Query 024228
Match_columns 270
No_of_seqs 383 out of 1255
Neff 11.7
Searched_HMMs 46136
Date Fri Mar 29 03:00:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024228.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/024228hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02824 hydrolase, alpha/beta 100.0 1.6E-37 3.5E-42 239.7 24.1 239 19-262 6-294 (294)
2 TIGR02240 PHA_depoly_arom poly 100.0 6.4E-37 1.4E-41 234.2 23.1 238 24-265 5-269 (276)
3 PRK03592 haloalkane dehalogena 100.0 4E-36 8.6E-41 232.1 23.0 239 20-264 6-291 (295)
4 PRK00870 haloalkane dehalogena 100.0 5.6E-35 1.2E-39 226.2 21.4 237 21-262 19-301 (302)
5 PLN02679 hydrolase, alpha/beta 100.0 1.9E-34 4.1E-39 227.4 23.4 238 23-263 63-358 (360)
6 PRK03204 haloalkane dehalogena 100.0 7.2E-34 1.6E-38 217.7 23.2 233 21-259 14-285 (286)
7 PLN02965 Probable pheophorbida 100.0 5.9E-34 1.3E-38 215.3 22.2 215 46-263 4-254 (255)
8 KOG4178 Soluble epoxide hydrol 100.0 6.9E-34 1.5E-38 209.7 20.6 243 17-262 18-320 (322)
9 PLN02578 hydrolase 100.0 2.7E-33 5.9E-38 220.6 24.9 229 25-260 70-353 (354)
10 TIGR03056 bchO_mg_che_rel puta 100.0 2.4E-33 5.2E-38 215.2 23.1 234 23-260 8-278 (278)
11 PLN02385 hydrolase; alpha/beta 100.0 6.2E-34 1.3E-38 224.2 20.2 242 22-264 62-347 (349)
12 PRK10349 carboxylesterase BioH 100.0 1.1E-33 2.4E-38 214.2 19.9 219 34-261 4-255 (256)
13 PLN03087 BODYGUARD 1 domain co 100.0 8.5E-33 1.8E-37 220.9 24.9 237 22-261 177-478 (481)
14 TIGR03343 biphenyl_bphD 2-hydr 100.0 9.4E-33 2E-37 212.2 23.7 225 31-260 19-281 (282)
15 PLN03084 alpha/beta hydrolase 100.0 1.5E-32 3.2E-37 215.6 25.0 233 24-260 107-382 (383)
16 PRK10673 acyl-CoA esterase; Pr 100.0 1.6E-33 3.5E-38 213.4 19.1 220 39-261 10-254 (255)
17 PRK06489 hypothetical protein; 100.0 4.3E-33 9.3E-38 220.1 22.1 231 30-263 48-358 (360)
18 TIGR03611 RutD pyrimidine util 100.0 4.4E-33 9.5E-38 211.2 21.1 224 35-260 2-256 (257)
19 PRK10749 lysophospholipase L2; 100.0 2.3E-32 5E-37 213.5 24.6 240 22-262 31-329 (330)
20 TIGR02427 protocat_pcaD 3-oxoa 100.0 5.5E-33 1.2E-37 209.8 19.1 225 34-260 2-251 (251)
21 PHA02857 monoglyceride lipase; 100.0 6.3E-32 1.4E-36 206.8 25.0 237 25-262 4-273 (276)
22 PLN02298 hydrolase, alpha/beta 100.0 4.4E-32 9.5E-37 212.6 24.4 243 22-264 33-319 (330)
23 KOG4409 Predicted hydrolase/ac 100.0 1.8E-31 3.8E-36 197.6 22.7 239 22-262 66-364 (365)
24 KOG1454 Predicted hydrolase/ac 100.0 1E-31 2.2E-36 206.4 19.9 244 18-263 22-325 (326)
25 PRK11126 2-succinyl-6-hydroxy- 100.0 2E-31 4.3E-36 200.4 21.0 207 45-261 2-241 (242)
26 PLN02211 methyl indole-3-aceta 100.0 7.5E-31 1.6E-35 199.2 22.0 228 30-262 5-270 (273)
27 PRK07581 hypothetical protein; 100.0 7.7E-31 1.7E-35 206.2 21.3 233 30-264 24-338 (339)
28 TIGR01250 pro_imino_pep_2 prol 100.0 2.5E-30 5.5E-35 199.2 23.6 233 25-260 6-288 (288)
29 PF12697 Abhydrolase_6: Alpha/ 100.0 2.2E-31 4.7E-36 198.1 16.4 205 48-254 1-228 (228)
30 PRK00175 metX homoserine O-ace 100.0 2E-30 4.4E-35 205.7 22.1 234 30-265 31-377 (379)
31 TIGR01738 bioH putative pimelo 100.0 8E-31 1.7E-35 197.3 18.9 208 45-259 4-245 (245)
32 PRK08775 homoserine O-acetyltr 100.0 8.8E-31 1.9E-35 205.8 19.8 238 21-263 36-340 (343)
33 PLN02894 hydrolase, alpha/beta 100.0 9.5E-30 2.1E-34 202.6 25.1 233 33-267 93-390 (402)
34 TIGR01392 homoserO_Ac_trn homo 100.0 1.9E-30 4.1E-35 204.5 20.2 230 30-260 14-351 (351)
35 PRK14875 acetoin dehydrogenase 100.0 1.4E-29 3.1E-34 201.9 22.4 229 25-261 113-370 (371)
36 PLN02652 hydrolase; alpha/beta 100.0 4.3E-29 9.4E-34 197.3 24.3 242 22-265 111-390 (395)
37 TIGR03695 menH_SHCHC 2-succiny 100.0 1.1E-29 2.4E-34 191.6 20.2 213 45-260 1-251 (251)
38 PLN02980 2-oxoglutarate decarb 100.0 3.9E-29 8.5E-34 226.7 26.6 254 11-266 1334-1643(1655)
39 TIGR01249 pro_imino_pep_1 prol 100.0 9.7E-29 2.1E-33 191.4 21.7 232 22-260 5-303 (306)
40 COG2267 PldB Lysophospholipase 100.0 2.7E-28 5.8E-33 185.9 23.0 243 21-264 9-296 (298)
41 KOG1455 Lysophospholipase [Lip 100.0 3E-28 6.5E-33 177.3 21.1 242 21-262 27-312 (313)
42 PRK13604 luxD acyl transferase 100.0 1.4E-27 3E-32 178.6 22.4 232 22-262 10-259 (307)
43 COG1647 Esterase/lipase [Gener 100.0 7.9E-28 1.7E-32 166.8 17.9 211 45-261 15-243 (243)
44 PLN02511 hydrolase 100.0 9.3E-28 2E-32 190.6 20.3 244 20-264 70-367 (388)
45 PRK05077 frsA fermentation/res 100.0 6.5E-27 1.4E-31 186.5 24.3 235 21-263 168-413 (414)
46 KOG2984 Predicted hydrolase [G 100.0 1.8E-28 4E-33 167.1 12.5 239 20-262 20-276 (277)
47 PRK05855 short chain dehydroge 100.0 7.4E-27 1.6E-31 196.9 20.7 231 29-263 10-293 (582)
48 TIGR01607 PST-A Plasmodium sub 99.9 5.3E-26 1.2E-30 177.2 20.6 233 27-260 3-331 (332)
49 KOG2382 Predicted alpha/beta h 99.9 8.5E-26 1.8E-30 167.2 19.1 222 38-263 45-314 (315)
50 PRK06765 homoserine O-acetyltr 99.9 2.4E-24 5.1E-29 169.8 22.8 231 31-261 40-387 (389)
51 PRK10985 putative hydrolase; P 99.9 4.3E-24 9.3E-29 166.5 23.0 242 21-263 31-321 (324)
52 TIGR03100 hydr1_PEP hydrolase, 99.9 1.1E-23 2.3E-28 160.4 23.8 225 30-260 10-273 (274)
53 KOG4391 Predicted alpha/beta h 99.9 3E-25 6.6E-30 153.2 13.1 221 22-264 55-284 (300)
54 PLN02872 triacylglycerol lipas 99.9 7.2E-24 1.6E-28 167.0 19.7 245 19-265 42-392 (395)
55 PRK11071 esterase YqiA; Provis 99.9 1.3E-23 2.7E-28 150.6 18.8 183 46-260 2-189 (190)
56 PRK10566 esterase; Provisional 99.9 4.7E-23 1E-27 155.5 21.8 212 34-262 15-248 (249)
57 KOG1552 Predicted alpha/beta h 99.9 2.8E-23 6.1E-28 148.5 16.3 217 20-265 34-255 (258)
58 PF00561 Abhydrolase_1: alpha/ 99.9 1.1E-23 2.3E-28 157.2 12.6 183 73-256 1-229 (230)
59 TIGR01836 PHA_synth_III_C poly 99.9 6.2E-22 1.3E-26 156.1 21.6 236 21-261 36-349 (350)
60 KOG2564 Predicted acetyltransf 99.9 1.8E-22 4E-27 144.9 14.7 123 23-147 50-182 (343)
61 PF12695 Abhydrolase_5: Alpha/ 99.9 4.5E-22 9.8E-27 137.6 16.3 142 47-242 1-145 (145)
62 COG1506 DAP2 Dipeptidyl aminop 99.9 1E-20 2.2E-25 158.7 21.2 237 16-264 360-618 (620)
63 TIGR01838 PHA_synth_I poly(R)- 99.9 3.8E-20 8.2E-25 150.1 19.8 203 44-248 187-461 (532)
64 COG0596 MhpC Predicted hydrola 99.9 7.3E-20 1.6E-24 139.2 20.1 225 31-260 9-280 (282)
65 COG3208 GrsT Predicted thioest 99.9 5E-20 1.1E-24 131.1 17.0 213 43-262 5-236 (244)
66 PRK11460 putative hydrolase; P 99.9 5.1E-20 1.1E-24 136.4 16.7 172 43-259 14-209 (232)
67 COG0429 Predicted hydrolase of 99.9 1.7E-19 3.7E-24 133.7 18.4 243 21-263 49-341 (345)
68 PF00326 Peptidase_S9: Prolyl 99.9 4.6E-20 1E-24 135.7 15.2 192 61-264 2-211 (213)
69 PF03096 Ndr: Ndr family; Int 99.9 5.9E-19 1.3E-23 129.8 20.6 235 23-262 1-279 (283)
70 TIGR03101 hydr2_PEP hydrolase, 99.8 5.4E-20 1.2E-24 137.4 15.2 125 25-149 4-136 (266)
71 PRK07868 acyl-CoA synthetase; 99.8 2.3E-19 4.9E-24 158.5 21.5 230 30-264 47-363 (994)
72 TIGR02821 fghA_ester_D S-formy 99.8 5.2E-19 1.1E-23 134.8 20.6 197 30-245 23-259 (275)
73 KOG4667 Predicted esterase [Li 99.8 9.2E-20 2E-24 126.1 14.4 210 43-260 31-256 (269)
74 PF06342 DUF1057: Alpha/beta h 99.8 4.6E-18 1E-22 123.6 22.3 102 45-149 35-139 (297)
75 PLN00021 chlorophyllase 99.8 7.8E-19 1.7E-23 134.7 17.2 186 31-248 38-246 (313)
76 PLN02442 S-formylglutathione h 99.8 4E-18 8.7E-23 130.1 20.5 197 32-244 32-264 (283)
77 PF06500 DUF1100: Alpha/beta h 99.8 1.7E-18 3.7E-23 134.0 17.8 231 21-262 165-409 (411)
78 KOG1838 Alpha/beta hydrolase [ 99.8 1.4E-17 2.9E-22 128.2 20.5 243 20-263 92-389 (409)
79 KOG2931 Differentiation-relate 99.8 4.1E-17 9E-22 118.5 21.3 239 21-262 22-306 (326)
80 TIGR01840 esterase_phb esteras 99.8 4.3E-18 9.3E-23 124.9 16.5 169 43-228 11-195 (212)
81 PRK10162 acetyl esterase; Prov 99.8 3.8E-17 8.3E-22 126.9 22.2 227 22-263 58-316 (318)
82 PF05448 AXE1: Acetyl xylan es 99.8 1.2E-16 2.6E-21 122.9 20.9 228 26-262 61-320 (320)
83 PF06821 Ser_hydrolase: Serine 99.8 2E-17 4.3E-22 115.7 15.0 157 48-248 1-159 (171)
84 PF02230 Abhydrolase_2: Phosph 99.8 2E-17 4.3E-22 121.7 15.2 178 41-262 10-215 (216)
85 PF01738 DLH: Dienelactone hyd 99.8 5.1E-17 1.1E-21 119.9 17.1 183 37-262 6-217 (218)
86 PF00975 Thioesterase: Thioest 99.8 9E-17 2E-21 119.7 16.5 210 46-259 1-229 (229)
87 COG2945 Predicted hydrolase of 99.7 2.7E-16 5.8E-21 107.4 16.3 170 42-260 25-205 (210)
88 COG2021 MET2 Homoserine acetyl 99.7 2.9E-16 6.3E-21 118.6 17.8 232 30-261 34-367 (368)
89 COG0400 Predicted esterase [Ge 99.7 5.9E-17 1.3E-21 115.7 13.5 172 42-261 15-204 (207)
90 COG0412 Dienelactone hydrolase 99.7 3.6E-15 7.9E-20 110.1 20.4 196 23-263 4-234 (236)
91 TIGR03230 lipo_lipase lipoprot 99.7 1.5E-16 3.3E-21 125.8 13.3 107 43-149 39-156 (442)
92 PF05728 UPF0227: Uncharacteri 99.7 1E-15 2.2E-20 108.1 15.4 180 48-259 2-186 (187)
93 TIGR01849 PHB_depoly_PhaZ poly 99.7 9.7E-15 2.1E-19 114.4 21.6 215 45-261 102-405 (406)
94 PRK10115 protease 2; Provision 99.7 4.5E-15 9.7E-20 125.8 19.9 216 20-243 415-654 (686)
95 PF02273 Acyl_transf_2: Acyl t 99.7 3.2E-14 7E-19 101.0 20.5 221 23-249 4-243 (294)
96 cd00707 Pancreat_lipase_like P 99.7 2.2E-16 4.8E-21 119.6 9.6 117 31-149 24-149 (275)
97 COG3458 Acetyl esterase (deace 99.7 4.1E-15 8.9E-20 107.1 15.2 232 19-263 52-318 (321)
98 COG4757 Predicted alpha/beta h 99.7 1.2E-14 2.7E-19 102.2 15.1 232 24-259 8-280 (281)
99 TIGR00976 /NonD putative hydro 99.7 5.9E-15 1.3E-19 123.0 15.9 121 27-148 2-133 (550)
100 PF07859 Abhydrolase_3: alpha/ 99.6 1.3E-14 2.8E-19 106.7 12.0 186 48-244 1-210 (211)
101 KOG2624 Triglyceride lipase-ch 99.6 9.6E-14 2.1E-18 108.7 17.3 242 20-263 47-399 (403)
102 TIGR01839 PHA_synth_II poly(R) 99.6 1.6E-13 3.4E-18 110.9 18.0 207 30-243 199-482 (560)
103 COG3571 Predicted hydrolase of 99.6 3.3E-13 7.2E-18 89.5 16.3 181 44-262 13-211 (213)
104 PF12146 Hydrolase_4: Putative 99.6 1.1E-14 2.4E-19 87.9 8.0 76 31-107 1-79 (79)
105 KOG2565 Predicted hydrolases o 99.6 2.7E-13 5.8E-18 102.0 16.4 120 25-146 128-263 (469)
106 COG3545 Predicted esterase of 99.6 3.6E-13 7.9E-18 91.2 15.3 172 46-261 3-178 (181)
107 PF10230 DUF2305: Uncharacteri 99.5 2.1E-12 4.5E-17 97.5 18.3 103 45-148 2-123 (266)
108 PF09752 DUF2048: Uncharacteri 99.5 2.4E-12 5.1E-17 97.7 17.6 211 43-260 90-347 (348)
109 KOG1515 Arylacetamide deacetyl 99.5 1.1E-11 2.4E-16 95.2 21.1 231 21-262 61-335 (336)
110 PF12740 Chlorophyllase2: Chlo 99.5 4.3E-13 9.3E-18 98.3 12.5 183 34-248 6-211 (259)
111 TIGR03502 lipase_Pla1_cef extr 99.5 1.7E-13 3.7E-18 115.3 11.7 107 25-132 421-575 (792)
112 PRK10252 entF enterobactin syn 99.5 5.1E-13 1.1E-17 122.8 15.4 197 44-248 1067-1281(1296)
113 PF08538 DUF1749: Protein of u 99.5 4.8E-13 1E-17 99.9 12.1 210 44-260 32-303 (303)
114 COG0657 Aes Esterase/lipase [L 99.5 3.7E-12 8.1E-17 99.2 15.7 218 32-260 64-308 (312)
115 PF02129 Peptidase_S15: X-Pro 99.5 1.5E-11 3.3E-16 93.8 18.7 119 30-149 1-138 (272)
116 PRK05371 x-prolyl-dipeptidyl a 99.5 8.2E-12 1.8E-16 106.9 18.4 197 65-263 271-520 (767)
117 PF06028 DUF915: Alpha/beta hy 99.5 7.4E-12 1.6E-16 92.8 15.7 201 44-259 10-252 (255)
118 KOG3975 Uncharacterized conser 99.5 7.1E-11 1.5E-15 84.4 19.4 224 34-259 18-300 (301)
119 PTZ00472 serine carboxypeptida 99.4 3E-11 6.4E-16 98.1 19.3 125 23-148 49-217 (462)
120 KOG3043 Predicted hydrolase re 99.4 5.7E-12 1.2E-16 88.7 13.0 181 37-262 31-240 (242)
121 KOG2100 Dipeptidyl aminopeptid 99.4 3.5E-11 7.7E-16 102.8 19.8 231 16-265 493-750 (755)
122 PF03959 FSH1: Serine hydrolas 99.4 4.9E-12 1.1E-16 92.6 12.5 162 44-247 3-206 (212)
123 PF10503 Esterase_phd: Esteras 99.4 3E-11 6.6E-16 87.6 16.0 167 44-228 15-196 (220)
124 KOG4627 Kynurenine formamidase 99.4 3E-12 6.6E-17 88.6 10.1 201 21-247 43-252 (270)
125 COG3319 Thioesterase domains o 99.4 5.6E-11 1.2E-15 87.9 16.4 100 46-148 1-104 (257)
126 PF12715 Abhydrolase_7: Abhydr 99.4 1E-12 2.2E-17 100.7 7.5 129 19-148 84-261 (390)
127 KOG2551 Phospholipase/carboxyh 99.4 7.6E-11 1.7E-15 83.1 15.2 176 44-264 4-222 (230)
128 PF07224 Chlorophyllase: Chlor 99.4 1.8E-11 3.9E-16 88.3 11.3 179 33-246 34-234 (307)
129 PF08840 BAAT_C: BAAT / Acyl-C 99.3 1E-11 2.2E-16 90.7 10.0 164 99-264 6-212 (213)
130 KOG2281 Dipeptidyl aminopeptid 99.3 6.6E-11 1.4E-15 95.3 15.1 223 24-261 616-866 (867)
131 PF07819 PGAP1: PGAP1-like pro 99.3 3.1E-11 6.6E-16 88.7 11.5 106 44-150 3-126 (225)
132 PF06057 VirJ: Bacterial virul 99.3 3.6E-11 7.8E-16 83.5 10.7 178 46-260 3-190 (192)
133 PF03403 PAF-AH_p_II: Platelet 99.3 4.4E-11 9.5E-16 94.5 12.2 157 43-245 98-318 (379)
134 KOG2112 Lysophospholipase [Lip 99.3 8.1E-11 1.8E-15 82.4 12.1 174 45-261 3-203 (206)
135 COG3243 PhaC Poly(3-hydroxyalk 99.3 1.1E-10 2.4E-15 90.1 13.3 103 44-150 106-220 (445)
136 PRK04940 hypothetical protein; 99.3 1E-09 2.2E-14 76.3 15.6 170 48-260 2-178 (180)
137 PF00450 Peptidase_S10: Serine 99.2 1.7E-09 3.6E-14 88.0 18.5 127 22-149 12-183 (415)
138 smart00824 PKS_TE Thioesterase 99.2 5.9E-10 1.3E-14 81.9 13.8 198 50-258 2-211 (212)
139 KOG1553 Predicted alpha/beta h 99.1 7.3E-10 1.6E-14 83.2 10.7 178 19-216 212-398 (517)
140 COG3509 LpqC Poly(3-hydroxybut 99.1 1.1E-08 2.4E-13 75.7 15.9 125 21-147 35-179 (312)
141 COG4099 Predicted peptidase [G 99.1 3.1E-09 6.6E-14 78.3 12.7 156 29-228 169-342 (387)
142 COG4188 Predicted dienelactone 99.1 1.7E-10 3.7E-15 88.0 6.3 202 44-251 70-303 (365)
143 KOG3253 Predicted alpha/beta h 99.1 5.2E-09 1.1E-13 84.1 13.7 177 44-262 175-374 (784)
144 COG3150 Predicted esterase [Ge 99.0 3.3E-08 7.2E-13 66.6 14.0 91 48-150 2-94 (191)
145 PRK10439 enterobactin/ferric e 99.0 1.8E-07 4E-12 75.1 20.3 182 32-243 194-392 (411)
146 PF00151 Lipase: Lipase; Inte 99.0 4.8E-10 1E-14 86.9 5.1 107 43-149 69-189 (331)
147 COG4814 Uncharacterized protei 99.0 1E-07 2.2E-12 68.9 15.7 200 46-261 46-286 (288)
148 PF03583 LIP: Secretory lipase 99.0 8.8E-08 1.9E-12 73.5 16.6 60 202-264 220-283 (290)
149 PF01674 Lipase_2: Lipase (cla 99.0 7.4E-10 1.6E-14 80.3 5.0 87 46-133 2-96 (219)
150 KOG3847 Phospholipase A2 (plat 99.0 1E-08 2.2E-13 76.1 10.8 161 43-249 116-335 (399)
151 PF05705 DUF829: Eukaryotic pr 99.0 1E-07 2.2E-12 71.5 16.0 210 47-259 1-240 (240)
152 PLN02733 phosphatidylcholine-s 98.9 3.4E-09 7.5E-14 85.0 8.0 92 57-149 106-203 (440)
153 PF05677 DUF818: Chlamydia CHL 98.9 6E-08 1.3E-12 73.4 12.0 109 20-133 111-236 (365)
154 PF10142 PhoPQ_related: PhoPQ- 98.9 7.3E-07 1.6E-11 69.7 18.1 141 110-263 170-321 (367)
155 COG1505 Serine proteases of th 98.9 4E-08 8.8E-13 79.3 11.2 231 22-261 395-645 (648)
156 PF11339 DUF3141: Protein of u 98.8 9E-07 2E-11 70.7 18.1 99 44-149 67-177 (581)
157 PF10340 DUF2424: Protein of u 98.8 3.8E-07 8.3E-12 71.0 15.6 105 44-150 121-238 (374)
158 PF05990 DUF900: Alpha/beta hy 98.8 3.4E-08 7.3E-13 73.2 9.2 106 43-148 16-138 (233)
159 PF00756 Esterase: Putative es 98.8 1.2E-07 2.5E-12 71.8 11.1 117 33-150 9-153 (251)
160 PF12048 DUF3530: Protein of u 98.8 9.3E-06 2E-10 62.9 21.1 202 22-262 63-309 (310)
161 PF05057 DUF676: Putative seri 98.7 4.3E-08 9.4E-13 72.0 6.6 86 44-131 3-97 (217)
162 PF11144 DUF2920: Protein of u 98.7 3.9E-06 8.5E-11 65.7 16.8 36 113-148 185-220 (403)
163 PLN02606 palmitoyl-protein thi 98.7 4.4E-06 9.6E-11 63.0 16.4 100 44-147 25-132 (306)
164 COG1075 LipA Predicted acetylt 98.7 1.2E-07 2.7E-12 74.2 8.2 102 45-149 59-166 (336)
165 PLN02209 serine carboxypeptida 98.6 1.2E-05 2.6E-10 65.1 18.8 125 23-148 41-213 (437)
166 PF04301 DUF452: Protein of un 98.6 1.2E-06 2.6E-11 63.0 10.6 81 44-148 10-91 (213)
167 PLN02633 palmitoyl protein thi 98.6 1E-05 2.2E-10 61.2 15.7 100 44-147 24-131 (314)
168 COG4782 Uncharacterized protei 98.6 6.2E-07 1.3E-11 68.5 9.1 106 43-148 114-235 (377)
169 KOG1282 Serine carboxypeptidas 98.6 2.7E-05 5.8E-10 62.8 18.6 126 22-149 45-215 (454)
170 PLN03016 sinapoylglucose-malat 98.5 6.1E-05 1.3E-09 61.1 20.6 126 22-148 38-211 (433)
171 KOG4840 Predicted hydrolases o 98.5 5.3E-06 1.1E-10 59.0 12.4 102 45-149 36-146 (299)
172 PF05577 Peptidase_S28: Serine 98.5 2.1E-06 4.7E-11 70.2 11.9 115 33-148 15-149 (434)
173 KOG2237 Predicted serine prote 98.5 3.4E-06 7.3E-11 69.0 12.6 237 21-263 441-706 (712)
174 COG2936 Predicted acyl esteras 98.5 7.8E-07 1.7E-11 72.6 9.1 126 23-148 21-160 (563)
175 KOG1551 Uncharacterized conser 98.5 5.8E-06 1.3E-10 60.4 12.0 209 45-263 113-367 (371)
176 COG1073 Hydrolases of the alph 98.5 1.3E-05 2.8E-10 62.0 14.5 215 44-262 48-297 (299)
177 cd00312 Esterase_lipase Estera 98.5 1.2E-06 2.6E-11 73.0 9.2 119 28-148 75-214 (493)
178 COG1770 PtrB Protease II [Amin 98.4 4.3E-05 9.2E-10 63.2 16.7 221 22-249 420-663 (682)
179 PF08386 Abhydrolase_4: TAP-li 98.4 2E-06 4.4E-11 55.0 6.8 62 202-264 35-96 (103)
180 KOG3101 Esterase D [General fu 98.4 4.3E-06 9.4E-11 58.9 8.4 193 34-245 30-264 (283)
181 KOG3724 Negative regulator of 98.3 1.3E-05 2.9E-10 67.2 11.2 123 23-149 59-222 (973)
182 COG2272 PnbA Carboxylesterase 98.3 8.7E-06 1.9E-10 65.1 9.8 120 29-148 77-218 (491)
183 COG2939 Carboxypeptidase C (ca 98.3 5.1E-05 1.1E-09 60.9 13.4 104 43-147 99-236 (498)
184 COG4553 DepA Poly-beta-hydroxy 98.2 0.00021 4.5E-09 53.3 14.9 105 44-149 102-211 (415)
185 PF00135 COesterase: Carboxyle 98.2 1.4E-05 3E-10 67.5 9.9 119 28-147 105-245 (535)
186 PLN02213 sinapoylglucose-malat 98.1 0.00031 6.6E-09 55.0 15.5 59 202-261 234-316 (319)
187 KOG2541 Palmitoyl protein thio 98.1 5.9E-05 1.3E-09 55.4 10.3 99 46-147 24-128 (296)
188 COG0627 Predicted esterase [Ge 98.0 0.00025 5.4E-09 54.9 13.2 53 98-150 133-190 (316)
189 COG2382 Fes Enterochelin ester 98.0 0.00019 4E-09 54.1 12.0 107 43-149 96-214 (299)
190 PF07519 Tannase: Tannase and 97.9 0.0015 3.3E-08 53.9 16.6 84 65-149 52-152 (474)
191 PF04083 Abhydro_lipase: Parti 97.9 3.3E-05 7.1E-10 44.1 4.9 42 20-62 11-59 (63)
192 PF05576 Peptidase_S37: PS-10 97.9 0.00012 2.7E-09 57.3 9.4 101 44-146 62-168 (448)
193 COG3946 VirJ Type IV secretory 97.9 5.3E-05 1.1E-09 59.0 6.5 85 45-135 260-349 (456)
194 COG2819 Predicted hydrolase of 97.9 0.0011 2.4E-08 49.3 13.0 53 99-151 121-176 (264)
195 PF02089 Palm_thioest: Palmito 97.8 3.1E-05 6.7E-10 58.1 4.6 103 44-147 4-116 (279)
196 PF02450 LCAT: Lecithin:choles 97.8 0.00016 3.5E-09 58.1 8.2 81 61-149 66-162 (389)
197 KOG2183 Prolylcarboxypeptidase 97.8 0.00016 3.4E-09 56.6 7.7 101 45-146 80-201 (492)
198 KOG3967 Uncharacterized conser 97.7 0.0012 2.6E-08 47.0 11.1 129 18-147 69-227 (297)
199 cd00741 Lipase Lipase. Lipase 97.6 0.00018 3.9E-09 49.9 6.0 50 99-148 11-68 (153)
200 COG4947 Uncharacterized protei 97.6 0.0012 2.6E-08 45.3 8.7 45 105-149 94-138 (227)
201 TIGR03712 acc_sec_asp2 accesso 97.5 0.032 7E-07 45.3 17.9 112 31-148 275-391 (511)
202 PF01764 Lipase_3: Lipase (cla 97.5 0.00041 8.9E-09 47.3 5.8 37 97-133 49-85 (140)
203 KOG2182 Hydrolytic enzymes of 97.4 0.0015 3.2E-08 52.7 8.9 105 43-148 84-208 (514)
204 PF07082 DUF1350: Protein of u 97.4 0.019 4.1E-07 42.5 13.4 90 47-145 19-123 (250)
205 COG4287 PqaA PhoPQ-activated p 97.3 0.00069 1.5E-08 52.3 6.1 149 106-262 228-387 (507)
206 KOG2521 Uncharacterized conser 97.3 0.051 1.1E-06 42.7 15.6 222 44-265 37-293 (350)
207 PF06259 Abhydrolase_8: Alpha/ 97.1 0.047 1E-06 38.6 13.5 53 96-148 88-145 (177)
208 PF11187 DUF2974: Protein of u 97.1 0.0016 3.4E-08 48.1 6.1 47 101-148 74-124 (224)
209 KOG1516 Carboxylesterase and r 97.1 0.0053 1.1E-07 52.2 10.2 118 29-147 94-232 (545)
210 KOG2369 Lecithin:cholesterol a 97.1 0.00082 1.8E-08 53.8 4.3 85 61-146 125-224 (473)
211 KOG1202 Animal-type fatty acid 97.1 0.032 7E-07 50.3 13.9 96 43-148 2121-2220(2376)
212 PLN02517 phosphatidylcholine-s 97.0 0.0037 7.9E-08 52.0 7.6 84 61-149 157-265 (642)
213 COG2830 Uncharacterized protei 97.0 0.0093 2E-07 40.6 8.0 79 45-147 11-90 (214)
214 cd00519 Lipase_3 Lipase (class 97.0 0.0016 3.4E-08 48.6 5.1 24 110-133 126-149 (229)
215 PLN02162 triacylglycerol lipas 96.8 0.0043 9.4E-08 50.1 6.4 34 98-131 264-297 (475)
216 PLN00413 triacylglycerol lipas 96.8 0.0054 1.2E-07 49.7 6.6 35 97-131 269-303 (479)
217 PLN02571 triacylglycerol lipas 96.6 0.0039 8.4E-08 49.8 4.9 37 96-132 208-246 (413)
218 PF06441 EHN: Epoxide hydrolas 96.6 0.009 2E-07 38.7 5.7 47 17-65 64-111 (112)
219 PLN02454 triacylglycerol lipas 96.6 0.0045 9.8E-08 49.4 5.2 33 100-132 214-248 (414)
220 PLN02408 phospholipase A1 96.4 0.0069 1.5E-07 47.7 4.9 36 98-133 184-221 (365)
221 PF01083 Cutinase: Cutinase; 96.3 0.012 2.5E-07 42.0 5.6 74 73-148 40-123 (179)
222 KOG4372 Predicted alpha/beta h 96.3 0.0074 1.6E-07 47.6 4.8 87 43-130 78-168 (405)
223 KOG1283 Serine carboxypeptidas 96.3 0.037 8E-07 42.4 8.1 125 25-149 7-168 (414)
224 PF11288 DUF3089: Protein of u 96.3 0.013 2.8E-07 42.4 5.4 67 67-133 40-116 (207)
225 PLN02934 triacylglycerol lipas 96.1 0.012 2.6E-07 48.1 5.0 35 97-131 306-340 (515)
226 PLN02310 triacylglycerol lipas 96.0 0.022 4.7E-07 45.6 6.2 37 96-132 189-229 (405)
227 PLN02324 triacylglycerol lipas 96.0 0.012 2.7E-07 47.0 4.8 35 98-132 199-235 (415)
228 PF05277 DUF726: Protein of un 96.0 0.031 6.7E-07 44.0 6.8 41 110-150 218-263 (345)
229 PLN02802 triacylglycerol lipas 95.8 0.017 3.8E-07 47.2 4.9 37 97-133 313-351 (509)
230 PLN02753 triacylglycerol lipas 95.7 0.021 4.5E-07 47.0 4.8 36 97-132 292-332 (531)
231 PLN03037 lipase class 3 family 95.6 0.024 5.3E-07 46.5 4.8 36 97-132 299-338 (525)
232 PLN02719 triacylglycerol lipas 95.5 0.027 5.8E-07 46.2 4.8 35 98-132 279-318 (518)
233 PLN02761 lipase class 3 family 95.4 0.028 6E-07 46.3 4.7 35 97-131 273-313 (527)
234 KOG4569 Predicted lipase [Lipi 95.3 0.034 7.3E-07 44.0 4.7 37 96-132 155-191 (336)
235 PF06850 PHB_depo_C: PHB de-po 95.3 0.045 9.7E-07 38.9 4.7 60 202-261 135-201 (202)
236 PF03283 PAE: Pectinacetyleste 95.2 0.18 4E-06 40.3 8.6 22 111-132 155-176 (361)
237 KOG4388 Hormone-sensitive lipa 95.1 0.021 4.5E-07 47.3 3.1 110 34-146 385-507 (880)
238 PLN02847 triacylglycerol lipas 94.4 0.089 1.9E-06 44.2 5.0 24 109-132 248-271 (633)
239 PF09949 DUF2183: Uncharacteri 94.1 0.6 1.3E-05 29.6 7.3 82 61-142 12-97 (100)
240 COG5153 CVT17 Putative lipase 93.0 0.26 5.7E-06 37.3 4.9 40 104-145 268-307 (425)
241 KOG4540 Putative lipase essent 93.0 0.26 5.7E-06 37.3 4.9 40 104-145 268-307 (425)
242 PF08237 PE-PPE: PE-PPE domain 92.0 0.99 2.1E-05 33.5 7.0 61 73-133 3-69 (225)
243 KOG2029 Uncharacterized conser 90.0 0.67 1.4E-05 39.0 4.8 49 99-147 510-572 (697)
244 KOG4389 Acetylcholinesterase/B 89.1 1.8 3.8E-05 35.8 6.4 116 30-147 119-255 (601)
245 KOG2385 Uncharacterized conser 88.6 0.83 1.8E-05 37.8 4.3 44 109-152 444-492 (633)
246 COG1448 TyrB Aspartate/tyrosin 84.1 9.6 0.00021 30.6 7.9 89 44-146 170-264 (396)
247 PRK12467 peptide synthase; Pro 83.6 7.1 0.00015 42.2 9.0 97 45-144 3692-3792(3956)
248 PF09994 DUF2235: Uncharacteri 83.3 16 0.00035 28.2 9.0 26 107-132 86-112 (277)
249 PF10081 Abhydrolase_9: Alpha/ 77.8 15 0.00032 28.3 6.8 82 66-148 54-148 (289)
250 smart00827 PKS_AT Acyl transfe 77.8 3.4 7.3E-05 32.2 3.8 31 102-132 72-102 (298)
251 cd07198 Patatin Patatin-like p 77.6 5 0.00011 28.3 4.3 33 102-134 16-48 (172)
252 PF00698 Acyl_transf_1: Acyl t 77.2 2.2 4.8E-05 33.7 2.6 31 102-132 74-104 (318)
253 TIGR03131 malonate_mdcH malona 76.6 3.9 8.5E-05 31.8 3.8 31 102-132 66-96 (295)
254 PRK10279 hypothetical protein; 76.3 4.7 0.0001 31.5 4.1 33 102-134 23-55 (300)
255 cd07225 Pat_PNPLA6_PNPLA7 Pata 76.1 5.2 0.00011 31.4 4.3 62 61-133 3-64 (306)
256 PF06309 Torsin: Torsin; Inte 75.3 3.4 7.3E-05 27.5 2.6 20 42-62 49-68 (127)
257 cd01714 ETF_beta The electron 75.0 12 0.00027 27.3 5.7 63 73-143 78-145 (202)
258 cd07207 Pat_ExoU_VipD_like Exo 73.3 7 0.00015 28.1 4.2 32 102-133 17-48 (194)
259 COG1752 RssA Predicted esteras 72.8 6.2 0.00013 31.0 4.0 33 101-133 28-60 (306)
260 cd07210 Pat_hypo_W_succinogene 72.1 8.4 0.00018 28.6 4.4 31 103-133 19-49 (221)
261 TIGR00128 fabD malonyl CoA-acy 71.7 5.6 0.00012 30.8 3.6 31 103-133 73-104 (290)
262 cd07227 Pat_Fungal_NTE1 Fungal 71.6 7.5 0.00016 29.9 4.1 33 101-133 27-59 (269)
263 cd07228 Pat_NTE_like_bacteria 68.0 11 0.00024 26.7 4.1 32 103-134 19-50 (175)
264 cd07209 Pat_hypo_Ecoli_Z1214_l 67.1 11 0.00025 27.8 4.2 33 102-134 16-48 (215)
265 cd07230 Pat_TGL4-5_like Triacy 67.1 5.7 0.00012 32.8 2.8 35 103-137 92-126 (421)
266 PF10605 3HBOH: 3HB-oligomer h 64.2 5.4 0.00012 34.1 2.2 44 202-245 556-606 (690)
267 cd07232 Pat_PLPL Patain-like p 63.9 6 0.00013 32.5 2.4 39 102-140 85-123 (407)
268 cd07229 Pat_TGL3_like Triacylg 62.5 6.8 0.00015 31.8 2.4 39 102-140 101-139 (391)
269 cd07205 Pat_PNPLA6_PNPLA7_NTE1 62.5 18 0.00039 25.5 4.4 31 103-133 19-49 (175)
270 cd07231 Pat_SDP1-like Sugar-De 61.9 8.5 0.00018 30.3 2.7 34 102-135 86-119 (323)
271 COG3933 Transcriptional antite 61.1 75 0.0016 26.5 7.8 73 45-128 109-181 (470)
272 COG1073 Hydrolases of the alph 60.9 0.34 7.4E-06 37.3 -5.1 102 44-146 87-198 (299)
273 cd07208 Pat_hypo_Ecoli_yjju_li 60.1 18 0.00039 27.7 4.3 34 102-135 16-50 (266)
274 PF06792 UPF0261: Uncharacteri 59.4 1E+02 0.0022 25.5 9.9 95 47-143 3-126 (403)
275 TIGR02816 pfaB_fam PfaB family 59.2 13 0.00029 31.8 3.6 31 103-133 255-286 (538)
276 COG4850 Uncharacterized conser 57.8 41 0.00088 26.6 5.6 48 99-146 265-314 (373)
277 cd07224 Pat_like Patatin-like 57.2 23 0.00049 26.6 4.3 33 102-134 17-51 (233)
278 COG3673 Uncharacterized conser 56.7 1E+02 0.0022 24.6 8.1 90 43-132 29-142 (423)
279 cd07206 Pat_TGL3-4-5_SDP1 Tria 52.8 24 0.00052 27.6 3.8 32 106-137 91-122 (298)
280 PF03610 EIIA-man: PTS system 52.2 63 0.0014 21.0 7.9 74 47-132 2-78 (116)
281 PRK06490 glutamine amidotransf 52.2 93 0.002 23.5 6.8 35 96-130 69-103 (239)
282 PF08484 Methyltransf_14: C-me 49.9 79 0.0017 22.2 5.7 48 98-145 53-102 (160)
283 PF00448 SRP54: SRP54-type pro 49.0 1E+02 0.0022 22.4 6.5 70 66-143 76-148 (196)
284 COG0529 CysC Adenylylsulfate k 48.8 1E+02 0.0022 22.3 6.4 60 43-104 20-83 (197)
285 cd07204 Pat_PNPLA_like Patatin 48.2 38 0.00082 25.6 4.3 20 115-134 34-53 (243)
286 cd01819 Patatin_and_cPLA2 Pata 46.5 44 0.00094 23.2 4.1 27 104-130 18-46 (155)
287 PF01583 APS_kinase: Adenylyls 44.8 76 0.0016 22.2 5.0 36 45-80 1-38 (156)
288 cd07218 Pat_iPLA2 Calcium-inde 44.8 45 0.00098 25.3 4.2 20 115-134 33-52 (245)
289 PRK05282 (alpha)-aspartyl dipe 44.7 56 0.0012 24.6 4.6 87 44-130 30-130 (233)
290 KOG2170 ATPase of the AAA+ sup 44.0 21 0.00045 28.0 2.2 19 43-62 107-125 (344)
291 cd07221 Pat_PNPLA3 Patatin-lik 43.8 49 0.0011 25.2 4.3 22 113-134 33-54 (252)
292 COG0279 GmhA Phosphoheptose is 43.7 37 0.0008 23.9 3.2 71 49-123 44-120 (176)
293 PF11713 Peptidase_C80: Peptid 43.6 16 0.00034 25.5 1.5 43 82-124 63-116 (157)
294 KOG2872 Uroporphyrinogen decar 42.4 81 0.0018 24.6 5.0 68 45-120 252-336 (359)
295 cd07220 Pat_PNPLA2 Patatin-lik 41.9 51 0.0011 25.1 4.1 22 113-134 37-58 (249)
296 cd07212 Pat_PNPLA9 Patatin-lik 41.5 61 0.0013 25.7 4.6 19 115-133 35-53 (312)
297 PRK05665 amidotransferase; Pro 41.2 63 0.0014 24.4 4.5 37 94-130 72-108 (240)
298 COG0331 FabD (acyl-carrier-pro 40.1 36 0.00078 26.9 3.1 22 110-131 83-104 (310)
299 PF00326 Peptidase_S9: Prolyl 39.9 59 0.0013 23.7 4.2 61 44-108 143-208 (213)
300 COG3340 PepE Peptidase E [Amin 39.6 1.4E+02 0.003 22.3 5.6 36 45-80 32-70 (224)
301 PF14253 AbiH: Bacteriophage a 39.2 17 0.00038 27.8 1.3 14 111-124 234-247 (270)
302 cd05312 NAD_bind_1_malic_enz N 37.9 60 0.0013 25.2 3.9 81 48-130 27-124 (279)
303 PF02230 Abhydrolase_2: Phosph 36.7 1.3E+02 0.0028 22.1 5.5 57 45-108 155-214 (216)
304 PRK05368 homoserine O-succinyl 36.6 58 0.0013 25.6 3.7 32 101-132 123-154 (302)
305 PF10686 DUF2493: Protein of u 36.4 40 0.00088 19.8 2.3 25 45-72 31-55 (71)
306 PRK04148 hypothetical protein; 36.2 85 0.0018 21.3 4.0 21 112-132 18-38 (134)
307 PF12242 Eno-Rase_NADH_b: NAD( 36.2 59 0.0013 19.5 2.8 24 110-133 38-61 (78)
308 KOG1252 Cystathionine beta-syn 35.7 2.4E+02 0.0051 22.8 7.7 36 109-144 300-336 (362)
309 cd00006 PTS_IIA_man PTS_IIA, P 35.6 1.3E+02 0.0028 19.8 8.0 70 47-128 3-74 (122)
310 cd07222 Pat_PNPLA4 Patatin-lik 35.5 67 0.0014 24.4 3.9 17 115-131 34-50 (246)
311 COG0541 Ffh Signal recognition 35.4 2.7E+02 0.0058 23.4 7.2 49 95-143 197-247 (451)
312 cd01012 YcaC_related YcaC rela 34.8 1.5E+02 0.0033 20.4 5.7 51 101-151 78-128 (157)
313 PF01734 Patatin: Patatin-like 34.6 57 0.0012 23.0 3.4 21 112-132 27-47 (204)
314 PRK07053 glutamine amidotransf 34.2 2E+02 0.0044 21.6 6.9 33 98-130 68-100 (234)
315 COG4822 CbiK Cobalamin biosynt 34.0 2E+02 0.0043 21.5 6.9 13 47-59 140-152 (265)
316 PLN03019 carbonic anhydrase 33.6 81 0.0018 25.1 4.0 30 98-127 201-230 (330)
317 PF05577 Peptidase_S28: Serine 33.4 43 0.00093 27.9 2.8 40 202-245 377-416 (434)
318 TIGR03707 PPK2_P_aer polyphosp 32.8 75 0.0016 23.9 3.7 68 44-123 29-100 (230)
319 TIGR03709 PPK2_rel_1 polyphosp 32.5 76 0.0016 24.5 3.7 66 44-121 54-123 (264)
320 COG1087 GalE UDP-glucose 4-epi 32.5 2E+02 0.0043 22.9 5.8 84 64-148 15-121 (329)
321 TIGR01425 SRP54_euk signal rec 32.4 2.4E+02 0.0051 23.7 6.7 63 72-142 182-246 (429)
322 COG4667 Predicted esterase of 31.8 70 0.0015 24.6 3.3 39 102-141 30-69 (292)
323 COG0426 FpaA Uncharacterized f 31.8 3E+02 0.0064 22.8 7.2 73 47-137 250-332 (388)
324 COG1506 DAP2 Dipeptidyl aminop 31.8 86 0.0019 27.7 4.4 44 44-87 550-598 (620)
325 cd07211 Pat_PNPLA8 Patatin-lik 31.4 64 0.0014 25.4 3.3 17 115-131 44-60 (308)
326 PF13709 DUF4159: Domain of un 31.1 2.2E+02 0.0047 21.0 6.1 37 202-239 54-90 (207)
327 PRK02399 hypothetical protein; 31.0 3.1E+02 0.0068 22.8 9.8 93 49-142 6-127 (406)
328 PF15566 Imm18: Immunity prote 30.7 69 0.0015 17.5 2.3 31 95-125 4-34 (52)
329 COG3621 Patatin [General funct 30.6 1.6E+02 0.0034 23.7 5.0 52 72-134 8-64 (394)
330 COG1092 Predicted SAM-dependen 30.2 2.1E+02 0.0046 23.7 6.0 19 72-90 290-308 (393)
331 cd03131 GATase1_HTS Type 1 glu 29.8 28 0.0006 24.8 1.0 37 97-133 82-118 (175)
332 COG0813 DeoD Purine-nucleoside 29.8 1.2E+02 0.0026 22.6 4.1 39 110-150 54-96 (236)
333 PF00857 Isochorismatase: Isoc 29.7 1E+02 0.0022 21.5 3.9 51 100-150 101-151 (174)
334 cd00431 cysteine_hydrolases Cy 29.2 1.8E+02 0.0039 19.9 5.1 48 101-148 100-147 (161)
335 PF04084 ORC2: Origin recognit 28.9 3.1E+02 0.0067 22.0 8.4 33 93-125 117-150 (326)
336 TIGR03607 patatin-related prot 28.4 1.4E+02 0.003 27.1 5.0 33 99-131 50-85 (739)
337 cd01715 ETF_alpha The electron 28.3 1.7E+02 0.0037 20.5 4.8 53 73-133 53-106 (168)
338 cd01015 CSHase N-carbamoylsarc 28.2 2E+02 0.0043 20.4 5.2 50 100-149 103-152 (179)
339 PF02590 SPOUT_MTase: Predicte 28.2 1E+02 0.0022 21.5 3.5 50 66-124 61-111 (155)
340 COG1576 Uncharacterized conser 28.1 2.1E+02 0.0046 20.0 5.3 56 64-129 59-115 (155)
341 COG3887 Predicted signaling pr 28.0 1.8E+02 0.0039 25.5 5.3 47 99-146 323-377 (655)
342 cd07217 Pat17_PNPLA8_PNPLA9_li 28.0 60 0.0013 26.1 2.7 18 115-132 44-61 (344)
343 KOG3086 Predicted dioxygenase 28.0 1.7E+02 0.0038 22.2 4.7 56 93-148 17-80 (296)
344 cd07213 Pat17_PNPLA8_PNPLA9_li 27.8 60 0.0013 25.3 2.6 19 115-133 37-55 (288)
345 cd00382 beta_CA Carbonic anhyd 27.7 1E+02 0.0022 20.3 3.3 29 98-126 45-73 (119)
346 KOG2316 Predicted ATPase (PP-l 27.1 1.6E+02 0.0035 22.0 4.3 63 66-128 56-120 (277)
347 COG0518 GuaA GMP synthase - Gl 26.9 1.4E+02 0.0031 21.8 4.2 37 94-130 60-96 (198)
348 cd01011 nicotinamidase Nicotin 26.7 2.5E+02 0.0054 20.3 5.7 51 100-150 127-177 (196)
349 PF03490 Varsurf_PPLC: Variant 26.7 79 0.0017 17.0 2.1 27 93-119 6-32 (51)
350 PLN03014 carbonic anhydrase 26.6 1.3E+02 0.0028 24.2 4.1 30 98-127 206-236 (347)
351 PRK14194 bifunctional 5,10-met 26.5 1.3E+02 0.0028 23.8 4.1 34 99-132 143-182 (301)
352 PLN00416 carbonate dehydratase 26.3 1.7E+02 0.0037 22.5 4.6 29 99-127 127-155 (258)
353 PRK14046 malate--CoA ligase su 26.3 98 0.0021 25.5 3.6 39 111-150 118-156 (392)
354 TIGR02813 omega_3_PfaA polyket 26.2 73 0.0016 33.5 3.4 30 102-131 664-693 (2582)
355 PRK00103 rRNA large subunit me 26.1 2.4E+02 0.0051 19.8 5.4 53 65-125 60-112 (157)
356 PRK09065 glutamine amidotransf 26.0 1.1E+02 0.0024 23.1 3.6 34 97-130 72-105 (237)
357 PLN02752 [acyl-carrier protein 26.0 78 0.0017 25.4 3.0 18 115-132 127-144 (343)
358 PF03976 PPK2: Polyphosphate k 25.7 45 0.00097 25.0 1.5 37 45-81 30-68 (228)
359 PF07521 RMMBL: RNA-metabolisi 25.5 1.1E+02 0.0024 15.7 4.4 19 99-117 20-38 (43)
360 KOG1202 Animal-type fatty acid 25.4 94 0.002 30.0 3.5 24 101-124 571-594 (2376)
361 cd01014 nicotinamidase_related 25.3 1.8E+02 0.0038 20.1 4.4 48 101-148 89-136 (155)
362 cd01985 ETF The electron trans 25.2 2.5E+02 0.0055 19.9 5.3 53 73-133 61-114 (181)
363 cd01013 isochorismatase Isocho 25.0 2.1E+02 0.0045 20.9 4.8 51 100-150 131-181 (203)
364 PF02633 Creatininase: Creatin 24.9 2.9E+02 0.0062 20.8 5.7 69 63-132 43-121 (237)
365 PRK14974 cell division protein 24.7 3.8E+02 0.0082 21.7 7.8 63 73-143 223-287 (336)
366 cd00883 beta_CA_cladeA Carboni 24.7 1E+02 0.0022 22.1 3.1 31 99-129 68-98 (182)
367 PRK05579 bifunctional phosphop 24.6 4.1E+02 0.009 22.1 8.5 73 45-119 116-196 (399)
368 PF00862 Sucrose_synth: Sucros 24.3 2.1E+02 0.0046 24.6 5.1 40 94-133 382-423 (550)
369 KOG3179 Predicted glutamine sy 24.3 1.6E+02 0.0035 21.7 3.9 39 93-131 73-111 (245)
370 KOG1752 Glutaredoxin and relat 24.0 2.1E+02 0.0045 18.4 5.1 75 44-134 13-91 (104)
371 cd03379 beta_CA_cladeD Carboni 24.0 1.3E+02 0.0029 20.5 3.5 27 97-123 41-67 (142)
372 PRK07877 hypothetical protein; 23.9 2E+02 0.0044 26.1 5.3 38 106-145 102-139 (722)
373 TIGR02873 spore_ylxY probable 23.6 83 0.0018 24.3 2.6 32 47-79 232-264 (268)
374 cd07219 Pat_PNPLA1 Patatin-lik 23.6 1.4E+02 0.003 24.6 3.8 19 114-132 46-64 (382)
375 PF13207 AAA_17: AAA domain; P 23.1 97 0.0021 19.9 2.6 30 48-80 1-32 (121)
376 PF01118 Semialdhyde_dh: Semia 23.0 1.1E+02 0.0025 19.9 2.9 32 113-145 1-33 (121)
377 KOG2214 Predicted esterase of 22.4 47 0.001 28.1 1.1 32 110-141 200-231 (543)
378 TIGR02683 upstrm_HI1419 probab 22.4 2.1E+02 0.0045 17.8 4.0 31 23-57 49-79 (95)
379 PRK03363 fixB putative electro 22.4 2.5E+02 0.0053 22.4 5.0 53 73-133 50-103 (313)
380 PF07812 TfuA: TfuA-like prote 22.0 1.6E+02 0.0035 19.5 3.3 28 104-131 14-41 (120)
381 COG3946 VirJ Type IV secretory 22.0 4.8E+02 0.01 21.9 6.5 98 46-144 49-154 (456)
382 KOG0781 Signal recognition par 21.9 4.5E+02 0.0097 22.7 6.4 63 73-143 467-538 (587)
383 PRK00131 aroK shikimate kinase 21.8 1.1E+02 0.0024 21.2 2.9 32 45-79 3-36 (175)
384 PLN03006 carbonate dehydratase 21.7 1.2E+02 0.0026 23.9 3.1 29 98-126 158-186 (301)
385 PF03575 Peptidase_S51: Peptid 21.6 55 0.0012 22.6 1.2 13 114-126 70-82 (154)
386 KOG0744 AAA+-type ATPase [Post 21.4 1.4E+02 0.0029 24.1 3.3 34 47-83 178-211 (423)
387 PF00484 Pro_CA: Carbonic anhy 21.2 2.8E+02 0.0061 19.0 4.8 32 96-127 39-70 (153)
388 PLN02925 4-hydroxy-3-methylbut 20.9 3.1E+02 0.0068 24.7 5.6 41 73-118 630-670 (733)
389 PLN02733 phosphatidylcholine-s 20.9 54 0.0012 27.5 1.3 52 205-261 370-421 (440)
390 COG0218 Predicted GTPase [Gene 20.9 3.5E+02 0.0076 19.9 8.0 69 34-116 63-141 (200)
391 PLN02777 photosystem I P subun 20.7 80 0.0017 22.1 1.8 60 83-143 64-123 (167)
392 PF02540 NAD_synthase: NAD syn 20.5 3.9E+02 0.0085 20.3 5.6 47 96-143 3-53 (242)
393 PF00091 Tubulin: Tubulin/FtsZ 20.4 2.8E+02 0.006 20.5 4.8 16 110-125 122-137 (216)
394 PF09825 BPL_N: Biotin-protein 20.4 3.8E+02 0.0083 22.0 5.7 31 48-79 3-37 (367)
395 TIGR02764 spore_ybaN_pdaB poly 20.2 77 0.0017 22.8 1.8 32 47-79 153-188 (191)
396 cd07199 Pat17_PNPLA8_PNPLA9_li 20.1 84 0.0018 23.9 2.1 18 115-132 37-54 (258)
No 1
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=1.6e-37 Score=239.67 Aligned_cols=239 Identities=19% Similarity=0.217 Sum_probs=176.3
Q ss_pred CCceeEEEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCC-------C
Q 024228 19 VGMTQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDR-------P 91 (270)
Q Consensus 19 ~~~~~~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~-------~ 91 (270)
+.++.++++. +|.+++|...|+ ++++|||+||+++++. .|..+++.|+++|+|+++|+||||.|+.+. .
T Consensus 6 ~~~~~~~~~~-~~~~i~y~~~G~--~~~~vlllHG~~~~~~-~w~~~~~~L~~~~~vi~~DlpG~G~S~~~~~~~~~~~~ 81 (294)
T PLN02824 6 PQVETRTWRW-KGYNIRYQRAGT--SGPALVLVHGFGGNAD-HWRKNTPVLAKSHRVYAIDLLGYGYSDKPNPRSAPPNS 81 (294)
T ss_pred CCCCCceEEE-cCeEEEEEEcCC--CCCeEEEECCCCCChh-HHHHHHHHHHhCCeEEEEcCCCCCCCCCCccccccccc
Confidence 4566778888 699999988774 3589999999999999 999999999988999999999999998653 2
Q ss_pred CCChHHHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCC-----chhhhH----hhhhcc
Q 024228 92 DRTASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLT-----ESVSNA----ALERIG 162 (270)
Q Consensus 92 ~~~~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~-----~~~~~~----~~~~~~ 162 (270)
.++++++++++.+++++++.++++|+||||||.+++.+|.++|++|+++|++++..... ...... ......
T Consensus 82 ~~~~~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (294)
T PLN02824 82 FYTFETWGEQLNDFCSDVVGDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQNLLR 161 (294)
T ss_pred cCCHHHHHHHHHHHHHHhcCCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccchhhhHHHHHHHHHHh
Confidence 47899999999999999999999999999999999999999999999999999764211 000000 000000
Q ss_pred ---c-hh----------hhhh----cccc---cHHHHHHH-------------HHhhhhcCCCChhhhhhhhheeeeEEE
Q 024228 163 ---Y-ES----------WVDF----LLPK---TADALKVQ-------------FDIACYKLPTLPAFVYKHILEKIHLLW 208 (270)
Q Consensus 163 ---~-~~----------~~~~----~~~~---~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~P~l~i~ 208 (270)
. .. .... .... ........ ...............+.++.+|+|+|+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~ 241 (294)
T PLN02824 162 ETAVGKAFFKSVATPETVKNILCQCYHDDSAVTDELVEAILRPGLEPGAVDVFLDFISYSGGPLPEELLPAVKCPVLIAW 241 (294)
T ss_pred chhHHHHHHHhhcCHHHHHHHHHHhccChhhccHHHHHHHHhccCCchHHHHHHHHhccccccchHHHHhhcCCCeEEEE
Confidence 0 00 0000 0000 00000000 000000111112344566679999999
Q ss_pred cCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHHhh
Q 024228 209 GENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILASL 262 (270)
Q Consensus 209 g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 262 (270)
|++|.++|.+.++.+.+..+ +.++++++++||+++.|+|+++++.|.+|++++
T Consensus 242 G~~D~~~~~~~~~~~~~~~~-~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 294 (294)
T PLN02824 242 GEKDPWEPVELGRAYANFDA-VEDFIVLPGVGHCPQDEAPELVNPLIESFVARH 294 (294)
T ss_pred ecCCCCCChHHHHHHHhcCC-ccceEEeCCCCCChhhhCHHHHHHHHHHHHhcC
Confidence 99999999999988777665 789999999999999999999999999999753
No 2
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=100.00 E-value=6.4e-37 Score=234.20 Aligned_cols=238 Identities=20% Similarity=0.192 Sum_probs=175.1
Q ss_pred EEEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHHH
Q 024228 24 RTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMA 103 (270)
Q Consensus 24 ~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~ 103 (270)
+++++ +|.+++|+..+..+++++|||+||++++.. .|..+++.|.+.|+|+++|+||||.|+.+...++.+.+++++.
T Consensus 5 ~~~~~-~~~~~~~~~~~~~~~~~plvllHG~~~~~~-~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~ 82 (276)
T TIGR02240 5 RTIDL-DGQSIRTAVRPGKEGLTPLLIFNGIGANLE-LVFPFIEALDPDLEVIAFDVPGVGGSSTPRHPYRFPGLAKLAA 82 (276)
T ss_pred EEecc-CCcEEEEEEecCCCCCCcEEEEeCCCcchH-HHHHHHHHhccCceEEEECCCCCCCCCCCCCcCcHHHHHHHHH
Confidence 45666 788999977543234589999999999999 9999999998889999999999999987666688999999999
Q ss_pred HHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCc--hhhhH---hhhhccc-------hhhhhhcc
Q 024228 104 KGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTE--SVSNA---ALERIGY-------ESWVDFLL 171 (270)
Q Consensus 104 ~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~--~~~~~---~~~~~~~-------~~~~~~~~ 171 (270)
+++++++.++++|+||||||.+++.+|.++|++|+++|+++++..... ..... ....... ........
T Consensus 83 ~~i~~l~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (276)
T TIGR02240 83 RMLDYLDYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPGKPKVLMMMASPRRYIQPSHGIHIAPDIYG 162 (276)
T ss_pred HHHHHhCcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCCchhHHHHhcCchhhhccccccchhhhhcc
Confidence 999999999999999999999999999999999999999998764211 00000 0000000 00000000
Q ss_pred c---ccHHHHHHHHH------------hhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEe
Q 024228 172 P---KTADALKVQFD------------IACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESI 236 (270)
Q Consensus 172 ~---~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~ 236 (270)
. ........... .......+.....+.++.+|+|+++|++|+++|++..+.+.+.++ +.+++++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~v~~~~~~~l~~~~~-~~~~~~i 241 (276)
T TIGR02240 163 GAFRRDPELAMAHASKVRSGGKLGYYWQLFAGLGWTSIHWLHKIQQPTLVLAGDDDPIIPLINMRLLAWRIP-NAELHII 241 (276)
T ss_pred ceeeccchhhhhhhhhcccCCCchHHHHHHHHcCCchhhHhhcCCCCEEEEEeCCCCcCCHHHHHHHHHhCC-CCEEEEE
Confidence 0 00000000000 000000111223355667999999999999999999999999998 8999999
Q ss_pred cCCCcceeecchHhHHHHHHHHHHhhhhh
Q 024228 237 EKAGHLVNLERPFVYNRQLKTILASLVHA 265 (270)
Q Consensus 237 ~~~gH~~~~~~~~~~~~~i~~fl~~~~~~ 265 (270)
++ ||+++.++|+++++.|.+|+++....
T Consensus 242 ~~-gH~~~~e~p~~~~~~i~~fl~~~~~~ 269 (276)
T TIGR02240 242 DD-GHLFLITRAEAVAPIIMKFLAEERQR 269 (276)
T ss_pred cC-CCchhhccHHHHHHHHHHHHHHhhhh
Confidence 85 99999999999999999999987654
No 3
>PRK03592 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=4e-36 Score=232.06 Aligned_cols=239 Identities=17% Similarity=0.181 Sum_probs=171.9
Q ss_pred CceeEEEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHHHH
Q 024228 20 GMTQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQA 99 (270)
Q Consensus 20 ~~~~~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~ 99 (270)
.++...+++ +|.+++|...+. +++|||+||++++.. .|..+++.|++.++|+++|+||||.|+.+...++.+.++
T Consensus 6 ~~~~~~~~~-~g~~i~y~~~G~---g~~vvllHG~~~~~~-~w~~~~~~L~~~~~via~D~~G~G~S~~~~~~~~~~~~a 80 (295)
T PRK03592 6 PGEMRRVEV-LGSRMAYIETGE---GDPIVFLHGNPTSSY-LWRNIIPHLAGLGRCLAPDLIGMGASDKPDIDYTFADHA 80 (295)
T ss_pred CCcceEEEE-CCEEEEEEEeCC---CCEEEEECCCCCCHH-HHHHHHHHHhhCCEEEEEcCCCCCCCCCCCCCCCHHHHH
Confidence 345666777 799999988774 689999999999999 999999999988999999999999999877678999999
Q ss_pred HHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCch--hh---hHhhhhccch----------
Q 024228 100 ECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTES--VS---NAALERIGYE---------- 164 (270)
Q Consensus 100 ~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~--~~---~~~~~~~~~~---------- 164 (270)
+|+.+++++++.++++++|||+||.+|+.+|.++|++|+++|++++....... .. ......+...
T Consensus 81 ~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (295)
T PRK03592 81 RYLDAWFDALGLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDFPPAVRELFQALRSPGEGEEMVLEE 160 (295)
T ss_pred HHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhhcchhHHHHHHHHhCcccccccccch
Confidence 99999999999999999999999999999999999999999999974322110 00 0000000000
Q ss_pred -hhhhhcccc------cHHHHHHHHHh-----------hhhcC----CCC---------hhhhhhhhheeeeEEEcCCCc
Q 024228 165 -SWVDFLLPK------TADALKVQFDI-----------ACYKL----PTL---------PAFVYKHILEKIHLLWGENDK 213 (270)
Q Consensus 165 -~~~~~~~~~------~~~~~~~~~~~-----------~~~~~----~~~---------~~~~~~~~~~P~l~i~g~~D~ 213 (270)
......... .......+... ..... ... ....+.++.+|+|+|+|++|.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~ 240 (295)
T PRK03592 161 NVFIERVLPGSILRPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALVEEYAQWLATSDVPKLLINAEPGA 240 (295)
T ss_pred hhHHhhcccCcccccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccCCCCeEEEeccCCc
Confidence 000000000 00000000000 00000 000 011234456999999999999
Q ss_pred cCCHHHHHHHH-HHhcCCceEEEecCCCcceeecchHhHHHHHHHHHHhhhh
Q 024228 214 IFDMQVARNLK-EQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILASLVH 264 (270)
Q Consensus 214 ~~~~~~~~~~~-~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~ 264 (270)
++++....++. +..+ +.++++++++||+++.++|+++++.|.+|+++...
T Consensus 241 ~~~~~~~~~~~~~~~~-~~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~~~~~ 291 (295)
T PRK03592 241 ILTTGAIRDWCRSWPN-QLEITVFGAGLHFAQEDSPEEIGAAIAAWLRRLRL 291 (295)
T ss_pred ccCcHHHHHHHHHhhh-hcceeeccCcchhhhhcCHHHHHHHHHHHHHHhcc
Confidence 99555554554 4455 89999999999999999999999999999987654
No 4
>PRK00870 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=5.6e-35 Score=226.22 Aligned_cols=237 Identities=16% Similarity=0.145 Sum_probs=167.8
Q ss_pred ceeEEEeecCC-----eEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCC--CC
Q 024228 21 MTQRTIEIEPG-----TILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDR--PD 92 (270)
Q Consensus 21 ~~~~~i~~~~g-----~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~--~~ 92 (270)
+..+++.+. + .+++|...+.. .+|+|||+||++++.. .|..+++.|++. |+|+++|+||||.|+.+. ..
T Consensus 19 ~~~~~~~~~-~~~~~~~~i~y~~~G~~-~~~~lvliHG~~~~~~-~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~~~~ 95 (302)
T PRK00870 19 FAPHYVDVD-DGDGGPLRMHYVDEGPA-DGPPVLLLHGEPSWSY-LYRKMIPILAAAGHRVIAPDLIGFGRSDKPTRRED 95 (302)
T ss_pred CCceeEeec-CCCCceEEEEEEecCCC-CCCEEEEECCCCCchh-hHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCccc
Confidence 355667774 4 67888877653 4689999999999999 999999999865 999999999999998654 34
Q ss_pred CChHHHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCch--h--hhHhhhhcc------
Q 024228 93 RTASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTES--V--SNAALERIG------ 162 (270)
Q Consensus 93 ~~~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~--~--~~~~~~~~~------ 162 (270)
++.+.+++|+.+++++++.++++++||||||.+++.+|.++|++|+++|++++....... . .........
T Consensus 96 ~~~~~~a~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (302)
T PRK00870 96 YTYARHVEWMRSWFEQLDLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGPMPDAFWAWRAFSQYSPVLP 175 (302)
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCccccchHHHhhhhcccccCchhh
Confidence 789999999999999999999999999999999999999999999999999875322110 0 000000000
Q ss_pred chhhhh-hcccc-cHHHHHHHH------------Hhh-hhc-CC-----C-Ch---hhhhhhhheeeeEEEcCCCccCCH
Q 024228 163 YESWVD-FLLPK-TADALKVQF------------DIA-CYK-LP-----T-LP---AFVYKHILEKIHLLWGENDKIFDM 217 (270)
Q Consensus 163 ~~~~~~-~~~~~-~~~~~~~~~------------~~~-~~~-~~-----~-~~---~~~~~~~~~P~l~i~g~~D~~~~~ 217 (270)
...... ..... ......... ... ... .. . .. ...+.++.+|+++|+|++|.++|.
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~ 255 (302)
T PRK00870 176 VGRLVNGGTVRDLSDAVRAAYDAPFPDESYKAGARAFPLLVPTSPDDPAVAANRAAWAVLERWDKPFLTAFSDSDPITGG 255 (302)
T ss_pred HHHHhhccccccCCHHHHHHhhcccCChhhhcchhhhhhcCCCCCCCcchHHHHHHHHhhhcCCCceEEEecCCCCcccC
Confidence 000000 00000 000000000 000 000 00 0 00 012345569999999999999997
Q ss_pred HHHHHHHHHhcCCce---EEEecCCCcceeecchHhHHHHHHHHHHhh
Q 024228 218 QVARNLKEQVGQNAT---MESIEKAGHLVNLERPFVYNRQLKTILASL 262 (270)
Q Consensus 218 ~~~~~~~~~~~~~~~---~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 262 (270)
.. +.+.+.++ +.+ +.+++++||++++++|+++++.|.+|++++
T Consensus 256 ~~-~~~~~~~~-~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 256 GD-AILQKRIP-GAAGQPHPTIKGAGHFLQEDSGEELAEAVLEFIRAT 301 (302)
T ss_pred ch-HHHHhhcc-cccccceeeecCCCccchhhChHHHHHHHHHHHhcC
Confidence 66 78888887 554 889999999999999999999999999764
No 5
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=1.9e-34 Score=227.35 Aligned_cols=238 Identities=24% Similarity=0.283 Sum_probs=166.9
Q ss_pred eEEEeecCCe-EEEEEecCCC---CCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCC-CCCChHH
Q 024228 23 QRTIEIEPGT-ILNIWVPKKT---TKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDR-PDRTASF 97 (270)
Q Consensus 23 ~~~i~~~~g~-~l~~~~~~~~---~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~-~~~~~~~ 97 (270)
.+++.. +|. +++|...|+. +.+|+|||+||++++.. .|..+++.|++.|+|+++|+||||.|+.+. ..++.+.
T Consensus 63 ~~~~~~-~g~~~i~Y~~~G~g~~~~~gp~lvllHG~~~~~~-~w~~~~~~L~~~~~via~Dl~G~G~S~~~~~~~~~~~~ 140 (360)
T PLN02679 63 CKKWKW-KGEYSINYLVKGSPEVTSSGPPVLLVHGFGASIP-HWRRNIGVLAKNYTVYAIDLLGFGASDKPPGFSYTMET 140 (360)
T ss_pred CceEEE-CCceeEEEEEecCcccCCCCCeEEEECCCCCCHH-HHHHHHHHHhcCCEEEEECCCCCCCCCCCCCccccHHH
Confidence 344555 355 8999877752 13589999999999999 999999999888999999999999998764 3578899
Q ss_pred HHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhh-CccccccEEEecccCCCCchh-----hhHh-------h------
Q 024228 98 QAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEM-YPDLVESMVVTCSVMGLTESV-----SNAA-------L------ 158 (270)
Q Consensus 98 ~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~-~p~~v~~~i~~~~~~~~~~~~-----~~~~-------~------ 158 (270)
+++++.+++++++.++++|+||||||.+++.++.. +|++|+++|++++........ .... .
T Consensus 141 ~a~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (360)
T PLN02679 141 WAELILDFLEEVVQKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQ 220 (360)
T ss_pred HHHHHHHHHHHhcCCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccchHHHhhhcchHHHHHHHhhc
Confidence 99999999999999999999999999999988874 799999999999764321100 0000 0
Q ss_pred --------hhccchh-hh----hhccc-cc-HHHHHHH--------------HHhhhhcCCCChhhhhhhhheeeeEEEc
Q 024228 159 --------ERIGYES-WV----DFLLP-KT-ADALKVQ--------------FDIACYKLPTLPAFVYKHILEKIHLLWG 209 (270)
Q Consensus 159 --------~~~~~~~-~~----~~~~~-~~-~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~P~l~i~g 209 (270)
....... .. ..... .. ....... ...............+.++.+|+|+++|
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLii~G 300 (360)
T PLN02679 221 RGIASALFNRVKQRDNLKNILLSVYGNKEAVDDELVEIIRGPADDEGALDAFVSIVTGPPGPNPIKLIPRISLPILVLWG 300 (360)
T ss_pred hhhHHHHHHHhcCHHHHHHHHHHhccCcccCCHHHHHHHHhhccCCChHHHHHHHHhcCCCCCHHHHhhhcCCCEEEEEe
Confidence 0000000 00 00000 00 0000000 0000000011122345566699999999
Q ss_pred CCCccCCHHH-----HHHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHHhhh
Q 024228 210 ENDKIFDMQV-----ARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILASLV 263 (270)
Q Consensus 210 ~~D~~~~~~~-----~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 263 (270)
++|.++|++. .+.+.+.++ +.++++++++||+++.|+|+++++.|.+||++..
T Consensus 301 ~~D~~~p~~~~~~~~~~~l~~~ip-~~~l~~i~~aGH~~~~E~Pe~~~~~I~~FL~~~~ 358 (360)
T PLN02679 301 DQDPFTPLDGPVGKYFSSLPSQLP-NVTLYVLEGVGHCPHDDRPDLVHEKLLPWLAQLP 358 (360)
T ss_pred CCCCCcCchhhHHHHHHhhhccCC-ceEEEEcCCCCCCccccCHHHHHHHHHHHHHhcC
Confidence 9999998763 234555666 8999999999999999999999999999998754
No 6
>PRK03204 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=7.2e-34 Score=217.72 Aligned_cols=233 Identities=15% Similarity=0.200 Sum_probs=165.8
Q ss_pred ceeEEEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCC-CCChHHHH
Q 024228 21 MTQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRP-DRTASFQA 99 (270)
Q Consensus 21 ~~~~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~-~~~~~~~~ 99 (270)
++...+++ +|.+++|...+. +++|||+||++.+.. .|..+.+.|.++|+|+++|+||||.|+.+.. .++.++++
T Consensus 14 ~~~~~~~~-~~~~i~y~~~G~---~~~iv~lHG~~~~~~-~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 88 (286)
T PRK03204 14 FESRWFDS-SRGRIHYIDEGT---GPPILLCHGNPTWSF-LYRDIIVALRDRFRCVAPDYLGFGLSERPSGFGYQIDEHA 88 (286)
T ss_pred ccceEEEc-CCcEEEEEECCC---CCEEEEECCCCccHH-HHHHHHHHHhCCcEEEEECCCCCCCCCCCCccccCHHHHH
Confidence 56677888 688999987764 689999999998887 8999999999889999999999999986543 47889999
Q ss_pred HHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHh----hhh------cc-chhhhh
Q 024228 100 ECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAA----LER------IG-YESWVD 168 (270)
Q Consensus 100 ~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~----~~~------~~-~~~~~~ 168 (270)
+++.+++++++.++++++||||||.+++.++..+|++|+++|++++............ ... .. ......
T Consensus 89 ~~~~~~~~~~~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (286)
T PRK03204 89 RVIGEFVDHLGLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWPADTLAMKAFSRVMSSPPVQYAILRRNFFVE 168 (286)
T ss_pred HHHHHHHHHhCCCCEEEEEECccHHHHHHHHHhChhheeEEEEECccccCCCchhHHHHHHHhccccchhhhhhhhHHHH
Confidence 9999999999999999999999999999999999999999999877542211100000 000 00 000000
Q ss_pred hcc------cccHHHHHHH------------HHh--hhhcCCC-Chhhh---hhh--hheeeeEEEcCCCccCCHH-HHH
Q 024228 169 FLL------PKTADALKVQ------------FDI--ACYKLPT-LPAFV---YKH--ILEKIHLLWGENDKIFDMQ-VAR 221 (270)
Q Consensus 169 ~~~------~~~~~~~~~~------------~~~--~~~~~~~-~~~~~---~~~--~~~P~l~i~g~~D~~~~~~-~~~ 221 (270)
.+. .......... ... ....... ..... ... ..+|+++|+|++|.++++. ..+
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PtliI~G~~D~~~~~~~~~~ 248 (286)
T PRK03204 169 RLIPAGTEHRPSSAVMAHYRAVQPNAAARRGVAEMPKQILAARPLLARLAREVPATLGTKPTLLVWGMKDVAFRPKTILP 248 (286)
T ss_pred HhccccccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHhcchhhHHHHHhhhhhhhhcCCCCeEEEecCCCcccCcHHHHH
Confidence 000 0000000000 000 0000000 00000 000 1599999999999988654 568
Q ss_pred HHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHH
Q 024228 222 NLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTIL 259 (270)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 259 (270)
.+.+.++ +.++++++++||++++|+|+++++.|.+||
T Consensus 249 ~~~~~ip-~~~~~~i~~aGH~~~~e~Pe~~~~~i~~~~ 285 (286)
T PRK03204 249 RLRATFP-DHVLVELPNAKHFIQEDAPDRIAAAIIERF 285 (286)
T ss_pred HHHHhcC-CCeEEEcCCCcccccccCHHHHHHHHHHhc
Confidence 8888888 899999999999999999999999999997
No 7
>PLN02965 Probable pheophorbidase
Probab=100.00 E-value=5.9e-34 Score=215.28 Aligned_cols=215 Identities=17% Similarity=0.116 Sum_probs=155.4
Q ss_pred ceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCC-CCChHHHHHHHHHHHHHhCC-CceEEEEEchh
Q 024228 46 HAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRP-DRTASFQAECMAKGLRKLGV-EKCTLVGVSYG 122 (270)
Q Consensus 46 ~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~-~~~~~~~~~~~~~~l~~~~~-~~~~l~G~S~G 122 (270)
.+|||+||++.+.. .|..+++.|.+. |+|+++|+||||.|+.... .++.+.+++|+.++++.++. ++++|+|||||
T Consensus 4 ~~vvllHG~~~~~~-~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhSmG 82 (255)
T PLN02965 4 IHFVFVHGASHGAW-CWYKLATLLDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDLPPDHKVILVGHSIG 82 (255)
T ss_pred eEEEEECCCCCCcC-cHHHHHHHHhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhcCCCCCEEEEecCcc
Confidence 35999999999998 999999999655 9999999999999986543 57899999999999999987 49999999999
Q ss_pred HHHHHHHHhhCccccccEEEecccCCCCchh-hhHh---hhh----ccc--hh--------------hh-hhc-ccccHH
Q 024228 123 GMVGFKMAEMYPDLVESMVVTCSVMGLTESV-SNAA---LER----IGY--ES--------------WV-DFL-LPKTAD 176 (270)
Q Consensus 123 g~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~-~~~~---~~~----~~~--~~--------------~~-~~~-~~~~~~ 176 (270)
|.+++.+|.++|++|+++|++++........ .... ... ... .. .. ... ......
T Consensus 83 G~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (255)
T PLN02965 83 GGSVTEALCKFTDKISMAIYVAAAMVKPGSIISPRLKNVMEGTEKIWDYTFGEGPDKPPTGIMMKPEFVRHYYYNQSPLE 162 (255)
T ss_pred hHHHHHHHHhCchheeEEEEEccccCCCCCCccHHHHhhhhccccceeeeeccCCCCCcchhhcCHHHHHHHHhcCCCHH
Confidence 9999999999999999999999863211100 0000 000 000 00 00 000 000000
Q ss_pred HHHHHHHhhhhcCCCC----h---hhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchH
Q 024228 177 ALKVQFDIACYKLPTL----P---AFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPF 249 (270)
Q Consensus 177 ~~~~~~~~~~~~~~~~----~---~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~ 249 (270)
... ............ . ......+.+|+++++|++|..+|++..+.+.+.++ ++++++++++||+++.|+|+
T Consensus 163 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~~-~a~~~~i~~~GH~~~~e~p~ 240 (255)
T PLN02965 163 DYT-LSSKLLRPAPVRAFQDLDKLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENWP-PAQTYVLEDSDHSAFFSVPT 240 (255)
T ss_pred HHH-HHHHhcCCCCCcchhhhhhccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhCC-cceEEEecCCCCchhhcCHH
Confidence 000 000000000000 0 11223456999999999999999999999999998 89999999999999999999
Q ss_pred hHHHHHHHHHHhhh
Q 024228 250 VYNRQLKTILASLV 263 (270)
Q Consensus 250 ~~~~~i~~fl~~~~ 263 (270)
++++.|.+|++.+.
T Consensus 241 ~v~~~l~~~~~~~~ 254 (255)
T PLN02965 241 TLFQYLLQAVSSLQ 254 (255)
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999988753
No 8
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=100.00 E-value=6.9e-34 Score=209.73 Aligned_cols=243 Identities=21% Similarity=0.324 Sum_probs=177.1
Q ss_pred ccCCceeEEEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCC--CC
Q 024228 17 KLVGMTQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRP--DR 93 (270)
Q Consensus 17 ~~~~~~~~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~--~~ 93 (270)
...+++..+++. +|.+++|.+.+. .++|.|+++||++.... .|+.+...|+.. |+|+++|+||+|.|+.+.. .+
T Consensus 18 ~~~~~~hk~~~~-~gI~~h~~e~g~-~~gP~illlHGfPe~wy-swr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Y 94 (322)
T KOG4178|consen 18 NLSAISHKFVTY-KGIRLHYVEGGP-GDGPIVLLLHGFPESWY-SWRHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEY 94 (322)
T ss_pred ChhhcceeeEEE-ccEEEEEEeecC-CCCCEEEEEccCCccch-hhhhhhhhhhhcceEEEecCCCCCCCCCCCCCccee
Confidence 445678888888 589999887765 67899999999999999 999999999999 9999999999999998775 49
Q ss_pred ChHHHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhh-------------hh
Q 024228 94 TASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAAL-------------ER 160 (270)
Q Consensus 94 ~~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~-------------~~ 160 (270)
+...++.|+..++++++.++++++||+|||.+|+.+|..+|++|+++|.++.....+........ +.
T Consensus 95 t~~~l~~di~~lld~Lg~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~~p~~~~~~~~~~~f~~~~y~~~fQ~ 174 (322)
T KOG4178|consen 95 TIDELVGDIVALLDHLGLKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFPNPKLKPLDSSKAIFGKSYYICLFQE 174 (322)
T ss_pred eHHHHHHHHHHHHHHhccceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCCCcccchhhhhccccCccceeEeccc
Confidence 99999999999999999999999999999999999999999999999999877651110000000 00
Q ss_pred c----------cchhhhhh----------ccc---------ccHHHHHHHHHhh----------hhc---CCC-Chhhhh
Q 024228 161 I----------GYESWVDF----------LLP---------KTADALKVQFDIA----------CYK---LPT-LPAFVY 197 (270)
Q Consensus 161 ~----------~~~~~~~~----------~~~---------~~~~~~~~~~~~~----------~~~---~~~-~~~~~~ 197 (270)
. ........ ..+ .....++...... .++ ..| ......
T Consensus 175 ~~~~E~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~~~g~~gplNyyrn~~r~w~a~~~~~ 254 (322)
T KOG4178|consen 175 PGKPETELSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQIDGFTGPLNYYRNFRRNWEAAPWAL 254 (322)
T ss_pred cCcchhhhccchhHHhHHhhhccccCCccccCCCCCCccchhhHHHHHHHHhccccccccccchhhHHHhhCchhccccc
Confidence 0 00000000 000 0001111000000 000 011 112334
Q ss_pred hhhheeeeEEEcCCCccCCHH-HHHHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHHhh
Q 024228 198 KHILEKIHLLWGENDKIFDMQ-VARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILASL 262 (270)
Q Consensus 198 ~~~~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 262 (270)
.++.+|+++++|++|.+.+.. ..+.+.+.++...+.++++|+||+.+.|+|+++++.|.+|+++.
T Consensus 255 ~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~l~~~vv~~~~gH~vqqe~p~~v~~~i~~f~~~~ 320 (322)
T KOG4178|consen 255 AKITIPVLFIWGDLDPVLPYPIFGELYRKDVPRLTERVVIEGIGHFVQQEKPQEVNQAILGFINSF 320 (322)
T ss_pred cccccceEEEEecCcccccchhHHHHHHHhhccccceEEecCCcccccccCHHHHHHHHHHHHHhh
Confidence 455599999999999998766 44555555663348899999999999999999999999999875
No 9
>PLN02578 hydrolase
Probab=100.00 E-value=2.7e-33 Score=220.60 Aligned_cols=229 Identities=22% Similarity=0.302 Sum_probs=168.8
Q ss_pred EEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHHHH
Q 024228 25 TIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAK 104 (270)
Q Consensus 25 ~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~ 104 (270)
.+.. +|.+++|...++ +++||++||++++.. .|..+++.|+++|+|+++|+||||.|+.+...++.+.+++++.+
T Consensus 70 ~~~~-~~~~i~Y~~~g~---g~~vvliHG~~~~~~-~w~~~~~~l~~~~~v~~~D~~G~G~S~~~~~~~~~~~~a~~l~~ 144 (354)
T PLN02578 70 FWTW-RGHKIHYVVQGE---GLPIVLIHGFGASAF-HWRYNIPELAKKYKVYALDLLGFGWSDKALIEYDAMVWRDQVAD 144 (354)
T ss_pred EEEE-CCEEEEEEEcCC---CCeEEEECCCCCCHH-HHHHHHHHHhcCCEEEEECCCCCCCCCCcccccCHHHHHHHHHH
Confidence 3444 588899987764 688999999999988 99999999998899999999999999987777899999999999
Q ss_pred HHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhh-------------hH-hhhhc--cchh---
Q 024228 105 GLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVS-------------NA-ALERI--GYES--- 165 (270)
Q Consensus 105 ~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~-------------~~-~~~~~--~~~~--- 165 (270)
+++.+..++++++|||+||.+++.+|.++|++|+++|++++......... .. ..... ....
T Consensus 145 ~i~~~~~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (354)
T PLN02578 145 FVKEVVKEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPLKEWFQRVVL 224 (354)
T ss_pred HHHHhccCCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCccccccccccccccccccchhhHHHhHHHHHHHHHHHH
Confidence 99999889999999999999999999999999999999987643211000 00 00000 0000
Q ss_pred ------------h---hh-hccc-c------------------cHHHHHHHHHhhhh-cCCCChhhhhhhhheeeeEEEc
Q 024228 166 ------------W---VD-FLLP-K------------------TADALKVQFDIACY-KLPTLPAFVYKHILEKIHLLWG 209 (270)
Q Consensus 166 ------------~---~~-~~~~-~------------------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~P~l~i~g 209 (270)
. .. .... . ....+......... .........+.++.+|+++|+|
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G 304 (354)
T PLN02578 225 GFLFWQAKQPSRIESVLKSVYKDKSNVDDYLVESITEPAADPNAGEVYYRLMSRFLFNQSRYTLDSLLSKLSCPLLLLWG 304 (354)
T ss_pred HHHHHHhcCHHHHHHHHHHhcCCcccCCHHHHHHHHhcccCCchHHHHHHHHHHHhcCCCCCCHHHHhhcCCCCEEEEEe
Confidence 0 00 0000 0 00000000000000 0011123345566799999999
Q ss_pred CCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHH
Q 024228 210 ENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILA 260 (270)
Q Consensus 210 ~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 260 (270)
++|.++|.+.++.+.+.++ +.+++++ ++||+++.|+|+++++.|.+|++
T Consensus 305 ~~D~~v~~~~~~~l~~~~p-~a~l~~i-~~GH~~~~e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 305 DLDPWVGPAKAEKIKAFYP-DTTLVNL-QAGHCPHDEVPEQVNKALLEWLS 353 (354)
T ss_pred CCCCCCCHHHHHHHHHhCC-CCEEEEe-CCCCCccccCHHHHHHHHHHHHh
Confidence 9999999999999999987 8899999 58999999999999999999986
No 10
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=100.00 E-value=2.4e-33 Score=215.15 Aligned_cols=234 Identities=17% Similarity=0.114 Sum_probs=169.8
Q ss_pred eEEEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCC-CCChHHHHHH
Q 024228 23 QRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRP-DRTASFQAEC 101 (270)
Q Consensus 23 ~~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~-~~~~~~~~~~ 101 (270)
.+++++ +|.+++|...+. .++++||++||++++.. .|..+.+.|++.|+|+++|+||||.|+.+.. .++.+.+++|
T Consensus 8 ~~~~~~-~~~~~~~~~~g~-~~~~~vv~~hG~~~~~~-~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 84 (278)
T TIGR03056 8 SRRVTV-GPFHWHVQDMGP-TAGPLLLLLHGTGASTH-SWRDLMPPLARSFRVVAPDLPGHGFTRAPFRFRFTLPSMAED 84 (278)
T ss_pred cceeeE-CCEEEEEEecCC-CCCCeEEEEcCCCCCHH-HHHHHHHHHhhCcEEEeecCCCCCCCCCccccCCCHHHHHHH
Confidence 345556 799999987765 34689999999999999 9999999998889999999999999987655 5899999999
Q ss_pred HHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhh-------hHhhhh--cc----------
Q 024228 102 MAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVS-------NAALER--IG---------- 162 (270)
Q Consensus 102 ~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~-------~~~~~~--~~---------- 162 (270)
+.+++++++.++++|+||||||.+++.+|.++|++++++|++++......... ...... ..
T Consensus 85 l~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (278)
T TIGR03056 85 LSALCAAEGLSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMAGTLFPYMARVLACNPFTPPMMSRGAAD 164 (278)
T ss_pred HHHHHHHcCCCCceEEEECccHHHHHHHHHhCCcccceEEEEcCcccccccccccccchhhHhhhhcccchHHHHhhccc
Confidence 99999999988999999999999999999999999999999987543211000 000000 00
Q ss_pred chhhhhhc-------ccccHHHHHHHHHh-------hhhcCCCC---hhhhhhhhheeeeEEEcCCCccCCHHHHHHHHH
Q 024228 163 YESWVDFL-------LPKTADALKVQFDI-------ACYKLPTL---PAFVYKHILEKIHLLWGENDKIFDMQVARNLKE 225 (270)
Q Consensus 163 ~~~~~~~~-------~~~~~~~~~~~~~~-------~~~~~~~~---~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~ 225 (270)
........ .............. ......+. ....+.++.+|+++++|++|.++|++..+.+.+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~g~~D~~vp~~~~~~~~~ 244 (278)
T TIGR03056 165 QQRVERLIRDTGSLLDKAGMTYYGRLIRSPAHVDGALSMMAQWDLAPLNRDLPRITIPLHLIAGEEDKAVPPDESKRAAT 244 (278)
T ss_pred CcchhHHhhccccccccchhhHHHHhhcCchhhhHHHHHhhcccccchhhhcccCCCCEEEEEeCCCcccCHHHHHHHHH
Confidence 00000000 00000000000000 00000000 012234456899999999999999999999998
Q ss_pred HhcCCceEEEecCCCcceeecchHhHHHHHHHHHH
Q 024228 226 QVGQNATMESIEKAGHLVNLERPFVYNRQLKTILA 260 (270)
Q Consensus 226 ~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 260 (270)
.++ ++++++++++||+++.+.|+++++.|.+|++
T Consensus 245 ~~~-~~~~~~~~~~gH~~~~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 245 RVP-TATLHVVPGGGHLVHEEQADGVVGLILQAAE 278 (278)
T ss_pred hcc-CCeEEEECCCCCcccccCHHHHHHHHHHHhC
Confidence 887 8999999999999999999999999999984
No 11
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=100.00 E-value=6.2e-34 Score=224.22 Aligned_cols=242 Identities=17% Similarity=0.166 Sum_probs=167.2
Q ss_pred eeEEEeecCCeEEEEEecCCC--CCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCC-CChHH
Q 024228 22 TQRTIEIEPGTILNIWVPKKT--TKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPD-RTASF 97 (270)
Q Consensus 22 ~~~~i~~~~g~~l~~~~~~~~--~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~-~~~~~ 97 (270)
+..++..++|.++++....+. +.+++|||+||++++....|..+++.|++. |+|+++|+||||.|+..... .+.+.
T Consensus 62 ~~~~~~~~~g~~l~~~~~~p~~~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~ 141 (349)
T PLN02385 62 EESYEVNSRGVEIFSKSWLPENSRPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLHGYIPSFDD 141 (349)
T ss_pred eeeeEEcCCCCEEEEEEEecCCCCCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCcCCHHH
Confidence 344555668999988665442 457899999999988662468889999876 99999999999999865433 58889
Q ss_pred HHHHHHHHHHHhCC------CceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchh-----hhHhh---hhccc
Q 024228 98 QAECMAKGLRKLGV------EKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESV-----SNAAL---ERIGY 163 (270)
Q Consensus 98 ~~~~~~~~l~~~~~------~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~-----~~~~~---~~~~~ 163 (270)
+++|+.++++.+.. .+++|+||||||.+++.++.++|++++++|+++|........ ..... .....
T Consensus 142 ~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~p 221 (349)
T PLN02385 142 LVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPPPLVLQILILLANLLP 221 (349)
T ss_pred HHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccccccccccCchHHHHHHHHHHHHCC
Confidence 99999999988753 279999999999999999999999999999999865432111 00000 00000
Q ss_pred -------hhhhhhcccccHH-HHHHHHHhhhhc-------------CCCChhhhhhhhheeeeEEEcCCCccCCHHHHHH
Q 024228 164 -------ESWVDFLLPKTAD-ALKVQFDIACYK-------------LPTLPAFVYKHILEKIHLLWGENDKIFDMQVARN 222 (270)
Q Consensus 164 -------~~~~~~~~~~~~~-~~~~~~~~~~~~-------------~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~ 222 (270)
............. .... .....+. ........+.++.+|+|+++|++|.++|++.++.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~i~~P~Lii~G~~D~vv~~~~~~~ 300 (349)
T PLN02385 222 KAKLVPQKDLAELAFRDLKKRKMAE-YNVIAYKDKPRLRTAVELLRTTQEIEMQLEEVSLPLLILHGEADKVTDPSVSKF 300 (349)
T ss_pred CceecCCCccccccccCHHHHHHhh-cCcceeCCCcchHHHHHHHHHHHHHHHhcccCCCCEEEEEeCCCCccChHHHHH
Confidence 0000000000000 0000 0000000 0000112234456999999999999999999999
Q ss_pred HHHHhc-CCceEEEecCCCcceeecchHh----HHHHHHHHHHhhhh
Q 024228 223 LKEQVG-QNATMESIEKAGHLVNLERPFV----YNRQLKTILASLVH 264 (270)
Q Consensus 223 ~~~~~~-~~~~~~~~~~~gH~~~~~~~~~----~~~~i~~fl~~~~~ 264 (270)
+++.++ ++.++++++++||.++.++|++ +.+.|.+||+++..
T Consensus 301 l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~~~ 347 (349)
T PLN02385 301 LYEKASSSDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSHST 347 (349)
T ss_pred HHHHcCCCCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHHhcc
Confidence 998875 3689999999999999888876 78889999987753
No 12
>PRK10349 carboxylesterase BioH; Provisional
Probab=100.00 E-value=1.1e-33 Score=214.22 Aligned_cols=219 Identities=17% Similarity=0.193 Sum_probs=152.1
Q ss_pred EEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCc
Q 024228 34 LNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEK 113 (270)
Q Consensus 34 l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~ 113 (270)
++|...|. +.|+|||+||+++++. .|..+.+.|.++|+|+++|+||||.|+... .++.+++++++. ++..++
T Consensus 4 ~~y~~~G~--g~~~ivllHG~~~~~~-~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~-~~~~~~~~~~l~----~~~~~~ 75 (256)
T PRK10349 4 IWWQTKGQ--GNVHLVLLHGWGLNAE-VWRCIDEELSSHFTLHLVDLPGFGRSRGFG-ALSLADMAEAVL----QQAPDK 75 (256)
T ss_pred cchhhcCC--CCCeEEEECCCCCChh-HHHHHHHHHhcCCEEEEecCCCCCCCCCCC-CCCHHHHHHHHH----hcCCCC
Confidence 45555554 3357999999999999 999999999988999999999999998543 466666666654 356689
Q ss_pred eEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCch-----hh----hHhhhhcc--chhhh-hh-----cccccH-
Q 024228 114 CTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTES-----VS----NAALERIG--YESWV-DF-----LLPKTA- 175 (270)
Q Consensus 114 ~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~-----~~----~~~~~~~~--~~~~~-~~-----~~~~~~- 175 (270)
++++||||||.+|+.+|.++|++|+++|++++.+..... .. ........ ..... .. ......
T Consensus 76 ~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (256)
T PRK10349 76 AIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLALQTMGTETAR 155 (256)
T ss_pred eEEEEECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHHHHHHHHHHHHccCchHH
Confidence 999999999999999999999999999999875432110 00 00000000 00000 00 000000
Q ss_pred HHHHHHHHhh---------------hhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCC
Q 024228 176 DALKVQFDIA---------------CYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAG 240 (270)
Q Consensus 176 ~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~g 240 (270)
.......... ...........+.++.+|+|+++|++|.++|.+.++.+.+.++ ++++++++++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~i~-~~~~~~i~~~g 234 (256)
T PRK10349 156 QDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWP-HSESYIFAKAA 234 (256)
T ss_pred HHHHHHHHHhhccCCCcHHHHHHHHHHHHhCccHHHHhhcCCCeEEEecCCCccCCHHHHHHHHHhCC-CCeEEEeCCCC
Confidence 0000000000 0000111223445566999999999999999999999999887 99999999999
Q ss_pred cceeecchHhHHHHHHHHHHh
Q 024228 241 HLVNLERPFVYNRQLKTILAS 261 (270)
Q Consensus 241 H~~~~~~~~~~~~~i~~fl~~ 261 (270)
|++++|+|+++++.+.+|-++
T Consensus 235 H~~~~e~p~~f~~~l~~~~~~ 255 (256)
T PRK10349 235 HAPFISHPAEFCHLLVALKQR 255 (256)
T ss_pred CCccccCHHHHHHHHHHHhcc
Confidence 999999999999999998653
No 13
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=100.00 E-value=8.5e-33 Score=220.91 Aligned_cols=237 Identities=16% Similarity=0.239 Sum_probs=166.8
Q ss_pred eeEEEeecCCeEEEEEecCCCC--CCceEEEeCCCCCcccccHHH-HHHHhh----ccceEEeecCCCCCCCCCCC-CCC
Q 024228 22 TQRTIEIEPGTILNIWVPKKTT--KKHAVVLLHPFGFDGILTWQF-QVLALA----KTYEVYVPDFLFFGSSVTDR-PDR 93 (270)
Q Consensus 22 ~~~~i~~~~g~~l~~~~~~~~~--~~~~vv~~hG~~~~~~~~~~~-~~~~l~----~~~~v~~~d~~g~G~s~~~~-~~~ 93 (270)
...++.+ +|.+++|...++.. .+++|||+||++++.. .|.. +++.|. +.|+|+++|+||||.|+.+. ..+
T Consensus 177 ~~~~~~~-~~~~l~~~~~gp~~~~~k~~VVLlHG~~~s~~-~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~~y 254 (481)
T PLN03087 177 CTSWLSS-SNESLFVHVQQPKDNKAKEDVLFIHGFISSSA-FWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADSLY 254 (481)
T ss_pred eeeeEee-CCeEEEEEEecCCCCCCCCeEEEECCCCccHH-HHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCCcC
Confidence 4455556 57899998877643 3689999999999998 8985 446665 35999999999999998654 347
Q ss_pred ChHHHHHHHH-HHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhh---hHhhhhc--------
Q 024228 94 TASFQAECMA-KGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVS---NAALERI-------- 161 (270)
Q Consensus 94 ~~~~~~~~~~-~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~---~~~~~~~-------- 161 (270)
+.+++++++. .+++.++.++++++||||||.+++.+|.++|++|+++|+++++........ .......
T Consensus 255 tl~~~a~~l~~~ll~~lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (481)
T PLN03087 255 TLREHLEMIERSVLERYKVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYPVPKGVQATQYVMRKVAPRRVWPP 334 (481)
T ss_pred CHHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCccccccchhHHHHHHHHhcccccCCc
Confidence 8999999994 899999999999999999999999999999999999999997643221110 0000000
Q ss_pred -cchh----hh----hhc------ccccHHH---------HHHHHHhh----------------hhcCC----CChhhhh
Q 024228 162 -GYES----WV----DFL------LPKTADA---------LKVQFDIA----------------CYKLP----TLPAFVY 197 (270)
Q Consensus 162 -~~~~----~~----~~~------~~~~~~~---------~~~~~~~~----------------~~~~~----~~~~~~~ 197 (270)
.... +. ... ....... ........ ..... .......
T Consensus 335 ~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~l~~l~ 414 (481)
T PLN03087 335 IAFGASVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLHNIICGSGSKLDGYLDHVR 414 (481)
T ss_pred cccchhHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHHHHHhchhhhhhhHHHHHH
Confidence 0000 00 000 0000000 00000000 00000 0001122
Q ss_pred hhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceee-cchHhHHHHHHHHHHh
Q 024228 198 KHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNL-ERPFVYNRQLKTILAS 261 (270)
Q Consensus 198 ~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl~~ 261 (270)
.++.+|+|+++|++|.++|++..+.+++.++ ++++++++++||++++ ++|+++++.|.+|++.
T Consensus 415 ~~I~vPtLII~Ge~D~ivP~~~~~~la~~iP-~a~l~vI~~aGH~~~v~e~p~~fa~~L~~F~~~ 478 (481)
T PLN03087 415 DQLKCDVAIFHGGDDELIPVECSYAVKAKVP-RARVKVIDDKDHITIVVGRQKEFARELEEIWRR 478 (481)
T ss_pred HhCCCCEEEEEECCCCCCCHHHHHHHHHhCC-CCEEEEeCCCCCcchhhcCHHHHHHHHHHHhhc
Confidence 2466999999999999999999999999998 9999999999999986 9999999999999864
No 14
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=100.00 E-value=9.4e-33 Score=212.24 Aligned_cols=225 Identities=19% Similarity=0.211 Sum_probs=156.5
Q ss_pred CeEEEEEecCCCCCCceEEEeCCCCCcccccHHHH---HHHhhcc-ceEEeecCCCCCCCCCCCCC-CChHHHHHHHHHH
Q 024228 31 GTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQ---VLALAKT-YEVYVPDFLFFGSSVTDRPD-RTASFQAECMAKG 105 (270)
Q Consensus 31 g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~---~~~l~~~-~~v~~~d~~g~G~s~~~~~~-~~~~~~~~~~~~~ 105 (270)
|..++|...++ +|+||++||++.+.. .|..+ +..+.+. |+|+++|+||||.|+..... .....+++++.++
T Consensus 19 ~~~~~y~~~g~---~~~ivllHG~~~~~~-~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~ 94 (282)
T TIGR03343 19 NFRIHYNEAGN---GEAVIMLHGGGPGAG-GWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGL 94 (282)
T ss_pred ceeEEEEecCC---CCeEEEECCCCCchh-hHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcccccchhHHHHHHH
Confidence 45688877664 678999999998877 77543 3445444 99999999999999865422 1222468899999
Q ss_pred HHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCch-------hhhHhhhhcc---chh---hhhh--c
Q 024228 106 LRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTES-------VSNAALERIG---YES---WVDF--L 170 (270)
Q Consensus 106 l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~-------~~~~~~~~~~---~~~---~~~~--~ 170 (270)
++.++.++++++||||||.+++.+|.++|++++++|++++....... .......... ... .... .
T Consensus 95 l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (282)
T TIGR03343 95 MDALDIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEPSYETLKQMLNVFLF 174 (282)
T ss_pred HHHcCCCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHHHHHHHHHhcCCCHHHHHHHHhhCcc
Confidence 99999999999999999999999999999999999999875321100 0000000000 000 0000 0
Q ss_pred cccc----------------HHHHHHHHHhhhh--cCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCce
Q 024228 171 LPKT----------------ADALKVQFDIACY--KLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNAT 232 (270)
Q Consensus 171 ~~~~----------------~~~~~~~~~~~~~--~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~ 232 (270)
.+.. ............. ...+.....+.++.+|+|+++|++|.+++++.++.+++.++ +++
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlli~G~~D~~v~~~~~~~~~~~~~-~~~ 253 (282)
T TIGR03343 175 DQSLITEELLQGRWENIQRQPEHLKNFLISSQKAPLSTWDVTARLGEIKAKTLVTWGRDDRFVPLDHGLKLLWNMP-DAQ 253 (282)
T ss_pred CcccCcHHHHHhHHHHhhcCHHHHHHHHHhccccccccchHHHHHhhCCCCEEEEEccCCCcCCchhHHHHHHhCC-CCE
Confidence 0000 0000000000000 00111233456677999999999999999999999999998 999
Q ss_pred EEEecCCCcceeecchHhHHHHHHHHHH
Q 024228 233 MESIEKAGHLVNLERPFVYNRQLKTILA 260 (270)
Q Consensus 233 ~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 260 (270)
+++++++||+++.|+|+.+.+.|.+||+
T Consensus 254 ~~~i~~agH~~~~e~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 254 LHVFSRCGHWAQWEHADAFNRLVIDFLR 281 (282)
T ss_pred EEEeCCCCcCCcccCHHHHHHHHHHHhh
Confidence 9999999999999999999999999996
No 15
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=100.00 E-value=1.5e-32 Score=215.62 Aligned_cols=233 Identities=17% Similarity=0.180 Sum_probs=167.9
Q ss_pred EEEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCC----CCChHHHH
Q 024228 24 RTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRP----DRTASFQA 99 (270)
Q Consensus 24 ~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~----~~~~~~~~ 99 (270)
......+|.+++|...++ .++++|||+||++++.. .|+.+++.|++.|+|+++|+||||.|+.+.. .++.+.++
T Consensus 107 ~~~~~~~~~~~~y~~~G~-~~~~~ivllHG~~~~~~-~w~~~~~~L~~~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a 184 (383)
T PLN03084 107 QSQASSDLFRWFCVESGS-NNNPPVLLIHGFPSQAY-SYRKVLPVLSKNYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYV 184 (383)
T ss_pred eeEEcCCceEEEEEecCC-CCCCeEEEECCCCCCHH-HHHHHHHHHhcCCEEEEECCCCCCCCCCCcccccccCCHHHHH
Confidence 333345889999988775 34689999999999999 9999999998889999999999999987653 47999999
Q ss_pred HHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCch-hhhHh--h-h----hc----cchhhh
Q 024228 100 ECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTES-VSNAA--L-E----RI----GYESWV 167 (270)
Q Consensus 100 ~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~-~~~~~--~-~----~~----~~~~~~ 167 (270)
+++.+++++++.++++|+|||+||.+++.+|.++|++|+++|++++....... ..... . . .. ......
T Consensus 185 ~~l~~~i~~l~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~~~p~~l~~~~~~l~~~~~~~~~~~~~~ 264 (383)
T PLN03084 185 SSLESLIDELKSDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHAKLPSTLSEFSNFLLGEIFSQDPLRASD 264 (383)
T ss_pred HHHHHHHHHhCCCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCccccccchHHHHHHHHHHhhhhhhcchHHHHh
Confidence 99999999999999999999999999999999999999999999987532110 00000 0 0 00 000000
Q ss_pred hhcc---cc--cHHH-----------------HHHHHHhhhhcCCCChhhhh-----hhhheeeeEEEcCCCccCCHHHH
Q 024228 168 DFLL---PK--TADA-----------------LKVQFDIACYKLPTLPAFVY-----KHILEKIHLLWGENDKIFDMQVA 220 (270)
Q Consensus 168 ~~~~---~~--~~~~-----------------~~~~~~~~~~~~~~~~~~~~-----~~~~~P~l~i~g~~D~~~~~~~~ 220 (270)
..+. .. .... .................... ..+.+|+++++|++|.+++.+..
T Consensus 265 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~~l~~~~~~l~~~l~~~~i~vPvLiI~G~~D~~v~~~~~ 344 (383)
T PLN03084 265 KALTSCGPYAMKEDDAMVYRRPYLTSGSSGFALNAISRSMKKELKKYIEEMRSILTDKNWKTPITVCWGLRDRWLNYDGV 344 (383)
T ss_pred hhhcccCccCCCHHHHHHHhccccCCcchHHHHHHHHHHhhcccchhhHHHHhhhccccCCCCEEEEeeCCCCCcCHHHH
Confidence 0000 00 0000 00000000000000000000 23468999999999999999988
Q ss_pred HHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHH
Q 024228 221 RNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILA 260 (270)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 260 (270)
+.+++. . +.++++++++||+++.|+|+++++.|.+||.
T Consensus 345 ~~~a~~-~-~a~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl~ 382 (383)
T PLN03084 345 EDFCKS-S-QHKLIELPMAGHHVQEDCGEELGGIISGILS 382 (383)
T ss_pred HHHHHh-c-CCeEEEECCCCCCcchhCHHHHHHHHHHHhh
Confidence 888876 3 7899999999999999999999999999986
No 16
>PRK10673 acyl-CoA esterase; Provisional
Probab=100.00 E-value=1.6e-33 Score=213.41 Aligned_cols=220 Identities=17% Similarity=0.146 Sum_probs=158.8
Q ss_pred cCCCCCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEE
Q 024228 39 PKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVG 118 (270)
Q Consensus 39 ~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~G 118 (270)
+.++.++|+||++||++++.. .|..++..|+++|+|+++|+||||.|... ...+.+++++|+.+++++++.++++|+|
T Consensus 10 ~~~~~~~~~iv~lhG~~~~~~-~~~~~~~~l~~~~~vi~~D~~G~G~s~~~-~~~~~~~~~~d~~~~l~~l~~~~~~lvG 87 (255)
T PRK10673 10 AQNPHNNSPIVLVHGLFGSLD-NLGVLARDLVNDHDIIQVDMRNHGLSPRD-PVMNYPAMAQDLLDTLDALQIEKATFIG 87 (255)
T ss_pred CCCCCCCCCEEEECCCCCchh-HHHHHHHHHhhCCeEEEECCCCCCCCCCC-CCCCHHHHHHHHHHHHHHcCCCceEEEE
Confidence 344457899999999999998 99999999998899999999999999864 4578999999999999999999999999
Q ss_pred EchhHHHHHHHHhhCccccccEEEecccCCCCch-hhhHhhhhc------cchh---hhhhcccc-cHHHHHHHHHhhhh
Q 024228 119 VSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTES-VSNAALERI------GYES---WVDFLLPK-TADALKVQFDIACY 187 (270)
Q Consensus 119 ~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~-~~~~~~~~~------~~~~---~~~~~~~~-~~~~~~~~~~~~~~ 187 (270)
|||||.+++.+|.++|++|+++|++++.+..... ......... .... ........ .......+......
T Consensus 88 hS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (255)
T PRK10673 88 HSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSEAGATTRQQAAAIMRQHLNEEGVIQFLLKSFV 167 (255)
T ss_pred ECHHHHHHHHHHHhCHhhcceEEEEecCCCCccchhhHHHHHHHHHhhhcccccHHHHHHHHHHhcCCHHHHHHHHhcCC
Confidence 9999999999999999999999999754322110 000000000 0000 00000000 00000000000000
Q ss_pred cCCC--------------ChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHH
Q 024228 188 KLPT--------------LPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNR 253 (270)
Q Consensus 188 ~~~~--------------~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~ 253 (270)
...+ ........+.+|+|+|+|++|..++.+..+.+.+.++ +.++++++++||+++.++|+++.+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~p~~~~~ 246 (255)
T PRK10673 168 DGEWRFNVPVLWDQYPHIVGWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQFP-QARAHVIAGAGHWVHAEKPDAVLR 246 (255)
T ss_pred cceeEeeHHHHHHhHHHHhCCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhCC-CcEEEEeCCCCCeeeccCHHHHHH
Confidence 0000 0001123345899999999999999999999999988 899999999999999999999999
Q ss_pred HHHHHHHh
Q 024228 254 QLKTILAS 261 (270)
Q Consensus 254 ~i~~fl~~ 261 (270)
.|.+||++
T Consensus 247 ~l~~fl~~ 254 (255)
T PRK10673 247 AIRRYLND 254 (255)
T ss_pred HHHHHHhc
Confidence 99999975
No 17
>PRK06489 hypothetical protein; Provisional
Probab=100.00 E-value=4.3e-33 Score=220.11 Aligned_cols=231 Identities=18% Similarity=0.174 Sum_probs=159.4
Q ss_pred CCeEEEEEecCCCC------CCceEEEeCCCCCcccccHH--HHHHHh--------hccceEEeecCCCCCCCCCCCC--
Q 024228 30 PGTILNIWVPKKTT------KKHAVVLLHPFGFDGILTWQ--FQVLAL--------AKTYEVYVPDFLFFGSSVTDRP-- 91 (270)
Q Consensus 30 ~g~~l~~~~~~~~~------~~~~vv~~hG~~~~~~~~~~--~~~~~l--------~~~~~v~~~d~~g~G~s~~~~~-- 91 (270)
+|.+++|...|... .+|+|||+||++++.. .|. .+.+.| +++|+|+++|+||||.|+.+..
T Consensus 48 ~g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~-~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~~ 126 (360)
T PRK06489 48 PELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGK-SFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDGL 126 (360)
T ss_pred CCceEEEEecCCCCcccccCCCCeEEEeCCCCCchh-hhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcCC
Confidence 67888998877521 1689999999999887 775 454444 5569999999999999986542
Q ss_pred -----CCChHHHHHHHHHHH-HHhCCCceE-EEEEchhHHHHHHHHhhCccccccEEEecccCCCCchh---hhH----h
Q 024228 92 -----DRTASFQAECMAKGL-RKLGVEKCT-LVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESV---SNA----A 157 (270)
Q Consensus 92 -----~~~~~~~~~~~~~~l-~~~~~~~~~-l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~---~~~----~ 157 (270)
.++++++++++.+++ ++++.++++ ++||||||.+|+.+|.++|++|+++|++++........ ... .
T Consensus 127 ~~~~~~~~~~~~a~~~~~~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~~~~~~~~~~~~~~~~~ 206 (360)
T PRK06489 127 RAAFPRYDYDDMVEAQYRLVTEGLGVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQPTEMSGRNWMWRRMLIES 206 (360)
T ss_pred CCCCCcccHHHHHHHHHHHHHHhcCCCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCcccccHHHHHHHHHHHHH
Confidence 368889998888854 889988885 89999999999999999999999999998754221100 000 0
Q ss_pred hhhc-cc--------h-hhhh---h-------------cccccHH----HHHHHHH------------hhhhcCCCChhh
Q 024228 158 LERI-GY--------E-SWVD---F-------------LLPKTAD----ALKVQFD------------IACYKLPTLPAF 195 (270)
Q Consensus 158 ~~~~-~~--------~-~~~~---~-------------~~~~~~~----~~~~~~~------------~~~~~~~~~~~~ 195 (270)
.... .. . .... . ....... .+..... ............
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 286 (360)
T PRK06489 207 IRNDPAWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQAQAPTRAAADKLVDERLAAPVTADANDFLYQWDSSRDYNPSP 286 (360)
T ss_pred HHhCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhcCChHHHHHHHHHHHHhhhhcCHHHHHHHHHHhhccChHH
Confidence 0000 00 0 0000 0 0000000 0000000 000001112234
Q ss_pred hhhhhheeeeEEEcCCCccCCHHHH--HHHHHHhcCCceEEEecCC----CcceeecchHhHHHHHHHHHHhhh
Q 024228 196 VYKHILEKIHLLWGENDKIFDMQVA--RNLKEQVGQNATMESIEKA----GHLVNLERPFVYNRQLKTILASLV 263 (270)
Q Consensus 196 ~~~~~~~P~l~i~g~~D~~~~~~~~--~~~~~~~~~~~~~~~~~~~----gH~~~~~~~~~~~~~i~~fl~~~~ 263 (270)
.+.++.+|+|+|+|++|.++|++.+ +.+.+.++ +.++++++++ ||.++ ++|+++++.|.+||+++.
T Consensus 287 ~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip-~a~l~~i~~a~~~~GH~~~-e~P~~~~~~i~~FL~~~~ 358 (360)
T PRK06489 287 DLEKIKAPVLAINSADDERNPPETGVMEAALKRVK-HGRLVLIPASPETRGHGTT-GSAKFWKAYLAEFLAQVP 358 (360)
T ss_pred HHHhCCCCEEEEecCCCcccChhhHHHHHHHHhCc-CCeEEEECCCCCCCCcccc-cCHHHHHHHHHHHHHhcc
Confidence 4566679999999999999998875 78888888 8999999996 99997 899999999999998764
No 18
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=100.00 E-value=4.4e-33 Score=211.22 Aligned_cols=224 Identities=22% Similarity=0.293 Sum_probs=162.2
Q ss_pred EEEecCCC-CCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCC-CCCChHHHHHHHHHHHHHhCCC
Q 024228 35 NIWVPKKT-TKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDR-PDRTASFQAECMAKGLRKLGVE 112 (270)
Q Consensus 35 ~~~~~~~~-~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~-~~~~~~~~~~~~~~~l~~~~~~ 112 (270)
+|...++. .++|+||++||++++.. .|..+++.|.++|+|+++|+||||.|.... ..++.+++++++.++++.++.+
T Consensus 2 ~~~~~~~~~~~~~~iv~lhG~~~~~~-~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~ 80 (257)
T TIGR03611 2 HYELHGPPDADAPVVVLSSGLGGSGS-YWAPQLDVLTQRFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDALNIE 80 (257)
T ss_pred EEEEecCCCCCCCEEEEEcCCCcchh-HHHHHHHHHHhccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHhCCC
Confidence 45555542 35789999999999998 999999999888999999999999998654 3478999999999999999999
Q ss_pred ceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHh------hhhccchhhhh----hccc-----ccHHH
Q 024228 113 KCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAA------LERIGYESWVD----FLLP-----KTADA 177 (270)
Q Consensus 113 ~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~------~~~~~~~~~~~----~~~~-----~~~~~ 177 (270)
+++++||||||.+++.++.++|++++++|++++............ ........... ...+ .....
T Consensus 81 ~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (257)
T TIGR03611 81 RFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRPDPHTRRCFDVRIALLQHAGPEAYVHAQALFLYPADWISENAAR 160 (257)
T ss_pred cEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCCChhHHHHHHHHHHHHhccCcchhhhhhhhhhccccHhhccchh
Confidence 999999999999999999999999999999987654322111000 00000000000 0000 00000
Q ss_pred H--------------HHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcce
Q 024228 178 L--------------KVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLV 243 (270)
Q Consensus 178 ~--------------~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 243 (270)
. ..................+.++.+|+++++|++|.++|++.++.+++.++ +.+++.++++||++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~ 239 (257)
T TIGR03611 161 LAADEAHALAHFPGKANVLRRINALEAFDVSARLDRIQHPVLLIANRDDMLVPYTQSLRLAAALP-NAQLKLLPYGGHAS 239 (257)
T ss_pred hhhhhhhcccccCccHHHHHHHHHHHcCCcHHHhcccCccEEEEecCcCcccCHHHHHHHHHhcC-CceEEEECCCCCCc
Confidence 0 00000000000111123344556999999999999999999999999987 88999999999999
Q ss_pred eecchHhHHHHHHHHHH
Q 024228 244 NLERPFVYNRQLKTILA 260 (270)
Q Consensus 244 ~~~~~~~~~~~i~~fl~ 260 (270)
++++|+++.+.|.+||+
T Consensus 240 ~~~~~~~~~~~i~~fl~ 256 (257)
T TIGR03611 240 NVTDPETFNRALLDFLK 256 (257)
T ss_pred cccCHHHHHHHHHHHhc
Confidence 99999999999999986
No 19
>PRK10749 lysophospholipase L2; Provisional
Probab=100.00 E-value=2.3e-32 Score=213.48 Aligned_cols=240 Identities=12% Similarity=0.072 Sum_probs=165.3
Q ss_pred eeEEEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCC------CCC
Q 024228 22 TQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRP------DRT 94 (270)
Q Consensus 22 ~~~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~------~~~ 94 (270)
+...+...+|.+++|...++..++++||++||++++.. .|..++..+.+. |+|+++|+||||.|+.... ..+
T Consensus 31 ~~~~~~~~~g~~l~~~~~~~~~~~~~vll~HG~~~~~~-~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~ 109 (330)
T PRK10749 31 EEAEFTGVDDIPIRFVRFRAPHHDRVVVICPGRIESYV-KYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHVER 109 (330)
T ss_pred cceEEEcCCCCEEEEEEccCCCCCcEEEEECCccchHH-HHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCcccc
Confidence 34444555899999988765456789999999999888 899999877766 9999999999999975432 147
Q ss_pred hHHHHHHHHHHHHHh----CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhH----hhhhcc----
Q 024228 95 ASFQAECMAKGLRKL----GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNA----ALERIG---- 162 (270)
Q Consensus 95 ~~~~~~~~~~~l~~~----~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~----~~~~~~---- 162 (270)
.+++++|+.++++.+ +..+++++||||||.+++.+|.++|++++++|+++|........... ......
T Consensus 110 ~~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (330)
T PRK10749 110 FNDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPLPSWMARRILNWAEGHPR 189 (330)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCCCcHHHHHHHHHHHHhcC
Confidence 889999999999886 56799999999999999999999999999999999875422111000 000000
Q ss_pred c--------hhhhhh-c----ccccHHHHHHHHHhhhhcCCC-----C----h---------hhhhhhhheeeeEEEcCC
Q 024228 163 Y--------ESWVDF-L----LPKTADALKVQFDIACYKLPT-----L----P---------AFVYKHILEKIHLLWGEN 211 (270)
Q Consensus 163 ~--------~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~-----~----~---------~~~~~~~~~P~l~i~g~~ 211 (270)
. ...... . ..................... . . .....++.+|+|+++|++
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~ 269 (330)
T PRK10749 190 IRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESILAGEQVLAGAGDITTPLLLLQAEE 269 (330)
T ss_pred CCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHHHHHHHhhccCCCCCEEEEEeCC
Confidence 0 000000 0 000111111111100000000 0 0 012334559999999999
Q ss_pred CccCCHHHHHHHHHHhc------CCceEEEecCCCcceeecch---HhHHHHHHHHHHhh
Q 024228 212 DKIFDMQVARNLKEQVG------QNATMESIEKAGHLVNLERP---FVYNRQLKTILASL 262 (270)
Q Consensus 212 D~~~~~~~~~~~~~~~~------~~~~~~~~~~~gH~~~~~~~---~~~~~~i~~fl~~~ 262 (270)
|.+++++.++.+++.++ .++++++++|+||.++.|.+ +.+.+.|.+||+++
T Consensus 270 D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 270 ERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDFFNRH 329 (330)
T ss_pred CeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHHHhhc
Confidence 99999999998888763 24689999999999998775 56888899999764
No 20
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=100.00 E-value=5.5e-33 Score=209.76 Aligned_cols=225 Identities=20% Similarity=0.220 Sum_probs=163.8
Q ss_pred EEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCc
Q 024228 34 LNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEK 113 (270)
Q Consensus 34 l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~ 113 (270)
++|...++.+++|+||++||++.+.. .|..+++.|.+.|+|+++|+||||.|+.....++.+++++++.++++.++.++
T Consensus 2 ~~~~~~g~~~~~~~li~~hg~~~~~~-~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~~~~ 80 (251)
T TIGR02427 2 LHYRLDGAADGAPVLVFINSLGTDLR-MWDPVLPALTPDFRVLRYDKRGHGLSDAPEGPYSIEDLADDVLALLDHLGIER 80 (251)
T ss_pred ceEEeecCCCCCCeEEEEcCcccchh-hHHHHHHHhhcccEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCc
Confidence 46666665446789999999999998 99999999987799999999999999876666899999999999999999899
Q ss_pred eEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhh-hHhhhh---ccchh-----h----hhhcccccHH---H
Q 024228 114 CTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVS-NAALER---IGYES-----W----VDFLLPKTAD---A 177 (270)
Q Consensus 114 ~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~-~~~~~~---~~~~~-----~----~~~~~~~~~~---~ 177 (270)
++++|||+||.+++.+|.++|++++++|++++......... ...... ..... . .......... .
T Consensus 81 v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (251)
T TIGR02427 81 AVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPESWNARIAAVRAEGLAALADAVLERWFTPGFREAHPARLDL 160 (251)
T ss_pred eEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCchhhHHHHHhhhhhccHHHHHHHHHHHHcccccccCChHHHHH
Confidence 99999999999999999999999999999987643221100 000000 00000 0 0000000000 0
Q ss_pred HHHHHHh---------hhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecch
Q 024228 178 LKVQFDI---------ACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERP 248 (270)
Q Consensus 178 ~~~~~~~---------~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~ 248 (270)
....... ............+.++.+|+++++|++|.++|.+..+.+.+.++ +.++++++++||+.+.++|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~p 239 (251)
T TIGR02427 161 YRNMLVRQPPDGYAGCCAAIRDADFRDRLGAIAVPTLCIAGDQDGSTPPELVREIADLVP-GARFAEIRGAGHIPCVEQP 239 (251)
T ss_pred HHHHHHhcCHHHHHHHHHHHhcccHHHHhhhcCCCeEEEEeccCCcCChHHHHHHHHhCC-CceEEEECCCCCcccccCh
Confidence 1100000 00000111122344556999999999999999999999998887 8899999999999999999
Q ss_pred HhHHHHHHHHHH
Q 024228 249 FVYNRQLKTILA 260 (270)
Q Consensus 249 ~~~~~~i~~fl~ 260 (270)
+++.+.|.+|++
T Consensus 240 ~~~~~~i~~fl~ 251 (251)
T TIGR02427 240 EAFNAALRDFLR 251 (251)
T ss_pred HHHHHHHHHHhC
Confidence 999999999974
No 21
>PHA02857 monoglyceride lipase; Provisional
Probab=100.00 E-value=6.3e-32 Score=206.83 Aligned_cols=237 Identities=15% Similarity=0.077 Sum_probs=160.5
Q ss_pred EEeecCCeEEEEEecCC-CCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCC-CChHHHHHH
Q 024228 25 TIEIEPGTILNIWVPKK-TTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPD-RTASFQAEC 101 (270)
Q Consensus 25 ~i~~~~g~~l~~~~~~~-~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~-~~~~~~~~~ 101 (270)
++..+||.+++|....+ ...++.|+++||+++++. .|..+++.|++. |+|+++|+||||.|+..... .+...+++|
T Consensus 4 ~~~~~~g~~l~~~~~~~~~~~~~~v~llHG~~~~~~-~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~~~~~~~~~~~d 82 (276)
T PHA02857 4 CMFNLDNDYIYCKYWKPITYPKALVFISHGAGEHSG-RYEELAENISSLGILVFSHDHIGHGRSNGEKMMIDDFGVYVRD 82 (276)
T ss_pred eeecCCCCEEEEEeccCCCCCCEEEEEeCCCccccc-hHHHHHHHHHhCCCEEEEccCCCCCCCCCccCCcCCHHHHHHH
Confidence 34455899998865444 244567777799999999 999999999887 99999999999999754322 455666777
Q ss_pred HHHHHHHh----CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhh----h-ccchhhh----h
Q 024228 102 MAKGLRKL----GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALE----R-IGYESWV----D 168 (270)
Q Consensus 102 ~~~~l~~~----~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~----~-~~~~~~~----~ 168 (270)
+.+.++.+ ...+++|+||||||.+|+.+|.++|++++++|+++|.............. . ....... .
T Consensus 83 ~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (276)
T PHA02857 83 VVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAEAVPRLNLLAAKLMGIFYPNKIVGKLCP 162 (276)
T ss_pred HHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEeccccccccccHHHHHHHHHHHHhCCCCccCCCCH
Confidence 77777654 34589999999999999999999999999999999865422111000000 0 0000000 0
Q ss_pred hcccccHHHHHHHHHhhhh--------------cCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEE
Q 024228 169 FLLPKTADALKVQFDIACY--------------KLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATME 234 (270)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~ 234 (270)
................... .........+.++.+|+|+++|++|.++|++.++.+.+.+..+.++.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~l~~~~~~~~~~~ 242 (276)
T PHA02857 163 ESVSRDMDEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKIKTPILILQGTNNEISDVSGAYYFMQHANCNREIK 242 (276)
T ss_pred hhccCCHHHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhcccCCCCEEEEecCCCCcCChHHHHHHHHHccCCceEE
Confidence 0000000000000000000 00000112344555999999999999999999999998875478999
Q ss_pred EecCCCcceeecch---HhHHHHHHHHHHhh
Q 024228 235 SIEKAGHLVNLERP---FVYNRQLKTILASL 262 (270)
Q Consensus 235 ~~~~~gH~~~~~~~---~~~~~~i~~fl~~~ 262 (270)
+++++||.++.|.+ +++.+.+.+||...
T Consensus 243 ~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 243 IYEGAKHHLHKETDEVKKSVMKEIETWIFNR 273 (276)
T ss_pred EeCCCcccccCCchhHHHHHHHHHHHHHHHh
Confidence 99999999998865 56889999999875
No 22
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=4.4e-32 Score=212.58 Aligned_cols=243 Identities=18% Similarity=0.165 Sum_probs=164.7
Q ss_pred eeEEEeecCCeEEEEEecCCC---CCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCC-CCChH
Q 024228 22 TQRTIEIEPGTILNIWVPKKT---TKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRP-DRTAS 96 (270)
Q Consensus 22 ~~~~i~~~~g~~l~~~~~~~~---~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~-~~~~~ 96 (270)
+...+...||.+++|+...+. +.+++||++||++.+....|..++..|++. |+|+++|+||||.|+.... ..+.+
T Consensus 33 ~~~~~~~~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~ 112 (330)
T PLN02298 33 SKSFFTSPRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLRAYVPNVD 112 (330)
T ss_pred ccceEEcCCCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCccccCCCHH
Confidence 355677779999998654332 346789999999866432567778888876 9999999999999975433 35788
Q ss_pred HHHHHHHHHHHHhCC------CceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhh-----hH---hhhhcc
Q 024228 97 FQAECMAKGLRKLGV------EKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVS-----NA---ALERIG 162 (270)
Q Consensus 97 ~~~~~~~~~l~~~~~------~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~-----~~---~~~~~~ 162 (270)
.+++|+.++++.+.. .+++|+||||||.+++.++.++|++|+++|+++|......... .. ......
T Consensus 113 ~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (330)
T PLN02298 113 LVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKIRPPWPIPQILTFVARFL 192 (330)
T ss_pred HHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCCcccCCchHHHHHHHHHHHHC
Confidence 899999999998743 3799999999999999999999999999999998754322110 00 000000
Q ss_pred chhh-h--hhcccccH--HHHHHHHHh--hhhcCC-------------CChhhhhhhhheeeeEEEcCCCccCCHHHHHH
Q 024228 163 YESW-V--DFLLPKTA--DALKVQFDI--ACYKLP-------------TLPAFVYKHILEKIHLLWGENDKIFDMQVARN 222 (270)
Q Consensus 163 ~~~~-~--~~~~~~~~--~~~~~~~~~--~~~~~~-------------~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~ 222 (270)
.... . ........ ......... ..+... ......+..+.+|+|+++|++|.++|++.++.
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~ivp~~~~~~ 272 (330)
T PLN02298 193 PTLAIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVTDYLGKKLKDVSIPFIVLHGSADVVTDPDVSRA 272 (330)
T ss_pred CCCccccCCCcccccccCHHHHHHHHhCccccCCCccHHHHHHHHHHHHHHHHhhhhcCCCEEEEecCCCCCCCHHHHHH
Confidence 0000 0 00000000 000000000 000000 00112344556999999999999999999999
Q ss_pred HHHHhc-CCceEEEecCCCcceeecchH----hHHHHHHHHHHhhhh
Q 024228 223 LKEQVG-QNATMESIEKAGHLVNLERPF----VYNRQLKTILASLVH 264 (270)
Q Consensus 223 ~~~~~~-~~~~~~~~~~~gH~~~~~~~~----~~~~~i~~fl~~~~~ 264 (270)
+++.++ .+++++++++++|.++.++|+ .+.+.|.+||.+...
T Consensus 273 l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~~~ 319 (330)
T PLN02298 273 LYEEAKSEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNERCT 319 (330)
T ss_pred HHHHhccCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHhcc
Confidence 988875 468999999999999988775 467788899987754
No 23
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=100.00 E-value=1.8e-31 Score=197.63 Aligned_cols=239 Identities=19% Similarity=0.228 Sum_probs=162.5
Q ss_pred eeEEEeecCCeEEEEEecCC-CCCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCC----CChH
Q 024228 22 TQRTIEIEPGTILNIWVPKK-TTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPD----RTAS 96 (270)
Q Consensus 22 ~~~~i~~~~g~~l~~~~~~~-~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~----~~~~ 96 (270)
..+.+.++++..+....... ..+++++|++||+|.... .|..-.+.|++..+|+++|++|+|+|+++.-. ....
T Consensus 66 ~~~~v~i~~~~~iw~~~~~~~~~~~~plVliHGyGAg~g-~f~~Nf~~La~~~~vyaiDllG~G~SSRP~F~~d~~~~e~ 144 (365)
T KOG4409|consen 66 SKKYVRIPNGIEIWTITVSNESANKTPLVLIHGYGAGLG-LFFRNFDDLAKIRNVYAIDLLGFGRSSRPKFSIDPTTAEK 144 (365)
T ss_pred ceeeeecCCCceeEEEeecccccCCCcEEEEeccchhHH-HHHHhhhhhhhcCceEEecccCCCCCCCCCCCCCcccchH
Confidence 45566666666654433332 356899999999999999 99999999999999999999999999988743 3445
Q ss_pred HHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCch-h-------hhHhhhhcc------
Q 024228 97 FQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTES-V-------SNAALERIG------ 162 (270)
Q Consensus 97 ~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~-~-------~~~~~~~~~------ 162 (270)
.+++-+.++....++++.+|+|||+||+++..||.++|++|+.+||++|+...... . ...+.....
T Consensus 145 ~fvesiE~WR~~~~L~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 224 (365)
T KOG4409|consen 145 EFVESIEQWRKKMGLEKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDSEPEFTKPPPEWYKALFLVATNF 224 (365)
T ss_pred HHHHHHHHHHHHcCCcceeEeeccchHHHHHHHHHhChHhhceEEEecccccccCCCcchhhcCCChHHHhhhhhhhhcC
Confidence 67888999999999999999999999999999999999999999999998654321 0 001110000
Q ss_pred -chhhh-----------hhcccccHHHH---------HHHHHhh--------------hhcCCCChhhhhhhh---h--e
Q 024228 163 -YESWV-----------DFLLPKTADAL---------KVQFDIA--------------CYKLPTLPAFVYKHI---L--E 202 (270)
Q Consensus 163 -~~~~~-----------~~~~~~~~~~~---------~~~~~~~--------------~~~~~~~~~~~~~~~---~--~ 202 (270)
..... ..+.+.....+ .+.+... .....|.....+.++ . +
T Consensus 225 nPl~~LR~~Gp~Gp~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g~Ar~Pm~~r~~~l~~~~ 304 (365)
T KOG4409|consen 225 NPLALLRLMGPLGPKLVSRLRPDRFRKFPSLIEEDFLHEYIYHCNAQNPSGETAFKNLFEPGGWARRPMIQRLRELKKDV 304 (365)
T ss_pred CHHHHHHhccccchHHHhhhhHHHHHhccccchhHHHHHHHHHhcCCCCcHHHHHHHHHhccchhhhhHHHHHHhhccCC
Confidence 00000 00000000000 0000000 000011111111111 1 9
Q ss_pred eeeEEEcCCCccCCHHHHHHHHHHhc-CCceEEEecCCCcceeecchHhHHHHHHHHHHhh
Q 024228 203 KIHLLWGENDKIFDMQVARNLKEQVG-QNATMESIEKAGHLVNLERPFVYNRQLKTILASL 262 (270)
Q Consensus 203 P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 262 (270)
|+++|+|++|.+ +......+.+.+. ..++.++++++||..++++|+.|++.+.++++..
T Consensus 305 pv~fiyG~~dWm-D~~~g~~~~~~~~~~~~~~~~v~~aGHhvylDnp~~Fn~~v~~~~~~~ 364 (365)
T KOG4409|consen 305 PVTFIYGDRDWM-DKNAGLEVTKSLMKEYVEIIIVPGAGHHVYLDNPEFFNQIVLEECDKV 364 (365)
T ss_pred CEEEEecCcccc-cchhHHHHHHHhhcccceEEEecCCCceeecCCHHHHHHHHHHHHhcc
Confidence 999999999976 4455555555433 4689999999999999999999999999998753
No 24
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=100.00 E-value=1e-31 Score=206.43 Aligned_cols=244 Identities=29% Similarity=0.402 Sum_probs=171.3
Q ss_pred cCCceeEEEeecCC--eEEEEEecCC-----C--CCCceEEEeCCCCCcccccHHHHHHHhhcc--ceEEeecCCCCCCC
Q 024228 18 LVGMTQRTIEIEPG--TILNIWVPKK-----T--TKKHAVVLLHPFGFDGILTWQFQVLALAKT--YEVYVPDFLFFGSS 86 (270)
Q Consensus 18 ~~~~~~~~i~~~~g--~~l~~~~~~~-----~--~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~--~~v~~~d~~g~G~s 86 (270)
........++.+.| ....-|.+.. . ..+++||++||++++.. .|+.++..|.+. +.|+++|++|+|.+
T Consensus 22 ~~~~~~~~i~~~~g~~~~~~~w~~~~~~~~~~~~~~~~pvlllHGF~~~~~-~w~~~~~~L~~~~~~~v~aiDl~G~g~~ 100 (326)
T KOG1454|consen 22 FVTLRSTSIEIPWGPLTIRSKWIPNLDKYGSPGDKDKPPVLLLHGFGASSF-SWRRVVPLLSKAKGLRVLAIDLPGHGYS 100 (326)
T ss_pred eccccceEEEcccCCceeEEEEeccceeccCCCCCCCCcEEEeccccCCcc-cHhhhccccccccceEEEEEecCCCCcC
Confidence 34556667777666 3333332222 1 36899999999999998 999999999998 99999999999954
Q ss_pred C-CCCCC-CChHHHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEE---EecccCCCCchhhhHhhhhc
Q 024228 87 V-TDRPD-RTASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMV---VTCSVMGLTESVSNAALERI 161 (270)
Q Consensus 87 ~-~~~~~-~~~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i---~~~~~~~~~~~~~~~~~~~~ 161 (270)
+ .+... ++...+++.+..+......++++++|||+||.+|+.+|+.+|+.|++++ ++++................
T Consensus 101 s~~~~~~~y~~~~~v~~i~~~~~~~~~~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~ 180 (326)
T KOG1454|consen 101 SPLPRGPLYTLRELVELIRRFVKEVFVEPVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRRLL 180 (326)
T ss_pred CCCCCCCceehhHHHHHHHHHHHhhcCcceEEEEeCcHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHHhh
Confidence 4 33333 8888889999999999888899999999999999999999999999999 56555443322211111100
Q ss_pred c-chhhhhhcc------------------------c--ccHHHHHHHHH---------h-----hhhcCC--CChhhhhh
Q 024228 162 G-YESWVDFLL------------------------P--KTADALKVQFD---------I-----ACYKLP--TLPAFVYK 198 (270)
Q Consensus 162 ~-~~~~~~~~~------------------------~--~~~~~~~~~~~---------~-----~~~~~~--~~~~~~~~ 198 (270)
. ......... . ........... . ...... ........
T Consensus 181 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (326)
T KOG1454|consen 181 DKFLSALELLIPLSLTEPVRLVSEGLLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLLSLIK 260 (326)
T ss_pred hhhccHhhhcCccccccchhheeHhhhcceeeeccccccchhhhhhheecccccchhhhheeeEEEeccCccchHHHhhc
Confidence 0 000000000 0 00000000000 0 000001 22233444
Q ss_pred hhh-eeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHHhhh
Q 024228 199 HIL-EKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILASLV 263 (270)
Q Consensus 199 ~~~-~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 263 (270)
++. +|+|+++|++|.++|.+.+..+.+.++ ++++++++++||.+++|.|+++++.|..|+++..
T Consensus 261 ~i~~~pvlii~G~~D~~~p~~~~~~~~~~~p-n~~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi~~~~ 325 (326)
T KOG1454|consen 261 KIWKCPVLIIWGDKDQIVPLELAEELKKKLP-NAELVEIPGAGHLPHLERPEEVAALLRSFIARLR 325 (326)
T ss_pred cccCCceEEEEcCcCCccCHHHHHHHHhhCC-CceEEEeCCCCcccccCCHHHHHHHHHHHHHHhc
Confidence 555 999999999999999999999999996 9999999999999999999999999999998753
No 25
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=100.00 E-value=2e-31 Score=200.39 Aligned_cols=207 Identities=21% Similarity=0.199 Sum_probs=144.8
Q ss_pred CceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEEchhHH
Q 024228 45 KHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVSYGGM 124 (270)
Q Consensus 45 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~ 124 (270)
+|+|||+||++++.. .|..+++.|. +|+|+++|+||||.|+.+.. .+.+.+++|+.+++++++.++++++||||||.
T Consensus 2 ~p~vvllHG~~~~~~-~w~~~~~~l~-~~~vi~~D~~G~G~S~~~~~-~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~ 78 (242)
T PRK11126 2 LPWLVFLHGLLGSGQ-DWQPVGEALP-DYPRLYIDLPGHGGSAAISV-DGFADVSRLLSQTLQSYNILPYWLVGYSLGGR 78 (242)
T ss_pred CCEEEEECCCCCChH-HHHHHHHHcC-CCCEEEecCCCCCCCCCccc-cCHHHHHHHHHHHHHHcCCCCeEEEEECHHHH
Confidence 578999999999999 9999999884 69999999999999986543 58899999999999999999999999999999
Q ss_pred HHHHHHhhCccc-cccEEEecccCCCCchhhh--Hh------hhhc---cchhhh-hh--------cccccHHHH-----
Q 024228 125 VGFKMAEMYPDL-VESMVVTCSVMGLTESVSN--AA------LERI---GYESWV-DF--------LLPKTADAL----- 178 (270)
Q Consensus 125 ~a~~~a~~~p~~-v~~~i~~~~~~~~~~~~~~--~~------~~~~---~~~~~~-~~--------~~~~~~~~~----- 178 (270)
+++.+|.++|++ |++++++++.......... .. .... ...... .. .........
T Consensus 79 va~~~a~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (242)
T PRK11126 79 IAMYYACQGLAGGLCGLIVEGGNPGLQNAEERQARWQNDRQWAQRFRQEPLEQVLADWYQQPVFASLNAEQRQQLVAKRS 158 (242)
T ss_pred HHHHHHHhCCcccccEEEEeCCCCCCCCHHHHHHHHhhhHHHHHHhccCcHHHHHHHHHhcchhhccCccHHHHHHHhcc
Confidence 999999999664 9999998876543221110 00 0000 000000 00 000000000
Q ss_pred -------HHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHhH
Q 024228 179 -------KVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVY 251 (270)
Q Consensus 179 -------~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~ 251 (270)
...+..............+.++.+|+++++|++|..+. .+.+. . ++++++++++||+++.|+|+++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-----~~~~~-~-~~~~~~i~~~gH~~~~e~p~~~ 231 (242)
T PRK11126 159 NNNGAAVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQ-----ALAQQ-L-ALPLHVIPNAGHNAHRENPAAF 231 (242)
T ss_pred cCCHHHHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHH-----HHHHH-h-cCeEEEeCCCCCchhhhChHHH
Confidence 00000000000111123455667999999999998652 22333 2 7899999999999999999999
Q ss_pred HHHHHHHHHh
Q 024228 252 NRQLKTILAS 261 (270)
Q Consensus 252 ~~~i~~fl~~ 261 (270)
++.|.+|++.
T Consensus 232 ~~~i~~fl~~ 241 (242)
T PRK11126 232 AASLAQILRL 241 (242)
T ss_pred HHHHHHHHhh
Confidence 9999999975
No 26
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=100.00 E-value=7.5e-31 Score=199.24 Aligned_cols=228 Identities=15% Similarity=0.106 Sum_probs=160.3
Q ss_pred CCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCC-CCChHHHHHHHHHHHH
Q 024228 30 PGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRP-DRTASFQAECMAKGLR 107 (270)
Q Consensus 30 ~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~-~~~~~~~~~~~~~~l~ 107 (270)
+|.+++|..+.. ++|+|||+||++.+.. .|..+...|.+. |+|+++|+||||.|..... ..+++++++++.++++
T Consensus 5 ~~~~~~~~~~~~--~~p~vvliHG~~~~~~-~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~~i~ 81 (273)
T PLN02211 5 NGEEVTDMKPNR--QPPHFVLIHGISGGSW-CWYKIRCLMENSGYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLIDFLS 81 (273)
T ss_pred cccccccccccC--CCCeEEEECCCCCCcC-cHHHHHHHHHhCCCEEEEecccCCCCCCCCcccCCCHHHHHHHHHHHHH
Confidence 688888877533 5789999999999999 999999999875 9999999999998864433 3789999999999999
Q ss_pred HhC-CCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhh-Hhhhhcc-chhh------------------
Q 024228 108 KLG-VEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSN-AALERIG-YESW------------------ 166 (270)
Q Consensus 108 ~~~-~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~-~~~~~~~-~~~~------------------ 166 (270)
.+. .++++|+||||||.++..++.++|++|+++|++++.......... ....... ....
T Consensus 82 ~l~~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (273)
T PLN02211 82 SLPENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATMLKLGFQTDEDMKDGVPDLSEFGDVYELGFGLGPDQPPTS 161 (273)
T ss_pred hcCCCCCEEEEEECchHHHHHHHHHhChhheeEEEEeccccCCCCCCHHHHHhccccchhhhccceeeeeccCCCCCCce
Confidence 985 579999999999999999999999999999999875432111000 0000000 0000
Q ss_pred --------hhhcccccHHHHHHHHHhhhh----cC--CCChhhhhhhh-heeeeEEEcCCCccCCHHHHHHHHHHhcCCc
Q 024228 167 --------VDFLLPKTADALKVQFDIACY----KL--PTLPAFVYKHI-LEKIHLLWGENDKIFDMQVARNLKEQVGQNA 231 (270)
Q Consensus 167 --------~~~~~~~~~~~~~~~~~~~~~----~~--~~~~~~~~~~~-~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~ 231 (270)
...+................. .. ..........+ .+|+++|.|++|..+|++..+.+.+.++ ..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~l~I~g~~D~~ip~~~~~~m~~~~~-~~ 240 (273)
T PLN02211 162 AIIKKEFRRKILYQMSPQEDSTLAAMLLRPGPILALRSARFEEETGDIDKVPRVYIKTLHDHVVKPEQQEAMIKRWP-PS 240 (273)
T ss_pred eeeCHHHHHHHHhcCCCHHHHHHHHHhcCCcCccccccccccccccccCccceEEEEeCCCCCCCHHHHHHHHHhCC-cc
Confidence 000000000000000000000 00 00000111223 4899999999999999999999999987 77
Q ss_pred eEEEecCCCcceeecchHhHHHHHHHHHHhh
Q 024228 232 TMESIEKAGHLVNLERPFVYNRQLKTILASL 262 (270)
Q Consensus 232 ~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 262 (270)
+++.++ +||.+++++|+++.+.|.++....
T Consensus 241 ~~~~l~-~gH~p~ls~P~~~~~~i~~~a~~~ 270 (273)
T PLN02211 241 QVYELE-SDHSPFFSTPFLLFGLLIKAAASV 270 (273)
T ss_pred EEEEEC-CCCCccccCHHHHHHHHHHHHHHh
Confidence 899997 899999999999999999887643
No 27
>PRK07581 hypothetical protein; Validated
Probab=100.00 E-value=7.7e-31 Score=206.20 Aligned_cols=233 Identities=18% Similarity=0.133 Sum_probs=155.4
Q ss_pred CCeEEEEEecCCC--CCCceEEEeCCCCCcccccHHHHH---HHhhc-cceEEeecCCCCCCCCCCCC---CCChH----
Q 024228 30 PGTILNIWVPKKT--TKKHAVVLLHPFGFDGILTWQFQV---LALAK-TYEVYVPDFLFFGSSVTDRP---DRTAS---- 96 (270)
Q Consensus 30 ~g~~l~~~~~~~~--~~~~~vv~~hG~~~~~~~~~~~~~---~~l~~-~~~v~~~d~~g~G~s~~~~~---~~~~~---- 96 (270)
+|.+++|...|.. .+.|+||++||++++.. .|..++ +.|.. +|+|+++|+||||.|+.+.. .++.+
T Consensus 24 ~~~~l~y~~~G~~~~~~~~~vll~~~~~~~~~-~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~ 102 (339)
T PRK07581 24 PDARLAYKTYGTLNAAKDNAILYPTWYSGTHQ-DNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFPH 102 (339)
T ss_pred CCceEEEEecCccCCCCCCEEEEeCCCCCCcc-cchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCCc
Confidence 6788899888753 23466777777777766 665443 46754 49999999999999985532 23333
Q ss_pred -HHHHHHHH----HHHHhCCCce-EEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhh---Hhh---------
Q 024228 97 -FQAECMAK----GLRKLGVEKC-TLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSN---AAL--------- 158 (270)
Q Consensus 97 -~~~~~~~~----~l~~~~~~~~-~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~---~~~--------- 158 (270)
.+++|+.+ ++++++.+++ +|+||||||++|+.+|.++|++|+++|++++.......... ...
T Consensus 103 ~~~~~~~~~~~~~l~~~lgi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~~~~~~~~~~~~~~~~l~~~~~~ 182 (339)
T PRK07581 103 VTIYDNVRAQHRLLTEKFGIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAKTTPHNFVFLEGLKAALTADPAF 182 (339)
T ss_pred eeHHHHHHHHHHHHHHHhCCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCCCCHHHHHHHHHHHHHHHhCCCC
Confidence 24566654 6788999994 79999999999999999999999999999876542211000 000
Q ss_pred -----------------hhccchhh-hhhccc--------cc-HHHHHHHHHhh---------------hh-----cC--
Q 024228 159 -----------------ERIGYESW-VDFLLP--------KT-ADALKVQFDIA---------------CY-----KL-- 189 (270)
Q Consensus 159 -----------------~~~~~~~~-~~~~~~--------~~-~~~~~~~~~~~---------------~~-----~~-- 189 (270)
........ ...+.. .. ........... .. ..
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 262 (339)
T PRK07581 183 NGGWYAEPPERGLRAHARVYAGWGFSQAFYRQELWRAMGYASLEDFLVGFWEGNFLPRDPNNLLAMLWTWQRGDISRNPA 262 (339)
T ss_pred CCCCCCCcHHHHHHHHHHHHHHHHhHHHHHHhhhccccChhhHHHHHHHHHHHhhcccCcccHHHHHHHhhhcccccCcc
Confidence 00000000 000000 00 00000000000 00 00
Q ss_pred -CCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecC-CCcceeecchHhHHHHHHHHHHhhhh
Q 024228 190 -PTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEK-AGHLVNLERPFVYNRQLKTILASLVH 264 (270)
Q Consensus 190 -~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~~i~~fl~~~~~ 264 (270)
.......+.++.+|+|+|+|++|..+|++.++.+.+.++ +++++++++ +||..++++++++.+.|.+||++...
T Consensus 263 ~~~d~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~ip-~a~l~~i~~~~GH~~~~~~~~~~~~~~~~~~~~~~~ 338 (339)
T PRK07581 263 YGGDLAAALGSITAKTFVMPISTDLYFPPEDCEAEAALIP-NAELRPIESIWGHLAGFGQNPADIAFIDAALKELLA 338 (339)
T ss_pred cCCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCC-CCeEEEeCCCCCccccccCcHHHHHHHHHHHHHHHh
Confidence 001223445566999999999999999999999999987 899999998 89999999999999999999998653
No 28
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=100.00 E-value=2.5e-30 Score=199.20 Aligned_cols=233 Identities=20% Similarity=0.155 Sum_probs=160.0
Q ss_pred EEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCC---CCChHHHHH
Q 024228 25 TIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRP---DRTASFQAE 100 (270)
Q Consensus 25 ~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~---~~~~~~~~~ 100 (270)
.+++ +|..+.|...+....+++|||+||++++....|..+...+.+. |+|+++|+||+|.|..+.. ..+.+.+++
T Consensus 6 ~~~~-~~~~~~~~~~~~~~~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~ 84 (288)
T TIGR01250 6 IITV-DGGYHLFTKTGGEGEKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVD 84 (288)
T ss_pred eecC-CCCeEEEEeccCCCCCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHHH
Confidence 3455 5667777766654457899999998766552556666777764 9999999999999986532 268899999
Q ss_pred HHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhh--Hhhhhccc---hhhhhhc-----
Q 024228 101 CMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSN--AALERIGY---ESWVDFL----- 170 (270)
Q Consensus 101 ~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~----- 170 (270)
++.+++++++.++++++||||||.+++.+|.++|++++++|++++.......... ........ .......
T Consensus 85 ~~~~~~~~~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (288)
T TIGR01250 85 ELEEVREKLGLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDSAPEYVKELNRLRKELPPEVRAAIKRCEASGDY 164 (288)
T ss_pred HHHHHHHHcCCCcEEEEEeehHHHHHHHHHHhCccccceeeEecccccchHHHHHHHHHHhhcChhHHHHHHHHHhccCc
Confidence 9999999999899999999999999999999999999999999876533211100 00000000 0000000
Q ss_pred cc-------------------ccHHHHHHHHHhh---hhc--------------CCCChhhhhhhhheeeeEEEcCCCcc
Q 024228 171 LP-------------------KTADALKVQFDIA---CYK--------------LPTLPAFVYKHILEKIHLLWGENDKI 214 (270)
Q Consensus 171 ~~-------------------~~~~~~~~~~~~~---~~~--------------~~~~~~~~~~~~~~P~l~i~g~~D~~ 214 (270)
.. ............. .+. ..+.....+.++.+|+++++|++|.+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~ 244 (288)
T TIGR01250 165 DNPEYQEAVEVFYHHLLCRTRKWPEALKHLKSGMNTNVYNIMQGPNEFTITGNLKDWDITDKLSEIKVPTLLTVGEFDTM 244 (288)
T ss_pred chHHHHHHHHHHHHHhhcccccchHHHHHHhhccCHHHHhcccCCccccccccccccCHHHHhhccCCCEEEEecCCCcc
Confidence 00 0000000000000 000 00011223445669999999999985
Q ss_pred CCHHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHH
Q 024228 215 FDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILA 260 (270)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 260 (270)
+++..+.+.+.++ +.++++++++||+.+.++|+++.+.|.+||+
T Consensus 245 -~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 245 -TPEAAREMQELIA-GSRLVVFPDGSHMTMIEDPEVYFKLLSDFIR 288 (288)
T ss_pred -CHHHHHHHHHhcc-CCeEEEeCCCCCCcccCCHHHHHHHHHHHhC
Confidence 6678888888887 8899999999999999999999999999984
No 29
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.98 E-value=2.2e-31 Score=198.05 Aligned_cols=205 Identities=27% Similarity=0.329 Sum_probs=150.2
Q ss_pred EEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCC--CCChHHHHHHHHHHHHHhCCCceEEEEEchhHHH
Q 024228 48 VVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRP--DRTASFQAECMAKGLRKLGVEKCTLVGVSYGGMV 125 (270)
Q Consensus 48 vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~ 125 (270)
|||+||++++.. .|..+++.|+++|+|+++|+||+|.|+.... ..+.+++++|+.+++++++.++++++|||+||.+
T Consensus 1 vv~~hG~~~~~~-~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~~ 79 (228)
T PF12697_consen 1 VVFLHGFGGSSE-SWDPLAEALARGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALGIKKVILVGHSMGGMI 79 (228)
T ss_dssp EEEE-STTTTGG-GGHHHHHHHHTTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTTTSSEEEEEETHHHHH
T ss_pred eEEECCCCCCHH-HHHHHHHHHhCCCEEEEEecCCccccccccccCCcchhhhhhhhhhccccccccccccccccccccc
Confidence 799999999998 9999999997669999999999999987653 5788999999999999999999999999999999
Q ss_pred HHHHHhhCccccccEEEecccCCCCchh----hhHhhhhcc-----------chhhhhhcccccHHHHH-----HHHHhh
Q 024228 126 GFKMAEMYPDLVESMVVTCSVMGLTESV----SNAALERIG-----------YESWVDFLLPKTADALK-----VQFDIA 185 (270)
Q Consensus 126 a~~~a~~~p~~v~~~i~~~~~~~~~~~~----~~~~~~~~~-----------~~~~~~~~~~~~~~~~~-----~~~~~~ 185 (270)
++.++.++|++|+++|++++........ ......... ................. .+....
T Consensus 80 a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (228)
T PF12697_consen 80 ALRLAARYPDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSLRRLASRFFYRWFDGDEPEDLIRSSRRALAEYL 159 (228)
T ss_dssp HHHHHHHSGGGEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccceeecccccccccccccccchhhhhhhhcccccccccccccccccccccccccccccccccccccc
Confidence 9999999999999999999987543211 011111100 00000111100000000 000000
Q ss_pred hh-cCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHHH
Q 024228 186 CY-KLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQ 254 (270)
Q Consensus 186 ~~-~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~ 254 (270)
.. .........+..+.+|+++++|++|.+++.+..+.+.+.++ ++++++++++||++++++|+++++.
T Consensus 160 ~~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~p~~~~~a 228 (228)
T PF12697_consen 160 RSNLWQADLSEALPRIKVPVLVIHGEDDPIVPPESAEELADKLP-NAELVVIPGAGHFLFLEQPDEVAEA 228 (228)
T ss_dssp HHHHHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHST-TEEEEEETTSSSTHHHHSHHHHHHH
T ss_pred ccccccccccccccccCCCeEEeecCCCCCCCHHHHHHHHHHCC-CCEEEEECCCCCccHHHCHHHHhcC
Confidence 00 00011123344555999999999999999999999999887 9999999999999999999998763
No 30
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.98 E-value=2e-30 Score=205.73 Aligned_cols=234 Identities=20% Similarity=0.173 Sum_probs=161.0
Q ss_pred CCeEEEEEecCCC--CCCceEEEeCCCCCccccc-------------HHHHH----HHhhccceEEeecCCCC-CCCCCC
Q 024228 30 PGTILNIWVPKKT--TKKHAVVLLHPFGFDGILT-------------WQFQV----LALAKTYEVYVPDFLFF-GSSVTD 89 (270)
Q Consensus 30 ~g~~l~~~~~~~~--~~~~~vv~~hG~~~~~~~~-------------~~~~~----~~l~~~~~v~~~d~~g~-G~s~~~ 89 (270)
+|.+++|...|.. ..+|+||++||++++.. . |..++ ..+.++|+|+++|++|+ |.|..+
T Consensus 31 ~~~~~~y~~~G~~~~~~~p~vvl~HG~~~~~~-~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~ 109 (379)
T PRK00175 31 PPVELAYETYGTLNADRSNAVLICHALTGDHH-VAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGP 109 (379)
T ss_pred CCceEEEEeccccCCCCCCEEEEeCCcCCchh-hcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCC
Confidence 5667889888752 24689999999999887 4 56665 33355699999999983 444322
Q ss_pred C--------------CCCChHHHHHHHHHHHHHhCCCc-eEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhh
Q 024228 90 R--------------PDRTASFQAECMAKGLRKLGVEK-CTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVS 154 (270)
Q Consensus 90 ~--------------~~~~~~~~~~~~~~~l~~~~~~~-~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~ 154 (270)
. ..++++++++++.+++++++.++ ++++||||||.+++.+|.++|++|+++|++++.........
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 189 (379)
T PRK00175 110 SSINPDTGKPYGSDFPVITIRDWVRAQARLLDALGITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSARLSAQNI 189 (379)
T ss_pred CCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCcccCHHHH
Confidence 1 14789999999999999999999 48999999999999999999999999999998764332100
Q ss_pred ---h---Hhhh-hcc------------------------------chhhhhhccc----c----------cHHHHHH---
Q 024228 155 ---N---AALE-RIG------------------------------YESWVDFLLP----K----------TADALKV--- 180 (270)
Q Consensus 155 ---~---~~~~-~~~------------------------------~~~~~~~~~~----~----------~~~~~~~--- 180 (270)
. .... ... .......+.. . ....+..
T Consensus 190 ~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~ 269 (379)
T PRK00175 190 AFNEVARQAILADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPFGFDVEFQVESYLRYQG 269 (379)
T ss_pred HHHHHHHHHHHhCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccccccCCCccchHHHHHHHHH
Confidence 0 0000 000 0000000000 0 0000000
Q ss_pred --HHHh----------hhhcC-C------CChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCc----eEEEec
Q 024228 181 --QFDI----------ACYKL-P------TLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNA----TMESIE 237 (270)
Q Consensus 181 --~~~~----------~~~~~-~------~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~----~~~~~~ 237 (270)
.... ..... . ..-...+.++.+|+|+|+|++|.++|++.++.+.+.++ +. ++++++
T Consensus 270 ~~~~~~~d~~~~~~~~~~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~~~p~~~~~~la~~i~-~a~~~~~l~~i~ 348 (379)
T PRK00175 270 DKFVERFDANSYLYLTRALDYFDPARGRGGDLAAALARIKARFLVVSFTSDWLFPPARSREIVDALL-AAGADVSYAEID 348 (379)
T ss_pred HHHhhccCchHHHHHHHHHHhccccCCCCCCHHHHHhcCCCCEEEEEECCccccCHHHHHHHHHHHH-hcCCCeEEEEeC
Confidence 0000 00000 0 01234455667999999999999999999999999997 54 777775
Q ss_pred -CCCcceeecchHhHHHHHHHHHHhhhhh
Q 024228 238 -KAGHLVNLERPFVYNRQLKTILASLVHA 265 (270)
Q Consensus 238 -~~gH~~~~~~~~~~~~~i~~fl~~~~~~ 265 (270)
++||.+++++|+++++.|.+||+++...
T Consensus 349 ~~~GH~~~le~p~~~~~~L~~FL~~~~~~ 377 (379)
T PRK00175 349 SPYGHDAFLLDDPRYGRLVRAFLERAARE 377 (379)
T ss_pred CCCCchhHhcCHHHHHHHHHHHHHhhhhc
Confidence 8999999999999999999999987643
No 31
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.98 E-value=8e-31 Score=197.28 Aligned_cols=208 Identities=17% Similarity=0.171 Sum_probs=146.4
Q ss_pred CceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEEchhHH
Q 024228 45 KHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVSYGGM 124 (270)
Q Consensus 45 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~ 124 (270)
+|+|||+||++++.. .|..+++.|.+.|+|+++|+||+|.|+.. ...+.+++++++.+.+ .++++++||||||.
T Consensus 4 ~~~iv~~HG~~~~~~-~~~~~~~~l~~~~~vi~~d~~G~G~s~~~-~~~~~~~~~~~~~~~~----~~~~~lvG~S~Gg~ 77 (245)
T TIGR01738 4 NVHLVLIHGWGMNAE-VFRCLDEELSAHFTLHLVDLPGHGRSRGF-GPLSLADAAEAIAAQA----PDPAIWLGWSLGGL 77 (245)
T ss_pred CceEEEEcCCCCchh-hHHHHHHhhccCeEEEEecCCcCccCCCC-CCcCHHHHHHHHHHhC----CCCeEEEEEcHHHH
Confidence 489999999999999 99999999988899999999999998754 3456777777665543 36999999999999
Q ss_pred HHHHHHhhCccccccEEEecccCCCCchh--h----hHhhhh----cc------chhhh--hhccc-ccHHHHHHHHHhh
Q 024228 125 VGFKMAEMYPDLVESMVVTCSVMGLTESV--S----NAALER----IG------YESWV--DFLLP-KTADALKVQFDIA 185 (270)
Q Consensus 125 ~a~~~a~~~p~~v~~~i~~~~~~~~~~~~--~----~~~~~~----~~------~~~~~--~~~~~-~~~~~~~~~~~~~ 185 (270)
+++.+|.++|++++++|++++........ . ...... .. ..... ..... .............
T Consensus 78 ~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (245)
T TIGR01738 78 VALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFLALQTLGTPTARQDARALKQTL 157 (245)
T ss_pred HHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCccchHHHHHHHHh
Confidence 99999999999999999998765321100 0 000000 00 00000 00000 0000000000000
Q ss_pred ---------------hhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHh
Q 024228 186 ---------------CYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFV 250 (270)
Q Consensus 186 ---------------~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~ 250 (270)
...........+.++.+|+++++|++|.++|.+..+.+.+.++ ++++++++++||+++.++|++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~e~p~~ 236 (245)
T TIGR01738 158 LARPTPNVQVLQAGLEILATVDLRQPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLAP-HSELYIFAKAAHAPFLSHAEA 236 (245)
T ss_pred hccCCCCHHHHHHHHHHhhcccHHHHHhcCCCCEEEEeecCCcccCHHHHHHHHHhCC-CCeEEEeCCCCCCccccCHHH
Confidence 0000111123345666999999999999999999999998887 899999999999999999999
Q ss_pred HHHHHHHHH
Q 024228 251 YNRQLKTIL 259 (270)
Q Consensus 251 ~~~~i~~fl 259 (270)
+++.|.+|+
T Consensus 237 ~~~~i~~fi 245 (245)
T TIGR01738 237 FCALLVAFK 245 (245)
T ss_pred HHHHHHhhC
Confidence 999999985
No 32
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.98 E-value=8.8e-31 Score=205.78 Aligned_cols=238 Identities=21% Similarity=0.202 Sum_probs=160.7
Q ss_pred ceeEEEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccc-----------cHHHHHH---Hh-hccceEEeecCCCCCC
Q 024228 21 MTQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGIL-----------TWQFQVL---AL-AKTYEVYVPDFLFFGS 85 (270)
Q Consensus 21 ~~~~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~-----------~~~~~~~---~l-~~~~~v~~~d~~g~G~ 85 (270)
+......+ +|.+++|...|+ .++++||+||+.++... .|..++. .| +++|+|+++|+||||.
T Consensus 36 ~~~~~~~~-~~~~l~y~~~G~--~~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~ 112 (343)
T PRK08775 36 LSMRHAGL-EDLRLRYELIGP--AGAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADG 112 (343)
T ss_pred eeecCCCC-CCceEEEEEecc--CCCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCC
Confidence 34444444 688999988775 23457777666665541 4777775 56 4569999999999998
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHhCCCce-EEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhh--hHhhhh--
Q 024228 86 SVTDRPDRTASFQAECMAKGLRKLGVEKC-TLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVS--NAALER-- 160 (270)
Q Consensus 86 s~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~--~~~~~~-- 160 (270)
|.. ..++.+++++|+.+++++++.++. +|+||||||++|+.+|.++|++|+++|++++......... ......
T Consensus 113 s~~--~~~~~~~~a~dl~~ll~~l~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~~~~~~~~~~~~~~~~ 190 (343)
T PRK08775 113 SLD--VPIDTADQADAIALLLDALGIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHRAHPYAAAWRALQRRAV 190 (343)
T ss_pred CCC--CCCCHHHHHHHHHHHHHHcCCCcceEEEEECHHHHHHHHHHHHChHhhheEEEECccccCCHHHHHHHHHHHHHH
Confidence 853 346788899999999999998775 7999999999999999999999999999998654321110 000000
Q ss_pred -cc--------------------c---hhhhhhccccc-------HHHHHHHHHh---hhhcC------------CCChh
Q 024228 161 -IG--------------------Y---ESWVDFLLPKT-------ADALKVQFDI---ACYKL------------PTLPA 194 (270)
Q Consensus 161 -~~--------------------~---~~~~~~~~~~~-------~~~~~~~~~~---~~~~~------------~~~~~ 194 (270)
.. . ......+.... .......... ..... .....
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (343)
T PRK08775 191 ALGQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAEDYLDAAGAQYVARTPVNAYLRLSESIDLHR 270 (343)
T ss_pred HcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchHHHHHHHHHHHHHHhcChhHHHHHHHHHhhcC
Confidence 00 0 00000000000 0000000000 00000 00001
Q ss_pred hhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecC-CCcceeecchHhHHHHHHHHHHhhh
Q 024228 195 FVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEK-AGHLVNLERPFVYNRQLKTILASLV 263 (270)
Q Consensus 195 ~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~~i~~fl~~~~ 263 (270)
..+.++.+|+|+++|++|.++|++..+.+.+.++++.+++++++ +||.+++|+|+++++.|.+||++..
T Consensus 271 ~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p~a~l~~i~~~aGH~~~lE~Pe~~~~~l~~FL~~~~ 340 (343)
T PRK08775 271 VDPEAIRVPTVVVAVEGDRLVPLADLVELAEGLGPRGSLRVLRSPYGHDAFLKETDRIDAILTTALRSTG 340 (343)
T ss_pred CChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcCCCCeEEEEeCCccHHHHhcCHHHHHHHHHHHHHhcc
Confidence 12345669999999999999999999999988844899999985 9999999999999999999998764
No 33
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.98 E-value=9.5e-30 Score=202.63 Aligned_cols=233 Identities=14% Similarity=0.146 Sum_probs=154.3
Q ss_pred EEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCCC-C----hHHHHHHHHHHHH
Q 024228 33 ILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDR-T----ASFQAECMAKGLR 107 (270)
Q Consensus 33 ~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~-~----~~~~~~~~~~~l~ 107 (270)
.+.+....+..++|+||++||++++.. .|...+..|+++|+|+++|+||||.|+.+.... + .+.+++++.++++
T Consensus 93 ~~~~~~~~~~~~~p~vvllHG~~~~~~-~~~~~~~~L~~~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~ 171 (402)
T PLN02894 93 FINTVTFDSKEDAPTLVMVHGYGASQG-FFFRNFDALASRFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRK 171 (402)
T ss_pred eEEEEEecCCCCCCEEEEECCCCcchh-HHHHHHHHHHhCCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHH
Confidence 444433333346799999999999888 888888889888999999999999998654321 1 1235677888888
Q ss_pred HhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhh-H-hhh-----------hc---c--ch-----
Q 024228 108 KLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSN-A-ALE-----------RI---G--YE----- 164 (270)
Q Consensus 108 ~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~-~-~~~-----------~~---~--~~----- 164 (270)
.++.++++|+||||||.+++.+|.++|++|+++|+++|.......... . ... .. . ..
T Consensus 172 ~l~~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 251 (402)
T PLN02894 172 AKNLSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPAGFSSESDDKSEWLTKFRATWKGAVLNHLWESNFTPQKIIRG 251 (402)
T ss_pred HcCCCCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCccccCCcchhHHHHhhcchhHHHHHHHHHhhcCCCHHHHHHh
Confidence 888899999999999999999999999999999999876533211100 0 000 00 0 00
Q ss_pred ----------hhh-hhc---------ccccHHHHHHHHHhhh------------hc-----CCCChhhhhhhhheeeeEE
Q 024228 165 ----------SWV-DFL---------LPKTADALKVQFDIAC------------YK-----LPTLPAFVYKHILEKIHLL 207 (270)
Q Consensus 165 ----------~~~-~~~---------~~~~~~~~~~~~~~~~------------~~-----~~~~~~~~~~~~~~P~l~i 207 (270)
... ..+ .......+...+.... .. ........+.++.+|+++|
T Consensus 252 ~gp~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vP~liI 331 (402)
T PLN02894 252 LGPWGPNLVRRYTTARFGAHSTGDILSEEESKLLTDYVYHTLAAKASGELCLKYIFSFGAFARKPLLESASEWKVPTTFI 331 (402)
T ss_pred ccchhHHHHHHHHHHHhhhcccccccCcchhhHHHHHHHHhhcCCCchHHHHHHhccCchhhcchHhhhcccCCCCEEEE
Confidence 000 000 0000000100000000 00 0001112244456999999
Q ss_pred EcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHHhhhhhcc
Q 024228 208 WGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILASLVHANG 267 (270)
Q Consensus 208 ~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~~~~ 267 (270)
+|++|.+.+ .....+.+.....+++++++++||+++.|+|+++++.|.+|++.......
T Consensus 332 ~G~~D~i~~-~~~~~~~~~~~~~~~~~~i~~aGH~~~~E~P~~f~~~l~~~~~~~~~~~~ 390 (402)
T PLN02894 332 YGRHDWMNY-EGAVEARKRMKVPCEIIRVPQGGHFVFLDNPSGFHSAVLYACRKYLSPDR 390 (402)
T ss_pred EeCCCCCCc-HHHHHHHHHcCCCCcEEEeCCCCCeeeccCHHHHHHHHHHHHHHhccCCc
Confidence 999998765 55555665554368899999999999999999999999999987765533
No 34
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.97 E-value=1.9e-30 Score=204.51 Aligned_cols=230 Identities=19% Similarity=0.182 Sum_probs=158.0
Q ss_pred CCeEEEEEecCC--CCCCceEEEeCCCCCcccc----------cHHHHH---HHh-hccceEEeecCCC--CCCCCCC--
Q 024228 30 PGTILNIWVPKK--TTKKHAVVLLHPFGFDGIL----------TWQFQV---LAL-AKTYEVYVPDFLF--FGSSVTD-- 89 (270)
Q Consensus 30 ~g~~l~~~~~~~--~~~~~~vv~~hG~~~~~~~----------~~~~~~---~~l-~~~~~v~~~d~~g--~G~s~~~-- 89 (270)
+|.+++|...+. ..++++||++||++++... .|..++ ..| .++|+|+++|+|| ||.|...
T Consensus 14 ~~~~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~~ 93 (351)
T TIGR01392 14 SDVRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSSI 93 (351)
T ss_pred CCceEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCCC
Confidence 678899988875 2346899999999997641 367665 244 4559999999999 5555421
Q ss_pred --C--------CCCChHHHHHHHHHHHHHhCCCc-eEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhh--H
Q 024228 90 --R--------PDRTASFQAECMAKGLRKLGVEK-CTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSN--A 156 (270)
Q Consensus 90 --~--------~~~~~~~~~~~~~~~l~~~~~~~-~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~--~ 156 (270)
. ..++++++++++.+++++++.++ ++++||||||.+++.+|.++|++|+++|++++.......... .
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 173 (351)
T TIGR01392 94 NPGGRPYGSDFPLITIRDDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSARHSAWCIAFNE 173 (351)
T ss_pred CCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCcCCHHHHHHHH
Confidence 1 13688999999999999999998 999999999999999999999999999999987654321100 0
Q ss_pred -hhhhc-------------------cch--------------hhhhhccccc---------------HHHHHH-----HH
Q 024228 157 -ALERI-------------------GYE--------------SWVDFLLPKT---------------ADALKV-----QF 182 (270)
Q Consensus 157 -~~~~~-------------------~~~--------------~~~~~~~~~~---------------~~~~~~-----~~ 182 (270)
..... ... .....+.... ...+.. +.
T Consensus 174 ~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (351)
T TIGR01392 174 VQRQAILADPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAPQSGESPASGFDTRFQVESYLRYQGDKFV 253 (351)
T ss_pred HHHHHHHhCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCcccccccccccCccchHHHHHHHHHHHHH
Confidence 00000 000 0000000000 000100 00
Q ss_pred Hh----------hhhcC-C-----CChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEE-----EecCCCc
Q 024228 183 DI----------ACYKL-P-----TLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATME-----SIEKAGH 241 (270)
Q Consensus 183 ~~----------~~~~~-~-----~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~-----~~~~~gH 241 (270)
.. ..... . ......+.++.+|+|+|+|++|.++|++.++.+.+.++ +.+++ +++++||
T Consensus 254 ~~~d~~~~~~~~~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~-~~~~~v~~~~i~~~~GH 332 (351)
T TIGR01392 254 DRFDANSYLYLTRALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPPAESRELAKALP-AAGLRVTYVEIESPYGH 332 (351)
T ss_pred hhcCcchHHHHHHHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCHHHHHHHHHHHh-hcCCceEEEEeCCCCCc
Confidence 00 00000 0 00124455666999999999999999999999999998 66654 5578999
Q ss_pred ceeecchHhHHHHHHHHHH
Q 024228 242 LVNLERPFVYNRQLKTILA 260 (270)
Q Consensus 242 ~~~~~~~~~~~~~i~~fl~ 260 (270)
.+++++|+++++.|.+||+
T Consensus 333 ~~~le~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 333 DAFLVETDQVEELIRGFLR 351 (351)
T ss_pred chhhcCHHHHHHHHHHHhC
Confidence 9999999999999999984
No 35
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.97 E-value=1.4e-29 Score=201.93 Aligned_cols=229 Identities=24% Similarity=0.274 Sum_probs=163.3
Q ss_pred EEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHHHH
Q 024228 25 TIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAK 104 (270)
Q Consensus 25 ~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~ 104 (270)
.+.. ++..++|+..++ +++++|||+||++++.. .|..+.+.|.+.|+|+++|+||||.|.......+.+++++++.+
T Consensus 113 ~~~~-~~~~i~~~~~g~-~~~~~vl~~HG~~~~~~-~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~ 189 (371)
T PRK14875 113 KARI-GGRTVRYLRLGE-GDGTPVVLIHGFGGDLN-NWLFNHAALAAGRPVIALDLPGHGASSKAVGAGSLDELAAAVLA 189 (371)
T ss_pred cceE-cCcEEEEecccC-CCCCeEEEECCCCCccc-hHHHHHHHHhcCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHH
Confidence 3444 577788876665 44789999999999999 99999999988899999999999999766566889999999999
Q ss_pred HHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhh---Hhhhh---ccchhhhhh-cc------
Q 024228 105 GLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSN---AALER---IGYESWVDF-LL------ 171 (270)
Q Consensus 105 ~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~---~~~~~---~~~~~~~~~-~~------ 171 (270)
+++.++..+++++|||+||.+++.+|.++|+++.++|++++.......... ..... ......... ..
T Consensus 190 ~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (371)
T PRK14875 190 FLDALGIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGPEINGDYIDGFVAAESRRELKPVLELLFADPALVT 269 (371)
T ss_pred HHHhcCCccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCcccchhHHHHhhcccchhHHHHHHHHHhcChhhCC
Confidence 999999899999999999999999999999999999999876432211000 00000 000000000 00
Q ss_pred c------------cc-HHHHHHHHHhhhhcC---CCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEE
Q 024228 172 P------------KT-ADALKVQFDIACYKL---PTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMES 235 (270)
Q Consensus 172 ~------------~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~ 235 (270)
. .. ...+.... ...... .......+.++.+|+++++|++|.++|++..+.+ ..+.++.+
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~vp~~~~~~l----~~~~~~~~ 344 (371)
T PRK14875 270 RQMVEDLLKYKRLDGVDDALRALA-DALFAGGRQRVDLRDRLASLAIPVLVIWGEQDRIIPAAHAQGL----PDGVAVHV 344 (371)
T ss_pred HHHHHHHHHHhccccHHHHHHHHH-HHhccCcccchhHHHHHhcCCCCEEEEEECCCCccCHHHHhhc----cCCCeEEE
Confidence 0 00 00000000 000000 1111223445669999999999999998776543 33689999
Q ss_pred ecCCCcceeecchHhHHHHHHHHHHh
Q 024228 236 IEKAGHLVNLERPFVYNRQLKTILAS 261 (270)
Q Consensus 236 ~~~~gH~~~~~~~~~~~~~i~~fl~~ 261 (270)
++++||++++++|+++++.|.+||++
T Consensus 345 ~~~~gH~~~~e~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 345 LPGAGHMPQMEAAADVNRLLAEFLGK 370 (371)
T ss_pred eCCCCCChhhhCHHHHHHHHHHHhcc
Confidence 99999999999999999999999975
No 36
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.97 E-value=4.3e-29 Score=197.30 Aligned_cols=242 Identities=16% Similarity=0.173 Sum_probs=163.6
Q ss_pred eeEEEeecCCeEEEEEecCC--CCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCC-CCChHH
Q 024228 22 TQRTIEIEPGTILNIWVPKK--TTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRP-DRTASF 97 (270)
Q Consensus 22 ~~~~i~~~~g~~l~~~~~~~--~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~-~~~~~~ 97 (270)
....+..++|..+++....+ .+.+++||++||++++.. .|..+++.|++. |+|+++|+||||.|+.... ..+.+.
T Consensus 111 ~~~~~~~~~~~~l~~~~~~p~~~~~~~~Vl~lHG~~~~~~-~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~ 189 (395)
T PLN02652 111 ATSLFYGARRNALFCRSWAPAAGEMRGILIIIHGLNEHSG-RYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHGYVPSLDY 189 (395)
T ss_pred EEEEEECCCCCEEEEEEecCCCCCCceEEEEECCchHHHH-HHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCcCHHH
Confidence 34445555777887755443 245679999999999888 899999999876 9999999999999987543 257788
Q ss_pred HHHHHHHHHHHhCC----CceEEEEEchhHHHHHHHHhhCc---cccccEEEecccCCCCchhhh-Hhh----hh----c
Q 024228 98 QAECMAKGLRKLGV----EKCTLVGVSYGGMVGFKMAEMYP---DLVESMVVTCSVMGLTESVSN-AAL----ER----I 161 (270)
Q Consensus 98 ~~~~~~~~l~~~~~----~~~~l~G~S~Gg~~a~~~a~~~p---~~v~~~i~~~~~~~~~~~~~~-~~~----~~----~ 161 (270)
+.+|+.++++.+.. .+++++||||||.+++.++. +| ++++++|+.+|.......... ... .. .
T Consensus 190 ~~~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~~~~~~~~~~l~~~~~p~~ 268 (395)
T PLN02652 190 VVEDTEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPAHPIVGAVAPIFSLVAPRF 268 (395)
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccccchHHHHHHHHHHHHhCCCC
Confidence 89999999888742 37999999999999997765 55 479999999987543321100 000 00 0
Q ss_pred cchhhhhh--cccccHHHHHHHHHhhhhcCCCC--------------hhhhhhhhheeeeEEEcCCCccCCHHHHHHHHH
Q 024228 162 GYESWVDF--LLPKTADALKVQFDIACYKLPTL--------------PAFVYKHILEKIHLLWGENDKIFDMQVARNLKE 225 (270)
Q Consensus 162 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~ 225 (270)
........ ............+........+. ....+.++.+|+|+++|++|.++|++.++.+++
T Consensus 269 ~~~~~~~~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~L~~I~vPvLIi~G~~D~vvp~~~a~~l~~ 348 (395)
T PLN02652 269 QFKGANKRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKSVTVPFMVLHGTADRVTDPLASQDLYN 348 (395)
T ss_pred cccCcccccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHhhcccCCCCEEEEEeCCCCCCCHHHHHHHHH
Confidence 00000000 00000000000000000000000 011234455999999999999999999999998
Q ss_pred Hhc-CCceEEEecCCCcceeec-chHhHHHHHHHHHHhhhhh
Q 024228 226 QVG-QNATMESIEKAGHLVNLE-RPFVYNRQLKTILASLVHA 265 (270)
Q Consensus 226 ~~~-~~~~~~~~~~~gH~~~~~-~~~~~~~~i~~fl~~~~~~ 265 (270)
.+. .+.+++++++++|..+.+ .++++.+.+.+||+.+...
T Consensus 349 ~~~~~~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~~~~~ 390 (395)
T PLN02652 349 EAASRHKDIKLYDGFLHDLLFEPEREEVGRDIIDWMEKRLDL 390 (395)
T ss_pred hcCCCCceEEEECCCeEEeccCCCHHHHHHHHHHHHHHHhhc
Confidence 865 357899999999999876 7899999999999987653
No 37
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.97 E-value=1.1e-29 Score=191.56 Aligned_cols=213 Identities=27% Similarity=0.371 Sum_probs=150.3
Q ss_pred CceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCC--CCChHHHHHH-HHHHHHHhCCCceEEEEEch
Q 024228 45 KHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRP--DRTASFQAEC-MAKGLRKLGVEKCTLVGVSY 121 (270)
Q Consensus 45 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~--~~~~~~~~~~-~~~~l~~~~~~~~~l~G~S~ 121 (270)
+|+||++||++++.. .|..+++.|++.|+|+++|+||+|.|+.+.. ..+.++.+++ +..+++.++.++++++|||+
T Consensus 1 ~~~vv~~hG~~~~~~-~~~~~~~~L~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~ 79 (251)
T TIGR03695 1 KPVLVFLHGFLGSGA-DWQALIELLGPHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQLGIEPFFLVGYSM 79 (251)
T ss_pred CCEEEEEcCCCCchh-hHHHHHHHhcccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHcCCCeEEEEEecc
Confidence 478999999999999 9999999999669999999999999976542 4678888888 77788888888999999999
Q ss_pred hHHHHHHHHhhCccccccEEEecccCCCCchhhhHh-----------hhhccchhhhhh------------cccccH---
Q 024228 122 GGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAA-----------LERIGYESWVDF------------LLPKTA--- 175 (270)
Q Consensus 122 Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~------------~~~~~~--- 175 (270)
||.+++.+|.++|++|++++++++............ ............ ......
T Consensus 80 Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (251)
T TIGR03695 80 GGRIALYYALQYPERVQGLILESGSPGLATEEERAARRQNDEQLAQRFEQEGLEAFLDDWYQQPLFASQKNLPPEQRQAL 159 (251)
T ss_pred HHHHHHHHHHhCchheeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhcCccHHHHHHhcCceeeecccCChHHhHHH
Confidence 999999999999999999999988654332111000 000000000000 000000
Q ss_pred ---------HHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeec
Q 024228 176 ---------DALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLE 246 (270)
Q Consensus 176 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 246 (270)
......+..............+..+.+|+++++|++|..++ +..+.+.+..+ +.++++++++||+++++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~~~~~~~~~~~-~~~~~~~~~~gH~~~~e 237 (251)
T TIGR03695 160 RAKRLANNPEGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFV-QIAKEMQKLLP-NLTLVIIANAGHNIHLE 237 (251)
T ss_pred HHhcccccchHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchHHH-HHHHHHHhcCC-CCcEEEEcCCCCCcCcc
Confidence 00000000000001111122344566999999999998764 56667777776 89999999999999999
Q ss_pred chHhHHHHHHHHHH
Q 024228 247 RPFVYNRQLKTILA 260 (270)
Q Consensus 247 ~~~~~~~~i~~fl~ 260 (270)
+|+++++.|.+|++
T Consensus 238 ~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 238 NPEAFAKILLAFLE 251 (251)
T ss_pred ChHHHHHHHHHHhC
Confidence 99999999999983
No 38
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.97 E-value=3.9e-29 Score=226.67 Aligned_cols=254 Identities=20% Similarity=0.276 Sum_probs=174.4
Q ss_pred hhhhhcccCCceeEEEeecC-CeE--EEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCC
Q 024228 11 LLHGLLKLVGMTQRTIEIEP-GTI--LNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSV 87 (270)
Q Consensus 11 ~~~~~~~~~~~~~~~i~~~~-g~~--l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~ 87 (270)
......+..++....+.+.. |.. ++|...+..+++++|||+||++++.. .|..+++.|.+.|+|+++|+||||.|.
T Consensus 1334 ~~~~~~~~~~l~~~~~~v~~~~~~~~i~~~~~G~~~~~~~vVllHG~~~s~~-~w~~~~~~L~~~~rVi~~Dl~G~G~S~ 1412 (1655)
T PLN02980 1334 VIVRTFKEEQVRTYELRVDVDGFSCLIKVHEVGQNAEGSVVLFLHGFLGTGE-DWIPIMKAISGSARCISIDLPGHGGSK 1412 (1655)
T ss_pred HHHHHhccCCCceEEEEEccCceEEEEEEEecCCCCCCCeEEEECCCCCCHH-HHHHHHHHHhCCCEEEEEcCCCCCCCC
Confidence 33444555667777776653 322 33444454345789999999999999 999999999888999999999999997
Q ss_pred CCC--------CCCChHHHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhh
Q 024228 88 TDR--------PDRTASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALE 159 (270)
Q Consensus 88 ~~~--------~~~~~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~ 159 (270)
... ..++.+.+++++.+++++++.++++|+||||||.+++.++.++|++|+++|++++..............
T Consensus 1413 ~~~~~~~~~~~~~~si~~~a~~l~~ll~~l~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~~~~~~~~~ 1492 (1655)
T PLN02980 1413 IQNHAKETQTEPTLSVELVADLLYKLIEHITPGKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKDEVARKIRS 1492 (1655)
T ss_pred CccccccccccccCCHHHHHHHHHHHHHHhCCCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCchHHHHHHh
Confidence 542 236788999999999999999999999999999999999999999999999998754332211110000
Q ss_pred -----------hccchhhhh-hcccc------cHHHHHHHH----------------HhhhhcCCCChhhhhhhhheeee
Q 024228 160 -----------RIGYESWVD-FLLPK------TADALKVQF----------------DIACYKLPTLPAFVYKHILEKIH 205 (270)
Q Consensus 160 -----------~~~~~~~~~-~~~~~------~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~P~l 205 (270)
......... ++... ....+.... ..............+.++.+|+|
T Consensus 1493 ~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dl~~~L~~I~~PtL 1572 (1655)
T PLN02980 1493 AKDDSRARMLIDHGLEIFLENWYSGELWKSLRNHPHFNKIVASRLLHKDVPSLAKLLSDLSIGRQPSLWEDLKQCDTPLL 1572 (1655)
T ss_pred hhhhHHHHHHHhhhHHHHHHHhccHHHhhhhccCHHHHHHHHHHHhcCCHHHHHHHHHHhhhcccchHHHHHhhCCCCEE
Confidence 000000000 00000 000000000 00000001111234556669999
Q ss_pred EEEcCCCccCCHHHHHHHHHHhcC-----------CceEEEecCCCcceeecchHhHHHHHHHHHHhhhhhc
Q 024228 206 LLWGENDKIFDMQVARNLKEQVGQ-----------NATMESIEKAGHLVNLERPFVYNRQLKTILASLVHAN 266 (270)
Q Consensus 206 ~i~g~~D~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~~~ 266 (270)
+|+|++|..++ +.++.+.+.++. .+++++++++||++++|+|+++++.|.+||++....+
T Consensus 1573 lI~Ge~D~~~~-~~a~~~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~f~~~I~~FL~~~~~~~ 1643 (1655)
T PLN02980 1573 LVVGEKDVKFK-QIAQKMYREIGKSKESGNDKGKEIIEIVEIPNCGHAVHLENPLPVIRALRKFLTRLHNSS 1643 (1655)
T ss_pred EEEECCCCccH-HHHHHHHHHccccccccccccccceEEEEECCCCCchHHHCHHHHHHHHHHHHHhccccC
Confidence 99999999875 666777777662 1589999999999999999999999999999876543
No 39
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.97 E-value=9.7e-29 Score=191.44 Aligned_cols=232 Identities=18% Similarity=0.090 Sum_probs=152.9
Q ss_pred eeEEEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhc-cceEEeecCCCCCCCCCCCC--CCChHHH
Q 024228 22 TQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAK-TYEVYVPDFLFFGSSVTDRP--DRTASFQ 98 (270)
Q Consensus 22 ~~~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~-~~~v~~~d~~g~G~s~~~~~--~~~~~~~ 98 (270)
...++...+|.+++|...++ +++++||++||++++.. .+ .+...+.. .|+|+++|+||||.|+.... ..+.+++
T Consensus 5 ~~~~~~~~~~~~l~y~~~g~-~~~~~lvllHG~~~~~~-~~-~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 81 (306)
T TIGR01249 5 VSGYLNVSDNHQLYYEQSGN-PDGKPVVFLHGGPGSGT-DP-GCRRFFDPETYRIVLFDQRGCGKSTPHACLEENTTWDL 81 (306)
T ss_pred cCCeEEcCCCcEEEEEECcC-CCCCEEEEECCCCCCCC-CH-HHHhccCccCCEEEEECCCCCCCCCCCCCcccCCHHHH
Confidence 45678888899999988765 34678999999887765 43 34444543 49999999999999986542 3567889
Q ss_pred HHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhh-----------H----hhhhccc
Q 024228 99 AECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSN-----------A----ALERIGY 163 (270)
Q Consensus 99 ~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~-----------~----~~~~~~~ 163 (270)
++|+..++++++.++++++||||||.+++.++.++|++|+++|++++....+..... . .......
T Consensus 82 ~~dl~~l~~~l~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (306)
T TIGR01249 82 VADIEKLREKLGIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFLLREKEWSWFYEGGASMIYPDAWQRFMDSIPE 161 (306)
T ss_pred HHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHHChHhhhhheeeccccCCHHHHHHHHhcchhhhCHHHHHHHhhhCCh
Confidence 999999999999999999999999999999999999999999999876432211000 0 0000000
Q ss_pred h----hh----hhhcccccHH---HHHHHHHhhh----h----------------------------cCCCCh-----hh
Q 024228 164 E----SW----VDFLLPKTAD---ALKVQFDIAC----Y----------------------------KLPTLP-----AF 195 (270)
Q Consensus 164 ~----~~----~~~~~~~~~~---~~~~~~~~~~----~----------------------------~~~~~~-----~~ 195 (270)
. .. .......... .....+.... . ...... ..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (306)
T TIGR01249 162 NERNEQLVNAYHDRLQSGDEETKLAAAKAWVDWESTTLLRPINEIVSTAEDFKFSLAFARLENHYFVNKGFLDVENFILD 241 (306)
T ss_pred hhhhccHHHHHHHHccCCCHHHHHHHHHHHHHHhChhhcCCCCCccccccchHHHHHHHHHHHhHHHHhchhcCchHHHH
Confidence 0 00 0000000000 0000000000 0 000000 01
Q ss_pred hhhhh-heeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHH
Q 024228 196 VYKHI-LEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILA 260 (270)
Q Consensus 196 ~~~~~-~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 260 (270)
.+.++ .+|+|+++|++|.++|.+.++.+++.++ +.++++++++||.++.+. ..+.|.+|+.
T Consensus 242 ~~~~i~~~P~lii~g~~D~~~p~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~---~~~~i~~~~~ 303 (306)
T TIGR01249 242 NISKIRNIPTYIVHGRYDLCCPLQSAWALHKAFP-EAELKVTNNAGHSAFDPN---NLAALVHALE 303 (306)
T ss_pred hhhhccCCCeEEEecCCCCCCCHHHHHHHHHhCC-CCEEEEECCCCCCCCChH---HHHHHHHHHH
Confidence 12233 3899999999999999999999999998 899999999999986422 3345555544
No 40
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.97 E-value=2.7e-28 Score=185.88 Aligned_cols=243 Identities=19% Similarity=0.154 Sum_probs=169.3
Q ss_pred ceeEEEeecCCeEEEEEecCCCCC-CceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCC-CCCCC-CChH
Q 024228 21 MTQRTIEIEPGTILNIWVPKKTTK-KHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSV-TDRPD-RTAS 96 (270)
Q Consensus 21 ~~~~~i~~~~g~~l~~~~~~~~~~-~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~-~~~~~-~~~~ 96 (270)
..+..+...||..++|+......+ ..+||++||++.+.. .|..++..|... |.|+++|+||||.|. ...+. .++.
T Consensus 9 ~~~~~~~~~d~~~~~~~~~~~~~~~~g~Vvl~HG~~Eh~~-ry~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~~~~f~ 87 (298)
T COG2267 9 RTEGYFTGADGTRLRYRTWAAPEPPKGVVVLVHGLGEHSG-RYEELADDLAARGFDVYALDLRGHGRSPRGQRGHVDSFA 87 (298)
T ss_pred cccceeecCCCceEEEEeecCCCCCCcEEEEecCchHHHH-HHHHHHHHHHhCCCEEEEecCCCCCCCCCCCcCCchhHH
Confidence 445566666999999987766433 389999999999999 999999999988 999999999999997 33333 5688
Q ss_pred HHHHHHHHHHHHhC----CCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCc--hhhh-Hhhhhccchhhhh-
Q 024228 97 FQAECMAKGLRKLG----VEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTE--SVSN-AALERIGYESWVD- 168 (270)
Q Consensus 97 ~~~~~~~~~l~~~~----~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~--~~~~-~~~~~~~~~~~~~- 168 (270)
++.+|+.++++... ..+++++||||||.+++.++.+++.+|+++|+.+|...... .... .............
T Consensus 88 ~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~~~~~~~~~~~~~~~~~~~~p~ 167 (298)
T COG2267 88 DYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGGAILRLILARLALKLLGRIRPK 167 (298)
T ss_pred HHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCChhHHHHHHHHHhcccccccccc
Confidence 99999999998875 35899999999999999999999999999999999987663 1110 0000000000000
Q ss_pred ---------hcccccHH---HHHHHHHhhh----------------hcCCCChhhhhhhhheeeeEEEcCCCccCC-HHH
Q 024228 169 ---------FLLPKTAD---ALKVQFDIAC----------------YKLPTLPAFVYKHILEKIHLLWGENDKIFD-MQV 219 (270)
Q Consensus 169 ---------~~~~~~~~---~~~~~~~~~~----------------~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~~~ 219 (270)
........ ...+.+.... ...............+|+|+++|++|.+++ .+.
T Consensus 168 ~~~~~~~~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~PvLll~g~~D~vv~~~~~ 247 (298)
T COG2267 168 LPVDSNLLEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVPALRDAPAIALPVLLLQGGDDRVVDNVEG 247 (298)
T ss_pred cccCcccccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcccchhccccccCCEEEEecCCCccccCcHH
Confidence 00000000 0001110000 000000011122233999999999999999 688
Q ss_pred HHHHHHHhc-CCceEEEecCCCcceeecc-h--HhHHHHHHHHHHhhhh
Q 024228 220 ARNLKEQVG-QNATMESIEKAGHLVNLER-P--FVYNRQLKTILASLVH 264 (270)
Q Consensus 220 ~~~~~~~~~-~~~~~~~~~~~gH~~~~~~-~--~~~~~~i~~fl~~~~~ 264 (270)
..++.+... +++++++++|+.|..+.|. . +++.+.+.+|+.+...
T Consensus 248 ~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~~~~ 296 (298)
T COG2267 248 LARFFERAGSPDKELKVIPGAYHELLNEPDRAREEVLKDILAWLAEALP 296 (298)
T ss_pred HHHHHHhcCCCCceEEecCCcchhhhcCcchHHHHHHHHHHHHHHhhcc
Confidence 887877766 4679999999999998864 3 6788999999987643
No 41
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.97 E-value=3e-28 Score=177.29 Aligned_cols=242 Identities=17% Similarity=0.176 Sum_probs=169.1
Q ss_pred ceeEEEeecCCeEEEE--EecCC-CCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCC-CCh
Q 024228 21 MTQRTIEIEPGTILNI--WVPKK-TTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPD-RTA 95 (270)
Q Consensus 21 ~~~~~i~~~~g~~l~~--~~~~~-~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~-~~~ 95 (270)
....++..++|..+.. |.+.+ .+++..|+++||++......|+.++..|+.. |.|+++|++|||.|++.... .++
T Consensus 27 ~~~~~~~n~rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~~yi~~~ 106 (313)
T KOG1455|consen 27 YSESFFTNPRGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLHAYVPSF 106 (313)
T ss_pred eeeeeEEcCCCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCCcccCCcH
Confidence 3566677778988875 44433 2556789999999988743888899999988 99999999999999977655 788
Q ss_pred HHHHHHHHHHHHHhC------CCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhcc---chhh
Q 024228 96 SFQAECMAKGLRKLG------VEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIG---YESW 166 (270)
Q Consensus 96 ~~~~~~~~~~l~~~~------~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~---~~~~ 166 (270)
+..++|+....+... ..+.+++||||||.+++.++.+.|+..+++|+++|.....+.......-... ....
T Consensus 107 d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~p~v~~~l~~l~~l 186 (313)
T KOG1455|consen 107 DLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPHPPVISILTLLSKL 186 (313)
T ss_pred HHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCccCCCcHHHHHHHHHHHh
Confidence 899999998888642 2478999999999999999999999999999999987654433111100000 0000
Q ss_pred h-hhc-cccc--------HHHHHHHHHhhhhcC---------------CCChhhhhhhhheeeeEEEcCCCccCCHHHHH
Q 024228 167 V-DFL-LPKT--------ADALKVQFDIACYKL---------------PTLPAFVYKHILEKIHLLWGENDKIFDMQVAR 221 (270)
Q Consensus 167 ~-~~~-~~~~--------~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~ 221 (270)
. .+. .+.. ....++......... ...-...+.+..+|.+++||+.|.+..++.++
T Consensus 187 iP~wk~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~vtvPflilHG~dD~VTDp~~Sk 266 (313)
T KOG1455|consen 187 IPTWKIVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNEVTVPFLILHGTDDKVTDPKVSK 266 (313)
T ss_pred CCceeecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHHHhcccccccEEEEecCCCcccCcHHHH
Confidence 0 000 0000 000111111000000 00112223344499999999999999999999
Q ss_pred HHHHHhc-CCceEEEecCCCcceee----cchHhHHHHHHHHHHhh
Q 024228 222 NLKEQVG-QNATMESIEKAGHLVNL----ERPFVYNRQLKTILASL 262 (270)
Q Consensus 222 ~~~~~~~-~~~~~~~~~~~gH~~~~----~~~~~~~~~i~~fl~~~ 262 (270)
.+++... .+.++.++||+-|.... ++-+.+...|.+||++.
T Consensus 267 ~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 267 ELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred HHHHhccCCCCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 9999887 68999999999999985 34466788899999764
No 42
>PRK13604 luxD acyl transferase; Provisional
Probab=99.96 E-value=1.4e-27 Score=178.64 Aligned_cols=232 Identities=15% Similarity=0.166 Sum_probs=155.9
Q ss_pred eeEEEeecCCeEEEEEecCCC----CCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCC-CCCCCCCCCCCh
Q 024228 22 TQRTIEIEPGTILNIWVPKKT----TKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFF-GSSVTDRPDRTA 95 (270)
Q Consensus 22 ~~~~i~~~~g~~l~~~~~~~~----~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~-G~s~~~~~~~~~ 95 (270)
..+.+.+++|..|+.|...+. .+.++||+.||+++... .+..+++.|+++ |.|+.+|.||+ |.|++.....+.
T Consensus 10 ~~~~~~~~dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~~-~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~~~t~ 88 (307)
T PRK13604 10 IDHVICLENGQSIRVWETLPKENSPKKNNTILIASGFARRMD-HFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTIDEFTM 88 (307)
T ss_pred hhheEEcCCCCEEEEEEEcCcccCCCCCCEEEEeCCCCCChH-HHHHHHHHHHHCCCEEEEecCCCCCCCCCCccccCcc
Confidence 346678889999987665542 34588999999999887 799999999998 99999999988 999876555554
Q ss_pred HHHHHHHHHHHHHh---CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhc---cchhhhhh
Q 024228 96 SFQAECMAKGLRKL---GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERI---GYESWVDF 169 (270)
Q Consensus 96 ~~~~~~~~~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 169 (270)
.....|+.++++.+ +.++++|+||||||.+|+.+|... .++++|+.+|................ ........
T Consensus 89 s~g~~Dl~aaid~lk~~~~~~I~LiG~SmGgava~~~A~~~--~v~~lI~~sp~~~l~d~l~~~~~~~~~~~p~~~lp~~ 166 (307)
T PRK13604 89 SIGKNSLLTVVDWLNTRGINNLGLIAASLSARIAYEVINEI--DLSFLITAVGVVNLRDTLERALGYDYLSLPIDELPED 166 (307)
T ss_pred cccHHHHHHHHHHHHhcCCCceEEEEECHHHHHHHHHhcCC--CCCEEEEcCCcccHHHHHHHhhhcccccCcccccccc
Confidence 44567776666655 456899999999999997777643 39999999998775432221111000 00000000
Q ss_pred c-ccccHHHHHHHHHhhhhcC----CCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc-CCceEEEecCCCcce
Q 024228 170 L-LPKTADALKVQFDIACYKL----PTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG-QNATMESIEKAGHLV 243 (270)
Q Consensus 170 ~-~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~ 243 (270)
. ..........++.. .+.. ...+.....++.+|+|+|||++|.+||.+.++.+++.++ .++++++++|++|.+
T Consensus 167 ~d~~g~~l~~~~f~~~-~~~~~~~~~~s~i~~~~~l~~PvLiIHG~~D~lVp~~~s~~l~e~~~s~~kkl~~i~Ga~H~l 245 (307)
T PRK13604 167 LDFEGHNLGSEVFVTD-CFKHGWDTLDSTINKMKGLDIPFIAFTANNDSWVKQSEVIDLLDSIRSEQCKLYSLIGSSHDL 245 (307)
T ss_pred cccccccccHHHHHHH-HHhcCccccccHHHHHhhcCCCEEEEEcCCCCccCHHHHHHHHHHhccCCcEEEEeCCCcccc
Confidence 0 00000000122211 1111 112234455566999999999999999999999999886 579999999999988
Q ss_pred eecchHhHHHHHHHHHHhh
Q 024228 244 NLERPFVYNRQLKTILASL 262 (270)
Q Consensus 244 ~~~~~~~~~~~i~~fl~~~ 262 (270)
. +++- .+++|.++.
T Consensus 246 ~-~~~~----~~~~~~~~~ 259 (307)
T PRK13604 246 G-ENLV----VLRNFYQSV 259 (307)
T ss_pred C-cchH----HHHHHHHHH
Confidence 4 4432 344555544
No 43
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.96 E-value=7.9e-28 Score=166.75 Aligned_cols=211 Identities=22% Similarity=0.286 Sum_probs=154.0
Q ss_pred CceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHh---CCCceEEEEEc
Q 024228 45 KHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKL---GVEKCTLVGVS 120 (270)
Q Consensus 45 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~l~G~S 120 (270)
+.+||++||+.|+.. ..+.+.+.|.++ |.|.++.+||||.........+.++|.+++.+..+.+ +.+.|.++|.|
T Consensus 15 ~~AVLllHGFTGt~~-Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~t~~~DW~~~v~d~Y~~L~~~gy~eI~v~GlS 93 (243)
T COG1647 15 NRAVLLLHGFTGTPR-DVRMLGRYLNENGYTVYAPRYPGHGTLPEDFLKTTPRDWWEDVEDGYRDLKEAGYDEIAVVGLS 93 (243)
T ss_pred CEEEEEEeccCCCcH-HHHHHHHHHHHCCceEecCCCCCCCCCHHHHhcCCHHHHHHHHHHHHHHHHHcCCCeEEEEeec
Confidence 589999999999999 999999999999 9999999999998876556688888888877766655 67899999999
Q ss_pred hhHHHHHHHHhhCccccccEEEecccCCCCchh--hhHhhhhccchhhhhhcccccHHHHHHHHHhhhh----------c
Q 024228 121 YGGMVGFKMAEMYPDLVESMVVTCSVMGLTESV--SNAALERIGYESWVDFLLPKTADALKVQFDIACY----------K 188 (270)
Q Consensus 121 ~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~ 188 (270)
|||.+++.+|..+| ++++|.++++....... ........ ...+.........+.+.+..... .
T Consensus 94 mGGv~alkla~~~p--~K~iv~m~a~~~~k~~~~iie~~l~y~---~~~kk~e~k~~e~~~~e~~~~~~~~~~~~~~~~~ 168 (243)
T COG1647 94 MGGVFALKLAYHYP--PKKIVPMCAPVNVKSWRIIIEGLLEYF---RNAKKYEGKDQEQIDKEMKSYKDTPMTTTAQLKK 168 (243)
T ss_pred chhHHHHHHHhhCC--ccceeeecCCcccccchhhhHHHHHHH---HHhhhccCCCHHHHHHHHHHhhcchHHHHHHHHH
Confidence 99999999999998 99999999876532211 11111100 00111111111111111111100 0
Q ss_pred CCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc-CCceEEEecCCCcceeec-chHhHHHHHHHHHHh
Q 024228 189 LPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG-QNATMESIEKAGHLVNLE-RPFVYNRQLKTILAS 261 (270)
Q Consensus 189 ~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~-~~~~~~~~i~~fl~~ 261 (270)
........+..+..|++++.|.+|+++|.+.++.+.+... .+.++.+++++||....+ ..+.+.+.+..||+.
T Consensus 169 ~i~~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~SgHVIt~D~Erd~v~e~V~~FL~~ 243 (243)
T COG1647 169 LIKDARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGSGHVITLDKERDQVEEDVITFLEK 243 (243)
T ss_pred HHHHHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCCcceeEEEccCCceeecchhHHHHHHHHHHHhhC
Confidence 0001123345555999999999999999999999999876 568999999999999884 567899999999963
No 44
>PLN02511 hydrolase
Probab=99.96 E-value=9.3e-28 Score=190.58 Aligned_cols=244 Identities=13% Similarity=0.110 Sum_probs=157.6
Q ss_pred CceeEEEeecCCeEEEE-Eec----CCCCCCceEEEeCCCCCcccccH-HHHHHHhhc-cceEEeecCCCCCCCCCCCCC
Q 024228 20 GMTQRTIEIEPGTILNI-WVP----KKTTKKHAVVLLHPFGFDGILTW-QFQVLALAK-TYEVYVPDFLFFGSSVTDRPD 92 (270)
Q Consensus 20 ~~~~~~i~~~~g~~l~~-~~~----~~~~~~~~vv~~hG~~~~~~~~~-~~~~~~l~~-~~~v~~~d~~g~G~s~~~~~~ 92 (270)
..++..+.++||..+.+ |.. .....+|+||++||+++++...| ..++..+.+ +|+|+++|+||||.|......
T Consensus 70 ~~~re~l~~~DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~~~ 149 (388)
T PLN02511 70 RYRRECLRTPDGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTTPQ 149 (388)
T ss_pred ceeEEEEECCCCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCCcC
Confidence 35677888889988876 322 12245789999999988765234 456555544 499999999999999865444
Q ss_pred CChHHHHHHHHHHHHHhCC----CceEEEEEchhHHHHHHHHhhCccc--cccEEEecccCCCCchh---hh---Hhhhh
Q 024228 93 RTASFQAECMAKGLRKLGV----EKCTLVGVSYGGMVGFKMAEMYPDL--VESMVVTCSVMGLTESV---SN---AALER 160 (270)
Q Consensus 93 ~~~~~~~~~~~~~l~~~~~----~~~~l~G~S~Gg~~a~~~a~~~p~~--v~~~i~~~~~~~~~~~~---~~---~~~~~ 160 (270)
.....+.+|+.++++++.. .+++++||||||.+++.++.++|++ |.++++++++....... .. .....
T Consensus 150 ~~~~~~~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~~~~~~~~~~~~y~~ 229 (388)
T PLN02511 150 FYSASFTGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIADEDFHKGFNNVYDK 229 (388)
T ss_pred EEcCCchHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHHHHHHhccHHHHHHH
Confidence 3445667888888888754 5899999999999999999999987 88888887665421000 00 00000
Q ss_pred cc---chhhhh----hc-------------ccccHHHHHHHHHhhhhcC--------CCChhhhhhhhheeeeEEEcCCC
Q 024228 161 IG---YESWVD----FL-------------LPKTADALKVQFDIACYKL--------PTLPAFVYKHILEKIHLLWGEND 212 (270)
Q Consensus 161 ~~---~~~~~~----~~-------------~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~P~l~i~g~~D 212 (270)
.. ...... .+ .......+...+....... .......+.++.+|+|+|+|++|
T Consensus 230 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~t~~~~gf~~~~~yy~~~s~~~~L~~I~vPtLiI~g~dD 309 (388)
T PLN02511 230 ALAKALRKIFAKHALLFEGLGGEYNIPLVANAKTVRDFDDGLTRVSFGFKSVDAYYSNSSSSDSIKHVRVPLLCIQAAND 309 (388)
T ss_pred HHHHHHHHHHHHHHHHHhhCCCccCHHHHHhCCCHHHHHHhhhhhcCCCCCHHHHHHHcCchhhhccCCCCeEEEEcCCC
Confidence 00 000000 00 0000011111111100000 00112345566699999999999
Q ss_pred ccCCHHHH-HHHHHHhcCCceEEEecCCCcceeecchHh------HHHHHHHHHHhhhh
Q 024228 213 KIFDMQVA-RNLKEQVGQNATMESIEKAGHLVNLERPFV------YNRQLKTILASLVH 264 (270)
Q Consensus 213 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~------~~~~i~~fl~~~~~ 264 (270)
+++|.+.. ....+..+ ++++++++++||..++|+|+. +.+.+.+||+....
T Consensus 310 pi~p~~~~~~~~~~~~p-~~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~~~~ 367 (388)
T PLN02511 310 PIAPARGIPREDIKANP-NCLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEALEE 367 (388)
T ss_pred CcCCcccCcHhHHhcCC-CEEEEECCCcceeccccCCCCCCCCccHHHHHHHHHHHHHH
Confidence 99987654 34555566 899999999999999999865 58999999987654
No 45
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.96 E-value=6.5e-27 Score=186.48 Aligned_cols=235 Identities=11% Similarity=0.079 Sum_probs=154.6
Q ss_pred ceeEEEeecCCeEEEEE--ecCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHH
Q 024228 21 MTQRTIEIEPGTILNIW--VPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASF 97 (270)
Q Consensus 21 ~~~~~i~~~~g~~l~~~--~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~ 97 (270)
++...+...+|..+..+ .+...++.|+||+.||+.+.....|..+++.|+++ |+|+++|+||+|.|.......+...
T Consensus 168 ~e~v~i~~~~g~~l~g~l~~P~~~~~~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~~~~d~~~ 247 (414)
T PRK05077 168 LKELEFPIPGGGPITGFLHLPKGDGPFPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWKLTQDSSL 247 (414)
T ss_pred eEEEEEEcCCCcEEEEEEEECCCCCCccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCccccHHH
Confidence 56666776677667543 33332456777777777765433788888888887 9999999999999975433334444
Q ss_pred HHHHHHHHHHHh---CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhh--hHhhhhccchhhhhhc--
Q 024228 98 QAECMAKGLRKL---GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVS--NAALERIGYESWVDFL-- 170 (270)
Q Consensus 98 ~~~~~~~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-- 170 (270)
...++.+++... +.++++++|||+||++++.+|...|++|+++|+++++........ ...............+
T Consensus 248 ~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~~~~~~~~~p~~~~~~la~~lg~ 327 (414)
T PRK05077 248 LHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLTDPKRQQQVPEMYLDVLASRLGM 327 (414)
T ss_pred HHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccchhhcchhhhhhchHHHHHHHHHHhCC
Confidence 455566666554 567899999999999999999999999999999988754210000 0000000000000000
Q ss_pred ccccHHHHHHHHHhhhhcCCCChhh-hhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchH
Q 024228 171 LPKTADALKVQFDIACYKLPTLPAF-VYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPF 249 (270)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~ 249 (270)
.......+...+..... .... ...++.+|+|+|+|++|+++|.+.++.+.+..+ +.++++++++ ++.+.++
T Consensus 328 ~~~~~~~l~~~l~~~sl----~~~~~l~~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~~-~~~l~~i~~~---~~~e~~~ 399 (414)
T PRK05077 328 HDASDEALRVELNRYSL----KVQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLIASSSA-DGKLLEIPFK---PVYRNFD 399 (414)
T ss_pred CCCChHHHHHHhhhccc----hhhhhhccCCCCcEEEEecCCCCCCCHHHHHHHHHhCC-CCeEEEccCC---CccCCHH
Confidence 01111222221111110 0111 114566999999999999999999999888887 8999999985 4557999
Q ss_pred hHHHHHHHHHHhhh
Q 024228 250 VYNRQLKTILASLV 263 (270)
Q Consensus 250 ~~~~~i~~fl~~~~ 263 (270)
++.+.+.+||++..
T Consensus 400 ~~~~~i~~wL~~~l 413 (414)
T PRK05077 400 KALQEISDWLEDRL 413 (414)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999998753
No 46
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.96 E-value=1.8e-28 Score=167.15 Aligned_cols=239 Identities=17% Similarity=0.127 Sum_probs=174.1
Q ss_pred CceeEEEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc--ceEEeecCCCCCCCCCCCCCCChHH
Q 024228 20 GMTQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT--YEVYVPDFLFFGSSVTDRPDRTASF 97 (270)
Q Consensus 20 ~~~~~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~--~~v~~~d~~g~G~s~~~~~~~~~~~ 97 (270)
...+..+.+ +|.+++|...|. +...|++++|.-++....|.+.+..+.+. +.++++|.||+|.|.++...+..+.
T Consensus 20 ~~te~kv~v-ng~ql~y~~~G~--G~~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~f 96 (277)
T KOG2984|consen 20 DYTESKVHV-NGTQLGYCKYGH--GPNYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQF 96 (277)
T ss_pred hhhhheeee-cCceeeeeecCC--CCceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcccchHHH
Confidence 345666777 799999998887 45679999998887776888877766655 9999999999999998877766655
Q ss_pred H---HHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhh-------
Q 024228 98 Q---AECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWV------- 167 (270)
Q Consensus 98 ~---~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~------- 167 (270)
. +++...+++.++.+++.++|+|-||..|+.+|+++++.|.++|++++....................+.
T Consensus 97 f~~Da~~avdLM~aLk~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~ma~kgiRdv~kWs~r~R~P~ 176 (277)
T KOG2984|consen 97 FMKDAEYAVDLMEALKLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGAMAFKGIRDVNKWSARGRQPY 176 (277)
T ss_pred HHHhHHHHHHHHHHhCCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhHHHHhchHHHhhhhhhhcchH
Confidence 5 555677888999999999999999999999999999999999999887654332211111111111111
Q ss_pred -hhcccccHH-HHHHHHHh----hhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCc
Q 024228 168 -DFLLPKTAD-ALKVQFDI----ACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGH 241 (270)
Q Consensus 168 -~~~~~~~~~-~~~~~~~~----~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH 241 (270)
....++... ...++... .......+-...+.++.||+||++|+.|++++...+.-+....+ .+++.+++.++|
T Consensus 177 e~~Yg~e~f~~~wa~wvD~v~qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~~-~a~~~~~peGkH 255 (277)
T KOG2984|consen 177 EDHYGPETFRTQWAAWVDVVDQFHSFCDGRFCRLVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVLKS-LAKVEIHPEGKH 255 (277)
T ss_pred HHhcCHHHHHHHHHHHHHHHHHHhhcCCCchHhhhcccccCCeeEeeCCcCCCCCCCCccchhhhcc-cceEEEccCCCc
Confidence 111111111 11111111 11111223344556666999999999999999888888887776 899999999999
Q ss_pred ceeecchHhHHHHHHHHHHhh
Q 024228 242 LVNLERPFVYNRQLKTILASL 262 (270)
Q Consensus 242 ~~~~~~~~~~~~~i~~fl~~~ 262 (270)
.+++..+++|+..+.+||++.
T Consensus 256 n~hLrya~eFnklv~dFl~~~ 276 (277)
T KOG2984|consen 256 NFHLRYAKEFNKLVLDFLKST 276 (277)
T ss_pred ceeeechHHHHHHHHHHHhcc
Confidence 999999999999999999753
No 47
>PRK05855 short chain dehydrogenase; Validated
Probab=99.95 E-value=7.4e-27 Score=196.91 Aligned_cols=231 Identities=16% Similarity=0.139 Sum_probs=154.7
Q ss_pred cCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCC--CCCChHHHHHHHHHHH
Q 024228 29 EPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDR--PDRTASFQAECMAKGL 106 (270)
Q Consensus 29 ~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~--~~~~~~~~~~~~~~~l 106 (270)
.+|.+++|+..++ .++|+|||+||++++.. .|..+.+.|.+.|+|+++|+||||.|+... ..++.+++++|+.+++
T Consensus 10 ~~g~~l~~~~~g~-~~~~~ivllHG~~~~~~-~w~~~~~~L~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a~dl~~~i 87 (582)
T PRK05855 10 SDGVRLAVYEWGD-PDRPTVVLVHGYPDNHE-VWDGVAPLLADRFRVVAYDVRGAGRSSAPKRTAAYTLARLADDFAAVI 87 (582)
T ss_pred eCCEEEEEEEcCC-CCCCeEEEEcCCCchHH-HHHHHHHHhhcceEEEEecCCCCCCCCCCCcccccCHHHHHHHHHHHH
Confidence 4899999988875 34789999999999998 999999999777999999999999998654 3478999999999999
Q ss_pred HHhCCCc-eEEEEEchhHHHHHHHHhhC--ccccccEEEecccCCCCc-hhhh------------Hhhhhccchh-----
Q 024228 107 RKLGVEK-CTLVGVSYGGMVGFKMAEMY--PDLVESMVVTCSVMGLTE-SVSN------------AALERIGYES----- 165 (270)
Q Consensus 107 ~~~~~~~-~~l~G~S~Gg~~a~~~a~~~--p~~v~~~i~~~~~~~~~~-~~~~------------~~~~~~~~~~----- 165 (270)
++++..+ ++|+||||||.+++.++.+. ++++..++.++++..... .... ..........
T Consensus 88 ~~l~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (582)
T PRK05855 88 DAVSPDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPSLDHVGFWLRSGLRRPTPRRLARALGQLLRSWYIYLF 167 (582)
T ss_pred HHhCCCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCCchHHHHHHHhhcccccchhhhhHHHHHHhhhHHHHHH
Confidence 9998765 99999999999998887762 344555444443211000 0000 0000000000
Q ss_pred ----hhhhc-ccccHHHHHHHHHhh----------------------hhcC---CCChhhhhhhhheeeeEEEcCCCccC
Q 024228 166 ----WVDFL-LPKTADALKVQFDIA----------------------CYKL---PTLPAFVYKHILEKIHLLWGENDKIF 215 (270)
Q Consensus 166 ----~~~~~-~~~~~~~~~~~~~~~----------------------~~~~---~~~~~~~~~~~~~P~l~i~g~~D~~~ 215 (270)
..... ............... .+.. ..........+.+|+++|+|++|.++
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~v 247 (582)
T PRK05855 168 HLPVLPELLWRLGLGRAWPRLLRRVEGTPVDPIPTQTTLSDGAHGVKLYRANMIRSLSRPRERYTDVPVQLIVPTGDPYV 247 (582)
T ss_pred hCCCCcHHHhccchhhHHHHhhhhccCCCcchhhhhhhhccccchHHHHHhhhhhhhccCccCCccCceEEEEeCCCccc
Confidence 00000 000000000000000 0000 00000011224599999999999999
Q ss_pred CHHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHHhhh
Q 024228 216 DMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILASLV 263 (270)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 263 (270)
|++..+.+.+.++ +.++++++ +||+++.++|+++.+.|.+|+.+..
T Consensus 248 ~~~~~~~~~~~~~-~~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~~~~ 293 (582)
T PRK05855 248 RPALYDDLSRWVP-RLWRREIK-AGHWLPMSHPQVLAAAVAEFVDAVE 293 (582)
T ss_pred CHHHhccccccCC-cceEEEcc-CCCcchhhChhHHHHHHHHHHHhcc
Confidence 9999988888776 77888886 6999999999999999999998754
No 48
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.95 E-value=5.3e-26 Score=177.16 Aligned_cols=233 Identities=12% Similarity=0.147 Sum_probs=151.5
Q ss_pred eecCCeEEEEEecCCCCCCceEEEeCCCCCcccccH-------------------------HHHHHHhhcc-ceEEeecC
Q 024228 27 EIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTW-------------------------QFQVLALAKT-YEVYVPDF 80 (270)
Q Consensus 27 ~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~-------------------------~~~~~~l~~~-~~v~~~d~ 80 (270)
...||..|+++...+..++.+|+++||++.+....| ..+++.|.+. |.|+++|+
T Consensus 3 ~~~~g~~l~~~~~~~~~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~D~ 82 (332)
T TIGR01607 3 RNKDGLLLKTYSWIVKNAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGLDL 82 (332)
T ss_pred cCCCCCeEEEeeeeccCCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEecc
Confidence 445888888766554456789999999998875111 4578899887 99999999
Q ss_pred CCCCCCCCCCC---C-CChHHHHHHHHHHHHHhC------------------------CCceEEEEEchhHHHHHHHHhh
Q 024228 81 LFFGSSVTDRP---D-RTASFQAECMAKGLRKLG------------------------VEKCTLVGVSYGGMVGFKMAEM 132 (270)
Q Consensus 81 ~g~G~s~~~~~---~-~~~~~~~~~~~~~l~~~~------------------------~~~~~l~G~S~Gg~~a~~~a~~ 132 (270)
||||.|..... . .+++++++|+.++++.+. ..+++++||||||.+++.++.+
T Consensus 83 rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~~ 162 (332)
T TIGR01607 83 QGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLEL 162 (332)
T ss_pred cccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHHH
Confidence 99999985422 1 478889999998887642 2479999999999999999876
Q ss_pred Ccc--------ccccEEEecccCCCCch-------hh---hHhhh---hccchh-hhh-hcccccHHHHHHHHHhhhhcC
Q 024228 133 YPD--------LVESMVVTCSVMGLTES-------VS---NAALE---RIGYES-WVD-FLLPKTADALKVQFDIACYKL 189 (270)
Q Consensus 133 ~p~--------~v~~~i~~~~~~~~~~~-------~~---~~~~~---~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~ 189 (270)
+++ .++++|+++|....... .. ..... ...... ... ...... ....+.+....+..
T Consensus 163 ~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~Dp~~~ 241 (332)
T TIGR01607 163 LGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVFPTFRISKKIRYEKS-PYVNDIIKFDKFRY 241 (332)
T ss_pred hccccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHHHHHCCcccccCccccccC-hhhhhHHhcCcccc
Confidence 542 58999988876432110 00 00000 000000 000 000000 00000000000000
Q ss_pred -CCC--------------hhhhhhhh--heeeeEEEcCCCccCCHHHHHHHHHHhc-CCceEEEecCCCcceeecc-hHh
Q 024228 190 -PTL--------------PAFVYKHI--LEKIHLLWGENDKIFDMQVARNLKEQVG-QNATMESIEKAGHLVNLER-PFV 250 (270)
Q Consensus 190 -~~~--------------~~~~~~~~--~~P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~-~~~ 250 (270)
... .......+ .+|+|+++|++|.+++++.++.+++... ++.+++++++++|.++.|. .++
T Consensus 242 ~~~~s~~~~~~l~~~~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~~~l~~~~g~~H~i~~E~~~~~ 321 (332)
T TIGR01607 242 DGGITFNLASELIKATDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSISNKELHTLEDMDHVITIEPGNEE 321 (332)
T ss_pred CCcccHHHHHHHHHHHHHHHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccCCCcEEEEECCCCCCCccCCCHHH
Confidence 000 00112222 3899999999999999999998887764 3789999999999999875 688
Q ss_pred HHHHHHHHHH
Q 024228 251 YNRQLKTILA 260 (270)
Q Consensus 251 ~~~~i~~fl~ 260 (270)
+.+.|.+||+
T Consensus 322 v~~~i~~wL~ 331 (332)
T TIGR01607 322 VLKKIIEWIS 331 (332)
T ss_pred HHHHHHHHhh
Confidence 9999999985
No 49
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.95 E-value=8.5e-26 Score=167.22 Aligned_cols=222 Identities=18% Similarity=0.178 Sum_probs=159.2
Q ss_pred ecCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc--ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhC----C
Q 024228 38 VPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT--YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLG----V 111 (270)
Q Consensus 38 ~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~--~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~----~ 111 (270)
...+....|+++++||+.++.. .|..+...|++. ..++++|.|.||.|+.. ...+.+.+++|+..+|+..+ .
T Consensus 45 ~~~~~~~~Pp~i~lHGl~GS~~-Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~-~~h~~~~ma~dv~~Fi~~v~~~~~~ 122 (315)
T KOG2382|consen 45 SSENLERAPPAIILHGLLGSKE-NWRSVAKNLSRKLGRDVYAVDVRNHGSSPKI-TVHNYEAMAEDVKLFIDGVGGSTRL 122 (315)
T ss_pred cccccCCCCceEEecccccCCC-CHHHHHHHhcccccCceEEEecccCCCCccc-cccCHHHHHHHHHHHHHHccccccc
Confidence 3344457899999999999999 999999999988 89999999999999854 34568999999999999884 5
Q ss_pred CceEEEEEchhH-HHHHHHHhhCccccccEEEecccCCCCchhh---hHhhhhc---cch--------------------
Q 024228 112 EKCTLVGVSYGG-MVGFKMAEMYPDLVESMVVTCSVMGLTESVS---NAALERI---GYE-------------------- 164 (270)
Q Consensus 112 ~~~~l~G~S~Gg-~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~---~~~~~~~---~~~-------------------- 164 (270)
.++.++|||||| .+++..+...|+.+..+|+++..+...+... ......+ ...
T Consensus 123 ~~~~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~~~~~~rke~~~~l~~~~~d 202 (315)
T KOG2382|consen 123 DPVVLLGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYRELIKAMIQLDLSIGVSRGRKEALKSLIEVGFD 202 (315)
T ss_pred CCceecccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccchHHHHHHHHHhccccccccccHHHHHHHHHHHhcc
Confidence 689999999999 7788888889999999999876653111110 0000000 000
Q ss_pred -----hhhhhcc----------cccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcC
Q 024228 165 -----SWVDFLL----------PKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQ 229 (270)
Q Consensus 165 -----~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~ 229 (270)
.....+. ......+.+++........|..... ..+..||+++.|.++.+++.+.-.++...++
T Consensus 203 ~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~-~~~~~pvlfi~g~~S~fv~~~~~~~~~~~fp- 280 (315)
T KOG2382|consen 203 NLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLED-GPYTGPVLFIKGLQSKFVPDEHYPRMEKIFP- 280 (315)
T ss_pred hHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccc-cccccceeEEecCCCCCcChhHHHHHHHhcc-
Confidence 0000000 0001112222221111111111111 3344899999999999999999999999998
Q ss_pred CceEEEecCCCcceeecchHhHHHHHHHHHHhhh
Q 024228 230 NATMESIEKAGHLVNLERPFVYNRQLKTILASLV 263 (270)
Q Consensus 230 ~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 263 (270)
.+++++++++||+.+.|+|+++.+.|.+|+.+..
T Consensus 281 ~~e~~~ld~aGHwVh~E~P~~~~~~i~~Fl~~~~ 314 (315)
T KOG2382|consen 281 NVEVHELDEAGHWVHLEKPEEFIESISEFLEEPE 314 (315)
T ss_pred chheeecccCCceeecCCHHHHHHHHHHHhcccC
Confidence 8999999999999999999999999999997653
No 50
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.94 E-value=2.4e-24 Score=169.80 Aligned_cols=231 Identities=16% Similarity=0.161 Sum_probs=156.8
Q ss_pred CeEEEEEecCCC--CCCceEEEeCCCCCccc------------ccHHHHH---HHhhcc-ceEEeecCCCCCCCCCC---
Q 024228 31 GTILNIWVPKKT--TKKHAVVLLHPFGFDGI------------LTWQFQV---LALAKT-YEVYVPDFLFFGSSVTD--- 89 (270)
Q Consensus 31 g~~l~~~~~~~~--~~~~~vv~~hG~~~~~~------------~~~~~~~---~~l~~~-~~v~~~d~~g~G~s~~~--- 89 (270)
..++.|...|.. ...++||+.|++.+++. ..|..++ ..|..+ |-||++|..|.|.|..+
T Consensus 40 ~~~~~Y~t~G~ln~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~g 119 (389)
T PRK06765 40 DVQMGYETYGTLNRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNVI 119 (389)
T ss_pred CceEEEEeccccCCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCCC
Confidence 356788888763 34589999999988642 0266554 345555 99999999988753211
Q ss_pred ------------------CCCCChHHHHHHHHHHHHHhCCCceE-EEEEchhHHHHHHHHhhCccccccEEEecccCCCC
Q 024228 90 ------------------RPDRTASFQAECMAKGLRKLGVEKCT-LVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLT 150 (270)
Q Consensus 90 ------------------~~~~~~~~~~~~~~~~l~~~~~~~~~-l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~ 150 (270)
.+.++.+++++++.+++++++++++. ++||||||++++.+|.++|++|+++|++++.....
T Consensus 120 ~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~~~~~ 199 (389)
T PRK06765 120 TTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGNPQND 199 (389)
T ss_pred CCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEecCCCCC
Confidence 12368899999999999999999986 99999999999999999999999999998765433
Q ss_pred chh-h--hH-hhhhc-------------------cch--------------hhhhhcccc---c---------HHHHHHH
Q 024228 151 ESV-S--NA-ALERI-------------------GYE--------------SWVDFLLPK---T---------ADALKVQ 181 (270)
Q Consensus 151 ~~~-~--~~-~~~~~-------------------~~~--------------~~~~~~~~~---~---------~~~~~~~ 181 (270)
... . .. ....+ +.. .+...+... . ......+
T Consensus 200 ~~~~~~~~~~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~~~~~~~~~~~~~~~e~y 279 (389)
T PRK06765 200 AWTSVNVLQNWAEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASIEVDPYEKVSTLTSFEKE 279 (389)
T ss_pred hhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCccccccccccccchhhHHHH
Confidence 221 0 00 00000 000 000000000 0 0000011
Q ss_pred HHhh---------------------hhc--C-CCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc---CCceEE
Q 024228 182 FDIA---------------------CYK--L-PTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG---QNATME 234 (270)
Q Consensus 182 ~~~~---------------------~~~--~-~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~ 234 (270)
+... .+. . .......+..+.+|+|+|+|++|.++|++..+.+.+.++ .+++++
T Consensus 280 l~~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~~~a~l~ 359 (389)
T PRK06765 280 INKATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQPPRYNYKMVDILQKQGKYAEVY 359 (389)
T ss_pred HHHHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhcCCCeEEE
Confidence 1000 000 0 001233455566999999999999999999999998886 268999
Q ss_pred EecC-CCcceeecchHhHHHHHHHHHHh
Q 024228 235 SIEK-AGHLVNLERPFVYNRQLKTILAS 261 (270)
Q Consensus 235 ~~~~-~gH~~~~~~~~~~~~~i~~fl~~ 261 (270)
++++ +||..++++|+++++.|.+||++
T Consensus 360 ~I~s~~GH~~~le~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 360 EIESINGHMAGVFDIHLFEKKIYEFLNR 387 (389)
T ss_pred EECCCCCcchhhcCHHHHHHHHHHHHcc
Confidence 9985 89999999999999999999975
No 51
>PRK10985 putative hydrolase; Provisional
Probab=99.94 E-value=4.3e-24 Score=166.51 Aligned_cols=242 Identities=14% Similarity=0.084 Sum_probs=148.2
Q ss_pred ceeEEEeecCCeEEEEEec-C--CCCCCceEEEeCCCCCcccc-cHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCCh
Q 024228 21 MTQRTIEIEPGTILNIWVP-K--KTTKKHAVVLLHPFGFDGIL-TWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTA 95 (270)
Q Consensus 21 ~~~~~i~~~~g~~l~~~~~-~--~~~~~~~vv~~hG~~~~~~~-~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~ 95 (270)
.+.+.++++||..+.+... . ...++|+||++||++++... .+..+++.|.+. |+|+++|+||||.+.........
T Consensus 31 ~~~~~~~~~dg~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~~~~ 110 (324)
T PRK10985 31 PYWQRLELPDGDFVDLAWSEDPAQARHKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHRIYH 110 (324)
T ss_pred cceeEEECCCCCEEEEecCCCCccCCCCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcceEC
Confidence 3566788889987765322 2 22357899999999887551 345678888887 99999999999987543222111
Q ss_pred HHHHHHHHHHH----HHhCCCceEEEEEchhHHHHHHHHhhCccc--cccEEEecccCCCCchhh------hHhhhhccc
Q 024228 96 SFQAECMAKGL----RKLGVEKCTLVGVSYGGMVGFKMAEMYPDL--VESMVVTCSVMGLTESVS------NAALERIGY 163 (270)
Q Consensus 96 ~~~~~~~~~~l----~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~--v~~~i~~~~~~~~~~~~~------~~~~~~~~~ 163 (270)
....+|+..++ +.++..+++++||||||.+++.++.++++. +.++|+++++........ .........
T Consensus 111 ~~~~~D~~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~~~~~~~~~~~~~~~l~ 190 (324)
T PRK10985 111 SGETEDARFFLRWLQREFGHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACSYRMEQGFSRVYQRYLL 190 (324)
T ss_pred CCchHHHHHHHHHHHHhCCCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHHHHHhhhHHHHHHHHHH
Confidence 11234444433 345667899999999999988888877543 889999988765321110 000000000
Q ss_pred hhh-------hhhcc---cccHHHH---------HHHHHhhh--hc------CCCChhhhhhhhheeeeEEEcCCCccCC
Q 024228 164 ESW-------VDFLL---PKTADAL---------KVQFDIAC--YK------LPTLPAFVYKHILEKIHLLWGENDKIFD 216 (270)
Q Consensus 164 ~~~-------~~~~~---~~~~~~~---------~~~~~~~~--~~------~~~~~~~~~~~~~~P~l~i~g~~D~~~~ 216 (270)
... ..... ......+ ...+.... +. ........+.++.+|+++|+|++|++++
T Consensus 191 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~g~~~~~~~y~~~~~~~~l~~i~~P~lii~g~~D~~~~ 270 (324)
T PRK10985 191 NLLKANAARKLAAYPGTLPINLAQLKSVRRLREFDDLITARIHGFADAIDYYRQCSALPLLNQIRKPTLIIHAKDDPFMT 270 (324)
T ss_pred HHHHHHHHHHHHhccccccCCHHHHhcCCcHHHHhhhheeccCCCCCHHHHHHHCChHHHHhCCCCCEEEEecCCCCCCC
Confidence 000 00000 0000000 00000000 00 0111223445566999999999999999
Q ss_pred HHHHHHHHHHhcCCceEEEecCCCcceeecch-----HhHHHHHHHHHHhhh
Q 024228 217 MQVARNLKEQVGQNATMESIEKAGHLVNLERP-----FVYNRQLKTILASLV 263 (270)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~-----~~~~~~i~~fl~~~~ 263 (270)
++....+.+..+ +.++++++++||+.+++.. ....+.+.+|+....
T Consensus 271 ~~~~~~~~~~~~-~~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~~~~ 321 (324)
T PRK10985 271 HEVIPKPESLPP-NVEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLTTYL 321 (324)
T ss_pred hhhChHHHHhCC-CeEEEECCCCCceeeCCCCCCCCCccHHHHHHHHHHHhh
Confidence 888877766665 8899999999999998642 356778888886553
No 52
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.93 E-value=1.1e-23 Score=160.35 Aligned_cols=225 Identities=11% Similarity=0.039 Sum_probs=139.0
Q ss_pred CCeEEEE--EecCCCCCCceEEEeCCCCC----cccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHH
Q 024228 30 PGTILNI--WVPKKTTKKHAVVLLHPFGF----DGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECM 102 (270)
Q Consensus 30 ~g~~l~~--~~~~~~~~~~~vv~~hG~~~----~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~ 102 (270)
+|..+.- ..+.+ .++++||++||++. +.. .|..+++.|++. |.|+++|+||||.|.... .+.+.+.+|+
T Consensus 10 ~~~~l~g~~~~p~~-~~~~~vv~i~gg~~~~~g~~~-~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~--~~~~~~~~d~ 85 (274)
T TIGR03100 10 EGETLVGVLHIPGA-SHTTGVLIVVGGPQYRVGSHR-QFVLLARRLAEAGFPVLRFDYRGMGDSEGEN--LGFEGIDADI 85 (274)
T ss_pred CCcEEEEEEEcCCC-CCCCeEEEEeCCccccCCchh-HHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC--CCHHHHHHHH
Confidence 5666543 33332 34567888887653 223 466778899887 999999999999987542 4667778888
Q ss_pred HHHHHHh-----CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccc-----hhh-hhhcc
Q 024228 103 AKGLRKL-----GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGY-----ESW-VDFLL 171 (270)
Q Consensus 103 ~~~l~~~-----~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~ 171 (270)
.++++.+ +.++++++|||+||.+++.+|.. +++|+++|+++|.................. ... .....
T Consensus 86 ~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (274)
T TIGR03100 86 AAAIDAFREAAPHLRRIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVRTEAAQAASRIRHYYLGQLLSADFWRKLLS 164 (274)
T ss_pred HHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhh-CCCccEEEEECCccCCcccchHHHHHHHHHHHHhChHHHHHhcC
Confidence 8888776 45679999999999999999765 457999999998754322111111110000 000 00010
Q ss_pred ccc-HHHHHHHHHh----h-hhcC----CCChh---hhhhhhheeeeEEEcCCCccCCHHHH------HHHHHHhc-CCc
Q 024228 172 PKT-ADALKVQFDI----A-CYKL----PTLPA---FVYKHILEKIHLLWGENDKIFDMQVA------RNLKEQVG-QNA 231 (270)
Q Consensus 172 ~~~-~~~~~~~~~~----~-~~~~----~~~~~---~~~~~~~~P~l~i~g~~D~~~~~~~~------~~~~~~~~-~~~ 231 (270)
... .......+.. . .... ..... ..+..+.+|+++++|+.|...+ ... ..+.+.+. .++
T Consensus 165 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~P~ll~~g~~D~~~~-~~~~~~~~~~~~~~~l~~~~v 243 (274)
T TIGR03100 165 GEVNLGSSLRGLGDALLKARQKGDEVAHGGLAERMKAGLERFQGPVLFILSGNDLTAQ-EFADSVLGEPAWRGALEDPGI 243 (274)
T ss_pred CCccHHHHHHHHHHHHHhhhhcCCCcccchHHHHHHHHHHhcCCcEEEEEcCcchhHH-HHHHHhccChhhHHHhhcCCe
Confidence 000 0000111111 0 0000 00111 1223445899999999998864 222 44555452 389
Q ss_pred eEEEecCCCcceeec-chHhHHHHHHHHHH
Q 024228 232 TMESIEKAGHLVNLE-RPFVYNRQLKTILA 260 (270)
Q Consensus 232 ~~~~~~~~gH~~~~~-~~~~~~~~i~~fl~ 260 (270)
+++.+++++|++..+ .++++.+.|.+||+
T Consensus 244 ~~~~~~~~~H~l~~e~~~~~v~~~i~~wL~ 273 (274)
T TIGR03100 244 ERVEIDGADHTFSDRVWREWVAARTTEWLR 273 (274)
T ss_pred EEEecCCCCcccccHHHHHHHHHHHHHHHh
Confidence 999999999988554 45889999999996
No 53
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.93 E-value=3e-25 Score=153.22 Aligned_cols=221 Identities=14% Similarity=0.146 Sum_probs=161.9
Q ss_pred eeEEEeecCCeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc--ceEEeecCCCCCCCCCCCCCCChHHHH
Q 024228 22 TQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT--YEVYVPDFLFFGSSVTDRPDRTASFQA 99 (270)
Q Consensus 22 ~~~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~--~~v~~~d~~g~G~s~~~~~~~~~~~~~ 99 (270)
++..+.+.|..+++-|...++.+.|+++++|+..++.+ .....+..+-.+ .+|+.+++||+|.|++.+.+... .
T Consensus 55 e~i~l~T~D~vtL~a~~~~~E~S~pTlLyfh~NAGNmG-hr~~i~~~fy~~l~mnv~ivsYRGYG~S~GspsE~GL---~ 130 (300)
T KOG4391|consen 55 ERIELRTRDKVTLDAYLMLSESSRPTLLYFHANAGNMG-HRLPIARVFYVNLKMNVLIVSYRGYGKSEGSPSEEGL---K 130 (300)
T ss_pred eEEEEEcCcceeEeeeeecccCCCceEEEEccCCCccc-chhhHHHHHHHHcCceEEEEEeeccccCCCCccccce---e
Confidence 45556667899997665556668999999999999998 777777665554 89999999999999977655433 3
Q ss_pred HHHHHHHHHh------CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhcccc
Q 024228 100 ECMAKGLRKL------GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPK 173 (270)
Q Consensus 100 ~~~~~~l~~~------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (270)
-|-.++++.+ +..+++++|.|.||.+|..+|+++.+++.++|+-+.+...+....... .+-
T Consensus 131 lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp~~~i~~v-------------~p~ 197 (300)
T KOG4391|consen 131 LDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIPHMAIPLV-------------FPF 197 (300)
T ss_pred ccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeechhccchhhhhhee-------------ccc
Confidence 3444455544 456899999999999999999999999999999988766432221110 000
Q ss_pred cHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc-CCceEEEecCCCcceeecchHhHH
Q 024228 174 TADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG-QNATMESIEKAGHLVNLERPFVYN 252 (270)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~~~~~ 252 (270)
..+.+....+...|...........|.|++.|.+|.+||+.+.+.+++..+ ...++.++|++.|...+-. +-+.
T Consensus 198 ----~~k~i~~lc~kn~~~S~~ki~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~Krl~eFP~gtHNDT~i~-dGYf 272 (300)
T KOG4391|consen 198 ----PMKYIPLLCYKNKWLSYRKIGQCRMPFLFISGLKDELVPPVMMRQLYELCPSRTKRLAEFPDGTHNDTWIC-DGYF 272 (300)
T ss_pred ----hhhHHHHHHHHhhhcchhhhccccCceEEeecCccccCCcHHHHHHHHhCchhhhhheeCCCCccCceEEe-ccHH
Confidence 012222222333333334444455899999999999999999999999988 4678999999999987644 3477
Q ss_pred HHHHHHHHhhhh
Q 024228 253 RQLKTILASLVH 264 (270)
Q Consensus 253 ~~i~~fl~~~~~ 264 (270)
+.|.+||.+...
T Consensus 273 q~i~dFlaE~~~ 284 (300)
T KOG4391|consen 273 QAIEDFLAEVVK 284 (300)
T ss_pred HHHHHHHHHhcc
Confidence 999999987653
No 54
>PLN02872 triacylglycerol lipase
Probab=99.93 E-value=7.2e-24 Score=167.03 Aligned_cols=245 Identities=18% Similarity=0.209 Sum_probs=158.8
Q ss_pred CCceeEEEeecCCeEEEEEecCCC------CCCceEEEeCCCCCcccccHH------HHHHHhhcc-ceEEeecCCCCCC
Q 024228 19 VGMTQRTIEIEPGTILNIWVPKKT------TKKHAVVLLHPFGFDGILTWQ------FQVLALAKT-YEVYVPDFLFFGS 85 (270)
Q Consensus 19 ~~~~~~~i~~~~g~~l~~~~~~~~------~~~~~vv~~hG~~~~~~~~~~------~~~~~l~~~-~~v~~~d~~g~G~ 85 (270)
-..+++.++++||..|.+...... .++|+|+++||+++++. .|. .++..|+++ |+|+++|+||++.
T Consensus 42 y~~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~-~w~~~~~~~sla~~La~~GydV~l~n~RG~~~ 120 (395)
T PLN02872 42 YSCTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGD-AWFLNSPEQSLGFILADHGFDVWVGNVRGTRW 120 (395)
T ss_pred CCceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCccccccc-ceeecCcccchHHHHHhCCCCccccccccccc
Confidence 357899999999999987553211 23689999999998887 773 345567776 9999999999876
Q ss_pred CCCC-------C--CCCChHHHH-HHHHHHHHHh---CCCceEEEEEchhHHHHHHHHhhCcc---ccccEEEecccCCC
Q 024228 86 SVTD-------R--PDRTASFQA-ECMAKGLRKL---GVEKCTLVGVSYGGMVGFKMAEMYPD---LVESMVVTCSVMGL 149 (270)
Q Consensus 86 s~~~-------~--~~~~~~~~~-~~~~~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~---~v~~~i~~~~~~~~ 149 (270)
|... . .+++.++++ .|+.++++.+ ..++++++|||+||.+++.++ .+|+ +|+.+++++|....
T Consensus 121 s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P~~~~ 199 (395)
T PLN02872 121 SYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSITNSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCPISYL 199 (395)
T ss_pred ccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhccCCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcchhhh
Confidence 5321 1 135777777 7999999986 347899999999999998555 5675 68888888887543
Q ss_pred Cc---hhhhH--------hhhhccchh----------hhhh--------------cc--------------------ccc
Q 024228 150 TE---SVSNA--------ALERIGYES----------WVDF--------------LL--------------------PKT 174 (270)
Q Consensus 150 ~~---~~~~~--------~~~~~~~~~----------~~~~--------------~~--------------------~~~ 174 (270)
.. ..... .....+... .... +. ..+
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~C~~~~~c~~~~~~~~g~~~~~n~~~~~~~~~~~pagtS 279 (395)
T PLN02872 200 DHVTAPLVLRMVFMHLDQMVVAMGIHQLNFRSDVLVKLLDSICEGHMDCNDLLTSITGTNCCFNASRIDYYLEYEPHPSS 279 (395)
T ss_pred ccCCCHHHHHHHHHhHHHHHHHhcCceecCCcHHHHHHHHHHccCchhHHHHHHHHhCCCcccchhhhhHHHhcCCCcch
Confidence 21 11000 000000000 0000 00 000
Q ss_pred HHH---HHHHHHhhhhcC--------------CCChhhhhhhh--heeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEE
Q 024228 175 ADA---LKVQFDIACYKL--------------PTLPAFVYKHI--LEKIHLLWGENDKIFDMQVARNLKEQVGQNATMES 235 (270)
Q Consensus 175 ~~~---~~~~~~~~~~~~--------------~~~~~~~~~~~--~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~ 235 (270)
... +.+.+....++. ...|.-.+.++ .+|+++++|++|.+++++.++.+.+.++...+++.
T Consensus 280 ~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~~~~l~~ 359 (395)
T PLN02872 280 VKNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVTDVEHTLAELPSKPELLY 359 (395)
T ss_pred HHHHHHHHHHHhcCCcccCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCCHHHHHHHHHHCCCccEEEE
Confidence 000 001111110100 01111112222 16999999999999999999999999984368889
Q ss_pred ecCCCccee---ecchHhHHHHHHHHHHhhhhh
Q 024228 236 IEKAGHLVN---LERPFVYNRQLKTILASLVHA 265 (270)
Q Consensus 236 ~~~~gH~~~---~~~~~~~~~~i~~fl~~~~~~ 265 (270)
+++++|..+ .+.++++.+.|.+|+++....
T Consensus 360 l~~~gH~dfi~~~eape~V~~~Il~fL~~~~~~ 392 (395)
T PLN02872 360 LENYGHIDFLLSTSAKEDVYNHMIQFFRSLGKS 392 (395)
T ss_pred cCCCCCHHHHhCcchHHHHHHHHHHHHHHhhhc
Confidence 999999744 388999999999999876543
No 55
>PRK11071 esterase YqiA; Provisional
Probab=99.93 E-value=1.3e-23 Score=150.58 Aligned_cols=183 Identities=18% Similarity=0.096 Sum_probs=125.5
Q ss_pred ceEEEeCCCCCcccccHHH--HHHHhhc---cceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEEc
Q 024228 46 HAVVLLHPFGFDGILTWQF--QVLALAK---TYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVS 120 (270)
Q Consensus 46 ~~vv~~hG~~~~~~~~~~~--~~~~l~~---~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~G~S 120 (270)
|+||++||++++.. .|.. +.+.+.+ +|+|+++|+||++ ++.++++.+++++++.++++++|||
T Consensus 2 p~illlHGf~ss~~-~~~~~~~~~~l~~~~~~~~v~~~dl~g~~-----------~~~~~~l~~l~~~~~~~~~~lvG~S 69 (190)
T PRK11071 2 STLLYLHGFNSSPR-SAKATLLKNWLAQHHPDIEMIVPQLPPYP-----------ADAAELLESLVLEHGGDPLGLVGSS 69 (190)
T ss_pred CeEEEECCCCCCcc-hHHHHHHHHHHHHhCCCCeEEeCCCCCCH-----------HHHHHHHHHHHHHcCCCCeEEEEEC
Confidence 68999999999999 8874 4466654 4999999999884 4578899999999998999999999
Q ss_pred hhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhh
Q 024228 121 YGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHI 200 (270)
Q Consensus 121 ~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (270)
+||.+++.+|.++|. .+|+++|........ .... .... .. .......--.+++....... ... +. +
T Consensus 70 ~Gg~~a~~~a~~~~~---~~vl~~~~~~~~~~~-~~~~---~~~~-~~-~~~~~~~~~~~~~~d~~~~~---~~~-i~-~ 135 (190)
T PRK11071 70 LGGYYATWLSQCFML---PAVVVNPAVRPFELL-TDYL---GENE-NP-YTGQQYVLESRHIYDLKVMQ---IDP-LE-S 135 (190)
T ss_pred HHHHHHHHHHHHcCC---CEEEECCCCCHHHHH-HHhc---CCcc-cc-cCCCcEEEcHHHHHHHHhcC---Ccc-CC-C
Confidence 999999999999983 468888865521111 1110 0000 00 00000000011111111000 011 11 4
Q ss_pred heeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHH
Q 024228 201 LEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILA 260 (270)
Q Consensus 201 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 260 (270)
.+|+++++|++|+++|++.+.++++. ++.++++|++|.+ ...+++.+.+.+|++
T Consensus 136 ~~~v~iihg~~De~V~~~~a~~~~~~----~~~~~~~ggdH~f--~~~~~~~~~i~~fl~ 189 (190)
T PRK11071 136 PDLIWLLQQTGDEVLDYRQAVAYYAA----CRQTVEEGGNHAF--VGFERYFNQIVDFLG 189 (190)
T ss_pred hhhEEEEEeCCCCcCCHHHHHHHHHh----cceEEECCCCcch--hhHHHhHHHHHHHhc
Confidence 48899999999999999999999875 3567889999998 444778899999875
No 56
>PRK10566 esterase; Provisional
Probab=99.92 E-value=4.7e-23 Score=155.48 Aligned_cols=212 Identities=15% Similarity=0.136 Sum_probs=129.9
Q ss_pred EEEEecCC-CCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCCh-------HHHHHHHHH
Q 024228 34 LNIWVPKK-TTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTA-------SFQAECMAK 104 (270)
Q Consensus 34 l~~~~~~~-~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~-------~~~~~~~~~ 104 (270)
++|+..+. .++.|+||++||++++.. .|..++..|++. |.|+++|+||+|.+......... ....+|+.+
T Consensus 15 ~~~~p~~~~~~~~p~vv~~HG~~~~~~-~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (249)
T PRK10566 15 LHAFPAGQRDTPLPTVFFYHGFTSSKL-VYSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPT 93 (249)
T ss_pred EEEcCCCCCCCCCCEEEEeCCCCcccc-hHHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHH
Confidence 44444332 234689999999999988 899999999887 99999999999976432211111 112344444
Q ss_pred HHHH------hCCCceEEEEEchhHHHHHHHHhhCccccccEE-EecccCCCCchhhhHhhhhccchhhhhhcccccHHH
Q 024228 105 GLRK------LGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMV-VTCSVMGLTESVSNAALERIGYESWVDFLLPKTADA 177 (270)
Q Consensus 105 ~l~~------~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (270)
+++. ++.++++++|||+||.+++.++.++|+ +.+.+ ++++... .. ....... .... ..+.....
T Consensus 94 ~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~-~~~~~~~~~~~~~-~~-~~~~~~~----~~~~--~~~~~~~~ 164 (249)
T PRK10566 94 LRAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPW-VKCVASLMGSGYF-TS-LARTLFP----PLIP--ETAAQQAE 164 (249)
T ss_pred HHHHHHhcCCcCccceeEEeecccHHHHHHHHHhCCC-eeEEEEeeCcHHH-HH-HHHHhcc----cccc--cccccHHH
Confidence 4443 245689999999999999999998886 44444 3332211 00 0000000 0000 00001111
Q ss_pred HHHHHHhhhhcCCCChhhhhhhh-heeeeEEEcCCCccCCHHHHHHHHHHhcC-----CceEEEecCCCcceeecchHhH
Q 024228 178 LKVQFDIACYKLPTLPAFVYKHI-LEKIHLLWGENDKIFDMQVARNLKEQVGQ-----NATMESIEKAGHLVNLERPFVY 251 (270)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~-~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-----~~~~~~~~~~gH~~~~~~~~~~ 251 (270)
......... .......+.++ .+|+|+++|++|.++|++.++.+.+.+.. +.+++.++++||... + ..
T Consensus 165 ~~~~~~~~~---~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~H~~~---~-~~ 237 (249)
T PRK10566 165 FNNIVAPLA---EWEVTHQLEQLADRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCLWEPGVRHRIT---P-EA 237 (249)
T ss_pred HHHHHHHHh---hcChhhhhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEecCCCCCccC---H-HH
Confidence 111111100 11112223343 48999999999999999999999988762 257788999999863 3 35
Q ss_pred HHHHHHHHHhh
Q 024228 252 NRQLKTILASL 262 (270)
Q Consensus 252 ~~~i~~fl~~~ 262 (270)
.+.+.+||++.
T Consensus 238 ~~~~~~fl~~~ 248 (249)
T PRK10566 238 LDAGVAFFRQH 248 (249)
T ss_pred HHHHHHHHHhh
Confidence 68888998754
No 57
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.92 E-value=2.8e-23 Score=148.52 Aligned_cols=217 Identities=15% Similarity=0.145 Sum_probs=153.3
Q ss_pred CceeEEEeecCCeEEEE-EecCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc--ceEEeecCCCCCCCCCCCCCCChH
Q 024228 20 GMTQRTIEIEPGTILNI-WVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT--YEVYVPDFLFFGSSVTDRPDRTAS 96 (270)
Q Consensus 20 ~~~~~~i~~~~g~~l~~-~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~--~~v~~~d~~g~G~s~~~~~~~~~~ 96 (270)
.++-..+.++.|..+.. +...+....+++++.||...+.. ....+...|+.. ++++++|++|+|.|.+.+......
T Consensus 34 ~v~v~~~~t~rgn~~~~~y~~~~~~~~~~lly~hGNa~Dlg-q~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE~n~y 112 (258)
T KOG1552|consen 34 FVEVFKVKTSRGNEIVCMYVRPPEAAHPTLLYSHGNAADLG-QMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSERNLY 112 (258)
T ss_pred ccceEEeecCCCCEEEEEEEcCccccceEEEEcCCcccchH-HHHHHHHHHhhcccceEEEEecccccccCCCcccccch
Confidence 45566677776666533 33333234699999999977766 555566667764 999999999999999877665544
Q ss_pred HHHHHHHHHHHHhC--CCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhccccc
Q 024228 97 FQAECMAKGLRKLG--VEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKT 174 (270)
Q Consensus 97 ~~~~~~~~~l~~~~--~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (270)
+.++.+.++++.-. .++++|+|+|+|+..++.+|.+.| +.++|+.+|.................+..+
T Consensus 113 ~Di~avye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL~SPf~S~~rv~~~~~~~~~~~d~f-------- 182 (258)
T KOG1552|consen 113 ADIKAVYEWLRNRYGSPERIILYGQSIGTVPTVDLASRYP--LAAVVLHSPFTSGMRVAFPDTKTTYCFDAF-------- 182 (258)
T ss_pred hhHHHHHHHHHhhcCCCceEEEEEecCCchhhhhHhhcCC--cceEEEeccchhhhhhhccCcceEEeeccc--------
Confidence 44444444444433 578999999999999999999998 999999998765332221110000000000
Q ss_pred HHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHHH
Q 024228 175 ADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQ 254 (270)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~ 254 (270)
........+.+|+|++||++|+++|.....++++..+...+-.++.|+||.... ...++.+.
T Consensus 183 -----------------~~i~kI~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~~~epl~v~g~gH~~~~-~~~~yi~~ 244 (258)
T KOG1552|consen 183 -----------------PNIEKISKITCPVLIIHGTDDEVVDFSHGKALYERCKEKVEPLWVKGAGHNDIE-LYPEYIEH 244 (258)
T ss_pred -----------------cccCcceeccCCEEEEecccCceecccccHHHHHhccccCCCcEEecCCCcccc-cCHHHHHH
Confidence 001223444599999999999999999999999999856688999999999854 44457799
Q ss_pred HHHHHHhhhhh
Q 024228 255 LKTILASLVHA 265 (270)
Q Consensus 255 i~~fl~~~~~~ 265 (270)
+.+|+......
T Consensus 245 l~~f~~~~~~~ 255 (258)
T KOG1552|consen 245 LRRFISSVLPS 255 (258)
T ss_pred HHHHHHHhccc
Confidence 99999876654
No 58
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.91 E-value=1.1e-23 Score=157.18 Aligned_cols=183 Identities=25% Similarity=0.313 Sum_probs=126.0
Q ss_pred ceEEeecCCCCCCCCC----CCCCCChHHHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCC
Q 024228 73 YEVYVPDFLFFGSSVT----DRPDRTASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMG 148 (270)
Q Consensus 73 ~~v~~~d~~g~G~s~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~ 148 (270)
|+|+++|+||+|.|++ ....++.+++++++..+++.++.++++++||||||.+++.+|+++|++|+++|+++++..
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~~~~ 80 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPERVKKLVLISPPPD 80 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESSH
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCchhhcCcEEEeeecc
Confidence 6899999999999994 235588999999999999999999999999999999999999999999999999998620
Q ss_pred ----CCchhhhH-hhhhccc---------------hhhh---hhcc----cccHHHHH--HHHH--------h-----hh
Q 024228 149 ----LTESVSNA-ALERIGY---------------ESWV---DFLL----PKTADALK--VQFD--------I-----AC 186 (270)
Q Consensus 149 ----~~~~~~~~-~~~~~~~---------------~~~~---~~~~----~~~~~~~~--~~~~--------~-----~~ 186 (270)
........ ....... .... .... ........ .... . ..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (230)
T PF00561_consen 81 LPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFVEDFLKQFQSQQYARFAETDAFDNMFWNALG 160 (230)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred chhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhheeeccCccccchhhccchhhhhHHHHHHHHhhhcccccc
Confidence 00000000 0000000 0000 0000 00000000 0000 0 00
Q ss_pred hcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHHHHH
Q 024228 187 YKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLK 256 (270)
Q Consensus 187 ~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~ 256 (270)
....+.....+..+.+|+++++|++|.++|++....+.+.++ +.++++++++||..++++++++.+.|.
T Consensus 161 ~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~-~~~~~~~~~~GH~~~~~~~~~~~~~i~ 229 (230)
T PF00561_consen 161 YFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLIP-NSQLVLIEGSGHFAFLEGPDEFNEIII 229 (230)
T ss_dssp HHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHST-TEEEEEETTCCSTHHHHSHHHHHHHHH
T ss_pred ccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhcC-CCEEEECCCCChHHHhcCHHhhhhhhc
Confidence 000111122333445999999999999999999999998888 899999999999999999999988775
No 59
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.91 E-value=6.2e-22 Score=156.14 Aligned_cols=236 Identities=16% Similarity=0.190 Sum_probs=147.3
Q ss_pred ceeEEEeec-CCeEEEEEecCC-CCCCceEEEeCCCCCcccccH-----HHHHHHhhcc-ceEEeecCCCCCCCCCCCCC
Q 024228 21 MTQRTIEIE-PGTILNIWVPKK-TTKKHAVVLLHPFGFDGILTW-----QFQVLALAKT-YEVYVPDFLFFGSSVTDRPD 92 (270)
Q Consensus 21 ~~~~~i~~~-~g~~l~~~~~~~-~~~~~~vv~~hG~~~~~~~~~-----~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~ 92 (270)
.+...+..+ ++..+..+.+.. ...+++||++||+..+.. .+ +.+++.|.+. |+|+++|++|+|.+.. .
T Consensus 36 ~~~~~~v~~~~~~~l~~~~~~~~~~~~~pvl~v~~~~~~~~-~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~---~ 111 (350)
T TIGR01836 36 VTPKEVVYREDKVVLYRYTPVKDNTHKTPLLIVYALVNRPY-MLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADR---Y 111 (350)
T ss_pred CCCCceEEEcCcEEEEEecCCCCcCCCCcEEEeccccccce-eccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHh---c
Confidence 344444433 556666554432 234567999999865544 43 5788999887 9999999999998753 2
Q ss_pred CChHHHHH-HHHH----HHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchh--hhHhhhh-----
Q 024228 93 RTASFQAE-CMAK----GLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESV--SNAALER----- 160 (270)
Q Consensus 93 ~~~~~~~~-~~~~----~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~--~~~~~~~----- 160 (270)
.+.++++. ++.+ +++..+.++++++||||||.+++.+++.+|++|+++|+++++....... .......
T Consensus 112 ~~~~d~~~~~~~~~v~~l~~~~~~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~~~~~~~~~~~~~~~~~~~ 191 (350)
T TIGR01836 112 LTLDDYINGYIDKCVDYICRTSKLDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDFETPGNMLSNWARHVDIDL 191 (350)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCcccEEEECHHHHHHHHHHHhCchheeeEEEeccccccCCCCchhhhhccccCHHH
Confidence 35555543 2433 4445577899999999999999999999999999999999877543211 0000000
Q ss_pred ----cc-c-----hhhhhhccc---------------ccHHH---------------------HHHHHHhhhhcCCCC--
Q 024228 161 ----IG-Y-----ESWVDFLLP---------------KTADA---------------------LKVQFDIACYKLPTL-- 192 (270)
Q Consensus 161 ----~~-~-----~~~~~~~~~---------------~~~~~---------------------~~~~~~~~~~~~~~~-- 192 (270)
.+ . ......+.+ ..... +.+++..........
T Consensus 192 ~~~~~~~~p~~~~~~~f~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~d~~~~~~~~~~~~~~~~~~~n~l~~g 271 (350)
T TIGR01836 192 AVDTMGNIPGELLNLTFLMLKPFSLGYQKYVNLVDILEDERKVENFLRMEKWIFDSPDQAGEAFRQFVKDFYQQNGLING 271 (350)
T ss_pred HHHhcCCCCHHHHHHHHHhcCcchhhhHHHHHHHHhcCChHHHHHHHHHHHHhcCCcCccHHHHHHHHHHHHhcCcccCC
Confidence 00 0 000000000 00000 011111000000000
Q ss_pred ------hhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcC-CceEEEecCCCcceeecc---hHhHHHHHHHHHHh
Q 024228 193 ------PAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQ-NATMESIEKAGHLVNLER---PFVYNRQLKTILAS 261 (270)
Q Consensus 193 ------~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~---~~~~~~~i~~fl~~ 261 (270)
....+.++.+|+++++|++|.++|++.++.+.+.++. +.++++++ +||...+.. ++++.+.|.+||.+
T Consensus 272 ~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~v~~~i~~wl~~ 349 (350)
T TIGR01836 272 EVEIGGRKVDLKNIKMPILNIYAERDHLVPPDASKALNDLVSSEDYTELSFP-GGHIGIYVSGKAQKEVPPAIGKWLQA 349 (350)
T ss_pred eeEECCEEccHHhCCCCeEEEecCCCCcCCHHHHHHHHHHcCCCCeEEEEcC-CCCEEEEECchhHhhhhHHHHHHHHh
Confidence 0112445569999999999999999999999998862 46777777 689987754 47899999999975
No 60
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.90 E-value=1.8e-22 Score=144.88 Aligned_cols=123 Identities=19% Similarity=0.272 Sum_probs=96.9
Q ss_pred eEEEeecCCe-EEEEEecCC-CCCCceEEEeCCCCCcccccHHHHHHHhhcc--ceEEeecCCCCCCCCCCCC-CCChHH
Q 024228 23 QRTIEIEPGT-ILNIWVPKK-TTKKHAVVLLHPFGFDGILTWQFQVLALAKT--YEVYVPDFLFFGSSVTDRP-DRTASF 97 (270)
Q Consensus 23 ~~~i~~~~g~-~l~~~~~~~-~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~--~~v~~~d~~g~G~s~~~~~-~~~~~~ 97 (270)
...+.+.++. .+..|...+ .+.+|.++++||++.+.- .|..++..|... .+|+++|+||||++.-... +.+.+.
T Consensus 50 kedv~i~~~~~t~n~Y~t~~~~t~gpil~l~HG~G~S~L-SfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~dlS~eT 128 (343)
T KOG2564|consen 50 KEDVSIDGSDLTFNVYLTLPSATEGPILLLLHGGGSSAL-SFAIFASELKSKIRCRCLALDLRGHGETKVENEDDLSLET 128 (343)
T ss_pred ccccccCCCcceEEEEEecCCCCCccEEEEeecCcccch-hHHHHHHHHHhhcceeEEEeeccccCccccCChhhcCHHH
Confidence 3344453222 455444443 567899999999999999 999999998887 8889999999999986654 489999
Q ss_pred HHHHHHHHHHHh---CCCceEEEEEchhHHHHHHHHhhC--ccccccEEEecccC
Q 024228 98 QAECMAKGLRKL---GVEKCTLVGVSYGGMVGFKMAEMY--PDLVESMVVTCSVM 147 (270)
Q Consensus 98 ~~~~~~~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~--p~~v~~~i~~~~~~ 147 (270)
+++|+.++++.+ ...+++|+||||||.+|...|... |. +.++++++-.-
T Consensus 129 ~~KD~~~~i~~~fge~~~~iilVGHSmGGaIav~~a~~k~lps-l~Gl~viDVVE 182 (343)
T KOG2564|consen 129 MSKDFGAVIKELFGELPPQIILVGHSMGGAIAVHTAASKTLPS-LAGLVVIDVVE 182 (343)
T ss_pred HHHHHHHHHHHHhccCCCceEEEeccccchhhhhhhhhhhchh-hhceEEEEEec
Confidence 999999999987 245799999999999998877653 55 88999887543
No 61
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.90 E-value=4.5e-22 Score=137.63 Aligned_cols=142 Identities=25% Similarity=0.279 Sum_probs=111.7
Q ss_pred eEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHH-H-HhCCCceEEEEEchhH
Q 024228 47 AVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGL-R-KLGVEKCTLVGVSYGG 123 (270)
Q Consensus 47 ~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l-~-~~~~~~~~l~G~S~Gg 123 (270)
+||++||++++.. .|..+++.|++. |.|+.+|+|++|.+... ...+++.+.+ . ..+.++++++|||+||
T Consensus 1 ~vv~~HG~~~~~~-~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg 72 (145)
T PF12695_consen 1 VVVLLHGWGGSRR-DYQPLAEALAEQGYAVVAFDYPGHGDSDGA-------DAVERVLADIRAGYPDPDRIILIGHSMGG 72 (145)
T ss_dssp EEEEECTTTTTTH-HHHHHHHHHHHTTEEEEEESCTTSTTSHHS-------HHHHHHHHHHHHHHCTCCEEEEEEETHHH
T ss_pred CEEEECCCCCCHH-HHHHHHHHHHHCCCEEEEEecCCCCccchh-------HHHHHHHHHHHhhcCCCCcEEEEEEccCc
Confidence 5899999999988 899999999998 99999999999987321 1222222222 1 2366899999999999
Q ss_pred HHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhhee
Q 024228 124 MVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEK 203 (270)
Q Consensus 124 ~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 203 (270)
.+++.++.+. .+++++|++++... ...+.....|
T Consensus 73 ~~a~~~~~~~-~~v~~~v~~~~~~~---------------------------------------------~~~~~~~~~p 106 (145)
T PF12695_consen 73 AIAANLAARN-PRVKAVVLLSPYPD---------------------------------------------SEDLAKIRIP 106 (145)
T ss_dssp HHHHHHHHHS-TTESEEEEESESSG---------------------------------------------CHHHTTTTSE
T ss_pred HHHHHHhhhc-cceeEEEEecCccc---------------------------------------------hhhhhccCCc
Confidence 9999999998 67999999998210 0011122269
Q ss_pred eeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcc
Q 024228 204 IHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHL 242 (270)
Q Consensus 204 ~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 242 (270)
+++++|++|..++.+..+.+.+.++.+.+++++++++|+
T Consensus 107 v~~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 107 VLFIHGENDPLVPPEQVRRLYEALPGPKELYIIPGAGHF 145 (145)
T ss_dssp EEEEEETT-SSSHHHHHHHHHHHHCSSEEEEEETTS-TT
T ss_pred EEEEEECCCCcCCHHHHHHHHHHcCCCcEEEEeCCCcCc
Confidence 999999999999999999999999867999999999995
No 62
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.88 E-value=1e-20 Score=158.72 Aligned_cols=237 Identities=16% Similarity=0.164 Sum_probs=154.0
Q ss_pred cccCCceeEEEeecCCeEEEEEecCCCCC-----CceEEEeCCCCCccc-ccHHHHHHHhhcc-ceEEeecCCCCCCCCC
Q 024228 16 LKLVGMTQRTIEIEPGTILNIWVPKKTTK-----KHAVVLLHPFGFDGI-LTWQFQVLALAKT-YEVYVPDFLFFGSSVT 88 (270)
Q Consensus 16 ~~~~~~~~~~i~~~~g~~l~~~~~~~~~~-----~~~vv~~hG~~~~~~-~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~ 88 (270)
.+....+...+...||.+++.|...+... -|+||++||++.... ..|....+.|+.. |.|+.+|+||.+.-..
T Consensus 360 ~~~~~~e~~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~ 439 (620)
T COG1506 360 VKLAEPEPVTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGR 439 (620)
T ss_pred cccCCceEEEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHH
Confidence 34455677777887999998776554321 289999999986555 2455667778877 9999999998644211
Q ss_pred --------CCCCCChHHHHHHHHHHHHHh---CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHh
Q 024228 89 --------DRPDRTASFQAECMAKGLRKL---GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAA 157 (270)
Q Consensus 89 --------~~~~~~~~~~~~~~~~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~ 157 (270)
.......+++.+.+. ++... +.+++++.|+|+||++++.++...| ++++.+...+............
T Consensus 440 ~F~~~~~~~~g~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~~~~~~~~~~ 517 (620)
T COG1506 440 EFADAIRGDWGGVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVDWLLYFGEST 517 (620)
T ss_pred HHHHhhhhccCCccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcchhhhhccccc
Confidence 112244555554454 44443 3458999999999999999999988 6888877766544221111100
Q ss_pred hhhccchhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc---CCceEE
Q 024228 158 LERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG---QNATME 234 (270)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~ 234 (270)
....................+. ...+-....++.+|+|+|||++|..||.+.+.++.+.+. ..++++
T Consensus 518 ~~~~~~~~~~~~~~~~~~~~~~----------~~sp~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~ 587 (620)
T COG1506 518 EGLRFDPEENGGGPPEDREKYE----------DRSPIFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELV 587 (620)
T ss_pred hhhcCCHHHhCCCcccChHHHH----------hcChhhhhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEE
Confidence 0000000000000000001111 112333455566999999999999999999999988876 357999
Q ss_pred EecCCCcceee-cchHhHHHHHHHHHHhhhh
Q 024228 235 SIEKAGHLVNL-ERPFVYNRQLKTILASLVH 264 (270)
Q Consensus 235 ~~~~~gH~~~~-~~~~~~~~~i~~fl~~~~~ 264 (270)
++|+.+|.+.. ++...+.+.+.+|++++..
T Consensus 588 ~~p~e~H~~~~~~~~~~~~~~~~~~~~~~~~ 618 (620)
T COG1506 588 VFPDEGHGFSRPENRVKVLKEILDWFKRHLK 618 (620)
T ss_pred EeCCCCcCCCCchhHHHHHHHHHHHHHHHhc
Confidence 99999999977 5566688888888887654
No 63
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.87 E-value=3.8e-20 Score=150.06 Aligned_cols=203 Identities=14% Similarity=0.103 Sum_probs=131.0
Q ss_pred CCceEEEeCCCCCcccccHH-----HHHHHhhcc-ceEEeecCCCCCCCCCCC--CCCChHHHHHHHHHHHHHhCCCceE
Q 024228 44 KKHAVVLLHPFGFDGILTWQ-----FQVLALAKT-YEVYVPDFLFFGSSVTDR--PDRTASFQAECMAKGLRKLGVEKCT 115 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~~~~~-----~~~~~l~~~-~~v~~~d~~g~G~s~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~ 115 (270)
.+++||++||+..... .|+ .+++.|.++ |+|+++|++|+|.+.... .++..+.+.+++..+++.++.++++
T Consensus 187 ~~~PlLiVp~~i~k~y-ilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~~ddY~~~~i~~al~~v~~~~g~~kv~ 265 (532)
T TIGR01838 187 HKTPLLIVPPWINKYY-ILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKTFDDYIRDGVIAALEVVEAITGEKQVN 265 (532)
T ss_pred CCCcEEEECcccccce-eeecccchHHHHHHHHCCcEEEEEECCCCCcccccCChhhhHHHHHHHHHHHHHHhcCCCCeE
Confidence 5789999999987776 664 688999877 999999999999886432 2233344556677777777889999
Q ss_pred EEEEchhHHHHH----HHHhhC-ccccccEEEecccCCCCchhhh-------------Hhhhhccc------hhhhhhcc
Q 024228 116 LVGVSYGGMVGF----KMAEMY-PDLVESMVVTCSVMGLTESVSN-------------AALERIGY------ESWVDFLL 171 (270)
Q Consensus 116 l~G~S~Gg~~a~----~~a~~~-p~~v~~~i~~~~~~~~~~~~~~-------------~~~~~~~~------~~~~~~~~ 171 (270)
++|||+||.++. .+++.. +++|++++++++..++...... ......+. ......+.
T Consensus 266 lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G~l~~f~~~~~~~~~e~~~~~~G~lpg~~m~~~F~~lr 345 (532)
T TIGR01838 266 CVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPGELGVFVDEEIVAGIERQNGGGGYLDGRQMAVTFSLLR 345 (532)
T ss_pred EEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcchhhhhcCchhHHHHHHHHHhcCCCCHHHHHHHHHhcC
Confidence 999999999852 245555 7789999999988765432110 00000000 00000000
Q ss_pred c---------------ccH----------------HH-HHHHHHhhhhcCC--------CChhhhhhhhheeeeEEEcCC
Q 024228 172 P---------------KTA----------------DA-LKVQFDIACYKLP--------TLPAFVYKHILEKIHLLWGEN 211 (270)
Q Consensus 172 ~---------------~~~----------------~~-~~~~~~~~~~~~~--------~~~~~~~~~~~~P~l~i~g~~ 211 (270)
+ ... .. ..+++........ ......+.++.+|++++.|++
T Consensus 346 p~~l~w~~~v~~yl~g~~~~~fdll~Wn~D~t~lP~~~~~~~lr~ly~~N~L~~G~~~v~g~~~dL~~I~vPvLvV~G~~ 425 (532)
T TIGR01838 346 ENDLIWNYYVDNYLKGKSPVPFDLLFWNSDSTNLPGKMHNFYLRNLYLQNALTTGGLEVCGVRLDLSKVKVPVYIIATRE 425 (532)
T ss_pred hhhHHHHHHHHHHhcCCCccchhHHHHhccCccchHHHHHHHHHHHHhcCCCcCCeeEECCEecchhhCCCCEEEEeeCC
Confidence 0 000 00 0000000000000 001122333339999999999
Q ss_pred CccCCHHHHHHHHHHhcCCceEEEecCCCcceeecch
Q 024228 212 DKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERP 248 (270)
Q Consensus 212 D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~ 248 (270)
|.++|++.+..+.+.++ +.+..+++++||..++++|
T Consensus 426 D~IvP~~sa~~l~~~i~-~~~~~vL~~sGHi~~ienP 461 (532)
T TIGR01838 426 DHIAPWQSAYRGAALLG-GPKTFVLGESGHIAGVVNP 461 (532)
T ss_pred CCcCCHHHHHHHHHHCC-CCEEEEECCCCCchHhhCC
Confidence 99999999999999887 7888899999999988765
No 64
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.86 E-value=7.3e-20 Score=139.20 Aligned_cols=225 Identities=26% Similarity=0.289 Sum_probs=144.9
Q ss_pred CeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc---ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHH
Q 024228 31 GTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT---YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLR 107 (270)
Q Consensus 31 g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~---~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~ 107 (270)
+..+.|...+.. .|+++++||++++.. .|......+... |+++.+|+||||.|. .. .......++++..+++
T Consensus 9 ~~~~~~~~~~~~--~~~i~~~hg~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~-~~-~~~~~~~~~~~~~~~~ 83 (282)
T COG0596 9 GVRLAYREAGGG--GPPLVLLHGFPGSSS-VWRPVFKVLPALAARYRVIAPDLRGHGRSD-PA-GYSLSAYADDLAALLD 83 (282)
T ss_pred CeEEEEeecCCC--CCeEEEeCCCCCchh-hhHHHHHHhhccccceEEEEecccCCCCCC-cc-cccHHHHHHHHHHHHH
Confidence 445555555442 569999999999988 887743333332 899999999999997 22 3345555899999999
Q ss_pred HhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCC-----------CchhhhHh---hhhc---cchhh----
Q 024228 108 KLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGL-----------TESVSNAA---LERI---GYESW---- 166 (270)
Q Consensus 108 ~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~-----------~~~~~~~~---~~~~---~~~~~---- 166 (270)
.++..+++++|||+||.+++.++.++|+++++++++++.... ........ .... .....
T Consensus 84 ~~~~~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (282)
T COG0596 84 ALGLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALADLLLGLDAAAFAALLAAL 163 (282)
T ss_pred HhCCCceEEEEecccHHHHHHHHHhcchhhheeeEecCCCCcccccCccccCccccchhhhhhhhhccchhhhhhhhhcc
Confidence 999888999999999999999999999999999999976430 00000000 0000 00000
Q ss_pred --hhhcc-----------c-ccHHHHHHHHHhhh---hc----CCC--ChhhhhhhhheeeeEEEcCCCccCCHHHHHHH
Q 024228 167 --VDFLL-----------P-KTADALKVQFDIAC---YK----LPT--LPAFVYKHILEKIHLLWGENDKIFDMQVARNL 223 (270)
Q Consensus 167 --~~~~~-----------~-~~~~~~~~~~~~~~---~~----~~~--~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~ 223 (270)
..... . .............. .. ... ..........+|+++++|++|.+.|......+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~d~~~~~~~~~~~ 243 (282)
T COG0596 164 GLLAALAAAARAGLAEALRAPLLGAAAAAFARAARADLAAALLALLDRDLRAALARITVPTLIIHGEDDPVVPAELARRL 243 (282)
T ss_pred cccccccccchhccccccccccchhHhhhhhhhcccccchhhhcccccccchhhccCCCCeEEEecCCCCcCCHHHHHHH
Confidence 00000 0 00000000000000 00 000 01122333349999999999977776666666
Q ss_pred HHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHH
Q 024228 224 KEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILA 260 (270)
Q Consensus 224 ~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 260 (270)
.+..+...++.+++++||..+.++|+.+.+.+.+|++
T Consensus 244 ~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~~~~ 280 (282)
T COG0596 244 AAALPNDARLVVIPGAGHFPHLEAPEAFAAALLAFLE 280 (282)
T ss_pred HhhCCCCceEEEeCCCCCcchhhcHHHHHHHHHHHHh
Confidence 6666523899999999999999999999888888543
No 65
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.86 E-value=5e-20 Score=131.14 Aligned_cols=213 Identities=15% Similarity=0.121 Sum_probs=148.5
Q ss_pred CCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHH-HhCCCceEEEEEch
Q 024228 43 TKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLR-KLGVEKCTLVGVSY 121 (270)
Q Consensus 43 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~l~G~S~ 121 (270)
..+..++++|=.|+++. .|+.+...|...+.++++++||+|..-..+...+++.+++.+...+. .....++.++||||
T Consensus 5 ~~~~~L~cfP~AGGsa~-~fr~W~~~lp~~iel~avqlPGR~~r~~ep~~~di~~Lad~la~el~~~~~d~P~alfGHSm 83 (244)
T COG3208 5 GARLRLFCFPHAGGSAS-LFRSWSRRLPADIELLAVQLPGRGDRFGEPLLTDIESLADELANELLPPLLDAPFALFGHSM 83 (244)
T ss_pred CCCceEEEecCCCCCHH-HHHHHHhhCCchhheeeecCCCcccccCCcccccHHHHHHHHHHHhccccCCCCeeecccch
Confidence 34678999999899988 99999999988899999999999998777777899999999998888 45557899999999
Q ss_pred hHHHHHHHHhhCcc---ccccEEEecccCCCCchh-------hhHhhhhcc-chhhh-hhcc-cccHHHHHHHHH-----
Q 024228 122 GGMVGFKMAEMYPD---LVESMVVTCSVMGLTESV-------SNAALERIG-YESWV-DFLL-PKTADALKVQFD----- 183 (270)
Q Consensus 122 Gg~~a~~~a~~~p~---~v~~~i~~~~~~~~~~~~-------~~~~~~~~~-~~~~~-~~~~-~~~~~~~~~~~~----- 183 (270)
||++|..+|.+... .+.++.+.+...+..... .......+. ..... ..+. ++....+...+.
T Consensus 84 Ga~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~i~~~~D~~~l~~l~~lgG~p~e~led~El~~l~LPilRAD~~~ 163 (244)
T COG3208 84 GAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQIHHLDDADFLADLVDLGGTPPELLEDPELMALFLPILRADFRA 163 (244)
T ss_pred hHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCCccCCCHHHHHHHHHHhCCCChHHhcCHHHHHHHHHHHHHHHHH
Confidence 99999999987522 256666665544311100 000110000 00000 0000 011111111111
Q ss_pred hhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHHhh
Q 024228 184 IACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILASL 262 (270)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 262 (270)
...|+... -..+.||+.++.|++|..+..+....|.+...+..++++++| ||+...++.+++.+.|.+.+...
T Consensus 164 ~e~Y~~~~-----~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~~~f~l~~fdG-gHFfl~~~~~~v~~~i~~~l~~~ 236 (244)
T COG3208 164 LESYRYPP-----PAPLACPIHAFGGEKDHEVSRDELGAWREHTKGDFTLRVFDG-GHFFLNQQREEVLARLEQHLAHH 236 (244)
T ss_pred hcccccCC-----CCCcCcceEEeccCcchhccHHHHHHHHHhhcCCceEEEecC-cceehhhhHHHHHHHHHHHhhhh
Confidence 11111111 123339999999999999999999999999887899999996 99999999999999999988643
No 66
>PRK11460 putative hydrolase; Provisional
Probab=99.86 E-value=5.1e-20 Score=136.43 Aligned_cols=172 Identities=17% Similarity=0.219 Sum_probs=114.4
Q ss_pred CCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCC-----------CCCCC---hHHHHHHHHHHHH
Q 024228 43 TKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTD-----------RPDRT---ASFQAECMAKGLR 107 (270)
Q Consensus 43 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~-----------~~~~~---~~~~~~~~~~~l~ 107 (270)
+..++||++||++++.. .|..+++.|.+. +.+..++++|...+... ..... .....+.+.++++
T Consensus 14 ~~~~~vIlLHG~G~~~~-~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i~ 92 (232)
T PRK11460 14 PAQQLLLLFHGVGDNPV-AMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETVR 92 (232)
T ss_pred CCCcEEEEEeCCCCChH-HHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHHH
Confidence 45789999999999999 999999999876 44555555554322110 00011 1122222333333
Q ss_pred ----HhC--CCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccHHHHHHH
Q 024228 108 ----KLG--VEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQ 181 (270)
Q Consensus 108 ----~~~--~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (270)
..+ .++++++|||+||.+++.++.++|+.+.+++.+++..... +..
T Consensus 93 ~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~~~---------------------~~~------- 144 (232)
T PRK11460 93 YWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYASL---------------------PET------- 144 (232)
T ss_pred HHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEeccccccc---------------------ccc-------
Confidence 233 3579999999999999999999998778777765432100 000
Q ss_pred HHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc---CCceEEEecCCCcceeecchHhHHHHHHHH
Q 024228 182 FDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG---QNATMESIEKAGHLVNLERPFVYNRQLKTI 258 (270)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~~~~~~~~~~~~i~~f 258 (270)
....+|++++||++|+++|.+.++.+.+.+. .++++++++++||.+..+..+.+.+.+.++
T Consensus 145 ----------------~~~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~i~~~~~~~~~~~l~~~ 208 (232)
T PRK11460 145 ----------------APTATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGHAIDPRLMQFALDRLRYT 208 (232)
T ss_pred ----------------ccCCCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCHHHHHHHHHHHHHH
Confidence 0012799999999999999999988888775 256888999999998654444444445444
Q ss_pred H
Q 024228 259 L 259 (270)
Q Consensus 259 l 259 (270)
|
T Consensus 209 l 209 (232)
T PRK11460 209 V 209 (232)
T ss_pred c
Confidence 4
No 67
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.85 E-value=1.7e-19 Score=133.71 Aligned_cols=243 Identities=20% Similarity=0.181 Sum_probs=147.5
Q ss_pred ceeEEEeecCCeEE-EEEec-CCCCCCceEEEeCCCCCccc-ccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChH
Q 024228 21 MTQRTIEIEPGTIL-NIWVP-KKTTKKHAVVLLHPFGFDGI-LTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTAS 96 (270)
Q Consensus 21 ~~~~~i~~~~g~~l-~~~~~-~~~~~~~~vv~~hG~~~~~~-~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~ 96 (270)
...+.+.++||..+ ..|.. .....+|.||++||+.|+.. .+-+.+++.+.++ |.+++++.|||+.+....+...-.
T Consensus 49 ~~re~v~~pdg~~~~ldw~~~p~~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~~yh~ 128 (345)
T COG0429 49 YTRERLETPDGGFIDLDWSEDPRAAKKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSPRLYHS 128 (345)
T ss_pred cceEEEEcCCCCEEEEeeccCccccCCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCcceecc
Confidence 35567788877655 34444 33355689999999988877 3445667888888 999999999999987655443333
Q ss_pred HHHHHHHHHHHHh----CCCceEEEEEchhHHHHHHHHhhCcc--ccccEEEecccCCCCc-------hhhhHhhhhccc
Q 024228 97 FQAECMAKGLRKL----GVEKCTLVGVSYGGMVGFKMAEMYPD--LVESMVVTCSVMGLTE-------SVSNAALERIGY 163 (270)
Q Consensus 97 ~~~~~~~~~l~~~----~~~~~~l~G~S~Gg~~a~~~a~~~p~--~v~~~i~~~~~~~~~~-------~~~~~~~~~~~~ 163 (270)
.+.+|+..+++.+ ...++..+|.|+||.+...+..+..+ .+.+.+.++.+.+... .......+....
T Consensus 129 G~t~D~~~~l~~l~~~~~~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~~~~~~l~~~~s~~ly~r~l~ 208 (345)
T COG0429 129 GETEDIRFFLDWLKARFPPRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLEACAYRLDSGFSLRLYSRYLL 208 (345)
T ss_pred cchhHHHHHHHHHHHhCCCCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHHHHHHHHhcCchhhhhhHHHHH
Confidence 4446666666655 45689999999999655555555432 3566666655443210 000011110000
Q ss_pred hhh-------hhhc---cccc-HHHHHHHHHhhhhc-----------------CCCChhhhhhhhheeeeEEEcCCCccC
Q 024228 164 ESW-------VDFL---LPKT-ADALKVQFDIACYK-----------------LPTLPAFVYKHILEKIHLLWGENDKIF 215 (270)
Q Consensus 164 ~~~-------~~~~---~~~~-~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~P~l~i~g~~D~~~ 215 (270)
... ...+ .+.. ...++.......+. +.......+.++.+|+|+|++.+|+++
T Consensus 209 ~~L~~~~~~kl~~l~~~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~aSs~~~L~~Ir~PtLii~A~DDP~~ 288 (345)
T COG0429 209 RNLKRNAARKLKELEPSLPGTVLAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQASSLPLLPKIRKPTLIINAKDDPFM 288 (345)
T ss_pred HHHHHHHHHHHHhcCcccCcHHHHHHHhhchHHhccceeeecccCCCcHHHHHHhccccccccccccceEEEecCCCCCC
Confidence 000 0000 1111 11111111111110 011122334455599999999999999
Q ss_pred CHHHHHHHHHHhcCCceEEEecCCCcceeec----chH-hHHHHHHHHHHhhh
Q 024228 216 DMQVARNLKEQVGQNATMESIEKAGHLVNLE----RPF-VYNRQLKTILASLV 263 (270)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~----~~~-~~~~~i~~fl~~~~ 263 (270)
+++.........++++.+..-+.+||..++. ++. ...+.+.+||+...
T Consensus 289 ~~~~iP~~~~~~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~~ 341 (345)
T COG0429 289 PPEVIPKLQEMLNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDPFL 341 (345)
T ss_pred ChhhCCcchhcCCCceEEEeecCCceEEeccCccccchhhHHHHHHHHHHHHH
Confidence 9987777766455589999999999999886 343 56678888987654
No 68
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.85 E-value=4.6e-20 Score=135.70 Aligned_cols=192 Identities=16% Similarity=0.231 Sum_probs=122.3
Q ss_pred cHHHHHHHhhcc-ceEEeecCCCCCCCCCCC----CCCChHHHHHHHHHHHHHh------CCCceEEEEEchhHHHHHHH
Q 024228 61 TWQFQVLALAKT-YEVYVPDFLFFGSSVTDR----PDRTASFQAECMAKGLRKL------GVEKCTLVGVSYGGMVGFKM 129 (270)
Q Consensus 61 ~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~----~~~~~~~~~~~~~~~l~~~------~~~~~~l~G~S~Gg~~a~~~ 129 (270)
.|......|++. |.|+.+|+||.+...... ....-....+|+.+.++.+ +.+++.++|+|+||++++.+
T Consensus 2 ~f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~ 81 (213)
T PF00326_consen 2 SFNWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLA 81 (213)
T ss_dssp --SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHH
T ss_pred eeeHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchh
Confidence 344567788777 999999999987432111 1112233466666666655 34689999999999999999
Q ss_pred HhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhccc-ccHHHHHHHHHhhhhcCCCChhhhhhh--hheeeeE
Q 024228 130 AEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLP-KTADALKVQFDIACYKLPTLPAFVYKH--ILEKIHL 206 (270)
Q Consensus 130 a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~P~l~ 206 (270)
+.++|+++++++..++............. ...........+ .....+........ ..+ ..+|+|+
T Consensus 82 ~~~~~~~f~a~v~~~g~~d~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~s~~~~----------~~~~~~~~P~li 149 (213)
T PF00326_consen 82 ATQHPDRFKAAVAGAGVSDLFSYYGTTDI--YTKAEYLEYGDPWDNPEFYRELSPISP----------ADNVQIKPPVLI 149 (213)
T ss_dssp HHHTCCGSSEEEEESE-SSTTCSBHHTCC--HHHGHHHHHSSTTTSHHHHHHHHHGGG----------GGGCGGGSEEEE
T ss_pred hcccceeeeeeeccceecchhcccccccc--cccccccccCccchhhhhhhhhccccc----------cccccCCCCEEE
Confidence 99999999999999988765433222100 000001111111 11222222221111 222 4499999
Q ss_pred EEcCCCccCCHHHHHHHHHHhc---CCceEEEecCCCcceee-cchHhHHHHHHHHHHhhhh
Q 024228 207 LWGENDKIFDMQVARNLKEQVG---QNATMESIEKAGHLVNL-ERPFVYNRQLKTILASLVH 264 (270)
Q Consensus 207 i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl~~~~~ 264 (270)
++|++|..||++.+..+.+.+. .+.+++++|++||.+.. +......+.+.+||++...
T Consensus 150 ~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~~~~~~~~~~~f~~~~l~ 211 (213)
T PF00326_consen 150 IHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPENRRDWYERILDFFDKYLK 211 (213)
T ss_dssp EEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHHHHHHHHHHHHHHHHHHTT
T ss_pred EccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCchhHHHHHHHHHHHHHHHcC
Confidence 9999999999999999988876 35899999999996654 4556788999999987654
No 69
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.85 E-value=5.9e-19 Score=129.83 Aligned_cols=235 Identities=16% Similarity=0.168 Sum_probs=142.7
Q ss_pred eEEEeecCCeEEEEEecCCC-CCCceEEEeCCCCCcccccHHHH-----HHHhhccceEEeecCCCCCCCCCCCC----C
Q 024228 23 QRTIEIEPGTILNIWVPKKT-TKKHAVVLLHPFGFDGILTWQFQ-----VLALAKTYEVYVPDFLFFGSSVTDRP----D 92 (270)
Q Consensus 23 ~~~i~~~~g~~l~~~~~~~~-~~~~~vv~~hG~~~~~~~~~~~~-----~~~l~~~~~v~~~d~~g~G~s~~~~~----~ 92 (270)
++.++++-| .+++...|.. .++|++|-.|..|.+....|..+ ++.+.+++.++-+|.||+.......+ .
T Consensus 1 eh~v~t~~G-~v~V~v~G~~~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~~f~i~Hi~aPGqe~ga~~~p~~y~y 79 (283)
T PF03096_consen 1 EHDVETPYG-SVHVTVQGDPKGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQNFCIYHIDAPGQEEGAATLPEGYQY 79 (283)
T ss_dssp -EEEEETTE-EEEEEEESS--TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHTTSEEEEEE-TTTSTT-----TT---
T ss_pred CceeccCce-EEEEEEEecCCCCCceEEEeccccccchHHHHHHhcchhHHHHhhceEEEEEeCCCCCCCcccccccccc
Confidence 356777544 7777777764 36899999999999888447766 46677889999999999976543332 3
Q ss_pred CChHHHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhc-------cchh
Q 024228 93 RTASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERI-------GYES 165 (270)
Q Consensus 93 ~~~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~-------~~~~ 165 (270)
.+.+++++++..++++++.+.++-+|...||++..++|..+|++|.++|++++......+......+.. +...
T Consensus 80 Psmd~LAe~l~~Vl~~f~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~gw~Ew~~~K~~~~~L~~~gmt~ 159 (283)
T PF03096_consen 80 PSMDQLAEMLPEVLDHFGLKSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAGWMEWFYQKLSSWLLYSYGMTS 159 (283)
T ss_dssp --HHHHHCTHHHHHHHHT---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S---HHHHHHHHHH-------CTTS
T ss_pred cCHHHHHHHHHHHHHhCCccEEEEEeeccchhhhhhccccCccceeEEEEEecCCCCccHHHHHHHHHhccccccccccc
Confidence 789999999999999999999999999999999999999999999999999998765543322111111 1100
Q ss_pred h-hhhc---------c---c-------------ccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHH
Q 024228 166 W-VDFL---------L---P-------------KTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQV 219 (270)
Q Consensus 166 ~-~~~~---------~---~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~ 219 (270)
. ...+ . . .....+..++.....+... ........||+|++.|+..+.+ +.
T Consensus 160 ~~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R~DL--~~~~~~~~c~vLlvvG~~Sp~~--~~ 235 (283)
T PF03096_consen 160 SVKDYLLWHYFGKEEEENNSDLVQTYRQHLDERINPKNLALFLNSYNSRTDL--SIERPSLGCPVLLVVGDNSPHV--DD 235 (283)
T ss_dssp -HHHHHHHHHS-HHHHHCT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-------SECTTCCS-EEEEEETTSTTH--HH
T ss_pred chHHhhhhcccccccccccHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccc--hhhcCCCCCCeEEEEecCCcch--hh
Confidence 0 0000 0 0 0011111111111111110 0111222299999999999875 46
Q ss_pred HHHHHHHhc-CCceEEEecCCCcceeecchHhHHHHHHHHHHhh
Q 024228 220 ARNLKEQVG-QNATMESIEKAGHLVNLERPFVYNRQLKTILASL 262 (270)
Q Consensus 220 ~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 262 (270)
+..+.+++. ...++..++++|-.+..|+|+.+++.+.=||+..
T Consensus 236 vv~~ns~Ldp~~ttllkv~dcGglV~eEqP~klaea~~lFlQG~ 279 (283)
T PF03096_consen 236 VVEMNSKLDPTKTTLLKVADCGGLVLEEQPGKLAEAFKLFLQGM 279 (283)
T ss_dssp HHHHHHHS-CCCEEEEEETT-TT-HHHH-HHHHHHHHHHHHHHT
T ss_pred HHHHHhhcCcccceEEEecccCCcccccCcHHHHHHHHHHHccC
Confidence 667777775 5678999999999999999999999999999864
No 70
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.85 E-value=5.4e-20 Score=137.37 Aligned_cols=125 Identities=20% Similarity=0.206 Sum_probs=96.3
Q ss_pred EEeecCCeEEEEEe-cCCCCCCceEEEeCCCCCccc---ccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHH
Q 024228 25 TIEIEPGTILNIWV-PKKTTKKHAVVLLHPFGFDGI---LTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQA 99 (270)
Q Consensus 25 ~i~~~~g~~l~~~~-~~~~~~~~~vv~~hG~~~~~~---~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~ 99 (270)
+++.+.|....++. +....++++||++||++.... ..|..+++.|++. |.|+++|+||||.|.......+.+.+.
T Consensus 4 ~l~~~~g~~~~~~~~p~~~~~~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~~~~~~~~ 83 (266)
T TIGR03101 4 FLDAPHGFRFCLYHPPVAVGPRGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFAAARWDVWK 83 (266)
T ss_pred EecCCCCcEEEEEecCCCCCCceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCccccCCHHHHH
Confidence 45555566554433 333234678999999986432 2566778889877 999999999999998665556777888
Q ss_pred HHHHHHHHH---hCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCC
Q 024228 100 ECMAKGLRK---LGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGL 149 (270)
Q Consensus 100 ~~~~~~l~~---~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~ 149 (270)
+|+..+++. .+.++++++||||||.+++.+|.++|++++++|+++|....
T Consensus 84 ~Dv~~ai~~L~~~~~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~g 136 (266)
T TIGR03101 84 EDVAAAYRWLIEQGHPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVVSG 136 (266)
T ss_pred HHHHHHHHHHHhcCCCCEEEEEECHHHHHHHHHHHhCccccceEEEeccccch
Confidence 887775544 45679999999999999999999999999999999987653
No 71
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.85 E-value=2.3e-19 Score=158.53 Aligned_cols=230 Identities=18% Similarity=0.229 Sum_probs=147.1
Q ss_pred CCeEEEEEecCC-----CCCCceEEEeCCCCCcccccHHHH-----HHHhhcc-ceEEeecCCCCCCCCCCCC--CCChH
Q 024228 30 PGTILNIWVPKK-----TTKKHAVVLLHPFGFDGILTWQFQ-----VLALAKT-YEVYVPDFLFFGSSVTDRP--DRTAS 96 (270)
Q Consensus 30 ~g~~l~~~~~~~-----~~~~~~vv~~hG~~~~~~~~~~~~-----~~~l~~~-~~v~~~d~~g~G~s~~~~~--~~~~~ 96 (270)
+-.++..|.+.. ...+++||++||++.+.. .|+.. ++.|.+. |+|+++|+ |.++.+.. ..++.
T Consensus 47 ~~~~l~~y~~~~~~~~~~~~~~plllvhg~~~~~~-~~d~~~~~s~v~~L~~~g~~v~~~d~---G~~~~~~~~~~~~l~ 122 (994)
T PRK07868 47 PMYRLRRYFPPDNRPGQPPVGPPVLMVHPMMMSAD-MWDVTRDDGAVGILHRAGLDPWVIDF---GSPDKVEGGMERNLA 122 (994)
T ss_pred CcEEEEEeCCCCccccccCCCCcEEEECCCCCCcc-ceecCCcccHHHHHHHCCCEEEEEcC---CCCChhHcCccCCHH
Confidence 445665554432 235689999999999998 99864 7888777 99999995 55554332 24666
Q ss_pred HHHHHHHHHHHH---hCCCceEEEEEchhHHHHHHHHhhC-ccccccEEEecccCCCCch----hhhH------------
Q 024228 97 FQAECMAKGLRK---LGVEKCTLVGVSYGGMVGFKMAEMY-PDLVESMVVTCSVMGLTES----VSNA------------ 156 (270)
Q Consensus 97 ~~~~~~~~~l~~---~~~~~~~l~G~S~Gg~~a~~~a~~~-p~~v~~~i~~~~~~~~~~~----~~~~------------ 156 (270)
+++..+.+.++. +..++++++||||||.+++.+++.+ +++|+++++++++.++... ....
T Consensus 123 ~~i~~l~~~l~~v~~~~~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 202 (994)
T PRK07868 123 DHVVALSEAIDTVKDVTGRDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALPMGIPAGLAAAAADFMADH 202 (994)
T ss_pred HHHHHHHHHHHHHHHhhCCceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCcccchhhhhhcccccchhh
Confidence 666566555554 3446899999999999999998755 5589999998877543211 0000
Q ss_pred hhhhccchh------------------h---hhhcc-cccH------HH--------------HHHHHHhhhhcCCC---
Q 024228 157 ALERIGYES------------------W---VDFLL-PKTA------DA--------------LKVQFDIACYKLPT--- 191 (270)
Q Consensus 157 ~~~~~~~~~------------------~---~~~~~-~~~~------~~--------------~~~~~~~~~~~~~~--- 191 (270)
......... . ...+. +... .. ..++..........
T Consensus 203 ~~~~~~~p~~~~~~~~~~l~p~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~~w~~~~g~~~~~~~~~~~~~n~~~~g 282 (994)
T PRK07868 203 VFNRLDIPGWMARTGFQMLDPVKTAKARVDFLRQLHDREALLPREQQRRFLESEGWIAWSGPAISELLKQFIAHNRMMTG 282 (994)
T ss_pred hhhcCCCCHHHHHHHHHhcChhHHHHHHHHHHHhcCchhhhccchhhHhHHHHhhccccchHHHHHHHHHHHHhCcccCc
Confidence 000000000 0 00000 0000 00 01111111000000
Q ss_pred ---C--hhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceE-EEecCCCcceee---cchHhHHHHHHHHHHhh
Q 024228 192 ---L--PAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATM-ESIEKAGHLVNL---ERPFVYNRQLKTILASL 262 (270)
Q Consensus 192 ---~--~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~-~~~~~~gH~~~~---~~~~~~~~~i~~fl~~~ 262 (270)
. ....+.++.+|+|+|+|++|.++|++.++.+.+.++ +.++ .+++++||+.++ ..+++++..|.+||++.
T Consensus 283 ~~~~~~~~~~L~~i~~P~L~i~G~~D~ivp~~~~~~l~~~i~-~a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~~ 361 (994)
T PRK07868 283 GFAINGQMVTLADITCPVLAFVGEVDDIGQPASVRGIRRAAP-NAEVYESLIRAGHFGLVVGSRAAQQTWPTVADWVKWL 361 (994)
T ss_pred eEEECCEEcchhhCCCCEEEEEeCCCCCCCHHHHHHHHHhCC-CCeEEEEeCCCCCEeeeechhhhhhhChHHHHHHHHh
Confidence 0 001355666999999999999999999999999987 7887 677899999987 45788999999999987
Q ss_pred hh
Q 024228 263 VH 264 (270)
Q Consensus 263 ~~ 264 (270)
..
T Consensus 362 ~~ 363 (994)
T PRK07868 362 EG 363 (994)
T ss_pred cc
Confidence 54
No 72
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.85 E-value=5.2e-19 Score=134.78 Aligned_cols=197 Identities=14% Similarity=0.156 Sum_probs=120.3
Q ss_pred CCeEEE--EEecCC--CCCCceEEEeCCCCCcccccHHHH--HHHhhc-c-ceEEeecC--CCCCCCCCCC---------
Q 024228 30 PGTILN--IWVPKK--TTKKHAVVLLHPFGFDGILTWQFQ--VLALAK-T-YEVYVPDF--LFFGSSVTDR--------- 90 (270)
Q Consensus 30 ~g~~l~--~~~~~~--~~~~~~vv~~hG~~~~~~~~~~~~--~~~l~~-~-~~v~~~d~--~g~G~s~~~~--------- 90 (270)
.+..+. ++.+.. ..+.|+|+++||++++.. .|... ...+++ . +.|+++|. +|+|.+....
T Consensus 23 ~~~~~~~~v~~P~~~~~~~~P~vvllHG~~~~~~-~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~ 101 (275)
T TIGR02821 23 CGVPMTFGVFLPPQAAAGPVPVLWYLSGLTCTHE-NFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAG 101 (275)
T ss_pred cCCceEEEEEcCCCccCCCCCEEEEccCCCCCcc-HHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCcc
Confidence 345544 444432 235789999999999888 77532 344543 4 99999998 5555332100
Q ss_pred -----------CCCC-hHHHHHHHHHHHHH---hCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhh
Q 024228 91 -----------PDRT-ASFQAECMAKGLRK---LGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSN 155 (270)
Q Consensus 91 -----------~~~~-~~~~~~~~~~~l~~---~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~ 155 (270)
..+. .....+++..+++. ++.++++++||||||.+|+.++.++|+.+++++++++..........
T Consensus 102 ~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~~~~~~~ 181 (275)
T TIGR02821 102 FYVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIVAPSRCPWG 181 (275)
T ss_pred ccccCCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCccCcccCcch
Confidence 0112 23346777777776 35578999999999999999999999999999999887653211000
Q ss_pred HhhhhccchhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhh--hhheeeeEEEcCCCccCCH-HHHHHHHHHhc---C
Q 024228 156 AALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYK--HILEKIHLLWGENDKIFDM-QVARNLKEQVG---Q 229 (270)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~P~l~i~g~~D~~~~~-~~~~~~~~~~~---~ 229 (270)
.......+ ......... ..+..... ....|+++.+|++|+.++. .....+.+.+. .
T Consensus 182 -------~~~~~~~l-~~~~~~~~~----------~~~~~~~~~~~~~~plli~~G~~D~~v~~~~~~~~~~~~l~~~g~ 243 (275)
T TIGR02821 182 -------QKAFSAYL-GADEAAWRS----------YDASLLVADGGRHSTILIDQGTADQFLDEQLRPDAFEQACRAAGQ 243 (275)
T ss_pred -------HHHHHHHh-cccccchhh----------cchHHHHhhcccCCCeeEeecCCCcccCccccHHHHHHHHHHcCC
Confidence 00000000 000000000 00111111 1237899999999999997 44555555443 3
Q ss_pred CceEEEecCCCcceee
Q 024228 230 NATMESIEKAGHLVNL 245 (270)
Q Consensus 230 ~~~~~~~~~~gH~~~~ 245 (270)
.+++.+++|++|.+..
T Consensus 244 ~v~~~~~~g~~H~f~~ 259 (275)
T TIGR02821 244 ALTLRRQAGYDHSYYF 259 (275)
T ss_pred CeEEEEeCCCCccchh
Confidence 5789999999998853
No 73
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.85 E-value=9.2e-20 Score=126.15 Aligned_cols=210 Identities=17% Similarity=0.154 Sum_probs=139.0
Q ss_pred CCCceEEEeCCCCCcccc-cHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCC-c--eEEE
Q 024228 43 TKKHAVVLLHPFGFDGIL-TWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVE-K--CTLV 117 (270)
Q Consensus 43 ~~~~~vv~~hG~~~~~~~-~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~-~--~~l~ 117 (270)
++...+|++||+-++... ....++..|.+. +.++.+|++|.|+|............++|+..+++++... + -+++
T Consensus 31 gs~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~Gn~~~eadDL~sV~q~~s~~nr~v~vi~ 110 (269)
T KOG4667|consen 31 GSTEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYYGNYNTEADDLHSVIQYFSNSNRVVPVIL 110 (269)
T ss_pred CCceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccccCcccchHHHHHHHHHHhccCceEEEEEE
Confidence 346789999999998773 334567888888 9999999999999997765555556679999999998533 3 3578
Q ss_pred EEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhH-------hhhhccchhhhh----hcccccHHHHHHHHHhhh
Q 024228 118 GVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNA-------ALERIGYESWVD----FLLPKTADALKVQFDIAC 186 (270)
Q Consensus 118 G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~-------~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 186 (270)
|||-||.+++.+|.++++ +..+|-+++-.........+ +....++..... ....-....+...+.-..
T Consensus 111 gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl~~~I~eRlg~~~l~~ike~Gfid~~~rkG~y~~rvt~eSlmdrLntd~ 189 (269)
T KOG4667|consen 111 GHSKGGDVVLLYASKYHD-IRNVINCSGRYDLKNGINERLGEDYLERIKEQGFIDVGPRKGKYGYRVTEESLMDRLNTDI 189 (269)
T ss_pred eecCccHHHHHHHHhhcC-chheEEcccccchhcchhhhhcccHHHHHHhCCceecCcccCCcCceecHHHHHHHHhchh
Confidence 999999999999999987 88877777655443222111 111111111100 000001111111111111
Q ss_pred hcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHH
Q 024228 187 YKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILA 260 (270)
Q Consensus 187 ~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 260 (270)
. +...--+..||+|-+||..|.+||.+.+.++++.++ +.++.++||+.|.....+ .+.......|.+
T Consensus 190 h-----~aclkId~~C~VLTvhGs~D~IVPve~AkefAk~i~-nH~L~iIEgADHnyt~~q-~~l~~lgl~f~k 256 (269)
T KOG4667|consen 190 H-----EACLKIDKQCRVLTVHGSEDEIVPVEDAKEFAKIIP-NHKLEIIEGADHNYTGHQ-SQLVSLGLEFIK 256 (269)
T ss_pred h-----hhhcCcCccCceEEEeccCCceeechhHHHHHHhcc-CCceEEecCCCcCccchh-hhHhhhcceeEE
Confidence 0 111111222999999999999999999999999998 899999999999986543 334444445443
No 74
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.84 E-value=4.6e-18 Score=123.61 Aligned_cols=102 Identities=17% Similarity=0.126 Sum_probs=91.2
Q ss_pred CceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCC-CChHHHHHHHHHHHHHhCCC-ceEEEEEch
Q 024228 45 KHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPD-RTASFQAECMAKGLRKLGVE-KCTLVGVSY 121 (270)
Q Consensus 45 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~-~~~~~~~~~~~~~l~~~~~~-~~~l~G~S~ 121 (270)
..+||-+||.+|+.. .|..+.+.|.+. .+++.+++||+|.++..... ++-.+...-+.++++.++++ +++++|||.
T Consensus 35 ~gTVv~~hGsPGSH~-DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~~~~n~er~~~~~~ll~~l~i~~~~i~~gHSr 113 (297)
T PF06342_consen 35 LGTVVAFHGSPGSHN-DFKYIRPPLDEAGIRFIGINYPGFGFTPGYPDQQYTNEERQNFVNALLDELGIKGKLIFLGHSR 113 (297)
T ss_pred ceeEEEecCCCCCcc-chhhhhhHHHHcCeEEEEeCCCCCCCCCCCcccccChHHHHHHHHHHHHHcCCCCceEEEEecc
Confidence 348999999999999 999999999998 99999999999999976643 78888889999999999875 688899999
Q ss_pred hHHHHHHHHhhCccccccEEEecccCCC
Q 024228 122 GGMVGFKMAEMYPDLVESMVVTCSVMGL 149 (270)
Q Consensus 122 Gg~~a~~~a~~~p~~v~~~i~~~~~~~~ 149 (270)
||-.|+.+|..+| ..++++++|+...
T Consensus 114 Gcenal~la~~~~--~~g~~lin~~G~r 139 (297)
T PF06342_consen 114 GCENALQLAVTHP--LHGLVLINPPGLR 139 (297)
T ss_pred chHHHHHHHhcCc--cceEEEecCCccc
Confidence 9999999999996 6799999988653
No 75
>PLN00021 chlorophyllase
Probab=99.83 E-value=7.8e-19 Score=134.70 Aligned_cols=186 Identities=14% Similarity=0.131 Sum_probs=120.3
Q ss_pred CeEEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHH-
Q 024228 31 GTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRK- 108 (270)
Q Consensus 31 g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~- 108 (270)
+..+.++.+....+.|+||++||++.+.. .|..+++.|+++ |.|+++|++|++.+.......+.....+.+.+.++.
T Consensus 38 ~~p~~v~~P~~~g~~PvVv~lHG~~~~~~-~y~~l~~~Las~G~~VvapD~~g~~~~~~~~~i~d~~~~~~~l~~~l~~~ 116 (313)
T PLN00021 38 PKPLLVATPSEAGTYPVLLFLHGYLLYNS-FYSQLLQHIASHGFIVVAPQLYTLAGPDGTDEIKDAAAVINWLSSGLAAV 116 (313)
T ss_pred CceEEEEeCCCCCCCCEEEEECCCCCCcc-cHHHHHHHHHhCCCEEEEecCCCcCCCCchhhHHHHHHHHHHHHhhhhhh
Confidence 45566666665566799999999999988 999999999988 999999999865332111001112222222222222
Q ss_pred ------hCCCceEEEEEchhHHHHHHHHhhCcc-----ccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccHHH
Q 024228 109 ------LGVEKCTLVGVSYGGMVGFKMAEMYPD-----LVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADA 177 (270)
Q Consensus 109 ------~~~~~~~l~G~S~Gg~~a~~~a~~~p~-----~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (270)
.+.++++++|||+||.+++.+|..+++ +++++|+++|......... . .+..
T Consensus 117 l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g~~~~~~--~-------------~p~i--- 178 (313)
T PLN00021 117 LPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDGTSKGKQ--T-------------PPPV--- 178 (313)
T ss_pred cccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeeccccccccccC--C-------------CCcc---
Confidence 234689999999999999999998874 5889999988654321000 0 0000
Q ss_pred HHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCc-----c----CCHH-HHHHHHHHhcCCceEEEecCCCcceeecc
Q 024228 178 LKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDK-----I----FDMQ-VARNLKEQVGQNATMESIEKAGHLVNLER 247 (270)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~-----~----~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 247 (270)
+ .+.. ...++.+|+|++.+..|. . .|.. ...++++..+..+...+++++||+.+++.
T Consensus 179 ----l---~~~~------~s~~~~~P~liig~g~~~~~~~~~~p~~ap~~~~~~~f~~~~~~~~~~~~~~~~gH~~~~~~ 245 (313)
T PLN00021 179 ----L---TYAP------HSFNLDIPVLVIGTGLGGEPRNPLFPPCAPDGVNHAEFFNECKAPAVHFVAKDYGHMDMLDD 245 (313)
T ss_pred ----c---ccCc------ccccCCCCeEEEecCCCcccccccccccCCCCCCHHHHHHhcCCCeeeeeecCCCcceeecC
Confidence 0 0000 001123899999998763 2 2233 33667777766788999999999998754
Q ss_pred h
Q 024228 248 P 248 (270)
Q Consensus 248 ~ 248 (270)
.
T Consensus 246 ~ 246 (313)
T PLN00021 246 D 246 (313)
T ss_pred C
Confidence 3
No 76
>PLN02442 S-formylglutathione hydrolase
Probab=99.82 E-value=4e-18 Score=130.13 Aligned_cols=197 Identities=15% Similarity=0.186 Sum_probs=115.4
Q ss_pred eEEEEEecCC--CCCCceEEEeCCCCCcccccHHH---HHHHhhcc-ceEEeecCCCCCCC-----CC-----C------
Q 024228 32 TILNIWVPKK--TTKKHAVVLLHPFGFDGILTWQF---QVLALAKT-YEVYVPDFLFFGSS-----VT-----D------ 89 (270)
Q Consensus 32 ~~l~~~~~~~--~~~~~~vv~~hG~~~~~~~~~~~---~~~~l~~~-~~v~~~d~~g~G~s-----~~-----~------ 89 (270)
..+.++.|.. ..+.|+|+++||++++.. .|.. +...+... +.|+.+|..++|.. .. .
T Consensus 32 ~~~~vy~P~~~~~~~~Pvv~~lHG~~~~~~-~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~ 110 (283)
T PLN02442 32 MTFSVYFPPASDSGKVPVLYWLSGLTCTDE-NFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLN 110 (283)
T ss_pred eEEEEEcCCcccCCCCCEEEEecCCCcChH-HHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcceeec
Confidence 3344455542 235689999999998877 6644 33555655 99999998776621 10 0
Q ss_pred --CC----CCChHHHHHHHH----HHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhh
Q 024228 90 --RP----DRTASFQAECMA----KGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALE 159 (270)
Q Consensus 90 --~~----~~~~~~~~~~~~----~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~ 159 (270)
.. ....+...+++. ...+.++.++++++||||||..|+.++.++|+++++++.+++...........
T Consensus 111 ~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~~~~~~~~--- 187 (283)
T PLN02442 111 ATQEKWKNWRMYDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIANPINCPWGQ--- 187 (283)
T ss_pred cccCCCcccchhhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCccCcccCchhh---
Confidence 00 001122333333 33344577889999999999999999999999999999998876532110000
Q ss_pred hccchhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHH-HHHHHHHHh---cCCceEEE
Q 024228 160 RIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQ-VARNLKEQV---GQNATMES 235 (270)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~-~~~~~~~~~---~~~~~~~~ 235 (270)
......+ ........+. . ...+........+|+++++|++|.+++.. ..+.+.+.+ ..++++++
T Consensus 188 ----~~~~~~~-g~~~~~~~~~------d-~~~~~~~~~~~~~pvli~~G~~D~~v~~~~~s~~~~~~l~~~g~~~~~~~ 255 (283)
T PLN02442 188 ----KAFTNYL-GSDKADWEEY------D-ATELVSKFNDVSATILIDQGEADKFLKEQLLPENFEEACKEAGAPVTLRL 255 (283)
T ss_pred ----HHHHHHc-CCChhhHHHc------C-hhhhhhhccccCCCEEEEECCCCccccccccHHHHHHHHHHcCCCeEEEE
Confidence 0000001 1110000000 0 00011111223489999999999998853 244444433 24688999
Q ss_pred ecCCCccee
Q 024228 236 IEKAGHLVN 244 (270)
Q Consensus 236 ~~~~gH~~~ 244 (270)
+++.+|...
T Consensus 256 ~pg~~H~~~ 264 (283)
T PLN02442 256 QPGYDHSYF 264 (283)
T ss_pred eCCCCccHH
Confidence 999999865
No 77
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.82 E-value=1.7e-18 Score=134.01 Aligned_cols=231 Identities=13% Similarity=0.072 Sum_probs=130.5
Q ss_pred ceeEEEeecCCeEEEE--EecCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHH
Q 024228 21 MTQRTIEIEPGTILNI--WVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASF 97 (270)
Q Consensus 21 ~~~~~i~~~~g~~l~~--~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~ 97 (270)
+++..|+.. |..|.. ..+....+.|+||++.|+.+...+.|..+.+.|..+ +.++++|.||.|.|.......+.+.
T Consensus 165 i~~v~iP~e-g~~I~g~LhlP~~~~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~~D~~~ 243 (411)
T PF06500_consen 165 IEEVEIPFE-GKTIPGYLHLPSGEKPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLTQDSSR 243 (411)
T ss_dssp EEEEEEEET-TCEEEEEEEESSSSS-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S-S-CCH
T ss_pred cEEEEEeeC-CcEEEEEEEcCCCCCCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCCCcCHHH
Confidence 566667775 566643 344443455778888888777763455555677766 9999999999999875544444455
Q ss_pred HHHHHHHHHHHh---CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhc---cchhhhhhc-
Q 024228 98 QAECMAKGLRKL---GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERI---GYESWVDFL- 170 (270)
Q Consensus 98 ~~~~~~~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~- 170 (270)
+...+.+.+... +..+|.++|.|+||++|.++|...++|++++|..+++...--... ...... ........+
T Consensus 244 l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~ft~~-~~~~~~P~my~d~LA~rlG 322 (411)
T PF06500_consen 244 LHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHHFFTDP-EWQQRVPDMYLDVLASRLG 322 (411)
T ss_dssp HHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---SCGGH-H-HHHTTS-HHHHHHHHHHCT
T ss_pred HHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHhhhhccH-HHHhcCCHHHHHHHHHHhC
Confidence 666666666654 345899999999999999999988889999999998754321110 111111 011111111
Q ss_pred -ccccHHHHHHHHHhhhhcCCCChhhhh--hhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCC-cceeec
Q 024228 171 -LPKTADALKVQFDIACYKLPTLPAFVY--KHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAG-HLVNLE 246 (270)
Q Consensus 171 -~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~g-H~~~~~ 246 (270)
.......+...+.... .....++ ++..+|+|.+.+++|+++|.+..+-++..-. +.+...++... |..
T Consensus 323 ~~~~~~~~l~~el~~~S----Lk~qGlL~~rr~~~plL~i~~~~D~v~P~eD~~lia~~s~-~gk~~~~~~~~~~~g--- 394 (411)
T PF06500_consen 323 MAAVSDESLRGELNKFS----LKTQGLLSGRRCPTPLLAINGEDDPVSPIEDSRLIAESST-DGKALRIPSKPLHMG--- 394 (411)
T ss_dssp -SCE-HHHHHHHGGGGS----TTTTTTTTSS-BSS-EEEEEETT-SSS-HHHHHHHHHTBT-T-EEEEE-SSSHHHH---
T ss_pred CccCCHHHHHHHHHhcC----cchhccccCCCCCcceEEeecCCCCCCCHHHHHHHHhcCC-CCceeecCCCccccc---
Confidence 0111222222221111 1122223 4445899999999999999999888887765 67788887543 332
Q ss_pred chHhHHHHHHHHHHhh
Q 024228 247 RPFVYNRQLKTILASL 262 (270)
Q Consensus 247 ~~~~~~~~i~~fl~~~ 262 (270)
-+.-...+.+||++.
T Consensus 395 -y~~al~~~~~Wl~~~ 409 (411)
T PF06500_consen 395 -YPQALDEIYKWLEDK 409 (411)
T ss_dssp -HHHHHHHHHHHHHHH
T ss_pred -hHHHHHHHHHHHHHh
Confidence 234567788888764
No 78
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.81 E-value=1.4e-17 Score=128.15 Aligned_cols=243 Identities=15% Similarity=0.103 Sum_probs=145.2
Q ss_pred CceeEEEeecCCeEEEEEec--CCC------CCCceEEEeCCCCCcccccH-HHHHHHhhcc-ceEEeecCCCCCCCCCC
Q 024228 20 GMTQRTIEIEPGTILNIWVP--KKT------TKKHAVVLLHPFGFDGILTW-QFQVLALAKT-YEVYVPDFLFFGSSVTD 89 (270)
Q Consensus 20 ~~~~~~i~~~~g~~l~~~~~--~~~------~~~~~vv~~hG~~~~~~~~~-~~~~~~l~~~-~~v~~~d~~g~G~s~~~ 89 (270)
..++..++++||..+.+-.. ... ...|+||++||+.+++.+.| +.++..+.+. |++++++.||+|.+.-.
T Consensus 92 ~y~Reii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~Lt 171 (409)
T KOG1838|consen 92 EYTREIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSKLT 171 (409)
T ss_pred cceeEEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCccC
Confidence 45788899999988876322 221 35699999999988777344 4455555555 99999999999999876
Q ss_pred CCCCChHHHHHHHHHHHHHh----CCCceEEEEEchhHHHHHHHHhhCcc---ccccEEEecccCCC--Cchhh----hH
Q 024228 90 RPDRTASFQAECMAKGLRKL----GVEKCTLVGVSYGGMVGFKMAEMYPD---LVESMVVTCSVMGL--TESVS----NA 156 (270)
Q Consensus 90 ~~~~~~~~~~~~~~~~l~~~----~~~~~~l~G~S~Gg~~a~~~a~~~p~---~v~~~i~~~~~~~~--~~~~~----~~ 156 (270)
.+......+.+|+.++++++ ...++..+|.||||.+.+.|..+..+ .+.++++.+|+-.. ..... ..
T Consensus 172 Tpr~f~ag~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~~~~~~~~~~~~~~ 251 (409)
T KOG1838|consen 172 TPRLFTAGWTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLLAASRSIETPLYRR 251 (409)
T ss_pred CCceeecCCHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhhhhhhHHhcccchH
Confidence 65544444567777777665 44589999999999999999987643 24455555554321 11100 00
Q ss_pred hhhhccchhhh------------------hhcccccHHHHHHHHHhhhhc--------CCCChhhhhhhhheeeeEEEcC
Q 024228 157 ALERIGYESWV------------------DFLLPKTADALKVQFDIACYK--------LPTLPAFVYKHILEKIHLLWGE 210 (270)
Q Consensus 157 ~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~P~l~i~g~ 210 (270)
........... ......+...+.+.+....+. ....+...+.++.+|+|+|++.
T Consensus 252 ~y~~~l~~~l~~~~~~~r~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~gf~~~deYY~~aSs~~~v~~I~VP~L~ina~ 331 (409)
T KOG1838|consen 252 FYNRALTLNLKRIVLRHRHTLFEDPVDFDVILKSRSVREFDEALTRPMFGFKSVDEYYKKASSSNYVDKIKVPLLCINAA 331 (409)
T ss_pred HHHHHHHHhHHHHHhhhhhhhhhccchhhhhhhcCcHHHHHhhhhhhhcCCCcHHHHHhhcchhhhcccccccEEEEecC
Confidence 00000000000 000111112222222111111 1112223344555999999999
Q ss_pred CCccCCHHHH-HHHHHHhcCCceEEEecCCCcceeecc----hHhHHHH-HHHHHHhhh
Q 024228 211 NDKIFDMQVA-RNLKEQVGQNATMESIEKAGHLVNLER----PFVYNRQ-LKTILASLV 263 (270)
Q Consensus 211 ~D~~~~~~~~-~~~~~~~~~~~~~~~~~~~gH~~~~~~----~~~~~~~-i~~fl~~~~ 263 (270)
+|+++|++.. .......+ ++-+++-..+||..++|. +....+. +.+|+....
T Consensus 332 DDPv~p~~~ip~~~~~~np-~v~l~~T~~GGHlgfleg~~p~~~~w~~~~l~ef~~~~~ 389 (409)
T KOG1838|consen 332 DDPVVPEEAIPIDDIKSNP-NVLLVITSHGGHLGFLEGLWPSARTWMDKLLVEFLGNAI 389 (409)
T ss_pred CCCCCCcccCCHHHHhcCC-cEEEEEeCCCceeeeeccCCCccchhHHHHHHHHHHHHH
Confidence 9999997533 22233333 777777788899999876 2333344 777877654
No 79
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.81 E-value=4.1e-17 Score=118.52 Aligned_cols=239 Identities=15% Similarity=0.155 Sum_probs=164.6
Q ss_pred ceeEEEeecCCeEEEEEecCCC-CCCceEEEeCCCCCcccccHHHH-----HHHhhccceEEeecCCCCCCCCCCC----
Q 024228 21 MTQRTIEIEPGTILNIWVPKKT-TKKHAVVLLHPFGFDGILTWQFQ-----VLALAKTYEVYVPDFLFFGSSVTDR---- 90 (270)
Q Consensus 21 ~~~~~i~~~~g~~l~~~~~~~~-~~~~~vv~~hG~~~~~~~~~~~~-----~~~l~~~~~v~~~d~~g~G~s~~~~---- 90 (270)
.+++.|.+.- ..+++...|.. +++|++|-.|..+.+....|+.+ +..+.+++-++-+|.||+-......
T Consensus 22 ~~e~~V~T~~-G~v~V~V~Gd~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~fcv~HV~~PGqe~gAp~~p~~y 100 (326)
T KOG2931|consen 22 CQEHDVETAH-GVVHVTVYGDPKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEHFCVYHVDAPGQEDGAPSFPEGY 100 (326)
T ss_pred ceeeeecccc-ccEEEEEecCCCCCCceEEEecccccchHhHhHHhhcCHhHHHHHhheEEEecCCCccccCCccCCCCC
Confidence 6788888864 45666666653 36889999999999988447665 3556667999999999996554322
Q ss_pred CCCChHHHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhc-------cc
Q 024228 91 PDRTASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERI-------GY 163 (270)
Q Consensus 91 ~~~~~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~-------~~ 163 (270)
...+.++++++|..++++++.+.++-+|...|+++..++|..+|++|.++|++++.+....+......... +.
T Consensus 101 ~yPsmd~LAd~l~~VL~~f~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~gwiew~~~K~~s~~l~~~Gm 180 (326)
T KOG2931|consen 101 PYPSMDDLADMLPEVLDHFGLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCAKGWIEWAYNKVSSNLLYYYGM 180 (326)
T ss_pred CCCCHHHHHHHHHHHHHhcCcceEEEecccccHHHHHHHHhcChhheeEEEEEecCCCCchHHHHHHHHHHHHHHHhhch
Confidence 23789999999999999999999999999999999999999999999999999988765544322211111 11
Q ss_pred hhh-hhh-----c----ccc----------------cHHHHHHHHHhhhhcCCCC--hhhhhhhhheeeeEEEcCCCccC
Q 024228 164 ESW-VDF-----L----LPK----------------TADALKVQFDIACYKLPTL--PAFVYKHILEKIHLLWGENDKIF 215 (270)
Q Consensus 164 ~~~-~~~-----~----~~~----------------~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~P~l~i~g~~D~~~ 215 (270)
... ... + ... ....+..++.....+.... .......+.||+|++.|++.+.+
T Consensus 181 t~~~~d~ll~H~Fg~e~~~~~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R~DL~~~r~~~~~tlkc~vllvvGd~Sp~~ 260 (326)
T KOG2931|consen 181 TQGVKDYLLAHHFGKEELGNNSDIVQEYRQHLGERLNPKNLALFLNAYNGRRDLSIERPKLGTTLKCPVLLVVGDNSPHV 260 (326)
T ss_pred hhhHHHHHHHHHhccccccccHHHHHHHHHHHHhcCChhHHHHHHHHhcCCCCccccCCCcCccccccEEEEecCCCchh
Confidence 100 000 0 000 1111222222222111100 00111144499999999999875
Q ss_pred CHHHHHHHHHHhc-CCceEEEecCCCcceeecchHhHHHHHHHHHHhh
Q 024228 216 DMQVARNLKEQVG-QNATMESIEKAGHLVNLERPFVYNRQLKTILASL 262 (270)
Q Consensus 216 ~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 262 (270)
. .+..+..++. .+.++..+.++|-.+..++|..+++.+.=|++..
T Consensus 261 ~--~vv~~n~~Ldp~~ttllk~~d~g~l~~e~qP~kl~ea~~~FlqG~ 306 (326)
T KOG2931|consen 261 S--AVVECNSKLDPTYTTLLKMADCGGLVQEEQPGKLAEAFKYFLQGM 306 (326)
T ss_pred h--hhhhhhcccCcccceEEEEcccCCcccccCchHHHHHHHHHHccC
Confidence 3 4555555554 5688999999999999899999999999999754
No 80
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.80 E-value=4.3e-18 Score=124.90 Aligned_cols=169 Identities=15% Similarity=0.117 Sum_probs=100.8
Q ss_pred CCCceEEEeCCCCCcccccHH---HHHHHhhcc-ceEEeecCCCCCCCCCCC-----CC-CChHHHHHHHHHHHHH----
Q 024228 43 TKKHAVVLLHPFGFDGILTWQ---FQVLALAKT-YEVYVPDFLFFGSSVTDR-----PD-RTASFQAECMAKGLRK---- 108 (270)
Q Consensus 43 ~~~~~vv~~hG~~~~~~~~~~---~~~~~l~~~-~~v~~~d~~g~G~s~~~~-----~~-~~~~~~~~~~~~~l~~---- 108 (270)
++.|+||++||.+++.. .+. .+...+.+. |.|+++|++|++.+.... .. ........++..+++.
T Consensus 11 ~~~P~vv~lHG~~~~~~-~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 89 (212)
T TIGR01840 11 GPRALVLALHGCGQTAS-AYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKAN 89 (212)
T ss_pred CCCCEEEEeCCCCCCHH-HHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHh
Confidence 45789999999998877 554 244444444 999999999987543211 00 0001122333333333
Q ss_pred h--CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccHHHHHHHHHhhh
Q 024228 109 L--GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIAC 186 (270)
Q Consensus 109 ~--~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (270)
. +.++++|+|||+||.+++.++.++|+.+.+++.+++................ ........+........
T Consensus 90 ~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~ 161 (212)
T TIGR01840 90 YSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLPYGEASSSISATPQM--------CTAATAASVCRLVRGMQ 161 (212)
T ss_pred cCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCcccccccchhhHhhc--------CCCCCHHHHHHHHhccC
Confidence 2 3358999999999999999999999999999888876532211111100000 01111122222221110
Q ss_pred hcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc
Q 024228 187 YKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG 228 (270)
Q Consensus 187 ~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~ 228 (270)
.. ......|++++||++|.+||++.++.+.+.+.
T Consensus 162 ~~--------~~~~~p~~~i~hG~~D~vVp~~~~~~~~~~l~ 195 (212)
T TIGR01840 162 SE--------YNGPTPIMSVVHGDADYTVLPGNADEIRDAML 195 (212)
T ss_pred Cc--------ccCCCCeEEEEEcCCCceeCcchHHHHHHHHH
Confidence 00 01111457899999999999999888887765
No 81
>PRK10162 acetyl esterase; Provisional
Probab=99.80 E-value=3.8e-17 Score=126.87 Aligned_cols=227 Identities=15% Similarity=0.093 Sum_probs=132.1
Q ss_pred eeEEEeecCC-eEEEEEecCCCCCCceEEEeCCCC---CcccccHHHHHHHhhcc--ceEEeecCCCCCCCCCCCCCCCh
Q 024228 22 TQRTIEIEPG-TILNIWVPKKTTKKHAVVLLHPFG---FDGILTWQFQVLALAKT--YEVYVPDFLFFGSSVTDRPDRTA 95 (270)
Q Consensus 22 ~~~~i~~~~g-~~l~~~~~~~~~~~~~vv~~hG~~---~~~~~~~~~~~~~l~~~--~~v~~~d~~g~G~s~~~~~~~~~ 95 (270)
+...+...+| ..+.++.+.. .+.|+||++||++ ++.. .|..+++.|++. +.|+++|+|...+...+. ..
T Consensus 58 ~~~~i~~~~g~i~~~~y~P~~-~~~p~vv~~HGGg~~~g~~~-~~~~~~~~la~~~g~~Vv~vdYrlape~~~p~---~~ 132 (318)
T PRK10162 58 RAYMVPTPYGQVETRLYYPQP-DSQATLFYLHGGGFILGNLD-THDRIMRLLASYSGCTVIGIDYTLSPEARFPQ---AI 132 (318)
T ss_pred EEEEEecCCCceEEEEECCCC-CCCCEEEEEeCCcccCCCch-hhhHHHHHHHHHcCCEEEEecCCCCCCCCCCC---cH
Confidence 3444555455 4555555543 3468999999987 4445 777888888774 999999999755433221 23
Q ss_pred HHH---HHHHHHHHHHhC--CCceEEEEEchhHHHHHHHHhhC------ccccccEEEecccCCCCchhhhHhhhhccch
Q 024228 96 SFQ---AECMAKGLRKLG--VEKCTLVGVSYGGMVGFKMAEMY------PDLVESMVVTCSVMGLTESVSNAALERIGYE 164 (270)
Q Consensus 96 ~~~---~~~~~~~l~~~~--~~~~~l~G~S~Gg~~a~~~a~~~------p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~ 164 (270)
++. .+.+.+..+.++ .++++|+|+|+||.+|+.++... +.++++++++.|............... ..
T Consensus 133 ~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~s~~~~~~-~~- 210 (318)
T PRK10162 133 EEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGLRDSVSRRLLGG-VW- 210 (318)
T ss_pred HHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCCCCChhHHHhCC-Cc-
Confidence 332 223333333444 35899999999999999988753 357899999988765432111000000 00
Q ss_pred hhhhhcccccHHHHHHHHHhhhh----cCCCC--h-hhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc---CCceEE
Q 024228 165 SWVDFLLPKTADALKVQFDIACY----KLPTL--P-AFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG---QNATME 234 (270)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~--~-~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~ 234 (270)
..+ ....+..+...... ..... + ...+..-..|+++++|+.|++.+ ..+.+.+.+. ..++++
T Consensus 211 ---~~l---~~~~~~~~~~~y~~~~~~~~~p~~~p~~~~l~~~lPp~~i~~g~~D~L~d--e~~~~~~~L~~aGv~v~~~ 282 (318)
T PRK10162 211 ---DGL---TQQDLQMYEEAYLSNDADRESPYYCLFNNDLTRDVPPCFIAGAEFDPLLD--DSRLLYQTLAAHQQPCEFK 282 (318)
T ss_pred ---ccc---CHHHHHHHHHHhCCCccccCCcccCcchhhhhcCCCCeEEEecCCCcCcC--hHHHHHHHHHHcCCCEEEE
Confidence 000 01111111111000 00000 0 01111223799999999999875 4556665554 258999
Q ss_pred EecCCCcceee-----cchHhHHHHHHHHHHhhh
Q 024228 235 SIEKAGHLVNL-----ERPFVYNRQLKTILASLV 263 (270)
Q Consensus 235 ~~~~~gH~~~~-----~~~~~~~~~i~~fl~~~~ 263 (270)
+++|..|.+.. +..++..+.+.+||++..
T Consensus 283 ~~~g~~H~f~~~~~~~~~a~~~~~~~~~~l~~~~ 316 (318)
T PRK10162 283 LYPGTLHAFLHYSRMMDTADDALRDGAQFFTAQL 316 (318)
T ss_pred EECCCceehhhccCchHHHHHHHHHHHHHHHHHh
Confidence 99999998753 223456777888887653
No 82
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.78 E-value=1.2e-16 Score=122.87 Aligned_cols=228 Identities=15% Similarity=0.061 Sum_probs=127.4
Q ss_pred EeecCCeEEEE--EecC-CCCCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCC-CCCCC-------C---
Q 024228 26 IEIEPGTILNI--WVPK-KTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGS-SVTDR-------P--- 91 (270)
Q Consensus 26 i~~~~g~~l~~--~~~~-~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~-s~~~~-------~--- 91 (270)
+...+|..++- ..+. ..++.|.||.+||.++... .|..........|.++.+|.||.|. +.... .
T Consensus 61 f~s~~g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~-~~~~~~~~a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~ 139 (320)
T PF05448_consen 61 FESFDGSRVYGWLYRPKNAKGKLPAVVQFHGYGGRSG-DPFDLLPWAAAGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHI 139 (320)
T ss_dssp EEEGGGEEEEEEEEEES-SSSSEEEEEEE--TT--GG-GHHHHHHHHHTT-EEEEE--TTTSSSS-B-SSBSSS-SSSST
T ss_pred EEccCCCEEEEEEEecCCCCCCcCEEEEecCCCCCCC-CcccccccccCCeEEEEecCCCCCCCCCCccccCCCCCccHH
Confidence 33347888864 4454 3345689999999999877 7766665555559999999999993 21110 0
Q ss_pred ---CCC------hHHHHHHHHHHHHHh------CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhH
Q 024228 92 ---DRT------ASFQAECMAKGLRKL------GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNA 156 (270)
Q Consensus 92 ---~~~------~~~~~~~~~~~l~~~------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~ 156 (270)
..+ ...+..|....++.+ +.+++.+.|.|+||.+++.+|+..+ +|++++...|...........
T Consensus 140 ~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~vP~l~d~~~~~~~ 218 (320)
T PF05448_consen 140 TRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAADVPFLCDFRRALEL 218 (320)
T ss_dssp TTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEESESSSSHHHHHHH
T ss_pred hcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEecCCCccchhhhhhc
Confidence 011 112344555555543 3458999999999999999999886 699999988765422111111
Q ss_pred hhhhccchhhhhhcc--cccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEE
Q 024228 157 ALERIGYESWVDFLL--PKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATME 234 (270)
Q Consensus 157 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~ 234 (270)
.........+..++. ........+.+....+ .......+.+.+|+++-.|-.|.++|+...-..++.++..+++.
T Consensus 219 ~~~~~~y~~~~~~~~~~d~~~~~~~~v~~~L~Y---~D~~nfA~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~~~K~l~ 295 (320)
T PF05448_consen 219 RADEGPYPEIRRYFRWRDPHHEREPEVFETLSY---FDAVNFARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIPGPKELV 295 (320)
T ss_dssp T--STTTHHHHHHHHHHSCTHCHHHHHHHHHHT---T-HHHHGGG--SEEEEEEETT-SSS-HHHHHHHHCC--SSEEEE
T ss_pred CCccccHHHHHHHHhccCCCcccHHHHHHHHhh---hhHHHHHHHcCCCEEEEEecCCCCCCchhHHHHHhccCCCeeEE
Confidence 110111111111111 0011111122211111 12334455666999999999999999999999999998789999
Q ss_pred EecCCCcceeecchHhH-HHHHHHHHHhh
Q 024228 235 SIEKAGHLVNLERPFVY-NRQLKTILASL 262 (270)
Q Consensus 235 ~~~~~gH~~~~~~~~~~-~~~i~~fl~~~ 262 (270)
+++..||... .+. .+...+||.++
T Consensus 296 vyp~~~He~~----~~~~~~~~~~~l~~~ 320 (320)
T PF05448_consen 296 VYPEYGHEYG----PEFQEDKQLNFLKEH 320 (320)
T ss_dssp EETT--SSTT----HHHHHHHHHHHHHH-
T ss_pred eccCcCCCch----hhHHHHHHHHHHhcC
Confidence 9999999653 333 57777887653
No 83
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.78 E-value=2e-17 Score=115.69 Aligned_cols=157 Identities=15% Similarity=0.198 Sum_probs=104.9
Q ss_pred EEEeCCCCCcccccHHHHH-HHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEEchhHHHH
Q 024228 48 VVLLHPFGFDGILTWQFQV-LALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVSYGGMVG 126 (270)
Q Consensus 48 vv~~hG~~~~~~~~~~~~~-~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a 126 (270)
|+++||++++....|.... +.|...++|-.+++ ...+.+.+...+.+.+..++ ++++|||||+|+..+
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~~~V~~~~~----------~~P~~~~W~~~l~~~i~~~~-~~~ilVaHSLGc~~~ 69 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENSVRVEQPDW----------DNPDLDEWVQALDQAIDAID-EPTILVAHSLGCLTA 69 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTSEEEEEC------------TS--HHHHHHHHHHCCHC-T-TTEEEEEETHHHHHH
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCCeEEecccc----------CCCCHHHHHHHHHHHHhhcC-CCeEEEEeCHHHHHH
Confidence 6899999998776787765 55655577776665 22467888888888777664 579999999999999
Q ss_pred HHHH-hhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhheeee
Q 024228 127 FKMA-EMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEKIH 205 (270)
Q Consensus 127 ~~~a-~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l 205 (270)
+.++ .....+|+++++++|+............. .+..........|.+
T Consensus 70 l~~l~~~~~~~v~g~lLVAp~~~~~~~~~~~~~~-------------------------------~f~~~p~~~l~~~~~ 118 (171)
T PF06821_consen 70 LRWLAEQSQKKVAGALLVAPFDPDDPEPFPPELD-------------------------------GFTPLPRDPLPFPSI 118 (171)
T ss_dssp HHHHHHTCCSSEEEEEEES--SCGCHHCCTCGGC-------------------------------CCTTSHCCHHHCCEE
T ss_pred HHHHhhcccccccEEEEEcCCCcccccchhhhcc-------------------------------ccccCcccccCCCeE
Confidence 9999 66778999999999875421000000000 000000112227789
Q ss_pred EEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecch
Q 024228 206 LLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERP 248 (270)
Q Consensus 206 ~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~ 248 (270)
++.+++|+++|.+.++.+++.+ +++++.++++||+...+.-
T Consensus 119 viaS~nDp~vp~~~a~~~A~~l--~a~~~~~~~~GHf~~~~G~ 159 (171)
T PF06821_consen 119 VIASDNDPYVPFERAQRLAQRL--GAELIILGGGGHFNAASGF 159 (171)
T ss_dssp EEEETTBSSS-HHHHHHHHHHH--T-EEEEETS-TTSSGGGTH
T ss_pred EEEcCCCCccCHHHHHHHHHHc--CCCeEECCCCCCcccccCC
Confidence 9999999999999999999999 7999999999998865443
No 84
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.77 E-value=2e-17 Score=121.69 Aligned_cols=178 Identities=19% Similarity=0.230 Sum_probs=106.2
Q ss_pred CCCCCceEEEeCCCCCcccccHHHHHHH-hhcc-ceEEeecCCC------CCC---CCCCC----CC--CChH---HHHH
Q 024228 41 KTTKKHAVVLLHPFGFDGILTWQFQVLA-LAKT-YEVYVPDFLF------FGS---SVTDR----PD--RTAS---FQAE 100 (270)
Q Consensus 41 ~~~~~~~vv~~hG~~~~~~~~~~~~~~~-l~~~-~~v~~~d~~g------~G~---s~~~~----~~--~~~~---~~~~ 100 (270)
..+..++||++||+|++.. .+..+... +... ..+++++-|. .|. +-... .. .+.+ ..++
T Consensus 10 ~~~~~~lvi~LHG~G~~~~-~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~ 88 (216)
T PF02230_consen 10 KGKAKPLVILLHGYGDSED-LFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAE 88 (216)
T ss_dssp SST-SEEEEEE--TTS-HH-HHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHH
T ss_pred CCCCceEEEEECCCCCCcc-hhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHH
Confidence 3356789999999999987 77665552 2222 6677765432 222 11110 00 1122 2233
Q ss_pred HHHHHHHHh-----CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccH
Q 024228 101 CMAKGLRKL-----GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTA 175 (270)
Q Consensus 101 ~~~~~l~~~-----~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (270)
.+.++++.. +.++++|.|+|.||.+|+.++.++|+.+.++|.+++............
T Consensus 89 ~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~~~~~~------------------ 150 (216)
T PF02230_consen 89 RLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESELEDRP------------------ 150 (216)
T ss_dssp HHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCCCHCCH------------------
T ss_pred HHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccccccccccccc------------------
Confidence 444444432 446899999999999999999999999999999998765321110000
Q ss_pred HHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc---CCceEEEecCCCcceeecchHhHH
Q 024228 176 DALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG---QNATMESIEKAGHLVNLERPFVYN 252 (270)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~~~~~~~~~~ 252 (270)
. . .. .+|++++||++|+++|.+.++...+.+. .+.+++.+++.||... .+..
T Consensus 151 ------------~-~------~~--~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i~----~~~~ 205 (216)
T PF02230_consen 151 ------------E-A------LA--KTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEIS----PEEL 205 (216)
T ss_dssp ------------C-C------CC--TS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS------HHHH
T ss_pred ------------c-c------cC--CCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCCC----HHHH
Confidence 0 0 00 1799999999999999998888888775 2578999999999874 3445
Q ss_pred HHHHHHHHhh
Q 024228 253 RQLKTILASL 262 (270)
Q Consensus 253 ~~i~~fl~~~ 262 (270)
+.+.+||+++
T Consensus 206 ~~~~~~l~~~ 215 (216)
T PF02230_consen 206 RDLREFLEKH 215 (216)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHhhh
Confidence 6788888764
No 85
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.77 E-value=5.1e-17 Score=119.91 Aligned_cols=183 Identities=19% Similarity=0.161 Sum_probs=117.7
Q ss_pred EecCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCC-----------ChHHHHHHHHH
Q 024228 37 WVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDR-----------TASFQAECMAK 104 (270)
Q Consensus 37 ~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~-----------~~~~~~~~~~~ 104 (270)
..+...++.|.||++|++.|-.. ..+.++..|++. |.|+++|+-+-.......... ..+....++.+
T Consensus 6 ~~P~~~~~~~~Vvv~~d~~G~~~-~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 84 (218)
T PF01738_consen 6 ARPEGGGPRPAVVVIHDIFGLNP-NIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQA 84 (218)
T ss_dssp EEETTSSSEEEEEEE-BTTBS-H-HHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHH
T ss_pred EeCCCCCCCCEEEEEcCCCCCch-HHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHH
Confidence 33444346799999999988776 778889999988 999999986433201111000 12345566656
Q ss_pred HHHHh---C---CCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccHHHH
Q 024228 105 GLRKL---G---VEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADAL 178 (270)
Q Consensus 105 ~l~~~---~---~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (270)
.++.+ . .+++.++|+|+||.+++.+|.+. +.+++.+...|......
T Consensus 85 a~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~~~~~--------------------------- 136 (218)
T PF01738_consen 85 AVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGSPPPP--------------------------- 136 (218)
T ss_dssp HHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SSSGGG---------------------------
T ss_pred HHHHHHhccccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCCCCCc---------------------------
Confidence 66655 2 35899999999999999999887 56999988877111000
Q ss_pred HHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc---CCceEEEecCCCcceeecc--------
Q 024228 179 KVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG---QNATMESIEKAGHLVNLER-------- 247 (270)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~~~~~-------- 247 (270)
+.....++.+|+++++|++|+.++.+..+.+.+.+. ...++++++|++|.+....
T Consensus 137 --------------~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga~HgF~~~~~~~~~~~a 202 (218)
T PF01738_consen 137 --------------PLEDAPKIKAPVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYPGAGHGFANPSRPPYDPAA 202 (218)
T ss_dssp --------------HHHHGGG--S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT--TTTTSTTSTT--HHH
T ss_pred --------------chhhhcccCCCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECCCCcccccCCCCcccCHHH
Confidence 001122333899999999999999998888888772 4789999999999997632
Q ss_pred hHhHHHHHHHHHHhh
Q 024228 248 PFVYNRQLKTILASL 262 (270)
Q Consensus 248 ~~~~~~~i~~fl~~~ 262 (270)
.+...+.+.+||+++
T Consensus 203 a~~a~~~~~~ff~~~ 217 (218)
T PF01738_consen 203 AEDAWQRTLAFFKRH 217 (218)
T ss_dssp HHHHHHHHHHHHCC-
T ss_pred HHHHHHHHHHHHHhc
Confidence 234556777887654
No 86
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.76 E-value=9e-17 Score=119.72 Aligned_cols=210 Identities=16% Similarity=0.153 Sum_probs=133.0
Q ss_pred ceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCC-ceEEEEEchhH
Q 024228 46 HAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVE-KCTLVGVSYGG 123 (270)
Q Consensus 46 ~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~l~G~S~Gg 123 (270)
++|+|+|+.+++.. .|..+++.|... +.|+.++++|.+ .......+++++++...+.|.....+ ++.|+|||+||
T Consensus 1 ~~lf~~p~~gG~~~-~y~~la~~l~~~~~~v~~i~~~~~~--~~~~~~~si~~la~~y~~~I~~~~~~gp~~L~G~S~Gg 77 (229)
T PF00975_consen 1 RPLFCFPPAGGSAS-SYRPLARALPDDVIGVYGIEYPGRG--DDEPPPDSIEELASRYAEAIRARQPEGPYVLAGWSFGG 77 (229)
T ss_dssp -EEEEESSTTCSGG-GGHHHHHHHTTTEEEEEEECSTTSC--TTSHEESSHHHHHHHHHHHHHHHTSSSSEEEEEETHHH
T ss_pred CeEEEEcCCccCHH-HHHHHHHhCCCCeEEEEEEecCCCC--CCCCCCCCHHHHHHHHHHHhhhhCCCCCeeehccCccH
Confidence 47999999999999 999999999998 999999999998 22334478999999998888877655 99999999999
Q ss_pred HHHHHHHhhC---ccccccEEEecccCCCCchhhhHhhhhcc-c-hhhhhhc-----cccc---HHHHHHHHHhhhhcCC
Q 024228 124 MVGFKMAEMY---PDLVESMVVTCSVMGLTESVSNAALERIG-Y-ESWVDFL-----LPKT---ADALKVQFDIACYKLP 190 (270)
Q Consensus 124 ~~a~~~a~~~---p~~v~~~i~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~-----~~~~---~~~~~~~~~~~~~~~~ 190 (270)
.+|..+|.+. ...+..++++++..+.............. . ....... .... .......+........
T Consensus 78 ~lA~E~A~~Le~~G~~v~~l~liD~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (229)
T PF00975_consen 78 ILAFEMARQLEEAGEEVSRLILIDSPPPSIKERPRSREPSDEQFIEELRRIGGTPDASLEDEELLARLLRALRDDFQALE 157 (229)
T ss_dssp HHHHHHHHHHHHTT-SESEEEEESCSSTTCHSCHHHHHCHHHHHHHHHHHHCHHHHHHCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhccCceEEecCCCCCcccchhhhhhhHHHHHHHHHHhcCCchhhhcCHHHHHHHHHHHHHHHHHHh
Confidence 9999999864 33589999999765432111000000000 0 0000000 0000 0111111110000000
Q ss_pred CChhhhhhhhheeeeEEEcCCCccCCHH---HHHHHHHHhcCCceEEEecCCCcceeec-chHhHHHHHHHHH
Q 024228 191 TLPAFVYKHILEKIHLLWGENDKIFDMQ---VARNLKEQVGQNATMESIEKAGHLVNLE-RPFVYNRQLKTIL 259 (270)
Q Consensus 191 ~~~~~~~~~~~~P~l~i~g~~D~~~~~~---~~~~~~~~~~~~~~~~~~~~~gH~~~~~-~~~~~~~~i~~fl 259 (270)
...........+|.++.....|+..... ....+.+......+++.++| +|+.++. +..++++.|.++|
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~v~G-~H~~~l~~~~~~i~~~I~~~~ 229 (229)
T PF00975_consen 158 NYSIRPIDKQKVPITLFYALDDPLVSMDRLEEADRWWDYTSGDVEVHDVPG-DHFSMLKPHVAEIAEKIAEWL 229 (229)
T ss_dssp TCS-TTSSSESSEEEEEEECSSSSSSHHCGGHHCHHHGCBSSSEEEEEESS-ETTGHHSTTHHHHHHHHHHHH
T ss_pred hccCCccccCCCcEEEEecCCCccccchhhhhHHHHHHhcCCCcEEEEEcC-CCcEecchHHHHHHHHHhccC
Confidence 0000000000257888889999887765 34446666655678899985 9999887 6677888888875
No 87
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.75 E-value=2.7e-16 Score=107.42 Aligned_cols=170 Identities=18% Similarity=0.206 Sum_probs=119.2
Q ss_pred CCCCceEEEeCCCC---Cccc-ccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCC-CChHHHHHHHHHHHHHh---CCC
Q 024228 42 TTKKHAVVLLHPFG---FDGI-LTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPD-RTASFQAECMAKGLRKL---GVE 112 (270)
Q Consensus 42 ~~~~~~vv~~hG~~---~~~~-~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~-~~~~~~~~~~~~~l~~~---~~~ 112 (270)
.+..|..|++|.-+ ++.. .....++..|.+. |.++.+|+||-|+|.+.... ... .+|..+.++.+ ...
T Consensus 25 ~~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~GiGE---~~Da~aaldW~~~~hp~ 101 (210)
T COG2945 25 TPAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDNGIGE---LEDAAAALDWLQARHPD 101 (210)
T ss_pred CCCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcccCCcch---HHHHHHHHHHHHhhCCC
Confidence 45678888888533 2222 2455667888888 99999999999999976533 222 34444444444 222
Q ss_pred --ceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccHHHHHHHHHhhhhcCC
Q 024228 113 --KCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLP 190 (270)
Q Consensus 113 --~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (270)
.+.|.|+|+|+++++.+|.+.|+ ....+.+.|...... .
T Consensus 102 s~~~~l~GfSFGa~Ia~~la~r~~e-~~~~is~~p~~~~~d--------------------------------f------ 142 (210)
T COG2945 102 SASCWLAGFSFGAYIAMQLAMRRPE-ILVFISILPPINAYD--------------------------------F------ 142 (210)
T ss_pred chhhhhcccchHHHHHHHHHHhccc-ccceeeccCCCCchh--------------------------------h------
Confidence 24689999999999999999986 666666655443100 0
Q ss_pred CChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHH
Q 024228 191 TLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILA 260 (270)
Q Consensus 191 ~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 260 (270)
..+....+|.++|+|+.|.+++.....++++.. ..+++++++++|+++. +-..+.+.|.+||.
T Consensus 143 ----s~l~P~P~~~lvi~g~~Ddvv~l~~~l~~~~~~--~~~~i~i~~a~HFF~g-Kl~~l~~~i~~~l~ 205 (210)
T COG2945 143 ----SFLAPCPSPGLVIQGDADDVVDLVAVLKWQESI--KITVITIPGADHFFHG-KLIELRDTIADFLE 205 (210)
T ss_pred ----hhccCCCCCceeEecChhhhhcHHHHHHhhcCC--CCceEEecCCCceecc-cHHHHHHHHHHHhh
Confidence 001111278999999999999988888887773 6789999999999864 55668899999985
No 88
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.75 E-value=2.9e-16 Score=118.64 Aligned_cols=232 Identities=18% Similarity=0.148 Sum_probs=148.7
Q ss_pred CCeEEEEEecCCC--CCCceEEEeCCCCCccc--c--------cHHHHH---HHhhcc-ceEEeecCCCCC-CCCCCC--
Q 024228 30 PGTILNIWVPKKT--TKKHAVVLLHPFGFDGI--L--------TWQFQV---LALAKT-YEVYVPDFLFFG-SSVTDR-- 90 (270)
Q Consensus 30 ~g~~l~~~~~~~~--~~~~~vv~~hG~~~~~~--~--------~~~~~~---~~l~~~-~~v~~~d~~g~G-~s~~~~-- 90 (270)
++..+.|...|.- ....+|+++|++.+++. . .|+.++ +.+.-. |-||++|..|.+ .|..+.
T Consensus 34 ~~~~vay~T~Gtln~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~ 113 (368)
T COG2021 34 SDARVAYETYGTLNAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSI 113 (368)
T ss_pred cCcEEEEEecccccccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCc
Confidence 3456778777753 33578999999998655 1 455554 335444 999999999876 333322
Q ss_pred -----------CCCChHHHHHHHHHHHHHhCCCceE-EEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhh--H
Q 024228 91 -----------PDRTASFQAECMAKGLRKLGVEKCT-LVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSN--A 156 (270)
Q Consensus 91 -----------~~~~~~~~~~~~~~~l~~~~~~~~~-l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~--~ 156 (270)
+..++.+++..-..++++++++++. ++|-||||+.++.++..+|++|.++|.+++.......... .
T Consensus 114 ~p~g~~yg~~FP~~ti~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s~~~ia~~~ 193 (368)
T COG2021 114 NPGGKPYGSDFPVITIRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLSAQNIAFNE 193 (368)
T ss_pred CCCCCccccCCCcccHHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChHHHhhhheecccccCCHHHHHHHH
Confidence 1256667777677888999999986 8999999999999999999999999999886554321100 0
Q ss_pred hhh----------------------------hcc------chhhhhhccc----------ccHHHHHHHHHhh-------
Q 024228 157 ALE----------------------------RIG------YESWVDFLLP----------KTADALKVQFDIA------- 185 (270)
Q Consensus 157 ~~~----------------------------~~~------~~~~~~~~~~----------~~~~~~~~~~~~~------- 185 (270)
..+ .+. ...+...+.. .........+...
T Consensus 194 ~~r~AI~~DP~~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~~~~~~~~~f~vESYL~~qg~kf~~r 273 (368)
T COG2021 194 VQRQAIEADPDWNGGDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQADPLRGGGVRFAVESYLDYQGDKFVAR 273 (368)
T ss_pred HHHHHHHhCCCccCCCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhcccccccccCCCchhHHHHHHHHHHHHHHHhc
Confidence 000 000 0000000000 0000011111000
Q ss_pred --------------hhcC---CCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEec-CCCcceeecc
Q 024228 186 --------------CYKL---PTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIE-KAGHLVNLER 247 (270)
Q Consensus 186 --------------~~~~---~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~-~~gH~~~~~~ 247 (270)
.+.. .......++.+..|++++.-+.|...|++..+.+.+.++....+++++ ..||..++..
T Consensus 274 fDaNsYL~lt~ald~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~~~~i~S~~GHDaFL~e 353 (368)
T COG2021 274 FDANSYLYLTRALDYHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPELQRALAEALPAAGALREIDSPYGHDAFLVE 353 (368)
T ss_pred cCcchHHHHHHHHHhcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHHHHHHHHhccccCceEEecCCCCchhhhcc
Confidence 0000 001112344455999999999999999999999999998333366664 4699999988
Q ss_pred hHhHHHHHHHHHHh
Q 024228 248 PFVYNRQLKTILAS 261 (270)
Q Consensus 248 ~~~~~~~i~~fl~~ 261 (270)
.+.+...|.+||+.
T Consensus 354 ~~~~~~~i~~fL~~ 367 (368)
T COG2021 354 SEAVGPLIRKFLAL 367 (368)
T ss_pred hhhhhHHHHHHhhc
Confidence 88899999999974
No 89
>COG0400 Predicted esterase [General function prediction only]
Probab=99.75 E-value=5.9e-17 Score=115.75 Aligned_cols=172 Identities=18% Similarity=0.209 Sum_probs=117.3
Q ss_pred CCCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCC--CCC----CCCCCCCCChHHH-------HHHHHHHHHH
Q 024228 42 TTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLF--FGS----SVTDRPDRTASFQ-------AECMAKGLRK 108 (270)
Q Consensus 42 ~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g--~G~----s~~~~~~~~~~~~-------~~~~~~~l~~ 108 (270)
.+..|+||++||.|++.. .+.++...+..++.++.+.-+= .|. +......++.+++ ++.+..+.+.
T Consensus 15 ~p~~~~iilLHG~Ggde~-~~~~~~~~~~P~~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~~ 93 (207)
T COG0400 15 DPAAPLLILLHGLGGDEL-DLVPLPELILPNATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAEE 93 (207)
T ss_pred CCCCcEEEEEecCCCChh-hhhhhhhhcCCCCeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHHHH
Confidence 355778999999999888 7777666666666666653210 010 0011112333332 3344444455
Q ss_pred hCC--CceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccHHHHHHHHHhhh
Q 024228 109 LGV--EKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIAC 186 (270)
Q Consensus 109 ~~~--~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (270)
.+. ++++++|+|.||.+++.+..++|+.+++++++++..........
T Consensus 94 ~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~~~~~------------------------------- 142 (207)
T COG0400 94 YGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEPELLP------------------------------- 142 (207)
T ss_pred hCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCCcccc-------------------------------
Confidence 554 78999999999999999999999999999999987764321000
Q ss_pred hcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc---CCceEEEecCCCcceeecchHhHHHHHHHHHHh
Q 024228 187 YKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG---QNATMESIEKAGHLVNLERPFVYNRQLKTILAS 261 (270)
Q Consensus 187 ~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 261 (270)
..-..|+++++|+.|+++|...+.++.+.+. .+++.+.++ .||....+ -.+.+.+|+.+
T Consensus 143 -----------~~~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~-~GH~i~~e----~~~~~~~wl~~ 204 (207)
T COG0400 143 -----------DLAGTPILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWHE-GGHEIPPE----ELEAARSWLAN 204 (207)
T ss_pred -----------ccCCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEec-CCCcCCHH----HHHHHHHHHHh
Confidence 0000799999999999999998888877765 467888888 79987543 34556667754
No 90
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.72 E-value=3.6e-15 Score=110.11 Aligned_cols=196 Identities=18% Similarity=0.126 Sum_probs=140.7
Q ss_pred eEEEeecCCeEEE-EE-ecCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCC-CCCCCCC-------C
Q 024228 23 QRTIEIEPGTILN-IW-VPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFF-GSSVTDR-------P 91 (270)
Q Consensus 23 ~~~i~~~~g~~l~-~~-~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~-G~s~~~~-------~ 91 (270)
...+..++ ..+. |. .+....+.|.||++|++.+-.. ..+..++.|++. |.++++|+-+. |.+.... .
T Consensus 4 ~v~~~~~~-~~~~~~~a~P~~~~~~P~VIv~hei~Gl~~-~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~ 81 (236)
T COG0412 4 DVTIPAPD-GELPAYLARPAGAGGFPGVIVLHEIFGLNP-HIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELET 81 (236)
T ss_pred ceEeeCCC-ceEeEEEecCCcCCCCCEEEEEecccCCch-HHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhh
Confidence 34555654 4443 33 3333334489999999999888 999999999999 99999998763 3222211 0
Q ss_pred ----CCChHHHHHHHHHHHHHhC------CCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhc
Q 024228 92 ----DRTASFQAECMAKGLRKLG------VEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERI 161 (270)
Q Consensus 92 ----~~~~~~~~~~~~~~l~~~~------~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~ 161 (270)
..+......|+.+.++.+. .+++.++|+||||.+++.++.+.| .+++.+...+.........
T Consensus 82 ~~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~~~~~~~------- 153 (236)
T COG0412 82 GLVERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLIADDTAD------- 153 (236)
T ss_pred hhhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCCCCcccc-------
Confidence 1223566778887777763 457999999999999999999987 6999888876554211100
Q ss_pred cchhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcC---CceEEEecC
Q 024228 162 GYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQ---NATMESIEK 238 (270)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~---~~~~~~~~~ 238 (270)
..+..+|+|+..|+.|..+|.+....+.+.+.. ..++.++++
T Consensus 154 -----------------------------------~~~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~g 198 (236)
T COG0412 154 -----------------------------------APKIKVPVLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIYPG 198 (236)
T ss_pred -----------------------------------cccccCcEEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEeCC
Confidence 112238999999999999999988888887762 478899999
Q ss_pred CCcceeecc-----------hHhHHHHHHHHHHhhh
Q 024228 239 AGHLVNLER-----------PFVYNRQLKTILASLV 263 (270)
Q Consensus 239 ~gH~~~~~~-----------~~~~~~~i~~fl~~~~ 263 (270)
+.|.++.+. .+.-++.+.+||++..
T Consensus 199 a~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~~ 234 (236)
T COG0412 199 AGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRLL 234 (236)
T ss_pred CccccccCCCcccccCCHHHHHHHHHHHHHHHHHhc
Confidence 989988432 2446677888888764
No 91
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.72 E-value=1.5e-16 Score=125.80 Aligned_cols=107 Identities=17% Similarity=0.169 Sum_probs=84.1
Q ss_pred CCCceEEEeCCCCCccc-ccHHH-HHHHhh--c-cceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHh------CC
Q 024228 43 TKKHAVVLLHPFGFDGI-LTWQF-QVLALA--K-TYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKL------GV 111 (270)
Q Consensus 43 ~~~~~vv~~hG~~~~~~-~~~~~-~~~~l~--~-~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~------~~ 111 (270)
.++|++|++||++++.. ..|.. +.+.|. + +++|+++|++|+|.+..+........+++++.++++.+ +.
T Consensus 39 ~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~~gl~l 118 (442)
T TIGR03230 39 HETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEEFNYPW 118 (442)
T ss_pred CCCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccccccHHHHHHHHHHHHHHHHHhhCCCC
Confidence 35799999999987542 25665 555553 2 39999999999998876544444566677777777765 36
Q ss_pred CceEEEEEchhHHHHHHHHhhCccccccEEEecccCCC
Q 024228 112 EKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGL 149 (270)
Q Consensus 112 ~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~ 149 (270)
++++|+||||||.+|..++.+.|++|.++++++|..+.
T Consensus 119 ~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP~ 156 (442)
T TIGR03230 119 DNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGPT 156 (442)
T ss_pred CcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCCc
Confidence 79999999999999999999999999999999997653
No 92
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.71 E-value=1e-15 Score=108.14 Aligned_cols=180 Identities=17% Similarity=0.159 Sum_probs=111.1
Q ss_pred EEEeCCCCCcccccHH--HHHHHhhcc---ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEEchh
Q 024228 48 VVLLHPFGFDGILTWQ--FQVLALAKT---YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVSYG 122 (270)
Q Consensus 48 vv~~hG~~~~~~~~~~--~~~~~l~~~---~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~G~S~G 122 (270)
|+++||+.++.. ... .+.+.+++. ..+.++|++ ...+...+.+.++++....+.+.|+|.|+|
T Consensus 2 ilYlHGF~Ssp~-S~Ka~~l~~~~~~~~~~~~~~~p~l~-----------~~p~~a~~~l~~~i~~~~~~~~~liGSSlG 69 (187)
T PF05728_consen 2 ILYLHGFNSSPQ-SFKAQALKQYFAEHGPDIQYPCPDLP-----------PFPEEAIAQLEQLIEELKPENVVLIGSSLG 69 (187)
T ss_pred eEEecCCCCCCC-CHHHHHHHHHHHHhCCCceEECCCCC-----------cCHHHHHHHHHHHHHhCCCCCeEEEEEChH
Confidence 799999999887 443 344556554 566777765 456777788889999888778999999999
Q ss_pred HHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhhe
Q 024228 123 GMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILE 202 (270)
Q Consensus 123 g~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (270)
|+.|..+|.+++ +++ |+++|...+........-..... ....... -......... ...... .....
T Consensus 70 G~~A~~La~~~~--~~a-vLiNPav~p~~~l~~~iG~~~~~-~~~e~~~-~~~~~~~~l~---~l~~~~------~~~~~ 135 (187)
T PF05728_consen 70 GFYATYLAERYG--LPA-VLINPAVRPYELLQDYIGEQTNP-YTGESYE-LTEEHIEELK---ALEVPY------PTNPE 135 (187)
T ss_pred HHHHHHHHHHhC--CCE-EEEcCCCCHHHHHHHhhCccccC-CCCccce-echHhhhhcc---eEeccc------cCCCc
Confidence 999999999885 555 88898876543332211110000 0000000 0000000000 000000 11116
Q ss_pred eeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHH
Q 024228 203 KIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTIL 259 (270)
Q Consensus 203 P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 259 (270)
+++++.++.|++++.+.+. +... ++..++.+|++|-+. +-++....|.+|+
T Consensus 136 ~~lvll~~~DEvLd~~~a~---~~~~-~~~~~i~~ggdH~f~--~f~~~l~~i~~f~ 186 (187)
T PF05728_consen 136 RYLVLLQTGDEVLDYREAV---AKYR-GCAQIIEEGGDHSFQ--DFEEYLPQIIAFL 186 (187)
T ss_pred cEEEEEecCCcccCHHHHH---HHhc-CceEEEEeCCCCCCc--cHHHHHHHHHHhh
Confidence 8999999999999985543 3343 455556678899874 4556667788776
No 93
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.70 E-value=9.7e-15 Score=114.41 Aligned_cols=215 Identities=15% Similarity=0.117 Sum_probs=140.6
Q ss_pred CceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEEchhHH
Q 024228 45 KHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVSYGGM 124 (270)
Q Consensus 45 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~ 124 (270)
.|+||++..+.+.....-+.+.+.|.+.+.|+..|+..-+..+......+++++++-+.+.+++++.+ +.++|+|+||.
T Consensus 102 ~~pvLiV~Pl~g~~~~L~RS~V~~Ll~g~dVYl~DW~~p~~vp~~~~~f~ldDYi~~l~~~i~~~G~~-v~l~GvCqgG~ 180 (406)
T TIGR01849 102 GPAVLIVAPMSGHYATLLRSTVEALLPDHDVYITDWVNARMVPLSAGKFDLEDYIDYLIEFIRFLGPD-IHVIAVCQPAV 180 (406)
T ss_pred CCcEEEEcCCchHHHHHHHHHHHHHhCCCcEEEEeCCCCCCCchhcCCCCHHHHHHHHHHHHHHhCCC-CcEEEEchhhH
Confidence 37999999988665523355677777789999999987765554556789999999999999999876 99999999999
Q ss_pred HHHHHHhhC-----ccccccEEEecccCCCCch--hhhHhh--------hhc------------c---chhhh--hhc--
Q 024228 125 VGFKMAEMY-----PDLVESMVVTCSVMGLTES--VSNAAL--------ERI------------G---YESWV--DFL-- 170 (270)
Q Consensus 125 ~a~~~a~~~-----p~~v~~~i~~~~~~~~~~~--~~~~~~--------~~~------------~---~~~~~--~~~-- 170 (270)
.++.+++.. |.+++.+++++++.++... ...... ... + ..... ..+
T Consensus 181 ~~laa~Al~a~~~~p~~~~sltlm~~PID~~~~p~~v~~~a~~~~i~~~~~~~i~~vp~~~~g~gr~v~PG~~~~~~F~~ 260 (406)
T TIGR01849 181 PVLAAVALMAENEPPAQPRSMTLMGGPIDARASPTVVNELAREKPIEWFQHNVIMRVPFPYPGAGRLVYPGFLQLAGFIS 260 (406)
T ss_pred HHHHHHHHHHhcCCCCCcceEEEEecCccCCCCCchHHHHhhcccHHHHHHHhhhccCccccCCCCcccCHHHHHHHHHH
Confidence 977666654 6679999999998776432 111110 000 0 00000 000
Q ss_pred -ccc-------------------cHHHHHHHHHhhhhcCCCChhh---------------------------hhhhhh-e
Q 024228 171 -LPK-------------------TADALKVQFDIACYKLPTLPAF---------------------------VYKHIL-E 202 (270)
Q Consensus 171 -~~~-------------------~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~-~ 202 (270)
.+. .......++.. .......+.+ .+.++. +
T Consensus 261 mnp~r~~~~~~~~~~~l~~gd~~~~~~~~~f~~~-y~d~~dlpge~y~~~v~~vf~~n~L~~G~l~v~G~~Vdl~~I~~~ 339 (406)
T TIGR01849 261 MNLDRHTKAHSDFFLHLVKGDGQEADKHRIFYDE-YLAVMDMTAEFYLQTIDVVFQQFLLPQGKFIVEGKRVDPGAITRV 339 (406)
T ss_pred cCcchHHHHHHHHHHHHhcCCcchHHHHHHHHHH-hhhccCCcHHHHHHHHHHHHHhCCccCCcEEECCEEecHHHCccc
Confidence 000 00000001110 0000111111 122222 8
Q ss_pred eeeEEEcCCCccCCHHHHHHHHHHh---c-CCceEEEecCCCcceeec---chHhHHHHHHHHHHh
Q 024228 203 KIHLLWGENDKIFDMQVARNLKEQV---G-QNATMESIEKAGHLVNLE---RPFVYNRQLKTILAS 261 (270)
Q Consensus 203 P~l~i~g~~D~~~~~~~~~~~~~~~---~-~~~~~~~~~~~gH~~~~~---~~~~~~~~i~~fl~~ 261 (270)
|+|.+.|++|.++|++.+..+.+.+ + .+.+.++.+++||...+. -.+++...|.+||.+
T Consensus 340 pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~~~i~P~i~~wl~~ 405 (406)
T TIGR01849 340 ALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRFREEIYPLVREFIRR 405 (406)
T ss_pred ceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChhhhhhhchHHHHHHHh
Confidence 9999999999999999999988875 4 345677787899999873 357789999999975
No 94
>PRK10115 protease 2; Provisional
Probab=99.69 E-value=4.5e-15 Score=125.77 Aligned_cols=216 Identities=12% Similarity=0.063 Sum_probs=134.3
Q ss_pred CceeEEEeecCCeEEEEE-ecCC----CCCCceEEEeCCCCCccc-ccHHHHHHHhhcc-ceEEeecCCCCCCCCCC---
Q 024228 20 GMTQRTIEIEPGTILNIW-VPKK----TTKKHAVVLLHPFGFDGI-LTWQFQVLALAKT-YEVYVPDFLFFGSSVTD--- 89 (270)
Q Consensus 20 ~~~~~~i~~~~g~~l~~~-~~~~----~~~~~~vv~~hG~~~~~~-~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~--- 89 (270)
..+..+++..||.++.++ ...+ ..+.|.||++||..+... ..|......|.++ |.|+.++.||.|.-...
T Consensus 415 ~~e~v~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~~ 494 (686)
T PRK10115 415 RSEHLWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYE 494 (686)
T ss_pred EEEEEEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHHHH
Confidence 345666777799998763 2211 234699999999887664 3566656666666 99999999997644321
Q ss_pred -----CCCCChHHHHHHHHHHHHH--hCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhcc
Q 024228 90 -----RPDRTASFQAECMAKGLRK--LGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIG 162 (270)
Q Consensus 90 -----~~~~~~~~~~~~~~~~l~~--~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~ 162 (270)
....+++++++.+..+++. .+.+++.+.|.|.||+++..++.++|++++++|...|..+....+..... ...
T Consensus 495 ~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D~~~~~~~~~~-p~~ 573 (686)
T PRK10115 495 DGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDVVTTMLDESI-PLT 573 (686)
T ss_pred hhhhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchhHhhhcccCCC-CCC
Confidence 1224455555555444443 13568999999999999999999999999999999888764322110000 000
Q ss_pred chhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhhee-eeEEEcCCCccCCHHHHHHHHHHhc---CCceEEEe--
Q 024228 163 YESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEK-IHLLWGENDKIFDMQVARNLKEQVG---QNATMESI-- 236 (270)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~-- 236 (270)
......+-.+........+.... |-..+.+...| +|+++|.+|.-||+..+.++...+. ...+++++
T Consensus 574 ~~~~~e~G~p~~~~~~~~l~~~S-------P~~~v~~~~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~~~~~~~vl~~~ 646 (686)
T PRK10115 574 TGEFEEWGNPQDPQYYEYMKSYS-------PYDNVTAQAYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDDHLLLLCT 646 (686)
T ss_pred hhHHHHhCCCCCHHHHHHHHHcC-------chhccCccCCCceeEEecCCCCCcCchHHHHHHHHHHhcCCCCceEEEEe
Confidence 00111111122111111111111 11122333467 6677999999999999998888875 24567777
Q ss_pred -cCCCcce
Q 024228 237 -EKAGHLV 243 (270)
Q Consensus 237 -~~~gH~~ 243 (270)
+++||..
T Consensus 647 ~~~~GHg~ 654 (686)
T PRK10115 647 DMDSGHGG 654 (686)
T ss_pred cCCCCCCC
Confidence 8999984
No 95
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.69 E-value=3.2e-14 Score=101.02 Aligned_cols=221 Identities=15% Similarity=0.185 Sum_probs=120.7
Q ss_pred eEEEeecCCeEEEEEecCCC----CCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCC-CCCCCCCCCCChH
Q 024228 23 QRTIEIEPGTILNIWVPKKT----TKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFF-GSSVTDRPDRTAS 96 (270)
Q Consensus 23 ~~~i~~~~g~~l~~~~~~~~----~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~-G~s~~~~~~~~~~ 96 (270)
.+.+.+.+|..+++|...+. ...++||+.+|++-..+ .|..++.+|+.+ |+|+.+|.-.| |.|++....+++.
T Consensus 4 dhvi~~~~~~~I~vwet~P~~~~~~~~~tiliA~Gf~rrmd-h~agLA~YL~~NGFhViRyDsl~HvGlSsG~I~eftms 82 (294)
T PF02273_consen 4 DHVIRLEDGRQIRVWETRPKNNEPKRNNTILIAPGFARRMD-HFAGLAEYLSANGFHVIRYDSLNHVGLSSGDINEFTMS 82 (294)
T ss_dssp EEEEEETTTEEEEEEEE---TTS---S-EEEEE-TT-GGGG-GGHHHHHHHHTTT--EEEE---B-------------HH
T ss_pred cceeEcCCCCEEEEeccCCCCCCcccCCeEEEecchhHHHH-HHHHHHHHHhhCCeEEEeccccccccCCCCChhhcchH
Confidence 46678889999999976653 24589999999999999 999999999999 99999999877 9999888889998
Q ss_pred HHHHHHHHHHHHh---CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhc---cchhhhhhc
Q 024228 97 FQAECMAKGLRKL---GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERI---GYESWVDFL 170 (270)
Q Consensus 97 ~~~~~~~~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 170 (270)
...+++..+++.+ +..++.|+.-|..|.+|+..|.+- .+.-+|..-+...............+ .........
T Consensus 83 ~g~~sL~~V~dwl~~~g~~~~GLIAaSLSaRIAy~Va~~i--~lsfLitaVGVVnlr~TLe~al~~Dyl~~~i~~lp~dl 160 (294)
T PF02273_consen 83 IGKASLLTVIDWLATRGIRRIGLIAASLSARIAYEVAADI--NLSFLITAVGVVNLRDTLEKALGYDYLQLPIEQLPEDL 160 (294)
T ss_dssp HHHHHHHHHHHHHHHTT---EEEEEETTHHHHHHHHTTTS----SEEEEES--S-HHHHHHHHHSS-GGGS-GGG--SEE
T ss_pred HhHHHHHHHHHHHHhcCCCcchhhhhhhhHHHHHHHhhcc--CcceEEEEeeeeeHHHHHHHHhccchhhcchhhCCCcc
Confidence 8888888777765 677899999999999999999854 37777776655543322111110000 000000000
Q ss_pred --ccccHHHHHHHHHhhhhcCCCCh----hhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc-CCceEEEecCCCcce
Q 024228 171 --LPKTADALKVQFDIACYKLPTLP----AFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG-QNATMESIEKAGHLV 243 (270)
Q Consensus 171 --~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~ 243 (270)
..... .... +........|.. ....+.+.+|++.+++++|.+|......++...+. ..++++.++|++|..
T Consensus 161 dfeGh~l-~~~v-Fv~dc~e~~w~~l~ST~~~~k~l~iP~iaF~A~~D~WV~q~eV~~~~~~~~s~~~klysl~Gs~HdL 238 (294)
T PF02273_consen 161 DFEGHNL-GAEV-FVTDCFEHGWDDLDSTINDMKRLSIPFIAFTANDDDWVKQSEVEELLDNINSNKCKLYSLPGSSHDL 238 (294)
T ss_dssp EETTEEE-EHHH-HHHHHHHTT-SSHHHHHHHHTT--S-EEEEEETT-TTS-HHHHHHHHTT-TT--EEEEEETT-SS-T
T ss_pred ccccccc-chHH-HHHHHHHcCCccchhHHHHHhhCCCCEEEEEeCCCccccHHHHHHHHHhcCCCceeEEEecCccchh
Confidence 00000 0111 222222333332 22344455999999999999999998888887765 457899999999987
Q ss_pred eecchH
Q 024228 244 NLERPF 249 (270)
Q Consensus 244 ~~~~~~ 249 (270)
-|++.
T Consensus 239 -~enl~ 243 (294)
T PF02273_consen 239 -GENLV 243 (294)
T ss_dssp -TSSHH
T ss_pred -hhChH
Confidence 35543
No 96
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.68 E-value=2.2e-16 Score=119.63 Aligned_cols=117 Identities=17% Similarity=0.102 Sum_probs=82.8
Q ss_pred CeEEEEEecCCCCCCceEEEeCCCCCcccccHHH-HHH-Hhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHH
Q 024228 31 GTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQF-QVL-ALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLR 107 (270)
Q Consensus 31 g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~-~~~-~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~ 107 (270)
+..+.+.... +++|++|++||++++....|.. +.. .+.+. ++|+++|+++++.+.......+...+.+++..+++
T Consensus 24 ~~~~~~~~f~--~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~a~~~~~~v~~~la~~l~ 101 (275)
T cd00707 24 PSSLKNSNFN--PSRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQAVNNTRVVGAELAKFLD 101 (275)
T ss_pred hhhhhhcCCC--CCCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHHHHHhHHHHHHHHHHHHH
Confidence 4444443333 3579999999999987326654 444 34444 99999999987433322222344455566666665
Q ss_pred Hh------CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCC
Q 024228 108 KL------GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGL 149 (270)
Q Consensus 108 ~~------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~ 149 (270)
.+ +.++++++|||+||.+|..++.+.|++|+++++++|..+.
T Consensus 102 ~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p~ 149 (275)
T cd00707 102 FLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGPL 149 (275)
T ss_pred HHHHhcCCChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCccc
Confidence 54 3468999999999999999999999999999999987654
No 97
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.68 E-value=4.1e-15 Score=107.07 Aligned_cols=232 Identities=19% Similarity=0.164 Sum_probs=145.2
Q ss_pred CCceeEEEeec--CCeEEEEEe--cCCC-CCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCC---
Q 024228 19 VGMTQRTIEIE--PGTILNIWV--PKKT-TKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDR--- 90 (270)
Q Consensus 19 ~~~~~~~i~~~--~g~~l~~~~--~~~~-~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~--- 90 (270)
..++.-.++.+ +|.+|.-|. +... ...|.||-.||+++..+ .|..+...-...|.|+.+|.||.|.|....
T Consensus 52 ~~ve~ydvTf~g~~g~rI~gwlvlP~~~~~~~P~vV~fhGY~g~~g-~~~~~l~wa~~Gyavf~MdvRGQg~~~~dt~~~ 130 (321)
T COG3458 52 PRVEVYDVTFTGYGGARIKGWLVLPRHEKGKLPAVVQFHGYGGRGG-EWHDMLHWAVAGYAVFVMDVRGQGSSSQDTADP 130 (321)
T ss_pred CceEEEEEEEeccCCceEEEEEEeecccCCccceEEEEeeccCCCC-CccccccccccceeEEEEecccCCCccccCCCC
Confidence 34444444433 788887553 4433 45689999999999998 887777666666999999999999874311
Q ss_pred -CC-----------------CChHHHHHHHHHHHHH------hCCCceEEEEEchhHHHHHHHHhhCccccccEEEeccc
Q 024228 91 -PD-----------------RTASFQAECMAKGLRK------LGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSV 146 (270)
Q Consensus 91 -~~-----------------~~~~~~~~~~~~~l~~------~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~ 146 (270)
.. +.......|+..+++. .+.+++.+.|.|.||.+++.+++..| +|++++.+-|.
T Consensus 131 p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik~~~~~~Pf 209 (321)
T COG3458 131 PGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIKAVVADYPF 209 (321)
T ss_pred CCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhhcccccccc
Confidence 10 0111123444444443 35679999999999999999988876 69999988877
Q ss_pred CCCCchhhhHhhhhccchhh---hhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHH
Q 024228 147 MGLTESVSNAALERIGYESW---VDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNL 223 (270)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~ 223 (270)
..--........ .-....+ .+...+.....+.. +. . .........+.+|+|+..|-.|+++|+...-..
T Consensus 210 l~df~r~i~~~~-~~~ydei~~y~k~h~~~e~~v~~T-L~--y----fD~~n~A~RiK~pvL~svgL~D~vcpPstqFA~ 281 (321)
T COG3458 210 LSDFPRAIELAT-EGPYDEIQTYFKRHDPKEAEVFET-LS--Y----FDIVNLAARIKVPVLMSVGLMDPVCPPSTQFAA 281 (321)
T ss_pred cccchhheeecc-cCcHHHHHHHHHhcCchHHHHHHH-Hh--h----hhhhhHHHhhccceEEeecccCCCCCChhhHHH
Confidence 542221111100 0000011 11111111111111 11 0 112233455569999999999999999999999
Q ss_pred HHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHHhhh
Q 024228 224 KEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILASLV 263 (270)
Q Consensus 224 ~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 263 (270)
++++...+++.+++.-+|... |.-..+.+..|++...
T Consensus 282 yN~l~~~K~i~iy~~~aHe~~---p~~~~~~~~~~l~~l~ 318 (321)
T COG3458 282 YNALTTSKTIEIYPYFAHEGG---PGFQSRQQVHFLKILF 318 (321)
T ss_pred hhcccCCceEEEeeccccccC---cchhHHHHHHHHHhhc
Confidence 999987788888887777543 4444566777776543
No 98
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.66 E-value=1.2e-14 Score=102.19 Aligned_cols=232 Identities=17% Similarity=0.088 Sum_probs=142.0
Q ss_pred EEEeecCCeEEEEEecCCCCCCc-eEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCC---CChHHH
Q 024228 24 RTIEIEPGTILNIWVPKKTTKKH-AVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPD---RTASFQ 98 (270)
Q Consensus 24 ~~i~~~~g~~l~~~~~~~~~~~~-~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~---~~~~~~ 98 (270)
..+...||..+........+..+ .+++-.+.+.... .|++++..+++. |.|+++|+||.|.|...... ....++
T Consensus 8 ~~l~~~DG~~l~~~~~pA~~~~~g~~~va~a~Gv~~~-fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~Dw 86 (281)
T COG4757 8 AHLPAPDGYSLPGQRFPADGKASGRLVVAGATGVGQY-FYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLDW 86 (281)
T ss_pred cccccCCCccCccccccCCCCCCCcEEecccCCcchh-HhHHHHHHhhccCceEEEEecccccCCCccccccCccchhhh
Confidence 44666799988766555434444 4444445555555 889999999988 99999999999999876543 445555
Q ss_pred H-HHHHHHHHHhC----CCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHh-hhhcc--------ch
Q 024228 99 A-ECMAKGLRKLG----VEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAA-LERIG--------YE 164 (270)
Q Consensus 99 ~-~~~~~~l~~~~----~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~-~~~~~--------~~ 164 (270)
+ .|+.+.++.++ .-+..++|||+||.+...+.. ++ +..+....+........+.... ..... ..
T Consensus 87 A~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~gL~~~-~~-k~~a~~vfG~gagwsg~m~~~~~l~~~~l~~lv~p~lt 164 (281)
T COG4757 87 ARLDFPAALAALKKALPGHPLYFVGHSFGGQALGLLGQ-HP-KYAAFAVFGSGAGWSGWMGLRERLGAVLLWNLVGPPLT 164 (281)
T ss_pred hhcchHHHHHHHHhhCCCCceEEeeccccceeeccccc-Cc-ccceeeEeccccccccchhhhhcccceeeccccccchh
Confidence 3 36666666553 348999999999988765544 34 5666666555544433222110 00000 00
Q ss_pred hhh----hhc--cc--ccHHHHHHHHHhhhhcCCCC-------hhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcC
Q 024228 165 SWV----DFL--LP--KTADALKVQFDIACYKLPTL-------PAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQ 229 (270)
Q Consensus 165 ~~~----~~~--~~--~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~ 229 (270)
.+. ..+ .. .....++++..........+ ..+..+...+|+.++...+|+.+|+...+.+.+..+
T Consensus 165 ~w~g~~p~~l~G~G~d~p~~v~RdW~RwcR~p~y~fddp~~~~~~q~yaaVrtPi~~~~~~DD~w~P~As~d~f~~~y~- 243 (281)
T COG4757 165 FWKGYMPKDLLGLGSDLPGTVMRDWARWCRHPRYYFDDPAMRNYRQVYAAVRTPITFSRALDDPWAPPASRDAFASFYR- 243 (281)
T ss_pred hccccCcHhhcCCCccCcchHHHHHHHHhcCccccccChhHhHHHHHHHHhcCceeeeccCCCCcCCHHHHHHHHHhhh-
Confidence 000 000 01 11112223322222221111 233455556999999999999999999999988877
Q ss_pred Cc--eEEEecC----CCcceeecch-HhHHHHHHHHH
Q 024228 230 NA--TMESIEK----AGHLVNLERP-FVYNRQLKTIL 259 (270)
Q Consensus 230 ~~--~~~~~~~----~gH~~~~~~~-~~~~~~i~~fl 259 (270)
++ +...++. -||+-...++ |.+.+.+.+|+
T Consensus 244 nApl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w~ 280 (281)
T COG4757 244 NAPLEMRDLPRAEGPLGHMGYFREPFEALWKEMLGWF 280 (281)
T ss_pred cCcccceecCcccCcccchhhhccchHHHHHHHHHhh
Confidence 44 4455544 4999988777 77888888776
No 99
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.65 E-value=5.9e-15 Score=123.04 Aligned_cols=121 Identities=18% Similarity=0.116 Sum_probs=90.8
Q ss_pred eecCCeEEEEE--ecCCCCCCceEEEeCCCCCccc--ccH-HHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHH
Q 024228 27 EIEPGTILNIW--VPKKTTKKHAVVLLHPFGFDGI--LTW-QFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAE 100 (270)
Q Consensus 27 ~~~~g~~l~~~--~~~~~~~~~~vv~~hG~~~~~~--~~~-~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~ 100 (270)
+..||.+|++. .+...++.|+||++||++.+.. ..+ ......|.++ |.|+++|+||+|.|.......+ ...++
T Consensus 2 ~~~DG~~L~~~~~~P~~~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~~~-~~~~~ 80 (550)
T TIGR00976 2 PMRDGTRLAIDVYRPAGGGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDLLG-SDEAA 80 (550)
T ss_pred cCCCCCEEEEEEEecCCCCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceEecC-cccch
Confidence 45689888754 3333345789999999987642 012 1234566666 9999999999999987644333 45677
Q ss_pred HHHHHHHHhC-----CCceEEEEEchhHHHHHHHHhhCccccccEEEecccCC
Q 024228 101 CMAKGLRKLG-----VEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMG 148 (270)
Q Consensus 101 ~~~~~l~~~~-----~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~ 148 (270)
|+.++++.+. ..+++++|+|+||.+++.+|..+|++++++|..++...
T Consensus 81 D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d 133 (550)
T TIGR00976 81 DGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWD 133 (550)
T ss_pred HHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccc
Confidence 8888877763 24899999999999999999999999999999887654
No 100
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.61 E-value=1.3e-14 Score=106.74 Aligned_cols=186 Identities=17% Similarity=0.138 Sum_probs=99.9
Q ss_pred EEEeCCCCCccc--ccHHHHHHHhhc-c-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHH----H-----hCCCce
Q 024228 48 VVLLHPFGFDGI--LTWQFQVLALAK-T-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLR----K-----LGVEKC 114 (270)
Q Consensus 48 vv~~hG~~~~~~--~~~~~~~~~l~~-~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~----~-----~~~~~~ 114 (270)
||++||++.... .....++..+++ . +.|+.+|||-.. ........+|+.+.++ . .+.+++
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p-------~~~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i 73 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAP-------EAPFPAALEDVKAAYRWLLKNADKLGIDPERI 73 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TT-------TSSTTHHHHHHHHHHHHHHHTHHHHTEEEEEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeeccccc-------cccccccccccccceeeeccccccccccccce
Confidence 789999875433 144556666665 4 999999999432 2233444555544443 3 345689
Q ss_pred EEEEEchhHHHHHHHHhhCcc----ccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccHHHHHHHHHhhhhcC-
Q 024228 115 TLVGVSYGGMVGFKMAEMYPD----LVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKL- 189 (270)
Q Consensus 115 ~l~G~S~Gg~~a~~~a~~~p~----~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 189 (270)
+|+|+|.||.+++.++....+ .++++++++|.................... ...+.......+...+.......
T Consensus 74 ~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 152 (211)
T PF07859_consen 74 VLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDLQDFDGPSYDDSNENKD-DPFLPAPKIDWFWKLYLPGSDRDD 152 (211)
T ss_dssp EEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSSTSTSSCHHHHHHHHHST-TSSSBHHHHHHHHHHHHSTGGTTS
T ss_pred EEeecccccchhhhhhhhhhhhcccchhhhhcccccccchhcccccccccccccc-cccccccccccccccccccccccc
Confidence 999999999999999876433 489999999976541110011100000000 00001111111111111111111
Q ss_pred CCC-hhh--hhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc---CCceEEEecCCCccee
Q 024228 190 PTL-PAF--VYKHILEKIHLLWGENDKIFDMQVARNLKEQVG---QNATMESIEKAGHLVN 244 (270)
Q Consensus 190 ~~~-~~~--~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~~ 244 (270)
... +.. .... ..|+++++|+.|.+++ ....+.+.+. .+++++++++.+|.+.
T Consensus 153 ~~~sp~~~~~~~~-~Pp~~i~~g~~D~l~~--~~~~~~~~L~~~gv~v~~~~~~g~~H~f~ 210 (211)
T PF07859_consen 153 PLASPLNASDLKG-LPPTLIIHGEDDVLVD--DSLRFAEKLKKAGVDVELHVYPGMPHGFF 210 (211)
T ss_dssp TTTSGGGSSCCTT-CHEEEEEEETTSTTHH--HHHHHHHHHHHTT-EEEEEEETTEETTGG
T ss_pred ccccccccccccc-CCCeeeeccccccchH--HHHHHHHHHHHCCCCEEEEEECCCeEEee
Confidence 111 110 1111 3799999999998864 5556666654 3578999999999764
No 101
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=99.61 E-value=9.6e-14 Score=108.65 Aligned_cols=242 Identities=19% Similarity=0.207 Sum_probs=153.6
Q ss_pred CceeEEEeecCCeEEEEEe-cCCCCCCceEEEeCCCCCcccccHHH------HHHHhhcc-ceEEeecCCCCCCCCCCC-
Q 024228 20 GMTQRTIEIEPGTILNIWV-PKKTTKKHAVVLLHPFGFDGILTWQF------QVLALAKT-YEVYVPDFLFFGSSVTDR- 90 (270)
Q Consensus 20 ~~~~~~i~~~~g~~l~~~~-~~~~~~~~~vv~~hG~~~~~~~~~~~------~~~~l~~~-~~v~~~d~~g~G~s~~~~- 90 (270)
..+.+.|++.||..+.... +....++|+|++.||+..++. .|-. ++=.|++. |.|+.-+.||.-.|....
T Consensus 47 ~~E~h~V~T~DgYiL~lhRIp~~~~~rp~Vll~HGLl~sS~-~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h~~ 125 (403)
T KOG2624|consen 47 PVEEHEVTTEDGYILTLHRIPRGKKKRPVVLLQHGLLASSS-SWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRKHKK 125 (403)
T ss_pred ceEEEEEEccCCeEEEEeeecCCCCCCCcEEEeeccccccc-cceecCccccHHHHHHHcCCceeeecCcCcccchhhcc
Confidence 4789999999999776633 333367899999999999988 7753 34456777 999999999976664321
Q ss_pred ---------CCCChHHHH-HHHHHHHHHh----CCCceEEEEEchhHHHHHHHHhhCcc---ccccEEEecccCCCCc--
Q 024228 91 ---------PDRTASFQA-ECMAKGLRKL----GVEKCTLVGVSYGGMVGFKMAEMYPD---LVESMVVTCSVMGLTE-- 151 (270)
Q Consensus 91 ---------~~~~~~~~~-~~~~~~l~~~----~~~~~~l~G~S~Gg~~a~~~a~~~p~---~v~~~i~~~~~~~~~~-- 151 (270)
-++++++++ .|+-+.|+.+ +.++++.+|||.|+.....++...|+ +|+.+++++|......
T Consensus 126 l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~~~k~~~ 205 (403)
T KOG2624|consen 126 LSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAAFPKHIK 205 (403)
T ss_pred cCCcCCcceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecchhhhcccc
Confidence 125555543 3666666554 67899999999999999998888875 7999999999874330
Q ss_pred hhhhHhhhhc-----------cc----------hhhhhhccc--------------------------------------
Q 024228 152 SVSNAALERI-----------GY----------ESWVDFLLP-------------------------------------- 172 (270)
Q Consensus 152 ~~~~~~~~~~-----------~~----------~~~~~~~~~-------------------------------------- 172 (270)
.......... +. .........
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~fg~~~f~p~~~~~~~~~~~~C~~~~~~~~lC~~~~~~~~G~~~~~~n~~~~~~~~~h~pa 285 (403)
T KOG2624|consen 206 SLLNKFLDPFLGAFSLLPLLFGRKEFLPSNLFIKKFARKICSGSKIFADLCSNFLFLLVGWNSNNWNTTLLPVYLAHLPA 285 (403)
T ss_pred cHHHHhhhhhhhhhhHHHHhcCCccccchhhHHHHHHHHHhcchhHHHHHHHHHHHHHcCcchHhhhhcccchhhccCCC
Confidence 1100000000 00 000000000
Q ss_pred -ccHHHHH---HHHHhh--------------hhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEE
Q 024228 173 -KTADALK---VQFDIA--------------CYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATME 234 (270)
Q Consensus 173 -~~~~~~~---~~~~~~--------------~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~ 234 (270)
.+...+. +..... .+.....|...+..+.+|+.+.+|++|.++.++..+.+...++ +....
T Consensus 286 gtSvk~~~H~~Q~~~s~~f~~yD~G~~~N~~~Y~q~~pP~Y~l~~i~~P~~l~~g~~D~l~~~~DV~~~~~~~~-~~~~~ 364 (403)
T KOG2624|consen 286 GTSVKNIVHWAQIVRSGKFRKYDYGSKRNLKHYGQSTPPEYDLTNIKVPTALYYGDNDWLADPEDVLILLLVLP-NSVIK 364 (403)
T ss_pred CccHHHHHHHHHHhcCCCccccCCCccccHhhcCCCCCCCCCccccccCEEEEecCCcccCCHHHHHHHHHhcc-ccccc
Confidence 0000000 000000 0011111222223333899999999999999999998888877 33322
Q ss_pred ---EecCCCcceee---cchHhHHHHHHHHHHhhh
Q 024228 235 ---SIEKAGHLVNL---ERPFVYNRQLKTILASLV 263 (270)
Q Consensus 235 ---~~~~~gH~~~~---~~~~~~~~~i~~fl~~~~ 263 (270)
.+++-.|..++ +.++++.+.|.+.++...
T Consensus 365 ~~~~~~~ynHlDFi~g~da~~~vy~~vi~~~~~~~ 399 (403)
T KOG2624|consen 365 YIVPIPEYNHLDFIWGLDAKEEVYDPVIERLRLFE 399 (403)
T ss_pred ccccCCCccceeeeeccCcHHHHHHHHHHHHHhhh
Confidence 26888998876 568889999998887654
No 102
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.60 E-value=1.6e-13 Score=110.93 Aligned_cols=207 Identities=14% Similarity=0.135 Sum_probs=131.1
Q ss_pred CCeEEEEEecCC-CCCCceEEEeCCCCCcccccH-----HHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHH
Q 024228 30 PGTILNIWVPKK-TTKKHAVVLLHPFGFDGILTW-----QFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECM 102 (270)
Q Consensus 30 ~g~~l~~~~~~~-~~~~~~vv~~hG~~~~~~~~~-----~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~ 102 (270)
+-.++..|.+.. ..-+++||+++.+-.... .+ +.++++|.++ +.|+.+|+++-+... ...+++++++.+
T Consensus 199 ~l~eLiqY~P~te~v~~~PLLIVPp~INK~Y-IlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~---r~~~ldDYv~~i 274 (560)
T TIGR01839 199 EVLELIQYKPITEQQHARPLLVVPPQINKFY-IFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAH---REWGLSTYVDAL 274 (560)
T ss_pred CceEEEEeCCCCCCcCCCcEEEechhhhhhh-eeecCCcchHHHHHHHcCCeEEEEeCCCCChhh---cCCCHHHHHHHH
Confidence 334554444432 234689999999885544 45 4678888888 999999999765543 446778888777
Q ss_pred HHHHHHh----CCCceEEEEEchhHHHHHH----HHhhCcc-ccccEEEecccCCCCchh-hh------------Hhhhh
Q 024228 103 AKGLRKL----GVEKCTLVGVSYGGMVGFK----MAEMYPD-LVESMVVTCSVMGLTESV-SN------------AALER 160 (270)
Q Consensus 103 ~~~l~~~----~~~~~~l~G~S~Gg~~a~~----~a~~~p~-~v~~~i~~~~~~~~~~~~-~~------------~~~~~ 160 (270)
.+.++.+ +.+++.++|+|+||.+++. +++++++ +|++++++.+..++.... .. .....
T Consensus 275 ~~Ald~V~~~tG~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~~~g~l~~f~~e~~~~~~e~~~~~ 354 (560)
T TIGR01839 275 KEAVDAVRAITGSRDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDSTMESPAALFADEQTLEAAKRRSYQ 354 (560)
T ss_pred HHHHHHHHHhcCCCCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccCCCCcchhccChHHHHHHHHHHHh
Confidence 7777665 5678999999999999987 7888885 799999998877654211 00 00000
Q ss_pred ccc------hhhhhhccccc-------------------------------H-HHHHHHHHhhhhcCCCC----------
Q 024228 161 IGY------ESWVDFLLPKT-------------------------------A-DALKVQFDIACYKLPTL---------- 192 (270)
Q Consensus 161 ~~~------~~~~~~~~~~~-------------------------------~-~~~~~~~~~~~~~~~~~---------- 192 (270)
.+. ......+.+.. . ....+++. .+.....
T Consensus 355 ~G~lpg~~ma~~F~~LrP~dliw~y~v~~yllg~~p~~fdll~Wn~D~t~lPg~~~~e~l~--ly~~N~L~~pG~l~v~G 432 (560)
T TIGR01839 355 AGVLDGSEMAKVFAWMRPNDLIWNYWVNNYLLGNEPPAFDILYWNNDTTRLPAAFHGDLLD--MFKSNPLTRPDALEVCG 432 (560)
T ss_pred cCCcCHHHHHHHHHhcCchhhhHHHHHHHhhcCCCcchhhHHHHhCcCccchHHHHHHHHH--HHhcCCCCCCCCEEECC
Confidence 000 00000000000 0 00111111 1111000
Q ss_pred hhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcce
Q 024228 193 PAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLV 243 (270)
Q Consensus 193 ~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 243 (270)
..-.+.++.+|++++.|++|.++|++.+..+.+.+.++.+++..+ +||..
T Consensus 433 ~~idL~~I~~Pvl~va~~~DHIvPw~s~~~~~~l~gs~~~fvl~~-gGHIg 482 (560)
T TIGR01839 433 TPIDLKKVKCDSFSVAGTNDHITPWDAVYRSALLLGGKRRFVLSN-SGHIQ 482 (560)
T ss_pred EEechhcCCCCeEEEecCcCCcCCHHHHHHHHHHcCCCeEEEecC-CCccc
Confidence 112234444999999999999999999999999988677777776 58875
No 103
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.60 E-value=3.3e-13 Score=89.48 Aligned_cols=181 Identities=14% Similarity=0.078 Sum_probs=123.7
Q ss_pred CCceEEEeCCCCCccc-ccHHHHHHHhhcc-ceEEeecCCCC-----CCCCCCCCC-CChHHHHHHHHHHHHHhCCCceE
Q 024228 44 KKHAVVLLHPFGFDGI-LTWQFQVLALAKT-YEVYVPDFLFF-----GSSVTDRPD-RTASFQAECMAKGLRKLGVEKCT 115 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~-~~~~~~~~~l~~~-~~v~~~d~~g~-----G~s~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~ 115 (270)
..-+||+.||.+.+.+ ......+..|+.. +.|..|+++.. |...+++.. .-...+...+.++.+.+...+.+
T Consensus 13 ~~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l~~gpLi 92 (213)
T COG3571 13 APVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGLAEGPLI 92 (213)
T ss_pred CCEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhcccCCcee
Confidence 3457889999998777 3556677888888 99999998753 322222222 33345566677777777777999
Q ss_pred EEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccHHHHHHHHHhhhhcCCCChhh
Q 024228 116 LVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAF 195 (270)
Q Consensus 116 l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (270)
+-|+||||.++...+....-.|+++++++-+...+..... ....
T Consensus 93 ~GGkSmGGR~aSmvade~~A~i~~L~clgYPfhppGKPe~------------------------------------~Rt~ 136 (213)
T COG3571 93 IGGKSMGGRVASMVADELQAPIDGLVCLGYPFHPPGKPEQ------------------------------------LRTE 136 (213)
T ss_pred eccccccchHHHHHHHhhcCCcceEEEecCccCCCCCccc------------------------------------chhh
Confidence 9999999999998887765559999998865543322111 0111
Q ss_pred hhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceee----------cchHhHHHHHHHHHHhh
Q 024228 196 VYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNL----------ERPFVYNRQLKTILASL 262 (270)
Q Consensus 196 ~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~----------~~~~~~~~~i~~fl~~~ 262 (270)
.+..+.+|++|.+|+.|++-..+.+..+. +....++++++++.|..-- ++-...++.|..|..++
T Consensus 137 HL~gl~tPtli~qGtrD~fGtr~~Va~y~--ls~~iev~wl~~adHDLkp~k~vsgls~~~hL~~~A~~va~~~~~l 211 (213)
T COG3571 137 HLTGLKTPTLITQGTRDEFGTRDEVAGYA--LSDPIEVVWLEDADHDLKPRKLVSGLSTADHLKTLAEQVAGWARRL 211 (213)
T ss_pred hccCCCCCeEEeecccccccCHHHHHhhh--cCCceEEEEeccCccccccccccccccHHHHHHHHHHHHHHHHhhc
Confidence 23344489999999999998776663332 3347899999999998632 22344667777777654
No 104
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.59 E-value=1.1e-14 Score=87.86 Aligned_cols=76 Identities=24% Similarity=0.200 Sum_probs=64.8
Q ss_pred CeEEEEEecCCCC-CCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCC-CChHHHHHHHHHHHH
Q 024228 31 GTILNIWVPKKTT-KKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPD-RTASFQAECMAKGLR 107 (270)
Q Consensus 31 g~~l~~~~~~~~~-~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~-~~~~~~~~~~~~~l~ 107 (270)
|.+|++....++. .+.+|+++||++..+. .|..+++.|+++ |.|+++|+||||.|+..... .+++++++|+..+++
T Consensus 1 G~~L~~~~w~p~~~~k~~v~i~HG~~eh~~-ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 1 GTKLFYRRWKPENPPKAVVVIVHGFGEHSG-RYAHLAEFLAEQGYAVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred CcEEEEEEecCCCCCCEEEEEeCCcHHHHH-HHHHHHHHHHhCCCEEEEECCCcCCCCCCcccccCCHHHHHHHHHHHhC
Confidence 5677776655544 4889999999999999 999999999999 99999999999999976544 788999999988764
No 105
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.58 E-value=2.7e-13 Score=102.02 Aligned_cols=120 Identities=23% Similarity=0.322 Sum_probs=97.8
Q ss_pred EEeecCCeEEEEEecCCC-----CCCceEEEeCCCCCcccccHHHHHHHhhc--------c--ceEEeecCCCCCCCCCC
Q 024228 25 TIEIEPGTILNIWVPKKT-----TKKHAVVLLHPFGFDGILTWQFQVLALAK--------T--YEVYVPDFLFFGSSVTD 89 (270)
Q Consensus 25 ~i~~~~g~~l~~~~~~~~-----~~~~~vv~~hG~~~~~~~~~~~~~~~l~~--------~--~~v~~~d~~g~G~s~~~ 89 (270)
+.++ .|.++|+.....+ ..-.+++++|||+|+.. .|-.+++.|.+ . |.|+++.+||+|.|+.+
T Consensus 128 kTeI-eGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~-EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~ 205 (469)
T KOG2565|consen 128 KTEI-EGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVR-EFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAP 205 (469)
T ss_pred hhhh-cceeEEEEEecCCccccCCcccceEEecCCCchHH-HHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCC
Confidence 3344 5888887544332 22358999999999999 88788887753 2 89999999999999987
Q ss_pred CC-CCChHHHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEeccc
Q 024228 90 RP-DRTASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSV 146 (270)
Q Consensus 90 ~~-~~~~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~ 146 (270)
.. .++....+.-+..++-.++.+++.+-|-.||+.++..+|..+|++|.|+=+--+.
T Consensus 206 sk~GFn~~a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snlasLyPenV~GlHlnm~~ 263 (469)
T KOG2565|consen 206 SKTGFNAAATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLASLYPENVLGLHLNMCF 263 (469)
T ss_pred ccCCccHHHHHHHHHHHHHHhCcceeEeecCchHHHHHHHHHhhcchhhhHhhhcccc
Confidence 74 4888888889999999999999999999999999999999999999887654433
No 106
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=99.58 E-value=3.6e-13 Score=91.16 Aligned_cols=172 Identities=15% Similarity=0.069 Sum_probs=116.5
Q ss_pred ceEEEeCCCCCcccccHHHHHH-HhhccceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEEchhHH
Q 024228 46 HAVVLLHPFGFDGILTWQFQVL-ALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVSYGGM 124 (270)
Q Consensus 46 ~~vv~~hG~~~~~~~~~~~~~~-~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~ 124 (270)
+.+|++||+.++....|+...+ .+. .+-.+++. .......++|++.+.+.+... .++++||+||+|+.
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~we~~l~---~a~rveq~-------~w~~P~~~dWi~~l~~~v~a~-~~~~vlVAHSLGc~ 71 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSRWESALP---NARRVEQD-------DWEAPVLDDWIARLEKEVNAA-EGPVVLVAHSLGCA 71 (181)
T ss_pred ceEEEecCCCCCChhHHHHHHHhhCc---cchhcccC-------CCCCCCHHHHHHHHHHHHhcc-CCCeEEEEecccHH
Confidence 5689999999887757765432 222 22223322 123357888888888888877 46799999999999
Q ss_pred HHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhheee
Q 024228 125 VGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEKI 204 (270)
Q Consensus 125 ~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 204 (270)
+++.++......|.|+++++|+-............ ...... .....-|.
T Consensus 72 ~v~h~~~~~~~~V~GalLVAppd~~~~~~~~~~~~-----------------------tf~~~p--------~~~lpfps 120 (181)
T COG3545 72 TVAHWAEHIQRQVAGALLVAPPDVSRPEIRPKHLM-----------------------TFDPIP--------REPLPFPS 120 (181)
T ss_pred HHHHHHHhhhhccceEEEecCCCccccccchhhcc-----------------------ccCCCc--------cccCCCce
Confidence 99999998877899999999875432211110000 000000 11222689
Q ss_pred eEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeec---chHhHHHHHHHHHHh
Q 024228 205 HLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLE---RPFVYNRQLKTILAS 261 (270)
Q Consensus 205 l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~---~~~~~~~~i~~fl~~ 261 (270)
+++.+.+|++++++.++.+++.+ ...++.+..+||..-.. .=.+....+.+|+.+
T Consensus 121 ~vvaSrnDp~~~~~~a~~~a~~w--gs~lv~~g~~GHiN~~sG~g~wpeg~~~l~~~~s~ 178 (181)
T COG3545 121 VVVASRNDPYVSYEHAEDLANAW--GSALVDVGEGGHINAESGFGPWPEGYALLAQLLSR 178 (181)
T ss_pred eEEEecCCCCCCHHHHHHHHHhc--cHhheecccccccchhhcCCCcHHHHHHHHHHhhh
Confidence 99999999999999999999998 47888888899986432 113345666666654
No 107
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.54 E-value=2.1e-12 Score=97.48 Aligned_cols=103 Identities=15% Similarity=0.081 Sum_probs=84.6
Q ss_pred CceEEEeCCCCCcccccHHHHHHHhh----ccceEEeecCCCCCCCCCC------CCCCChHHHHHHHHHHHHHh-----
Q 024228 45 KHAVVLLHPFGFDGILTWQFQVLALA----KTYEVYVPDFLFFGSSVTD------RPDRTASFQAECMAKGLRKL----- 109 (270)
Q Consensus 45 ~~~vv~~hG~~~~~~~~~~~~~~~l~----~~~~v~~~d~~g~G~s~~~------~~~~~~~~~~~~~~~~l~~~----- 109 (270)
+..+++++|.+|-.+ .|..++..|. .++.|+++.+.||-.++.. ...+++++.++-..++++++
T Consensus 2 ~~li~~IPGNPGlv~-fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~ 80 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVE-FYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKN 80 (266)
T ss_pred cEEEEEECCCCChHH-HHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhc
Confidence 567999999999999 9999887776 3399999999999777654 23478888877777776654
Q ss_pred -CCCceEEEEEchhHHHHHHHHhhCc---cccccEEEecccCC
Q 024228 110 -GVEKCTLVGVSYGGMVGFKMAEMYP---DLVESMVVTCSVMG 148 (270)
Q Consensus 110 -~~~~~~l~G~S~Gg~~a~~~a~~~p---~~v~~~i~~~~~~~ 148 (270)
...+++|+|||.|++++++++.+.+ .+|.+++++-|...
T Consensus 81 ~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~ 123 (266)
T PF10230_consen 81 KPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIE 123 (266)
T ss_pred CCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCccc
Confidence 2347999999999999999999998 68999999988753
No 108
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=99.53 E-value=2.4e-12 Score=97.70 Aligned_cols=211 Identities=15% Similarity=0.167 Sum_probs=124.6
Q ss_pred CCCceEEEeCCCCCcccccHHH--H-HHHhhcc-ceEEeecCCCCCCCCCCCCC----CChHHH----------HHHHHH
Q 024228 43 TKKHAVVLLHPFGFDGILTWQF--Q-VLALAKT-YEVYVPDFLFFGSSVTDRPD----RTASFQ----------AECMAK 104 (270)
Q Consensus 43 ~~~~~vv~~hG~~~~~~~~~~~--~-~~~l~~~-~~v~~~d~~g~G~s~~~~~~----~~~~~~----------~~~~~~ 104 (270)
+.+|.+|.++|.|... .|++ + +..|.+. +..+.+..|-||...+.... .+..++ +..+..
T Consensus 90 ~~rp~~IhLagTGDh~--f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~ 167 (348)
T PF09752_consen 90 PYRPVCIHLAGTGDHG--FWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLH 167 (348)
T ss_pred CCCceEEEecCCCccc--hhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHH
Confidence 4578899999988754 4433 3 4555555 99999999999987654322 222222 223344
Q ss_pred HHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhh------------c--
Q 024228 105 GLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDF------------L-- 170 (270)
Q Consensus 105 ~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~-- 170 (270)
+++.-+..++.+.|.||||.+|..+|...|..+..+-++++.................+...... .
T Consensus 168 Wl~~~G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~vFt~Gvls~~i~W~~L~~q~~~~~~~~~~~~~~~ 247 (348)
T PF09752_consen 168 WLEREGYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASVVFTEGVLSNSINWDALEKQFEDTVYEEEISDIPA 247 (348)
T ss_pred HHHhcCCCceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCcchhhhhhhcCCCHHHHHHHhcccchhhhhccccc
Confidence 55555888999999999999999999999987766666655432111000000000001000000 0
Q ss_pred ------------ccccHHHHHHHH--HhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEe
Q 024228 171 ------------LPKTADALKVQF--DIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESI 236 (270)
Q Consensus 171 ------------~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~ 236 (270)
.....+...... .........++... -...+.++.+++|.+||......+.+..| ++++..+
T Consensus 248 ~~~~~~~~~~~~~~~~~Ea~~~m~~~md~~T~l~nf~~P~---dp~~ii~V~A~~DaYVPr~~v~~Lq~~WP-GsEvR~l 323 (348)
T PF09752_consen 248 QNKSLPLDSMEERRRDREALRFMRGVMDSFTHLTNFPVPV---DPSAIIFVAAKNDAYVPRHGVLSLQEIWP-GSEVRYL 323 (348)
T ss_pred CcccccchhhccccchHHHHHHHHHHHHhhccccccCCCC---CCCcEEEEEecCceEechhhcchHHHhCC-CCeEEEe
Confidence 000000000000 00000000000000 00357899999999999999999999998 9999999
Q ss_pred cCCCcceee-cchHhHHHHHHHHHH
Q 024228 237 EKAGHLVNL-ERPFVYNRQLKTILA 260 (270)
Q Consensus 237 ~~~gH~~~~-~~~~~~~~~i~~fl~ 260 (270)
++ ||..-+ -+.+.+.+.|.+-++
T Consensus 324 ~g-GHVsA~L~~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 324 PG-GHVSAYLLHQEAFRQAIYDAFE 347 (348)
T ss_pred cC-CcEEEeeechHHHHHHHHHHhh
Confidence 86 998754 667778888887664
No 109
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=99.52 E-value=1.1e-11 Score=95.21 Aligned_cols=231 Identities=13% Similarity=0.100 Sum_probs=135.1
Q ss_pred ceeEEEeec--CCeEEEEEecCCC---CCCceEEEeCCCCCccc----ccHHHHHHHhhcc--ceEEeecCCCCCCCCCC
Q 024228 21 MTQRTIEIE--PGTILNIWVPKKT---TKKHAVVLLHPFGFDGI----LTWQFQVLALAKT--YEVYVPDFLFFGSSVTD 89 (270)
Q Consensus 21 ~~~~~i~~~--~g~~l~~~~~~~~---~~~~~vv~~hG~~~~~~----~~~~~~~~~l~~~--~~v~~~d~~g~G~s~~~ 89 (270)
+....+... ++..++.+.+... ...|.||++||+|.... ..|..+...+++. ..|+++|||---+..-+
T Consensus 61 v~~~dv~~~~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh~~P 140 (336)
T KOG1515|consen 61 VTSKDVTIDPFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEHPFP 140 (336)
T ss_pred ceeeeeEecCCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCCCCC
Confidence 333444444 5667777776653 34689999999874222 3777888888666 88999999944433322
Q ss_pred CCCCChHHHHHHHHHHHHH------hCCCceEEEEEchhHHHHHHHHhhC------ccccccEEEecccCCCCchhhhHh
Q 024228 90 RPDRTASFQAECMAKGLRK------LGVEKCTLVGVSYGGMVGFKMAEMY------PDLVESMVVTCSVMGLTESVSNAA 157 (270)
Q Consensus 90 ~~~~~~~~~~~~~~~~l~~------~~~~~~~l~G~S~Gg~~a~~~a~~~------p~~v~~~i~~~~~~~~~~~~~~~~ 157 (270)
...++..+.+..+.+. .+.++++|+|-|.||.+|..+|.+. +.++++.|++.|............
T Consensus 141 ---a~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~~~~e~ 217 (336)
T KOG1515|consen 141 ---AAYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDRTESEK 217 (336)
T ss_pred ---ccchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCCCCHHH
Confidence 3344444444444442 3567899999999999999888763 347999999999876544333222
Q ss_pred hhhccchhhhhhcccccHHHHHHHHHhhh---h---cCCCChh-------hhhhhhheeeeEEEcCCCccCCHHHHHHHH
Q 024228 158 LERIGYESWVDFLLPKTADALKVQFDIAC---Y---KLPTLPA-------FVYKHILEKIHLLWGENDKIFDMQVARNLK 224 (270)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~-------~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~ 224 (270)
....... ..........++.... . ...+... ........|++++.++.|.+.. ....+.
T Consensus 218 ~~~~~~~------~~~~~~~~~~~w~~~lP~~~~~~~~p~~np~~~~~~~d~~~~~lp~tlv~~ag~D~L~D--~~~~Y~ 289 (336)
T KOG1515|consen 218 QQNLNGS------PELARPKIDKWWRLLLPNGKTDLDHPFINPVGNSLAKDLSGLGLPPTLVVVAGYDVLRD--EGLAYA 289 (336)
T ss_pred HHhhcCC------cchhHHHHHHHHHHhCCCCCCCcCCccccccccccccCccccCCCceEEEEeCchhhhh--hhHHHH
Confidence 1111110 0011111111111000 0 0000000 0111122679999999998864 444444
Q ss_pred HHhc---CCceEEEecCCCcceeecch-----HhHHHHHHHHHHhh
Q 024228 225 EQVG---QNATMESIEKAGHLVNLERP-----FVYNRQLKTILASL 262 (270)
Q Consensus 225 ~~~~---~~~~~~~~~~~gH~~~~~~~-----~~~~~~i~~fl~~~ 262 (270)
+++. -.+++..++++.|.++.-.+ .++.+.+.+|+++.
T Consensus 290 ~~Lkk~Gv~v~~~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~~ 335 (336)
T KOG1515|consen 290 EKLKKAGVEVTLIHYEDGFHGFHILDPSSKEAHALMDAIVEFIKSN 335 (336)
T ss_pred HHHHHcCCeEEEEEECCCeeEEEecCCchhhHHHHHHHHHHHHhhc
Confidence 4443 24566789999999987433 45667778887653
No 110
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.52 E-value=4.3e-13 Score=98.33 Aligned_cols=183 Identities=19% Similarity=0.179 Sum_probs=114.1
Q ss_pred EEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHH----
Q 024228 34 LNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRK---- 108 (270)
Q Consensus 34 l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~---- 108 (270)
+-++.+.....-|++||+||+..... .|..+.++++++ |-|+.+|+...+...............+++.+-++.
T Consensus 6 l~v~~P~~~g~yPVv~f~~G~~~~~s-~Ys~ll~hvAShGyIVV~~d~~~~~~~~~~~~~~~~~~vi~Wl~~~L~~~l~~ 84 (259)
T PF12740_consen 6 LLVYYPSSAGTYPVVLFLHGFLLINS-WYSQLLEHVASHGYIVVAPDLYSIGGPDDTDEVASAAEVIDWLAKGLESKLPL 84 (259)
T ss_pred eEEEecCCCCCcCEEEEeCCcCCCHH-HHHHHHHHHHhCceEEEEecccccCCCCcchhHHHHHHHHHHHHhcchhhccc
Confidence 44455656567899999999997766 899999999999 999999976533311111111112222222221111
Q ss_pred ---hCCCceEEEEEchhHHHHHHHHhhC-----ccccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccHHHHHH
Q 024228 109 ---LGVEKCTLVGVSYGGMVGFKMAEMY-----PDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKV 180 (270)
Q Consensus 109 ---~~~~~~~l~G~S~Gg~~a~~~a~~~-----p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (270)
.+..++.|.|||.||-+|..++..+ +.+++++++++|+......... .+...
T Consensus 85 ~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVdG~~~~~~~---------------~P~v~----- 144 (259)
T PF12740_consen 85 GVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVDGMSKGSQT---------------EPPVL----- 144 (259)
T ss_pred cccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEeccccccccccCC---------------CCccc-----
Confidence 1345899999999999999999887 4589999999998642211000 00000
Q ss_pred HHHhhhhcCCCChhhhhhhhheeeeEEEcCCCc---------cCCHH-HHHHHHHHhcCCceEEEecCCCcceeecch
Q 024228 181 QFDIACYKLPTLPAFVYKHILEKIHLLWGENDK---------IFDMQ-VARNLKEQVGQNATMESIEKAGHLVNLERP 248 (270)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~---------~~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~ 248 (270)
.+. ...-++..|+++|-..-+. ..|.. .-+++++......-..+..++||+-+++..
T Consensus 145 -----~~~------p~s~~~~~P~lviGtGLg~~~~~~~~~~CaP~g~n~~~Ff~~~~~p~~~~v~~~~GH~d~LDd~ 211 (259)
T PF12740_consen 145 -----TYT------PQSFDFSMPALVIGTGLGGEPRNPLFPPCAPAGVNYREFFDECKPPSWHFVAKDYGHMDFLDDD 211 (259)
T ss_pred -----cCc------ccccCCCCCeEEEecccCcccccccCCCCCCCCCCHHHHHHhcCCCEEEEEeCCCCchHhhcCC
Confidence 000 0011122799999777664 22322 446677777656667777889999988654
No 111
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.51 E-value=1.7e-13 Score=115.30 Aligned_cols=107 Identities=16% Similarity=0.106 Sum_probs=82.9
Q ss_pred EEeecCCeEEEEEecCC--------CCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCC------
Q 024228 25 TIEIEPGTILNIWVPKK--------TTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTD------ 89 (270)
Q Consensus 25 ~i~~~~g~~l~~~~~~~--------~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~------ 89 (270)
.+..+++.++.|...+. ..+.|+||++||++++.. .|..+++.|.+. |+|+++|+||||.|...
T Consensus 421 ~~~~p~~~~i~~~~~~~g~~~~~~p~~g~P~VVllHG~~g~~~-~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~ 499 (792)
T TIGR03502 421 LLTTPNGPVIAAFRAGTGLETFAAPTDGWPVVIYQHGITGAKE-NALAFAGTLAAAGVATIAIDHPLHGARSFDANASGV 499 (792)
T ss_pred EEEecCcchhhhhhcccccccccCCCCCCcEEEEeCCCCCCHH-HHHHHHHHHHhCCcEEEEeCCCCCCccccccccccc
Confidence 34445677776654322 123468999999999999 999999999866 99999999999999433
Q ss_pred ---CC--------------CCChHHHHHHHHHHHHHhC----------------CCceEEEEEchhHHHHHHHHhh
Q 024228 90 ---RP--------------DRTASFQAECMAKGLRKLG----------------VEKCTLVGVSYGGMVGFKMAEM 132 (270)
Q Consensus 90 ---~~--------------~~~~~~~~~~~~~~l~~~~----------------~~~~~l~G~S~Gg~~a~~~a~~ 132 (270)
.. ..++.+.+.|+..+...+. ..+++++||||||.++..++..
T Consensus 500 ~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 500 NATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred cccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 10 1267888889888877775 3489999999999999999875
No 112
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.51 E-value=5.1e-13 Score=122.79 Aligned_cols=197 Identities=12% Similarity=0.043 Sum_probs=124.5
Q ss_pred CCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCC-CceEEEEEchh
Q 024228 44 KKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGV-EKCTLVGVSYG 122 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~l~G~S~G 122 (270)
++++++++||++++.. .|..+.+.|...+.|+.++.+|++.+. ....+++.+++++.+.++.+.. .+++++|||+|
T Consensus 1067 ~~~~l~~lh~~~g~~~-~~~~l~~~l~~~~~v~~~~~~g~~~~~--~~~~~l~~la~~~~~~i~~~~~~~p~~l~G~S~G 1143 (1296)
T PRK10252 1067 DGPTLFCFHPASGFAW-QFSVLSRYLDPQWSIYGIQSPRPDGPM--QTATSLDEVCEAHLATLLEQQPHGPYHLLGYSLG 1143 (1296)
T ss_pred CCCCeEEecCCCCchH-HHHHHHHhcCCCCcEEEEECCCCCCCC--CCCCCHHHHHHHHHHHHHhhCCCCCEEEEEechh
Confidence 3578999999999998 999999999888999999999998653 3457999999999999988654 48999999999
Q ss_pred HHHHHHHHhh---CccccccEEEecccCCCCchhhhH--------hhhhcc--chhhhhhc----ccccHHHHHHHHHhh
Q 024228 123 GMVGFKMAEM---YPDLVESMVVTCSVMGLTESVSNA--------ALERIG--YESWVDFL----LPKTADALKVQFDIA 185 (270)
Q Consensus 123 g~~a~~~a~~---~p~~v~~~i~~~~~~~~~~~~~~~--------~~~~~~--~~~~~~~~----~~~~~~~~~~~~~~~ 185 (270)
|.+|..+|.+ .++++..++++++........... ...... ........ .......+...+...
T Consensus 1144 g~vA~e~A~~l~~~~~~v~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1223 (1296)
T PRK10252 1144 GTLAQGIAARLRARGEEVAFLGLLDTWPPETQNWREKEANGLDPEVLAEIDREREAFLAAQQGSLSTELFTTIEGNYADA 1223 (1296)
T ss_pred hHHHHHHHHHHHHcCCceeEEEEecCCCcccccccccccccCChhhhhhhhhhHHHHHHhhhccccHHHHHHHHHHHHHH
Confidence 9999999986 467899999988643211000000 000000 00000000 000001111111110
Q ss_pred hhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecch
Q 024228 186 CYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERP 248 (270)
Q Consensus 186 ~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~ 248 (270)
.. .........+.+|++++.++.|...+......+.+.. ++.+...++ ++|+.+...+
T Consensus 1224 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~-~~~~~~~v~-g~H~~~~~~~ 1281 (1296)
T PRK10252 1224 VR---LLTTAHSVPFDGKATLFVAERTLQEGMSPEQAWSPWI-AELDVYRQD-CAHVDIISPE 1281 (1296)
T ss_pred HH---HHHhccCCcccCceEEEEcCCCCcccCCcccchhhhc-CCCEEEECC-CCHHHHCCcH
Confidence 00 0000011223388999999988765544444555555 478888886 5999977444
No 113
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.50 E-value=4.8e-13 Score=99.93 Aligned_cols=210 Identities=16% Similarity=0.101 Sum_probs=80.0
Q ss_pred CCceEEEeCCCCCccc--ccHHHHHHHhhcc-ceEEeecCC----CCCCCCCCCCCCChHHHHHHHHHHHHHh-------
Q 024228 44 KKHAVVLLHPFGFDGI--LTWQFQVLALAKT-YEVYVPDFL----FFGSSVTDRPDRTASFQAECMAKGLRKL------- 109 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~--~~~~~~~~~l~~~-~~v~~~d~~----g~G~s~~~~~~~~~~~~~~~~~~~l~~~------- 109 (270)
....|||+.|.+.... .+...+++.|.+. |.++-+-++ |+|. .+++.-++||.++++.+
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~-------~SL~~D~~eI~~~v~ylr~~~~g~ 104 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGT-------SSLDRDVEEIAQLVEYLRSEKGGH 104 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S---------HHHHHHHHHHHHHHHHHHS---
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCc-------chhhhHHHHHHHHHHHHHHhhccc
Confidence 4668999999886544 4677888999765 999998865 3443 45777777777776654
Q ss_pred -CCCceEEEEEchhHHHHHHHHhhCc-----cccccEEEecccCCCCchhh--------hHhhh---hccchhhhhhccc
Q 024228 110 -GVEKCTLVGVSYGGMVGFKMAEMYP-----DLVESMVVTCSVMGLTESVS--------NAALE---RIGYESWVDFLLP 172 (270)
Q Consensus 110 -~~~~~~l~G~S~Gg~~a~~~a~~~p-----~~v~~~i~~~~~~~~~~~~~--------~~~~~---~~~~~~~~~~~~~ 172 (270)
+.++|+|+|||.|+.-++.|+.... ..|+++|+-+|+.+...... ..... .+..........+
T Consensus 105 ~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~~~~~~~~~~~~~v~~A~~~i~~g~~~~~lp 184 (303)
T PF08538_consen 105 FGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAILNFLGEREAYEELVALAKELIAEGKGDEILP 184 (303)
T ss_dssp ---S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTTTSHHH---HHHHHHHHHHHHHCT-TT-GG-
T ss_pred cCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhhhcccchHHHHHHHHHHHHHHHcCCCCceee
Confidence 3468999999999999999988752 56999999999876432111 11000 0000000000000
Q ss_pred ---------ccHHHHHHHHHhhhhc----------CCCChhhhhhhhheeeeEEEcCCCccCCHHHH-HHHHHHhc----
Q 024228 173 ---------KTADALKVQFDIACYK----------LPTLPAFVYKHILEKIHLLWGENDKIFDMQVA-RNLKEQVG---- 228 (270)
Q Consensus 173 ---------~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~-~~~~~~~~---- 228 (270)
...-....+++..... ....-...+..+..|+|++.+++|..||...- +.+.+++.
T Consensus 185 ~~~~~~~~~~~PiTA~Rf~SL~s~~gdDD~FSSDL~de~l~~tfG~v~~plLvl~Sg~DEyvP~~vdk~~Ll~rw~~a~~ 264 (303)
T PF08538_consen 185 REFTPLVFYDTPITAYRFLSLASPGGDDDYFSSDLSDERLKKTFGKVSKPLLVLYSGKDEYVPPWVDKEALLERWKAATN 264 (303)
T ss_dssp ---GGTTT-SS---HHHHHT-S-SSHHHHTHHHHHTT-HHHHTGGG--S-EEEEEE--TT--------------------
T ss_pred ccccccccCCCcccHHHHHhccCCCCcccccCCCCCHHHHHHHhccCCCceEEEecCCCceecccccccccccccccccc
Confidence 1111111222111100 00111223344448999999999999986432 23333322
Q ss_pred C---CceEEEecCCCcceeecch----HhHHHHHHHHHH
Q 024228 229 Q---NATMESIEKAGHLVNLERP----FVYNRQLKTILA 260 (270)
Q Consensus 229 ~---~~~~~~~~~~gH~~~~~~~----~~~~~~i~~fl~ 260 (270)
+ ...--++|||+|.+-.+.. +.+.+.+..||+
T Consensus 265 ~~~~s~~S~iI~GA~H~~~~~~~~~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 265 PKIWSPLSGIIPGASHNVSGPSQAEAREWLVERVVKFLK 303 (303)
T ss_dssp ---------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccCC
Confidence 1 1224589999999865332 357777788774
No 114
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.47 E-value=3.7e-12 Score=99.23 Aligned_cols=218 Identities=18% Similarity=0.102 Sum_probs=117.7
Q ss_pred eEEEEEec--CCCCCCceEEEeCCCCCccc--ccHHHHHHHh-hcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHH
Q 024228 32 TILNIWVP--KKTTKKHAVVLLHPFGFDGI--LTWQFQVLAL-AKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKG 105 (270)
Q Consensus 32 ~~l~~~~~--~~~~~~~~vv~~hG~~~~~~--~~~~~~~~~l-~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~ 105 (270)
..+..+.+ ....+.|+||++||++.... .....++..+ ... +.|+++|||-..+.. .....++..+.+..+
T Consensus 64 ~~~~~y~p~~~~~~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~~---~p~~~~d~~~a~~~l 140 (312)
T COG0657 64 VPVRVYRPDRKAAATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEHP---FPAALEDAYAAYRWL 140 (312)
T ss_pred eeEEEECCCCCCCCCCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCCC---CCchHHHHHHHHHHH
Confidence 45555665 33345799999999875433 1333444444 334 999999999543332 112333333333333
Q ss_pred HHH---h--CCCceEEEEEchhHHHHHHHHhhCcc----ccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccHH
Q 024228 106 LRK---L--GVEKCTLVGVSYGGMVGFKMAEMYPD----LVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTAD 176 (270)
Q Consensus 106 l~~---~--~~~~~~l~G~S~Gg~~a~~~a~~~p~----~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (270)
.++ + +.+++.+.|+|.||.+++.++....+ ...+.+++.|...... ..... ...... ..+......
T Consensus 141 ~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~-~~~~~-~~~~~~---~~~~~~~~~ 215 (312)
T COG0657 141 RANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTS-SAASL-PGYGEA---DLLDAAAIL 215 (312)
T ss_pred HhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcc-cccch-hhcCCc---cccCHHHHH
Confidence 333 2 35689999999999999998877543 4788899998876554 11110 000000 000000000
Q ss_pred -HHHHHHHhhh-hc----CCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc---CCceEEEecCCCcceeecc
Q 024228 177 -ALKVQFDIAC-YK----LPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG---QNATMESIEKAGHLVNLER 247 (270)
Q Consensus 177 -~~~~~~~~~~-~~----~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~~~~~ 247 (270)
.+...+.... .. ........+.. ..|+++++|+.|.+.+ ....+.+++. ..++++.+++..|.+..-.
T Consensus 216 ~~~~~~~~~~~~~~~~p~~spl~~~~~~~-lPP~~i~~a~~D~l~~--~~~~~a~~L~~agv~~~~~~~~g~~H~f~~~~ 292 (312)
T COG0657 216 AWFADLYLGAAPDREDPEASPLASDDLSG-LPPTLIQTAEFDPLRD--EGEAYAERLRAAGVPVELRVYPGMIHGFDLLT 292 (312)
T ss_pred HHHHHHhCcCccccCCCccCccccccccC-CCCEEEEecCCCcchh--HHHHHHHHHHHcCCeEEEEEeCCcceeccccC
Confidence 0111110000 00 00011111233 4899999999999987 4445555443 2578999999999764433
Q ss_pred -hH--hHHHHHHHHHH
Q 024228 248 -PF--VYNRQLKTILA 260 (270)
Q Consensus 248 -~~--~~~~~i~~fl~ 260 (270)
++ .....+.+|+.
T Consensus 293 ~~~a~~~~~~~~~~l~ 308 (312)
T COG0657 293 GPEARSALRQIAAFLR 308 (312)
T ss_pred cHHHHHHHHHHHHHHH
Confidence 22 22344555554
No 115
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.47 E-value=1.5e-11 Score=93.79 Aligned_cols=119 Identities=19% Similarity=0.233 Sum_probs=79.0
Q ss_pred CCeEEEE--Eec--CCCCCCceEEEeCCCCCcccccHHHH---H------HHhhcc-ceEEeecCCCCCCCCCCCCCCCh
Q 024228 30 PGTILNI--WVP--KKTTKKHAVVLLHPFGFDGILTWQFQ---V------LALAKT-YEVYVPDFLFFGSSVTDRPDRTA 95 (270)
Q Consensus 30 ~g~~l~~--~~~--~~~~~~~~vv~~hG~~~~~~~~~~~~---~------~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~ 95 (270)
||.+|.. +.+ ....+.|+||..|+++.......... . ..+.++ |.|+..|.||.|.|+...... .
T Consensus 1 DGv~L~adv~~P~~~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~-~ 79 (272)
T PF02129_consen 1 DGVRLAADVYRPGADGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPM-S 79 (272)
T ss_dssp TS-EEEEEEEEE--TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TT-S
T ss_pred CCCEEEEEEEecCCCCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccC-C
Confidence 6777764 556 34456689999999986542011111 1 126666 999999999999999765443 4
Q ss_pred HHHHHHHHHHHHHhC-----CCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCC
Q 024228 96 SFQAECMAKGLRKLG-----VEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGL 149 (270)
Q Consensus 96 ~~~~~~~~~~l~~~~-----~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~ 149 (270)
....+|..++|+.+. ..+|.++|.|++|..++.+|+..|..+++++...+..+.
T Consensus 80 ~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~ 138 (272)
T PF02129_consen 80 PNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDL 138 (272)
T ss_dssp HHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBT
T ss_pred hhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCcc
Confidence 445666666666552 248999999999999999999888899999998776554
No 116
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.46 E-value=8.2e-12 Score=106.94 Aligned_cols=197 Identities=12% Similarity=0.057 Sum_probs=117.7
Q ss_pred HHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhC--------------------CCceEEEEEchhH
Q 024228 65 QVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLG--------------------VEKCTLVGVSYGG 123 (270)
Q Consensus 65 ~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~--------------------~~~~~l~G~S~Gg 123 (270)
+.+.+.++ |.|+..|.||+|.|++...... ....+|..++|+.+. ..+|.++|.|+||
T Consensus 271 ~~~~~~~rGYaVV~~D~RGtg~SeG~~~~~~-~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G 349 (767)
T PRK05371 271 LNDYFLPRGFAVVYVSGIGTRGSDGCPTTGD-YQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLG 349 (767)
T ss_pred HHHHHHhCCeEEEEEcCCCCCCCCCcCccCC-HHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHH
Confidence 34667777 9999999999999998653332 233556666665553 3689999999999
Q ss_pred HHHHHHHhhCccccccEEEecccCCCCchhhhHh-hh-hccc-----hhhhhh-----ccc----ccHHHHHHHHH---h
Q 024228 124 MVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAA-LE-RIGY-----ESWVDF-----LLP----KTADALKVQFD---I 184 (270)
Q Consensus 124 ~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~-~~-~~~~-----~~~~~~-----~~~----~~~~~~~~~~~---~ 184 (270)
.+++.+|...|+.++++|..++............ .. ..++ ...... ... ........... .
T Consensus 350 ~~~~~aAa~~pp~LkAIVp~a~is~~yd~yr~~G~~~~~~g~~ged~d~l~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 429 (767)
T PRK05371 350 TLPNAVATTGVEGLETIIPEAAISSWYDYYRENGLVRAPGGYQGEDLDVLAELTYSRNLLAGDYLRHNEACEKLLAELTA 429 (767)
T ss_pred HHHHHHHhhCCCcceEEEeeCCCCcHHHHhhcCCceeccCCcCCcchhhHHHHhhhcccCcchhhcchHHHHHHHhhhhh
Confidence 9999999998888999999887654321110000 00 0000 000000 000 00011111100 0
Q ss_pred -h-----hhcCCC---ChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc---CCceEEEecCCCcceee-cchHhH
Q 024228 185 -A-----CYKLPT---LPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG---QNATMESIEKAGHLVNL-ERPFVY 251 (270)
Q Consensus 185 -~-----~~~~~~---~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~~~-~~~~~~ 251 (270)
. .+...| .......++.+|+|+++|..|..++++.+.++++.+. ...++.+.+ .+|.... ..+..+
T Consensus 430 ~~~~~~~~y~~fW~~rn~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l~~-g~H~~~~~~~~~d~ 508 (767)
T PRK05371 430 AQDRKTGDYNDFWDDRNYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLFLHQ-GGHVYPNNWQSIDF 508 (767)
T ss_pred hhhhcCCCccHHHHhCCHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEEEeC-CCccCCCchhHHHH
Confidence 0 000011 1123345566999999999999999888878777764 245666665 4786543 344567
Q ss_pred HHHHHHHHHhhh
Q 024228 252 NRQLKTILASLV 263 (270)
Q Consensus 252 ~~~i~~fl~~~~ 263 (270)
.+.+.+|+....
T Consensus 509 ~e~~~~Wfd~~L 520 (767)
T PRK05371 509 RDTMNAWFTHKL 520 (767)
T ss_pred HHHHHHHHHhcc
Confidence 777888886654
No 117
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=99.46 E-value=7.4e-12 Score=92.85 Aligned_cols=201 Identities=15% Similarity=0.145 Sum_probs=118.1
Q ss_pred CCceEEEeCCCCCcccccHHHHHHHhh-cc---ceEEee--cCCCC----CCCC---CCC--------CC-CChHHHHHH
Q 024228 44 KKHAVVLLHPFGFDGILTWQFQVLALA-KT---YEVYVP--DFLFF----GSSV---TDR--------PD-RTASFQAEC 101 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~~~~~~~~~~l~-~~---~~v~~~--d~~g~----G~s~---~~~--------~~-~~~~~~~~~ 101 (270)
...|.||+||++++.. .+..++..+. +. -.++.+ +--|+ |.-. ..+ .. .+....+..
T Consensus 10 ~~tPTifihG~~gt~~-s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~w 88 (255)
T PF06028_consen 10 STTPTIFIHGYGGTAN-SFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKW 88 (255)
T ss_dssp S-EEEEEE--TTGGCC-CCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHH
T ss_pred CCCcEEEECCCCCChh-HHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHH
Confidence 4578999999999999 9999999997 43 334333 33332 2211 111 11 245666777
Q ss_pred HHHHHHHh----CCCceEEEEEchhHHHHHHHHhhCcc-----ccccEEEecccCCCCchhhhHhhhhccchhhhhhccc
Q 024228 102 MAKGLRKL----GVEKCTLVGVSYGGMVGFKMAEMYPD-----LVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLP 172 (270)
Q Consensus 102 ~~~~l~~~----~~~~~~l~G~S~Gg~~a~~~a~~~p~-----~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (270)
+..++..| +.+++-+|||||||..++.++..+.. ++.++|.++++............ .......-..
T Consensus 89 l~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~~~~----~~~~~~~gp~ 164 (255)
T PF06028_consen 89 LKKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMNDDQN----QNDLNKNGPK 164 (255)
T ss_dssp HHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC-TT----TT-CSTT-BS
T ss_pred HHHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccccccccch----hhhhcccCCc
Confidence 77777765 67899999999999999999887532 58999999987654321111000 0000000001
Q ss_pred ccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcC------CCccCCHHHHHHHHHHhcC---CceEEEecC--CCc
Q 024228 173 KTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGE------NDKIFDMQVARNLKEQVGQ---NATMESIEK--AGH 241 (270)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~------~D~~~~~~~~~~~~~~~~~---~~~~~~~~~--~gH 241 (270)
.....+..+..... ...+.. +.+|-|.|. .|..||...+..+...+.+ ..+-.++.| +.|
T Consensus 165 ~~~~~y~~l~~~~~---~~~p~~------i~VLnI~G~~~~g~~sDG~V~~~Ss~sl~~L~~~~~~~Y~e~~v~G~~a~H 235 (255)
T PF06028_consen 165 SMTPMYQDLLKNRR---KNFPKN------IQVLNIYGDLEDGSNSDGIVPNASSLSLRYLLKNRAKSYQEKTVTGKDAQH 235 (255)
T ss_dssp S--HHHHHHHHTHG---GGSTTT-------EEEEEEEESBTTCSBTSSSBHHHHCTHHHHCTTTSSEEEEEEEESGGGSC
T ss_pred ccCHHHHHHHHHHH---hhCCCC------eEEEEEecccCCCCCCCeEEeHHHHHHHHHHhhcccCceEEEEEECCCCcc
Confidence 11223333333310 011111 679999998 8999999999888887752 244555654 688
Q ss_pred ceeecchHhHHHHHHHHH
Q 024228 242 LVNLERPFVYNRQLKTIL 259 (270)
Q Consensus 242 ~~~~~~~~~~~~~i~~fl 259 (270)
.-..++++ +.+.|.+||
T Consensus 236 S~LheN~~-V~~~I~~FL 252 (255)
T PF06028_consen 236 SQLHENPQ-VDKLIIQFL 252 (255)
T ss_dssp CGGGCCHH-HHHHHHHHH
T ss_pred ccCCCCHH-HHHHHHHHh
Confidence 88777765 779999998
No 118
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.45 E-value=7.1e-11 Score=84.42 Aligned_cols=224 Identities=14% Similarity=0.095 Sum_probs=136.3
Q ss_pred EEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc----ceEEeecCCCCCCCC---CC------CCCCChHHHHH
Q 024228 34 LNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT----YEVYVPDFLFFGSSV---TD------RPDRTASFQAE 100 (270)
Q Consensus 34 l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~----~~v~~~d~~g~G~s~---~~------~~~~~~~~~~~ 100 (270)
+.+|.......++.+++++|.+|... .|..++..|-+. ..++.+-.-||-.-+ .. ...++.++.++
T Consensus 18 ~~~~v~~~~~~~~li~~IpGNPG~~g-FY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~ 96 (301)
T KOG3975|consen 18 LKPWVTKSGEDKPLIVWIPGNPGLLG-FYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVD 96 (301)
T ss_pred eeeeeccCCCCceEEEEecCCCCchh-HHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHH
Confidence 34455444467889999999999999 999998877655 458888888876543 11 12367777788
Q ss_pred HHHHHHHHhC--CCceEEEEEchhHHHHHHHHhhCc--cccccEEEecccCCC-Cchhh----hHhhh----hccchhhh
Q 024228 101 CMAKGLRKLG--VEKCTLVGVSYGGMVGFKMAEMYP--DLVESMVVTCSVMGL-TESVS----NAALE----RIGYESWV 167 (270)
Q Consensus 101 ~~~~~l~~~~--~~~~~l~G~S~Gg~~a~~~a~~~p--~~v~~~i~~~~~~~~-~~~~~----~~~~~----~~~~~~~~ 167 (270)
--.++++..- ..+++++|||-|+++.+++..... -.|.+++++-|.... ..+.. ..... ........
T Consensus 97 HKlaFik~~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIerM~eSpnG~~~t~~l~~~~hv~~lt~yi 176 (301)
T KOG3975|consen 97 HKLAFIKEYVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIERMHESPNGIRLTKVLRYLPHVVSLTSYI 176 (301)
T ss_pred HHHHHHHHhCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHHHHhcCCCceEeeeeeeeehhhhheeeee
Confidence 7788887763 348999999999999999887432 247777776554311 10000 00000 00000000
Q ss_pred -hhccc---------------ccHHHHH---------HHHHhhhhcC-------CCChhhhhhhhheeeeEEEcCCCccC
Q 024228 168 -DFLLP---------------KTADALK---------VQFDIACYKL-------PTLPAFVYKHILEKIHLLWGENDKIF 215 (270)
Q Consensus 168 -~~~~~---------------~~~~~~~---------~~~~~~~~~~-------~~~~~~~~~~~~~P~l~i~g~~D~~~ 215 (270)
..+.+ .....+. .......+.. .....+.+++-.+-+.+.+|..|.+|
T Consensus 177 ~~~~lp~~ir~~Li~~~l~~~n~p~e~l~tal~l~h~~v~rn~v~la~qEm~eV~~~d~e~~een~d~l~Fyygt~DgW~ 256 (301)
T KOG3975|consen 177 YWILLPGFIRFILIKFMLCGSNGPQEFLSTALFLTHPQVVRNSVGLAAQEMEEVTTRDIEYCEENLDSLWFYYGTNDGWV 256 (301)
T ss_pred eeecChHHHHHHHHHHhcccCCCcHHHHhhHHHhhcHHHHHHHhhhchHHHHHHHHhHHHHHHhcCcEEEEEccCCCCCc
Confidence 00000 0000000 0000000000 00112223333378999999999999
Q ss_pred CHHHHHHHHHHhc-CCceEEEecCCCcceeecchHhHHHHHHHHH
Q 024228 216 DMQVARNLKEQVG-QNATMESIEKAGHLVNLERPFVYNRQLKTIL 259 (270)
Q Consensus 216 ~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 259 (270)
|.+....+.+.++ .+.++-+ ++..|.+...+.+..+..+.+.+
T Consensus 257 p~~~~d~~kdd~~eed~~Lde-dki~HAFV~~~~q~ma~~v~d~~ 300 (301)
T KOG3975|consen 257 PSHYYDYYKDDVPEEDLKLDE-DKIPHAFVVKHAQYMANAVFDMI 300 (301)
T ss_pred chHHHHHHhhhcchhceeecc-ccCCcceeecccHHHHHHHHHhh
Confidence 9999999999998 4556655 77899999988888888877765
No 119
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=99.44 E-value=3e-11 Score=98.09 Aligned_cols=125 Identities=16% Similarity=0.067 Sum_probs=87.1
Q ss_pred eEEEeecC---CeEEEEEecCC---CCCCceEEEeCCCCCcccccHHHHHH------------------HhhccceEEee
Q 024228 23 QRTIEIEP---GTILNIWVPKK---TTKKHAVVLLHPFGFDGILTWQFQVL------------------ALAKTYEVYVP 78 (270)
Q Consensus 23 ~~~i~~~~---g~~l~~~~~~~---~~~~~~vv~~hG~~~~~~~~~~~~~~------------------~l~~~~~v~~~ 78 (270)
.-++.+.+ +..++||...+ +.+.|.||+++|++|++. .+..+.+ .+.+..+++.+
T Consensus 49 sGy~~v~~~~~~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss-~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~~~~l~i 127 (462)
T PTZ00472 49 SGYFDIPGNQTDKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSS-MFALLAENGPCLMNETTGDIYNNTYSWNNEAYVIYV 127 (462)
T ss_pred eEEEEeCCCCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHH-HHhhhccCCCeEEeCCCCceeECCcccccccCeEEE
Confidence 45566643 56787765543 346799999999999886 5432210 12334789999
Q ss_pred cCC-CCCCCCCCCCC--CChHHHHHHHHHHHHHh-------CCCceEEEEEchhHHHHHHHHhhC----------ccccc
Q 024228 79 DFL-FFGSSVTDRPD--RTASFQAECMAKGLRKL-------GVEKCTLVGVSYGGMVGFKMAEMY----------PDLVE 138 (270)
Q Consensus 79 d~~-g~G~s~~~~~~--~~~~~~~~~~~~~l~~~-------~~~~~~l~G~S~Gg~~a~~~a~~~----------p~~v~ 138 (270)
|.| |+|.|...... .+.++.++|+.++++.+ ...+++|+|||+||.++..+|.+. .-.++
T Consensus 128 DqP~G~G~S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLk 207 (462)
T PTZ00472 128 DQPAGVGFSYADKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLA 207 (462)
T ss_pred eCCCCcCcccCCCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeE
Confidence 975 88888754332 45577888888888753 447899999999999988877652 11478
Q ss_pred cEEEecccCC
Q 024228 139 SMVVTCSVMG 148 (270)
Q Consensus 139 ~~i~~~~~~~ 148 (270)
++++-++...
T Consensus 208 Gi~IGNg~~d 217 (462)
T PTZ00472 208 GLAVGNGLTD 217 (462)
T ss_pred EEEEeccccC
Confidence 8888887654
No 120
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=99.44 E-value=5.7e-12 Score=88.66 Aligned_cols=181 Identities=16% Similarity=0.153 Sum_probs=122.6
Q ss_pred EecCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCC-CCCCCCC-CC-------CCCChHHHHHHHHHHH
Q 024228 37 WVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFL-FFGSSVT-DR-------PDRTASFQAECMAKGL 106 (270)
Q Consensus 37 ~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~-g~G~s~~-~~-------~~~~~~~~~~~~~~~l 106 (270)
|..++..++..||++--+.+.....-+..+..++.+ |.|+.+|+- |--.+.. .. ...+....-.++..++
T Consensus 31 Yv~gs~~~~~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~ 110 (242)
T KOG3043|consen 31 YVVGSTSSKKVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVV 110 (242)
T ss_pred EEecCCCCCeEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHH
Confidence 344554455677777776666553466778888888 999999974 3111211 00 1123333345566665
Q ss_pred HHh---C-CCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccHHHHHHHH
Q 024228 107 RKL---G-VEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQF 182 (270)
Q Consensus 107 ~~~---~-~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (270)
+.+ + ..++.++|.||||-++..+....| .+.+.+.+-|.....
T Consensus 111 k~lk~~g~~kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~hps~~d~-------------------------------- 157 (242)
T KOG3043|consen 111 KWLKNHGDSKKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFHPSFVDS-------------------------------- 157 (242)
T ss_pred HHHHHcCCcceeeEEEEeecceEEEEeeccch-hheeeeEecCCcCCh--------------------------------
Confidence 554 3 568999999999999998888877 588877776544311
Q ss_pred HhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCC----ceEEEecCCCcceee-----cch-----
Q 024228 183 DIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQN----ATMESIEKAGHLVNL-----ERP----- 248 (270)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~----~~~~~~~~~gH~~~~-----~~~----- 248 (270)
.......+|++++.|+.|.++|++....+.+.+..+ .++.+++|.+|-++. +.|
T Consensus 158 ------------~D~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~~ 225 (242)
T KOG3043|consen 158 ------------ADIANVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFVARRANISSPEDKKA 225 (242)
T ss_pred ------------hHHhcCCCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccchhhhhccCCCChhHHHH
Confidence 112223389999999999999999999998888733 369999999999873 233
Q ss_pred -HhHHHHHHHHHHhh
Q 024228 249 -FVYNRQLKTILASL 262 (270)
Q Consensus 249 -~~~~~~i~~fl~~~ 262 (270)
++..+.+.+|++..
T Consensus 226 ~eea~~~~~~Wf~~y 240 (242)
T KOG3043|consen 226 AEEAYQRFISWFKHY 240 (242)
T ss_pred HHHHHHHHHHHHHHh
Confidence 34556677777654
No 121
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=99.43 E-value=3.5e-11 Score=102.83 Aligned_cols=231 Identities=18% Similarity=0.118 Sum_probs=144.7
Q ss_pred cccCCceeEEEeecCCeEEEEEecCC-----CCCCceEEEeCCCCCccc--ccH-HHHHHH-hhcc-ceEEeecCCCCCC
Q 024228 16 LKLVGMTQRTIEIEPGTILNIWVPKK-----TTKKHAVVLLHPFGFDGI--LTW-QFQVLA-LAKT-YEVYVPDFLFFGS 85 (270)
Q Consensus 16 ~~~~~~~~~~i~~~~g~~l~~~~~~~-----~~~~~~vv~~hG~~~~~~--~~~-~~~~~~-l~~~-~~v~~~d~~g~G~ 85 (270)
...+.++...+.. +|....+....+ .+.-|.+|.+||++++.. ..| ..+... +... +.|+.+|.||.|.
T Consensus 493 ~~~p~~~~~~i~~-~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~~ 571 (755)
T KOG2100|consen 493 VALPIVEFGKIEI-DGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAVLQVDGRGSGG 571 (755)
T ss_pred ccCCcceeEEEEe-ccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHHhhccCCeEEEEEcCCCcCC
Confidence 4455667777777 788887754433 234578888999987332 011 112233 3444 9999999999876
Q ss_pred CCCCC--------CCCChHHHHHHHHHHHHH--hCCCceEEEEEchhHHHHHHHHhhCccc-cccEEEecccCCCCchhh
Q 024228 86 SVTDR--------PDRTASFQAECMAKGLRK--LGVEKCTLVGVSYGGMVGFKMAEMYPDL-VESMVVTCSVMGLTESVS 154 (270)
Q Consensus 86 s~~~~--------~~~~~~~~~~~~~~~l~~--~~~~~~~l~G~S~Gg~~a~~~a~~~p~~-v~~~i~~~~~~~~~~~~~ 154 (270)
..... +....++....+..+++. ++.+++.++|+|.||++++.++...|++ +++.+.++|+.... ...
T Consensus 572 ~G~~~~~~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~-~yd 650 (755)
T KOG2100|consen 572 YGWDFRSALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWL-YYD 650 (755)
T ss_pred cchhHHHHhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeee-eec
Confidence 65432 223444555555555554 3556899999999999999999999854 55559999987654 111
Q ss_pred hHhhhh-ccchhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhhee-eeEEEcCCCccCCHHHHHHHHHHhc---C
Q 024228 155 NAALER-IGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEK-IHLLWGENDKIFDMQVARNLKEQVG---Q 229 (270)
Q Consensus 155 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~i~g~~D~~~~~~~~~~~~~~~~---~ 229 (270)
.....+ ++. +...... +.. .........+..| .|++||+.|..|+.+.+..+.+.+. -
T Consensus 651 s~~terymg~--------p~~~~~~---y~e------~~~~~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv 713 (755)
T KOG2100|consen 651 STYTERYMGL--------PSENDKG---YEE------SSVSSPANNIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGV 713 (755)
T ss_pred ccccHhhcCC--------Cccccch---hhh------ccccchhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCC
Confidence 111111 110 0000000 000 0011112222244 4999999999999998888887775 2
Q ss_pred CceEEEecCCCcceeecc-hHhHHHHHHHHHHhhhhh
Q 024228 230 NATMESIEKAGHLVNLER-PFVYNRQLKTILASLVHA 265 (270)
Q Consensus 230 ~~~~~~~~~~gH~~~~~~-~~~~~~~i~~fl~~~~~~ 265 (270)
..++.++|+.+|.+.... -..+...+..|+..+...
T Consensus 714 ~~~~~vypde~H~is~~~~~~~~~~~~~~~~~~~~~~ 750 (755)
T KOG2100|consen 714 PFRLLVYPDENHGISYVEVISHLYEKLDRFLRDCFGS 750 (755)
T ss_pred ceEEEEeCCCCcccccccchHHHHHHHHHHHHHHcCc
Confidence 378999999999997644 356788999999866544
No 122
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=99.42 E-value=4.9e-12 Score=92.55 Aligned_cols=162 Identities=17% Similarity=0.109 Sum_probs=86.1
Q ss_pred CCceEEEeCCCCCcccccHHHH----HHHhhc-cceEEeecCCCC-----CCCCC------------CC-------C---
Q 024228 44 KKHAVVLLHPFGFDGILTWQFQ----VLALAK-TYEVYVPDFLFF-----GSSVT------------DR-------P--- 91 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~~~~~~~----~~~l~~-~~~v~~~d~~g~-----G~s~~------------~~-------~--- 91 (270)
.++-||++||++.++. .++.. ...|.+ .+.++.+|-|-- |-... +. .
T Consensus 3 ~k~riLcLHG~~~na~-if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~ 81 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAE-IFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDH 81 (212)
T ss_dssp ---EEEEE--TT--HH-HHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SG
T ss_pred CCceEEEeCCCCcCHH-HHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCcc
Confidence 4788999999999998 77654 456666 588888885521 11100 00 0
Q ss_pred -CCChHHHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhC--------ccccccEEEecccCCCCchhhhHhhhhcc
Q 024228 92 -DRTASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMY--------PDLVESMVVTCSVMGLTESVSNAALERIG 162 (270)
Q Consensus 92 -~~~~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~--------p~~v~~~i~~~~~~~~~~~~~~~~~~~~~ 162 (270)
...+++..+.+.++++..+. =..|+|+|.||.+|..++... ...++-+|++++........
T Consensus 82 ~~~~~~~sl~~l~~~i~~~GP-fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~~--------- 151 (212)
T PF03959_consen 82 EYEGLDESLDYLRDYIEENGP-FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPDY--------- 151 (212)
T ss_dssp GG---HHHHHHHHHHHHHH----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE-G---------
T ss_pred cccCHHHHHHHHHHHHHhcCC-eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchhh---------
Confidence 12234445555555555442 367999999999998888642 12478888888766532210
Q ss_pred chhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCC-ceEEEecCCCc
Q 024228 163 YESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQN-ATMESIEKAGH 241 (270)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~~gH 241 (270)
.... ....+.+|+|.|+|++|.+++++.++.+.+.+. + .+++..++ ||
T Consensus 152 -------------------------~~~~----~~~~i~iPtlHv~G~~D~~~~~~~s~~L~~~~~-~~~~v~~h~g-GH 200 (212)
T PF03959_consen 152 -------------------------QELY----DEPKISIPTLHVIGENDPVVPPERSEALAEMFD-PDARVIEHDG-GH 200 (212)
T ss_dssp -------------------------TTTT------TT---EEEEEEETT-SSS-HHHHHHHHHHHH-HHEEEEEESS-SS
T ss_pred -------------------------hhhh----ccccCCCCeEEEEeCCCCCcchHHHHHHHHhcc-CCcEEEEECC-CC
Confidence 0000 011223999999999999999999999999987 5 78888875 88
Q ss_pred ceeecc
Q 024228 242 LVNLER 247 (270)
Q Consensus 242 ~~~~~~ 247 (270)
.+....
T Consensus 201 ~vP~~~ 206 (212)
T PF03959_consen 201 HVPRKK 206 (212)
T ss_dssp S----H
T ss_pred cCcCCh
Confidence 886543
No 123
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.42 E-value=3e-11 Score=87.57 Aligned_cols=167 Identities=21% Similarity=0.153 Sum_probs=94.0
Q ss_pred CCceEEEeCCCCCcccccHHHH--HHHhhcc--ceEEeecCCCCCCCCC---------CCCCCChHHHHHHHHHHHHHh-
Q 024228 44 KKHAVVLLHPFGFDGILTWQFQ--VLALAKT--YEVYVPDFLFFGSSVT---------DRPDRTASFQAECMAKGLRKL- 109 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~~~~~~~--~~~l~~~--~~v~~~d~~g~G~s~~---------~~~~~~~~~~~~~~~~~l~~~- 109 (270)
+.|.||++||.+.+.. .+... ...++++ |.|+.++......... .....+...+...+..+.++.
T Consensus 15 ~~PLVv~LHG~~~~a~-~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~~~~ 93 (220)
T PF10503_consen 15 PVPLVVVLHGCGQSAE-DFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAARYN 93 (220)
T ss_pred CCCEEEEeCCCCCCHH-HHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhhhcc
Confidence 4689999999999887 55432 3456666 7888887542111000 001112222233333344443
Q ss_pred -CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccHHHHHHHHHhhhhc
Q 024228 110 -GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYK 188 (270)
Q Consensus 110 -~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (270)
+..+|++.|+|.||.++..++..+|+.+.++..+++...............+. .... ........... .
T Consensus 94 iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~~~~a~~~~~a~~~m~-----~g~~-~~p~~~~~a~~----~ 163 (220)
T PF10503_consen 94 IDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVPYGCAASGASALSAMR-----SGPR-PAPAAAWGARS----D 163 (220)
T ss_pred cCCCceeeEEECHHHHHHHHHHHhCCccceEEEeecccccccccCcccHHHHhh-----CCCC-CChHHHHHhhh----h
Confidence 45689999999999999999999999999988887664322111000000000 0000 00000000000 0
Q ss_pred CCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc
Q 024228 189 LPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG 228 (270)
Q Consensus 189 ~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~ 228 (270)
....+ ..|++++||+.|..|.+...+++.+.+.
T Consensus 164 ~g~~~-------~~P~~v~hG~~D~tV~~~n~~~~~~q~~ 196 (220)
T PF10503_consen 164 AGAYP-------GYPRIVFHGTADTTVNPQNADQLVAQWL 196 (220)
T ss_pred ccCCC-------CCCEEEEecCCCCccCcchHHHHHHHHH
Confidence 00011 1589999999999999887777766543
No 124
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=99.41 E-value=3e-12 Score=88.63 Aligned_cols=201 Identities=13% Similarity=0.127 Sum_probs=117.5
Q ss_pred ceeEEEeecCCeEEEEEecCCCCCCceEEEeCCCCC---cccccHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHH
Q 024228 21 MTQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGF---DGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASF 97 (270)
Q Consensus 21 ~~~~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~---~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~ 97 (270)
.+...+....|..-.+-.+++....+.+||+||+-- +...+....-..+...|+|..+++- .++ ...++++
T Consensus 43 ~r~e~l~Yg~~g~q~VDIwg~~~~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY~---l~~---q~htL~q 116 (270)
T KOG4627|consen 43 IRVEHLRYGEGGRQLVDIWGSTNQAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGYN---LCP---QVHTLEQ 116 (270)
T ss_pred cchhccccCCCCceEEEEecCCCCccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEeccC---cCc---ccccHHH
Confidence 334444443232223333444457899999999542 2221222223444444999988753 333 2234555
Q ss_pred HHHHHHH----HHHHhC-CCceEEEEEchhHHHHHHHHhhC-ccccccEEEecccCCCCchhhhHhhhhccchhhhhhcc
Q 024228 98 QAECMAK----GLRKLG-VEKCTLVGVSYGGMVGFKMAEMY-PDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLL 171 (270)
Q Consensus 98 ~~~~~~~----~l~~~~-~~~~~l~G~S~Gg~~a~~~a~~~-p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (270)
...++.. +++... .+.+.+-|||.|+.+|..+..+. ..+|.+++++++...............++....
T Consensus 117 t~~~~~~gv~filk~~~n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l~EL~~te~g~dlgLt~~----- 191 (270)
T KOG4627|consen 117 TMTQFTHGVNFILKYTENTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDLRELSNTESGNDLGLTER----- 191 (270)
T ss_pred HHHHHHHHHHHHHHhcccceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhhHHHHhCCccccccCcccc-----
Confidence 4444444 344443 34677889999999999887764 348999999988765432211111111111000
Q ss_pred cccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecc
Q 024228 172 PKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLER 247 (270)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 247 (270)
.. +. ....-..+.....|+|++.+++|.---.++.+.+...+. .+++..+++.+|+-.+++
T Consensus 192 --~a----e~--------~Scdl~~~~~v~~~ilVv~~~~espklieQnrdf~~q~~-~a~~~~f~n~~hy~I~~~ 252 (270)
T KOG4627|consen 192 --NA----ES--------VSCDLWEYTDVTVWILVVAAEHESPKLIEQNRDFADQLR-KASFTLFKNYDHYDIIEE 252 (270)
T ss_pred --hh----hh--------cCccHHHhcCceeeeeEeeecccCcHHHHhhhhHHHHhh-hcceeecCCcchhhHHHH
Confidence 00 00 001112234444899999999997655678888888887 799999999999987754
No 125
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.39 E-value=5.6e-11 Score=87.93 Aligned_cols=100 Identities=21% Similarity=0.250 Sum_probs=86.1
Q ss_pred ceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhC-CCceEEEEEchhHH
Q 024228 46 HAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLG-VEKCTLVGVSYGGM 124 (270)
Q Consensus 46 ~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~l~G~S~Gg~ 124 (270)
|+++++|+.+|... .|..+...|.....|+.++.||.+.. .....+++++++...+.|.... ..++.|+|||+||.
T Consensus 1 ~pLF~fhp~~G~~~-~~~~L~~~l~~~~~v~~l~a~g~~~~--~~~~~~l~~~a~~yv~~Ir~~QP~GPy~L~G~S~GG~ 77 (257)
T COG3319 1 PPLFCFHPAGGSVL-AYAPLAAALGPLLPVYGLQAPGYGAG--EQPFASLDDMAAAYVAAIRRVQPEGPYVLLGWSLGGA 77 (257)
T ss_pred CCEEEEcCCCCcHH-HHHHHHHHhccCceeeccccCccccc--ccccCCHHHHHHHHHHHHHHhCCCCCEEEEeeccccH
Confidence 58999999999998 99999999999999999999999862 3344789999998888888775 45999999999999
Q ss_pred HHHHHHhhC---ccccccEEEecccCC
Q 024228 125 VGFKMAEMY---PDLVESMVVTCSVMG 148 (270)
Q Consensus 125 ~a~~~a~~~---p~~v~~~i~~~~~~~ 148 (270)
+|..+|.+. .+.|..++++++...
T Consensus 78 vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 78 VAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred HHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 999999864 346999999998877
No 126
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=99.39 E-value=1e-12 Score=100.65 Aligned_cols=129 Identities=25% Similarity=0.251 Sum_probs=70.6
Q ss_pred CCceeEEE--eecCCeEEE--EEecCC-CCCCceEEEeCCCCCcccc---c----------H----HHHHHHhhcc-ceE
Q 024228 19 VGMTQRTI--EIEPGTILN--IWVPKK-TTKKHAVVLLHPFGFDGIL---T----------W----QFQVLALAKT-YEV 75 (270)
Q Consensus 19 ~~~~~~~i--~~~~g~~l~--~~~~~~-~~~~~~vv~~hG~~~~~~~---~----------~----~~~~~~l~~~-~~v 75 (270)
.+.+.+++ .+.++..+. +.++.+ .++-|+||++||-++..+. . + ..+...|+++ |-|
T Consensus 84 dGY~~EKv~f~~~p~~~vpaylLvPd~~~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVv 163 (390)
T PF12715_consen 84 DGYTREKVEFNTTPGSRVPAYLLVPDGAKGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVV 163 (390)
T ss_dssp TTEEEEEEEE--STTB-EEEEEEEETT--S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEE
T ss_pred CCeEEEEEEEEccCCeeEEEEEEecCCCCCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEE
Confidence 34444443 344666554 345555 4567899999997765430 0 1 1246778888 999
Q ss_pred EeecCCCCCCCCCCCCC-----CChHHH---------------HHHHHHHHHHh------CCCceEEEEEchhHHHHHHH
Q 024228 76 YVPDFLFFGSSVTDRPD-----RTASFQ---------------AECMAKGLRKL------GVEKCTLVGVSYGGMVGFKM 129 (270)
Q Consensus 76 ~~~d~~g~G~s~~~~~~-----~~~~~~---------------~~~~~~~l~~~------~~~~~~l~G~S~Gg~~a~~~ 129 (270)
+++|.+|+|+....... .+...+ +-|....++.+ +.++|.++|+||||..++.+
T Consensus 164 la~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~L 243 (390)
T PF12715_consen 164 LAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWL 243 (390)
T ss_dssp EEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHH
T ss_pred EEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHH
Confidence 99999999987654321 121222 12223344444 34689999999999999999
Q ss_pred HhhCccccccEEEecccCC
Q 024228 130 AEMYPDLVESMVVTCSVMG 148 (270)
Q Consensus 130 a~~~p~~v~~~i~~~~~~~ 148 (270)
|+.. ++|++.|..+....
T Consensus 244 aALD-dRIka~v~~~~l~~ 261 (390)
T PF12715_consen 244 AALD-DRIKATVANGYLCT 261 (390)
T ss_dssp HHH--TT--EEEEES-B--
T ss_pred HHcc-hhhHhHhhhhhhhc
Confidence 9987 47998888765543
No 127
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=99.38 E-value=7.6e-11 Score=83.07 Aligned_cols=176 Identities=19% Similarity=0.206 Sum_probs=111.4
Q ss_pred CCceEEEeCCCCCcccccHHH----HHHHhhccceEEeecCCCC----CCCCCCC-------------------------
Q 024228 44 KKHAVVLLHPFGFDGILTWQF----QVLALAKTYEVYVPDFLFF----GSSVTDR------------------------- 90 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~~~~~~----~~~~l~~~~~v~~~d~~g~----G~s~~~~------------------------- 90 (270)
.++-|||+||+-.+.. .|.. +...+.+.+.++.+|-|-- +.+....
T Consensus 4 ~k~rvLcLHGfrQsg~-~F~~Ktg~~rK~l~k~~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~~~ 82 (230)
T KOG2551|consen 4 KKLRVLCLHGFRQSGK-VFSEKTGSLRKLLKKLAELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEASF 82 (230)
T ss_pred CCceEEEecchhhccH-HHHHHhhhHHHHHHhhheEEecCCCccCCcccCCcccccccccCCcccccchhhhhccccccc
Confidence 4678999999999888 6654 3344555588888887620 1110000
Q ss_pred -CCCChHHHHHHHHHHHHHhCCCce-EEEEEchhHHHHHHHHhhCc------c--ccccEEEecccCCCCchhhhHhhhh
Q 024228 91 -PDRTASFQAECMAKGLRKLGVEKC-TLVGVSYGGMVGFKMAEMYP------D--LVESMVVTCSVMGLTESVSNAALER 160 (270)
Q Consensus 91 -~~~~~~~~~~~~~~~l~~~~~~~~-~l~G~S~Gg~~a~~~a~~~p------~--~v~~~i~~~~~~~~~~~~~~~~~~~ 160 (270)
.....+...+-+.+.+.+.| ++ .|+|+|.|+.++..++.... . .++-+|++++.........
T Consensus 83 ~~~~~~eesl~yl~~~i~enG--PFDGllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~~~~~~------ 154 (230)
T KOG2551|consen 83 TEYFGFEESLEYLEDYIKENG--PFDGLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFPSKKLD------ 154 (230)
T ss_pred ccccChHHHHHHHHHHHHHhC--CCccccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCCcchhh------
Confidence 00122333444555555543 54 69999999999988887211 1 2567777776544221000
Q ss_pred ccchhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCC
Q 024228 161 IGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAG 240 (270)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~g 240 (270)
.......+.+|.|.|.|+.|.++|...+..+++.+. +..+...+| |
T Consensus 155 --------------------------------~~~~~~~i~~PSLHi~G~~D~iv~~~~s~~L~~~~~-~a~vl~Hpg-g 200 (230)
T KOG2551|consen 155 --------------------------------ESAYKRPLSTPSLHIFGETDTIVPSERSEQLAESFK-DATVLEHPG-G 200 (230)
T ss_pred --------------------------------hhhhccCCCCCeeEEecccceeecchHHHHHHHhcC-CCeEEecCC-C
Confidence 000122333999999999999999999999999998 777777774 9
Q ss_pred cceeecchHhHHHHHHHHHHhhhh
Q 024228 241 HLVNLERPFVYNRQLKTILASLVH 264 (270)
Q Consensus 241 H~~~~~~~~~~~~~i~~fl~~~~~ 264 (270)
|...... .+.+.|.+|++....
T Consensus 201 H~VP~~~--~~~~~i~~fi~~~~~ 222 (230)
T KOG2551|consen 201 HIVPNKA--KYKEKIADFIQSFLQ 222 (230)
T ss_pred ccCCCch--HHHHHHHHHHHHHHH
Confidence 9987544 455666666665544
No 128
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.35 E-value=1.8e-11 Score=88.26 Aligned_cols=179 Identities=17% Similarity=0.225 Sum_probs=111.4
Q ss_pred EEEEEecCCCCCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCC---CChHHHHHHHHHHHHH
Q 024228 33 ILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPD---RTASFQAECMAKGLRK 108 (270)
Q Consensus 33 ~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~---~~~~~~~~~~~~~l~~ 108 (270)
.+-...+...+.-|.|+|+||+..... .|..+..+++.+ |-|+++++-..-. +... .+....++++..-+.+
T Consensus 34 pLlI~tP~~~G~yPVilF~HG~~l~ns-~Ys~lL~HIASHGfIVVAPQl~~~~~---p~~~~Ei~~aa~V~~WL~~gL~~ 109 (307)
T PF07224_consen 34 PLLIVTPSEAGTYPVILFLHGFNLYNS-FYSQLLAHIASHGFIVVAPQLYTLFP---PDGQDEIKSAASVINWLPEGLQH 109 (307)
T ss_pred CeEEecCCcCCCccEEEEeechhhhhH-HHHHHHHHHhhcCeEEEechhhcccC---CCchHHHHHHHHHHHHHHhhhhh
Confidence 455555655566799999999998888 999999999999 9999999864211 1111 1222233333333333
Q ss_pred h-------CCCceEEEEEchhHHHHHHHHhhCc--cccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccHHHHH
Q 024228 109 L-------GVEKCTLVGVSYGGMVGFKMAEMYP--DLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALK 179 (270)
Q Consensus 109 ~-------~~~~~~l~G~S~Gg~~a~~~a~~~p--~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (270)
+ +..++.++|||.||-.|..+|..+. -.++++|-++|.......... .+...
T Consensus 110 ~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G~~k~~~t---------------~P~iL---- 170 (307)
T PF07224_consen 110 VLPENVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAGTSKGKQT---------------PPPIL---- 170 (307)
T ss_pred hCCCCcccccceEEEeecCCccHHHHHHHhcccccCchhheecccccCCCCCCCCC---------------CCCee----
Confidence 2 3458999999999999999988763 258899999988654321100 00000
Q ss_pred HHHHhhhhcCCCChhhhhhhhheeeeEEEcCCC----ccCC---HH--HHHHHHHHhcCCceEEEecCCCcceeec
Q 024228 180 VQFDIACYKLPTLPAFVYKHILEKIHLLWGEND----KIFD---MQ--VARNLKEQVGQNATMESIEKAGHLVNLE 246 (270)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D----~~~~---~~--~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 246 (270)
.+. +. .-++.+|+++|-+.-- ...| +. .-+++++..++.+-..+..+.||+.+++
T Consensus 171 ------ty~----p~--SF~l~iPv~VIGtGLg~~~~~~~~~CaP~gvnH~eFf~eCk~p~~hfV~~dYGHmDmLD 234 (307)
T PF07224_consen 171 ------TYV----PQ--SFDLDIPVLVIGTGLGPKRNPLFPPCAPDGVNHEEFFNECKPPCAHFVAKDYGHMDMLD 234 (307)
T ss_pred ------ecC----Cc--ccccCCceEEEecCcCccccCCCCCCCCCCcCHHHHHHhhcccceeeeecccccccccc
Confidence 000 00 0122278988865443 1211 22 3456777766566666777889999874
No 129
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=99.35 E-value=1e-11 Score=90.74 Aligned_cols=164 Identities=18% Similarity=0.209 Sum_probs=79.3
Q ss_pred HHHHHHHHHHh---CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHh-----hhhccchhhhh-h
Q 024228 99 AECMAKGLRKL---GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAA-----LERIGYESWVD-F 169 (270)
Q Consensus 99 ~~~~~~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~-----~~~~~~~~~~~-~ 169 (270)
.+...+++... +.++|.|+|.|.||-+|+.+|..+| .|+++|.++|............ ........... .
T Consensus 6 fe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~~~~~~~~~~~~~~~lp~~~~~~~~~~~ 84 (213)
T PF08840_consen 6 FEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSVVFQGIGFYRDSSKPLPYLPFDISKFSW 84 (213)
T ss_dssp HHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB--SSEEEETTE--EE----B-GGG-EE
T ss_pred HHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCceeEecchhcccCCCccCCcCCcChhhcee
Confidence 34444455443 3368999999999999999999999 6999999988754322111000 00000000000 0
Q ss_pred cccccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHH-HHHHHHHhc-----CCceEEEecCCCcce
Q 024228 170 LLPKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQV-ARNLKEQVG-----QNATMESIEKAGHLV 243 (270)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~-~~~~~~~~~-----~~~~~~~~~~~gH~~ 243 (270)
.......... ..............--+.++.+|+|+|.|++|...|... ++.+.+++. .+.+++.++++||.+
T Consensus 85 ~~~~~~~~~~-~~~~~~~~~~~~a~IpvE~i~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~~~~~~~l~Y~~aGH~i 163 (213)
T PF08840_consen 85 NEPGLLRSRY-AFELADDKAVEEARIPVEKIKGPILLISGEDDQIWPSSEMAEQIEERLKAAGFPHNVEHLSYPGAGHLI 163 (213)
T ss_dssp -TTS-EE-TT--B--TTTGGGCCCB--GGG--SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT-----EEEEETTB-S--
T ss_pred cCCcceehhh-hhhcccccccccccccHHHcCCCEEEEEeCCCCccchHHHHHHHHHHHHHhCCCCcceEEEcCCCCcee
Confidence 0000000000 000000000000111245556999999999999998654 445555554 146888899999996
Q ss_pred eec----------------------------chHhHHHHHHHHHHhhhh
Q 024228 244 NLE----------------------------RPFVYNRQLKTILASLVH 264 (270)
Q Consensus 244 ~~~----------------------------~~~~~~~~i~~fl~~~~~ 264 (270)
... ..++.+..+.+||+++..
T Consensus 164 ~~Py~P~~~~~~~~~~~~~~~~GG~~~~~a~A~~dsW~~~l~Fl~~~L~ 212 (213)
T PF08840_consen 164 EPPYFPHCRASYHKFIGTPLAWGGEPEAHAKAQEDSWKKILEFLRKHLG 212 (213)
T ss_dssp -STT-----EEEETTTTEEEE--B-HHHHHHHHHHHHHHHHHHHHHH--
T ss_pred cCCCCCCcccccccccCCcccCCCChHHHHHHHHHHHHHHHHHHHHHhC
Confidence 310 123467788899987754
No 130
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=99.34 E-value=6.6e-11 Score=95.34 Aligned_cols=223 Identities=15% Similarity=0.104 Sum_probs=137.8
Q ss_pred EEEeecCCeEEEEEecCCC-----CCCceEEEeCCCCCccc--ccH--HHH--HHHhhcc-ceEEeecCCCCCCCCCC--
Q 024228 24 RTIEIEPGTILNIWVPKKT-----TKKHAVVLLHPFGFDGI--LTW--QFQ--VLALAKT-YEVYVPDFLFFGSSVTD-- 89 (270)
Q Consensus 24 ~~i~~~~g~~l~~~~~~~~-----~~~~~vv~~hG~~~~~~--~~~--~~~--~~~l~~~-~~v~~~d~~g~G~s~~~-- 89 (270)
..++...|..++-....+. ++-|+++++-|+++-.- ..| ... ...|+.. |.|+++|-||.-.....
T Consensus 616 f~fqs~tg~~lYgmiyKPhn~~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlkFE 695 (867)
T KOG2281|consen 616 FSFQSKTGLTLYGMIYKPHNFQPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLKFE 695 (867)
T ss_pred eeeecCCCcEEEEEEEccccCCCCCCCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchhhH
Confidence 4446656777764333321 34689999999886433 112 111 2456666 99999999987554322
Q ss_pred ------CCCCChHHHHHHHHHHHHHh---CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhh
Q 024228 90 ------RPDRTASFQAECMAKGLRKL---GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALER 160 (270)
Q Consensus 90 ------~~~~~~~~~~~~~~~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~ 160 (270)
.+....++.++-+.-+.++. +.+++.+-|+|+||++++....++|+-++..|.-+|...+.........+.
T Consensus 696 ~~ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapVT~W~~YDTgYTERY 775 (867)
T KOG2281|consen 696 SHIKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVTDWRLYDTGYTERY 775 (867)
T ss_pred HHHhhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcceeeEEeccCcceeeeeecccchhhh
Confidence 13356677777777777776 467999999999999999999999997787777666654322111111112
Q ss_pred ccchhhhh-hcccccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc---CCceEEEe
Q 024228 161 IGYESWVD-FLLPKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG---QNATMESI 236 (270)
Q Consensus 161 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~ 236 (270)
++...... .... ......... .+++ ....|++||--|.-|.......+.+.+- +..+++++
T Consensus 776 Mg~P~~nE~gY~a---gSV~~~Vek-------lpde-----pnRLlLvHGliDENVHF~Hts~Lvs~lvkagKpyeL~If 840 (867)
T KOG2281|consen 776 MGYPDNNEHGYGA---GSVAGHVEK-------LPDE-----PNRLLLVHGLIDENVHFAHTSRLVSALVKAGKPYELQIF 840 (867)
T ss_pred cCCCccchhcccc---hhHHHHHhh-------CCCC-----CceEEEEecccccchhhhhHHHHHHHHHhCCCceEEEEc
Confidence 22111000 0000 000000000 0100 0358999999999998877777666543 46799999
Q ss_pred cCCCcceee-cchHhHHHHHHHHHHh
Q 024228 237 EKAGHLVNL-ERPFVYNRQLKTILAS 261 (270)
Q Consensus 237 ~~~gH~~~~-~~~~~~~~~i~~fl~~ 261 (270)
|+-.|.+-. +...-+...+..|+++
T Consensus 841 P~ERHsiR~~es~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 841 PNERHSIRNPESGIYYEARLLHFLQE 866 (867)
T ss_pred cccccccCCCccchhHHHHHHHHHhh
Confidence 999999865 4445566778888865
No 131
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=99.33 E-value=3.1e-11 Score=88.71 Aligned_cols=106 Identities=21% Similarity=0.176 Sum_probs=71.7
Q ss_pred CCceEEEeCCCCCcccccHHHHHHHhh--------c-cceEEeecCCCCCCCCCCC-CCCChHHHHHHHHHHHHHh----
Q 024228 44 KKHAVVLLHPFGFDGILTWQFQVLALA--------K-TYEVYVPDFLFFGSSVTDR-PDRTASFQAECMAKGLRKL---- 109 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~~~~~~~~~~l~--------~-~~~v~~~d~~g~G~s~~~~-~~~~~~~~~~~~~~~l~~~---- 109 (270)
.+.+|||+||.+++.. .++.+...+. . .++++++|+......-... -....+...+.+..+++.+
T Consensus 3 ~g~pVlFIhG~~Gs~~-q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g~~l~~q~~~~~~~i~~i~~~~~~~~ 81 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYK-QVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFHGRTLQRQAEFLAEAIKYILELYKSNR 81 (225)
T ss_pred CCCEEEEECcCCCCHh-HHHHHHHHHhhhhhhccCccceeEEEeccCccccccccccHHHHHHHHHHHHHHHHHhhhhcc
Confidence 4789999999999888 8887765552 1 2788999987542111110 0112233344455555555
Q ss_pred -CCCceEEEEEchhHHHHHHHHhhCc---cccccEEEecccCCCC
Q 024228 110 -GVEKCTLVGVSYGGMVGFKMAEMYP---DLVESMVVTCSVMGLT 150 (270)
Q Consensus 110 -~~~~~~l~G~S~Gg~~a~~~a~~~p---~~v~~~i~~~~~~~~~ 150 (270)
+.++++|+||||||.+|..++...+ +.|+.+|.++++...+
T Consensus 82 ~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~g~ 126 (225)
T PF07819_consen 82 PPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHRGS 126 (225)
T ss_pred CCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCCCc
Confidence 4568999999999999988876543 4799999998876544
No 132
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=99.32 E-value=3.6e-11 Score=83.54 Aligned_cols=178 Identities=17% Similarity=0.103 Sum_probs=111.7
Q ss_pred ceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHh----CCCceEEEEEc
Q 024228 46 HAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKL----GVEKCTLVGVS 120 (270)
Q Consensus 46 ~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~l~G~S 120 (270)
..+|++.|=++-.. .=..++..|+++ +.|+.+|-+-+-.+ ..++++.+.|+.+++++. +.++++|+|+|
T Consensus 3 t~~v~~SGDgGw~~-~d~~~a~~l~~~G~~VvGvdsl~Yfw~-----~rtP~~~a~Dl~~~i~~y~~~w~~~~vvLiGYS 76 (192)
T PF06057_consen 3 TLAVFFSGDGGWRD-LDKQIAEALAKQGVPVVGVDSLRYFWS-----ERTPEQTAADLARIIRHYRARWGRKRVVLIGYS 76 (192)
T ss_pred EEEEEEeCCCCchh-hhHHHHHHHHHCCCeEEEechHHHHhh-----hCCHHHHHHHHHHHHHHHHHHhCCceEEEEeec
Confidence 45677777555444 445678999988 99999997644333 357788888888887765 67899999999
Q ss_pred hhHHHHHHHHhhCcc----ccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccHHHHHHHHHhhhhcCCCChhhh
Q 024228 121 YGGMVGFKMAEMYPD----LVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFV 196 (270)
Q Consensus 121 ~Gg~~a~~~a~~~p~----~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (270)
+|+-+.-....+.|. +|+.++++++.....-..... .++..............
T Consensus 77 FGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~~~dFeihv~-----------------------~wlg~~~~~~~~~~~pe 133 (192)
T PF06057_consen 77 FGADVLPFIYNRLPAALRARVAQVVLLSPSTTADFEIHVS-----------------------GWLGMGGDDAAYPVIPE 133 (192)
T ss_pred CCchhHHHHHhhCCHHHHhheeEEEEeccCCcceEEEEhh-----------------------hhcCCCCCcccCCchHH
Confidence 999888877777764 789999998765432111100 00000000000011111
Q ss_pred hhhhh-eeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHH
Q 024228 197 YKHIL-EKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILA 260 (270)
Q Consensus 197 ~~~~~-~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 260 (270)
++++. .|++.|+|+++.-.. +..+. . ++.+.+.+|| ||.+- ++.+.+++.|.+-++
T Consensus 134 i~~l~~~~v~CiyG~~E~d~~---cp~l~--~-~~~~~i~lpG-gHHfd-~dy~~La~~Il~~l~ 190 (192)
T PF06057_consen 134 IAKLPPAPVQCIYGEDEDDSL---CPSLR--Q-PGVEVIALPG-GHHFD-GDYDALAKRILDALK 190 (192)
T ss_pred HHhCCCCeEEEEEcCCCCCCc---Ccccc--C-CCcEEEEcCC-CcCCC-CCHHHHHHHHHHHHh
Confidence 22222 689999998775421 11111 1 3789999997 67663 556667777776665
No 133
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=99.31 E-value=4.4e-11 Score=94.53 Aligned_cols=157 Identities=16% Similarity=0.131 Sum_probs=82.5
Q ss_pred CCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCC-CCC-----CC-----C-------C------CCC-ChH
Q 024228 43 TKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFF-GSS-----VT-----D-------R------PDR-TAS 96 (270)
Q Consensus 43 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~-G~s-----~~-----~-------~------~~~-~~~ 96 (270)
..-|+|||.||++++.. .|..++..|+.+ |-|+++|+|.. +-. +. . . ... ..+
T Consensus 98 ~~~PvvIFSHGlgg~R~-~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSRT-SYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEE 176 (379)
T ss_dssp S-EEEEEEE--TT--TT-TTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGG
T ss_pred CCCCEEEEeCCCCcchh-hHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchh
Confidence 34699999999999999 999999999999 99999999942 110 00 0 0 000 000
Q ss_pred ----------HHHHHHHHHHHHh--------------------------CCCceEEEEEchhHHHHHHHHhhCccccccE
Q 024228 97 ----------FQAECMAKGLRKL--------------------------GVEKCTLVGVSYGGMVGFKMAEMYPDLVESM 140 (270)
Q Consensus 97 ----------~~~~~~~~~l~~~--------------------------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~ 140 (270)
.-+.++..+++.+ +.++++++|||+||..++.++.+. .++++.
T Consensus 177 ~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r~~~~ 255 (379)
T PF03403_consen 177 EFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TRFKAG 255 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT--EE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cCcceE
Confidence 1123333333222 134689999999999999888876 579999
Q ss_pred EEecccCCCCchhhhHhhhhccchhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHH
Q 024228 141 VVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVA 220 (270)
Q Consensus 141 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~ 220 (270)
|+++++..+-.. .....+..|+|+|.++. +...+..
T Consensus 256 I~LD~W~~Pl~~------------------------------------------~~~~~i~~P~L~InSe~--f~~~~~~ 291 (379)
T PF03403_consen 256 ILLDPWMFPLGD------------------------------------------EIYSKIPQPLLFINSES--FQWWENI 291 (379)
T ss_dssp EEES---TTS-G------------------------------------------GGGGG--S-EEEEEETT--T--HHHH
T ss_pred EEeCCcccCCCc------------------------------------------ccccCCCCCEEEEECcc--cCChhhH
Confidence 999987542110 00112227999998875 2233333
Q ss_pred HHHHHHhc--CCceEEEecCCCcceee
Q 024228 221 RNLKEQVG--QNATMESIEKAGHLVNL 245 (270)
Q Consensus 221 ~~~~~~~~--~~~~~~~~~~~gH~~~~ 245 (270)
..+.+... ....+..+.|+.|..+-
T Consensus 292 ~~~~~~~~~~~~~~~~ti~gt~H~s~s 318 (379)
T PF03403_consen 292 FRMKKVISNNKESRMLTIKGTAHLSFS 318 (379)
T ss_dssp HHHHTT--TTS-EEEEEETT--GGGGS
T ss_pred HHHHHHhccCCCcEEEEECCCcCCCcc
Confidence 33333221 36788999999998643
No 134
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.31 E-value=8.1e-11 Score=82.35 Aligned_cols=174 Identities=16% Similarity=0.189 Sum_probs=113.0
Q ss_pred CceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCC--------C----------CCCCCChHHHHHHHHHH
Q 024228 45 KHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSV--------T----------DRPDRTASFQAECMAKG 105 (270)
Q Consensus 45 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~--------~----------~~~~~~~~~~~~~~~~~ 105 (270)
..+||++||.+.+.. .|..+++.|.-. ...+++.-|-.-.+. . ..........++.+..+
T Consensus 3 ~atIi~LHglGDsg~-~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~L 81 (206)
T KOG2112|consen 3 TATIIFLHGLGDSGS-GWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANL 81 (206)
T ss_pred eEEEEEEecCCCCCc-cHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHH
Confidence 357999999999999 998888777655 777777544221110 0 00112233335555566
Q ss_pred HHHh-----CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccHHHHHH
Q 024228 106 LRKL-----GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKV 180 (270)
Q Consensus 106 l~~~-----~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (270)
++.. ...++.+-|.|+||.+++..+..+|..+.+.....+..+..........
T Consensus 82 i~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p~~~~~~~~~~---------------------- 139 (206)
T KOG2112|consen 82 IDNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLPRASIGLPGWL---------------------- 139 (206)
T ss_pred HHHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccccccchhhccCCc----------------------
Confidence 6553 3457899999999999999999998878887776665442111110000
Q ss_pred HHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc---CCceEEEecCCCcceeecchHhHHHHHHH
Q 024228 181 QFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG---QNATMESIEKAGHLVNLERPFVYNRQLKT 257 (270)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~~~~~~~~~~~~i~~ 257 (270)
+... ..|++..||+.|++||....+...+.+. ..++++.++|.+|...- +++ +.+..
T Consensus 140 ------------~~~~----~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~~~~f~~y~g~~h~~~~---~e~-~~~~~ 199 (206)
T KOG2112|consen 140 ------------PGVN----YTPILLCHGTADPLVPFRFGEKSAQFLKSLGVRVTFKPYPGLGHSTSP---QEL-DDLKS 199 (206)
T ss_pred ------------cccC----cchhheecccCCceeehHHHHHHHHHHHHcCCceeeeecCCccccccH---HHH-HHHHH
Confidence 0000 2799999999999999876666555543 24789999999997753 333 45566
Q ss_pred HHHh
Q 024228 258 ILAS 261 (270)
Q Consensus 258 fl~~ 261 (270)
|+.+
T Consensus 200 ~~~~ 203 (206)
T KOG2112|consen 200 WIKT 203 (206)
T ss_pred HHHH
Confidence 6654
No 135
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=99.29 E-value=1.1e-10 Score=90.13 Aligned_cols=103 Identities=15% Similarity=0.158 Sum_probs=76.8
Q ss_pred CCceEEEeCCCCCcccccH-----HHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHH-----HHHHHHHHHhCCC
Q 024228 44 KKHAVVLLHPFGFDGILTW-----QFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQA-----ECMAKGLRKLGVE 112 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~~~~-----~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~-----~~~~~~l~~~~~~ 112 (270)
-+++++++|.+-.... .| ..++..|.++ ..|+.+++++-..+.. ..++++++ +.+..+.+..+.+
T Consensus 106 ~~~PlLiVpP~iNk~y-i~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~---~~~~edYi~e~l~~aid~v~~itg~~ 181 (445)
T COG3243 106 LKRPLLIVPPWINKFY-ILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLA---AKNLEDYILEGLSEAIDTVKDITGQK 181 (445)
T ss_pred CCCceEeeccccCcee-EEeCCCCccHHHHHHHcCCceEEEeccCchHhhh---hccHHHHHHHHHHHHHHHHHHHhCcc
Confidence 4678999999876555 44 2466777777 9999999986555543 34455554 4445555556778
Q ss_pred ceEEEEEchhHHHHHHHHhhCccc-cccEEEecccCCCC
Q 024228 113 KCTLVGVSYGGMVGFKMAEMYPDL-VESMVVTCSVMGLT 150 (270)
Q Consensus 113 ~~~l~G~S~Gg~~a~~~a~~~p~~-v~~~i~~~~~~~~~ 150 (270)
++.++|+|.||.++..+++.++.+ |+.++++.+..++.
T Consensus 182 ~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~ 220 (445)
T COG3243 182 DINLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFS 220 (445)
T ss_pred ccceeeEecchHHHHHHHHhhhhcccccceeeecchhhc
Confidence 999999999999999999988877 99999988776554
No 136
>PRK04940 hypothetical protein; Provisional
Probab=99.27 E-value=1e-09 Score=76.27 Aligned_cols=170 Identities=15% Similarity=0.131 Sum_probs=96.0
Q ss_pred EEEeCCCCCccccc--HHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhC----CCceEEEEEch
Q 024228 48 VVLLHPFGFDGILT--WQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLG----VEKCTLVGVSY 121 (270)
Q Consensus 48 vv~~hG~~~~~~~~--~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~----~~~~~l~G~S~ 121 (270)
||++||+.+++. . .. ++.+. .+.+|.+-.-.+ ...+....+.+.+.+..+. .+++.|+|+|+
T Consensus 2 IlYlHGF~SS~~-S~~~K--a~~l~----~~~p~~~~~~l~-----~~~P~~a~~~l~~~i~~~~~~~~~~~~~liGSSL 69 (180)
T PRK04940 2 IIYLHGFDSTSP-GNHEK--VLQLQ----FIDPDVRLISYS-----TLHPKHDMQHLLKEVDKMLQLSDDERPLICGVGL 69 (180)
T ss_pred EEEeCCCCCCCC-ccHHH--HHhhe----eeCCCCeEEECC-----CCCHHHHHHHHHHHHHHhhhccCCCCcEEEEeCh
Confidence 789999999888 4 32 11221 112222211001 1233443444555554321 15799999999
Q ss_pred hHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhh
Q 024228 122 GGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHIL 201 (270)
Q Consensus 122 Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (270)
||+.|..+|.++. + ..|+++|...+........ +.... ...-....+.++. ..-.
T Consensus 70 GGyyA~~La~~~g--~-~aVLiNPAv~P~~~L~~~i----g~~~~---y~~~~~~h~~eL~---------------~~~p 124 (180)
T PRK04940 70 GGYWAERIGFLCG--I-RQVIFNPNLFPEENMEGKI----DRPEE---YADIATKCVTNFR---------------EKNR 124 (180)
T ss_pred HHHHHHHHHHHHC--C-CEEEECCCCChHHHHHHHh----CCCcc---hhhhhHHHHHHhh---------------hcCc
Confidence 9999999999975 4 5588898876533221111 10000 0000000011110 0001
Q ss_pred eeeeEEEcCCCccCCHHHHHHHHHHhcCCc-eEEEecCCCcceeecchHhHHHHHHHHHH
Q 024228 202 EKIHLLWGENDKIFDMQVARNLKEQVGQNA-TMESIEKAGHLVNLERPFVYNRQLKTILA 260 (270)
Q Consensus 202 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 260 (270)
-..+++..+.|++.+...+....+ ++ +..+.+|++|-+ ..-+.....|.+|++
T Consensus 125 ~r~~vllq~gDEvLDyr~a~~~y~----~~y~~~v~~GGdH~f--~~fe~~l~~I~~F~~ 178 (180)
T PRK04940 125 DRCLVILSRNDEVLDSQRTAEELH----PYYEIVWDEEQTHKF--KNISPHLQRIKAFKT 178 (180)
T ss_pred ccEEEEEeCCCcccCHHHHHHHhc----cCceEEEECCCCCCC--CCHHHHHHHHHHHHh
Confidence 346899999999998877665443 34 688889888876 455567788888884
No 137
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=99.24 E-value=1.7e-09 Score=88.01 Aligned_cols=127 Identities=14% Similarity=0.092 Sum_probs=85.0
Q ss_pred eeEEEeec--CCeEEEEEecCC---CCCCceEEEeCCCCCcccccHHHHHH-------------------HhhccceEEe
Q 024228 22 TQRTIEIE--PGTILNIWVPKK---TTKKHAVVLLHPFGFDGILTWQFQVL-------------------ALAKTYEVYV 77 (270)
Q Consensus 22 ~~~~i~~~--~g~~l~~~~~~~---~~~~~~vv~~hG~~~~~~~~~~~~~~-------------------~l~~~~~v~~ 77 (270)
..-++.+. .+..++||.... ....|.||++.|++|++. .+..+.+ .+.+..+++.
T Consensus 12 ~sGyl~~~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS-~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~an~l~ 90 (415)
T PF00450_consen 12 YSGYLPVNDNENAHLFYWFFESRNDPEDDPLILWLNGGPGCSS-MWGLFGENGPFRINPDGPYTLEDNPYSWNKFANLLF 90 (415)
T ss_dssp EEEEEEECTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-T-HHHHHCTTSSEEEETTSTSEEEE-TT-GGGTSEEEE
T ss_pred EEEEEecCCCCCcEEEEEEEEeCCCCCCccEEEEecCCceecc-ccccccccCceEEeecccccccccccccccccceEE
Confidence 34456665 678888875543 256799999999999888 6644321 1223478999
Q ss_pred ecCC-CCCCCCCCCCC---CChHHHHHHHHHHHHHh-------CCCceEEEEEchhHHHHHHHHhh----C------ccc
Q 024228 78 PDFL-FFGSSVTDRPD---RTASFQAECMAKGLRKL-------GVEKCTLVGVSYGGMVGFKMAEM----Y------PDL 136 (270)
Q Consensus 78 ~d~~-g~G~s~~~~~~---~~~~~~~~~~~~~l~~~-------~~~~~~l~G~S~Gg~~a~~~a~~----~------p~~ 136 (270)
+|.| |.|.|...... .+.++.++++..+|..+ ...+++|.|.|+||..+-.+|.. . +-.
T Consensus 91 iD~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~in 170 (415)
T PF00450_consen 91 IDQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKIN 170 (415)
T ss_dssp E--STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSE
T ss_pred EeecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccc
Confidence 9966 99999866544 37788888888888764 44589999999999887666653 2 234
Q ss_pred cccEEEecccCCC
Q 024228 137 VESMVVTCSVMGL 149 (270)
Q Consensus 137 v~~~i~~~~~~~~ 149 (270)
++++++.++....
T Consensus 171 LkGi~IGng~~dp 183 (415)
T PF00450_consen 171 LKGIAIGNGWIDP 183 (415)
T ss_dssp EEEEEEESE-SBH
T ss_pred cccceecCccccc
Confidence 8899999888764
No 138
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=99.22 E-value=5.9e-10 Score=81.87 Aligned_cols=198 Identities=12% Similarity=0.008 Sum_probs=111.2
Q ss_pred EeCCCC--CcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHH-hCCCceEEEEEchhHHHH
Q 024228 50 LLHPFG--FDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRK-LGVEKCTLVGVSYGGMVG 126 (270)
Q Consensus 50 ~~hG~~--~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~l~G~S~Gg~~a 126 (270)
++|..+ ++.. .|..+...|...+.++++|.+|++.+... ..+.+.+++.+...+.. ....+++++|||+||.++
T Consensus 2 ~~~~~~~~~~~~-~~~~~~~~l~~~~~v~~~~~~g~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~~a 78 (212)
T smart00824 2 CFPSTAAPSGPH-EYARLAAALRGRRDVSALPLPGFGPGEPL--PASADALVEAQAEAVLRAAGGRPFVLVGHSSGGLLA 78 (212)
T ss_pred ccCCCCCCCcHH-HHHHHHHhcCCCccEEEecCCCCCCCCCC--CCCHHHHHHHHHHHHHHhcCCCCeEEEEECHHHHHH
Confidence 445433 4555 78899999988899999999999866533 24566666655554443 345689999999999999
Q ss_pred HHHHhh---CccccccEEEecccCCCCchhh---hHhhhhccch-hhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhh
Q 024228 127 FKMAEM---YPDLVESMVVTCSVMGLTESVS---NAALERIGYE-SWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKH 199 (270)
Q Consensus 127 ~~~a~~---~p~~v~~~i~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (270)
..++.+ .++.+.+++++++......... .......... .................+.... ... ...
T Consensus 79 ~~~a~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~----~~~ 151 (212)
T smart00824 79 HAVAARLEARGIPPAAVVLLDTYPPGDPAPEGWLPELLRGVFEREDSFVPMDDARLTAMGAYLRLFG---GWT----PGP 151 (212)
T ss_pred HHHHHHHHhCCCCCcEEEEEccCCCCCccchhhHHHHHHHHHhhhcccccccchhhhHHHHHHHHhc---cCC----CCC
Confidence 888886 3456889988876543221100 0000000000 0000000000011111111000 000 112
Q ss_pred hheeeeEEEcCCCccC-CHHHHHHHHHHhcCCceEEEecCCCcceee-cchHhHHHHHHHH
Q 024228 200 ILEKIHLLWGENDKIF-DMQVARNLKEQVGQNATMESIEKAGHLVNL-ERPFVYNRQLKTI 258 (270)
Q Consensus 200 ~~~P~l~i~g~~D~~~-~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~i~~f 258 (270)
+.+|+.++.+++|... +......+.+......+++.+++ +|+.++ +++..+...+..|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~g-~H~~~~~~~~~~~~~~~~~~ 211 (212)
T smart00824 152 VAAPTLLVRASEPLAEWPDEDPDGWRAHWPLPHTVVDVPG-DHFTMMEEHAAATARAVHDW 211 (212)
T ss_pred CCCCEEEEeccCCCCCCCCCCcccccCCCCCCceeEEccC-chHHHHHHhHHHHHHHHHhh
Confidence 3379999999988654 22222334444334678888985 888875 5555566655554
No 139
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=99.14 E-value=7.3e-10 Score=83.15 Aligned_cols=178 Identities=17% Similarity=0.102 Sum_probs=109.1
Q ss_pred CCceeEEEeecCCeEEEE-EecC--C-C-CCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCCC
Q 024228 19 VGMTQRTIEIEPGTILNI-WVPK--K-T-TKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDR 93 (270)
Q Consensus 19 ~~~~~~~i~~~~g~~l~~-~~~~--~-~-~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~ 93 (270)
..-++-++...||..+.- +..+ + . .++..|||+-|..+..+ . .-+..-+.-.|.|+.+++||++.|.+.+...
T Consensus 212 ~NG~R~kiks~dgneiDtmF~d~r~n~~~ngq~LvIC~EGNAGFYE-v-G~m~tP~~lgYsvLGwNhPGFagSTG~P~p~ 289 (517)
T KOG1553|consen 212 KNGQRLKIKSSDGNEIDTMFLDGRPNQSGNGQDLVICFEGNAGFYE-V-GVMNTPAQLGYSVLGWNHPGFAGSTGLPYPV 289 (517)
T ss_pred CCCeEEEEeecCCcchhheeecCCCCCCCCCceEEEEecCCccceE-e-eeecChHHhCceeeccCCCCccccCCCCCcc
Confidence 334566777778877632 2221 1 1 23567888888766544 1 1112233345999999999999999877554
Q ss_pred ChHHHHHHHHH-HHHHhC--CCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhc
Q 024228 94 TASFQAECMAK-GLRKLG--VEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFL 170 (270)
Q Consensus 94 ~~~~~~~~~~~-~l~~~~--~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (270)
+....++.+.+ .|..++ .+.+++.|+|.||.-++.+|..+|+ |+++|+-+++-+.-......
T Consensus 290 n~~nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPd-VkavvLDAtFDDllpLAl~r-------------- 354 (517)
T KOG1553|consen 290 NTLNAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPD-VKAVVLDATFDDLLPLALFR-------------- 354 (517)
T ss_pred cchHHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCC-ceEEEeecchhhhhhHHhhh--------------
Confidence 44444444444 355555 4689999999999999999999998 99999987654321111000
Q ss_pred ccccHHHHHHHHHhhhhcC-CCChhhhhhhhheeeeEEEcCCCccCC
Q 024228 171 LPKTADALKVQFDIACYKL-PTLPAFVYKHILEKIHLLWGENDKIFD 216 (270)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~l~i~g~~D~~~~ 216 (270)
++..+. .......... .....+.+.++..|+.+|.-.+|+++.
T Consensus 355 MP~~~~---giV~~aiRnh~NLnnaell~ry~GPi~lIRRt~dEIit 398 (517)
T KOG1553|consen 355 MPTFFS---GIVEHAIRNHMNLNNAELLARYKGPIRLIRRTQDEIIT 398 (517)
T ss_pred chHHHH---HHHHHHHHHhcccchHHHHHhhcCchhHhhhhhHhhhh
Confidence 111111 1111111111 223456677777899999998888764
No 140
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.12 E-value=1.1e-08 Score=75.65 Aligned_cols=125 Identities=22% Similarity=0.305 Sum_probs=81.6
Q ss_pred ceeEEEeecCCeEEEEE--ecCC-CCCCceEEEeCCCCCcccccHHHHH--HHhhcc--ceEEeecCC-C------CCCC
Q 024228 21 MTQRTIEIEPGTILNIW--VPKK-TTKKHAVVLLHPFGFDGILTWQFQV--LALAKT--YEVYVPDFL-F------FGSS 86 (270)
Q Consensus 21 ~~~~~i~~~~g~~l~~~--~~~~-~~~~~~vv~~hG~~~~~~~~~~~~~--~~l~~~--~~v~~~d~~-g------~G~s 86 (270)
.+...+.. +|....|+ .+.. +.+.|.||++||..++.. .++... ..|++. |-|+.+|-- + .+.+
T Consensus 35 ~~~~s~~~-~g~~r~y~l~vP~g~~~~apLvv~LHG~~~sga-g~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~ 112 (312)
T COG3509 35 SSVASFDV-NGLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGA-GQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNW 112 (312)
T ss_pred CCcccccc-CCCccceEEEcCCCCCCCCCEEEEEecCCCChH-HhhcccchhhhhcccCcEEECcCccccccCCCccccc
Confidence 34445555 56555554 3333 244578999999999888 666554 666666 999988532 1 2222
Q ss_pred CCCCC----CCChHHHHHHHHHHHHHhCCC--ceEEEEEchhHHHHHHHHhhCccccccEEEecccC
Q 024228 87 VTDRP----DRTASFQAECMAKGLRKLGVE--KCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVM 147 (270)
Q Consensus 87 ~~~~~----~~~~~~~~~~~~~~l~~~~~~--~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~ 147 (270)
..+.. ..+...+.+.+..++.+.+++ +|++.|.|-||.++..++..+|+.+.++..+++..
T Consensus 113 ~~p~~~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 113 FGPADRRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred CCcccccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 11221 123333344444445555554 89999999999999999999999999988887665
No 141
>COG4099 Predicted peptidase [General function prediction only]
Probab=99.11 E-value=3.1e-09 Score=78.28 Aligned_cols=156 Identities=18% Similarity=0.206 Sum_probs=92.0
Q ss_pred cCCeEEEEEecCC-----CCCC-ceEEEeCCCCCcccccHHHHHHHh------hcc--ceEEeecCCC-CCCCCCCCCCC
Q 024228 29 EPGTILNIWVPKK-----TTKK-HAVVLLHPFGFDGILTWQFQVLAL------AKT--YEVYVPDFLF-FGSSVTDRPDR 93 (270)
Q Consensus 29 ~~g~~l~~~~~~~-----~~~~-~~vv~~hG~~~~~~~~~~~~~~~l------~~~--~~v~~~d~~g-~G~s~~~~~~~ 93 (270)
+.|.++.|....+ .+.- |.+||+||.+..+......+...+ ..+ +-|+++.+-- +-.++. ....
T Consensus 169 ~tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedqcfVlAPQy~~if~d~e~-~t~~ 247 (387)
T COG4099 169 STGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQYNPIFADSEE-KTLL 247 (387)
T ss_pred ccCceeeEEEecccccCCCCccccEEEEEecCCCCCchhhhhhhcCccceeeecccCceEEEccccccccccccc-ccch
Confidence 3577777644332 1233 899999999877662332222111 111 3344444211 111111 1111
Q ss_pred ChHHHHHHHHHH-HHHh--CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhc
Q 024228 94 TASFQAECMAKG-LRKL--GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFL 170 (270)
Q Consensus 94 ~~~~~~~~~~~~-l~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (270)
......+.+.++ .++. +..+|+++|.|+||+.++.++.++|+.+.+.+++++...... ..
T Consensus 248 ~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~d~v~-----lv------------ 310 (387)
T COG4099 248 YLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGGDRVY-----LV------------ 310 (387)
T ss_pred hHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCCCchhh-----hh------------
Confidence 222233344422 3333 456899999999999999999999999999999987544100 00
Q ss_pred ccccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc
Q 024228 171 LPKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG 228 (270)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~ 228 (270)
+ .+++ .|+.++|+.+|.++|.+.++-+.+.+.
T Consensus 311 ---------~---------------~lk~--~piWvfhs~dDkv~Pv~nSrv~y~~lk 342 (387)
T COG4099 311 ---------R---------------TLKK--APIWVFHSSDDKVIPVSNSRVLYERLK 342 (387)
T ss_pred ---------h---------------hhcc--CceEEEEecCCCccccCcceeehHHHH
Confidence 0 0000 799999999999999887766665554
No 142
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=99.11 E-value=1.7e-10 Score=88.03 Aligned_cols=202 Identities=14% Similarity=-0.025 Sum_probs=111.3
Q ss_pred CCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCC--CCCCCCCCC---CCh---HHHHHHHHHHHHH------
Q 024228 44 KKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFF--GSSVTDRPD---RTA---SFQAECMAKGLRK------ 108 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~--G~s~~~~~~---~~~---~~~~~~~~~~l~~------ 108 (270)
..|.|++-||.++... .|..+++.+++. |-|..+|.+|. |..+..... +.. -+...|+..+|+.
T Consensus 70 ~~PlvvlshG~Gs~~~-~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~ 148 (365)
T COG4188 70 LLPLVVLSHGSGSYVT-GFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLTA 148 (365)
T ss_pred cCCeEEecCCCCCCcc-chhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHhhc
Confidence 4689999999999988 999999999999 99999999984 333221111 111 1122333333332
Q ss_pred -------hCCCceEEEEEchhHHHHHHHHhhCcccc--c------cEEEecccCCCCchhhhHhhhhccchhhhhhcccc
Q 024228 109 -------LGVEKCTLVGVSYGGMVGFKMAEMYPDLV--E------SMVVTCSVMGLTESVSNAALERIGYESWVDFLLPK 173 (270)
Q Consensus 109 -------~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v--~------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (270)
++..+|.++|||+||+.++..+....+-. . +.+...+...- . ............... ...
T Consensus 149 sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~~~~~~~~C~~~~~~~~~~~~~~-~---~~l~q~~av~~~~~~-~~~ 223 (365)
T COG4188 149 SPALAGRLDPQRVGVLGHSFGGYTAMELAGAELDAEALLQHCESASRICLDPPGLN-G---RLLNQCAAVWLPRQA-YDL 223 (365)
T ss_pred CcccccccCccceEEEecccccHHHHHhccccccHHHHHHHhhhhhhcccCCCCcC-h---hhhccccccccchhh-hcc
Confidence 23458999999999999999887554311 0 01111111000 0 000000000000000 000
Q ss_pred cHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHH-HHHHHHHHhcCC-ceEEEecCCCcceeecchHhH
Q 024228 174 TADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQ-VARNLKEQVGQN-ATMESIEKAGHLVNLERPFVY 251 (270)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~~~~~ 251 (270)
....++..+.........+...-+.++.+|++++.|..|.+.|.. ....-...+++. ..+..++++.|+.+++-.++.
T Consensus 224 rDpriravvA~~p~~~~~Fg~tgl~~v~~P~~~~a~s~D~~aP~~~~~~~~f~~l~g~~k~~~~vp~a~h~sfl~~~~~~ 303 (365)
T COG4188 224 RDPRIRAVVAINPALGMIFGTTGLVKVTDPVLLAAGSADGFAPPVTEQIRPFGYLPGALKYLRLVPGATHFSFLELCKEG 303 (365)
T ss_pred ccccceeeeeccCCcccccccccceeeecceeeecccccccCCcccccccccccCCcchhheeecCCCccccccccCccc
Confidence 000011111111111122234445666699999999999977654 344455566622 468889999999998766553
No 143
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.08 E-value=5.2e-09 Score=84.11 Aligned_cols=177 Identities=13% Similarity=0.127 Sum_probs=113.9
Q ss_pred CCceEEEeCCCCC-c--cc--ccHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHH--------HhC
Q 024228 44 KKHAVVLLHPFGF-D--GI--LTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLR--------KLG 110 (270)
Q Consensus 44 ~~~~vv~~hG~~~-~--~~--~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~--------~~~ 110 (270)
..|.++++||.+. . ++ ..|........+...+-+||++.-- ...++...++-+..+.+ ++.
T Consensus 175 ~spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~i------gG~nI~h~ae~~vSf~r~kvlei~gefp 248 (784)
T KOG3253|consen 175 ASPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNPI------GGANIKHAAEYSVSFDRYKVLEITGEFP 248 (784)
T ss_pred CCceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCCC------CCcchHHHHHHHHHHhhhhhhhhhccCC
Confidence 4678899999881 1 11 2333344444444888888887321 11334444444443333 234
Q ss_pred CCceEEEEEchhHHHHHHHHhhCc-cccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccHHHHHHHHHhhhhcC
Q 024228 111 VEKCTLVGVSYGGMVGFKMAEMYP-DLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKL 189 (270)
Q Consensus 111 ~~~~~l~G~S~Gg~~a~~~a~~~p-~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (270)
..+++|+|.|||+.+++....... ..|.++|.++-+.......
T Consensus 249 ha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~vdgp------------------------------------ 292 (784)
T KOG3253|consen 249 HAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDTVDGP------------------------------------ 292 (784)
T ss_pred CCceEEEecccCceeeEEeccccCCceEEEEEEecccccCCCcc------------------------------------
Confidence 568999999999988887776543 2488888877544322110
Q ss_pred CCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecc---------hHhHHHHHHHHHH
Q 024228 190 PTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLER---------PFVYNRQLKTILA 260 (270)
Q Consensus 190 ~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~---------~~~~~~~i~~fl~ 260 (270)
....++.+-++..|+||+.|.+|..++++..+.+++++....+++++.+++|.+-... ..++...+.+|+.
T Consensus 293 rgirDE~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMqA~~elhVI~~adhsmaipk~k~esegltqseVd~~i~~aI~ 372 (784)
T KOG3253|consen 293 RGIRDEALLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQAEVELHVIGGADHSMAIPKRKVESEGLTQSEVDSAIAQAIK 372 (784)
T ss_pred cCCcchhhHhcCCceEEEecCCcccCCHHHHHHHHHHhhccceEEEecCCCccccCCccccccccccHHHHHHHHHHHHH
Confidence 0122333444558999999999999999999999999887789999999999986522 2345555555554
Q ss_pred hh
Q 024228 261 SL 262 (270)
Q Consensus 261 ~~ 262 (270)
+.
T Consensus 373 ef 374 (784)
T KOG3253|consen 373 EF 374 (784)
T ss_pred HH
Confidence 44
No 144
>COG3150 Predicted esterase [General function prediction only]
Probab=99.03 E-value=3.3e-08 Score=66.57 Aligned_cols=91 Identities=15% Similarity=0.144 Sum_probs=65.4
Q ss_pred EEEeCCCCCcccccHHHH--HHHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEEchhHHH
Q 024228 48 VVLLHPFGFDGILTWQFQ--VLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVSYGGMV 125 (270)
Q Consensus 48 vv~~hG~~~~~~~~~~~~--~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~ 125 (270)
||++||+.++.. ..... .+.+.+....+.+- . +....++...++.+..++...+.+...|+|.|+||+.
T Consensus 2 ilYlHGFnSSP~-shka~l~~q~~~~~~~~i~y~-------~-p~l~h~p~~a~~ele~~i~~~~~~~p~ivGssLGGY~ 72 (191)
T COG3150 2 ILYLHGFNSSPG-SHKAVLLLQFIDEDVRDIEYS-------T-PHLPHDPQQALKELEKAVQELGDESPLIVGSSLGGYY 72 (191)
T ss_pred eEEEecCCCCcc-cHHHHHHHHHHhccccceeee-------c-CCCCCCHHHHHHHHHHHHHHcCCCCceEEeecchHHH
Confidence 899999999888 55543 34555443222222 1 2233578888999999999998888999999999999
Q ss_pred HHHHHhhCccccccEEEecccCCCC
Q 024228 126 GFKMAEMYPDLVESMVVTCSVMGLT 150 (270)
Q Consensus 126 a~~~a~~~p~~v~~~i~~~~~~~~~ 150 (270)
|.+++.++. +++ |+++|...+.
T Consensus 73 At~l~~~~G--ira-v~~NPav~P~ 94 (191)
T COG3150 73 ATWLGFLCG--IRA-VVFNPAVRPY 94 (191)
T ss_pred HHHHHHHhC--Chh-hhcCCCcCch
Confidence 999999875 555 4556765543
No 145
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=99.01 E-value=1.8e-07 Score=75.08 Aligned_cols=182 Identities=12% Similarity=0.105 Sum_probs=100.0
Q ss_pred eEEEEEecCC--CCCCceEEEeCCCCCcccccHHHHHHHh-hcc----ceEEeecCCCCC-CCCCCCCC-CChHHHHHHH
Q 024228 32 TILNIWVPKK--TTKKHAVVLLHPFGFDGILTWQFQVLAL-AKT----YEVYVPDFLFFG-SSVTDRPD-RTASFQAECM 102 (270)
Q Consensus 32 ~~l~~~~~~~--~~~~~~vv~~hG~~~~~~~~~~~~~~~l-~~~----~~v~~~d~~g~G-~s~~~~~~-~~~~~~~~~~ 102 (270)
.++.++.+.. ..+.|+|+++||............+..| +++ ..++.+|..+.. ++...... .....+.+++
T Consensus 194 r~v~VY~P~~y~~~~~PvlyllDG~~w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~~R~~el~~~~~f~~~l~~eL 273 (411)
T PRK10439 194 RRVWIYTTGDAAPEERPLAILLDGQFWAESMPVWPALDSLTHRGQLPPAVYLLIDAIDTTHRSQELPCNADFWLAVQQEL 273 (411)
T ss_pred eEEEEEECCCCCCCCCCEEEEEECHHhhhcCCHHHHHHHHHHcCCCCceEEEEECCCCcccccccCCchHHHHHHHHHHH
Confidence 5566666643 2346889999995422210112223333 333 346777753211 11111111 1233345666
Q ss_pred HHHHHHh-----CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccHHH
Q 024228 103 AKGLRKL-----GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADA 177 (270)
Q Consensus 103 ~~~l~~~-----~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (270)
.-++++. +.++.+|.|+||||..|+.++.++|+++.+++.+++........ ......
T Consensus 274 lP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ww~~~~------------------~~~~~~ 335 (411)
T PRK10439 274 LPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSFWWPHRG------------------GQQEGV 335 (411)
T ss_pred HHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccceecCCcc------------------CCchhH
Confidence 6666653 34578999999999999999999999999999999864322100 000000
Q ss_pred HHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc---CCceEEEecCCCcce
Q 024228 178 LKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG---QNATMESIEKAGHLV 243 (270)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~ 243 (270)
+...+..... ......+.+-+|+.|... .+..+.+.+.+. -+.++.+++| ||..
T Consensus 336 l~~~l~~~~~----------~~~~lr~~i~~G~~E~~~-~~~~~~l~~~L~~~G~~~~~~~~~G-GHd~ 392 (411)
T PRK10439 336 LLEQLKAGEV----------SARGLRIVLEAGRREPMI-MRANQALYAQLHPAGHSVFWRQVDG-GHDA 392 (411)
T ss_pred HHHHHHhccc----------CCCCceEEEeCCCCCchH-HHHHHHHHHHHHHCCCcEEEEECCC-CcCH
Confidence 1111111000 000135777789888554 345566666654 2578888886 7864
No 146
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=99.00 E-value=4.8e-10 Score=86.90 Aligned_cols=107 Identities=21% Similarity=0.181 Sum_probs=64.0
Q ss_pred CCCceEEEeCCCCCcc-cccHHH-HHH-Hhhc--c-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHH------hC
Q 024228 43 TKKHAVVLLHPFGFDG-ILTWQF-QVL-ALAK--T-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRK------LG 110 (270)
Q Consensus 43 ~~~~~vv~~hG~~~~~-~~~~~~-~~~-~l~~--~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~------~~ 110 (270)
.++|++|++|||.++. ...|.. +.. .+.. + ++|+++|+..--...............+.+..+|.. +.
T Consensus 69 ~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~Y~~a~~n~~~vg~~la~~l~~L~~~~g~~ 148 (331)
T PF00151_consen 69 PSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNNYPQAVANTRLVGRQLAKFLSFLINNFGVP 148 (331)
T ss_dssp TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS-HHHHHHHHHHHHHHHHHHHHHHHHHH---
T ss_pred CCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccccccchhhhHHHHHHHHHHHHHHHHhhcCCC
Confidence 4689999999999988 335543 344 4555 4 999999996321110000001112223333333333 24
Q ss_pred CCceEEEEEchhHHHHHHHHhhCcc--ccccEEEecccCCC
Q 024228 111 VEKCTLVGVSYGGMVGFKMAEMYPD--LVESMVVTCSVMGL 149 (270)
Q Consensus 111 ~~~~~l~G~S~Gg~~a~~~a~~~p~--~v~~~i~~~~~~~~ 149 (270)
.++++|+|||+||++|-.++..... +|.++..++|+.+.
T Consensus 149 ~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP~ 189 (331)
T PF00151_consen 149 PENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGPL 189 (331)
T ss_dssp GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-TT
T ss_pred hhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCccccc
Confidence 5689999999999999999988877 89999999998764
No 147
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.98 E-value=1e-07 Score=68.89 Aligned_cols=200 Identities=15% Similarity=0.096 Sum_probs=115.6
Q ss_pred ceEEEeCCCCCcccccHHHHHHHhhccc------eEEeecCCCC----CCCCC----CC-------CCCChHHHHHHHHH
Q 024228 46 HAVVLLHPFGFDGILTWQFQVLALAKTY------EVYVPDFLFF----GSSVT----DR-------PDRTASFQAECMAK 104 (270)
Q Consensus 46 ~~vv~~hG~~~~~~~~~~~~~~~l~~~~------~v~~~d~~g~----G~s~~----~~-------~~~~~~~~~~~~~~ 104 (270)
-|.||+||.+|+.. ....++..|.+.+ -++.+|--|. |.=+. |. ...+..++...+..
T Consensus 46 iPTIfIhGsgG~as-S~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~ 124 (288)
T COG4814 46 IPTIFIHGSGGTAS-SLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKK 124 (288)
T ss_pred cceEEEecCCCChh-HHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHH
Confidence 47899999999999 8888887776654 3555565552 11111 10 11344555666666
Q ss_pred HHHHh----CCCceEEEEEchhHHHHHHHHhhCcc-----ccccEEEecccCCCCchhhhHhhhhccchhhhhhcccccH
Q 024228 105 GLRKL----GVEKCTLVGVSYGGMVGFKMAEMYPD-----LVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTA 175 (270)
Q Consensus 105 ~l~~~----~~~~~~l~G~S~Gg~~a~~~a~~~p~-----~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (270)
++..| +..++-++||||||.-...|+..+.. .+..+|.++++.................... +...
T Consensus 125 ~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN~~~l~~de~v~~v~~~~~-----~~~~ 199 (288)
T COG4814 125 AMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFNVGNLVPDETVTDVLKDGP-----GLIK 199 (288)
T ss_pred HHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEecccccccccCCCcchheeeccCc-----cccC
Confidence 66554 67899999999999999999887632 4899999987765211111111111100000 0000
Q ss_pred HHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCC------ccCCHHHHHHHHHHhcCCc-e----EEEecCCCccee
Q 024228 176 DALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGEND------KIFDMQVARNLKEQVGQNA-T----MESIEKAGHLVN 244 (270)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D------~~~~~~~~~~~~~~~~~~~-~----~~~~~~~gH~~~ 244 (270)
....+++.... ...+.. ..+|+|.|+-| ..||...+...+..++.+. . +..=+++.|.-+
T Consensus 200 t~y~~y~~~n~---k~v~~~------~evl~IaGDl~dg~~tDG~Vp~assls~~~lf~~~~ksy~e~~~~Gk~a~Hs~l 270 (288)
T COG4814 200 TPYYDYIAKNY---KKVSPN------TEVLLIAGDLDDGKQTDGAVPWASSLSIYHLFKKNGKSYIESLYKGKDARHSKL 270 (288)
T ss_pred cHHHHHHHhcc---eeCCCC------cEEEEEecccccCCcCCCceechHhHHHHHHhccCcceeEEEeeeCCcchhhcc
Confidence 11111111110 001100 67999999865 4566666666666665332 2 222355789888
Q ss_pred ecchHhHHHHHHHHHHh
Q 024228 245 LERPFVYNRQLKTILAS 261 (270)
Q Consensus 245 ~~~~~~~~~~i~~fl~~ 261 (270)
.|+|. +.+.+..||-+
T Consensus 271 hen~~-v~~yv~~FLw~ 286 (288)
T COG4814 271 HENPT-VAKYVKNFLWE 286 (288)
T ss_pred CCChh-HHHHHHHHhhc
Confidence 88876 66888888753
No 148
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=98.98 E-value=8.8e-08 Score=73.47 Aligned_cols=60 Identities=12% Similarity=0.036 Sum_probs=43.6
Q ss_pred eeeeEEEcCCCccCCHHHHHHHHHHhc--C--CceEEEecCCCcceeecchHhHHHHHHHHHHhhhh
Q 024228 202 EKIHLLWGENDKIFDMQVARNLKEQVG--Q--NATMESIEKAGHLVNLERPFVYNRQLKTILASLVH 264 (270)
Q Consensus 202 ~P~l~i~g~~D~~~~~~~~~~~~~~~~--~--~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~ 264 (270)
.|+++.+|..|.++|....+.+.+.+. + +++++.+++.+|....-. -.....+||.....
T Consensus 220 ~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~~~~---~~~~a~~Wl~~rf~ 283 (290)
T PF03583_consen 220 VPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGAAFA---SAPDALAWLDDRFA 283 (290)
T ss_pred CCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhhhhc---CcHHHHHHHHHHHC
Confidence 899999999999999999888877754 2 567888888999864311 11334466665544
No 149
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.98 E-value=7.4e-10 Score=80.27 Aligned_cols=87 Identities=23% Similarity=0.223 Sum_probs=52.2
Q ss_pred ceEEEeCCCCCcccccHHHHHHHhhcc-ce---EEeecCCCCCCCCCCCCC----CChHHHHHHHHHHHHHhCCCceEEE
Q 024228 46 HAVVLLHPFGFDGILTWQFQVLALAKT-YE---VYVPDFLFFGSSVTDRPD----RTASFQAECMAKGLRKLGVEKCTLV 117 (270)
Q Consensus 46 ~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~---v~~~d~~g~G~s~~~~~~----~~~~~~~~~~~~~l~~~~~~~~~l~ 117 (270)
.||||+||.+++....|..+.+.|.++ |. ++++++-........... .+..++..-|.++++..+. ++-|+
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TGa-kVDIV 80 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTGA-KVDIV 80 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT---EEEE
T ss_pred CCEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhCC-EEEEE
Confidence 589999999995545999999999988 88 899998433221111000 1122344455555566688 99999
Q ss_pred EEchhHHHHHHHHhhC
Q 024228 118 GVSYGGMVGFKMAEMY 133 (270)
Q Consensus 118 G~S~Gg~~a~~~a~~~ 133 (270)
||||||.++..+....
T Consensus 81 gHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 81 GHSMGGTIARYYIKGG 96 (219)
T ss_dssp EETCHHHHHHHHHHHC
T ss_pred EcCCcCHHHHHHHHHc
Confidence 9999999998887644
No 150
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=98.98 E-value=1e-08 Score=76.07 Aligned_cols=161 Identities=15% Similarity=0.123 Sum_probs=99.0
Q ss_pred CCCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCC------C---CCC------------CCC------
Q 024228 43 TKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSV------T---DRP------------DRT------ 94 (270)
Q Consensus 43 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~------~---~~~------------~~~------ 94 (270)
++-|.+||.||.+++.. .|..+.-.|+.+ |-|.+++.|-+-.+. . ++. +..
T Consensus 116 ~k~PvvvFSHGLggsRt-~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~irN 194 (399)
T KOG3847|consen 116 DKYPVVVFSHGLGGSRT-LYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHIRN 194 (399)
T ss_pred CCccEEEEecccccchh-hHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEeeC
Confidence 34589999999999999 999999999999 999999998643221 0 000 000
Q ss_pred --hHHHHHHH---HHHHHHh------------------------CCCceEEEEEchhHHHHHHHHhhCccccccEEEecc
Q 024228 95 --ASFQAECM---AKGLRKL------------------------GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCS 145 (270)
Q Consensus 95 --~~~~~~~~---~~~l~~~------------------------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~ 145 (270)
...-++.+ ..+|+.+ +..++.++|||+||..++...+.+. ++++.|++++
T Consensus 195 eqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t-~FrcaI~lD~ 273 (399)
T KOG3847|consen 195 EQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHT-DFRCAIALDA 273 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhcccc-ceeeeeeeee
Confidence 00112222 2223222 1236889999999999988777654 4888888876
Q ss_pred cCCCCchhhhHhhhhccchhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHH
Q 024228 146 VMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKE 225 (270)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~ 225 (270)
+..+-... ...+...|+++|..+ | +-..+....+.+
T Consensus 274 WM~Pl~~~------------------------------------------~~~~arqP~~finv~-~-fQ~~en~~vmKk 309 (399)
T KOG3847|consen 274 WMFPLDQL------------------------------------------QYSQARQPTLFINVE-D-FQWNENLLVMKK 309 (399)
T ss_pred eecccchh------------------------------------------hhhhccCCeEEEEcc-c-ccchhHHHHHHh
Confidence 64321110 111222789998843 3 323455555555
Q ss_pred HhcC--CceEEEecCCCcceeecchH
Q 024228 226 QVGQ--NATMESIEKAGHLVNLERPF 249 (270)
Q Consensus 226 ~~~~--~~~~~~~~~~gH~~~~~~~~ 249 (270)
..+. ...+.++.|+=|..+-+-|-
T Consensus 310 i~~~n~g~~~it~~GsVHqnfsDfpf 335 (399)
T KOG3847|consen 310 IESQNEGNHVITLDGSVHQNFSDFPF 335 (399)
T ss_pred hhCCCccceEEEEccceecccccCcc
Confidence 5542 34677788888876554443
No 151
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=98.96 E-value=1e-07 Score=71.53 Aligned_cols=210 Identities=13% Similarity=0.004 Sum_probs=112.9
Q ss_pred eEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCC---ceEEEEEchh
Q 024228 47 AVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVE---KCTLVGVSYG 122 (270)
Q Consensus 47 ~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~l~G~S~G 122 (270)
++|++=||.+.......+..+...+. +.++.+-.+-..... ........++.+.+.+...... ++.+-.+|.|
T Consensus 1 plvvl~gW~gA~~~hl~KY~~~Y~~~g~~il~~~~~~~~~~~---~~~~~~~~~~~l~~~l~~~~~~~~~~il~H~FSnG 77 (240)
T PF05705_consen 1 PLVVLLGWMGAKPKHLAKYSDLYQDPGFDILLVTSPPADFFW---PSKRLAPAADKLLELLSDSQSASPPPILFHSFSNG 77 (240)
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEeCCHHHHee---eccchHHHHHHHHHHhhhhccCCCCCEEEEEEECc
Confidence 46777788766652444444444334 888887655221111 1134445555566666554333 7999999998
Q ss_pred HHHHHHHHhh----C------ccccccEEEecccCCCCchhhhHhhhh-ccchhhhhh--cccccHHHHHHHHHhhhhcC
Q 024228 123 GMVGFKMAEM----Y------PDLVESMVVTCSVMGLTESVSNAALER-IGYESWVDF--LLPKTADALKVQFDIACYKL 189 (270)
Q Consensus 123 g~~a~~~a~~----~------p~~v~~~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 189 (270)
|...+..... . -.+++++|+-+++.............. ......... ........+...........
T Consensus 78 G~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (240)
T PF05705_consen 78 GSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPGIPTYSSSARAFSAALPKSSPRWFVPLWPLLQFLLRLSIISYFIFG 157 (240)
T ss_pred hHHHHHHHHHHHHhcccccccccccceeEEeCCCCccccccHHHHHHHHcCccchhhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 8776655441 1 124889898777654332111111110 000000000 00000000000000000000
Q ss_pred CCChhh---------hhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc---CCceEEEecCCCcceee-cchHhHHHHHH
Q 024228 190 PTLPAF---------VYKHILEKIHLLWGENDKIFDMQVARNLKEQVG---QNATMESIEKAGHLVNL-ERPFVYNRQLK 256 (270)
Q Consensus 190 ~~~~~~---------~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~~~-~~~~~~~~~i~ 256 (270)
...... ......+|-|+++++.|.+++.+..+++.+... .+++...++++.|..++ .+|+++.+.+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~ 237 (240)
T PF05705_consen 158 YPDVQEYYRRALNDFANSPSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVD 237 (240)
T ss_pred CCcHHHHHHHHHhhhhcCCCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHHHHHHH
Confidence 000000 011112899999999999999998888877654 24677888999999988 78999999999
Q ss_pred HHH
Q 024228 257 TIL 259 (270)
Q Consensus 257 ~fl 259 (270)
+|+
T Consensus 238 ~fw 240 (240)
T PF05705_consen 238 EFW 240 (240)
T ss_pred hhC
Confidence 884
No 152
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.94 E-value=3.4e-09 Score=85.02 Aligned_cols=92 Identities=14% Similarity=0.082 Sum_probs=68.0
Q ss_pred cccccHHHHHHHhhccceEEeecCCCCCCCCCCCCC--CChHHHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCc
Q 024228 57 DGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPD--RTASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYP 134 (270)
Q Consensus 57 ~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p 134 (270)
... .|..+++.|.+...+...|++|+|.+.+.... ...+.+.+.+.++.+..+.++++|+||||||.++..++..+|
T Consensus 106 ~~~-~~~~li~~L~~~GY~~~~dL~g~gYDwR~~~~~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~~p 184 (440)
T PLN02733 106 EVY-YFHDMIEQLIKWGYKEGKTLFGFGYDFRQSNRLPETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSLHS 184 (440)
T ss_pred hHH-HHHHHHHHHHHcCCccCCCcccCCCCccccccHHHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHHCC
Confidence 345 89999999998844558999999998765321 123334444444455557789999999999999999998887
Q ss_pred c----ccccEEEecccCCC
Q 024228 135 D----LVESMVVTCSVMGL 149 (270)
Q Consensus 135 ~----~v~~~i~~~~~~~~ 149 (270)
+ .|+++|.++++...
T Consensus 185 ~~~~k~I~~~I~la~P~~G 203 (440)
T PLN02733 185 DVFEKYVNSWIAIAAPFQG 203 (440)
T ss_pred HhHHhHhccEEEECCCCCC
Confidence 6 37888999876543
No 153
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.88 E-value=6e-08 Score=73.41 Aligned_cols=109 Identities=17% Similarity=0.092 Sum_probs=76.4
Q ss_pred CceeEEEeecCCeEEEEEec--CCCCCCceEEEeCCCCCcccccH------HHHHHHhhcc--ceEEeecCCCCCCCCCC
Q 024228 20 GMTQRTIEIEPGTILNIWVP--KKTTKKHAVVLLHPFGFDGILTW------QFQVLALAKT--YEVYVPDFLFFGSSVTD 89 (270)
Q Consensus 20 ~~~~~~i~~~~g~~l~~~~~--~~~~~~~~vv~~hG~~~~~~~~~------~~~~~~l~~~--~~v~~~d~~g~G~s~~~ 89 (270)
.+++..++. |+..+--... ....+...||+.-|.++..+ .. ......+++. .+|+.+++||.|.|.+.
T Consensus 111 ~~kRv~Iq~-D~~~IDt~~I~~~~a~~~RWiL~s~GNg~~~E-~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~ 188 (365)
T PF05677_consen 111 SVKRVPIQY-DGVKIDTMAIHQPEAKPQRWILVSNGNGECYE-NRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGP 188 (365)
T ss_pred ceeeEEEee-CCEEEEEEEeeCCCCCCCcEEEEEcCChHHhh-hhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCC
Confidence 345666666 7887743222 22356789999999887666 31 1223344444 89999999999999876
Q ss_pred CCCCChHHHHHHHHHHHHHh-------CCCceEEEEEchhHHHHHHHHhhC
Q 024228 90 RPDRTASFQAECMAKGLRKL-------GVEKCTLVGVSYGGMVGFKMAEMY 133 (270)
Q Consensus 90 ~~~~~~~~~~~~~~~~l~~~-------~~~~~~l~G~S~Gg~~a~~~a~~~ 133 (270)
. +.++++.|-.+.++.+ +.+.+++.|||+||.++..++.+.
T Consensus 189 ~---s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 189 P---SRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred C---CHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhc
Confidence 5 4577777766666655 235799999999999998876664
No 154
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=98.87 E-value=7.3e-07 Score=69.68 Aligned_cols=141 Identities=14% Similarity=0.113 Sum_probs=93.2
Q ss_pred CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhcc-c--hhhh--------hhcccccHHHH
Q 024228 110 GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIG-Y--ESWV--------DFLLPKTADAL 178 (270)
Q Consensus 110 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~-~--~~~~--------~~~~~~~~~~~ 178 (270)
.+++++|.|.|==|..++..|+. ..||++++-+.-...-.........+.++ . ..+. ..+.......+
T Consensus 170 ~i~~FvV~GaSKRGWTtWltaa~-D~RV~aivP~Vid~LN~~~~l~h~y~~yG~~ws~a~~dY~~~gi~~~l~tp~f~~L 248 (367)
T PF10142_consen 170 NIEKFVVTGASKRGWTTWLTAAV-DPRVKAIVPIVIDVLNMKANLEHQYRSYGGNWSFAFQDYYNEGITQQLDTPEFDKL 248 (367)
T ss_pred CccEEEEeCCchHhHHHHHhhcc-CcceeEEeeEEEccCCcHHHHHHHHHHhCCCCccchhhhhHhCchhhcCCHHHHHH
Confidence 57799999999999999999884 46899888654332211222222222222 1 0111 11111122222
Q ss_pred HHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHH
Q 024228 179 KVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTI 258 (270)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~f 258 (270)
.+......+ ..++..|.++|.|..|++..+....-+...+++...+..+|+++|.... ..+.+.+..|
T Consensus 249 ~~ivDP~~Y---------~~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G~K~lr~vPN~~H~~~~---~~~~~~l~~f 316 (367)
T PF10142_consen 249 MQIVDPYSY---------RDRLTMPKYIINATGDEFFVPDSSNFYYDKLPGEKYLRYVPNAGHSLIG---SDVVQSLRAF 316 (367)
T ss_pred HHhcCHHHH---------HHhcCccEEEEecCCCceeccCchHHHHhhCCCCeeEEeCCCCCcccch---HHHHHHHHHH
Confidence 232222222 3445599999999999999999999999999988899999999999865 5567888888
Q ss_pred HHhhh
Q 024228 259 LASLV 263 (270)
Q Consensus 259 l~~~~ 263 (270)
+....
T Consensus 317 ~~~~~ 321 (367)
T PF10142_consen 317 YNRIQ 321 (367)
T ss_pred HHHHH
Confidence 87653
No 155
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=98.86 E-value=4e-08 Score=79.30 Aligned_cols=231 Identities=13% Similarity=0.055 Sum_probs=137.3
Q ss_pred eeEEEeecCCeEEEEEecC-C--CCCCceEEEeCCCCCccc-ccHHHHHH-HhhccceEEeecCCCCCCCCCCC----CC
Q 024228 22 TQRTIEIEPGTILNIWVPK-K--TTKKHAVVLLHPFGFDGI-LTWQFQVL-ALAKTYEVYVPDFLFFGSSVTDR----PD 92 (270)
Q Consensus 22 ~~~~i~~~~g~~l~~~~~~-~--~~~~~~vv~~hG~~~~~~-~~~~~~~~-~l~~~~~v~~~d~~g~G~s~~~~----~~ 92 (270)
+....+..||.+|.|+... . .++.|++|+--|+..-+. +.|..... .|.+....+..+.||=|+=.+.- ..
T Consensus 395 eQ~~atSkDGT~IPYFiv~K~~~~d~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfGp~WH~Aa~k 474 (648)
T COG1505 395 EQFFATSKDGTRIPYFIVRKGAKKDENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFGPEWHQAGMK 474 (648)
T ss_pred EEEEEEcCCCccccEEEEecCCcCCCCceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccCCccCHHHHHHHhh
Confidence 4445555699999987664 2 235788887766554443 45555544 45555888888999877544221 11
Q ss_pred CChHHHHHHHHHHHHHh---C---CCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccchhh
Q 024228 93 RTASFQAECMAKGLRKL---G---VEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESW 166 (270)
Q Consensus 93 ~~~~~~~~~~~~~l~~~---~---~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (270)
.+-....+|..++.+.| + .+++.+.|-|-||.+.-.+..++|+.+.++|+--|..++-. ...-..+..-.
T Consensus 475 ~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPllDMlR----Yh~l~aG~sW~ 550 (648)
T COG1505 475 ENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPLLDMLR----YHLLTAGSSWI 550 (648)
T ss_pred hcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccchhhhhh----hcccccchhhH
Confidence 33344566666666665 2 35789999999999999888999998888887666544211 11111122222
Q ss_pred hhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcC---CceEEEecCCCcce
Q 024228 167 VDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQ---NATMESIEKAGHLV 243 (270)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~---~~~~~~~~~~gH~~ 243 (270)
..+-.+..+.....+.....+.... +. .-..|+||-.+..|.-|.|..++.++..+.. .+-+.+=-++||..
T Consensus 551 ~EYG~Pd~P~d~~~l~~YSPy~nl~-~g----~kYP~~LITTs~~DDRVHPaHarKfaa~L~e~~~pv~~~e~t~gGH~g 625 (648)
T COG1505 551 AEYGNPDDPEDRAFLLAYSPYHNLK-PG----QKYPPTLITTSLHDDRVHPAHARKFAAKLQEVGAPVLLREETKGGHGG 625 (648)
T ss_pred hhcCCCCCHHHHHHHHhcCchhcCC-cc----ccCCCeEEEcccccccccchHHHHHHHHHHhcCCceEEEeecCCcccC
Confidence 2333444444444333222222211 00 1117999999999999989999999888761 22333334679988
Q ss_pred eecchHh--HHHHHHHHHHh
Q 024228 244 NLERPFV--YNRQLKTILAS 261 (270)
Q Consensus 244 ~~~~~~~--~~~~i~~fl~~ 261 (270)
--+..+. -...+..||.+
T Consensus 626 ~~~~~~~A~~~a~~~afl~r 645 (648)
T COG1505 626 AAPTAEIARELADLLAFLLR 645 (648)
T ss_pred CCChHHHHHHHHHHHHHHHH
Confidence 6544332 22334456554
No 156
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=98.85 E-value=9e-07 Score=70.74 Aligned_cols=99 Identities=23% Similarity=0.270 Sum_probs=68.0
Q ss_pred CCceEEEe-----C--CCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHh-----CC
Q 024228 44 KKHAVVLL-----H--PFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKL-----GV 111 (270)
Q Consensus 44 ~~~~vv~~-----h--G~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~-----~~ 111 (270)
.++++|++ | |+|+.+. =..+...|...+.|+.+.+. +.+.+..++++......++++.+ +.
T Consensus 67 ~krP~vViDPRAGHGpGIGGFK~--dSevG~AL~~GHPvYFV~F~-----p~P~pgQTl~DV~~ae~~Fv~~V~~~hp~~ 139 (581)
T PF11339_consen 67 TKRPFVVIDPRAGHGPGIGGFKP--DSEVGVALRAGHPVYFVGFF-----PEPEPGQTLEDVMRAEAAFVEEVAERHPDA 139 (581)
T ss_pred CCCCeEEeCCCCCCCCCccCCCc--ccHHHHHHHcCCCeEEEEec-----CCCCCCCcHHHHHHHHHHHHHHHHHhCCCC
Confidence 45566665 3 3444433 12455677777777776553 23344567777776666666654 23
Q ss_pred CceEEEEEchhHHHHHHHHhhCccccccEEEecccCCC
Q 024228 112 EKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGL 149 (270)
Q Consensus 112 ~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~ 149 (270)
.+.+|+|-|.||+.++.+|+.+|+.+.-+|+-+++...
T Consensus 140 ~kp~liGnCQgGWa~~mlAA~~Pd~~gplvlaGaPlsy 177 (581)
T PF11339_consen 140 PKPNLIGNCQGGWAAMMLAALRPDLVGPLVLAGAPLSY 177 (581)
T ss_pred CCceEEeccHHHHHHHHHHhcCcCccCceeecCCCccc
Confidence 48999999999999999999999999988887776543
No 157
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.84 E-value=3.8e-07 Score=70.96 Aligned_cols=105 Identities=15% Similarity=0.115 Sum_probs=69.8
Q ss_pred CCceEEEeCCCCCcccccHHH-------HHHHhhccceEEeecCCCCCCC-CCCCCCCChHHHHHHHHHHHHHhCCCceE
Q 024228 44 KKHAVVLLHPFGFDGILTWQF-------QVLALAKTYEVYVPDFLFFGSS-VTDRPDRTASFQAECMAKGLRKLGVEKCT 115 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~~~~~~-------~~~~l~~~~~v~~~d~~g~G~s-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 115 (270)
+.|.||++||+|-.-. .... +...|. ...++++|+.-.... ....-...+.+.++-...+++..+.++++
T Consensus 121 ~DpVlIYlHGGGY~l~-~~p~qi~~L~~i~~~l~-~~SILvLDYsLt~~~~~~~~yPtQL~qlv~~Y~~Lv~~~G~~nI~ 198 (374)
T PF10340_consen 121 SDPVLIYLHGGGYFLG-TTPSQIEFLLNIYKLLP-EVSILVLDYSLTSSDEHGHKYPTQLRQLVATYDYLVESEGNKNII 198 (374)
T ss_pred CCcEEEEEcCCeeEec-CCHHHHHHHHHHHHHcC-CCeEEEEeccccccccCCCcCchHHHHHHHHHHHHHhccCCCeEE
Confidence 4699999999886544 2222 223333 478999998744300 01111234455556666677677888999
Q ss_pred EEEEchhHHHHHHHHhhCc-----cccccEEEecccCCCC
Q 024228 116 LVGVSYGGMVGFKMAEMYP-----DLVESMVVTCSVMGLT 150 (270)
Q Consensus 116 l~G~S~Gg~~a~~~a~~~p-----~~v~~~i~~~~~~~~~ 150 (270)
|+|-|.||.+++.+.+... ...+++|+++|+....
T Consensus 199 LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 199 LMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred EEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 9999999999988776421 1368999999998765
No 158
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.82 E-value=3.4e-08 Score=73.16 Aligned_cols=106 Identities=15% Similarity=0.161 Sum_probs=68.2
Q ss_pred CCCceEEEeCCCCCcccccHHHHHHHhhc---cceEEeecCCCCCCCCCCC-CCCChHHHHHHHHHHHHHh----CCCce
Q 024228 43 TKKHAVVLLHPFGFDGILTWQFQVLALAK---TYEVYVPDFLFFGSSVTDR-PDRTASFQAECMAKGLRKL----GVEKC 114 (270)
Q Consensus 43 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~---~~~v~~~d~~g~G~s~~~~-~~~~~~~~~~~~~~~l~~~----~~~~~ 114 (270)
+++..+||+||+..+........++.... .-.++.+.+|..|.-..-. ...+...-...+.++|+.+ +.++|
T Consensus 16 ~~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~~~I 95 (233)
T PF05990_consen 16 PDKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPGIKRI 95 (233)
T ss_pred CCCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccCCceE
Confidence 45789999999998766222333322222 1579999999877532211 1123333345555555554 56799
Q ss_pred EEEEEchhHHHHHHHHhhC----c-----cccccEEEecccCC
Q 024228 115 TLVGVSYGGMVGFKMAEMY----P-----DLVESMVVTCSVMG 148 (270)
Q Consensus 115 ~l~G~S~Gg~~a~~~a~~~----p-----~~v~~~i~~~~~~~ 148 (270)
.|++||||+.+.+.+.... + .++..+++.+|-.+
T Consensus 96 ~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid 138 (233)
T PF05990_consen 96 HILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDID 138 (233)
T ss_pred EEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCC
Confidence 9999999999998876542 1 25778888886554
No 159
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.78 E-value=1.2e-07 Score=71.76 Aligned_cols=117 Identities=14% Similarity=0.040 Sum_probs=68.9
Q ss_pred EEEEEecCC---CCCCceEEEeCCCCCcccccH--HHHHHH-hhcc----ceEEeecCCCCCCCC--CC---------CC
Q 024228 33 ILNIWVPKK---TTKKHAVVLLHPFGFDGILTW--QFQVLA-LAKT----YEVYVPDFLFFGSSV--TD---------RP 91 (270)
Q Consensus 33 ~l~~~~~~~---~~~~~~vv~~hG~~~~~~~~~--~~~~~~-l~~~----~~v~~~d~~g~G~s~--~~---------~~ 91 (270)
++.++.|.. ..+-|+|+++||...... .+ ...+.. ..+. .-+++++..+.+... .. ..
T Consensus 9 ~~~VylP~~y~~~~~~PvlylldG~~~~~~-~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~~~~~~ 87 (251)
T PF00756_consen 9 RVWVYLPPGYDPSKPYPVLYLLDGQSGWFR-NGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSSRRADD 87 (251)
T ss_dssp EEEEEECTTGGTTTTEEEEEEESHTTHHHH-HHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTTCBCTS
T ss_pred EEEEEECCCCCCCCCCEEEEEccCCccccc-cchHHHHHHHHHHhCCCCceEEEEEeccccccccccccccccccccccc
Confidence 445555544 345688999999722221 22 112222 2221 445666665444110 00 01
Q ss_pred CCC----hHHHHHHHHHHHHHh-CC--CceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCC
Q 024228 92 DRT----ASFQAECMAKGLRKL-GV--EKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLT 150 (270)
Q Consensus 92 ~~~----~~~~~~~~~~~l~~~-~~--~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~ 150 (270)
... .+.+.++|...|+.- .. ++..|+|+||||..|+.++.++|+.+.+++.++|.....
T Consensus 88 ~~~~~~~~~~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~~~ 153 (251)
T PF00756_consen 88 SGGGDAYETFLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALDPS 153 (251)
T ss_dssp TTTHHHHHHHHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESETT
T ss_pred CCCCcccceehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCcccccc
Confidence 111 233455666666653 22 237999999999999999999999999999999875543
No 160
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=98.76 E-value=9.3e-06 Score=62.90 Aligned_cols=202 Identities=10% Similarity=0.063 Sum_probs=117.1
Q ss_pred eeEEEeecCCeEEEEEecCCC-CCCceEEEeCCCCCccc--ccHHHHHHHhhcc-ceEEeecCCCC--CCCCC-------
Q 024228 22 TQRTIEIEPGTILNIWVPKKT-TKKHAVVLLHPFGFDGI--LTWQFQVLALAKT-YEVYVPDFLFF--GSSVT------- 88 (270)
Q Consensus 22 ~~~~i~~~~g~~l~~~~~~~~-~~~~~vv~~hG~~~~~~--~~~~~~~~~l~~~-~~v~~~d~~g~--G~s~~------- 88 (270)
+..++...+...+..+.+... .....||++||.+.+.. .....+...|.+. +.++++.+|.- .....
T Consensus 63 e~~~L~~~~~~flaL~~~~~~~~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~ 142 (310)
T PF12048_consen 63 EVQWLQAGEERFLALWRPANSAKPQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEE 142 (310)
T ss_pred hcEEeecCCEEEEEEEecccCCCCceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCC
Confidence 455666644455666665543 44679999999998864 2334455777777 99999988861 10000
Q ss_pred -------CCCCC-------------Ch----HHHHHHHHHH---HHHhCCCceEEEEEchhHHHHHHHHhhCcc-ccccE
Q 024228 89 -------DRPDR-------------TA----SFQAECMAKG---LRKLGVEKCTLVGVSYGGMVGFKMAEMYPD-LVESM 140 (270)
Q Consensus 89 -------~~~~~-------------~~----~~~~~~~~~~---l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-~v~~~ 140 (270)
..... .. +.+..-+.+. +...+..+++|+||+.|+.+++.+....+. .++++
T Consensus 143 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daL 222 (310)
T PF12048_consen 143 VPSAGDQQLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKPPPMPDAL 222 (310)
T ss_pred CCCCCCCCcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCCCcccCeE
Confidence 00000 01 1122222223 333355669999999999999999998764 58999
Q ss_pred EEecccCCCCchhhhHhhhhccchhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHH
Q 024228 141 VVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVA 220 (270)
Q Consensus 141 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~ 220 (270)
|++++..+..... ..+. ..+.....|+|=|++.....+ ...+
T Consensus 223 V~I~a~~p~~~~n----------------------~~l~---------------~~la~l~iPvLDi~~~~~~~~-~~~a 264 (310)
T PF12048_consen 223 VLINAYWPQPDRN----------------------PALA---------------EQLAQLKIPVLDIYSADNPAS-QQTA 264 (310)
T ss_pred EEEeCCCCcchhh----------------------hhHH---------------HHhhccCCCEEEEecCCChHH-HHHH
Confidence 9999865432110 0011 112233389999988773332 2222
Q ss_pred HH---HHHHhc-CCceEEEecCCCcceeecchHhHHHHHHHHHHhh
Q 024228 221 RN---LKEQVG-QNATMESIEKAGHLVNLERPFVYNRQLKTILASL 262 (270)
Q Consensus 221 ~~---~~~~~~-~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 262 (270)
.. ..++.. .+.+-+.+.+..|... ...+.+.+.|..||+++
T Consensus 265 ~~R~~~a~r~~~~~YrQ~~L~~~~~~~~-~~~~~l~~rIrGWL~~~ 309 (310)
T PF12048_consen 265 KQRKQAAKRNKKPDYRQIQLPGLPDNPS-GWQEQLLRRIRGWLKRH 309 (310)
T ss_pred HHHHHHHHhccCCCceeEecCCCCCChh-hHHHHHHHHHHHHHHhh
Confidence 11 111111 2456666776666553 22233889999999865
No 161
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.71 E-value=4.3e-08 Score=72.00 Aligned_cols=86 Identities=16% Similarity=0.131 Sum_probs=50.7
Q ss_pred CCceEEEeCCCCCcccccHHHHHHHhhc---cceEEeecCCCCCCCCCCCCCCChHHH----HHHHHHHHHHhCC--Cce
Q 024228 44 KKHAVVLLHPFGFDGILTWQFQVLALAK---TYEVYVPDFLFFGSSVTDRPDRTASFQ----AECMAKGLRKLGV--EKC 114 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~---~~~v~~~d~~g~G~s~~~~~~~~~~~~----~~~~~~~l~~~~~--~~~ 114 (270)
+...||++||+.++.. .|..+...+.. .+.-..+...+..... .....+++.. ++++.+.++.... .++
T Consensus 3 ~~hLvV~vHGL~G~~~-d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~-~~T~~gI~~~g~rL~~eI~~~~~~~~~~~~~I 80 (217)
T PF05057_consen 3 PVHLVVFVHGLWGNPA-DMRYLKNHLEKIPEDLPNARIVVLGYSNNE-FKTFDGIDVCGERLAEEILEHIKDYESKIRKI 80 (217)
T ss_pred CCEEEEEeCCCCCCHH-HHHHHHHHHHHhhhhcchhhhhhhcccccc-cccchhhHHHHHHHHHHHHHhccccccccccc
Confidence 4568999999999988 88877766655 2221122222221111 1112334433 4444444444443 489
Q ss_pred EEEEEchhHHHHHHHHh
Q 024228 115 TLVGVSYGGMVGFKMAE 131 (270)
Q Consensus 115 ~l~G~S~Gg~~a~~~a~ 131 (270)
.++|||+||.++-.+..
T Consensus 81 sfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 81 SFIGHSLGGLIARYALG 97 (217)
T ss_pred eEEEecccHHHHHHHHH
Confidence 99999999999866554
No 162
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=98.68 E-value=3.9e-06 Score=65.68 Aligned_cols=36 Identities=22% Similarity=0.268 Sum_probs=31.3
Q ss_pred ceEEEEEchhHHHHHHHHhhCccccccEEEecccCC
Q 024228 113 KCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMG 148 (270)
Q Consensus 113 ~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~ 148 (270)
|++++|+|.||++|...|.-.|-.+++++=-++...
T Consensus 185 p~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~~ 220 (403)
T PF11144_consen 185 PKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYAL 220 (403)
T ss_pred cEEEEecCcHHHHHHHHHhhCccceeEEEecCcccc
Confidence 899999999999999999999998998876665544
No 163
>PLN02606 palmitoyl-protein thioesterase
Probab=98.68 E-value=4.4e-06 Score=63.01 Aligned_cols=100 Identities=20% Similarity=0.125 Sum_probs=63.6
Q ss_pred CCceEEEeCCCCCccc-ccHHHHHHHhhc--cceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHH---hCCCceEEE
Q 024228 44 KKHAVVLLHPFGFDGI-LTWQFQVLALAK--TYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRK---LGVEKCTLV 117 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~-~~~~~~~~~l~~--~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~l~ 117 (270)
...|||+.||++.+.. .....+.+.+.+ .+.+.++. .|-+.. ..--....+.++.+.+.+.. +. +-+.++
T Consensus 25 ~~~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~-ig~~~~--~s~~~~~~~Qv~~vce~l~~~~~L~-~G~naI 100 (306)
T PLN02606 25 LSVPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVE-IGNGVQ--DSLFMPLRQQASIACEKIKQMKELS-EGYNIV 100 (306)
T ss_pred CCCCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEE-ECCCcc--cccccCHHHHHHHHHHHHhcchhhc-CceEEE
Confidence 3578999999994433 267777777752 34444443 232211 11113344444444444433 22 358999
Q ss_pred EEchhHHHHHHHHhhCcc--ccccEEEecccC
Q 024228 118 GVSYGGMVGFKMAEMYPD--LVESMVVTCSVM 147 (270)
Q Consensus 118 G~S~Gg~~a~~~a~~~p~--~v~~~i~~~~~~ 147 (270)
|+|.||.++-.++.+.|+ .|+.+|.++++-
T Consensus 101 GfSQGglflRa~ierc~~~p~V~nlISlggph 132 (306)
T PLN02606 101 AESQGNLVARGLIEFCDNAPPVINYVSLGGPH 132 (306)
T ss_pred EEcchhHHHHHHHHHCCCCCCcceEEEecCCc
Confidence 999999999999999876 499999998763
No 164
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.66 E-value=1.2e-07 Score=74.18 Aligned_cols=102 Identities=22% Similarity=0.115 Sum_probs=79.6
Q ss_pred CceEEEeCCCCCcccccHHHHHHHhhcc-ce---EEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEEc
Q 024228 45 KHAVVLLHPFGFDGILTWQFQVLALAKT-YE---VYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVS 120 (270)
Q Consensus 45 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~---v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~G~S 120 (270)
.-+++++||++.+.. .|..+...+... +. ++.+++++. +...+.....+++..-+.+++...+.+++.++|||
T Consensus 59 ~~pivlVhG~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~~~~~ql~~~V~~~l~~~ga~~v~LigHS 135 (336)
T COG1075 59 KEPIVLVHGLGGGYG-NFLPLDYRLAILGWLTNGVYAFELSGG--DGTYSLAVRGEQLFAYVDEVLAKTGAKKVNLIGHS 135 (336)
T ss_pred CceEEEEccCcCCcc-hhhhhhhhhcchHHHhccccccccccc--CCCccccccHHHHHHHHHHHHhhcCCCceEEEeec
Confidence 458999999987777 888877666665 55 888888755 22223335566667777778888888999999999
Q ss_pred hhHHHHHHHHhhCc--cccccEEEecccCCC
Q 024228 121 YGGMVGFKMAEMYP--DLVESMVVTCSVMGL 149 (270)
Q Consensus 121 ~Gg~~a~~~a~~~p--~~v~~~i~~~~~~~~ 149 (270)
+||..+..++...+ .+|+.++.++++-..
T Consensus 136 ~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~G 166 (336)
T COG1075 136 MGGLDSRYYLGVLGGANRVASVVTLGTPHHG 166 (336)
T ss_pred ccchhhHHHHhhcCccceEEEEEEeccCCCC
Confidence 99999999998887 789999999887543
No 165
>PLN02209 serine carboxypeptidase
Probab=98.63 E-value=1.2e-05 Score=65.13 Aligned_cols=125 Identities=16% Similarity=0.097 Sum_probs=78.8
Q ss_pred eEEEeec--CCeEEEEEecCC---CCCCceEEEeCCCCCcccccHHHHHH----------------H-------hhccce
Q 024228 23 QRTIEIE--PGTILNIWVPKK---TTKKHAVVLLHPFGFDGILTWQFQVL----------------A-------LAKTYE 74 (270)
Q Consensus 23 ~~~i~~~--~g~~l~~~~~~~---~~~~~~vv~~hG~~~~~~~~~~~~~~----------------~-------l~~~~~ 74 (270)
..++.+. .+..+.||...+ +...|.++++.|++|++. .+..+.+ . ..+..+
T Consensus 41 sGy~~v~~~~~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS-~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~an 119 (437)
T PLN02209 41 TGYIGIGEEENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSC-LSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTAN 119 (437)
T ss_pred EEEEEecCCCCeEEEEEEEecCCCCCCCCEEEEECCCCcHHH-hhhHHHhcCCceeccCCCCCCcccceeCCCchhhcCc
Confidence 4455664 356777765432 245799999999998877 5533210 1 122378
Q ss_pred EEeecC-CCCCCCCCCCC--CCChHHHHHHHHHHHHHh-------CCCceEEEEEchhHHHHHHHHhh----C------c
Q 024228 75 VYVPDF-LFFGSSVTDRP--DRTASFQAECMAKGLRKL-------GVEKCTLVGVSYGGMVGFKMAEM----Y------P 134 (270)
Q Consensus 75 v~~~d~-~g~G~s~~~~~--~~~~~~~~~~~~~~l~~~-------~~~~~~l~G~S~Gg~~a~~~a~~----~------p 134 (270)
++.+|. .|.|.|..... ..+.+..++++.+++..+ ...+++|.|.|+||..+-.+|.. . +
T Consensus 120 llfiDqPvGtGfSy~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~ 199 (437)
T PLN02209 120 IIFLDQPVGSGFSYSKTPIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPP 199 (437)
T ss_pred EEEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCc
Confidence 999995 58898864332 123334456666666553 23589999999999876666543 1 1
Q ss_pred cccccEEEecccCC
Q 024228 135 DLVESMVVTCSVMG 148 (270)
Q Consensus 135 ~~v~~~i~~~~~~~ 148 (270)
-.++++++.++...
T Consensus 200 inl~Gi~igng~td 213 (437)
T PLN02209 200 INLQGYVLGNPITH 213 (437)
T ss_pred eeeeeEEecCcccC
Confidence 14678888887654
No 166
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=98.58 E-value=1.2e-06 Score=63.00 Aligned_cols=81 Identities=16% Similarity=0.224 Sum_probs=54.1
Q ss_pred CCceEEEeCCCCCcccccHHHHHHHhhccce-EEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEEchh
Q 024228 44 KKHAVVLLHPFGFDGILTWQFQVLALAKTYE-VYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVSYG 122 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~-v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~G~S~G 122 (270)
++..|||+.|++.+.. .+..+. +.+.+. ++++|||..-. +. | + -+.+.+.|+|+|||
T Consensus 10 ~~~LilfF~GWg~d~~-~f~hL~--~~~~~D~l~~yDYr~l~~--------d~-----~----~--~~y~~i~lvAWSmG 67 (213)
T PF04301_consen 10 GKELILFFAGWGMDPS-PFSHLI--LPENYDVLICYDYRDLDF--------DF-----D----L--SGYREIYLVAWSMG 67 (213)
T ss_pred CCeEEEEEecCCCChH-Hhhhcc--CCCCccEEEEecCccccc--------cc-----c----c--ccCceEEEEEEeHH
Confidence 3679999999999887 554432 233433 57788873211 10 1 1 24579999999999
Q ss_pred HHHHHHHHhhCccccccEEEecccCC
Q 024228 123 GMVGFKMAEMYPDLVESMVVTCSVMG 148 (270)
Q Consensus 123 g~~a~~~a~~~p~~v~~~i~~~~~~~ 148 (270)
-.+|..+....| ++..|.+++...
T Consensus 68 Vw~A~~~l~~~~--~~~aiAINGT~~ 91 (213)
T PF04301_consen 68 VWAANRVLQGIP--FKRAIAINGTPY 91 (213)
T ss_pred HHHHHHHhccCC--cceeEEEECCCC
Confidence 999988866543 677777776543
No 167
>PLN02633 palmitoyl protein thioesterase family protein
Probab=98.57 E-value=1e-05 Score=61.18 Aligned_cols=100 Identities=19% Similarity=0.176 Sum_probs=64.8
Q ss_pred CCceEEEeCCCCCccc-ccHHHHHHHhhcc--ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHH---hCCCceEEE
Q 024228 44 KKHAVVLLHPFGFDGI-LTWQFQVLALAKT--YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRK---LGVEKCTLV 117 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~-~~~~~~~~~l~~~--~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~l~ 117 (270)
...|+|+.||+|.+.. .....+.+.+.+. ..+.++.. |.+....--....+.++.+.+.+.. +. +-+.++
T Consensus 24 ~~~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i---g~~~~~s~~~~~~~Qve~vce~l~~~~~l~-~G~naI 99 (314)
T PLN02633 24 VSVPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI---GNGVGDSWLMPLTQQAEIACEKVKQMKELS-QGYNIV 99 (314)
T ss_pred CCCCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE---CCCccccceeCHHHHHHHHHHHHhhchhhh-CcEEEE
Confidence 3568999999998766 2344455555433 55555543 3332111123444445555444443 22 359999
Q ss_pred EEchhHHHHHHHHhhCcc--ccccEEEecccC
Q 024228 118 GVSYGGMVGFKMAEMYPD--LVESMVVTCSVM 147 (270)
Q Consensus 118 G~S~Gg~~a~~~a~~~p~--~v~~~i~~~~~~ 147 (270)
|+|.||.++-.++.+.|+ .|+.+|.++++-
T Consensus 100 GfSQGGlflRa~ierc~~~p~V~nlISlggph 131 (314)
T PLN02633 100 GRSQGNLVARGLIEFCDGGPPVYNYISLAGPH 131 (314)
T ss_pred EEccchHHHHHHHHHCCCCCCcceEEEecCCC
Confidence 999999999999999986 599999998763
No 168
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.56 E-value=6.2e-07 Score=68.52 Aligned_cols=106 Identities=15% Similarity=0.146 Sum_probs=68.1
Q ss_pred CCCceEEEeCCCCCcccccHHHHHHHhhcc---ceEEeecCCCCCCCCCCCCC-CChHHHHHHHHHHHHHh----CCCce
Q 024228 43 TKKHAVVLLHPFGFDGILTWQFQVLALAKT---YEVYVPDFLFFGSSVTDRPD-RTASFQAECMAKGLRKL----GVEKC 114 (270)
Q Consensus 43 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~---~~v~~~d~~g~G~s~~~~~~-~~~~~~~~~~~~~l~~~----~~~~~ 114 (270)
..+..+||+||+..+-...-.++++-.... ...+.+.+|..|.--.-..+ .+...-..++..+|+.+ ..+++
T Consensus 114 ~~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~~~I 193 (377)
T COG4782 114 SAKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPVKRI 193 (377)
T ss_pred CCCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCCceE
Confidence 457899999999876553333344333322 77888999976653221111 22233344555555544 46789
Q ss_pred EEEEEchhHHHHHHHHhhC--------ccccccEEEecccCC
Q 024228 115 TLVGVSYGGMVGFKMAEMY--------PDLVESMVVTCSVMG 148 (270)
Q Consensus 115 ~l~G~S~Gg~~a~~~a~~~--------p~~v~~~i~~~~~~~ 148 (270)
+|++||||.++++.+..+. +.+++-+|+.+|-.+
T Consensus 194 ~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD 235 (377)
T COG4782 194 YLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDID 235 (377)
T ss_pred EEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCC
Confidence 9999999999998877642 346888888777554
No 169
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=98.55 E-value=2.7e-05 Score=62.80 Aligned_cols=126 Identities=14% Similarity=0.033 Sum_probs=82.3
Q ss_pred eeEEEeec--CCeEEEEEecCC---CCCCceEEEeCCCCCcccccHHHHHHH-------------------hhccceEEe
Q 024228 22 TQRTIEIE--PGTILNIWVPKK---TTKKHAVVLLHPFGFDGILTWQFQVLA-------------------LAKTYEVYV 77 (270)
Q Consensus 22 ~~~~i~~~--~g~~l~~~~~~~---~~~~~~vv~~hG~~~~~~~~~~~~~~~-------------------l~~~~~v~~ 77 (270)
..-++.+. .+..++||...+ +..+|.||++.|++|++. .- .+... ..+..+++.
T Consensus 45 ysGYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSS-l~-G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLf 122 (454)
T KOG1282|consen 45 YSGYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSS-LG-GLFEENGPFRVKYNGKTLYLNPYSWNKEANILF 122 (454)
T ss_pred ccceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccc-hh-hhhhhcCCeEEcCCCCcceeCCccccccccEEE
Confidence 34567775 588998876544 245789999999999886 33 22211 112267888
Q ss_pred ecCC-CCCCCCCCCCC---CChHHHHHHHHHHHHHh-------CCCceEEEEEchhHHHHHHHHhh----C-----c-cc
Q 024228 78 PDFL-FFGSSVTDRPD---RTASFQAECMAKGLRKL-------GVEKCTLVGVSYGGMVGFKMAEM----Y-----P-DL 136 (270)
Q Consensus 78 ~d~~-g~G~s~~~~~~---~~~~~~~~~~~~~l~~~-------~~~~~~l~G~S~Gg~~a~~~a~~----~-----p-~~ 136 (270)
+|.| |.|.|-..... .+.+..++|...++... ...+++|.|-|++|...-.+|.. + | -.
T Consensus 123 Ld~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iN 202 (454)
T KOG1282|consen 123 LDQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNIN 202 (454)
T ss_pred EecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCccc
Confidence 9987 78888644431 34555566666555442 34689999999999777666653 2 1 24
Q ss_pred cccEEEecccCCC
Q 024228 137 VESMVVTCSVMGL 149 (270)
Q Consensus 137 v~~~i~~~~~~~~ 149 (270)
++|+++-+|....
T Consensus 203 LkG~~IGNg~td~ 215 (454)
T KOG1282|consen 203 LKGYAIGNGLTDP 215 (454)
T ss_pred ceEEEecCcccCc
Confidence 7888887776553
No 170
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=98.54 E-value=6.1e-05 Score=61.10 Aligned_cols=126 Identities=16% Similarity=0.053 Sum_probs=77.6
Q ss_pred eeEEEeecC--CeEEEEEecCC---CCCCceEEEeCCCCCcccccHHHHH---H-------------Hh-------hccc
Q 024228 22 TQRTIEIEP--GTILNIWVPKK---TTKKHAVVLLHPFGFDGILTWQFQV---L-------------AL-------AKTY 73 (270)
Q Consensus 22 ~~~~i~~~~--g~~l~~~~~~~---~~~~~~vv~~hG~~~~~~~~~~~~~---~-------------~l-------~~~~ 73 (270)
..-++++.+ +..++||...+ +...|.|+++.|++|++. .+..+. + .+ .+..
T Consensus 38 ~sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS-~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~a 116 (433)
T PLN03016 38 ETGYIGIGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSC-LGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKMA 116 (433)
T ss_pred EEEEEEecCCCCeEEEEEEEecCCCcccCCEEEEEcCCCcHHH-HHHHHHhcCCceeeccccCCCCCceeeCCCchhhcC
Confidence 355666643 56777765433 245799999999988776 332211 1 11 2237
Q ss_pred eEEeecC-CCCCCCCCCCCC--CChHHHHHHHHHHHHHh-------CCCceEEEEEchhHHHHHHHHhh----C------
Q 024228 74 EVYVPDF-LFFGSSVTDRPD--RTASFQAECMAKGLRKL-------GVEKCTLVGVSYGGMVGFKMAEM----Y------ 133 (270)
Q Consensus 74 ~v~~~d~-~g~G~s~~~~~~--~~~~~~~~~~~~~l~~~-------~~~~~~l~G~S~Gg~~a~~~a~~----~------ 133 (270)
+++.+|. -|.|.|...... .+-+..++++..++..+ ...+++|.|.|+||..+-.+|.. .
T Consensus 117 nllfiDqPvGtGfSy~~~~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~ 196 (433)
T PLN03016 117 NIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEP 196 (433)
T ss_pred cEEEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCC
Confidence 8999994 589998644322 11122335555555442 34589999999999877666553 1
Q ss_pred ccccccEEEecccCC
Q 024228 134 PDLVESMVVTCSVMG 148 (270)
Q Consensus 134 p~~v~~~i~~~~~~~ 148 (270)
+-.++++++-+|...
T Consensus 197 ~inLkGi~iGNg~t~ 211 (433)
T PLN03016 197 PINLQGYMLGNPVTY 211 (433)
T ss_pred cccceeeEecCCCcC
Confidence 124788888887653
No 171
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.53 E-value=5.3e-06 Score=59.00 Aligned_cols=102 Identities=14% Similarity=0.044 Sum_probs=75.0
Q ss_pred CceEEEeCCCCCccc--ccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCC----CceEEE
Q 024228 45 KHAVVLLHPFGFDGI--LTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGV----EKCTLV 117 (270)
Q Consensus 45 ~~~vv~~hG~~~~~~--~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~l~ 117 (270)
+..|||+-|.+..-- ..-..+...|.+. |.++-+.++.+- ...+..++.+-++|+..++++++. ..++|+
T Consensus 36 ~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy---~G~Gt~slk~D~edl~~l~~Hi~~~~fSt~vVL~ 112 (299)
T KOG4840|consen 36 SVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSY---NGYGTFSLKDDVEDLKCLLEHIQLCGFSTDVVLV 112 (299)
T ss_pred EEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeeccccc---cccccccccccHHHHHHHHHHhhccCcccceEEE
Confidence 467889988876443 3556677888887 999999876321 112335677778999999998753 279999
Q ss_pred EEchhHHHHHHHHhh--CccccccEEEecccCCC
Q 024228 118 GVSYGGMVGFKMAEM--YPDLVESMVVTCSVMGL 149 (270)
Q Consensus 118 G~S~Gg~~a~~~a~~--~p~~v~~~i~~~~~~~~ 149 (270)
|||.|+.-.+.|... .+..+.+.|+.+|..+.
T Consensus 113 GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSDr 146 (299)
T KOG4840|consen 113 GHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSDR 146 (299)
T ss_pred ecCccchHHHHHHHhccchHHHHHHHHhCccchh
Confidence 999999988888733 35578888988887653
No 172
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=98.51 E-value=2.1e-06 Score=70.19 Aligned_cols=115 Identities=17% Similarity=0.145 Sum_probs=72.9
Q ss_pred EEEEEecCC--CCCCceEEEeCCCCCcccccH--HHHHHHhhcc--ceEEeecCCCCCCCCCCC-------CCCChHHHH
Q 024228 33 ILNIWVPKK--TTKKHAVVLLHPFGFDGILTW--QFQVLALAKT--YEVYVPDFLFFGSSVTDR-------PDRTASFQA 99 (270)
Q Consensus 33 ~l~~~~~~~--~~~~~~vv~~hG~~~~~~~~~--~~~~~~l~~~--~~v~~~d~~g~G~s~~~~-------~~~~~~~~~ 99 (270)
+.+|+.... .+++|.+|++-|= +.....+ ..+...|+++ -.++++++|.+|.|.+.. ...+.++..
T Consensus 15 ~qRY~~n~~~~~~~gpifl~~ggE-~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QAL 93 (434)
T PF05577_consen 15 SQRYWVNDQYYKPGGPIFLYIGGE-GPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQAL 93 (434)
T ss_dssp EEEEEEE-TT--TTSEEEEEE--S-S-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHH
T ss_pred EEEEEEEhhhcCCCCCEEEEECCC-CccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHH
Confidence 345655433 2346666666543 3333122 2345667776 789999999999997532 236788889
Q ss_pred HHHHHHHHHhC-------CCceEEEEEchhHHHHHHHHhhCccccccEEEecccCC
Q 024228 100 ECMAKGLRKLG-------VEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMG 148 (270)
Q Consensus 100 ~~~~~~l~~~~-------~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~ 148 (270)
+|+..+++++. ..|++++|-|+||.+|..+-.++|+.|.+.+..+++..
T Consensus 94 aD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~ 149 (434)
T PF05577_consen 94 ADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQ 149 (434)
T ss_dssp HHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CC
T ss_pred HHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceee
Confidence 99998887763 23799999999999999999999999999998887754
No 173
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=98.51 E-value=3.4e-06 Score=69.01 Aligned_cols=237 Identities=14% Similarity=0.072 Sum_probs=124.4
Q ss_pred ceeEEEeecCCeEEEEEe-cCC----CCCCceEEEeCCCCCccc-ccHHHHHHHhhcc-ceEEeecCCCCCCCCCC---C
Q 024228 21 MTQRTIEIEPGTILNIWV-PKK----TTKKHAVVLLHPFGFDGI-LTWQFQVLALAKT-YEVYVPDFLFFGSSVTD---R 90 (270)
Q Consensus 21 ~~~~~i~~~~g~~l~~~~-~~~----~~~~~~vv~~hG~~~~~~-~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~---~ 90 (270)
.++..+..+||..+.... ... .+++|.+|..+|.-+-+- ..|..-...|.+. +-....|.||=|.-... .
T Consensus 441 ~~r~~~~SkDGt~VPM~Iv~kk~~k~dg~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~~WHk~ 520 (712)
T KOG2237|consen 441 VERIEVSSKDGTKVPMFIVYKKDIKLDGSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGEQWHKD 520 (712)
T ss_pred EEEEEEecCCCCccceEEEEechhhhcCCCceEEEEecccceeeccccccceeEEEecceEEEEEeeccCcccccchhhc
Confidence 456667777998664211 111 236787877777554332 3444333333445 66777788986644321 1
Q ss_pred -----CCCChHHHHHHHHHHHHH--hCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccc
Q 024228 91 -----PDRTASFQAECMAKGLRK--LGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGY 163 (270)
Q Consensus 91 -----~~~~~~~~~~~~~~~l~~--~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~ 163 (270)
...+++++......+++. ...++..+.|.|.||.++..++..+|+.+.++|+--|+.+.-........ .
T Consensus 521 G~lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~VpfmDvL~t~~~til----p 596 (712)
T KOG2237|consen 521 GRLAKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFMDVLNTHKDTIL----P 596 (712)
T ss_pred cchhhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCchHhhhhhhcCcceehhhhhccCcc----c
Confidence 124555555555555543 23468999999999999999999999999999887776553221111110 0
Q ss_pred hhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHH----HHHHhcC------CceE
Q 024228 164 ESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARN----LKEQVGQ------NATM 233 (270)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~----~~~~~~~------~~~~ 233 (270)
.....+-..........+.....+..-..+... ....-+|+..+.+|.-|++..... ++..... ..-+
T Consensus 597 lt~sd~ee~g~p~~~~~~~~i~~y~pv~~i~~q--~~YPS~lvtta~hD~RV~~~~~~K~vAklre~~~~~~~q~~pvll 674 (712)
T KOG2237|consen 597 LTTSDYEEWGNPEDFEDLIKISPYSPVDNIKKQ--VQYPSMLVTTADHDDRVGPLESLKWVAKLREATCDSLKQTNPVLL 674 (712)
T ss_pred cchhhhcccCChhhhhhhheecccCccCCCchh--ccCcceEEeeccCCCcccccchHHHHHHHHHHhhcchhcCCCEEE
Confidence 000111111222223333322222221111110 012568899999987665543333 3333321 2346
Q ss_pred EEecCCCcceeecchHhHH--HHHHHHHHhhh
Q 024228 234 ESIEKAGHLVNLERPFVYN--RQLKTILASLV 263 (270)
Q Consensus 234 ~~~~~~gH~~~~~~~~~~~--~~i~~fl~~~~ 263 (270)
.+-.++||..--...+.+. .....||.+..
T Consensus 675 ~i~~~agH~~~~~~~k~~~E~a~~yaFl~K~~ 706 (712)
T KOG2237|consen 675 RIETKAGHGAEKPRFKQIEEAAFRYAFLAKML 706 (712)
T ss_pred EEecCCccccCCchHHHHHHHHHHHHHHHHHh
Confidence 6678999987432222221 33445665543
No 174
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=98.51 E-value=7.8e-07 Score=72.60 Aligned_cols=126 Identities=15% Similarity=0.112 Sum_probs=87.3
Q ss_pred eEEEeecCCeEEEE--EecCCCCCCceEEEeC--CCCCccccc--HHHHHH---Hhhcc-ceEEeecCCCCCCCCCCCCC
Q 024228 23 QRTIEIEPGTILNI--WVPKKTTKKHAVVLLH--PFGFDGILT--WQFQVL---ALAKT-YEVYVPDFLFFGSSVTDRPD 92 (270)
Q Consensus 23 ~~~i~~~~g~~l~~--~~~~~~~~~~~vv~~h--G~~~~~~~~--~~~~~~---~l~~~-~~v~~~d~~g~G~s~~~~~~ 92 (270)
...|...||++|+. |.+....+.|+++..+ ...-..... -....+ .++.+ |.|+..|.||.|.|++....
T Consensus 21 ~v~V~MRDGvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~SeG~~~~ 100 (563)
T COG2936 21 DVMVPMRDGVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSEGVFDP 100 (563)
T ss_pred eeeEEecCCeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCCcccce
Confidence 35566779999975 5555446678888888 322221101 112233 45555 99999999999999976544
Q ss_pred C-C-hHHHHHHHHHHHHHhC--CCceEEEEEchhHHHHHHHHhhCccccccEEEecccCC
Q 024228 93 R-T-ASFQAECMAKGLRKLG--VEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMG 148 (270)
Q Consensus 93 ~-~-~~~~~~~~~~~l~~~~--~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~ 148 (270)
. + ..+-..|+.++|.+.. ..++..+|.|++|...+.+|+..|..+++++...+..+
T Consensus 101 ~~~~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D 160 (563)
T COG2936 101 ESSREAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVD 160 (563)
T ss_pred eccccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeecccccccc
Confidence 2 2 2223446666666653 35899999999999999999999888999988777654
No 175
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.49 E-value=5.8e-06 Score=60.39 Aligned_cols=209 Identities=13% Similarity=0.075 Sum_probs=111.7
Q ss_pred CceEEEeCCCCCcccccHHH--HHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHH----HHHH----------
Q 024228 45 KHAVVLLHPFGFDGILTWQF--QVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMA----KGLR---------- 107 (270)
Q Consensus 45 ~~~vv~~hG~~~~~~~~~~~--~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~----~~l~---------- 107 (270)
++.-+.+-|-+... +.+. +..-+.++ ...+.+.-|-+|+..++..-...-..+.|+. +.|+
T Consensus 113 ~~KOG~~a~tgdh~--y~rr~~L~~p~~k~~i~tmvle~pfYgqr~p~~q~~~~Le~vtDlf~mG~A~I~E~~~lf~Ws~ 190 (371)
T KOG1551|consen 113 ADLCLSWALTGDHV--YTRRLVLSKPINKREIATMVLEKPFYGQRVPEEQIIHMLEYVTDLFKMGRATIQEFVKLFTWSS 190 (371)
T ss_pred CCeeEEEeecCCce--eEeeeeecCchhhhcchheeeecccccccCCHHHHHHHHHHHHHHHHhhHHHHHHHHHhccccc
Confidence 44445555544443 3333 23334444 8888889998988765432222222222321 1222
Q ss_pred HhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhh-------ccc----hhhhhhcc-----
Q 024228 108 KLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALER-------IGY----ESWVDFLL----- 171 (270)
Q Consensus 108 ~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~-------~~~----~~~~~~~~----- 171 (270)
..+..++.++|.||||.+|..+...++..|.-+-++++.... .......+.. ... ........
T Consensus 191 ~~g~g~~~~~g~Smgg~~a~~vgS~~q~Pva~~p~l~~~~as-vs~teg~l~~~~s~~~~~~~~t~~~~~~~r~p~Q~~~ 269 (371)
T KOG1551|consen 191 ADGLGNLNLVGRSMGGDIANQVGSLHQKPVATAPCLNSSKAS-VSATEGLLLQDTSKMKRFNQTTNKSGYTSRNPAQSYH 269 (371)
T ss_pred ccCcccceeeeeecccHHHHhhcccCCCCccccccccccccc-hhhhhhhhhhhhHHHHhhccCcchhhhhhhCchhhHH
Confidence 235679999999999999999988776545444333332111 0000000000 000 00000000
Q ss_pred -------cccHHHHHHHHHhhhhcCCCChhhhhhhhhee-----eeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCC
Q 024228 172 -------PKTADALKVQFDIACYKLPTLPAFVYKHILEK-----IHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKA 239 (270)
Q Consensus 172 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-----~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (270)
.+.......++..... .-..+..+.+| +.++.+++|..+|......+++..| ++++..++ +
T Consensus 270 ~~~~~~srn~~~E~~~~Mr~vmd-----~~T~v~~fp~Pvdpsl~ivv~A~~D~Yipr~gv~~lQ~~WP-g~eVr~~e-g 342 (371)
T KOG1551|consen 270 LLSKEQSRNSRKESLIFMRGVMD-----ECTHVANFPVPVDPSLIIVVQAKEDAYIPRTGVRSLQEIWP-GCEVRYLE-G 342 (371)
T ss_pred HHHHHhhhcchHHHHHHHHHHHH-----hhchhhcCCCCCCCCeEEEEEecCCccccccCcHHHHHhCC-CCEEEEee-c
Confidence 0000001111100000 00011112233 5778899999999988899999998 99999999 5
Q ss_pred Ccceee-cchHhHHHHHHHHHHhhh
Q 024228 240 GHLVNL-ERPFVYNRQLKTILASLV 263 (270)
Q Consensus 240 gH~~~~-~~~~~~~~~i~~fl~~~~ 263 (270)
||.... -+.+.+.+.|.+-|++..
T Consensus 343 GHVsayl~k~dlfRR~I~d~L~R~~ 367 (371)
T KOG1551|consen 343 GHVSAYLFKQDLFRRAIVDGLDRLD 367 (371)
T ss_pred CceeeeehhchHHHHHHHHHHHhhh
Confidence 898644 667888899999888775
No 176
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=98.45 E-value=1.3e-05 Score=62.03 Aligned_cols=215 Identities=21% Similarity=0.163 Sum_probs=112.1
Q ss_pred CCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCC----------CCCCCCCChH--------HHHHHHHH
Q 024228 44 KKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSS----------VTDRPDRTAS--------FQAECMAK 104 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s----------~~~~~~~~~~--------~~~~~~~~ 104 (270)
.-|.+++.||+++... ........++.. +.++..+...+|.+ .......... ....+...
T Consensus 48 ~~p~v~~~h~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (299)
T COG1073 48 KLPAVVFLHGFGSSKE-QSLGYAVLLAEKGYRVLAGDASLFGESGGDPRGLADSEGYAEDFSAAVLLLLSEGVLDKDYRL 126 (299)
T ss_pred cCceEEeccCcccccc-CcchHHHHhhhceeEEeeeccccccccccccccccCccccccccchhheeeeccccccHHHHH
Confidence 4688999999999888 544466666666 77666664222222 2111111100 00111111
Q ss_pred HHHHhCCCceEEEEEchhHHHHHHHHhhCcc--ccccEEEecccCCCCchhh---------hHhhhhccchhhhhhcccc
Q 024228 105 GLRKLGVEKCTLVGVSYGGMVGFKMAEMYPD--LVESMVVTCSVMGLTESVS---------NAALERIGYESWVDFLLPK 173 (270)
Q Consensus 105 ~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~--~v~~~i~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~ 173 (270)
... ...+....|++.|+..+..++...+. ....++.++.......... ................ ..
T Consensus 127 ~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 203 (299)
T COG1073 127 LGA--SLGPRILAGLSLGGPSAGALLAWGPTRLDASRIVVWGESLGGALALLLLGANPELARELIDYLITPGGFAPL-PA 203 (299)
T ss_pred Hhh--hcCcceEEEEEeeccchHHHhhcchhHHHhhcccceeeccCceeeccccccchHHHHhhhhhhccCCCCCCC-Cc
Confidence 111 12578888999999888888877752 2333333332221111000 0000000000000000 00
Q ss_pred cHHHHHHHHHhhhhcCCCChhhhhhhhh-eeeeEEEcCCCccCCHHHHHHHHHHhcC-CceEEEecCCCcceeecchH--
Q 024228 174 TADALKVQFDIACYKLPTLPAFVYKHIL-EKIHLLWGENDKIFDMQVARNLKEQVGQ-NATMESIEKAGHLVNLERPF-- 249 (270)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~~~-- 249 (270)
..........................+. +|+|+++|.+|..+|...+..+.+.... ..+...+++++|........
T Consensus 204 ~~~~~~~~~~~~~~~~~~d~~~~~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~ 283 (299)
T COG1073 204 PEAPLDTLPLRAVLLLLLDPFDDAEKISPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAV 283 (299)
T ss_pred ccccccccccchhhhccCcchhhHhhcCCcceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCccHHH
Confidence 0000000000000011111222233333 7999999999999999999999998875 57888889999998864433
Q ss_pred -hHHHHHHHHHHhh
Q 024228 250 -VYNRQLKTILASL 262 (270)
Q Consensus 250 -~~~~~i~~fl~~~ 262 (270)
+..+.+.+|+.+.
T Consensus 284 ~~~~~~~~~f~~~~ 297 (299)
T COG1073 284 EQALDKLAEFLERH 297 (299)
T ss_pred HHHHHHHHHHHHHh
Confidence 6778888998764
No 177
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=98.45 E-value=1.2e-06 Score=72.98 Aligned_cols=119 Identities=18% Similarity=0.112 Sum_probs=72.5
Q ss_pred ecCCeEEEEEecCC---CCCCceEEEeCCCCCccc--ccHHHHHHHhhc--c-ceEEeecCC-C---CCCCCCC--CCCC
Q 024228 28 IEPGTILNIWVPKK---TTKKHAVVLLHPFGFDGI--LTWQFQVLALAK--T-YEVYVPDFL-F---FGSSVTD--RPDR 93 (270)
Q Consensus 28 ~~~g~~l~~~~~~~---~~~~~~vv~~hG~~~~~~--~~~~~~~~~l~~--~-~~v~~~d~~-g---~G~s~~~--~~~~ 93 (270)
.+|...+.++.+.. .++.|+||++||++.... ..+ ....|.. . +.|+++++| | +..+... ....
T Consensus 75 sEdcl~l~i~~p~~~~~~~~~pv~v~ihGG~~~~g~~~~~--~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~~~~n~ 152 (493)
T cd00312 75 SEDCLYLNVYTPKNTKPGNSLPVMVWIHGGGFMFGSGSLY--PGDGLAREGDNVIVVSINYRLGVLGFLSTGDIELPGNY 152 (493)
T ss_pred CCcCCeEEEEeCCCCCCCCCCCEEEEEcCCccccCCCCCC--ChHHHHhcCCCEEEEEecccccccccccCCCCCCCcch
Confidence 34778888888754 245699999999763322 021 1222322 2 899999999 3 2222211 1122
Q ss_pred ChHHH---HHHHHHHHHHhC--CCceEEEEEchhHHHHHHHHhh--CccccccEEEecccCC
Q 024228 94 TASFQ---AECMAKGLRKLG--VEKCTLVGVSYGGMVGFKMAEM--YPDLVESMVVTCSVMG 148 (270)
Q Consensus 94 ~~~~~---~~~~~~~l~~~~--~~~~~l~G~S~Gg~~a~~~a~~--~p~~v~~~i~~~~~~~ 148 (270)
...+. .+.+.+-++.++ .++|.|+|+|.||..+..++.. .+..++++|+.++...
T Consensus 153 g~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 153 GLKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred hHHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 23333 333444444554 4589999999999998877765 2446888888876543
No 178
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=98.41 E-value=4.3e-05 Score=63.19 Aligned_cols=221 Identities=13% Similarity=0.091 Sum_probs=115.5
Q ss_pred eeEEEeecCCeEEEE---EecC--CCCCCceEEEeCCCCCccc-ccHHHHHHHhhcc-ceEEeecCCCCCCCCCC-----
Q 024228 22 TQRTIEIEPGTILNI---WVPK--KTTKKHAVVLLHPFGFDGI-LTWQFQVLALAKT-YEVYVPDFLFFGSSVTD----- 89 (270)
Q Consensus 22 ~~~~i~~~~g~~l~~---~~~~--~~~~~~~vv~~hG~~~~~~-~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~----- 89 (270)
+...++..||.++-+ +... ...+.|.+|.--|.-+... ..|....-.|.++ +-.-..-.||=|+-...
T Consensus 420 ~riwa~a~dgv~VPVSLvyrkd~~~~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~WYe~G 499 (682)
T COG1770 420 RRIWATADDGVQVPVSLVYRKDTKLDGSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRAWYEDG 499 (682)
T ss_pred EEEEEEcCCCcEeeEEEEEecccCCCCCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccChHHHHhh
Confidence 344455568887643 2211 2345677777666444333 3444333334444 33333345665443221
Q ss_pred ---CCCCChHHHHHHHHHHHHHh--CCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhccch
Q 024228 90 ---RPDRTASFQAECMAKGLRKL--GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYE 164 (270)
Q Consensus 90 ---~~~~~~~~~~~~~~~~l~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~ 164 (270)
....++.++.+....+++.= ..+.++++|-|.||++....+...|+.++++|+--|+.+.-..+....+ .+...
T Consensus 500 K~l~K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVDvltTMlD~sl-PLT~~ 578 (682)
T COG1770 500 KLLNKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVDVLTTMLDPSL-PLTVT 578 (682)
T ss_pred hhhhccccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCccchhhhhcCCCC-CCCcc
Confidence 12356666666665555542 2457999999999999999999999999999998887764333222111 11111
Q ss_pred hhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc---CCce---EEEecC
Q 024228 165 SWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG---QNAT---MESIEK 238 (270)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~---~~~~~~ 238 (270)
.+..+-.+.......-+.+...+.. .-++-..|+|++.|.+|+.|..-...++..++. .+.. +..=-+
T Consensus 579 E~~EWGNP~d~e~y~yikSYSPYdN------V~a~~YP~ilv~~Gl~D~rV~YwEpAKWvAkLR~~~td~~plLlkt~M~ 652 (682)
T COG1770 579 EWDEWGNPLDPEYYDYIKSYSPYDN------VEAQPYPAILVTTGLNDPRVQYWEPAKWVAKLRELKTDGNPLLLKTNMD 652 (682)
T ss_pred chhhhCCcCCHHHHHHHhhcCchhc------cccCCCCceEEEccccCCccccchHHHHHHHHhhcccCCCcEEEEeccc
Confidence 2222222332221111111111111 011122789999999999886544444444433 1221 222246
Q ss_pred CCcceeecchH
Q 024228 239 AGHLVNLERPF 249 (270)
Q Consensus 239 ~gH~~~~~~~~ 249 (270)
+||...-...+
T Consensus 653 aGHgG~SgRf~ 663 (682)
T COG1770 653 AGHGGASGRFQ 663 (682)
T ss_pred ccCCCCCCchH
Confidence 89976554443
No 179
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=98.37 E-value=2e-06 Score=55.03 Aligned_cols=62 Identities=18% Similarity=0.221 Sum_probs=54.8
Q ss_pred eeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHHhhhh
Q 024228 202 EKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILASLVH 264 (270)
Q Consensus 202 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~ 264 (270)
.|+|++.++.|+..|.+.++.+++.++ +.+++.+++.||........-+.+.+.+||..-.-
T Consensus 35 ~piL~l~~~~Dp~TP~~~a~~~~~~l~-~s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~G~l 96 (103)
T PF08386_consen 35 PPILVLGGTHDPVTPYEGARAMAARLP-GSRLVTVDGAGHGVYAGGSPCVDKAVDDYLLDGTL 96 (103)
T ss_pred CCEEEEecCcCCCCcHHHHHHHHHHCC-CceEEEEeccCcceecCCChHHHHHHHHHHHcCCC
Confidence 799999999999999999999999998 79999999999999864446678889999986543
No 180
>KOG3101 consensus Esterase D [General function prediction only]
Probab=98.35 E-value=4.3e-06 Score=58.95 Aligned_cols=193 Identities=15% Similarity=0.159 Sum_probs=104.9
Q ss_pred EEEEecCCC-C--CCceEEEeCCCCCcccccHHH--HH-HHhhcc-ceEEeecC--CCC---CCCCCCCC--------CC
Q 024228 34 LNIWVPKKT-T--KKHAVVLLHPFGFDGILTWQF--QV-LALAKT-YEVYVPDF--LFF---GSSVTDRP--------DR 93 (270)
Q Consensus 34 l~~~~~~~~-~--~~~~vv~~hG~~~~~~~~~~~--~~-~~l~~~-~~v~~~d~--~g~---G~s~~~~~--------~~ 93 (270)
..++.+... . .-|++.++.|+..+.. .+.. -. +.-+++ +.|+.+|- ||. |+++.... +-
T Consensus 30 f~vylPp~a~~~k~~P~lf~LSGLTCT~~-Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvnA 108 (283)
T KOG3101|consen 30 FGVYLPPDAPRGKRCPVLFYLSGLTCTHE-NFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVNA 108 (283)
T ss_pred EEEecCCCcccCCcCceEEEecCCcccch-hhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCceeEEec
Confidence 344555432 2 2478999999998887 5432 12 333444 88899985 443 22221110 01
Q ss_pred Ch----------HHHHHHHHHHHHH----hCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhh
Q 024228 94 TA----------SFQAECMAKGLRK----LGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALE 159 (270)
Q Consensus 94 ~~----------~~~~~~~~~~l~~----~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~ 159 (270)
+. +...+.+.+++.. ++..++.+.||||||.-|+..+.++|.+.+.+-..+|...+..-....
T Consensus 109 t~epw~~~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP~~cpWGq--- 185 (283)
T KOG3101|consen 109 TQEPWAKHYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNPINCPWGQ--- 185 (283)
T ss_pred ccchHhhhhhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccccCcccCcchH---
Confidence 11 2234455555542 244579999999999999999999999999988888876543211111
Q ss_pred hccchhhhhhcccccHHHHHHHHHhhhhcCCCChhhhhhhhh---eeeeEEEcCCCccCCHHH-HHHHHHHhc----CCc
Q 024228 160 RIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHIL---EKIHLLWGENDKIFDMQV-ARNLKEQVG----QNA 231 (270)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~P~l~i~g~~D~~~~~~~-~~~~~~~~~----~~~ 231 (270)
..+..+ .......+.. +....++..+. .-+||=.|+.|.+..... -+.+.+... ...
T Consensus 186 ----KAf~gY-LG~~ka~W~~----------yDat~lik~y~~~~~~ilIdqG~~D~Fl~~qLlPe~l~~a~~~~~~~~v 250 (283)
T KOG3101|consen 186 ----KAFTGY-LGDNKAQWEA----------YDATHLIKNYRGVGDDILIDQGAADNFLAEQLLPENLLEACKATWQAPV 250 (283)
T ss_pred ----HHhhcc-cCCChHHHhh----------cchHHHHHhcCCCCccEEEecCccchhhhhhcChHHHHHHhhccccccE
Confidence 000111 1111111111 11111222222 457888999999876221 122333322 134
Q ss_pred eEEEecCCCcceee
Q 024228 232 TMESIEKAGHLVNL 245 (270)
Q Consensus 232 ~~~~~~~~gH~~~~ 245 (270)
.+...+|-.|....
T Consensus 251 ~~r~~~gyDHSYyf 264 (283)
T KOG3101|consen 251 VFRLQEGYDHSYYF 264 (283)
T ss_pred EEEeecCCCcceee
Confidence 56677888887754
No 181
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.29 E-value=1.3e-05 Score=67.23 Aligned_cols=123 Identities=14% Similarity=0.072 Sum_probs=68.5
Q ss_pred eEEEeecCCeEEEEEecCCC--------CCCceEEEeCCCCCcccccHHHHHHHhhc-----------------cceEEe
Q 024228 23 QRTIEIEPGTILNIWVPKKT--------TKKHAVVLLHPFGFDGILTWQFQVLALAK-----------------TYEVYV 77 (270)
Q Consensus 23 ~~~i~~~~g~~l~~~~~~~~--------~~~~~vv~~hG~~~~~~~~~~~~~~~l~~-----------------~~~v~~ 77 (270)
++.-+..+...++.|..|.. .++-||+|++|..|+.. ..+.++..... +++.++
T Consensus 59 ~r~t~~a~kY~LYLY~Egs~~~e~~~lelsGIPVLFIPGNAGSyK-QvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFa 137 (973)
T KOG3724|consen 59 ERLTPQADKYSLYLYREGSRWWERSTLELSGIPVLFIPGNAGSYK-QVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFA 137 (973)
T ss_pred ccccCCCCceEEEEecccccccccccccCCCceEEEecCCCCchH-HHHHHHHHHhhhhcCCchhhhhcccCccccceEE
Confidence 33334445566665544431 35679999999999887 77766543321 155666
Q ss_pred ecCCCCCCCCCCCCCCChHHHHHHHHH----HHHHhC---------CCceEEEEEchhHHHHHHHHhhC---ccccccEE
Q 024228 78 PDFLFFGSSVTDRPDRTASFQAECMAK----GLRKLG---------VEKCTLVGVSYGGMVGFKMAEMY---PDLVESMV 141 (270)
Q Consensus 78 ~d~~g~G~s~~~~~~~~~~~~~~~~~~----~l~~~~---------~~~~~l~G~S~Gg~~a~~~a~~~---p~~v~~~i 141 (270)
+|+-+ +-. .....+..+.++-+.+ +++... ...++++||||||.+|..++..- ++.|.-++
T Consensus 138 VDFnE--e~t-Am~G~~l~dQtEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntII 214 (973)
T KOG3724|consen 138 VDFNE--EFT-AMHGHILLDQTEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTII 214 (973)
T ss_pred Ecccc--hhh-hhccHhHHHHHHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhh
Confidence 66532 000 0011233333333333 333222 23499999999999998665432 34566666
Q ss_pred EecccCCC
Q 024228 142 VTCSVMGL 149 (270)
Q Consensus 142 ~~~~~~~~ 149 (270)
..+++...
T Consensus 215 TlssPH~a 222 (973)
T KOG3724|consen 215 TLSSPHAA 222 (973)
T ss_pred hhcCcccC
Confidence 66665443
No 182
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=98.29 E-value=8.7e-06 Score=65.08 Aligned_cols=120 Identities=19% Similarity=0.188 Sum_probs=75.9
Q ss_pred cCCeEEEEEecC-CCCCCceEEEeCCCCCcccc--cHHHHHHHhhcc--ceEEeecCCC--CCCCC--------CCCCCC
Q 024228 29 EPGTILNIWVPK-KTTKKHAVVLLHPFGFDGIL--TWQFQVLALAKT--YEVYVPDFLF--FGSSV--------TDRPDR 93 (270)
Q Consensus 29 ~~g~~l~~~~~~-~~~~~~~vv~~hG~~~~~~~--~~~~~~~~l~~~--~~v~~~d~~g--~G~s~--------~~~~~~ 93 (270)
+|...|.+|.+. +.++.|++|+|||++..... ....--..|+++ +-|+++++|- .|.-+ ......
T Consensus 77 EDCL~LNIwaP~~~a~~~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~ 156 (491)
T COG2272 77 EDCLYLNIWAPEVPAEKLPVMVYIHGGGYIMGSGSEPLYDGSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNL 156 (491)
T ss_pred ccceeEEeeccCCCCCCCcEEEEEeccccccCCCcccccChHHHHhcCCEEEEEeCcccccceeeehhhccccccccccc
Confidence 478889999988 55667999999997643331 211223556555 8899999982 12111 111112
Q ss_pred ChHHH---HHHHHHHHHHhCC--CceEEEEEchhHHHHHHHHhh--CccccccEEEecccCC
Q 024228 94 TASFQ---AECMAKGLRKLGV--EKCTLVGVSYGGMVGFKMAEM--YPDLVESMVVTCSVMG 148 (270)
Q Consensus 94 ~~~~~---~~~~~~~l~~~~~--~~~~l~G~S~Gg~~a~~~a~~--~p~~v~~~i~~~~~~~ 148 (270)
.+.+. .+++.+-|++++. ++|.|+|+|.||+.++.+.+- ....+.++|+.++...
T Consensus 157 Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 157 GLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGAAS 218 (491)
T ss_pred cHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCCCC
Confidence 33333 3455556666754 579999999999888766553 1235777788777664
No 183
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=98.25 E-value=5.1e-05 Score=60.94 Aligned_cols=104 Identities=16% Similarity=0.019 Sum_probs=68.9
Q ss_pred CCCceEEEeCCCCCcccccHHHHHHH-------------------hhccceEEeec-CCCCCCCCC--CCCCCChHHHHH
Q 024228 43 TKKHAVVLLHPFGFDGILTWQFQVLA-------------------LAKTYEVYVPD-FLFFGSSVT--DRPDRTASFQAE 100 (270)
Q Consensus 43 ~~~~~vv~~hG~~~~~~~~~~~~~~~-------------------l~~~~~v~~~d-~~g~G~s~~--~~~~~~~~~~~~ 100 (270)
.++|.++++.|++|++. .+..+.+. +...-.++.+| .-|.|.|.. .....+.....+
T Consensus 99 ~~rPvi~wlNGGPGcSS-~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPvGTGfS~a~~~e~~~d~~~~~~ 177 (498)
T COG2939 99 ANRPVIFWLNGGPGCSS-VTGLLGELGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPVGTGFSRALGDEKKKDFEGAGK 177 (498)
T ss_pred CCCceEEEecCCCChHh-hhhhhhhcCCeeeeCCCCCCCCCCccccccCCceEEEecCcccCcccccccccccchhccch
Confidence 35799999999999988 77655321 11124689999 558999884 223344555555
Q ss_pred HHHHHHHHh-------C--CCceEEEEEchhHHHHHHHHhhCcc---ccccEEEecccC
Q 024228 101 CMAKGLRKL-------G--VEKCTLVGVSYGGMVGFKMAEMYPD---LVESMVVTCSVM 147 (270)
Q Consensus 101 ~~~~~l~~~-------~--~~~~~l~G~S~Gg~~a~~~a~~~p~---~v~~~i~~~~~~ 147 (270)
|+..+.+.+ . ..+.+|+|.|+||..+..+|..--+ ..++++.+.+..
T Consensus 178 D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvl 236 (498)
T COG2939 178 DVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVL 236 (498)
T ss_pred hHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeee
Confidence 555554432 2 2489999999999988888775433 356666665543
No 184
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=98.22 E-value=0.00021 Score=53.34 Aligned_cols=105 Identities=13% Similarity=0.110 Sum_probs=76.0
Q ss_pred CCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEEchhH
Q 024228 44 KKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVSYGG 123 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg 123 (270)
..|.|+++-.+.++.....+...+.|-....|+.-|+-.--.-+-..+.++++++.+-+.+.+..++.+ .++++.|.=+
T Consensus 102 pdPkvLivapmsGH~aTLLR~TV~alLp~~~vyitDW~dAr~Vp~~~G~FdldDYIdyvie~~~~~Gp~-~hv~aVCQP~ 180 (415)
T COG4553 102 PDPKVLIVAPMSGHYATLLRGTVEALLPYHDVYITDWVDARMVPLEAGHFDLDDYIDYVIEMINFLGPD-AHVMAVCQPT 180 (415)
T ss_pred CCCeEEEEecccccHHHHHHHHHHHhccccceeEeeccccceeecccCCccHHHHHHHHHHHHHHhCCC-CcEEEEecCC
Confidence 456788887777765534455667777778888888864444444446689999999999999999865 7788887654
Q ss_pred -----HHHHHHHhhCccccccEEEecccCCC
Q 024228 124 -----MVGFKMAEMYPDLVESMVVTCSVMGL 149 (270)
Q Consensus 124 -----~~a~~~a~~~p~~v~~~i~~~~~~~~ 149 (270)
.+++..+...|..-..+++++++.+.
T Consensus 181 vPvLAAisLM~~~~~p~~PssMtlmGgPIDa 211 (415)
T COG4553 181 VPVLAAISLMEEDGDPNVPSSMTLMGGPIDA 211 (415)
T ss_pred chHHHHHHHHHhcCCCCCCceeeeecCcccc
Confidence 44555555567778899999887654
No 185
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=98.19 E-value=1.4e-05 Score=67.47 Aligned_cols=119 Identities=18% Similarity=0.084 Sum_probs=66.1
Q ss_pred ecCCeEEEEEecCCCCC---CceEEEeCCCCCcccc----cHHHHHHHhhcc-ceEEeecCC----CCCCCCCC--C-CC
Q 024228 28 IEPGTILNIWVPKKTTK---KHAVVLLHPFGFDGIL----TWQFQVLALAKT-YEVYVPDFL----FFGSSVTD--R-PD 92 (270)
Q Consensus 28 ~~~g~~l~~~~~~~~~~---~~~vv~~hG~~~~~~~----~~~~~~~~l~~~-~~v~~~d~~----g~G~s~~~--~-~~ 92 (270)
.+|...|.++.+..... .|++|++||++..... .+.. ...+.++ .-||+++|| |+-.+... . ..
T Consensus 105 sEDCL~LnI~~P~~~~~~~~lPV~v~ihGG~f~~G~~~~~~~~~-~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN 183 (535)
T PF00135_consen 105 SEDCLYLNIYTPSNASSNSKLPVMVWIHGGGFMFGSGSFPPYDG-ASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGN 183 (535)
T ss_dssp ES---EEEEEEETSSSSTTSEEEEEEE--STTTSSCTTSGGGHT-HHHHHHHTSEEEEE----HHHHH-BSSSTTSHBST
T ss_pred CchHHHHhhhhccccccccccceEEEeecccccCCCcccccccc-cccccCCCEEEEEecccccccccccccccccCchh
Confidence 44778899998876543 5999999997744331 2222 2334444 999999998 33222211 1 33
Q ss_pred CChHHHH---HHHHHHHHHhCC--CceEEEEEchhHHHHHHHHhhC--ccccccEEEecccC
Q 024228 93 RTASFQA---ECMAKGLRKLGV--EKCTLVGVSYGGMVGFKMAEMY--PDLVESMVVTCSVM 147 (270)
Q Consensus 93 ~~~~~~~---~~~~~~l~~~~~--~~~~l~G~S~Gg~~a~~~a~~~--p~~v~~~i~~~~~~ 147 (270)
..+.+.. +++.+-|..+|. ++|.|+|+|.||..+...+..- ...++++|+.++..
T Consensus 184 ~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~ 245 (535)
T PF00135_consen 184 YGLLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSA 245 (535)
T ss_dssp HHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--T
T ss_pred hhhhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeecccccccccccccccccc
Confidence 3333333 344444555553 4799999999998776655542 34799999998854
No 186
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=98.13 E-value=0.00031 Score=55.02 Aligned_cols=59 Identities=15% Similarity=0.216 Sum_probs=47.2
Q ss_pred eeeeEEEcCCCccCCHHHHHHHHHHhc-----------------------CC-ceEEEecCCCcceeecchHhHHHHHHH
Q 024228 202 EKIHLLWGENDKIFDMQVARNLKEQVG-----------------------QN-ATMESIEKAGHLVNLERPFVYNRQLKT 257 (270)
Q Consensus 202 ~P~l~i~g~~D~~~~~~~~~~~~~~~~-----------------------~~-~~~~~~~~~gH~~~~~~~~~~~~~i~~ 257 (270)
+++|+..|+.|.+++.--.+.+.+.+. .+ .++..+.+|||+.. .+|+...+.+.+
T Consensus 234 i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al~m~~~ 312 (319)
T PLN02213 234 YRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQR 312 (319)
T ss_pred ceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHHHHHHH
Confidence 799999999999998766666655442 12 56677789999996 699999999999
Q ss_pred HHHh
Q 024228 258 ILAS 261 (270)
Q Consensus 258 fl~~ 261 (270)
|+..
T Consensus 313 fi~~ 316 (319)
T PLN02213 313 WISG 316 (319)
T ss_pred HHcC
Confidence 9964
No 187
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=98.11 E-value=5.9e-05 Score=55.42 Aligned_cols=99 Identities=17% Similarity=0.204 Sum_probs=65.9
Q ss_pred ceEEEeCCCCCccc-ccHHHHHHHhhcc--ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhC--CCceEEEEEc
Q 024228 46 HAVVLLHPFGFDGI-LTWQFQVLALAKT--YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLG--VEKCTLVGVS 120 (270)
Q Consensus 46 ~~vv~~hG~~~~~~-~~~~~~~~~l~~~--~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~l~G~S 120 (270)
.++|++||++.... .....+.+.+.+. ..++++|. |-| .....-....+.++.+.+.+.... .+-+.++|.|
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei-g~g--~~~s~l~pl~~Qv~~~ce~v~~m~~lsqGynivg~S 100 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI-GDG--IKDSSLMPLWEQVDVACEKVKQMPELSQGYNIVGYS 100 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe-cCC--cchhhhccHHHHHHHHHHHHhcchhccCceEEEEEc
Confidence 68999999998877 2366777777776 88888886 344 111111233344444444433221 2458999999
Q ss_pred hhHHHHHHHHhhCcc-ccccEEEecccC
Q 024228 121 YGGMVGFKMAEMYPD-LVESMVVTCSVM 147 (270)
Q Consensus 121 ~Gg~~a~~~a~~~p~-~v~~~i~~~~~~ 147 (270)
.||.++-.++..-++ .|+.+|.++++-
T Consensus 101 QGglv~Raliq~cd~ppV~n~ISL~gPh 128 (296)
T KOG2541|consen 101 QGGLVARALIQFCDNPPVKNFISLGGPH 128 (296)
T ss_pred cccHHHHHHHHhCCCCCcceeEeccCCc
Confidence 999999988887654 488899887653
No 188
>COG0627 Predicted esterase [General function prediction only]
Probab=98.05 E-value=0.00025 Score=54.87 Aligned_cols=53 Identities=17% Similarity=0.217 Sum_probs=41.3
Q ss_pred HHHHHHHHHHH-hCC----CceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCC
Q 024228 98 QAECMAKGLRK-LGV----EKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLT 150 (270)
Q Consensus 98 ~~~~~~~~l~~-~~~----~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~ 150 (270)
+.+++-+.+++ ... ++..++||||||.-|+.+|.++|++++.+..+++.....
T Consensus 133 l~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s 190 (316)
T COG0627 133 LTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPS 190 (316)
T ss_pred HHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceecccccccccc
Confidence 34556644443 321 278999999999999999999999999999988887655
No 189
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=98.04 E-value=0.00019 Score=54.07 Aligned_cols=107 Identities=12% Similarity=0.027 Sum_probs=61.4
Q ss_pred CCCceEEEeCCCCCccc-ccHHHHHHHhhcc----ceEEeecCCCCCCCCC--CCCCCChHHHHHHHHHHHHHh-----C
Q 024228 43 TKKHAVVLLHPFGFDGI-LTWQFQVLALAKT----YEVYVPDFLFFGSSVT--DRPDRTASFQAECMAKGLRKL-----G 110 (270)
Q Consensus 43 ~~~~~vv~~hG~~~~~~-~~~~~~~~~l~~~----~~v~~~d~~g~G~s~~--~~~~~~~~~~~~~~~~~l~~~-----~ 110 (270)
.+.|.+++.||-..... ..++.+-..+.+. ..++.+|.-.--.... .........+++++.-.++.. .
T Consensus 96 ~k~pvl~~~DG~~~~~~g~i~~~~dsli~~g~i~pai~vgid~~d~~~R~~~~~~n~~~~~~L~~eLlP~v~~~yp~~~~ 175 (299)
T COG2382 96 EKYPVLYLQDGQDWFRSGRIPRILDSLIAAGEIPPAILVGIDYIDVKKRREELHCNEAYWRFLAQELLPYVEERYPTSAD 175 (299)
T ss_pred ccccEEEEeccHHHHhcCChHHHHHHHHHcCCCCCceEEecCCCCHHHHHHHhcccHHHHHHHHHHhhhhhhccCccccc
Confidence 35688999998432111 1333333444443 5566666531000000 000112223344444444432 1
Q ss_pred CCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCC
Q 024228 111 VEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGL 149 (270)
Q Consensus 111 ~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~ 149 (270)
...-+|.|.|+||.+++..+..+|+++..++..+|....
T Consensus 176 a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~~ 214 (299)
T COG2382 176 ADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFWW 214 (299)
T ss_pred CCCcEEeccccccHHHHHHHhcCchhhceeeccCCcccc
Confidence 235789999999999999999999999999988877654
No 190
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=97.94 E-value=0.0015 Score=53.92 Aligned_cols=84 Identities=17% Similarity=0.183 Sum_probs=57.7
Q ss_pred HHHHhhccceEEeecCCCCCCCCC---CCCCCChHHHH-----------HHHHHHHHHh---CCCceEEEEEchhHHHHH
Q 024228 65 QVLALAKTYEVYVPDFLFFGSSVT---DRPDRTASFQA-----------ECMAKGLRKL---GVEKCTLVGVSYGGMVGF 127 (270)
Q Consensus 65 ~~~~l~~~~~v~~~d~~g~G~s~~---~~~~~~~~~~~-----------~~~~~~l~~~---~~~~~~l~G~S~Gg~~a~ 127 (270)
+...+++.|.++.=|- ||..+.. .....+.+.+. .--.++++.+ ..+.-+..|.|-||.-++
T Consensus 52 ~~~~~~~G~A~~~TD~-Gh~~~~~~~~~~~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl 130 (474)
T PF07519_consen 52 MATALARGYATASTDS-GHQGSAGSDDASFGNNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGL 130 (474)
T ss_pred cchhhhcCeEEEEecC-CCCCCcccccccccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHH
Confidence 4567777799999996 6655532 11113333222 2223344433 345688999999999999
Q ss_pred HHHhhCccccccEEEecccCCC
Q 024228 128 KMAEMYPDLVESMVVTCSVMGL 149 (270)
Q Consensus 128 ~~a~~~p~~v~~~i~~~~~~~~ 149 (270)
..|+++|+..++++.-+|....
T Consensus 131 ~~AQryP~dfDGIlAgaPA~~~ 152 (474)
T PF07519_consen 131 MAAQRYPEDFDGILAGAPAINW 152 (474)
T ss_pred HHHHhChhhcCeEEeCCchHHH
Confidence 9999999999999999987654
No 191
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=97.93 E-value=3.3e-05 Score=44.10 Aligned_cols=42 Identities=24% Similarity=0.302 Sum_probs=25.9
Q ss_pred CceeEEEeecCCeEEEEEec-CCC------CCCceEEEeCCCCCcccccH
Q 024228 20 GMTQRTIEIEPGTILNIWVP-KKT------TKKHAVVLLHPFGFDGILTW 62 (270)
Q Consensus 20 ~~~~~~i~~~~g~~l~~~~~-~~~------~~~~~vv~~hG~~~~~~~~~ 62 (270)
..+++.|.++||..|..+.. .+. .++|+|++.||+.+++. .|
T Consensus 11 ~~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~-~w 59 (63)
T PF04083_consen 11 PCEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSD-DW 59 (63)
T ss_dssp --EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GG-GG
T ss_pred CcEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChH-HH
Confidence 46899999999999976543 222 36789999999999988 77
No 192
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=97.92 E-value=0.00012 Score=57.33 Aligned_cols=101 Identities=20% Similarity=0.187 Sum_probs=76.8
Q ss_pred CCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCC---CChHHHHHHHHHHHHHhC---CCceEEE
Q 024228 44 KKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPD---RTASFQAECMAKGLRKLG---VEKCTLV 117 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~---~~~~~~~~~~~~~l~~~~---~~~~~l~ 117 (270)
..|+|+..-|++.............|. -+-+.+++|-+|.|.+.+.+ .++.+-+.|..++++.++ .++-+--
T Consensus 62 drPtV~~T~GY~~~~~p~r~Ept~Lld--~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~iY~~kWIST 139 (448)
T PF05576_consen 62 DRPTVLYTEGYNVSTSPRRSEPTQLLD--GNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPIYPGKWIST 139 (448)
T ss_pred CCCeEEEecCcccccCccccchhHhhc--cceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhhccCCceec
Confidence 578888888988765422223333443 57888999999999877654 678888889888877764 3577888
Q ss_pred EEchhHHHHHHHHhhCccccccEEEeccc
Q 024228 118 GVSYGGMVGFKMAEMYPDLVESMVVTCSV 146 (270)
Q Consensus 118 G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~ 146 (270)
|.|=||+.++.+=.-+|+.|++.|..-++
T Consensus 140 G~SKGGmTa~y~rrFyP~DVD~tVaYVAP 168 (448)
T PF05576_consen 140 GGSKGGMTAVYYRRFYPDDVDGTVAYVAP 168 (448)
T ss_pred CcCCCceeEEEEeeeCCCCCCeeeeeecc
Confidence 99999999998878889999998865444
No 193
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=97.86 E-value=5.3e-05 Score=58.96 Aligned_cols=85 Identities=24% Similarity=0.097 Sum_probs=59.9
Q ss_pred CceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHh----CCCceEEEEE
Q 024228 45 KHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKL----GVEKCTLVGV 119 (270)
Q Consensus 45 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~l~G~ 119 (270)
...-||+.|=|+-.+ .=..+...|.+. +.|+-+|-.-+-.| ..+.++.++|+..+++.. +..++.|+|+
T Consensus 260 d~~av~~SGDGGWr~-lDk~v~~~l~~~gvpVvGvdsLRYfW~-----~rtPe~~a~Dl~r~i~~y~~~w~~~~~~liGy 333 (456)
T COG3946 260 DTVAVFYSGDGGWRD-LDKEVAEALQKQGVPVVGVDSLRYFWS-----ERTPEQIAADLSRLIRFYARRWGAKRVLLIGY 333 (456)
T ss_pred ceEEEEEecCCchhh-hhHHHHHHHHHCCCceeeeehhhhhhc-----cCCHHHHHHHHHHHHHHHHHhhCcceEEEEee
Confidence 344556666444333 334567888888 99999995433333 357888899999888765 5679999999
Q ss_pred chhHHHHHHHHhhCcc
Q 024228 120 SYGGMVGFKMAEMYPD 135 (270)
Q Consensus 120 S~Gg~~a~~~a~~~p~ 135 (270)
|+|+-+.-..-.+.|.
T Consensus 334 SfGADvlP~~~n~L~~ 349 (456)
T COG3946 334 SFGADVLPFAYNRLPP 349 (456)
T ss_pred cccchhhHHHHHhCCH
Confidence 9999877665555553
No 194
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=97.85 E-value=0.0011 Score=49.30 Aligned_cols=53 Identities=17% Similarity=0.242 Sum_probs=41.7
Q ss_pred HHHHHHHHHH---hCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCc
Q 024228 99 AECMAKGLRK---LGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTE 151 (270)
Q Consensus 99 ~~~~~~~l~~---~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~ 151 (270)
.+.+.-++++ ++.++..++|||+||.+++.....+|+.+...++++|...+..
T Consensus 121 ~~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSlWw~n 176 (264)
T COG2819 121 TEQLKPFIEARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSLWWHN 176 (264)
T ss_pred HHhhHHHHhcccccCcccceeeeecchhHHHHHHHhcCcchhceeeeecchhhhCC
Confidence 3444445554 2456789999999999999999999999999999998766443
No 195
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=97.82 E-value=3.1e-05 Score=58.07 Aligned_cols=103 Identities=15% Similarity=0.049 Sum_probs=52.2
Q ss_pred CCceEEEeCCCCCccc--ccHHHHHHHhhcc---ceEEeecCCCCCCCC-CCCC-CCChHHHHHHHHHHHHHhC--CCce
Q 024228 44 KKHAVVLLHPFGFDGI--LTWQFQVLALAKT---YEVYVPDFLFFGSSV-TDRP-DRTASFQAECMAKGLRKLG--VEKC 114 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~--~~~~~~~~~l~~~---~~v~~~d~~g~G~s~-~~~~-~~~~~~~~~~~~~~l~~~~--~~~~ 114 (270)
+..|||+.||++.+.. ..+..+...+.+. .-|.+++.- -+.+. .... -.+....++.+.+.++... .+-+
T Consensus 4 ~~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~ig-~~~~~D~~~s~f~~v~~Qv~~vc~~l~~~p~L~~G~ 82 (279)
T PF02089_consen 4 SPLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEIG-NDPSEDVENSFFGNVNDQVEQVCEQLANDPELANGF 82 (279)
T ss_dssp SS--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--SS-SSHHHHHHHHHHSHHHHHHHHHHHHHHH-GGGTT-E
T ss_pred CCCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEEC-CCcchhhhhhHHHHHHHHHHHHHHHHhhChhhhcce
Confidence 4578999999997642 1445544444433 556666652 21110 0000 0233444444555554422 1469
Q ss_pred EEEEEchhHHHHHHHHhhCcc-ccccEEEecccC
Q 024228 115 TLVGVSYGGMVGFKMAEMYPD-LVESMVVTCSVM 147 (270)
Q Consensus 115 ~l~G~S~Gg~~a~~~a~~~p~-~v~~~i~~~~~~ 147 (270)
.++|+|.||.++-.++.+.++ .|+.+|.++++-
T Consensus 83 ~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph 116 (279)
T PF02089_consen 83 NAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPH 116 (279)
T ss_dssp EEEEETCHHHHHHHHHHH-TSS-EEEEEEES--T
T ss_pred eeeeeccccHHHHHHHHHCCCCCceeEEEecCcc
Confidence 999999999999999999864 699999998763
No 196
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=97.76 E-value=0.00016 Score=58.14 Aligned_cols=81 Identities=15% Similarity=0.151 Sum_probs=55.7
Q ss_pred cHHHHHHHhhcc-c------eEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHh---CCCceEEEEEchhHHHHHHHH
Q 024228 61 TWQFQVLALAKT-Y------EVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKL---GVEKCTLVGVSYGGMVGFKMA 130 (270)
Q Consensus 61 ~~~~~~~~l~~~-~------~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~l~G~S~Gg~~a~~~a 130 (270)
.|..+++.|.+. | ...-+|+|-. . . ..+.+...+...|+.. ..++++|+||||||.++..+.
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR~~---~----~-~~~~~~~~lk~~ie~~~~~~~~kv~li~HSmGgl~~~~fl 137 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWRLS---P----A-ERDEYFTKLKQLIEEAYKKNGKKVVLIAHSMGGLVARYFL 137 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechhhc---h----h-hHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCchHHHHHH
Confidence 688888888763 2 2333687721 1 1 2334455555555543 357999999999999999988
Q ss_pred hhCcc------ccccEEEecccCCC
Q 024228 131 EMYPD------LVESMVVTCSVMGL 149 (270)
Q Consensus 131 ~~~p~------~v~~~i~~~~~~~~ 149 (270)
...+. .|+++|.++++...
T Consensus 138 ~~~~~~~W~~~~i~~~i~i~~p~~G 162 (389)
T PF02450_consen 138 QWMPQEEWKDKYIKRFISIGTPFGG 162 (389)
T ss_pred HhccchhhHHhhhhEEEEeCCCCCC
Confidence 87743 59999999987653
No 197
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.76 E-value=0.00016 Score=56.62 Aligned_cols=101 Identities=18% Similarity=0.125 Sum_probs=73.2
Q ss_pred CceEEEeCCCCCcccccHH---HHHHHhhcc--ceEEeecCCCCCCCCCCC----------CCCChHHHHHHHHHHHHHh
Q 024228 45 KHAVVLLHPFGFDGILTWQ---FQVLALAKT--YEVYVPDFLFFGSSVTDR----------PDRTASFQAECMAKGLRKL 109 (270)
Q Consensus 45 ~~~vv~~hG~~~~~~~~~~---~~~~~l~~~--~~v~~~d~~g~G~s~~~~----------~~~~~~~~~~~~~~~l~~~ 109 (270)
+.+|+|.-|.-++-+ .+. .++..++.+ .-++..++|-+|+|.+-. ...+.++...|...++..+
T Consensus 80 ~gPIffYtGNEGdie-~Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~l 158 (492)
T KOG2183|consen 80 EGPIFFYTGNEGDIE-WFANNTGFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFL 158 (492)
T ss_pred CCceEEEeCCcccHH-HHHhccchHHhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHH
Confidence 367889889877665 332 234444444 678899999999987432 1245666677888888777
Q ss_pred CC------CceEEEEEchhHHHHHHHHhhCccccccEEEeccc
Q 024228 110 GV------EKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSV 146 (270)
Q Consensus 110 ~~------~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~ 146 (270)
+. .+++.+|-|+||+++..+=.++|..+.|.+..+++
T Consensus 159 K~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAP 201 (492)
T KOG2183|consen 159 KRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAP 201 (492)
T ss_pred hhccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCc
Confidence 42 37999999999999999999999977776654443
No 198
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.74 E-value=0.0012 Score=47.01 Aligned_cols=129 Identities=23% Similarity=0.285 Sum_probs=73.0
Q ss_pred cCCceeEEEeecCCe---EEEE-EecCC--CCCCceEEEeCCCCCcccccHHH---------------HH-HHhhccceE
Q 024228 18 LVGMTQRTIEIEPGT---ILNI-WVPKK--TTKKHAVVLLHPFGFDGILTWQF---------------QV-LALAKTYEV 75 (270)
Q Consensus 18 ~~~~~~~~i~~~~g~---~l~~-~~~~~--~~~~~~vv~~hG~~~~~~~~~~~---------------~~-~~l~~~~~v 75 (270)
..++.+..|.++ +. ...+ +.... ..+...+|++||.|.-....|.+ ++ +..+..|.|
T Consensus 69 ~c~Lkr~~ip~d-~~e~E~~SFiF~s~~~lt~~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygv 147 (297)
T KOG3967|consen 69 DCNLKRVSIPVD-ATESEPKSFIFMSEDALTNPQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGV 147 (297)
T ss_pred cCCceeEeecCC-CCCCCCcceEEEChhHhcCccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcE
Confidence 345677777773 42 2222 22222 24567899999988544435533 12 334445888
Q ss_pred EeecCCC---CCCCCCCCC--CCChHHHHHH-HHHHHHHhCCCceEEEEEchhHHHHHHHHhhCcc--ccccEEEecccC
Q 024228 76 YVPDFLF---FGSSVTDRP--DRTASFQAEC-MAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPD--LVESMVVTCSVM 147 (270)
Q Consensus 76 ~~~d~~g---~G~s~~~~~--~~~~~~~~~~-~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~--~v~~~i~~~~~~ 147 (270)
+..+.-- +-.+...+. ..+..+.+.- -..++.-...+.+.++.||.||...+.+..++|+ +|.++.+.+++.
T Consensus 148 iv~N~N~~~kfye~k~np~kyirt~veh~~yvw~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~~ 227 (297)
T KOG3967|consen 148 IVLNPNRERKFYEKKRNPQKYIRTPVEHAKYVWKNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSAM 227 (297)
T ss_pred EEeCCchhhhhhhcccCcchhccchHHHHHHHHHHHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeecccc
Confidence 8876431 111111111 1222222221 1233333456789999999999999999999985 577777766553
No 199
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.63 E-value=0.00018 Score=49.89 Aligned_cols=50 Identities=14% Similarity=-0.037 Sum_probs=35.1
Q ss_pred HHHHHHHHHHh----CCCceEEEEEchhHHHHHHHHhhCcc----ccccEEEecccCC
Q 024228 99 AECMAKGLRKL----GVEKCTLVGVSYGGMVGFKMAEMYPD----LVESMVVTCSVMG 148 (270)
Q Consensus 99 ~~~~~~~l~~~----~~~~~~l~G~S~Gg~~a~~~a~~~p~----~v~~~i~~~~~~~ 148 (270)
...+...++.. ...+++++|||+||.+|..++..... ++..++.++++..
T Consensus 11 ~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~ 68 (153)
T cd00741 11 ANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRV 68 (153)
T ss_pred HHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCcc
Confidence 34444444443 56789999999999999998887654 4566777766544
No 200
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.56 E-value=0.0012 Score=45.34 Aligned_cols=45 Identities=13% Similarity=0.130 Sum_probs=37.1
Q ss_pred HHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCC
Q 024228 105 GLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGL 149 (270)
Q Consensus 105 ~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~ 149 (270)
++++.-..+.++-|.||||+.|+.+.-++|+...++|.+++....
T Consensus 94 v~eEalpgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYda 138 (227)
T COG4947 94 VIEEALPGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYDA 138 (227)
T ss_pred HHHhhcCCCccccccchhhhhhhhhheeChhHhhhheeecceeeH
Confidence 344433456788899999999999999999999999999987654
No 201
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=97.54 E-value=0.032 Score=45.32 Aligned_cols=112 Identities=13% Similarity=0.108 Sum_probs=70.5
Q ss_pred CeEEE-EEecCCCCCCceEEEeCCCCCcccccHHH--HHHHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHH
Q 024228 31 GTILN-IWVPKKTTKKHAVVLLHPFGFDGILTWQF--QVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLR 107 (270)
Q Consensus 31 g~~l~-~~~~~~~~~~~~vv~~hG~~~~~~~~~~~--~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~ 107 (270)
+..+. |+.||. -+.|..|.+.|+-. .+ .|+. +++.|.. --.+.=|.|--|.+-......-.....+-|.+.++
T Consensus 275 reEi~yYFnPGD-~KPPL~VYFSGyR~-aE-GFEgy~MMk~Lg~-PfLL~~DpRleGGaFYlGs~eyE~~I~~~I~~~L~ 350 (511)
T TIGR03712 275 RQEFIYYFNPGD-FKPPLNVYFSGYRP-AE-GFEGYFMMKRLGA-PFLLIGDPRLEGGAFYLGSDEYEQGIINVIQEKLD 350 (511)
T ss_pred CCeeEEecCCcC-CCCCeEEeeccCcc-cC-cchhHHHHHhcCC-CeEEeeccccccceeeeCcHHHHHHHHHHHHHHHH
Confidence 44444 444554 45677888998876 34 4443 3455543 33444577766655433333234455666777788
Q ss_pred HhCCC--ceEEEEEchhHHHHHHHHhhCccccccEEEecccCC
Q 024228 108 KLGVE--KCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMG 148 (270)
Q Consensus 108 ~~~~~--~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~ 148 (270)
.|+.+ .++|-|-|||..-|+.++++.. ..++|+--|...
T Consensus 351 ~LgF~~~qLILSGlSMGTfgAlYYga~l~--P~AIiVgKPL~N 391 (511)
T TIGR03712 351 YLGFDHDQLILSGLSMGTFGALYYGAKLS--PHAIIVGKPLVN 391 (511)
T ss_pred HhCCCHHHeeeccccccchhhhhhcccCC--CceEEEcCcccc
Confidence 88765 6999999999999999999863 456666555443
No 202
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.46 E-value=0.00041 Score=47.28 Aligned_cols=37 Identities=16% Similarity=0.111 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhC
Q 024228 97 FQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMY 133 (270)
Q Consensus 97 ~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 133 (270)
...+.+..+++.....++++.|||+||.+|..++...
T Consensus 49 ~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~l 85 (140)
T PF01764_consen 49 QILDALKELVEKYPDYSIVITGHSLGGALASLAAADL 85 (140)
T ss_dssp HHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccCccchhhccchHHHHHHHHHHhh
Confidence 3345555655555656899999999999999888763
No 203
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.41 E-value=0.0015 Score=52.68 Aligned_cols=105 Identities=19% Similarity=0.213 Sum_probs=78.0
Q ss_pred CCCceEEEeCCCCCcccccHHH----HHHHhhcc--ceEEeecCCCCCCCCCCCCC-------CChHHHHHHHHHHHHHh
Q 024228 43 TKKHAVVLLHPFGFDGILTWQF----QVLALAKT--YEVYVPDFLFFGSSVTDRPD-------RTASFQAECMAKGLRKL 109 (270)
Q Consensus 43 ~~~~~vv~~hG~~~~~~~~~~~----~~~~l~~~--~~v~~~d~~g~G~s~~~~~~-------~~~~~~~~~~~~~l~~~ 109 (270)
+++|..|+|-|=+.... .|.. ....++++ ..|+.+++|-+|.|.+.... .+.++...|+.++|+++
T Consensus 84 ~~gPiFLmIGGEgp~~~-~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~ 162 (514)
T KOG2182|consen 84 PGGPIFLMIGGEGPESD-KWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAM 162 (514)
T ss_pred CCCceEEEEcCCCCCCC-CccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHH
Confidence 56788888888665554 4422 12334444 78999999999988643311 46677788999999887
Q ss_pred CC-------CceEEEEEchhHHHHHHHHhhCccccccEEEecccCC
Q 024228 110 GV-------EKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMG 148 (270)
Q Consensus 110 ~~-------~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~ 148 (270)
.. .+.+.+|-|+-|.++..+=.++|+.+-+.|..+++..
T Consensus 163 n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv~ 208 (514)
T KOG2182|consen 163 NAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPVL 208 (514)
T ss_pred HhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeeccccccee
Confidence 32 2789999999999999999999999988888776653
No 204
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=97.35 E-value=0.019 Score=42.49 Aligned_cols=90 Identities=16% Similarity=0.173 Sum_probs=54.5
Q ss_pred eEEEeCCCC--CcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHH----HHHHHHh----CC----
Q 024228 47 AVVLLHPFG--FDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECM----AKGLRKL----GV---- 111 (270)
Q Consensus 47 ~vv~~hG~~--~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~----~~~l~~~----~~---- 111 (270)
.|=|+-|.. ....-.|+.+.+.|+++ |.|++.-+.- | ++-...+..+ ...++.+ +.
T Consensus 19 vihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~-t--------fDH~~~A~~~~~~f~~~~~~L~~~~~~~~~~ 89 (250)
T PF07082_consen 19 VIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVV-T--------FDHQAIAREVWERFERCLRALQKRGGLDPAY 89 (250)
T ss_pred EEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCC-C--------CcHHHHHHHHHHHHHHHHHHHHHhcCCCccc
Confidence 344555532 23335888999999988 9999976641 1 1222222222 2222222 11
Q ss_pred CceEEEEEchhHHHHHHHHhhCccccccEEEecc
Q 024228 112 EKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCS 145 (270)
Q Consensus 112 ~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~ 145 (270)
-+++-+|||+|+-+-+.+...++..-++-++++-
T Consensus 90 lP~~~vGHSlGcklhlLi~s~~~~~r~gniliSF 123 (250)
T PF07082_consen 90 LPVYGVGHSLGCKLHLLIGSLFDVERAGNILISF 123 (250)
T ss_pred CCeeeeecccchHHHHHHhhhccCcccceEEEec
Confidence 2677899999999988888877655567777763
No 205
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=97.34 E-value=0.00069 Score=52.34 Aligned_cols=149 Identities=14% Similarity=0.060 Sum_probs=88.1
Q ss_pred HHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCchhhhHhhhhcc-----------chhhhhhccccc
Q 024228 106 LRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIG-----------YESWVDFLLPKT 174 (270)
Q Consensus 106 l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~ 174 (270)
+..+.++.+.+-|-|--|+.++..|...| +|.++|-...-.--.........+..+ .....+.+....
T Consensus 228 L~q~~Ik~F~VTGaSKRgWttwLTAIaDp-rv~aIvp~v~D~Lni~a~L~hiyrsYGgnwpi~l~pyyaegi~erl~tp~ 306 (507)
T COG4287 228 LEQVEIKGFMVTGASKRGWTTWLTAIADP-RVFAIVPFVYDNLNIEAQLLHIYRSYGGNWPIKLAPYYAEGIDERLETPL 306 (507)
T ss_pred hhheeeeeEEEeccccchHHHHHHHhcCc-chhhhhhhHHhhcccHHHHHHHHHhhCCCCCcccchhHhhhHHHhhcCHH
Confidence 34456778999999999999999888877 477776433211111111111111111 011111112222
Q ss_pred HHHHHHHHHhhhhcCCCChhhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHHH
Q 024228 175 ADALKVQFDIACYKLPTLPAFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQ 254 (270)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~ 254 (270)
...+.+......+... ....++..|-.++.+..|.+.++..+.-+...+|+...+..+|+..|.... ..+.+.
T Consensus 307 fkqL~~IiDPlay~~t----ry~~RLalpKyivnaSgDdff~pDsa~lYyd~LPG~kaLrmvPN~~H~~~n---~~i~es 379 (507)
T COG4287 307 FKQLLEIIDPLAYRNT----RYQLRLALPKYIVNASGDDFFVPDSANLYYDDLPGEKALRMVPNDPHNLIN---QFIKES 379 (507)
T ss_pred HHHHHHhhcHHHHhhh----hhhhhccccceeecccCCcccCCCccceeeccCCCceeeeeCCCCcchhhH---HHHHHH
Confidence 2333333333333221 112334489999999999999999999999999977889999999998743 334445
Q ss_pred HHHHHHhh
Q 024228 255 LKTILASL 262 (270)
Q Consensus 255 i~~fl~~~ 262 (270)
+..|+.+.
T Consensus 380 l~~flnrf 387 (507)
T COG4287 380 LEPFLNRF 387 (507)
T ss_pred HHHHHHHH
Confidence 55555443
No 206
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.26 E-value=0.051 Score=42.69 Aligned_cols=222 Identities=10% Similarity=0.028 Sum_probs=114.8
Q ss_pred CCceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCC-CCCChHHHHHHHHHHHHHhC--CCceEEEEE
Q 024228 44 KKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDR-PDRTASFQAECMAKGLRKLG--VEKCTLVGV 119 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~-~~~~~~~~~~~~~~~l~~~~--~~~~~l~G~ 119 (270)
+..+||++=||.+..+...........+. +.++.+-.|-+-..-... ...+......-+.+++.... ..++++--+
T Consensus 37 s~k~Iv~~~gWag~~~r~l~ky~~~Yq~~g~~~~~~tap~~~~~~~~s~~~~sl~~~~~~l~~L~~~~~~~~~pi~fh~F 116 (350)
T KOG2521|consen 37 SEKPIVVLLGWAGAIDRNLMKYSKIYQDKGYIVVRITAPCPSVFLSASRRILSLSLASTRLSELLSDYNSDPCPIIFHVF 116 (350)
T ss_pred ccccEEEEeeeccccchhHHHHHHHHhcCCceEEEecCcccccccccccccchhhHHHHHHHHHhhhccCCcCceEEEEe
Confidence 34466666677776662223334444444 888888777543332222 22344444456666666655 457888899
Q ss_pred chhHHHHHHHH---hh-C-c---cccccEEEecccCCCCchhh----------hHhhhhcc-chhhh-hhccccc---HH
Q 024228 120 SYGGMVGFKMA---EM-Y-P---DLVESMVVTCSVMGLTESVS----------NAALERIG-YESWV-DFLLPKT---AD 176 (270)
Q Consensus 120 S~Gg~~a~~~a---~~-~-p---~~v~~~i~~~~~~~~~~~~~----------~~~~~~~~-~~~~~-~~~~~~~---~~ 176 (270)
|+||...+... .. . | +...++++.+.+........ ......+. ..... ....... ..
T Consensus 117 S~ng~~~~~si~~~~~~~~~~~~~~~~~~~fdS~p~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 196 (350)
T KOG2521|consen 117 SGNGVRLMYSISLQLIKHEPKAAQLSGGIIFDSAPARSSPVQLGWAVSFSSPPDDYVARWARLNYHITLLTMAGNEGGAY 196 (350)
T ss_pred cCCceeehHHHHHHHhhcCchhHhhcCCceEeccccccchhhhcceeccccCchhhHHHHHhcCeEEEEEEeeecccchh
Confidence 99986655433 11 1 2 24566776655443211110 00000000 00000 0000000 00
Q ss_pred HHHHHHHhhhhcC--CCCh--hhhhhhhheeeeEEEcCCCccCCHHHHHHHHHHhc---CCceEEEecCCCcceee-cch
Q 024228 177 ALKVQFDIACYKL--PTLP--AFVYKHILEKIHLLWGENDKIFDMQVARNLKEQVG---QNATMESIEKAGHLVNL-ERP 248 (270)
Q Consensus 177 ~~~~~~~~~~~~~--~~~~--~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~~~-~~~ 248 (270)
.+...+....... .... .........+.+.+.+..|.++|.+..+++.+... .+.+.+-+.++-|..+. ..|
T Consensus 197 ~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r~~p 276 (350)
T KOG2521|consen 197 LLGPLAEKISMSRKYHFLDRYEEQRNELPWNQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHFRSFP 276 (350)
T ss_pred hhhhhhhccccccchHHHHHHHhhhhcccccceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeeeccCc
Confidence 0000000000000 0000 00111112788999999999999999888855543 24555666788999977 689
Q ss_pred HhHHHHHHHHHHhhhhh
Q 024228 249 FVYNRQLKTILASLVHA 265 (270)
Q Consensus 249 ~~~~~~i~~fl~~~~~~ 265 (270)
..+.+...+|++.....
T Consensus 277 ~~y~~~~~~Fl~~~~~~ 293 (350)
T KOG2521|consen 277 KTYLKKCSEFLRSVISS 293 (350)
T ss_pred HHHHHHHHHHHHhcccc
Confidence 99999999999887543
No 207
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=97.14 E-value=0.047 Score=38.61 Aligned_cols=53 Identities=28% Similarity=0.113 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHHhC-----CCceEEEEEchhHHHHHHHHhhCccccccEEEecccCC
Q 024228 96 SFQAECMAKGLRKLG-----VEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMG 148 (270)
Q Consensus 96 ~~~~~~~~~~l~~~~-----~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~ 148 (270)
+.-+.+|..+++.+. ..++.++|||+|+.++-.++...+..+..+|+++++..
T Consensus 88 ~~ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG~ 145 (177)
T PF06259_consen 88 RAGAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPGM 145 (177)
T ss_pred HHHHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCCC
Confidence 344566777766653 33789999999999999888886678999999987654
No 208
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=97.14 E-value=0.0016 Score=48.06 Aligned_cols=47 Identities=19% Similarity=0.048 Sum_probs=34.5
Q ss_pred HHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCc----cccccEEEecccCC
Q 024228 101 CMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYP----DLVESMVVTCSVMG 148 (270)
Q Consensus 101 ~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p----~~v~~~i~~~~~~~ 148 (270)
-+..+++..+ +++.+.|||.||.+|..++...+ ++|.++...+++..
T Consensus 74 yl~~~~~~~~-~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPGf 124 (224)
T PF11187_consen 74 YLKKIAKKYP-GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPGF 124 (224)
T ss_pred HHHHHHHhCC-CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCCC
Confidence 3444444444 36999999999999999888743 47888888777654
No 209
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=97.14 E-value=0.0053 Score=52.16 Aligned_cols=118 Identities=18% Similarity=0.157 Sum_probs=69.0
Q ss_pred cCCeEEEEEecCCCCC--CceEEEeCCCCCcccc--cHH--HHHHHhhcc-ceEEeecCC----CC---CCCCCCCCCCC
Q 024228 29 EPGTILNIWVPKKTTK--KHAVVLLHPFGFDGIL--TWQ--FQVLALAKT-YEVYVPDFL----FF---GSSVTDRPDRT 94 (270)
Q Consensus 29 ~~g~~l~~~~~~~~~~--~~~vv~~hG~~~~~~~--~~~--~~~~~l~~~-~~v~~~d~~----g~---G~s~~~~~~~~ 94 (270)
+|...+.++.+..... -|++|++||++..... .+. .....+..+ .-|+.+.+| |+ |.+. .+....
T Consensus 94 EDCLylNV~tp~~~~~~~~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~-~~gN~g 172 (545)
T KOG1516|consen 94 EDCLYLNVYTPQGCSESKLPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSA-APGNLG 172 (545)
T ss_pred CCCceEEEeccCCCccCCCCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCC-CCCccc
Confidence 3777888888776433 6999999998754331 221 112223333 778888887 22 2222 233344
Q ss_pred hHHHHHH---HHHHHHHhC--CCceEEEEEchhHHHHHHHHhhC--ccccccEEEecccC
Q 024228 95 ASFQAEC---MAKGLRKLG--VEKCTLVGVSYGGMVGFKMAEMY--PDLVESMVVTCSVM 147 (270)
Q Consensus 95 ~~~~~~~---~~~~l~~~~--~~~~~l~G~S~Gg~~a~~~a~~~--p~~v~~~i~~~~~~ 147 (270)
+.++... +..-|...+ .++|.|+|||.||..+..+...- ...+.++|..++..
T Consensus 173 l~Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~ 232 (545)
T KOG1516|consen 173 LFDQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNA 232 (545)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhcccc
Confidence 4444333 334444444 45899999999999887655421 23566666666554
No 210
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=97.06 E-value=0.00082 Score=53.78 Aligned_cols=85 Identities=18% Similarity=0.161 Sum_probs=51.2
Q ss_pred cHHHHHHHhhcc-ce------EEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhC
Q 024228 61 TWQFQVLALAKT-YE------VYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMY 133 (270)
Q Consensus 61 ~~~~~~~~l~~~-~~------v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 133 (270)
.|..+++.|..- |. -..+|+|-.- ......+..+..+..-++...+.-+.++++|++||||+.+.+.+....
T Consensus 125 ~w~~~i~~lv~~GYe~~~~l~ga~YDwRls~-~~~e~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyFl~w~ 203 (473)
T KOG2369|consen 125 YWHELIENLVGIGYERGKTLFGAPYDWRLSY-HNSEERDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYFLKWV 203 (473)
T ss_pred HHHHHHHHHHhhCcccCceeeccccchhhcc-CChhHHHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHHHhcc
Confidence 667777777643 43 4566777211 111111223333333444444444668999999999999999998887
Q ss_pred cc--------ccccEEEeccc
Q 024228 134 PD--------LVESMVVTCSV 146 (270)
Q Consensus 134 p~--------~v~~~i~~~~~ 146 (270)
++ .|++++-++++
T Consensus 204 ~~~~~~W~~k~I~sfvnig~p 224 (473)
T KOG2369|consen 204 EAEGPAWCDKYIKSFVNIGAP 224 (473)
T ss_pred cccchhHHHHHHHHHHccCch
Confidence 65 36666666554
No 211
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=97.06 E-value=0.032 Score=50.31 Aligned_cols=96 Identities=17% Similarity=0.211 Sum_probs=66.2
Q ss_pred CCCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCC-CCCCCCCChHHHHHHHHHHHHHhCC-CceEEEEEc
Q 024228 43 TKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSS-VTDRPDRTASFQAECMAKGLRKLGV-EKCTLVGVS 120 (270)
Q Consensus 43 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s-~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~l~G~S 120 (270)
...|+++|+|.+-+... .+..++..|. + |.+|.- ....+..+++..+.-...-++++.. .+..++|+|
T Consensus 2121 se~~~~Ffv~pIEG~tt-~l~~la~rle--~-------PaYglQ~T~~vP~dSies~A~~yirqirkvQP~GPYrl~GYS 2190 (2376)
T KOG1202|consen 2121 SEEPPLFFVHPIEGFTT-ALESLASRLE--I-------PAYGLQCTEAVPLDSIESLAAYYIRQIRKVQPEGPYRLAGYS 2190 (2376)
T ss_pred ccCCceEEEeccccchH-HHHHHHhhcC--C-------cchhhhccccCCcchHHHHHHHHHHHHHhcCCCCCeeeeccc
Confidence 45799999999888776 6665555443 2 333322 2233446777777777777777654 589999999
Q ss_pred hhHHHHHHHHhhCc--cccccEEEecccCC
Q 024228 121 YGGMVGFKMAEMYP--DLVESMVVTCSVMG 148 (270)
Q Consensus 121 ~Gg~~a~~~a~~~p--~~v~~~i~~~~~~~ 148 (270)
+|+.++..+|.... +....+|++++.+.
T Consensus 2191 yG~~l~f~ma~~Lqe~~~~~~lillDGspt 2220 (2376)
T KOG1202|consen 2191 YGACLAFEMASQLQEQQSPAPLILLDGSPT 2220 (2376)
T ss_pred hhHHHHHHHHHHHHhhcCCCcEEEecCchH
Confidence 99999999887542 23566888887654
No 212
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=97.01 E-value=0.0037 Score=52.01 Aligned_cols=84 Identities=14% Similarity=0.193 Sum_probs=52.5
Q ss_pred cHHHHHHHhhcc-ce-----EEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHh----CCCceEEEEEchhHHHHHHHH
Q 024228 61 TWQFQVLALAKT-YE-----VYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKL----GVEKCTLVGVSYGGMVGFKMA 130 (270)
Q Consensus 61 ~~~~~~~~l~~~-~~-----v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~l~G~S~Gg~~a~~~a 130 (270)
.|..+++.|++. |. ...+|+|- +.. .....+.+...+...|+.. +.++++|+||||||.+++.+.
T Consensus 157 vw~kLIe~L~~iGY~~~nL~gAPYDWRl---s~~--~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL 231 (642)
T PLN02517 157 VWAVLIANLARIGYEEKNMYMAAYDWRL---SFQ--NTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFM 231 (642)
T ss_pred eHHHHHHHHHHcCCCCCceeeccccccc---Ccc--chhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHH
Confidence 668888888876 54 33344441 110 0112244445555555533 357999999999999999876
Q ss_pred hhCc---------------cccccEEEecccCCC
Q 024228 131 EMYP---------------DLVESMVVTCSVMGL 149 (270)
Q Consensus 131 ~~~p---------------~~v~~~i~~~~~~~~ 149 (270)
.... ..|++.|.++++...
T Consensus 232 ~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~lG 265 (642)
T PLN02517 232 KWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPFLG 265 (642)
T ss_pred HhccccccccCCcchHHHHHHHHHheecccccCC
Confidence 6321 248899999887543
No 213
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.98 E-value=0.0093 Score=40.59 Aligned_cols=79 Identities=16% Similarity=0.119 Sum_probs=51.6
Q ss_pred CceEEEeCCCCCcccccHHHHHHHhhccc-eEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEEchhH
Q 024228 45 KHAVVLLHPFGFDGILTWQFQVLALAKTY-EVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVSYGG 123 (270)
Q Consensus 45 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~~-~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg 123 (270)
...||++-|++..+. .+..+. +.+++ -++++|++... -+.++. ..+.+.|+++|||-
T Consensus 11 d~LIvyFaGwgtpps-~v~HLi--lpeN~dl~lcYDY~dl~------ldfDfs-------------Ay~hirlvAwSMGV 68 (214)
T COG2830 11 DHLIVYFAGWGTPPS-AVNHLI--LPENHDLLLCYDYQDLN------LDFDFS-------------AYRHIRLVAWSMGV 68 (214)
T ss_pred CEEEEEEecCCCCHH-HHhhcc--CCCCCcEEEEeehhhcC------cccchh-------------hhhhhhhhhhhHHH
Confidence 347888899988877 544332 33443 56888987321 111211 12467899999999
Q ss_pred HHHHHHHhhCccccccEEEecccC
Q 024228 124 MVGFKMAEMYPDLVESMVVTCSVM 147 (270)
Q Consensus 124 ~~a~~~a~~~p~~v~~~i~~~~~~ 147 (270)
.+|-++....+ ++..+.+++..
T Consensus 69 wvAeR~lqg~~--lksatAiNGTg 90 (214)
T COG2830 69 WVAERVLQGIR--LKSATAINGTG 90 (214)
T ss_pred HHHHHHHhhcc--ccceeeecCCC
Confidence 99999888764 67767766543
No 214
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.98 E-value=0.0016 Score=48.57 Aligned_cols=24 Identities=25% Similarity=0.171 Sum_probs=20.2
Q ss_pred CCCceEEEEEchhHHHHHHHHhhC
Q 024228 110 GVEKCTLVGVSYGGMVGFKMAEMY 133 (270)
Q Consensus 110 ~~~~~~l~G~S~Gg~~a~~~a~~~ 133 (270)
...++++.|||+||.+|..++...
T Consensus 126 p~~~i~vtGHSLGGaiA~l~a~~l 149 (229)
T cd00519 126 PDYKIIVTGHSLGGALASLLALDL 149 (229)
T ss_pred CCceEEEEccCHHHHHHHHHHHHH
Confidence 456899999999999998887753
No 215
>PLN02162 triacylglycerol lipase
Probab=96.82 E-value=0.0043 Score=50.08 Aligned_cols=34 Identities=21% Similarity=0.218 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHh
Q 024228 98 QAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAE 131 (270)
Q Consensus 98 ~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~ 131 (270)
+.+.+.+.+.+....++++.|||+||.+|..+|.
T Consensus 264 I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 264 IRQMLRDKLARNKNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHhCCCceEEEEecChHHHHHHHHHH
Confidence 3445555665555568999999999999988765
No 216
>PLN00413 triacylglycerol lipase
Probab=96.76 E-value=0.0054 Score=49.68 Aligned_cols=35 Identities=17% Similarity=0.185 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHh
Q 024228 97 FQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAE 131 (270)
Q Consensus 97 ~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~ 131 (270)
.+.+.+.++++.....++++.|||+||.+|..+|.
T Consensus 269 ~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 269 TILRHLKEIFDQNPTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHH
Confidence 44566777777776678999999999999998875
No 217
>PLN02571 triacylglycerol lipase
Probab=96.62 E-value=0.0039 Score=49.84 Aligned_cols=37 Identities=19% Similarity=0.086 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHHhCCC--ceEEEEEchhHHHHHHHHhh
Q 024228 96 SFQAECMAKGLRKLGVE--KCTLVGVSYGGMVGFKMAEM 132 (270)
Q Consensus 96 ~~~~~~~~~~l~~~~~~--~~~l~G~S~Gg~~a~~~a~~ 132 (270)
+++..++..+++....+ ++++.|||+||.+|..+|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 44566677777666433 68999999999999988864
No 218
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=96.61 E-value=0.009 Score=38.66 Aligned_cols=47 Identities=15% Similarity=0.152 Sum_probs=27.2
Q ss_pred ccCCceeEEEeecCCeEEEEEecCC-CCCCceEEEeCCCCCcccccHHHH
Q 024228 17 KLVGMTQRTIEIEPGTILNIWVPKK-TTKKHAVVLLHPFGFDGILTWQFQ 65 (270)
Q Consensus 17 ~~~~~~~~~i~~~~g~~l~~~~~~~-~~~~~~vv~~hG~~~~~~~~~~~~ 65 (270)
....+..-...+ +|..||+....+ .++..+||++||++++-. .|..+
T Consensus 64 ~lN~~phf~t~I-~g~~iHFih~rs~~~~aiPLll~HGWPgSf~-Ef~~v 111 (112)
T PF06441_consen 64 RLNSFPHFKTEI-DGLDIHFIHVRSKRPNAIPLLLLHGWPGSFL-EFLKV 111 (112)
T ss_dssp HHTTS-EEEEEE-TTEEEEEEEE--S-TT-EEEEEE--SS--GG-GGHHH
T ss_pred HHHcCCCeeEEE-eeEEEEEEEeeCCCCCCeEEEEECCCCccHH-hHHhh
Confidence 334555666667 699999865544 345679999999999877 55543
No 219
>PLN02454 triacylglycerol lipase
Probab=96.60 E-value=0.0045 Score=49.44 Aligned_cols=33 Identities=21% Similarity=0.114 Sum_probs=23.4
Q ss_pred HHHHHHHHHhCCC--ceEEEEEchhHHHHHHHHhh
Q 024228 100 ECMAKGLRKLGVE--KCTLVGVSYGGMVGFKMAEM 132 (270)
Q Consensus 100 ~~~~~~l~~~~~~--~~~l~G~S~Gg~~a~~~a~~ 132 (270)
..+..+++..... ++++.|||+||.+|+.+|..
T Consensus 214 ~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 214 AKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 3344444444433 49999999999999998864
No 220
>PLN02408 phospholipase A1
Probab=96.38 E-value=0.0069 Score=47.74 Aligned_cols=36 Identities=28% Similarity=0.234 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHhCCC--ceEEEEEchhHHHHHHHHhhC
Q 024228 98 QAECMAKGLRKLGVE--KCTLVGVSYGGMVGFKMAEMY 133 (270)
Q Consensus 98 ~~~~~~~~l~~~~~~--~~~l~G~S~Gg~~a~~~a~~~ 133 (270)
+.+.+..+++..+.+ ++++.|||+||.+|..+|...
T Consensus 184 Vl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl 221 (365)
T PLN02408 184 VREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDI 221 (365)
T ss_pred HHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHH
Confidence 445566666665533 589999999999999888753
No 221
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=96.35 E-value=0.012 Score=41.96 Aligned_cols=74 Identities=14% Similarity=0.027 Sum_probs=42.5
Q ss_pred ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHH----HhCCCceEEEEEchhHHHHHHHHhh--C----ccccccEEE
Q 024228 73 YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLR----KLGVEKCTLVGVSYGGMVGFKMAEM--Y----PDLVESMVV 142 (270)
Q Consensus 73 ~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~----~~~~~~~~l~G~S~Gg~~a~~~a~~--~----p~~v~~~i~ 142 (270)
..+..++||-..... ....+...-+.++...++ .-...+++|+|+|.||.++..++.. . .++|.++++
T Consensus 40 ~~~~~V~YpA~~~~~--~y~~S~~~G~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvl 117 (179)
T PF01083_consen 40 VAVQGVEYPASLGPN--SYGDSVAAGVANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVL 117 (179)
T ss_dssp EEEEE--S---SCGG--SCHHHHHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEE
T ss_pred eEEEecCCCCCCCcc--cccccHHHHHHHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEE
Confidence 667777887432221 011122223344444443 3355689999999999999999877 2 357889888
Q ss_pred ecccCC
Q 024228 143 TCSVMG 148 (270)
Q Consensus 143 ~~~~~~ 148 (270)
++-+..
T Consensus 118 fGdP~~ 123 (179)
T PF01083_consen 118 FGDPRR 123 (179)
T ss_dssp ES-TTT
T ss_pred ecCCcc
Confidence 875543
No 222
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=96.34 E-value=0.0074 Score=47.62 Aligned_cols=87 Identities=24% Similarity=0.194 Sum_probs=50.2
Q ss_pred CCCceEEEeCCCCC-cccccHHHHHHHhhccceEEeecCCCCCCCCCCCCC---CChHHHHHHHHHHHHHhCCCceEEEE
Q 024228 43 TKKHAVVLLHPFGF-DGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPD---RTASFQAECMAKGLRKLGVEKCTLVG 118 (270)
Q Consensus 43 ~~~~~vv~~hG~~~-~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~l~G 118 (270)
+++-.+|+.||+.+ +.. +|...+....+.+.=..+..+|.-..-....+ .--...++++.+.+....++++-++|
T Consensus 78 k~~HLvVlthGi~~~~~~-~~~~~~~~~~kk~p~~~iv~~g~~~~~~~T~~Gv~~lG~Rla~~~~e~~~~~si~kISfvg 156 (405)
T KOG4372|consen 78 KPKHLVVLTHGLHGADME-YWKEKIEQMTKKMPDKLIVVRGKMNNMCQTFDGVDVLGERLAEEVKETLYDYSIEKISFVG 156 (405)
T ss_pred CCceEEEeccccccccHH-HHHHHHHhhhcCCCcceEeeeccccchhhccccceeeecccHHHHhhhhhccccceeeeee
Confidence 34568999999988 444 77666666665522213333333222111111 11122345555555555578999999
Q ss_pred EchhHHHHHHHH
Q 024228 119 VSYGGMVGFKMA 130 (270)
Q Consensus 119 ~S~Gg~~a~~~a 130 (270)
||+||.++..+.
T Consensus 157 hSLGGLvar~AI 168 (405)
T KOG4372|consen 157 HSLGGLVARYAI 168 (405)
T ss_pred eecCCeeeeEEE
Confidence 999998876443
No 223
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=96.32 E-value=0.037 Score=42.38 Aligned_cols=125 Identities=14% Similarity=0.055 Sum_probs=80.8
Q ss_pred EEeecCCeEEEEEecC----CCCCCceEEEeCCCCCccc---ccHHHHHHH----------hhccceEEeecCC-CCCCC
Q 024228 25 TIEIEPGTILNIWVPK----KTTKKHAVVLLHPFGFDGI---LTWQFQVLA----------LAKTYEVYVPDFL-FFGSS 86 (270)
Q Consensus 25 ~i~~~~g~~l~~~~~~----~~~~~~~vv~~hG~~~~~~---~~~~~~~~~----------l~~~~~v~~~d~~-g~G~s 86 (270)
++++.++..+.+|..- .....|..+.+.|.++.+. ..|+.+-+. .-+...++.+|-| |.|.|
T Consensus 7 ~v~vr~~a~~F~wly~~~~~~ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk~adllfvDnPVGaGfS 86 (414)
T KOG1283|consen 7 YVDVRTGAHMFWWLYYATANVKSERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLKDADLLFVDNPVGAGFS 86 (414)
T ss_pred ceeeecCceEEEEEeeeccccccCCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhhhccEEEecCCCcCcee
Confidence 4555567666654432 2245788889999877655 233333211 1223567788876 77777
Q ss_pred CCCCCC---CChHHHHHHHHHHHHHh-------CCCceEEEEEchhHHHHHHHHhhCcc---------ccccEEEecccC
Q 024228 87 VTDRPD---RTASFQAECMAKGLRKL-------GVEKCTLVGVSYGGMVGFKMAEMYPD---------LVESMVVTCSVM 147 (270)
Q Consensus 87 ~~~~~~---~~~~~~~~~~~~~l~~~-------~~~~~~l~G~S~Gg~~a~~~a~~~p~---------~v~~~i~~~~~~ 147 (270)
-..... .+.++.+.|+.++++.+ ...+++++..|+||-+|...+...-+ .+.++++-+++.
T Consensus 87 yVdg~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDSWI 166 (414)
T KOG1283|consen 87 YVDGSSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDSWI 166 (414)
T ss_pred eecCcccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCccc
Confidence 543322 56778899999999875 34589999999999999888765322 355667766665
Q ss_pred CC
Q 024228 148 GL 149 (270)
Q Consensus 148 ~~ 149 (270)
.+
T Consensus 167 SP 168 (414)
T KOG1283|consen 167 SP 168 (414)
T ss_pred Ch
Confidence 43
No 224
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=96.26 E-value=0.013 Score=42.35 Aligned_cols=67 Identities=16% Similarity=0.071 Sum_probs=41.6
Q ss_pred HHhhccceEEeecCCCCCCCCCC-----CC----CCChHHHHHHHHHHHHHhCC-CceEEEEEchhHHHHHHHHhhC
Q 024228 67 LALAKTYEVYVPDFLFFGSSVTD-----RP----DRTASFQAECMAKGLRKLGV-EKCTLVGVSYGGMVGFKMAEMY 133 (270)
Q Consensus 67 ~~l~~~~~v~~~d~~g~G~s~~~-----~~----~~~~~~~~~~~~~~l~~~~~-~~~~l~G~S~Gg~~a~~~a~~~ 133 (270)
..+....+|+++=||=-...... .. .....+..+....+|++.+. ++++|+|||.|+.+..++..+.
T Consensus 40 s~F~~~~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 40 SAFNGVCNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred hhhhcCCccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 34544588888887732111111 11 12333444455566666654 4899999999999999998875
No 225
>PLN02934 triacylglycerol lipase
Probab=96.08 E-value=0.012 Score=48.14 Aligned_cols=35 Identities=17% Similarity=0.195 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHh
Q 024228 97 FQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAE 131 (270)
Q Consensus 97 ~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~ 131 (270)
.....+..+++.....++++.|||+||.+|..+|.
T Consensus 306 ~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 306 AVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHH
Confidence 34556667777766678999999999999998874
No 226
>PLN02310 triacylglycerol lipase
Probab=96.05 E-value=0.022 Score=45.61 Aligned_cols=37 Identities=16% Similarity=0.070 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHhC----CCceEEEEEchhHHHHHHHHhh
Q 024228 96 SFQAECMAKGLRKLG----VEKCTLVGVSYGGMVGFKMAEM 132 (270)
Q Consensus 96 ~~~~~~~~~~l~~~~----~~~~~l~G~S~Gg~~a~~~a~~ 132 (270)
+++.+.+..+++.+. ..++.+.|||+||.+|..+|..
T Consensus 189 ~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 189 EQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 344556666666553 1378999999999999988754
No 227
>PLN02324 triacylglycerol lipase
Probab=96.04 E-value=0.012 Score=47.00 Aligned_cols=35 Identities=20% Similarity=0.143 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHhCCC--ceEEEEEchhHHHHHHHHhh
Q 024228 98 QAECMAKGLRKLGVE--KCTLVGVSYGGMVGFKMAEM 132 (270)
Q Consensus 98 ~~~~~~~~l~~~~~~--~~~l~G~S~Gg~~a~~~a~~ 132 (270)
+.+.+..+++....+ +|++.|||+||.+|..+|..
T Consensus 199 Vl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 199 VQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 445566666665432 69999999999999988864
No 228
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=96.02 E-value=0.031 Score=43.96 Aligned_cols=41 Identities=29% Similarity=0.310 Sum_probs=31.9
Q ss_pred CCCceEEEEEchhHHHHHHHHhhCcc-----ccccEEEecccCCCC
Q 024228 110 GVEKCTLVGVSYGGMVGFKMAEMYPD-----LVESMVVTCSVMGLT 150 (270)
Q Consensus 110 ~~~~~~l~G~S~Gg~~a~~~a~~~p~-----~v~~~i~~~~~~~~~ 150 (270)
+.+|+.|+|||+|+.+...+.....+ .|+.+++++.+....
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~~ 263 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPSD 263 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCCC
Confidence 55689999999999998877665443 388999998776543
No 229
>PLN02802 triacylglycerol lipase
Probab=95.83 E-value=0.017 Score=47.24 Aligned_cols=37 Identities=19% Similarity=0.185 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHhCCC--ceEEEEEchhHHHHHHHHhhC
Q 024228 97 FQAECMAKGLRKLGVE--KCTLVGVSYGGMVGFKMAEMY 133 (270)
Q Consensus 97 ~~~~~~~~~l~~~~~~--~~~l~G~S~Gg~~a~~~a~~~ 133 (270)
++.+.+..+++....+ +|++.|||+||.+|..+|...
T Consensus 313 qVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~dL 351 (509)
T PLN02802 313 SVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADEL 351 (509)
T ss_pred HHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHHH
Confidence 3445556666655432 689999999999999887653
No 230
>PLN02753 triacylglycerol lipase
Probab=95.69 E-value=0.021 Score=46.99 Aligned_cols=36 Identities=19% Similarity=0.115 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHhCC-----CceEEEEEchhHHHHHHHHhh
Q 024228 97 FQAECMAKGLRKLGV-----EKCTLVGVSYGGMVGFKMAEM 132 (270)
Q Consensus 97 ~~~~~~~~~l~~~~~-----~~~~l~G~S~Gg~~a~~~a~~ 132 (270)
++...+..+++..+. -++.+.|||+||.+|...|..
T Consensus 292 QVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 292 QILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred HHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHH
Confidence 344455566665532 379999999999999988753
No 231
>PLN03037 lipase class 3 family protein; Provisional
Probab=95.56 E-value=0.024 Score=46.55 Aligned_cols=36 Identities=19% Similarity=0.114 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHhC----CCceEEEEEchhHHHHHHHHhh
Q 024228 97 FQAECMAKGLRKLG----VEKCTLVGVSYGGMVGFKMAEM 132 (270)
Q Consensus 97 ~~~~~~~~~l~~~~----~~~~~l~G~S~Gg~~a~~~a~~ 132 (270)
+..+++..+++.+. ..++.+.|||+||.+|...|..
T Consensus 299 QVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 299 QVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 44566677776653 1269999999999999988754
No 232
>PLN02719 triacylglycerol lipase
Probab=95.51 E-value=0.027 Score=46.25 Aligned_cols=35 Identities=20% Similarity=0.171 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHhCC-----CceEEEEEchhHHHHHHHHhh
Q 024228 98 QAECMAKGLRKLGV-----EKCTLVGVSYGGMVGFKMAEM 132 (270)
Q Consensus 98 ~~~~~~~~l~~~~~-----~~~~l~G~S~Gg~~a~~~a~~ 132 (270)
+...+..+++.... .++.+.|||+||.+|..+|..
T Consensus 279 Vl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 279 VLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 44455555555432 279999999999999988754
No 233
>PLN02761 lipase class 3 family protein
Probab=95.44 E-value=0.028 Score=46.29 Aligned_cols=35 Identities=17% Similarity=0.098 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHhC------CCceEEEEEchhHHHHHHHHh
Q 024228 97 FQAECMAKGLRKLG------VEKCTLVGVSYGGMVGFKMAE 131 (270)
Q Consensus 97 ~~~~~~~~~l~~~~------~~~~~l~G~S~Gg~~a~~~a~ 131 (270)
++...|..+++... .-++.+.|||+||.+|...|.
T Consensus 273 qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 273 QVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 34555666666552 126999999999999998875
No 234
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=95.30 E-value=0.034 Score=44.00 Aligned_cols=37 Identities=16% Similarity=-0.023 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhh
Q 024228 96 SFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEM 132 (270)
Q Consensus 96 ~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~ 132 (270)
..+.+++..+++....-++.+.|||+||.+|..+|..
T Consensus 155 ~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHH
Confidence 5667788888888886789999999999999988765
No 235
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=95.26 E-value=0.045 Score=38.88 Aligned_cols=60 Identities=10% Similarity=0.060 Sum_probs=46.4
Q ss_pred eeeeEEEcCCCccCCHHHHHHHHHHh---c-CCceEEEecCCCcceeecch---HhHHHHHHHHHHh
Q 024228 202 EKIHLLWGENDKIFDMQVARNLKEQV---G-QNATMESIEKAGHLVNLERP---FVYNRQLKTILAS 261 (270)
Q Consensus 202 ~P~l~i~g~~D~~~~~~~~~~~~~~~---~-~~~~~~~~~~~gH~~~~~~~---~~~~~~i~~fl~~ 261 (270)
+++|-|-|+.|.+..+.+.......+ + .....++.+|+||+..+.-+ +++...|.+|+.+
T Consensus 135 taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~ 201 (202)
T PF06850_consen 135 TALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQ 201 (202)
T ss_pred ceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHh
Confidence 78888999999999887766555543 3 23567788999999987543 6788889999875
No 236
>PF03283 PAE: Pectinacetylesterase
Probab=95.24 E-value=0.18 Score=40.27 Aligned_cols=22 Identities=27% Similarity=0.422 Sum_probs=17.6
Q ss_pred CCceEEEEEchhHHHHHHHHhh
Q 024228 111 VEKCTLVGVSYGGMVGFKMAEM 132 (270)
Q Consensus 111 ~~~~~l~G~S~Gg~~a~~~a~~ 132 (270)
.++++|.|.|.||.-++..+..
T Consensus 155 a~~vlltG~SAGG~g~~~~~d~ 176 (361)
T PF03283_consen 155 AKQVLLTGCSAGGLGAILHADY 176 (361)
T ss_pred cceEEEeccChHHHHHHHHHHH
Confidence 4579999999999888775543
No 237
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=95.11 E-value=0.021 Score=47.30 Aligned_cols=110 Identities=17% Similarity=0.191 Sum_probs=59.4
Q ss_pred EEEEecCCCCCCceEEEeCCCCCccc--ccHHHHHHHhhcc--ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHH--
Q 024228 34 LNIWVPKKTTKKHAVVLLHPFGFDGI--LTWQFQVLALAKT--YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLR-- 107 (270)
Q Consensus 34 l~~~~~~~~~~~~~vv~~hG~~~~~~--~~~~~~~~~l~~~--~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~-- 107 (270)
+..|....+.++-.|+-+||+|.-.. ..-+...+.+++. ..|+.+||----+.+.+ ...++..-....+|.
T Consensus 385 ~~~wh~P~p~S~sli~HcHGGGfVAqsSkSHE~YLr~Wa~aL~cPiiSVdYSLAPEaPFP---RaleEv~fAYcW~inn~ 461 (880)
T KOG4388|consen 385 LELWHRPAPRSRSLIVHCHGGGFVAQSSKSHEPYLRSWAQALGCPIISVDYSLAPEAPFP---RALEEVFFAYCWAINNC 461 (880)
T ss_pred cccCCCCCCCCceEEEEecCCceeeeccccccHHHHHHHHHhCCCeEEeeeccCCCCCCC---cHHHHHHHHHHHHhcCH
Confidence 33444443345667888999884322 1222333334433 78999998633332222 223333222222332
Q ss_pred -HhC--CCceEEEEEchhHHHHHHHHhh----CccccccEEEeccc
Q 024228 108 -KLG--VEKCTLVGVSYGGMVGFKMAEM----YPDLVESMVVTCSV 146 (270)
Q Consensus 108 -~~~--~~~~~l~G~S~Gg~~a~~~a~~----~p~~v~~~i~~~~~ 146 (270)
.++ .++|+++|-|.||.++...|.+ .-..-+++++..++
T Consensus 462 allG~TgEriv~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~p 507 (880)
T KOG4388|consen 462 ALLGSTGERIVLAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYPP 507 (880)
T ss_pred HHhCcccceEEEeccCCCcceeehhHHHHHHhCCCCCCceEEecCh
Confidence 233 4799999999999876555443 22224677766554
No 238
>PLN02847 triacylglycerol lipase
Probab=94.38 E-value=0.089 Score=44.15 Aligned_cols=24 Identities=25% Similarity=0.221 Sum_probs=19.3
Q ss_pred hCCCceEEEEEchhHHHHHHHHhh
Q 024228 109 LGVEKCTLVGVSYGGMVGFKMAEM 132 (270)
Q Consensus 109 ~~~~~~~l~G~S~Gg~~a~~~a~~ 132 (270)
...-+++++|||+||.+|..++..
T Consensus 248 ~PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 248 YPDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred CCCCeEEEeccChHHHHHHHHHHH
Confidence 333489999999999999887664
No 239
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=94.15 E-value=0.6 Score=29.61 Aligned_cols=82 Identities=16% Similarity=0.175 Sum_probs=55.8
Q ss_pred cHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCCh-HHHHHHHHHHHHHhCCCceEEEEEchhH--HHHHHHHhhCccc
Q 024228 61 TWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTA-SFQAECMAKGLRKLGVEKCTLVGVSYGG--MVGFKMAEMYPDL 136 (270)
Q Consensus 61 ~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~l~G~S~Gg--~~a~~~a~~~p~~ 136 (270)
.|..+.+.+..+ +..=.+.++..|.+......... +.-...+..+++.+...+++++|-|--. -+-..+|.++|++
T Consensus 12 ly~~l~~Fl~~~~~P~G~~~Lr~~~~~~~~~~~~~~~~~K~~~i~~i~~~fP~~kfiLIGDsgq~DpeiY~~ia~~~P~~ 91 (100)
T PF09949_consen 12 LYPFLRDFLRRNGFPAGPLLLRDYGPSLSGLFKSGAEEHKRDNIERILRDFPERKFILIGDSGQHDPEIYAEIARRFPGR 91 (100)
T ss_pred HHHHHHHHHHhcCCCCCceEcccCCccccccccCCchhHHHHHHHHHHHHCCCCcEEEEeeCCCcCHHHHHHHHHHCCCC
Confidence 555566777665 66666666666554322211122 3456778889999998999999999654 4555678899999
Q ss_pred cccEEE
Q 024228 137 VESMVV 142 (270)
Q Consensus 137 v~~~i~ 142 (270)
|.++.+
T Consensus 92 i~ai~I 97 (100)
T PF09949_consen 92 ILAIYI 97 (100)
T ss_pred EEEEEE
Confidence 998754
No 240
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=92.99 E-value=0.26 Score=37.29 Aligned_cols=40 Identities=15% Similarity=0.145 Sum_probs=27.9
Q ss_pred HHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecc
Q 024228 104 KGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCS 145 (270)
Q Consensus 104 ~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~ 145 (270)
.+.+.....++.|.|||+||.+|..+..++. +-.+.+-+|
T Consensus 268 ~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg--lP~VaFesP 307 (425)
T COG5153 268 AVRRIYPDARIWLTGHSLGGAIASLLGIRFG--LPVVAFESP 307 (425)
T ss_pred HHHHhCCCceEEEeccccchHHHHHhccccC--CceEEecCc
Confidence 3334445568999999999999998888774 444444443
No 241
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=92.99 E-value=0.26 Score=37.29 Aligned_cols=40 Identities=15% Similarity=0.145 Sum_probs=27.9
Q ss_pred HHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecc
Q 024228 104 KGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCS 145 (270)
Q Consensus 104 ~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~ 145 (270)
.+.+.....++.|.|||+||.+|..+..++. +-.+.+-+|
T Consensus 268 ~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg--lP~VaFesP 307 (425)
T KOG4540|consen 268 AVRRIYPDARIWLTGHSLGGAIASLLGIRFG--LPVVAFESP 307 (425)
T ss_pred HHHHhCCCceEEEeccccchHHHHHhccccC--CceEEecCc
Confidence 3334445568999999999999998888774 444444443
No 242
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=92.01 E-value=0.99 Score=33.53 Aligned_cols=61 Identities=15% Similarity=0.131 Sum_probs=37.4
Q ss_pred ceEEeecCCCC-CC---CCCCCCCCChHHHHHHHHHHHHHh--CCCceEEEEEchhHHHHHHHHhhC
Q 024228 73 YEVYVPDFLFF-GS---SVTDRPDRTASFQAECMAKGLRKL--GVEKCTLVGVSYGGMVGFKMAEMY 133 (270)
Q Consensus 73 ~~v~~~d~~g~-G~---s~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~l~G~S~Gg~~a~~~a~~~ 133 (270)
+.+..+++|.. +- -.....+.+..+=++.+.+.++.. ..++++++|+|+|+.++..++.+.
T Consensus 3 ~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l 69 (225)
T PF08237_consen 3 YNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRL 69 (225)
T ss_pred cceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHH
Confidence 45566677651 11 011122345555556666666652 346899999999999998877654
No 243
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=90.04 E-value=0.67 Score=39.02 Aligned_cols=49 Identities=18% Similarity=0.264 Sum_probs=30.8
Q ss_pred HHHHHHHHHHhC---CCceEEEEEchhHHHHHHHHhh-----Ccc------ccccEEEecccC
Q 024228 99 AECMAKGLRKLG---VEKCTLVGVSYGGMVGFKMAEM-----YPD------LVESMVVTCSVM 147 (270)
Q Consensus 99 ~~~~~~~l~~~~---~~~~~l~G~S~Gg~~a~~~a~~-----~p~------~v~~~i~~~~~~ 147 (270)
...+.+.+.+.+ ..+++.+||||||.++=.+... .|+ .-.++|+++.+.
T Consensus 510 s~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~PH 572 (697)
T KOG2029|consen 510 SNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVPH 572 (697)
T ss_pred HHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecCC
Confidence 334444444433 3479999999999888665543 232 256778777653
No 244
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=89.13 E-value=1.8 Score=35.83 Aligned_cols=116 Identities=15% Similarity=0.124 Sum_probs=61.8
Q ss_pred CCeEEEEEecCCC-CCCceEEEeCCCCCccc----ccHHHHHHHhhcc--ceEEeecCC----C---CCCCCCCCCCCCh
Q 024228 30 PGTILNIWVPKKT-TKKHAVVLLHPFGFDGI----LTWQFQVLALAKT--YEVYVPDFL----F---FGSSVTDRPDRTA 95 (270)
Q Consensus 30 ~g~~l~~~~~~~~-~~~~~vv~~hG~~~~~~----~~~~~~~~~l~~~--~~v~~~d~~----g---~G~s~~~~~~~~~ 95 (270)
|..-+.+|.+... .+..++|++-|+|.-++ ..|+ .+.|+.. .-|+.+++| | .+..+..++...+
T Consensus 119 DCLYlNVW~P~~~p~n~tVlVWiyGGGF~sGt~SLdvYd--Gk~la~~envIvVs~NYRvG~FGFL~l~~~~eaPGNmGl 196 (601)
T KOG4389|consen 119 DCLYLNVWAPAADPYNLTVLVWIYGGGFYSGTPSLDVYD--GKFLAAVENVIVVSMNYRVGAFGFLYLPGHPEAPGNMGL 196 (601)
T ss_pred hceEEEEeccCCCCCCceEEEEEEcCccccCCcceeeec--cceeeeeccEEEEEeeeeeccceEEecCCCCCCCCccch
Confidence 5667788888543 34557778888764333 1222 2445444 667777776 1 1122222233222
Q ss_pred HH---HHHHHHHHHHHhC--CCceEEEEEchhHHHH-HHHHh-hCccccccEEEecccC
Q 024228 96 SF---QAECMAKGLRKLG--VEKCTLVGVSYGGMVG-FKMAE-MYPDLVESMVVTCSVM 147 (270)
Q Consensus 96 ~~---~~~~~~~~l~~~~--~~~~~l~G~S~Gg~~a-~~~a~-~~p~~v~~~i~~~~~~ 147 (270)
-+ ....+.+-|...| .+++.|+|.|.|+.-. +.+.+ .....++..|+-++..
T Consensus 197 ~DQqLAl~WV~~Ni~aFGGnp~~vTLFGESAGaASv~aHLlsP~S~glF~raIlQSGS~ 255 (601)
T KOG4389|consen 197 LDQQLALQWVQENIAAFGGNPSRVTLFGESAGAASVVAHLLSPGSRGLFHRAILQSGSL 255 (601)
T ss_pred HHHHHHHHHHHHhHHHhCCCcceEEEeccccchhhhhheecCCCchhhHHHHHhhcCCC
Confidence 22 2345555566665 4579999999997543 22221 1123466666655443
No 245
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=88.58 E-value=0.83 Score=37.77 Aligned_cols=44 Identities=23% Similarity=0.276 Sum_probs=33.3
Q ss_pred hCCCceEEEEEchhHHHHHHHHhhC-----ccccccEEEecccCCCCch
Q 024228 109 LGVEKCTLVGVSYGGMVGFKMAEMY-----PDLVESMVVTCSVMGLTES 152 (270)
Q Consensus 109 ~~~~~~~l~G~S~Gg~~a~~~a~~~-----p~~v~~~i~~~~~~~~~~~ 152 (270)
.|.+|+.|+|+|.|+.+........ -+.|..+++++++......
T Consensus 444 qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~k~~ 492 (633)
T KOG2385|consen 444 QGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPTKAK 492 (633)
T ss_pred cCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccCCHH
Confidence 4678999999999999887655422 2358999999988765543
No 246
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=84.09 E-value=9.6 Score=30.63 Aligned_cols=89 Identities=19% Similarity=0.128 Sum_probs=57.8
Q ss_pred CCceEEEeCCCCCccc------ccHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEE
Q 024228 44 KKHAVVLLHPFGFDGI------LTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLV 117 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~------~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~ 117 (270)
+...||++||-..++. ..|..++..+.++=-+-.+|.-..|..++ .++-+.-++.++... +-.++
T Consensus 170 ~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~G------leeDa~~lR~~a~~~---~~~lv 240 (396)
T COG1448 170 PEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADG------LEEDAYALRLFAEVG---PELLV 240 (396)
T ss_pred CCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccc------hHHHHHHHHHHHHhC---CcEEE
Confidence 4557999998665443 48999998888874455556544444332 344444455544432 33888
Q ss_pred EEchhHHHHHHHHhhCccccccEEEeccc
Q 024228 118 GVSYGGMVGFKMAEMYPDLVESMVVTCSV 146 (270)
Q Consensus 118 G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~ 146 (270)
..|+.=.+++ |.+||.++.+++..
T Consensus 241 a~S~SKnfgL-----YgERVGa~~vva~~ 264 (396)
T COG1448 241 ASSFSKNFGL-----YGERVGALSVVAED 264 (396)
T ss_pred Eehhhhhhhh-----hhhccceeEEEeCC
Confidence 8888776665 56889999988653
No 247
>PRK12467 peptide synthase; Provisional
Probab=83.61 E-value=7.1 Score=42.17 Aligned_cols=97 Identities=14% Similarity=-0.044 Sum_probs=66.6
Q ss_pred CceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhC-CCceEEEEEchhH
Q 024228 45 KHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLG-VEKCTLVGVSYGG 123 (270)
Q Consensus 45 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~l~G~S~Gg 123 (270)
.+.+++.|...+... .+..+...+.....++.+..++.-... ....+++.++....+.+.... ..+..+.|+|+||
T Consensus 3692 ~~~l~~~h~~~r~~~-~~~~l~~~l~~~~~~~~l~~~~~~~d~--~~~~~~~~~~~~y~~~~~~~~~~~p~~l~g~s~g~ 3768 (3956)
T PRK12467 3692 FPALFCRHEGLGTVF-DYEPLAVILEGDRHVLGLTCRHLLDDG--WQDTSLQAMAVQYADYILWQQAKGPYGLLGWSLGG 3768 (3956)
T ss_pred ccceeeechhhcchh-hhHHHHHHhCCCCcEEEEecccccccc--CCccchHHHHHHHHHHHHHhccCCCeeeeeeecch
Confidence 456999999998887 788888888777777877766442221 123456666666666666653 3578999999999
Q ss_pred HHHHHHHhhC---ccccccEEEec
Q 024228 124 MVGFKMAEMY---PDLVESMVVTC 144 (270)
Q Consensus 124 ~~a~~~a~~~---p~~v~~~i~~~ 144 (270)
.++..++... .+.+.-+.++.
T Consensus 3769 ~~a~~~~~~l~~~g~~~~~~~~~~ 3792 (3956)
T PRK12467 3769 TLARLVAELLEREGESEAFLGLFD 3792 (3956)
T ss_pred HHHHHHHHHHHHcCCceeEEEEEe
Confidence 9998877643 34455444443
No 248
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=83.34 E-value=16 Score=28.23 Aligned_cols=26 Identities=23% Similarity=0.335 Sum_probs=20.4
Q ss_pred HHhC-CCceEEEEEchhHHHHHHHHhh
Q 024228 107 RKLG-VEKCTLVGVSYGGMVGFKMAEM 132 (270)
Q Consensus 107 ~~~~-~~~~~l~G~S~Gg~~a~~~a~~ 132 (270)
+.+. .+++.++|+|-|+..|-.+|..
T Consensus 86 ~~~~~gd~I~lfGFSRGA~~AR~~a~~ 112 (277)
T PF09994_consen 86 KNYEPGDRIYLFGFSRGAYTARAFANM 112 (277)
T ss_pred hccCCcceEEEEecCccHHHHHHHHHH
Confidence 4443 4579999999999999888764
No 249
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=77.77 E-value=15 Score=28.33 Aligned_cols=82 Identities=17% Similarity=0.082 Sum_probs=45.5
Q ss_pred HHHhhcc-ceEEeecCCCCCCCC------CCCCCCChHHHHHHHHHHHHHhCC---CceEEEEEchhHHHHHHHHhh---
Q 024228 66 VLALAKT-YEVYVPDFLFFGSSV------TDRPDRTASFQAECMAKGLRKLGV---EKCTLVGVSYGGMVGFKMAEM--- 132 (270)
Q Consensus 66 ~~~l~~~-~~v~~~d~~g~G~s~------~~~~~~~~~~~~~~~~~~l~~~~~---~~~~l~G~S~Gg~~a~~~a~~--- 132 (270)
.+++... ..++++.|-.. -|- .......-..+.+.+.+.++.+.. .+++|.|.|+|++-+...-..
T Consensus 54 ~E~l~~GD~A~va~QYSyl-PSw~sfl~dr~~a~~a~~aL~~aV~~~~~~lP~~~RPkL~l~GeSLGa~g~~~af~~~~~ 132 (289)
T PF10081_consen 54 LEYLYGGDVAIVAMQYSYL-PSWLSFLVDRDAAREAARALFEAVYARWSTLPEDRRPKLYLYGESLGAYGGEAAFDGLDD 132 (289)
T ss_pred HHHHhCCCeEEEEeccccc-cchHHHhcccchHHHHHHHHHHHHHHHHHhCCcccCCeEEEeccCccccchhhhhccHHH
Confidence 4566655 78888776321 110 000001122233344444455532 379999999998776554332
Q ss_pred CccccccEEEecccCC
Q 024228 133 YPDLVESMVVTCSVMG 148 (270)
Q Consensus 133 ~p~~v~~~i~~~~~~~ 148 (270)
.-+++.+.++.+|+..
T Consensus 133 ~~~~vdGalw~GpP~~ 148 (289)
T PF10081_consen 133 LRDRVDGALWVGPPFF 148 (289)
T ss_pred hhhhcceEEEeCCCCC
Confidence 2356999999888654
No 250
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=77.76 E-value=3.4 Score=32.18 Aligned_cols=31 Identities=29% Similarity=0.382 Sum_probs=24.3
Q ss_pred HHHHHHHhCCCceEEEEEchhHHHHHHHHhh
Q 024228 102 MAKGLRKLGVEKCTLVGVSYGGMVGFKMAEM 132 (270)
Q Consensus 102 ~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~ 132 (270)
+.++++..+.++-.++|||+|-+.|+.++..
T Consensus 72 ~~~~l~~~Gi~p~~~~GhSlGE~aA~~~ag~ 102 (298)
T smart00827 72 LARLWRSWGVRPDAVVGHSLGEIAAAYVAGV 102 (298)
T ss_pred HHHHHHHcCCcccEEEecCHHHHHHHHHhCC
Confidence 3455677788899999999999888776643
No 251
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=77.59 E-value=5 Score=28.34 Aligned_cols=33 Identities=30% Similarity=0.299 Sum_probs=25.7
Q ss_pred HHHHHHHhCCCceEEEEEchhHHHHHHHHhhCc
Q 024228 102 MAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYP 134 (270)
Q Consensus 102 ~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p 134 (270)
+.+.+++.+...-.+.|-|.|+.++..++...+
T Consensus 16 vl~aL~e~gi~~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 16 VAKALRERGPLIDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCC
Confidence 444555557777789999999999999998754
No 252
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=77.16 E-value=2.2 Score=33.67 Aligned_cols=31 Identities=26% Similarity=0.407 Sum_probs=24.3
Q ss_pred HHHHHHHhCCCceEEEEEchhHHHHHHHHhh
Q 024228 102 MAKGLRKLGVEKCTLVGVSYGGMVGFKMAEM 132 (270)
Q Consensus 102 ~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~ 132 (270)
+.++++..+..+-.++|||+|=+.|+.++..
T Consensus 74 l~~~l~~~Gi~P~~v~GhSlGE~aA~~aaG~ 104 (318)
T PF00698_consen 74 LARLLRSWGIKPDAVIGHSLGEYAALVAAGA 104 (318)
T ss_dssp HHHHHHHTTHCESEEEESTTHHHHHHHHTTS
T ss_pred hhhhhcccccccceeeccchhhHHHHHHCCc
Confidence 4456677788899999999998888766543
No 253
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=76.57 E-value=3.9 Score=31.85 Aligned_cols=31 Identities=19% Similarity=0.154 Sum_probs=24.1
Q ss_pred HHHHHHHhCCCceEEEEEchhHHHHHHHHhh
Q 024228 102 MAKGLRKLGVEKCTLVGVSYGGMVGFKMAEM 132 (270)
Q Consensus 102 ~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~ 132 (270)
+.+.++..+.++..++|||+|=+.|+.++..
T Consensus 66 l~~~l~~~g~~P~~v~GhS~GE~aAa~~aG~ 96 (295)
T TIGR03131 66 AWRALLALLPRPSAVAGYSVGEYAAAVVAGV 96 (295)
T ss_pred HHHHHHhcCCCCcEEeecCHHHHHHHHHhCC
Confidence 3455667788899999999999888876643
No 254
>PRK10279 hypothetical protein; Provisional
Probab=76.28 E-value=4.7 Score=31.54 Aligned_cols=33 Identities=30% Similarity=0.409 Sum_probs=26.8
Q ss_pred HHHHHHHhCCCceEEEEEchhHHHHHHHHhhCc
Q 024228 102 MAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYP 134 (270)
Q Consensus 102 ~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p 134 (270)
+.+.+++.+...-.++|-|+|+.++..+|....
T Consensus 23 VL~aL~E~gi~~d~i~GtS~GAlvga~yA~g~~ 55 (300)
T PRK10279 23 VINALKKVGIEIDIVAGCSIGSLVGAAYACDRL 55 (300)
T ss_pred HHHHHHHcCCCcCEEEEEcHHHHHHHHHHcCCh
Confidence 455666678888889999999999999997653
No 255
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=76.09 E-value=5.2 Score=31.44 Aligned_cols=62 Identities=19% Similarity=0.156 Sum_probs=40.0
Q ss_pred cHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhC
Q 024228 61 TWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMY 133 (270)
Q Consensus 61 ~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 133 (270)
.|+++++.|...-.-++++= |. .--...--+.+.+++.++..-.++|-|+|+.++..+|...
T Consensus 3 d~~rl~r~l~~~~~gLvL~G---GG--------~RG~ahiGvL~aLee~gi~~d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 3 DFSRLARVLTGNSIALVLGG---GG--------ARGCAHIGVIKALEEAGIPVDMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred hHHHHHHHhcCCCEEEEECC---hH--------HHHHHHHHHHHHHHHcCCCCCEEEEECHHHHHHHHHHcCC
Confidence 67778888877633333331 10 0111223455666666877778899999999999999864
No 256
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=75.34 E-value=3.4 Score=27.49 Aligned_cols=20 Identities=20% Similarity=0.328 Sum_probs=16.8
Q ss_pred CCCCceEEEeCCCCCcccccH
Q 024228 42 TTKKHAVVLLHPFGFDGILTW 62 (270)
Q Consensus 42 ~~~~~~vv~~hG~~~~~~~~~ 62 (270)
.+++|.|+-+||+.|... .|
T Consensus 49 ~p~KpLVlSfHG~tGtGK-n~ 68 (127)
T PF06309_consen 49 NPRKPLVLSFHGWTGTGK-NF 68 (127)
T ss_pred CCCCCEEEEeecCCCCcH-HH
Confidence 356899999999999988 55
No 257
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=75.00 E-value=12 Score=27.31 Aligned_cols=63 Identities=19% Similarity=0.205 Sum_probs=44.7
Q ss_pred ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEEch----hHHHHHHHHhhCc-cccccEEEe
Q 024228 73 YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVSY----GGMVGFKMAEMYP-DLVESMVVT 143 (270)
Q Consensus 73 ~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~G~S~----Gg~~a~~~a~~~p-~~v~~~i~~ 143 (270)
-+|+..+.+.. ..++.+.+++.+.++++..+ ..++|+|+|. |..++.++|.+.. ..+..++-+
T Consensus 78 d~V~~~~~~~~-------~~~~~e~~a~al~~~i~~~~-p~lVL~~~t~~~~~grdlaprlAarLga~lvsdv~~l 145 (202)
T cd01714 78 DRAILVSDRAF-------AGADTLATAKALAAAIKKIG-VDLILTGKQSIDGDTGQVGPLLAELLGWPQITYVSKI 145 (202)
T ss_pred CEEEEEecccc-------cCCChHHHHHHHHHHHHHhC-CCEEEEcCCcccCCcCcHHHHHHHHhCCCccceEEEE
Confidence 46777665422 33678888999999998877 5799999998 7888888888752 234444443
No 258
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=73.25 E-value=7 Score=28.14 Aligned_cols=32 Identities=28% Similarity=0.358 Sum_probs=24.3
Q ss_pred HHHHHHHhCCCceEEEEEchhHHHHHHHHhhC
Q 024228 102 MAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMY 133 (270)
Q Consensus 102 ~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 133 (270)
+.+.+++.+...-.++|-|.||.+|..++...
T Consensus 17 vl~~L~e~~~~~d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 17 ALKALEEAGILKKRVAGTSAGAITAALLALGY 48 (194)
T ss_pred HHHHHHHcCCCcceEEEECHHHHHHHHHHcCC
Confidence 34444555666678899999999999998764
No 259
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=72.76 E-value=6.2 Score=31.00 Aligned_cols=33 Identities=24% Similarity=0.279 Sum_probs=27.4
Q ss_pred HHHHHHHHhCCCceEEEEEchhHHHHHHHHhhC
Q 024228 101 CMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMY 133 (270)
Q Consensus 101 ~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 133 (270)
-+.+.|++.+...-++.|-|+|+.++..+|...
T Consensus 28 GVl~aL~e~gi~~~~iaGtS~GAiva~l~A~g~ 60 (306)
T COG1752 28 GVLKALEEAGIPIDVIAGTSAGAIVAALYAAGM 60 (306)
T ss_pred HHHHHHHHcCCCccEEEecCHHHHHHHHHHcCC
Confidence 355667777888889999999999999999854
No 260
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=72.09 E-value=8.4 Score=28.62 Aligned_cols=31 Identities=29% Similarity=0.408 Sum_probs=23.6
Q ss_pred HHHHHHhCCCceEEEEEchhHHHHHHHHhhC
Q 024228 103 AKGLRKLGVEKCTLVGVSYGGMVGFKMAEMY 133 (270)
Q Consensus 103 ~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 133 (270)
.+.+++.+.+.-.++|-|.|+.++..+|...
T Consensus 19 L~aL~e~gi~~~~i~GtSaGAi~aa~~a~g~ 49 (221)
T cd07210 19 LAALLEMGLEPSAISGTSAGALVGGLFASGI 49 (221)
T ss_pred HHHHHHcCCCceEEEEeCHHHHHHHHHHcCC
Confidence 3444445666668999999999999998754
No 261
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=71.73 E-value=5.6 Score=30.82 Aligned_cols=31 Identities=19% Similarity=0.172 Sum_probs=23.4
Q ss_pred HHHHHHhC-CCceEEEEEchhHHHHHHHHhhC
Q 024228 103 AKGLRKLG-VEKCTLVGVSYGGMVGFKMAEMY 133 (270)
Q Consensus 103 ~~~l~~~~-~~~~~l~G~S~Gg~~a~~~a~~~ 133 (270)
...++..+ ..+-.++|||+|=+.|+.++...
T Consensus 73 ~~~l~~~g~i~p~~v~GhS~GE~aAa~~aG~l 104 (290)
T TIGR00128 73 YLKLKEQGGLKPDFAAGHSLGEYSALVAAGAL 104 (290)
T ss_pred HHHHHHcCCCCCCEEeecCHHHHHHHHHhCCC
Confidence 34455566 88999999999998888776543
No 262
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=71.55 E-value=7.5 Score=29.90 Aligned_cols=33 Identities=24% Similarity=0.279 Sum_probs=25.9
Q ss_pred HHHHHHHHhCCCceEEEEEchhHHHHHHHHhhC
Q 024228 101 CMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMY 133 (270)
Q Consensus 101 ~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 133 (270)
-+.+.+++.++..-.+.|-|+|+.++..+|...
T Consensus 27 GVL~aLeE~gi~~d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 27 GILQALEEAGIPIDAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred HHHHHHHHcCCCccEEEEECHHHHHHHHHHcCC
Confidence 345556666777678899999999999999863
No 263
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=68.00 E-value=11 Score=26.74 Aligned_cols=32 Identities=28% Similarity=0.334 Sum_probs=23.9
Q ss_pred HHHHHHhCCCceEEEEEchhHHHHHHHHhhCc
Q 024228 103 AKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYP 134 (270)
Q Consensus 103 ~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p 134 (270)
.+.+++.+...-.+.|-|.|+.++..++...+
T Consensus 19 l~~L~e~g~~~d~i~GtSaGAi~aa~~a~g~~ 50 (175)
T cd07228 19 LRALEEEGIEIDIIAGSSIGALVGALYAAGHL 50 (175)
T ss_pred HHHHHHCCCCeeEEEEeCHHHHHHHHHHcCCC
Confidence 33444556666678999999999999988754
No 264
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=67.10 E-value=11 Score=27.77 Aligned_cols=33 Identities=30% Similarity=0.418 Sum_probs=25.5
Q ss_pred HHHHHHHhCCCceEEEEEchhHHHHHHHHhhCc
Q 024228 102 MAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYP 134 (270)
Q Consensus 102 ~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p 134 (270)
+.+.+.+.+...-.+.|.|.|+.++..++...+
T Consensus 16 vl~aL~e~g~~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 16 VLKALAEAGIEPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCc
Confidence 344455556666688999999999999998764
No 265
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=67.08 E-value=5.7 Score=32.80 Aligned_cols=35 Identities=17% Similarity=0.173 Sum_probs=26.0
Q ss_pred HHHHHHhCCCceEEEEEchhHHHHHHHHhhCcccc
Q 024228 103 AKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLV 137 (270)
Q Consensus 103 ~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v 137 (270)
...+...+..+-++.|-|.|+.+|..++...++.+
T Consensus 92 LkaL~E~gl~p~vIsGTSaGAivAal~as~~~eel 126 (421)
T cd07230 92 LKALFEANLLPRIISGSSAGSIVAAILCTHTDEEI 126 (421)
T ss_pred HHHHHHcCCCCCEEEEECHHHHHHHHHHcCCHHHH
Confidence 33444445666789999999999999998766554
No 266
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=64.24 E-value=5.4 Score=34.08 Aligned_cols=44 Identities=9% Similarity=0.149 Sum_probs=31.5
Q ss_pred eeeeEEEcCCCccCCHHHHHH-HHHHhc------CCceEEEecCCCcceee
Q 024228 202 EKIHLLWGENDKIFDMQVARN-LKEQVG------QNATMESIEKAGHLVNL 245 (270)
Q Consensus 202 ~P~l~i~g~~D~~~~~~~~~~-~~~~~~------~~~~~~~~~~~gH~~~~ 245 (270)
.|.+++||..|.++|.....+ +..... +..++++++++-|+..+
T Consensus 556 KPaIiVhGR~DaLlPvnh~Sr~Y~~ln~~~eG~~s~lrYyeV~naqHfDaf 606 (690)
T PF10605_consen 556 KPAIIVHGRSDALLPVNHTSRPYLGLNRQVEGRASRLRYYEVTNAQHFDAF 606 (690)
T ss_pred CceEEEecccceecccCCCchHHHHHhhhhcccccceeEEEecCCeechhh
Confidence 899999999999998754322 222221 24688999998888643
No 267
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=63.90 E-value=6 Score=32.51 Aligned_cols=39 Identities=15% Similarity=0.206 Sum_probs=28.3
Q ss_pred HHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccE
Q 024228 102 MAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESM 140 (270)
Q Consensus 102 ~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~ 140 (270)
+...+...+..+-++.|-|.|+.+|..++...++.+..+
T Consensus 85 VlkaL~e~gllp~iI~GtSAGAivaalla~~t~~el~~~ 123 (407)
T cd07232 85 VVKALLDADLLPNVISGTSGGSLVAALLCTRTDEELKQL 123 (407)
T ss_pred HHHHHHhCCCCCCEEEEECHHHHHHHHHHcCCHHHHHHH
Confidence 333444446667789999999999999998766555444
No 268
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=62.54 E-value=6.8 Score=31.84 Aligned_cols=39 Identities=13% Similarity=0.173 Sum_probs=28.2
Q ss_pred HHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccE
Q 024228 102 MAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESM 140 (270)
Q Consensus 102 ~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~ 140 (270)
+...+...+..+-++.|-|.|+.+|..+|...++.+..+
T Consensus 101 v~kaL~e~gl~p~~i~GtS~Gaivaa~~a~~~~~e~~~~ 139 (391)
T cd07229 101 VVKALWLRGLLPRIITGTATGALIAALVGVHTDEELLRF 139 (391)
T ss_pred HHHHHHHcCCCCceEEEecHHHHHHHHHHcCCHHHHHHH
Confidence 334445556677789999999999999998655544443
No 269
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=62.46 E-value=18 Score=25.54 Aligned_cols=31 Identities=32% Similarity=0.424 Sum_probs=22.9
Q ss_pred HHHHHHhCCCceEEEEEchhHHHHHHHHhhC
Q 024228 103 AKGLRKLGVEKCTLVGVSYGGMVGFKMAEMY 133 (270)
Q Consensus 103 ~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 133 (270)
...+++.+...-.++|-|.|+.+|..++...
T Consensus 19 l~~L~~~~~~~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 19 LKALEEAGIPIDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred HHHHHHcCCCeeEEEEECHHHHHHHHHHcCC
Confidence 3344444555567899999999999998754
No 270
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=61.95 E-value=8.5 Score=30.27 Aligned_cols=34 Identities=18% Similarity=0.189 Sum_probs=24.9
Q ss_pred HHHHHHHhCCCceEEEEEchhHHHHHHHHhhCcc
Q 024228 102 MAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPD 135 (270)
Q Consensus 102 ~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~ 135 (270)
+.+.+...+..+-++.|-|.|+.+|..++...++
T Consensus 86 VlkaL~e~gl~p~~i~GsSaGAivaa~~~~~t~~ 119 (323)
T cd07231 86 VVRTLVEHQLLPRVIAGSSVGSIVCAIIATRTDE 119 (323)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCHH
Confidence 3344444566677899999999999999876443
No 271
>COG3933 Transcriptional antiterminator [Transcription]
Probab=61.13 E-value=75 Score=26.48 Aligned_cols=73 Identities=15% Similarity=0.111 Sum_probs=53.6
Q ss_pred CceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEEchhHH
Q 024228 45 KHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVSYGGM 124 (270)
Q Consensus 45 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~ 124 (270)
-..||+.||....+ .....+..|-..--+.++|+| -+.++.+..+.+.+.+++.+..+=.++=..||..
T Consensus 109 v~vIiiAHG~sTAS--SmaevanrLL~~~~~~aiDMP---------Ldvsp~~vle~l~e~~k~~~~~~GlllLVDMGSL 177 (470)
T COG3933 109 VKVIIIAHGYSTAS--SMAEVANRLLGEEIFIAIDMP---------LDVSPSDVLEKLKEYLKERDYRSGLLLLVDMGSL 177 (470)
T ss_pred eeEEEEecCcchHH--HHHHHHHHHhhccceeeecCC---------CcCCHHHHHHHHHHHHHhcCccCceEEEEecchH
Confidence 35788999987654 445566666666778899988 4567888888999999988877755666778876
Q ss_pred HHHH
Q 024228 125 VGFK 128 (270)
Q Consensus 125 ~a~~ 128 (270)
.+..
T Consensus 178 ~~f~ 181 (470)
T COG3933 178 TSFG 181 (470)
T ss_pred HHHH
Confidence 6554
No 272
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=60.94 E-value=0.34 Score=37.31 Aligned_cols=102 Identities=14% Similarity=0.072 Sum_probs=57.8
Q ss_pred CCceEEEeCCCCCcccccHHHHH-HHhhcc-ceEEeecCCCCCCCCCCCCCC----ChHHHHHHHHHHHHHhCCCceEEE
Q 024228 44 KKHAVVLLHPFGFDGILTWQFQV-LALAKT-YEVYVPDFLFFGSSVTDRPDR----TASFQAECMAKGLRKLGVEKCTLV 117 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~~~~~~~~-~~l~~~-~~v~~~d~~g~G~s~~~~~~~----~~~~~~~~~~~~l~~~~~~~~~l~ 117 (270)
.+...+..||...+.. ....+. ..+... ..++..|+++++.+....... +.......+..........++.++
T Consensus 87 ~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (299)
T COG1073 87 FGESGGDPRGLADSEG-YAEDFSAAVLLLLSEGVLDKDYRLLGASLGPRILAGLSLGGPSAGALLAWGPTRLDASRIVVW 165 (299)
T ss_pred ccccccccccccCccc-cccccchhheeeeccccccHHHHHHhhhcCcceEEEEEeeccchHHHhhcchhHHHhhcccce
Confidence 3456777888755444 333332 333333 899999999999887544221 111112222222212345689999
Q ss_pred EEchhHHHHHHHHhh----CccccccEEEeccc
Q 024228 118 GVSYGGMVGFKMAEM----YPDLVESMVVTCSV 146 (270)
Q Consensus 118 G~S~Gg~~a~~~a~~----~p~~v~~~i~~~~~ 146 (270)
|.|+||..++..... .++.+..++.-++.
T Consensus 166 g~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (299)
T COG1073 166 GESLGGALALLLLGANPELARELIDYLITPGGF 198 (299)
T ss_pred eeccCceeeccccccchHHHHhhhhhhccCCCC
Confidence 999999998886553 23344444444433
No 273
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=60.13 E-value=18 Score=27.69 Aligned_cols=34 Identities=15% Similarity=0.171 Sum_probs=24.2
Q ss_pred HHHHHHHhCCC-ceEEEEEchhHHHHHHHHhhCcc
Q 024228 102 MAKGLRKLGVE-KCTLVGVSYGGMVGFKMAEMYPD 135 (270)
Q Consensus 102 ~~~~l~~~~~~-~~~l~G~S~Gg~~a~~~a~~~p~ 135 (270)
+.+.+.+.+.. -=.++|.|.|+.++..++...+.
T Consensus 16 vl~al~e~~~~~fd~i~GtSaGAi~a~~~~~g~~~ 50 (266)
T cd07208 16 VLDAFLEAGIRPFDLVIGVSAGALNAASYLSGQRG 50 (266)
T ss_pred HHHHHHHcCCCCCCEEEEECHHHHhHHHHHhCCcc
Confidence 33344444555 44789999999999999887654
No 274
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=59.36 E-value=1e+02 Score=25.48 Aligned_cols=95 Identities=15% Similarity=0.070 Sum_probs=57.9
Q ss_pred eEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCC------------------------hHHHHHH
Q 024228 47 AVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRT------------------------ASFQAEC 101 (270)
Q Consensus 47 ~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~------------------------~~~~~~~ 101 (270)
+|+++ |...++...+..+.+.+.+. ..++.+|.--.|..... .+.+ .+.+.+.
T Consensus 3 tI~ii-gT~DTK~~E~~yl~~~i~~~G~~v~~iDvg~~~~~~~~-~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~g 80 (403)
T PF06792_consen 3 TIAII-GTLDTKGEELLYLRDQIEAQGVEVLLIDVGTLGEPSFP-PDISREEVARAAGDSIEAVRSSGDRGEAIEAMARG 80 (403)
T ss_pred EEEEE-EccCCCHHHHHHHHHHHHHCCCcEEEEEcCCCCCCCCC-CCcCHHHHHHhcCCChHHhhccCCHHHHHHHHHHH
Confidence 33433 55555554777777778777 99999997544433322 1111 1122333
Q ss_pred HHHHHHHhC----CCceEEEEEchhHHHHHHHHhhCccccccEEEe
Q 024228 102 MAKGLRKLG----VEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVT 143 (270)
Q Consensus 102 ~~~~l~~~~----~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~ 143 (270)
+..++..+. +.-++-+|-|.|..++..+....|--+-++++.
T Consensus 81 a~~~v~~l~~~g~i~Gvi~~GGs~GT~lat~aMr~LPiG~PKlmVS 126 (403)
T PF06792_consen 81 AARFVSDLYDEGKIDGVIGIGGSGGTALATAAMRALPIGFPKLMVS 126 (403)
T ss_pred HHHHHHHHHhcCCccEEEEecCCccHHHHHHHHHhCCCCCCeEEEE
Confidence 344444442 345777899999999999999888666666553
No 275
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=59.23 E-value=13 Score=31.75 Aligned_cols=31 Identities=13% Similarity=0.171 Sum_probs=24.7
Q ss_pred HHHH-HHhCCCceEEEEEchhHHHHHHHHhhC
Q 024228 103 AKGL-RKLGVEKCTLVGVSYGGMVGFKMAEMY 133 (270)
Q Consensus 103 ~~~l-~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 133 (270)
.+++ +..++++-.++|||+|=+.|+..|.-.
T Consensus 255 a~ll~~~~GI~Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 255 TQLLCDEFAIKPDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred HHHHHHhcCCCCCEEeecCHHHHHHHHHhCCC
Confidence 3445 577899999999999998888877654
No 276
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=57.77 E-value=41 Score=26.63 Aligned_cols=48 Identities=19% Similarity=0.209 Sum_probs=35.5
Q ss_pred HHHHHHHHHHhCCCceEEEEEchh--HHHHHHHHhhCccccccEEEeccc
Q 024228 99 AECMAKGLRKLGVEKCTLVGVSYG--GMVGFKMAEMYPDLVESMVVTCSV 146 (270)
Q Consensus 99 ~~~~~~~l~~~~~~~~~l~G~S~G--g~~a~~~a~~~p~~v~~~i~~~~~ 146 (270)
...+..++..+...+++|+|-|-= =-+=..++.++|++|.++.+=+..
T Consensus 265 ~~~l~nil~~~p~~kfvLVGDsGE~DpeIYae~v~~fP~RIl~I~IRdvs 314 (373)
T COG4850 265 GQSLRNILRRYPDRKFVLVGDSGEHDPEIYAEMVRCFPNRILGIYIRDVS 314 (373)
T ss_pred ccHHHHHHHhCCCceEEEecCCCCcCHHHHHHHHHhCccceeeEeeeecc
Confidence 345666788888889999999843 244455778899999998775544
No 277
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=57.21 E-value=23 Score=26.63 Aligned_cols=33 Identities=24% Similarity=0.193 Sum_probs=23.8
Q ss_pred HHHHHHHhCCC--ceEEEEEchhHHHHHHHHhhCc
Q 024228 102 MAKGLRKLGVE--KCTLVGVSYGGMVGFKMAEMYP 134 (270)
Q Consensus 102 ~~~~l~~~~~~--~~~l~G~S~Gg~~a~~~a~~~p 134 (270)
+.+.+.+.+.. .-.+.|-|.|+.++..++...+
T Consensus 17 Vl~~L~e~gi~~~~~~i~G~SAGAl~aa~~asg~~ 51 (233)
T cd07224 17 VLSLLIEAGVINETTPLAGASAGSLAAACSASGLS 51 (233)
T ss_pred HHHHHHHcCCCCCCCEEEEEcHHHHHHHHHHcCCC
Confidence 33444444554 3479999999999999998754
No 278
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=56.72 E-value=1e+02 Score=24.64 Aligned_cols=90 Identities=12% Similarity=-0.069 Sum_probs=49.4
Q ss_pred CCCceEEEeCCCCCccc----ccHHHHHHHhhcc--ceEEeecCCCCCCCCCCC------------CC----CChHHHH-
Q 024228 43 TKKHAVVLLHPFGFDGI----LTWQFQVLALAKT--YEVYVPDFLFFGSSVTDR------------PD----RTASFQA- 99 (270)
Q Consensus 43 ~~~~~vv~~hG~~~~~~----~~~~~~~~~l~~~--~~v~~~d~~g~G~s~~~~------------~~----~~~~~~~- 99 (270)
..+..|+|+-|....-. .....+...|... ..++++=.+|.|.-.-.. .. ..+..-+
T Consensus 29 s~k~lV~CfDGT~nrfg~qp~TNVv~Ly~sl~r~d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI~ 108 (423)
T COG3673 29 SMKRLVFCFDGTWNRFGAQPPTNVVLLYASLQRADGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNIR 108 (423)
T ss_pred CcceEEEEecCchhhcCCCCcchHHHHHHHHhcCCCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHHH
Confidence 34667888887432211 1334456667663 777777777776542110 00 0111111
Q ss_pred HHHHHHHHHhC-CCceEEEEEchhHHHHHHHHhh
Q 024228 100 ECMAKGLRKLG-VEKCTLVGVSYGGMVGFKMAEM 132 (270)
Q Consensus 100 ~~~~~~l~~~~-~~~~~l~G~S~Gg~~a~~~a~~ 132 (270)
....-++.++. .+.|+++|+|-|++.|--+|.-
T Consensus 109 ~AYrFL~~~yepGD~Iy~FGFSRGAf~aRVlagm 142 (423)
T COG3673 109 EAYRFLIFNYEPGDEIYAFGFSRGAFSARVLAGM 142 (423)
T ss_pred HHHHHHHHhcCCCCeEEEeeccchhHHHHHHHHH
Confidence 11222333333 4589999999999998777654
No 279
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=52.77 E-value=24 Score=27.62 Aligned_cols=32 Identities=16% Similarity=0.167 Sum_probs=23.4
Q ss_pred HHHhCCCceEEEEEchhHHHHHHHHhhCcccc
Q 024228 106 LRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLV 137 (270)
Q Consensus 106 l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v 137 (270)
+...+..+-++.|.|.|+.+|..++....+.+
T Consensus 91 L~e~~l~~~~i~GtSaGAi~aa~~~~~~~~El 122 (298)
T cd07206 91 LWEQDLLPRVISGSSAGAIVAALLGTHTDEEL 122 (298)
T ss_pred HHHcCCCCCEEEEEcHHHHHHHHHHcCCcHHH
Confidence 33345556679999999999999987654433
No 280
>PF03610 EIIA-man: PTS system fructose IIA component; InterPro: IPR004701 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) [, ] is a major carbohydrate transport system in bacteria. The PTS catalyses the phosphorylation of incoming sugar substrates and coupled with translocation across the cell membrane, makes the PTS a link between the uptake and metabolism of sugars. The general mechanism of the PTS is the following: a phosphoryl group from phosphoenolpyruvate (PEP) is transferred via a signal transduction pathway, to enzyme I (EI) which in turn transfers it to a phosphoryl carrier, the histidine protein (HPr). Phospho-HPr then transfers the phosphoryl group to a sugar-specific permease, a membrane-bound complex known as enzyme 2 (EII), which transports the sugar to the cell. EII consists of at least three structurally distinct domains IIA, IIB and IIC []. These can either be fused together in a single polypeptide chain or exist as two or three interactive chains, formerly called enzymes II (EII) and III (EIII). The first domain (IIA or EIIA) carries the first permease-specific phosphorylation site, a histidine which is phosphorylated by phospho-HPr. The second domain (IIB or EIIB) is phosphorylated by phospho-IIA on a cysteinyl or histidyl residue, depending on the sugar transported. Finally, the phosphoryl group is transferred from the IIB domain to the sugar substrate concomitantly with the sugar uptake processed by the IIC domain. This third domain (IIC or EIIC) forms the translocation channel and the specific substrate-binding site. An additional transmembrane domain IID, homologous to IIC, can be found in some PTSs, e.g. for mannose [, , , ]. The Man family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of Escherichia coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for IIA and IIB components.; GO: 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016021 integral to membrane; PDB: 3GDW_B 2JZN_A 1VSQ_A 2JZO_B 1VRC_A 1PDO_A 3GX1_A 3B48_B 3BED_B 3IPR_C ....
Probab=52.20 E-value=63 Score=20.97 Aligned_cols=74 Identities=12% Similarity=0.064 Sum_probs=48.2
Q ss_pred eEEEeCCCCCcccccHHHHHHHhhcc--ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhC-CCceEEEEEchhH
Q 024228 47 AVVLLHPFGFDGILTWQFQVLALAKT--YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLG-VEKCTLVGVSYGG 123 (270)
Q Consensus 47 ~vv~~hG~~~~~~~~~~~~~~~l~~~--~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~l~G~S~Gg 123 (270)
.||..|| . -+. .....++.+... -.+.++++. .+.+.+++.+.+.+.++.++ .+.+.++.-=+||
T Consensus 2 iii~sHG-~-~A~-g~~~~~~~i~G~~~~~i~~~~~~---------~~~~~~~~~~~l~~~i~~~~~~~~vlil~Dl~gg 69 (116)
T PF03610_consen 2 IIIASHG-S-LAE-GLLESAEMILGEDQDNIEAVDLY---------PDESIEDFEEKLEEAIEELDEGDGVLILTDLGGG 69 (116)
T ss_dssp EEEEEET-T-HHH-HHHHHHHHHHTSTCSSEEEEEET---------TTSCHHHHHHHHHHHHHHCCTTSEEEEEESSTTS
T ss_pred EEEEECc-H-HHH-HHHHHHHHHcCCCcccEEEEECc---------CCCCHHHHHHHHHHHHHhccCCCcEEEEeeCCCC
Confidence 4788899 2 223 445555555444 367777764 23578888999999998886 4567777777777
Q ss_pred HHHHHHHhh
Q 024228 124 MVGFKMAEM 132 (270)
Q Consensus 124 ~~a~~~a~~ 132 (270)
.....++..
T Consensus 70 sp~n~a~~~ 78 (116)
T PF03610_consen 70 SPFNEAARL 78 (116)
T ss_dssp HHHHHHHHH
T ss_pred ccchHHHHH
Confidence 655544443
No 281
>PRK06490 glutamine amidotransferase; Provisional
Probab=52.16 E-value=93 Score=23.53 Aligned_cols=35 Identities=9% Similarity=-0.059 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHH
Q 024228 96 SFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMA 130 (270)
Q Consensus 96 ~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a 130 (270)
..+...+.++++..-..++=++|.|+|..+...+.
T Consensus 69 ~~wi~~~~~~i~~~~~~~~PvLGIC~G~Qlla~al 103 (239)
T PRK06490 69 DDFIRREIDWISVPLKENKPFLGICLGAQMLARHL 103 (239)
T ss_pred chHHHHHHHHHHHHHHCCCCEEEECHhHHHHHHHc
Confidence 34555666666654334567899999998877653
No 282
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=49.88 E-value=79 Score=22.17 Aligned_cols=48 Identities=17% Similarity=0.114 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHh--CCCceEEEEEchhHHHHHHHHhhCccccccEEEecc
Q 024228 98 QAECMAKGLRKL--GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCS 145 (270)
Q Consensus 98 ~~~~~~~~l~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~ 145 (270)
..+.+.++++.+ ..++++++|-|..|..-+.++...++.|..++=.+|
T Consensus 53 ~~~~l~~~L~~~~~~gk~I~~yGA~~kg~tlln~~g~~~~~I~~vvD~np 102 (160)
T PF08484_consen 53 SKAELREFLEKLKAEGKRIAGYGAGAKGNTLLNYFGLDNDLIDYVVDDNP 102 (160)
T ss_dssp HHHHHHHHHHHHHHTT--EEEE---SHHHHHHHHHT--TTTS--EEES-G
T ss_pred HHHHHHHHHHHHHHcCCEEEEECcchHHHHHHHHhCCCcceeEEEEeCCh
Confidence 344455555444 346799999999999888888776666776665443
No 283
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=49.03 E-value=1e+02 Score=22.44 Aligned_cols=70 Identities=17% Similarity=0.153 Sum_probs=43.8
Q ss_pred HHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCcc--ccccEEE
Q 024228 66 VLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPD--LVESMVV 142 (270)
Q Consensus 66 ~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~--~v~~~i~ 142 (270)
.+.+.++ +.++.+|-+|... ......+.+..+++......++++=-+..+.-.+..+..+-+ .+.++|+
T Consensus 76 l~~~~~~~~D~vlIDT~Gr~~--------~d~~~~~el~~~~~~~~~~~~~LVlsa~~~~~~~~~~~~~~~~~~~~~lIl 147 (196)
T PF00448_consen 76 LEKFRKKGYDLVLIDTAGRSP--------RDEELLEELKKLLEALNPDEVHLVLSATMGQEDLEQALAFYEAFGIDGLIL 147 (196)
T ss_dssp HHHHHHTTSSEEEEEE-SSSS--------THHHHHHHHHHHHHHHSSSEEEEEEEGGGGGHHHHHHHHHHHHSSTCEEEE
T ss_pred HHHHhhcCCCEEEEecCCcch--------hhHHHHHHHHHHhhhcCCccceEEEecccChHHHHHHHHHhhcccCceEEE
Confidence 3444444 9999999987542 235567778888888876677776665555555544444322 3678776
Q ss_pred e
Q 024228 143 T 143 (270)
Q Consensus 143 ~ 143 (270)
-
T Consensus 148 T 148 (196)
T PF00448_consen 148 T 148 (196)
T ss_dssp E
T ss_pred E
Confidence 4
No 284
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=48.84 E-value=1e+02 Score=22.30 Aligned_cols=60 Identities=20% Similarity=0.098 Sum_probs=36.1
Q ss_pred CCCceEEEeCCCCCcccccH-HHHHHHhhcc-ceEEeecCCC--CCCCCCCCCCCChHHHHHHHHH
Q 024228 43 TKKHAVVLLHPFGFDGILTW-QFQVLALAKT-YEVYVPDFLF--FGSSVTDRPDRTASFQAECMAK 104 (270)
Q Consensus 43 ~~~~~vv~~hG~~~~~~~~~-~~~~~~l~~~-~~v~~~d~~g--~G~s~~~~~~~~~~~~~~~~~~ 104 (270)
..++.+|++.|..++..... ..+.+.|.+. ++++.+|--. ||.+.. ..++.++-.+.+..
T Consensus 20 ~~~~~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LDGDnvR~gL~~d--LgFs~edR~eniRR 83 (197)
T COG0529 20 GQKGAVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLDGDNVRHGLNRD--LGFSREDRIENIRR 83 (197)
T ss_pred CCCCeEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEecChhHhhcccCC--CCCChHHHHHHHHH
Confidence 34678999999998877222 2344566666 9999998321 333321 23455555555544
No 285
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=48.19 E-value=38 Score=25.63 Aligned_cols=20 Identities=20% Similarity=0.203 Sum_probs=17.8
Q ss_pred EEEEEchhHHHHHHHHhhCc
Q 024228 115 TLVGVSYGGMVGFKMAEMYP 134 (270)
Q Consensus 115 ~l~G~S~Gg~~a~~~a~~~p 134 (270)
.++|-|.|+.++..++...+
T Consensus 34 ~i~GtSAGAl~aa~~a~g~~ 53 (243)
T cd07204 34 RIAGASAGAIVAAVVLCGVS 53 (243)
T ss_pred EEEEEcHHHHHHHHHHhCCC
Confidence 88999999999999988754
No 286
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=46.51 E-value=44 Score=23.16 Aligned_cols=27 Identities=26% Similarity=0.268 Sum_probs=19.6
Q ss_pred HHHHHhCC--CceEEEEEchhHHHHHHHH
Q 024228 104 KGLRKLGV--EKCTLVGVSYGGMVGFKMA 130 (270)
Q Consensus 104 ~~l~~~~~--~~~~l~G~S~Gg~~a~~~a 130 (270)
+.+++.+. ..-.+.|.|.|+.++..++
T Consensus 18 ~~l~~~~~~~~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 18 SALAERGLLDCVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred HHHHHhCCccCCCEEEEEcHHHHHHHHHh
Confidence 33444344 4567889999999999988
No 287
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=44.83 E-value=76 Score=22.17 Aligned_cols=36 Identities=22% Similarity=0.077 Sum_probs=23.4
Q ss_pred CceEEEeCCCCCcccc-cHHHHHHHhhcc-ceEEeecC
Q 024228 45 KHAVVLLHPFGFDGIL-TWQFQVLALAKT-YEVYVPDF 80 (270)
Q Consensus 45 ~~~vv~~hG~~~~~~~-~~~~~~~~l~~~-~~v~~~d~ 80 (270)
++.+|++-|..++... .-..+.+.|.+. +.++.+|-
T Consensus 1 ~g~vIwltGlsGsGKtTlA~~L~~~L~~~g~~~~~LDg 38 (156)
T PF01583_consen 1 KGFVIWLTGLSGSGKTTLARALERRLFARGIKVYLLDG 38 (156)
T ss_dssp S-EEEEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEecC
Confidence 4689999999988771 222344556555 88999874
No 288
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=44.79 E-value=45 Score=25.29 Aligned_cols=20 Identities=20% Similarity=0.313 Sum_probs=17.4
Q ss_pred EEEEEchhHHHHHHHHhhCc
Q 024228 115 TLVGVSYGGMVGFKMAEMYP 134 (270)
Q Consensus 115 ~l~G~S~Gg~~a~~~a~~~p 134 (270)
.+.|-|.|+.+|..++...+
T Consensus 33 ~i~GtSAGAl~aa~~a~g~~ 52 (245)
T cd07218 33 KISGASAGALAACCLLCDLP 52 (245)
T ss_pred eEEEEcHHHHHHHHHHhCCc
Confidence 49999999999999988654
No 289
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=44.70 E-value=56 Score=24.63 Aligned_cols=87 Identities=14% Similarity=-0.059 Sum_probs=42.4
Q ss_pred CCceEEEeCCCCCc--ccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCC------CCCChHHHHH-----HHHHHHHHh
Q 024228 44 KKHAVVLLHPFGFD--GILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDR------PDRTASFQAE-----CMAKGLRKL 109 (270)
Q Consensus 44 ~~~~vv~~hG~~~~--~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~------~~~~~~~~~~-----~~~~~l~~~ 109 (270)
.++.|+|++-.... ...+...+.+.+.+. +.+..++...--...-.. ...+.-.+.+ .+.+.|+..
T Consensus 30 ~~~~v~fIPtAs~~~~~~~y~~~~~~af~~lG~~v~~l~~~~d~~~~l~~ad~I~v~GGnt~~l~~~l~~~gl~~~l~~~ 109 (233)
T PRK05282 30 GRRKAVFIPYAGVTQSWDDYTAKVAEALAPLGIEVTGIHRVADPVAAIENAEAIFVGGGNTFQLLKQLYERGLLAPIREA 109 (233)
T ss_pred CCCeEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEeccchhhHHHHhcCCEEEECCccHHHHHHHHHHCCcHHHHHHH
Confidence 36789999876533 331233345566665 777777654210000000 0111111111 122333322
Q ss_pred CCCceEEEEEchhHHHHHHHH
Q 024228 110 GVEKCTLVGVSYGGMVGFKMA 130 (270)
Q Consensus 110 ~~~~~~l~G~S~Gg~~a~~~a 130 (270)
-.+...++|.|.|+.++....
T Consensus 110 ~~~G~~~~G~SAGAii~~~~i 130 (233)
T PRK05282 110 VKNGTPYIGWSAGANVAGPTI 130 (233)
T ss_pred HHCCCEEEEECHHHHhhhccc
Confidence 123478999999998865543
No 290
>KOG2170 consensus ATPase of the AAA+ superfamily [General function prediction only]
Probab=43.96 E-value=21 Score=27.97 Aligned_cols=19 Identities=21% Similarity=0.345 Sum_probs=16.3
Q ss_pred CCCceEEEeCCCCCcccccH
Q 024228 43 TKKHAVVLLHPFGFDGILTW 62 (270)
Q Consensus 43 ~~~~~vv~~hG~~~~~~~~~ 62 (270)
+.+|.++=+||+.|+.. .|
T Consensus 107 p~KPLvLSfHG~tGTGK-N~ 125 (344)
T KOG2170|consen 107 PRKPLVLSFHGWTGTGK-NY 125 (344)
T ss_pred CCCCeEEEecCCCCCch-hH
Confidence 56899999999999988 54
No 291
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=43.83 E-value=49 Score=25.25 Aligned_cols=22 Identities=18% Similarity=0.250 Sum_probs=18.4
Q ss_pred ceEEEEEchhHHHHHHHHhhCc
Q 024228 113 KCTLVGVSYGGMVGFKMAEMYP 134 (270)
Q Consensus 113 ~~~l~G~S~Gg~~a~~~a~~~p 134 (270)
.-.++|-|.|+.++..++...+
T Consensus 33 ~~~i~GtSAGAl~aa~~asg~~ 54 (252)
T cd07221 33 ARMFFGASAGALHCVTFLSGLP 54 (252)
T ss_pred CCEEEEEcHHHHHHHHHHhCCC
Confidence 3468999999999999988654
No 292
>COG0279 GmhA Phosphoheptose isomerase [Carbohydrate transport and metabolism]
Probab=43.75 E-value=37 Score=23.92 Aligned_cols=71 Identities=21% Similarity=0.190 Sum_probs=43.5
Q ss_pred EEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCC------CCCChHHHHHHHHHHHHHhCCCceEEEEEchh
Q 024228 49 VLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDR------PDRTASFQAECMAKGLRKLGVEKCTLVGVSYG 122 (270)
Q Consensus 49 v~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~------~~~~~~~~~~~~~~~l~~~~~~~~~l~G~S~G 122 (270)
|++-|.|++.. .-+.++..|..+|..-.+-+|.--.|.... .++..+. -...-++.++..-=+|+|.|-.
T Consensus 44 vl~cGNGgSaa-dAqHfaael~gRf~~eR~~lpaIaLt~dsS~lTai~NDy~yd~---vFsRqveA~g~~GDvLigISTS 119 (176)
T COG0279 44 VLACGNGGSAA-DAQHFAAELTGRFEKERPSLPAIALSTDSSVLTAIANDYGYDE---VFSRQVEALGQPGDVLIGISTS 119 (176)
T ss_pred EEEECCCcchh-hHHHHHHHHhhHHHhcCCCCCeeEeecccHHHhhhhccccHHH---HHHHHHHhcCCCCCEEEEEeCC
Confidence 44557777777 777888888776666665555544432211 1233332 2445566777667788899987
Q ss_pred H
Q 024228 123 G 123 (270)
Q Consensus 123 g 123 (270)
|
T Consensus 120 G 120 (176)
T COG0279 120 G 120 (176)
T ss_pred C
Confidence 6
No 293
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=43.64 E-value=16 Score=25.52 Aligned_cols=43 Identities=21% Similarity=0.144 Sum_probs=23.9
Q ss_pred CCCCCCCCC---CCCChHHHHHHH----HHHHHHh----CCCceEEEEEchhHH
Q 024228 82 FFGSSVTDR---PDRTASFQAECM----AKGLRKL----GVEKCTLVGVSYGGM 124 (270)
Q Consensus 82 g~G~s~~~~---~~~~~~~~~~~~----~~~l~~~----~~~~~~l~G~S~Gg~ 124 (270)
|||...... ...+.+.++.-+ ..+.+.. ..+++.|+|.|++..
T Consensus 63 GHG~~~~~~~~l~g~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 63 GHGRDEFNNQTLAGYSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp --EESSTSSSEETTEEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred EeCCCcCCCceeCCCCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 677652111 346777777777 3444444 245899999999876
No 294
>KOG2872 consensus Uroporphyrinogen decarboxylase [Coenzyme transport and metabolism]
Probab=42.44 E-value=81 Score=24.60 Aligned_cols=68 Identities=15% Similarity=0.124 Sum_probs=42.9
Q ss_pred CceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCC----------C-----CCCCCCCCCCCChHHHHHHHHHHHHH
Q 024228 45 KHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFL----------F-----FGSSVTDRPDRTASFQAECMAKGLRK 108 (270)
Q Consensus 45 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~----------g-----~G~s~~~~~~~~~~~~~~~~~~~l~~ 108 (270)
-|-|+|.-|.++ ..+.|++. |.|+..|+- | .|.-++..-..+.+.+.+-+.+.++.
T Consensus 252 vPmi~fakG~g~--------~Le~l~~tG~DVvgLDWTvdp~ear~~~g~~VtlQGNlDP~~ly~s~e~it~~v~~mv~~ 323 (359)
T KOG2872|consen 252 VPMILFAKGSGG--------ALEELAQTGYDVVGLDWTVDPAEARRRVGNRVTLQGNLDPGVLYGSKEEITQLVKQMVKD 323 (359)
T ss_pred CceEEEEcCcch--------HHHHHHhcCCcEEeecccccHHHHHHhhCCceEEecCCChHHhcCCHHHHHHHHHHHHHH
Confidence 477888887443 34566666 999999973 1 12212111224666777888888998
Q ss_pred hCCCceEE-EEEc
Q 024228 109 LGVEKCTL-VGVS 120 (270)
Q Consensus 109 ~~~~~~~l-~G~S 120 (270)
.+.++.++ +||.
T Consensus 324 fG~~ryI~NLGHG 336 (359)
T KOG2872|consen 324 FGKSRYIANLGHG 336 (359)
T ss_pred hCccceEEecCCC
Confidence 88766554 6774
No 295
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=41.90 E-value=51 Score=25.09 Aligned_cols=22 Identities=14% Similarity=0.135 Sum_probs=18.2
Q ss_pred ceEEEEEchhHHHHHHHHhhCc
Q 024228 113 KCTLVGVSYGGMVGFKMAEMYP 134 (270)
Q Consensus 113 ~~~l~G~S~Gg~~a~~~a~~~p 134 (270)
.-.+.|-|.|+.++..++...+
T Consensus 37 ~~~i~G~SAGAl~aa~~a~g~~ 58 (249)
T cd07220 37 ARKIYGASAGALTATALVTGVC 58 (249)
T ss_pred CCeEEEEcHHHHHHHHHHcCCC
Confidence 3568899999999999988654
No 296
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=41.49 E-value=61 Score=25.67 Aligned_cols=19 Identities=21% Similarity=0.392 Sum_probs=16.3
Q ss_pred EEEEEchhHHHHHHHHhhC
Q 024228 115 TLVGVSYGGMVGFKMAEMY 133 (270)
Q Consensus 115 ~l~G~S~Gg~~a~~~a~~~ 133 (270)
.+.|-|+||.+|+.++...
T Consensus 35 ~i~GTStGgiIA~~la~g~ 53 (312)
T cd07212 35 WIAGTSTGGILALALLHGK 53 (312)
T ss_pred EEEeeChHHHHHHHHHcCC
Confidence 4779999999999998754
No 297
>PRK05665 amidotransferase; Provisional
Probab=41.21 E-value=63 Score=24.44 Aligned_cols=37 Identities=19% Similarity=0.106 Sum_probs=25.9
Q ss_pred ChHHHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHH
Q 024228 94 TASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMA 130 (270)
Q Consensus 94 ~~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a 130 (270)
....|...+.++|+..-...+=++|.|+|..+...++
T Consensus 72 ~~~pwi~~l~~~i~~~~~~~~PilGIC~GhQlla~Al 108 (240)
T PRK05665 72 GTDPWIQTLKTYLLKLYERGDKLLGVCFGHQLLALLL 108 (240)
T ss_pred ccchHHHHHHHHHHHHHhcCCCEEEEeHHHHHHHHHh
Confidence 3445677777777765434456899999998876654
No 298
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=40.14 E-value=36 Score=26.91 Aligned_cols=22 Identities=27% Similarity=0.327 Sum_probs=18.4
Q ss_pred CCCceEEEEEchhHHHHHHHHh
Q 024228 110 GVEKCTLVGVSYGGMVGFKMAE 131 (270)
Q Consensus 110 ~~~~~~l~G~S~Gg~~a~~~a~ 131 (270)
+.++.++.|||+|=+.|+.++.
T Consensus 83 ~~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 83 GVKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred CCCCceeecccHhHHHHHHHcc
Confidence 4678899999999988887765
No 299
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=39.93 E-value=59 Score=23.66 Aligned_cols=61 Identities=16% Similarity=-0.064 Sum_probs=31.6
Q ss_pred CCceEEEeCCCCCccc--ccHHHHHHHhhcc---ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHH
Q 024228 44 KKHAVVLLHPFGFDGI--LTWQFQVLALAKT---YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRK 108 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~--~~~~~~~~~l~~~---~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~ 108 (270)
..++++++||.....- ..-..+...|.+. ..++.+.--|||.... .....+.+.+.+++++
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~----~~~~~~~~~~~~f~~~ 208 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNP----ENRRDWYERILDFFDK 208 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSH----HHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCc----hhHHHHHHHHHHHHHH
Confidence 4789999999765433 1223455666665 4444444445543321 1222444555555543
No 300
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=39.61 E-value=1.4e+02 Score=22.27 Aligned_cols=36 Identities=19% Similarity=0.085 Sum_probs=23.4
Q ss_pred CceEEEeCCCCCcccc--cHHHHHHHhhcc-ceEEeecC
Q 024228 45 KHAVVLLHPFGFDGIL--TWQFQVLALAKT-YEVYVPDF 80 (270)
Q Consensus 45 ~~~vv~~hG~~~~~~~--~~~~~~~~l~~~-~~v~~~d~ 80 (270)
++.|.|++-.+.+... +-+.....|.+. ..+..+++
T Consensus 32 ~~~i~FIPtAs~~~~~~~Yv~k~~~~l~~lg~~v~~L~l 70 (224)
T COG3340 32 RKTIAFIPTASVDSEDDFYVEKVRNALAKLGLEVSELHL 70 (224)
T ss_pred CceEEEEecCccccchHHHHHHHHHHHHHcCCeeeeeec
Confidence 6789999887776651 223445667666 77766654
No 301
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=39.24 E-value=17 Score=27.77 Aligned_cols=14 Identities=21% Similarity=0.506 Sum_probs=11.7
Q ss_pred CCceEEEEEchhHH
Q 024228 111 VEKCTLVGVSYGGM 124 (270)
Q Consensus 111 ~~~~~l~G~S~Gg~ 124 (270)
...|+++|||+|..
T Consensus 234 i~~I~i~GhSl~~~ 247 (270)
T PF14253_consen 234 IDEIIIYGHSLGEV 247 (270)
T ss_pred CCEEEEEeCCCchh
Confidence 46799999999963
No 302
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=37.94 E-value=60 Score=25.21 Aligned_cols=81 Identities=16% Similarity=0.157 Sum_probs=40.8
Q ss_pred EEEeCCCCCcccccHHHHHHHhhcc-c-------eEEeecCCCCCCCCCCCCCCChHHHH--------HHHHHHHHHhCC
Q 024228 48 VVLLHPFGFDGILTWQFQVLALAKT-Y-------EVYVPDFLFFGSSVTDRPDRTASFQA--------ECMAKGLRKLGV 111 (270)
Q Consensus 48 vv~~hG~~~~~~~~~~~~~~~l~~~-~-------~v~~~d~~g~G~s~~~~~~~~~~~~~--------~~~~~~l~~~~~ 111 (270)
-|++.|.|...-..-+.+...+.+. . +++.+|..|-=..+.......-..++ .++.++++.+
T Consensus 27 ~iv~~GAGsAg~gia~ll~~~~~~~G~~~eeA~~~i~~vD~~Gll~~~r~~l~~~~~~~a~~~~~~~~~~L~e~i~~v-- 104 (279)
T cd05312 27 RILFLGAGSAGIGIADLIVSAMVREGLSEEEARKKIWLVDSKGLLTKDRKDLTPFKKPFARKDEEKEGKSLLEVVKAV-- 104 (279)
T ss_pred EEEEECcCHHHHHHHHHHHHHHHHcCCChhhccCeEEEEcCCCeEeCCCCcchHHHHHHHhhcCcccCCCHHHHHHhc--
Confidence 3444555544331333444443332 3 89999998853333221111111112 2455555544
Q ss_pred CceEEEEEch-hHHHHHHHH
Q 024228 112 EKCTLVGVSY-GGMVGFKMA 130 (270)
Q Consensus 112 ~~~~l~G~S~-Gg~~a~~~a 130 (270)
++-+|+|-|- ||.+.-.+.
T Consensus 105 ~ptvlIG~S~~~g~ft~evv 124 (279)
T cd05312 105 KPTVLIGLSGVGGAFTEEVV 124 (279)
T ss_pred CCCEEEEeCCCCCCCCHHHH
Confidence 4779999995 676554443
No 303
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=36.74 E-value=1.3e+02 Score=22.10 Aligned_cols=57 Identities=12% Similarity=-0.003 Sum_probs=31.3
Q ss_pred CceEEEeCCCCCccc--ccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHH
Q 024228 45 KHAVVLLHPFGFDGI--LTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRK 108 (270)
Q Consensus 45 ~~~vv~~hG~~~~~~--~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~ 108 (270)
+.+|+++||-....- ...+...+.|.+. .++-.-.++|-|.+- ..+...++.++|++
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i-------~~~~~~~~~~~l~~ 214 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEI-------SPEELRDLREFLEK 214 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS---------HHHHHHHHHHHHH
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCC-------CHHHHHHHHHHHhh
Confidence 568999999876654 1233455677766 556666666544432 23456666666654
No 304
>PRK05368 homoserine O-succinyltransferase; Provisional
Probab=36.61 E-value=58 Score=25.65 Aligned_cols=32 Identities=3% Similarity=-0.121 Sum_probs=22.2
Q ss_pred HHHHHHHHhCCCceEEEEEchhHHHHHHHHhh
Q 024228 101 CMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEM 132 (270)
Q Consensus 101 ~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~ 132 (270)
.+.++++.+.....-++|.|||+.+++.+.--
T Consensus 123 El~~i~~w~~~~~~s~LgICwGaQa~a~algG 154 (302)
T PRK05368 123 ELKEILDWAKTHVTSTLFICWAAQAALYHLYG 154 (302)
T ss_pred HHHHHHHHHHHcCCCEEEEcHHHHHHHHHcCC
Confidence 35555555443456789999999999877654
No 305
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=36.44 E-value=40 Score=19.80 Aligned_cols=25 Identities=16% Similarity=0.004 Sum_probs=14.3
Q ss_pred CceEEEeCCCCCcccccHHHHHHHhhcc
Q 024228 45 KHAVVLLHPFGFDGILTWQFQVLALAKT 72 (270)
Q Consensus 45 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~ 72 (270)
.|.++++||..-. .-+.++...++.
T Consensus 31 ~~~~~lvhGga~~---GaD~iA~~wA~~ 55 (71)
T PF10686_consen 31 HPDMVLVHGGAPK---GADRIAARWARE 55 (71)
T ss_pred CCCEEEEECCCCC---CHHHHHHHHHHH
Confidence 4678888986621 223555555544
No 306
>PRK04148 hypothetical protein; Provisional
Probab=36.24 E-value=85 Score=21.29 Aligned_cols=21 Identities=24% Similarity=0.245 Sum_probs=17.0
Q ss_pred CceEEEEEchhHHHHHHHHhh
Q 024228 112 EKCTLVGVSYGGMVGFKMAEM 132 (270)
Q Consensus 112 ~~~~l~G~S~Gg~~a~~~a~~ 132 (270)
.++..+|..+|..+|..++..
T Consensus 18 ~kileIG~GfG~~vA~~L~~~ 38 (134)
T PRK04148 18 KKIVELGIGFYFKVAKKLKES 38 (134)
T ss_pred CEEEEEEecCCHHHHHHHHHC
Confidence 569999999998888877754
No 307
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=36.17 E-value=59 Score=19.53 Aligned_cols=24 Identities=25% Similarity=0.423 Sum_probs=17.6
Q ss_pred CCCceEEEEEchhHHHHHHHHhhC
Q 024228 110 GVEKCTLVGVSYGGMVGFKMAEMY 133 (270)
Q Consensus 110 ~~~~~~l~G~S~Gg~~a~~~a~~~ 133 (270)
+.+++.++|-|.|=.+|.+.+..+
T Consensus 38 GpK~VLViGaStGyGLAsRIa~aF 61 (78)
T PF12242_consen 38 GPKKVLVIGASTGYGLASRIAAAF 61 (78)
T ss_dssp S-SEEEEES-SSHHHHHHHHHHHH
T ss_pred CCceEEEEecCCcccHHHHHHHHh
Confidence 346888999999988887777664
No 308
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=35.74 E-value=2.4e+02 Score=22.82 Aligned_cols=36 Identities=28% Similarity=0.381 Sum_probs=20.8
Q ss_pred hCCCceEEEEEchhHHHHHH-HHhhCccccccEEEec
Q 024228 109 LGVEKCTLVGVSYGGMVGFK-MAEMYPDLVESMVVTC 144 (270)
Q Consensus 109 ~~~~~~~l~G~S~Gg~~a~~-~a~~~p~~v~~~i~~~ 144 (270)
+-.+.=.++|-|.|+.++.. ..++.|+.-..++.+-
T Consensus 300 La~eeGll~G~SSGan~~aAl~~a~~~en~~kliV~~ 336 (362)
T KOG1252|consen 300 LALEEGLLVGISSGANVAAALKLAKRPENAGKLIVVT 336 (362)
T ss_pred HHHhhCeeecccchHHHHHHHHHHhccccCCcEEEEE
Confidence 33445588999999866433 2334455455555443
No 309
>cd00006 PTS_IIA_man PTS_IIA, PTS system, mannose/sorbose specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation. IIA subunits receive phosphoryl groups from HPr and transfer them to IIB subunits, which in turn phosphorylate the substrate.
Probab=35.57 E-value=1.3e+02 Score=19.75 Aligned_cols=70 Identities=16% Similarity=0.089 Sum_probs=46.5
Q ss_pred eEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCC-CceEEEEEchhHH
Q 024228 47 AVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGV-EKCTLVGVSYGGM 124 (270)
Q Consensus 47 ~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~l~G~S~Gg~ 124 (270)
.||..|| .-+. .....++.+... -.+.+++.. .+.+.+++.+.+.++++.++. +.++++.-=+||.
T Consensus 3 ili~sHG--~~A~-gi~~~~~~i~G~~~~i~~~~~~---------~~~~~~~~~~~i~~~i~~~~~~~~viil~Dl~GGS 70 (122)
T cd00006 3 IIIATHG--GFAS-GLLNSAEMILGEQENVEAIDFP---------PGESPDDLLEKIKAALAELDSGEGVLILTDLFGGS 70 (122)
T ss_pred EEEEcCH--HHHH-HHHHHHHHhcCCCCCeEEEEeC---------CCCCHHHHHHHHHHHHHHhCCCCcEEEEEeCCCCC
Confidence 5788899 2223 455566666554 577777764 235677888888888888864 4677777777876
Q ss_pred HHHH
Q 024228 125 VGFK 128 (270)
Q Consensus 125 ~a~~ 128 (270)
....
T Consensus 71 p~n~ 74 (122)
T cd00006 71 PNNA 74 (122)
T ss_pred HHHH
Confidence 6543
No 310
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=35.47 E-value=67 Score=24.39 Aligned_cols=17 Identities=24% Similarity=0.389 Sum_probs=15.5
Q ss_pred EEEEEchhHHHHHHHHh
Q 024228 115 TLVGVSYGGMVGFKMAE 131 (270)
Q Consensus 115 ~l~G~S~Gg~~a~~~a~ 131 (270)
.+.|-|.|+.++..++.
T Consensus 34 ~i~GtSaGAl~aa~~a~ 50 (246)
T cd07222 34 RFAGASAGSLVAAVLLT 50 (246)
T ss_pred EEEEECHHHHHHHHHhc
Confidence 78999999999999984
No 311
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=35.41 E-value=2.7e+02 Score=23.44 Aligned_cols=49 Identities=10% Similarity=0.102 Sum_probs=39.1
Q ss_pred hHHHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccc--cccEEEe
Q 024228 95 ASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDL--VESMVVT 143 (270)
Q Consensus 95 ~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~--v~~~i~~ 143 (270)
-+.+.+.+.++-+.+....+.+|--++=|.-|...|..+.+. +.++|+.
T Consensus 197 de~Lm~El~~Ik~~~~P~E~llVvDam~GQdA~~~A~aF~e~l~itGvIlT 247 (451)
T COG0541 197 DEELMDELKEIKEVINPDETLLVVDAMIGQDAVNTAKAFNEALGITGVILT 247 (451)
T ss_pred cHHHHHHHHHHHhhcCCCeEEEEEecccchHHHHHHHHHhhhcCCceEEEE
Confidence 345667777777778888899999999999999999888664 6777774
No 312
>cd01012 YcaC_related YcaC related amidohydrolases; E.coli YcaC is an homooctameric hydrolase with unknown specificity. Despite its weak sequence similarity, it is structurally related to other amidohydrolases and shares conserved active site residues with them. Multimerisation interface seems not to be conserved in all members.
Probab=34.84 E-value=1.5e+02 Score=20.41 Aligned_cols=51 Identities=18% Similarity=0.174 Sum_probs=33.9
Q ss_pred HHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCCc
Q 024228 101 CMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTE 151 (270)
Q Consensus 101 ~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~~ 151 (270)
++..+++..+.+.+++.|.+.-..+..-+........+-.++.+.......
T Consensus 78 ~L~~~L~~~gi~~lii~G~~T~~CV~~Ta~~a~~~g~~v~v~~Da~as~~~ 128 (157)
T cd01012 78 AFRKALKATGRKQVVLAGLETHVCVLQTALDLLEEGYEVFVVADACGSRSK 128 (157)
T ss_pred HHHHHHHhcCCCEEEEEEeeccHHHHHHHHHHHHCCCEEEEEeeCCCCCCH
Confidence 677788888999999999998766544432222223666666666655443
No 313
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=34.64 E-value=57 Score=22.96 Aligned_cols=21 Identities=19% Similarity=0.082 Sum_probs=16.9
Q ss_pred CceEEEEEchhHHHHHHHHhh
Q 024228 112 EKCTLVGVSYGGMVGFKMAEM 132 (270)
Q Consensus 112 ~~~~l~G~S~Gg~~a~~~a~~ 132 (270)
.--.+.|-|.||.+|+.++..
T Consensus 27 ~~d~i~GtS~Gal~a~~~~~~ 47 (204)
T PF01734_consen 27 RFDVISGTSAGALNAALLALG 47 (204)
T ss_dssp T-SEEEEECCHHHHHHHHHTC
T ss_pred CccEEEEcChhhhhHHHHHhC
Confidence 345789999999999887776
No 314
>PRK07053 glutamine amidotransferase; Provisional
Probab=34.25 E-value=2e+02 Score=21.64 Aligned_cols=33 Identities=12% Similarity=-0.009 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHhCCCceEEEEEchhHHHHHHHH
Q 024228 98 QAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMA 130 (270)
Q Consensus 98 ~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a 130 (270)
+.....++++..-...+-++|.|+|..+...+.
T Consensus 68 ~~~~~~~~i~~~~~~~~PvlGIC~G~Qlla~al 100 (234)
T PRK07053 68 FLAPEIALLRQRLAAGLPTLGICLGAQLIARAL 100 (234)
T ss_pred cHHHHHHHHHHHHHCCCCEEEECccHHHHHHHc
Confidence 444555666654334556899999998877665
No 315
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=34.01 E-value=2e+02 Score=21.47 Aligned_cols=13 Identities=15% Similarity=0.069 Sum_probs=5.9
Q ss_pred eEEEeCCCCCccc
Q 024228 47 AVVLLHPFGFDGI 59 (270)
Q Consensus 47 ~vv~~hG~~~~~~ 59 (270)
+|++.||....+.
T Consensus 140 ~vlmgHGt~h~s~ 152 (265)
T COG4822 140 LVLMGHGTDHHSN 152 (265)
T ss_pred EEEEecCCCccHH
Confidence 4444455444433
No 316
>PLN03019 carbonic anhydrase
Probab=33.61 E-value=81 Score=25.14 Aligned_cols=30 Identities=20% Similarity=0.197 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHhCCCceEEEEEchhHHHHH
Q 024228 98 QAECMAKGLRKLGVEKCTLVGVSYGGMVGF 127 (270)
Q Consensus 98 ~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~ 127 (270)
....|.-.+..++.+.|+|+|||-=|.+..
T Consensus 201 v~aSIEYAV~~L~V~~IVV~GHs~CGaVkA 230 (330)
T PLN03019 201 VGAAIEYAVLHLKVENIVVIGHSACGGIKG 230 (330)
T ss_pred cchhHHHHHHHhCCCEEEEecCCCchHHHH
Confidence 345677778889999999999997444443
No 317
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=33.39 E-value=43 Score=27.87 Aligned_cols=40 Identities=18% Similarity=0.180 Sum_probs=24.5
Q ss_pred eeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceee
Q 024228 202 EKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNL 245 (270)
Q Consensus 202 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 245 (270)
..+++..|+.|++....... ........++++|++|+.-+
T Consensus 377 tnviFtNG~~DPW~~lgv~~----~~~~~~~~~~I~g~~Hc~Dl 416 (434)
T PF05577_consen 377 TNVIFTNGELDPWRALGVTS----DSSDSVPAIVIPGGAHCSDL 416 (434)
T ss_dssp -SEEEEEETT-CCGGGS--S-----SSSSEEEEEETT--TTGGG
T ss_pred CeEEeeCCCCCCcccccCCC----CCCCCcccEEECCCeeeccc
Confidence 67999999999997655222 22234556789999999755
No 318
>TIGR03707 PPK2_P_aer polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by Pfam model pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1).
Probab=32.75 E-value=75 Score=23.89 Aligned_cols=68 Identities=12% Similarity=0.013 Sum_probs=43.3
Q ss_pred CCceEEEeCCCCCccc-ccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHH-HHHHHHHHhC-CCceEEEEE
Q 024228 44 KKHAVVLLHPFGFDGI-LTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAE-CMAKGLRKLG-VEKCTLVGV 119 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~-~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~-~~~~~l~~~~-~~~~~l~G~ 119 (270)
+.|+||++.|+.+++. ..-..+...|..+ ++|.++..| +.++... -+-.+-+.+. .+.+.++=-
T Consensus 29 ~~~vlIv~eG~DaAGKg~~I~~l~~~lDPRg~~v~~~~~p------------t~eE~~~p~lwRfw~~lP~~G~i~IF~r 96 (230)
T TIGR03707 29 GARVVIVFEGRDAAGKGGTIKRITEHLNPRGARVVALPKP------------SDRERTQWYFQRYVQHLPAAGEIVLFDR 96 (230)
T ss_pred CCCEEEEEeCCCCCCchHHHHHHHHhcCCCeeEEEeCCCC------------CHHHHcChHHHHHHHhCCCCCeEEEEeC
Confidence 3689999999987766 3555667777777 889887665 1222222 2344555554 347777766
Q ss_pred chhH
Q 024228 120 SYGG 123 (270)
Q Consensus 120 S~Gg 123 (270)
|+=+
T Consensus 97 SwY~ 100 (230)
T TIGR03707 97 SWYN 100 (230)
T ss_pred chhh
Confidence 6533
No 319
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=32.53 E-value=76 Score=24.47 Aligned_cols=66 Identities=11% Similarity=0.018 Sum_probs=41.5
Q ss_pred CCceEEEeCCCCCccc-ccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHH-HHHHHHHHHhC-CCceEEEEE
Q 024228 44 KKHAVVLLHPFGFDGI-LTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQA-ECMAKGLRKLG-VEKCTLVGV 119 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~-~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~-~~~~~~l~~~~-~~~~~l~G~ 119 (270)
..|+||++.|+.+++. ..-..+...|..+ ++|.++.-|. .++.. .-+-.+-.++. .+.+.|+=-
T Consensus 54 ~~~vlIv~eG~DaAGKG~~I~~l~~~lDPRg~~V~s~~~Pt------------~eE~~~p~lWRfw~~lP~~G~i~IF~R 121 (264)
T TIGR03709 54 RRSLLLVLQAMDAAGKDGTIRHVMSGVNPQGCQVTSFKAPS------------AEELDHDFLWRIHKALPERGEIGIFNR 121 (264)
T ss_pred CCcEEEEEECCCCCCchHHHHHHHHhcCCCeeEEEeCCCCC------------HHHHcCchHHHHHHhCCCCCeEEEEcC
Confidence 3589999999987766 4556677777777 9999886551 11111 22334555553 346777666
Q ss_pred ch
Q 024228 120 SY 121 (270)
Q Consensus 120 S~ 121 (270)
|+
T Consensus 122 SW 123 (264)
T TIGR03709 122 SH 123 (264)
T ss_pred cc
Confidence 65
No 320
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=32.48 E-value=2e+02 Score=22.89 Aligned_cols=84 Identities=19% Similarity=0.100 Sum_probs=46.4
Q ss_pred HHHHHhhcc-ceEEeecCCCCCCCCCCCC---CCChHHH--HHHHHHHHHHhCCCce------EEEEEch----------
Q 024228 64 FQVLALAKT-YEVYVPDFLFFGSSVTDRP---DRTASFQ--AECMAKGLRKLGVEKC------TLVGVSY---------- 121 (270)
Q Consensus 64 ~~~~~l~~~-~~v~~~d~~g~G~s~~~~~---~~~~~~~--~~~~~~~l~~~~~~~~------~l~G~S~---------- 121 (270)
..+..|.+. |.|+.+|-.-.|....... .+-.-++ .+-+.+++++..++.+ ..+|.|+
T Consensus 15 Htv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D~~~L~~vf~~~~idaViHFAa~~~VgESv~~Pl~Yy~NN 94 (329)
T COG1087 15 HTVRQLLKTGHEVVVLDNLSNGHKIALLKLQFKFYEGDLLDRALLTAVFEENKIDAVVHFAASISVGESVQNPLKYYDNN 94 (329)
T ss_pred HHHHHHHHCCCeEEEEecCCCCCHHHhhhccCceEEeccccHHHHHHHHHhcCCCEEEECccccccchhhhCHHHHHhhc
Confidence 344455555 9999999876665443221 1111111 2245566666555533 3566665
Q ss_pred -hHHHHHHHHhhCccccccEEEecccCC
Q 024228 122 -GGMVGFKMAEMYPDLVESMVVTCSVMG 148 (270)
Q Consensus 122 -Gg~~a~~~a~~~p~~v~~~i~~~~~~~ 148 (270)
+|.+.+.-+.+.- .|+.+|+.++...
T Consensus 95 v~gTl~Ll~am~~~-gv~~~vFSStAav 121 (329)
T COG1087 95 VVGTLNLIEAMLQT-GVKKFIFSSTAAV 121 (329)
T ss_pred hHhHHHHHHHHHHh-CCCEEEEecchhh
Confidence 3445544444433 3999999887653
No 321
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=32.40 E-value=2.4e+02 Score=23.73 Aligned_cols=63 Identities=14% Similarity=0.074 Sum_probs=39.7
Q ss_pred cceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCcc--ccccEEE
Q 024228 72 TYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPD--LVESMVV 142 (270)
Q Consensus 72 ~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~--~v~~~i~ 142 (270)
.|.++.+|-+|.-. .-+.+.+.+..+.+......++++--++-|.-+...|..+.+ .+.++|+
T Consensus 182 ~~DvViIDTaGr~~--------~d~~lm~El~~i~~~~~p~e~lLVlda~~Gq~a~~~a~~F~~~~~~~g~Il 246 (429)
T TIGR01425 182 NFDIIIVDTSGRHK--------QEDSLFEEMLQVAEAIQPDNIIFVMDGSIGQAAEAQAKAFKDSVDVGSVII 246 (429)
T ss_pred CCCEEEEECCCCCc--------chHHHHHHHHHHhhhcCCcEEEEEeccccChhHHHHHHHHHhccCCcEEEE
Confidence 38999999887422 223455666666666666667777777766666666655532 3666666
No 322
>COG4667 Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=31.84 E-value=70 Score=24.64 Aligned_cols=39 Identities=18% Similarity=0.156 Sum_probs=26.4
Q ss_pred HHHHHHHhCCCce-EEEEEchhHHHHHHHHhhCccccccEE
Q 024228 102 MAKGLRKLGVEKC-TLVGVSYGGMVGFKMAEMYPDLVESMV 141 (270)
Q Consensus 102 ~~~~l~~~~~~~~-~l~G~S~Gg~~a~~~a~~~p~~v~~~i 141 (270)
+.++++.- ..++ .++|.|+|+.-+..+..+.+.+-++++
T Consensus 30 LD~fl~a~-~~~f~~~~GvSAGA~n~~aYls~Q~gra~~~~ 69 (292)
T COG4667 30 LDEFLRAN-FNPFDLVVGVSAGALNLVAYLSKQRGRARRVI 69 (292)
T ss_pred HHHHHHhc-cCCcCeeeeecHhHHhHHHHhhcCCchHHHHH
Confidence 44444332 2344 467999999999999998887655544
No 323
>COG0426 FpaA Uncharacterized flavoproteins [Energy production and conversion]
Probab=31.78 E-value=3e+02 Score=22.78 Aligned_cols=73 Identities=15% Similarity=0.060 Sum_probs=41.6
Q ss_pred eEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEEc-----
Q 024228 47 AVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVS----- 120 (270)
Q Consensus 47 ~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~G~S----- 120 (270)
.|++.--++.+.. .-..+++.|.+. ..|..+++.- .|..++++.+...+-+++|.+
T Consensus 250 ~l~Y~smyg~T~~-ma~aiaegl~~~gv~v~~~~~~~-----------------~~~~eI~~~i~~a~~~vvGsPT~~~~ 311 (388)
T COG0426 250 DLIYDSMYGNTEK-MAQAIAEGLMKEGVDVEVINLED-----------------ADPSEIVEEILDAKGLVVGSPTINGG 311 (388)
T ss_pred EEEEecccCCHHH-HHHHHHHHhhhcCCceEEEEccc-----------------CCHHHHHHHHhhcceEEEecCcccCC
Confidence 3444434444444 556667777776 7787777641 133344444444567788887
Q ss_pred ----hhHHHHHHHHhhCcccc
Q 024228 121 ----YGGMVGFKMAEMYPDLV 137 (270)
Q Consensus 121 ----~Gg~~a~~~a~~~p~~v 137 (270)
++..+....+...+.+.
T Consensus 312 ~~p~i~~~l~~v~~~~~~~k~ 332 (388)
T COG0426 312 AHPPIQTALGYVLALAPKNKL 332 (388)
T ss_pred CCchHHHHHHHHHhccCcCce
Confidence 45555555556655544
No 324
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=31.76 E-value=86 Score=27.71 Aligned_cols=44 Identities=23% Similarity=0.012 Sum_probs=26.8
Q ss_pred CCceEEEeCCCCCccc--ccHHHHHHHhhcc-ce--EEeecCCCCCCCC
Q 024228 44 KKHAVVLLHPFGFDGI--LTWQFQVLALAKT-YE--VYVPDFLFFGSSV 87 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~--~~~~~~~~~l~~~-~~--v~~~d~~g~G~s~ 87 (270)
-+.+++++||.....- ..-..+...|... .. .+.+---||+.+.
T Consensus 550 i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~ 598 (620)
T COG1506 550 IKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSR 598 (620)
T ss_pred cCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCC
Confidence 4678999999876544 1334456777765 44 4444444566555
No 325
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=31.38 E-value=64 Score=25.42 Aligned_cols=17 Identities=29% Similarity=0.559 Sum_probs=15.0
Q ss_pred EEEEEchhHHHHHHHHh
Q 024228 115 TLVGVSYGGMVGFKMAE 131 (270)
Q Consensus 115 ~l~G~S~Gg~~a~~~a~ 131 (270)
.+.|-|.||.+|+.++.
T Consensus 44 li~GTStGgiiA~~la~ 60 (308)
T cd07211 44 YICGVSTGAILAFLLGL 60 (308)
T ss_pred EEEecChhHHHHHHHhc
Confidence 47899999999999876
No 326
>PF13709 DUF4159: Domain of unknown function (DUF4159)
Probab=31.09 E-value=2.2e+02 Score=21.03 Aligned_cols=37 Identities=14% Similarity=0.073 Sum_probs=31.9
Q ss_pred eeeeEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCC
Q 024228 202 EKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKA 239 (270)
Q Consensus 202 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (270)
.|++++.|..+...+.+..+.+.+.+. +.-+..++..
T Consensus 54 yP~ly~~g~~~~~~s~~e~~~Lr~Yl~-~GGfl~~D~~ 90 (207)
T PF13709_consen 54 YPFLYWPGHGDFPLSDEEIANLRRYLE-NGGFLLFDDR 90 (207)
T ss_pred CCEEEEeCCCCCCCCHHHHHHHHHHHH-cCCEEEEECC
Confidence 799999999999888899999999997 6677777654
No 327
>PRK02399 hypothetical protein; Provisional
Probab=30.97 E-value=3.1e+02 Score=22.80 Aligned_cols=93 Identities=19% Similarity=0.092 Sum_probs=56.6
Q ss_pred EEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCCCCC------------------------ChHHHHHHHH
Q 024228 49 VLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDR------------------------TASFQAECMA 103 (270)
Q Consensus 49 v~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~------------------------~~~~~~~~~~ 103 (270)
|++=|...++...+..+...+.+. ..|+.+|.-..|..... .+. ..+.+.+-..
T Consensus 6 I~iigT~DTK~~E~~yl~~~i~~~g~~v~~iDv~~~~~p~~~-~dis~~~Va~~~g~~~~~~~~~~dRg~ai~~M~~ga~ 84 (406)
T PRK02399 6 IYIAGTLDTKGEELAYVKDLIEAAGLEVVTVDVSGLGEPPFE-PDISAEEVAEAAGDGIEAVFCGGDRGSAMAAMAEGAA 84 (406)
T ss_pred EEEEeccCCcHHHHHHHHHHHHHCCCceEEEecCCCCCCCCC-CCCCHHHHHHHcCCCHHHhhcCccHHHHHHHHHHHHH
Confidence 444466666664666667777775 99999998434322111 011 1122333344
Q ss_pred HHHHHh----CCCceEEEEEchhHHHHHHHHhhCccccccEEE
Q 024228 104 KGLRKL----GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVV 142 (270)
Q Consensus 104 ~~l~~~----~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~ 142 (270)
.+++.+ ++.-++-+|-|.|..++..+....|--+-++++
T Consensus 85 ~~v~~L~~~g~i~gviglGGs~GT~lat~aMr~LPiG~PKlmV 127 (406)
T PRK02399 85 AFVRELYERGDVAGVIGLGGSGGTALATPAMRALPIGVPKLMV 127 (406)
T ss_pred HHHHHHHhcCCccEEEEecCcchHHHHHHHHHhCCCCCCeEEE
Confidence 444433 244577889999999999999888866666554
No 328
>PF15566 Imm18: Immunity protein 18
Probab=30.66 E-value=69 Score=17.53 Aligned_cols=31 Identities=13% Similarity=0.142 Sum_probs=23.2
Q ss_pred hHHHHHHHHHHHHHhCCCceEEEEEchhHHH
Q 024228 95 ASFQAECMAKGLRKLGVEKCTLVGVSYGGMV 125 (270)
Q Consensus 95 ~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~ 125 (270)
++.+.+++..+......+.++++--||||.-
T Consensus 4 L~~L~~~l~~L~~~~~~~H~Hlmtp~WgG~E 34 (52)
T PF15566_consen 4 LELLQDQLENLQEKEPFDHEHLMTPDWGGEE 34 (52)
T ss_pred HHHHHHHHHHHHhccCCCCceeccccccccc
Confidence 4456677777777766778999999999853
No 329
>COG3621 Patatin [General function prediction only]
Probab=30.63 E-value=1.6e+02 Score=23.70 Aligned_cols=52 Identities=15% Similarity=0.055 Sum_probs=33.3
Q ss_pred cceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCC----ceEE-EEEchhHHHHHHHHhhCc
Q 024228 72 TYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVE----KCTL-VGVSYGGMVGFKMAEMYP 134 (270)
Q Consensus 72 ~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~l-~G~S~Gg~~a~~~a~~~p 134 (270)
.|++..+|--|.-. .+...+...|++.... .+.+ .|-|-||.+++.+|...+
T Consensus 8 k~rIlsldGGGvrG-----------~i~lE~lr~ieqiqGkkl~e~FDl~~GTSiGgilal~La~~ks 64 (394)
T COG3621 8 KYRILSLDGGGVRG-----------AILLEKLRIIEQIQGKKLCEYFDLIGGTSIGGILALGLALGKS 64 (394)
T ss_pred ceeEEEecCCcccc-----------HHHHHHHHHHHHHhCCcceeeEeeecCccHHHHHHHHHhcCCC
Confidence 47888887433211 3455566667765433 3444 589999999999887654
No 330
>COG1092 Predicted SAM-dependent methyltransferases [General function prediction only]
Probab=30.15 E-value=2.1e+02 Score=23.67 Aligned_cols=19 Identities=16% Similarity=0.261 Sum_probs=16.2
Q ss_pred cceEEeecCCCCCCCCCCC
Q 024228 72 TYEVYVPDFLFFGSSVTDR 90 (270)
Q Consensus 72 ~~~v~~~d~~g~G~s~~~~ 90 (270)
.|.+|.+|.|.+++|....
T Consensus 290 ~fDlIilDPPsF~r~k~~~ 308 (393)
T COG1092 290 KFDLIILDPPSFARSKKQE 308 (393)
T ss_pred cccEEEECCcccccCcccc
Confidence 3999999999999987544
No 331
>cd03131 GATase1_HTS Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS). Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS). HTS, the first enzyme in methionine biosynthesis in Escherichia coli, transfers a succinyl group from succinyl-CoA to homoserine forming succinyl homoserine. It has been suggested that the succinyl group of succinyl-CoA is initially transferred to an enzyme nucleophile before subsequent transfer to homoserine. The catalytic triad typical of GATase1 domains is not conserved in this GATase1-like domain. However, in common with GATase1 domains a reactive cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. It has been proposed that this cys is in the active site of the molecule. However, as succinyl has been found bound to a conserved lysine residue, this conserved cys may play a role in dimer formation. HTS acti
Probab=29.78 E-value=28 Score=24.84 Aligned_cols=37 Identities=8% Similarity=-0.147 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhC
Q 024228 97 FQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMY 133 (270)
Q Consensus 97 ~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 133 (270)
.+-+.+.++++.....-.-.+|.|||+..|+.++---
T Consensus 82 ~Yw~El~~i~dwa~~~v~stl~iCWgaqaal~~~yGi 118 (175)
T cd03131 82 DYWEELTEILDWAKTHVTSTLFSCWAAMAALYYFYGI 118 (175)
T ss_pred chHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHcCc
Confidence 3444566666666544456789999999999887543
No 332
>COG0813 DeoD Purine-nucleoside phosphorylase [Nucleotide transport and metabolism]
Probab=29.75 E-value=1.2e+02 Score=22.63 Aligned_cols=39 Identities=15% Similarity=0.241 Sum_probs=26.0
Q ss_pred CCCceEEEEEchh----HHHHHHHHhhCccccccEEEecccCCCC
Q 024228 110 GVEKCTLVGVSYG----GMVGFKMAEMYPDLVESMVVTCSVMGLT 150 (270)
Q Consensus 110 ~~~~~~l~G~S~G----g~~a~~~a~~~p~~v~~~i~~~~~~~~~ 150 (270)
+.+++.+.||.|| +..+..+...+ .|+.+|-+++.....
T Consensus 54 KGk~iSvmg~GmGipS~sIY~~ELi~~y--~Vk~iIRvGt~Gal~ 96 (236)
T COG0813 54 KGKKISVMGHGMGIPSISIYSRELITDY--GVKKIIRVGTCGALS 96 (236)
T ss_pred cCcEEEEEEecCCCccHHHHHHHHHHHh--CcceEEEEEcccccc
Confidence 4568888999998 34444444444 388888887766544
No 333
>PF00857 Isochorismatase: Isochorismatase family; InterPro: IPR000868 This is a family of hydrolase enzymes. Isochorismatase, also known as 2,3 dihydro-2,3 dihydroxybenzoate synthase catalyses the conversion of isochorismate, in the presence of water, to 2,3-dihydroxybenzoate and pyruvate (3.3.2.1 from EC).; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1XN4_A 3KL2_F 1YZV_A 3IRV_A 1IM5_A 1ILW_A 3PL1_A 1NF9_A 1NF8_A 1X9G_A ....
Probab=29.66 E-value=1e+02 Score=21.54 Aligned_cols=51 Identities=20% Similarity=0.201 Sum_probs=32.4
Q ss_pred HHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCC
Q 024228 100 ECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLT 150 (270)
Q Consensus 100 ~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~ 150 (270)
.++..+++..+.+.++|.|.+.-..+..-+...+..-++-.|+.+......
T Consensus 101 t~L~~~L~~~gi~~vil~G~~t~~CV~~Ta~~a~~~g~~v~v~~Da~~~~~ 151 (174)
T PF00857_consen 101 TDLDEILRKRGIDTVILCGVATDVCVLATARDAFDRGYRVIVVEDACASYS 151 (174)
T ss_dssp SSHHHHHHHTTESEEEEEEESTTTHHHHHHHHHHHTT-EEEEEEEEEEBSS
T ss_pred ccccccccccccceEEEcccccCcEEehhHHHHHHCCCEEEEEChhhcCCC
Confidence 357778888999999999999876664333222222366666666655544
No 334
>cd00431 cysteine_hydrolases Cysteine hydrolases; This family contains amidohydrolases, like CSHase (N-carbamoylsarcosine amidohydrolase), involved in creatine metabolism and nicotinamidase, converting nicotinamide to nicotinic acid and ammonia in the pyridine nucleotide cycle. It also contains isochorismatase, an enzyme that catalyzes the conversion of isochorismate to 2,3-dihydroxybenzoate and pyruvate, via the hydrolysis of the vinyl ether bond, and other related enzymes with unknown function.
Probab=29.16 E-value=1.8e+02 Score=19.94 Aligned_cols=48 Identities=15% Similarity=0.087 Sum_probs=30.0
Q ss_pred HHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCC
Q 024228 101 CMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMG 148 (270)
Q Consensus 101 ~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~ 148 (270)
.+.++|+..+.+.++|+|.+.-..+...+......-.+-.|+-+....
T Consensus 100 ~l~~~L~~~~i~~vil~G~~t~~CV~~T~~~a~~~G~~v~vi~Da~~s 147 (161)
T cd00431 100 DLDELLRERGIDTLVVCGIATDICVLATARDALDLGYRVIVVEDACAT 147 (161)
T ss_pred CHHHHHHHCCCCEEEEEecCcChhHHHHHHHHHHCCCEEEEehhhccc
Confidence 567788888999999999998766644332222122444455444443
No 335
>PF04084 ORC2: Origin recognition complex subunit 2 ; InterPro: IPR007220 The Origin Recognition Complex (ORC) is a six-subunit ATP-dependent DNA-binding complex encoded in yeast by ORC1-6 []. ORC is a central component for eukaryotic DNA replication, and binds chromatin at replication origins throughout the cell cycle []. ORC directs DNA replication throughout the genome and is required for its initiation [, , ]. ORC bound at replication origins serves as the foundation for assembly of the pre-replicative complex (pre-RC), which includes Cdc6, Tah11 (aka Cdt1), and the Mcm2-7 complex [, , ]. Pre-RC assembly during G1 is required for replication licensing of chromosomes prior to DNA synthesis during S phase [, , ]. Cell cycle-regulated phosphorylation of Orc2, Orc6, Cdc6, and MCM by the cyclin-dependent protein kinase Cdc28 regulates initiation of DNA replication, including blocking reinitiation in G2/M phase [, , , ]. In yeast, ORC also plays a role in the establishment of silencing at the mating-type loci Hidden MAT Left (HML) and Hidden MAT Right (HMR) [, , ]. ORC participates in the assembly of transcriptionally silent chromatin at HML and HMR by recruiting the Sir1 silencing protein to the HML and HMR silencers [, , ]. Both Orc1 and Orc5 bind ATP, though only Orc1 has ATPase activity []. The binding of ATP by Orc1 is required for ORC binding to DNA and is essential for cell viability []. The ATPase activity of Orc1 is involved in formation of the pre-RC [, , ]. ATP binding by Orc5 is crucial for the stability of ORC as a whole. Only the Orc1-5 subunits are required for origin binding; Orc6 is essential for maintenance of pre-RCs once formed []. Interactions within ORC suggest that Orc2-3-6 may form a core complex []. ORC homologues have been found in various eukaryotes, including fission yeast, insects, amphibians, and humans []. This entry represents subunit 2, which binds the origin of replication. It plays a role in chromosome replication and mating type transcriptional silencing.; GO: 0006260 DNA replication, 0000808 origin recognition complex, 0005634 nucleus
Probab=28.85 E-value=3.1e+02 Score=22.05 Aligned_cols=33 Identities=18% Similarity=0.031 Sum_probs=23.4
Q ss_pred CChHHHHHHHHHHHHHhC-CCceEEEEEchhHHH
Q 024228 93 RTASFQAECMAKGLRKLG-VEKCTLVGVSYGGMV 125 (270)
Q Consensus 93 ~~~~~~~~~~~~~l~~~~-~~~~~l~G~S~Gg~~ 125 (270)
....+.++.+...++... ..+++|+=|+.-|..
T Consensus 117 ~~~~~~~~~i~~~l~~~~~~~~l~lvIHnIDg~~ 150 (326)
T PF04084_consen 117 KSPSEQLDFIISYLESRPSPPPLYLVIHNIDGPS 150 (326)
T ss_pred CCHHHHHHHHHHHHhccCCCCceEEEEECCCChh
Confidence 455666666777776665 568999999987655
No 336
>TIGR03607 patatin-related protein. This bacterial protein family contains an N-terminal patatin domain, where patatins are plant storage proteins capable of phospholipase activity (see pfam01734). Regions of strong sequence conservation are separated by regions of significant sequence and length variability. Members of the family are distributed sporadically among bacteria. The function is unknown.
Probab=28.40 E-value=1.4e+02 Score=27.12 Aligned_cols=33 Identities=27% Similarity=0.330 Sum_probs=22.5
Q ss_pred HHHHHHHHH---HhCCCceEEEEEchhHHHHHHHHh
Q 024228 99 AECMAKGLR---KLGVEKCTLVGVSYGGMVGFKMAE 131 (270)
Q Consensus 99 ~~~~~~~l~---~~~~~~~~l~G~S~Gg~~a~~~a~ 131 (270)
..++.+.+. ..+..--++.|.|+||.++..+|.
T Consensus 50 Y~~l~~~l~~~~~~~~~~d~iaGTSAGAInaa~lA~ 85 (739)
T TIGR03607 50 YGALLELLGAHLRLRVRVDVISGTSAGGINGVLLAY 85 (739)
T ss_pred HHHHHHHhhhhhccCCCCceEEeeCHHHHHHHHHHc
Confidence 344444554 234444578899999999988886
No 337
>cd01715 ETF_alpha The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The alpha subunit of ETF is structurally related to the bacterial nitrogen fixation protein fixB which could play a role in a redox process and feed electrons to ferredoxin.
Probab=28.29 E-value=1.7e+02 Score=20.51 Aligned_cols=53 Identities=17% Similarity=0.092 Sum_probs=37.4
Q ss_pred ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEEc-hhHHHHHHHHhhC
Q 024228 73 YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVS-YGGMVGFKMAEMY 133 (270)
Q Consensus 73 ~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~G~S-~Gg~~a~~~a~~~ 133 (270)
-+++.++.+. ...++.+.+++.+.++++..+ ..++|+|+| .|.-++.++|.+.
T Consensus 53 d~v~~~~~~~-------~~~~~~~~~a~al~~~i~~~~-p~~Vl~~~t~~g~~la~rlAa~L 106 (168)
T cd01715 53 DKVLVAEDPA-------LAHYLAEPYAPALVALAKKEK-PSHILAGATSFGKDLAPRVAAKL 106 (168)
T ss_pred CEEEEecChh-------hcccChHHHHHHHHHHHHhcC-CCEEEECCCccccchHHHHHHHh
Confidence 4666665432 123567888888999888876 477777775 5778888888775
No 338
>cd01015 CSHase N-carbamoylsarcosine amidohydrolase (CSHase) hydrolyzes N-carbamoylsarcosine to sarcosine, carbon dioxide and ammonia. CSHase is involved in one of the two alternative pathways for creatinine degradation to glycine in microorganisms.This CSHase-containing pathway degrades creatinine via N-methylhydantoin N-carbamoylsarcosine and sarcosine to glycine. Enzymes of this pathway are used in the diagnosis for renal disfunction, for determining creatinine levels in urine and serum.
Probab=28.22 E-value=2e+02 Score=20.38 Aligned_cols=50 Identities=20% Similarity=0.217 Sum_probs=32.0
Q ss_pred HHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCC
Q 024228 100 ECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGL 149 (270)
Q Consensus 100 ~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~ 149 (270)
.++..+++..+.++++|+|.+.-..+-.-+......-.+-.++.+.....
T Consensus 103 t~L~~~L~~~gi~~vvi~G~~t~~CV~~Ta~~A~~~Gy~v~vv~Da~a~~ 152 (179)
T cd01015 103 TSLAATLTARGVDTLIVAGCSTSGCIRATAVDAMQHGFRPIVVRECVGDR 152 (179)
T ss_pred CcHHHHHHHcCCCEEEEeeecccHhHHHHHHHHHHCCCeEEEeeccccCC
Confidence 46778889999999999999986655332222221225556666655543
No 339
>PF02590 SPOUT_MTase: Predicted SPOUT methyltransferase; InterPro: IPR003742 This family of proteins are predicted to be SPOUT methyltransferases []. ; GO: 0008168 methyltransferase activity, 0006364 rRNA processing, 0005737 cytoplasm; PDB: 1VH0_E 4FAK_A 1TO0_G 1O6D_A 1NS5_B.
Probab=28.22 E-value=1e+02 Score=21.49 Aligned_cols=50 Identities=12% Similarity=0.008 Sum_probs=27.5
Q ss_pred HHHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCc-eEEEEEchhHH
Q 024228 66 VLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEK-CTLVGVSYGGM 124 (270)
Q Consensus 66 ~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~l~G~S~Gg~ 124 (270)
...+.++-.++++|-.|-- .+.+++++.+..+... +..+ ++++|-+.|=.
T Consensus 61 l~~i~~~~~~i~Ld~~Gk~--------~sS~~fA~~l~~~~~~-g~~~i~F~IGG~~G~~ 111 (155)
T PF02590_consen 61 LKKIPPNDYVILLDERGKQ--------LSSEEFAKKLERWMNQ-GKSDIVFIIGGADGLS 111 (155)
T ss_dssp HCTSHTTSEEEEE-TTSEE----------HHHHHHHHHHHHHT-TS-EEEEEE-BTTB--
T ss_pred HhhccCCCEEEEEcCCCcc--------CChHHHHHHHHHHHhc-CCceEEEEEecCCCCC
Confidence 3344455678899987642 4556667666666554 3333 56789999843
No 340
>COG1576 Uncharacterized conserved protein [Function unknown]
Probab=28.07 E-value=2.1e+02 Score=19.97 Aligned_cols=56 Identities=18% Similarity=0.037 Sum_probs=33.4
Q ss_pred HHHHHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCc-eEEEEEchhHHHHHHH
Q 024228 64 FQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEK-CTLVGVSYGGMVGFKM 129 (270)
Q Consensus 64 ~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~l~G~S~Gg~~a~~~ 129 (270)
.+...+.++-.|++.|.+|-- .+.+.+++.+..+-+ .+ .. .+++|-|.|=.=++..
T Consensus 59 ~il~~i~~~~~vi~Ld~~Gk~--------~sSe~fA~~l~~~~~-~G-~~i~f~IGG~~Gl~~~~~~ 115 (155)
T COG1576 59 AILAAIPKGSYVVLLDIRGKA--------LSSEEFADFLERLRD-DG-RDISFLIGGADGLSEAVKA 115 (155)
T ss_pred HHHHhcCCCCeEEEEecCCCc--------CChHHHHHHHHHHHh-cC-CeEEEEEeCcccCCHHHHH
Confidence 345566666789999998643 344555555544333 34 44 4578988885444443
No 341
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=28.00 E-value=1.8e+02 Score=25.49 Aligned_cols=47 Identities=15% Similarity=0.289 Sum_probs=30.9
Q ss_pred HHHHHHHHHHh--CCCceEEEEE------chhHHHHHHHHhhCccccccEEEeccc
Q 024228 99 AECMAKGLRKL--GVEKCTLVGV------SYGGMVGFKMAEMYPDLVESMVVTCSV 146 (270)
Q Consensus 99 ~~~~~~~l~~~--~~~~~~l~G~------S~Gg~~a~~~a~~~p~~v~~~i~~~~~ 146 (270)
+.++...++.+ ..++++++|| |.|+.+++..-+..-++ .+.++++|.
T Consensus 323 aRvis~al~d~i~e~d~VfImGHk~pDmDalGsAig~~~~A~~~~~-~a~~v~dp~ 377 (655)
T COG3887 323 ARVISTALSDIIKESDNVFIMGHKFPDMDALGSAIGMQKFASMNNK-EAFAVLDPE 377 (655)
T ss_pred HHHHHHHHHHHHhhcCcEEEEccCCCChHHHHHHHHHHHHHHhccc-ccEEEECcc
Confidence 44444444433 2569999999 67999988766654443 667777764
No 342
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=27.99 E-value=60 Score=26.14 Aligned_cols=18 Identities=22% Similarity=0.183 Sum_probs=15.6
Q ss_pred EEEEEchhHHHHHHHHhh
Q 024228 115 TLVGVSYGGMVGFKMAEM 132 (270)
Q Consensus 115 ~l~G~S~Gg~~a~~~a~~ 132 (270)
.+.|-|.||.+|+.++..
T Consensus 44 lIaGTStGgIIAa~la~g 61 (344)
T cd07217 44 FVGGTSTGSIIAACIALG 61 (344)
T ss_pred EEEEecHHHHHHHHHHcC
Confidence 567999999999999864
No 343
>KOG3086 consensus Predicted dioxygenase [General function prediction only]
Probab=27.98 E-value=1.7e+02 Score=22.23 Aligned_cols=56 Identities=11% Similarity=0.240 Sum_probs=40.1
Q ss_pred CChHHHHHHHHHHHHHhCCC----ceEE---EEEchhH-HHHHHHHhhCccccccEEEecccCC
Q 024228 93 RTASFQAECMAKGLRKLGVE----KCTL---VGVSYGG-MVGFKMAEMYPDLVESMVVTCSVMG 148 (270)
Q Consensus 93 ~~~~~~~~~~~~~l~~~~~~----~~~l---~G~S~Gg-~~a~~~a~~~p~~v~~~i~~~~~~~ 148 (270)
.+..++..++..+|...+.. +.++ .|.++-| ..|..++...|..++++.+++|...
T Consensus 17 ~~~~~Ls~QL~~wL~~~~~~~~paRaiIaPHAGY~YcG~~Aa~ay~qvdps~v~RIFILGPSHH 80 (296)
T KOG3086|consen 17 ASGPQLSAQLEGWLSQVTLTKGPARAIIAPHAGYTYCGSCAAYAYKQVDPSNVQRIFILGPSHH 80 (296)
T ss_pred CCHHHHHHHHHHHHhccCCCCCCceEEEcCCCCcccchHHHHHHHhhcChhHeeEEEEecCcce
Confidence 35667788899998876532 4555 4788755 4556666777888999999998754
No 344
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=27.79 E-value=60 Score=25.31 Aligned_cols=19 Identities=26% Similarity=0.499 Sum_probs=16.5
Q ss_pred EEEEEchhHHHHHHHHhhC
Q 024228 115 TLVGVSYGGMVGFKMAEMY 133 (270)
Q Consensus 115 ~l~G~S~Gg~~a~~~a~~~ 133 (270)
.++|-|.||.+|+.++...
T Consensus 37 ~i~GTSaGaiia~~la~g~ 55 (288)
T cd07213 37 LFAGTSAGSLIALGLALGY 55 (288)
T ss_pred EEEEeCHHHHHHHHHHcCc
Confidence 5789999999999998754
No 345
>cd00382 beta_CA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=27.70 E-value=1e+02 Score=20.27 Aligned_cols=29 Identities=21% Similarity=0.283 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHhCCCceEEEEEchhHHHH
Q 024228 98 QAECMAKGLRKLGVEKCTLVGVSYGGMVG 126 (270)
Q Consensus 98 ~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a 126 (270)
....+.-.+..++.+.++++||+--|.+.
T Consensus 45 ~~~sl~~av~~l~v~~ivV~gHt~CG~v~ 73 (119)
T cd00382 45 VLASLEYAVEVLGVKHIIVCGHTDCGAVK 73 (119)
T ss_pred HHHHHHHHHHhhCCCEEEEEccCCCcHHH
Confidence 45566677788899999999997655544
No 346
>KOG2316 consensus Predicted ATPase (PP-loop superfamily) [General function prediction only]
Probab=27.05 E-value=1.6e+02 Score=21.99 Aligned_cols=63 Identities=14% Similarity=0.084 Sum_probs=39.6
Q ss_pred HHHhhccceEEeecCCCCCCCCCCCC--CCChHHHHHHHHHHHHHhCCCceEEEEEchhHHHHHH
Q 024228 66 VLALAKTYEVYVPDFLFFGSSVTDRP--DRTASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFK 128 (270)
Q Consensus 66 ~~~l~~~~~v~~~d~~g~G~s~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~ 128 (270)
+..+++...+=.+-.+-.|.|..... ..+..+-++|+.++++....+-.-+-|.|.|+.+.-.
T Consensus 56 i~lyaecm~lPlyrr~i~g~s~nq~l~Y~~t~~DEvEDLy~ll~~VK~~~p~~eaVS~GAIlS~Y 120 (277)
T KOG2316|consen 56 IDLYAECMGLPLYRRRIRGRSINQKLQYTKTEGDEVEDLYELLKTVKEKIPDVEAVSVGAILSDY 120 (277)
T ss_pred HHHHHHHhcCceeeeeccCcccccccccccCCCchHHHHHHHHHHHHhhCCCceeeehhhhHhHH
Confidence 34455543333333333455554333 3556677899999999887544578899999987653
No 347
>COG0518 GuaA GMP synthase - Glutamine amidotransferase domain [Nucleotide transport and metabolism]
Probab=26.91 E-value=1.4e+02 Score=21.82 Aligned_cols=37 Identities=14% Similarity=0.077 Sum_probs=27.1
Q ss_pred ChHHHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHH
Q 024228 94 TASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMA 130 (270)
Q Consensus 94 ~~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a 130 (270)
..+.++.....+|..+.....-++|.|+|..+...++
T Consensus 60 ~~~~w~~~~~~~i~~~~~p~~pvLGIC~G~Ql~A~~l 96 (198)
T COG0518 60 DEDPWLPREKDLIKDAGVPGKPVLGICLGHQLLAKAL 96 (198)
T ss_pred cccccchhHHHHHHHhCCCCCCEEEEChhHHHHHHHh
Confidence 3333677778888887766667899999998776554
No 348
>cd01011 nicotinamidase Nicotinamidase/pyrazinamidase (PZase). Nicotinamidase, a ubiquitous enzyme in prokaryotes, converts nicotinamide to nicotinic acid (niacin) and ammonia, which in turn can be recycled to make nicotinamide adenine dinucleotide (NAD). The same enzyme is also called pyrazinamidase, because in converts the tuberculosis drug pyrazinamide (PZA) into its active form pyrazinoic acid (POA).
Probab=26.74 E-value=2.5e+02 Score=20.33 Aligned_cols=51 Identities=18% Similarity=0.202 Sum_probs=32.6
Q ss_pred HHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCC
Q 024228 100 ECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLT 150 (270)
Q Consensus 100 ~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~ 150 (270)
.++..+|+..+.+.++++|...-..+...+........+-.++.++.....
T Consensus 127 t~L~~~L~~~~i~~lii~G~~t~~CV~~T~~~a~~~g~~v~v~~Da~~~~~ 177 (196)
T cd01011 127 TGLAEYLRERGIDRVDVVGLATDYCVKATALDALKAGFEVRVLEDACRAVD 177 (196)
T ss_pred hhHHHHHHHCCCCEEEEEEecccHHHHHHHHHHHHCCCEEEEeccccCCCC
Confidence 467888888999999999998866553322222212366666666555443
No 349
>PF03490 Varsurf_PPLC: Variant-surface-glycoprotein phospholipase C; InterPro: IPR003633 Variant-surface-glycoprotein phospholipase C, by hydrolysis of the attached glycolipid, releases soluble variant surface glycoprotein containing phosphoinositol from the cell wall after lysis. It catalyses the conversion of variant-surface-glycoprotein 1,2 didecanoyl-SN-phosphatidylinositol and water to 1,2-didecanoylglycerol and the soluble variant-surface-glycoprotein. It also cleaves similar membrane anchors on some mammalian proteins.; GO: 0047396 glycosylphosphatidylinositol diacylglycerol-lyase activity, 0006650 glycerophospholipid metabolic process
Probab=26.65 E-value=79 Score=17.01 Aligned_cols=27 Identities=4% Similarity=0.074 Sum_probs=21.4
Q ss_pred CChHHHHHHHHHHHHHhCCCceEEEEE
Q 024228 93 RTASFQAECMAKGLRKLGVEKCTLVGV 119 (270)
Q Consensus 93 ~~~~~~~~~~~~~l~~~~~~~~~l~G~ 119 (270)
...+.|..|+...|..+.+..+.++|-
T Consensus 6 w~PqSWM~DLrS~I~~~~I~ql~ipGs 32 (51)
T PF03490_consen 6 WHPQSWMSDLRSSIGEMAITQLFIPGS 32 (51)
T ss_pred cCcHHHHHHHHHHHhcceeeeEEeccc
Confidence 356778899999999888888887763
No 350
>PLN03014 carbonic anhydrase
Probab=26.61 E-value=1.3e+02 Score=24.24 Aligned_cols=30 Identities=27% Similarity=0.471 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHhCCCceEEEEEch-hHHHHH
Q 024228 98 QAECMAKGLRKLGVEKCTLVGVSY-GGMVGF 127 (270)
Q Consensus 98 ~~~~~~~~l~~~~~~~~~l~G~S~-Gg~~a~ 127 (270)
....|.-.+..++.+.|+|+|||- ||.-|+
T Consensus 206 v~asLEYAV~~L~V~~IVV~GHs~CGaV~Aa 236 (347)
T PLN03014 206 VGAAIEYAVLHLKVENIVVIGHSACGGIKGL 236 (347)
T ss_pred chhHHHHHHHHhCCCEEEEeCCCCchHHHHH
Confidence 345666778889999999999996 444443
No 351
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=26.51 E-value=1.3e+02 Score=23.76 Aligned_cols=34 Identities=12% Similarity=0.093 Sum_probs=26.2
Q ss_pred HHHHHHHHHHhC----CCceEEEEEc--hhHHHHHHHHhh
Q 024228 99 AECMAKGLRKLG----VEKCTLVGVS--YGGMVGFKMAEM 132 (270)
Q Consensus 99 ~~~~~~~l~~~~----~~~~~l~G~S--~Gg~~a~~~a~~ 132 (270)
...+.+++++.+ .+++.++|.| +|..++..+...
T Consensus 143 p~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~ 182 (301)
T PRK14194 143 PSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQA 182 (301)
T ss_pred HHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHC
Confidence 456677777764 3589999997 899999888765
No 352
>PLN00416 carbonate dehydratase
Probab=26.35 E-value=1.7e+02 Score=22.53 Aligned_cols=29 Identities=21% Similarity=0.218 Sum_probs=21.8
Q ss_pred HHHHHHHHHHhCCCceEEEEEchhHHHHH
Q 024228 99 AECMAKGLRKLGVEKCTLVGVSYGGMVGF 127 (270)
Q Consensus 99 ~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~ 127 (270)
...|.-.+..++.+.|+|+|||-=|.+..
T Consensus 127 ~asLEyAv~~L~V~~IVV~GHs~CGaV~A 155 (258)
T PLN00416 127 GAAVEYAVVHLKVENILVIGHSCCGGIKG 155 (258)
T ss_pred hhHHHHHHHHhCCCEEEEecCCCchHHHH
Confidence 45566778889999999999997444443
No 353
>PRK14046 malate--CoA ligase subunit beta; Provisional
Probab=26.28 E-value=98 Score=25.52 Aligned_cols=39 Identities=26% Similarity=0.393 Sum_probs=31.0
Q ss_pred CCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCC
Q 024228 111 VEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLT 150 (270)
Q Consensus 111 ~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~ 150 (270)
..+++++|.+.||...=..+.+.|+.+..+.+ ++.....
T Consensus 118 ~g~~v~~~s~~GGv~iEe~~~~~p~~i~~~~i-~~~~~~~ 156 (392)
T PRK14046 118 SERVRVIASARGGMEIEEIAAKEPEAIIQVVV-EPAVGLQ 156 (392)
T ss_pred CCcEEEEEeCCCCCchHHHhhhChhheEEEEc-CCCCCCC
Confidence 35789999999999999999999998888665 4444433
No 354
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=26.22 E-value=73 Score=33.52 Aligned_cols=30 Identities=20% Similarity=0.227 Sum_probs=24.0
Q ss_pred HHHHHHHhCCCceEEEEEchhHHHHHHHHh
Q 024228 102 MAKGLRKLGVEKCTLVGVSYGGMVGFKMAE 131 (270)
Q Consensus 102 ~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~ 131 (270)
+.++++.+++.+-.++|||+|=+.|+.++.
T Consensus 664 l~~lL~~~Gi~Pd~v~GHSlGE~aAa~aAG 693 (2582)
T TIGR02813 664 QYKLFTQAGFKADMTAGHSFGELSALCAAG 693 (2582)
T ss_pred HHHHHHHcCCccceeecCCHHHHHHHHHhC
Confidence 345567788889999999999988887664
No 355
>PRK00103 rRNA large subunit methyltransferase; Provisional
Probab=26.12 E-value=2.4e+02 Score=19.80 Aligned_cols=53 Identities=15% Similarity=-0.070 Sum_probs=29.5
Q ss_pred HHHHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEEchhHHH
Q 024228 65 QVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVSYGGMV 125 (270)
Q Consensus 65 ~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~ 125 (270)
+...+..+-.++++|-+|-- .+.+++++.+..+...-..+-++++|-+.|=.-
T Consensus 60 il~~l~~~~~~i~LDe~Gk~--------~sS~~fA~~l~~~~~~g~~~i~F~IGGa~G~~~ 112 (157)
T PRK00103 60 ILAALPKGARVIALDERGKQ--------LSSEEFAQELERWRDDGRSDVAFVIGGADGLSP 112 (157)
T ss_pred HHhhCCCCCEEEEEcCCCCc--------CCHHHHHHHHHHHHhcCCccEEEEEcCccccCH
Confidence 34445444558888887532 345566666665533211234567788777433
No 356
>PRK09065 glutamine amidotransferase; Provisional
Probab=25.99 E-value=1.1e+02 Score=23.10 Aligned_cols=34 Identities=24% Similarity=0.224 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHH
Q 024228 97 FQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMA 130 (270)
Q Consensus 97 ~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a 130 (270)
.+...+.++++..-..++-++|.|+|..+...+.
T Consensus 72 ~w~~~~~~~i~~~~~~~~PvlGIC~G~Qlla~al 105 (237)
T PRK09065 72 DWSERTADWLRQAAAAGMPLLGICYGHQLLAHAL 105 (237)
T ss_pred hhHHHHHHHHHHHHHCCCCEEEEChhHHHHHHHc
Confidence 3455556666654334577899999998877654
No 357
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=25.96 E-value=78 Score=25.42 Aligned_cols=18 Identities=22% Similarity=0.337 Sum_probs=14.7
Q ss_pred EEEEEchhHHHHHHHHhh
Q 024228 115 TLVGVSYGGMVGFKMAEM 132 (270)
Q Consensus 115 ~l~G~S~Gg~~a~~~a~~ 132 (270)
.++|||+|=+.|+.++..
T Consensus 127 ~~~GHSlGE~aA~~~AG~ 144 (343)
T PLN02752 127 VCAGLSLGEYTALVFAGA 144 (343)
T ss_pred eeeeccHHHHHHHHHhCC
Confidence 579999999888877643
No 358
>PF03976 PPK2: Polyphosphate kinase 2 (PPK2); InterPro: IPR022488 This presumed domain is found in one or two copies per protein. The domain is about 230 amino acids in length and has many conserved motifs, it has polyphosphate kinase activity [, ].; PDB: 3CZP_A 3RHF_D 3CZQ_B.
Probab=25.69 E-value=45 Score=25.02 Aligned_cols=37 Identities=14% Similarity=0.023 Sum_probs=24.8
Q ss_pred CceEEEeCCCCCccc-ccHHHHHHHhhcc-ceEEeecCC
Q 024228 45 KHAVVLLHPFGFDGI-LTWQFQVLALAKT-YEVYVPDFL 81 (270)
Q Consensus 45 ~~~vv~~hG~~~~~~-~~~~~~~~~l~~~-~~v~~~d~~ 81 (270)
.|+||++.|+.+++. ..-..+...|..+ ++|.++.-|
T Consensus 30 ~~vlIl~eG~d~sGKg~~I~~l~~~lDPR~~~v~~~~~p 68 (228)
T PF03976_consen 30 IPVLILFEGWDASGKGGTINRLIEWLDPRGFRVHAFGKP 68 (228)
T ss_dssp HEEEEEEEESTTSSHHHHHHHHHCCS-GGGEEEEE-SS-
T ss_pred CcEEEEEeccccCCchHHHHHHHHhCCCCeeEEEeCCCC
Confidence 578999999988877 3334455556556 899988765
No 359
>PF07521 RMMBL: RNA-metabolising metallo-beta-lactamase; InterPro: IPR011108 The metallo-beta-lactamase fold contains five sequence motifs. The first four motifs are found in IPR001279 from INTERPRO and are common to all metallo-beta-lactamases. The fifth motif appears to be specific to function. This entry represents the fifth motif from metallo-beta-lactamases involved in RNA metabolism [].; PDB: 3ZQ4_D 2I7T_A 2I7V_A 2YCB_B 3BK1_A 3T3N_A 3BK2_A 3T3O_A 3AF5_A 3AF6_A ....
Probab=25.46 E-value=1.1e+02 Score=15.72 Aligned_cols=19 Identities=26% Similarity=0.270 Sum_probs=13.3
Q ss_pred HHHHHHHHHHhCCCceEEE
Q 024228 99 AECMAKGLRKLGVEKCTLV 117 (270)
Q Consensus 99 ~~~~~~~l~~~~~~~~~l~ 117 (270)
.+++..+++.+..++++++
T Consensus 20 ~~~L~~~i~~~~p~~vilV 38 (43)
T PF07521_consen 20 REELLEFIEQLNPRKVILV 38 (43)
T ss_dssp HHHHHHHHHHHCSSEEEEE
T ss_pred HHHHHHHHHhcCCCEEEEe
Confidence 4678888888876566554
No 360
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=25.44 E-value=94 Score=30.00 Aligned_cols=24 Identities=29% Similarity=0.443 Sum_probs=19.4
Q ss_pred HHHHHHHHhCCCceEEEEEchhHH
Q 024228 101 CMAKGLRKLGVEKCTLVGVSYGGM 124 (270)
Q Consensus 101 ~~~~~l~~~~~~~~~l~G~S~Gg~ 124 (270)
.+.+++..+++.+=.++|||.|-.
T Consensus 571 aLtDlLs~lgi~PDGIvGHS~GEl 594 (2376)
T KOG1202|consen 571 ALTDLLSCLGIRPDGIVGHSLGEL 594 (2376)
T ss_pred HHHHHHHhcCCCCCcccccccchh
Confidence 456677788999999999999843
No 361
>cd01014 nicotinamidase_related Nicotinamidase_ related amidohydrolases. Cysteine hydrolases of unknown function that share the catalytic triad with other amidohydrolases, like nicotinamidase, which converts nicotinamide to nicotinic acid and ammonia.
Probab=25.25 E-value=1.8e+02 Score=20.05 Aligned_cols=48 Identities=15% Similarity=0.137 Sum_probs=30.3
Q ss_pred HHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCC
Q 024228 101 CMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMG 148 (270)
Q Consensus 101 ~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~ 148 (270)
++.++++..+.+.++++|.+....+...+......-.+-.+..+....
T Consensus 89 ~l~~~L~~~gi~~viv~G~~td~CV~~Ta~~a~~~g~~v~vi~Da~~s 136 (155)
T cd01014 89 DLEEWLREAGIDHLVICGAMTEMCVDTTVRSAFDLGYDVTVVADACAT 136 (155)
T ss_pred CHHHHHHHCCCCEEEEEeeccchhHHHHHHHHHHCCCcEEEecccccC
Confidence 567778888999999999998755543332222122555565555443
No 362
>cd01985 ETF The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The alpha subunit of ETF is structurally related to the bacterial nitrogen fixation protein fixB which could play a role in a redox process and feed electrons to ferredoxin. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=25.16 E-value=2.5e+02 Score=19.88 Aligned_cols=53 Identities=15% Similarity=0.136 Sum_probs=37.4
Q ss_pred ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEEc-hhHHHHHHHHhhC
Q 024228 73 YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVS-YGGMVGFKMAEMY 133 (270)
Q Consensus 73 ~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~G~S-~Gg~~a~~~a~~~ 133 (270)
-.++.++-+. ...++.+.+++.+.++++..+ ..++|+|++ .|+.++.++|.+.
T Consensus 61 d~v~~~~~~~-------~~~~~~~~~a~~l~~~i~~~~-p~~Vl~g~t~~g~~la~rlA~~L 114 (181)
T cd01985 61 DKVLLVEDPA-------LAGYDPEATAKALAALIKKEK-PDLILAGATSIGKQLAPRVAALL 114 (181)
T ss_pred CEEEEEecCc-------ccCCChHHHHHHHHHHHHHhC-CCEEEECCcccccCHHHHHHHHh
Confidence 4666665432 233667888888999888876 577777775 5778888888764
No 363
>cd01013 isochorismatase Isochorismatase, also known as 2,3 dihydro-2,3 dihydroxybenzoate synthase, catalyses the conversion of isochorismate, in the presence of water, to 2,3-dihydroxybenzoate and pyruvate, via the hydrolysis of a vinyl ether, an uncommon reaction in biological systems. Isochorismatase is part of the phenazine biosynthesis pathway. Phenazines are antimicrobial compounds that provide the competitive advantage for certain bacteria.
Probab=24.98 E-value=2.1e+02 Score=20.93 Aligned_cols=51 Identities=12% Similarity=0.143 Sum_probs=33.7
Q ss_pred HHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecccCCCC
Q 024228 100 ECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLT 150 (270)
Q Consensus 100 ~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~~~~~~ 150 (270)
.++..+|+..+.+.++++|.+.-..+..-+...+..-..-.++.++.....
T Consensus 131 T~L~~~Lr~~gi~~lii~Gv~T~~CV~~Ta~~A~~~Gy~v~vv~Da~as~~ 181 (203)
T cd01013 131 SPLLERLKESGRDQLIITGVYAHIGCLSTAVDAFMRDIQPFVVADAIADFS 181 (203)
T ss_pred CCHHHHHHHcCCCEEEEEEeccChhHHHHHHHHHHCCCeEEEeccccCCCC
Confidence 467788899999999999999877664433332222256566666655543
No 364
>PF02633 Creatininase: Creatinine amidohydrolase; InterPro: IPR003785 This family includes the enzymes creatininase and 2-amino-5-formylamino-6-ribosylaminopyrimidin-4(3H)-one 5'-monophosphate deformylase, also known as formamide hydrolase. Creatinase or creatinine amidohydrolase (3.5.2.10 from EC) catalyses the hydrolysis of creatinine to creatine, which can then be metabolised to urea and sarcosine by creatinase (3.5.3.3 from EC). Creatininase is a member of the urease-related amidohydrolase superfamily []. Formamide hydrolase catalyzes the hydrolysis of the formamide of 2-amino-5-formylamino-6-ribosylamino-4(3H)-pyrimidinone 5'-monophosphate (FAPy) to form 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (APy) (3.5.1.102 from EC). ; PDB: 3A6K_F 3A6F_A 3A6D_B 1J2U_B 3A6J_C 1J2T_A 3A6G_C 3A6H_F 1Q3K_E 3A6L_C ....
Probab=24.90 E-value=2.9e+02 Score=20.79 Aligned_cols=69 Identities=14% Similarity=0.155 Sum_probs=33.4
Q ss_pred HHHHHHhhcc-c-eEEeecCCCCCCCCCCCC---C-----CChHHHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhh
Q 024228 63 QFQVLALAKT-Y-EVYVPDFLFFGSSVTDRP---D-----RTASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEM 132 (270)
Q Consensus 63 ~~~~~~l~~~-~-~v~~~d~~g~G~s~~~~~---~-----~~~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~ 132 (270)
..+++.++++ - .++++-++ +|.|..... . .++..+..|+..-+...+.++++++..--|-.-++..+.+
T Consensus 43 ~~~a~~~a~~~~~~lv~P~i~-yG~s~~h~~fpGTisl~~~t~~~~l~di~~sl~~~Gf~~ivivngHgGN~~~l~~~~~ 121 (237)
T PF02633_consen 43 EAVAERAAERLGEALVLPPIP-YGCSPHHMGFPGTISLSPETLIALLRDILRSLARHGFRRIVIVNGHGGNIAALEAAAR 121 (237)
T ss_dssp HHHHHHHHHHHTHEEE---B---BB-GCCTTSTT-BBB-HHHHHHHHHHHHHHHHHHT--EEEEEESSTTHHHHHHHHHH
T ss_pred HHHHHHHHHHCCcEEEeCCCc-cccCcccCCCCCeEEeCHHHHHHHHHHHHHHHHHcCCCEEEEEECCHhHHHHHHHHHH
Confidence 3455666666 4 55665554 555543221 1 2334455566666666789998887655554445555543
No 365
>PRK14974 cell division protein FtsY; Provisional
Probab=24.74 E-value=3.8e+02 Score=21.69 Aligned_cols=63 Identities=14% Similarity=0.092 Sum_probs=36.4
Q ss_pred ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCc--cccccEEEe
Q 024228 73 YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYP--DLVESMVVT 143 (270)
Q Consensus 73 ~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p--~~v~~~i~~ 143 (270)
+.++.+|-.|.... ...+.+.+..+.+......++++.-+.-|.-+..-+..+. -.+.++|+.
T Consensus 223 ~DvVLIDTaGr~~~--------~~~lm~eL~~i~~~~~pd~~iLVl~a~~g~d~~~~a~~f~~~~~~~giIlT 287 (336)
T PRK14974 223 IDVVLIDTAGRMHT--------DANLMDELKKIVRVTKPDLVIFVGDALAGNDAVEQAREFNEAVGIDGVILT 287 (336)
T ss_pred CCEEEEECCCccCC--------cHHHHHHHHHHHHhhCCceEEEeeccccchhHHHHHHHHHhcCCCCEEEEe
Confidence 77888887754432 2344555666666555556666666665655555555442 235666653
No 366
>cd00883 beta_CA_cladeA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=24.72 E-value=1e+02 Score=22.12 Aligned_cols=31 Identities=16% Similarity=0.112 Sum_probs=22.9
Q ss_pred HHHHHHHHHHhCCCceEEEEEchhHHHHHHH
Q 024228 99 AECMAKGLRKLGVEKCTLVGVSYGGMVGFKM 129 (270)
Q Consensus 99 ~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~ 129 (270)
...+.-.+..++.+.++++|||-=|.+...+
T Consensus 68 ~asleyAv~~L~v~~IvV~GHs~CGav~a~~ 98 (182)
T cd00883 68 LSVLQYAVDVLKVKHIIVCGHYGCGGVKAAL 98 (182)
T ss_pred hhhHHHHHHhcCCCEEEEecCCCchHHHHHH
Confidence 4556667788999999999999755554433
No 367
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=24.60 E-value=4.1e+02 Score=22.10 Aligned_cols=73 Identities=11% Similarity=-0.001 Sum_probs=38.2
Q ss_pred CceEEEeCCCCCccc--ccHHHHHHHhhcc-ceEEeecCCCC---CCCCCCCCCCChHHHHHHHHHHHHH--hCCCceEE
Q 024228 45 KHAVVLLHPFGFDGI--LTWQFQVLALAKT-YEVYVPDFLFF---GSSVTDRPDRTASFQAECMAKGLRK--LGVEKCTL 116 (270)
Q Consensus 45 ~~~vv~~hG~~~~~~--~~~~~~~~~l~~~-~~v~~~d~~g~---G~s~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~l 116 (270)
+.++|+++.+..... .....-+..|.+. +.++-+. +|+ |+.. ...-.++++.+..+...+.. +..+++.+
T Consensus 116 ~~pvvi~Pamn~~m~~~p~~~~Nl~~L~~~G~~ii~P~-~g~la~~~~g-~gr~~~~~~I~~~~~~~~~~~~l~gk~vlI 193 (399)
T PRK05579 116 TAPVLVAPAMNTQMWENPATQRNLATLRSRGVEIIGPA-SGRLACGDVG-PGRMAEPEEIVAAAERALSPKDLAGKRVLI 193 (399)
T ss_pred CCCEEEEeCCChhHcCCHHHHHHHHHHHHCCCEEECCC-CccccCCCcC-CCCCCCHHHHHHHHHHHhhhcccCCCEEEE
Confidence 456777765433222 1234456667766 7776554 333 2222 11235667777777666643 33446666
Q ss_pred EEE
Q 024228 117 VGV 119 (270)
Q Consensus 117 ~G~ 119 (270)
.|-
T Consensus 194 TgG 196 (399)
T PRK05579 194 TAG 196 (399)
T ss_pred eCC
Confidence 665
No 368
>PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2.4.1.13 from EC in the following reaction: UDP-glucose + D-fructose = UDP + sucrose This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family IPR001296 from INTERPRO. This enzyme is found mainly in plants but also appears in bacteria.; GO: 0005985 sucrose metabolic process; PDB: 2R60_A 2R66_A 2R68_A 3S27_G 3S29_A 3S28_A.
Probab=24.33 E-value=2.1e+02 Score=24.59 Aligned_cols=40 Identities=18% Similarity=0.100 Sum_probs=27.3
Q ss_pred ChHHHHHHHHH-HHHHhCCCceEEEEE-chhHHHHHHHHhhC
Q 024228 94 TASFQAECMAK-GLRKLGVEKCTLVGV-SYGGMVGFKMAEMY 133 (270)
Q Consensus 94 ~~~~~~~~~~~-~l~~~~~~~~~l~G~-S~Gg~~a~~~a~~~ 133 (270)
.++.+++|+.. +++.++..+-.++|| |=||.+|..++.+.
T Consensus 382 yLe~fa~d~~~~i~~e~~~~PdlI~GnYsDgnlvA~LLs~~l 423 (550)
T PF00862_consen 382 YLEEFADDAEREILAELQGKPDLIIGNYSDGNLVASLLSRKL 423 (550)
T ss_dssp GHHHHHHHHHHHHHHHHTS--SEEEEEHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhCCCCcEEEeccCcchHHHHHHHhhc
Confidence 45667777754 456677778788888 77888888777764
No 369
>KOG3179 consensus Predicted glutamine synthetase [Nucleotide transport and metabolism]
Probab=24.26 E-value=1.6e+02 Score=21.70 Aligned_cols=39 Identities=13% Similarity=0.155 Sum_probs=30.4
Q ss_pred CChHHHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHh
Q 024228 93 RTASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAE 131 (270)
Q Consensus 93 ~~~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~ 131 (270)
++-.+|..-+..+++.+...+.=++|.++|=.+..+++.
T Consensus 73 f~d~dWI~KLcs~~kkld~mkkkvlGICFGHQiiara~G 111 (245)
T KOG3179|consen 73 FSDADWIKKLCSFVKKLDFMKKKVLGICFGHQIIARAKG 111 (245)
T ss_pred cccchHHHHHHHHHHHHHhhccceEEEeccHHHHHHhhC
Confidence 456677777788888887777888999999988876643
No 370
>KOG1752 consensus Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=24.04 E-value=2.1e+02 Score=18.43 Aligned_cols=75 Identities=19% Similarity=0.025 Sum_probs=40.9
Q ss_pred CCceEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHh----CCCceEEEEE
Q 024228 44 KKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKL----GVEKCTLVGV 119 (270)
Q Consensus 44 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~l~G~ 119 (270)
..|.|+|.--+..... ....+...+.-.+.|+-+|...+|. ++...+..+ ....+++-|.
T Consensus 13 ~~~VVifSKs~C~~c~-~~k~ll~~~~v~~~vvELD~~~~g~---------------eiq~~l~~~tg~~tvP~vFI~Gk 76 (104)
T KOG1752|consen 13 ENPVVIFSKSSCPYCH-RAKELLSDLGVNPKVVELDEDEDGS---------------EIQKALKKLTGQRTVPNVFIGGK 76 (104)
T ss_pred cCCEEEEECCcCchHH-HHHHHHHhCCCCCEEEEccCCCCcH---------------HHHHHHHHhcCCCCCCEEEECCE
Confidence 4677777764332222 2222222222237788777653321 333333333 3446788899
Q ss_pred chhHHHHHHHHhhCc
Q 024228 120 SYGGMVGFKMAEMYP 134 (270)
Q Consensus 120 S~Gg~~a~~~a~~~p 134 (270)
+.||.--+.......
T Consensus 77 ~iGG~~dl~~lh~~G 91 (104)
T KOG1752|consen 77 FIGGASDLMALHKSG 91 (104)
T ss_pred EEcCHHHHHHHHHcC
Confidence 999987776665543
No 371
>cd03379 beta_CA_cladeD Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=24.03 E-value=1.3e+02 Score=20.46 Aligned_cols=27 Identities=11% Similarity=0.123 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHhCCCceEEEEEchhH
Q 024228 97 FQAECMAKGLRKLGVEKCTLVGVSYGG 123 (270)
Q Consensus 97 ~~~~~~~~~l~~~~~~~~~l~G~S~Gg 123 (270)
.....+.-.+..++.+.++++||+-=|
T Consensus 41 ~~~~sl~~av~~l~~~~IiV~gHt~Cg 67 (142)
T cd03379 41 DAIRSLVVSVYLLGTREIIVIHHTDCG 67 (142)
T ss_pred hHHHHHHHHHHHhCCCEEEEEeecCCc
Confidence 345566667788899999999997533
No 372
>PRK07877 hypothetical protein; Provisional
Probab=23.86 E-value=2e+02 Score=26.05 Aligned_cols=38 Identities=21% Similarity=0.268 Sum_probs=27.7
Q ss_pred HHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEecc
Q 024228 106 LRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCS 145 (270)
Q Consensus 106 l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~~~ 145 (270)
.+.+...+|.|+|-+.|+.++..+|..- -+..+++++.
T Consensus 102 Q~~L~~~~V~IvG~GlGs~~a~~LaraG--vvG~l~lvD~ 139 (722)
T PRK07877 102 QERLGRLRIGVVGLSVGHAIAHTLAAEG--LCGELRLADF 139 (722)
T ss_pred HHHHhcCCEEEEEecHHHHHHHHHHHcc--CCCeEEEEcC
Confidence 3455667899999998888888777642 1377777765
No 373
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family. Members of this protein family are most closely related to TIGR02764, a subset of polysaccharide deacetylase family proteins found in a species if and only if the species forms endospores like those of Bacillus subtilis or Clostridium tetani. This family is likewise restricted to spore-formers, but is not universal among them in having sequences with full-length matches to the model.
Probab=23.58 E-value=83 Score=24.30 Aligned_cols=32 Identities=19% Similarity=0.264 Sum_probs=20.8
Q ss_pred eEEEeCCCCCcccccHHHHHHHhhcc-ceEEeec
Q 024228 47 AVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPD 79 (270)
Q Consensus 47 ~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d 79 (270)
.||++|....+.. ....+++.|.++ |.++.++
T Consensus 232 ~IILmHd~~~T~~-aL~~iI~~Lk~kGy~fvtl~ 264 (268)
T TIGR02873 232 AMVLMHPTASSTE-GLEEMITIIKEKGYKIGTIT 264 (268)
T ss_pred cEEEEcCCccHHH-HHHHHHHHHHHCCCEEEeHH
Confidence 4677776555544 566667777766 7777654
No 374
>cd07219 Pat_PNPLA1 Patatin-like phospholipase domain containing protein 1. Members of this family share a patatin domain, initially discovered in potato tubers. Some members of PNPLA1 subfamily do not have the lipase consensus sequence Gly-X-Ser-X-Gly which is essential for hydrolase activity. This family includes PNPLA1 from Homo sapiens and Gallus gallus. Currently, there is no literature available on the physiological role, structure, or enzymatic activity of PNPLA1. It is expressed in various human tissues in low mRNA levels.
Probab=23.58 E-value=1.4e+02 Score=24.57 Aligned_cols=19 Identities=16% Similarity=0.177 Sum_probs=16.4
Q ss_pred eEEEEEchhHHHHHHHHhh
Q 024228 114 CTLVGVSYGGMVGFKMAEM 132 (270)
Q Consensus 114 ~~l~G~S~Gg~~a~~~a~~ 132 (270)
-.++|-|.|+.++..++..
T Consensus 46 d~IaGtSAGALvAAl~asG 64 (382)
T cd07219 46 HRVAGTSAGSVIAALVVCG 64 (382)
T ss_pred CeEEEEcHHHHHHHHHHhC
Confidence 3589999999999988875
No 375
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A ....
Probab=23.06 E-value=97 Score=19.93 Aligned_cols=30 Identities=20% Similarity=0.120 Sum_probs=22.3
Q ss_pred EEEeCCCCCcccccHHHHHHHhhcc--ceEEeecC
Q 024228 48 VVLLHPFGFDGILTWQFQVLALAKT--YEVYVPDF 80 (270)
Q Consensus 48 vv~~hG~~~~~~~~~~~~~~~l~~~--~~v~~~d~ 80 (270)
+|++.|.++++. ..+++.|++. +.++..|-
T Consensus 1 vI~I~G~~gsGK---ST~a~~La~~~~~~~i~~d~ 32 (121)
T PF13207_consen 1 VIIISGPPGSGK---STLAKELAERLGFPVISMDD 32 (121)
T ss_dssp EEEEEESTTSSH---HHHHHHHHHHHTCEEEEEHH
T ss_pred CEEEECCCCCCH---HHHHHHHHHHHCCeEEEecc
Confidence 578888888877 3566677765 78888876
No 376
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=22.99 E-value=1.1e+02 Score=19.91 Aligned_cols=32 Identities=25% Similarity=0.432 Sum_probs=23.5
Q ss_pred ceEEEE-EchhHHHHHHHHhhCccccccEEEecc
Q 024228 113 KCTLVG-VSYGGMVGFKMAEMYPDLVESMVVTCS 145 (270)
Q Consensus 113 ~~~l~G-~S~Gg~~a~~~a~~~p~~v~~~i~~~~ 145 (270)
++.|+| ..+.|.-.+++...+|+ ++-+.+++.
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~-~e~~~~~~~ 33 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPD-FELVALVSS 33 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTST-EEEEEEEES
T ss_pred CEEEECCCCHHHHHHHHHHhcCCC-ccEEEeeee
Confidence 578888 78888888888888875 665554443
No 377
>KOG2214 consensus Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=22.45 E-value=47 Score=28.06 Aligned_cols=32 Identities=13% Similarity=0.163 Sum_probs=24.8
Q ss_pred CCCceEEEEEchhHHHHHHHHhhCccccccEE
Q 024228 110 GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMV 141 (270)
Q Consensus 110 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i 141 (270)
+.-|=++.|.|+||.+|..++.+.-+.++.+.
T Consensus 200 dLlP~IIsGsS~GaivAsl~~v~~~eEl~~Ll 231 (543)
T KOG2214|consen 200 DLLPNIISGSSAGAIVASLVGVRSNEELKQLL 231 (543)
T ss_pred cccchhhcCCchhHHHHHHHhhcchHHHHHHh
Confidence 44577889999999999999888765565544
No 378
>TIGR02683 upstrm_HI1419 probable addiction module killer protein. Members of this strictly bacterial protein family are small, at roughly 100 amino acids. The gene is almost invariably the upstream member of a gene pair, where the downstream member is a predicted DNA-binding protein from a clade within Pfam helix-turn-helix family pfam01381. These gene pairs, when found on the bacterial chromosome, often are located with prophage regions, but also in both integrated plasmid regions and near housekeeping genes. Analysis suggests that the gene pair may serve as an addiction module.
Probab=22.41 E-value=2.1e+02 Score=17.83 Aligned_cols=31 Identities=19% Similarity=0.142 Sum_probs=17.3
Q ss_pred eEEEeecCCeEEEEEecCCCCCCceEEEeCCCCCc
Q 024228 23 QRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFD 57 (270)
Q Consensus 23 ~~~i~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~ 57 (270)
+-.+.+.++.++.|...+ +..+|++||+.=.
T Consensus 49 ElR~r~g~~yRiif~~~~----~~~vvll~gf~Kk 79 (95)
T TIGR02683 49 ELRIDFGPGYRVYFTQRG----KVIILLLCGGDKS 79 (95)
T ss_pred EEEecCCCCEEEEEEEEC----CEEEEEEeCEecc
Confidence 333444335556544332 4578899986643
No 379
>PRK03363 fixB putative electron transfer flavoprotein FixB; Provisional
Probab=22.39 E-value=2.5e+02 Score=22.44 Aligned_cols=53 Identities=21% Similarity=0.171 Sum_probs=37.9
Q ss_pred ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEEch-hHHHHHHHHhhC
Q 024228 73 YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVSY-GGMVGFKMAEMY 133 (270)
Q Consensus 73 ~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~G~S~-Gg~~a~~~a~~~ 133 (270)
-.|+..|.+. ..++.+.+++.+.++++..+...++|+|+|. |--++-++|.+.
T Consensus 50 d~V~~~~~~~--------~~~~~e~~~~al~~~i~~~~p~~~vl~~~T~~Gr~laprlAa~l 103 (313)
T PRK03363 50 NHVWKLSGKP--------DDRMIEDYAGVMADTIRQHGADGLVLLPNTRRGKLLAAKLGYRL 103 (313)
T ss_pred CEEEEecCcc--------cccChHHHHHHHHHHHHhhCCCcEEEEcCCccHHHHHHHHHHHh
Confidence 4677776541 1266788888899988886644688888875 667788887764
No 380
>PF07812 TfuA: TfuA-like protein; InterPro: IPR012924 This domain consists of a group of sequences that are similar to the core of TfuA protein (Q52872 from SWISSPROT). This protein is involved in the production of trifolitoxin (TFX), a gene-encoded, post-translationally modified peptide antibiotic []. The role of TfuA in TFX synthesis is unknown, and it may be involved in other cellular processes [].
Probab=22.05 E-value=1.6e+02 Score=19.50 Aligned_cols=28 Identities=18% Similarity=0.111 Sum_probs=17.0
Q ss_pred HHHHHhCCCceEEEEEchhHHHHHHHHh
Q 024228 104 KGLRKLGVEKCTLVGVSYGGMVGFKMAE 131 (270)
Q Consensus 104 ~~l~~~~~~~~~l~G~S~Gg~~a~~~a~ 131 (270)
+++..+...-.++-+-|||+.=|..+..
T Consensus 14 EIL~Al~~Gv~V~GasSMGALRAaEl~~ 41 (120)
T PF07812_consen 14 EILWALSQGVRVFGASSMGALRAAELAP 41 (120)
T ss_pred HHHHHHHCCCEEEecccHHHHHHHHhHh
Confidence 3444454344555677899877766653
No 381
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=22.00 E-value=4.8e+02 Score=21.89 Aligned_cols=98 Identities=16% Similarity=0.005 Sum_probs=50.3
Q ss_pred ceEEEeCCCCCcccccHHHHHHHhhcc-ceEEeecCCCCCCCCCCC---CC---CChHHHHHHHHHHHHHhCCCceEEEE
Q 024228 46 HAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDR---PD---RTASFQAECMAKGLRKLGVEKCTLVG 118 (270)
Q Consensus 46 ~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~---~~---~~~~~~~~~~~~~l~~~~~~~~~l~G 118 (270)
..++++--..+..+ .-....+.+.+. +-|+-.|..++=.--... .. .+++.+.+++......-....-+|.|
T Consensus 49 ~~villSd~~G~~d-~~~s~a~al~~~~Alv~~vd~~~ylaaL~~dd~ecvylisd~Ealsr~~Qr~a~~g~yr~PVl~g 127 (456)
T COG3946 49 GLVILLSDEAGIGD-QERSRADALLARGALVAPVDLGAYLAALGADDNECVYLISDFEALSREAQRAADLGVYRLPVLTG 127 (456)
T ss_pred eeeEEEEcccChhh-hhcchhHHHhhcCCeeeccccchhhhccccCCCcceEEehhHHHHhHHHHHHhhccCcccceEee
Confidence 34444443333333 223445566555 888888876542211111 11 23333333333222221233467888
Q ss_pred EchhHHHHHHHHhhCcc-ccccEEEec
Q 024228 119 VSYGGMVGFKMAEMYPD-LVESMVVTC 144 (270)
Q Consensus 119 ~S~Gg~~a~~~a~~~p~-~v~~~i~~~ 144 (270)
---||.+++..+++.|+ .+.+.+-+.
T Consensus 128 ~g~Gg~~A~asaaqSp~atlag~Vsld 154 (456)
T COG3946 128 PGQGGTLAYASAAQSPDATLAGAVSLD 154 (456)
T ss_pred cCCCcHHHHHHHhhChhhhhcCccCCC
Confidence 99999999999888765 344444433
No 382
>KOG0781 consensus Signal recognition particle receptor, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=21.87 E-value=4.5e+02 Score=22.68 Aligned_cols=63 Identities=16% Similarity=0.169 Sum_probs=40.1
Q ss_pred ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhC---------ccccccEEEe
Q 024228 73 YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMY---------PDLVESMVVT 143 (270)
Q Consensus 73 ~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~---------p~~v~~~i~~ 143 (270)
|.|+.+|--|.-... ..+...+..+++.-..+.++.+|.-+=|.=++.-+..+ |..|+++++.
T Consensus 467 fDVvLiDTAGR~~~~--------~~lm~~l~k~~~~~~pd~i~~vgealvg~dsv~q~~~fn~al~~~~~~r~id~~~lt 538 (587)
T KOG0781|consen 467 FDVVLIDTAGRMHNN--------APLMTSLAKLIKVNKPDLILFVGEALVGNDSVDQLKKFNRALADHSTPRLIDGILLT 538 (587)
T ss_pred CCEEEEeccccccCC--------hhHHHHHHHHHhcCCCceEEEehhhhhCcHHHHHHHHHHHHHhcCCCccccceEEEE
Confidence 999999977643322 33455666677766777888888877666655544332 3346666653
No 383
>PRK00131 aroK shikimate kinase; Reviewed
Probab=21.84 E-value=1.1e+02 Score=21.17 Aligned_cols=32 Identities=28% Similarity=0.190 Sum_probs=21.6
Q ss_pred CceEEEeCCCCCcccccHHHHHHHhhcc--ceEEeec
Q 024228 45 KHAVVLLHPFGFDGILTWQFQVLALAKT--YEVYVPD 79 (270)
Q Consensus 45 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~--~~v~~~d 79 (270)
.+.+|++.|.+++.. ..++..|++. +.++-.|
T Consensus 3 ~~~~i~l~G~~GsGK---stla~~La~~l~~~~~d~d 36 (175)
T PRK00131 3 KGPNIVLIGFMGAGK---STIGRLLAKRLGYDFIDTD 36 (175)
T ss_pred CCCeEEEEcCCCCCH---HHHHHHHHHHhCCCEEECh
Confidence 456889999888877 4556666665 5555444
No 384
>PLN03006 carbonate dehydratase
Probab=21.66 E-value=1.2e+02 Score=23.88 Aligned_cols=29 Identities=21% Similarity=0.290 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHhCCCceEEEEEchhHHHH
Q 024228 98 QAECMAKGLRKLGVEKCTLVGVSYGGMVG 126 (270)
Q Consensus 98 ~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a 126 (270)
....|.-.+..++.+.|+|+|||-=|.+.
T Consensus 158 ~~aSLEYAV~~L~V~~IVV~GHs~CGaV~ 186 (301)
T PLN03006 158 TKAALEFSVNTLNVENILVIGHSRCGGIQ 186 (301)
T ss_pred hhhhHHHHHHHhCCCEEEEecCCCchHHH
Confidence 34567777888999999999999744444
No 385
>PF03575 Peptidase_S51: Peptidase family S51; InterPro: IPR005320 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S51 (clan PC(S)). The type example being dipeptidase E (alpha-aspartyl dipeptidase) from Escherichia coli. The family contains alpha-aspartyl dipeptidases (dipeptidase E) and cyanophycinases. The three-dimensional structure of Salmonella typhimurium aspartyl dipeptidase, peptidase E has been determine at 1.2-A resolution. The structure of this 25kDa enzyme consists of two mixed beta-sheets forming a V, flanked by six alpha-helices. The active site contains a Ser-His-Glu catalytic triad and is the first example of a serine peptidase/protease with a glutamate in the catalytic triad. The active site Ser is located on a strand-helix motif reminiscent of that found in alpha/beta-hydrolases, but the polypeptide fold and the organisation of the catalytic triad differ from those of the known serine proteases. This enzyme appears to represent a new example of convergent evolution of peptidase activity []. Alpha-aspartyl dipeptidase hydrolyses dipeptides containing N-terminal aspartate residues, asp-|-xaa. It does not act on peptides with N-terminal Glu, Asn or Gln, nor does it cleave isoaspartyl peptides. In the cyanobacteria, cyanophycinase is an exopeptidase that catalyses the hydrolytic cleavage of multi-l-arginyl-poly-l-aspartic acid (cyanophycin; a water- insoluble reserve polymer) into aspartate-arginine dipeptides.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3EN0_B 1FYE_A 1FY2_A 3L4E_A.
Probab=21.60 E-value=55 Score=22.60 Aligned_cols=13 Identities=31% Similarity=0.529 Sum_probs=11.2
Q ss_pred eEEEEEchhHHHH
Q 024228 114 CTLVGVSYGGMVG 126 (270)
Q Consensus 114 ~~l~G~S~Gg~~a 126 (270)
.+++|.|.|++++
T Consensus 70 ~vi~G~SAGA~i~ 82 (154)
T PF03575_consen 70 GVIIGTSAGAMIL 82 (154)
T ss_dssp SEEEEETHHHHCT
T ss_pred CEEEEEChHHhhc
Confidence 7889999999773
No 386
>KOG0744 consensus AAA+-type ATPase [Posttranslational modification, protein turnover, chaperones]
Probab=21.45 E-value=1.4e+02 Score=24.11 Aligned_cols=34 Identities=24% Similarity=0.182 Sum_probs=23.4
Q ss_pred eEEEeCCCCCcccccHHHHHHHhhccceEEeecCCCC
Q 024228 47 AVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFF 83 (270)
Q Consensus 47 ~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~ 83 (270)
-+|++||=+|++. ..++..|+++..+-+.|.--+
T Consensus 178 RliLlhGPPGTGK---TSLCKaLaQkLSIR~~~~y~~ 211 (423)
T KOG0744|consen 178 RLILLHGPPGTGK---TSLCKALAQKLSIRTNDRYYK 211 (423)
T ss_pred eEEEEeCCCCCCh---hHHHHHHHHhheeeecCcccc
Confidence 4899999999877 456777777655555554333
No 387
>PF00484 Pro_CA: Carbonic anhydrase; InterPro: IPR001765 Carbonic anhydrases (4.2.1.1 from EC) (CA) are zinc metalloenzymes which catalyze the reversible hydration of carbon dioxide. In Escherichia coli, CA (gene cynT) is involved in recycling carbon dioxide formed in the bicarbonate-dependent decomposition of cyanate by cyanase (gene cynS). By this action, it prevents the depletion of cellular bicarbonate []. In photosynthetic bacteria and plant chloroplast, CA is essential to inorganic carbon fixation []. Prokaryotic and plant chloroplast CA are structurally and evolutionary related and form a family distinct from the one which groups the many different forms of eukaryotic CA's (see IPR001148 from INTERPRO). Hypothetical proteins yadF from Escherichia coli and HI1301 from Haemophilus influenzae also belong to this family. This family also includes, YbcF and related proteins, which are inactive homologues of bacterial carbonic anhydrase.; GO: 0004089 carbonate dehydratase activity, 0008270 zinc ion binding; PDB: 1DDZ_B 3LAS_A 2W3N_A 2W3Q_A 1G5C_F 3E2A_A 3E2X_B 2A8C_A 2A8D_D 3E3F_A ....
Probab=21.23 E-value=2.8e+02 Score=18.96 Aligned_cols=32 Identities=16% Similarity=0.227 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHHhCCCceEEEEEchhHHHHH
Q 024228 96 SFQAECMAKGLRKLGVEKCTLVGVSYGGMVGF 127 (270)
Q Consensus 96 ~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~ 127 (270)
......+.-.+..++.+.++++||+-=|.+..
T Consensus 39 ~~~~~sle~av~~l~v~~IiV~gHt~CGa~~~ 70 (153)
T PF00484_consen 39 DSALASLEYAVYHLGVKEIIVCGHTDCGAIKA 70 (153)
T ss_dssp HHHHHHHHHHHHTST-SEEEEEEETT-HHHHH
T ss_pred cchhhheeeeeecCCCCEEEEEcCCCchHHHH
Confidence 34455666677888999999999997555553
No 388
>PLN02925 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
Probab=20.94 E-value=3.1e+02 Score=24.72 Aligned_cols=41 Identities=7% Similarity=-0.041 Sum_probs=24.3
Q ss_pred ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEE
Q 024228 73 YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVG 118 (270)
Q Consensus 73 ~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~G 118 (270)
+..-.+..||+|++. ++++..+..+.+...++..-++.++|
T Consensus 630 ~kte~isCPgCGRT~-----~dlq~~~~~I~~~~~hl~GvkiavMG 670 (733)
T PLN02925 630 TKTEYVSCPSCGRTL-----FDLQEVSAEIREKTSHLPGVSIAIMG 670 (733)
T ss_pred cCCeEEECCCCCCcc-----ccHHHHHHHHHHHhhcCCCceEEEEe
Confidence 444455567777655 44666667776666666544555554
No 389
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=20.88 E-value=54 Score=27.45 Aligned_cols=52 Identities=15% Similarity=0.114 Sum_probs=31.9
Q ss_pred eEEEcCCCccCCHHHHHHHHHHhcCCceEEEecCCCcceeecchHhHHHHHHHHHHh
Q 024228 205 HLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILAS 261 (270)
Q Consensus 205 l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 261 (270)
-+++|+.|..|+.+.++... +. ....+.++ +.|..++.+++ +.+.|..||+.
T Consensus 370 ~~~y~dGDGTV~~~S~~~~~--~~-~~~~~~l~-~~H~~il~n~~-v~~~I~~fL~~ 421 (440)
T PLN02733 370 EYTYVDGDGTVPVESAKADG--LN-AVARVGVP-GDHRGILRDEH-VFRILKHWLKV 421 (440)
T ss_pred eEEEeCCCCEEecchhhccC--cc-ccccccCC-chHHHHhcCHH-HHHHHHHHHhc
Confidence 34455666667655544221 11 33445555 78998887655 77999999964
No 390
>COG0218 Predicted GTPase [General function prediction only]
Probab=20.87 E-value=3.5e+02 Score=19.93 Aligned_cols=69 Identities=19% Similarity=0.208 Sum_probs=35.2
Q ss_pred EEEEecCCCCCCceEEEeCCCCCccc-----ccHHHHH-HHhhcc----ceEEeecCCCCCCCCCCCCCCChHHHHHHHH
Q 024228 34 LNIWVPKKTTKKHAVVLLHPFGFDGI-----LTWQFQV-LALAKT----YEVYVPDFLFFGSSVTDRPDRTASFQAECMA 103 (270)
Q Consensus 34 l~~~~~~~~~~~~~vv~~hG~~~~~~-----~~~~~~~-~~l~~~----~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~ 103 (270)
+.|+...+ +-.+|=++|+|-... ..|..++ ++|..+ .-|+.+|.| |+ +...-..+.
T Consensus 63 iNff~~~~---~~~lVDlPGYGyAkv~k~~~e~w~~~i~~YL~~R~~L~~vvlliD~r-~~----------~~~~D~em~ 128 (200)
T COG0218 63 INFFEVDD---ELRLVDLPGYGYAKVPKEVKEKWKKLIEEYLEKRANLKGVVLLIDAR-HP----------PKDLDREMI 128 (200)
T ss_pred eEEEEecC---cEEEEeCCCcccccCCHHHHHHHHHHHHHHHhhchhheEEEEEEECC-CC----------CcHHHHHHH
Confidence 44555444 345666778775542 3555544 445443 456667765 21 111222555
Q ss_pred HHHHHhCCCceEE
Q 024228 104 KGLRKLGVEKCTL 116 (270)
Q Consensus 104 ~~l~~~~~~~~~l 116 (270)
+++.+.+..-+++
T Consensus 129 ~~l~~~~i~~~vv 141 (200)
T COG0218 129 EFLLELGIPVIVV 141 (200)
T ss_pred HHHHHcCCCeEEE
Confidence 6666666544333
No 391
>PLN02777 photosystem I P subunit (PSI-P)
Probab=20.68 E-value=80 Score=22.12 Aligned_cols=60 Identities=8% Similarity=0.170 Sum_probs=39.7
Q ss_pred CCCCCCCCCCCChHHHHHHHHHHHHHhCCCceEEEEEchhHHHHHHHHhhCccccccEEEe
Q 024228 83 FGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVT 143 (270)
Q Consensus 83 ~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i~~ 143 (270)
.|++.........++..+++.+.-+... ++..++|.-.||.+++.....-=+-|+.+=++
T Consensus 64 ~ge~s~~~~~~~~~ei~k~~~e~Wd~~E-dK~av~~l~~aaiVal~v~~~VL~AId~lPLl 123 (167)
T PLN02777 64 TGEAPAEVETTELPEIVKTVQEAWDKVE-DKYAVSSLAFAGVVALWGSAGMISAIDRLPLV 123 (167)
T ss_pred ccCCCcccccccHHHHHHHHHHHHhhhc-chhHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 3666554445566778888887777765 57778888899999988665432334444343
No 392
>PF02540 NAD_synthase: NAD synthase; InterPro: IPR022310 NAD+ synthase (6.3.5.1 from EC) catalyzes the last step in the biosynthesis of nicotinamide adenine dinucleotide and is induced by stress factors such as heat shock and glucose limitation. The three-dimensional structure of NH3-dependent NAD+ synthetase from Bacillus subtilis, in its free form and in complex with ATP shows that the enzyme consists of a tight homodimer with alpha/beta subunit topology []. Catalyzes the synthesis of GMP from XMP. The protein is a homodimer, but in the archaea it is a heterodimer composed of a glutamine amidotransferase subunit (A) and a GMP-binding subunit (B). This entry contains the GMP-binding subunit (B). ; PDB: 2VXO_A 3UOW_B 3N05_A 2DPL_B 3A4I_A 3SEQ_D 3SZG_A 3SYT_A 3SDB_A 3SEZ_C ....
Probab=20.52 E-value=3.9e+02 Score=20.31 Aligned_cols=47 Identities=26% Similarity=0.323 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHHhCCCceEEEEEchh--HHHHHHHHhh-C-ccccccEEEe
Q 024228 96 SFQAECMAKGLRKLGVEKCTLVGVSYG--GMVGFKMAEM-Y-PDLVESMVVT 143 (270)
Q Consensus 96 ~~~~~~~~~~l~~~~~~~~~l~G~S~G--g~~a~~~a~~-~-p~~v~~~i~~ 143 (270)
+..+..+.+.++..+. +=+++|.|-| ..+++.+|.+ . ++++-++++-
T Consensus 3 ~~l~~~L~~~~~~~g~-~~vVvglSGGiDSav~A~La~~Alg~~~v~~v~mp 53 (242)
T PF02540_consen 3 EALVDFLRDYVKKSGA-KGVVVGLSGGIDSAVVAALAVKALGPDNVLAVIMP 53 (242)
T ss_dssp HHHHHHHHHHHHHHTT-SEEEEEETSSHHHHHHHHHHHHHHGGGEEEEEEEE
T ss_pred HHHHHHHHHHHHHhCC-CeEEEEcCCCCCHHHHHHHHHHHhhhccccccccc
Confidence 4556777777887775 4566899998 3444444443 2 5667766664
No 393
>PF00091 Tubulin: Tubulin/FtsZ family, GTPase domain; InterPro: IPR003008 This domain is found in all tubulin chains, as well as the bacterial FtsZ family of proteins. These proteins are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases, this entry is the GTPase domain. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea.; GO: 0051258 protein polymerization, 0043234 protein complex; PDB: 3E22_B 1SA1_D 3DU7_B 2P4N_B 3DCO_B 1Z2B_D 1SA0_B 2XRP_C 1TVK_B 2BTQ_B ....
Probab=20.37 E-value=2.8e+02 Score=20.51 Aligned_cols=16 Identities=19% Similarity=0.092 Sum_probs=11.2
Q ss_pred CCCceEEEEEchhHHH
Q 024228 110 GVEKCTLVGVSYGGMV 125 (270)
Q Consensus 110 ~~~~~~l~G~S~Gg~~ 125 (270)
+.-..+++-||+||..
T Consensus 122 d~~~~~~i~~slgGGT 137 (216)
T PF00091_consen 122 DSLDGFFIVHSLGGGT 137 (216)
T ss_dssp TTESEEEEEEESSSSH
T ss_pred cccccceeccccccee
Confidence 4446788888887653
No 394
>PF09825 BPL_N: Biotin-protein ligase, N terminal; InterPro: IPR019197 The function of this structural domain is unknown. It is found to the N terminus of the biotin protein ligase catalytic domain []. Biotin protein ligase carries out the post-translational modification of specific proteins by the attachment of biotin. It acts on various carboxylases such as acetyl-CoA-carboxylase, pyruvate carboxylase, propionyl CoA carboxylase, and 3-methylcrotonyl CoA carboxylase.
Probab=20.37 E-value=3.8e+02 Score=22.01 Aligned_cols=31 Identities=16% Similarity=0.162 Sum_probs=19.2
Q ss_pred EEEeCCCCCcccccHHHHHHHh----hccceEEeec
Q 024228 48 VVLLHPFGFDGILTWQFQVLAL----AKTYEVYVPD 79 (270)
Q Consensus 48 vv~~hG~~~~~~~~~~~~~~~l----~~~~~v~~~d 79 (270)
|++..|-+.+.. .....+..| ...|.|..++
T Consensus 3 VlVY~G~G~~~~-sv~~~~~~Lr~~l~p~y~V~~v~ 37 (367)
T PF09825_consen 3 VLVYNGPGTSPE-SVRHTLESLRRLLSPHYAVIPVT 37 (367)
T ss_pred EEEEecCCCCHH-HHHHHHHHHHHhcCCCeEEEEeC
Confidence 666677776666 555554443 3348887776
No 395
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=20.20 E-value=77 Score=22.76 Aligned_cols=32 Identities=19% Similarity=0.199 Sum_probs=17.9
Q ss_pred eEEEeCCCC---CcccccHHHHHHHhhcc-ceEEeec
Q 024228 47 AVVLLHPFG---FDGILTWQFQVLALAKT-YEVYVPD 79 (270)
Q Consensus 47 ~vv~~hG~~---~~~~~~~~~~~~~l~~~-~~v~~~d 79 (270)
.||++|... .+.. ....+++.|.++ |+++.++
T Consensus 153 ~Iil~Hd~~~~~~t~~-~l~~~i~~l~~~Gy~~vtl~ 188 (191)
T TIGR02764 153 DIILLHASDSAKQTVK-ALPTIIKKLKEKGYEFVTIS 188 (191)
T ss_pred CEEEEeCCCCcHhHHH-HHHHHHHHHHHCCCEEEEHH
Confidence 477778421 2222 445566666666 7777653
No 396
>cd07199 Pat17_PNPLA8_PNPLA9_like Patatin-like phospholipase; includes PNPLA8, PNPLA9, and Pat17. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=20.12 E-value=84 Score=23.95 Aligned_cols=18 Identities=28% Similarity=0.512 Sum_probs=15.9
Q ss_pred EEEEEchhHHHHHHHHhh
Q 024228 115 TLVGVSYGGMVGFKMAEM 132 (270)
Q Consensus 115 ~l~G~S~Gg~~a~~~a~~ 132 (270)
.+.|-|.||.+|+.++..
T Consensus 37 ~i~GtS~G~iia~~l~~~ 54 (258)
T cd07199 37 LIAGTSTGGIIALGLALG 54 (258)
T ss_pred eeeeccHHHHHHHHHhcC
Confidence 478999999999998876
Done!