BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024224
(270 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FWR5|GCA1_ARATH Gamma carbonic anhydrase 1, mitochondrial OS=Arabidopsis thaliana
GN=GAMMACA1 PE=1 SV=1
Length = 275
Score = 482 bits (1240), Expect = e-135, Method: Compositional matrix adjust.
Identities = 227/270 (84%), Positives = 249/270 (92%)
Query: 1 MGTLGRAVYTVGFWIRETGQALDRLGCRLQGNYYFQEQLSRHRTLMNIFDKAPAVDKDAF 60
MGTLGRA Y+VGFWIRETGQALDRLGCRLQG YF+EQLSRHRTLMN+FDKAP VDK+AF
Sbjct: 1 MGTLGRAFYSVGFWIRETGQALDRLGCRLQGKNYFREQLSRHRTLMNVFDKAPIVDKEAF 60
Query: 61 VAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPT 120
VAPSAS+IGDV +GRGSSIWYGCVLRGDVN++SVGSGTNIQDNSLVHVAKSNLSGKV PT
Sbjct: 61 VAPSASVIGDVHIGRGSSIWYGCVLRGDVNTVSVGSGTNIQDNSLVHVAKSNLSGKVHPT 120
Query: 121 TIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEV 180
IGDNVT+GHSAVLHGCTVEDE F+GMGATLLDGVVVE+HGMVAAG+LVRQNTRIPSGEV
Sbjct: 121 IIGDNVTIGHSAVLHGCTVEDETFIGMGATLLDGVVVEKHGMVAAGALVRQNTRIPSGEV 180
Query: 181 WGGNPAKFLRKLTDEEIAFISQSATNYSNLAQVHAAENAKSFDEIEFEKVLRKKFARRDE 240
WGGNPA+FLRKLTDEEIAFISQSATNYSNLAQ HAAENAK + IEFEKVLRKK A +DE
Sbjct: 181 WGGNPARFLRKLTDEEIAFISQSATNYSNLAQAHAAENAKPLNVIEFEKVLRKKHALKDE 240
Query: 241 EYDSMLGVVRETPQEIIVPDSIKDPKSLQK 270
EYDSMLG+VRETP E+ +P++I K ++
Sbjct: 241 EYDSMLGIVRETPPELNLPNNILPDKETKR 270
>sp|Q9C6B3|GCA2_ARATH Gamma carbonic anhydrase 2, mitochondrial OS=Arabidopsis thaliana
GN=GAMMACA2 PE=1 SV=1
Length = 278
Score = 459 bits (1180), Expect = e-128, Method: Compositional matrix adjust.
Identities = 210/262 (80%), Positives = 244/262 (93%)
Query: 1 MGTLGRAVYTVGFWIRETGQALDRLGCRLQGNYYFQEQLSRHRTLMNIFDKAPAVDKDAF 60
MGTLGRA+YTVG WIR TGQALDR+G LQG++ +E LSRHRTLMN+FDK+P VDKD F
Sbjct: 1 MGTLGRAIYTVGNWIRGTGQALDRVGSLLQGSHRIEEHLSRHRTLMNVFDKSPLVDKDVF 60
Query: 61 VAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPT 120
VAPSAS+IGDVQ+G+GSSIWYGCVLRGDVN+ISVGSGTNIQDN+LVHVAK+N+SGKVLPT
Sbjct: 61 VAPSASVIGDVQIGKGSSIWYGCVLRGDVNNISVGSGTNIQDNTLVHVAKTNISGKVLPT 120
Query: 121 TIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEV 180
IGDNVTVGHSAV+HGCTVED+AFVGMGATLLDGVVVE+H MVAAGSLV+QNTRIPSGEV
Sbjct: 121 LIGDNVTVGHSAVIHGCTVEDDAFVGMGATLLDGVVVEKHAMVAAGSLVKQNTRIPSGEV 180
Query: 181 WGGNPAKFLRKLTDEEIAFISQSATNYSNLAQVHAAENAKSFDEIEFEKVLRKKFARRDE 240
WGGNPAKF+RKLTDEEI +ISQSA NY NLAQ+HA+EN+KSF++IE E+ LRKK+AR+DE
Sbjct: 181 WGGNPAKFMRKLTDEEIVYISQSAKNYINLAQIHASENSKSFEQIEVERALRKKYARKDE 240
Query: 241 EYDSMLGVVRETPQEIIVPDSI 262
+YDSMLG+ RETP E+I+PD++
Sbjct: 241 DYDSMLGITRETPPELILPDNV 262
>sp|Q94AU7|GCA3_ARATH Gamma carbonic anhydrase 3, mitochondrial OS=Arabidopsis thaliana
GN=GAMMACA3 PE=1 SV=1
Length = 258
Score = 411 bits (1057), Expect = e-114, Method: Compositional matrix adjust.
Identities = 196/267 (73%), Positives = 227/267 (85%), Gaps = 10/267 (3%)
Query: 1 MGTLGRAVYTVGFWIRETGQALDRLGCRLQGNYYFQEQLSRHRTLMNIFDKAPAVDKDAF 60
MGT+G+A Y+VGFWIRETGQALDRLGCRLQG +F+EQLSRHRTLMN+FDK P VDK AF
Sbjct: 1 MGTMGKAFYSVGFWIRETGQALDRLGCRLQGKNHFREQLSRHRTLMNVFDKTPNVDKGAF 60
Query: 61 VAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPT 120
VAP+AS+ GDV VGRGSSIWYGCVLRGD NSISVG+GTNIQDN+LVHVAK+NLSGKVLPT
Sbjct: 61 VAPNASLSGDVHVGRGSSIWYGCVLRGDANSISVGAGTNIQDNALVHVAKTNLSGKVLPT 120
Query: 121 TIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEV 180
IGDNVT+GHSAVLHGCTVEDEA++G AT+LDG VE+H MVA+G+LVRQNTRIPSGEV
Sbjct: 121 VIGDNVTIGHSAVLHGCTVEDEAYIGTSATVLDGAHVEKHAMVASGALVRQNTRIPSGEV 180
Query: 181 WGGNPAKFLRKLTDEEIAFISQSATNYSNLAQVHAAENAKSFDEIEFEKVLRKKFARRDE 240
WGGNPAKFLRK+T+EE F S SA YSNLAQ HA ENAK+ DE EF+K+L KK A RD
Sbjct: 181 WGGNPAKFLRKVTEEERVFFSSSAVEYSNLAQAHATENAKNLDEAEFKKLLNKKNA-RDT 239
Query: 241 EYDSMLGVVRETPQEIIVPDSIKDPKS 267
EYDS+L ++ +P+++ PK+
Sbjct: 240 EYDSVL-------DDLTLPENV--PKA 257
>sp|Q54JC2|Y2881_DICDI Uncharacterized protein DDB_G0288155 OS=Dictyostelium discoideum
GN=DDB_G0288155 PE=1 SV=1
Length = 246
Score = 194 bits (494), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 98/236 (41%), Positives = 150/236 (63%), Gaps = 3/236 (1%)
Query: 11 VGFWIRETGQALDRLGCRLQGNYYFQEQLSRHRTLMNIFDKAPAVDKDAFVAPSASIIGD 70
+G ++ TG L R GC++QG+Y + E+L+RH L D AP V + +F+AP+ASIIGD
Sbjct: 10 LGEVVKNTGLILHRTGCKMQGDYAYVEKLNRHTRLTAFGDNAPIVGQKSFIAPNASIIGD 69
Query: 71 VQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPTTIGDNVTVGH 130
V +G+ SSIWY VLRGDVNSI +G T + D ++VH + + G PT IGD V +G
Sbjct: 70 VVIGKESSIWYNAVLRGDVNSIHIGDKTVVSDRTVVHCSSNGPLGPK-PTQIGDKVYIGP 128
Query: 131 SAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLR 190
+++H T+ E+F+G G+TL DG VVE++G + AGSL+ I SGE WGG+PAKF+R
Sbjct: 129 GSIVHAATILGESFIGTGSTLCDGSVVEKNGFLEAGSLLTAGKTIKSGEYWGGSPAKFIR 188
Query: 191 KLTDEEIAFISQSATNYSNLAQVHAAENAKSFDEIEFEKVLRKKFARRDEEYDSML 246
++T ++ + + + NL++ H + +KS E+ + L +K+ + D +L
Sbjct: 189 QVTKDDESQLEKIIEQNINLSEQHEKQTSKSAKELNND--LLQKYVKNRTRSDHIL 242
>sp|Q9FMV1|GCAL1_ARATH Gamma carbonic anhydrase-like 1, mitochondrial OS=Arabidopsis
thaliana GN=GAMMACAL1 PE=1 SV=1
Length = 252
Score = 145 bits (365), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 119/194 (61%), Gaps = 4/194 (2%)
Query: 42 HRTLMNIFDKAPAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQ 101
R ++ + P V DA+VAP+ + G V V GSS+W G VLRGD+N I+VG +N+Q
Sbjct: 55 QRQIIPLGQWLPKVAVDAYVAPNVVLAGQVTVWDGSSVWNGAVLRGDLNKITVGFCSNVQ 114
Query: 102 DNSLVHVAKSNLSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHG 161
+ +VH A S+ +G T I VTVG ++L CT+E E +G + L++G +VE
Sbjct: 115 ERCVVHAAWSSPTGLPAATIIDRYVTVGAYSLLRSCTIEPECIIGQHSILMEGSLVETRS 174
Query: 162 MVAAGSLVRQNTRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNLAQVHAAE---N 218
++ AGS+V RIPSGE+WGGNPA+F+R LT+EE I + A ++L+ + +E
Sbjct: 175 ILEAGSVVPPGRRIPSGELWGGNPARFIRTLTNEETLEIPKLAVAINHLSGDYFSEFLPY 234
Query: 219 AKSFDEIE-FEKVL 231
+ + E+E F+K L
Sbjct: 235 STVYLEVEKFKKSL 248
>sp|Q9SMN1|GCAL2_ARATH Gamma carbonic anhydrase-like 2, mitochondrial OS=Arabidopsis
thaliana GN=GAMMACAL2 PE=1 SV=1
Length = 256
Score = 143 bits (361), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 110/176 (62%)
Query: 42 HRTLMNIFDKAPAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQ 101
R ++ + P V DA+VAP+ + G V V GSS+W G VLRGD+N I+VG +N+Q
Sbjct: 59 QRQIIPLGQWLPKVAVDAYVAPNVVLAGQVTVWDGSSVWNGAVLRGDLNKITVGFCSNVQ 118
Query: 102 DNSLVHVAKSNLSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHG 161
+ +VH A S+ +G T I VTVG ++L CT+E E +G + L++G +VE
Sbjct: 119 ERCVVHAAWSSPTGLPAQTLIDRYVTVGAYSLLRSCTIEPECIIGQHSILMEGSLVETRS 178
Query: 162 MVAAGSLVRQNTRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNLAQVHAAE 217
++ AGS++ RIPSGE+WGGNPA+F+R LT+EE I + A ++L+ + +E
Sbjct: 179 ILEAGSVLPPGRRIPSGELWGGNPARFIRTLTNEETLEIPKLAVAINHLSGDYFSE 234
>sp|P0A9X0|YRDA_SHIFL Protein YrdA OS=Shigella flexneri GN=yrdA PE=3 SV=1
Length = 184
Score = 141 bits (356), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 73/159 (45%), Positives = 104/159 (65%), Gaps = 1/159 (0%)
Query: 50 DKAPAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVA 109
D P + + + S+ +IGDV++ IW V+RGDV+ + +G+ TNIQD S++HV
Sbjct: 10 DLFPQIGQRVMIDDSSVVIGDVRLADDVGIWPLVVIRGDVHYVQIGARTNIQDGSMLHVT 69
Query: 110 -KSNLSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSL 168
KS+ + P TIG++VTVGH +LHGCT+ + VGMG+ LLDG +VE M+ AGSL
Sbjct: 70 HKSSYNPDGNPLTIGEDVTVGHKVMLHGCTIGNRVLVGMGSILLDGAIVEDDVMIGAGSL 129
Query: 169 VRQNTRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNY 207
V QN R+ SG ++ G+P K +R L+DEE A + SA NY
Sbjct: 130 VPQNKRLESGYLYLGSPVKQIRPLSDEEKAGLRYSANNY 168
>sp|P0A9W9|YRDA_ECOLI Protein YrdA OS=Escherichia coli (strain K12) GN=yrdA PE=1 SV=1
Length = 184
Score = 141 bits (356), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 73/159 (45%), Positives = 104/159 (65%), Gaps = 1/159 (0%)
Query: 50 DKAPAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVA 109
D P + + + S+ +IGDV++ IW V+RGDV+ + +G+ TNIQD S++HV
Sbjct: 10 DLFPQIGQRVMIDDSSVVIGDVRLADDVGIWPLVVIRGDVHYVQIGARTNIQDGSMLHVT 69
Query: 110 -KSNLSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSL 168
KS+ + P TIG++VTVGH +LHGCT+ + VGMG+ LLDG +VE M+ AGSL
Sbjct: 70 HKSSYNPDGNPLTIGEDVTVGHKVMLHGCTIGNRVLVGMGSILLDGAIVEDDVMIGAGSL 129
Query: 169 VRQNTRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNY 207
V QN R+ SG ++ G+P K +R L+DEE A + SA NY
Sbjct: 130 VPQNKRLESGYLYLGSPVKQIRPLSDEEKAGLRYSANNY 168
>sp|Q57752|Y304_METJA Uncharacterized protein MJ0304 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0304 PE=3 SV=1
Length = 159
Score = 137 bits (346), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 100/158 (63%), Gaps = 6/158 (3%)
Query: 55 VDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLS 114
+ K+ +A A I+GDV +G SS+WY V+RGDV+ I +G+ +NIQD +VH +K
Sbjct: 2 ISKNVRIAKGAVIVGDVTIGDYSSVWYNAVIRGDVDKIIIGNYSNIQDCCVVHCSKG--- 58
Query: 115 GKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTR 174
PT IGD V++GH AV+HGC +ED VGM AT+L+G + + ++ A +LV QN
Sbjct: 59 ---YPTIIGDYVSIGHGAVIHGCRIEDNVLVGMNATILNGAKIGENCIIGANALVTQNKE 115
Query: 175 IPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNLAQ 212
IP + G P + +R+LT+EEI I ++A Y L++
Sbjct: 116 IPPNSLVLGVPGRVVRELTEEEIKSIKENALRYVKLSE 153
>sp|P40882|Y3753_PSEAE Uncharacterized protein PA3753 OS=Pseudomonas aeruginosa (strain
ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=PA3753
PE=3 SV=2
Length = 174
Score = 124 bits (311), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 102/158 (64%), Gaps = 6/158 (3%)
Query: 58 DAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKV 117
D+++APSA++IG V++ G+S+W+G VLRGD I +G +N+QD S++H
Sbjct: 15 DSWIAPSAAVIGKVRLDAGASVWFGAVLRGDNELIHIGEHSNVQDGSVMHTDMG------ 68
Query: 118 LPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPS 177
P T+G VTVGH+A+LHGC+V D + VG+ A +L+G + ++ ++ A +L+ + IP
Sbjct: 69 YPLTLGKGVTVGHNAMLHGCSVGDYSLVGINAVILNGAKIGKYCIIGANALIPEGKEIPD 128
Query: 178 GEVWGGNPAKFLRKLTDEEIAFISQSATNYSNLAQVHA 215
G + G+P K +R+L++ + + SA +Y + A+ +A
Sbjct: 129 GSLVMGSPGKVVRELSEPQKKMLEASAAHYVHNARRYA 166
>sp|P77181|PAAY_ECOLI Phenylacetic acid degradation protein PaaY OS=Escherichia coli
(strain K12) GN=paaY PE=3 SV=1
Length = 196
Score = 115 bits (287), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 104/191 (54%), Gaps = 15/191 (7%)
Query: 53 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSN 112
P V +++FV P+A +IGDV +G+G + LRGD I V G NIQDN ++H
Sbjct: 11 PVVPEESFVHPTAVLIGDVILGKGVYVGPNASLRGDFGRIVVKDGANIQDNCVMHGFPEQ 70
Query: 113 LSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQN 172
T +G++ +GHSA+LHGC + A VGM A ++DG V+ + +V A + V+
Sbjct: 71 ------DTVVGEDGHIGHSAILHGCIIRRNALVGMNAVVMDGAVIGENSIVGASAFVKAK 124
Query: 173 TRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNLA-----QVHAAENAKSFD---- 223
+P+ + G+PAK +R+L+++E+A+ Q Y L +H E + +
Sbjct: 125 AEMPANYLIVGSPAKAIRELSEQELAWKKQGTHEYQVLVTRCKQTLHQVEPLREIEPGRK 184
Query: 224 EIEFEKVLRKK 234
+ F++ LR K
Sbjct: 185 RLVFDENLRPK 195
>sp|O34696|YTOA_BACSU Uncharacterized transferase YtoA OS=Bacillus subtilis (strain 168)
GN=ytoA PE=3 SV=1
Length = 171
Score = 110 bits (275), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 89/165 (53%), Gaps = 6/165 (3%)
Query: 50 DKAPAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVA 109
+ P + AF+A +A+I GDV +G SSIW+ V+RGDV +G+ NIQD S +H +
Sbjct: 7 EHKPDIHPTAFIADNATITGDVVIGEQSSIWFSVVIRGDVAPTRIGNRVNIQDLSCLHQS 66
Query: 110 KSNLSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLV 169
+ K L I D+ T+GH LH + A +GMG+ +LDG + + AGSLV
Sbjct: 67 PN----KTL--LIEDDATIGHQVTLHSAVIRKNALIGMGSIILDGAEIGEGAFIGAGSLV 120
Query: 170 RQNTRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNLAQVH 214
IP G + G PAK +R LT+E+ + + + Y Q +
Sbjct: 121 PPGKIIPPGHLAFGRPAKVIRPLTEEDRKDMQRIRSEYVEKGQYY 165
>sp|Q8Z9L6|CAIE_SALTI Carnitine operon protein CaiE OS=Salmonella typhi GN=caiE PE=3 SV=1
Length = 198
Score = 105 bits (263), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 91/159 (57%), Gaps = 6/159 (3%)
Query: 53 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSN 112
P V DAFV PSA +IGDV VG G I LRGD + + +G+N+QD ++H
Sbjct: 11 PVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGSNLQDGCIMHGYCDT 70
Query: 113 LSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQN 172
T + +N +GH A+LHGC V +A VGM + ++DG V+ +VAA S V+
Sbjct: 71 ------DTIVHENGHIGHGAILHGCVVGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAG 124
Query: 173 TRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNLA 211
+ + ++ G+PA+ LR++TD+E+ + + Y +LA
Sbjct: 125 FQGEARQLLVGSPARVLRQVTDQELYWKRLNTKEYQDLA 163
>sp|Q8ZRX6|CAIE_SALTY Carnitine operon protein CaiE OS=Salmonella typhimurium (strain LT2
/ SGSC1412 / ATCC 700720) GN=caiE PE=3 SV=1
Length = 198
Score = 105 bits (263), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 91/159 (57%), Gaps = 6/159 (3%)
Query: 53 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSN 112
P V DAFV PSA +IGDV VG G I LRGD + + +G+N+QD ++H
Sbjct: 11 PVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGSNLQDGCIMHGYCDT 70
Query: 113 LSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQN 172
T + +N +GH A+LHGC V +A VGM + ++DG V+ +VAA S V+
Sbjct: 71 ------DTIVHENGHIGHGAILHGCVVGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAG 124
Query: 173 TRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNLA 211
+ + ++ G+PA+ LR++TD+E+ + + Y +LA
Sbjct: 125 FQGEARQLLVGSPARVLRQVTDQELHWKHLNTKEYQDLA 163
>sp|B4TWR2|CAIE_SALSV Carnitine operon protein CaiE OS=Salmonella schwarzengrund (strain
CVM19633) GN=caiE PE=3 SV=1
Length = 198
Score = 105 bits (263), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 91/159 (57%), Gaps = 6/159 (3%)
Query: 53 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSN 112
P V DAFV PSA +IGDV VG G I LRGD + + +G+N+QD ++H
Sbjct: 11 PVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGSNLQDGCIMHGYCDT 70
Query: 113 LSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQN 172
T + +N +GH A+LHGC V +A VGM + ++DG V+ +VAA S V+
Sbjct: 71 ------DTIVHENGHIGHGAILHGCVVGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAG 124
Query: 173 TRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNLA 211
+ + ++ G+PA+ LR++TD+E+ + + Y +LA
Sbjct: 125 FQGEARQLLVGSPARVLRQVTDQELHWKRLNTKEYQDLA 163
>sp|B5BL53|CAIE_SALPK Carnitine operon protein CaiE OS=Salmonella paratyphi A (strain
AKU_12601) GN=caiE PE=3 SV=1
Length = 198
Score = 105 bits (263), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 91/159 (57%), Gaps = 6/159 (3%)
Query: 53 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSN 112
P V DAFV PSA +IGDV VG G I LRGD + + +G+N+QD ++H
Sbjct: 11 PVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGSNLQDGCIMHGYCDT 70
Query: 113 LSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQN 172
T + +N +GH A+LHGC V +A VGM + ++DG V+ +VAA S V+
Sbjct: 71 ------DTIVHENGHIGHGAILHGCVVGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAG 124
Query: 173 TRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNLA 211
+ + ++ G+PA+ LR++TD+E+ + + Y +LA
Sbjct: 125 FQGEARQLLVGSPARVLRQVTDQELHWKRLNTKEYQDLA 163
>sp|C0Q4L1|CAIE_SALPC Carnitine operon protein CaiE OS=Salmonella paratyphi C (strain
RKS4594) GN=caiE PE=3 SV=1
Length = 198
Score = 105 bits (263), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 91/159 (57%), Gaps = 6/159 (3%)
Query: 53 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSN 112
P V DAFV PSA +IGDV VG G I LRGD + + +G+N+QD ++H
Sbjct: 11 PVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGSNLQDGCIMHGYCDT 70
Query: 113 LSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQN 172
T + +N +GH A+LHGC V +A VGM + ++DG V+ +VAA S V+
Sbjct: 71 ------DTIVHENGHIGHGAILHGCVVGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAG 124
Query: 173 TRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNLA 211
+ + ++ G+PA+ LR++TD+E+ + + Y +LA
Sbjct: 125 FQGEARQLLVGSPARVLRQVTDQELHWKRLNTKEYQDLA 163
>sp|Q5PIL2|CAIE_SALPA Carnitine operon protein CaiE OS=Salmonella paratyphi A (strain
ATCC 9150 / SARB42) GN=caiE PE=3 SV=1
Length = 198
Score = 105 bits (263), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 91/159 (57%), Gaps = 6/159 (3%)
Query: 53 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSN 112
P V DAFV PSA +IGDV VG G I LRGD + + +G+N+QD ++H
Sbjct: 11 PVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGSNLQDGCIMHGYCDT 70
Query: 113 LSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQN 172
T + +N +GH A+LHGC V +A VGM + ++DG V+ +VAA S V+
Sbjct: 71 ------DTIVHENGHIGHGAILHGCVVGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAG 124
Query: 173 TRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNLA 211
+ + ++ G+PA+ LR++TD+E+ + + Y +LA
Sbjct: 125 FQGEARQLLVGSPARVLRQVTDQELHWKRLNTKEYQDLA 163
>sp|B4T6J4|CAIE_SALNS Carnitine operon protein CaiE OS=Salmonella newport (strain SL254)
GN=caiE PE=3 SV=1
Length = 198
Score = 105 bits (263), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 91/159 (57%), Gaps = 6/159 (3%)
Query: 53 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSN 112
P V DAFV PSA +IGDV VG G I LRGD + + +G+N+QD ++H
Sbjct: 11 PVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGSNLQDGCIMHGYCDT 70
Query: 113 LSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQN 172
T + +N +GH A+LHGC V +A VGM + ++DG V+ +VAA S V+
Sbjct: 71 ------DTIVHENGHIGHGAILHGCVVGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAG 124
Query: 173 TRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNLA 211
+ + ++ G+PA+ LR++TD+E+ + + Y +LA
Sbjct: 125 FQGEARQLLVGSPARVLRQVTDQELHWKRLNTKEYQDLA 163
>sp|B4TIG8|CAIE_SALHS Carnitine operon protein CaiE OS=Salmonella heidelberg (strain
SL476) GN=caiE PE=3 SV=1
Length = 198
Score = 105 bits (263), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 91/159 (57%), Gaps = 6/159 (3%)
Query: 53 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSN 112
P V DAFV PSA +IGDV VG G I LRGD + + +G+N+QD ++H
Sbjct: 11 PVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGSNLQDGCIMHGYCDT 70
Query: 113 LSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQN 172
T + +N +GH A+LHGC V +A VGM + ++DG V+ +VAA S V+
Sbjct: 71 ------DTIVHENGHIGHGAILHGCVVGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAG 124
Query: 173 TRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNLA 211
+ + ++ G+PA+ LR++TD+E+ + + Y +LA
Sbjct: 125 FQGEARQLLVGSPARVLRQVTDQELHWKRLNTKEYQDLA 163
>sp|B5RGA3|CAIE_SALG2 Carnitine operon protein CaiE OS=Salmonella gallinarum (strain
287/91 / NCTC 13346) GN=caiE PE=3 SV=1
Length = 198
Score = 105 bits (263), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 91/159 (57%), Gaps = 6/159 (3%)
Query: 53 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSN 112
P V DAFV PSA +IGDV VG G I LRGD + + +G+N+QD ++H
Sbjct: 11 PVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGSNLQDGCIMHGYCDT 70
Query: 113 LSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQN 172
T + +N +GH A+LHGC V +A VGM + ++DG V+ +VAA S V+
Sbjct: 71 ------DTIVHENGHIGHGAILHGCVVGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAG 124
Query: 173 TRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNLA 211
+ + ++ G+PA+ LR++TD+E+ + + Y +LA
Sbjct: 125 FQGEARQLLVGSPARVLRQVTDQELHWKRLNTKEYQDLA 163
>sp|B5R1Q8|CAIE_SALEP Carnitine operon protein CaiE OS=Salmonella enteritidis PT4 (strain
P125109) GN=caiE PE=3 SV=1
Length = 198
Score = 105 bits (263), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 91/159 (57%), Gaps = 6/159 (3%)
Query: 53 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSN 112
P V DAFV PSA +IGDV VG G I LRGD + + +G+N+QD ++H
Sbjct: 11 PVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGSNLQDGCIMHGYCDT 70
Query: 113 LSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQN 172
T + +N +GH A+LHGC V +A VGM + ++DG V+ +VAA S V+
Sbjct: 71 ------DTIVHENGHIGHGAILHGCVVGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAG 124
Query: 173 TRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNLA 211
+ + ++ G+PA+ LR++TD+E+ + + Y +LA
Sbjct: 125 FQGEARQLLVGSPARVLRQVTDQELHWKRLNTKEYQDLA 163
>sp|B5FHG3|CAIE_SALDC Carnitine operon protein CaiE OS=Salmonella dublin (strain
CT_02021853) GN=caiE PE=3 SV=1
Length = 198
Score = 105 bits (262), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 91/159 (57%), Gaps = 6/159 (3%)
Query: 53 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSN 112
P V DAFV PSA +IGDV VG G I LRGD + + +G+N+QD ++H
Sbjct: 11 PVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGSNLQDGCIMHGYCDT 70
Query: 113 LSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQN 172
T + +N +GH A+LHGC V +A VGM + ++DG V+ +VAA S V+
Sbjct: 71 ------DTIVHENGHIGHGAILHGCVVGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAG 124
Query: 173 TRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNLA 211
+ + ++ G+PA+ LR++TD+E+ + + Y +LA
Sbjct: 125 FQGEARQLLVGSPARVLRQVTDQELHWKRLNTKEYQDLA 163
>sp|B5F748|CAIE_SALA4 Carnitine operon protein CaiE OS=Salmonella agona (strain SL483)
GN=caiE PE=3 SV=1
Length = 198
Score = 104 bits (260), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 91/159 (57%), Gaps = 6/159 (3%)
Query: 53 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSN 112
P V DAFV PSA +IGDV VG G I LRGD + + +G+N+QD ++H
Sbjct: 11 PVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGSNLQDGCIMHGYCDT 70
Query: 113 LSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQN 172
T + +N +GH A+LHGC V +A VGM + ++DG ++ +VAA S V+
Sbjct: 71 ------DTIVHENGHIGHGAILHGCVVGRDALVGMNSVIMDGAMIGEESIVAAMSFVKAG 124
Query: 173 TRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNLA 211
+ + ++ G+PA+ LR++TD+E+ + + Y +LA
Sbjct: 125 FQGEARQLLVGSPARVLRQVTDQELHWKRLNTKEYQDLA 163
>sp|Q1RGG3|CAIE_ECOUT Carnitine operon protein CaiE OS=Escherichia coli (strain UTI89 /
UPEC) GN=caiE PE=3 SV=2
Length = 196
Score = 104 bits (259), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 90/165 (54%), Gaps = 7/165 (4%)
Query: 53 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSN 112
P V AFV PSA +IGDV VG G I LRGD + V +G NIQD ++H
Sbjct: 11 PVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDT 70
Query: 113 LSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQN 172
T +G+N +GH A+LHGC + +A VGM + ++DG V+ +VAA S V+
Sbjct: 71 ------DTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAG 124
Query: 173 TRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNL-AQVHAA 216
R ++ G PA+ +R ++D+E+ + + Y +L + HAA
Sbjct: 125 FRGEKRQLLMGTPARAVRSVSDDELHWKRLNTKEYQDLVGRCHAA 169
>sp|Q8FLA7|CAIE_ECOL6 Carnitine operon protein CaiE OS=Escherichia coli O6:H1 (strain
CFT073 / ATCC 700928 / UPEC) GN=caiE PE=3 SV=2
Length = 196
Score = 104 bits (259), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 90/165 (54%), Gaps = 7/165 (4%)
Query: 53 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSN 112
P V AFV PSA +IGDV VG G I LRGD + V +G NIQD ++H
Sbjct: 11 PVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDT 70
Query: 113 LSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQN 172
T +G+N +GH A+LHGC + +A VGM + ++DG V+ +VAA S V+
Sbjct: 71 ------DTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAG 124
Query: 173 TRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNL-AQVHAA 216
R ++ G PA+ +R ++D+E+ + + Y +L + HAA
Sbjct: 125 FRGEKRQLLMGTPARAVRSVSDDELHWKRLNTKEYQDLVGRCHAA 169
>sp|Q0TLV4|CAIE_ECOL5 Carnitine operon protein CaiE OS=Escherichia coli O6:K15:H31
(strain 536 / UPEC) GN=caiE PE=3 SV=1
Length = 196
Score = 104 bits (259), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 90/165 (54%), Gaps = 7/165 (4%)
Query: 53 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSN 112
P V AFV PSA +IGDV VG G I LRGD + V +G NIQD ++H
Sbjct: 11 PVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDT 70
Query: 113 LSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQN 172
T +G+N +GH A+LHGC + +A VGM + ++DG V+ +VAA S V+
Sbjct: 71 ------DTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAG 124
Query: 173 TRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNL-AQVHAA 216
R ++ G PA+ +R ++D+E+ + + Y +L + HAA
Sbjct: 125 FRGEKRQLLMGTPARAVRSVSDDELHWKRLNTKEYQDLVGRCHAA 169
>sp|A1A785|CAIE_ECOK1 Carnitine operon protein CaiE OS=Escherichia coli O1:K1 / APEC
GN=caiE PE=3 SV=2
Length = 196
Score = 104 bits (259), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 90/165 (54%), Gaps = 7/165 (4%)
Query: 53 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSN 112
P V AFV PSA +IGDV VG G I LRGD + V +G NIQD ++H
Sbjct: 11 PVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDT 70
Query: 113 LSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQN 172
T +G+N +GH A+LHGC + +A VGM + ++DG V+ +VAA S V+
Sbjct: 71 ------DTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAG 124
Query: 173 TRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNL-AQVHAA 216
R ++ G PA+ +R ++D+E+ + + Y +L + HAA
Sbjct: 125 FRGEKRQLLMGTPARAVRSVSDDELHWKRLNTKEYQDLVGRCHAA 169
>sp|B7MAF8|CAIE_ECO45 Carnitine operon protein CaiE OS=Escherichia coli O45:K1 (strain
S88 / ExPEC) GN=caiE PE=3 SV=1
Length = 196
Score = 104 bits (259), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 90/165 (54%), Gaps = 7/165 (4%)
Query: 53 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSN 112
P V AFV PSA +IGDV VG G I LRGD + V +G NIQD ++H
Sbjct: 11 PVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDT 70
Query: 113 LSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQN 172
T +G+N +GH A+LHGC + +A VGM + ++DG V+ +VAA S V+
Sbjct: 71 ------DTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAG 124
Query: 173 TRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNL-AQVHAA 216
R ++ G PA+ +R ++D+E+ + + Y +L + HAA
Sbjct: 125 FRGEKRQLLMGTPARAVRSVSDDELHWKRLNTKEYQDLVGRCHAA 169
>sp|B7N7R0|CAIE_ECOLU Carnitine operon protein CaiE OS=Escherichia coli O17:K52:H18
(strain UMN026 / ExPEC) GN=caiE PE=3 SV=1
Length = 196
Score = 104 bits (259), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 93/177 (52%), Gaps = 11/177 (6%)
Query: 53 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSN 112
P V AFV PSA +IGDV VG G I LRGD + V +G NIQD ++H
Sbjct: 11 PVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDT 70
Query: 113 LSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQN 172
T +G+N +GH A+LHGC + +A VGM + ++DG V+ +VAA S V+
Sbjct: 71 ------DTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAG 124
Query: 173 TRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNL-----AQVHAAENAKSFDE 224
R ++ G PA+ +R ++D+E+ + + Y +L A +H + + +E
Sbjct: 125 FRGEKRQLLMGTPARAVRSVSDDELHWKRLNTKEYQDLVGRCHASLHETQPLRQMEE 181
>sp|B7MNP2|CAIE_ECO81 Carnitine operon protein CaiE OS=Escherichia coli O81 (strain ED1a)
GN=caiE PE=3 SV=1
Length = 196
Score = 104 bits (259), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 93/177 (52%), Gaps = 11/177 (6%)
Query: 53 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSN 112
P V AFV PSA +IGDV VG G I LRGD + V +G NIQD ++H
Sbjct: 11 PVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDT 70
Query: 113 LSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQN 172
T +G+N +GH A+LHGC + +A VGM + ++DG V+ +VAA S V+
Sbjct: 71 ------DTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAG 124
Query: 173 TRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNL-----AQVHAAENAKSFDE 224
R ++ G PA+ +R ++D+E+ + + Y +L A +H + + +E
Sbjct: 125 FRGEKRQLLMGTPARAVRSVSDDELHWKRLNTKEYQDLVGRCHASLHETQPLRQMEE 181
>sp|B7UI81|CAIE_ECO27 Carnitine operon protein CaiE OS=Escherichia coli O127:H6 (strain
E2348/69 / EPEC) GN=caiE PE=3 SV=1
Length = 196
Score = 104 bits (259), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 93/177 (52%), Gaps = 11/177 (6%)
Query: 53 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSN 112
P V AFV PSA +IGDV VG G I LRGD + V +G NIQD ++H
Sbjct: 11 PVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDT 70
Query: 113 LSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQN 172
T +G+N +GH A+LHGC + +A VGM + ++DG V+ +VAA S V+
Sbjct: 71 ------DTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAG 124
Query: 173 TRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNL-----AQVHAAENAKSFDE 224
R ++ G PA+ +R ++D+E+ + + Y +L A +H + + +E
Sbjct: 125 FRGEKRQLLMGTPARAVRSVSDDELHWKRLNTKEYQDLVGRCHASLHETQPLRQMEE 181
>sp|Q57TJ2|CAIE_SALCH Carnitine operon protein CaiE OS=Salmonella choleraesuis (strain
SC-B67) GN=caiE PE=3 SV=1
Length = 198
Score = 103 bits (258), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 90/159 (56%), Gaps = 6/159 (3%)
Query: 53 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSN 112
P V DAFV PSA +IGDV VG G I LRGD + +G+N+QD ++H
Sbjct: 11 PVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRQILEAGSNLQDGCIMHGYCDT 70
Query: 113 LSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQN 172
T + +N +GH A+LHGC V +A VGM + ++DG V+ +VAA S V+
Sbjct: 71 ------DTIVHENGHIGHGAILHGCVVGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAG 124
Query: 173 TRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNLA 211
+ + ++ G+PA+ LR++TD+E+ + + Y +LA
Sbjct: 125 FQGEARQLLVGSPARVLRQVTDQELHWKRLNTKEYQDLA 163
>sp|B7NHD9|CAIE_ECO7I Carnitine operon protein CaiE OS=Escherichia coli O7:K1 (strain
IAI39 / ExPEC) GN=caiE PE=3 SV=1
Length = 196
Score = 103 bits (257), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 93/177 (52%), Gaps = 11/177 (6%)
Query: 53 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSN 112
P V AFV PSA +IGDV VG G I LRGD + V +G NIQD ++H
Sbjct: 11 PVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDT 70
Query: 113 LSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQN 172
T +G+N +GH A+LHGC + +A VGM + ++DG V+ +VAA S V+
Sbjct: 71 ------DTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAISFVKAG 124
Query: 173 TRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNL-----AQVHAAENAKSFDE 224
R ++ G PA+ +R ++D+E+ + + Y +L A +H + + +E
Sbjct: 125 FRGEKRQLLMGTPARAVRNVSDDELHWKRLNTKEYQDLVGRCHASLHETQPLRQMEE 181
>sp|B1LFW8|CAIE_ECOSM Carnitine operon protein CaiE OS=Escherichia coli (strain SMS-3-5 /
SECEC) GN=caiE PE=3 SV=1
Length = 196
Score = 103 bits (256), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 90/165 (54%), Gaps = 7/165 (4%)
Query: 53 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSN 112
P V AFV PSA +IGDV VG G I LRGD + V +G NIQD ++H
Sbjct: 11 PVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLLVQAGANIQDGCIMHGYCDT 70
Query: 113 LSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQN 172
T +G+N +GH A+LHGC + +A VGM + ++DG V+ +VAA S V+
Sbjct: 71 ------DTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAG 124
Query: 173 TRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNL-AQVHAA 216
R ++ G PA+ +R ++D+E+ + + Y +L + HA+
Sbjct: 125 FRGEKRQLLMGTPARAVRSVSDDELHWKRLNTKEYQDLVGRCHAS 169
>sp|B5YYC9|CAIE_ECO5E Carnitine operon protein CaiE OS=Escherichia coli O157:H7 (strain
EC4115 / EHEC) GN=caiE PE=3 SV=1
Length = 196
Score = 102 bits (254), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 92/177 (51%), Gaps = 11/177 (6%)
Query: 53 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSN 112
P V AFV PSA +IGDV VG G I LRGD + V +G NIQD ++H
Sbjct: 11 PVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYTDT 70
Query: 113 LSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQN 172
T +G+N +GH A+LHGC + +A VGM + ++DG V+ +VAA S V+
Sbjct: 71 ------DTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAG 124
Query: 173 TRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNL-----AQVHAAENAKSFDE 224
++ G PA+ +R ++D+E+ + + Y +L A +H + + +E
Sbjct: 125 FHGEKRQLLMGTPARAVRSVSDDELHWKRLNTKEYQDLVGRCHASLHETQPLRQMEE 181
>sp|Q8XA36|CAIE_ECO57 Carnitine operon protein CaiE OS=Escherichia coli O157:H7 GN=caiE
PE=3 SV=2
Length = 196
Score = 102 bits (254), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 92/177 (51%), Gaps = 11/177 (6%)
Query: 53 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSN 112
P V AFV PSA +IGDV VG G I LRGD + V +G NIQD ++H
Sbjct: 11 PVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYTDT 70
Query: 113 LSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQN 172
T +G+N +GH A+LHGC + +A VGM + ++DG V+ +VAA S V+
Sbjct: 71 ------DTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAG 124
Query: 173 TRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNL-----AQVHAAENAKSFDE 224
++ G PA+ +R ++D+E+ + + Y +L A +H + + +E
Sbjct: 125 FHGEKRQLLMGTPARAVRSVSDDELHWKRLNTKEYQDLVGRCHASLHETQPLRQMEE 181
>sp|A9MYJ4|CAIE_SALPB Carnitine operon protein CaiE OS=Salmonella paratyphi B (strain
ATCC BAA-1250 / SPB7) GN=caiE PE=3 SV=1
Length = 198
Score = 102 bits (254), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 90/159 (56%), Gaps = 6/159 (3%)
Query: 53 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSN 112
P V DAFV PSA +IGDV VG G I LRGD + + +G+N+Q ++H
Sbjct: 11 PVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGSNLQYGCIMHGYCDT 70
Query: 113 LSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQN 172
T + +N +GH A+LHGC V +A VGM + ++DG V+ +VAA S V+
Sbjct: 71 ------DTIVHENGHIGHGAILHGCVVGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAG 124
Query: 173 TRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNLA 211
+ + ++ G+PA+ LR++TD+E+ + + Y +LA
Sbjct: 125 FQGEARQLLVGSPARVLRQVTDQELHWKRLNTKEYQDLA 163
>sp|P39206|CAIE_ECOLI Carnitine operon protein CaiE OS=Escherichia coli (strain K12)
GN=caiE PE=3 SV=2
Length = 196
Score = 102 bits (254), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 86/158 (54%), Gaps = 6/158 (3%)
Query: 53 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSN 112
P V AFV PSA +IGDV VG G I LRGD + V +G NIQD ++H
Sbjct: 11 PVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDT 70
Query: 113 LSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQN 172
T +G+N +GH A+LHGC + +A VGM + ++DG V+ +VAA S V+
Sbjct: 71 ------DTIVGENGHIGHGAILHGCLIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAG 124
Query: 173 TRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNL 210
R ++ G PA+ +R ++D+E+ + + Y +L
Sbjct: 125 FRGEKRQLLMGTPARAVRNVSDDELHWKRLNTKEYQDL 162
>sp|B1XBG0|CAIE_ECODH Carnitine operon protein CaiE OS=Escherichia coli (strain K12 /
DH10B) GN=caiE PE=3 SV=1
Length = 196
Score = 102 bits (254), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 86/158 (54%), Gaps = 6/158 (3%)
Query: 53 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSN 112
P V AFV PSA +IGDV VG G I LRGD + V +G NIQD ++H
Sbjct: 11 PVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDT 70
Query: 113 LSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQN 172
T +G+N +GH A+LHGC + +A VGM + ++DG V+ +VAA S V+
Sbjct: 71 ------DTIVGENGHIGHGAILHGCLIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAG 124
Query: 173 TRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNL 210
R ++ G PA+ +R ++D+E+ + + Y +L
Sbjct: 125 FRGEKRQLLMGTPARAVRNVSDDELHWKRLNTKEYQDL 162
>sp|C4ZPW1|CAIE_ECOBW Carnitine operon protein CaiE OS=Escherichia coli (strain K12 /
MC4100 / BW2952) GN=caiE PE=3 SV=1
Length = 196
Score = 102 bits (254), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 86/158 (54%), Gaps = 6/158 (3%)
Query: 53 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSN 112
P V AFV PSA +IGDV VG G I LRGD + V +G NIQD ++H
Sbjct: 11 PVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDT 70
Query: 113 LSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQN 172
T +G+N +GH A+LHGC + +A VGM + ++DG V+ +VAA S V+
Sbjct: 71 ------DTIVGENGHIGHGAILHGCLIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAG 124
Query: 173 TRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNL 210
R ++ G PA+ +R ++D+E+ + + Y +L
Sbjct: 125 FRGEKRQLLMGTPARAVRNVSDDELHWKRLNTKEYQDL 162
>sp|Q3Z5X4|CAIE_SHISS Carnitine operon protein CaiE OS=Shigella sonnei (strain Ss046)
GN=caiE PE=3 SV=2
Length = 196
Score = 102 bits (253), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 92/177 (51%), Gaps = 11/177 (6%)
Query: 53 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSN 112
P V AFV PSA +IGDV VG G I LRGD + V +G NIQD ++H
Sbjct: 11 PVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDT 70
Query: 113 LSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQN 172
T +G+N +GH A+LHGC + +A VGM + ++DG V+ +VAA S V+
Sbjct: 71 ------DTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAG 124
Query: 173 TRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNL-----AQVHAAENAKSFDE 224
++ G PA+ +R ++D+E+ + + Y +L A +H + + +E
Sbjct: 125 FHGEKRQLLMGTPARAVRSVSDDELHWKRLNTKEYQDLVGRCHASLHETQPLRQMEE 181
>sp|A7ZVY5|CAIE_ECOHS Carnitine operon protein CaiE OS=Escherichia coli O9:H4 (strain HS)
GN=caiE PE=3 SV=1
Length = 196
Score = 102 bits (253), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 92/177 (51%), Gaps = 11/177 (6%)
Query: 53 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSN 112
P V AFV PSA +IGDV VG G I LRGD + V +G NIQD ++H
Sbjct: 11 PVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDT 70
Query: 113 LSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQN 172
T +G+N +GH A+LHGC + +A VGM + ++DG V+ +VAA S V+
Sbjct: 71 ------DTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAG 124
Query: 173 TRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNL-----AQVHAAENAKSFDE 224
++ G PA+ +R ++D+E+ + + Y +L A +H + + +E
Sbjct: 125 FHGEKRQLLMGTPARAVRSVSDDELHWKRLNTKEYQDLVGRCHASLHETQPLRQMEE 181
>sp|B7M0D2|CAIE_ECO8A Carnitine operon protein CaiE OS=Escherichia coli O8 (strain IAI1)
GN=caiE PE=3 SV=1
Length = 196
Score = 102 bits (253), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 92/177 (51%), Gaps = 11/177 (6%)
Query: 53 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSN 112
P V AFV PSA +IGDV VG G I LRGD + V +G NIQD ++H
Sbjct: 11 PVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDT 70
Query: 113 LSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQN 172
T +G+N +GH A+LHGC + +A VGM + ++DG V+ +VAA S V+
Sbjct: 71 ------DTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAG 124
Query: 173 TRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNL-----AQVHAAENAKSFDE 224
++ G PA+ +R ++D+E+ + + Y +L A +H + + +E
Sbjct: 125 FHGEKRQLLMGTPARAVRSVSDDELHWKRLNTKEYQDLVGRCHASLHETQPLRQMEE 181
>sp|B7L4F8|CAIE_ECO55 Carnitine operon protein CaiE OS=Escherichia coli (strain 55989 /
EAEC) GN=caiE PE=3 SV=1
Length = 196
Score = 102 bits (253), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 92/177 (51%), Gaps = 11/177 (6%)
Query: 53 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSN 112
P V AFV PSA +IGDV VG G I LRGD + V +G NIQD ++H
Sbjct: 11 PVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDT 70
Query: 113 LSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQN 172
T +G+N +GH A+LHGC + +A VGM + ++DG V+ +VAA S V+
Sbjct: 71 ------DTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAG 124
Query: 173 TRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNL-----AQVHAAENAKSFDE 224
++ G PA+ +R ++D+E+ + + Y +L A +H + + +E
Sbjct: 125 FHGEKRQLLMGTPARAVRSVSDDELHWKRLNTKEYQDLVGRCHASLHETQPLRQMEE 181
>sp|A7ZHC6|CAIE_ECO24 Carnitine operon protein CaiE OS=Escherichia coli O139:H28 (strain
E24377A / ETEC) GN=caiE PE=3 SV=1
Length = 196
Score = 102 bits (253), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 92/177 (51%), Gaps = 11/177 (6%)
Query: 53 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSN 112
P V AFV PSA +IGDV VG G I LRGD + V +G NIQD ++H
Sbjct: 11 PVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDT 70
Query: 113 LSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQN 172
T +G+N +GH A+LHGC + +A VGM + ++DG V+ +VAA S V+
Sbjct: 71 ------DTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAG 124
Query: 173 TRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNL-----AQVHAAENAKSFDE 224
++ G PA+ +R ++D+E+ + + Y +L A +H + + +E
Sbjct: 125 FHGEKRQLLMGTPARAVRSVSDDELHWKRLNTKEYQDLVGRCHASLHETQPLRQMEE 181
>sp|Q83SQ8|CAIE_SHIFL Carnitine operon protein CaiE OS=Shigella flexneri GN=caiE PE=3
SV=2
Length = 196
Score = 101 bits (252), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 92/177 (51%), Gaps = 11/177 (6%)
Query: 53 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSN 112
P V AFV PSA +IGDV VG G I LRGD + V +G NIQD ++H
Sbjct: 11 PVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDT 70
Query: 113 LSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQN 172
T +G+N +GH A+LHGC + +A VGM + ++DG V+ +VAA S V+
Sbjct: 71 ------DTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAG 124
Query: 173 TRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNL-----AQVHAAENAKSFDE 224
++ G PA+ +R ++D+E+ + + Y +L A +H + + +E
Sbjct: 125 FSGEKRQLLMGTPARAVRSVSDDELHWKRLNTKEYQDLVGRCHASLHETQPLRQMEE 181
>sp|Q0T8F9|CAIE_SHIF8 Carnitine operon protein CaiE OS=Shigella flexneri serotype 5b
(strain 8401) GN=caiE PE=3 SV=2
Length = 196
Score = 101 bits (252), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 92/177 (51%), Gaps = 11/177 (6%)
Query: 53 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSN 112
P V AFV PSA +IGDV VG G I LRGD + V +G NIQD ++H
Sbjct: 11 PVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDT 70
Query: 113 LSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQN 172
T +G+N +GH A+LHGC + +A VGM + ++DG V+ +VAA S V+
Sbjct: 71 ------DTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAG 124
Query: 173 TRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNL-----AQVHAAENAKSFDE 224
++ G PA+ +R ++D+E+ + + Y +L A +H + + +E
Sbjct: 125 FSGEKRQLLMGTPARAVRSVSDDELHWKRLNTKEYQDLVGRCHASLHETQPLRQMEE 181
>sp|B1IRE1|CAIE_ECOLC Carnitine operon protein CaiE OS=Escherichia coli (strain ATCC 8739
/ DSM 1576 / Crooks) GN=caiE PE=3 SV=1
Length = 196
Score = 100 bits (249), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 92/177 (51%), Gaps = 11/177 (6%)
Query: 53 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSN 112
P V AFV PSA +IGDV VG G I LRGD + V +G NIQD ++H
Sbjct: 11 PIVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDT 70
Query: 113 LSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQN 172
T +G+N +GH A+LHGC + +A VGM + ++DG V+ +VAA S V+
Sbjct: 71 ------DTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAG 124
Query: 173 TRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNL-----AQVHAAENAKSFDE 224
++ G PA+ +R ++D+E+ + + Y +L A +H + + +E
Sbjct: 125 FSGEKRQLLIGTPARAVRSVSDDELHWKRLNTKEYQDLVGRCHASLHETQPLRQMEE 181
>sp|B7LWM6|CAIE_ESCF3 Carnitine operon protein CaiE OS=Escherichia fergusonii (strain
ATCC 35469 / DSM 13698 / CDC 0568-73) GN=caiE PE=3 SV=1
Length = 196
Score = 100 bits (248), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 7/165 (4%)
Query: 53 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSN 112
P V AFV PSA +IGDV VG G I LRGD + V +G NIQD ++H
Sbjct: 11 PVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDT 70
Query: 113 LSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQN 172
T +G+N +GH A+LHGC + +A VGM + ++DG V+ +VAA S V+
Sbjct: 71 ------DTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAG 124
Query: 173 TRIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYSNL-AQVHAA 216
++ G PA+ +R ++D+E+ + + Y +L + H A
Sbjct: 125 FSGEKRQLLMGTPARAVRSVSDDELRWKHLNTKEYQDLVGRCHVA 169
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.134 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 100,113,986
Number of Sequences: 539616
Number of extensions: 4138591
Number of successful extensions: 13874
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 365
Number of HSP's successfully gapped in prelim test: 731
Number of HSP's that attempted gapping in prelim test: 12313
Number of HSP's gapped (non-prelim): 1880
length of query: 270
length of database: 191,569,459
effective HSP length: 116
effective length of query: 154
effective length of database: 128,974,003
effective search space: 19861996462
effective search space used: 19861996462
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)