BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024224
(270 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3IXC|A Chain A, Crystal Structure Of Hexapeptide Transferase Family
Protein From Anaplasma Phagocytophilum
Length = 191
Score = 172 bits (436), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 116/161 (72%), Gaps = 5/161 (3%)
Query: 52 APAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKS 111
+P+VD AF+A +A IIGDV +G+ +SIWYG VLRGDV+ I VG GTNIQDN++VH
Sbjct: 33 SPSVDSTAFIAGNARIIGDVCIGKNASIWYGTVLRGDVDKIEVGEGTNIQDNTVVHT--D 90
Query: 112 NLSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQ 171
++ G T IG VT+GHS +LH CT+ + AFVGMG+ ++D V+E M+AAGSL+ +
Sbjct: 91 SMHGD---TVIGKFVTIGHSCILHACTLGNNAFVGMGSIVMDRAVMEEGSMLAAGSLLTR 147
Query: 172 NTRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNLAQ 212
+ SGE+W G PAKFLR +T+EEI ++ +SA NY L++
Sbjct: 148 GKIVKSGELWAGRPAKFLRMMTEEEILYLQKSAENYIALSR 188
>pdb|3TIO|A Chain A, Crystal Structures Of Yrda From Escherichia Coli, A
Homologous Protein Of Gamma-Class Carbonic Anhydrase,
Show Possible Allosteric Conformations
pdb|3TIO|B Chain B, Crystal Structures Of Yrda From Escherichia Coli, A
Homologous Protein Of Gamma-Class Carbonic Anhydrase,
Show Possible Allosteric Conformations
pdb|3TIO|C Chain C, Crystal Structures Of Yrda From Escherichia Coli, A
Homologous Protein Of Gamma-Class Carbonic Anhydrase,
Show Possible Allosteric Conformations
pdb|3TIO|D Chain D, Crystal Structures Of Yrda From Escherichia Coli, A
Homologous Protein Of Gamma-Class Carbonic Anhydrase,
Show Possible Allosteric Conformations
pdb|3TIO|E Chain E, Crystal Structures Of Yrda From Escherichia Coli, A
Homologous Protein Of Gamma-Class Carbonic Anhydrase,
Show Possible Allosteric Conformations
pdb|3TIO|F Chain F, Crystal Structures Of Yrda From Escherichia Coli, A
Homologous Protein Of Gamma-Class Carbonic Anhydrase,
Show Possible Allosteric Conformations
pdb|3TIS|A Chain A, Crystal Structures Of Yrda From Escherichia Coli, A
Homologous Protein Of Gamma-Class Carbonic Anhydrases,
Show Possible Allosteric Conformations
pdb|3TIS|B Chain B, Crystal Structures Of Yrda From Escherichia Coli, A
Homologous Protein Of Gamma-Class Carbonic Anhydrases,
Show Possible Allosteric Conformations
pdb|3TIS|C Chain C, Crystal Structures Of Yrda From Escherichia Coli, A
Homologous Protein Of Gamma-Class Carbonic Anhydrases,
Show Possible Allosteric Conformations
Length = 183
Score = 141 bits (355), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 73/159 (45%), Positives = 104/159 (65%), Gaps = 1/159 (0%)
Query: 50 DKAPAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVA 109
D P + + + S+ +IGDV++ IW V+RGDV+ + +G+ TNIQD S++HV
Sbjct: 9 DLFPQIGQRVMIDDSSVVIGDVRLADDVGIWPLVVIRGDVHYVQIGARTNIQDGSMLHVT 68
Query: 110 -KSNLSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSL 168
KS+ + P TIG++VTVGH +LHGCT+ + VGMG+ LLDG +VE M+ AGSL
Sbjct: 69 HKSSYNPDGNPLTIGEDVTVGHKVMLHGCTIGNRVLVGMGSILLDGAIVEDDVMIGAGSL 128
Query: 169 VRQNTRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNY 207
V QN R+ SG ++ G+P K +R L+DEE A + SA NY
Sbjct: 129 VPQNKRLESGYLYLGSPVKQIRPLSDEEKAGLRYSANNY 167
>pdb|3R3R|A Chain A, Structure Of The Yrda Ferripyochelin Binding Protein From
Salmonella Enterica
Length = 187
Score = 134 bits (337), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 71/168 (42%), Positives = 106/168 (63%), Gaps = 8/168 (4%)
Query: 43 RTLMNIFDKAPAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQD 102
R N+F P + + + S+ +IGDV++ IW V+RGDVN +++G+ TNIQD
Sbjct: 9 RPYKNLF---PGIGQRVMIDTSSVVIGDVRLADDVGIWPLVVIRGDVNYVAIGARTNIQD 65
Query: 103 NSLVHV---AKSNLSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVER 159
S++HV + SN G P IG++VTVGH +LHGCT+ + VGMG+ +LDG ++E
Sbjct: 66 GSVLHVTHKSSSNPHGN--PLIIGEDVTVGHKVMLHGCTIGNRVLVGMGSIVLDGAIIED 123
Query: 160 HGMVAAGSLVRQNTRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNY 207
M+ AGSLV Q+ R+ SG ++ G+P K +R L+D E + + SA NY
Sbjct: 124 DVMIGAGSLVPQHKRLESGYLYLGSPVKQIRPLSDAERSGLQYSANNY 171
>pdb|3R1W|A Chain A, Crystal Structure Of A Carbonic Anhydrase From A Crude Oil
Degrading Psychrophilic Library
pdb|3R1W|B Chain B, Crystal Structure Of A Carbonic Anhydrase From A Crude Oil
Degrading Psychrophilic Library
pdb|3R1W|C Chain C, Crystal Structure Of A Carbonic Anhydrase From A Crude Oil
Degrading Psychrophilic Library
Length = 189
Score = 133 bits (334), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 111/180 (61%), Gaps = 4/180 (2%)
Query: 39 LSRHRTLMNIFDKAPAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGT 98
L+ RT I +P + + FV S+ IIGDV++G S+W V+RGD++ I +G+ T
Sbjct: 9 LTSVRTYQGI---SPKLGERVFVDRSSVIIGDVELGDDCSVWPLAVIRGDMHHIRIGART 65
Query: 99 NIQDNSLVHVAK-SNLSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVV 157
++QD S++H+ S+ + P IGD+VT+GH A+LHGCT+ + +GM + ++DG +V
Sbjct: 66 SVQDGSVLHITHASDYNPGGYPLIIGDDVTIGHQAMLHGCTIGNRVLIGMKSMIMDGAIV 125
Query: 158 ERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNLAQVHAAE 217
E +VAAG+ V + SG V+ G PAK +R +T++E +F + A NY L H AE
Sbjct: 126 EDEVIVAAGATVSPGKVLESGFVYMGTPAKKVRPITEKERSFFTYGAGNYVRLKDKHLAE 185
>pdb|1V3W|A Chain A, Structure Of Ferripyochelin Binding Protein From
Pyrococcus Horikoshii Ot3
pdb|1V67|A Chain A, Structure Of Ferripyochelin Binding Protein From
Pyrococcus Horikoshii Ot3
pdb|2FKO|A Chain A, Structure Of Ph1591 From Pyrococcus Horikoshii Ot3
Length = 173
Score = 121 bits (303), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 98/170 (57%), Gaps = 6/170 (3%)
Query: 45 LMNIFDKAPAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNS 104
+ I K P + AFV +A +IGDV + +S+W VLRGD+ I VG +N+QDN
Sbjct: 3 IYEINGKKPRIHPSAFVDENAVVIGDVVLEEKTSVWPSAVLRGDIEQIYVGKYSNVQDNV 62
Query: 105 LVHVAKSNLSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVA 164
+H + PT IG+ VT+GH+A++HG V + +G+ + +LDG + H ++
Sbjct: 63 SIHTSHG------YPTEIGEYVTIGHNAMVHGAKVGNYVIIGISSVILDGAKIGDHVIIG 116
Query: 165 AGSLVRQNTRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNLAQVH 214
AG++V N IP + G P K +R+LT+EEI + ++A Y LA+ H
Sbjct: 117 AGAVVPPNKEIPDYSLVLGVPGKVVRQLTEEEIEWTKKNAEIYVELAEKH 166
>pdb|3VNP|A Chain A, Crystal Structure Of Hypothetical Protein (Gk2848) From
Geobacillus Kaustophilus
pdb|3VNP|B Chain B, Crystal Structure Of Hypothetical Protein (Gk2848) From
Geobacillus Kaustophilus
pdb|3VNP|C Chain C, Crystal Structure Of Hypothetical Protein (Gk2848) From
Geobacillus Kaustophilus
Length = 183
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 91/166 (54%), Gaps = 6/166 (3%)
Query: 51 KAPAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAK 110
K P + AF+A +I GDV +G +SIW+ V+RGDV +G+ NIQDNS++H +
Sbjct: 9 KTPQIAASAFIADYVTITGDVVIGEETSIWFNTVIRGDVAPTVIGNRVNIQDNSILHQSP 68
Query: 111 SNLSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVR 170
+N P I D VTVGH +LH V A +GMG+ +LD + + AGSLV
Sbjct: 69 NN------PLIIEDGVTVGHQVILHSAIVRKNALIGMGSIILDRAEIGEGAFIGAGSLVP 122
Query: 171 QNTRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNLAQVHAA 216
+IP + G PAK +R+LT+++I + + Y Q + A
Sbjct: 123 PGKKIPPNTLALGRPAKVVRELTEDDIREMERIRREYVEKGQYYKA 168
>pdb|1XHD|A Chain A, X-Ray Crystal Structure Of Putative Acetyltransferase,
Product Of Bc4754 Gene [bacillus Cereus]
Length = 173
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 90/167 (53%), Gaps = 6/167 (3%)
Query: 50 DKAPAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVA 109
+K P + AF+A +I GDV VG SSIW+ V+RGDV+ +G N+QD +H +
Sbjct: 10 EKKPKIASSAFIADYVTITGDVYVGEESSIWFNTVIRGDVSPTIIGDRVNVQDQCTLHQS 69
Query: 110 KSNLSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLV 169
P + D+VTVGH +LH C ++ +A +G G+ +LDG + + AGSLV
Sbjct: 70 PQ------YPLILEDDVTVGHQVILHSCHIKKDALIGXGSIILDGAEIGEGAFIGAGSLV 123
Query: 170 RQNTRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNLAQVHAA 216
Q +IP + G PAK +R+LT E+ + T Y Q + +
Sbjct: 124 SQGKKIPPNTLAFGRPAKVIRELTAEDRKDXERIRTQYVEKGQYYKS 170
>pdb|3OU9|A Chain A, Crystal Structure Of Gamma-Carbonic Anhydrase W19f Mutant
From Methanosarcina Thermophila
Length = 213
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 88/198 (44%), Gaps = 25/198 (12%)
Query: 44 TLMNIFDKAPAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVN-SISVGSGTNIQD 102
T N AP +D A++ P AS+IG+V +G + +R D I VG +N+QD
Sbjct: 17 TPFNPEPSAPVIDPTAYIDPQASVIGEVTIGANVMVSPMASIRSDEGMPIFVGDRSNVQD 76
Query: 103 NSLVHVAKS-------------NLSGKVLPTTIGDNVTVGHSAVLHG-CTVEDEAFVGMG 148
++H ++ + GK IG+NV++ H + +HG V D+ F+GM
Sbjct: 77 GVVLHALETINEEGEPIEDNIVEVDGKEYAVYIGNNVSLAHQSQVHGPAAVGDDTFIGMQ 136
Query: 149 ATLL-----DGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNP-AKFLRKLTDEEIAFISQ 202
A + + V+E A G + IP+G V A L ++TD+ +
Sbjct: 137 AFVFKSKVGNNCVLEPRS-AAIGVTIPDGRYIPAGMVVTSQAEADKLPEVTDDYAYSHTN 195
Query: 203 SATNYSNLAQVHAAENAK 220
A Y N VH AE K
Sbjct: 196 EAVVYVN---VHLAEGYK 210
>pdb|3OTZ|A Chain A, Crystal Structure Of Gamma-Carbonic Anhydrase W19a Mutant
From Metanosarcina Thermophila
Length = 213
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 88/198 (44%), Gaps = 25/198 (12%)
Query: 44 TLMNIFDKAPAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVN-SISVGSGTNIQD 102
T N AP +D A++ P AS+IG+V +G + +R D I VG +N+QD
Sbjct: 17 TPANPEPSAPVIDPTAYIDPQASVIGEVTIGANVMVSPMASIRSDEGMPIFVGDRSNVQD 76
Query: 103 NSLVHVAKS-------------NLSGKVLPTTIGDNVTVGHSAVLHG-CTVEDEAFVGMG 148
++H ++ + GK IG+NV++ H + +HG V D+ F+GM
Sbjct: 77 GVVLHALETINEEGEPIEDNIVEVDGKEYAVYIGNNVSLAHQSQVHGPAAVGDDTFIGMQ 136
Query: 149 ATLL-----DGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNP-AKFLRKLTDEEIAFISQ 202
A + + V+E A G + IP+G V A L ++TD+ +
Sbjct: 137 AFVFKSKVGNNCVLEPRS-AAIGVTIPDGRYIPAGMVVTSQAEADKLPEVTDDYAYSHTN 195
Query: 203 SATNYSNLAQVHAAENAK 220
A Y N VH AE K
Sbjct: 196 EAVVYVN---VHLAEGYK 210
>pdb|1THJ|A Chain A, Carbonic Anhydrase From Methanosarcina
pdb|1THJ|B Chain B, Carbonic Anhydrase From Methanosarcina
pdb|1THJ|C Chain C, Carbonic Anhydrase From Methanosarcina
Length = 214
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 88/198 (44%), Gaps = 25/198 (12%)
Query: 44 TLMNIFDKAPAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVN-SISVGSGTNIQD 102
T N AP +D A++ P AS+IG+V +G + +R D I VG +N+QD
Sbjct: 18 TPWNPEPSAPVIDPTAYIDPEASVIGEVTIGANVMVSPMASIRSDEGMPIFVGDRSNVQD 77
Query: 103 NSLVHVAKS-------------NLSGKVLPTTIGDNVTVGHSAVLHG-CTVEDEAFVGMG 148
++H ++ + GK IG+NV++ H + +HG V D+ F+GM
Sbjct: 78 GVVLHALETINEEGEPIEDNIVEVDGKEYAVYIGNNVSLAHQSQVHGPAAVGDDTFIGMQ 137
Query: 149 ATLL-----DGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNP-AKFLRKLTDEEIAFISQ 202
A + + V+E A G + IP+G V A L ++TD+ +
Sbjct: 138 AFVFKSKVGNNCVLEPRS-AAIGVTIPDGRYIPAGMVVTSQAEADKLPEVTDDYAYSHTN 196
Query: 203 SATNYSNLAQVHAAENAK 220
A Y N VH AE K
Sbjct: 197 EAVVYVN---VHLAEGYK 211
>pdb|1QRL|A Chain A, A Closer Look At The Active Site Of Gamma-Carbonic
Anhydrases: High Resolution Crystallographic Studies Of
The Carbonic Anhydrase From Methanosarcina Thermophila
Length = 214
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 88/198 (44%), Gaps = 25/198 (12%)
Query: 44 TLMNIFDKAPAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVN-SISVGSGTNIQD 102
T N AP +D A++ P AS+IG+V +G + +R D I VG +N+QD
Sbjct: 18 TPWNPEPSAPVIDPTAYIDPQASVIGEVTIGANVMVSPMASIRSDEGMPIFVGDRSNVQD 77
Query: 103 NSLVHVAKS-------------NLSGKVLPTTIGDNVTVGHSAVLHG-CTVEDEAFVGMG 148
++H ++ + GK IG+NV++ H + +HG V D+ F+GM
Sbjct: 78 GVVLHALETINEEGEPIEDNIVEVDGKEYAVYIGNNVSLAHQSQVHGPAAVGDDTFIGMQ 137
Query: 149 ATLL-----DGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNP-AKFLRKLTDEEIAFISQ 202
A + + V+E A G + IP+G V A L ++TD+ +
Sbjct: 138 AFVFKSKVGNNCVLEPRS-AAIGVTIPDGRYIPAGMVVTSQAEADKLPEVTDDYAYSHTN 196
Query: 203 SATNYSNLAQVHAAENAK 220
A Y N VH AE K
Sbjct: 197 EAVVYVN---VHLAEGYK 211
>pdb|1QRF|A Chain A, A Closer Look At The Active Site Of Gamma-Carbonic
Anhydrases: High Resolution Crystallographic Studies Of
The Carbonic Anhydrase From Methanosarcina Thermophila
pdb|1QRG|A Chain A, A Closer Look And The Active Site Of Gamma-Carbonic
Anhydrases: High Resolution Crystallographic Studies Of
The Carbonic Anhydrase From Methanosarcina Thermophila
pdb|1QRM|A Chain A, A Closer Look At The Active Site Of Gamma-carbonic
Anhydrases: High Resolution Crystal Structures Of The
Carbonic Anhydrase From Methanosarcina Thermophila
Length = 213
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 88/198 (44%), Gaps = 25/198 (12%)
Query: 44 TLMNIFDKAPAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVN-SISVGSGTNIQD 102
T N AP +D A++ P AS+IG+V +G + +R D I VG +N+QD
Sbjct: 17 TPWNPEPSAPVIDPTAYIDPQASVIGEVTIGANVMVSPMASIRSDEGMPIFVGDRSNVQD 76
Query: 103 NSLVHVAKS-------------NLSGKVLPTTIGDNVTVGHSAVLHG-CTVEDEAFVGMG 148
++H ++ + GK IG+NV++ H + +HG V D+ F+GM
Sbjct: 77 GVVLHALETINEEGEPIEDNIVEVDGKEYAVYIGNNVSLAHQSQVHGPAAVGDDTFIGMQ 136
Query: 149 ATLL-----DGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNP-AKFLRKLTDEEIAFISQ 202
A + + V+E A G + IP+G V A L ++TD+ +
Sbjct: 137 AFVFKSKVGNNCVLEPRS-AAIGVTIPDGRYIPAGMVVTSQAEADKLPEVTDDYAYSHTN 195
Query: 203 SATNYSNLAQVHAAENAK 220
A Y N VH AE K
Sbjct: 196 EAVVYVN---VHLAEGYK 210
>pdb|1QQ0|A Chain A, Cobalt Substituted Carbonic Anhydrase From Methanosarcina
Thermophila
pdb|1QRE|A Chain A, A Closer Look At The Active Site Of Gamma-Carbonic
Anhydrases: High Resolution Crystallographic Studies Of
The Carbonic Anhydrase From Methanosarcina Thermophila
Length = 247
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 88/198 (44%), Gaps = 25/198 (12%)
Query: 44 TLMNIFDKAPAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVN-SISVGSGTNIQD 102
T N AP +D A++ P AS+IG+V +G + +R D I VG +N+QD
Sbjct: 51 TPWNPEPSAPVIDPTAYIDPQASVIGEVTIGANVMVSPMASIRSDEGMPIFVGDRSNVQD 110
Query: 103 NSLVHVAKS-------------NLSGKVLPTTIGDNVTVGHSAVLHG-CTVEDEAFVGMG 148
++H ++ + GK IG+NV++ H + +HG V D+ F+GM
Sbjct: 111 GVVLHALETINEEGEPIEDNIVEVDGKEYAVYIGNNVSLAHQSQVHGPAAVGDDTFIGMQ 170
Query: 149 ATLL-----DGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNP-AKFLRKLTDEEIAFISQ 202
A + + V+E A G + IP+G V A L ++TD+ +
Sbjct: 171 AFVFKSKVGNNCVLEPRS-AAIGVTIPDGRYIPAGMVVTSQAEADKLPEVTDDYAYSHTN 229
Query: 203 SATNYSNLAQVHAAENAK 220
A Y N VH AE K
Sbjct: 230 EAVVYVN---VHLAEGYK 244
>pdb|3OTM|A Chain A, Crystal Structures Of Wild-Type Gamma-Carbonic Anhydrase
From Methanosarcina Thermophila
Length = 212
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 88/198 (44%), Gaps = 25/198 (12%)
Query: 44 TLMNIFDKAPAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVN-SISVGSGTNIQD 102
T N AP +D A++ P AS+IG+V +G + +R D I VG +N+QD
Sbjct: 16 TPWNPEPSAPVIDPTAYIDPQASVIGEVTIGANVMVSPMASIRSDEGMPIFVGDRSNVQD 75
Query: 103 NSLVHVAKS-------------NLSGKVLPTTIGDNVTVGHSAVLHG-CTVEDEAFVGMG 148
++H ++ + GK IG+NV++ H + +HG V D+ F+GM
Sbjct: 76 GVVLHALETINEEGEPIEDNIVEVDGKEYAVYIGNNVSLAHQSQVHGPAAVGDDTFIGMQ 135
Query: 149 ATLL-----DGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNP-AKFLRKLTDEEIAFISQ 202
A + + V+E A G + IP+G V A L ++TD+ +
Sbjct: 136 AFVFKSKVGNNCVLEPRS-AAIGVTIPDGRYIPAGMVVTSQAEADKLPEVTDDYAYSHTN 194
Query: 203 SATNYSNLAQVHAAENAK 220
A Y N VH AE K
Sbjct: 195 EAVVYVN---VHLAEGYK 209
>pdb|3OUP|A Chain A, Crystal Structure Of The Gamma-Carbonic Anhydrase W19n
Mutant From Methanosarcina Thermophila
Length = 213
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 88/198 (44%), Gaps = 25/198 (12%)
Query: 44 TLMNIFDKAPAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVN-SISVGSGTNIQD 102
T N AP +D A++ P AS+IG+V +G + +R D I VG +N+QD
Sbjct: 17 TPNNPEPSAPVIDPTAYIDPQASVIGEVTIGANVMVSPMASIRSDEGMPIFVGDRSNVQD 76
Query: 103 NSLVHVAKS-------------NLSGKVLPTTIGDNVTVGHSAVLHG-CTVEDEAFVGMG 148
++H ++ + GK IG+NV++ H + +HG V D+ F+GM
Sbjct: 77 GVVLHALETINEEGEPIEDNIVEVDGKEYAVYIGNNVSLAHQSQVHGPAAVGDDTFIGMQ 136
Query: 149 ATLL-----DGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNP-AKFLRKLTDEEIAFISQ 202
A + + V+E A G + IP+G V A L ++TD+ +
Sbjct: 137 AFVFKSKVGNNCVLEPRS-AAIGVTIPDGRYIPAGMVVTSQAEADKLPEVTDDYAYSHTN 195
Query: 203 SATNYSNLAQVHAAENAK 220
A Y N VH AE K
Sbjct: 196 EAVVYVN---VHLAEGYK 210
>pdb|3OW5|A Chain A, Crystal Structure Of The Y200a Mutant Of Gamma Carbonic
Anhydrase From Methanosarcina Thermophila
Length = 213
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 91/199 (45%), Gaps = 27/199 (13%)
Query: 44 TLMNIFDKAPAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVN-SISVGSGTNIQD 102
T N AP +D A++ P AS+IG+V +G + +R D I VG +N+QD
Sbjct: 17 TPWNPEPSAPVIDPTAYIDPQASVIGEVTIGANVMVSPMASIRSDEGMPIFVGDRSNVQD 76
Query: 103 NSLVHVAKS-------------NLSGKVLPTTIGDNVTVGHSAVLHG-CTVEDEAFVGMG 148
++H ++ + GK IG+NV++ H + +HG V D+ F+GM
Sbjct: 77 GVVLHALETINEEGEPIEDNIVEVDGKEYAVYIGNNVSLAHQSQVHGPAAVGDDTFIGMQ 136
Query: 149 ATLL-----DGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNP-AKFLRKLTDEEIAFISQ 202
A + + V+E A G + IP+G V A L ++TD+ +
Sbjct: 137 AFVFKSKVGNNCVLEPRS-AAIGVTIPDGRYIPAGMVVTSQAEADKLPEVTDD----YAY 191
Query: 203 SATNYSNLA-QVHAAENAK 220
S TN + +A VH AE K
Sbjct: 192 SHTNEAVVAVNVHLAEGYK 210
>pdb|3KWC|A Chain A, Oxidized, Active Structure Of The Beta-carboxysomal
Gamma-carbonic Anhydrase, Ccmm
pdb|3KWC|B Chain B, Oxidized, Active Structure Of The Beta-carboxysomal
Gamma-carbonic Anhydrase, Ccmm
pdb|3KWC|C Chain C, Oxidized, Active Structure Of The Beta-carboxysomal
Gamma-carbonic Anhydrase, Ccmm
pdb|3KWC|D Chain D, Oxidized, Active Structure Of The Beta-carboxysomal
Gamma-carbonic Anhydrase, Ccmm
pdb|3KWC|E Chain E, Oxidized, Active Structure Of The Beta-carboxysomal
Gamma-carbonic Anhydrase, Ccmm
pdb|3KWC|F Chain F, Oxidized, Active Structure Of The Beta-carboxysomal
Gamma-carbonic Anhydrase, Ccmm
Length = 229
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 67/133 (50%), Gaps = 8/133 (6%)
Query: 53 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNS-ISVGSGTNIQDNSLVHVAKS 111
P + A+V +++IGDV++ I G +R D + +GS TNIQD ++H +
Sbjct: 40 PEIAPTAYVHSFSNLIGDVRIKDYVHIAPGTSIRADEGTPFHIGSRTNIQDGVVIHGLQQ 99
Query: 112 NL----SGKVLPTTIGDNVTVGHSAVLHG-CTVEDEAFVGMGATLLDGVVVERHGMVAAG 166
G+ IGDNV++ H A++HG + D F+G +T+ + V G V
Sbjct: 100 GRVIGDDGQEYSVWIGDNVSITHMALIHGPAYIGDGCFIGFRSTVFNARVGA--GCVVMM 157
Query: 167 SLVRQNTRIPSGE 179
++ Q+ IP G+
Sbjct: 158 HVLIQDVEIPPGK 170
>pdb|3KWD|A Chain A, Inactive Truncation Of The Beta-Carboxysomal
Gamma-Carbonic Anhydrase, Ccmm, Form 1
pdb|3KWE|A Chain A, Inactive Truncation Of The Beta-Carboxysomal
Gamma-Carbonic Anhydrase, Ccmm, Form 2
Length = 213
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 67/133 (50%), Gaps = 8/133 (6%)
Query: 53 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNS-ISVGSGTNIQDNSLVHVAKS 111
P + A+V +++IGDV++ I G +R D + +GS TNIQD ++H +
Sbjct: 40 PEIAPTAYVHSFSNLIGDVRIKDYVHIAPGTSIRADEGTPFHIGSRTNIQDGVVIHGLQQ 99
Query: 112 NL----SGKVLPTTIGDNVTVGHSAVLHG-CTVEDEAFVGMGATLLDGVVVERHGMVAAG 166
G+ IGDNV++ H A++HG + D F+G +T+ + V G V
Sbjct: 100 GRVIGDDGQEYSVWIGDNVSITHMALIHGPAYIGDGCFIGFRSTVFNARVGA--GCVVMM 157
Query: 167 SLVRQNTRIPSGE 179
++ Q+ IP G+
Sbjct: 158 HVLIQDVEIPPGK 170
>pdb|3ECT|A Chain A, Crystal Structure Of The Hexapeptide-repeat Containing-
Acetyltransferase Vca0836 From Vibrio Cholerae
pdb|3NZ2|A Chain A, Crystal Structure Of Hexapeptide-Repeat
Containing-Acetyltransferase Vca0836 Complexed With
Acetyl Co Enzyme A From Vibrio Cholerae O1 Biovar Eltor
pdb|3NZ2|B Chain B, Crystal Structure Of Hexapeptide-Repeat
Containing-Acetyltransferase Vca0836 Complexed With
Acetyl Co Enzyme A From Vibrio Cholerae O1 Biovar Eltor
pdb|3NZ2|C Chain C, Crystal Structure Of Hexapeptide-Repeat
Containing-Acetyltransferase Vca0836 Complexed With
Acetyl Co Enzyme A From Vibrio Cholerae O1 Biovar Eltor
pdb|3NZ2|D Chain D, Crystal Structure Of Hexapeptide-Repeat
Containing-Acetyltransferase Vca0836 Complexed With
Acetyl Co Enzyme A From Vibrio Cholerae O1 Biovar Eltor
pdb|3NZ2|E Chain E, Crystal Structure Of Hexapeptide-Repeat
Containing-Acetyltransferase Vca0836 Complexed With
Acetyl Co Enzyme A From Vibrio Cholerae O1 Biovar Eltor
pdb|3NZ2|F Chain F, Crystal Structure Of Hexapeptide-Repeat
Containing-Acetyltransferase Vca0836 Complexed With
Acetyl Co Enzyme A From Vibrio Cholerae O1 Biovar Eltor
pdb|3NZ2|G Chain G, Crystal Structure Of Hexapeptide-Repeat
Containing-Acetyltransferase Vca0836 Complexed With
Acetyl Co Enzyme A From Vibrio Cholerae O1 Biovar Eltor
pdb|3NZ2|H Chain H, Crystal Structure Of Hexapeptide-Repeat
Containing-Acetyltransferase Vca0836 Complexed With
Acetyl Co Enzyme A From Vibrio Cholerae O1 Biovar Eltor
pdb|3NZ2|I Chain I, Crystal Structure Of Hexapeptide-Repeat
Containing-Acetyltransferase Vca0836 Complexed With
Acetyl Co Enzyme A From Vibrio Cholerae O1 Biovar Eltor
pdb|3NZ2|J Chain J, Crystal Structure Of Hexapeptide-Repeat
Containing-Acetyltransferase Vca0836 Complexed With
Acetyl Co Enzyme A From Vibrio Cholerae O1 Biovar Eltor
pdb|3NZ2|K Chain K, Crystal Structure Of Hexapeptide-Repeat
Containing-Acetyltransferase Vca0836 Complexed With
Acetyl Co Enzyme A From Vibrio Cholerae O1 Biovar Eltor
pdb|3NZ2|L Chain L, Crystal Structure Of Hexapeptide-Repeat
Containing-Acetyltransferase Vca0836 Complexed With
Acetyl Co Enzyme A From Vibrio Cholerae O1 Biovar Eltor
Length = 195
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 53/119 (44%), Gaps = 23/119 (19%)
Query: 95 GSGTNIQDNSLVHVAKSNLSGKVLPTTIGDNVTVGHSAVLHGCT---------------- 138
G I D++ ++ L G P TIGD+V +G S + +
Sbjct: 74 GKTIRIGDHTFINXNVVXLDGA--PITIGDHVLIGPSTQFYTASHSLDYRRRQAWETICK 131
Query: 139 ---VEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLRKLTD 194
+ED+ ++G + GV + +VAA S+V Q+ +P + GG PA+ LR L D
Sbjct: 132 PIVIEDDVWIGGNVVINQGVTIGARSVVAANSVVNQD--VPPDTLVGGTPARILRSLKD 188
>pdb|1OCX|A Chain A, E. Coli Maltose-O-Acetyltransferase
pdb|1OCX|B Chain B, E. Coli Maltose-O-Acetyltransferase
pdb|1OCX|C Chain C, E. Coli Maltose-O-Acetyltransferase
Length = 182
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 78/167 (46%), Gaps = 34/167 (20%)
Query: 36 QEQLSRHRTLMNIFDKAPAVDKDAFVAPSASIIGDVQVGRGSSIW--YGCVLRGDVNSIS 93
+E R + L ++F + +A++ P+ + G++ + + CV+ DV I
Sbjct: 40 EEHTLRQQILADLFGQV----TEAYIEPTFRCDYGYNIFLGNNFFANFDCVML-DVCPIR 94
Query: 94 VGSGTNIQDNSLVHVAKSNL------SGKVL--PTTIGDNVTVGHSAVLHGCTVEDEAFV 145
+G + ++ A + SG L P TIG+NV +G AV++
Sbjct: 95 IGDNCMLAPGVHIYTATHPIDPVARNSGAELGKPVTIGNNVWIGGRAVINP--------- 145
Query: 146 GMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLRKL 192
G T+ D VVV A+G++V ++ +P V GGNPA+ ++KL
Sbjct: 146 --GVTIGDNVVV------ASGAVVTKD--VPDNVVVGGNPARIIKKL 182
>pdb|3HJJ|A Chain A, Crystal Structure Of Maltose O-Acetyltransferase From
Bacillus Anthracis
pdb|3HJJ|B Chain B, Crystal Structure Of Maltose O-Acetyltransferase From
Bacillus Anthracis
pdb|3HJJ|C Chain C, Crystal Structure Of Maltose O-Acetyltransferase From
Bacillus Anthracis
pdb|3IGJ|A Chain A, Crystal Structure Of Maltose O-Acetyltransferase Complexed
With Acetyl Coenzyme A From Bacillus Anthracis
pdb|3IGJ|B Chain B, Crystal Structure Of Maltose O-Acetyltransferase Complexed
With Acetyl Coenzyme A From Bacillus Anthracis
pdb|3IGJ|C Chain C, Crystal Structure Of Maltose O-Acetyltransferase Complexed
With Acetyl Coenzyme A From Bacillus Anthracis
Length = 190
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 61/133 (45%), Gaps = 28/133 (21%)
Query: 70 DVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNL------SGKVL--PTT 121
++ VG+ + CV+ DV + +G ++ A L SGK P
Sbjct: 78 NIHVGKSFFANFNCVIL-DVCEVRIGDHCXFAPGVHIYTATHPLHPVERNSGKEYGKPVK 136
Query: 122 IGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVW 181
IG+NV +VG GA + GV + + ++A+G++V ++ +P+ V
Sbjct: 137 IGNNV-----------------WVGGGAIINPGVSIGDNAVIASGAVVTKD--VPNNVVV 177
Query: 182 GGNPAKFLRKLTD 194
GGNPAK ++ + +
Sbjct: 178 GGNPAKVIKTIEE 190
>pdb|3CJ8|A Chain A, Crystal Structure Of
2,3,4,5-Tetrahydropyridine-2-Carboxylate N-
Succinyltransferase From Enterococcus Faecalis V583
pdb|3CJ8|B Chain B, Crystal Structure Of
2,3,4,5-Tetrahydropyridine-2-Carboxylate N-
Succinyltransferase From Enterococcus Faecalis V583
pdb|3CJ8|C Chain C, Crystal Structure Of
2,3,4,5-Tetrahydropyridine-2-Carboxylate N-
Succinyltransferase From Enterococcus Faecalis V583
Length = 236
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 67/149 (44%), Gaps = 24/149 (16%)
Query: 56 DKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSG 115
D +A + P A I V++G + I G +L ++ ++ VG+GT I ++ L G
Sbjct: 89 DINARIEPGALIREKVEIGDQAVIXXGAIL--NIGAV-VGAGTXIDXGAV-------LGG 138
Query: 116 KVLPTTIGDNVTVGHSAVLHGC---------TVEDEAFVGMGATLLDGVVVERHGMVAAG 166
+ T+G + +G VL G +E+E +G A +L+G V
Sbjct: 139 R---ATVGKHCHIGAGTVLAGVIEPPSAAPVVIENEVVIGANAVVLEG--VRVGEGAVVA 193
Query: 167 SLVRQNTRIPSGEVWGGNPAKFLRKLTDE 195
+ +P+ V G PAK ++++ D+
Sbjct: 194 AGAVVVEDVPAHTVVAGVPAKVIKQIDDK 222
>pdb|1KQA|A Chain A, Galactoside Acetyltransferase In Complex With Coenzyme A
pdb|1KQA|B Chain B, Galactoside Acetyltransferase In Complex With Coenzyme A
pdb|1KQA|C Chain C, Galactoside Acetyltransferase In Complex With Coenzyme A
pdb|1KRR|A Chain A, Galactoside Acetyltransferase In Complex With Acetyl-
Coenzyme A
pdb|1KRR|B Chain B, Galactoside Acetyltransferase In Complex With Acetyl-
Coenzyme A
pdb|1KRR|C Chain C, Galactoside Acetyltransferase In Complex With Acetyl-
Coenzyme A
pdb|1KRU|A Chain A, Galactoside Acetyltransferase In Complex With Iptg And
Coenzyme A
pdb|1KRU|B Chain B, Galactoside Acetyltransferase In Complex With Iptg And
Coenzyme A
pdb|1KRU|C Chain C, Galactoside Acetyltransferase In Complex With Iptg And
Coenzyme A
pdb|1KRV|A Chain A, Galactoside Acetyltransferase In Complex With Coa And Pnp-
Beta-Gal
pdb|1KRV|B Chain B, Galactoside Acetyltransferase In Complex With Coa And Pnp-
Beta-Gal
pdb|1KRV|C Chain C, Galactoside Acetyltransferase In Complex With Coa And Pnp-
Beta-Gal
Length = 203
Score = 35.8 bits (81), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 65/154 (42%), Gaps = 32/154 (20%)
Query: 54 AVDKDAFVAPSA--SIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLV----- 106
V ++A+V P S ++ +GR + + D ++++G I N +
Sbjct: 57 TVGENAWVEPPVYFSYGSNIHIGRNFYANFNLTIVDDY-TVTIGDNVLIAPNVTLSVTGH 115
Query: 107 ---HVAKSNLSGKVLPTTIGDNVTVGHSAVLH-GCTVEDEAFVGMGATLLDGVVVERHGM 162
H + N P TIG+NV +G V++ G T+ D + +G
Sbjct: 116 PVHHELRKNGEMYSFPITIGNNVWIGSHVVINPGVTIGDNSVIG---------------- 159
Query: 163 VAAGSLVRQNTRIPSGEVWGGNPAKFLRKLTDEE 196
AGS+V ++ IP V G P + +R++ D +
Sbjct: 160 --AGSIVTKD--IPPNVVAAGVPCRVIREINDRD 189
>pdb|3FS8|A Chain A, Crystal Structure Of Qdtc, The Dtdp-3-Amino-3,6-Dideoxy-D-
Glucose N-Acetyl Transferase From Thermoanaerobacterium
Thermosaccharolyticum In Complex With Acetyl-Coa
pdb|3FS8|B Chain B, Crystal Structure Of Qdtc, The Dtdp-3-Amino-3,6-Dideoxy-D-
Glucose N-Acetyl Transferase From Thermoanaerobacterium
Thermosaccharolyticum In Complex With Acetyl-Coa
pdb|3FSB|A Chain A, Crystal Structure Of Qdtc, The Dtdp-3-Amino-3,6-Dideoxy-D-
Glucose N-Acetyl Transferase From Thermoanaerobacterium
Thermosaccharolyticum In Complex With Coa And
Dtdp-3-Amino- Quinovose
pdb|3FSB|B Chain B, Crystal Structure Of Qdtc, The Dtdp-3-Amino-3,6-Dideoxy-D-
Glucose N-Acetyl Transferase From Thermoanaerobacterium
Thermosaccharolyticum In Complex With Coa And
Dtdp-3-Amino- Quinovose
pdb|3FSC|A Chain A, Crystal Structure Of Qdtc, The Dtdp-3-Amino-3,6-Dideoxy-D-
Glucose N-Acetyl Transferase From Thermoanaerobacterium
Thermosaccharolyticum In Complex With Coa And
Dtdp-3-Amino- Fucose
pdb|3FSC|B Chain B, Crystal Structure Of Qdtc, The Dtdp-3-Amino-3,6-Dideoxy-D-
Glucose N-Acetyl Transferase From Thermoanaerobacterium
Thermosaccharolyticum In Complex With Coa And
Dtdp-3-Amino- Fucose
Length = 273
Score = 35.4 bits (80), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 88/200 (44%), Gaps = 37/200 (18%)
Query: 25 LGCR-LQGNY---YFQEQLSRHRTLMNIFDKAPAVDKDAFVAPSASIIGDVQVGRGSSIW 80
+G R + G Y ++ +++++ L+ + ++A + I GD +G
Sbjct: 47 IGARSILGEYLVDFYNDRINKKHPLI--------IGENALIRTENVIYGDTIIGDNFQTG 98
Query: 81 YGCVLRGDV---NSISVGSGTNIQDN----SLVHVAKSNLSGK---------VLPTTIGD 124
+ +R + N++ +G+ ++IQ + + V++ + G+ + P +
Sbjct: 99 HKVTIRENTKIGNNVKIGTLSDIQHHVYIGNYVNIHSNVFVGEKSIIKDFVWLFPHVVLT 158
Query: 125 NVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGN 184
N S L G T+E A + + +L G+ + +V AG++V ++ +P V GN
Sbjct: 159 NDPTPPSNELLGVTIELFAVIAARSVVLPGIHINEDALVGAGAVVTKD--VPKETVVVGN 216
Query: 185 PA-------KFLRKLTDEEI 197
PA K K+T E++
Sbjct: 217 PAREICSIRKIKNKITGEQV 236
>pdb|4EAA|A Chain A, X-Ray Crystal Structure Of The H141n Mutant Of Perosamine
N- Acetyltransferase From Caulobacter Crescentus In
Complex With Coa And Gdp-Perosamine
Length = 220
Score = 35.0 bits (79), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 81/177 (45%), Gaps = 28/177 (15%)
Query: 14 WIRETGQALDRLGCRLQGNYYFQEQLSRHRTLMNIFDKAPAVDKDAFVAPSASIIGDVQV 73
+RE Q L RL + G+ +++L R + + F A+ A V+PS V++
Sbjct: 65 MLRE--QGLSRLFVAI-GDNRLRQKLGR-KARDHGFSLVNAIHPSAVVSPS------VRL 114
Query: 74 GRGSSIWYGCVLRGD--VNSISVGSGTNIQDNSLVHVAKSNLSGKVLPTTIGDNVTVGHS 131
G G ++ G + D + +++ + + DN A +L P S
Sbjct: 115 GEGVAVMAGVAINADSWIGDLAIINTGAVVDNDCRLGAACHLG----PA----------S 160
Query: 132 AVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKF 188
A+ G +V + AF+G+GA ++ GV + +V AG +V ++ +P + G PAK
Sbjct: 161 ALAGGVSVGERAFLGVGARVIPGVTIGADTIVGAGGVVVRD--LPDSVLAIGVPAKI 215
>pdb|3R8Y|A Chain A, Structure Of The Bacillus Anthracis Tetrahydropicolinate
Succinyltransferase
pdb|3R8Y|B Chain B, Structure Of The Bacillus Anthracis Tetrahydropicolinate
Succinyltransferase
pdb|3R8Y|C Chain C, Structure Of The Bacillus Anthracis Tetrahydropicolinate
Succinyltransferase
pdb|3R8Y|D Chain D, Structure Of The Bacillus Anthracis Tetrahydropicolinate
Succinyltransferase
pdb|3R8Y|E Chain E, Structure Of The Bacillus Anthracis Tetrahydropicolinate
Succinyltransferase
pdb|3R8Y|F Chain F, Structure Of The Bacillus Anthracis Tetrahydropicolinate
Succinyltransferase
Length = 240
Score = 34.3 bits (77), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 73/146 (50%), Gaps = 24/146 (16%)
Query: 59 AFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVL 118
A + P A I V++G + I + ++ ++ +G G+ I N++ L G+
Sbjct: 92 ARIEPGAIIRDHVEIGDNAVIMMNATI--NIGAV-IGEGSMIDMNAV-------LGGR-- 139
Query: 119 PTTIGDNVTVGHSAVLHG---------CTVEDEAFVGMGATLLDGVVVERHGMVAAGSLV 169
T+G N VG AVL G VED+ +G +L+GV V + +VAAG++V
Sbjct: 140 -ATVGKNCHVGAGAVLAGVIEPPSAKPVIVEDDVVIGANVVVLEGVTVGKGAVVAAGAVV 198
Query: 170 RQNTRIPSGEVWGGNPAKFLRKLTDE 195
++ +P V G PA+ ++++ ++
Sbjct: 199 TED--VPPYTVVAGTPARVIKEIDEK 222
>pdb|3T57|A Chain A, Activity And Crystal Structure Of Arabidopsis
Udp-N-Acetylglucosamine Acyltransferase
Length = 305
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 42/99 (42%), Gaps = 5/99 (5%)
Query: 86 RGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPTTIGDN-VTVGHSAVLHGCTVEDEAF 144
GD + +G+ I++ +H S S K T IGDN + +G + H C + D
Sbjct: 103 HGDECFLCIGNNNEIREFCSIH-RSSKPSDK---TVIGDNNLIMGSCHIAHDCKIGDRNI 158
Query: 145 VGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGG 183
L VVVE + A S+V Q I S GG
Sbjct: 159 FANNTLLAGHVVVEDNTHTAGASVVHQFCHIGSFAFIGG 197
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 50/115 (43%), Gaps = 29/115 (25%)
Query: 56 DKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVH-------- 107
D + + PSA + + +G+G S+ C + +S+ +G+G + +S V
Sbjct: 5 DSEVLIHPSAVVHPNAVIGKGVSVGPYCTIG---SSVKLGNGCKLYPSSHVFGNTELGES 61
Query: 108 --VAKSNLSGKVLP--TTIGDNVTVGHSAVL----------HGCTVEDEAFVGMG 148
+ + G LP T IG N +GH AV+ HG DE F+ +G
Sbjct: 62 CVLMTGAVVGDELPGYTFIGCNNIIGHHAVVGVKCQDLKYKHG----DECFLCIG 112
>pdb|2IC7|A Chain A, Crystal Structure Of Maltose Transacetylase From
Geobacillus Kaustophilus
pdb|2IC7|B Chain B, Crystal Structure Of Maltose Transacetylase From
Geobacillus Kaustophilus
pdb|2IC7|C Chain C, Crystal Structure Of Maltose Transacetylase From
Geobacillus Kaustophilus
pdb|2P2O|A Chain A, Crystal Structure Of Maltose Transacetylase From
Geobacillus Kaustophilus P2(1) Crystal Form
pdb|2P2O|B Chain B, Crystal Structure Of Maltose Transacetylase From
Geobacillus Kaustophilus P2(1) Crystal Form
pdb|2P2O|C Chain C, Crystal Structure Of Maltose Transacetylase From
Geobacillus Kaustophilus P2(1) Crystal Form
pdb|2P2O|D Chain D, Crystal Structure Of Maltose Transacetylase From
Geobacillus Kaustophilus P2(1) Crystal Form
pdb|2P2O|E Chain E, Crystal Structure Of Maltose Transacetylase From
Geobacillus Kaustophilus P2(1) Crystal Form
pdb|2P2O|F Chain F, Crystal Structure Of Maltose Transacetylase From
Geobacillus Kaustophilus P2(1) Crystal Form
Length = 185
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 21/75 (28%)
Query: 119 PTTIGDNVTVGHSAVLH-GCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPS 177
P IG NV +G AV++ G T+ D A ++A+G++V ++ +P+
Sbjct: 130 PVVIGHNVWIGGRAVINPGVTIGDNA------------------VIASGAVVTKD--VPA 169
Query: 178 GEVWGGNPAKFLRKL 192
V GGNPAK ++ L
Sbjct: 170 NAVVGGNPAKVIKWL 184
>pdb|3JQY|B Chain B, Crystal Strucutre Of The Polysia Specific
Acetyltransferase Neuo
pdb|3JQY|A Chain A, Crystal Strucutre Of The Polysia Specific
Acetyltransferase Neuo
pdb|3JQY|C Chain C, Crystal Strucutre Of The Polysia Specific
Acetyltransferase Neuo
Length = 252
Score = 33.1 bits (74), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/147 (21%), Positives = 57/147 (38%), Gaps = 39/147 (26%)
Query: 80 WYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPTTIGD---------NVTVGH 130
W + RGD N + + + I+ + + + G+ TTIG NVT+GH
Sbjct: 74 WLTVIFRGDNNYVRIHKNSKIKGDIVATKGSKVIIGR--RTTIGAGFEVVTDKCNVTIGH 131
Query: 131 SAVL--------------------------HGCTVEDEAFVGMGATLLDGVVVERHGMVA 164
++ + +VG +++ GV V ++
Sbjct: 132 DCMIARDVILRASDGHPIFDIHSKKRINWAKDIIISSYVWVGRNVSIMKGVSVGSGSVIG 191
Query: 165 AGSLVRQNTRIPSGEVWGGNPAKFLRK 191
GS+V ++ +PS GNPAK +++
Sbjct: 192 YGSIVTKD--VPSMCAAAGNPAKIIKR 216
Score = 27.7 bits (60), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 22/38 (57%)
Query: 60 FVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSG 97
+V + SI+ V VG GS I YG ++ DV S+ +G
Sbjct: 171 WVGRNVSIMKGVSVGSGSVIGYGSIVTKDVPSMCAAAG 208
>pdb|4HUR|A Chain A, Crystal Structure Of Streptogramin Group A Antibiotic
Acetyltransferase Vata From Staphylococcus Aureus In
Complex With Acetyl Coenzyme A
pdb|4HUR|B Chain B, Crystal Structure Of Streptogramin Group A Antibiotic
Acetyltransferase Vata From Staphylococcus Aureus In
Complex With Acetyl Coenzyme A
pdb|4HUR|C Chain C, Crystal Structure Of Streptogramin Group A Antibiotic
Acetyltransferase Vata From Staphylococcus Aureus In
Complex With Acetyl Coenzyme A
pdb|4HUS|A Chain A, Crystal Structure Of Streptogramin Group A Antibiotic
Acetyltransferase Vata From Staphylococcus Aureus In
Complex With Virginiamycin M1
pdb|4HUS|B Chain B, Crystal Structure Of Streptogramin Group A Antibiotic
Acetyltransferase Vata From Staphylococcus Aureus In
Complex With Virginiamycin M1
pdb|4HUS|C Chain C, Crystal Structure Of Streptogramin Group A Antibiotic
Acetyltransferase Vata From Staphylococcus Aureus In
Complex With Virginiamycin M1
Length = 220
Score = 32.7 bits (73), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Query: 139 VEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLRK-LTDEEI 197
+ ++ ++G T++ GV + ++AA ++V +N + + GGNP KF+RK +D I
Sbjct: 122 IGNDVWIGRDVTIMPGVKIGDGAIIAAEAVVTKN--VAPYSIVGGNPLKFIRKRFSDGVI 179
Query: 198 AFISQSATNYSNLAQVHAAENAKSFDEIEFEKVLRKK 234
A + NL EN + E + RK+
Sbjct: 180 E--EWLALQWWNLDMKIINENLPFIINGDIEMLKRKR 214
>pdb|4EA7|A Chain A, X-Ray Crystal Structure Of Perb From Caulobacter
Crescentus In Complex With Coa And Gdp-Perosamine At 1.0
Angstrom Resolution
pdb|4EA8|A Chain A, X-Ray Crystal Structure Of Perb From Caulobacter
Crescentus In Complex With Coenzyme A And
Gdp-N-Acetylperosamine At 1 Angstrom Resolution
pdb|4EA9|A Chain A, X-Ray Structure Of Gdp-Perosamine N-Acetyltransferase In
Complex With Transition State Analog At 0.9 Angstrom
Resolution
Length = 220
Score = 32.7 bits (73), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 81/177 (45%), Gaps = 28/177 (15%)
Query: 14 WIRETGQALDRLGCRLQGNYYFQEQLSRHRTLMNIFDKAPAVDKDAFVAPSASIIGDVQV 73
+RE Q L RL + G+ +++L R + + F A+ A V+PS V++
Sbjct: 65 MLRE--QGLSRLFVAI-GDNRLRQKLGR-KARDHGFSLVNAIHPSAVVSPS------VRL 114
Query: 74 GRGSSIWYGCVLRGD--VNSISVGSGTNIQDNSLVHVAKSNLSGKVLPTTIGDNVTVGHS 131
G G ++ G + D + +++ + + D+ A +L P S
Sbjct: 115 GEGVAVMAGVAINADSWIGDLAIINTGAVVDHDCRLGAACHLG----PA----------S 160
Query: 132 AVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKF 188
A+ G +V + AF+G+GA ++ GV + +V AG +V ++ +P + G PAK
Sbjct: 161 ALAGGVSVGERAFLGVGARVIPGVTIGADTIVGAGGVVVRD--LPDSVLAIGVPAKI 215
>pdb|4E8L|A Chain A, Crystal Structure Of Streptogramin Group A Antibiotic
Acetyltransferase Vata From Staphylococcus Aureus
pdb|4E8L|B Chain B, Crystal Structure Of Streptogramin Group A Antibiotic
Acetyltransferase Vata From Staphylococcus Aureus
pdb|4E8L|C Chain C, Crystal Structure Of Streptogramin Group A Antibiotic
Acetyltransferase Vata From Staphylococcus Aureus
Length = 219
Score = 32.7 bits (73), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Query: 139 VEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLRK-LTDEEI 197
+ ++ ++G T++ GV + ++AA ++V +N + + GGNP KF+RK +D I
Sbjct: 121 IGNDVWIGRDVTIMPGVKIGDGAIIAAEAVVTKN--VAPYSIVGGNPLKFIRKRFSDGVI 178
Query: 198 AFISQSATNYSNLAQVHAAENAKSFDEIEFEKVLRKK 234
A + NL EN + E + RK+
Sbjct: 179 E--EWLALQWWNLDMKIINENLPFIINGDIEMLKRKR 213
>pdb|4EAB|A Chain A, X-Ray Crystal Structure Of The H141a Mutant Of
Gdp-Perosamine N-Acetyl Transferase From Caulobacter
Crescentus In Complex With Coa And Gdp- Perosamine
Length = 220
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 30/178 (16%)
Query: 14 WIRETGQALDRLGCRLQGNYYFQEQLSRHRTLMNIFDKAPAVDKDAFVAPSASIIGDVQV 73
+RE Q L RL + G+ +++L R + + F A+ A V+PS V++
Sbjct: 65 MLRE--QGLSRLFVAI-GDNRLRQKLGR-KARDHGFSLVNAIHPSAVVSPS------VRL 114
Query: 74 GRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPTT--IGDNVTVG-H 130
G G ++ G + D + I D ++++ +G V+ +G +G
Sbjct: 115 GEGVAVMAGVAINAD---------SWIGDLAIIN------TGAVVDADCRLGAACHLGPA 159
Query: 131 SAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKF 188
SA+ G +V + AF+G+GA ++ GV + +V AG +V ++ +P + G PAK
Sbjct: 160 SALAGGVSVGERAFLGVGARVIPGVTIGADTIVGAGGVVVRD--LPDSVLAIGVPAKI 215
>pdb|3QNZ|B Chain B, Orthorhombic Form Of Igg1 Fab Fragment (in Complex With
Antigenic Tubulin Peptide) Sharing Same Fv As Iga
pdb|3QO0|B Chain B, Monoclinic Form Of Igg1 Fab Fragment (In Complex With
Antigenic Peptide) Sharing Same Fv As Iga
pdb|3QO1|B Chain B, Monoclinic Form Of Igg1 Fab Fragment (apo Form) Sharing
Same Fv As Iga
Length = 220
Score = 32.0 bits (71), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 8/62 (12%)
Query: 81 YGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSG-KVLPTTIGDNVTVGHSAVLHGCTV 139
Y CV+RGDV + G GT LV V+ ++ G V P T G +A L GC V
Sbjct: 96 YYCVIRGDVYNRQWGQGT------LVTVSSASTKGPSVFPLAPSSKSTSGGTAAL-GCLV 148
Query: 140 ED 141
+D
Sbjct: 149 KD 150
>pdb|4EGG|A Chain A, Computationally Designed Self-Assembling Tetrahedron
Protein, T310
pdb|4EGG|B Chain B, Computationally Designed Self-Assembling Tetrahedron
Protein, T310
pdb|4EGG|C Chain C, Computationally Designed Self-Assembling Tetrahedron
Protein, T310
pdb|4EGG|D Chain D, Computationally Designed Self-Assembling Tetrahedron
Protein, T310
pdb|4EGG|E Chain E, Computationally Designed Self-Assembling Tetrahedron
Protein, T310
pdb|4EGG|F Chain F, Computationally Designed Self-Assembling Tetrahedron
Protein, T310
Length = 207
Score = 31.6 bits (70), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 56/135 (41%), Gaps = 30/135 (22%)
Query: 70 DVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLS--------GKVLPTT 121
+V++G+ + C D I++G I N + A L+ K P
Sbjct: 74 NVKLGKNVYVNTNCYFM-DGGQITIGDNVFIGPNCGFYTATHPLNFHHRNEGFEKAGPIH 132
Query: 122 IGDNVTVG-HSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEV 180
IG N G H AVL G T+ + + +G AGS+V ++ IP +
Sbjct: 133 IGSNTWFGGHVAVLPGVTIGEGSVIG------------------AGSVVTKD--IPPHSL 172
Query: 181 WGGNPAKFLRKLTDE 195
GNP K +RK+ ++
Sbjct: 173 AVGNPCKVVRKIDND 187
>pdb|3GVD|A Chain A, Crystal Structure Of Serine Acetyltransferase Cyse From
Yersinia Pestis
pdb|3GVD|B Chain B, Crystal Structure Of Serine Acetyltransferase Cyse From
Yersinia Pestis
pdb|3GVD|C Chain C, Crystal Structure Of Serine Acetyltransferase Cyse From
Yersinia Pestis
pdb|3GVD|D Chain D, Crystal Structure Of Serine Acetyltransferase Cyse From
Yersinia Pestis
pdb|3GVD|E Chain E, Crystal Structure Of Serine Acetyltransferase Cyse From
Yersinia Pestis
pdb|3GVD|F Chain F, Crystal Structure Of Serine Acetyltransferase Cyse From
Yersinia Pestis
pdb|3GVD|G Chain G, Crystal Structure Of Serine Acetyltransferase Cyse From
Yersinia Pestis
pdb|3GVD|H Chain H, Crystal Structure Of Serine Acetyltransferase Cyse From
Yersinia Pestis
pdb|3GVD|I Chain I, Crystal Structure Of Serine Acetyltransferase Cyse From
Yersinia Pestis
pdb|3GVD|J Chain J, Crystal Structure Of Serine Acetyltransferase Cyse From
Yersinia Pestis
pdb|3GVD|K Chain K, Crystal Structure Of Serine Acetyltransferase Cyse From
Yersinia Pestis
pdb|3GVD|L Chain L, Crystal Structure Of Serine Acetyltransferase Cyse From
Yersinia Pestis
Length = 276
Score = 31.6 bits (70), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 27/49 (55%)
Query: 50 DKAPAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGT 98
D+ P + + + A I+G+++VGRG+ I G V+ V + + +G
Sbjct: 194 DRHPKIREGVMIGAGAKILGNIEVGRGAKIGAGSVVLQSVPAHTTAAGV 242
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query: 90 NSISVGSGTNIQDNSLVH--VAKSNLSGKVLPTT--IGDNVTVGHSAVLHGC-------- 137
N +SV G +I + + + + +G V+ T + ++V++ S L G
Sbjct: 137 NQVSVAFGVDIHPAATIGCGIMLDHATGIVIGETAVVENDVSILQSVTLGGTGKTSGDRH 196
Query: 138 -TVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLRK 191
+ + +G GA +L + V R + AGS+V Q+ +P+ G PA+ + K
Sbjct: 197 PKIREGVMIGAGAKILGNIEVGRGAKIGAGSVVLQS--VPAHTTAAGVPARIVGK 249
>pdb|1J2Z|A Chain A, Crystal Structure Of Udp-n-acetylglucosamine
Acyltransferase
Length = 270
Score = 31.6 bits (70), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 28/142 (19%), Positives = 60/142 (42%), Gaps = 13/142 (9%)
Query: 55 VDKDAFVAPSASIIGDVQVGRGSSIWYGCVL---------RGDVNSISVGSGTNIQDNSL 105
+D+ + + ++ G VG+ + I+ VL +G+ + + +G I++ +
Sbjct: 34 LDEGVKLHNNVTLQGHTFVGKNTEIFPFAVLGTQPQDLKYKGEYSELIIGEDNLIREFCM 93
Query: 106 VHVAKSNLSGKVLPTTIGD-NVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVA 164
++ G + T IGD N+ + + V H C + + G TL + + + +
Sbjct: 94 IN---PGTEGGIKKTLIGDKNLLMAYVHVAHDCVIGSHCILANGVTLAGHIEIGDYVNIG 150
Query: 165 AGSLVRQNTRIPSGEVWGGNPA 186
+ + Q RI G + G A
Sbjct: 151 GLTAIHQFVRIAKGCMIAGKSA 172
>pdb|3FTT|A Chain A, Crystal Structure Of The Galactoside O-Acetyltransferase
From Staphylococcus Aureus
Length = 199
Score = 31.6 bits (70), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 56/135 (41%), Gaps = 30/135 (22%)
Query: 70 DVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLS--------GKVLPTT 121
+V++G+ + C D I++G I N + A L+ K P
Sbjct: 74 NVKLGKNVYVNTNCYFX-DGGQITIGDNVFIGPNCGFYTATHPLNFHHRNEGFEKAGPIH 132
Query: 122 IGDNVTVG-HSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEV 180
IG N G H AVL G T+ + + +G AGS+V ++ IP +
Sbjct: 133 IGSNTWFGGHVAVLPGVTIGEGSVIG------------------AGSVVTKD--IPPHSL 172
Query: 181 WGGNPAKFLRKLTDE 195
GNP K +RK+ ++
Sbjct: 173 AVGNPCKVVRKIDND 187
>pdb|4DCL|A Chain A, Computationally Designed Self-Assembling Tetrahedron
Protein, T308, Crystallized In Space Group F23
Length = 207
Score = 31.6 bits (70), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 56/135 (41%), Gaps = 30/135 (22%)
Query: 70 DVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLS--------GKVLPTT 121
+V++G+ + C D I++G I N + A L+ K P
Sbjct: 74 NVKLGKNVYVNTNCYFM-DGGQITIGDNVFIGPNCGFYTATHPLNFHHRNEGFEKAGPIH 132
Query: 122 IGDNVTVG-HSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEV 180
IG N G H AVL G T+ + + +G AGS+V ++ IP +
Sbjct: 133 IGSNTWFGGHVAVLPGVTIGEGSVIG------------------AGSVVTKD--IPPHSL 172
Query: 181 WGGNPAKFLRKLTDE 195
GNP K +RK+ ++
Sbjct: 173 AVGNPCKVVRKIDND 187
>pdb|3V4E|A Chain A, Crystal Structure Of The Galactoside O-Acetyltransferase
In Complex With Coa
pdb|3V4E|B Chain B, Crystal Structure Of The Galactoside O-Acetyltransferase
In Complex With Coa
pdb|3V4E|C Chain C, Crystal Structure Of The Galactoside O-Acetyltransferase
In Complex With Coa
Length = 202
Score = 31.6 bits (70), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 56/135 (41%), Gaps = 30/135 (22%)
Query: 70 DVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLS--------GKVLPTT 121
+V++G+ + C D I++G I N + A L+ K P
Sbjct: 77 NVKLGKNVYVNTNCYFM-DGGQITIGDNVFIGPNCGFYTATHPLNFHHRNEGFEKAGPIH 135
Query: 122 IGDNVTVG-HSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEV 180
IG N G H AVL G T+ + + +G AGS+V ++ IP +
Sbjct: 136 IGSNTWFGGHVAVLPGVTIGEGSVIG------------------AGSVVTKD--IPPHSL 175
Query: 181 WGGNPAKFLRKLTDE 195
GNP K +RK+ ++
Sbjct: 176 AVGNPCKVVRKIDND 190
>pdb|1T3D|A Chain A, Crystal Structure Of Serine Acetyltransferase From E.Coli
At 2.2a
pdb|1T3D|B Chain B, Crystal Structure Of Serine Acetyltransferase From E.Coli
At 2.2a
pdb|1T3D|C Chain C, Crystal Structure Of Serine Acetyltransferase From E.Coli
At 2.2a
Length = 289
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 26/48 (54%)
Query: 50 DKAPAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSG 97
D+ P + + + A I+G+++VGRG+ I G V+ V + +G
Sbjct: 207 DRHPKIREGVXIGAGAKILGNIEVGRGAKIGAGSVVLQPVPPHTTAAG 254
>pdb|2AQ9|A Chain A, Structure Of E. Coli Lpxa With A Bound Peptide That Is
Competitive With Acyl-Acp
pdb|2JF3|A Chain A, Nucleotide Substrate Binding By Udp-N-Acetylglucosamine
Acyltransferase
pdb|1LXA|A Chain A, Udp N-Acetylglucosamine Acyltransferase
pdb|2QIA|A Chain A, Structural Basis For The Acyl Chain Selectivity And
Mechanism Of Udp-N-Acetylglucosamine Acyltransferase
pdb|2QIV|X Chain X, Structural Basis For The Acyl Chain Selectivity And
Mechanism Of Udp-N-Acetylglucosamine Acyltransferase
Length = 262
Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 55/125 (44%), Gaps = 13/125 (10%)
Query: 69 GDVQVGRGSSIWYGCVLRGDVNS----------ISVGSGTNIQDNSLVHVAKSNLSGKVL 118
G ++GR + I+ + G+VN + +G I+++ +H + + G L
Sbjct: 52 GHTKIGRDNEIYQFASI-GEVNQDLKYAGEPTRVEIGDRNRIRESVTIH--RGTVQGGGL 108
Query: 119 PTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSG 178
DN+ + ++ + H CTV + + ATL V V+ ++ + V Q I +
Sbjct: 109 TKVGSDNLLMINAHIAHDCTVGNRCILANNATLAGHVSVDDFAIIGGMTAVHQFCIIGAH 168
Query: 179 EVWGG 183
+ GG
Sbjct: 169 VMVGG 173
>pdb|3BRK|X Chain X, Crystal Structure Of Adp-Glucose Pyrophosphorylase From
Agrobacterium Tumefaciens
Length = 420
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 69/168 (41%), Gaps = 40/168 (23%)
Query: 46 MNIFDKAPAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSL 105
++I+DK+ + A + P A + D + RGS++ V+ GD + SG + + L
Sbjct: 290 LDIYDKSWPIWTYAEITPPAKFVHDDEDRRGSAV--SSVVSGDC----IISGAALNRSLL 343
Query: 106 VHVAKSNLSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAA 165
++N ++ + +V +G A L ++ HG+V
Sbjct: 344 FTGVRANSYSRLENAVVLPSVKIGRHAQLSNVVID-------------------HGVV-- 382
Query: 166 GSLVRQNTRIPSGEVWGGNP---AKFLRKLTDEEIAFISQSATNYSNL 210
IP G + G +P AK R+ T+ I I+QS + +L
Sbjct: 383 ---------IPEGLIVGEDPELDAKRFRR-TESGICLITQSXIDKLDL 420
>pdb|2JF2|A Chain A, Nucleotide Substrate Binding By Udp-n-acetylglucosamine
Acyltransferase
Length = 264
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 55/125 (44%), Gaps = 13/125 (10%)
Query: 69 GDVQVGRGSSIWYGCVLRGDVNS----------ISVGSGTNIQDNSLVHVAKSNLSGKVL 118
G ++GR + I+ + G+VN + +G I+++ +H + + G L
Sbjct: 54 GHTKIGRDNEIYQFASI-GEVNQDLKYAGEPTRVEIGDRNRIRESVTIH--RGTVQGGGL 110
Query: 119 PTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSG 178
DN+ + ++ + H CTV + + ATL V V+ ++ + V Q I +
Sbjct: 111 TKVGSDNLLMINAHIAHDCTVGNRCILANNATLAGHVSVDDFAIIGGMTAVHQFCIIGAH 170
Query: 179 EVWGG 183
+ GG
Sbjct: 171 VMVGG 175
>pdb|1XAT|A Chain A, Structure Of The Hexapeptide Xenobiotic Acetyltransferase
From Pseudomonas Aeruginosa
pdb|2XAT|A Chain A, Complex Of The Hexapeptide Xenobiotic Acetyltransferase
With Chloramphenicol And Desulfo-Coenzyme A
Length = 212
Score = 29.3 bits (64), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 142 EAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLRK-LTDEEIAFI 200
E ++G A + GV V ++ + +LV + P V GGNPA+ +RK +D +I +
Sbjct: 116 EVWIGTEAMFMPGVRVGHGAIIGSRALVTGDVE-PYAIV-GGNPARTIRKRFSDGDIQNL 173
Query: 201 SQSATNYSNLAQVHAA 216
+ A LA + AA
Sbjct: 174 LEMAWWDWPLADIEAA 189
>pdb|3MC4|A Chain A, Crystal Structure Of WwRSP5WWP DOMAIN: BACTERIAL
TRANSFERASE Hexapeptide Repeat: Serine
O-Acetyltransferase From Brucella Melitensis
pdb|3MC4|B Chain B, Crystal Structure Of WwRSP5WWP DOMAIN: BACTERIAL
TRANSFERASE Hexapeptide Repeat: Serine
O-Acetyltransferase From Brucella Melitensis
Length = 287
Score = 29.3 bits (64), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 50 DKAPAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVL 85
D+ P + + + A I+G++QVG+ S I G V+
Sbjct: 214 DRHPKIRQGVLIGAGAKILGNIQVGQXSKIAAGSVV 249
Score = 28.5 bits (62), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 11/75 (14%)
Query: 124 DNVTVGHSAVLHGC---------TVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTR 174
DNV++ H L G + +G GA +L + V + +AAGS+V ++
Sbjct: 195 DNVSILHGVTLGGTGKSSGDRHPKIRQGVLIGAGAKILGNIQVGQXSKIAAGSVVLKS-- 252
Query: 175 IPSGEVWGGNPAKFL 189
+P G PA+ +
Sbjct: 253 VPHNVTVAGVPARII 267
>pdb|3C8V|A Chain A, Crystal Structure Of Putative Acetyltransferase
(Yp_390128.1) From Desulfovibrio Desulfuricans G20 At
2.28 A Resolution
pdb|3C8V|B Chain B, Crystal Structure Of Putative Acetyltransferase
(Yp_390128.1) From Desulfovibrio Desulfuricans G20 At
2.28 A Resolution
pdb|3C8V|C Chain C, Crystal Structure Of Putative Acetyltransferase
(Yp_390128.1) From Desulfovibrio Desulfuricans G20 At
2.28 A Resolution
pdb|3C8V|D Chain D, Crystal Structure Of Putative Acetyltransferase
(Yp_390128.1) From Desulfovibrio Desulfuricans G20 At
2.28 A Resolution
Length = 496
Score = 28.9 bits (63), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 22/106 (20%)
Query: 86 RGDVNSISVGSGTNIQDNSLVHVAKSNLS--------GKVLPTTIGDNVTVGHSAVLHGC 137
R +++ G G+N Q+N ++ S L GK++ +GD + G ++ L G
Sbjct: 303 RAYLDNAWXGKGSNAQEN--CYIINSRLERNCVTAHGGKIINAHLGDXIFTGFNSFLQGS 360
Query: 138 TVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGE-VWG 182
+ + + +G DG VV H ++ + + IP+G VWG
Sbjct: 361 ---ESSPLKIG----DGCVVXPHTIID----LEEPLEIPAGHLVWG 395
>pdb|2J9O|A Chain A, Structure Of Pbp-A, L158e Mutant
pdb|2J9O|B Chain B, Structure Of Pbp-A, L158e Mutant
pdb|2J9O|C Chain C, Structure Of Pbp-A, L158e Mutant
pdb|2J9O|D Chain D, Structure Of Pbp-A, L158e Mutant
pdb|2JBF|A Chain A, Structure Of Pbp-A, L158e Mutant. Acyl-Enzyme Complex With
Penicillin-G.
pdb|2JBF|B Chain B, Structure Of Pbp-A, L158e Mutant. Acyl-Enzyme Complex With
Penicillin-G.
pdb|2JBF|C Chain C, Structure Of Pbp-A, L158e Mutant. Acyl-Enzyme Complex With
Penicillin-G.
pdb|2JBF|D Chain D, Structure Of Pbp-A, L158e Mutant. Acyl-Enzyme Complex With
Penicillin-G
Length = 298
Score = 28.5 bits (62), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 52/121 (42%), Gaps = 15/121 (12%)
Query: 92 ISVGSGTNIQDNS---LVHVAKSNLSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGM- 147
+ +G G + S L+ + + ++ +LP +G T+ H G V D V M
Sbjct: 177 LKIGQGEILSPRSRDRLLDIMRRTVTNTLLPAGLGKGATIAHKTGDIGIVVGDAGMVDMP 236
Query: 148 -GATLLDGVVVERHGMVAAGS-LVRQNTRIPSGEVWGGNPAKFLRKLTDEEIAFISQSAT 205
G + ++V+R GS L+RQ +R+ V+ + KL+ E IS+
Sbjct: 237 NGQRYVAAMMVKRPYNDPRGSELIRQVSRM----VY-----QAFEKLSPPEQKLISEEDL 287
Query: 206 N 206
N
Sbjct: 288 N 288
>pdb|2J7V|A Chain A, Structure Of Pbp-A
pdb|2J7V|B Chain B, Structure Of Pbp-A
pdb|2J7V|C Chain C, Structure Of Pbp-A
pdb|2J7V|D Chain D, Structure Of Pbp-A
pdb|2J8Y|A Chain A, Structure Of Pbp-A Acyl-Enzyme Complex With Penicillin-G
pdb|2J8Y|B Chain B, Structure Of Pbp-A Acyl-Enzyme Complex With Penicillin-G
pdb|2J8Y|C Chain C, Structure Of Pbp-A Acyl-Enzyme Complex With Penicillin-G
pdb|2J8Y|D Chain D, Structure Of Pbp-A Acyl-Enzyme Complex With Penicillin-G
Length = 298
Score = 28.5 bits (62), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 52/121 (42%), Gaps = 15/121 (12%)
Query: 92 ISVGSGTNIQDNS---LVHVAKSNLSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGM- 147
+ +G G + S L+ + + ++ +LP +G T+ H G V D V M
Sbjct: 177 LKIGQGEILSPRSRDRLLDIMRRTVTNTLLPAGLGKGATIAHKTGDIGIVVGDAGMVDMP 236
Query: 148 -GATLLDGVVVERHGMVAAGS-LVRQNTRIPSGEVWGGNPAKFLRKLTDEEIAFISQSAT 205
G + ++V+R GS L+RQ +R+ V+ + KL+ E IS+
Sbjct: 237 NGQRYVAAMMVKRPYNDPRGSELIRQVSRM----VY-----QAFEKLSPPEQKLISEEDL 287
Query: 206 N 206
N
Sbjct: 288 N 288
>pdb|3P1W|A Chain A, Crystal Structure Of Rab Gdi From Plasmodium Falciparum,
Pfl2060c
Length = 475
Score = 28.5 bits (62), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 29 LQGNYYFQEQLSRHRTLMNIFDKAPAVDKDAFVAPSASII 68
++G+Y +Q Q T K PA D +A V+P S++
Sbjct: 120 VEGSYVYQHQKKGFLTSEKFIHKVPATDMEALVSPLLSLM 159
>pdb|2CB5|A Chain A, Human Bleomycin Hydrolase, C73s/dele455 Mutant
pdb|2CB5|B Chain B, Human Bleomycin Hydrolase, C73s/dele455 Mutant
Length = 453
Score = 28.5 bits (62), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 8/67 (11%)
Query: 73 VGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVH-VAKSNLSGKVLPTTIGDNVTVGHS 131
+ G ++W+GC + NS S N+ D+ LV V+ N++ + +T G S
Sbjct: 315 IKDGEAVWFGCDVGKHFNSKLGLSDMNLYDHELVFGVSLKNMNK-------AERLTFGES 367
Query: 132 AVLHGCT 138
+ H T
Sbjct: 368 LMTHAMT 374
>pdb|3TV0|A Chain A, Structure Of Dynactin P27 Subunit
pdb|3TV0|B Chain B, Structure Of Dynactin P27 Subunit
Length = 194
Score = 28.5 bits (62), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 69/175 (39%), Gaps = 31/175 (17%)
Query: 59 AFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLV------HVAKSN 112
A V + I GDV +G + I + + I +G G I++ +L+ ++
Sbjct: 19 AVVCVESEIRGDVTIGPRTVIHPKARIIAEAGPIVIGEGNLIEEQALIINAYPDNITPDT 78
Query: 113 LSGKVLPTTIGDN----VTVGHSAVLHG--CTVEDEAFVGMGATLLDGVVVERHGMVAAG 166
+ P IG N V A+ G +E +A+VG L G ++ G
Sbjct: 79 EDPEPKPMIIGTNNVFEVGCYSQAMKMGDNNVIESKAYVGRNVILTSGCII--------G 130
Query: 167 SLVRQNT--RIPSGEVWGGNPAKFLRKLTDE-------EIAFISQSATNYSNLAQ 212
+ NT IP V G A LR++ E ++ F+ + NY +L +
Sbjct: 131 ACCNLNTFEVIPENTVIYG--ADCLRRVQTERPQPQTLQLDFLMKILPNYHHLKK 183
>pdb|1CB5|A Chain A, Human Bleomycin Hydrolase.
pdb|1CB5|B Chain B, Human Bleomycin Hydrolase.
pdb|1CB5|C Chain C, Human Bleomycin Hydrolase
Length = 453
Score = 28.5 bits (62), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 8/67 (11%)
Query: 73 VGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVH-VAKSNLSGKVLPTTIGDNVTVGHS 131
+ G ++W+GC + NS S N+ D+ LV V+ N++ + +T G S
Sbjct: 315 IKDGEAVWFGCDVGKHFNSKLGLSDMNLYDHELVFGVSLKNMNK-------AERLTFGES 367
Query: 132 AVLHGCT 138
+ H T
Sbjct: 368 LMTHAMT 374
>pdb|3KRT|A Chain A, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|B Chain B, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|C Chain C, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|D Chain D, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
Length = 456
Score = 28.1 bits (61), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 6/76 (7%)
Query: 107 HVAKSNLSGKVLPTTIGDNV-TVGHSAVLHGCTVEDEAFVGMGATLLDGV-----VVERH 160
HV S+L+G VL T G N G V H +VE E+ G T+LD
Sbjct: 119 HVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCLSVELESSDGHNDTMLDPEQRIWGFETNF 178
Query: 161 GMVAAGSLVRQNTRIP 176
G +A +LV+ N +P
Sbjct: 179 GGLAEIALVKSNQLMP 194
>pdb|4AA7|A Chain A, E.Coli Glmu In Complex With An Antibacterial Inhibitor
pdb|4AA7|B Chain B, E.Coli Glmu In Complex With An Antibacterial Inhibitor
Length = 231
Score = 27.3 bits (59), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 8/59 (13%)
Query: 122 IGDNVTVGHSAVLHG--------CTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQN 172
IGDNV +G + + D+ FVG L+ V V + +AAG+ V +N
Sbjct: 147 IGDNVNIGAGTITCNYDGANKFKTIIGDDVFVGSDTQLVAPVTVGKGATIAAGTTVTRN 205
>pdb|3EG4|A Chain A, Crystal Structure Of 2,3,4,5-Tetrahydropyridine-2-
Carboxylate N-Succinyltransferase From Brucella
Melitensis Biovar Abortus 2308
Length = 304
Score = 27.3 bits (59), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 61/133 (45%), Gaps = 22/133 (16%)
Query: 55 VDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLS 114
V A++AP+A ++ V G+ + G ++ +VGS I N VH++
Sbjct: 138 VRHSAYIAPNAILMPSF-VNLGAYVDKGAMID---TWATVGSCAQIGKN--VHLSGGVGI 191
Query: 115 GKVL-PTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNT 173
G VL P G + +ED F+G + +++G +V ++ G + ++T
Sbjct: 192 GGVLEPMQAGPTI------------IEDNCFIGARSEVVEGCIVREGSVLGMGVFIGKST 239
Query: 174 RI---PSGEVWGG 183
+I +GEV+ G
Sbjct: 240 KIVDRATGEVFYG 252
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.134 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,967,307
Number of Sequences: 62578
Number of extensions: 324439
Number of successful extensions: 997
Number of sequences better than 100.0: 82
Number of HSP's better than 100.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 46
Number of HSP's that attempted gapping in prelim test: 872
Number of HSP's gapped (non-prelim): 115
length of query: 270
length of database: 14,973,337
effective HSP length: 97
effective length of query: 173
effective length of database: 8,903,271
effective search space: 1540265883
effective search space used: 1540265883
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 51 (24.3 bits)