BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024225
(270 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9UTC5|YIDE_SCHPO Putative uridine kinase C227.14 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC227.14 PE=3 SV=1
Length = 235
Score = 122 bits (305), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 92/150 (61%), Gaps = 14/150 (9%)
Query: 109 IVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFHLYLSQLD 168
++GLAG PG+GKSTL A + K W ++ S ++ ++PMDGFH L +LD
Sbjct: 31 LIGLAGGPGSGKSTLCAILA----KAWNERFGS--------EIVKIIPMDGFHYSLEELD 78
Query: 169 AMEDPKEAHARRGAPWTFNPLLLLNCLKNLR--NQGSVYAPSFDHGVGDPVEDDILVGLQ 226
++P++A A RGA WTF+ L + ++ ++ +YAPSFDH +GDPV DDI V +
Sbjct: 79 RFDNPEKARALRGAEWTFDADLFYSLVRLMKKITDRELYAPSFDHAIGDPVVDDICVEPK 138
Query: 227 HKVVIVDGNYLFLDGGVWKDVSSMFDEKCY 256
++++I +GNYL L+ W D ++D K Y
Sbjct: 139 NRILIFEGNYLLLNKPPWSDACKLYDIKAY 168
>sp|C5DNG5|YFH7_LACTC ATP-dependent kinase YFH7 OS=Lachancea thermotolerans (strain ATCC
56472 / CBS 6340 / NRRL Y-8284) GN=YFH7 PE=3 SV=1
Length = 347
Score = 79.3 bits (194), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 90/215 (41%), Gaps = 51/215 (23%)
Query: 75 IPVVEARCMDEVYDAL-----AQRLLPTSALASNVNVKHIVGLAGPPGAGKSTLAAEVVR 129
IP E + + +V + Q P + N + +VG+ G P +
Sbjct: 81 IPKFEEKSLHDVQNGFFNHVQDQDFQPKKFVDKNDGSEVVVGIGGLPNS----------I 130
Query: 130 RINKIWPQKASSFDSQVKPPDVATVLPMDGFHLYLSQLDAMEDPKEAHARRGAPWTFN-- 187
R+ + P + S+ D ++ A ++PMDGFHL LD +DP EAH RRG+P TF+
Sbjct: 131 RVENVAPLEPSNHDYKI-----AKIVPMDGFHLSRRHLDHFDDPVEAHRRRGSPPTFDSN 185
Query: 188 ------PLLLLNCL--------KNLRNQG---------------SVYAPSFDHGVGDPVE 218
LL C K + G S+Y P FDH + DP
Sbjct: 186 NCLQLCKLLAKTCTIKPTLPVNKTTADTGTLFDKISDTFSESVPSIYVPGFDHALKDPST 245
Query: 219 DDILVGLQHKVVIVDGNYLFLDGGVWKDVSSMFDE 253
V ++++++G YL LD W+D+ F +
Sbjct: 246 GQHCVDAFTRIIVLEGLYLLLDEDNWRDIYPTFKD 280
Score = 32.7 bits (73), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 28/51 (54%)
Query: 85 EVYDALAQRLLPTSALASNVNVKHIVGLAGPPGAGKSTLAAEVVRRINKIW 135
E + LA ++L + N + V + GPPG+GKST++ ++ IN +
Sbjct: 4 ETAEGLADQVLKFLSDKLETNYRVAVIVVGPPGSGKSTISEKLCHEINSRY 54
>sp|P11664|YGGC_ECOLI Uncharacterized protein YggC OS=Escherichia coli (strain K12)
GN=yggC PE=4 SV=2
Length = 237
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 88/179 (49%), Gaps = 25/179 (13%)
Query: 78 VEARCMDEVYDALAQRLLPTSALASNVNVKH--IVGLAGPPGAGKSTLAAEVVRRINKIW 135
++A+ +E + + + LL A VN + +V L PPG GKSTL W
Sbjct: 12 IQAQYQNEEIENVHKPLLHMLAALQTVNPQRRTVVFLCAPPGTGKSTLTT--------FW 63
Query: 136 PQKASSFDSQVKPPDVATVLPMDGFHLYLSQLDAMEDPKEAHARRGAPWTFNPLLLLNCL 195
A D ++ P + T LPMDGFH Y S LDA + +GAP TF+ +
Sbjct: 64 EYLAQQ-DPEL--PAIQT-LPMDGFHHYNSWLDA----HQLRPFKGAPETFD---VAKLT 112
Query: 196 KNLRN--QGSVYAPSFDHGVGDPVEDDILVGLQHKVVIVDGNYLFLDGGVWKDVSSMFD 252
+NLR +G P +D DPVED + V +VIV+GN+L LD W +++S D
Sbjct: 113 ENLRQVVEGDCTWPQYDRQKHDPVEDALHVTA--PLVIVEGNWLLLDDEKWLELASFCD 169
>sp|A7A245|YFH7_YEAS7 ATP-dependent kinase YFH7 OS=Saccharomyces cerevisiae (strain
YJM789) GN=YFH7 PE=3 SV=1
Length = 353
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 55/127 (43%), Gaps = 29/127 (22%)
Query: 150 DVATVLPMDGFHLYLSQLDAMEDPKEAHARRGAPWTFNPLLLLNCLKNLRNQG------- 202
++A ++PMDGFHL LD +DP+ AH RRG+P TF+ L K L
Sbjct: 154 NIAQIVPMDGFHLSRRCLDLFKDPQTAHKRRGSPSTFDSNNFLQLCKILAKTSLCKVSSH 213
Query: 203 ----------------------SVYAPSFDHGVGDPVEDDILVGLQHKVVIVDGNYLFLD 240
++ P F+H + DP D + ++VI++G YL D
Sbjct: 214 HKFYSTSSVFEKLSKTFSQTIPDIFVPGFNHALKDPTPDQYCISKFTRIVILEGLYLLYD 273
Query: 241 GGVWKDV 247
WK +
Sbjct: 274 QENWKKI 280
>sp|B5VI33|YFH7_YEAS6 ATP-dependent kinase YFH7 OS=Saccharomyces cerevisiae (strain
AWRI1631) GN=YFH7 PE=3 SV=1
Length = 353
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 55/127 (43%), Gaps = 29/127 (22%)
Query: 150 DVATVLPMDGFHLYLSQLDAMEDPKEAHARRGAPWTFNPLLLLNCLKNLRNQG------- 202
++A ++PMDGFHL LD +DP+ AH RRG+P TF+ L K L
Sbjct: 154 NIAQIVPMDGFHLSRRCLDLFKDPQTAHKRRGSPSTFDSNNFLQLCKILAKTSLCKVSSH 213
Query: 203 ----------------------SVYAPSFDHGVGDPVEDDILVGLQHKVVIVDGNYLFLD 240
++ P F+H + DP D + ++VI++G YL D
Sbjct: 214 HKFYSTSSVFEKLSKTFSQTIPDIFVPGFNHALKDPTPDQYCISKFTRIVILEGLYLLYD 273
Query: 241 GGVWKDV 247
WK +
Sbjct: 274 QENWKKI 280
>sp|B3LUL5|YFH7_YEAS1 ATP-dependent kinase YFH7 OS=Saccharomyces cerevisiae (strain
RM11-1a) GN=YFH7 PE=3 SV=1
Length = 353
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 55/127 (43%), Gaps = 29/127 (22%)
Query: 150 DVATVLPMDGFHLYLSQLDAMEDPKEAHARRGAPWTFNPLLLLNCLKNLRNQG------- 202
++A ++PMDGFHL LD +DP+ AH RRG+P TF+ L K L
Sbjct: 154 NIAQIVPMDGFHLSRRCLDLFKDPQTAHKRRGSPSTFDSNNFLQLCKILAKTSLCKVSSH 213
Query: 203 ----------------------SVYAPSFDHGVGDPVEDDILVGLQHKVVIVDGNYLFLD 240
++ P F+H + DP D + ++VI++G YL D
Sbjct: 214 HKFYSTSSVFEKLSKTFSQTIPDIFVPGFNHALKDPTPDQYCISKFTRIVILEGLYLLYD 273
Query: 241 GGVWKDV 247
WK +
Sbjct: 274 QENWKKI 280
>sp|C7GYB3|YFH7_YEAS2 ATP-dependent kinase YFH7 OS=Saccharomyces cerevisiae (strain
JAY291) GN=YFH7 PE=3 SV=1
Length = 353
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 55/127 (43%), Gaps = 29/127 (22%)
Query: 150 DVATVLPMDGFHLYLSQLDAMEDPKEAHARRGAPWTFNPLLLLNCLKNLRNQG------- 202
++A ++PMDGFHL LD +DP+ AH RRG+P TF+ L K L
Sbjct: 154 NIAQIVPMDGFHLSRRCLDLFKDPQTAHKRRGSPSTFDSNNFLQLCKILAKTSLCKVSSH 213
Query: 203 ----------------------SVYAPSFDHGVGDPVEDDILVGLQHKVVIVDGNYLFLD 240
++ P F+H + DP D + ++VI++G YL D
Sbjct: 214 HKFYSTSSVFEKLSKTFSQKIPDIFVPGFNHALKDPTPDQYCISKFTRIVILEGLYLLYD 273
Query: 241 GGVWKDV 247
WK +
Sbjct: 274 QENWKKI 280
>sp|P43591|YFH7_YEAST ATP-dependent kinase YFH7 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=YFH7 PE=1 SV=1
Length = 353
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 55/127 (43%), Gaps = 29/127 (22%)
Query: 150 DVATVLPMDGFHLYLSQLDAMEDPKEAHARRGAPWTFNPLLLLNCLKNLRNQG------- 202
++A ++PMDGFHL LD +DP+ AH RRG+P TF+ L K L
Sbjct: 154 NIAQIVPMDGFHLSRRCLDLFKDPQTAHKRRGSPSTFDSNNFLQLCKILAKTSLCKVSSH 213
Query: 203 ----------------------SVYAPSFDHGVGDPVEDDILVGLQHKVVIVDGNYLFLD 240
++ P F+H + DP D + ++VI++G YL D
Sbjct: 214 HKFYSTSSVFEKLSKTFSQTIPDIFVPGFNHALKDPTPDQYCISKFTRIVILEGLYLLYD 273
Query: 241 GGVWKDV 247
WK +
Sbjct: 274 QENWKKI 280
>sp|C8Z7U0|YFH7_YEAS8 ATP-dependent kinase YFH7 OS=Saccharomyces cerevisiae (strain
Lalvin EC1118 / Prise de mousse) GN=YFH7 PE=3 SV=1
Length = 353
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 55/127 (43%), Gaps = 29/127 (22%)
Query: 150 DVATVLPMDGFHLYLSQLDAMEDPKEAHARRGAPWTFNPLLLLNCLKNLRNQG------- 202
++A ++PMDGFHL LD +DP+ AH RRG+P TF+ L K L
Sbjct: 154 NIAQIVPMDGFHLSRRCLDLFKDPQTAHKRRGSPSTFDSNNFLQLCKILAKTSLCKVSSH 213
Query: 203 ----------------------SVYAPSFDHGVGDPVEDDILVGLQHKVVIVDGNYLFLD 240
++ P F+H + DP D + ++VI++G YL D
Sbjct: 214 HKFYSTSSVFEKLSKTFSQTIPDIFVPGFNHALKDPTPDQYCISKFTRIVILEGLYLLYD 273
Query: 241 GGVWKDV 247
WK +
Sbjct: 274 QENWKKI 280
>sp|C5DXG0|YFH7_ZYGRC ATP-dependent kinase YFH7 OS=Zygosaccharomyces rouxii (strain ATCC
2623 / CBS 732 / NBRC 1130 / NCYC 568 / NRRL Y-229)
GN=YFH7 PE=3 SV=1
Length = 375
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 68/169 (40%), Gaps = 43/169 (25%)
Query: 108 HIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFHLYLSQL 167
I+G G P A + N + P + SSF A ++PMDGFHL L
Sbjct: 156 QILGRGGLPNAFTIS---------NDVEPDEESSF---------AQIVPMDGFHLSRQCL 197
Query: 168 DAMEDPKEAHARRGAPWTFNPLLLLNCLKNLRNQGS------------------------ 203
+ ++P+EAH RRG+P TF+ K L +
Sbjct: 198 SSFQNPQEAHKRRGSPPTFDSNNFAQLCKTLAQTCTIKPGSCDAKSCFEFMAKTYDPHFP 257
Query: 204 -VYAPSFDHGVGDPVEDDILVGLQHKVVIVDGNYLFLDGGVWKDVSSMF 251
+ P FDH + DP D + ++VI++G YL D W+ V +
Sbjct: 258 CIKIPGFDHSLKDPTPDQFCLNGHTRIVILEGLYLLYDKENWQRVHEIL 306
Score = 36.2 bits (82), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 7/72 (9%)
Query: 88 DALAQRLLPTSALASNVNVKHIVGLAGPPGAGKSTLAAEVVRRINKIWP-------QKAS 140
DALA + + N + + + GPPG+GKST+A ++ R+IN + QK++
Sbjct: 40 DALANEAIGLLDQCKDDNYRVCILIVGPPGSGKSTVAQDLSRQINHRFDEYRLQGNQKSA 99
Query: 141 SFDSQVKPPDVA 152
++ + DVA
Sbjct: 100 HGGTRSRASDVA 111
>sp|Q750K6|YFH7_ASHGO ATP-dependent kinase YFH7 OS=Ashbya gossypii (strain ATCC 10895 /
CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=YFH7 PE=3 SV=1
Length = 334
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 56/124 (45%), Gaps = 27/124 (21%)
Query: 150 DVATVLPMDGFHLYLSQLDAMEDPKEAHARRGAPWTFNPLLLLNCLKNL----------R 199
++A V+PMDGFHL + LD D AH RRGAPWTF+ L K L R
Sbjct: 139 NIAEVVPMDGFHLSRAHLDHFADAAAAHKRRGAPWTFDSNNYLQLCKLLAATCKWKPAKR 198
Query: 200 NQGS---------------VYAPSFDHGVGDPVEDD-ILVGLQHKVVIVDGNYLFLDGGV 243
+G + P FDH DPV D +L G +V+I DG YL D
Sbjct: 199 PKGETLMETICDTFAQCPVISYPGFDHAAKDPVRDQHVLTGFT-RVLIFDGLYLLYDQEN 257
Query: 244 WKDV 247
W +
Sbjct: 258 WAHI 261
>sp|A7TQF3|YFH7_VANPO ATP-dependent kinase YFH7 OS=Vanderwaltozyma polyspora (strain ATCC
22028 / DSM 70294) GN=YFH7 PE=3 SV=1
Length = 359
Score = 61.6 bits (148), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 55/131 (41%), Gaps = 33/131 (25%)
Query: 150 DVATVLPMDGFHLYLSQLDAMEDPKEAHARRGAPWTFNPLLLLNCLKNL----------- 198
++A ++PMDGFHL LD +DP AH RRG+P TF+ L K L
Sbjct: 156 NIAQIIPMDGFHLTRKCLDNFKDPVNAHRRRGSPSTFDSNNFLQLCKLLAETSNTKIPLS 215
Query: 199 RNQGS----------------------VYAPSFDHGVGDPVEDDILVGLQHKVVIVDGNY 236
R Q S +Y P FDH + DP + + +++I +G Y
Sbjct: 216 RFQNSDNDDVDAVWEKLAKTFTSDVQDIYIPGFDHSLKDPTSNQYCINGFTRIMIFEGLY 275
Query: 237 LFLDGGVWKDV 247
L D W +
Sbjct: 276 LLYDQENWSKI 286
Score = 38.9 bits (89), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%)
Query: 88 DALAQRLLPTSALASNVNVKHIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVK 147
D L L A + N + + + GPPG+GKST+A E+ R+N ++ + ++
Sbjct: 5 DGLVSDSLKLLADRVDKNYRISLVIVGPPGSGKSTIANELCERLNSMFHEYLKEHGGNIE 64
Query: 148 PPDVATVLPMD 158
V+ LP+D
Sbjct: 65 ISGVSEPLPVD 75
>sp|Q6CNA8|YFH7_KLULA ATP-dependent kinase YFH7 OS=Kluyveromyces lactis (strain ATCC 8585
/ CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)
GN=YFH7 PE=3 SV=1
Length = 353
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 45/105 (42%), Gaps = 34/105 (32%)
Query: 149 PDVATVLPMDGFHLYLSQLDAMEDPKEAHARRGAPWTFNPLLLLNCLK------------ 196
PD+A ++PMDGFHL LD +DP AH RRG+P+TF+ L K
Sbjct: 143 PDIAQIVPMDGFHLSRKHLDHFKDPTVAHLRRGSPFTFDSNNFLQLCKVLSKTCSLDPNY 202
Query: 197 --------NLRNQGSVYA--------------PSFDHGVGDPVED 219
N N S++ P FDH + DPV D
Sbjct: 203 HSTGPETVNEDNTNSLFDNVTNSFIDLPEISFPGFDHAIKDPVAD 247
Score = 40.4 bits (93), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 87 YDALAQRLLPTSALASNVNVKHIVGLAGPPGAGKSTLAAEVVRRINKIW 135
YDAL + L N N + +G+ GPPG+GKST+A ++ +IN +
Sbjct: 4 YDALVDQALQLLEQNINKNYRVCIGIIGPPGSGKSTVAEKLKEKINSRY 52
>sp|Q6FUM2|YFH7_CANGA ATP-dependent kinase YFH7 OS=Candida glabrata (strain ATCC 2001 /
CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=YFH7 PE=3
SV=1
Length = 345
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 52/128 (40%), Gaps = 28/128 (21%)
Query: 151 VATVLPMDGFHLYLSQLDAMEDPKEAHARRGAPWTFNPLLLLNCLKNLRNQG-------- 202
+A VLPMDGFHL LD DP+ AH RRG+ TF+ L + +
Sbjct: 148 IAEVLPMDGFHLSRECLDHFSDPQWAHLRRGSSLTFDSNNFLKLCEIMAKTSRIFPSIGY 207
Query: 203 --------------------SVYAPSFDHGVGDPVEDDILVGLQHKVVIVDGNYLFLDGG 242
SV P FDH + DP + + ++VI +G YL +
Sbjct: 208 DGDDFTAFDAISSSFDCSVPSVEVPGFDHSLKDPQPSQHTISFKSRIVIFEGLYLLYNKE 267
Query: 243 VWKDVSSM 250
W + ++
Sbjct: 268 NWSKIYNI 275
>sp|A1SF33|COAA_NOCSJ Pantothenate kinase OS=Nocardioides sp. (strain BAA-499 / JS614)
GN=coaA PE=3 SV=1
Length = 329
Score = 48.1 bits (113), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 81/170 (47%), Gaps = 27/170 (15%)
Query: 109 IVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFHLYLSQLD 168
++GLAG GKST A V++ + WPQ P+VA V DGF ++L+
Sbjct: 102 VIGLAGSVAVGKST-TARVLQEMLAHWPQH----------PNVALVT-TDGFLYPNAELE 149
Query: 169 AMEDPKEAHARRGAPWTFNPLLLLNCLKNLRN-QGSVYAPSFDHGVGDPVEDDILVGLQH 227
+ R+G P +++ LL + ++++ + V AP++ H V D V D+ +V +
Sbjct: 150 R----RGLLERKGFPESYDRRALLKFVVDIKSGKDEVLAPTYSHLVYDVVPDEKVVIRRP 205
Query: 228 KVVIVDGNYLFL------DGGVWKDVSSMFDEKCYA----TSFKETYFNR 267
+VIV+G + DG +S FD Y ++ ++ Y +R
Sbjct: 206 DIVIVEGLNVLQPARVRDDGRTGLTLSDFFDFSVYVDAKTSTIRDWYVSR 255
>sp|B2G996|COAA_LACRJ Pantothenate kinase OS=Lactobacillus reuteri (strain JCM 1112)
GN=coaA PE=3 SV=1
Length = 307
Score = 44.7 bits (104), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 72/160 (45%), Gaps = 18/160 (11%)
Query: 102 SNVNVKHIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFH 161
S + + +I+G+AG GKST+A + +NK+ P K ++ DGF
Sbjct: 78 STMRIPYIIGIAGSVAVGKSTIARLISILLNKMLPDKR------------VELMTTDGFL 125
Query: 162 LYLSQLDAMEDPKEAHARRGAPWTFNPLLLLNCLKNLR-NQGSVYAPSFDHGVGDPVEDD 220
++L + R+G P +++ LL L +++ + V AP++ H V D D
Sbjct: 126 YPNAELKR----RGIMDRKGFPESYDMERLLKFLNDVKAGEPVVKAPTYSHQVYDVQLDK 181
Query: 221 ILVGLQHKVVIVDG-NYLFLDGGVWKDVSSMFDEKCYATS 259
LV ++IV+G N L L VS FD Y +
Sbjct: 182 PLVIDSPDILIVEGINTLQLPSNQQLYVSDYFDWSLYVDA 221
>sp|A5VLY5|COAA_LACRD Pantothenate kinase OS=Lactobacillus reuteri (strain DSM 20016)
GN=coaA PE=3 SV=1
Length = 307
Score = 44.7 bits (104), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 72/160 (45%), Gaps = 18/160 (11%)
Query: 102 SNVNVKHIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFH 161
S + + +I+G+AG GKST+A + +NK+ P K ++ DGF
Sbjct: 78 STMRIPYIIGIAGSVAVGKSTIARLISILLNKMLPDKR------------VELMTTDGFL 125
Query: 162 LYLSQLDAMEDPKEAHARRGAPWTFNPLLLLNCLKNLR-NQGSVYAPSFDHGVGDPVEDD 220
++L + R+G P +++ LL L +++ + V AP++ H V D D
Sbjct: 126 YPNAELKR----RGIMDRKGFPESYDMERLLKFLNDVKAGEPVVKAPTYSHQVYDVQLDK 181
Query: 221 ILVGLQHKVVIVDG-NYLFLDGGVWKDVSSMFDEKCYATS 259
LV ++IV+G N L L VS FD Y +
Sbjct: 182 PLVIDSPDILIVEGINTLQLPSNQQLYVSDYFDWSLYVDA 221
>sp|Q1WRY7|COAA_LACS1 Pantothenate kinase OS=Lactobacillus salivarius (strain UCC118)
GN=coaA PE=3 SV=1
Length = 306
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 74/171 (43%), Gaps = 29/171 (16%)
Query: 106 VKHIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFHLY-- 163
V I+G+AG GKST A + +++++P K ++ DGF LY
Sbjct: 82 VPFILGIAGSVAVGKSTTARLLQSLLSEVYPDKK------------VQLITTDGF-LYPN 128
Query: 164 --LSQLDAMEDPKEAHARRGAPWTFNPLLLLNCLKNLRNQGSVYAPSFDHGVGDPVEDDI 221
L + + ME R+G P +++ LL + +++N AP + H V D V+
Sbjct: 129 QELKRRNLME-------RKGFPESYDMRRLLRFVNDVKNNLPAKAPVYSHKVYDIVKGQY 181
Query: 222 LVGLQHKVVIVDG-NYLFLDGGVWKDVSSMFDEKCYATS----FKETYFNR 267
+ ++IV+G N L L VS FD Y + +E Y R
Sbjct: 182 EIVESPDILIVEGINVLQLPTNQQIYVSDFFDFSIYVDAEESLIEEWYLER 232
>sp|A1R8P8|COAA_ARTAT Pantothenate kinase OS=Arthrobacter aurescens (strain TC1) GN=coaA
PE=3 SV=1
Length = 323
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 82/192 (42%), Gaps = 49/192 (25%)
Query: 109 IVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFHLYLSQLD 168
++G+AG GKST+ A V+R + + WP P+V ++ DGF L++L
Sbjct: 96 VIGVAGSVAVGKSTI-ARVLREMLRRWPGT----------PNVE-LITTDGFLYPLAEL- 142
Query: 169 AMEDPKEAH--ARRGAPWTFNPLLLLNCLKNLRNQG-SVYAPSFDHGVGDPVEDDILVGL 225
K H R+G P +++ LL + ++ V AP + H D V +V
Sbjct: 143 -----KRRHLLERKGFPESYDRRGLLRFVSEVKGGAEEVRAPWYSHVTYDIVPGKEVVVR 197
Query: 226 QHKVVIVDG-NYL-----------------FLDGGVWKDVSSMFDEKCYATSFK------ 261
+ V+IV+G N L F D ++ D + + E+ Y F+
Sbjct: 198 RPDVLIVEGLNVLAPARPRMDGKQGLAVSDFFDFSIYVDAKTSYIEEWYVDRFRKLRTTA 257
Query: 262 ----ETYFNREA 269
E+YF+R A
Sbjct: 258 FAQPESYFHRYA 269
>sp|B2GEA0|COAA_LACF3 Pantothenate kinase OS=Lactobacillus fermentum (strain NBRC 3956 /
LMG 18251) GN=coaA PE=3 SV=1
Length = 307
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 75/173 (43%), Gaps = 30/173 (17%)
Query: 102 SNVNVKHIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFH 161
S+ + +I+G+AG GKST A + + ++ P + ++ DGF
Sbjct: 78 SSRRIPYIIGIAGSVAVGKSTTARLLQILLKRLMPDRR------------IEMITTDGF- 124
Query: 162 LYLSQLDAMEDPKEAHARRGAPWTFNPLLLLNCLKNLR-NQGSVYAPSFDHGVGDPVEDD 220
LY + A + AR+G P +++ LL + ++ + V AP++ H V D +ED
Sbjct: 125 LYPN---AELKRRGIMARKGFPESYDMDRLLTFMNDVNAGEDQVTAPTYSHSVYDVMEDH 181
Query: 221 ILVGLQHKVVIVDG-NYL------------FLDGGVWKDVSSMFDEKCYATSF 260
+ ++IV+G N L F D V+ D + EK Y F
Sbjct: 182 PQTIYKPDILIVEGINVLQLPTTQRLFVSDFFDFSVYVDADASLVEKWYLERF 234
>sp|O86779|COAA_STRCO Pantothenate kinase OS=Streptomyces coelicolor (strain ATCC BAA-471
/ A3(2) / M145) GN=coaA PE=3 SV=1
Length = 329
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 76/170 (44%), Gaps = 27/170 (15%)
Query: 109 IVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFHLYLSQLD 168
++G+AG GKST+A +++ + WP+ P V V DGF L +L+
Sbjct: 102 VIGVAGSVAVGKSTVA-RLLQALLSRWPEH----------PRVELVT-TDGFLLPTRELE 149
Query: 169 AMEDPKEAHARRGAPWTFNPLLLLNCLKNLR-NQGSVYAPSFDHGVGDPVEDDILVGLQH 227
A + +R+G P +++ L + +++ + V AP + H + D V D LV +
Sbjct: 150 A----RGLMSRKGFPESYDRRALTRFVADIKAGKAEVTAPVYSHLIYDIVPDQRLVVRRP 205
Query: 228 KVVIVDGNYLFL------DGGVWKDVSSMFDEKCYATSFKET----YFNR 267
++IV+G + DG ++ FD Y + E Y NR
Sbjct: 206 DILIVEGLNVLQPALPGKDGRTRVGLADYFDFSVYVDARTEDIERWYLNR 255
>sp|P54556|COAA_BACSU Pantothenate kinase OS=Bacillus subtilis (strain 168) GN=coaA PE=3
SV=2
Length = 319
Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 67/141 (47%), Gaps = 25/141 (17%)
Query: 103 NVNVKH--------IVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATV 154
NV +KH I+G+AG GKST A +++++ P + P V ++
Sbjct: 77 NVFLKHPHSAKIPFIIGIAGSVAVGKST-TARILQKLLSRLPDR----------PKV-SL 124
Query: 155 LPMDGFHLYLSQLDAMEDPKEAHARRGAPWTFNPLLLLNCLKNLRN-QGSVYAPSFDHGV 213
+ DGF ++L K +R+G P +++ LL L +L++ + SV AP + H
Sbjct: 125 ITTDGFLFPTAELKK----KNMMSRKGFPESYDVKALLEFLNDLKSGKDSVKAPVYSHLT 180
Query: 214 GDPVEDDILVGLQHKVVIVDG 234
D E V Q +VI++G
Sbjct: 181 YDREEGVFEVVEQADIVIIEG 201
>sp|B3W953|COAA_LACCB Pantothenate kinase OS=Lactobacillus casei (strain BL23) GN=coaA
PE=3 SV=1
Length = 308
Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 76/163 (46%), Gaps = 18/163 (11%)
Query: 99 ALASNVNVKHIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMD 158
+ N + I+G+AG GKST A + +++ +P+K + D
Sbjct: 76 GMQRNPHTPFIIGIAGSVAVGKSTTARLLQLLLSRAYPEKR------------VQQMTTD 123
Query: 159 GFHLYLSQLDAMEDPKEAHARRGAPWTFNPLLLLNCLKNLRN-QGSVYAPSFDHGVGDPV 217
GF LY +A + + R+G P +++ LL++ + N++N G++ AP + H + D V
Sbjct: 124 GF-LY---PNAELERRGILDRKGFPESYDMELLIHFMNNVKNASGALRAPKYSHQIYDIV 179
Query: 218 EDDILVGLQHKVVIVDG-NYLFLDGGVWKDVSSMFDEKCYATS 259
+ + + ++IV+G N L L VS FD Y +
Sbjct: 180 PGEYELIDRPDILIVEGINVLQLPSKQPIYVSDYFDFSIYVDA 222
>sp|Q036Y4|COAA_LACC3 Pantothenate kinase OS=Lactobacillus casei (strain ATCC 334)
GN=coaA PE=3 SV=1
Length = 308
Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 76/163 (46%), Gaps = 18/163 (11%)
Query: 99 ALASNVNVKHIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMD 158
+ N + I+G+AG GKST A + +++ +P+K + D
Sbjct: 76 GMQRNPHTPFIIGIAGSVAVGKSTTARLLQLLLSRAYPEKR------------VQQMTTD 123
Query: 159 GFHLYLSQLDAMEDPKEAHARRGAPWTFNPLLLLNCLKNLRN-QGSVYAPSFDHGVGDPV 217
GF LY +A + + R+G P +++ LL++ + N++N G++ AP + H + D V
Sbjct: 124 GF-LY---PNAELERRGILDRKGFPESYDMELLIHFMNNVKNASGALRAPKYSHQIYDIV 179
Query: 218 EDDILVGLQHKVVIVDG-NYLFLDGGVWKDVSSMFDEKCYATS 259
+ + + ++IV+G N L L VS FD Y +
Sbjct: 180 PGEYELIDRPDILIVEGINVLQLPSKQPIYVSDYFDFSIYVDA 222
>sp|Q38ZE2|COAA_LACSS Pantothenate kinase OS=Lactobacillus sakei subsp. sakei (strain
23K) GN=coaA PE=3 SV=1
Length = 309
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 69/153 (45%), Gaps = 22/153 (14%)
Query: 109 IVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFHLYLSQLD 168
I+G+AG GKST A + +++++P K ++ DGF S+L
Sbjct: 87 IIGIAGSVAVGKSTTARLLQLLLSRVYPDKT------------VQMITTDGFLYSTSELK 134
Query: 169 AMEDPKEAHARRGAPWTFN-PLLL--LNCLKNLRNQGSVYAPSFDHGVGDPVEDDILVGL 225
K ++G P +++ P L+ LN +KN N V AP + H + D + D+ +
Sbjct: 135 Q----KGILDKKGFPESYDMPQLISFLNAVKN--NVAPVKAPKYSHQIYDIIPDEFDIID 188
Query: 226 QHKVVIVDG-NYLFLDGGVWKDVSSMFDEKCYA 257
++IV+G N L L VS FD Y
Sbjct: 189 DPDILIVEGINVLQLPTTEQIYVSDFFDFSVYV 221
>sp|Q9VC99|UCK_DROME Probable uridine-cytidine kinase OS=Drosophila melanogaster
GN=CG6364 PE=3 SV=1
Length = 260
Score = 40.8 bits (94), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 85/196 (43%), Gaps = 28/196 (14%)
Query: 83 MDEVYDALAQRLLPTSALASNVNVK--HIVGLAGPPGAGKSTLAAEVVRRINKIWPQKAS 140
M ++ +A RL A+N VK ++G+AG +GKST+ +++ ++ + +
Sbjct: 1 MQDLRNADTLRLPNGDGAAANDEVKSPFLIGVAGGTASGKSTVCKKIMEQLGQ------A 54
Query: 141 SFDSQVKPPDVATVLPMDGFHLYLSQLDAMEDPKE-AHARRG-----APWTFNPLLLLNC 194
D + + D F+ L+ P E A A++G P FN L+ +
Sbjct: 55 EMDHTQRQ---VVSISQDSFYRELT-------PAEKAKAQKGLFNFDHPDAFNEELMYST 104
Query: 195 LKNLRNQGSVYAPSFDHGVGDPVEDDILVGLQHKVVIVDGNYLFLDGGVWKDVSSMFDEK 254
L+N+ V PS+D+ +++LV VV+ +G +F + + +F K
Sbjct: 105 LQNILKGHKVEIPSYDYRTNSLDFENVLVIYPADVVLFEGILVFY----FPKIRELFHMK 160
Query: 255 CYATSFKETYFNREAP 270
+ + +T R P
Sbjct: 161 LFVDTDSDTRLARRVP 176
>sp|A9KD67|COAA_COXBN Pantothenate kinase OS=Coxiella burnetii (strain Dugway 5J108-111)
GN=coaA PE=3 SV=1
Length = 318
Score = 40.4 bits (93), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 85/194 (43%), Gaps = 33/194 (17%)
Query: 72 QREIPVVEARCMDEVYDALAQRLLPTSALASNV--------------NVKHIVGLAGPPG 117
Q +I +V + + E+Y L+ RLL A V +I+G+AG
Sbjct: 41 QGQIEIVSLKEVTEIYLPLS-RLLSFYVTARQTLQQATYQFLGKPEPKVPYIIGIAGSVA 99
Query: 118 AGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFHLYLSQLDAMEDPKEAH 177
GKST + V++ + WP P+V V+ DGF LY +A + +
Sbjct: 100 VGKST-TSRVLKALLSRWPDH----------PNVE-VITTDGF-LY---SNAKLEKQGLM 143
Query: 178 ARRGAPWTFNPLLLLNCLKNLRN-QGSVYAPSFDHGVGDPVEDDILVGLQHKVVIVDGNY 236
R+G P +++ LL L +++ Q +V P + H D V + Q +VI++G
Sbjct: 144 KRKGFPESYDMPSLLRVLNAIKSGQRNVRIPVYSHHYYDIVRGQYEIVDQPDIVILEGLN 203
Query: 237 LFLDGGVWKDVSSM 250
+ L GV K + +
Sbjct: 204 I-LQTGVRKTLQQL 216
>sp|Q83EV9|COAA_COXBU Pantothenate kinase OS=Coxiella burnetii (strain RSA 493 / Nine
Mile phase I) GN=coaA PE=1 SV=1
Length = 318
Score = 40.4 bits (93), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 85/194 (43%), Gaps = 33/194 (17%)
Query: 72 QREIPVVEARCMDEVYDALAQRLLPTSALASNV--------------NVKHIVGLAGPPG 117
Q +I +V + + E+Y L+ RLL A V +I+G+AG
Sbjct: 41 QGQIEIVSLKEVTEIYLPLS-RLLSFYVTARQTLQQATYQFLGKPEPKVPYIIGIAGSVA 99
Query: 118 AGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFHLYLSQLDAMEDPKEAH 177
GKST + V++ + WP P+V V+ DGF LY +A + +
Sbjct: 100 VGKST-TSRVLKALLSRWPDH----------PNVE-VITTDGF-LY---SNAKLEKQGLM 143
Query: 178 ARRGAPWTFNPLLLLNCLKNLRN-QGSVYAPSFDHGVGDPVEDDILVGLQHKVVIVDGNY 236
R+G P +++ LL L +++ Q +V P + H D V + Q +VI++G
Sbjct: 144 KRKGFPESYDMPSLLRVLNAIKSGQRNVRIPVYSHHYYDIVRGQYEIVDQPDIVILEGLN 203
Query: 237 LFLDGGVWKDVSSM 250
+ L GV K + +
Sbjct: 204 I-LQTGVRKTLQQL 216
>sp|A9NAJ3|COAA_COXBR Pantothenate kinase OS=Coxiella burnetii (strain RSA 331 /
Henzerling II) GN=coaA PE=3 SV=1
Length = 318
Score = 40.4 bits (93), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 85/194 (43%), Gaps = 33/194 (17%)
Query: 72 QREIPVVEARCMDEVYDALAQRLLPTSALASNV--------------NVKHIVGLAGPPG 117
Q +I +V + + E+Y L+ RLL A V +I+G+AG
Sbjct: 41 QGQIEIVSLKEVTEIYLPLS-RLLSFYVTARQTLQQATYQFLGKPEPKVPYIIGIAGSVA 99
Query: 118 AGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFHLYLSQLDAMEDPKEAH 177
GKST + V++ + WP P+V V+ DGF LY +A + +
Sbjct: 100 VGKST-TSRVLKALLSRWPDH----------PNVE-VITTDGF-LY---SNAKLEKQGLM 143
Query: 178 ARRGAPWTFNPLLLLNCLKNLRN-QGSVYAPSFDHGVGDPVEDDILVGLQHKVVIVDGNY 236
R+G P +++ LL L +++ Q +V P + H D V + Q +VI++G
Sbjct: 144 KRKGFPESYDMPSLLRVLNAIKSGQRNVRIPVYSHHYYDIVRGQYEIVDQPDIVILEGLN 203
Query: 237 LFLDGGVWKDVSSM 250
+ L GV K + +
Sbjct: 204 I-LQTGVRKTLQQL 216
>sp|B6J2J7|COAA_COXB2 Pantothenate kinase OS=Coxiella burnetii (strain CbuG_Q212) GN=coaA
PE=3 SV=1
Length = 318
Score = 40.4 bits (93), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 85/194 (43%), Gaps = 33/194 (17%)
Query: 72 QREIPVVEARCMDEVYDALAQRLLPTSALASNV--------------NVKHIVGLAGPPG 117
Q +I +V + + E+Y L+ RLL A V +I+G+AG
Sbjct: 41 QGQIEIVSLKEVTEIYLPLS-RLLSFYVTARQTLQQATYQFLGKPEPKVPYIIGIAGSVA 99
Query: 118 AGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFHLYLSQLDAMEDPKEAH 177
GKST + V++ + WP P+V V+ DGF LY +A + +
Sbjct: 100 VGKST-TSRVLKALLSRWPDH----------PNVE-VITTDGF-LY---SNAKLEKQGLM 143
Query: 178 ARRGAPWTFNPLLLLNCLKNLRN-QGSVYAPSFDHGVGDPVEDDILVGLQHKVVIVDGNY 236
R+G P +++ LL L +++ Q +V P + H D V + Q +VI++G
Sbjct: 144 KRKGFPESYDMPSLLRVLNAIKSGQRNVRIPVYSHHYYDIVRGQYEIVDQPDIVILEGLN 203
Query: 237 LFLDGGVWKDVSSM 250
+ L GV K + +
Sbjct: 204 I-LQTGVRKTLQQL 216
>sp|B6J596|COAA_COXB1 Pantothenate kinase OS=Coxiella burnetii (strain CbuK_Q154) GN=coaA
PE=3 SV=1
Length = 318
Score = 40.4 bits (93), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 85/194 (43%), Gaps = 33/194 (17%)
Query: 72 QREIPVVEARCMDEVYDALAQRLLPTSALASNV--------------NVKHIVGLAGPPG 117
Q +I +V + + E+Y L+ RLL A V +I+G+AG
Sbjct: 41 QGQIEIVSLKEVTEIYLPLS-RLLSFYVTARQTLQQATYQFLGKPEPKVPYIIGIAGSVA 99
Query: 118 AGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFHLYLSQLDAMEDPKEAH 177
GKST + V++ + WP P+V V+ DGF LY +A + +
Sbjct: 100 VGKST-TSRVLKALLSRWPDH----------PNVE-VITTDGF-LY---SNAKLEKQGLM 143
Query: 178 ARRGAPWTFNPLLLLNCLKNLRN-QGSVYAPSFDHGVGDPVEDDILVGLQHKVVIVDGNY 236
R+G P +++ LL L +++ Q +V P + H D V + Q +VI++G
Sbjct: 144 KRKGFPESYDMPSLLRVLNAIKSGQRNVRIPVYSHHYYDIVRGQYEIVDQPDIVILEGLN 203
Query: 237 LFLDGGVWKDVSSM 250
+ L GV K + +
Sbjct: 204 I-LQTGVRKTLQQL 216
>sp|Q4JU68|COAA_CORJK Pantothenate kinase OS=Corynebacterium jeikeium (strain K411)
GN=coaA PE=3 SV=1
Length = 308
Score = 40.0 bits (92), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 73/159 (45%), Gaps = 18/159 (11%)
Query: 105 NVKHIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFHLYL 164
+ +I+G+ G GKST A R+ ++ Q+ + P V V DGF L
Sbjct: 84 QIPYIIGVCGSVAVGKSTTA-----RVLQVLLQRWET------NPRVDLV-TTDGFLLPT 131
Query: 165 SQLDAMEDPKEAHARRGAPWTFNPLLLLNCLKNLRN-QGSVYAPSFDHGVGDPVEDDILV 223
++L+ ++ R+G P +++ LL+ + +++ V AP + H D + D +
Sbjct: 132 AELER----RKLMHRKGFPESYDQAELLSFITKVKSGTQKVQAPVYSHEAYDRIPDQTIT 187
Query: 224 GLQHKVVIVDGNYLFLDGGVWKDVSSMFDEKCYATSFKE 262
+ ++IV+G + G VS +FD Y + +E
Sbjct: 188 VDRPDILIVEGLNVLQTGPTLM-VSDLFDFSVYVDARRE 225
>sp|Q839J7|COAA_ENTFA Pantothenate kinase OS=Enterococcus faecalis (strain ATCC 700802 /
V583) GN=coaA PE=3 SV=1
Length = 307
Score = 40.0 bits (92), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 76/166 (45%), Gaps = 30/166 (18%)
Query: 109 IVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFHLYLSQLD 168
I+G+AG GKST A + R + + + ++ ++ DGF LY +++
Sbjct: 85 IIGIAGSVAVGKSTTARLLQRILARTFKRRN------------VQLITTDGF-LYPNKV- 130
Query: 169 AMEDPKEAHARRGAPWTFNPLLLLNCLKNLRN-QGSVYAPSFDHGVGDPVEDDILVGLQH 227
+E+ + R+G P +++ L+N L +++ + + AP + H V D +E + + Q
Sbjct: 131 -LEE-QGIMDRKGFPESYDMEKLINFLNEVKSGKDEIKAPVYSHSVYDVIEGEYELIQQP 188
Query: 228 KVVIVDG-NYL------------FLDGGVWKDVSSMFDEKCYATSF 260
++IV+G N L F D ++ D EK Y F
Sbjct: 189 DILIVEGINTLQLPANQQIYVSDFFDFSIFVDADPALIEKWYLERF 234
>sp|B9JXX1|COAA_AGRVS Pantothenate kinase OS=Agrobacterium vitis (strain S4 / ATCC
BAA-846) GN=coaA PE=3 SV=1
Length = 330
Score = 40.0 bits (92), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 72/165 (43%), Gaps = 24/165 (14%)
Query: 100 LASNVN-VKHIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMD 158
L++NV I+G+AG GKST A V++ + WP P V V D
Sbjct: 93 LSTNVTKTPFIIGIAGSVAVGKST-TARVLKELLARWPSS----------PKVDLV-TTD 140
Query: 159 GFHLYLSQLDAMEDPKEAHARRGAPWTFNPLLLLNCLKNLR-NQGSVYAPSFDHGVGDPV 217
GF LY S + D K R+G P +++ LL L ++ Q +V AP + H D +
Sbjct: 141 GF-LY-SNATLVRDNK--LNRKGFPESYDTAALLRFLSAIKAGQQNVKAPRYSHLTYDVL 196
Query: 218 EDDILVGLQHKVVIVDGNYLF------LDGGVWKDVSSMFDEKCY 256
D + + ++I +G + DG + VS FD Y
Sbjct: 197 PDQHTIIDRPDILIFEGINVLQSRDLPRDGKIVPMVSDFFDFSIY 241
>sp|A1T0P0|COAA_PSYIN Pantothenate kinase OS=Psychromonas ingrahamii (strain 37) GN=coaA
PE=3 SV=1
Length = 322
Score = 40.0 bits (92), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 78/179 (43%), Gaps = 35/179 (19%)
Query: 101 ASNVNVKHIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGF 160
+ N NV +I+G+AG GKST A +++ I WP+ P VA V DGF
Sbjct: 88 SKNENVPYIIGIAGSVAVGKST-TARILQAILSHWPEH----------PRVALV-TTDGF 135
Query: 161 HLYLSQLDAMEDPKEAHARRGAPWTFNPLLLLNCLKNLRN-QGSVYAPSFDHGVGDPVED 219
+L A + ++G P +F+ L++ + +++ + + AP + H D + D
Sbjct: 136 LRPNRELVA----RNIMHKKGFPESFDTKALIDFVAAIKSGKELISAPIYSHLTYDILPD 191
Query: 220 DILVGLQHKVVIVDG--------NY----------LFLDGGVWKDVSSMFDEKCYATSF 260
L + +VI++G NY F+D ++ D + +K Y F
Sbjct: 192 KKLHLEKPDIVILEGLNVLQSASNYPDHPQRTFVSDFVDFSIFVDAETQLLKKWYVQRF 250
>sp|Q2NWS4|COAA_SODGM Pantothenate kinase OS=Sodalis glossinidius (strain morsitans)
GN=coaA PE=3 SV=1
Length = 316
Score = 39.7 bits (91), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 76/176 (43%), Gaps = 33/176 (18%)
Query: 106 VKHIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGF---HL 162
+ +I+G+AG GKST A V++ + WP+ + ++ DGF +
Sbjct: 87 IPYIIGIAGSVAVGKST-TARVLQALLSRWPEHRT-----------VELVTTDGFLHPNS 134
Query: 163 YLSQLDAMEDPKEAHARRGAPWTFNPLLLLNCLKNLRNQG-SVYAPSFDHGVGDPVEDDI 221
L Q D M+ ++G P +++ L+N + +++ V AP + H + D V D+
Sbjct: 135 VLKQRDLMK-------KKGFPESYDIRSLVNFVSKVKSGTPRVTAPVYSHLIYDVVPDEQ 187
Query: 222 LVGLQHKVVIVDGNYLFLDGGVWKD------VSSMFDEKCYA----TSFKETYFNR 267
V Q ++I++G + G + VS D Y T + Y NR
Sbjct: 188 KVISQPDILILEGLNVLQSGSDYNHDPHHVFVSDFVDFSIYVDAPETLLQSWYINR 243
>sp|A8AX56|COAA_STRGC Pantothenate kinase OS=Streptococcus gordonii (strain Challis /
ATCC 35105 / CH1 / DL1 / V288) GN=coaA PE=3 SV=1
Length = 306
Score = 39.7 bits (91), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 70/156 (44%), Gaps = 33/156 (21%)
Query: 109 IVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFHLY----L 164
I+G++G GKST + R+ +I + +++V+ ++ DGF LY L
Sbjct: 86 IIGVSGSVAVGKSTTS-----RLLQILLSRTFE-NAKVE------LVTTDGF-LYPNSVL 132
Query: 165 SQLDAMEDPKEAHARRGAPWTFNPLLLLNCLKNLRNQGSVYAPSFDHGVGDPVEDDILVG 224
+ D + R+G P ++N LLLN L +L+N + P + H + D V D
Sbjct: 133 QEHDLLN-------RKGFPESYNMELLLNFLDHLKNGQNYQVPVYSHEIYDIVPDQTQTI 185
Query: 225 LQHKVVIVDGNYLFLDGGVWKDVSSMFDEKCYATSF 260
VIV+G +F + +E+ Y T F
Sbjct: 186 QVADFVIVEGINVFQNPQ---------NERLYITDF 212
>sp|Q1D9X8|COAA_MYXXD Pantothenate kinase OS=Myxococcus xanthus (strain DK 1622) GN=coaA
PE=3 SV=1
Length = 317
Score = 39.7 bits (91), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 67/153 (43%), Gaps = 26/153 (16%)
Query: 89 ALAQRLLPTSAL---ASNVNVKHIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQ 145
A AQRL S V +I+ +AG GKST A +++ + K WP
Sbjct: 67 AAAQRLWAEQQAFLGGSTQKVPYIIAIAGSVAVGKST-TARILQALLKRWPDH------- 118
Query: 146 VKPPDVATVLPMDGFHL---YLSQLDAMEDPKEAHARRGAPWTFNPLLLLNCLKNLR-NQ 201
P V V DGF L++ D M+ R+G P +++ L+ L L+ +
Sbjct: 119 ---PRVELV-TTDGFLFPNDVLTERDLMK-------RKGFPESYDRRALVRFLAELKAGR 167
Query: 202 GSVYAPSFDHGVGDPVEDDILVGLQHKVVIVDG 234
V AP + H V D V + V Q ++I++G
Sbjct: 168 AEVAAPVYSHLVYDVVPGEAQVVRQPDILILEG 200
>sp|C0Z7P4|COAA_BREBN Pantothenate kinase OS=Brevibacillus brevis (strain 47 / JCM 6285 /
NBRC 100599) GN=coaA PE=3 SV=1
Length = 320
Score = 39.7 bits (91), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 64/130 (49%), Gaps = 17/130 (13%)
Query: 106 VKHIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFHLYLS 165
V I+G+AG GKST A +++ + WP P V V DGF LY +
Sbjct: 88 VPFIIGIAGSVAVGKST-TARILQTLLSRWPNH----------PKVDLV-TTDGF-LYPN 134
Query: 166 QLDAMEDPKEAHARRGAPWTFNPLLLLNCLKNLRN-QGSVYAPSFDHGVGDPVEDDILVG 224
++ +ED + R+G P +++ +N L ++++ V AP + H V D V D+
Sbjct: 135 KV--LED-RGIMKRKGFPESYDLRRFINFLSDVKSGLPEVKAPVYSHLVYDIVPDEWQTV 191
Query: 225 LQHKVVIVDG 234
Q ++IV+G
Sbjct: 192 RQPDILIVEG 201
>sp|A3Q967|COAA_SHELP Pantothenate kinase OS=Shewanella loihica (strain ATCC BAA-1088 /
PV-4) GN=coaA PE=3 SV=1
Length = 316
Score = 39.3 bits (90), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 72/158 (45%), Gaps = 19/158 (12%)
Query: 80 ARCMDEVYDALAQRLLPTSALASNVNVK--HIVGLAGPPGAGKSTLAAEVVRRINKIWPQ 137
+R ++ + A QR L + V K +I+ +AG GKST A +++ + + WP+
Sbjct: 59 SRLLNLIVGAKQQRGLVLNQFLGRVPPKRPYIISIAGSVAVGKST-TARILQALLRQWPE 117
Query: 138 KASSFDSQVKPPDVATVLPMDGFHLYLSQLDAMEDPKEAHARRGAPWTFNPLLLLNCLKN 197
P V V DGF LS+L + R+G P +++ LL+ +
Sbjct: 118 H----------PKVDLV-TTDGFLYPLSELKR----RGLLQRKGFPESYDMKLLVEFISK 162
Query: 198 LR-NQGSVYAPSFDHGVGDPVEDDILVGLQHKVVIVDG 234
++ + V+AP + H D V D Q ++I++G
Sbjct: 163 IKAGESLVHAPIYSHISYDRVADTQQAIEQPDILIIEG 200
>sp|P57967|COAA_PASMU Pantothenate kinase OS=Pasteurella multocida (strain Pm70) GN=coaA
PE=3 SV=1
Length = 316
Score = 39.3 bits (90), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 65/130 (50%), Gaps = 17/130 (13%)
Query: 106 VKHIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFHLYLS 165
V +I+ +AG GKST +A +++ + WP++ + D+ T DGF L
Sbjct: 91 VPYIISIAGSVAVGKST-SARILQSLLSQWPER--------RKVDLITT---DGF---LY 135
Query: 166 QLDAMEDPKEAHARRGAPWTFNPLLLLNCLKNLRN-QGSVYAPSFDHGVGDPVEDDILVG 224
L ++ H ++G P +++ L+ L ++++ + V AP + H + D V D V
Sbjct: 136 PLAKLQQDNLLH-KKGFPVSYDTARLVRFLADIKSGKPKVSAPVYSHLIYDIVPDQFDVV 194
Query: 225 LQHKVVIVDG 234
Q ++I++G
Sbjct: 195 DQPDILILEG 204
>sp|Q5M4T8|COAA_STRT2 Pantothenate kinase OS=Streptococcus thermophilus (strain ATCC
BAA-250 / LMG 18311) GN=coaA PE=3 SV=1
Length = 306
Score = 38.9 bits (89), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 23/133 (17%)
Query: 109 IVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFHLYLSQLD 168
I+G++G GKST + + + + +P+ D+ T DGF L+ +Q+
Sbjct: 86 IIGISGSVAVGKSTTSRLLQLLLQRTFPKAKV---------DMVTT---DGF-LFPNQVL 132
Query: 169 AMEDPKEAHARRGAPWTFNPLLLLNCLKNLRNQGSVYAPSFDHGVGDPVEDDILVGLQHK 228
K R+G P +++ LLLN L ++N G V P + H + DI+ GL K
Sbjct: 133 I---DKGILNRKGFPESYDMPLLLNFLDTVKNGGDVNIPVYSHEIY-----DIVPGLTQK 184
Query: 229 VVIVDGNYLFLDG 241
I N+L ++G
Sbjct: 185 --ISQPNFLIVEG 195
>sp|Q5M079|COAA_STRT1 Pantothenate kinase OS=Streptococcus thermophilus (strain CNRZ
1066) GN=coaA PE=3 SV=1
Length = 306
Score = 38.9 bits (89), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 23/133 (17%)
Query: 109 IVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFHLYLSQLD 168
I+G++G GKST + + + + +P+ D+ T DGF L+ +Q+
Sbjct: 86 IIGISGSVAVGKSTTSRLLQLLLQRTFPKAKV---------DMVTT---DGF-LFPNQVL 132
Query: 169 AMEDPKEAHARRGAPWTFNPLLLLNCLKNLRNQGSVYAPSFDHGVGDPVEDDILVGLQHK 228
K R+G P +++ LLLN L ++N G V P + H + DI+ GL K
Sbjct: 133 I---DKGILNRKGFPESYDMPLLLNFLDTVKNGGDVNIPVYSHEIY-----DIVPGLTQK 184
Query: 229 VVIVDGNYLFLDG 241
I N+L ++G
Sbjct: 185 --ISQPNFLIVEG 195
>sp|Q3SWF3|COAA_NITWN Pantothenate kinase OS=Nitrobacter winogradskyi (strain Nb-255 /
ATCC 25391) GN=coaA PE=3 SV=1
Length = 318
Score = 38.9 bits (89), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 80/181 (44%), Gaps = 26/181 (14%)
Query: 86 VYDALAQRLLPTSALASNVN---VKHIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSF 142
+Y A QRL ++ V +I+G+AG GKST A V++ + W +
Sbjct: 65 IYVAAMQRLFVAQRQFLGIHDRKVPYIIGVAGSVAVGKST-TARVLQALLARWSPR---- 119
Query: 143 DSQVKPPDVATVLPMDGFHLYLSQLDAMEDPKEAHARRGAPWTFNPLLLLNCLKNLR-NQ 201
P V V DGF L +A+ + + ++G P +++ +LL+ L +++ +
Sbjct: 120 ------PKVELV-TTDGFLL----PNAVLERRGLMQKKGFPESYDLPMLLSFLSDIKAGR 168
Query: 202 GSVYAPSFDHGVGDPVEDDILVGLQHKVVIVDGNYLFLDGGVWKD------VSSMFDEKC 255
V AP + H D V D + ++IV+G + G + +D VS FD
Sbjct: 169 APVRAPVYSHLTYDIVPDSWIEVSHPDILIVEGVNVLQTGPLPRDGRAIPVVSDFFDFSV 228
Query: 256 Y 256
Y
Sbjct: 229 Y 229
>sp|Q03L30|COAA_STRTD Pantothenate kinase OS=Streptococcus thermophilus (strain ATCC
BAA-491 / LMD-9) GN=coaA PE=3 SV=1
Length = 306
Score = 38.9 bits (89), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 23/133 (17%)
Query: 109 IVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFHLYLSQLD 168
I+G++G GKST + + + + +P+ D+ T DGF L+ +Q+
Sbjct: 86 IIGISGSVAVGKSTTSRLLQLLLQRTFPKAKV---------DMVTT---DGF-LFPNQVL 132
Query: 169 AMEDPKEAHARRGAPWTFNPLLLLNCLKNLRNQGSVYAPSFDHGVGDPVEDDILVGLQHK 228
K R+G P +++ LLLN L ++N G V P + H + DI+ GL K
Sbjct: 133 I---DKGILNRKGFPESYDMPLLLNFLDTVKNGGDVNIPVYSHEIY-----DIVPGLTQK 184
Query: 229 VVIVDGNYLFLDG 241
I N+L ++G
Sbjct: 185 --ISQPNFLIVEG 195
>sp|B9JG63|COAA_AGRRK Pantothenate kinase OS=Agrobacterium radiobacter (strain K84 / ATCC
BAA-868) GN=coaA PE=3 SV=1
Length = 331
Score = 38.9 bits (89), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 67/155 (43%), Gaps = 23/155 (14%)
Query: 109 IVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFHLYLSQLD 168
++G+AG GKST A +++ + + WP P V ++ DGF ++L
Sbjct: 104 VIGIAGSVAVGKST-TARILKELLRRWPSS----------PKV-DLITTDGFLYPNAELQ 151
Query: 169 AMEDPKEAHARRGAPWTFNPLLLLNCLKNLR-NQGSVYAPSFDHGVGDPVEDDILVGLQH 227
+ R+G P +++ LL L ++ Q V AP + H V D + + +
Sbjct: 152 R----RNLMQRKGFPESYDTAALLRFLSAIKAGQPDVKAPCYSHLVYDVLPSEYKTVDRP 207
Query: 228 KVVIVDG------NYLFLDGGVWKDVSSMFDEKCY 256
++I +G +L DG + VS FD Y
Sbjct: 208 DILIFEGINVLQSRHLPADGKIVPMVSDFFDFSIY 242
>sp|C0ZAS6|URK_BREBN Uridine kinase OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC
100599) GN=udk PE=3 SV=1
Length = 214
Score = 38.9 bits (89), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 66/151 (43%), Gaps = 24/151 (15%)
Query: 109 IVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFHLYLSQLD 168
++G+AG G+GK+T+A E+ R+ D T++ D ++ S L
Sbjct: 6 LIGVAGGSGSGKTTVAKELYRQFQN----------------DSVTMIEQDSYYKDQSHLS 49
Query: 169 AMEDPKEAHARRGAPWTFNPLLLLNCLKNLRNQGSVYAPSFDHGVGDPVEDDILVGLQHK 228
E A P+ F+ LLL L+ L ++ P +D V + + I V +
Sbjct: 50 PEE---RALTNYDHPFAFDNDLLLAHLQELMQGKAIQKPIYDFKVHNRKPEQIQVDPK-D 105
Query: 229 VVIVDGNYLFLDGGVWKDVSSMFDEKCYATS 259
V+I++G + D + + ++ D K Y +
Sbjct: 106 VIILEGMLILED----ERIRNLMDIKVYVDT 132
>sp|P19824|KPPR_CHLRE Phosphoribulokinase, chloroplastic OS=Chlamydomonas reinhardtii
GN=PRKA PE=1 SV=1
Length = 375
Score = 38.9 bits (89), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 70/162 (43%), Gaps = 38/162 (23%)
Query: 109 IVGLAGPPGAGKSTLAAEVVRRINKIW-----PQKASSFDSQVKPPDVATVLPMDGFHLY 163
++GLA G GKST +RR+ I+ P + DS D+ TV+ +D +H
Sbjct: 38 VIGLAADSGCGKSTF----MRRMTSIFGGVPKPPAGGNPDSNTLISDMTTVICLDDYHC- 92
Query: 164 LSQLDAMEDPKEAHARRG----APWTFNPLLLLNCLKNLRNQGSVYAPSFDHGVGDPVED 219
LD + +G AP N L+ N +K L+ SV P ++H G
Sbjct: 93 ---LD-----RNGRKVKGVTALAPEAQNFDLMYNQVKALKEGKSVDKPIYNHVSG----- 139
Query: 220 DILVGLQHK-----VVIVDGNYLFLDGGVWKDVSSMFDEKCY 256
L+ K +++++G + F D K V+ + D K Y
Sbjct: 140 --LIDAPEKIESPPILVIEGLHPFYD----KRVAELLDFKIY 175
>sp|Q7VPK9|COAA_HAEDU Pantothenate kinase OS=Haemophilus ducreyi (strain 35000HP / ATCC
700724) GN=coaA PE=3 SV=1
Length = 316
Score = 38.9 bits (89), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 65/130 (50%), Gaps = 17/130 (13%)
Query: 106 VKHIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFHLYLS 165
V +I+ LAG GKST +A +++ + WP + + D+ T DGF L+
Sbjct: 87 VPYIISLAGSVSVGKST-SARILQALLCQWPVE--------RKVDLITT---DGFLYPLA 134
Query: 166 QLDAMEDPKEAHARRGAPWTFNPLLLLNCLKNLRN-QGSVYAPSFDHGVGDPVEDDILVG 224
L A K R+G P +++ L+ + +L++ + ++ AP + H D + D V
Sbjct: 135 ILQA----KNLLNRKGFPESYDIHRLIKFVSDLKSGERNIKAPIYSHLTYDIIPDRYSVV 190
Query: 225 LQHKVVIVDG 234
Q ++VI++G
Sbjct: 191 DQPEIVILEG 200
>sp|Q8UJ92|COAA_AGRT5 Pantothenate kinase OS=Agrobacterium tumefaciens (strain C58 / ATCC
33970) GN=coaA PE=3 SV=2
Length = 322
Score = 38.9 bits (89), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 82/190 (43%), Gaps = 45/190 (23%)
Query: 109 IVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFHLYLSQLD 168
++G+AG GKST A +++ + WP P V ++ DGF LY +++
Sbjct: 95 VIGIAGSVAVGKST-TARILKELLARWPSS----------PKV-DLITTDGF-LYPNEVL 141
Query: 169 AMEDPKEAHARRGAPWTFNPLLLLNCLKNLR-NQGSVYAPSFDHGVGDPVEDDILVGLQH 227
E+ E R+G P +++ LL L ++ Q +V AP + H D + ++ V Q
Sbjct: 142 RRENLME---RKGFPESYDIGALLRFLSAIKAGQPNVKAPRYSHLTYDVLPNEFTVIDQP 198
Query: 228 KVVIVDG-NYL-----------------FLDGGVWKDVSSMFDEKCYA--------TSFK 261
++I +G N L F D ++ D F Y T+F+
Sbjct: 199 DILIFEGINVLQSRDLPAGGRIVPIVSDFFDFSIYIDADEDFIHNWYVNRFMNLRQTAFR 258
Query: 262 E--TYFNREA 269
+ ++FNR A
Sbjct: 259 DPNSFFNRYA 268
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.133 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 105,430,586
Number of Sequences: 539616
Number of extensions: 4466204
Number of successful extensions: 24667
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 319
Number of HSP's that attempted gapping in prelim test: 24477
Number of HSP's gapped (non-prelim): 456
length of query: 270
length of database: 191,569,459
effective HSP length: 116
effective length of query: 154
effective length of database: 128,974,003
effective search space: 19861996462
effective search space used: 19861996462
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)