatal meningitis. CNF1 alters host cell actin cytoskeleton and promotes bacterial invasion of the blood-brain barrier endothelial cells []. CNF1 belongs to a unique group of large cytotoxins that cause constitutive activation of Rho guanosine triphosphatases (GTPases), which are key regulators of the actin cytoskeleton []. Bordetella dermonecrotic toxin (DNT) stimulates the assembly of actin stress fibres and focal adhesions by deamidating or polyaminating Gln63 of the small GTPase Rho. DNT is an A-B toxin composed of an N-terminal receptor-binding (B) domain and a C-terminal enzymatically active (A) domain [].; PDB: 1HZG_A 1HQ0_A.
Probab=26.42 E-value=70 Score=28.82 Aligned_cols=24 Identities=21% Similarity=0.239 Sum_probs=18.4
Q ss_pred cCcCccEEEeEEECCEEEEEEcCCC
Q 024219 148 AAVGSCCLVGVICGGTLYIANLGDS 172 (270)
Q Consensus 148 ~~~GsTa~v~li~~~~l~vANvGDS 172 (270)
..+|||.+++ ++++.+|..|+|-+
T Consensus 130 ~LSGCT~i~A-~K~~~~y~~HtGk~ 153 (281)
T PF05785_consen 130 ALSGCTMIYA-RKDNYFYAYHTGKS 153 (281)
T ss_dssp -BSS-EEEEE-EETTEEEEEEEEES
T ss_pred ccCCCEEEEE-EcCCeEEEEEcCCC
Confidence 4578887765 78999999999976
No 21
>PRK09781 hypothetical protein; Provisional
Probab=20.96 E-value=2.7e+02 Score=22.54 Aligned_cols=51 Identities=16% Similarity=0.104 Sum_probs=35.1
Q ss_pred cceecCCCCcceeeEeeeeecCCCCCCCceeeecCccccccCCCCeEEEEEecCCC-chHHHHHHHHHHHH
Q 024219 36 LLWYKDSGHHVSGEFSMAVVQANNLLEDQSQVESGSLSTHEFGPYGTFVGVYDGHG-GPETSRYINDHLFQ 105 (270)
Q Consensus 36 ~~w~~d~~~~~~~~~~~a~~~~r~~~ED~~~i~~~~~~~~~~~~~~~~fgVfDGHG-G~~aa~~~~~~l~~ 105 (270)
.+|--+..+++..+.+|..+ .||.++. +.|.|.||-| |+.-+-...+.+.+
T Consensus 80 ~TWLP~FFP~~A~~I~~~~N-----~~~~~F~--------------s~FS~~~~D~r~~F~~~L~~E~V~~ 131 (181)
T PRK09781 80 WTWLPVFFPSSASEIEMTFN-----LDSNLFY--------------ADFSVADGDKRAHFESVLGEESVVH 131 (181)
T ss_pred EEeccccCcccceeEEEEEe-----ccCceEE--------------EEEEeecCCccchHHhhhhhhhhhh
Confidence 57888888888888887643 4666644 6799999999 76555554444333
Done!